Citrus Sinensis ID: 019878

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330----
Protein Sequence
MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPRSLKEGLQEVLPWLRSSGMIKY
Secondary Structure (PSIPRED)
cEEEEEccccHHHHHHHHHHHHcccEEEEEEccccccccccccccEEEEEcccccHHHHHHHHccccEEEEccEEcccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccEEEEEcccEEcccccccccHHHHHHHHHHcccccEEEccccccccEEcHHHHHHHHHHHHccccccccEEEccccccHHHHHHHHHHHHcccccEEEccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHccccccHHHHHHHHccccccHHHHHHHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
cEEEEEccHHHHHHHHHHHHHHcccEEEEEEcccHHHHcccccccEEEEEEEcccHHHHHHHHccccEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEccHEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEccccccccccccccHHHHHHHHHHccccccEEccccccccEEEHHHHHHHHHHHHHccccccEEEEcccccHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHcccccccccccccccccccEEEEcHHHHHHHHccccccHHHHHHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
mkilvsgasgylgGRLCHALLKQGHSVRALVRrtsdisglpsegaleLVYGDVTDYRSLVDACFGCHVIFHTaalvepwlpdpsrffAVNVEGLKNVVQAAKETKTVEKIIYTSSffalgstdgyiadenqVHEEKYFCTQYERSKAVADKIALQAAseglpivpvypgviygpgklttGNLVAKLMIERFngrlpgyigygndrfsfchvddvvDGHIAAMEKGrsgerylltgenasfmQIFDMAAVItgtsrprfciPLWLIEAYGWILVFFSRitgklplisyptVHVLAHQWAYSCVKAktelgynprslKEGLQEVLPWLRSSGMIKY
Flexible Loop (DISEMBL)
MKILVSGASGYLGGRLCHALLKQGHSVRALVRRtsdisglpsegALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGynprslkeglqevlpwlrssgmiky
Low Complexity Region (SEG)
MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPRSLKEGLQEVLPWLRSSGMIKY
Disordered region (IsUnstruct)
***LVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPRSLKEGLQEVLPWL********
Disordered Region (DISOPRED)
MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPRSLKEGLQEVLPWLRSSGMIK*
Disordered Region (DISEMBL)
MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPRSLKEGLQEVLPWLRSSGMIKY
Disordered Region (DISPRO)
MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPRSLKEGLQEVLPWLRSSGMIKY
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPRSLKEGLQEVLPWLRSSGMIKY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	334	2.2.26 [Sep-21-2011]
P73212	343	Putative dihydroflavonol-	N/A	no	0.949	0.924	0.316	1e-38
O53454	370	3 beta-hydroxysteroid deh	no	no	0.931	0.840	0.286	1e-21
A8DZE7	387	Short-chain dehydrogenase	no	no	0.925	0.798	0.270	9e-19
P51105	366	Dihydroflavonol-4-reducta	N/A	no	0.793	0.724	0.262	2e-17
Q0IH73	386	Short-chain dehydrogenase	N/A	no	0.952	0.823	0.250	6e-17
P55584	356	Uncharacterized protein y	yes	no	0.934	0.876	0.280	9e-17
Q9SEV0	340	Anthocyanidin reductase O	no	no	0.730	0.717	0.288	3e-16
P14721	446	Dihydroflavonol-4-reducta	N/A	no	0.751	0.562	0.269	3e-16
Q9FX01	439	3beta-hydroxysteroid-dehy	no	no	0.922	0.701	0.273	4e-16
Q4R7R1	393	Short-chain dehydrogenase	N/A	no	0.916	0.778	0.265	2e-15

>sp|P73212|DFRA_SYNY3 Putative dihydroflavonol-4-reductase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=dfrA PE=3 SV=1

 Score =  160 bits (406), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/341 (31%), Positives = 169/341 (49%), Gaps = 24/341 (7%)

Query: 4   LVSGASGYLGGRLCHALLKQGHSVRALVR---RTSDISGLPSEGALELVYGDVTDYRSLV 60
            V+G +G++G  L   LL+QG+ VRALVR   R  ++  LP    ++ V GD+ D   L 
Sbjct: 14  FVTGGTGFVGANLVRHLLEQGYQVRALVRASSRPDNLQNLP----IDWVVGDLND-GDLH 68

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
               GC  +FH AA    W  D    +  NV G +N++  A++   +E+ +YTSS  A+G
Sbjct: 69  QQMQGCQGLFHVAAHYSLWQKDREALYRSNVLGTRNILACAQKAG-IERTVYTSSVAAIG 127

Query: 121 -STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLT- 178
              DG  ADE+     +     Y++SK  A++ AL AA +G  IV V P    GP  +  
Sbjct: 128 VKGDGQRADESYQSPVEKLIGAYKQSKYWAEQEALTAAQQGQDIVIVNPSTPIGPWDIKP 187

Query: 179 --TGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRS----GERYL 232
             TG ++ + +  +    +P Y+  G    +   V DV  GH+ A ++G++    G+RY+
Sbjct: 188 TPTGEIILRFLRRQ----MPAYVNTG---LNLIDVRDVAAGHLLAWQRGKTALTRGDRYI 240

Query: 233 LTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHV 292
           L  EN S   I    + ITG   P+  +PLWL   + W+        G+ P +    V +
Sbjct: 241 LGHENISLQGILAHLSTITGLPAPKNTVPLWLPLTFAWVEEKVLAPLGRSPSVPMDGVKM 300

Query: 293 LAHQWAYSCVKAKTELGYNPRSLKEGLQEVLPWLRSSGMIK 333
            A +  Y   KA  ELG    S+K+ L + + W ++ G +K
Sbjct: 301 SAQEMYYDASKAVQELGLPQSSIKQALADAVHWFQNHGYVK 341

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 1EC: 9

>sp|O53454|3BHS_MYCTU 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase OS=Mycobacterium tuberculosis GN=Rv1106c PE=1 SV=1

 Score =  104 bits (259), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 161/345 (46%), Gaps = 34/345 (9%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           ++LV+G +G++G  L   LL +GH VR+  R  S    LP+   LE++ GD+TD      
Sbjct: 16  RVLVTGGAGFVGANLVTTLLDRGHWVRSFDRAPSL---LPAHPQLEVLQGDITDADVCAA 72

Query: 62  ACFGCHVIFHTAALVE----PWLPDP--SRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
           A  G   IFHTAA++E      + D    R FAVNV G +N++ A +    V++ +YTSS
Sbjct: 73  AVDGIDTIFHTAAIIELMGGASVTDEYRQRSFAVNVGGTENLLHAGQRAG-VQRFVYTSS 131

Query: 116 -FFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIAL-QAASEGLPIVPVYPGVIYG 173
               +G  +    DE   + ++ F   Y  +K VA++  L Q   +G+    + P  I+G
Sbjct: 132 NSVVMGGQNIAGGDETLPYTDR-FNDLYTETKVVAERFVLAQNGVDGMLTCAIRPSGIWG 190

Query: 174 PGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAM-----EKGRSG 228
            G  T   +  KL      G +   +G  + R    +V +++ G I A      +    G
Sbjct: 191 NGDQT---MFRKLFESVLKGHVKVLVGRKSARLDNSYVHNLIHGFILAAAHLVPDGTAPG 247

Query: 229 ERYLLTGENASFMQIFDMAAVI---TGTSRPRFCIP----LWLIEAYGWILVFFSRITGK 281
           + Y +   +A  + +F+ A  +    G   P+  I      W++   GW  + F R    
Sbjct: 248 QAYFIN--DAEPINMFEFARPVLEACGQRWPKMRISGPAVRWVMT--GWQRLHF-RFGFP 302

Query: 282 LPLISYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPW 325
            PL+    V  L     +S  KA+ +LGY P  + ++ L E LP+
Sbjct: 303 APLLEPLAVERLYLDNYFSIAKARRDLGYEPLFTTQQALTECLPY 347

3-beta-HSD is a bifunctional enzyme, that catalyzes the oxidation and isomerization of cholesterol, pregnenolone, and dehydroepiandrosterone (DHEA) into cholest-4-en-3-one, progesterone, and androsterone, respectively.

Mycobacterium tuberculosis (taxid: 1773)

EC: 5

EC: .

EC: 3

EC: .

EC: 3

EC: .

EC: 1

>sp|A8DZE7|D42E1_DANRE Short-chain dehydrogenase/reductase family 42E member 1 OS=Danio rerio GN=sdr42e1 PE=2 SV=1

 Score = 94.7 bits (234), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 158/359 (44%), Gaps = 50/359 (13%)

Query: 4   LVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC 63
           L++G  GY G RL  ALLK    V  L   +  I  LP    L  +  D+ DY  +  A 
Sbjct: 11  LITGGGGYFGFRLACALLKTSSKV-VLFDVSPPIQDLPE--GLIFMRADIRDYAQVEKAV 67

Query: 64  FGCHVIFHTAALVEPWLPDPSRFF--AVNVEGLKNVVQAAKETKTVEKIIYTSSF-FALG 120
            G H +FH A+         +R     VNV+G +N+++A     +V ++IYTS+F    G
Sbjct: 68  RGSHCVFHIASYGMSGREQLNRKLIEEVNVKGTENILRACV-AHSVPRLIYTSTFNVVFG 126

Query: 121 STDGYIADEN------QVHEEKYFCTQY--ERSKAVADKIALQAASEGLPIVPVYPGVIY 172
             +    DE+       +H + Y  T+   E     A+ +AL  ++  L    + P  IY
Sbjct: 127 GQEIKNGDESLPYLPLHLHPDHYSRTKSIAEMQVLKANNLALSNSTGVLRTCALRPAGIY 186

Query: 173 GPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRF---------SFCHVDDVVDGHI---- 219
           GPG+            +R   R+  YI  G  RF          F HVD++V  H+    
Sbjct: 187 GPGE------------QRHLPRIVSYIENGIFRFVYGDPDSLVEFVHVDNLVSAHLLAAD 234

Query: 220 AAMEKGR---SGERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFF 275
           A  EK +   +G+ Y ++ G   +  + F       G S P   +P+ +I  + ++    
Sbjct: 235 ALTEKQQCRAAGQAYFISDGRPVNNFEFFRPLVEGLGYSFPTLRLPISMIYFFAFLTEMV 294

Query: 276 SRITGKL----PLISYPTVHVLAHQWAYSCVKAKTELGYNPRSLKEGLQEVLPWLRSSG 330
             + G++    PL++   V+       +S  KA+ ELGY P+     L++V+ W ++ G
Sbjct: 295 HFVVGRIYNFQPLLTRTEVYKTGVTHYFSMRKAREELGYEPKLYD--LEDVVQWFQARG 351

Danio rerio (taxid: 7955)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|P51105|DFRA_GERHY Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=DFR PE=2 SV=1

 Score = 90.1 bits (222), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 146/309 (47%), Gaps = 44/309 (14%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG------LP-SEGALELVYGDVTD 55
           + V+GA+G++G  L   LL++G+ V A VR   D+        LP ++  L+L   D+T 
Sbjct: 9   VCVTGAAGFIGSWLVMRLLERGYVVHATVRDPGDLKKVKHLLELPKAQTNLKLWKADLTQ 68

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
             S  +A  GCH +FH A  ++    DP +      +EG+ +++++  + KTV+K+++TS
Sbjct: 69  EGSFDEAIQGCHGVFHLATPMDFESKDPENEIIKPTIEGVLSIIRSCVKAKTVKKLVFTS 128

Query: 115 SFFALGSTDG-----YIADENQ------VHEEKYFCTQYERSKAVADKIALQAAS-EGLP 162
           S    G+ +G     ++ DE+       ++ +K     Y  SK +A+K A  A     + 
Sbjct: 129 S---AGTVNGQEKQLHVYDESHWSDLDFIYSKKMTAWMYFVSKTLAEKAAWDATKGNNIS 185

Query: 163 IVPVYPGVIYGPGKLTT--GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIA 220
            + + P ++ GP   +T   +LV  L +   N      I  G     + H+DD+ + HI 
Sbjct: 186 FISIIPTLVVGPFITSTFPPSLVTALSLITGNEAHYSIIKQGQ----YVHLDDLCECHIY 241

Query: 221 AMEKGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITG 280
             E  ++  RY+ +  +A+  Q+    A I     P + IP             F  I  
Sbjct: 242 LYENPKAKGRYICSSHDATIHQL----AKIIKDKWPEYYIP-----------TKFPGIDE 286

Query: 281 KLPLISYPT 289
           +LP++S+ +
Sbjct: 287 ELPIVSFSS 295

Gerbera hybrida (taxid: 18101)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|Q0IH73|D42E1_XENLA Short-chain dehydrogenase/reductase family 42E member 1 OS=Xenopus laevis GN=sdr42e1 PE=2 SV=1

 Score = 88.6 bits (218), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 88/351 (25%), Positives = 144/351 (41%), Gaps = 33/351 (9%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           ++++G  GY G RL   L ++G  V     R  D   LP    +  V GDV     L D 
Sbjct: 11  VVITGGGGYFGHRLGCTLHEKGVHVILFDIRKPD-QELPE--GIHFVQGDVRSLSQLEDV 67

Query: 63  CFGCHVIFHTAA--LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL- 119
             G   +FHTA+  +         +  A+NV G +N++QA   T  V +++YTS+F  + 
Sbjct: 68  VAGASCVFHTASYGMSGKEQLHRQKIEAINVRGTENIIQACINT-NVPRLVYTSTFNVIF 126

Query: 120 GSTDGYIADENQVH-EEKYFCTQYERSKAVADKIALQAASEGLP-------IVPVYPGVI 171
           G       DE+  +  +  F   Y R+K VA+   L+  ++ L           +    I
Sbjct: 127 GGQTIRDGDESLPYLPQDAFVDNYSRTKTVAEMFVLKMNNQELKNNSGFLRTCSLRAAGI 186

Query: 172 YGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERY 231
           YGPG+          +I      +  ++   N    F HVD+++  HI A E   S ++Y
Sbjct: 187 YGPGEQRH----LPRIISALEKGMFLFVYGDNPLVQFVHVDNLISAHILAAEALTSEKKY 242

Query: 232 LLTGE--------NASFMQIFDMAAVITGTSRPRFCIPLWLIEAYG----WILVFFSRIT 279
           +  G+          +  + F       G   P    PL L+  +     WI  F S + 
Sbjct: 243 IAAGQPYFISDGPPVNNFEFFRPLVEGLGYKFPSLRFPLSLVYFFAFLTEWIHFFISPVC 302

Query: 280 GKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPRSLKEGLQEVLPWLRSSG 330
              P+++   V        +   KA  ELG+ P+     +Q+V  W ++ G
Sbjct: 303 DFQPILTRAEVFKTGVTHYFKIEKATRELGFEPQPFT--MQDVAEWFKNHG 351

Xenopus laevis (taxid: 8355)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|P55584|Y4NL_RHISN Uncharacterized protein y4nL OS=Rhizobium sp. (strain NGR234) GN=NGR_a02300 PE=4 SV=1

 Score = 87.8 bits (216), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 100/356 (28%), Positives = 168/356 (47%), Gaps = 44/356 (12%)

Query: 3   ILVSGASGYLGGRLCHA---------LLKQGH-SVRALVRRTSDISGLPSEGALELVYGD 52
           +L++GA+G+LGGR+  A         LL  G   VRALV +  DIS L  +G +E+  GD
Sbjct: 14  VLLTGAAGWLGGRVAAALTTGLPDAGLLANGSFRVRALVPKGEDISELRKQG-MEIATGD 72

Query: 53  VTDYRSLVDACFGCH--VIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKI 110
           + + +S+     G    V+ H A ++ P   + ++F A+N +G  N+V AA++      +
Sbjct: 73  LREMQSVRAFVAGAEGAVLIHMAGIIHP--KNVAQFEAINTQGTINLVTAAQKAGVRRAV 130

Query: 111 IYTSSFFALGSTDGYI--ADENQVHEEKYFC-TQYERSKAVADKI--ALQAASEGLPIVP 165
           + +S+     S  G+   +D     E  Y     Y RSK + ++   A  AA   + IV 
Sbjct: 131 VMSSN-----SPVGFNPHSDHRFTEESPYDPHAGYGRSKMLMERALRAEVAAGSTMEIVI 185

Query: 166 VYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDG-HIAAMEK 224
           V     YGP + +   L  K++ E   G+ P  IG G +R S  + D++  G  +AA+ +
Sbjct: 186 VRAPWFYGPNQPSRQTLFFKMVKE---GKFP-IIGSGRNRRSMGYTDNLAQGILLAAVHE 241

Query: 225 GRSGERYLLTGENASFM-QIFDMAAVITG-----TSRPRFCIPLWLIEAYGWILVFFSRI 278
             +G+ + L  E    M +I ++  ++       T +P    P  L +  G         
Sbjct: 242 RAAGDIFWLADETPYTMNEIIEVVGMVLHEDFGMTVKPN---PFRLPDIVGGAATILD-A 297

Query: 279 TGKLPLISYPTVHVLAHQ---WAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSSG 330
           T +   I +  +HVL+      A    KA+  LGY P+ +L+EG+Q  + W   +G
Sbjct: 298 TLQYAGIYHQKIHVLSEMNKTIACDITKARKVLGYAPKIALREGMQRSVDWCVKNG 353

Putative nucleotide sugar epimerase/dehydrogenase.

Rhizobium sp. (strain NGR234) (taxid: 394)

>sp|Q9SEV0|BAN_ARATH Anthocyanidin reductase OS=Arabidopsis thaliana GN=BAN PE=1 SV=2

 Score = 86.3 bits (212), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 120/267 (44%), Gaps = 23/267 (8%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVR------RTSDISGLPSEGALELVYGDVTD 55
           K  V G +G L   L   LL+ G+ V   VR      + + +  L   G L++   D+TD
Sbjct: 12  KACVIGGTGNLASILIKHLLQSGYKVNTTVRDPENEKKIAHLRKLQELGDLKIFKADLTD 71

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDPSR-FFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
             S   +  GC  IFH A  +     DP +      ++G+ NV+++  ++K+V+++IYTS
Sbjct: 72  EDSFESSFSGCEYIFHVATPINFKSEDPEKDMIKPAIQGVINVLKSCLKSKSVKRVIYTS 131

Query: 115 SFFALG----STDGYIADENQ------VHEEKYFCTQYERSKAVADKIALQAASEG-LPI 163
           S  A+     S  G + +E        + EEK F   Y  SK +A+K A + A E  + +
Sbjct: 132 SAAAVSINNLSGTGIVMNEENWTDVEFLTEEKPFNWGYPISKVLAEKTAWEFAKENKINL 191

Query: 164 VPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDR-----FSFCHVDDVVDGH 218
           V V P +I G   L+       L +    G+     G    +      SF HVDD+   H
Sbjct: 192 VTVIPALIAGNSLLSDPPSSLSLSMSFITGKEMHVTGLKEMQKLSGSISFVHVDDLARAH 251

Query: 219 IAAMEKGRSGERYLLTGENASFMQIFD 245
           +   EK  +  RY+    N S  +I D
Sbjct: 252 LFLAEKETASGRYICCAYNTSVPEIAD 278

Involved in the biosynthesis of condensed tannins. Converts cyanidin into (-)-epicatechin as the major product.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 7

EC: 7

>sp|P14721|DFRA_ANTMA Dihydroflavonol-4-reductase OS=Antirrhinum majus GN=DFRA PE=2 SV=1

 Score = 86.3 bits (212), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 137/278 (49%), Gaps = 27/278 (9%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG------LP-SEGALELVYGDVTD 55
           + V+GA+G++G  L   LL++G++VRA VR   ++        LP ++  L L   D+T 
Sbjct: 20  VCVTGAAGFIGSWLVMRLLERGYTVRATVRDPGNMKKVKHLIELPKADTNLTLWKADMTV 79

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
             S  +A  GC  +FH A  +E    DP +      ++G+ N++++  + KTV+K I+T+
Sbjct: 80  EGSFDEAIQGCEGVFHLATSMEFDSVDPENEVIKPTIDGMLNIIKSCVQAKTVKKFIFTT 139

Query: 115 SFFALG----------STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPI 163
           S   +            TD   +D + ++ +K     Y  SK +A+K  ++AA E  +  
Sbjct: 140 SGGTVNVEEHQKPVYDETDS--SDMDFINSKKMTGWMYFVSKILAEKAGMEAAKENNIDF 197

Query: 164 VPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAME 223
           + + P ++ GP  + T        +    G    Y      +  + H+DD+ +GHI   E
Sbjct: 198 ISIIPPLVVGPFIMPTFPPSLITALSPITGNEAHYSIIK--QCQYVHLDDLCEGHIFLFE 255

Query: 224 KGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIP 261
             ++  RY+ +  +A+   I+D+A +IT  + P + IP
Sbjct: 256 YPKAEGRYICSSHDAT---IYDIAKLIT-ENWPEYHIP 289

Antirrhinum majus (taxid: 4151)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|Q9FX01|HSDD1_ARATH 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 OS=Arabidopsis thaliana GN=3BETAHSD/D1 PE=2 SV=1

 Score = 85.9 bits (211), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 160/355 (45%), Gaps = 47/355 (13%)

Query: 4   LVSGASGYLGGRLCHALLK-QGHSVR------ALVRRTSDISGLPSE----GALELVYGD 52
           +V+G  G+    L   L++ Q   VR      A+V    + +G+  E    G ++ V  D
Sbjct: 13  VVTGGRGFAARHLVEMLVRYQMFHVRIADLAPAIVLNPHEETGILGEAIRSGRVQYVSAD 72

Query: 53  VTDYRSLVDACFGCHVIFHTAALVEPWLPDPS-----RFFAVNVEGLKNVVQAAKETKTV 107
           + +   +V    G  V+FH AA      PD S       ++VNV+G  NV+ A  E   V
Sbjct: 73  LRNKTQVVKGFQGAEVVFHMAA------PDSSINNHQLQYSVNVQGTTNVIDACIEVG-V 125

Query: 108 EKIIYTSSFFAL--GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA-ASEGLPIV 164
           +++IYTSS   +  G      ADE+  +  K+    Y  +KA  + + L+A    GL   
Sbjct: 126 KRLIYTSSPSVVFDGVHGTLNADESLPYPPKH-NDSYSATKAEGEALILKANGRSGLLTC 184

Query: 165 PVYPGVIYGPG-KLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAME 223
            + P  I+GPG KL    +V  L+     G+    IG G++ + F +V++VV  H+ A  
Sbjct: 185 CIRPSSIFGPGDKL----MVPSLVTAARAGKSKFIIGDGSNFYDFTYVENVVHAHVCAER 240

Query: 224 KGRS---------GERYLLTG-ENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILV 273
              S         G+ Y +T  E   F +         G  RP   IP  L+    +++ 
Sbjct: 241 ALASGGEVCAKAAGQAYFITNMEPIKFWEFMSQLLEGLGYERPSIKIPASLMMPIAYLVE 300

Query: 274 FFSRITG----KLPLISYPTVHVLAHQWAYSCVKAKTELGYNP-RSLKEGLQEVL 323
              ++ G    K+P+++   V +L+    +   KAK  LGY+P   L+EG++  +
Sbjct: 301 LAYKLLGPYGMKVPVLTPSRVRLLSCNRTFDSSKAKDRLGYSPVVPLQEGIKRTI 355

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 0

>sp|Q4R7R1|D42E1_MACFA Short-chain dehydrogenase/reductase family 42E member 1 OS=Macaca fascicularis GN=SDR42E1 PE=2 SV=1

 Score = 83.6 bits (205), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 159/366 (43%), Gaps = 60/366 (16%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY----RS 58
           +L++G  GY G RL  AL ++G  V  L   +S    +P    ++ + GD+       ++
Sbjct: 11  VLITGGGGYFGFRLGCALNQKGVHV-ILFDISSPAETIPE--GIKFIQGDICHLSDIEKA 67

Query: 59  LVDACFGCHVIFHTAALVEPWLPDPSRFF--AVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
             DA   C  +FH A+         +R     VN+ G  N++QA +  + V +++YTS+F
Sbjct: 68  FQDADITC--VFHIASYGMSGREQLNRNLIEEVNIGGTDNILQACQRRR-VPRLVYTSTF 124

Query: 117 FAL-GSTDGYIADENQVHEEKYF-CTQYERSKAVADKIALQAASEGLPI---------VP 165
             + G       DE+  +   +     Y R+K++A+K  L+A   G P+           
Sbjct: 125 NVIFGGQVIRNGDESLPYLPLHLHPDHYSRTKSIAEKKVLEA--NGTPLDRGDGVLRTCA 182

Query: 166 VYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIG-------YGNDR--FSFCHVDDVVD 216
           + P  IYGPG+            +R   R+  YI        YG+ R    F HVD++V 
Sbjct: 183 LRPAGIYGPGE------------QRHLPRIVSYIEKGLFKFVYGDPRSLVEFVHVDNLVQ 230

Query: 217 GHIAAMEKGR-------SGERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAY 268
            HI A E  R       SG+ Y ++ G   +  + F       G + P   +PL L+  +
Sbjct: 231 AHILASEALRADKGHIASGQPYFISDGRPVNNFEFFRPLVEGLGYTFPSTRLPLTLVYCF 290

Query: 269 GWILVFFSRITGKL----PLISYPTVHVLAHQWAYSCVKAKTELGYNPRSLKEGLQEVLP 324
            ++      I G+L    P ++   V+       +S  KAK ELGY  +     LQE + 
Sbjct: 291 AFLTEMVHFILGRLYNFQPFLTRTEVYKTGVTHYFSLEKAKKELGYKAQPFD--LQEAVE 348

Query: 325 WLRSSG 330
           W ++ G
Sbjct: 349 WFKAHG 354

Macaca fascicularis (taxid: 9541)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	334
224067274	337	predicted protein [Populus trichocarpa]	1.0	0.991	0.783	1e-156
297798600	343	predicted protein [Arabidopsis lyrata su	0.994	0.967	0.781	1e-156
21450875	338	unknown protein [Arabidopsis thaliana]	0.994	0.982	0.757	1e-153
15234163	344	Rossmann-fold NAD(P)-binding domain-cont	0.994	0.965	0.757	1e-152
255538356	334	dihydroflavonal-4-reductase, putative [R	1.0	1.0	0.754	1e-152
449498709	335	PREDICTED: LOW QUALITY PROTEIN: putative	1.0	0.997	0.758	1e-151
225458585	339	PREDICTED: putative dihydroflavonol-4-re	1.0	0.985	0.752	1e-150
334187127	327	Rossmann-fold NAD(P)-binding domain-cont	0.964	0.984	0.762	1e-148
147866715	339	hypothetical protein VITISV_023179 [Viti	1.0	0.985	0.743	1e-148
224067272	338	predicted protein [Populus trichocarpa]	0.997	0.985	0.744	1e-147

>gi|224067274|ref|XP_002302442.1| predicted protein [Populus trichocarpa] gi|222844168|gb|EEE81715.1| predicted protein [Populus trichocarpa]

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 264/337 (78%), Positives = 300/337 (89%), Gaps = 3/337 (0%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP---SEGALELVYGDVTDYR 57
           MK LV+GASGYLGGRLCH LLKQGHSVRALVRRTSDIS LP   S G  EL YGD+TDY+
Sbjct: 1   MKALVTGASGYLGGRLCHGLLKQGHSVRALVRRTSDISELPPPSSGGVFELAYGDITDYQ 60

Query: 58  SLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
           SL+DA  GC VIFH AA+VEPWLPDPS+FF+VNVEGL NV+QAAKET+T+EKIIYTSSFF
Sbjct: 61  SLLDAFSGCQVIFHAAAIVEPWLPDPSKFFSVNVEGLNNVLQAAKETETIEKIIYTSSFF 120

Query: 118 ALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKL 177
           ALGSTDGY+ADE+QVH EK FCT+YERSK +ADKIA QAA+EG+PIV +YPGVIYGPGKL
Sbjct: 121 ALGSTDGYVADESQVHCEKRFCTEYERSKMIADKIASQAAAEGVPIVMLYPGVIYGPGKL 180

Query: 178 TTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTGEN 237
           TTGN+VA+L+IERF GRLPGYIGYGND+FSFCHVDD+VDGHIAAM+KGR GERYLLTGEN
Sbjct: 181 TTGNIVAQLLIERFAGRLPGYIGYGNDKFSFCHVDDLVDGHIAAMDKGRQGERYLLTGEN 240

Query: 238 ASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQW 297
           ASF  +FDMAA+I+ T +PRF IPL +IE+YGW+LV  SR+TG LPLIS PTVHVL HQW
Sbjct: 241 ASFKLVFDMAAIISETKKPRFSIPLCIIESYGWLLVLVSRLTGNLPLISPPTVHVLRHQW 300

Query: 298 AYSCVKAKTELGYNPRSLKEGLQEVLPWLRSSGMIKY 334
            YSC KAKTELGYNPR L++GL+EVLPWL+S G+IKY
Sbjct: 301 EYSCEKAKTELGYNPRGLEDGLKEVLPWLKSMGVIKY 337

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297798600|ref|XP_002867184.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297313020|gb|EFH43443.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  555 bits (1431), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 261/334 (78%), Positives = 296/334 (88%), Gaps = 2/334 (0%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKILV+G++GYLG RLCHALL++GHSVRALVRRTSDIS LP E  +EL YGDVTDYRSL 
Sbjct: 12  MKILVTGSTGYLGARLCHALLRRGHSVRALVRRTSDISDLPPE--VELAYGDVTDYRSLT 69

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
           DAC GC ++FH AALVEPWLPDPSRF +VNV GLKNV++A KETKTV+KIIYTSSFFALG
Sbjct: 70  DACSGCDIVFHAAALVEPWLPDPSRFVSVNVGGLKNVLEAVKETKTVQKIIYTSSFFALG 129

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTG 180
           STDG +A+E+QVH E++FCT+YERSKA ADKIAL AASEG+PI+ +YPGVIYGPGKLTTG
Sbjct: 130 STDGSVANEDQVHSERFFCTEYERSKATADKIALNAASEGVPIILLYPGVIYGPGKLTTG 189

Query: 181 NLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTGENASF 240
           N+VAKL+IERFNGRLPGYIG GNDR+SF HVDDVV+GH AAMEKGR GERYLLTGENASF
Sbjct: 190 NMVAKLLIERFNGRLPGYIGSGNDRYSFSHVDDVVEGHFAAMEKGRLGERYLLTGENASF 249

Query: 241 MQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYS 300
             +FDMAA+ITGT +P F IPLW I AYGW+ V  SR+TGKLPLIS PTV VL HQWAYS
Sbjct: 250 KLVFDMAALITGTKKPNFSIPLWAINAYGWLSVLISRVTGKLPLISPPTVKVLRHQWAYS 309

Query: 301 CVKAKTELGYNPRSLKEGLQEVLPWLRSSGMIKY 334
           C KAK ELGYNPRSLKEGL+E+LPWL+S G+I+Y
Sbjct: 310 CDKAKLELGYNPRSLKEGLEEMLPWLKSLGVIQY 343

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21450875|gb|AAK59445.2| unknown protein [Arabidopsis thaliana]

 Score =  545 bits (1405), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 253/334 (75%), Positives = 294/334 (88%), Gaps = 2/334 (0%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKILV+G++GYLG RLCH LL++GHSVRALVRRTSD+S LP E  +EL YGDVTDYRSL 
Sbjct: 7   MKILVTGSTGYLGARLCHVLLRRGHSVRALVRRTSDLSDLPPE--VELAYGDVTDYRSLT 64

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
           DAC GC ++FH AALVEPWLPDPSRF +VNV GLKNV++A KETKTV+KIIYTSSFFALG
Sbjct: 65  DACSGCDIVFHAAALVEPWLPDPSRFISVNVGGLKNVLEAVKETKTVQKIIYTSSFFALG 124

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTG 180
           STDG +A+ENQVH E++FCT+YERSKAVADK+AL AASEG+PI+ +YPGVI+GPGKLT+ 
Sbjct: 125 STDGSVANENQVHNERFFCTEYERSKAVADKMALNAASEGVPIILLYPGVIFGPGKLTSA 184

Query: 181 NLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTGENASF 240
           N+VA+++IERFNGRLPGYIG G DR+SF HVDDVV+GH+AAMEKGR GERYLLTGENASF
Sbjct: 185 NMVARMLIERFNGRLPGYIGSGTDRYSFSHVDDVVEGHVAAMEKGRLGERYLLTGENASF 244

Query: 241 MQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYS 300
             +FDMAA+ITGT +P F IPLW I AYGW+ V  SR+TGKLPLIS PTV VL HQW+YS
Sbjct: 245 KLVFDMAALITGTKKPNFSIPLWAINAYGWLSVLISRVTGKLPLISPPTVTVLRHQWSYS 304

Query: 301 CVKAKTELGYNPRSLKEGLQEVLPWLRSSGMIKY 334
           C KAK ELGYNPRSLKEGL+E+LPWL+S G+I Y
Sbjct: 305 CDKAKLELGYNPRSLKEGLEEMLPWLKSLGVIHY 338

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15234163|ref|NP_195062.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|13926213|gb|AAK49584.1|AF370578_1 putative protein [Arabidopsis thaliana] gi|4490303|emb|CAB38794.1| putative protein [Arabidopsis thaliana] gi|7270284|emb|CAB80053.1| putative protein [Arabidopsis thaliana] gi|26983846|gb|AAN86175.1| unknown protein [Arabidopsis thaliana] gi|332660813|gb|AEE86213.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  545 bits (1404), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 253/334 (75%), Positives = 294/334 (88%), Gaps = 2/334 (0%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKILV+G++GYLG RLCH LL++GHSVRALVRRTSD+S LP E  +EL YGDVTDYRSL 
Sbjct: 13  MKILVTGSTGYLGARLCHVLLRRGHSVRALVRRTSDLSDLPPE--VELAYGDVTDYRSLT 70

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
           DAC GC ++FH AALVEPWLPDPSRF +VNV GLKNV++A KETKTV+KIIYTSSFFALG
Sbjct: 71  DACSGCDIVFHAAALVEPWLPDPSRFISVNVGGLKNVLEAVKETKTVQKIIYTSSFFALG 130

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTG 180
           STDG +A+ENQVH E++FCT+YERSKAVADK+AL AASEG+PI+ +YPGVI+GPGKLT+ 
Sbjct: 131 STDGSVANENQVHNERFFCTEYERSKAVADKMALNAASEGVPIILLYPGVIFGPGKLTSA 190

Query: 181 NLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTGENASF 240
           N+VA+++IERFNGRLPGYIG G DR+SF HVDDVV+GH+AAMEKGR GERYLLTGENASF
Sbjct: 191 NMVARMLIERFNGRLPGYIGSGTDRYSFSHVDDVVEGHVAAMEKGRLGERYLLTGENASF 250

Query: 241 MQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYS 300
             +FDMAA+ITGT +P F IPLW I AYGW+ V  SR+TGKLPLIS PTV VL HQW+YS
Sbjct: 251 KLVFDMAALITGTKKPNFSIPLWAINAYGWLSVLISRVTGKLPLISPPTVTVLRHQWSYS 310

Query: 301 CVKAKTELGYNPRSLKEGLQEVLPWLRSSGMIKY 334
           C KAK ELGYNPRSLKEGL+E+LPWL+S G+I Y
Sbjct: 311 CDKAKLELGYNPRSLKEGLEEMLPWLKSLGVIHY 344

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255538356|ref|XP_002510243.1| dihydroflavonal-4-reductase, putative [Ricinus communis] gi|223550944|gb|EEF52430.1| dihydroflavonal-4-reductase, putative [Ricinus communis]

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 252/334 (75%), Positives = 296/334 (88%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MK++V+GASGYLGGRLCHAL+++GHS+RALVRRTSD+S LP+  +LEL YGD+TDYRSL+
Sbjct: 1   MKVVVTGASGYLGGRLCHALIEEGHSIRALVRRTSDLSALPTADSLELAYGDITDYRSLL 60

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
            A  GCHVIFHTAALVEPWLPDPS+FF+VNV GLKNV++AA+ETKT+EKIIYTSSFFALG
Sbjct: 61  AAFSGCHVIFHTAALVEPWLPDPSKFFSVNVGGLKNVLEAARETKTIEKIIYTSSFFALG 120

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTG 180
            TDG++ADE+QVH EK FCT+YERSKA ADKIALQAA++G+PIV VYPGVIYGPGKLTTG
Sbjct: 121 PTDGFVADESQVHPEKVFCTEYERSKATADKIALQAAADGVPIVMVYPGVIYGPGKLTTG 180

Query: 181 NLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTGENASF 240
           N+VA+L+IERF GRLPGY+GYGND+FSF HVDDVV GHIAAM K R GERYLLTGENASF
Sbjct: 181 NVVAQLLIERFQGRLPGYMGYGNDKFSFSHVDDVVQGHIAAMAKSRLGERYLLTGENASF 240

Query: 241 MQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYS 300
           M +FD+AA+IT T +P F IPLW+ EAYGW+LV    +TGKLPL+S PTV+VL  QWAYS
Sbjct: 241 MYVFDVAAIITSTKKPSFSIPLWVTEAYGWVLVLLFYLTGKLPLVSPPTVNVLRRQWAYS 300

Query: 301 CVKAKTELGYNPRSLKEGLQEVLPWLRSSGMIKY 334
           C KAK  L Y+PRSL++GL+EVLPWL+S G IKY
Sbjct: 301 CEKAKANLDYHPRSLQDGLKEVLPWLKSLGEIKY 334

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449498709|ref|XP_004160612.1| PREDICTED: LOW QUALITY PROTEIN: putative dihydroflavonol-4-reductase-like [Cucumis sativus]

 Score =  541 bits (1395), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 254/335 (75%), Positives = 295/335 (88%), Gaps = 1/335 (0%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-GALELVYGDVTDYRSL 59
           MKILV+GASGYLGGRLC ALL +G SVRALVR TSD+S LP +  ALELV+GD+TDY+SL
Sbjct: 1   MKILVTGASGYLGGRLCRALLNRGFSVRALVRPTSDLSSLPHDPSALELVHGDITDYQSL 60

Query: 60  VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
           ++AC GCHV+FH AA+VEPWLPDPS+F +VNV GL+NV+QA +ETKT+EKIIYTSSFFAL
Sbjct: 61  LEACSGCHVVFHAAAMVEPWLPDPSKFISVNVRGLQNVLQAVRETKTIEKIIYTSSFFAL 120

Query: 120 GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTT 179
           GSTDGY+A E+QVH EK+FCT+YE+SKA ADKIALQAASEG+PIVPVYPGVIYG GK+T 
Sbjct: 121 GSTDGYVAVESQVHHEKFFCTEYEKSKATADKIALQAASEGIPIVPVYPGVIYGVGKVTA 180

Query: 180 GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTGENAS 239
           GN+VA+++IERFNGRLPGY+G G D+FSF HVDDVV+GHI AM+KGR GERYLLTGENAS
Sbjct: 181 GNVVARMLIERFNGRLPGYLGQGKDKFSFSHVDDVVEGHIVAMQKGRVGERYLLTGENAS 240

Query: 240 FMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAY 299
           F+++FD AA ITGT +P F IPLWLIE YGW+ VF SRITGKLPLIS PTV VL HQWAY
Sbjct: 241 FVEVFDAAAAITGTKKPIFNIPLWLIETYGWVSVFISRITGKLPLISPPTVKVLRHQWAY 300

Query: 300 SCVKAKTELGYNPRSLKEGLQEVLPWLRSSGMIKY 334
           SC KAK EL YNPRSLK GL+E+L WL+S G+IKY
Sbjct: 301 SCEKAKQELDYNPRSLKXGLEEMLAWLKSLGLIKY 335

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225458585|ref|XP_002284636.1| PREDICTED: putative dihydroflavonol-4-reductase [Vitis vinifera] gi|302142332|emb|CBI19535.3| unnamed protein product [Vitis vinifera]

 Score =  536 bits (1382), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 255/339 (75%), Positives = 291/339 (85%), Gaps = 5/339 (1%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTD 55
           MK+LV+GASGYLGGRLCHALL+ GH VRA VRR+SD+S LP      +GALEL YGDVT+
Sbjct: 1   MKVLVTGASGYLGGRLCHALLRHGHVVRAFVRRSSDLSCLPPVGGGDDGALELAYGDVTE 60

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
           YR+++ AC GC V+FH AALVEPWLPDPSRF +VNV GLKNV+QA KETKTVEK+IYTSS
Sbjct: 61  YRAVLAACDGCQVVFHVAALVEPWLPDPSRFLSVNVGGLKNVLQAVKETKTVEKLIYTSS 120

Query: 116 FFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPG 175
           FFALGSTDGY+ADE+Q+H EK+FCT+YERSK VADKIALQAA EG PIV VYPGVIYGPG
Sbjct: 121 FFALGSTDGYVADESQIHPEKFFCTEYERSKVVADKIALQAAVEGSPIVVVYPGVIYGPG 180

Query: 176 KLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTG 235
           K+T GN+VA+++IERFNGRLPGY+GYGND+ SF HVDDVV+G IAAM KGR GERYLLTG
Sbjct: 181 KVTAGNIVARMLIERFNGRLPGYVGYGNDKCSFSHVDDVVEGQIAAMNKGRLGERYLLTG 240

Query: 236 ENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAH 295
           ENASF  +FD+AAVITGT +P F IP+W+I+ YGW  V F+RITGKLPLIS PTV VL H
Sbjct: 241 ENASFKLVFDLAAVITGTKKPWFNIPIWVIDVYGWASVLFARITGKLPLISPPTVQVLRH 300

Query: 296 QWAYSCVKAKTELGYNPRSLKEGLQEVLPWLRSSGMIKY 334
           QWAYSC KAK ELGYNPRSLKEGL EVL WL++ G I Y
Sbjct: 301 QWAYSCEKAKVELGYNPRSLKEGLAEVLAWLKTLGSIDY 339

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334187127|ref|NP_001190902.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|332660815|gb|AEE86215.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 247/324 (76%), Positives = 286/324 (88%), Gaps = 2/324 (0%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKILV+G++GYLG RLCH LL++GHSVRALVRRTSD+S LP E  +EL YGDVTDYRSL 
Sbjct: 1   MKILVTGSTGYLGARLCHVLLRRGHSVRALVRRTSDLSDLPPE--VELAYGDVTDYRSLT 58

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
           DAC GC ++FH AALVEPWLPDPSRF +VNV GLKNV++A KETKTV+KIIYTSSFFALG
Sbjct: 59  DACSGCDIVFHAAALVEPWLPDPSRFISVNVGGLKNVLEAVKETKTVQKIIYTSSFFALG 118

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTG 180
           STDG +A+ENQVH E++FCT+YERSKAVADK+AL AASEG+PI+ +YPGVI+GPGKLT+ 
Sbjct: 119 STDGSVANENQVHNERFFCTEYERSKAVADKMALNAASEGVPIILLYPGVIFGPGKLTSA 178

Query: 181 NLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTGENASF 240
           N+VA+++IERFNGRLPGYIG G DR+SF HVDDVV+GH+AAMEKGR GERYLLTGENASF
Sbjct: 179 NMVARMLIERFNGRLPGYIGSGTDRYSFSHVDDVVEGHVAAMEKGRLGERYLLTGENASF 238

Query: 241 MQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYS 300
             +FDMAA+ITGT +P F IPLW I AYGW+ V  SR+TGKLPLIS PTV VL HQW+YS
Sbjct: 239 KLVFDMAALITGTKKPNFSIPLWAINAYGWLSVLISRVTGKLPLISPPTVTVLRHQWSYS 298

Query: 301 CVKAKTELGYNPRSLKEGLQEVLP 324
           C KAK ELGYNPRSLKEGL+E+LP
Sbjct: 299 CDKAKLELGYNPRSLKEGLEEMLP 322

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147866715|emb|CAN78410.1| hypothetical protein VITISV_023179 [Vitis vinifera]

 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 252/339 (74%), Positives = 288/339 (84%), Gaps = 5/339 (1%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTD 55
           MK+LV+GASGYLGGRLCHALL+ GH VRA VRR+SD+S LP      +GALEL YGDVT+
Sbjct: 1   MKVLVTGASGYLGGRLCHALLRHGHVVRAFVRRSSDLSCLPPVGGGDDGALELAYGDVTE 60

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
           YR+++ AC GC V+FH AALVEPWLPDPSRF +VNV GLKNV+QA KETKTVEK+IYTSS
Sbjct: 61  YRAVLAACDGCQVVFHVAALVEPWLPDPSRFLSVNVGGLKNVLQAVKETKTVEKLIYTSS 120

Query: 116 FFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPG 175
           FFALGSTDGY+ADE+Q+H EK+FCT+YERSK VADKIALQAA EG PIV VYPGVIYGPG
Sbjct: 121 FFALGSTDGYVADESQIHPEKFFCTEYERSKVVADKIALQAAVEGSPIVVVYPGVIYGPG 180

Query: 176 KLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTG 235
           K+T GN+VA+++IERFNGRLPGY+GYGND+ SF HVDDVV+G  AAM KG  GERYLLTG
Sbjct: 181 KVTAGNIVARMLIERFNGRLPGYVGYGNDKCSFSHVDDVVEGQXAAMNKGXLGERYLLTG 240

Query: 236 ENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAH 295
           ENASF  +FD+AA ITGT +P F IP+W+I+ YGW  V F+RITGKLPLIS PTV VL H
Sbjct: 241 ENASFKLVFDLAAAITGTKKPWFNIPIWVIDVYGWASVLFARITGKLPLISPPTVQVLRH 300

Query: 296 QWAYSCVKAKTELGYNPRSLKEGLQEVLPWLRSSGMIKY 334
           QWAYSC KAK ELGYNPRSLKEGL EVL WL++ G I Y
Sbjct: 301 QWAYSCEKAKVELGYNPRSLKEGLAEVLAWLKTLGSIDY 339

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224067272|ref|XP_002302441.1| predicted protein [Populus trichocarpa] gi|222844167|gb|EEE81714.1| predicted protein [Populus trichocarpa]

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 250/336 (74%), Positives = 284/336 (84%), Gaps = 3/336 (0%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGA---LELVYGDVTDYRS 58
           KI+V+GASG++GG LCH LLKQGHSVRALVRRTSD+SGLPS       EL YGDVTDYRS
Sbjct: 3   KIVVTGASGFVGGVLCHTLLKQGHSVRALVRRTSDLSGLPSPSTGENFELAYGDVTDYRS 62

Query: 59  LVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA 118
           L+DA FGC VIFH AA VEPWLPDPS+FF+VNV GLKNVVQAAKETK +EKIIYTSS  A
Sbjct: 63  LLDAIFGCDVIFHAAAAVEPWLPDPSKFFSVNVGGLKNVVQAAKETKMIEKIIYTSSMVA 122

Query: 119 LGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLT 178
           LGSTDGY+ADE+QVH EKYF T+YERSK  ADK+A QAA+EGLPIV +YPGV+YGPGKLT
Sbjct: 123 LGSTDGYVADESQVHHEKYFSTEYERSKVAADKVASQAAAEGLPIVTLYPGVVYGPGKLT 182

Query: 179 TGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTGENA 238
           TGN +AK++I+RF GRLPGYIG GNDR SFCHVDDVV GHIAAM+KGR GERYLLTGENA
Sbjct: 183 TGNALAKMLIDRFAGRLPGYIGRGNDRLSFCHVDDVVGGHIAAMDKGRLGERYLLTGENA 242

Query: 239 SFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWA 298
           SF ++ D+AA+IT T +PRF IPLW+IEAYGW+ +     TGKLPL+  P+VHVL HQW 
Sbjct: 243 SFSRVLDIAAIITRTEKPRFSIPLWVIEAYGWLSILIFHFTGKLPLLCPPSVHVLRHQWE 302

Query: 299 YSCVKAKTELGYNPRSLKEGLQEVLPWLRSSGMIKY 334
           YSC KA+ EL YNPRSLKEGL E+LPWL+S G I Y
Sbjct: 303 YSCEKARIELDYNPRSLKEGLDELLPWLKSLGAITY 338

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	334
TAIR|locus:2119161	344	FLDH "farnesol dehydrogenase"	0.994	0.965	0.757	1.1e-140
UNIPROTKB|Q60A54	328	MCA1017 "Nucleoside diphosphat	0.973	0.990	0.340	2.8e-41
UNIPROTKB|Q74FC2	328	hpnA "NAD-dependent nucleoside	0.970	0.987	0.311	1.4e-39
TIGR_CMR|GSU_0687	328	GSU_0687 "dihydroflavonol 4-re	0.970	0.987	0.311	1.4e-39
UNIPROTKB|P96816	340	Rv0139 "Dihydroflavonol-4-redu	0.913	0.897	0.324	2e-33
ZFIN|ZDB-GENE-050417-163	345	nsdhl "NAD(P) dependent steroi	0.925	0.895	0.315	2.2e-25
4-isomerase" [Mycobacterium tuberculosis (taxid:1773)]" target="_blank" href="http://amigo.geneontology.org/cgi-bin/amigo/gp-assoc.cgi?gp=UniProtKB:O53454&session_id=235amigo1369107753">UNIPROTKB|O53454	370	MT1137 "3 beta-hydroxysteroid	0.931	0.840	0.292	8.7e-24
TIGR_CMR|BA_3248	328	BA_3248 "3-beta hydroxysteroid	0.952	0.969	0.261	1.4e-23
UNIPROTKB|E1C279	346	NSDHL "Uncharacterized protein	0.931	0.898	0.305	2.1e-22
WB|WBGene00017429	343	F13D11.4 [Caenorhabditis elega	0.940	0.915	0.291	2.6e-22

TAIR|locus:2119161 FLDH "farnesol dehydrogenase" [Arabidopsis thaliana (taxid:3702)]

 Score = 1376 (489.4 bits), Expect = 1.1e-140, P = 1.1e-140
 Identities = 253/334 (75%), Positives = 294/334 (88%)

Query:     1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
             MKILV+G++GYLG RLCH LL++GHSVRALVRRTSD+S LP E  +EL YGDVTDYRSL 
Sbjct:    13 MKILVTGSTGYLGARLCHVLLRRGHSVRALVRRTSDLSDLPPE--VELAYGDVTDYRSLT 70

Query:    61 DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
             DAC GC ++FH AALVEPWLPDPSRF +VNV GLKNV++A KETKTV+KIIYTSSFFALG
Sbjct:    71 DACSGCDIVFHAAALVEPWLPDPSRFISVNVGGLKNVLEAVKETKTVQKIIYTSSFFALG 130

Query:   121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTG 180
             STDG +A+ENQVH E++FCT+YERSKAVADK+AL AASEG+PI+ +YPGVI+GPGKLT+ 
Sbjct:   131 STDGSVANENQVHNERFFCTEYERSKAVADKMALNAASEGVPIILLYPGVIFGPGKLTSA 190

Query:   181 NLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTGENASF 240
             N+VA+++IERFNGRLPGYIG G DR+SF HVDDVV+GH+AAMEKGR GERYLLTGENASF
Sbjct:   191 NMVARMLIERFNGRLPGYIGSGTDRYSFSHVDDVVEGHVAAMEKGRLGERYLLTGENASF 250

Query:   241 MQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYS 300
               +FDMAA+ITGT +P F IPLW I AYGW+ V  SR+TGKLPLIS PTV VL HQW+YS
Sbjct:   251 KLVFDMAALITGTKKPNFSIPLWAINAYGWLSVLISRVTGKLPLISPPTVTVLRHQWSYS 310

Query:   301 CVKAKTELGYNPRSLKEGLQEVLPWLRSSGMIKY 334
             C KAK ELGYNPRSLKEGL+E+LPWL+S G+I Y
Sbjct:   311 CDKAKLELGYNPRSLKEGLEEMLPWLKSLGVIHY 344

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006721 "terpenoid metabolic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005773 "vacuole" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009788 "negative regulation of abscisic acid mediated signaling pathway" evidence=IMP

GO:0016487 "farnesol metabolic process" evidence=IDA

GO:0047886 "farnesol dehydrogenase activity" evidence=IDA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009749 "response to glucose stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

GO:0009853 "photorespiration" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

UNIPROTKB|Q60A54 MCA1017 "Nucleoside diphosphate sugar epimerase family protein" [Methylococcus capsulatus str. Bath (taxid:243233)]

 Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
 Identities = 114/335 (34%), Positives = 174/335 (51%)

Query:     1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEG-ALELVYGDVTDYRSL 59
             M  LV+GA+G+LG  L  ALL +G  VRA +RR SD++ L  +G A+E  YGD+ D RS+
Sbjct:     1 MTTLVTGATGHLGANLVRALLARGEKVRAFIRRQSDVAAL--DGLAVERAYGDLRDRRSI 58

Query:    60 VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
              DA  G   ++HTAA V     D    F VNV G + ++Q A+    V ++++TSSF A+
Sbjct:    59 RDALEGVERLYHTAAFVSIRDGDRQELFDVNVVGTRMLMQEARRAG-VRRVVHTSSFGAV 117

Query:   120 GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTT 179
             G      ++E+         T YER+KAV++   +  A  GL +  V P  I GP     
Sbjct:   118 GINPQGASNEHWTVSPFEPGTDYERTKAVSEHDVILEAVRGLDVTIVNPAAIVGPWDFRP 177

Query:   180 GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTGENAS 239
              +LV + +++  +GR+  ++      F F  + DVV   + AM+KG  GERYL+TGE+ +
Sbjct:   178 -SLVGRTILDFAHGRMRAFVP---GAFDFVPMRDVVAVELLAMDKGIRGERYLVTGEHCT 233

Query:   240 FMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSR--ITGKLPLISYPTVHVLAHQW 297
               QI      +TG  RPR  IP  L++    +     R     + P  +Y ++ +L    
Sbjct:   234 IGQILQWLEELTGHPRPRLAIPPRLMQGIALLKDPLERRFFPRRTPRFNYHSIRLLNSGK 293

Query:   298 AYSCVKAKTELGYNPRSLKEGLQEVLPWLRSSGMI 332
                  +++ ELG  P S +    + + W R  GMI
Sbjct:   294 RGDSSRSRRELGLVPTSTRAAFADAVAWFRERGMI 328

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q74FC2 hpnA "NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
 Identities = 103/331 (31%), Positives = 167/331 (50%)

Query:     1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
             MK+ V+GA+G++G  +   LLK G  VR L R  SD   L     +E+  GD+ D ++L 
Sbjct:     1 MKVFVTGATGFIGASIVRELLKDGCHVRVLARPGSDRRNLAGLD-VEICEGDLRDRQALE 59

Query:    61 DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
                 GC V++H AA    W   P+  +A NV+G +N+++AA   + + +++YTSS   LG
Sbjct:    60 HGLAGCEVLYHAAADYRLWTRTPAAMYAANVDGTRNILEAALR-RGIARVVYTSSVGTLG 118

Query:   121 ST-DGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTT 179
             +  +G    E            Y++SK +A++ A    + GLP+V V P    GP  +  
Sbjct:   119 NPGNGTPGTETTPVTFADMVGHYKKSKFLAEREAEAFIARGLPLVIVNPSTPVGPHDVKP 178

Query:   180 GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTGENAS 239
                  K++++  N ++P Y+  G    +   V+D   GH+ A   GR GE+Y+L  EN +
Sbjct:   179 -TPTGKIIVDFLNRKMPAYLDTG---LNIIDVEDCARGHLLAARHGRIGEKYILGHENLT 234

Query:   240 FMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAY 299
               +IF + A +TG   PR  +P   I    ++    +++TGK PLI    V +      +
Sbjct:   235 LREIFALLARLTGIPAPRVRLPHTPILMAAYVNEALAKLTGKEPLIPLAGVQMAKKFMFF 294

Query:   300 SCVKAKTELGYNPRSLKEGLQEVLPWLRSSG 330
                KA  ELG   R   + L+  + W R++G
Sbjct:   295 ESSKATGELGLQRRPAVDALRRAVEWFRANG 325

GO:0006694 "steroid biosynthetic process" evidence=ISS

GO:0045552 "dihydrokaempferol 4-reductase activity" evidence=ISS

TIGR_CMR|GSU_0687 GSU_0687 "dihydroflavonol 4-reductase, putative" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
 Identities = 103/331 (31%), Positives = 167/331 (50%)

Query:     1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
             MK+ V+GA+G++G  +   LLK G  VR L R  SD   L     +E+  GD+ D ++L 
Sbjct:     1 MKVFVTGATGFIGASIVRELLKDGCHVRVLARPGSDRRNLAGLD-VEICEGDLRDRQALE 59

Query:    61 DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
                 GC V++H AA    W   P+  +A NV+G +N+++AA   + + +++YTSS   LG
Sbjct:    60 HGLAGCEVLYHAAADYRLWTRTPAAMYAANVDGTRNILEAALR-RGIARVVYTSSVGTLG 118

Query:   121 ST-DGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTT 179
             +  +G    E            Y++SK +A++ A    + GLP+V V P    GP  +  
Sbjct:   119 NPGNGTPGTETTPVTFADMVGHYKKSKFLAEREAEAFIARGLPLVIVNPSTPVGPHDVKP 178

Query:   180 GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTGENAS 239
                  K++++  N ++P Y+  G    +   V+D   GH+ A   GR GE+Y+L  EN +
Sbjct:   179 -TPTGKIIVDFLNRKMPAYLDTG---LNIIDVEDCARGHLLAARHGRIGEKYILGHENLT 234

Query:   240 FMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAY 299
               +IF + A +TG   PR  +P   I    ++    +++TGK PLI    V +      +
Sbjct:   235 LREIFALLARLTGIPAPRVRLPHTPILMAAYVNEALAKLTGKEPLIPLAGVQMAKKFMFF 294

Query:   300 SCVKAKTELGYNPRSLKEGLQEVLPWLRSSG 330
                KA  ELG   R   + L+  + W R++G
Sbjct:   295 ESSKATGELGLQRRPAVDALRRAVEWFRANG 325

GO:0006694 "steroid biosynthetic process" evidence=ISS

GO:0045552 "dihydrokaempferol 4-reductase activity" evidence=ISS

UNIPROTKB|P96816 Rv0139 "Dihydroflavonol-4-reductase" [Mycobacterium tuberculosis H37Rv (taxid:83332)]

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 107/330 (32%), Positives = 167/330 (50%)

Query:     4 LVSGASGYLGGRLCHALLK----QGHSVRALVR---RTSDISGLPSEGALELVYGDVTDY 56
             LV GA+G+LG  +   L+     Q   VRA+VR    T  I  LP    L   +GDV D 
Sbjct:     6 LVIGANGFLGSHVTRQLVADCAPQKGEVRAMVRPAANTRSIDDLP----LTRFHGDVFDT 61

Query:    57 RSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
              ++ +A  GC  +++       WL DPS  F  NV GL+NV+  A +  ++ + ++TSS+
Sbjct:    62 ATVAEAMAGCDDVYYCVVDTRAWLRDPSPLFRTNVAGLRNVLDVATDA-SLRRFVFTSSY 120

Query:   117 FALGSTDGYIA-DENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPIVPVYPGVIYGP 174
               +G   G++A +E++V   K   T Y RS+  A+ + LQ A + GLP V +     YG 
Sbjct:   121 ATVGRRRGHVATEEDRVDTRKV--TPYVRSRVAAEDLVLQYAHDAGLPAVAMCVSTTYGG 178

Query:   175 G---KLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERY 231
             G   +   G  +A  +     GRLP +   G  R     VDD     I A E+GR+GERY
Sbjct:   179 GDWGRTPHGAFIAGAVF----GRLP-FTMRGI-RLEAVGVDDAARALILAAERGRNGERY 232

Query:   232 LLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVH 291
             L++       ++  +AA   G   PR+ I + ++ A G +    +R+TGK   +S  +V 
Sbjct:   233 LISERMMPLQEVVRIAADEAGVPPPRWSISVPVLYALGALGSLRARLTGKDTELSLASVR 292

Query:   292 VLAHQWAYSCVKAKTELGYNPRSLKEGLQE 321
             ++  +      KA  ELG+ PR ++E ++E
Sbjct:   293 MMRSEADVDHGKAVRELGWQPRPVEESIRE 322

GO:0005618 "cell wall" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

ZFIN|ZDB-GENE-050417-163 nsdhl "NAD(P) dependent steroid dehydrogenase-like" [Danio rerio (taxid:7955)]

 Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
 Identities = 109/345 (31%), Positives = 164/345 (47%)

Query:     5 VSGASGYLGGRLCHALLKQGHSVRAL-VRRTSDISGLPSEGALELVYGDVTDYRSLVDAC 63
             V G SG+LG  L   L+ +G++V    +R+  ++ G+          GD+ D  +LV A 
Sbjct:    14 VIGGSGFLGRHLVERLVDRGYTVNVFDIRQAYELPGVT------FYQGDLCDKLALVMAL 67

Query:    64 FGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL-GST 122
                 ++FH A+   P   D + F  VN++G + V+QA  E   V+K+I TSS   +   T
Sbjct:    68 KEVSIVFHCASPA-PGSDDGALFQRVNIDGTRTVIQACHEAG-VQKLILTSSASVVFEGT 125

Query:   123 DGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE--GLPIVPVYPGVIYGPGKLTTG 180
             D     E+  + +K     Y  +K   +K+ L+A S+  G   V + P  I+GP      
Sbjct:   126 DIKNGKEDLPYAKKPI-DYYTETKIKQEKLVLEACSKEKGFLTVAIRPHGIFGP---RDP 181

Query:   181 NLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAME--KGRS---GERYLLTG 235
              LV  L+     G++   IG G++   F +V++VV GHI A E  K  S   G+ Y +T 
Sbjct:   182 QLVPILVDTARRGKMKFIIGDGSNLVDFTYVENVVHGHILAAEHLKADSPLCGQAYHITN 241

Query:   236 -ENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISY-PTVH-- 291
              E   F        V  G S PR+ +P  L+     +L F S I    PLI + PT    
Sbjct:   242 DEPVRFWDFMSQILVGLGYSAPRYHLPYALVYGIALLLWFISLILR--PLIQFKPTFSPM 299

Query:   292 --VLA--HQWAYSCVKAKTELGYNPR-SLKEGLQ---EVLPWLRS 328
                LA  H + YSC +AK ++GY P   L+E +    E  P LR+
Sbjct:   300 RVALAGTHHY-YSCARAKQDMGYRPLVPLQEAVVRTVESYPHLRN 343

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|O53454 MT1137 "3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 101/345 (29%), Positives = 164/345 (47%)

Query:     2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
             ++LV+G +G++G  L   LL +GH VR+  R  S    LP+   LE++ GD+TD      
Sbjct:    16 RVLVTGGAGFVGANLVTTLLDRGHWVRSFDRAPSL---LPAHPQLEVLQGDITDADVCAA 72

Query:    62 ACFGCHVIFHTAALVEPW----LPDP--SRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
             A  G   IFHTAA++E      + D    R FAVNV G +N++ A +    V++ +YTSS
Sbjct:    73 AVDGIDTIFHTAAIIELMGGASVTDEYRQRSFAVNVGGTENLLHAGQRAG-VQRFVYTSS 131

Query:   116 -FFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIAL-QAASEGLPIVPVYPGVIYG 173
                 +G  +    DE   + ++ F   Y  +K VA++  L Q   +G+    + P  I+G
Sbjct:   132 NSVVMGGQNIAGGDETLPYTDR-FNDLYTETKVVAERFVLAQNGVDGMLTCAIRPSGIWG 190

Query:   174 PGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAA----MEKGRS-G 228
              G  T   +  KL      G +   +G  + R    +V +++ G I A    +  G + G
Sbjct:   191 NGDQT---MFRKLFESVLKGHVKVLVGRKSARLDNSYVHNLIHGFILAAAHLVPDGTAPG 247

Query:   229 ERYLLTGENASFMQIFDMAAVIT---GTSRPRFCI--PL--WLIEAYGWILVFFSRITGK 281
             + Y +   +A  + +F+ A  +    G   P+  I  P   W++   GW  + F R    
Sbjct:   248 QAYFIN--DAEPINMFEFARPVLEACGQRWPKMRISGPAVRWVMT--GWQRLHF-RFGFP 302

Query:   282 LPLISYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPW 325
              PL+    V  L     +S  KA+ +LGY P  + ++ L E LP+
Sbjct:   303 APLLEPLAVERLYLDNYFSIAKARRDLGYEPLFTTQQALTECLPY 347

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IDA

GO:0004769 "steroid delta-isomerase activity" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0008202 "steroid metabolic process" evidence=IDA

GO:0030283 "testosterone dehydrogenase [NAD(P)

GO:0070403 "NAD+ binding" evidence=IDA

TIGR_CMR|BA_3248 BA_3248 "3-beta hydroxysteroid dehydrogenase/isomerase family protein" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 88/337 (26%), Positives = 159/337 (47%)

Query:     1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
             MK+LV+G +G+LG +L   L   G+ V A   R   I  +  +  ++ V+  + D   ++
Sbjct:     1 MKMLVTGGTGFLGQKLAFRLKNMGYEVTA-TGRNKTIGKVLEQNGIKFVHCPLEDRERVL 59

Query:    61 DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS---FF 117
               C     IFH+ A   PW      F+  NV G K++++ +++   ++++I+ S+   +F
Sbjct:    60 QVCKDKDYIFHSGAHSSPW-GKYEDFYNANVLGTKHIIEGSQKYG-IKRLIHVSTPSIYF 117

Query:   118 ALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKL 177
                     +  EN    +  F   Y  +K +A++   QA + GLP++ + P  ++GPG  
Sbjct:   118 YYDERQNVV--ENAKLPDT-FVNHYATTKYMAEQAIDQAFAHGLPVITIRPRALFGPGD- 173

Query:   178 TTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAME--KGRSGERYLLTG 235
                 ++ +L+     G LP  IG  N      +V++VVD  +  M   K   G++Y +T 
Sbjct:   174 --NAILPRLIKVCEKGALPR-IGTENVLVDITYVENVVDALLLCMHSPKHTLGQKYNITN 230

Query:   236 -ENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSR--ITGKLPLISYPTVHV 292
              E  +  ++ +              I          IL   S+  + GK P+++  TV V
Sbjct:   231 DERINLYEVIENVMKRLDKEVRYKKISYKTAFTLAAILEGISKTILFGKEPILTKYTVSV 290

Query:   293 LAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRS 328
             L+     S  KAK ELGY P+ S++EG+ + + W ++
Sbjct:   291 LSKSQTLSIDKAKEELGYAPKVSIEEGITKFVDWWKT 327

GO:0006694 "steroid biosynthetic process" evidence=ISS

GO:0030283 "testosterone dehydrogenase [NAD(P)

UNIPROTKB|E1C279 NSDHL "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
 Identities = 106/347 (30%), Positives = 162/347 (46%)

Query:     2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
             K +V G SG+LG  +   LL +G+SV        DI        ++   GD+ +  +L+ 
Sbjct:    11 KCVVIGGSGFLGQHMVEKLLDKGYSVNVF-----DIQKRFDHDRVQFFLGDLCNKEALLP 65

Query:    62 ACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL-G 120
             A     V FH A+   P   +   F+ VN  G K V++A KE   V+K++ TSS   +  
Sbjct:    66 ALQDVSVAFHCASPA-PSSDNKELFYKVNFMGTKAVIEACKEAG-VQKLVLTSSASVVFE 123

Query:   121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQA--ASEGLPIVPVYPGVIYGPGKLT 178
              TD     E+  + +K     Y  +K + +K  L A           + P  I+GP    
Sbjct:   124 GTDIKNGTEDLPYAKKPI-DYYTETKILQEKEVLSANDPDNNFFTTAIRPHGIFGP---R 179

Query:   179 TGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRS-----GERYLL 233
                LV  L+    +G++   IG G +   F +V++VV GHI A E  R      G+ + +
Sbjct:   180 DPQLVPILIQAAKSGKMKFIIGDGKNLVDFTYVENVVHGHILAAEHLRKDSPVCGKAFHI 239

Query:   234 TGENASFMQIFDMAAVITGTS--RPRFCIPLWLIEAYGWILVFFSRITGKL-PLISY-PT 289
             T +       F M+ ++TG +   P++ IP WL  AY ++ +F S +   L PLI   PT
Sbjct:   240 TNDEPIPFWAF-MSRILTGLNYDAPKYYIPYWL--AY-YLALFLSLVLWLLSPLIIIKPT 295

Query:   290 ---VHV-LAHQWAY-SCVKAKTELGYNPR-SLKEGLQEVL---PWLR 327
                + V LA  + Y SC +AK ++GY P  SL E +   L   P LR
Sbjct:   296 FTPMRVALAGTFHYYSCERAKRDMGYKPVVSLDEAIDRTLQSYPHLR 342

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0001942 "hair follicle development" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005811 "lipid particle" evidence=IEA

GO:0007224 "smoothened signaling pathway" evidence=IEA

GO:0008203 "cholesterol metabolic process" evidence=IEA

GO:0060716 "labyrinthine layer blood vessel development" evidence=IEA

WB|WBGene00017429 F13D11.4 [Caenorhabditis elegans (taxid:6239)]

 Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
 Identities = 103/353 (29%), Positives = 149/353 (42%)

Query:     2 KILVSGASGYLGGRLCHALLKQGHSVRALVR------RTSDISGLPSEGALELVYGDVTD 55
             K+LV+GASG++G      LLK G+ VR  VR      +   I  L  +  LELV  D+ D
Sbjct:     7 KVLVTGASGFIGTHCVEILLKNGYRVRGTVRDLNNKAKVQPIKKLDKKNHLELVEADLLD 66

Query:    56 YRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
                   A  GC  + H A+   P + D  R     VEG  NV++A  E   V K++ TSS
Sbjct:    67 STCWKKAVAGCDYVLHVASPF-PIVSD-ERCITTAVEGTMNVLKAIAEDGNVRKLVLTSS 124

Query:   116 FFAL--GSTDGYIADENQVHE-EKYFCTQYERSKAVADKIA---LQAASEG--LPIVPVY 167
               A+  G T   + DE+     E      Y +SK +A+K A   ++   E    P+  + 
Sbjct:   125 CAAVNEGYTQDRVFDEDSWSNLESDMVDCYIKSKTLAEKAAWDFIERLPEDKKFPMTVIN 184

Query:   168 PGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRS 227
             P +++GP  +T       LM +  NG +P              V DV   H  AM +  S
Sbjct:   185 PTLVFGPAYITEQGASITLMRKFMNGEMPAAPPLN---MPIVDVRDVALAHFEAMRRPES 241

Query:   228 -GERYLLTGENASFMQIFDMAAVIT------GTSRPRFCIPLWLIEAYGWILVFFSRITG 280
               ER L+T  N   M   D+A ++       G   PRF  P + +  Y    +F      
Sbjct:   242 DNERILVT--NVPSMWFIDIARILREEFKGKGYWIPRFTAPYFFVRLYA---LFDPETKA 296

Query:   281 KLPLISYPTVHVLAHQWAYSCVKAKTELGYNPRSLKEGLQEVLPWLRSSGMIK 333
              LP         L  +  +   KA+  LG   R  KE L ++   L   G+I+
Sbjct:   297 SLPR--------LCQEVKFDNSKAQRLLGMTMRDSKEALIDMAHSLIDLGIIE 341

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	334
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	1e-134
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	2e-91
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	1e-49
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	3e-40
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	6e-40
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	2e-39
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	3e-38
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	2e-36
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	8e-34
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	4e-30
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	3e-28
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	1e-27
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	1e-26
PLN02986	322	PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase	3e-26
cd09812	339	cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid	5e-26
cd08946	200	cd08946, SDR_e, extended (e) SDRs	3e-25
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	7e-24
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	9e-24
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	4e-23
TIGR04180	297	TIGR04180, EDH_00030, NAD dependent epimerase/dehy	6e-23
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	2e-22
PLN00198	338	PLN00198, PLN00198, anthocyanidin reductase; Provi	3e-21
PLN02583	297	PLN02583, PLN02583, cinnamoyl-CoA reductase	6e-21
PLN02662	322	PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase	3e-20
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	3e-20
PLN02650	351	PLN02650, PLN02650, dihydroflavonol-4-reductase	4e-19
PLN02989	325	PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase	1e-17
cd05230	305	cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase	1e-17
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	1e-17
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	2e-17
cd05235	290	cd05235, SDR_e1, extended (e) SDRs, subgroup 1	4e-17
TIGR01746	367	TIGR01746, Thioester-redct, thioester reductase do	5e-17
PLN02896	353	PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase	7e-17
COG3320	382	COG3320, COG3320, Putative dehydrogenase domain of	1e-16
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	5e-16
PLN02214	342	PLN02214, PLN02214, cinnamoyl-CoA reductase	5e-16
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	8e-16
cd09811	354	cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD	8e-16
cd05246	315	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra	9e-16
PLN02686	367	PLN02686, PLN02686, cinnamoyl-CoA reductase	1e-15
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	1e-15
COG1087	329	COG1087, GalE, UDP-glucose 4-epimerase [Cell envel	2e-15
TIGR01179	328	TIGR01179, galE, UDP-glucose-4-epimerase GalE	5e-15
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	1e-14
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	2e-14
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	2e-14
cd05260	316	cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase	3e-14
cd05247	323	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase,	4e-14
cd05238	305	cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n	3e-13
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	9e-13
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	2e-12
cd05254	280	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4	1e-11
pfam05368	232	pfam05368, NmrA, NmrA-like family	1e-11
cd05253	332	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera	2e-11
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	2e-11
COG1091	281	COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C	4e-11
cd05259	282	cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe	1e-10
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	1e-10
PRK10675	338	PRK10675, PRK10675, UDP-galactose-4-epimerase; Pro	2e-10
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	2e-10
cd05266	251	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4	4e-10
PRK05865	854	PRK05865, PRK05865, hypothetical protein; Provisio	1e-09
pfam02719	280	pfam02719, Polysacc_synt_2, Polysaccharide biosynt	1e-09
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	2e-09
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	3e-09
cd05242	296	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	1e-08
cd08957	307	cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic	4e-08
COG1088	340	COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cel	7e-08
cd05273	328	cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-	1e-07
COG1086	588	COG1086, COG1086, Predicted nucleoside-diphosphate	1e-07
cd05237	287	cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l	1e-07
CHL00194	317	CHL00194, ycf39, Ycf39; Provisional	1e-07
cd05236	320	cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F	2e-07
cd05272	308	cd05272, TDH_SDR_e, L-threonine dehydrogenase, ext	3e-07
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	3e-07
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	9e-07
COG2910	211	COG2910, COG2910, Putative NADH-flavin reductase [	1e-06
pfam04321	284	pfam04321, RmlD_sub_bind, RmlD substrate binding d	2e-06
TIGR01181	317	TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehyd	2e-06
cd05252	336	cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydrata	4e-06
COG1090	297	COG1090, COG1090, Predicted nucleoside-diphosphate	2e-05
PLN02657	390	PLN02657, PLN02657, 3,8-divinyl protochlorophyllid	3e-05
cd05261	248	cd05261, CAPF_like_SDR_e, capsular polysaccharide	3e-05
PLN02166	436	PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase	5e-05
cd05248	317	cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannohepto	5e-05
TIGR02622	349	TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydra	6e-05
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	7e-05
TIGR03589	324	TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehyd	8e-05
TIGR04130	337	TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehyd	1e-04
COG1089	345	COG1089, Gmd, GDP-D-mannose dehydratase [Cell enve	2e-04
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	2e-04
cd08947	224	cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptio	2e-04
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	5e-04
PLN00141	251	PLN00141, PLN00141, Tic62-NAD(P)-related group II	5e-04
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	0.001
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	0.001
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	0.001
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	0.002
TIGR03443	1389	TIGR03443, alpha_am_amid, L-aminoadipate-semialdeh	0.002
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	0.002
TIGR01214	287	TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase	0.002
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	0.002
cd05239	300	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte	0.002

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score =  384 bits (989), Expect = e-134
 Identities = 146/324 (45%), Positives = 190/324 (58%), Gaps = 6/324 (1%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           ILV+GA+G+LG  L  ALL QG+ VRALVR  SD   L     +E+V GD+TD  SL  A
Sbjct: 1   ILVTGATGFLGSNLVRALLAQGYRVRALVRSGSDAVLLDGLP-VEVVEGDLTDAASLAAA 59

Query: 63  CFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST 122
             GC  +FH AA    W  D    +  NVEG +NV+ AA E   V ++++TSS  ALG  
Sbjct: 60  MKGCDRVFHLAAFTSLWAKDRKELYRTNVEGTRNVLDAALEAG-VRRVVHTSSIAALGGP 118

Query: 123 DGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNL 182
                DE     E+ F   Y RSK +A+   L+AA+EGL +V V P  ++GPG       
Sbjct: 119 PDGRIDETTPWNERPFPNDYYRSKLLAELEVLEAAAEGLDVVIVNPSAVFGPGDEG-PTS 177

Query: 183 VAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTGENASFMQ 242
               +++  NG+LP Y   G    SF  V DV +GHIAAMEKGR GERY+L GEN SF Q
Sbjct: 178 TGLDVLDYLNGKLPAYPPGG---TSFVDVRDVAEGHIAAMEKGRRGERYILGGENLSFKQ 234

Query: 243 IFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCV 302
           +F+  A ITG   PR  IP WL++A   +    +R+TGK PL++  T  VL   + YS  
Sbjct: 235 LFETLAEITGVKPPRRTIPPWLLKAVAALSELKARLTGKPPLLTPRTARVLRRNYLYSSD 294

Query: 303 KAKTELGYNPRSLKEGLQEVLPWL 326
           KA+ ELGY+PR L+E L++ L WL
Sbjct: 295 KARRELGYSPRPLEEALRDTLAWL 318

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score =  275 bits (706), Expect = 2e-91
 Identities = 137/338 (40%), Positives = 194/338 (57%), Gaps = 16/338 (4%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MK+LV+GA+G++G  +   LL+QG  VR LVR TSD   L      E+V GD+ D  SL 
Sbjct: 1   MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDV-EIVEGDLRDPASLR 59

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
            A  GC  +FH AA    W PDP   +A NVEG +N+++AA E   VE+++YTSS   LG
Sbjct: 60  KAVAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEAG-VERVVYTSSVATLG 118

Query: 121 -STDGYIADEN-QVHEEKYFCTQYERSKAVADKIALQAASE-GLPIVPVYPGVIYGPG-- 175
              DG  ADE      +      Y+RSK +A++ AL+ A+E GLP+V V P    GP   
Sbjct: 119 VRGDGTPADETTPSSLDD-MIGHYKRSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDI 177

Query: 176 KLT-TGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLT 234
           K T TG ++    ++  NG++P Y+   +   +  HVDDV +GH+ A+E+GR GERY+L 
Sbjct: 178 KPTPTGRII----VDFLNGKMPAYV---DTGLNLVHVDDVAEGHLLALERGRIGERYILG 230

Query: 235 GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLA 294
           GEN +  QI D  A ITG   PR  +P WL+    W     +R+TGK P ++   V +  
Sbjct: 231 GENLTLKQILDKLAEITGRPAPRVKLPRWLLLPVAWGAEALARLTGKEPRVTVDGVRMAK 290

Query: 295 HQWAYSCVKAKTELGYNPRSLKEGLQEVLPWLRSSGMI 332
            +  +S  KA  ELGY  R  +E L++ + W R++G +
Sbjct: 291 KKMFFSSAKAVRELGYRQRPAREALRDAVEWFRANGYL 328

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score =  167 bits (425), Expect = 1e-49
 Identities = 89/340 (26%), Positives = 140/340 (41%), Gaps = 42/340 (12%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           M+ILV+G +G++G  L   LL  GH VR L R        P    +E V  D+TD   + 
Sbjct: 1   MRILVTGGAGFIGSHLVERLLAAGHDVRGLDR--LRDGLDPLLSGVEFVVLDLTDRDLVD 58

Query: 61  DACFGCH-VIFHTAALVEPWL---PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
           +   G    + H AA          DP+ F  VNV+G  N+++AA+    V++ ++ SS 
Sbjct: 59  ELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG-VKRFVFASSV 117

Query: 117 FAL-GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPIVPVYPGVIYGP 174
             + G       DE+           Y  SK  A+++    A   GLP+V + P  +YGP
Sbjct: 118 SVVYGDPPPLPIDED--LGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGP 175

Query: 175 G--KLTTGNLVAKLMIERFNGR-LPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERY 231
           G     +  +V+  + +   G  +    G G+    F +VDDV D  + A+E    G   
Sbjct: 176 GDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDGGVFN 235

Query: 232 LLTGENA-SFMQIFDMAAVITGTSRPRF-CIPLWLIEAYGWILVFFSRITGKLPLISYPT 289
           + +G    +  ++ +  A   G+  P    IPL          +                
Sbjct: 236 IGSGTAEITVRELAEAVAEAVGSKAPLIVYIPLGRRGDLREGKLL--------------- 280

Query: 290 VHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRS 328
                        KA+  LG+ P+ SL+EGL + L WL  
Sbjct: 281 ----------DISKARAALGWEPKVSLEEGLADTLEWLLK 310

Length = 314

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score =  142 bits (361), Expect = 3e-40
 Identities = 96/331 (29%), Positives = 139/331 (41%), Gaps = 40/331 (12%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           K+LV+GA+G++G  L   LL +G  VR  VR     +  PS    EL   D     S  D
Sbjct: 1   KVLVTGANGFIGRALVDKLLSRGEEVRIAVRN--AENAEPSVVLAELPDID-----SFTD 53

Query: 62  ACFGCHVIFHTAALV---EPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
              G   + H AA V        DP S +  VN E  + + +AA     V++ ++ SS  
Sbjct: 54  LFLGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQ-GVKRFVFLSSVK 112

Query: 118 ALG-STDGYIADENQVHEEKYFCTQYERSKAVADKIALQA-ASEGLPIVPVYPGVIYGPG 175
             G  T G   DE      +     Y RSK  A++  L+  AS+G+ +V + P ++YGPG
Sbjct: 113 VNGEGTVGAPFDETDPPAPQ---DAYGRSKLEAERALLELGASDGMEVVILRPPMVYGPG 169

Query: 176 KLTTGNLVAKLM--IERFNGRLPGYIGYGNDRFSFCHVDDVVDGHI-AAMEKGRSGERYL 232
               GN  A+LM  I+R    LP   G   +R S   +D++VD           +   +L
Sbjct: 170 --VRGNF-ARLMRLIDRG---LPLPPGAVKNRRSLVSLDNLVDAIYLCISLPKAANGTFL 223

Query: 233 LT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVH 291
           ++ G   S  ++ D      G       +P  L            R   KL         
Sbjct: 224 VSDGPPVSTAELVDEIRRALGKPTRLLPVPAGL-----------LRFAAKLLGKRAVIQR 272

Query: 292 VLAHQWAYSCVKAKTELGYNPR-SLKEGLQE 321
           +      Y   K + ELG+ P  SL+EGLQE
Sbjct: 273 LFGSLQ-YDPEKTQNELGWRPPISLEEGLQE 302

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score =  141 bits (359), Expect = 6e-40
 Identities = 79/262 (30%), Positives = 130/262 (49%), Gaps = 23/262 (8%)

Query: 5   VSGASGYLGGRLCHALLKQGHSVRALVRRTSD------ISGLP-SEGALELVYGDVTDYR 57
           V+GASG++G  L   LL++G++VRA VR   D      +  L  ++  L+L   D+ DY 
Sbjct: 3   VTGASGFIGSWLVKRLLQRGYTVRATVRDPGDEKKVAHLLELEGAKERLKLFKADLLDYG 62

Query: 58  SLVDACFGCHVIFHTAALVEPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS- 115
           S   A  GC  +FH A+ V+    DP        V+G  NV++A  + K+V+++++TSS 
Sbjct: 63  SFDAAIDGCDGVFHVASPVDFDSEDPEEEMIEPAVKGTLNVLEACAKAKSVKRVVFTSSV 122

Query: 116 ---FFALGSTDGYIADENQ-VHEEKYFCTQYER----SKAVADKIALQAASE-GLPIVPV 166
               +     +G + DE+     +  FC + +     SK +A+K A + A E GL +V V
Sbjct: 123 AAVVWNPNRGEGKVVDESCWSDLD--FCKKTKLWYALSKTLAEKAAWEFAEENGLDLVTV 180

Query: 167 YPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR 226
            P ++ GP    + N  ++L++    G       Y N   +  HVDDV D HI   EK  
Sbjct: 181 NPSLVVGPFLQPSLNSSSQLILSLLKG---NAEMYQNGSLALVHVDDVADAHILLYEKPS 237

Query: 227 SGERYLLTGENASFMQIFDMAA 248
           +  RY+ +    +  ++  + A
Sbjct: 238 ASGRYICSSHVVTRPELAALLA 259

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score =  141 bits (357), Expect = 2e-39
 Identities = 100/338 (29%), Positives = 151/338 (44%), Gaps = 24/338 (7%)

Query: 3   ILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSD--ISGLPSEGALELVYGDVTDYRSL 59
           +LV+G SG+ G RL   LL++ G  VR+         +S       +E + GD+TD   +
Sbjct: 2   VLVTGGSGFFGERLVKQLLERGGTYVRSFDIAPPGEALSAWQHPN-IEFLKGDITDRNDV 60

Query: 60  VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF-FA 118
             A  G   +FHTAA+V    P    ++ VNV G +NV+ A +    V+K +YTSS    
Sbjct: 61  EQALSGADCVFHTAAIVPLAGPR-DLYWEVNVGGTQNVLDACQRCG-VQKFVYTSSSSVI 118

Query: 119 LGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA-ASEGLPIVPVYPGVIYGPGKL 177
            G  + +  DE   +        Y  +KA+A+ I L+A   + L    + P  I+GPG  
Sbjct: 119 FGGQNIHNGDETLPYPPL-DSDMYAETKAIAEIIVLEANGRDDLLTCALRPAGIFGPGDQ 177

Query: 178 TTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAME-----KGRSGERYL 232
               LV  L      G +    G GN+   F +V ++   HI A       K  SG+ Y 
Sbjct: 178 G---LVPILFEWAEKGLVKFVFGRGNNLVDFTYVHNLAHAHILAAAALVKGKTISGQTYF 234

Query: 233 LTGENASFMQIFDMAAVITG----TSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYP 288
           +T  +A    +F++   +       SRP+  +   L      +    S + G   + S  
Sbjct: 235 IT--DAEPHNMFELLRPVWKALGFGSRPKIRLSGPLAYCAALLSELVSFMLGPYFVFSPF 292

Query: 289 TVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPW 325
            V  L     +S  KA+ +LGY PR S +EGL E L W
Sbjct: 293 YVRALVTPMYFSIAKAQKDLGYAPRYSNEEGLIETLNW 330

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score =  135 bits (342), Expect = 3e-38
 Identities = 66/236 (27%), Positives = 101/236 (42%), Gaps = 13/236 (5%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           ILV+G +G++G  L   LL++G+ V  L RR    S   + G +    GD+TD  +L   
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRR--SESLNTGRIRFHEGDLTDPDALERL 58

Query: 63  CFGC--HVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA 118
                   + H AA   V     DP+ F   NV G   +++AA+    V++ ++ SS   
Sbjct: 59  LAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRAG-VKRFVFASSSEV 117

Query: 119 LGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPIVPVYPGVIYGPGKL 177
            G        E+         + Y  +K  A+++    A   GL  V +    +YGPG  
Sbjct: 118 YGDVADPPITEDTPL---GPLSPYAAAKLAAERLVEAYARAYGLRAVILRLFNVYGPGNP 174

Query: 178 TTG-NLVAKLMIERF-NGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERY 231
                 V   +I R   G+    +G G  R  F +VDDV    + A+E    GE Y
Sbjct: 175 DPFVTHVIPALIRRILEGKPILLLGDGTQRRDFLYVDDVARAILLALEHPDGGEIY 230

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score =  132 bits (335), Expect = 2e-36
 Identities = 77/273 (28%), Positives = 125/273 (45%), Gaps = 36/273 (13%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-------PSEGALELV-YGDV 53
            +LV+GA+G++   +   LLK G+ VR  VR  S  + L            LE V   D+
Sbjct: 1   LVLVTGATGFIASHIVEQLLKAGYKVRGTVRSLSKSAKLKALLKAAGYNDRLEFVIVDDL 60

Query: 54  TDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFA-VNVEGLKNVVQAAKETKTVEKIIY 112
           T   +  +A  G   + H A+      PD         VEG  NV++AAK   +V++++ 
Sbjct: 61  TAPNAWDEALKGVDYVIHVASPFPFTGPDAEDDVIDPAVEGTLNVLEAAKAAGSVKRVVL 120

Query: 113 TSSFFALGSTDGYIADENQVHEEK-----YFCTQ-----YERSKAVADKIA---LQAASE 159
           TSS  A+G  D    D  +V  E+               Y  SK +A+K A   ++    
Sbjct: 121 TSSVAAVG--DPTAEDPGKVFTEEDWNDLTISKSNGLDAYIASKTLAEKAAWEFVKENKP 178

Query: 160 GLPIVPVYPGVIYGP----GKLTTGN-LVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV 214
              ++ + PG + GP     +L + N L+ KL+    +G+LP      N  F +  V DV
Sbjct: 179 KFELITINPGYVLGPSLLADELNSSNELINKLL----DGKLPA--IPPNLPFGYVDVRDV 232

Query: 215 VDGHIAAMEKG-RSGERYLLTGENASFMQIFDM 246
            D H+ A+E    +G+R++++    SF +I D+
Sbjct: 233 ADAHVRALESPEAAGQRFIVSAGPFSFQEIADL 265

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score =  125 bits (316), Expect = 8e-34
 Identities = 68/264 (25%), Positives = 115/264 (43%), Gaps = 21/264 (7%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS------GLPS-EGALELVYGDVTD 55
           +LV+GASG++   +   LL++G+ VRA VR  S +        L +  G LEL   D+TD
Sbjct: 1   VLVTGASGFVASHVVEQLLERGYKVRATVRDPSKVKKVNHLLDLDAKPGRLELAVADLTD 60

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
            +S  +   GC  +FH A  V     DP+      + G  N ++AA   K+V++ + TSS
Sbjct: 61  EQSFDEVIKGCAGVFHVATPVSFSSKDPNEVIKPAIGGTLNALKAAAAAKSVKRFVLTSS 120

Query: 116 FFALG----STDGYIADENQVHEEKYFCTQ-------YERSKAVADKIALQAASE-GLPI 163
             ++     + +G + DE   + E+ F +        Y  SK +A+K A + A E  + +
Sbjct: 121 AGSVLIPKPNVEGIVLDEKSWNLEE-FDSDPKKSAWVYAASKTLAEKAAWKFADENNIDL 179

Query: 164 VPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYG-NDRFSFCHVDDVVDGHIAAM 222
           + V P +  G    +     +   +    G               + HV D+   HI  +
Sbjct: 180 ITVIPTLTIGTIFDSETPSSSGWAMSLITGNEGVSPALALIPPGYYVHVVDICLAHIGCL 239

Query: 223 EKGRSGERYLLTGENASFMQIFDM 246
           E   +  RY+ T  N  +  +   
Sbjct: 240 ELPIARGRYICTAGNFDWNTLLKT 263

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score =  116 bits (293), Expect = 4e-30
 Identities = 107/346 (30%), Positives = 166/346 (47%), Gaps = 38/346 (10%)

Query: 4   LVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           LV G SG+LG  L   LL++G+ +V     R +      S G ++   GD+TD + L  A
Sbjct: 3   LVVGGSGFLGRHLVEQLLRRGNPTVHVFDIRPTFELDPSSSGRVQFHTGDLTDPQDLEKA 62

Query: 63  --CFGCHVIFHTAALVEPWLPDPSR----FFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
               G +V+FHTA+      PD       ++ VNV+G +NV++A ++   V+K++YTSS 
Sbjct: 63  FNEKGPNVVFHTAS------PDHGSNDDLYYKVNVQGTRNVIEACRKC-GVKKLVYTSSA 115

Query: 117 FAL-GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE--GLPIVPVYPGVIYG 173
             +    D    DE+  + +K     Y  +KA+A+K+ L+A     GL    + P  I+G
Sbjct: 116 SVVFNGQDIINGDESLPYPDK-HQDAYNETKALAEKLVLKANDPESGLLTCALRPAGIFG 174

Query: 174 PG--KLTTGNL-VAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEK-GRSGE 229
           PG  +L  G L  AK      NG+    IG GN+ F F +V++V   HI A +    S  
Sbjct: 175 PGDRQLVPGLLKAAK------NGKTKFQIGDGNNLFDFTYVENVAHAHILAADALLSSSH 228

Query: 230 RYLLTGE-----NASFMQIFDMAAVI---TGTSR-PRFCIPLWLIEAYGWILVFFSRITG 280
              + GE     N   +  +D A  I    G  R P   +P  +      +L +  ++ G
Sbjct: 229 AETVAGEAFFITNDEPIYFWDFARAIWEGLGYERPPSIKLPRPVALYLASLLEWTCKVLG 288

Query: 281 KLPLISYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPW 325
           K P  +   V +L     ++  KAK  LGY P  +L+EG++  L W
Sbjct: 289 KEPTFTPFRVALLCSTRYFNIEKAKKRLGYTPVVTLEEGIERTLQW 334

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score =  111 bits (279), Expect = 3e-28
 Identities = 90/345 (26%), Positives = 137/345 (39%), Gaps = 50/345 (14%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-GLPSE---GALELVYGDVTDYR 57
            +LV+GA G++G  L   LL++GH VRAL    S  S GL           + GDV D  
Sbjct: 1   NVLVTGADGFIGSHLTERLLREGHEVRALDIYNSFNSWGLLDNAVHDRFHFISGDVRDAS 60

Query: 58  SLVDACFGCHVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
            +      C V+FH AAL+        P  +   NV G  NV++AA      +++++TS+
Sbjct: 61  EVEYLVKKCDVVFHLAALIAIPYSYTAPLSYVETNVFGTLNVLEAACV-LYRKRVVHTST 119

Query: 116 FFALGSTDGYIADENQVHEEKYFCTQ---YERSKAVADKIALQ-AASEGLPIVPVYPGVI 171
               G+      DE+  H   Y       Y  SK  AD++A     S GLP+  + P   
Sbjct: 120 SEVYGTAQDVPIDED--HPLLYINKPRSPYSASKQGADRLAYSYGRSFGLPVTIIRPFNT 177

Query: 172 YGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERY 231
           YGP   +   ++  ++ +R  G+    +G G+    F  V D   G I       + E  
Sbjct: 178 YGPR-QSARAVIPTIISQRAIGQRLINLGDGSPTRDFNFVKDTARGFIDI---LDAIEAV 233

Query: 232 LLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVH 291
                N S  +   +                                 G++ LI Y    
Sbjct: 234 GEIINNGS-GEEISIGNPAVELIV---------------------EELGEMVLIVYDDHR 271

Query: 292 VLAHQWAYSCV--------KAKTELGYNP-RSLKEGLQEVLPWLR 327
              ++  YS V        KAK  LG+ P  SL++GL+E + W +
Sbjct: 272 --EYRPGYSEVERRIPDIRKAKRLLGWEPKYSLRDGLRETIEWFK 314

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score =  109 bits (275), Expect = 1e-27
 Identities = 89/338 (26%), Positives = 141/338 (41%), Gaps = 49/338 (14%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRAL----VRRTSDISGLPSEGALELVYGDVTDYR 57
           ++LV+G +G++G  L   LL++GH V  L      +  ++     +  ++ + GD+ D  
Sbjct: 1   RVLVTGGAGFIGSHLVERLLERGHEVIVLDNLSTGKKENLP--EVKPNVKFIEGDIRDDE 58

Query: 58  SLVDACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
            +  A  G   +FH AA   V   + DP +   VNV G  N+++AA++   V++ +Y SS
Sbjct: 59  LVEFAFEGVDYVFHQAAQASVPRSIEDPIKDHEVNVLGTLNLLEAARKAG-VKRFVYASS 117

Query: 116 FFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIA-LQAASEGLPIVPVYPGVIYGP 174
               G       DE+           Y  SK   +    + A   GLP V +    +YGP
Sbjct: 118 SSVYGDPPYLPKDEDHPPNPLS---PYAVSKYAGELYCQVFARLYGLPTVSLRYFNVYGP 174

Query: 175 GKLTTG--NLVAKLMIERFNGRLPGYI-GYGNDRFSFCHVDDVVDGHIAAMEKGRSGERY 231
            +   G    V  + IER     P  I G G     F +V+DVV+ ++ A   G  GE Y
Sbjct: 175 RQDPNGGYAAVIPIFIERALKGEPPTIYGDGEQTRDFTYVEDVVEANLLAATAGAGGEVY 234

Query: 232 -LLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISY--P 288
            + TG+  S  ++ ++                               I GK     Y  P
Sbjct: 235 NIGTGKRTSVNELAEL----------------------------IREILGKELEPVYAPP 266

Query: 289 TVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPW 325
               + H  A    KAK  LG+ P+ S +EGL+  + W
Sbjct: 267 RPGDVRHSLA-DISKAKKLLGWEPKVSFEEGLRLTVEW 303

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score =  106 bits (266), Expect = 1e-26
 Identities = 70/280 (25%), Positives = 118/280 (42%), Gaps = 31/280 (11%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEG---ALELVYGDVTDYR 57
           M + V GA+G++G  + + L K+G  V    R  +    L   G    +  V  D+ D  
Sbjct: 1   MVVTVFGATGFIGRYVVNRLAKRGSQVIVPYRCEAYARRLLVMGDLGQVLFVEFDLRDDE 60

Query: 58  SLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
           S+  A  G  V+ +    +  +      F  V+VEG + + +AAKE   VE++I+ S   
Sbjct: 61  SIRKALEGSDVVINLVGRL--YETKNFSFEDVHVEGPERLAKAAKEAG-VERLIHIS--- 114

Query: 118 ALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKL 177
           ALG      AD N         ++Y RSKA  ++ A++ A     I  V P V++G    
Sbjct: 115 ALG------ADANSP-------SKYLRSKAEGEE-AVREAFPEATI--VRPSVVFGRE-- 156

Query: 178 TTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRS-GERYLLTGE 236
                + +          P  IG G  +F   +V DV +    A++   + G+ Y L G 
Sbjct: 157 --DRFLNRFAKLLAFLPFPPLIGGGQTKFQPVYVGDVAEAIARALKDPETEGKTYELVGP 214

Query: 237 NA-SFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFF 275
              +  ++ ++   + G  R    +PLWL      + +  
Sbjct: 215 KVYTLAELVELLRRLGGRKRRVLPLPLWLARLIARVKLLL 254

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|178567 PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase family protein

 Score =  106 bits (265), Expect = 3e-26
 Identities = 82/262 (31%), Positives = 130/262 (49%), Gaps = 23/262 (8%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGA---LELVYGDVTD 55
           + V+GASGY+   +   LL +G++V+A VR  +D       L  +GA   L+L   D+ +
Sbjct: 8   VCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLE 67

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
             S   A  GC  +FHTA+ V   + DP +      ++G  NV+   KET +V+++I TS
Sbjct: 68  ESSFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTS 127

Query: 115 SFFALGSTDGYIADENQVHEEKYF-----CTQ----YERSKAVADKIALQAASE-GLPIV 164
           S  A+      I + N V +E +F     C +    Y  SK +A+  A + A + G+ +V
Sbjct: 128 STAAVLFRQPPI-EANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDNGIDMV 186

Query: 165 PVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEK 224
            + PG I GP    T N   +L+++  NG+      + N  + F  V DV   HI A+E 
Sbjct: 187 VLNPGFICGPLLQPTLNFSVELIVDFINGKNL----FNNRFYRFVDVRDVALAHIKALET 242

Query: 225 GRSGERYLLTGENASFMQIFDM 246
             +  RY++ G   S   I D+
Sbjct: 243 PSANGRYIIDGPIMSVNDIIDI 264

Length = 322

>gnl|CDD|187672 cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid dehydrogenase (3b-HSD)-like, subgroup1, extended (e) SDRs

 Score =  105 bits (264), Expect = 5e-26
 Identities = 95/369 (25%), Positives = 145/369 (39%), Gaps = 76/369 (20%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
            +L++G  GY G RL  AL K G  V  L         LP    ++ +  DV D   L  
Sbjct: 1   SVLITGGGGYFGFRLGCALAKSGVHV-ILFDIRRPQQELPEG--IKFIQADVRDLSQLEK 57

Query: 62  ACFGCHVIFHTAA------------LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEK 109
           A  G   +FH A+            L+E           +NV G +N++Q     + V +
Sbjct: 58  AVAGVDCVFHIASYGMSGREQLNRELIE----------EINVRGTENIIQVCVRRR-VPR 106

Query: 110 IIYTSSF-FALGSTDGYIADEN----QVHEEKYFCTQYERSKAVADKIALQAASEGLP-- 162
           +IYTS+F    G       DE+     +         Y R+K++A+++ L+A +  LP  
Sbjct: 107 LIYTSTFNVIFGGQPIRNGDESLPYLPLDL---HVDHYSRTKSIAEQLVLKANNMPLPNN 163

Query: 163 -----IVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRF---------SF 208
                   + P  IYGPG+            +R   R+  YI  G   F          F
Sbjct: 164 GGVLRTCALRPAGIYGPGE------------QRHLPRIVSYIEKGLFMFVYGDPKSLVEF 211

Query: 209 CHVDDVVDGHIAAMEKGR-------SGERYLLT-GENASFMQIFDMAAVITGTSRPRFCI 260
            HVD++V  HI A E          SG+ Y ++ G   +  + F       G S P   +
Sbjct: 212 VHVDNLVQAHILAAEALTTAKGYIASGQAYFISDGRPVNNFEFFRPLVEGLGYSFPSLRL 271

Query: 261 PLWLIEAYG----WILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPRSLK 316
           PL L+  +      +      I    PL++   V+       +S  KA+ ELGY P+   
Sbjct: 272 PLSLVYFFAFLTEMVHFALGPICNFQPLLTRTEVYKTGVTHYFSIEKARAELGYEPQPFD 331

Query: 317 EGLQEVLPW 325
             LQ+ + W
Sbjct: 332 --LQDAVEW 338

An uncharacterized subgroup of the 3b-HSD-like extended-SDR family. Proteins in this subgroup have the characteristic active site tetrad and NAD(P)-binding motif of extended-SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 339

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score =  100 bits (250), Expect = 3e-25
 Identities = 64/234 (27%), Positives = 96/234 (41%), Gaps = 42/234 (17%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           ILV+G +G++G  L   LL++GH V  + R                              
Sbjct: 1   ILVTGGAGFIGSHLVRRLLERGHEVVVIDRLD---------------------------- 32

Query: 63  CFGCHVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
                V+ H AALV       +P   F  NV G  N+++AA++   V++ +Y SS    G
Sbjct: 33  -----VVVHLAALVGVPASWDNPDEDFETNVVGTLNLLEAARKAG-VKRFVYASSASVYG 86

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQ-AASEGLPIVPVYPGVIYGPGKLTT 179
           S +G   +E          + Y  SK  A+ +      S GLP+V +    +YGPG+   
Sbjct: 87  SPEGLPEEE---ETPPRPLSPYGVSKLAAEHLLRSYGESYGLPVVILRLANVYGPGQRPR 143

Query: 180 GNLVAKLMIERFNGRLPGYIGYGNDRF-SFCHVDDVVDGHIAAMEKG-RSGERY 231
            + V    I R     P  +  G ++   F HVDDVV   + A+E     G  Y
Sbjct: 144 LDGVVNDFIRRALEGKPLTVFGGGNQTRDFIHVDDVVRAILHALENPLEGGGVY 197

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 96.5 bits (241), Expect = 7e-24
 Identities = 54/168 (32%), Positives = 77/168 (45%), Gaps = 19/168 (11%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           K+LV GA+G +G  +   LL +G+ VRALVR  S    L + GA E+V GD+TD  SL  
Sbjct: 1   KVLVVGATGKVGRHVVRELLDRGYQVRALVRDPSQAEKLEAAGA-EVVVGDLTDAESLAA 59

Query: 62  ACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS 121
           A  G   +   A           R  AV+ +G  N++ AAK+   V++ +  SS   +G+
Sbjct: 60  ALEGIDAVISAAGSGG---KGGPRTEAVDYDGNINLIDAAKKAG-VKRFVLVSS---IGA 112

Query: 122 TDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPG 169
                  E            Y  +K  A+   L+A   GL    V PG
Sbjct: 113 DKPSHPLEALGP--------YLDAKRKAEDY-LRA--SGLDYTIVRPG 149

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 98.6 bits (246), Expect = 9e-24
 Identities = 68/241 (28%), Positives = 104/241 (43%), Gaps = 22/241 (9%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVY-GDVTDYRSL 59
           MK+ V+GA+G++G  +   L+  GH V  L R  SD      E A   V+ GD+ D   L
Sbjct: 1   MKVFVTGATGFIGSAVVRELVAAGHEVVGLAR--SDAGAAKLEAAGAQVHRGDLEDLDIL 58

Query: 60  VDACFGCHVIFHTAALVEPWLPDPSRFFA---VNVEGLKNVVQAAKETKTVEKIIYTSSF 116
             A      + H A        D   F     V+   ++ + +A + T   + +IYTS  
Sbjct: 59  RKAAAEADAVIHLAFT-----HDFDNFAQACEVDRRAIEALGEALRGTG--KPLIYTSGI 111

Query: 117 FALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPI-VPVYPGVIYGPG 175
           + LG T G   DE     E         ++AV++  AL+ A  G+   V   P V++G G
Sbjct: 112 WLLGPTGGQEEDE-----EAPDDPPTPAARAVSEAAALELAERGVRASVVRLPPVVHGRG 166

Query: 176 KLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTG 235
                  V  L+       +  Y+G G +R+   H DD    +  A+EKG++G  Y    
Sbjct: 167 DHG---FVPMLIAIAREKGVSAYVGDGKNRWPAVHRDDAARLYRLALEKGKAGSVYHAVA 223

Query: 236 E 236
           E
Sbjct: 224 E 224

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 96.6 bits (241), Expect = 4e-23
 Identities = 70/257 (27%), Positives = 106/257 (41%), Gaps = 33/257 (12%)

Query: 4   LVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGLPSEGALEL---VYGDVTDYRS 58
           LV+G  G+LG  +   LL++G    VR    R S    L     L++   + GDVTD + 
Sbjct: 1   LVTGGGGFLGRHIVRLLLREGELQEVRVFDLRFSP-ELLEDFSKLQVITYIEGDVTDKQD 59

Query: 59  LVDACFGCHVIFHTAALVEPW-LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
           L  A  G  V+ HTAA+++ +          VNV+G +NV+ A  +   V  ++YTSS  
Sbjct: 60  LRRALQGSDVVIHTAAIIDVFGKAYRDTIMKVNVKGTQNVLDACVKAG-VRVLVYTSSME 118

Query: 118 ALGSTDG----YIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPI--------VP 165
            +G           DE   +E       Y  SKA+A+K+ L   + G  +          
Sbjct: 119 VVGPNSYGQPIVNGDETTPYEST-HQDPYPESKALAEKLVL--KANGSTLKNGGRLYTCA 175

Query: 166 VYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG 225
           + P  I+G G       + +L+    NG      G  N      +V +V   HI A    
Sbjct: 176 LRPAGIFGEGDPFLFPFLVRLLK---NGLAKFRTGDKNVLSDRVYVGNVAWAHILAA--- 229

Query: 226 RSGERYLLTGENASFMQ 242
               R L   + AS + 
Sbjct: 230 ----RALQDPKKASSIA 242

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family

 Score = 96.2 bits (240), Expect = 6e-23
 Identities = 66/186 (35%), Positives = 96/186 (51%), Gaps = 22/186 (11%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-------DISGLPSEGALELVYGDVTD 55
           +LV+GA G++G  L  AL++QG+ VRA V   S       D S    +  +E+V GD+ D
Sbjct: 1   VLVTGADGFIGSHLVEALVRQGYEVRAFVLYNSFNSWGWLDTSPPEVKDKIEVVTGDIRD 60

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLP----DPSRFFAVNVEGLKNVVQAAKETKTVEKII 111
             S+  A  GC V+FH AAL+   +P     P  +   NV G  NV+QAA++   VEK++
Sbjct: 61  PDSVRKAMKGCDVVFHLAALIA--IPYSYIAPDSYVDTNVTGTLNVLQAARDLG-VEKVV 117

Query: 112 YTSSFFALGSTDGYIADENQVHEEKYFCTQ--YERSKAVADKIALQ-AASEGLPIVPVYP 168
           +TS+    G T  Y+     + E+     Q  Y  SK  AD++AL    S   P+  + P
Sbjct: 118 HTSTSEVYG-TAQYVP----IDEKHPLQGQSPYSASKIGADQLALSFYRSFNTPVTIIRP 172

Query: 169 GVIYGP 174
              YGP
Sbjct: 173 FNTYGP 178

This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 94.7 bits (236), Expect = 2e-22
 Identities = 66/284 (23%), Positives = 119/284 (41%), Gaps = 41/284 (14%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI--------SGLPSEGALELVYGDVT 54
           + V+G +G+LG  L   LL+ G  V  LVR  S          +GL ++  + ++ GD+T
Sbjct: 1   VFVTGGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEADR-VRVLEGDLT 59

Query: 55  ---------DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK 105
                      R L         + H AA  +   P     +  N++G ++V++ A    
Sbjct: 60  QPNLGLSAAASRELAG---KVDHVIHCAASYDFQAP-NEDAWRTNIDGTEHVLELAARLD 115

Query: 106 TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVP 165
             ++  Y S+ +  G+ +G I  E +++  + F   YE+SKA A+++   AA++ +P+  
Sbjct: 116 I-QRFHYVSTAYVAGNREGNI-RETELNPGQNFKNPYEQSKAEAEQLVRAAATQ-IPLTV 172

Query: 166 VYPGVIYGPGKLTTGN---------LVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVD 216
             P ++ G  K  TG          L+  L        +PG  G    R +   VD V D
Sbjct: 173 YRPSIVVGDSK--TGRIEKIDGLYELLNLLAKLGRWLPMPGNKGA---RLNLVPVDYVAD 227

Query: 217 GHIAAMEKGRS-GERYLLT-GENASFMQIFDMAAVITGTSRPRF 258
             +   +K  + G+ + LT     +  +I D+      +     
Sbjct: 228 AIVYLSKKPEANGQIFHLTDPTPQTLREIADLFKSAFLSPGLLV 271

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|215100 PLN00198, PLN00198, anthocyanidin reductase; Provisional

 Score = 92.3 bits (229), Expect = 3e-21
 Identities = 76/275 (27%), Positives = 119/275 (43%), Gaps = 43/275 (15%)

Query: 5   VSGASGYLGGRLCHALLKQGHSVRALVR------RTSDISGLPSEGALELVYGDVTDYRS 58
           V G +G+L   L   LL++G++V   VR      + + +  L   G L++   D+TD  S
Sbjct: 14  VIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEES 73

Query: 59  LVDACFGCHVIFHTAALVEPWLPDPSR-FFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
                 GC ++FH A  V     DP        ++G+ NV++A  + K+V+++I TSS  
Sbjct: 74  FEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAA 133

Query: 118 ALG----STDGYIADENQ------VHEEKYFCTQYERSKAVADKIALQAASEG-LPIVPV 166
           A+     S  G + +E        +  EK     Y  SK +A+K A + A E  + ++ V
Sbjct: 134 AVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITV 193

Query: 167 YPGVIYGPG-------------KLTTGNLVAKLMIERFNG--RLPGYIGYGNDRFSFCHV 211
            P ++ GP               L TGN   + +I    G   L G I       S  HV
Sbjct: 194 IPTLMAGPSLTSDIPSSLSLAMSLITGN---EFLINGLKGMQMLSGSI-------SITHV 243

Query: 212 DDVVDGHIAAMEKGRSGERYLLTGENASFMQIFDM 246
           +DV   HI   EK  +  RY+    N S  ++   
Sbjct: 244 EDVCRAHIFLAEKESASGRYICCAANTSVPELAKF 278

Length = 338

>gnl|CDD|178195 PLN02583, PLN02583, cinnamoyl-CoA reductase

 Score = 90.9 bits (226), Expect = 6e-21
 Identities = 71/244 (29%), Positives = 111/244 (45%), Gaps = 27/244 (11%)

Query: 5   VSGASGYLGGRLCHALLKQGHSVRALVRRTSD------ISGLP-SEGALELVYGDVTDYR 57
           V  ASGY+G  L   LL +G++V A V++  +      I GL   E  L++   D  DY 
Sbjct: 11  VMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYH 70

Query: 58  SLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
           S++DA  GC  +F        +     +   V V    NV++A  +T T+EK+++TSS  
Sbjct: 71  SILDALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLT 130

Query: 118 ALGSTDGYIADENQVHEEKY----FCTQYERSKAVADKIALQAA-----SEGLPIVPVYP 168
           A+   D  I+ +  V E  +    FC +++   A+A  ++ + A       G+ +V +  
Sbjct: 131 AVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMDRGVNMVSINA 190

Query: 169 GVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSG 228
           G++ GP  LT  N   K   +           Y N       V+ +VD HI A E   S 
Sbjct: 191 GLLMGPS-LTQHNPYLKGAAQM----------YENGVLVTVDVNFLVDAHIRAFEDVSSY 239

Query: 229 ERYL 232
            RYL
Sbjct: 240 GRYL 243

Length = 297

>gnl|CDD|178268 PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase family protein

 Score = 89.4 bits (222), Expect = 3e-20
 Identities = 71/249 (28%), Positives = 118/249 (47%), Gaps = 23/249 (9%)

Query: 5   VSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGA---LELVYGDVTDYR 57
           V+GASGY+   L   LL++G++V+A VR  +D       L  +GA   L L   ++ +  
Sbjct: 9   VTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEG 68

Query: 58  SLVDACFGCHVIFHTAALVEPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
           S      GC  +FHTA+     + DP +      V+G  NV+++  +  +V++++ TSS 
Sbjct: 69  SFDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSM 128

Query: 117 FALG-----STDGYIADENQVHEEKYFCTQ----YERSKAVADKIALQAASE-GLPIVPV 166
            A+       T   + DE     +  FC +    Y  SK +A++ A + A E G+ +V +
Sbjct: 129 AAVAYNGKPLTPDVVVDETW-FSDPAFCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTI 187

Query: 167 YPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR 226
            P ++ GP    T N  A+ ++   NG       + N  + +  V DV + HI A E   
Sbjct: 188 NPAMVIGPLLQPTLNTSAEAILNLINGAQ----TFPNASYRWVDVRDVANAHIQAFEIPS 243

Query: 227 SGERYLLTG 235
           +  RY L  
Sbjct: 244 ASGRYCLVE 252

Length = 322

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 85.9 bits (213), Expect = 3e-20
 Identities = 61/171 (35%), Positives = 79/171 (46%), Gaps = 17/171 (9%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           IL+ GA+G++G  L   LL+QGH V  LVR T  +S    E    +V GD+ D  SL DA
Sbjct: 1   ILILGATGFIGRALARELLEQGHEVTLLVRNTKRLSKEDQEPVA-VVEGDLRDLDSLSDA 59

Query: 63  CFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST 122
             G  V+ H A        D   F  V+VEG +NV++AAKE   V+  I+ SS  A G  
Sbjct: 60  VQGVDVVIHLAG----APRDTRDFCEVDVEGTRNVLEAAKEA-GVKHFIFISSLGAYGDL 114

Query: 123 DGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYG 173
                            + Y   KA  + +        LP   V PGVIYG
Sbjct: 115 HEETEPSPS--------SPYLAVKAKTEAV---LREASLPYTIVRPGVIYG 154

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|178256 PLN02650, PLN02650, dihydroflavonol-4-reductase

 Score = 86.4 bits (214), Expect = 4e-19
 Identities = 80/282 (28%), Positives = 138/282 (48%), Gaps = 44/282 (15%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVR------RTSDISGLP-SEGALELVYGDVTD 55
           + V+GASG++G  L   LL++G++VRA VR      +   +  LP +   L L   D+  
Sbjct: 8   VCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAV 67

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
             S  DA  GC  +FH A  ++    DP +      V G+ ++++A  + KTV +I++TS
Sbjct: 68  EGSFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTS 127

Query: 115 SFFALGSTDGYIADENQ--VHEEKY-----FCTQ-------YERSKAVADKIALQAASE- 159
           S    G+ +    +E+Q  V++E       FC +       Y  SK +A+K A + A+E 
Sbjct: 128 S---AGTVN---VEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAEN 181

Query: 160 GLPIVPVYPGVIYGPGKLTTG---NLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVD 216
           GL  + + P ++ GP  ++T    +L+  L +   N      I  G     F H+DD+ +
Sbjct: 182 GLDFISIIPTLVVGP-FISTSMPPSLITALSLITGNEAHYSIIKQGQ----FVHLDDLCN 236

Query: 217 GHIAAMEKGRSGERYLLTGENASFMQIFDMAAVITGTSRPRF 258
            HI   E   +  RY+ +  +A+   I D+A ++    R ++
Sbjct: 237 AHIFLFEHPAAEGRYICSSHDAT---IHDLAKML----REKY 271

Length = 351

>gnl|CDD|178569 PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase family protein

 Score = 82.0 bits (202), Expect = 1e-17
 Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 24/260 (9%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGA---LELVYGDVTD 55
           + V+GASGY+   +   LL +G+++ A VR   D       L  +GA   L+L   D+ D
Sbjct: 8   VCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLD 67

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVN--VEGLKNVVQAAKETKTVEKIIYT 113
             S   A  GC  +FHTA+ V   +    +   +N  V G  NV++   +  +V+++I T
Sbjct: 68  EGSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILT 127

Query: 114 SSFFALGSTDGYIADENQVHEEKYFCTQ---------YERSKAVADKIALQAASEG-LPI 163
           SS  A+ + +  +   N V +E +F            Y  SK +A+  A + A +  + +
Sbjct: 128 SSMAAVLAPETKLG-PNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDNEIDL 186

Query: 164 VPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAME 223
           + + PG++ GP    T N    +++E   G+ P    +      F  V DV   H+ A+E
Sbjct: 187 IVLNPGLVTGPILQPTLNFSVAVIVELMKGKNP----FNTTHHRFVDVRDVALAHVKALE 242

Query: 224 KGRSGERYLLTGENASFMQI 243
              +  RY++ G   +   I
Sbjct: 243 TPSANGRYIIDGPVVTIKDI 262

Length = 325

>gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs

 Score = 81.5 bits (202), Expect = 1e-17
 Identities = 86/355 (24%), Positives = 133/355 (37%), Gaps = 78/355 (21%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRAL----VRRTSDISGLPSEGALELVYGDVTD- 55
            +IL++G +G+LG  LC  LL+ GH V  +      R  +I  L      E +  DVT+ 
Sbjct: 1   KRILITGGAGFLGSHLCDRLLEDGHEVICVDNFFTGRKRNIEHLIGHPNFEFIRHDVTEP 60

Query: 56  YRSLVDACFGCHVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYT 113
               VD       I+H A    P  +  +P +    NV G  N++  AK      +++  
Sbjct: 61  LYLEVD------QIYHLACPASPVHYQYNPIKTLKTNVLGTLNMLGLAKRVGA--RVLLA 112

Query: 114 SSFFALGSTDGYIADENQVH--EEKYF----------CTQYERSKAVADKIALQAA---S 158
           S+    G          +VH   E Y+          C  Y+  K VA+   L  A    
Sbjct: 113 STSEVYGDP--------EVHPQPESYWGNVNPIGPRSC--YDEGKRVAE--TLCMAYHRQ 160

Query: 159 EGLPIVPVYPGVIYGPG-KLTTGNLVAKLMIERFNGR-LPGYIGYGNDRFSFCHVDDVVD 216
            G+ +        YGP      G +V+  +++   G  +  Y G G    SF +V D+V+
Sbjct: 161 HGVDVRIARIFNTYGPRMHPNDGRVVSNFIVQALRGEPITVY-GDGTQTRSFQYVSDLVE 219

Query: 217 GHIAAMEKGRSGERYLLTGENASFMQIFDMAAVI---TGTSRPRFCIPLWLIEAYGWILV 273
           G I  M     G    L G    F  I ++A ++   TG+                    
Sbjct: 220 GLIRLMNSDYFGGPVNL-GNPEEFT-ILELAELVKKLTGSK------------------- 258

Query: 274 FFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLR 327
             S I         P       +      KAK  LG+ P+  L+EGL+  + + R
Sbjct: 259 --SEIVFLPLPEDDP------KRRRPDISKAKELLGWEPKVPLEEGLRRTIEYFR 305

UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 81.3 bits (201), Expect = 1e-17
 Identities = 71/332 (21%), Positives = 117/332 (35%), Gaps = 40/332 (12%)

Query: 3   ILVSGASGYLGGRLCHALLK--QGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRS-L 59
           ILV+GA+G LG  L   L    +   V  L RR        S   +E V  D+ D  +  
Sbjct: 1   ILVTGAAGGLGRLLARRLAASPRVIGVDGLDRRRPP----GSPPKVEYVRLDIRDPAAAD 56

Query: 60  VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
           V        + H A +++P   D +    +NV+G +NV+ A      V +++ TSS    
Sbjct: 57  VFREREADAVVHLAFILDP-PRDGAERHRINVDGTQNVLDACAAAG-VPRVVVTSSVAVY 114

Query: 120 GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA-------ASEGLPIVPVYPGVIY 172
           G       D      E              DK  ++            L +  + P  I 
Sbjct: 115 G----AHPDNPAPLTEDAPLRGSPEFAYSRDKAEVEQLLAEFRRRHPELNVTVLRPATIL 170

Query: 173 GPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYL 232
           GPG             +  + R     G  +  F F H DDV    + A+  G +G  + 
Sbjct: 171 GPG-------TRNTTRDFLSPRRLPVPGGFDPPFQFLHEDDVARALVLAVRAGATGI-FN 222

Query: 233 LTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHV 292
           + G+    + +  + A++     P   +P  L  A              L  +    +  
Sbjct: 223 VAGDGP--VPLSLVLALLGRRPVP---LPSPLPAALAAARRL------GLRPLPPEQLDF 271

Query: 293 LAHQWAYSCVKAKTELGYNP-RSLKEGLQEVL 323
           L +       +A+ ELG+ P  +  E L++  
Sbjct: 272 LQYPPVMDTTRARVELGWQPKHTSAEVLRDFR 303

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 80.3 bits (199), Expect = 2e-17
 Identities = 61/252 (24%), Positives = 100/252 (39%), Gaps = 47/252 (18%)

Query: 5   VSGASGYLGGRLCHALLKQGHSVR--ALVRRTSDISGL-----------PSEGALEL--- 48
           ++GA+G+LG  L   LL+    V+   LVR     S L             +    L   
Sbjct: 1   LTGATGFLGKVLLEKLLRSTPEVKIYCLVRAKDGESALERLRQELLKYGLFDRLKALERI 60

Query: 49  --VYGDVT---------DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNV 97
             V GD++         D++ L +      VI H AA V  ++   S   A NV G + V
Sbjct: 61  IPVAGDLSEPNLGLSDEDFQELAE---EVDVIIHNAATVN-FVEPYSDLRATNVLGTREV 116

Query: 98  VQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEE------KYFCTQYERSKAVADK 151
           ++ AK+ K +    + S+ +  G   G + ++    +E            Y +SK +A++
Sbjct: 117 LRLAKQMKKL-PFHHVSTAYVNGERGGLLEEKPYKLDEDEPALLGGLPNGYTQSKWLAEQ 175

Query: 152 IALQAASEGLPIVPVYPGVIYG---PG---KLTTGNLVAKLMIERFNGRLPGYIGYGNDR 205
           + ++ A+ GLP+V   P +I G    G       G            G LP  +G  + R
Sbjct: 176 L-VREAAGGLPVVIYRPSIITGESRTGWINGDDFGPRGLLGGAGL--GVLPDILGDPDAR 232

Query: 206 FSFCHVDDVVDG 217
                VD V + 
Sbjct: 233 LDLVPVDYVANA 244

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1

 Score = 80.0 bits (198), Expect = 4e-17
 Identities = 51/207 (24%), Positives = 86/207 (41%), Gaps = 43/207 (20%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVR--ALVRRTSD-------ISGLPSEGA------- 45
            +L++GA+G+LG  L   LLK+ +  +   LVR   +       I  L   G        
Sbjct: 1   TVLLTGATGFLGAYLLRELLKRKNVSKIYCLVRAKDEEAALERLIDNLKEYGLNLWDELE 60

Query: 46  ---LELVYGDVT---------DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEG 93
              +++V GD++         DY+ L +      VI H  A V  W+         NV G
Sbjct: 61  LSRIKVVVGDLSKPNLGLSDDDYQELAEEV---DVIIHNGANVN-WVYPYEELKPANVLG 116

Query: 94  LKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ-------YERSK 146
            K +++ A   K  + + + S+     + +    +     E              Y +SK
Sbjct: 117 TKELLKLAATGKL-KPLHFVSTLSVFSAEE---YNALDDEESDDMLESQNGLPNGYIQSK 172

Query: 147 AVADKIALQAASEGLPIVPVYPGVIYG 173
            VA+K+  +AA+ GLP+  + PG I+G
Sbjct: 173 WVAEKLLREAANRGLPVAIIRPGNIFG 199

This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290

>gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain

 Score = 80.5 bits (199), Expect = 5e-17
 Identities = 51/201 (25%), Positives = 81/201 (40%), Gaps = 34/201 (16%)

Query: 2   KILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSD-------ISGLPSEG-------- 44
            +L++GA+G+LG  L   LL++     V  LVR  S+          L S          
Sbjct: 1   TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWHEDLAR 60

Query: 45  -ALELVYGDVT---------DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGL 94
             +E+V GD++         ++  L +       I H  ALV  W+   S     NV G 
Sbjct: 61  ERIEVVAGDLSEPRLGLSDAEWERLAENV---DTIVHNGALVN-WVYPYSELRGANVLGT 116

Query: 95  KNVVQAAKETKTVEKIIYTSSFFAL--GSTDGYIADENQVHEEKYFCTQYERSKAVADKI 152
           + V++ A   +  + + Y S+              D+  V         Y +SK VA+ +
Sbjct: 117 REVLRLAASGRA-KPLHYVSTISVGAAIDLSTVTEDDATVTPPPGLAGGYAQSKWVAELL 175

Query: 153 ALQAASEGLPIVPVYPGVIYG 173
             +A+  GLP+  V PG I G
Sbjct: 176 VREASDRGLPVTIVRPGRILG 196

This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367

>gnl|CDD|178484 PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase

 Score = 80.3 bits (198), Expect = 7e-17
 Identities = 68/271 (25%), Positives = 130/271 (47%), Gaps = 34/271 (12%)

Query: 5   VSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGA--LELVYGDVTDYRSLV 60
           V+GA+GY+G  L   LL++G++V A +R  +    L S  +    L L   D+ +  S  
Sbjct: 15  VTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFD 74

Query: 61  DACFGCHVIFHTAALVEPWLPD---------PSRFFAVNVEGLKNVVQAAKETKTVEKII 111
           +A  GC  +FH AA +E  +            S+     ++G  NV+++  ++KTV++++
Sbjct: 75  EAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVV 134

Query: 112 YTSSFFALGSTDG-----YIADEN-QVHEEKYFCTQ-----YERSKAVADKIALQAASE- 159
           +TSS   L + D       + DE  Q   +  + T+     Y  SK + ++ A + A E 
Sbjct: 135 FTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN 194

Query: 160 GLPIVPVYPGVIYGPGKLTTGNLVA--KLMIERFNG--RLPGYIGYGNDRF---SFCHVD 212
           G+ +V V    + GP    T ++ +  ++++    G  +L   +   N R    +  H++
Sbjct: 195 GIDLVSVITTTVAGP--FLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMGSIALVHIE 252

Query: 213 DVVDGHIAAMEKGRSGERYLLTGENASFMQI 243
           D+ D HI  ME+ ++  RY+   ++    ++
Sbjct: 253 DICDAHIFLMEQTKAEGRYICCVDSYDMSEL 283

Length = 353

>gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 79.7 bits (197), Expect = 1e-16
 Identities = 53/206 (25%), Positives = 79/206 (38%), Gaps = 38/206 (18%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLP---------------SEG 44
             +L++GA+G+LG  L   LL +    V  LVR  SD + L                S  
Sbjct: 1   RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSAD 60

Query: 45  ALELVYGDVT---------DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLK 95
            +E+V GD+           ++ L +      +I H AALV   +   S     NV G  
Sbjct: 61  RVEVVAGDLAEPDLGLSERTWQELAENV---DLIIHNAALVN-HVFPYSELRGANVLGTA 116

Query: 96  NVVQAAKETKTVEKIIYTSSFFALGSTDGY-------IADENQVHEEKYFCTQYERSKAV 148
            V++ A   K  + + Y SS     +                +   +      Y RSK V
Sbjct: 117 EVLRLAATGK-PKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQGLA-GGYGRSKWV 174

Query: 149 ADKIALQAASEGLPIVPVYPGVIYGP 174
           A+K+  +A   GLP+    PG I G 
Sbjct: 175 AEKLVREAGDRGLPVTIFRPGYITGD 200

Length = 382

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score = 77.3 bits (191), Expect = 5e-16
 Identities = 84/366 (22%), Positives = 135/366 (36%), Gaps = 69/366 (18%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRA---LVRRTSDISG-----LPSEGALELVYGD 52
           M++L++G +G++G  L    LKQG  V     L+RR S  +         +G +  V+GD
Sbjct: 1   MRVLITGGAGFIGSNLARFFLKQGWEVIGFDNLMRRGSFGNLAWLKANREDGGVRFVHGD 60

Query: 53  VTDYRSLVDACFGCHVIFHTAALVEP---W-LPDPSRFFAVNVEGLKNVVQAAKETKTVE 108
           + +   L D      +I HTAA  +P        P   F  N  G  NV++AA++     
Sbjct: 61  IRNRNDLEDLFEDIDLIIHTAA--QPSVTTSASSPRLDFETNALGTLNVLEAARQHAPNA 118

Query: 109 KIIYTSS---FFALGSTDGYIADENQVH---EEKY------------FCTQYERSKAVAD 150
             I+TS+   +  L +       E +     E                 + Y  SK  AD
Sbjct: 119 PFIFTSTNKVYGDLPNYLPLEELETRYELAPEGWSPAGISESFPLDFSHSLYGASKGAAD 178

Query: 151 KIALQ-AASEGLPIVPVYPGVIYGPGKLTTGN--LVAKLMIERFNGRLPGYIGYGNDRF- 206
           +   +     GL  V    G + GP +  T +   VA  +     G+     GYG  +  
Sbjct: 179 QYVQEYGRIFGLKTVVFRCGCLTGPRQFGTEDQGWVAYFLKCAVTGKPLTIFGYGGKQVR 238

Query: 207 SFCHVDDVVDGHIAAMEK--GRSGERYLLTG--ENASFMQIFDMAAVITGTSRPRFCIPL 262
              H  D+V+ ++   +    R GE + + G  EN+                       +
Sbjct: 239 DVLHSADLVNLYLRQFQNPDRRKGEVFNIGGGRENS-----------------------V 275

Query: 263 WLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCV-KAKTELGYNP-RSLKEGLQ 320
            L+E           ITG+               W  S + K K + G+ P R  +E L 
Sbjct: 276 SLLELIALC----EEITGRKMESYKDENRPGDQIWYISDIRKIKEKPGWKPERDPREILA 331

Query: 321 EVLPWL 326
           E+  W+
Sbjct: 332 EIYAWI 337

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|177862 PLN02214, PLN02214, cinnamoyl-CoA reductase

 Score = 77.5 bits (190), Expect = 5e-16
 Identities = 75/246 (30%), Positives = 111/246 (45%), Gaps = 23/246 (9%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL---PSEGALE---LVYGDVTDY 56
           + V+GA GY+   +   LL++G++V+  VR   D         EG  E   L   D+ DY
Sbjct: 13  VCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDY 72

Query: 57  RSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
            +L  A  GC  +FHTA+   P   DP +     V G K V+ AA E K V++++ TSS 
Sbjct: 73  EALKAAIDGCDGVFHTAS---PVTDDPEQMVEPAVNGAKFVINAAAEAK-VKRVVITSSI 128

Query: 117 FALGSTDGYIADENQVHEEKY----FCTQ----YERSKAVADKIALQAASE-GLPIVPVY 167
            A+   D     E  V E  +    FC      Y   K VA++ A + A E G+ +V + 
Sbjct: 129 GAV-YMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLN 187

Query: 168 PGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRS 227
           P ++ GP    T N     +++   G       Y N   ++  V DV   H+   E   +
Sbjct: 188 PVLVLGPPLQPTINASLYHVLKYLTGSAK---TYANLTQAYVDVRDVALAHVLVYEAPSA 244

Query: 228 GERYLL 233
             RYLL
Sbjct: 245 SGRYLL 250

Length = 342

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 76.2 bits (188), Expect = 8e-16
 Identities = 75/297 (25%), Positives = 125/297 (42%), Gaps = 37/297 (12%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           +LV+GA+GY+GGRL   LL++GH VRALVR    ++  P    + +V GD+ D  SL  A
Sbjct: 1   VLVTGATGYVGGRLVPRLLQEGHQVRALVRSPEKLADRPWSERVTVVRGDLEDPESLRAA 60

Query: 63  CFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST 122
             G    ++   LV         F   +    +N  +AA+    V++IIY       G  
Sbjct: 61  LEGIDTAYY---LVHSMGSGGD-FEEADRRAARNFARAARAAG-VKRIIYLGGLIPKG-- 113

Query: 123 DGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNL 182
                +E   H          RS+A   +I L+A   G+P+  +   VI G G       
Sbjct: 114 -----EELSPH---------LRSRAEVGEI-LRAG--GVPVTELRAAVIIGSGSA----- 151

Query: 183 VAKLMIERFNGRLPGYI--GYGNDRFSFCHVDDVVDGHIAAMEKGRSGER-YLLTGENA- 238
            +  M+     RLP  I   + N       + DV++  +AA+++  +    + + G +  
Sbjct: 152 -SFEMVRYLVERLPVMITPRWVNTPCQPIAIRDVLEYLVAALDRPATAGETFEIGGPDVL 210

Query: 239 SFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAH 295
           S+  + +  A + G  R    +P+         +     +T     I+ P +  L H
Sbjct: 211 SYKDMMERFAEVRGLRRWILPVPVLTPRLSSLWVGL---VTPVPNSIARPLIEGLKH 264

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs

 Score = 76.8 bits (189), Expect = 8e-16
 Identities = 84/349 (24%), Positives = 140/349 (40%), Gaps = 50/349 (14%)

Query: 4   LVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----SEGALEL------VYGDV 53
           LV+G  G+LG  +   LL++   ++ +  R  D +  P         +       + GD+
Sbjct: 3   LVTGGGGFLGQHIIRLLLERKEELKEI--RVLDKAFGPELIEHFEKSQGKTYVTDIEGDI 60

Query: 54  TDYRSLVDACFGCHVIFHTAALVEP-WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY 112
            D   L  AC G  V+ HTAA+V+    P+      VNV G + V++A  +   V++++Y
Sbjct: 61  KDLSFLFRACQGVSVVIHTAAIVDVFGPPNYEELEEVNVNGTQAVLEACVQN-NVKRLVY 119

Query: 113 TSSFFALG-STDGYIADENQVHEEKYFCTQ---YERSKAVADKIALQA----ASEGLPIV 164
           TSS    G +  G     N V +  Y  T    Y  SK +A+ I L A      +G  +V
Sbjct: 120 TSSIEVAGPNFKGRPI-FNGVEDTPYEDTSTPPYASSKLLAENIVLNANGAPLKQGGYLV 178

Query: 165 --PVYPGVIYGPGKLTTGNLVAKLMIERFNG----RLPGYIGYGNDRFSFCHVDDVVDGH 218
              + P  IYG G      +   L+    NG    R+ G            +V +V   H
Sbjct: 179 TCALRPMYIYGEGSHFLTEIFDFLL--TNNGWLFPRIKGSGVNP-----LVYVGNVAWAH 231

Query: 219 IAAM------EKGRSGERYLL---TGENASFMQIFDMAAVI-TGTSRPRFCIPLWLIEAY 268
           I A       +K   G+ Y +   T  N+     +++   +        + +PL+L+   
Sbjct: 232 ILAAKALQVPDKAIRGQFYFISDDTPHNSYSDFNYELLKELGLRLKTSWWYVPLFLLYFL 291

Query: 269 GWILVFFSR----ITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPR 313
            ++L   S          P  +   V +    + +S +KA+   GY P 
Sbjct: 292 AFLLEIVSFLLRPYVKYRPRYNRHAVALTNSMFTFSYLKAQRHFGYMPL 340

This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354

>gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 76.4 bits (189), Expect = 9e-16
 Identities = 92/367 (25%), Positives = 140/367 (38%), Gaps = 94/367 (25%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALV----------RRTSDISGLPSEGALELVY 50
           MKILV+G +G++G      LL +    + +               D+S  P       V 
Sbjct: 1   MKILVTGGAGFIGSNFVRYLLNKYPDYKIINLDKLTYAGNLENLEDVSSSPR---YRFVK 57

Query: 51  GDVTDYRSLVDACFG---CHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETK 105
           GD+ D   LVD  F       + H AA   V+  + DP  F   NV G   +++AA++  
Sbjct: 58  GDICDAE-LVDRLFEEEKIDAVIHFAAESHVDRSISDPEPFIRTNVLGTYTLLEAARKYG 116

Query: 106 TVEKIIYTSSFFALGSTD---GYIADENQVHEEKYFC--TQYERSKAVADKIALQAA-SE 159
            V++ ++ S       TD   G + D+ +  E       + Y  SKA AD +      + 
Sbjct: 117 -VKRFVHIS-------TDEVYGDLLDDGEFTETSPLAPTSPYSASKAAADLLVRAYHRTY 168

Query: 160 GLPIVPVYPGVIYGPG----KLTTGNLVAKLMIERF------NGRLPGYIGYGNDRFSFC 209
           GLP+V       YGP     KL          I  F         LP Y G G +   + 
Sbjct: 169 GLPVVITRCSNNYGPYQFPEKL----------IPLFILNALDGKPLPIY-GDGLNVRDWL 217

Query: 210 HVDDVVDGHIAAMEKGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYG 269
           +V+D        +EKGR GE Y + G N   +   ++  +I                   
Sbjct: 218 YVEDHARAIELVLEKGRVGEIYNIGGGNE--LTNLELVKLI------------------- 256

Query: 270 WILVFFSRITGKL-PLISY----PTVHVLAHQWAYS--CVKAKTELGYNPR-SLKEGLQE 321
                   + GK   LI+Y    P      H   Y+    K + ELG+ P+ S +EGL++
Sbjct: 257 ------LELLGKDESLITYVKDRPG-----HDRRYAIDSSKIRRELGWRPKVSFEEGLRK 305

Query: 322 VLPWLRS 328
            + W   
Sbjct: 306 TVRWYLE 312

This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315

>gnl|CDD|215370 PLN02686, PLN02686, cinnamoyl-CoA reductase

 Score = 76.7 bits (189), Expect = 1e-15
 Identities = 66/263 (25%), Positives = 106/263 (40%), Gaps = 51/263 (19%)

Query: 5   VSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----------PSEGALELVYGDVT 54
           V+G   +LG  +   LL+ G+SVR  V    D   L           S   +  V  ++T
Sbjct: 58  VTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLT 117

Query: 55  DYRSLVDACFGCHVIFHTAALVEP-WLPDPSRFFA-VNVEGLKNVVQAAKETKTVEKIIY 112
           +  SL +A  GC  +FHT+A V+P  L   ++  A +  +  +NV++A   T++V K ++
Sbjct: 118 EPESLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVF 177

Query: 113 TSSFFALGSTDGY------IADENQVHEEKYFCTQ----YERSKAVADKIALQAASE-GL 161
           TSS  A      Y      + DE    +E  FC      Y   K  A+K A +AA   GL
Sbjct: 178 TSSLLACVWRQNYPHDLPPVIDEESWSDES-FCRDNKLWYALGKLKAEKAAWRAARGKGL 236

Query: 162 PIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLP---------GYIGYGNDRFSFCHVD 212
            +  + P ++ GPG               F  R                 +   +   V+
Sbjct: 237 KLATICPALVTGPG---------------FFRRNSTATIAYLKGAQEMLADGLLATADVE 281

Query: 213 DVVDGHIA---AMEKGRSGERYL 232
            + + H+    AM    +  RY+
Sbjct: 282 RLAEAHVCVYEAMGNKTAFGRYI 304

Length = 367

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 76.2 bits (188), Expect = 1e-15
 Identities = 65/282 (23%), Positives = 109/282 (38%), Gaps = 31/282 (10%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
              V GASG +G  +   L ++G  VR + R  S ++ LP    +E+V  D  D  S++ 
Sbjct: 1   TAHVLGASGPIGREVARELRRRGWDVRLVSRSGSKLAWLPG---VEIVAADAMDASSVIA 57

Query: 62  ACFGCHVIFHTAALVEP-WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
           A  G  VI+H A      W      F  +    ++NVV AA+      K++   + +  G
Sbjct: 58  AARGADVIYHCANPAYTRW---EELFPPL----MENVVAAAEA--NGAKLVLPGNVYMYG 108

Query: 121 STDGYIADE---NQVHEEKYFCTQYERSKAVADKIALQAASEG-LPIVPVYPGVIYGPGK 176
              G    E    Q    K       R +A  ++  L A ++G +  + V     YGPG 
Sbjct: 109 PQAGSPITEDTPFQPTTRK------GRIRAEMEERLLAAHAKGDIRALIVRAPDFYGPGA 162

Query: 177 LTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIA-AMEKGRSGERYLLTG 235
               + +   +     G+   + G  +    + ++ DV    +  A E    GE + L G
Sbjct: 163 --INSWLGAALFAILQGKTAVFPGNLDTPHEWTYLPDVARALVTLAEEPDAFGEAWHLPG 220

Query: 236 -ENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFS 276
               +  ++  +AA   G       IP W +     +   F 
Sbjct: 221 AGAITTRELIAIAARAAGRPPKVRVIPKWTL----RLAGLFD 258

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

 Score = 75.3 bits (186), Expect = 2e-15
 Identities = 71/283 (25%), Positives = 122/283 (43%), Gaps = 42/283 (14%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISGLPSEGALELVYGDVTDYRSL 59
           MK+LV+G +GY+G      LLK GH V  L          L      +   GD+ D R+L
Sbjct: 1   MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQF-KFYEGDLLD-RAL 58

Query: 60  VDACFGCH---VIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
           + A F  +    + H AA   V   + +P +++  NV G  N+++A  +T  V+K I++S
Sbjct: 59  LTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTG-VKKFIFSS 117

Query: 115 SFFALGSTDGYIADENQVHEEKYFCTQ--YERSKAVADKIALQ--AASEGLPIV------ 164
           +     +  G     + + E         Y RSK ++++I L+  A +    +V      
Sbjct: 118 T----AAVYG-EPTTSPISETSPLAPINPYGRSKLMSEEI-LRDAAKANPFKVVILRYFN 171

Query: 165 PV--YPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGND---------RFSFCHVDD 213
                P    G        L+  +  E   G+      +G+D         R  + HVDD
Sbjct: 172 VAGACPDGTLGQRYPGATLLI-PVAAEAALGKRDKLFIFGDDYDTKDGTCIR-DYIHVDD 229

Query: 214 VVDGHIAAME---KGRSGERYLL-TGENASFMQIFDMAAVITG 252
           + D H+ A++   +G S   + L +G   S +++ + A  +TG
Sbjct: 230 LADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTG 272

Length = 329

>gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE

 Score = 74.3 bits (183), Expect = 5e-15
 Identities = 70/289 (24%), Positives = 117/289 (40%), Gaps = 41/289 (14%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISGLPSE---GALELVYGDVTDYR 57
           KILV+G +GY+G      LL+ GH V  L          LP       +  V GD+ D R
Sbjct: 1   KILVTGGAGYIGSHTVRQLLESGHEVVILDNLSNGSREALPRGERITPVTFVEGDLRD-R 59

Query: 58  SLVDACFGCH---VIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY 112
            L+D  F  H    + H A L  V   +  P +++  NV G  N+++A ++   V+K I+
Sbjct: 60  ELLDRLFEEHKIDAVIHFAGLIAVGESVQKPLKYYRNNVVGTLNLLEAMQQAG-VKKFIF 118

Query: 113 TSSFFALGSTDGYIADENQVHEEKYFCTQ--YERSKAVADKI--ALQAASEGLPIVPV-- 166
           +SS    G           + E+        Y RSK ++++I   LQ A      V +  
Sbjct: 119 SSSAAVYGEP-----SSIPISEDSPLGPINPYGRSKLMSEQILRDLQKADPDWSYVILRY 173

Query: 167 ------YPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFS--------FCHVD 212
                 +P    G       +L+     +   G+      +G D  +        + HV 
Sbjct: 174 FNVAGAHPSGDIGEDPPGITHLI-PYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVM 232

Query: 213 DVVDGHIAAMEK-GRSGERYLL---TGENASFMQIFDMAAVITGTSRPR 257
           D+ D H+AA+E     G  ++     G+  S +++ +    ++G   P 
Sbjct: 233 DLADAHLAALEYLLNGGGSHVYNLGYGQGFSVLEVIEAFKKVSGKDFPV 281

Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 72.6 bits (178), Expect = 1e-14
 Identities = 69/264 (26%), Positives = 103/264 (39%), Gaps = 39/264 (14%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKILV+GA+G++GG +   LL +GH VRA VR     + L   G +E+V GD+ D +SLV
Sbjct: 1   MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAAL--AGGVEVVLGDLRDPKSLV 58

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
               G   +   + L++        F AV V  +    +AA     V+  +  S   A  
Sbjct: 59  AGAKGVDGVLLISGLLDG----SDAFRAVQVTAVVRAAEAAGA--GVKHGVSLSVLGADA 112

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTG 180
           ++   +A                R+KA  +     +   G+P   +     Y       G
Sbjct: 113 ASPSALA----------------RAKAAVEAALRSS---GIPYTTLRRAAFYLGA----G 149

Query: 181 NLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAA-MEKGRSGERYLLTG-ENA 238
               +         +P  IG    R S   VDDV +   AA      +G  Y L G E  
Sbjct: 150 AAFIEAAEAAGLPVIPRGIG----RLSPIAVDDVAEALAAALDAPATAGRTYELAGPEAL 205

Query: 239 SFMQIFDMAAVITGTSRPRFCIPL 262
           +  ++        G  RP   IP 
Sbjct: 206 TLAELASGLDYTIG--RPVGLIPE 227

Length = 275

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 71.9 bits (177), Expect = 2e-14
 Identities = 61/252 (24%), Positives = 101/252 (40%), Gaps = 47/252 (18%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           ILV+GA+G LG  +   LL +  SV ALVR         ++G  E+  GD  D  +L  A
Sbjct: 1   ILVTGATGKLGTAVVELLLAKVASVVALVRNPEKAKAFAADGV-EVRQGDYDDPETLERA 59

Query: 63  CFGCHVIF--HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
             G   +     + L +             ++  KN + AAK+   V+ I+Y S+  A  
Sbjct: 60  FEGVDRLLLISPSDLEDR------------IQQHKNFIDAAKQ-AGVKHIVYLSASGA-- 104

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTG 180
                  +++     +             +K      + G+P   + PG  +        
Sbjct: 105 ------DEDSPFLLARDH--------GATEKY---LEASGIPYTILRPG-WF------MD 140

Query: 181 NLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAM-EKGRSGERYLLTGENAS 239
           NL+  L      G + G  G G  + +F    D+ +   AA+ E G  G+ Y LTG  A 
Sbjct: 141 NLLEFLPSILEEGTIYGPAGDG--KVAFVDRRDIAEAAAAALTEPGHEGKVYNLTGPEAL 198

Query: 240 FMQIFDMAAVIT 251
                ++AA+++
Sbjct: 199 SYA--ELAAILS 208

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 71.2 bits (175), Expect = 2e-14
 Identities = 63/267 (23%), Positives = 97/267 (36%), Gaps = 45/267 (16%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKIL+ G + ++G  L   LL  GH V    R  +       EG   +V GD  D  +L 
Sbjct: 1   MKILIIGGTRFIGKALVEELLAAGHDVTVFNRGRTKPD--LPEGVEHIV-GDRNDRDALE 57

Query: 61  DACFG------CHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
           +   G         I +T   VE  L      F                   V++ I+ S
Sbjct: 58  ELLGGEDFDVVVDTIAYTPRQVERAL----DAFK----------------GRVKQYIFIS 97

Query: 115 SFFALGSTDGYIADENQVHEEKYFCT----QYERSKAVADKIALQAASEGLPIVPVYPGV 170
           S          I +   + E           Y R K  A+ + ++AA    P   V P  
Sbjct: 98  SASVYLKPGRVITESTPLREPDAVGLSDPWDYGRGKRAAEDVLIEAA--AFPYTIVRPPY 155

Query: 171 IYGPGKLTTGNLVAKL--MIERFNGRLPGYI-GYGNDRFSFCHVDDVVDGHIAAMEKGR- 226
           IYGP     G+   +L    +R     P  + G G+    F HV D+    + A    + 
Sbjct: 156 IYGP-----GDYTGRLAYFFDRLARGRPILVPGDGHSLVQFIHVKDLARALLGAAGNPKA 210

Query: 227 SGERYLLTGENA-SFMQIFDMAAVITG 252
            G  + +TG+ A ++ ++ +  A   G
Sbjct: 211 IGGIFNITGDEAVTWDELLEACAKALG 237

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs

 Score = 71.9 bits (177), Expect = 3e-14
 Identities = 64/271 (23%), Positives = 105/271 (38%), Gaps = 39/271 (14%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS------GLPSEGALELVYGDVTD 55
           + L++G +G  G  L   LL++G+ V  +VRR+S  +         ++  + L YGD+TD
Sbjct: 1   RALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTDRIDHLYINKDRITLHYGDLTD 60

Query: 56  YRSL------VDACFGCHVIFHTAA--LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV 107
             SL      V        I+H AA   V+    DP     VN  G  N+++A +     
Sbjct: 61  SSSLRRAIEKVRP----DEIYHLAAQSHVKVSFDDPEYTAEVNAVGTLNLLEAIRILGLD 116

Query: 108 EKIIYTSSFFALGSTDGY-IADENQVHEEKYFCTQYERSKAVADKIALQ-AASEGLPIVP 165
            +    SS    G       ++           + Y  SK  AD I      + GL  V 
Sbjct: 117 ARFYQASSSEEYGKVQELPQSETTPFRPR----SPYAVSKLYADWITRNYREAYGLFAVN 172

Query: 166 VYPGVIYGPG--------KLTTGNLVAKLMIERFNGRLPG-YIGYGNDRFSFCHVDDVVD 216
                  GP         K+T    VA   I+   G  P   +G  + +  +    D V+
Sbjct: 173 GRLFNHEGPRRGETFVTRKITRQ--VA--RIKA--GLQPVLKLGNLDAKRDWGDARDYVE 226

Query: 217 GHIAAMEKGRSGERYLLTGENASFMQIFDMA 247
            +   +++G   +  + TGE  S  +  ++A
Sbjct: 227 AYWLLLQQGEPDDYVIATGETHSVREFVELA 257

GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

 Score = 71.8 bits (177), Expect = 4e-14
 Identities = 71/294 (24%), Positives = 124/294 (42%), Gaps = 63/294 (21%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSV----------RALVRRTSDISGLPSEGALELVYG 51
           K+LV+G +GY+G      LL+ G+ V          R  + R   I        +E   G
Sbjct: 1   KVLVTGGAGYIGSHTVVELLEAGYDVVVLDNLSNGHREALPRIEKIR-------IEFYEG 53

Query: 52  DVTDYRSLVDACFGCH---VIFHTAAL------VEPWLPDPSRFFAVNVEGLKNVVQAAK 102
           D+ D R+ +D  F  H    + H AAL      V+     P +++  NV G  N+++A +
Sbjct: 54  DIRD-RAALDKVFAEHKIDAVIHFAALKAVGESVQ----KPLKYYDNNVVGTLNLLEAMR 108

Query: 103 ETKTVEKIIYTSSFFALGSTD-GYIADENQVHEEKYFCTQ-YERSKAVADKIAL-QAASE 159
               V+  +++SS    G  +   I +E  ++      T  Y R+K + ++I    A + 
Sbjct: 109 AHG-VKNFVFSSSAAVYGEPETVPITEEAPLN-----PTNPYGRTKLMVEQILRDLAKAP 162

Query: 160 GLPIV------PV--YPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGND------- 204
           GL  V      P   +P  + G       NL+   +++   GR      +G+D       
Sbjct: 163 GLNYVILRYFNPAGAHPSGLIGEDPQIPNNLI-PYVLQVALGRREKLAIFGDDYPTPDGT 221

Query: 205 --RFSFCHVDDVVDGHIAAMEKGRSGERYLL----TGENASFMQIFDMAAVITG 252
             R  + HV D+ D H+ A+EK  +G    +    TG   S +++ +    ++G
Sbjct: 222 CVR-DYIHVVDLADAHVLALEKLENGGGSEIYNLGTGRGYSVLEVVEAFEKVSG 274

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323

>gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs

 Score = 68.9 bits (169), Expect = 3e-13
 Identities = 50/207 (24%), Positives = 83/207 (40%), Gaps = 25/207 (12%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVR-ALVRRTSDISGLPSEGALELVYGDVTDYRSL 59
           MK+L++GASG++G RL   LL    + R  L+   S  +  PS               +L
Sbjct: 1   MKVLITGASGFVGQRLAERLLSDVPNERLILIDVVSPKA--PSGAPRVTQIAGDLAVPAL 58

Query: 60  VDACF--GCHVIFHTAALVEPW-LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
           ++A       V+FH AA+V      D    + VNV+G +N+++A ++     + ++TSS 
Sbjct: 59  IEALANGRPDVVFHLAAIVSGGAEADFDLGYRVNVDGTRNLLEALRKNGPKPRFVFTSSL 118

Query: 117 --FALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS-----EGLPIVPVYPG 169
             + L   +                + Y   KA+ + + L   S     +G  +    P 
Sbjct: 119 AVYGLPLPNPVTDHTALDPA-----SSYGAQKAMCE-LLLNDYSRRGFVDGRTLRL--PT 170

Query: 170 VIYGPGKLTTGNLVAKLMIERFNGRLP 196
           V   PG+    N  A         R P
Sbjct: 171 VCVRPGR---PN-KAASAFASTIIREP 193

Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 65.4 bits (160), Expect = 9e-13
 Identities = 47/202 (23%), Positives = 74/202 (36%), Gaps = 39/202 (19%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           I V GA+G  G RL   LL +GH V AL R  S          +  V  D+ D   L +A
Sbjct: 1   IAVIGATGKTGRRLVKELLARGHQVTALSRNPSKA----PAPGVTPVQKDLFDLADLAEA 56

Query: 63  CFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST 122
             G   +            D         +G+K+++ AA     V +I+  S+       
Sbjct: 57  LAGVDAVVDAFG---ARPDDS--------DGVKHLLDAAARAG-VRRIVVVSAAGLYRDE 104

Query: 123 DGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIY----GPGKLT 178
            G    ++           Y R+KA A++  L+A   GL    V PG ++       ++ 
Sbjct: 105 PGTFRLDD-----APLFPPYARAKAAAEE-LLRA--SGLDWTIVRPGALFDEEGETYEIG 156

Query: 179 TGN-----------LVAKLMIE 189
           T              VA  +++
Sbjct: 157 TEGDPAGESSISRADVAAALLD 178

Length = 182

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score = 66.6 bits (163), Expect = 2e-12
 Identities = 59/234 (25%), Positives = 93/234 (39%), Gaps = 23/234 (9%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRAL----VRRTSDISGLPSEGALELVYGDVTDYRS 58
           ILV+G +G++G  L   LL++G+ V  +      R  +I       A   V  D+ D   
Sbjct: 2   ILVTGGAGFIGSHLVDRLLEEGNEVVVVDNLSSGRRENIEPEFENKAFRFVKRDLLDTAD 61

Query: 59  LVDACFGCHVIFHTAALVEPWL--PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
            V A      +FH AA  +  L   DP      NV    NV++A +    V++I++ SS 
Sbjct: 62  KV-AKKDGDTVFHLAANPDVRLGATDPDIDLEENVLATYNVLEAMRANG-VKRIVFASSS 119

Query: 117 FALGSTDGYIADENQVHEEKYFCTQ---YERSKAVADKIALQAASEGLPI---VPVYPGV 170
              G        E+      Y       Y  SK  A +  + A +        +  +  +
Sbjct: 120 TVYGEAKVIPTPED------YPPLPISVYGASKL-AAEALISAYAHLFGFQAWIFRFANI 172

Query: 171 IYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEK 224
           + GP   T G +   +   + N      +G G  R S+ +V D VD  + A EK
Sbjct: 173 V-GPR-STHGVIYDFINKLKRNPNELEVLGDGRQRKSYLYVSDCVDAMLLAWEK 224

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs

 Score = 63.8 bits (156), Expect = 1e-11
 Identities = 48/186 (25%), Positives = 76/186 (40%), Gaps = 36/186 (19%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           KIL++GA+G LG  L   L ++G+ V    R  + +  L           D+TD  ++ +
Sbjct: 1   KILITGATGMLGRALVRLLKERGYEVIGTGRSRASLFKL-----------DLTDPDAVEE 49

Query: 62  ACFGC--HVIFHTAALVEP----WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
           A       VI + AA           DP   + VNV   +N+ +AAKE     ++I+ S+
Sbjct: 50  AIRDYKPDVIINCAAYTRVDKCES--DPELAYRVNVLAPENLARAAKEVGA--RLIHIST 105

Query: 116 --FFALGSTDGYIADE--NQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVI 171
              F  G    Y  ++  N           Y +SK + +   L A    L I+      +
Sbjct: 106 DYVFD-GKKGPYKEEDAPN-------PLNVYGKSKLLGEVAVLNANPRYL-ILRT--SWL 154

Query: 172 YGPGKL 177
           YG  K 
Sbjct: 155 YGELKN 160

dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280

>gnl|CDD|191263 pfam05368, NmrA, NmrA-like family

 Score = 63.1 bits (154), Expect = 1e-11
 Identities = 46/117 (39%), Positives = 61/117 (52%), Gaps = 15/117 (12%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDIS-GLPSEGALELVYGDVTDYRSLV 60
           ILV GA+GY GG +  A LK GH VRALVR   S+++  L + G  ELV GD+ D+ SLV
Sbjct: 1   ILVFGATGYQGGSVVRASLKAGHPVRALVRDPKSELAKSLKAAGV-ELVEGDLDDHESLV 59

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
           +A  G  V+F               + +  +E  K +  AAKE   V+  I  S F 
Sbjct: 60  EALKGVDVVFSVTGF----------WLSKEIEDGKKLADAAKEAG-VKHFIP-SEFG 104

NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232

>gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs

 Score = 63.9 bits (156), Expect = 2e-11
 Identities = 80/360 (22%), Positives = 143/360 (39%), Gaps = 61/360 (16%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRAL--------VRRTSD-ISGLPSEGALELVYG 51
           MKILV+GA+G++G  +   LL++G  V  +        VR     +  L   G  + V G
Sbjct: 1   MKILVTGAAGFIGFHVAKRLLERGDEVVGIDNLNDYYDVRLKEARLELLGKSGGFKFVKG 60

Query: 52  DVTDYRSLVDACFGCH---VIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKT 106
           D+ D R  +   F  H    + H AA   V   L +P  +   N+ G  N+++  +    
Sbjct: 61  DLED-REALRRLFKDHEFDAVIHLAAQAGVRYSLENPHAYVDSNIVGFLNLLELCRHFG- 118

Query: 107 VEKIIY--TSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIA-LQAASEGLPI 163
           V+ ++Y  +SS +   +T    +++++V       + Y  +K   + +A   +   G+P 
Sbjct: 119 VKHLVYASSSSVYG-LNTKMPFSEDDRVDHP---ISLYAATKKANELMAHTYSHLYGIPT 174

Query: 164 VPVYPGVIYGP-GK------LTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVD 216
             +    +YGP G+      L T  ++    I+ FN         GN    F ++DD+V+
Sbjct: 175 TGLRFFTVYGPWGRPDMALFLFTKAILEGKPIDVFN--------DGNMSRDFTYIDDIVE 226

Query: 217 GHIAAMEKGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLW----LIEAYGWIL 272
           G + A++                            G + P   + L      +E      
Sbjct: 227 GVVRALDTPAKPNPNWDAEAPDPSTSSAPYRVYNIGNNSP---VKLMDFIEALEKA---- 279

Query: 273 VFFSRITGKLPLISYPTVH---VLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRS 328
                  GK    +Y  +    V    +A    K +  LGY P+ SL+EG++  + W + 
Sbjct: 280 ------LGKKAKKNYLPMQKGDVPE-TYA-DISKLQRLLGYKPKTSLEEGVKRFVEWYKE 331

This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 62.7 bits (153), Expect = 2e-11
 Identities = 60/258 (23%), Positives = 92/258 (35%), Gaps = 43/258 (16%)

Query: 3   ILVSGASGYLGGRLCHALLK-QGHSVRALVRRT-SDISGLPSEGALELVYGDVTDYRSLV 60
           ILV GA+G  GG +  ALLK  G  VRAL R   S  +   +   +E+V GD+ D  SL 
Sbjct: 1   ILVFGATGKQGGSVVRALLKDPGFKVRALTRDPSSPAAKALAAPGVEVVQGDLDDPESLE 60

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
            A  G + +F      E    D        +   KNVV AAK    V+  +++S    + 
Sbjct: 61  AALKGVYGVFLVTDFWEAGGED-------EIAQGKNVVDAAKRAG-VQHFVFSS----VP 108

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTG 180
             +          + K    +Y R             + GLP   + P            
Sbjct: 109 DVEKLTLAVPH-FDSKAEVEEYIR-------------ASGLPATILRPAFFM-------E 147

Query: 181 NLVAKLMIE-RFNGRLPGYIGYGNDR-FSFCHVDDVVDGHIAAME----KGRSGERYLLT 234
           N +     +   +G L   +    D       V D+  G   A         +G+   L 
Sbjct: 148 NFLTPPAPQKMEDGTLTLVLPLDPDTKLPMIDVADI--GPAVAAIFKDPAKFNGKTIELA 205

Query: 235 GENASFMQIFDMAAVITG 252
           G+  +  +I    + + G
Sbjct: 206 GDELTPEEIAAAFSKVLG 223

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

 Score = 62.3 bits (152), Expect = 4e-11
 Identities = 73/336 (21%), Positives = 123/336 (36%), Gaps = 72/336 (21%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKIL++GA+G LG  L    L     V A  R                   D+TD  +++
Sbjct: 1   MKILITGANGQLGTELR-RALPGEFEVIATDRAE----------------LDITDPDAVL 43

Query: 61  DACFGCH--VIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
           +        V+ + AA   V+    +P   FAVN  G +N+ +AA E     ++++ S+ 
Sbjct: 44  EVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGA--RLVHISTD 101

Query: 117 FAL-GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPG 175
           +   G   G   + +  +        Y RSK   +  A++AA     I+      +YG  
Sbjct: 102 YVFDGEKGGPYKETDTPNPLNV----YGRSKLAGE-EAVRAAGPRHLILRT--SWVYGEY 154

Query: 176 KLTTGNLVAKLMIERFNGRLPGYIGYGNDRF-SFCHVDDVVDGHIAAMEKGRSGERYLLT 234
                N V K M+          +   +D++ S  + +D+ D  +  +EK + G  Y L 
Sbjct: 155 ---GNNFV-KTMLRLAKEGKE--LKVVDDQYGSPTYTEDLADAILELLEKEKEGGVYHLV 208

Query: 235 GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLIS----YPTV 290
                    ++ A  I               E  G          G++        YPT 
Sbjct: 209 NSGECSW--YEFAKAI--------------FEEAGV--------DGEVIEPIASAEYPTP 244

Query: 291 HVLAHQWAYS---CVKAKTELGYNPRSLKEGLQEVL 323
              A + A S     K +   G +    +E L+ +L
Sbjct: 245 ---AKRPANSSLDTKKLEKAFGLSLPEWREALKALL 277

Length = 281

>gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs

 Score = 61.2 bits (149), Expect = 1e-10
 Identities = 48/216 (22%), Positives = 76/216 (35%), Gaps = 38/216 (17%)

Query: 2   KILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           KI ++GA+G LGG +  ALL   G +V  L R +S  S       +++V  D   + SLV
Sbjct: 1   KIAIAGATGTLGGPIVSALLASPGFTVTVLTRPSSTSSNEFQPSGVKVVPVDYASHESLV 60

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
            A  G   +                           ++ AA     V++ I   S F + 
Sbjct: 61  AALKGVDAVISALGGAAI-------------GDQLKLIDAAIAAG-VKRFI--PSEFGVD 104

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVI--YGPGKLT 178
                      + +EK         + V     L+A + GLP   V  G+   Y    L 
Sbjct: 105 YDRIGALPLLDLFDEK---------RDVRR--YLRAKNAGLPWTYVSTGMFLDYLLEPLF 153

Query: 179 TGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV 214
               +A               G G  +F+F  ++D+
Sbjct: 154 GVVDLANRTAT--------IYGDGETKFAFTTLEDI 181

PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score = 60.7 bits (148), Expect = 1e-10
 Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 42/231 (18%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           IL++G +G++G  L   L K+GH V  L R        P  GA     G         D+
Sbjct: 1   ILITGGTGFIGRALTQRLTKRGHEVTILTRS-------PPPGANTKWEGYKPWAGEDADS 53

Query: 63  CFGCHVIFHTAA---LVEPWLPD------PSRFFAVNVEGLKNVVQAAKETKTVEKIIYT 113
             G   + + A      + W  +       SR     ++  + +V+A    +   K+  +
Sbjct: 54  LEGADAVINLAGEPIADKRWTEERKQEIRDSR-----IDTTRLLVEAIAAAEQKPKVFIS 108

Query: 114 SSFFALG----STDGYIADENQVHEEKYF---CTQYERSKAVADKIALQAASEGLPIVPV 166
           +S  A+G    S D    +E+    + +    C  +E       + A  A   G  +V +
Sbjct: 109 AS--AVGYYGPSEDREYTEEDSPAGDDFLAELCRDWE-------EAAQAAEDLGTRVVLL 159

Query: 167 YPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDG 217
             G++ GP     G  +AK M+  F   L G +G G   FS+ H++D+V  
Sbjct: 160 RTGIVLGPK----GGALAK-MLLPFRLGLGGPLGSGRQWFSWIHIEDLVQL 205

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

>gnl|CDD|182639 PRK10675, PRK10675, UDP-galactose-4-epimerase; Provisional

 Score = 61.0 bits (148), Expect = 2e-10
 Identities = 68/262 (25%), Positives = 108/262 (41%), Gaps = 51/262 (19%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSV----------RALVRRTSDISGLPSEGALELVY 50
           M++LV+G SGY+G   C  LL+ GH V          R+++     + G         V 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGG----KHPTFVE 56

Query: 51  GDVTDYRSLVDACFGCHVI---FHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETK 105
           GD+ +  +L+      H I    H A L  V   +  P  ++  NV G   ++ A +   
Sbjct: 57  GDIRN-EALLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN 115

Query: 106 TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT-----QYERSKAVADKIA--LQAAS 158
            V+ +I++SS    G       D+ ++   + F T      Y +SK + ++I   LQ A 
Sbjct: 116 -VKNLIFSSSATVYG-------DQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQ 167

Query: 159 EGLPIV------PV--YPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFS--- 207
               I       PV  +P    G       N +   + +   GR      +GND  +   
Sbjct: 168 PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDG 227

Query: 208 -----FCHVDDVVDGHIAAMEK 224
                + HV D+ DGH+AAMEK
Sbjct: 228 TGVRDYIHVMDLADGHVAAMEK 249

Length = 338

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 60.0 bits (146), Expect = 2e-10
 Identities = 37/104 (35%), Positives = 51/104 (49%), Gaps = 8/104 (7%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           ILV+GA+G +G ++   LL+ G  VRALVR     + L + GA E+V GD+ D   L  A
Sbjct: 1   ILVTGATGRIGSKVATTLLEAGRPVRALVRSDERAAALAARGA-EVVVGDLDDPAVLAAA 59

Query: 63  CFGCHVIFHTA-----ALVEPWLPDPSRFFAVNVE--GLKNVVQ 99
             G   +F  A     A   P     +  FA  +   G+K VV 
Sbjct: 60  LAGVDAVFFLAPPAPTADARPGYVQAAEAFASALREAGVKRVVN 103

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4

 Score = 59.3 bits (144), Expect = 4e-10
 Identities = 56/235 (23%), Positives = 87/235 (37%), Gaps = 33/235 (14%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           +L+ G  GYLG RL   LL QG  V    R    ++     G   L   D+T    L D 
Sbjct: 1   VLILGC-GYLGQRLARQLLAQGWQVTGTTRSPEKLAADRPAGVTPLA-ADLTQPGLLADV 58

Query: 63  CFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST 122
               H++           P    +      GL+ ++ A  +   V+++IY SS    G  
Sbjct: 59  ---DHLVISLP-------PPAGSYRGGYDPGLRALLDALAQLPAVQRVIYLSSTGVYGDQ 108

Query: 123 DGYIADENQVHEEKYFCT-QYERSKAV--ADKIALQAASEGLPIVPVYPGVIYGPGKLTT 179
            G      +  +E        E  +A+  A++  L   S+   I  +    IYGPG    
Sbjct: 109 QG------EWVDETSPPNPSTESGRALLEAEQALLALGSKPTTI--LRLAGIYGPG---- 156

Query: 180 GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLT 234
                +  + R      G    GN   +  HVDD+V     A+++   G  Y + 
Sbjct: 157 -----RHPLRRLAQG-TGRPPAGNAPTNRIHVDDLVGALAFALQRPAPGPVYNVV 205

Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251

>gnl|CDD|235630 PRK05865, PRK05865, hypothetical protein; Provisional

 Score = 59.3 bits (143), Expect = 1e-09
 Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 12/115 (10%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           M+I V+GASG LG  L   LL QGH V  + R   D    PS  + + +  D+ D  ++ 
Sbjct: 1   MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPD--SWPS--SADFIAADIRDATAVE 56

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
            A  G  V+ H A     W+   +    +N++G  NV++A  ET T  +I++TSS
Sbjct: 57  SAMTGADVVAHCA-----WVRGRND--HINIDGTANVLKAMAETGT-GRIVFTSS 103

Length = 854

>gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein

 Score = 58.3 bits (142), Expect = 1e-09
 Identities = 48/186 (25%), Positives = 70/186 (37%), Gaps = 36/186 (19%)

Query: 3   ILVSGASGYLGGRLCHALLKQG--------HSVRALVRRTSDISGLPSEGALELVYGDVT 54
           +LV+G  G +G  LC  +LK               L     ++    ++  L    GDV 
Sbjct: 1   VLVTGGGGSIGSELCRQILKFNPKKIILFSRDEFKLYEIRQELRQEYNDPKLRFFIGDVR 60

Query: 55  DYRSLVDAC--FGCHVIFHTAA-----LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV 107
           D   L  A    G   +FH AA     LVE    +P      NV G +NV +AA E   V
Sbjct: 61  DRERLERAMEQHGVDTVFHAAALKHVPLVE---YNPMEAIKTNVLGTENVAEAAIENG-V 116

Query: 108 EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVY 167
           EK +  S+  A+  T+   A                 +K +A+K+   A  E       +
Sbjct: 117 EKFVLISTDKAVNPTNVMGA-----------------TKRLAEKLFQAANRESGSGKTRF 159

Query: 168 PGVIYG 173
             V +G
Sbjct: 160 SVVRFG 165

This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 57.3 bits (139), Expect = 2e-09
 Identities = 72/333 (21%), Positives = 128/333 (38%), Gaps = 41/333 (12%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           ++L+ G +G++G  L  ALL++G  VR   R           G ++ + GD  +   L  
Sbjct: 1   RVLIVGGNGFIGSHLVDALLEEGPQVRVFDRSIPPYE--LPLGGVDYIKGDYENRADLES 58

Query: 62  ACFGCHVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
           A  G   + H A+   P     +P      NV     +++A      + KII+ SS   +
Sbjct: 59  ALVGIDTVIHLASTTNPATSNKNPILDIQTNVAPTVQLLEACAAAG-IGKIIFASSGGTV 117

Query: 120 GSTDGYIA-DENQVHEEKYFCTQYERSKAVADK-IALQAASEGLPIVPVYPGVIYGPGKL 177
                 +   E+         + Y  SK   +K + L     GL    +     YGPG+ 
Sbjct: 118 YGVPEQLPISES--DPTLPISS-YGISKLAIEKYLRLYQYLYGLDYTVLRISNPYGPGQR 174

Query: 178 TTG--NLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERY-LLT 234
             G   ++   + +   G      G G     + ++DD+V+  +A +      E + + +
Sbjct: 175 PDGKQGVIPIALNKILRGEPIEIWGDGESIRDYIYIDDLVEALMALLRSKGLEEVFNIGS 234

Query: 235 GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLA 294
           G   S  ++      +TG S      P                 T  +P I      VL 
Sbjct: 235 GIGYSLAELIAEIEKVTGRSVQVIYTP---------------ARTTDVPKI------VLD 273

Query: 295 HQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWL 326
                   +A+ ELG++P+ SL++GL++   W+
Sbjct: 274 IS------RARAELGWSPKISLEDGLEKTWQWI 300

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 55.7 bits (135), Expect = 3e-09
 Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 18/123 (14%)

Query: 2   KILVSGASGYLGGRLCHALLKQ----GHSVRALVRRTSDISGLPSEGA-LELVYGDVTDY 56
           KI + GA+G  G     A++++    GH V ALVR   D + LP+E   L++V GDV D 
Sbjct: 1   KIAIIGATGRTG----SAIVREALARGHEVTALVR---DPAKLPAEHEKLKVVQGDVLDL 53

Query: 57  RSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
             + +A  G   +   +AL       P     ++ EG +N+V A K      ++I     
Sbjct: 54  EDVKEALEGQDAVI--SALGTRNDLSP---TTLHSEGTRNIVSAMKAAGVK-RLIVVGGA 107

Query: 117 FAL 119
            +L
Sbjct: 108 GSL 110

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8

 Score = 55.3 bits (134), Expect = 1e-08
 Identities = 65/291 (22%), Positives = 98/291 (33%), Gaps = 61/291 (20%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           KI+++G +G++G  L   L   GH V  L RR     GL              D  SL  
Sbjct: 1   KIVITGGTGFIGRALTRRLTAAGHEVVVLSRRPGKAEGLAEVITW--------DGLSLGP 52

Query: 62  ACF-GCHVIFHTAA---LVEPWLPD------PSRFFAVNVEGLKNVVQAAKETKTVEKII 111
               G   + + A        W          SR     +E  + +V+A        K+ 
Sbjct: 53  WELPGADAVINLAGEPIACRRWTEANKKEILSSR-----IESTRVLVEAIANAPAPPKV- 106

Query: 112 YTSSFFALGSTDGYIAD-ENQVHEEKY-----F----CTQYERSKAVADKIALQAASEGL 161
                    S  GY     ++V  E       F    C  +E       K A  A+  G 
Sbjct: 107 -----LISASAVGYYGHSGDEVLTENSPSGKDFLAEVCKAWE-------KAAQPASELGT 154

Query: 162 PIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAA 221
            +V +  GV+ GP     G L   L+  R    L G +G G    S+ H+DD+V     A
Sbjct: 155 RVVILRTGVVLGPDG---GALPKMLLPFRLG--LGGPLGSGRQWMSWIHIDDLVRLIEFA 209

Query: 222 MEKGRSGERYLLTG----ENASFMQIFDMAAVITGTSRPR-FCIPLWLIEA 267
           +E                 NA F +   +   +    RP    +P + ++ 
Sbjct: 210 IENPDLSGPVNAVAPNPVTNAEFTKA--LGRAL---HRPAGLPVPAFALKL 255

This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296

>gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs

 Score = 53.7 bits (129), Expect = 4e-08
 Identities = 43/119 (36%), Positives = 61/119 (51%), Gaps = 13/119 (10%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISGLPSEGALELVYGDVTDYRSL 59
           MK+L++G +G +G  L   LL++GH V  +    T     LP    L +V G + D ++L
Sbjct: 1   MKVLITGGAGQIGSHLIEHLLERGHQVVVIDNFATGRREHLPDHPNLTVVEGSIAD-KAL 59

Query: 60  VDACFGC----HVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY 112
           VD  FG      V+   AA  +P  W  D       NV G  NVVQAAK+   V+++IY
Sbjct: 60  VDKLFGDFKPDAVVHTAAAYKDPDDWYEDT----LTNVVGGANVVQAAKKA-GVKRLIY 113

Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307

>gnl|CDD|224013 COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

 Score = 53.0 bits (128), Expect = 7e-08
 Identities = 59/262 (22%), Positives = 101/262 (38%), Gaps = 40/262 (15%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALV--------RRTSDISGLPSEGALELVYGD 52
           MKILV+G +G++G      +L +      +            + ++ +        V GD
Sbjct: 1   MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLEN-LADVEDSPRYRFVQGD 59

Query: 53  VTDYRSLVDAC--FGCHVIFHTAA--LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVE 108
           + D   +      +    + H AA   V+  +  P+ F   NV G   +++AA++     
Sbjct: 60  ICDRELVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKF 119

Query: 109 KIIYTSS---FFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ-AASEGLPIV 164
           +  + S+   +  LG  D    +    +      + Y  SKA +D +      + GLP  
Sbjct: 120 RFHHISTDEVYGDLGLDDDAFTETTPYNPS----SPYSASKAASDLLVRAYVRTYGLPAT 175

Query: 165 PVYPGVIYGP----GKLTTGNLVAKLMIERFNG-RLPGYIGYGNDRFSFCHVDDVVDGHI 219
                  YGP     KL     +  ++I    G  LP Y G G     + +V+D    H 
Sbjct: 176 ITRCSNNYGPYQFPEKL-----IPLMIINALLGKPLPVY-GDGLQIRDWLYVED----HC 225

Query: 220 AA----MEKGRSGERYLLTGEN 237
            A    + KG+ GE Y + G N
Sbjct: 226 RAIDLVLTKGKIGETYNIGGGN 247

Length = 340

>gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs

 Score = 52.5 bits (126), Expect = 1e-07
 Identities = 74/351 (21%), Positives = 123/351 (35%), Gaps = 62/351 (17%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           + LV+GA G++G  L   L  +GH VR    ++ +    P++   E    D+ +  + + 
Sbjct: 2   RALVTGAGGFIGSHLAERLKAEGHYVRGADWKSPEHMTQPTD-DDEFHLVDLREMENCLK 60

Query: 62  ACFGCHVIFHTAALVEPWLPD----------PSRFFAVNVEGLKNVVQAAKETKTVEKII 111
           A  G   +FH AA       D           +     N     N+++AA+    VE+ +
Sbjct: 61  ATEGVDHVFHLAA-------DMGGMGYIQSNHAVIMYNNTLINFNMLEAARING-VERFL 112

Query: 112 YTSSFFALGSTDGYIADENQVHEEKYFCTQ----YERSKAVADKIALQAASE--GLPIVP 165
           + SS               ++ EE  +  +    Y   K   ++   Q  +E  G+    
Sbjct: 113 FASSACVYPEFKQLETTVVRLREEDAWPAEPQDAYGWEKLATER-LCQHYNEDYGIETRI 171

Query: 166 VYPGVIYGPGKLTTGN-------LVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGH 218
           V    IYGP     G        +  K+   +   R   + G G    SF ++DD V+G 
Sbjct: 172 VRFHNIYGPRGTWDGGREKAPAAMCRKVATAKDGDRFEIW-GDGLQTRSFTYIDDCVEGL 230

Query: 219 IAAMEKGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRI 278
              ME        L + E  S  ++ +M    +G        PL +I             
Sbjct: 231 RRLMESDFGEPVNLGSDEMVSMNELAEMVLSFSG-------KPLEIIH------------ 271

Query: 279 TGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRS 328
                    P                K ELG+ P   L+EGL+    W++ 
Sbjct: 272 -----HTPGPQG---VRGRNSDNTLLKEELGWEPNTPLEEGLRITYFWIKE 314

This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328

>gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 52.7 bits (127), Expect = 1e-07
 Identities = 44/186 (23%), Positives = 68/186 (36%), Gaps = 36/186 (19%)

Query: 3   ILVSGASGYLGGRLCHALLKQG--------HSVRALVRRTSDISGLPSEGALELVYGDVT 54
           +LV+G  G +G  LC  +LK               L     ++     E  L    GDV 
Sbjct: 253 VLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVR 312

Query: 55  DYRSLVDA--CFGCHVIFHTAA-----LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV 107
           D   +  A       ++FH AA     LVE    +P      NV G +NV +AA +   V
Sbjct: 313 DRDRVERAMEGHKVDIVFHAAALKHVPLVE---YNPEEAIKTNVLGTENVAEAAIKNG-V 368

Query: 108 EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVY 167
           +K +  S+  A+  T+   A                 +K +A+K+   A          +
Sbjct: 369 KKFVLISTDKAVNPTNVMGA-----------------TKRLAEKLFQAANRNVSGTGTRF 411

Query: 168 PGVIYG 173
             V +G
Sbjct: 412 CVVRFG 417

Length = 588

>gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs

 Score = 51.9 bits (125), Expect = 1e-07
 Identities = 43/134 (32%), Positives = 55/134 (41%), Gaps = 22/134 (16%)

Query: 3   ILVSGASGYLGGRLCHALLKQG--------HSVRALVRRTSDISGLPSEGALELVYGDVT 54
           ILV+G +G +G  L   +LK G             L     ++        L  + GDV 
Sbjct: 5   ILVTGGAGSIGSELVRQILKFGPKKLIVFDRDENKLHELVRELRSRFPHDKLRFIIGDVR 64

Query: 55  DYRSL--VDACFGCHVIFHTAAL--VEPWLPD-PSRFFAVNVEGLKNVVQAAKETKTVEK 109
           D   L       G  ++FH AAL  V P + D P      NV G KNV+ AA E   VEK
Sbjct: 65  DKERLRRAFKERGPDIVFHAAALKHV-PSMEDNPEEAIKTNVLGTKNVIDAAIENG-VEK 122

Query: 110 IIYTSSFFALGSTD 123
                 F  + STD
Sbjct: 123 ------FVCI-STD 129

UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287

>gnl|CDD|177093 CHL00194, ycf39, Ycf39; Provisional

 Score = 51.9 bits (125), Expect = 1e-07
 Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 5/116 (4%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           M +LV GA+G LG ++    L +G+ VR LVR     S L   GA ELVYGD++   +L 
Sbjct: 1   MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGA-ELVYGDLSLPETLP 59

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
            +  G   I   A+   P   D      ++ +G   +++AAK  K +++ I+ S  
Sbjct: 60  PSFKGVTAII-DASTSRP--SDLYNAKQIDWDGKLALIEAAKAAK-IKRFIFFSIL 111

Length = 317

>gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs

 Score = 51.5 bits (124), Expect = 2e-07
 Identities = 54/306 (17%), Positives = 101/306 (33%), Gaps = 107/306 (34%)

Query: 1   MKILVSGASGYLGGRLCHALLKQG---HSVRALVR---------------RTSDISGLPS 42
             +L++GA+G+LG  L   LL+       +  L+R               +        +
Sbjct: 1   KSVLITGATGFLGKVLLEKLLRSCPDIGKIYLLIRGKSGQSAEERLRELLKDKLFDRGRN 60

Query: 43  EGALEL-----VYGDVT---------DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFA 88
              L       + GD++         D ++L++     ++I H AA V         F  
Sbjct: 61  LNPLFESKIVPIEGDLSEPNLGLSDEDLQTLIEE---VNIIIHCAATV--------TFDE 109

Query: 89  -------VNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADE-----------N 130
                  +NV G   +++ AK  K ++  ++ S+ +   + D  + +E            
Sbjct: 110 RLDEALSINVLGTLRLLELAKRCKKLKAFVHVSTAYV--NGDRQLIEEKVYPPPADPEKL 167

Query: 131 QVHEEKY---------------FCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYG-- 173
               E                     Y  +KA+A+++ +      LP+V V P ++    
Sbjct: 168 IDILELMDDLELERATPKLLGGHPNTYTFTKALAERL-VLKERGNLPLVIVRPSIVGATL 226

Query: 174 ----PGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCH-----------VDDVVDGH 218
               PG            I+ FNG    ++ YG       +           VD V +  
Sbjct: 227 KEPFPGW-----------IDNFNGPDGLFLAYGKGILRTMNADPNAVADIIPVDVVANAL 275

Query: 219 IAAMEK 224
           +AA   
Sbjct: 276 LAAAAY 281

SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320

>gnl|CDD|187580 cd05272, TDH_SDR_e, L-threonine dehydrogenase, extended (e) SDRs

 Score = 51.2 bits (123), Expect = 3e-07
 Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 20/131 (15%)

Query: 2   KILVSGASGYLGGRLCHALLKQ-GH-SVRALVRRTSDISGLPSEGALE--LVYGDVTDYR 57
           +IL++G  G +G  L   L K+ G  +V A     SDI   P+   L     Y DV D++
Sbjct: 1   RILITGGLGQIGSELAKLLRKRYGKDNVIA-----SDIRKPPAHVVLSGPFEYLDVLDFK 55

Query: 58  SLVDAC--FGCHVIFHTAALV----EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKII 111
           SL +         I H AAL+    E    +P   + VN+ GL NV++ A+E     +I 
Sbjct: 56  SLEEIVVNHKITWIIHLAALLSAVGEK---NPPLAWDVNMNGLHNVLELAREHN--LRIF 110

Query: 112 YTSSFFALGST 122
             S+  A G T
Sbjct: 111 VPSTIGAFGPT 121

This subgroup contains members identified as L-threonine dehydrogenase (TDH). TDH catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. This group is distinct from TDHs that are members of the medium chain dehydrogenase/reductase family. This group has the NAD-binding motif and active site tetrad of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 308

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 50.6 bits (121), Expect = 3e-07
 Identities = 48/198 (24%), Positives = 71/198 (35%), Gaps = 41/198 (20%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS--------DISGLPSEGALELVYGD 52
              LV+GAS  +G  +  AL ++G  V    RR+                 G    V  D
Sbjct: 6   KVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAAD 65

Query: 53  VTDYRSLVDACF--------GCHVIFHTAALVEPWLP-------DPSRFFAVNVEGLKNV 97
           V+D    V+A             ++ + A +  P  P       D  R   VN+ G   +
Sbjct: 66  VSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLL 125

Query: 98  VQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIA 153
            +AA      ++I+  SS   LG   G  A              Y  SKA    +   +A
Sbjct: 126 TRAALPLMKKQRIVNISSVAGLGGPPGQAA--------------YAASKAALIGLTKALA 171

Query: 154 LQAASEGLPIVPVYPGVI 171
           L+ A  G+ +  V PG I
Sbjct: 172 LELAPRGIRVNAVAPGYI 189

Length = 251

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 49.2 bits (118), Expect = 9e-07
 Identities = 37/139 (26%), Positives = 56/139 (40%), Gaps = 20/139 (14%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGA--LELVYGDVTDYRSL- 59
           +L++G S  +G  L  AL  QG+ V A  R    +  L       LE++  DVTD  S+ 
Sbjct: 3   VLITGCSSGIGLALALALAAQGYRVIATARNPDKLESLGELLNDNLEVLELDVTDEESIK 62

Query: 60  -----VDACFGCH-VIFHTAALVEPW------LPDPSRFFAVNVEGLKNVVQAA----KE 103
                V   FG   V+ + A            + +    F VNV G   V +A     ++
Sbjct: 63  AAVKEVIERFGRIDVLVNNAGYGLFGPLEETSIEEVRELFEVNVFGPLRVTRAFLPLMRK 122

Query: 104 TKTVEKIIYTSSFFALGST 122
             +  +I+  SS   L  T
Sbjct: 123 QGS-GRIVNVSSVAGLVPT 140

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|225462 COG2910, COG2910, Putative NADH-flavin reductase [General function prediction only]

 Score = 48.5 bits (116), Expect = 1e-06
 Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 6/105 (5%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKI + GASG  G R+    LK+GH V A+VR  S ++       L+    D+ D  SL 
Sbjct: 1   MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGVTILQ---KDIFDLTSLA 57

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK 105
               G   +            D     + ++E L   ++ A   +
Sbjct: 58  SDLAGHDAVISA---FGAGASDNDELHSKSIEALIEALKGAGVPR 99

Length = 211

>gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain

 Score = 48.4 bits (116), Expect = 2e-06
 Identities = 77/339 (22%), Positives = 117/339 (34%), Gaps = 75/339 (22%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY---RSL 59
           ILV+GA+G LG  L   L ++G  V AL R                   D+TD     +L
Sbjct: 1   ILVTGANGQLGRELTRLLAERGVEVVALDRPE----------------LDLTDPEAVAAL 44

Query: 60  VDACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
           V       V+ + AA   V+    +P   +AVN  G  N+ +A         +I+ S+ +
Sbjct: 45  VRE-ARPDVVVNAAAYTAVDKAESEPELAYAVNALGPGNLAEACAARGA--PLIHISTDY 101

Query: 118 AL-GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGK 176
              G+  G   +++           Y R+K   ++ A+ AA+    I+      +YG   
Sbjct: 102 VFDGAKGGPYREDDPTGPLNV----YGRTKLAGEQ-AVLAANPRHLILRT--AWVYGEY- 153

Query: 177 LTTGNLVAKLMIERFNGRLPGYIGYGNDRFSF-CHVDDVVDGHIAAMEKGRSGER----Y 231
              GN   K M+     R    +   +D+        D+ D  +A + K   G      Y
Sbjct: 154 ---GNNFVKTMLRLAAERDE--LRVVDDQLGSPTSARDLADALLALIRKRLRGPALAGTY 208

Query: 232 LLTGENASFMQIFDMAAVI---TGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYP 288
            L G        +D A  I    G    R       +            I        YP
Sbjct: 209 HLAGSGE--TSWYDFARAIFDEAGADGGR-------VRP----------IPTA----EYP 245

Query: 289 TVHVLAHQWAYS---CVKAKTELGYNPRSLKEGLQEVLP 324
           T    A + A S     K +   G      +E L EVL 
Sbjct: 246 TP---ARRPANSVLDTSKLEATFGIPLPDWREALAEVLD 281

L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284

>gnl|CDD|130249 TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehydratase

 Score = 48.5 bits (116), Expect = 2e-06
 Identities = 79/347 (22%), Positives = 132/347 (38%), Gaps = 61/347 (17%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALV-------RRTSDISGLPSEGALELVYGDVT 54
           +ILV+G +G++G      +L +      +V           +++ L        V GD+ 
Sbjct: 1   RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIG 60

Query: 55  DYRSLVDACFGCH---VIFHTAA--LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEK 109
           D R LV   F  H    + H AA   V+  +  P+ F   NV G   +++A ++     +
Sbjct: 61  D-RELVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFR 119

Query: 110 IIYTSSFFALGSTD---GYIADENQVHEEKYFC--TQYERSKAVADKIALQ-AASEGLPI 163
             + S       TD   G +   +   E       + Y  SKA +D +      + GLP 
Sbjct: 120 FHHIS-------TDEVYGDLEKGDAFTETTPLAPSSPYSASKAASDHLVRAYHRTYGLPA 172

Query: 164 VPVYPGVIYGPGKLTTGNLVAKLMIERFNGR-LPGYIGYGNDRFSFCHVDDVVDGHIAAM 222
           +       YGP +     L+  ++     G+ LP Y G G     + +V+D        +
Sbjct: 173 LITRCSNNYGPYQFPE-KLIPLMITNALAGKPLPVY-GDGQQVRDWLYVEDHCRAIYLVL 230

Query: 223 EKGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKL 282
           EKGR GE Y + G N       ++   I                           + GK 
Sbjct: 231 EKGRVGETYNIGGGNE--RTNLEVVETIL-------------------------ELLGKD 263

Query: 283 P-LISYPTVHVLAHQWAYS--CVKAKTELGYNPR-SLKEGLQEVLPW 325
             LI++       H   Y+    K K ELG+ P+ + +EGL++ + W
Sbjct: 264 EDLITHVEDRP-GHDRRYAIDASKIKRELGWAPKYTFEEGLRKTVQW 309

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 317

>gnl|CDD|187562 cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 47.7 bits (114), Expect = 4e-06
 Identities = 81/361 (22%), Positives = 129/361 (35%), Gaps = 70/361 (19%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-------EGALELVYGDVT 54
           ++LV+G +G+ G  L   L + G  V        D    P+       +  +    GD+ 
Sbjct: 6   RVLVTGHTGFKGSWLSLWLQELGAKVIGYSL---DPPTNPNLFELANLDNKISSTRGDIR 62

Query: 55  DYRSLVDACFGCH--VIFHTAA--LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKI 110
           D  +L +A       ++FH AA  LV     DP   F  NV G  N+++A +ET +V+ +
Sbjct: 63  DLNALREAIREYEPEIVFHLAAQPLVRLSYKDPVETFETNVMGTVNLLEAIRETGSVKAV 122

Query: 111 IYTSSFFALGSTD---GYIADEN-QVHEEKYFCTQYERSKAVADKIAL----------QA 156
           +  +S     + +   GY  ++    H+       Y  SK  A+ I              
Sbjct: 123 VNVTSDKCYENKEWGWGYRENDPLGGHDP------YSSSKGCAELIISSYRNSFFNPENY 176

Query: 157 ASEGLPIVPVYPGVIYGPGKLTTGNLV-----AKLMIERFNGRLPGYIGYGNDRFSFCHV 211
              G+ I     G + G G      +V     A    ER   R P  I     R  + HV
Sbjct: 177 GKHGIAIASARAGNVIGGGDWAEDRIVPDCIRAFEAGERVIIRNPNAI-----R-PWQHV 230

Query: 212 DDVVDGHIAAMEKGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWI 271
            + + G++   EK            N      F        T                 +
Sbjct: 231 LEPLSGYLLLAEKLYERGEEYAEAWN------FGPDDEDAVTVL--------------EL 270

Query: 272 LVFFSRITGKLP---LISYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLR 327
           +   +R  G+     L      H  A+     C KAKT LG+ PR +L+E L+  + W +
Sbjct: 271 VEAMARYWGEDARWDLDGNSHPH-EANLLKLDCSKAKTMLGWRPRWNLEETLEFTVAWYK 329

Query: 328 S 328
            
Sbjct: 330 E 330

This subgroup contains CDP-D-glucose 4,6-dehydratase, an extended SDR, which catalyzes the conversion of CDP-D-glucose to CDP-4-keto-6-deoxy-D-glucose. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 336

>gnl|CDD|224015 COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 39/235 (16%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL--PSEGALELVYGDVTDYRSLV 60
           IL++G +G +G  L   L K GH V  L RR    S    P+    E     + D  +L 
Sbjct: 1   ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHPNVTLWE----GLADALTL- 55

Query: 61  DACFGCHVIFHTAA---LVEPWLPD-PSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
               G   + + A        W            +   + +V+    ++T  K++ ++S 
Sbjct: 56  ----GIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISAS- 110

Query: 117 FALG----STDGYIADENQVHEEKYF----CTQYERSKAVADKIALQAASEGLPIVPVYP 168
            A+G    S D  + +E+   ++  F    C  +E       + ALQA   G  +V +  
Sbjct: 111 -AVGYYGHSGDRVVTEESPPGDD--FLAQLCQDWE-------EEALQAQQLGTRVVLLRT 160

Query: 169 GVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAME 223
           GV+  P     G  + K M+  F   L G +G G   FS+ H++D+V+  +  +E
Sbjct: 161 GVVLSPD----GGALGK-MLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLE 210

Length = 297

>gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase

 Score = 45.1 bits (107), Expect = 3e-05
 Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 9/71 (12%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--------EGALELVYGDV 53
            +LV GA+GY+G  +   L+++G++V A+ R  S I G            GA E+V+GDV
Sbjct: 62  TVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGA-EVVFGDV 120

Query: 54  TDYRSLVDACF 64
           TD  SL    F
Sbjct: 121 TDADSLRKVLF 131

Length = 390

>gnl|CDD|187571 cd05261, CAPF_like_SDR_e, capsular polysaccharide assembling protein (CAPF) like, extended (e) SDRs

 Score = 44.3 bits (105), Expect = 3e-05
 Identities = 54/225 (24%), Positives = 79/225 (35%), Gaps = 42/225 (18%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKIL++GA G++G  L   L +Q         R SD S L                    
Sbjct: 1   MKILITGAKGFIGKNLIARLKEQKDDDIFFYDRESDESELD------------------- 41

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
           D   G   IFH A +  P   D + F + NV   + ++ A         I+ +SS  A  
Sbjct: 42  DFLQGADFIFHLAGVNRP--KDEAEFESGNVGLTERLLDALTRNGKKPPILLSSSIQAAL 99

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPI-VPVYPGVIYGPGKLT 178
                                Y +SK  A+++  + A E G P+ +   P V +G     
Sbjct: 100 D------------------NPYGKSKLAAEELLQEYARETGAPVYIYRLPNV-FGKWCRP 140

Query: 179 TGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAME 223
             N             LP  I       +  ++DDVVD  I  +E
Sbjct: 141 NYNSAVATFCYNIARDLPIQINDPAAELTLVYIDDVVDELIQLLE 185

This subgroup of extended SDRs, includes some members which have been identified as capsular polysaccharide assembling proteins, such as Staphylococcus aureus Cap5F which is involved in the biosynthesis of N-acetyl-l-fucosamine, a constituent of surface polysaccharide structures of S. aureus. This subgroup has the characteristic active site tetrad and NAD-binding motif of extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 248

>gnl|CDD|165812 PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase

 Score = 44.2 bits (104), Expect = 5e-05
 Identities = 82/337 (24%), Positives = 132/337 (39%), Gaps = 59/337 (17%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRAL----VRRTSDISGLPSEGALELVYGDVTDY 56
           ++I+V+G +G++G  L   L+ +G  V  +      R  ++  L      EL+  DV + 
Sbjct: 121 LRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEP 180

Query: 57  RSL-VDACFGCHVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYT 113
             L VD       I+H A    P  +  +P +    NV G  N++  AK      + + T
Sbjct: 181 ILLEVDQ------IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--RFLLT 232

Query: 114 SSFFALG------STDGYIADENQVHEEKYFCTQYERSKAVADKIAL---QAASEGLPIV 164
           S+    G        + Y  + N + E    C  Y+  K  A+ +A+   + A   + I 
Sbjct: 233 STSEVYGDPLEHPQKETYWGNVNPIGERS--C--YDEGKRTAETLAMDYHRGAGVEVRIA 288

Query: 165 PVYPGVIYGPGK-LTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAME 223
            ++    YGP   L  G +V+  + +    +     G G    SF +V D+VDG +A ME
Sbjct: 289 RIFN--TYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALME 346

Query: 224 KGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLP 283
               G   L  G    F  + ++A V+  T      I              F   T   P
Sbjct: 347 GEHVGPFNL--GNPGEFT-MLELAEVVKETIDSSATIE-------------FKPNTADDP 390

Query: 284 LISYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGL 319
               P +            KAK  L + P+ SL+EGL
Sbjct: 391 HKRKPDIS-----------KAKELLNWEPKISLREGL 416

Length = 436

>gnl|CDD|187559 cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannoheptose 6-epimerase (GME), extended (e) SDRs

 Score = 43.8 bits (104), Expect = 5e-05
 Identities = 72/359 (20%), Positives = 120/359 (33%), Gaps = 74/359 (20%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
            I+V+G +G++G  L  AL ++G +   +V   S+  G   +  + L   D  D     D
Sbjct: 1   MIIVTGGAGFIGSNLVKALNERGITDILVVDNLSN--GEKFKNLVGLKIADYIDKDDFKD 58

Query: 62  ACFGCH-------VIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
                         IFH  A  +    D       N +  K ++    E K   + IY S
Sbjct: 59  W-VRKGDENFKIEAIFHQGACSDTTETDGKYMMDNNYQYTKELLHYCLEKKI--RFIYAS 115

Query: 115 SFFALG-STDGYIADENQVHEE--------KYFCTQYERS--KAVADKIALQAASEGLPI 163
           S    G  + G+  D    +          K    Q+ R   K V  ++       GL  
Sbjct: 116 SAAVYGNGSLGFAEDIETPNLRPLNVYGYSKLLFDQWARRHGKEVLSQVV------GLRY 169

Query: 164 VPVYPGVIYGPG---KLTTGNLVAKL---MIERFNGRL-PGYIGYGNDRFS--FCHVDDV 214
             VY     GP    K    ++V  L   +      +L     GY +      F +V DV
Sbjct: 170 FNVY-----GPREYHKGRMASVVFHLFNQIKAGEKVKLFKSSDGYADGEQLRDFVYVKDV 224

Query: 215 VDGHIAAMEKGR-SGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILV 273
           V  ++  +E    SG   + TG   SF  +   +A      +                  
Sbjct: 225 VKVNLFFLENPSVSGIFNVGTGRARSFNDL--ASATFKALGKE----------------- 265

Query: 274 FFSRITGKLPLISYPTVHVLAHQWAYSCVKAKT--ELGYNPR--SLKEGLQEVLPWLRS 328
                  K+  I +P      +Q +++          GY     SL+EG+++ +    +
Sbjct: 266 ------VKIEYIDFPEDLRGKYQ-SFTEADISKLRAAGYTKEFHSLEEGVKDYVKNYLA 317

This subgroup contains ADP-L-glycero-D-mannoheptose 6-epimerase, an extended SDR, which catalyzes the NAD-dependent interconversion of ADP-D-glycero-D-mannoheptose and ADP-L-glycero-D-mannoheptose. This subgroup has the canonical active site tetrad and NAD(P)-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 317

>gnl|CDD|233954 TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydratase

 Score = 43.8 bits (104), Expect = 6e-05
 Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 14/121 (11%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-------EGALELVYGDVT 54
           K+LV+G +G+ G  L   LL+ G  V      + D    P+          +E  +GD+ 
Sbjct: 6   KVLVTGHTGFKGSWLSLWLLELGAEVYGY---SLDPPTSPNLFELLNLAKKIEDHFGDIR 62

Query: 55  DYRSLVDAC--FGCHVIFHTAA--LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKI 110
           D   L  A   F   ++FH AA  LV     DP   F  NV G  N+++A +   +V+ +
Sbjct: 63  DAAKLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAV 122

Query: 111 I 111
           +
Sbjct: 123 V 123

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 349

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 42.5 bits (101), Expect = 7e-05
 Identities = 31/134 (23%), Positives = 53/134 (39%), Gaps = 22/134 (16%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-------ISGLPSEGA-LELVYGDVT 54
           +L++G +G LG  L   L  +G     LV R          ++ L + GA + +   DV 
Sbjct: 3   VLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAACDVA 62

Query: 55  DYRSL------VDACFGC-HVIFHTAALVEPWLP---DPSRF---FAVNVEGLKNVVQAA 101
           D  +L      + A  G    + H A +++        P RF    A  V G  N+ +  
Sbjct: 63  DRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPERFERVLAPKVTGAWNLHELT 122

Query: 102 KETKTVEKIIYTSS 115
           ++   +   +  SS
Sbjct: 123 RDLD-LGAFVLFSS 135

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|132628 TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehydratase

 Score = 43.5 bits (103), Expect = 8e-05
 Identities = 39/161 (24%), Positives = 64/161 (39%), Gaps = 25/161 (15%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVR-----RTSDISGLPSEGALELVYGDVTDYR 57
           IL++G +G  G      LL+  +  + ++      +  ++        L    GDV D  
Sbjct: 7   ILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKE 66

Query: 58  SLVDACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
            L  A  G   + H AAL  V     +P      N+ G +NV+ AA +   V++++    
Sbjct: 67  RLTRALRGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAID-NGVKRVV---- 121

Query: 116 FFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA 156
             AL STD      N           Y  +K  +DK+ + A
Sbjct: 122 --AL-STDKAANPIN----------LYGATKLASDKLFVAA 149

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. Length = 324

>gnl|CDD|200381 TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase

 Score = 43.0 bits (101), Expect = 1e-04
 Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 10/107 (9%)

Query: 3   ILVSGASGYLGGRLCHALLKQG-HSVRALVR---RTSDISGLPSEGALELVYGDVTDYRS 58
           +L++G +G  G  +    L      +R   R   +  D+    +   L+   GDV DYRS
Sbjct: 7   LLITGGTGSFGNAVLRRFLDTDIKEIRIFSRDEKKQDDMRKKYNNSKLKFYIGDVRDYRS 66

Query: 59  LVDACFGCHVIFHTAALVEPWLPD----PSRFFAVNVEGLKNVVQAA 101
           +++A  G   I+H AAL +  +P     P      NV G +NV++AA
Sbjct: 67  ILNATRGVDFIYHAAALKQ--VPSCEFHPMEAVKTNVLGTENVLEAA 111

The FnlA enzyme is the first step in the biosynthesis of UDP-FucNAc from UDP-GlcNAc in E. coli (along with FnlB and FnlC). The proteins identified by this model include FnlA homologs in the O-antigen clusters of O4, O25, O26, O29 (Shigella D11), O118, O145 and O172 serotype strains, all of which produce O-antigens containing FucNAc (or the further modified FucNAm). A homolog from Pseudomonas aerugiosa serotype O11, WbjB, also involved in the biosynthesis of UDP-FucNAc has been characterized and is now believed to carry out both the initial 4,6-dehydratase reaction and the subsequent epimerization of the resulting methyl group at C-5. A phylogenetic tree of related sequences shows a distinct clade of enzymes involved in the biosynthesis of UDP-QuiNAc (Qui=qinovosamine). This clade appears to be descendant from the common ancestor of the Pseudomonas and E. coli fucose-biosynthesis enzymes. It has been hypothesized that the first step in the biosynthesis of these two compounds may be the same, and thus that these enzymes all have the same function. At present, lacking sufficient confirmation of this, the current model trusted cutoff only covers the tree segment surrounding the E. coli genes. The clades containing the Pseudomonas and QuiNAc biosynthesis enzymes score above the noise cutoff. Immediately below the noise cutoff are enzymes involved in the biosynthesis of UDP-RhaNAc (Rha=rhamnose), which again may or may not produce the same product. Length = 337

>gnl|CDD|224014 COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

 Score = 42.7 bits (101), Expect = 2e-04
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 10/70 (14%)

Query: 1  MKI-LVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-------GLPSEG--ALELVY 50
           K+ L++G +G  G  L   LL++G+ V  + RR+S  +         P      L L Y
Sbjct: 2  GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHY 61

Query: 51 GDVTDYRSLV 60
          GD+TD  +L+
Sbjct: 62 GDLTDSSNLL 71

Length = 345

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 41.7 bits (98), Expect = 2e-04
 Identities = 50/209 (23%), Positives = 74/209 (35%), Gaps = 59/209 (28%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           +LV+G SG +GG              A+ R       L S G+ +++   V   R     
Sbjct: 1   VLVTGGSGGIGG--------------AIARW------LASRGSPKVL---VVSRRD---- 33

Query: 63  CFGCHVIFHTAALVEPWLPD------PSRFFAVNVEGLKNVVQAAKE---TKTVEKIIYT 113
                V+ H AA+++             R    NV G + +++AA+E    K + + I  
Sbjct: 34  -----VVVHNAAILDDGRLIDLTGSRIERAIRANVVGTRRLLEAARELMKAKRLGRFILI 88

Query: 114 SSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE----GLPIVPVYPG 169
           SS   L    G                 Y  SKA  D +A Q ASE    GLP   V  G
Sbjct: 89  SSVAGLF---GAPGLGG-----------YAASKAALDGLAQQWASEGWGNGLPATAVACG 134

Query: 170 VIYGPGKLTTGNLVAKLMIERFNGRLPGY 198
              G G         +++  R +G     
Sbjct: 135 TWAGSGMAKGPVAPEEILGNRRHGVRTMP 163

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|187651 cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptional regulator), HSCARG (an NADPH sensor), and triphenylmethane reductase (TMR) like proteins, atypical (a) SDRs

 Score = 41.8 bits (98), Expect = 2e-04
 Identities = 34/118 (28%), Positives = 49/118 (41%), Gaps = 11/118 (9%)

Query: 3   ILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           I V+GA+G  GG +   LL +G   VRA+VR     + L  +G  E+  GD      L  
Sbjct: 1   IAVTGATGQQGGSVIRHLLAKGASQVRAVVRNVEKAATLADQGV-EVRQGDYNQPELLQK 59

Query: 62  ACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
           A  G   +F    +  P   +        ++  KNV  AA+     + I  T   FA 
Sbjct: 60  AFAGASKLF---IITGPHYDNTLE-----IKQGKNVADAARRAGV-KHIYSTGYAFAE 108

Atypical SDRs belonging to this subgroup include NmrA, HSCARG, and TMR, these proteins bind NAD(P) but they lack the usual catalytic residues of the SDRs. Atypical SDRs are distinct from classical SDRs. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. TMR, an NADP-binding protein, lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 224

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 40.8 bits (96), Expect = 5e-04
 Identities = 37/150 (24%), Positives = 57/150 (38%), Gaps = 25/150 (16%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVT---DYR 57
            L++G    LG  L    + +G  V  L R    ++ L ++   A+  V GDV    D  
Sbjct: 7   ALITGGGSGLGRALVERFVAEGAKVAVLDRSAEKVAELRADFGDAVVGVEGDVRSLADNE 66

Query: 58  SLVD---ACFGCHVIF--------HTAALVE-PWLPDPSRF---FAVNVEGLKNVVQAA- 101
             V      FG    F        ++ +LV+ P       F   F +NV+G     +AA 
Sbjct: 67  RAVARCVERFGKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDELFHINVKGYILGAKAAL 126

Query: 102 -KETKTVEKIIYT---SSFFALGSTDGYIA 127
                T   +I+T   + F+  G    Y A
Sbjct: 127 PALYATEGSVIFTVSNAGFYPGGGGPLYTA 156

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|215072 PLN00141, PLN00141, Tic62-NAD(P)-related group II protein; Provisional

 Score = 40.6 bits (95), Expect = 5e-04
 Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 6/128 (4%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-LPSEGALELVYGDVTD-YRSL 59
            + V+GA+G  G R+   LL +G +V+A VR        LP + +L++V  DVT+    L
Sbjct: 19  TVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKL 78

Query: 60  VDACF-GCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA 118
           V+A       +         +  DP   + V+  G  N+V+A ++   V + I  SS   
Sbjct: 79  VEAIGDDSDAVICATGFRRSF--DPFAPWKVDNFGTVNLVEACRK-AGVTRFILVSSILV 135

Query: 119 LGSTDGYI 126
            G+  G I
Sbjct: 136 NGAAMGQI 143

Length = 251

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 39.4 bits (92), Expect = 0.001
 Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 10/108 (9%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-GALELVYGDVTDY---R 57
           + LV+GA   +G     AL K G  V A+ R  +D+  L  E   +E V  D++D+    
Sbjct: 9   RALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRECPGIEPVCVDLSDWDATE 68

Query: 58  SLVDACFGCHVIFHTAALV--EPWLP----DPSRFFAVNVEGLKNVVQ 99
             + +     ++ + AA+   +P+L        R F VNV  + +V Q
Sbjct: 69  EALGSVGPVDLLVNNAAVAILQPFLEVTKEAFDRSFDVNVRAVIHVSQ 116

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 39.5 bits (93), Expect = 0.001
 Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 17/115 (14%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYG---DVTDYRSL 59
            L++G S   G  L  A L  GH V   VR  +  +        +       DVTD+ ++
Sbjct: 7   WLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADF-EALHPDRALARLLDVTDFDAI 65

Query: 60  ------VDACFG-CHVIF------HTAALVEPWLPDPSRFFAVNVEGLKNVVQAA 101
                  +A FG   V+       H  A+ E  L +  R F VNV G   + +A 
Sbjct: 66  DAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAV 120

Length = 277

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 39.2 bits (92), Expect = 0.001
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 3  ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
          IL++G S  +G     AL   G  V A  R+  D++ L +EG LE    D  +  S+   
Sbjct: 7  ILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEG-LEAFQLDYAEPESIAAL 65

Length = 277

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 39.2 bits (92), Expect = 0.002
 Identities = 44/205 (21%), Positives = 72/205 (35%), Gaps = 47/205 (22%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD----------ISGLPSEGALELVYG 51
            +L++G S  +G  L   L+K+G +V  +V R+                 S   +  +  
Sbjct: 3   HVLITGGSSGIGKALAKELVKEGANV-IIVARSESKLEEAVEEIEAEANASGQKVSYISA 61

Query: 52  DVTDYRS-------LVDACFGCHVIFHTAALVEPWL---PDPSRF---FAVNVEGLKNVV 98
           D++DY          V+      ++ + A +  P L        F     VN  G  NV 
Sbjct: 62  DLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGLFEDLTAEEFERGMDVNYFGSLNVA 121

Query: 99  QAA----KETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VAD 150
            A     KE +    I++ SS  AL    GY              + Y  SK     +A+
Sbjct: 122 HAVLPLMKEQRPG-HIVFVSSQAALVGIYGY--------------SAYCPSKFALRGLAE 166

Query: 151 KIALQAASEGLPIVPVYPGVIYGPG 175
            +  +     + +  VYP     PG
Sbjct: 167 SLRQELKPYNIRVSVVYPPDTDTPG 191

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|234212 TIGR03443, alpha_am_amid, L-aminoadipate-semialdehyde dehydrogenase

 Score = 40.0 bits (94), Expect = 0.002
 Identities = 57/223 (25%), Positives = 88/223 (39%), Gaps = 49/223 (21%)

Query: 2    KILVSGASGYLGGRLCHALLKQGHS----VRALVRRTSDISGL-----PSEG-------- 44
             + ++GA+G+LG  +   LL +  +    V A VR  S+ +GL                 
Sbjct: 973  TVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEW 1032

Query: 45   --ALELVYGDV---------TDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEG 93
               +E+V GD+           +  L +      VI H  ALV  W+   S+    NV G
Sbjct: 1033 ASRIEVVLGDLSKEKFGLSDEKWSDLTNEV---DVIIHNGALVH-WVYPYSKLRDANVIG 1088

Query: 94   LKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEE---------------KYF 138
              NV+    E K  ++  + SS  AL  T+ Y+   +++ +                K  
Sbjct: 1089 TINVLNLCAEGKA-KQFSFVSSTSAL-DTEYYVNLSDELVQAGGAGIPESDDLMGSSKGL 1146

Query: 139  CTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGN 181
             T Y +SK VA+ I  +A   GL    V PG + G  K    N
Sbjct: 1147 GTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATN 1189

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. Length = 1389

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 39.2 bits (92), Expect = 0.002
 Identities = 48/192 (25%), Positives = 72/192 (37%), Gaps = 37/192 (19%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE---GALELVYGDVTDYRSL 59
            L++GAS  +G     AL + G  V    RR   +  L  E   GA   +  DVTD  ++
Sbjct: 9   ALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAV 68

Query: 60  VDAC------FG-CHVIFHTA--ALVEPW----LPDPSRFFAVNVEGLKNVVQAA----K 102
             A       FG   ++ + A  AL +P     L D  R    NV+GL N  +A      
Sbjct: 69  EAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMV 128

Query: 103 ETKTVEKIIYTSSFFALGSTDG---YIADENQVHEEKYFCTQYERSKAVADKIALQAASE 159
           E K+   II   S        G   Y A        K     +      +  +  + A  
Sbjct: 129 ERKSGH-IINLGSIAGRYPYPGGAVYGA-------TKAAVRAF------SLGLRQELAGT 174

Query: 160 GLPIVPVYPGVI 171
           G+ +  + PG++
Sbjct: 175 GIRVTVISPGLV 186

Length = 246

>gnl|CDD|200085 TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase

 Score = 38.9 bits (91), Expect = 0.002
 Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 16/104 (15%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           +IL++GA+G LG  L   L  +G  V AL R   D++    E    L+     D      
Sbjct: 1   RILITGANGQLGRELVQQLSPEGRVVVALTRSQLDLTDP--EALERLLRAIRPD------ 52

Query: 62  ACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKE 103
                  + +TAA   V+    DP + FAVN    +N+ +AA  
Sbjct: 53  ------AVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAAR 90

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 287

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 4/64 (6%)

Query: 3  ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-SEGALELVYGDVTD---YRS 58
           LV+GAS  +G  +  AL + G+ V   +R   D++ L  S G +E V  D  D    R+
Sbjct: 3  ALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAALSASGGDVEAVPYDARDPEDARA 62

Query: 59 LVDA 62
          LVDA
Sbjct: 63 LVDA 66

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs

 Score = 38.7 bits (91), Expect = 0.002
 Identities = 64/247 (25%), Positives = 93/247 (37%), Gaps = 50/247 (20%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           KILV+G  G +G  +   L ++G+    +V RTS           EL   D+TD +  V 
Sbjct: 1   KILVTGHRGLVGSAIVRVLARRGYEN--VVFRTSK----------EL---DLTD-QEAVR 44

Query: 62  ACFGCH---VIFHTAALVEPW---LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
           A F       + H AA V      +  P+ F   N+    NV+ AA     V+K      
Sbjct: 45  AFFEKEKPDYVIHLAAKVGGIVANMTYPADFLRDNLLINDNVIHAAHRFG-VKK------ 97

Query: 116 FFALGSTDGYIADENQVHEEKYFCTQY----ERSKAVADKIALQAASE------GLPIVP 165
              LGS+  Y     Q  +E    T          A+A K A     E      G   + 
Sbjct: 98  LVFLGSSCIYPDLAPQPIDESDLLTGPPEPTNEGYAIA-KRAGLKLCEAYRKQYGCDYIS 156

Query: 166 VYPGVIYGPG---KLTTGNLVAKLMIERF-NGRLPG-----YIGYGNDRFSFCHVDDVVD 216
           V P  +YGP         +++  L I +F   +L G       G G  R  F + DD+  
Sbjct: 157 VMPTNLYGPHDNFDPENSHVIPAL-IRKFHEAKLRGGKEVTVWGSGTPRREFLYSDDLAR 215

Query: 217 GHIAAME 223
             +  +E
Sbjct: 216 AIVFLLE 222

GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	334
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	100.0
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	100.0
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	100.0
PLN02206	442	UDP-glucuronate decarboxylase	100.0
PLN02695	370	GDP-D-mannose-3',5'-epimerase	100.0
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	100.0
PLN02214	342	cinnamoyl-CoA reductase	100.0
PLN00198	338	anthocyanidin reductase; Provisional	100.0
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	100.0
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	100.0
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02653	340	GDP-mannose 4,6-dehydratase	100.0
PLN02896	353	cinnamyl-alcohol dehydrogenase	100.0
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	100.0
PLN02260	668	probable rhamnose biosynthetic enzyme	100.0
PLN02650	351	dihydroflavonol-4-reductase	100.0
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	100.0
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	100.0
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	100.0
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	100.0
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	100.0
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	100.0
PRK10675	338	UDP-galactose-4-epimerase; Provisional	100.0
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	100.0
PLN02240	352	UDP-glucose 4-epimerase	100.0
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	100.0
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	100.0
PLN00016	378	RNA-binding protein; Provisional	100.0
CHL00194	317	ycf39 Ycf39; Provisional	100.0
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	100.0
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	100.0
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	100.0
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	100.0
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	100.0
PLN02686	367	cinnamoyl-CoA reductase	100.0
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	100.0
PRK07201	657	short chain dehydrogenase; Provisional	100.0
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	100.0
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	100.0
PLN02996	491	fatty acyl-CoA reductase	100.0
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	100.0
PRK05865	854	hypothetical protein; Provisional	100.0
PLN02583	297	cinnamoyl-CoA reductase	100.0
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	100.0
TIGR01746	367	Thioester-redct thioester reductase domain. It has	100.0
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	100.0
PLN02778	298	3,5-epimerase/4-reductase	100.0
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	100.0
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.98
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.97
PLN02503	605	fatty acyl-CoA reductase 2	99.97
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.97
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.97
PRK12320	699	hypothetical protein; Provisional	99.96
PLN02260	668	probable rhamnose biosynthetic enzyme	99.96
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.96
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.96
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.94
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.94
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.94
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.94
KOG2774	366	consensus NAD dependent epimerase [General functio	99.93
PRK06482	276	short chain dehydrogenase; Provisional	99.93
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.91
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.91
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.9
PLN03209	576	translocon at the inner envelope of chloroplast su	99.9
PRK07775	274	short chain dehydrogenase; Provisional	99.9
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.9
PRK07806	248	short chain dehydrogenase; Provisional	99.89
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.89
PRK09135	249	pteridine reductase; Provisional	99.89
PRK05875	276	short chain dehydrogenase; Provisional	99.89
PRK08263	275	short chain dehydrogenase; Provisional	99.89
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.88
PRK07067	257	sorbitol dehydrogenase; Provisional	99.88
PRK07074	257	short chain dehydrogenase; Provisional	99.88
PRK05876	275	short chain dehydrogenase; Provisional	99.88
PRK06182	273	short chain dehydrogenase; Validated	99.88
PRK06180	277	short chain dehydrogenase; Provisional	99.88
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.88
PRK06914	280	short chain dehydrogenase; Provisional	99.87
PRK07774	250	short chain dehydrogenase; Provisional	99.87
PRK06194	287	hypothetical protein; Provisional	99.87
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.87
PRK12746	254	short chain dehydrogenase; Provisional	99.87
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.87
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.87
PRK08219	227	short chain dehydrogenase; Provisional	99.86
PRK07060	245	short chain dehydrogenase; Provisional	99.86
PRK12829	264	short chain dehydrogenase; Provisional	99.86
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.86
PRK12827	249	short chain dehydrogenase; Provisional	99.86
PRK06179	270	short chain dehydrogenase; Provisional	99.85
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.85
PRK06138	252	short chain dehydrogenase; Provisional	99.85
PRK12828	239	short chain dehydrogenase; Provisional	99.85
PRK09186	256	flagellin modification protein A; Provisional	99.85
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.85
PRK07577	234	short chain dehydrogenase; Provisional	99.85
PRK07890	258	short chain dehydrogenase; Provisional	99.85
PRK06128	300	oxidoreductase; Provisional	99.85
PRK10538	248	malonic semialdehyde reductase; Provisional	99.85
PRK05993	277	short chain dehydrogenase; Provisional	99.84
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.84
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.84
PRK06181	263	short chain dehydrogenase; Provisional	99.84
PRK06123	248	short chain dehydrogenase; Provisional	99.84
PLN02253	280	xanthoxin dehydrogenase	99.84
PRK05717	255	oxidoreductase; Validated	99.84
PRK12939	250	short chain dehydrogenase; Provisional	99.84
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.84
PRK08264	238	short chain dehydrogenase; Validated	99.84
PRK08017	256	oxidoreductase; Provisional	99.84
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.83
PRK06701	290	short chain dehydrogenase; Provisional	99.83
PRK06500	249	short chain dehydrogenase; Provisional	99.83
PRK08628	258	short chain dehydrogenase; Provisional	99.83
PRK09134	258	short chain dehydrogenase; Provisional	99.83
PRK06523	260	short chain dehydrogenase; Provisional	99.83
PRK08324	681	short chain dehydrogenase; Validated	99.83
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.83
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.83
PRK07024	257	short chain dehydrogenase; Provisional	99.82
PRK05650	270	short chain dehydrogenase; Provisional	99.82
PRK06398	258	aldose dehydrogenase; Validated	99.82
PRK06057	255	short chain dehydrogenase; Provisional	99.82
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.82
PRK07985	294	oxidoreductase; Provisional	99.81
PRK07856	252	short chain dehydrogenase; Provisional	99.81
PRK06841	255	short chain dehydrogenase; Provisional	99.81
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.81
PRK06196	315	oxidoreductase; Provisional	99.81
PRK07454	241	short chain dehydrogenase; Provisional	99.81
PRK09291	257	short chain dehydrogenase; Provisional	99.81
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.81
PRK07041	230	short chain dehydrogenase; Provisional	99.81
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.81
PRK07814	263	short chain dehydrogenase; Provisional	99.81
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.81
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.81
PRK07825	273	short chain dehydrogenase; Provisional	99.81
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.81
PRK07326	237	short chain dehydrogenase; Provisional	99.8
PRK12937	245	short chain dehydrogenase; Provisional	99.8
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.8
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.8
PRK06101	240	short chain dehydrogenase; Provisional	99.8
PRK06949	258	short chain dehydrogenase; Provisional	99.8
PRK08643	256	acetoin reductase; Validated	99.8
PRK05693	274	short chain dehydrogenase; Provisional	99.8
PRK07102	243	short chain dehydrogenase; Provisional	99.8
PRK08267	260	short chain dehydrogenase; Provisional	99.8
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.79
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.79
PRK12744	257	short chain dehydrogenase; Provisional	99.79
PRK07069	251	short chain dehydrogenase; Validated	99.79
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.79
PRK08265	261	short chain dehydrogenase; Provisional	99.79
PRK07063	260	short chain dehydrogenase; Provisional	99.79
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.79
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.79
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.79
PRK07904	253	short chain dehydrogenase; Provisional	99.79
PRK12747	252	short chain dehydrogenase; Provisional	99.79
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.79
PRK07023	243	short chain dehydrogenase; Provisional	99.79
PRK06114	254	short chain dehydrogenase; Provisional	99.79
PRK09242	257	tropinone reductase; Provisional	99.79
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.79
PRK06172	253	short chain dehydrogenase; Provisional	99.78
PRK12742	237	oxidoreductase; Provisional	99.78
PRK06198	260	short chain dehydrogenase; Provisional	99.78
PRK07035	252	short chain dehydrogenase; Provisional	99.78
PRK08251	248	short chain dehydrogenase; Provisional	99.78
PRK05867	253	short chain dehydrogenase; Provisional	99.78
PRK08589	272	short chain dehydrogenase; Validated	99.78
PRK06483	236	dihydromonapterin reductase; Provisional	99.78
PRK07109	334	short chain dehydrogenase; Provisional	99.78
PRK07578	199	short chain dehydrogenase; Provisional	99.78
PRK07677	252	short chain dehydrogenase; Provisional	99.78
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.78
PRK12743	256	oxidoreductase; Provisional	99.77
PRK05866	293	short chain dehydrogenase; Provisional	99.77
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.77
PRK07478	254	short chain dehydrogenase; Provisional	99.77
PRK06924	251	short chain dehydrogenase; Provisional	99.77
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.77
PRK06197	306	short chain dehydrogenase; Provisional	99.77
PRK06139	330	short chain dehydrogenase; Provisional	99.77
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.77
PRK05884	223	short chain dehydrogenase; Provisional	99.76
PRK08339	263	short chain dehydrogenase; Provisional	99.76
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.76
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.76
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.76
COG2910	211	Putative NADH-flavin reductase [General function p	99.76
PRK08226	263	short chain dehydrogenase; Provisional	99.76
PRK07576	264	short chain dehydrogenase; Provisional	99.76
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.76
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.75
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.75
PRK07832	272	short chain dehydrogenase; Provisional	99.75
PRK06484	520	short chain dehydrogenase; Validated	99.75
PRK06953	222	short chain dehydrogenase; Provisional	99.75
PRK09072	263	short chain dehydrogenase; Provisional	99.75
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.74
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.74
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.74
PRK08278	273	short chain dehydrogenase; Provisional	99.74
PRK05872	296	short chain dehydrogenase; Provisional	99.74
PRK08177	225	short chain dehydrogenase; Provisional	99.74
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.74
PRK07831	262	short chain dehydrogenase; Provisional	99.73
PRK12367	245	short chain dehydrogenase; Provisional	99.72
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.72
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.72
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.72
PRK08703	239	short chain dehydrogenase; Provisional	99.71
PRK07062	265	short chain dehydrogenase; Provisional	99.71
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.71
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.71
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.71
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.71
PRK05854	313	short chain dehydrogenase; Provisional	99.7
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.7
PRK07201	657	short chain dehydrogenase; Provisional	99.7
PRK06940	275	short chain dehydrogenase; Provisional	99.7
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.69
PRK05855	582	short chain dehydrogenase; Validated	99.69
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.69
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.69
PRK07791	286	short chain dehydrogenase; Provisional	99.68
PRK06125	259	short chain dehydrogenase; Provisional	99.68
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.68
PLN02780	320	ketoreductase/ oxidoreductase	99.68
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.68
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.67
PRK05599	246	hypothetical protein; Provisional	99.67
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.67
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.66
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.66
PRK06484	520	short chain dehydrogenase; Validated	99.66
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.65
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.65
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.65
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.65
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.65
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.65
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.64
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.63
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.63
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.62
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.61
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.59
PLN00015	308	protochlorophyllide reductase	99.56
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.55
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.54
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.54
PRK08303	305	short chain dehydrogenase; Provisional	99.52
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.51
PRK08862	227	short chain dehydrogenase; Provisional	99.51
KOG0725	270	consensus Reductases with broad range of substrate	99.5
KOG1208	314	consensus Dehydrogenases with different specificit	99.5
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.5
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.49
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.48
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.47
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.46
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.44
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.41
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.4
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.39
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.34
COG1028	251	FabG Dehydrogenases with different specificities (	99.33
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.3
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.29
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.24
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.24
PRK08309	177	short chain dehydrogenase; Provisional	99.14
PTZ00325	321	malate dehydrogenase; Provisional	99.12
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.1
PRK06720	169	hypothetical protein; Provisional	99.01
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	99.01
PLN00106	323	malate dehydrogenase	98.99
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.89
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.86
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	98.81
PRK09620	229	hypothetical protein; Provisional	98.8
PRK05086	312	malate dehydrogenase; Provisional	98.73
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.71
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.66
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.65
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.56
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.55
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.36
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	98.34
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	98.32
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.29
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	98.21
PRK14982	340	acyl-ACP reductase; Provisional	98.2
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.18
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	98.17
COG0569	225	TrkA K+ transport systems, NAD-binding component [	98.13
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	98.07
PF13950	62	Epimerase_Csub: UDP-glucose 4-epimerase C-term sub	98.06
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.04
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.04
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	98.03
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.98
PRK09496	453	trkA potassium transporter peripheral membrane com	97.96
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.94
PRK05442	326	malate dehydrogenase; Provisional	97.91
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.88
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.84
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.8
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	97.78
COG3268	382	Uncharacterized conserved protein [Function unknow	97.78
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.7
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	97.68
PRK04148	134	hypothetical protein; Provisional	97.66
PRK12548	289	shikimate 5-dehydrogenase; Provisional	97.65
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.65
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	97.6
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	97.58
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.54
PTZ00117	319	malate dehydrogenase; Provisional	97.53
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.52
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.51
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.49
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	97.46
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	97.44
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	97.44
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.44
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	97.43
PRK06223	307	malate dehydrogenase; Reviewed	97.43
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	97.41
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	97.41
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.39
PLN02602	350	lactate dehydrogenase	97.38
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.35
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	97.35
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	97.35
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.33
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	97.31
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.31
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.3
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.3
PTZ00082	321	L-lactate dehydrogenase; Provisional	97.3
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	97.27
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.25
PRK09496	453	trkA potassium transporter peripheral membrane com	97.25
PRK00048	257	dihydrodipicolinate reductase; Provisional	97.24
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.24
PLN02383	344	aspartate semialdehyde dehydrogenase	97.23
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.22
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	97.22
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.2
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	97.16
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	97.15
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	97.14
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	97.14
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	97.13
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	97.13
COG4982	866	3-oxoacyl-[acyl-carrier protein]	97.11
PRK08328	231	hypothetical protein; Provisional	97.1
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	97.03
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.02
PRK08655	437	prephenate dehydrogenase; Provisional	97.0
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.0
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.98
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	96.97
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.96
PRK08223	287	hypothetical protein; Validated	96.94
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.92
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.91
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.9
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	96.88
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.87
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	96.86
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	96.85
PRK03659	601	glutathione-regulated potassium-efflux system prot	96.84
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.83
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	96.81
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.8
PRK10669	558	putative cation:proton antiport protein; Provision	96.79
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	96.73
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	96.7
PLN02353	473	probable UDP-glucose 6-dehydrogenase	96.69
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	96.67
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.67
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.66
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.63
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.61
PRK07877	722	hypothetical protein; Provisional	96.53
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	96.52
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	96.48
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.48
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.48
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.48
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	96.47
KOG0172	445	consensus Lysine-ketoglutarate reductase/saccharop	96.45
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.45
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.45
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.43
PRK07411	390	hypothetical protein; Validated	96.43
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	96.4
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.39
TIGR01142	380	purT phosphoribosylglycinamide formyltransferase 2	96.34
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	96.33
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	96.33
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.32
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.27
PRK07417	279	arogenate dehydrogenase; Reviewed	96.25
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.23
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	96.2
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.18
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	96.18
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.17
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	96.16
cd01491	286	Ube1_repeat1 Ubiquitin activating enzyme (E1), rep	96.15
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	96.14
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.13
cd01490	435	Ube1_repeat2 Ubiquitin activating enzyme (E1), rep	96.11
TIGR01019	286	sucCoAalpha succinyl-CoA synthetase, alpha subunit	96.09
PRK07574	385	formate dehydrogenase; Provisional	96.09
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	96.08
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.07
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	96.04
TIGR01161	352	purK phosphoribosylaminoimidazole carboxylase, Pur	96.03
PRK12921	305	2-dehydropantoate 2-reductase; Provisional	95.99
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	95.99
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	95.96
PRK08818	370	prephenate dehydrogenase; Provisional	95.96
PRK03562	621	glutathione-regulated potassium-efflux system prot	95.95
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	95.94
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	95.89
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	95.88
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	95.87
cd01488	291	Uba3_RUB Ubiquitin activating enzyme (E1) subunit	95.86
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.86
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.84
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	95.84
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	95.83
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	95.82
COG2099	257	CobK Precorrin-6x reductase [Coenzyme metabolism]	95.8
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.79
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	95.78
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.75
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	95.71
PRK14852	989	hypothetical protein; Provisional	95.69
COG0677	436	WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenas	95.68
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	95.64
PRK05708	305	2-dehydropantoate 2-reductase; Provisional	95.63
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	95.61
PLN02586	360	probable cinnamyl alcohol dehydrogenase	95.6
PRK06444	197	prephenate dehydrogenase; Provisional	95.6
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	95.59
PRK14851	679	hypothetical protein; Provisional	95.57
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	95.57
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	95.57
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	95.56
PRK15182	425	Vi polysaccharide biosynthesis protein TviB; Provi	95.55
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.54
PRK12480	330	D-lactate dehydrogenase; Provisional	95.53
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	95.5
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	95.5
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	95.49
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.48
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	95.47
cd01486	307	Apg7 Apg7 is an E1-like protein, that activates tw	95.45
PRK13940	414	glutamyl-tRNA reductase; Provisional	95.44
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	95.41
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	95.4
COG1893	307	ApbA Ketopantoate reductase [Coenzyme metabolism]	95.4
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	95.39
TIGR00877	423	purD phosphoribosylamine--glycine ligase. This enz	95.39
cd01493	425	APPBP1_RUB Ubiquitin activating enzyme (E1) subuni	95.38
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	95.36
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.34
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	95.33
COG1712	255	Predicted dinucleotide-utilizing enzyme [General f	95.33
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.32
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	95.29
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.29
TIGR03693	637	ocin_ThiF_like putative thiazole-containing bacter	95.28

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=4.1e-55  Score=359.42  Aligned_cols=299  Identities=22%  Similarity=0.336  Sum_probs=254.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcC-----CCCCCCCCCCCCeEEEEcCCCChhhHHHHhc--CCCEEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRR-----TSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFH   71 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~-----~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vih   71 (334)
                      |++|||||+||||++++++++++.  .+|+.++.=     ......+...++..|+++|+.|.+.+.+++.  ++|+|+|
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh   80 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH   80 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence            899999999999999999999875  446776652     2223334444689999999999999999998  5999999


Q ss_pred             eccc--cCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCC--ccCCCCCccccccccChHHHHHH
Q 019878           72 TAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG--YIADENQVHEEKYFCTQYERSKA  147 (334)
Q Consensus        72 ~a~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~--~~~~e~~~~~~~~~~~~Y~~sK~  147 (334)
                      +|+.  ++.+..+|..+.++|+.||.+||++++++....||+|+||..|||+-..  ...+|.++..|   .|||++||+
T Consensus        81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~P---sSPYSASKA  157 (340)
T COG1088          81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNP---SSPYSASKA  157 (340)
T ss_pred             echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCC---CCCcchhhh
Confidence            9997  5567889999999999999999999999943359999999999997653  25667666665   599999999


Q ss_pred             HHHHHHHHHhh-cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC
Q 019878          148 VADKIALQAAS-EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR  226 (334)
Q Consensus       148 ~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~  226 (334)
                      .++.+++.|.+ +|++++|.|+++-|||...+ ..+++.++.+++.|.++.++|+|.+.|||+||+|-|+|+..++.+..
T Consensus       158 asD~lVray~~TYglp~~ItrcSNNYGPyqfp-EKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~  236 (340)
T COG1088         158 ASDLLVRAYVRTYGLPATITRCSNNYGPYQFP-EKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGK  236 (340)
T ss_pred             hHHHHHHHHHHHcCCceEEecCCCCcCCCcCc-hhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcCc
Confidence            99999999986 79999999999999998754 78999999999999999999999999999999999999999999998


Q ss_pred             CCCeEEecC-CCCCHHHHHHHHHHHhCCCCCc-----ccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceec
Q 019878          227 SGERYLLTG-ENASFMQIFDMAAVITGTSRPR-----FCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYS  300 (334)
Q Consensus       227 ~g~~~~i~g-~~~s~~e~~~~i~~~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  300 (334)
                      .|++|||+| ...+..|+++.|++.+|+..+.     ..+                   ...|        .-...+.+|
T Consensus       237 ~GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~~~~~li~~V-------------------~DRp--------GHD~RYaid  289 (340)
T COG1088         237 IGETYNIGGGNERTNLEVVKTICELLGKDKPDYRDLITFV-------------------EDRP--------GHDRRYAID  289 (340)
T ss_pred             CCceEEeCCCccchHHHHHHHHHHHhCccccchhhheEec-------------------cCCC--------CCccceeec
Confidence            999999975 6699999999999999987763     111                   0110        012344689


Q ss_pred             hHHHHHhcCCCCC-CHHHHHHHHHHHHHhcC
Q 019878          301 CVKAKTELGYNPR-SLKEGLQEVLPWLRSSG  330 (334)
Q Consensus       301 ~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~~  330 (334)
                      .+|++++|||+|. +|++||+++++||+++.
T Consensus       290 ~~Ki~~eLgW~P~~~fe~GlrkTv~WY~~N~  320 (340)
T COG1088         290 ASKIKRELGWRPQETFETGLRKTVDWYLDNE  320 (340)
T ss_pred             hHHHhhhcCCCcCCCHHHHHHHHHHHHHhch
Confidence            9999999999999 99999999999998864

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=2.2e-50  Score=333.30  Aligned_cols=296  Identities=24%  Similarity=0.330  Sum_probs=244.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC-CCCCCCCCCeEEEEcCCCChhhHHHHhcC--CCEEEEeccc--
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAAL--   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vih~a~~--   75 (334)
                      |+||||||+||||+|.+.+|++.|++|+++++-... ...+... .++++++|+.|.+.+.+++++  +|+|||+||.  
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~-~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~   79 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL-QFKFYEGDLLDRALLTAVFEENKIDAVVHFAASIS   79 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc-cCceEEeccccHHHHHHHHHhcCCCEEEECccccc
Confidence            899999999999999999999999999999985432 2223221 168999999999999999975  9999999997  


Q ss_pred             cCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHH
Q 019878           76 VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ  155 (334)
Q Consensus        76 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~  155 (334)
                      +..+..+|..+++.|+.||.+|+++|+++ ++++|||.||+.|||.+...|..|+.+..|   .+|||+||++.|+++++
T Consensus        80 VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~-gv~~~vFSStAavYG~p~~~PI~E~~~~~p---~NPYG~sKlm~E~iL~d  155 (329)
T COG1087          80 VGESVQNPLKYYDNNVVGTLNLIEAMLQT-GVKKFIFSSTAAVYGEPTTSPISETSPLAP---INPYGRSKLMSEEILRD  155 (329)
T ss_pred             cchhhhCHHHHHhhchHhHHHHHHHHHHh-CCCEEEEecchhhcCCCCCcccCCCCCCCC---CCcchhHHHHHHHHHHH
Confidence            56677899999999999999999999999 799999999999999999989999988776   59999999999999999


Q ss_pred             Hhh-cCCCEEEEecCceecCCCC--------CchhHHHHHHHHHHcCCC-Cccc------cCCCCceeeeeHHHHHHHHH
Q 019878          156 AAS-EGLPIVPVYPGVIYGPGKL--------TTGNLVAKLMIERFNGRL-PGYI------GYGNDRFSFCHVDDVVDGHI  219 (334)
Q Consensus       156 ~~~-~g~~~~ilR~~~v~G~~~~--------~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~i~v~D~a~a~~  219 (334)
                      +.+ +++++++||..++.|....        +..++++..+..++.... ..++      .+|.-.||||||.|+|+|.+
T Consensus       156 ~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~  235 (329)
T COG1087         156 AAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHV  235 (329)
T ss_pred             HHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHHH
Confidence            875 6999999999999996321        224566666666653333 3444      35667799999999999999


Q ss_pred             HHhhcCC-C--CCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhc
Q 019878          220 AAMEKGR-S--GERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAH  295 (334)
Q Consensus       220 ~~~~~~~-~--g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (334)
                      .+++.-. .  ..+||++ |...|..|+++.+.++.|.+.|....|.               ..|..            .
T Consensus       236 ~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~~~~~R---------------R~GDp------------a  288 (329)
T COG1087         236 LALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVEIAPR---------------RAGDP------------A  288 (329)
T ss_pred             HHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcCceeeCCC---------------CCCCC------------c
Confidence            9987522 2  2599995 8999999999999999999887754331               11111            1


Q ss_pred             cceechHHHHHhcCCCCC--CHHHHHHHHHHHHHh
Q 019878          296 QWAYSCVKAKTELGYNPR--SLKEGLQEVLPWLRS  328 (334)
Q Consensus       296 ~~~~d~~k~~~~lG~~p~--~~~e~i~~~~~~~~~  328 (334)
                      ..+.|++|++++|||+|+  ++++.++...+|...
T Consensus       289 ~l~Ad~~kA~~~Lgw~p~~~~L~~ii~~aw~W~~~  323 (329)
T COG1087         289 ILVADSSKARQILGWQPTYDDLEDIIKDAWDWHQQ  323 (329)
T ss_pred             eeEeCHHHHHHHhCCCcccCCHHHHHHHHHHHhhh
Confidence            224699999999999999  999999999999983

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=1.1e-49  Score=357.33  Aligned_cols=304  Identities=19%  Similarity=0.278  Sum_probs=238.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----C------CCCCCeEEEEcCCCChhhHHHHhcCCCEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----L------PSEGALELVYGDVTDYRSLVDACFGCHVIF   70 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~------~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   70 (334)
                      |||||||||||||++|+++|+++|++|++++|.......    +      ....+++++.+|+.|.+.+..+++++|+||
T Consensus        16 ~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d~Vi   95 (348)
T PRK15181         16 KRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVDYVL   95 (348)
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCCEEE
Confidence            689999999999999999999999999999986532111    0      011258899999999999999999999999


Q ss_pred             EeccccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHH
Q 019878           71 HTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAV  148 (334)
Q Consensus        71 h~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~  148 (334)
                      |+|+....  ...++..++++|+.++.+++++|++. ++++|||+||..+||.....+..|+.+..   |.++|+.+|.+
T Consensus        96 HlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~e~~~~~---p~~~Y~~sK~~  171 (348)
T PRK15181         96 HQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDA-HVSSFTYAASSSTYGDHPDLPKIEERIGR---PLSPYAVTKYV  171 (348)
T ss_pred             ECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeechHhhCCCCCCCCCCCCCCC---CCChhhHHHHH
Confidence            99997432  33566778999999999999999998 78999999999999976554444544333   35789999999


Q ss_pred             HHHHHHHHhh-cCCCEEEEecCceecCCCCCc---hhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhc
Q 019878          149 ADKIALQAAS-EGLPIVPVYPGVIYGPGKLTT---GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEK  224 (334)
Q Consensus       149 ~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~  224 (334)
                      +|.+++.+.+ +|++++++||+++|||++.+.   ..+++.++.+++.++.+.++++|++.|+|+|++|+|+++..++..
T Consensus       172 ~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~  251 (348)
T PRK15181        172 NELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATT  251 (348)
T ss_pred             HHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhc
Confidence            9999988764 699999999999999986433   246777788888888888889999999999999999999987764


Q ss_pred             C---CCCCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceec
Q 019878          225 G---RSGERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYS  300 (334)
Q Consensus       225 ~---~~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  300 (334)
                      +   ..+++||++ |+.+|+.|+++.+.+.++..........                 .......+.    ......+|
T Consensus       252 ~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~-----------------~~~~~~~~~----~~~~~~~d  310 (348)
T PRK15181        252 NDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAE-----------------PIYKDFRDG----DVKHSQAD  310 (348)
T ss_pred             ccccCCCCEEEecCCCcEeHHHHHHHHHHHhCcccccccCCC-----------------cccCCCCCC----cccccccC
Confidence            3   257899996 6889999999999998874321100000                 000000000    01234579


Q ss_pred             hHHHHHhcCCCCC-CHHHHHHHHHHHHHhc
Q 019878          301 CVKAKTELGYNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       301 ~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~  329 (334)
                      ++|++++|||+|+ +++|+|+++++|+..+
T Consensus       311 ~~k~~~~lGw~P~~sl~egl~~~~~w~~~~  340 (348)
T PRK15181        311 ITKIKTFLSYEPEFDIKEGLKQTLKWYIDK  340 (348)
T ss_pred             HHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence            9999999999999 9999999999999775

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=100.00  E-value=6e-47  Score=337.81  Aligned_cols=326  Identities=40%  Similarity=0.716  Sum_probs=269.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~   80 (334)
                      |+||||||+||||+++++.|+++|++|++++|++++...+.. .+++++.+|+.|.+++.++++++|+|||+|+....+.
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~   79 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEG-LDVEIVEGDLRDPASLRKAVAGCRALFHVAADYRLWA   79 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccccc-CCceEEEeeCCCHHHHHHHHhCCCEEEEeceecccCC
Confidence            899999999999999999999999999999998765443332 2689999999999999999999999999998755455


Q ss_pred             CCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccC-CCccCCCCCccccccccChHHHHHHHHHHHHHHHhh-
Q 019878           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST-DGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS-  158 (334)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~-~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-  158 (334)
                      .++...++.|+.++.++++++.+. +++++|++||.++|+.. .+.+.+|+.+..+....+.|+.+|.++|+.++++.. 
T Consensus        80 ~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~  158 (328)
T TIGR03466        80 PDPEEMYAANVEGTRNLLRAALEA-GVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAE  158 (328)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHHHHh
Confidence            567788999999999999999987 68999999999999853 344556665554433456899999999999999875 


Q ss_pred             cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCCCCeEEecCCCC
Q 019878          159 EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTGENA  238 (334)
Q Consensus       159 ~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g~~~~i~g~~~  238 (334)
                      +|++++++||+++||++.... .....++.....+..+...   +..++|+|++|+|+++..+++++..+..|+++++.+
T Consensus       159 ~~~~~~ilR~~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~~~~~  234 (328)
T TIGR03466       159 KGLPVVIVNPSTPIGPRDIKP-TPTGRIIVDFLNGKMPAYV---DTGLNLVHVDDVAEGHLLALERGRIGERYILGGENL  234 (328)
T ss_pred             cCCCEEEEeCCccCCCCCCCC-CcHHHHHHHHHcCCCceee---CCCcceEEHHHHHHHHHHHHhCCCCCceEEecCCCc
Confidence            599999999999999975422 1223344444455444332   244689999999999999998877788999988889


Q ss_pred             CHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhcCCCCCCHHHH
Q 019878          239 SFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPRSLKEG  318 (334)
Q Consensus       239 s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~e~  318 (334)
                      |+.|+++.+.+.+|.+.+...+|.+.....+.+.+.+....+..+..+............+|++|+++.|||+|++++++
T Consensus       235 s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~  314 (328)
T TIGR03466       235 TLKQILDKLAEITGRPAPRVKLPRWLLLPVAWGAEALARLTGKEPRVTVDGVRMAKKKMFFSSAKAVRELGYRQRPAREA  314 (328)
T ss_pred             CHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHhccCCCChHHHHHHcCCCCcCHHHH
Confidence            99999999999999988888899999999888888887766666655555555556677889999999999999999999


Q ss_pred             HHHHHHHHHhcCCC
Q 019878          319 LQEVLPWLRSSGMI  332 (334)
Q Consensus       319 i~~~~~~~~~~~~~  332 (334)
                      |+++++||+++|++
T Consensus       315 i~~~~~~~~~~~~~  328 (328)
T TIGR03466       315 LRDAVEWFRANGYL  328 (328)
T ss_pred             HHHHHHHHHHhCCC
Confidence            99999999998764

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=100.00  E-value=5.6e-47  Score=340.12  Aligned_cols=314  Identities=18%  Similarity=0.259  Sum_probs=238.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC-CCeEEEEEcCCCCCCCCCCCCCeEEEEcCCC-ChhhHHHHhcCCCEEEEeccccCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVT-DYRSLVDACFGCHVIFHTAALVEP   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~-d~~~~~~~~~~~d~vih~a~~~~~   78 (334)
                      |+|||||||||||++|++.|+++ |++|++++|+..+...+...++++++.+|++ +.+.+.++++++|+|||+|+...+
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa~~~~   81 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVAIATP   81 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcccCCh
Confidence            68999999999999999999986 6999999987654333322236999999998 677788888899999999997433


Q ss_pred             --CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCcc----ccccccChHHHHHHHHHHH
Q 019878           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVH----EEKYFCTQYERSKAVADKI  152 (334)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~----~~~~~~~~Y~~sK~~~E~~  152 (334)
                        ...++...+++|+.++.+++++|++. + ++|||+||..+||.....+..|+...    +...+.+.|+.+|.++|++
T Consensus        82 ~~~~~~p~~~~~~n~~~~~~ll~aa~~~-~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~  159 (347)
T PRK11908         82 ATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLMDRV  159 (347)
T ss_pred             HHhhcCcHHHHHHHHHHHHHHHHHHHhc-C-CeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHHHHHH
Confidence              34567788899999999999999987 4 69999999999997554344443321    2223457899999999999


Q ss_pred             HHHHhh-cCCCEEEEecCceecCCCCC-------chhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhc
Q 019878          153 ALQAAS-EGLPIVPVYPGVIYGPGKLT-------TGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEK  224 (334)
Q Consensus       153 ~~~~~~-~g~~~~ilR~~~v~G~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~  224 (334)
                      ++.+.+ +|++++++||+++|||+..+       ..+++..++.++..+....+++++++.|+|+|++|+++++..++++
T Consensus       160 ~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~  239 (347)
T PRK11908        160 IWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMKIIEN  239 (347)
T ss_pred             HHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHHHHhC
Confidence            999874 79999999999999997532       2346777888888888777778889999999999999999999987


Q ss_pred             CC---CCCeEEecC--CCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCC-CCHHHHHHhhccce
Q 019878          225 GR---SGERYLLTG--ENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPL-ISYPTVHVLAHQWA  298 (334)
Q Consensus       225 ~~---~g~~~~i~g--~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  298 (334)
                      +.   .|++||+++  +.+|+.|+++.+.+.++..+.....+.+. ..           ....+. ..... ......+.
T Consensus       240 ~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~-~~-----------~~~~~~~~~~~~-~~~~~~~~  306 (347)
T PRK11908        240 KDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYAESAKKV-KL-----------VETTSGAYYGKG-YQDVQNRV  306 (347)
T ss_pred             ccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCccccccccccc-cc-----------ccCCchhccCcC-cchhcccc
Confidence            53   478999975  36999999999999998654331110000 00           000000 00000 00012334


Q ss_pred             echHHHHHhcCCCCC-CHHHHHHHHHHHHHhc
Q 019878          299 YSCVKAKTELGYNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       299 ~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~  329 (334)
                      .|++|++++|||+|+ +++++++++++|+.++
T Consensus       307 ~d~~k~~~~lGw~p~~~l~~~l~~~~~~~~~~  338 (347)
T PRK11908        307 PKIDNTMQELGWAPKTTMDDALRRIFEAYRGH  338 (347)
T ss_pred             CChHHHHHHcCCCCCCcHHHHHHHHHHHHHHH
Confidence            588999999999999 9999999999999765

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=2.4e-46  Score=340.47  Aligned_cols=311  Identities=17%  Similarity=0.217  Sum_probs=231.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC-CCeEEEEEcCCCCCCCCC------CCCCeEEEEcCCCChhhHHHHhcCCCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLP------SEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~------~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a   73 (334)
                      |||||||||||||++|++.|+++ |++|++++|+..+...+.      ..++++++.+|+.|.+.+.+++.++|+|||+|
T Consensus        15 ~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~ViHlA   94 (386)
T PLN02427         15 LTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLTINLA   94 (386)
T ss_pred             cEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEEEEcc
Confidence            79999999999999999999998 599999998765432221      11369999999999999999999999999999


Q ss_pred             cccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCcc------------------
Q 019878           74 ALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVH------------------  133 (334)
Q Consensus        74 ~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~------------------  133 (334)
                      +....  +..++...+..|+.++.+++++|++. + ++|||+||.++||.....+.+|+.+.                  
T Consensus        95 a~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~-~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~~  172 (386)
T PLN02427         95 AICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-N-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIF  172 (386)
T ss_pred             cccChhhhhhChHHHHHHHHHHHHHHHHHHHhc-C-CEEEEEeeeeeeCCCcCCCCCccccccccccccccccccccccc
Confidence            97443  22345566778999999999999987 4 79999999999997543222222211                  


Q ss_pred             -ccccccChHHHHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCC----------chhHHHHHHHHHHcCCCCccccC
Q 019878          134 -EEKYFCTQYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLT----------TGNLVAKLMIERFNGRLPGYIGY  201 (334)
Q Consensus       134 -~~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~  201 (334)
                       +...+.+.|+.+|.++|+++..+.+ +|++++++||++||||+...          ...++..++.....+++..++++
T Consensus       173 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~  252 (386)
T PLN02427        173 GSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDG  252 (386)
T ss_pred             CCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEECC
Confidence             0112346899999999999998764 69999999999999997421          12344455566677877778888


Q ss_pred             CCCceeeeeHHHHHHHHHHHhhcCC--CCCeEEecC--CCCCHHHHHHHHHHHhCCCCCcc--cccHHHHHHHHHHHHHH
Q 019878          202 GNDRFSFCHVDDVVDGHIAAMEKGR--SGERYLLTG--ENASFMQIFDMAAVITGTSRPRF--CIPLWLIEAYGWILVFF  275 (334)
Q Consensus       202 ~~~~~~~i~v~D~a~a~~~~~~~~~--~g~~~~i~g--~~~s~~e~~~~i~~~~g~~~~~~--~~~~~~~~~~~~~~~~~  275 (334)
                      +++.++|+|++|+|+++..+++++.  .|++||+++  +.+|+.|+++.+.+.+|......  ....  .          
T Consensus       253 g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~--~----------  320 (386)
T PLN02427        253 GQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPALEEPT--V----------  320 (386)
T ss_pred             CCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhccccccccccccc--c----------
Confidence            8999999999999999999998753  578999974  47999999999999988521100  0000  0          


Q ss_pred             HHHhCCCCCCCHHHHHHhhccceechHHHHHhcCCCCC-CHHHHHHHHHHHHHhc
Q 019878          276 SRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~  329 (334)
                        ..+..+......  ........|.+|++++|||+|+ +++++|+++++|+...
T Consensus       321 --~~~~~~~~~~~~--~~~~~~~~d~~k~~~~lGw~p~~~l~~gl~~~~~~~~~~  371 (386)
T PLN02427        321 --DVSSKEFYGEGY--DDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHKT  371 (386)
T ss_pred             --ccCcccccCccc--cchhhccCCHHHHHHhcCCCcCccHHHHHHHHHHHHHHH
Confidence              000000000000  0112335699999999999999 9999999999998763

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=1.3e-46  Score=343.63  Aligned_cols=294  Identities=22%  Similarity=0.288  Sum_probs=232.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC-C---CCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-S---GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~---~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~   76 (334)
                      |||||||||||||++|+++|+++|++|++++|..... .   .+....+++++.+|+.+..     +.++|+|||+|+..
T Consensus       121 mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~-----~~~~D~ViHlAa~~  195 (436)
T PLN02166        121 LRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPI-----LLEVDQIYHLACPA  195 (436)
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECcccccc-----ccCCCEEEECceec
Confidence            8999999999999999999999999999999853211 1   1111236788999987643     45799999999874


Q ss_pred             CC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCc--cccccccChHHHHHHHHHHH
Q 019878           77 EP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQV--HEEKYFCTQYERSKAVADKI  152 (334)
Q Consensus        77 ~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~--~~~~~~~~~Y~~sK~~~E~~  152 (334)
                      ..  +..++..++++|+.++.+++++|+++ ++ +||++||.+|||.....+.+|+..  ..+..+.+.|+.+|.++|++
T Consensus       196 ~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~-g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~~  273 (436)
T PLN02166        196 SPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-GA-RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETL  273 (436)
T ss_pred             cchhhccCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHHHH
Confidence            33  33466788999999999999999998 44 899999999999765555556532  12223457899999999999


Q ss_pred             HHHHhh-cCCCEEEEecCceecCCCCC-chhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCCCCe
Q 019878          153 ALQAAS-EGLPIVPVYPGVIYGPGKLT-TGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGER  230 (334)
Q Consensus       153 ~~~~~~-~g~~~~ilR~~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g~~  230 (334)
                      ++.+.+ ++++++++||+++|||+... .+..+..++.+.+.++.+.+++++++.|+|+|++|+++++..+++.. .+++
T Consensus       274 ~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~-~~gi  352 (436)
T PLN02166        274 AMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGE-HVGP  352 (436)
T ss_pred             HHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcC-CCce
Confidence            999875 69999999999999998542 24567778888888888888899999999999999999999999764 3569


Q ss_pred             EEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhcC
Q 019878          231 YLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELG  309 (334)
Q Consensus       231 ~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG  309 (334)
                      ||++ ++.+|+.|+++.+.+.+|.+.+....|.                   .    ..    ......+|++|++++||
T Consensus       353 yNIgs~~~~Si~ela~~I~~~~g~~~~i~~~p~-------------------~----~~----~~~~~~~d~~Ka~~~LG  405 (436)
T PLN02166        353 FNLGNPGEFTMLELAEVVKETIDSSATIEFKPN-------------------T----AD----DPHKRKPDISKAKELLN  405 (436)
T ss_pred             EEeCCCCcEeHHHHHHHHHHHhCCCCCeeeCCC-------------------C----CC----CccccccCHHHHHHHcC
Confidence            9996 6789999999999999987644322110                   0    00    01233579999999999


Q ss_pred             CCCC-CHHHHHHHHHHHHHhc
Q 019878          310 YNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       310 ~~p~-~~~e~i~~~~~~~~~~  329 (334)
                      |+|+ +++++++++++|++++
T Consensus       406 w~P~~sl~egl~~~i~~~~~~  426 (436)
T PLN02166        406 WEPKISLREGLPLMVSDFRNR  426 (436)
T ss_pred             CCCCCCHHHHHHHHHHHHHHH
Confidence            9999 9999999999999763

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.5e-46  Score=306.41  Aligned_cols=303  Identities=20%  Similarity=0.324  Sum_probs=246.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhC--CCeEEEEEc-----CCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc--CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQ--GHSVRALVR-----RTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~--g~~V~~~~r-----~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vih~   72 (334)
                      ++|||||+||||++.+..+.+.  .++.+.++.     +..........++.+++.+|+.+...+..++.  ++|.|||+
T Consensus         8 ~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vihf   87 (331)
T KOG0747|consen    8 NVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIHF   87 (331)
T ss_pred             eEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhhh
Confidence            5999999999999999999986  345554443     22233334444689999999999999888875  49999999


Q ss_pred             cccc--CCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCC-CCCccccccccChHHHHHHHH
Q 019878           73 AALV--EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIAD-ENQVHEEKYFCTQYERSKAVA  149 (334)
Q Consensus        73 a~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~-e~~~~~~~~~~~~Y~~sK~~~  149 (334)
                      |+..  ..+..++..+.+.|+.++..|+++++..+++++|||+||..|||+..+...+ |.+.+.|   .++|+.+|+++
T Consensus        88 aa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nP---tnpyAasKaAa  164 (331)
T KOG0747|consen   88 AAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNP---TNPYAASKAAA  164 (331)
T ss_pred             HhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCC---CCchHHHHHHH
Confidence            9973  3466678889999999999999999999999999999999999998866555 6655555   59999999999


Q ss_pred             HHHHHHHh-hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCCC
Q 019878          150 DKIALQAA-SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSG  228 (334)
Q Consensus       150 E~~~~~~~-~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g  228 (334)
                      |++++.+. ++|++++++|.++||||++.+ ...++.++..+..+++..+.|+|.+.|+|+|++|+++|+..++++...|
T Consensus       165 E~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~-~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~Kg~~g  243 (331)
T KOG0747|consen  165 EMLVRSYGRSYGLPVVTTRMNNVYGPNQYP-EKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEKGELG  243 (331)
T ss_pred             HHHHHHHhhccCCcEEEEeccCccCCCcCh-HHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhcCCcc
Confidence            99999987 479999999999999999764 5677777777788888899999999999999999999999999997779


Q ss_pred             CeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHh
Q 019878          229 ERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTE  307 (334)
Q Consensus       229 ~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~  307 (334)
                      ++|||+ +.+.+..|+++.|.+......+..+.+.+..                   +.++. +.....+.+|.+|++ .
T Consensus       244 eIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~~~-------------------~v~dR-p~nd~Ry~~~~eKik-~  302 (331)
T KOG0747|consen  244 EIYNIGTDDEMRVIDLAKDICELFEKRLPNIDTEPFIF-------------------FVEDR-PYNDLRYFLDDEKIK-K  302 (331)
T ss_pred             ceeeccCcchhhHHHHHHHHHHHHHHhccCCCCCCcce-------------------ecCCC-CcccccccccHHHHH-h
Confidence            999996 6779999999999988877554433222111                   10111 111223568999999 7


Q ss_pred             cCCCCC-CHHHHHHHHHHHHHhc
Q 019878          308 LGYNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       308 lG~~p~-~~~e~i~~~~~~~~~~  329 (334)
                      |||+|+ ++++|++++++||.++
T Consensus       303 LGw~~~~p~~eGLrktie~y~~~  325 (331)
T KOG0747|consen  303 LGWRPTTPWEEGLRKTIEWYTKN  325 (331)
T ss_pred             cCCcccCcHHHHHHHHHHHHHhh
Confidence            999999 9999999999999874

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=100.00  E-value=8.9e-46  Score=356.44  Aligned_cols=318  Identities=19%  Similarity=0.264  Sum_probs=242.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC-CCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhh-HHHHhcCCCEEEEeccccCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRS-LVDACFGCHVIFHTAALVEP   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~-~~~~~~~~d~vih~a~~~~~   78 (334)
                      |+|||||||||||++|+++|+++ |++|++++|.......+...++++++.+|++|... +.++++++|+|||+||....
T Consensus       316 ~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlAa~~~~  395 (660)
T PRK08125        316 TRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATP  395 (660)
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECccccCc
Confidence            78999999999999999999985 79999999977543322222468999999998765 56778899999999997543


Q ss_pred             --CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCcc----ccccccChHHHHHHHHHHH
Q 019878           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVH----EEKYFCTQYERSKAVADKI  152 (334)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~----~~~~~~~~Y~~sK~~~E~~  152 (334)
                        ...++...+++|+.++.+++++|+++ + ++|||+||.++||.....+.+|+.+.    +...+.+.|+.||.++|++
T Consensus       396 ~~~~~~~~~~~~~Nv~~t~~ll~a~~~~-~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~  473 (660)
T PRK08125        396 IEYTRNPLRVFELDFEENLKIIRYCVKY-N-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLDRV  473 (660)
T ss_pred             hhhccCHHHHHHhhHHHHHHHHHHHHhc-C-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHHHHHHH
Confidence              33456678899999999999999998 4 79999999999997655556666542    2222457899999999999


Q ss_pred             HHHHhh-cCCCEEEEecCceecCCCCC-------chhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhc
Q 019878          153 ALQAAS-EGLPIVPVYPGVIYGPGKLT-------TGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEK  224 (334)
Q Consensus       153 ~~~~~~-~g~~~~ilR~~~v~G~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~  224 (334)
                      +..+.+ +|++++++||+++|||+...       ....+..++.+...++++.+++++++.|+|+|++|++++++.++++
T Consensus       474 ~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~  553 (660)
T PRK08125        474 IWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIEN  553 (660)
T ss_pred             HHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHHhc
Confidence            999874 69999999999999997532       1245677777777888877888999999999999999999999987


Q ss_pred             CC---CCCeEEecC-C-CCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhcccee
Q 019878          225 GR---SGERYLLTG-E-NASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAY  299 (334)
Q Consensus       225 ~~---~g~~~~i~g-~-~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (334)
                      +.   .|++||+++ + .+|+.|+++.+.+..|.+.....+|.+.....  . ... ...+..  .      .......+
T Consensus       554 ~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~--~-~~~-~~~~~~--~------~~~~~~~~  621 (660)
T PRK08125        554 KDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRDHFPPFAGFRV--V-ESS-SYYGKG--Y------QDVEHRKP  621 (660)
T ss_pred             cccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCcccccCCccccccc--c-ccc-cccccc--c------ccccccCC
Confidence            52   478999974 4 69999999999999986432222222110000  0 000 000000  0      00122346


Q ss_pred             chHHHHHhcCCCCC-CHHHHHHHHHHHHHhcCCC
Q 019878          300 SCVKAKTELGYNPR-SLKEGLQEVLPWLRSSGMI  332 (334)
Q Consensus       300 d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~~~~  332 (334)
                      |++|++++|||+|+ +++++|+++++|++++.-+
T Consensus       622 d~~ka~~~LGw~P~~~lee~l~~~i~~~~~~~~~  655 (660)
T PRK08125        622 SIRNARRLLDWEPKIDMQETIDETLDFFLRTVDL  655 (660)
T ss_pred             ChHHHHHHhCCCCCCcHHHHHHHHHHHHHhcccc
Confidence            99999999999999 9999999999999987543

>PLN02206 UDP-glucuronate decarboxylase

Probab=100.00  E-value=1.7e-45  Score=336.91  Aligned_cols=293  Identities=21%  Similarity=0.274  Sum_probs=230.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC-C---CCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-G---LPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~---~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~   76 (334)
                      |||||||||||||++|+++|+++|++|++++|...... .   .....+++++.+|+.+..     +.++|+|||+|+..
T Consensus       120 ~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~-----l~~~D~ViHlAa~~  194 (442)
T PLN02206        120 LRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPI-----LLEVDQIYHLACPA  194 (442)
T ss_pred             CEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccChh-----hcCCCEEEEeeeec
Confidence            79999999999999999999999999999987532111 1   111236888999987753     45799999999975


Q ss_pred             CC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCc--cccccccChHHHHHHHHHHH
Q 019878           77 EP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQV--HEEKYFCTQYERSKAVADKI  152 (334)
Q Consensus        77 ~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~--~~~~~~~~~Y~~sK~~~E~~  152 (334)
                      ..  +..++...+++|+.++.+++++|++. ++ +||++||..+|+.....+..|+..  ..|..+.+.|+.+|.++|++
T Consensus       195 ~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~-g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~~  272 (442)
T PLN02206        195 SPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETL  272 (442)
T ss_pred             chhhhhcCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHHHHH
Confidence            43  33467788999999999999999998 44 899999999999765555555532  22323457899999999999


Q ss_pred             HHHHhh-cCCCEEEEecCceecCCCCC-chhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCCCCe
Q 019878          153 ALQAAS-EGLPIVPVYPGVIYGPGKLT-TGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGER  230 (334)
Q Consensus       153 ~~~~~~-~g~~~~ilR~~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g~~  230 (334)
                      +..+.+ ++++++++||+++|||+... .++.+..++.+.+.++++.+++++++.|+|+|++|+|+++..++++. .+++
T Consensus       273 ~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~-~~g~  351 (442)
T PLN02206        273 TMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGE-HVGP  351 (442)
T ss_pred             HHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcC-CCce
Confidence            998764 69999999999999997532 23456777778888888888899999999999999999999998865 4559


Q ss_pred             EEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhcC
Q 019878          231 YLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELG  309 (334)
Q Consensus       231 ~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG  309 (334)
                      ||++ ++.+|+.|+++.+.+.+|.+..+...|.                   .+ .  .     .....+|++|++++||
T Consensus       352 yNIgs~~~~sl~Elae~i~~~~g~~~~i~~~p~-------------------~~-~--~-----~~~~~~d~sKa~~~LG  404 (442)
T PLN02206        352 FNLGNPGEFTMLELAKVVQETIDPNAKIEFRPN-------------------TE-D--D-----PHKRKPDITKAKELLG  404 (442)
T ss_pred             EEEcCCCceeHHHHHHHHHHHhCCCCceeeCCC-------------------CC-C--C-----ccccccCHHHHHHHcC
Confidence            9996 5789999999999999986544322211                   00 0  0     1122479999999999


Q ss_pred             CCCC-CHHHHHHHHHHHHHh
Q 019878          310 YNPR-SLKEGLQEVLPWLRS  328 (334)
Q Consensus       310 ~~p~-~~~e~i~~~~~~~~~  328 (334)
                      |+|+ +++++|+++++|+++
T Consensus       405 w~P~~~l~egl~~~~~~~~~  424 (442)
T PLN02206        405 WEPKVSLRQGLPLMVKDFRQ  424 (442)
T ss_pred             CCCCCCHHHHHHHHHHHHHH
Confidence            9999 999999999999976

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=100.00  E-value=6.2e-45  Score=328.19  Aligned_cols=297  Identities=19%  Similarity=0.208  Sum_probs=230.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCC--
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP--   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~--   78 (334)
                      |+|||||||||||++|++.|+++|++|++++|.......- ....++++.+|++|.+.+..++.++|+|||+|+....  
T Consensus        22 ~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~~~~~~  100 (370)
T PLN02695         22 LRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSE-DMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAADMGGMG  100 (370)
T ss_pred             CEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccccc-ccccceEEECCCCCHHHHHHHHhCCCEEEEcccccCCcc
Confidence            7899999999999999999999999999999865321110 0113678999999999998888899999999986432  


Q ss_pred             -CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCc----cCCCCCccccccccChHHHHHHHHHHHH
Q 019878           79 -WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGY----IADENQVHEEKYFCTQYERSKAVADKIA  153 (334)
Q Consensus        79 -~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~----~~~e~~~~~~~~~~~~Y~~sK~~~E~~~  153 (334)
                       ...++...+..|+.++.+++++|++. ++++|||+||..+|+.....    +..|+... +..|.+.|+.+|.++|+++
T Consensus       101 ~~~~~~~~~~~~N~~~t~nll~aa~~~-~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~-p~~p~s~Yg~sK~~~E~~~  178 (370)
T PLN02695        101 FIQSNHSVIMYNNTMISFNMLEAARIN-GVKRFFYASSACIYPEFKQLETNVSLKESDAW-PAEPQDAYGLEKLATEELC  178 (370)
T ss_pred             ccccCchhhHHHHHHHHHHHHHHHHHh-CCCEEEEeCchhhcCCccccCcCCCcCcccCC-CCCCCCHHHHHHHHHHHHH
Confidence             22345566789999999999999987 78999999999999965421    23333311 2234689999999999999


Q ss_pred             HHHhh-cCCCEEEEecCceecCCCCCch---hHHHHHHHHHHc-CCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCCC
Q 019878          154 LQAAS-EGLPIVPVYPGVIYGPGKLTTG---NLVAKLMIERFN-GRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSG  228 (334)
Q Consensus       154 ~~~~~-~g~~~~ilR~~~v~G~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g  228 (334)
                      +.+.+ .|++++++||+++|||+.....   .....++.+++. +....+++++++.++|+|++|+++++..++++. .+
T Consensus       179 ~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~~~-~~  257 (370)
T PLN02695        179 KHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTKSD-FR  257 (370)
T ss_pred             HHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHhcc-CC
Confidence            98764 6999999999999999653211   123345555544 355667789999999999999999999988764 46


Q ss_pred             CeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHh
Q 019878          229 ERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTE  307 (334)
Q Consensus       229 ~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~  307 (334)
                      ++||++ ++.+|+.|+++.+.+..|.+.+....|.                   ....         .....|++|++++
T Consensus       258 ~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~~~~~-------------------~~~~---------~~~~~d~sk~~~~  309 (370)
T PLN02695        258 EPVNIGSDEMVSMNEMAEIALSFENKKLPIKHIPG-------------------PEGV---------RGRNSDNTLIKEK  309 (370)
T ss_pred             CceEecCCCceeHHHHHHHHHHHhCCCCCceecCC-------------------CCCc---------cccccCHHHHHHh
Confidence            799996 5789999999999999987655433221                   0000         1123699999999


Q ss_pred             cCCCCC-CHHHHHHHHHHHHHhc
Q 019878          308 LGYNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       308 lG~~p~-~~~e~i~~~~~~~~~~  329 (334)
                      |||+|+ +++++|+++++|++++
T Consensus       310 lgw~p~~~l~e~i~~~~~~~~~~  332 (370)
T PLN02695        310 LGWAPTMRLKDGLRITYFWIKEQ  332 (370)
T ss_pred             cCCCCCCCHHHHHHHHHHHHHHH
Confidence            999999 9999999999999764

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=100.00  E-value=5.5e-45  Score=328.50  Aligned_cols=311  Identities=18%  Similarity=0.272  Sum_probs=236.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEE-EEcCCCCC--C---CCCCCCCeEEEEcCCCChhhHHHHhcC--CCEEEEe
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRA-LVRRTSDI--S---GLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHT   72 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~-~~r~~~~~--~---~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vih~   72 (334)
                      |+|||||||||||+++++.|+++|+++++ ++|.....  .   .+....+++++.+|++|.+.+.+++++  +|+|||+
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~   81 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHL   81 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEEC
Confidence            47999999999999999999999987654 44432211  1   111112578899999999999999975  9999999


Q ss_pred             ccccCC--CCCCcccchhhhhHHHHHHHHHHHhc--------CCCcEEEEecccceeccCC--CccCCCCCccccccccC
Q 019878           73 AALVEP--WLPDPSRFFAVNVEGLKNVVQAAKET--------KTVEKIIYTSSFFALGSTD--GYIADENQVHEEKYFCT  140 (334)
Q Consensus        73 a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~--------~~~~~~v~~Ss~~v~~~~~--~~~~~e~~~~~~~~~~~  140 (334)
                      ||....  ...++..++++|+.++.+++++|.+.        .++++||++||.++||...  ..+.+|+.+..+   .+
T Consensus        82 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p---~s  158 (355)
T PRK10217         82 AAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAP---SS  158 (355)
T ss_pred             CcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCC---CC
Confidence            997543  23456789999999999999999863        2467999999999998543  234555544333   58


Q ss_pred             hHHHHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHH
Q 019878          141 QYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHI  219 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  219 (334)
                      .|+.||.++|.+++.+.+ ++++++++||+++|||+..+ ..++..++.+...+.++.+++++++.++|+|++|+++++.
T Consensus       159 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~-~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~  237 (355)
T PRK10217        159 PYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFP-EKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALY  237 (355)
T ss_pred             hhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCc-ccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHH
Confidence            899999999999999764 69999999999999998643 3466677777777777777899999999999999999999


Q ss_pred             HHhhcCCCCCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccce
Q 019878          220 AAMEKGRSGERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWA  298 (334)
Q Consensus       220 ~~~~~~~~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (334)
                      .+++....+++||++ ++.+|+.|+++.+.+.++...+..+.+.+....      .+. .....+.        ....+.
T Consensus       238 ~~~~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~~--------~~~~~~  302 (355)
T PRK10217        238 CVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVAHYRD------LIT-FVADRPG--------HDLRYA  302 (355)
T ss_pred             HHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhcccccccccccccccc------cce-ecCCCCC--------CCcccc
Confidence            999876678899996 678999999999999998654332221110000      000 0000010        012345


Q ss_pred             echHHHHHhcCCCCC-CHHHHHHHHHHHHHhcC
Q 019878          299 YSCVKAKTELGYNPR-SLKEGLQEVLPWLRSSG  330 (334)
Q Consensus       299 ~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~~  330 (334)
                      +|++|++++|||+|+ +++|+|+++++||+.+.
T Consensus       303 ~d~~k~~~~lg~~p~~~l~e~l~~~~~~~~~~~  335 (355)
T PRK10217        303 IDASKIARELGWLPQETFESGMRKTVQWYLANE  335 (355)
T ss_pred             cCHHHHHHhcCCCCcCcHHHHHHHHHHHHHhCH
Confidence            799999999999999 99999999999998753

>PLN02214 cinnamoyl-CoA reductase

Probab=100.00  E-value=1.7e-44  Score=322.53  Aligned_cols=297  Identities=27%  Similarity=0.395  Sum_probs=227.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC-----CCCC-CCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-----GLPS-EGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~-~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |+||||||+||||++|++.|+++|++|++++|+.+...     .+.. ..+++++.+|++|.+.+.++++++|+|||+|+
T Consensus        11 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~A~   90 (342)
T PLN02214         11 KTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFHTAS   90 (342)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEEecC
Confidence            47999999999999999999999999999999765321     1111 12588999999999999999999999999999


Q ss_pred             ccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEeccc-ceeccCCC---ccCCCCCccc---cccccChHHHHHH
Q 019878           75 LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF-FALGSTDG---YIADENQVHE---EKYFCTQYERSKA  147 (334)
Q Consensus        75 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~-~v~~~~~~---~~~~e~~~~~---~~~~~~~Y~~sK~  147 (334)
                      ...   .++...+++|+.++.+++++|++. +++|||++||. .+||....   ...+|+++.+   +..+.+.|+.+|.
T Consensus        91 ~~~---~~~~~~~~~nv~gt~~ll~aa~~~-~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~  166 (342)
T PLN02214         91 PVT---DDPEQMVEPAVNGAKFVINAAAEA-KVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKM  166 (342)
T ss_pred             CCC---CCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHH
Confidence            642   456778999999999999999997 68999999996 58875332   2355654321   2224578999999


Q ss_pred             HHHHHHHHHhh-cCCCEEEEecCceecCCCCCch-hHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcC
Q 019878          148 VADKIALQAAS-EGLPIVPVYPGVIYGPGKLTTG-NLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG  225 (334)
Q Consensus       148 ~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~  225 (334)
                      ++|+.++.+.+ +|++++++||++||||+..... ..+.. +...+.+.... .  +++.++|+|++|+|++++.+++++
T Consensus       167 ~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~-~~~~~~g~~~~-~--~~~~~~~i~V~Dva~a~~~al~~~  242 (342)
T PLN02214        167 VAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYH-VLKYLTGSAKT-Y--ANLTQAYVDVRDVALAHVLVYEAP  242 (342)
T ss_pred             HHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHH-HHHHHcCCccc-C--CCCCcCeeEHHHHHHHHHHHHhCc
Confidence            99999999864 6999999999999999864321 12222 23444555442 2  356789999999999999999987


Q ss_pred             CCCCeEEecCCCCCHHHHHHHHHHHhCC-CCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHH
Q 019878          226 RSGERYLLTGENASFMQIFDMAAVITGT-SRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKA  304 (334)
Q Consensus       226 ~~g~~~~i~g~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~  304 (334)
                      ..++.||++++..++.|+++.+.+.++. +.+....+                  +..+         ....+.+|++|+
T Consensus       243 ~~~g~yn~~~~~~~~~el~~~i~~~~~~~~~~~~~~~------------------~~~~---------~~~~~~~d~~k~  295 (342)
T PLN02214        243 SASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKD------------------EKNP---------RAKPYKFTNQKI  295 (342)
T ss_pred             ccCCcEEEecCCCCHHHHHHHHHHHCCCCCCCCCCcc------------------ccCC---------CCCccccCcHHH
Confidence            6667899987779999999999998753 21111000                  0000         012334799999


Q ss_pred             HHhcCCCCCCHHHHHHHHHHHHHhcCCCC
Q 019878          305 KTELGYNPRSLKEGLQEVLPWLRSSGMIK  333 (334)
Q Consensus       305 ~~~lG~~p~~~~e~i~~~~~~~~~~~~~~  333 (334)
                      + +|||+|++++|+|+++++|+++.+.++
T Consensus       296 ~-~LG~~p~~lee~i~~~~~~~~~~~~~~  323 (342)
T PLN02214        296 K-DLGLEFTSTKQSLYDTVKSLQEKGHLA  323 (342)
T ss_pred             H-HcCCcccCHHHHHHHHHHHHHHcCCCC
Confidence            8 599999999999999999999988764

>PLN00198 anthocyanidin reductase; Provisional

Probab=100.00  E-value=3e-44  Score=321.40  Aligned_cols=303  Identities=26%  Similarity=0.385  Sum_probs=226.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC------CCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS------GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |+||||||+||||++|+++|+++|++|+++.|+.....      .+...++++++.+|++|.+.+.++++++|+|||+|+
T Consensus        10 ~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~   89 (338)
T PLN00198         10 KTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFHVAT   89 (338)
T ss_pred             CeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEEeCC
Confidence            57999999999999999999999999999988764321      122223588999999999999999999999999999


Q ss_pred             ccCCCCCCcc-cchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCC----CccCCCCCcc------ccccccChHH
Q 019878           75 LVEPWLPDPS-RFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD----GYIADENQVH------EEKYFCTQYE  143 (334)
Q Consensus        75 ~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~----~~~~~e~~~~------~~~~~~~~Y~  143 (334)
                      .......++. .++++|+.++.++++++.+..++++||++||.++|+...    ..+.+|+...      .+.+|.++|+
T Consensus        90 ~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~  169 (338)
T PLN00198         90 PVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYP  169 (338)
T ss_pred             CCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCccchhH
Confidence            6543323333 467899999999999998875688999999999998532    2233443211      1223467899


Q ss_pred             HHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCc-hhHHHHHHHHHHcCCCCcccc-CCCC----ceeeeeHHHHHH
Q 019878          144 RSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTT-GNLVAKLMIERFNGRLPGYIG-YGND----RFSFCHVDDVVD  216 (334)
Q Consensus       144 ~sK~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~i~v~D~a~  216 (334)
                      .||.++|.+++.+.+ +|++++++||++||||+.... ...+ .++...+.+....+.+ .+.+    .++|+||+|+++
T Consensus       170 ~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~a~  248 (338)
T PLN00198        170 ASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSL-SLAMSLITGNEFLINGLKGMQMLSGSISITHVEDVCR  248 (338)
T ss_pred             HHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcH-HHHHHHHcCCccccccccccccccCCcceeEHHHHHH
Confidence            999999999999875 699999999999999975321 1222 2333455565554444 2222    479999999999


Q ss_pred             HHHHHhhcCCCCCeEEecCCCCCHHHHHHHHHHHhCC-CCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhc
Q 019878          217 GHIAAMEKGRSGERYLLTGENASFMQIFDMAAVITGT-SRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAH  295 (334)
Q Consensus       217 a~~~~~~~~~~g~~~~i~g~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (334)
                      +++.+++.+..++.|+.+++..++.|+++.+.+..+. +.+..     .               +..+.         ..
T Consensus       249 a~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~~~~~~~~~-----~---------------~~~~~---------~~  299 (338)
T PLN00198        249 AHIFLAEKESASGRYICCAANTSVPELAKFLIKRYPQYQVPTD-----F---------------GDFPS---------KA  299 (338)
T ss_pred             HHHHHhhCcCcCCcEEEecCCCCHHHHHHHHHHHCCCCCCCcc-----c---------------cccCC---------CC
Confidence            9999998865555787778889999999999987753 11110     0               00010         11


Q ss_pred             cceechHHHHHhcCCCCC-CHHHHHHHHHHHHHhcCCCCC
Q 019878          296 QWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSSGMIKY  334 (334)
Q Consensus       296 ~~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~~~~~~  334 (334)
                      ...+|++|+++ +||+|+ +++++|+++++|++++++++.
T Consensus       300 ~~~~~~~k~~~-~G~~p~~~l~~gi~~~~~~~~~~~~~~~  338 (338)
T PLN00198        300 KLIISSEKLIS-EGFSFEYGIEEIYDQTVEYFKAKGLLKA  338 (338)
T ss_pred             ccccChHHHHh-CCceecCcHHHHHHHHHHHHHHcCCCCC
Confidence            23479999987 699999 999999999999999998863

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=2.1e-44  Score=320.52  Aligned_cols=300  Identities=26%  Similarity=0.379  Sum_probs=227.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC------C-CCCCeEEEEcCCCChhhHHHHhcCCCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL------P-SEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~-~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a   73 (334)
                      |+|||||||||||++|+++|+++|++|++++|+.......      . ..++++++.+|+.|++.+..+++++|+|||+|
T Consensus         5 ~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A   84 (322)
T PLN02662          5 KVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFHTA   84 (322)
T ss_pred             CEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEEeC
Confidence            6899999999999999999999999999999976532110      0 11368999999999999999999999999999


Q ss_pred             cccCCCCCCcc-cchhhhhHHHHHHHHHHHhcCCCcEEEEecccc--eeccCC---CccCCCCCccccc---cccChHHH
Q 019878           74 ALVEPWLPDPS-RFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF--ALGSTD---GYIADENQVHEEK---YFCTQYER  144 (334)
Q Consensus        74 ~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~--v~~~~~---~~~~~e~~~~~~~---~~~~~Y~~  144 (334)
                      +.......++. .++++|+.++.+++++|++..+++|||++||.+  +|+...   ..+.+|+.+..+.   ...+.|+.
T Consensus        85 ~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~  164 (322)
T PLN02662         85 SPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYVL  164 (322)
T ss_pred             CcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchHHH
Confidence            97544334454 688999999999999999864688999999986  465321   2344555433221   11357999


Q ss_pred             HHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhh
Q 019878          145 SKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAME  223 (334)
Q Consensus       145 sK~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~  223 (334)
                      +|.++|++++.+.+ +|++++++||+++|||+.....+.....+.+.+.+...    .+.+.++|+|++|+|++++.+++
T Consensus       165 sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~i~v~Dva~a~~~~~~  240 (322)
T PLN02662        165 SKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQT----FPNASYRWVDVRDVANAHIQAFE  240 (322)
T ss_pred             HHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCcc----CCCCCcCeEEHHHHHHHHHHHhc
Confidence            99999999998764 69999999999999997543323344445555554332    23467999999999999999999


Q ss_pred             cCCCCCeEEecCCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHH
Q 019878          224 KGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVK  303 (334)
Q Consensus       224 ~~~~g~~~~i~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k  303 (334)
                      ++..++.||++|+.+|+.|+++.+.+..+..    .+|.+.              .+..+         ......+|++|
T Consensus       241 ~~~~~~~~~~~g~~~s~~e~~~~i~~~~~~~----~~~~~~--------------~~~~~---------~~~~~~~d~~k  293 (322)
T PLN02662        241 IPSASGRYCLVERVVHYSEVVKILHELYPTL----QLPEKC--------------ADDKP---------YVPTYQVSKEK  293 (322)
T ss_pred             CcCcCCcEEEeCCCCCHHHHHHHHHHHCCCC----CCCCCC--------------CCccc---------cccccccChHH
Confidence            8655567888888899999999999987632    111100              00000         01224579999


Q ss_pred             HHHhcCCCCCCHHHHHHHHHHHHHhcCCC
Q 019878          304 AKTELGYNPRSLKEGLQEVLPWLRSSGMI  332 (334)
Q Consensus       304 ~~~~lG~~p~~~~e~i~~~~~~~~~~~~~  332 (334)
                      +++ |||++++++++|+++++||++++++
T Consensus       294 ~~~-lg~~~~~~~~~l~~~~~~~~~~~~~  321 (322)
T PLN02662        294 AKS-LGIEFIPLEVSLKDTVESLKEKGFL  321 (322)
T ss_pred             HHH-hCCccccHHHHHHHHHHHHHHcCCC
Confidence            995 9999889999999999999999876

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=1.2e-44  Score=332.26  Aligned_cols=301  Identities=21%  Similarity=0.241  Sum_probs=228.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC-------CCCC---------------CCCCeEEEEcCCCChhh
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-------SGLP---------------SEGALELVYGDVTDYRS   58 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~~~~---------------~~~~v~~~~~Dl~d~~~   58 (334)
                      |+||||||+||||++|+++|+++|++|++++|.....       +.+.               ...+++++.+|++|.+.
T Consensus        48 k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d~~~  127 (442)
T PLN02572         48 KKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICDFEF  127 (442)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCCHHH
Confidence            6799999999999999999999999999987532110       0000               01258899999999999


Q ss_pred             HHHHhcC--CCEEEEeccccCC--CCCC---cccchhhhhHHHHHHHHHHHhcCCCc-EEEEecccceeccCCCccCCC-
Q 019878           59 LVDACFG--CHVIFHTAALVEP--WLPD---PSRFFAVNVEGLKNVVQAAKETKTVE-KIIYTSSFFALGSTDGYIADE-  129 (334)
Q Consensus        59 ~~~~~~~--~d~vih~a~~~~~--~~~~---~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~Ss~~v~~~~~~~~~~e-  129 (334)
                      +.+++++  +|+|||+|+....  ...+   ....+++|+.++.+++++|++. +++ +||++||..+||.... +.+| 
T Consensus       128 v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~-gv~~~~V~~SS~~vYG~~~~-~~~E~  205 (442)
T PLN02572        128 LSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF-APDCHLVKLGTMGEYGTPNI-DIEEG  205 (442)
T ss_pred             HHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh-CCCccEEEEecceecCCCCC-CCccc
Confidence            9999874  8999999976332  1222   2345789999999999999998 565 9999999999996432 1221 


Q ss_pred             ----------CCccccccccChHHHHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCc----------------hhH
Q 019878          130 ----------NQVHEEKYFCTQYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTT----------------GNL  182 (334)
Q Consensus       130 ----------~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~----------------~~~  182 (334)
                                ++...+..|.++|+.+|.++|.+++.+++ +|++++++||+++|||+....                ...
T Consensus       206 ~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~  285 (442)
T PLN02572        206 YITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGTA  285 (442)
T ss_pred             ccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchhhH
Confidence                      22112334568999999999999998875 699999999999999985321                245


Q ss_pred             HHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC-CC--CeEEecCCCCCHHHHHHHHHHH---hCCCCC
Q 019878          183 VAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR-SG--ERYLLTGENASFMQIFDMAAVI---TGTSRP  256 (334)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-~g--~~~~i~g~~~s~~e~~~~i~~~---~g~~~~  256 (334)
                      +..++.+...++.+.++|+|++.|+|+||+|++++++.++++.. .|  .+||++++.+|+.|+++.+.+.   +|.+.+
T Consensus       286 i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs~~~si~el~~~i~~~~~~~g~~~~  365 (442)
T PLN02572        286 LNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFTEQFSVNELAKLVTKAGEKLGLDVE  365 (442)
T ss_pred             HHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCCCceeHHHHHHHHHHHHHhhCCCCC
Confidence            56667777788877788999999999999999999999998653 34  5899977789999999999998   886654


Q ss_pred             cccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhcCCCCC----CHHHHHHHHHHHHHhc
Q 019878          257 RFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPR----SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~----~~~e~i~~~~~~~~~~  329 (334)
                      ....|.                    +..     ......+..|.+|+++ |||+|+    ++++++.+++.||+++
T Consensus       366 ~~~~p~--------------------~~~-----~~~~~~~~~d~~k~~~-LGw~p~~~~~~l~~~l~~~~~~~~~~  416 (442)
T PLN02572        366 VISVPN--------------------PRV-----EAEEHYYNAKHTKLCE-LGLEPHLLSDSLLDSLLNFAVKYKDR  416 (442)
T ss_pred             eeeCCC--------------------Ccc-----cccccccCccHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHHhh
Confidence            432221                    000     0001233468999985 999998    7999999999999754

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=2.4e-44  Score=322.54  Aligned_cols=310  Identities=19%  Similarity=0.172  Sum_probs=231.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC-----CCCCC------CCCeEEEEcCCCChhhHHHHhcC--CC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-----SGLPS------EGALELVYGDVTDYRSLVDACFG--CH   67 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~------~~~v~~~~~Dl~d~~~~~~~~~~--~d   67 (334)
                      |+|||||||||||++|++.|+++|++|++++|+....     ..+..      ..+++++.+|++|.+.+.+++++  +|
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d   80 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT   80 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence            6899999999999999999999999999999976421     11110      12589999999999999999985  79


Q ss_pred             EEEEeccccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCC---cEEEEecccceeccCCCccCCCCCccccccccChH
Q 019878           68 VIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTV---EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (334)
Q Consensus        68 ~vih~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y  142 (334)
                      +|||+|+....  +..++...+++|+.++.+++++|+++ ++   ++|||+||.++||.....+.+|+.+..|   .++|
T Consensus        81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~-~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p---~~~Y  156 (343)
T TIGR01472        81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTL-GLIKSVKFYQASTSELYGKVQEIPQNETTPFYP---RSPY  156 (343)
T ss_pred             EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHh-CCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCC---CChh
Confidence            99999997443  22345567788999999999999987 44   3899999999999765555666654433   5899


Q ss_pred             HHHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCC--chhHHHHHHHHHHcCCC-CccccCCCCceeeeeHHHHHHHH
Q 019878          143 ERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLT--TGNLVAKLMIERFNGRL-PGYIGYGNDRFSFCHVDDVVDGH  218 (334)
Q Consensus       143 ~~sK~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~D~a~a~  218 (334)
                      +.||.++|.+++.+.+ +|++++++|+.++|||+...  ....+..++.+...+.. ..++|+|++.++|+|++|+|+++
T Consensus       157 ~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~  236 (343)
T TIGR01472       157 AAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAM  236 (343)
T ss_pred             HHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHH
Confidence            9999999999999875 68999999999999997422  12334455555556653 34568899999999999999999


Q ss_pred             HHHhhcCCCCCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccc-------cHHHHHHHHHHHHHHHHHhCCCCCCCHHHH
Q 019878          219 IAAMEKGRSGERYLLT-GENASFMQIFDMAAVITGTSRPRFCI-------PLWLIEAYGWILVFFSRITGKLPLISYPTV  290 (334)
Q Consensus       219 ~~~~~~~~~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (334)
                      ..+++++. +++||++ |+.+|+.|+++.+.+.+|.+.+....       |.+.....        ...... ...+.. 
T Consensus       237 ~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~-~~~~~~-  305 (343)
T TIGR01472       237 WLMLQQDK-PDDYVIATGETHSVREFVEVSFEYIGKTLNWKDKGINEVGRCKETGKVH--------VEIDPR-YFRPTE-  305 (343)
T ss_pred             HHHHhcCC-CccEEecCCCceeHHHHHHHHHHHcCCCcccccccccccccccccCcee--------EEeCcc-ccCCCc-
Confidence            99998754 4589996 78899999999999999975432110       00000000        000000 000100 


Q ss_pred             HHhhccceechHHHHHhcCCCCC-CHHHHHHHHHHHHHh
Q 019878          291 HVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRS  328 (334)
Q Consensus       291 ~~~~~~~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~  328 (334)
                         ......|++|++++|||+|+ +++++|++++++|++
T Consensus       306 ---~~~~~~d~~k~~~~lgw~p~~~l~egi~~~~~~~~~  341 (343)
T TIGR01472       306 ---VDLLLGDATKAKEKLGWKPEVSFEKLVKEMVEEDLE  341 (343)
T ss_pred             ---cchhcCCHHHHHHhhCCCCCCCHHHHHHHHHHHHHh
Confidence               11224699999999999999 999999999999874

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=7.6e-44  Score=316.78  Aligned_cols=300  Identities=28%  Similarity=0.371  Sum_probs=226.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC---C----CCCCCeEEEEcCCCChhhHHHHhcCCCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG---L----PSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~----~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a   73 (334)
                      ++|||||||||||++++++|+++|++|+++.|+......   +    ....+++++.+|++|.+.+.++++++|+|||+|
T Consensus         6 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~A   85 (322)
T PLN02986          6 KLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFHTA   85 (322)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEEeC
Confidence            479999999999999999999999999999997654221   1    011368999999999999999999999999999


Q ss_pred             cccCCCCCCcc-cchhhhhHHHHHHHHHHHhcCCCcEEEEeccccee--ccCC---CccCCCCCccccc---cccChHHH
Q 019878           74 ALVEPWLPDPS-RFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL--GSTD---GYIADENQVHEEK---YFCTQYER  144 (334)
Q Consensus        74 ~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~--~~~~---~~~~~e~~~~~~~---~~~~~Y~~  144 (334)
                      +.......++. ..++.|+.++.+++++|++..+++|||++||.++|  +...   +...+|+.+..+.   .+.+.|+.
T Consensus        86 ~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~  165 (322)
T PLN02986         86 SPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPL  165 (322)
T ss_pred             CCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccchHH
Confidence            97544333443 46899999999999999986468999999998764  3321   2335555543221   23478999


Q ss_pred             HHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhh
Q 019878          145 SKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAME  223 (334)
Q Consensus       145 sK~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~  223 (334)
                      +|.++|..++++.+ +|++++++||+++|||+..+..+....++.....+...  +  +.+.++|+|++|+|++++.+++
T Consensus       166 sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~--~--~~~~~~~v~v~Dva~a~~~al~  241 (322)
T PLN02986        166 SKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL--F--NNRFYRFVDVRDVALAHIKALE  241 (322)
T ss_pred             HHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC--C--CCcCcceeEHHHHHHHHHHHhc
Confidence            99999999999875 69999999999999997543323333445555555542  2  3567899999999999999999


Q ss_pred             cCCCCCeEEecCCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHH
Q 019878          224 KGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVK  303 (334)
Q Consensus       224 ~~~~g~~~~i~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k  303 (334)
                      ++..++.||++|+.+|+.|+++.+.+..+. ..   ++.                 + .+..   .  .....+.+|++|
T Consensus       242 ~~~~~~~yni~~~~~s~~e~~~~i~~~~~~-~~---~~~-----------------~-~~~~---~--~~~~~~~~d~~~  294 (322)
T PLN02986        242 TPSANGRYIIDGPIMSVNDIIDILRELFPD-LC---IAD-----------------T-NEES---E--MNEMICKVCVEK  294 (322)
T ss_pred             CcccCCcEEEecCCCCHHHHHHHHHHHCCC-CC---CCC-----------------C-Cccc---c--ccccCCccCHHH
Confidence            876666999988889999999999998763 11   110                 0 0000   0  001112368999


Q ss_pred             HHHhcCCCCCCHHHHHHHHHHHHHhcCCC
Q 019878          304 AKTELGYNPRSLKEGLQEVLPWLRSSGMI  332 (334)
Q Consensus       304 ~~~~lG~~p~~~~e~i~~~~~~~~~~~~~  332 (334)
                      +++ |||+|++++|+|+++++|+++.|++
T Consensus       295 ~~~-lg~~~~~l~e~~~~~~~~~~~~~~~  322 (322)
T PLN02986        295 VKN-LGVEFTPMKSSLRDTILSLKEKCLL  322 (322)
T ss_pred             HHH-cCCcccCHHHHHHHHHHHHHHcCCC
Confidence            874 9999999999999999999998875

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=100.00  E-value=7.2e-44  Score=320.84  Aligned_cols=307  Identities=19%  Similarity=0.299  Sum_probs=233.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCe-EEEEEcCCC--C---CCCCCCCCCeEEEEcCCCChhhHHHHhcC--CCEEEEe
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHS-VRALVRRTS--D---ISGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHT   72 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~-V~~~~r~~~--~---~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vih~   72 (334)
                      |||||||||||||++|++.|+++|++ |+++++...  .   ...+....+++++.+|++|.+++.+++++  +|+|||+
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL   80 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence            89999999999999999999999976 555555321  1   11111113578899999999999999874  8999999


Q ss_pred             ccccCC--CCCCcccchhhhhHHHHHHHHHHHhc--------CCCcEEEEecccceeccCCC----------ccCCCCCc
Q 019878           73 AALVEP--WLPDPSRFFAVNVEGLKNVVQAAKET--------KTVEKIIYTSSFFALGSTDG----------YIADENQV  132 (334)
Q Consensus        73 a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~--------~~~~~~v~~Ss~~v~~~~~~----------~~~~e~~~  132 (334)
                      |+....  ...+++.++++|+.++.+++++|++.        .++++||++||.++|+....          .+.+|+.+
T Consensus        81 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~~  160 (352)
T PRK10084         81 AAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTA  160 (352)
T ss_pred             CcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccCC
Confidence            997432  33456789999999999999999874        24679999999999986321          12344433


Q ss_pred             cccccccChHHHHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeH
Q 019878          133 HEEKYFCTQYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHV  211 (334)
Q Consensus       133 ~~~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  211 (334)
                      .   .|.+.|+.+|.++|.+++.+.+ +|++++++|++++|||+... .+++..++..+..+....+++++++.++|+|+
T Consensus       161 ~---~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v  236 (352)
T PRK10084        161 Y---APSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFP-EKLIPLVILNALEGKPLPIYGKGDQIRDWLYV  236 (352)
T ss_pred             C---CCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCc-cchHHHHHHHHhcCCCeEEeCCCCeEEeeEEH
Confidence            3   3458899999999999998764 69999999999999998632 34566677777777776778889999999999


Q ss_pred             HHHHHHHHHHhhcCCCCCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHH
Q 019878          212 DDVVDGHIAAMEKGRSGERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTV  290 (334)
Q Consensus       212 ~D~a~a~~~~~~~~~~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (334)
                      +|+++++..+++++..+++||++ ++..|+.|+++.+++.+|...|.. .+...         .+. .....+.      
T Consensus       237 ~D~a~a~~~~l~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~~-~~~~~---------~~~-~~~~~~~------  299 (352)
T PRK10084        237 EDHARALYKVVTEGKAGETYNIGGHNEKKNLDVVLTICDLLDEIVPKA-TSYRE---------QIT-YVADRPG------  299 (352)
T ss_pred             HHHHHHHHHHHhcCCCCceEEeCCCCcCcHHHHHHHHHHHhccccccc-cchhh---------hcc-ccccCCC------
Confidence            99999999999876668899997 577999999999999998643321 11100         000 0000010      


Q ss_pred             HHhhccceechHHHHHhcCCCCC-CHHHHHHHHHHHHHhcC
Q 019878          291 HVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSSG  330 (334)
Q Consensus       291 ~~~~~~~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~~  330 (334)
                        ....+.+|++|++++|||+|+ +++++|+++++|+.++.
T Consensus       300 --~~~~~~~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~~  338 (352)
T PRK10084        300 --HDRRYAIDASKISRELGWKPQETFESGIRKTVEWYLANT  338 (352)
T ss_pred             --CCceeeeCHHHHHHHcCCCCcCCHHHHHHHHHHHHHhCH
Confidence              012345799999999999999 99999999999998753

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=1.8e-43  Score=314.77  Aligned_cols=301  Identities=23%  Similarity=0.309  Sum_probs=229.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC-------CCCCCeEEEEcCCCChhhHHHHhcCCCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-------PSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a   73 (334)
                      |+||||||+||||++|++.|+++|++|++++|+.......       ....+++++.+|++|.+.+.++++++|+|||+|
T Consensus         6 k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~A   85 (325)
T PLN02989          6 KVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFHTA   85 (325)
T ss_pred             CEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEEeC
Confidence            5799999999999999999999999999998886543211       011368899999999999999999999999999


Q ss_pred             cccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCC-----CccCCCCCccccc---cccChHH
Q 019878           74 ALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD-----GYIADENQVHEEK---YFCTQYE  143 (334)
Q Consensus        74 ~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~-----~~~~~e~~~~~~~---~~~~~Y~  143 (334)
                      |....  ...++...+++|+.++.+++++|.+..++++||++||..+|+...     ..+.+|+.+..|.   .+.+.|+
T Consensus        86 ~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~  165 (325)
T PLN02989         86 SPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYV  165 (325)
T ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccchH
Confidence            96432  223445678999999999999999864578999999998876432     2345666554332   1246799


Q ss_pred             HHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHh
Q 019878          144 RSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAM  222 (334)
Q Consensus       144 ~sK~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~  222 (334)
                      .+|.++|+++..+.+ +|++++++||+++|||+..+..+++..++...+.++.+.  +  .+.++|+|++|+|++++.++
T Consensus       166 ~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~--~--~~~r~~i~v~Dva~a~~~~l  241 (325)
T PLN02989        166 LSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPF--N--TTHHRFVDVRDVALAHVKAL  241 (325)
T ss_pred             HHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCC--C--CcCcCeeEHHHHHHHHHHHh
Confidence            999999999998775 599999999999999986543344555566666665542  2  35689999999999999999


Q ss_pred             hcCCCCCeEEecCCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechH
Q 019878          223 EKGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCV  302 (334)
Q Consensus       223 ~~~~~g~~~~i~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  302 (334)
                      +++..+++||++|+.+|+.|+++++.+..+.. .....+                  +..+       .........|++
T Consensus       242 ~~~~~~~~~ni~~~~~s~~ei~~~i~~~~~~~-~~~~~~------------------~~~~-------~~~~~~~~~~~~  295 (325)
T PLN02989        242 ETPSANGRYIIDGPVVTIKDIENVLREFFPDL-CIADRN------------------EDIT-------ELNSVTFNVCLD  295 (325)
T ss_pred             cCcccCceEEEecCCCCHHHHHHHHHHHCCCC-CCCCCC------------------CCcc-------cccccCcCCCHH
Confidence            87665668999888899999999999988632 110000                  0000       000123356899


Q ss_pred             HHHHhcCCCCC-CHHHHHHHHHHHHHhcCCC
Q 019878          303 KAKTELGYNPR-SLKEGLQEVLPWLRSSGMI  332 (334)
Q Consensus       303 k~~~~lG~~p~-~~~e~i~~~~~~~~~~~~~  332 (334)
                      |+++ |||+|+ +++++|+++++|+++.+.+
T Consensus       296 k~~~-lg~~p~~~l~~gi~~~~~~~~~~~~~  325 (325)
T PLN02989        296 KVKS-LGIIEFTPTETSLRDTVLSLKEKCLV  325 (325)
T ss_pred             HHHH-cCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence            9885 999999 9999999999999987753

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=3.9e-43  Score=314.43  Aligned_cols=298  Identities=18%  Similarity=0.180  Sum_probs=229.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC--CCCC--------CCCCeEEEEcCCCChhhHHHHhcC--CCE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI--SGLP--------SEGALELVYGDVTDYRSLVDACFG--CHV   68 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~--------~~~~v~~~~~Dl~d~~~~~~~~~~--~d~   68 (334)
                      |+||||||+||||++|++.|+++|++|++++|++...  ..+.        ...+++++.+|++|.+.+.+++++  +|+
T Consensus         7 ~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   86 (340)
T PLN02653          7 KVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKPDE   86 (340)
T ss_pred             CEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCCCE
Confidence            5799999999999999999999999999999875421  1111        112588999999999999988874  799


Q ss_pred             EEEeccccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCCc-----EEEEecccceeccCCCccCCCCCccccccccCh
Q 019878           69 IFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVE-----KIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (334)
Q Consensus        69 vih~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  141 (334)
                      |||+|+....  ...++...+++|+.++.+++++|++. +++     +||++||.++||.... +.+|+.+..   +.+.
T Consensus        87 Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~~~~~---p~~~  161 (340)
T PLN02653         87 VYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLH-GQETGRQIKYYQAGSSEMYGSTPP-PQSETTPFH---PRSP  161 (340)
T ss_pred             EEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHh-ccccccceeEEEeccHHHhCCCCC-CCCCCCCCC---CCCh
Confidence            9999997433  23456677899999999999999988 454     8999999999997654 555655443   3589


Q ss_pred             HHHHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCc--hhHHHHHHHHHHcCCCCc-cccCCCCceeeeeHHHHHHH
Q 019878          142 YERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTT--GNLVAKLMIERFNGRLPG-YIGYGNDRFSFCHVDDVVDG  217 (334)
Q Consensus       142 Y~~sK~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~D~a~a  217 (334)
                      |+.||.++|.+++.+.+ ++++++..|+.++|||+....  ...+..++.+...+.... +.|++++.|+|+|++|+|++
T Consensus       162 Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a  241 (340)
T PLN02653        162 YAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEA  241 (340)
T ss_pred             hHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHH
Confidence            99999999999998874 689999999999999964321  223334444455565443 45889999999999999999


Q ss_pred             HHHHhhcCCCCCeEEec-CCCCCHHHHHHHHHHHhCCCCCc-ccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhc
Q 019878          218 HIAAMEKGRSGERYLLT-GENASFMQIFDMAAVITGTSRPR-FCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAH  295 (334)
Q Consensus       218 ~~~~~~~~~~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (334)
                      ++.++++.. ++.||++ |+.+|+.|+++.+.+.+|.+.+. ..+.                   . ....+..    ..
T Consensus       242 ~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~-------------------~-~~~~~~~----~~  296 (340)
T PLN02653        242 MWLMLQQEK-PDDYVVATEESHTVEEFLEEAFGYVGLNWKDHVEID-------------------P-RYFRPAE----VD  296 (340)
T ss_pred             HHHHHhcCC-CCcEEecCCCceeHHHHHHHHHHHcCCCCCcceeeC-------------------c-ccCCccc----cc
Confidence            999998753 5689995 78899999999999999864211 1110                   0 0001110    11


Q ss_pred             cceechHHHHHhcCCCCC-CHHHHHHHHHHHHHh
Q 019878          296 QWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRS  328 (334)
Q Consensus       296 ~~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~  328 (334)
                      ...+|++|++++|||+|+ +++++|+++++|++.
T Consensus       297 ~~~~d~~k~~~~lgw~p~~~l~~gi~~~~~~~~~  330 (340)
T PLN02653        297 NLKGDASKAREVLGWKPKVGFEQLVKMMVDEDLE  330 (340)
T ss_pred             cccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence            234699999999999999 999999999999874

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=3.8e-43  Score=315.89  Aligned_cols=305  Identities=22%  Similarity=0.317  Sum_probs=221.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~   76 (334)
                      |+||||||+||||++++++|+++|++|++++|+..+...    +....+++++.+|+.|.+.+.++++++|+|||+|+..
T Consensus        11 ~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A~~~   90 (353)
T PLN02896         11 GTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVAASM   90 (353)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECCccc
Confidence            789999999999999999999999999999987643221    1112368899999999999999999999999999975


Q ss_pred             CCC----CCCcccc-----hhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCC-----ccCCCCCcccc------c
Q 019878           77 EPW----LPDPSRF-----FAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG-----YIADENQVHEE------K  136 (334)
Q Consensus        77 ~~~----~~~~~~~-----~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~-----~~~~e~~~~~~------~  136 (334)
                      ...    ..++..+     ++.|+.++.+++++|++.+++++||++||.++||....     .+.+|+...+.      .
T Consensus        91 ~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~~~~  170 (353)
T PLN02896         91 EFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWNTK  170 (353)
T ss_pred             cCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHhhccC
Confidence            422    1234333     34556999999999998755789999999999985321     23455432211      1


Q ss_pred             cccChHHHHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCc-hhHHHHHHHHHHcCCCCc--cccC---CCCceeee
Q 019878          137 YFCTQYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTT-GNLVAKLMIERFNGRLPG--YIGY---GNDRFSFC  209 (334)
Q Consensus       137 ~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~i  209 (334)
                      .+.++|+.||.++|+++..+.+ +|++++++||+++|||+.... ...+..+ .....+....  ..+.   ....++|+
T Consensus       171 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~dfi  249 (353)
T PLN02896        171 ASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVL-LSPITGDSKLFSILSAVNSRMGSIALV  249 (353)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHH-HHHhcCCccccccccccccccCceeEE
Confidence            2346899999999999999875 699999999999999976422 1222222 2222343221  1111   11246999


Q ss_pred             eHHHHHHHHHHHhhcCCCCCeEEecCCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHH
Q 019878          210 HVDDVVDGHIAAMEKGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPT  289 (334)
Q Consensus       210 ~v~D~a~a~~~~~~~~~~g~~~~i~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (334)
                      |++|+|++++.+++.+..+++|+++++..++.|+++.+.+..+.........                  ...  .    
T Consensus       250 ~v~Dva~a~~~~l~~~~~~~~~~~~~~~~s~~el~~~i~~~~~~~~~~~~~~------------------~~~--~----  305 (353)
T PLN02896        250 HIEDICDAHIFLMEQTKAEGRYICCVDSYDMSELINHLSKEYPCSNIQVRLD------------------EEK--R----  305 (353)
T ss_pred             eHHHHHHHHHHHHhCCCcCccEEecCCCCCHHHHHHHHHHhCCCCCcccccc------------------ccc--c----
Confidence            9999999999999876555678878888999999999999886321111100                  000  0    


Q ss_pred             HHHhhccceechHHHHHhcCCCCC-CHHHHHHHHHHHHHhcCCCCC
Q 019878          290 VHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSSGMIKY  334 (334)
Q Consensus       290 ~~~~~~~~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~~~~~~  334 (334)
                         ......+|+++++ +|||+|+ +++++|+++++|+++++.++|
T Consensus       306 ---~~~~~~~~~~~~~-~lGw~p~~~l~~~i~~~~~~~~~~~~~~~  347 (353)
T PLN02896        306 ---GSIPSEISSKKLR-DLGFEYKYGIEEIIDQTIDCCVDHGFLPQ  347 (353)
T ss_pred             ---CccccccCHHHHH-HcCCCccCCHHHHHHHHHHHHHHCCCCCc
Confidence               0011235888887 5999999 999999999999999988865

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=100.00  E-value=3.1e-43  Score=315.99  Aligned_cols=301  Identities=22%  Similarity=0.254  Sum_probs=230.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CCCCCeEEEEcCCCChhhHHHHhcC--CCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vih~a~   74 (334)
                      |+||||||+||||+++++.|+++|++|++++|+.......    ....+++++.+|++|.+.+.+++++  +|+|||+|+
T Consensus         5 k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~A~   84 (349)
T TIGR02622         5 KKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHLAA   84 (349)
T ss_pred             CEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEECCc
Confidence            6799999999999999999999999999999886543211    1112577899999999999998875  799999999


Q ss_pred             ccC--CCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCC-ccCCCCCccccccccChHHHHHHHHHH
Q 019878           75 LVE--PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG-YIADENQVHEEKYFCTQYERSKAVADK  151 (334)
Q Consensus        75 ~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~-~~~~e~~~~~~~~~~~~Y~~sK~~~E~  151 (334)
                      ...  ....++...+++|+.++.+++++|++.+.++++|++||..+|+.... .+.+|+.+..   +.++|+.+|.++|.
T Consensus        85 ~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~---p~~~Y~~sK~~~e~  161 (349)
T TIGR02622        85 QPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLG---GHDPYSSSKACAEL  161 (349)
T ss_pred             ccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCC---CCCcchhHHHHHHH
Confidence            632  23346677889999999999999988743789999999999986532 2344444333   35889999999999


Q ss_pred             HHHHHhh--------cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhh
Q 019878          152 IALQAAS--------EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAME  223 (334)
Q Consensus       152 ~~~~~~~--------~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~  223 (334)
                      +++.+.+        +|++++++||+++|||++....++++.++.....+... ..+++++.|+|+|++|++++++.+++
T Consensus       162 ~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~-~~~~g~~~rd~i~v~D~a~a~~~~~~  240 (349)
T TIGR02622       162 VIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIV-IIRNPDATRPWQHVLEPLSGYLLLAE  240 (349)
T ss_pred             HHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCe-EECCCCcccceeeHHHHHHHHHHHHH
Confidence            9988753        28999999999999998644445677777777776655 45678999999999999999998876


Q ss_pred             cC-----CCCCeEEec-C--CCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhc
Q 019878          224 KG-----RSGERYLLT-G--ENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAH  295 (334)
Q Consensus       224 ~~-----~~g~~~~i~-g--~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (334)
                      +.     ..+++||++ |  +..++.|+++.+.+..+.....+..+                   ..+ ..+.    ...
T Consensus       241 ~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~~-------------------~~~-~~~~----~~~  296 (349)
T TIGR02622       241 KLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWEDD-------------------SDL-NHPH----EAR  296 (349)
T ss_pred             HHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceeec-------------------cCC-CCCc----ccc
Confidence            42     236799996 3  57999999999998765321111100                   000 0000    012


Q ss_pred             cceechHHHHHhcCCCCC-CHHHHHHHHHHHHHhc
Q 019878          296 QWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       296 ~~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~  329 (334)
                      ...+|++|++++|||+|+ +++++|+++++|+.++
T Consensus       297 ~~~~d~~k~~~~lgw~p~~~l~~gi~~~i~w~~~~  331 (349)
T TIGR02622       297 LLKLDSSKARTLLGWHPRWGLEEAVSRTVDWYKAW  331 (349)
T ss_pred             eeecCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence            235799999999999999 9999999999999764

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=100.00  E-value=2.8e-43  Score=340.86  Aligned_cols=300  Identities=22%  Similarity=0.351  Sum_probs=235.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC--CCeEEEEEcCCC--CCCCC---CCCCCeEEEEcCCCChhhHHHHh--cCCCEEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ--GHSVRALVRRTS--DISGL---PSEGALELVYGDVTDYRSLVDAC--FGCHVIFH   71 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~--g~~V~~~~r~~~--~~~~~---~~~~~v~~~~~Dl~d~~~~~~~~--~~~d~vih   71 (334)
                      |+|||||||||||++|+++|+++  +++|++++|...  ....+   ...++++++.+|++|.+.+..++  .++|+|||
T Consensus         7 ~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~ViH   86 (668)
T PLN02260          7 KNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTIMH   86 (668)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEEEE
Confidence            78999999999999999999987  689999987531  11111   11237899999999998887765  57999999


Q ss_pred             eccccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCcc---CCCCCccccccccChHHHHH
Q 019878           72 TAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYI---ADENQVHEEKYFCTQYERSK  146 (334)
Q Consensus        72 ~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~---~~e~~~~~~~~~~~~Y~~sK  146 (334)
                      +|+....  +..++..++++|+.++.+++++|++.+.+++|||+||..+||.....+   ..|+.+..   |.++|+.+|
T Consensus        87 lAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~---p~~~Y~~sK  163 (668)
T PLN02260         87 FAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLL---PTNPYSATK  163 (668)
T ss_pred             CCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCC---CCCCcHHHH
Confidence            9997543  223556788999999999999999985589999999999999765432   12333222   357899999


Q ss_pred             HHHHHHHHHHhh-cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcC
Q 019878          147 AVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG  225 (334)
Q Consensus       147 ~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~  225 (334)
                      .++|++++.+.+ ++++++++||++||||+... ..++..++..+..++...+++++++.++|+|++|+|+++..++++.
T Consensus       164 ~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~-~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~  242 (668)
T PLN02260        164 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP-EKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKG  242 (668)
T ss_pred             HHHHHHHHHHHHHcCCCEEEECcccccCcCCCc-ccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcC
Confidence            999999998764 69999999999999998643 3456666677777877778899999999999999999999999877


Q ss_pred             CCCCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHH
Q 019878          226 RSGERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKA  304 (334)
Q Consensus       226 ~~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~  304 (334)
                      ..+++||++ ++.+|+.|+++.+.+.+|.+.+.. +.                .....+ .       ....+.+|++|+
T Consensus       243 ~~~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~-i~----------------~~~~~p-~-------~~~~~~~d~~k~  297 (668)
T PLN02260        243 EVGHVYNIGTKKERRVIDVAKDICKLFGLDPEKS-IK----------------FVENRP-F-------NDQRYFLDDQKL  297 (668)
T ss_pred             CCCCEEEECCCCeeEHHHHHHHHHHHhCCCCcce-ee----------------ecCCCC-C-------CcceeecCHHHH
Confidence            678899996 578999999999999998754321 00                001111 1       112345799999


Q ss_pred             HHhcCCCCC-CHHHHHHHHHHHHHhcC
Q 019878          305 KTELGYNPR-SLKEGLQEVLPWLRSSG  330 (334)
Q Consensus       305 ~~~lG~~p~-~~~e~i~~~~~~~~~~~  330 (334)
                      + +|||+|+ +++|+++++++|++++.
T Consensus       298 ~-~lGw~p~~~~~egl~~~i~w~~~~~  323 (668)
T PLN02260        298 K-KLGWQERTSWEEGLKKTMEWYTSNP  323 (668)
T ss_pred             H-HcCCCCCCCHHHHHHHHHHHHHhCh
Confidence            7 5999999 99999999999998764

>PLN02650 dihydroflavonol-4-reductase

Probab=100.00  E-value=8.7e-43  Score=313.46  Aligned_cols=303  Identities=26%  Similarity=0.367  Sum_probs=221.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC------C-CCCCeEEEEcCCCChhhHHHHhcCCCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL------P-SEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~-~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a   73 (334)
                      ++|||||||||||++|+++|+++|++|++++|+......+      . ....++++.+|++|.+.+.++++++|+|||+|
T Consensus         6 k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH~A   85 (351)
T PLN02650          6 ETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFHVA   85 (351)
T ss_pred             CEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEEeC
Confidence            5799999999999999999999999999999986543211      0 01257899999999999999999999999999


Q ss_pred             cccCCCCCCc-ccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCC-Ccc-CCCCCcc------ccccccChHHH
Q 019878           74 ALVEPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD-GYI-ADENQVH------EEKYFCTQYER  144 (334)
Q Consensus        74 ~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~-~~~-~~e~~~~------~~~~~~~~Y~~  144 (334)
                      +.......++ ...+++|+.++.+++++|.+.+.+++|||+||.++|+... ..+ .+|+...      .+..+.++|+.
T Consensus        86 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~  165 (351)
T PLN02650         86 TPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFV  165 (351)
T ss_pred             CCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccchHHH
Confidence            8754332333 3688999999999999999974478999999998776432 222 3444321      11123468999


Q ss_pred             HHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCch-hHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHh
Q 019878          145 SKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTTG-NLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAM  222 (334)
Q Consensus       145 sK~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~  222 (334)
                      ||.++|.+++.+.+ +|++++++||+++|||+..... ..+...+ ....+... .++. .+.++|+|++|+|+++..++
T Consensus       166 sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~-~~~~~~~~-~~~~-~~~r~~v~V~Dva~a~~~~l  242 (351)
T PLN02650        166 SKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITAL-SLITGNEA-HYSI-IKQGQFVHLDDLCNAHIFLF  242 (351)
T ss_pred             HHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHH-HHhcCCcc-ccCc-CCCcceeeHHHHHHHHHHHh
Confidence            99999999999874 6999999999999999753211 1111111 12233322 2222 23579999999999999999


Q ss_pred             hcCCCCCeEEecCCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechH
Q 019878          223 EKGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCV  302 (334)
Q Consensus       223 ~~~~~g~~~~i~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  302 (334)
                      +++..++.|+++++.+|+.|+++.+.+..+.. +   +|..+               ...+    .    ......+|++
T Consensus       243 ~~~~~~~~~i~~~~~~s~~el~~~i~~~~~~~-~---~~~~~---------------~~~~----~----~~~~~~~d~~  295 (351)
T PLN02650        243 EHPAAEGRYICSSHDATIHDLAKMLREKYPEY-N---IPARF---------------PGID----E----DLKSVEFSSK  295 (351)
T ss_pred             cCcCcCceEEecCCCcCHHHHHHHHHHhCccc-C---CCCCC---------------CCcC----c----ccccccCChH
Confidence            87665567876788899999999999977521 1   11000               0000    0    0122346888


Q ss_pred             HHHHhcCCCCC-CHHHHHHHHHHHHHhcCCCCC
Q 019878          303 KAKTELGYNPR-SLKEGLQEVLPWLRSSGMIKY  334 (334)
Q Consensus       303 k~~~~lG~~p~-~~~e~i~~~~~~~~~~~~~~~  334 (334)
                      |++ +|||+|+ +++++|+++++|+++.+.+++
T Consensus       296 k~~-~lG~~p~~~l~egl~~~i~~~~~~~~~~~  327 (351)
T PLN02650        296 KLT-DLGFTFKYSLEDMFDGAIETCREKGLIPL  327 (351)
T ss_pred             HHH-HhCCCCCCCHHHHHHHHHHHHHHcCCCCc
Confidence            875 6999999 999999999999999988763

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=9.3e-43  Score=309.27  Aligned_cols=299  Identities=22%  Similarity=0.339  Sum_probs=236.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCC-----CCCCCCCCCCeEEEEcCCCChhhHHHHhcC--CCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTS-----DISGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~-----~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vih~   72 (334)
                      +|||||||||||++++++|+++|  ++|++++|...     ....+...++++++.+|+.|++++.+++++  +|+|||+
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~   80 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF   80 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence            69999999999999999999987  78998876321     111121223688999999999999999987  9999999


Q ss_pred             ccccC--CCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCc-cCCCCCccccccccChHHHHHHHH
Q 019878           73 AALVE--PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGY-IADENQVHEEKYFCTQYERSKAVA  149 (334)
Q Consensus        73 a~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~-~~~e~~~~~~~~~~~~Y~~sK~~~  149 (334)
                      |+...  .+..++..++++|+.++.+++++|.+.....++|++||..+||..... +..|+.+..+   .+.|+.+|..+
T Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~---~~~Y~~sK~~~  157 (317)
T TIGR01181        81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAP---SSPYSASKAAS  157 (317)
T ss_pred             ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCC---CCchHHHHHHH
Confidence            99743  234466778899999999999999986322389999999999975532 4555554433   47899999999


Q ss_pred             HHHHHHHhh-cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCCC
Q 019878          150 DKIALQAAS-EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSG  228 (334)
Q Consensus       150 E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g  228 (334)
                      |.+++.+.. .+++++++||+.+||++... .+++..++.....+..+.+++++++.++|+|++|+++++..++++...+
T Consensus       158 e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~~~~  236 (317)
T TIGR01181       158 DHLVRAYHRTYGLPALITRCSNNYGPYQFP-EKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGRVG  236 (317)
T ss_pred             HHHHHHHHHHhCCCeEEEEeccccCCCCCc-ccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCCCCC
Confidence            999998764 69999999999999997543 4567777777777877777888999999999999999999999877678


Q ss_pred             CeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHh
Q 019878          229 ERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTE  307 (334)
Q Consensus       229 ~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~  307 (334)
                      ++||++ ++.+++.|+++.+.+.+|.+.+.....                  ...+.        ....+.+|++|++++
T Consensus       237 ~~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~~~~------------------~~~~~--------~~~~~~~~~~k~~~~  290 (317)
T TIGR01181       237 ETYNIGGGNERTNLEVVETILELLGKDEDLITHV------------------EDRPG--------HDRRYAIDASKIKRE  290 (317)
T ss_pred             ceEEeCCCCceeHHHHHHHHHHHhCCCccccccc------------------CCCcc--------chhhhcCCHHHHHHH
Confidence            899996 578999999999999998754322110                  00000        011234799999999


Q ss_pred             cCCCCC-CHHHHHHHHHHHHHhcC
Q 019878          308 LGYNPR-SLKEGLQEVLPWLRSSG  330 (334)
Q Consensus       308 lG~~p~-~~~e~i~~~~~~~~~~~  330 (334)
                      |||+|+ ++++++.++++||++++
T Consensus       291 lG~~p~~~~~~~i~~~~~~~~~~~  314 (317)
T TIGR01181       291 LGWAPKYTFEEGLRKTVQWYLDNE  314 (317)
T ss_pred             hCCCCCCcHHHHHHHHHHHHHhcc
Confidence            999998 99999999999998865

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=100.00  E-value=5.7e-43  Score=307.19  Aligned_cols=282  Identities=16%  Similarity=0.135  Sum_probs=218.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc--CCCEEEEeccccCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVEP   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vih~a~~~~~   78 (334)
                      ||||||||+||||++|+++|+++| +|++++|...            .+.+|++|.+.+.++++  ++|+|||||+....
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~   67 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST------------DYCGDFSNPEGVAETVRKIRPDVIVNAAAHTAV   67 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc------------cccCCCCCHHHHHHHHHhcCCCEEEECCccCCc
Confidence            899999999999999999999999 7998888632            24589999999999887  48999999998543


Q ss_pred             --CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHH
Q 019878           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (334)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~  156 (334)
                        ++.+++..+.+|+.++.+++++|++. ++ +|||+||.+||+.....+.+|+++..|   .++|+.+|.++|++++.+
T Consensus        68 ~~~~~~~~~~~~~N~~~~~~l~~aa~~~-g~-~~v~~Ss~~Vy~~~~~~p~~E~~~~~P---~~~Yg~sK~~~E~~~~~~  142 (299)
T PRK09987         68 DKAESEPEFAQLLNATSVEAIAKAANEV-GA-WVVHYSTDYVFPGTGDIPWQETDATAP---LNVYGETKLAGEKALQEH  142 (299)
T ss_pred             chhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEccceEECCCCCCCcCCCCCCCC---CCHHHHHHHHHHHHHHHh
Confidence              44566777899999999999999998 44 899999999998776666777665443   588999999999999875


Q ss_pred             hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccC--CCCceeeeeHHHHHHHHHHHhhcCCCCCeEEec
Q 019878          157 ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGY--GNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLT  234 (334)
Q Consensus       157 ~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~a~a~~~~~~~~~~g~~~~i~  234 (334)
                      .   .+++++|++++|||+.   .+++..++.....++.+.++++  +.+.+++.+++|+++++..++..+..+++||++
T Consensus       143 ~---~~~~ilR~~~vyGp~~---~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~~giyni~  216 (299)
T PRK09987        143 C---AKHLIFRTSWVYAGKG---NNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPEVAGLYHLV  216 (299)
T ss_pred             C---CCEEEEecceecCCCC---CCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCCCCCeEEee
Confidence            4   3589999999999974   2456666666666777777776  666667777888899988887665445699996


Q ss_pred             -CCCCCHHHHHHHHHHHhC---CCCC---cccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHh
Q 019878          235 -GENASFMQIFDMAAVITG---TSRP---RFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTE  307 (334)
Q Consensus       235 -g~~~s~~e~~~~i~~~~g---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~  307 (334)
                       ++.+|+.|+++.+.+.++   .+.+   +.+.+...              .+. +.       ....+..+|++|+++.
T Consensus       217 ~~~~~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~--------------~~~-~~-------~rp~~~~ld~~k~~~~  274 (299)
T PRK09987        217 ASGTTTWHDYAALVFEEARKAGITLALNKLNAVPTSA--------------YPT-PA-------RRPHNSRLNTEKFQQN  274 (299)
T ss_pred             CCCCccHHHHHHHHHHHHHhcCCCcCcCeeeecchhh--------------cCC-CC-------CCCCcccCCHHHHHHH
Confidence             577999999999987643   3322   11211100              000 00       0123346799999999


Q ss_pred             cCCCCCCHHHHHHHHHHHHHh
Q 019878          308 LGYNPRSLKEGLQEVLPWLRS  328 (334)
Q Consensus       308 lG~~p~~~~e~i~~~~~~~~~  328 (334)
                      |||+|.+++++|+++++.+..
T Consensus       275 lg~~~~~~~~~l~~~~~~~~~  295 (299)
T PRK09987        275 FALVLPDWQVGVKRMLTELFT  295 (299)
T ss_pred             hCCCCccHHHHHHHHHHHHhh
Confidence            999988999999999987643

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=3.6e-42  Score=298.51  Aligned_cols=322  Identities=30%  Similarity=0.428  Sum_probs=270.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCCCCC-----CCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      ++|||||+||+|++|+++|++++  .+|++++..+.......     ....++++.+|+.|...+..++.++ .|+|+|+
T Consensus         6 ~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vvh~aa   84 (361)
T KOG1430|consen    6 SVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVVHCAA   84 (361)
T ss_pred             EEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEEEecc
Confidence            59999999999999999999988  89999998875321111     1347999999999999999999999 8888887


Q ss_pred             ccC--CCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCC-ccCCCCCccccccccChHHHHHHHHHH
Q 019878           75 LVE--PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG-YIADENQVHEEKYFCTQYERSKAVADK  151 (334)
Q Consensus        75 ~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~-~~~~e~~~~~~~~~~~~Y~~sK~~~E~  151 (334)
                      ...  ....+++..+++|+.||.+++++|.+. +++++||+||.+|..+... ...+|+.+.+ ..+.++|+.||+.+|+
T Consensus        85 ~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~-~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p-~~~~d~Y~~sKa~aE~  162 (361)
T KOG1430|consen   85 SPVPDFVENDRDLAMRVNVNGTLNVIEACKEL-GVKRLIYTSSAYVVFGGEPIINGDESLPYP-LKHIDPYGESKALAEK  162 (361)
T ss_pred             ccCccccccchhhheeecchhHHHHHHHHHHh-CCCEEEEecCceEEeCCeecccCCCCCCCc-cccccccchHHHHHHH
Confidence            632  344568899999999999999999999 8999999999999876665 4556666555 4455799999999999


Q ss_pred             HHHHHh-hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhc-----C
Q 019878          152 IALQAA-SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEK-----G  225 (334)
Q Consensus       152 ~~~~~~-~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~-----~  225 (334)
                      +++++. ..++.+++|||+.|||||+..   ..+.+...+..+......++++...|++++++++.+++.+...     +
T Consensus       163 ~Vl~an~~~~l~T~aLR~~~IYGpgd~~---~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~~  239 (361)
T KOG1430|consen  163 LVLEANGSDDLYTCALRPPGIYGPGDKR---LLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKSP  239 (361)
T ss_pred             HHHHhcCCCCeeEEEEccccccCCCCcc---ccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhcCC
Confidence            999987 467999999999999999754   4455566666788888888888999999999999999876432     2


Q ss_pred             -CCCCeEEec-CCCCCHHHHHHHHHHHhCCCCC-cccccHHHHHHHHHHHHHHHHHhC-CCCCCCHHHHHHhhccceech
Q 019878          226 -RSGERYLLT-GENASFMQIFDMAAVITGTSRP-RFCIPLWLIEAYGWILVFFSRITG-KLPLISYPTVHVLAHQWAYSC  301 (334)
Q Consensus       226 -~~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~  301 (334)
                       ..|++|+|+ |++....++...+.+.+|...+ .+..|.++...++.+.+++.+..+ ..|.+++...........+++
T Consensus       240 ~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~~~p~~l~~~~~~l~e~~~~~l~p~~p~lt~~~v~~~~~~~~f~~  319 (361)
T KOG1430|consen  240 SVNGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSIKLPLFLSYFLAYLLEIVYFLLRPYQPILTRFRVALLGVTRTFSI  319 (361)
T ss_pred             ccCceEEEEeCCCcchhhHHHHHHHHhcCCCCCceeecchHHHHHHHHHHHHHHHhccCCCCCcChhheeeeccccccCH
Confidence             369999997 5777777777799999999988 778999999999999999998887 677788888777777888999


Q ss_pred             HHHHHhcCCCCC-CHHHHHHHHHHHHHhc
Q 019878          302 VKAKTELGYNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       302 ~k~~~~lG~~p~-~~~e~i~~~~~~~~~~  329 (334)
                      .|++++||++|. ++++++++++.|+...
T Consensus       320 ~kA~~~lgY~P~~~~~e~~~~~~~~~~~~  348 (361)
T KOG1430|consen  320 EKAKRELGYKPLVSLEEAIQRTIHWVASE  348 (361)
T ss_pred             HHHHHhhCCCCcCCHHHHHHHHHHHHhhh
Confidence            999999999999 9999999999998664

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=100.00  E-value=3e-42  Score=304.73  Aligned_cols=288  Identities=22%  Similarity=0.269  Sum_probs=210.2

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChh---h-HHHHh-----cCCCEEEEec
Q 019878            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYR---S-LVDAC-----FGCHVIFHTA   73 (334)
Q Consensus         3 ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~---~-~~~~~-----~~~d~vih~a   73 (334)
                      |||||||||||++|+++|+++|++++++.|+......     ...+..+|+.|..   . +..++     .++|+|||+|
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A   76 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-----FVNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEG   76 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchH-----HHhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEECc
Confidence            8999999999999999999999987777665432211     1123445665543   3 23333     2689999999


Q ss_pred             cccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHH
Q 019878           74 ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIA  153 (334)
Q Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~  153 (334)
                      |.......++..+++.|+.++.+++++|++. ++ +||++||.++||.....+.+|+.+..|   .++|+.+|.++|+.+
T Consensus        77 ~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p---~~~Y~~sK~~~E~~~  151 (308)
T PRK11150         77 ACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATYGGRTDDFIEEREYEKP---LNVYGYSKFLFDEYV  151 (308)
T ss_pred             eecCCcCCChHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEcchHHhCcCCCCCCccCCCCCC---CCHHHHHHHHHHHHH
Confidence            8644322344567899999999999999997 55 799999999999765445556554333   488999999999999


Q ss_pred             HHHhh-cCCCEEEEecCceecCCCCCch---hHHHHHHHHHHcCCCCccc-cCCCCceeeeeHHHHHHHHHHHhhcCCCC
Q 019878          154 LQAAS-EGLPIVPVYPGVIYGPGKLTTG---NLVAKLMIERFNGRLPGYI-GYGNDRFSFCHVDDVVDGHIAAMEKGRSG  228 (334)
Q Consensus       154 ~~~~~-~g~~~~ilR~~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~D~a~a~~~~~~~~~~g  228 (334)
                      +.+.. ++++++++||+++|||+....+   .....+..+...+..+.++ ++++..|+|+|++|+|+++..++++.. +
T Consensus       152 ~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~~-~  230 (308)
T PRK11150        152 RQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWENGV-S  230 (308)
T ss_pred             HHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhcCC-C
Confidence            98764 6999999999999999864322   2233344556667655454 556778999999999999999988653 5


Q ss_pred             CeEEec-CCCCCHHHHHHHHHHHhCCC-CCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHH
Q 019878          229 ERYLLT-GENASFMQIFDMAAVITGTS-RPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKT  306 (334)
Q Consensus       229 ~~~~i~-g~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~  306 (334)
                      ++||++ ++.+|+.|+++.+.+..|.. ....+.|.                     ...    .........|++|+++
T Consensus       231 ~~yni~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~---------------------~~~----~~~~~~~~~d~~k~~~  285 (308)
T PRK11150        231 GIFNCGTGRAESFQAVADAVLAYHKKGEIEYIPFPD---------------------KLK----GRYQAFTQADLTKLRA  285 (308)
T ss_pred             CeEEcCCCCceeHHHHHHHHHHHhCCCcceeccCcc---------------------ccc----cccceecccCHHHHHh
Confidence            699996 67799999999999998752 11111110                     000    0011223479999995


Q ss_pred             hcCCCCC--CHHHHHHHHHHHHH
Q 019878          307 ELGYNPR--SLKEGLQEVLPWLR  327 (334)
Q Consensus       307 ~lG~~p~--~~~e~i~~~~~~~~  327 (334)
                       +||+|+  +++++|+++++|+.
T Consensus       286 -~g~~p~~~~~~~gl~~~~~~~~  307 (308)
T PRK11150        286 -AGYDKPFKTVAEGVAEYMAWLN  307 (308)
T ss_pred             -cCCCCCCCCHHHHHHHHHHHhh
Confidence             799975  99999999999984

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=100.00  E-value=1.1e-41  Score=289.59  Aligned_cols=303  Identities=32%  Similarity=0.456  Sum_probs=236.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC------CCCCC-CCeEEEEcCCCChhhHHHHhcCCCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS------GLPSE-GALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------~~~~~-~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a   73 (334)
                      |+|+||||+||||+++++.|+++||.|+++.|++.+..      .++.. .+.+.+.+||.|++++..+++++|.|+|+|
T Consensus         7 ~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH~A   86 (327)
T KOG1502|consen    7 KKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFHTA   86 (327)
T ss_pred             cEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEEeC
Confidence            57999999999999999999999999999999988632      22211 258999999999999999999999999999


Q ss_pred             cccCCCCCCcc-cchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccC-----CCccCCCCCcccccc---ccChHHH
Q 019878           74 ALVEPWLPDPS-RFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST-----DGYIADENQVHEEKY---FCTQYER  144 (334)
Q Consensus        74 ~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~-----~~~~~~e~~~~~~~~---~~~~Y~~  144 (334)
                      +.+.....+++ +..+.++.|+.|++++|++...|+|+|++||.++...+     .....+|+.+.++..   ....|..
T Consensus        87 sp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y~~  166 (327)
T KOG1502|consen   87 SPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWYAL  166 (327)
T ss_pred             ccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHHHH
Confidence            99877555555 79999999999999999999779999999998866533     123455555544321   1257999


Q ss_pred             HHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhh
Q 019878          145 SKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAME  223 (334)
Q Consensus       145 sK~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~  223 (334)
                      +|..+|+..+++.+ .|++.+.+-|+.|+||...+..+.....+...+.|......   +....|+||+|+|.|++.+++
T Consensus       167 sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~---n~~~~~VdVrDVA~AHv~a~E  243 (327)
T KOG1502|consen  167 SKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYP---NFWLAFVDVRDVALAHVLALE  243 (327)
T ss_pred             HHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCC---CCceeeEeHHHHHHHHHHHHc
Confidence            99999999999886 58999999999999998766555555666677777555333   233449999999999999999


Q ss_pred             cCCCCCeEEecCCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHH
Q 019878          224 KGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVK  303 (334)
Q Consensus       224 ~~~~g~~~~i~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k  303 (334)
                      ++..++.|.++++..++.|+++.+.+.....    .+|..               .+.       ..........++++|
T Consensus       244 ~~~a~GRyic~~~~~~~~ei~~~l~~~~P~~----~ip~~---------------~~~-------~~~~~~~~~~~~~~k  297 (327)
T KOG1502|consen  244 KPSAKGRYICVGEVVSIKEIADILRELFPDY----PIPKK---------------NAE-------EHEGFLTSFKVSSEK  297 (327)
T ss_pred             CcccCceEEEecCcccHHHHHHHHHHhCCCC----CCCCC---------------CCc-------cccccccccccccHH
Confidence            9999999999998888999999888765322    22210               000       000001112368999


Q ss_pred             HHHhcCCCCCCHHHHHHHHHHHHHhcCCC
Q 019878          304 AKTELGYNPRSLKEGLQEVLPWLRSSGMI  332 (334)
Q Consensus       304 ~~~~lG~~p~~~~e~i~~~~~~~~~~~~~  332 (334)
                      +++..|++.++++|.+.++++++++.+.+
T Consensus       298 ~k~lg~~~~~~l~e~~~dt~~sl~~~~~l  326 (327)
T KOG1502|consen  298 LKSLGGFKFRPLEETLSDTVESLREKGLL  326 (327)
T ss_pred             HHhcccceecChHHHHHHHHHHHHHhcCC
Confidence            99755588999999999999999998876

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.3e-41  Score=301.51  Aligned_cols=299  Identities=29%  Similarity=0.436  Sum_probs=238.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCC-CEEEEeccccCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGC-HVIFHTAALVEPW   79 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~-d~vih~a~~~~~~   79 (334)
                      |+|||||||||||++|+++|+++|++|++++|.........  ..+.++.+|++|.+...+..+.. |+|||+|+.....
T Consensus         1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~~~   78 (314)
T COG0451           1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL--SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSVP   78 (314)
T ss_pred             CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc--cccceeeecccchHHHHHHHhcCCCEEEEccccCchh
Confidence            78999999999999999999999999999999887655443  36899999999998888888887 9999999986542


Q ss_pred             CC---CcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccC-CCccCCCCCccccccccChHHHHHHHHHHHHHH
Q 019878           80 LP---DPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST-DGYIADENQVHEEKYFCTQYERSKAVADKIALQ  155 (334)
Q Consensus        80 ~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~-~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~  155 (334)
                      ..   ++..++..|+.++.+++++|++. ++++||+.||.++|+.. ...+.+|+.  .+..|.++|+.+|.++|+.+..
T Consensus        79 ~~~~~~~~~~~~~nv~gt~~ll~aa~~~-~~~~~v~~ss~~~~~~~~~~~~~~E~~--~~~~p~~~Yg~sK~~~E~~~~~  155 (314)
T COG0451          79 DSNASDPAEFLDVNVDGTLNLLEAARAA-GVKRFVFASSVSVVYGDPPPLPIDEDL--GPPRPLNPYGVSKLAAEQLLRA  155 (314)
T ss_pred             hhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeCCCceECCCCCCCCccccc--CCCCCCCHHHHHHHHHHHHHHH
Confidence            22   34468999999999999999995 79999999998888765 333556663  2222345899999999999999


Q ss_pred             Hhh-cCCCEEEEecCceecCCCCCch--hHHHHHHHHHHcCCC-CccccCCCCceeeeeHHHHHHHHHHHhhcCCCCCeE
Q 019878          156 AAS-EGLPIVPVYPGVIYGPGKLTTG--NLVAKLMIERFNGRL-PGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERY  231 (334)
Q Consensus       156 ~~~-~g~~~~ilR~~~v~G~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g~~~  231 (334)
                      +.. +|++++++||+++|||++....  .++..++.+...+.+ ....+++.+.++++|++|+++++..+++++..+ +|
T Consensus       156 ~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~-~~  234 (314)
T COG0451         156 YARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDGG-VF  234 (314)
T ss_pred             HHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCCc-EE
Confidence            875 6899999999999999976431  233444444555665 555567788899999999999999999998777 99


Q ss_pred             EecC-C-CCCHHHHHHHHHHHhCCCCCc-ccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhc
Q 019878          232 LLTG-E-NASFMQIFDMAAVITGTSRPR-FCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTEL  308 (334)
Q Consensus       232 ~i~g-~-~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l  308 (334)
                      |+++ + ..++.|+++.+.+.+|.+.+. ...+.                         ...........+|.+|.+++|
T Consensus       235 ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~l  289 (314)
T COG0451         235 NIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPL-------------------------GRRGDLREGKLLDISKARAAL  289 (314)
T ss_pred             EeCCCCCcEEHHHHHHHHHHHhCCCCcceeecCC-------------------------CCCCcccccccCCHHHHHHHh
Confidence            9974 4 799999999999999988663 11110                         000111233457999999999


Q ss_pred             CCCCC-CHHHHHHHHHHHHHhcC
Q 019878          309 GYNPR-SLKEGLQEVLPWLRSSG  330 (334)
Q Consensus       309 G~~p~-~~~e~i~~~~~~~~~~~  330 (334)
                      ||+|+ ++++++.++++|+....
T Consensus       290 g~~p~~~~~~~i~~~~~~~~~~~  312 (314)
T COG0451         290 GWEPKVSLEEGLADTLEWLLKKL  312 (314)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHhh
Confidence            99998 99999999999998754

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=100.00  E-value=1.1e-41  Score=305.17  Aligned_cols=299  Identities=23%  Similarity=0.304  Sum_probs=226.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC-C---C--CCCCeEEEEcCCCChhhHHHHhc--CCCEEEEe
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-L---P--SEGALELVYGDVTDYRSLVDACF--GCHVIFHT   72 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~---~--~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vih~   72 (334)
                      |||||||||||||++|++.|+++|++|++++|....... +   .  ...++.++.+|++|.+.+.+++.  ++|+|||+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~   80 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF   80 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence            899999999999999999999999999999875332111 0   0  01246789999999999988886  59999999


Q ss_pred             ccccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHH
Q 019878           73 AALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD  150 (334)
Q Consensus        73 a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E  150 (334)
                      |+....  ...++...+++|+.++.+++++|++. ++++||++||.++||.....+.+|+.+..  .+.+.|+.+|.++|
T Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~--~p~~~Y~~sK~~~E  157 (338)
T PRK10675         81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNLIFSSSATVYGDQPKIPYVESFPTG--TPQSPYGKSKLMVE  157 (338)
T ss_pred             CccccccchhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHhhCCCCCCccccccCCC--CCCChhHHHHHHHH
Confidence            987432  22345678899999999999999997 78999999999999876555566665431  12588999999999


Q ss_pred             HHHHHHhh--cCCCEEEEecCceecCCCC--------CchhHHHHHHHHHHcCCC--Ccccc------CCCCceeeeeHH
Q 019878          151 KIALQAAS--EGLPIVPVYPGVIYGPGKL--------TTGNLVAKLMIERFNGRL--PGYIG------YGNDRFSFCHVD  212 (334)
Q Consensus       151 ~~~~~~~~--~g~~~~ilR~~~v~G~~~~--------~~~~~~~~~~~~~~~~~~--~~~~~------~~~~~~~~i~v~  212 (334)
                      ++++.+.+  .+++++++|++++||+...        .....+..++.+...+..  +.+++      ++++.++|+|++
T Consensus       158 ~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~  237 (338)
T PRK10675        158 QILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVM  237 (338)
T ss_pred             HHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHH
Confidence            99998864  3799999999999997321        101112334444544432  22332      578899999999


Q ss_pred             HHHHHHHHHhhcC---CCCCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHH
Q 019878          213 DVVDGHIAAMEKG---RSGERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYP  288 (334)
Q Consensus       213 D~a~a~~~~~~~~---~~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (334)
                      |+|+++..+++..   ..+++||++ ++.+|+.|+++.+.+..|.+.+....|.                   .+    .
T Consensus       238 D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-------------------~~----~  294 (338)
T PRK10675        238 DLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNYHFAPR-------------------RE----G  294 (338)
T ss_pred             HHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCCCeeeCCC-------------------CC----C
Confidence            9999999998752   235799996 6789999999999999998755432221                   00    0


Q ss_pred             HHHHhhccceechHHHHHhcCCCCC-CHHHHHHHHHHHHHhc
Q 019878          289 TVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       289 ~~~~~~~~~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~  329 (334)
                      .    .....+|++|++++|||+|+ +++++++++++|+.++
T Consensus       295 ~----~~~~~~~~~k~~~~lg~~p~~~~~~~~~~~~~~~~~~  332 (338)
T PRK10675        295 D----LPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRH  332 (338)
T ss_pred             c----hhhhhcCHHHHHHHhCCCCcCcHHHHHHHHHHHHHhh
Confidence            0    01224699999999999999 9999999999999875

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=5.1e-42  Score=279.72  Aligned_cols=293  Identities=23%  Similarity=0.325  Sum_probs=235.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC----CCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI----SGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~   76 (334)
                      +||+||||+||||+||++.|..+||+|++++.-....    ......++++.+.-|+..+     ++..+|.|+|+|+..
T Consensus        28 lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p-----l~~evD~IyhLAapa  102 (350)
T KOG1429|consen   28 LRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP-----LLKEVDQIYHLAAPA  102 (350)
T ss_pred             cEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhH-----HHHHhhhhhhhccCC
Confidence            5899999999999999999999999999998754322    2222224566666665554     778899999999986


Q ss_pred             CC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCc--cccccccChHHHHHHHHHHH
Q 019878           77 EP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQV--HEEKYFCTQYERSKAVADKI  152 (334)
Q Consensus        77 ~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~--~~~~~~~~~Y~~sK~~~E~~  152 (334)
                      .+  -..++.....+|+.++.+++-.|++.+  +||+++||+.|||.+...+..|+..  ..|..+.+-|...|..+|.+
T Consensus       103 sp~~y~~npvktIktN~igtln~lglakrv~--aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~L  180 (350)
T KOG1429|consen  103 SPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAETL  180 (350)
T ss_pred             CCcccccCccceeeecchhhHHHHHHHHHhC--ceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHHHHH
Confidence            65  335677889999999999999999974  7999999999999987777766654  23334567899999999999


Q ss_pred             HHHHhh-cCCCEEEEecCceecCCCC-CchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCCCCe
Q 019878          153 ALQAAS-EGLPIVPVYPGVIYGPGKL-TTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGER  230 (334)
Q Consensus       153 ~~~~~~-~g~~~~ilR~~~v~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g~~  230 (334)
                      +..+.+ .|+.+.|.|+.+.|||.-+ ..+..+..+..+++++.+..++|+|.|.|+|+|++|++++++++++++..+. 
T Consensus       181 ~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~~~p-  259 (350)
T KOG1429|consen  181 CYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDYRGP-  259 (350)
T ss_pred             HHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCCcCC-
Confidence            999985 6999999999999999642 2356777888889999999999999999999999999999999999887664 


Q ss_pred             EEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhcC
Q 019878          231 YLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELG  309 (334)
Q Consensus       231 ~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG  309 (334)
                      +|++ .+.+|+.|+++++.+..+....+...+                   .   . ++.    ......|++++++.||
T Consensus       260 vNiGnp~e~Tm~elAemv~~~~~~~s~i~~~~-------------------~---~-~Dd----p~kR~pDit~ake~Lg  312 (350)
T KOG1429|consen  260 VNIGNPGEFTMLELAEMVKELIGPVSEIEFVE-------------------N---G-PDD----PRKRKPDITKAKEQLG  312 (350)
T ss_pred             cccCCccceeHHHHHHHHHHHcCCCcceeecC-------------------C---C-CCC----ccccCccHHHHHHHhC
Confidence            7886 467999999999999885443332111                   0   0 000    1222359999999999


Q ss_pred             CCCC-CHHHHHHHHHHHHHh
Q 019878          310 YNPR-SLKEGLQEVLPWLRS  328 (334)
Q Consensus       310 ~~p~-~~~e~i~~~~~~~~~  328 (334)
                      |.|+ +++|+++.++.|+++
T Consensus       313 W~Pkv~L~egL~~t~~~fr~  332 (350)
T KOG1429|consen  313 WEPKVSLREGLPLTVTYFRE  332 (350)
T ss_pred             CCCCCcHHHhhHHHHHHHHH
Confidence            9999 999999999999976

>PLN02240 UDP-glucose 4-epimerase

Probab=100.00  E-value=1.4e-41  Score=306.01  Aligned_cols=299  Identities=23%  Similarity=0.289  Sum_probs=230.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC-------CC--CCCCCeEEEEcCCCChhhHHHHhc--CCCEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-------GL--PSEGALELVYGDVTDYRSLVDACF--GCHVI   69 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~--~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~v   69 (334)
                      ++|||||||||||++|++.|+++|++|++++|......       ..  ....+++++.+|++|.+.+.++++  ++|+|
T Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d~v   85 (352)
T PLN02240          6 RTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFDAV   85 (352)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCCCEE
Confidence            47999999999999999999999999999987543210       00  011268899999999999998886  58999


Q ss_pred             EEeccccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHH
Q 019878           70 FHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (334)
Q Consensus        70 ih~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~  147 (334)
                      ||+|+....  ...++...+++|+.++.+++++|++. ++++||++||.++|+.....+.+|+.+..+   .+.|+.+|.
T Consensus        86 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~---~~~Y~~sK~  161 (352)
T PLN02240         86 IHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKH-GCKKLVFSSSATVYGQPEEVPCTEEFPLSA---TNPYGRTKL  161 (352)
T ss_pred             EEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccHHHhCCCCCCCCCCCCCCCC---CCHHHHHHH
Confidence            999997432  33456678999999999999999987 688999999999998766556677665444   588999999


Q ss_pred             HHHHHHHHHhh--cCCCEEEEecCceecCCCC--------CchhHHHHHHHHHHcCCCC--cccc------CCCCceeee
Q 019878          148 VADKIALQAAS--EGLPIVPVYPGVIYGPGKL--------TTGNLVAKLMIERFNGRLP--GYIG------YGNDRFSFC  209 (334)
Q Consensus       148 ~~E~~~~~~~~--~g~~~~ilR~~~v~G~~~~--------~~~~~~~~~~~~~~~~~~~--~~~~------~~~~~~~~i  209 (334)
                      ++|++++.+..  .+++++++|++++||+...        .....+..++.+...++.+  .+++      +|.+.++|+
T Consensus       162 ~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i  241 (352)
T PLN02240        162 FIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYI  241 (352)
T ss_pred             HHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeE
Confidence            99999998753  4789999999999997421        1112233445555545432  2333      678999999


Q ss_pred             eHHHHHHHHHHHhhcC-----CCCCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCC
Q 019878          210 HVDDVVDGHIAAMEKG-----RSGERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLP  283 (334)
Q Consensus       210 ~v~D~a~a~~~~~~~~-----~~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (334)
                      |++|++++++.++.+.     ..+++||++ ++.+|+.|+++.+.+.+|.+.+....+.                   .+
T Consensus       242 ~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~-------------------~~  302 (352)
T PLN02240        242 HVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIPLKLAPR-------------------RP  302 (352)
T ss_pred             EHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCCceeCCC-------------------CC
Confidence            9999999999888642     235899996 6889999999999999998766533221                   00


Q ss_pred             CCCHHHHHHhhccceechHHHHHhcCCCCC-CHHHHHHHHHHHHHhcC
Q 019878          284 LISYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSSG  330 (334)
Q Consensus       284 ~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~~  330 (334)
                       ..       ......|++|++++|||+|+ +++++|+++++|+++++
T Consensus       303 -~~-------~~~~~~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~~  342 (352)
T PLN02240        303 -GD-------AEEVYASTEKAEKELGWKAKYGIDEMCRDQWNWASKNP  342 (352)
T ss_pred             -CC-------hhhhhcCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCc
Confidence             00       11223699999999999999 99999999999998875

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=100.00  E-value=1.3e-41  Score=301.66  Aligned_cols=294  Identities=20%  Similarity=0.224  Sum_probs=223.2

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc----CCCEEEEeccccC
Q 019878            3 ILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF----GCHVIFHTAALVE   77 (334)
Q Consensus         3 ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----~~d~vih~a~~~~   77 (334)
                      |||||||||||+++++.|.++|+ +|++++|..... .+... ....+.+|+.+.+.+..+.+    ++|+|||+|+...
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~~   78 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFLNL-ADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACSD   78 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhhhh-hheeeeccCcchhHHHHHHhhccCCCCEEEECccccC
Confidence            69999999999999999999997 788887765322 12111 12456788888877777654    7999999999765


Q ss_pred             CCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHh
Q 019878           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA  157 (334)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~  157 (334)
                      ....++...+++|+.++.+++++|.+. ++ +||++||.++|+.......+|+.+.   .+.+.|+.+|..+|.+++++.
T Consensus        79 ~~~~~~~~~~~~n~~~~~~ll~~~~~~-~~-~~v~~SS~~vy~~~~~~~~e~~~~~---~p~~~Y~~sK~~~e~~~~~~~  153 (314)
T TIGR02197        79 TTETDGEYMMENNYQYSKRLLDWCAEK-GI-PFIYASSAATYGDGEAGFREGRELE---RPLNVYGYSKFLFDQYVRRRV  153 (314)
T ss_pred             ccccchHHHHHHHHHHHHHHHHHHHHh-CC-cEEEEccHHhcCCCCCCcccccCcC---CCCCHHHHHHHHHHHHHHHHh
Confidence            555667778899999999999999997 45 8999999999997654433333222   235889999999999998753


Q ss_pred             -h--cCCCEEEEecCceecCCCCCc---hhHHHHHHHHHHcCCCCccc------cCCCCceeeeeHHHHHHHHHHHhhcC
Q 019878          158 -S--EGLPIVPVYPGVIYGPGKLTT---GNLVAKLMIERFNGRLPGYI------GYGNDRFSFCHVDDVVDGHIAAMEKG  225 (334)
Q Consensus       158 -~--~g~~~~ilR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~v~D~a~a~~~~~~~~  225 (334)
                       +  .+++++++||+.+|||+....   .+++..++..+..+..+.++      ++|++.++|+|++|+++++..++.. 
T Consensus       154 ~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~-  232 (314)
T TIGR02197       154 LPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLEN-  232 (314)
T ss_pred             HhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHHhc-
Confidence             2  357999999999999985421   24555666677777766553      4678889999999999999999987 


Q ss_pred             CCCCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHH
Q 019878          226 RSGERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKA  304 (334)
Q Consensus       226 ~~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~  304 (334)
                      ..+++||++ ++++|+.|+++.+.+..|.+.+....|.                    |..   ..........+|++|+
T Consensus       233 ~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~--------------------~~~---~~~~~~~~~~~~~~k~  289 (314)
T TIGR02197       233 GVSGIFNLGTGRARSFNDLADAVFKALGKDEKIEYIPM--------------------PEA---LRGKYQYFTQADITKL  289 (314)
T ss_pred             ccCceEEcCCCCCccHHHHHHHHHHHhCCCCcceeccC--------------------ccc---cccccccccccchHHH
Confidence            567799996 5789999999999999987643322111                    000   0000112234799999


Q ss_pred             HHhcCCCCC-CHHHHHHHHHHHHH
Q 019878          305 KTELGYNPR-SLKEGLQEVLPWLR  327 (334)
Q Consensus       305 ~~~lG~~p~-~~~e~i~~~~~~~~  327 (334)
                      ++.|||+|+ +++++++++++|+.
T Consensus       290 ~~~l~~~p~~~l~~~l~~~~~~~~  313 (314)
T TIGR02197       290 RAAGYYGPFTTLEEGVKDYVQWLL  313 (314)
T ss_pred             HHhcCCCCcccHHHHHHHHHHHHh
Confidence            999999999 99999999999985

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=100.00  E-value=7.5e-42  Score=302.03  Aligned_cols=282  Identities=21%  Similarity=0.259  Sum_probs=217.6

Q ss_pred             EEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcC--CCEEEEeccccC---C
Q 019878            4 LVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAALVE---P   78 (334)
Q Consensus         4 lItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vih~a~~~~---~   78 (334)
                      ||||||||||++|++.|+++|++|+++.+.               ..+|++|.+++.++++.  +|+|||||+...   .
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~---------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~   65 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH---------------KELDLTRQADVEAFFAKEKPTYVILAAAKVGGIHA   65 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc---------------ccCCCCCHHHHHHHHhccCCCEEEEeeeeecccch
Confidence            699999999999999999999988766432               13799999999998874  899999999743   2


Q ss_pred             CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccc-cccccC-hHHHHHHHHHHHHHHH
Q 019878           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHE-EKYFCT-QYERSKAVADKIALQA  156 (334)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~-~~~~~~-~Y~~sK~~~E~~~~~~  156 (334)
                      +..++..+++.|+.++.+++++|++. ++++||++||..||+.....+.+|+++.. +..+.+ .|+.+|.++|++++.+
T Consensus        66 ~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~  144 (306)
T PLN02725         66 NMTYPADFIRENLQIQTNVIDAAYRH-GVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAY  144 (306)
T ss_pred             hhhCcHHHHHHHhHHHHHHHHHHHHc-CCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHHHHH
Confidence            34566778999999999999999998 68999999999999976666677765322 222223 5999999999999887


Q ss_pred             hh-cCCCEEEEecCceecCCCCC---chhHHHHHH----HHHHcCCCCcc-ccCCCCceeeeeHHHHHHHHHHHhhcCCC
Q 019878          157 AS-EGLPIVPVYPGVIYGPGKLT---TGNLVAKLM----IERFNGRLPGY-IGYGNDRFSFCHVDDVVDGHIAAMEKGRS  227 (334)
Q Consensus       157 ~~-~g~~~~ilR~~~v~G~~~~~---~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~i~v~D~a~a~~~~~~~~~~  227 (334)
                      .+ .+++++++||+.+|||+...   ....+..++    .....+.+..+ ++++++.++|+|++|+++++..++++...
T Consensus       145 ~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~~~  224 (306)
T PLN02725        145 RIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRRYSG  224 (306)
T ss_pred             HHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHhcccc
Confidence            64 59999999999999997531   122333333    23334554444 67889999999999999999999987655


Q ss_pred             CCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHH
Q 019878          228 GERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKT  306 (334)
Q Consensus       228 g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~  306 (334)
                      ++.||++ ++.+|+.|+++.+.+..+.+.+....+                   ..+..        .....+|++|++ 
T Consensus       225 ~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~-------------------~~~~~--------~~~~~~d~~k~~-  276 (306)
T PLN02725        225 AEHVNVGSGDEVTIKELAELVKEVVGFEGELVWDT-------------------SKPDG--------TPRKLMDSSKLR-  276 (306)
T ss_pred             CcceEeCCCCcccHHHHHHHHHHHhCCCCceeecC-------------------CCCCc--------ccccccCHHHHH-
Confidence            6788996 578999999999999998654332111                   00000        112347999997 


Q ss_pred             hcCCCCC-CHHHHHHHHHHHHHhc
Q 019878          307 ELGYNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       307 ~lG~~p~-~~~e~i~~~~~~~~~~  329 (334)
                      .|||+|+ +++++++++++|+.++
T Consensus       277 ~lg~~p~~~~~~~l~~~~~~~~~~  300 (306)
T PLN02725        277 SLGWDPKFSLKDGLQETYKWYLEN  300 (306)
T ss_pred             HhCCCCCCCHHHHHHHHHHHHHhh
Confidence            5999999 9999999999999875

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=100.00  E-value=5e-42  Score=296.41  Aligned_cols=253  Identities=34%  Similarity=0.534  Sum_probs=202.5

Q ss_pred             EEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCC--CCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCC
Q 019878            4 LVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDIS--GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPW   79 (334)
Q Consensus         4 lItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~--~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~   79 (334)
                      |||||+||||++|+++|+++|  ++|+++++.+....  .+...+..+++.+|++|.+++.++++++|+|||+|+.....
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~   80 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPPW   80 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccccc
Confidence            799999999999999999999  79999998876433  22222334499999999999999999999999999986654


Q ss_pred             C-CCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCC--Ccc--CCCCCccccccccChHHHHHHHHHHHHH
Q 019878           80 L-PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD--GYI--ADENQVHEEKYFCTQYERSKAVADKIAL  154 (334)
Q Consensus        80 ~-~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~--~~~--~~e~~~~~~~~~~~~Y~~sK~~~E~~~~  154 (334)
                      . ...+.++++|+.||++++++|++. +++||||+||.+++++..  ...  .+|+.+.+ ..+.+.|+.||+++|+.++
T Consensus        81 ~~~~~~~~~~vNV~GT~nvl~aa~~~-~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~-~~~~~~Y~~SK~~AE~~V~  158 (280)
T PF01073_consen   81 GDYPPEEYYKVNVDGTRNVLEAARKA-GVKRLVYTSSISVVFDNYKGDPIINGDEDTPYP-SSPLDPYAESKALAEKAVL  158 (280)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcCcceeEeccCCCCcccCCcCCccc-ccccCchHHHHHHHHHHHH
Confidence            3 456679999999999999999998 799999999999998622  122  24444333 3357889999999999999


Q ss_pred             HHhh------cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhc---C
Q 019878          155 QAAS------EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEK---G  225 (334)
Q Consensus       155 ~~~~------~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~---~  225 (334)
                      ++..      ..+.+++|||+.||||++....   +.+......+......++++...+++||+|+|+|++.+++.   +
T Consensus       159 ~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~---~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~  235 (280)
T PF01073_consen  159 EANGSELKNGGRLRTCALRPAGIYGPGDQRLV---PRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEP  235 (280)
T ss_pred             hhcccccccccceeEEEEeccEEeCccccccc---chhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhccc
Confidence            9765      2499999999999999875432   33333344555666778888899999999999999988652   2


Q ss_pred             -----CCCCeEEec-CCCCC-HHHHHHHHHHHhCCCCCc-cccc
Q 019878          226 -----RSGERYLLT-GENAS-FMQIFDMAAVITGTSRPR-FCIP  261 (334)
Q Consensus       226 -----~~g~~~~i~-g~~~s-~~e~~~~i~~~~g~~~~~-~~~~  261 (334)
                           ..|+.|+++ +++++ +.|+...+.+.+|.+.+. +.+|
T Consensus       236 ~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~~~~lp  279 (280)
T PF01073_consen  236 GKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPKSISLP  279 (280)
T ss_pred             cccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCcccCCC
Confidence                 369999998 57777 999999999999998776 5554

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN00016 RNA-binding protein; Provisional

Probab=100.00  E-value=3.8e-40  Score=298.62  Aligned_cols=289  Identities=20%  Similarity=0.269  Sum_probs=219.4

Q ss_pred             CcEEEE----cCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC----------CCCeEEEEcCCCChhhHHHHhcCC
Q 019878            1 MKILVS----GASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS----------EGALELVYGDVTDYRSLVDACFGC   66 (334)
Q Consensus         1 m~ilIt----G~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----------~~~v~~~~~Dl~d~~~~~~~~~~~   66 (334)
                      |+||||    |||||||++|++.|+++||+|++++|+......+..          ..+++++.+|+.|.+.+. ...++
T Consensus        53 ~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~-~~~~~  131 (378)
T PLN00016         53 KKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKV-AGAGF  131 (378)
T ss_pred             ceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhh-ccCCc
Confidence            579999    999999999999999999999999998754322110          125899999998733322 22469


Q ss_pred             CEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHH
Q 019878           67 HVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (334)
Q Consensus        67 d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK  146 (334)
                      |+|||+++.              +..++.+++++|++. ++++||++||.++|+.....+..|+....+      +. +|
T Consensus       132 d~Vi~~~~~--------------~~~~~~~ll~aa~~~-gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p------~~-sK  189 (378)
T PLN00016        132 DVVYDNNGK--------------DLDEVEPVADWAKSP-GLKQFLFCSSAGVYKKSDEPPHVEGDAVKP------KA-GH  189 (378)
T ss_pred             cEEEeCCCC--------------CHHHHHHHHHHHHHc-CCCEEEEEccHhhcCCCCCCCCCCCCcCCC------cc-hH
Confidence            999999752              245788999999987 799999999999999765555555544333      22 89


Q ss_pred             HHHHHHHHHHhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC
Q 019878          147 AVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR  226 (334)
Q Consensus       147 ~~~E~~~~~~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~  226 (334)
                      ..+|.++++   .+++++++||+++||++...  .....++.+...+.+..+++++.+.++|+|++|+|+++..++.++.
T Consensus       190 ~~~E~~l~~---~~l~~~ilRp~~vyG~~~~~--~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~  264 (378)
T PLN00016        190 LEVEAYLQK---LGVNWTSFRPQYIYGPGNNK--DCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPK  264 (378)
T ss_pred             HHHHHHHHH---cCCCeEEEeceeEECCCCCC--chHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCcc
Confidence            999998765   68999999999999997532  2334455566677777677888999999999999999999998864


Q ss_pred             -CCCeEEecC-CCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHH
Q 019878          227 -SGERYLLTG-ENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKA  304 (334)
Q Consensus       227 -~g~~~~i~g-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~  304 (334)
                       .+++||+++ +.+|+.|+++.+.+.+|.+.++...+......           ..... .     ......+..|++|+
T Consensus       265 ~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~~~~~-----------~~~~~-~-----p~~~~~~~~d~~ka  327 (378)
T PLN00016        265 AAGQIFNIVSDRAVTFDGMAKACAKAAGFPEEIVHYDPKAVGF-----------GAKKA-F-----PFRDQHFFASPRKA  327 (378)
T ss_pred             ccCCEEEecCCCccCHHHHHHHHHHHhCCCCceeecCccccCc-----------ccccc-c-----cccccccccCHHHH
Confidence             578999975 67999999999999999876544332211000           00000 0     00112334699999


Q ss_pred             HHhcCCCCC-CHHHHHHHHHHHHHhcCCCCC
Q 019878          305 KTELGYNPR-SLKEGLQEVLPWLRSSGMIKY  334 (334)
Q Consensus       305 ~~~lG~~p~-~~~e~i~~~~~~~~~~~~~~~  334 (334)
                      +++|||+|+ +++++|+++++||+.++.++|
T Consensus       328 ~~~LGw~p~~~l~egl~~~~~~~~~~~~~~~  358 (378)
T PLN00016        328 KEELGWTPKFDLVEDLKDRYELYFGRGRDRK  358 (378)
T ss_pred             HHhcCCCCCCCHHHHHHHHHHHHHhcCCCcc
Confidence            999999999 999999999999999998875

>CHL00194 ycf39 Ycf39; Provisional

Probab=100.00  E-value=4.8e-40  Score=291.25  Aligned_cols=296  Identities=19%  Similarity=0.259  Sum_probs=226.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~   80 (334)
                      |||||||||||||++|+++|+++|++|++++|+.++...+.. .+++++.+|++|++.+.++++++|+|||+++..   .
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~-~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~---~   76 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKE-WGAELVYGDLSLPETLPPSFKGVTAIIDASTSR---P   76 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhh-cCCEEEECCCCCHHHHHHHHCCCCEEEECCCCC---C
Confidence            899999999999999999999999999999998654433222 379999999999999999999999999998642   1


Q ss_pred             CCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHhhcC
Q 019878           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEG  160 (334)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g  160 (334)
                      .++..+.+.|+.++.+++++|++. +++|||++||.++....                .++|..+|..+|++++.   .+
T Consensus        77 ~~~~~~~~~~~~~~~~l~~aa~~~-gvkr~I~~Ss~~~~~~~----------------~~~~~~~K~~~e~~l~~---~~  136 (317)
T CHL00194         77 SDLYNAKQIDWDGKLALIEAAKAA-KIKRFIFFSILNAEQYP----------------YIPLMKLKSDIEQKLKK---SG  136 (317)
T ss_pred             CCccchhhhhHHHHHHHHHHHHHc-CCCEEEEeccccccccC----------------CChHHHHHHHHHHHHHH---cC
Confidence            345567889999999999999998 79999999986432110                14588999999998865   78


Q ss_pred             CCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC-CCCeEEecC-CCC
Q 019878          161 LPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR-SGERYLLTG-ENA  238 (334)
Q Consensus       161 ~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-~g~~~~i~g-~~~  238 (334)
                      ++++++||+.+|+..       +.......+.+.+ ....++.+.++|+|++|+|+++..++.++. .+++||++| +.+
T Consensus       137 l~~tilRp~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~g~~~~  208 (317)
T CHL00194        137 IPYTIFRLAGFFQGL-------ISQYAIPILEKQP-IWITNESTPISYIDTQDAAKFCLKSLSLPETKNKTFPLVGPKSW  208 (317)
T ss_pred             CCeEEEeecHHhhhh-------hhhhhhhhccCCc-eEecCCCCccCccCHHHHHHHHHHHhcCccccCcEEEecCCCcc
Confidence            999999999888631       1112222223333 344556778899999999999999998754 588999975 679


Q ss_pred             CHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhcCCCCC---CH
Q 019878          239 SFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPR---SL  315 (334)
Q Consensus       239 s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~---~~  315 (334)
                      |+.|+++.+.+.+|.+.+...+|.+..+..+.+..++.+.......+.........++..++.+++.+.||+.|.   ++
T Consensus       209 s~~el~~~~~~~~g~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~  288 (317)
T CHL00194        209 NSSEIISLCEQLSGQKAKISRVPLFLLKLLRQITGFFEWTWNISDRLAFVEILNTSNNFSSSMAELYKIFKIDPNELISL  288 (317)
T ss_pred             CHHHHHHHHHHHhCCCCeEEeCCHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCCcCCCHHHHHHHhCCChhhhhhH
Confidence            999999999999999988889999998877766544321111111111112222334455678899999999983   89


Q ss_pred             HHHHHHHHHHHHh
Q 019878          316 KEGLQEVLPWLRS  328 (334)
Q Consensus       316 ~e~i~~~~~~~~~  328 (334)
                      +++++++++-.++
T Consensus       289 ~~~~~~~~~~~~~  301 (317)
T CHL00194        289 EDYFQEYFERILK  301 (317)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999988886654

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=100.00  E-value=1e-40  Score=290.04  Aligned_cols=275  Identities=26%  Similarity=0.338  Sum_probs=202.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcC--CCEEEEeccccC-
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAALVE-   77 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vih~a~~~~-   77 (334)
                      |||||||++|+||++|.+.|.++|++|+++.|+                ..|+.|.+.+.+.+.+  +|+||||||... 
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~----------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~   64 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS----------------DLDLTDPEAVAKLLEAFKPDVVINCAAYTNV   64 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT----------------CS-TTSHHHHHHHHHHH--SEEEE------H
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch----------------hcCCCCHHHHHHHHHHhCCCeEeccceeecH
Confidence            999999999999999999999999999999777                3599999999999875  999999999854 


Q ss_pred             -CCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHH
Q 019878           78 -PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (334)
Q Consensus        78 -~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~  156 (334)
                       .++.+++..+.+|+.++.+|+++|.+.+  .++||+||..||+.....+..|++.+.|   .+.||++|.++|+.+++.
T Consensus        65 ~~ce~~p~~a~~iN~~~~~~la~~~~~~~--~~li~~STd~VFdG~~~~~y~E~d~~~P---~~~YG~~K~~~E~~v~~~  139 (286)
T PF04321_consen   65 DACEKNPEEAYAINVDATKNLAEACKERG--ARLIHISTDYVFDGDKGGPYTEDDPPNP---LNVYGRSKLEGEQAVRAA  139 (286)
T ss_dssp             HHHHHSHHHHHHHHTHHHHHHHHHHHHCT---EEEEEEEGGGS-SSTSSSB-TTS-------SSHHHHHHHHHHHHHHHH
T ss_pred             HhhhhChhhhHHHhhHHHHHHHHHHHHcC--CcEEEeeccEEEcCCcccccccCCCCCC---CCHHHHHHHHHHHHHHHh
Confidence             4778899999999999999999999974  3999999999998887766777766655   599999999999999985


Q ss_pred             hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCC----CCeEE
Q 019878          157 ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRS----GERYL  232 (334)
Q Consensus       157 ~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~----g~~~~  232 (334)
                      ..   .+.|+|++++||+..   .+++..++.....++...+.  .++.++++|++|+|+++..++++...    .++||
T Consensus       140 ~~---~~~IlR~~~~~g~~~---~~~~~~~~~~~~~~~~i~~~--~d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh  211 (286)
T PF04321_consen  140 CP---NALILRTSWVYGPSG---RNFLRWLLRRLRQGEPIKLF--DDQYRSPTYVDDLARVILELIEKNLSGASPWGIYH  211 (286)
T ss_dssp             -S---SEEEEEE-SEESSSS---SSHHHHHHHHHHCTSEEEEE--SSCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE
T ss_pred             cC---CEEEEecceecccCC---CchhhhHHHHHhcCCeeEee--CCceeCCEEHHHHHHHHHHHHHhcccccccceeEE
Confidence            44   699999999999942   45677777777777766554  36889999999999999999987543    67999


Q ss_pred             ecC-CCCCHHHHHHHHHHHhCCCCCcc-cccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhcCC
Q 019878          233 LTG-ENASFMQIFDMAAVITGTSRPRF-CIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGY  310 (334)
Q Consensus       233 i~g-~~~s~~e~~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~  310 (334)
                      ++| +.+|..|+++.+++.+|.+.+.+ +++.                 ...+.     ......+..+|++|+++.||+
T Consensus       212 ~~~~~~~S~~e~~~~i~~~~~~~~~~i~~~~~-----------------~~~~~-----~~~rp~~~~L~~~kl~~~~g~  269 (286)
T PF04321_consen  212 LSGPERVSRYEFAEAIAKILGLDPELIKPVSS-----------------SEFPR-----AAPRPRNTSLDCRKLKNLLGI  269 (286)
T ss_dssp             ---BS-EEHHHHHHHHHHHHTHCTTEEEEESS-----------------TTSTT-----SSGS-SBE-B--HHHHHCTTS
T ss_pred             EecCcccCHHHHHHHHHHHhCCCCceEEeccc-----------------ccCCC-----CCCCCCcccccHHHHHHccCC
Confidence            975 67999999999999999876332 2210                 00000     011234557899999999999


Q ss_pred             CCCCHHHHHHHHHHHH
Q 019878          311 NPRSLKEGLQEVLPWL  326 (334)
Q Consensus       311 ~p~~~~e~i~~~~~~~  326 (334)
                      ++.+++++++++++.|
T Consensus       270 ~~~~~~~~l~~~~~~~  285 (286)
T PF04321_consen  270 KPPPWREGLEELVKQY  285 (286)
T ss_dssp             ---BHHHHHHHHHHHH
T ss_pred             CCcCHHHHHHHHHHHh
Confidence            9999999999999876

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=3.1e-39  Score=270.90  Aligned_cols=275  Identities=23%  Similarity=0.270  Sum_probs=227.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcC--CCEEEEeccc--c
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAAL--V   76 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vih~a~~--~   76 (334)
                      |+|||||++|++|++|++.|. .+++|++++|..                +|++|++.+.+++.+  +|+|||+|++  +
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~----------------~Ditd~~~v~~~i~~~~PDvVIn~AAyt~v   63 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE----------------LDITDPDAVLEVIRETRPDVVINAAAYTAV   63 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc----------------ccccChHHHHHHHHhhCCCEEEECcccccc
Confidence            899999999999999999998 668999998876                599999999999974  8999999998  5


Q ss_pred             CCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHH
Q 019878           77 EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (334)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~  156 (334)
                      +.++.+++..+.+|..++.+++++|++.+.  ++||+||.+||....+.++.|++.+.|   .+.||+||+++|+.++.+
T Consensus        64 D~aE~~~e~A~~vNa~~~~~lA~aa~~~ga--~lVhiSTDyVFDG~~~~~Y~E~D~~~P---~nvYG~sKl~GE~~v~~~  138 (281)
T COG1091          64 DKAESEPELAFAVNATGAENLARAAAEVGA--RLVHISTDYVFDGEKGGPYKETDTPNP---LNVYGRSKLAGEEAVRAA  138 (281)
T ss_pred             ccccCCHHHHHHhHHHHHHHHHHHHHHhCC--eEEEeecceEecCCCCCCCCCCCCCCC---hhhhhHHHHHHHHHHHHh
Confidence            568888999999999999999999999843  999999999999888777777777666   489999999999999985


Q ss_pred             hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCCCCeEEecC-
Q 019878          157 ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTG-  235 (334)
Q Consensus       157 ~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g~~~~i~g-  235 (334)
                      +   -...|+|.+++||...   .++...++....++....+..  +|..+++++.|+|+++..++.....+++||+++ 
T Consensus       139 ~---~~~~I~Rtswv~g~~g---~nFv~tml~la~~~~~l~vv~--Dq~gsPt~~~dlA~~i~~ll~~~~~~~~yH~~~~  210 (281)
T COG1091         139 G---PRHLILRTSWVYGEYG---NNFVKTMLRLAKEGKELKVVD--DQYGSPTYTEDLADAILELLEKEKEGGVYHLVNS  210 (281)
T ss_pred             C---CCEEEEEeeeeecCCC---CCHHHHHHHHhhcCCceEEEC--CeeeCCccHHHHHHHHHHHHhccccCcEEEEeCC
Confidence            4   4599999999999853   567777777777777776654  599999999999999999999887777999986 


Q ss_pred             CCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhcCCCCCCH
Q 019878          236 ENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPRSL  315 (334)
Q Consensus       236 ~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~  315 (334)
                      ...||.|+++.|.+..+.+........                ....+     ..-....+..+|+.|+.+.+|+.|.++
T Consensus       211 g~~Swydfa~~I~~~~~~~~~v~~~~~----------------~~~~~-----~~a~RP~~S~L~~~k~~~~~g~~~~~w  269 (281)
T COG1091         211 GECSWYEFAKAIFEEAGVDGEVIEPIA----------------SAEYP-----TPAKRPANSSLDTKKLEKAFGLSLPEW  269 (281)
T ss_pred             CcccHHHHHHHHHHHhCCCcccccccc----------------ccccC-----ccCCCCcccccchHHHHHHhCCCCccH
Confidence            447999999999999986653321100                00001     011122344589999999999999999


Q ss_pred             HHHHHHHHHHH
Q 019878          316 KEGLQEVLPWL  326 (334)
Q Consensus       316 ~e~i~~~~~~~  326 (334)
                      +++++.+++..
T Consensus       270 ~~~l~~~~~~~  280 (281)
T COG1091         270 REALKALLDEL  280 (281)
T ss_pred             HHHHHHHHhhc
Confidence            99999998753

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=100.00  E-value=3.4e-39  Score=282.49  Aligned_cols=279  Identities=21%  Similarity=0.196  Sum_probs=213.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcC--CCEEEEeccccCC-
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAALVEP-   78 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vih~a~~~~~-   78 (334)
                      ||||||||||||+++++.|+++|++|++++|+                .+|+.|.+.+.+++++  +|+|||+|+.... 
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~----------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~   64 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS----------------QLDLTDPEALERLLRAIRPDAVVNTAAYTDVD   64 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc----------------ccCCCCHHHHHHHHHhCCCCEEEECCcccccc
Confidence            69999999999999999999999999999885                3699999999999986  5999999997432 


Q ss_pred             -CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHh
Q 019878           79 -WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA  157 (334)
Q Consensus        79 -~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~  157 (334)
                       ...++...+++|+.++.+++++|++. +. +||++||.++|+.....+.+|+++..+   .+.|+.+|..+|+.++.+ 
T Consensus        65 ~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~Ss~~vy~~~~~~~~~E~~~~~~---~~~Y~~~K~~~E~~~~~~-  138 (287)
T TIGR01214        65 GAESDPEKAFAVNALAPQNLARAAARH-GA-RLVHISTDYVFDGEGKRPYREDDATNP---LNVYGQSKLAGEQAIRAA-  138 (287)
T ss_pred             ccccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeeeeeecCCCCCCCCCCCCCCC---cchhhHHHHHHHHHHHHh-
Confidence             22345667899999999999999987 43 899999999998765556666654433   588999999999999874 


Q ss_pred             hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcC-CCCCeEEec-C
Q 019878          158 SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG-RSGERYLLT-G  235 (334)
Q Consensus       158 ~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~-~~g~~~~i~-g  235 (334)
                        +++++++||+++||++..  .+++..++.....+......+  ++.++++|++|+++++..+++.+ ..+++||++ +
T Consensus       139 --~~~~~ilR~~~v~G~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~ni~~~  212 (287)
T TIGR01214       139 --GPNALIVRTSWLYGGGGG--RNFVRTMLRLAGRGEELRVVD--DQIGSPTYAKDLARVIAALLQRLARARGVYHLANS  212 (287)
T ss_pred             --CCCeEEEEeeecccCCCC--CCHHHHHHHHhhcCCCceEec--CCCcCCcCHHHHHHHHHHHHhhccCCCCeEEEECC
Confidence              689999999999999742  344555555555555444443  46789999999999999999876 458899996 5


Q ss_pred             CCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhcCCCCCCH
Q 019878          236 ENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPRSL  315 (334)
Q Consensus       236 ~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~  315 (334)
                      +.+|+.|+++.+.+.+|.+......|......           ....+..     ........+|++|++++|||++.++
T Consensus       213 ~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~-----~~~~~~~~~d~~~~~~~lg~~~~~~  276 (287)
T TIGR01214       213 GQCSWYEFAQAIFEEAGADGLLLHPQEVKPIS-----------SKEYPRP-----ARRPAYSVLDNTKLVKTLGTPLPHW  276 (287)
T ss_pred             CCcCHHHHHHHHHHHhCcccccccCceeEeec-----------HHHcCCC-----CCCCCccccchHHHHHHcCCCCccH
Confidence            77999999999999999765432211000000           0000000     0011334689999999999966699


Q ss_pred             HHHHHHHHH
Q 019878          316 KEGLQEVLP  324 (334)
Q Consensus       316 ~e~i~~~~~  324 (334)
                      +++|.++++
T Consensus       277 ~~~l~~~~~  285 (287)
T TIGR01214       277 REALRAYLQ  285 (287)
T ss_pred             HHHHHHHHh
Confidence            999998876

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=5.7e-39  Score=268.30  Aligned_cols=299  Identities=23%  Similarity=0.314  Sum_probs=236.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC-C------C-CCCCCCeEEEEcCCCChhhHHHHhcC--CCEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-S------G-LPSEGALELVYGDVTDYRSLVDACFG--CHVIF   70 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~------~-~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vi   70 (334)
                      ++||||||+||||+|.+-+|+++||.|.+++.=.... .      . ..+..++.++++|++|.+.++++++.  +|.|+
T Consensus         3 ~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~   82 (343)
T KOG1371|consen    3 KHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAVM   82 (343)
T ss_pred             cEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceEE
Confidence            4799999999999999999999999999998632211 0      0 11124799999999999999999975  99999


Q ss_pred             Eeccc--cCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHH
Q 019878           71 HTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAV  148 (334)
Q Consensus        71 h~a~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~  148 (334)
                      |+|+.  +..+.++|..++..|+.|+.+|++.++++ +++.+|++||+.|||.+...+..|+.+..  .|.++|+.+|.+
T Consensus        83 Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~-~~~~~V~sssatvYG~p~~ip~te~~~t~--~p~~pyg~tK~~  159 (343)
T KOG1371|consen   83 HFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAH-NVKALVFSSSATVYGLPTKVPITEEDPTD--QPTNPYGKTKKA  159 (343)
T ss_pred             eehhhhccchhhhCchhheehhhhhHHHHHHHHHHc-CCceEEEecceeeecCcceeeccCcCCCC--CCCCcchhhhHH
Confidence            99997  55677889999999999999999999999 59999999999999999988888887766  346999999999


Q ss_pred             HHHHHHHHhh-cCCCEEEEecCceecCC------CCC---chhHHHHHHHHHHcC--------CCCccccCCCCceeeee
Q 019878          149 ADKIALQAAS-EGLPIVPVYPGVIYGPG------KLT---TGNLVAKLMIERFNG--------RLPGYIGYGNDRFSFCH  210 (334)
Q Consensus       149 ~E~~~~~~~~-~g~~~~ilR~~~v~G~~------~~~---~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~i~  210 (334)
                      .|+++..+.. ++..++.||.++++|..      +.+   ..++++ .+.....+        +......+|...|+++|
T Consensus       160 iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p-~v~~vaigr~~~l~v~g~d~~t~dgt~vrdyi~  238 (343)
T KOG1371|consen  160 IEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLP-YVFQVAIGRRPNLQVVGRDYTTIDGTIVRDYIH  238 (343)
T ss_pred             HHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccc-cccchhhcccccceeecCcccccCCCeeeccee
Confidence            9999999875 57999999999999931      111   122332 11111112        12223345688999999


Q ss_pred             HHHHHHHHHHHhhcCC---CCCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCC
Q 019878          211 VDDVVDGHIAAMEKGR---SGERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLIS  286 (334)
Q Consensus       211 v~D~a~a~~~~~~~~~---~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (334)
                      +-|+|+....++.+..   .-++||++ |...++.++.+.+.++.|.+.|..-+|.               ..+.     
T Consensus       239 v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~~v~~---------------R~gd-----  298 (343)
T KOG1371|consen  239 VLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKKVVPR---------------RNGD-----  298 (343)
T ss_pred             eEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCccccCC---------------CCCC-----
Confidence            9999999999998753   23499995 7888999999999999999887644331               0011     


Q ss_pred             HHHHHHhhccceechHHHHHhcCCCCC-CHHHHHHHHHHHHHhcC
Q 019878          287 YPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSSG  330 (334)
Q Consensus       287 ~~~~~~~~~~~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~~  330 (334)
                             ......+++++.++|||+|+ +++|+++++++|..++.
T Consensus       299 -------v~~~ya~~~~a~~elgwk~~~~iee~c~dlw~W~~~np  336 (343)
T KOG1371|consen  299 -------VAFVYANPSKAQRELGWKAKYGLQEMLKDLWRWQKQNP  336 (343)
T ss_pred             -------ceeeeeChHHHHHHhCCccccCHHHHHHHHHHHHhcCC
Confidence                   12234688999999999999 99999999999998764

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=100.00  E-value=3.7e-38  Score=281.03  Aligned_cols=297  Identities=24%  Similarity=0.323  Sum_probs=224.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC-CCCCC---CCCeEEEEcCCCChhhHHHHhc--CCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-SGLPS---EGALELVYGDVTDYRSLVDACF--GCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~---~~~v~~~~~Dl~d~~~~~~~~~--~~d~vih~a~~   75 (334)
                      |||||||||+||+++++.|+++|++|++++|..... ..+..   ..+++++.+|+.+.+.+.+++.  ++|+|||+||.
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~   80 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL   80 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence            689999999999999999999999999887643321 11111   1257789999999999999886  59999999997


Q ss_pred             cCC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHH
Q 019878           76 VEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIA  153 (334)
Q Consensus        76 ~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~  153 (334)
                      ...  ...++...++.|+.++.+++++|.+. +++++|++||.++|+.....+.+|+.+..+   .+.|+.+|..+|..+
T Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~---~~~y~~sK~~~e~~~  156 (328)
T TIGR01179        81 IAVGESVQDPLKYYRNNVVNTLNLLEAMQQT-GVKKFIFSSSAAVYGEPSSIPISEDSPLGP---INPYGRSKLMSERIL  156 (328)
T ss_pred             cCcchhhcCchhhhhhhHHHHHHHHHHHHhc-CCCEEEEecchhhcCCCCCCCccccCCCCC---CCchHHHHHHHHHHH
Confidence            432  33456678899999999999999987 678999999999998766555666654433   478999999999999


Q ss_pred             HHHhh--cCCCEEEEecCceecCCCCC--------chhHHHHHHHHHH-cCCCCcc------ccCCCCceeeeeHHHHHH
Q 019878          154 LQAAS--EGLPIVPVYPGVIYGPGKLT--------TGNLVAKLMIERF-NGRLPGY------IGYGNDRFSFCHVDDVVD  216 (334)
Q Consensus       154 ~~~~~--~g~~~~ilR~~~v~G~~~~~--------~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~~~i~v~D~a~  216 (334)
                      +.+.+  .+++++++||+.+||+....        ..+++..+..... ......+      .+++++.++|+|++|+++
T Consensus       157 ~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~  236 (328)
T TIGR01179       157 RDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLAD  236 (328)
T ss_pred             HHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHH
Confidence            98763  58999999999999985321        1223333333322 1222222      235678899999999999


Q ss_pred             HHHHHhhcC---CCCCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHH
Q 019878          217 GHIAAMEKG---RSGERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHV  292 (334)
Q Consensus       217 a~~~~~~~~---~~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (334)
                      ++..++.+.   ..+++||++ ++.+|+.|+++.+.+..|.+.+....+.+                   + .       
T Consensus       237 ~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~~~~~~~-------------------~-~-------  289 (328)
T TIGR01179       237 AHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPVELAPRR-------------------P-G-------  289 (328)
T ss_pred             HHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcceEeCCCC-------------------C-c-------
Confidence            999998752   357899996 57899999999999999987654322210                   0 0       


Q ss_pred             hhccceechHHHHHhcCCCCC-C-HHHHHHHHHHHHHhc
Q 019878          293 LAHQWAYSCVKAKTELGYNPR-S-LKEGLQEVLPWLRSS  329 (334)
Q Consensus       293 ~~~~~~~d~~k~~~~lG~~p~-~-~~e~i~~~~~~~~~~  329 (334)
                      .......|++|++++|||+|+ + ++++++++++|+.+|
T Consensus       290 ~~~~~~~~~~~~~~~lg~~p~~~~l~~~~~~~~~~~~~~  328 (328)
T TIGR01179       290 DPASLVADASKIRRELGWQPKYTDLEIIIKTAWRWESRN  328 (328)
T ss_pred             cccchhcchHHHHHHhCCCCCcchHHHHHHHHHHHHhcC
Confidence            011234689999999999999 6 999999999999765

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN02686 cinnamoyl-CoA reductase

Probab=100.00  E-value=6.4e-38  Score=282.32  Aligned_cols=284  Identities=23%  Similarity=0.294  Sum_probs=207.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC----------CCCeEEEEcCCCChhhHHHHhcCCCEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS----------EGALELVYGDVTDYRSLVDACFGCHVIF   70 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----------~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   70 (334)
                      |+||||||+||||+++++.|+++|++|+++.|+......+..          ..++.++.+|++|.+.+.++++++|+||
T Consensus        54 k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~~d~V~  133 (367)
T PLN02686         54 RLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGCAGVF  133 (367)
T ss_pred             CEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHhccEEE
Confidence            479999999999999999999999999998887543211100          1257899999999999999999999999


Q ss_pred             EeccccCCCC--CCcccchhhhhHHHHHHHHHHHhcCCCcEEEEeccc--ceeccC--CC--ccCCCCCccc---ccccc
Q 019878           71 HTAALVEPWL--PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF--FALGST--DG--YIADENQVHE---EKYFC  139 (334)
Q Consensus        71 h~a~~~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~--~v~~~~--~~--~~~~e~~~~~---~~~~~  139 (334)
                      |+|+......  .......+.|+.++.+++++|++..+++|||++||.  .+|+..  ..  ...+|+...+   +..+.
T Consensus       134 hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~~~p~  213 (367)
T PLN02686        134 HTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCRDNK  213 (367)
T ss_pred             ecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhhccccc
Confidence            9999754321  122456788999999999999986469999999996  478642  11  2244443221   12245


Q ss_pred             ChHHHHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHH
Q 019878          140 TQYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGH  218 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  218 (334)
                      ++|+.+|.++|++++.+.+ +|++++++||++||||+.....   ...+...+.+. ..+++++  .++|+||+|+++++
T Consensus       214 ~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~---~~~~~~~~~g~-~~~~g~g--~~~~v~V~Dva~A~  287 (367)
T PLN02686        214 LWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRN---STATIAYLKGA-QEMLADG--LLATADVERLAEAH  287 (367)
T ss_pred             chHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCC---ChhHHHHhcCC-CccCCCC--CcCeEEHHHHHHHH
Confidence            7899999999999998764 6999999999999999753211   11222344454 3344544  45799999999999


Q ss_pred             HHHhhcC---CCCCeEEecCCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhc
Q 019878          219 IAAMEKG---RSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAH  295 (334)
Q Consensus       219 ~~~~~~~---~~g~~~~i~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (334)
                      +.+++..   ..+++|+++|+.+++.|+++.+.+.+|.+.+....+.                   ..       .....
T Consensus       288 ~~al~~~~~~~~~~~yi~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~-------------------~~-------~~d~~  341 (367)
T PLN02686        288 VCVYEAMGNKTAFGRYICFDHVVSREDEAEELARQIGLPINKIAGNS-------------------SS-------DDTPA  341 (367)
T ss_pred             HHHHhccCCCCCCCcEEEeCCCccHHHHHHHHHHHcCCCCCcCCCch-------------------hh-------cCCcc
Confidence            9999852   3567885578889999999999999987655432221                   00       00122


Q ss_pred             cceechHHHHHhcCCCCC-CHH
Q 019878          296 QWAYSCVKAKTELGYNPR-SLK  316 (334)
Q Consensus       296 ~~~~d~~k~~~~lG~~p~-~~~  316 (334)
                      .+..|++|++++|||+|+ .++
T Consensus       342 ~~~~d~~kl~~~l~~~~~~~~~  363 (367)
T PLN02686        342 RFELSNKKLSRLMSRTRRCCYD  363 (367)
T ss_pred             cccccHHHHHHHHHHhhhcccc
Confidence            345699999999999997 443

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=100.00  E-value=1e-37  Score=276.87  Aligned_cols=268  Identities=19%  Similarity=0.170  Sum_probs=204.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCCCC---CCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGL---PSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~---~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      |+||||||+||||+++++.|+++|  ++|++++|+......+   ....+++++.+|++|.+.+.++++++|+|||+||.
T Consensus         5 k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~Ag~   84 (324)
T TIGR03589         5 KSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAAAL   84 (324)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECccc
Confidence            579999999999999999999986  7899998875432111   01136899999999999999999999999999997


Q ss_pred             cCC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHH
Q 019878           76 VEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIA  153 (334)
Q Consensus        76 ~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~  153 (334)
                      ...  ...++...+++|+.++.+++++|.+. ++++||++||...+                 .|.++|+.+|.++|.++
T Consensus        85 ~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~-~~~~iV~~SS~~~~-----------------~p~~~Y~~sK~~~E~l~  146 (324)
T TIGR03589        85 KQVPAAEYNPFECIRTNINGAQNVIDAAIDN-GVKRVVALSTDKAA-----------------NPINLYGATKLASDKLF  146 (324)
T ss_pred             CCCchhhcCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCCC-----------------CCCCHHHHHHHHHHHHH
Confidence            432  33455678999999999999999997 68899999995321                 11377999999999998


Q ss_pred             HHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCCCC
Q 019878          154 LQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGE  229 (334)
Q Consensus       154 ~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g~  229 (334)
                      +.+.    .+|++++++||+++|||+.    ++++.+......+..+...+++++.|+|+|++|+++++..++++...++
T Consensus       147 ~~~~~~~~~~gi~~~~lR~g~v~G~~~----~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~~~~~~  222 (324)
T TIGR03589       147 VAANNISGSKGTRFSVVRYGNVVGSRG----SVVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLERMLGGE  222 (324)
T ss_pred             HHHHhhccccCcEEEEEeecceeCCCC----CcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhhCCCCC
Confidence            7743    3589999999999999863    3455444444455423334567888999999999999999998765678


Q ss_pred             eEEecCCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhcC
Q 019878          230 RYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELG  309 (334)
Q Consensus       230 ~~~i~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG  309 (334)
                      +|+.+++..++.|+++.+.+.....  ...                     . .+...      ......|++|++++||
T Consensus       223 ~~~~~~~~~sv~el~~~i~~~~~~~--~~~---------------------~-~~g~~------~~~~~~~~~~~~~~lg  272 (324)
T TIGR03589       223 IFVPKIPSMKITDLAEAMAPECPHK--IVG---------------------I-RPGEK------LHEVMITEDDARHTYE  272 (324)
T ss_pred             EEccCCCcEEHHHHHHHHHhhCCee--EeC---------------------C-CCCch------hHhhhcChhhhhhhcC
Confidence            8865677899999999999854321  100                     0 00000      0112369999999999


Q ss_pred             CCCC-CHHHHHH
Q 019878          310 YNPR-SLKEGLQ  320 (334)
Q Consensus       310 ~~p~-~~~e~i~  320 (334)
                      |+|+ ++++++.
T Consensus       273 ~~~~~~l~~~~~  284 (324)
T TIGR03589       273 LGDYYAILPSIS  284 (324)
T ss_pred             CCCeEEEccccc
Confidence            9999 9999985

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK07201 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-36  Score=294.36  Aligned_cols=323  Identities=22%  Similarity=0.257  Sum_probs=237.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHH--hCCCeEEEEEcCCCCCC--CC---CCCCCeEEEEcCCCCh------hhHHHHhcCCC
Q 019878            1 MKILVSGASGYLGGRLCHALL--KQGHSVRALVRRTSDIS--GL---PSEGALELVYGDVTDY------RSLVDACFGCH   67 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~--~~g~~V~~~~r~~~~~~--~~---~~~~~v~~~~~Dl~d~------~~~~~~~~~~d   67 (334)
                      |+|||||||||||++|++.|+  +.|++|++++|+.....  .+   ...++++++.+|++|+      +.+.++ .++|
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D   79 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDID   79 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCC
Confidence            899999999999999999999  57899999999653211  00   0113689999999984      345555 8899


Q ss_pred             EEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHH
Q 019878           68 VIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (334)
Q Consensus        68 ~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~  147 (334)
                      +||||||..... .......++|+.++.+++++|++. ++++|||+||..+||..... .+|+....+..+.++|+.+|+
T Consensus        80 ~Vih~Aa~~~~~-~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~~SS~~v~g~~~~~-~~e~~~~~~~~~~~~Y~~sK~  156 (657)
T PRK07201         80 HVVHLAAIYDLT-ADEEAQRAANVDGTRNVVELAERL-QAATFHHVSSIAVAGDYEGV-FREDDFDEGQGLPTPYHRTKF  156 (657)
T ss_pred             EEEECceeecCC-CCHHHHHHHHhHHHHHHHHHHHhc-CCCeEEEEeccccccCccCc-cccccchhhcCCCCchHHHHH
Confidence            999999975432 344567889999999999999997 68999999999999865443 333333333334578999999


Q ss_pred             HHHHHHHHHhhcCCCEEEEecCceecCCCCCch------hHHHHHHHHHHc-CCCCccccCCCCceeeeeHHHHHHHHHH
Q 019878          148 VADKIALQAASEGLPIVPVYPGVIYGPGKLTTG------NLVAKLMIERFN-GRLPGYIGYGNDRFSFCHVDDVVDGHIA  220 (334)
Q Consensus       148 ~~E~~~~~~~~~g~~~~ilR~~~v~G~~~~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~a~a~~~  220 (334)
                      ++|+++++  ..|++++++||+++||+...+..      .++...+..... .......+.+...++++|++|+++++..
T Consensus       157 ~~E~~~~~--~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~  234 (657)
T PRK07201        157 EAEKLVRE--ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDH  234 (657)
T ss_pred             HHHHHHHH--cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHH
Confidence            99999875  35899999999999998643211      112222322211 1112234556677899999999999999


Q ss_pred             HhhcCC-CCCeEEec-CCCCCHHHHHHHHHHHhCCCC---CcccccHHHHHHHHHHHHHHHH---HhCCCCCCCHHHHHH
Q 019878          221 AMEKGR-SGERYLLT-GENASFMQIFDMAAVITGTSR---PRFCIPLWLIEAYGWILVFFSR---ITGKLPLISYPTVHV  292 (334)
Q Consensus       221 ~~~~~~-~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~  292 (334)
                      ++..+. .|++||++ ++.+|+.|+++.+.+.+|.+.   +...+|.++......+......   .......+.+.....
T Consensus       235 ~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  314 (657)
T PRK07201        235 LMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFGFLPGFVAAPLLAALGPVRRLRNAVATQLGIPPEVLDF  314 (657)
T ss_pred             HhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCccccccccCChHHHHHHhhhcchhhHHHHHHHHhcCCCHHHHHh
Confidence            987654 58899997 478999999999999999887   6777888876665542111111   111222344566677


Q ss_pred             hhccceechHHHHHhc---CCCCCCHHHHHHHHHHHHHhc
Q 019878          293 LAHQWAYSCVKAKTEL---GYNPRSLKEGLQEVLPWLRSS  329 (334)
Q Consensus       293 ~~~~~~~d~~k~~~~l---G~~p~~~~e~i~~~~~~~~~~  329 (334)
                      ......+|+++++++|   |++...+++.+.+++.||.++
T Consensus       315 ~~~~~~f~~~~~~~~L~~~~~~~p~~~~~~~~~~~~~~~~  354 (657)
T PRK07201        315 VNYPTTFDSRETRAALKGSGIEVPRLASYAPRLWDYWERH  354 (657)
T ss_pred             ccCCCeeccHHHHHHhccCCcCCCChHHHHHHHHHHHHhc
Confidence            7777889999999988   666668999999999988765

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=100.00  E-value=6.4e-38  Score=266.55  Aligned_cols=228  Identities=31%  Similarity=0.491  Sum_probs=195.1

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcC--CCEEEEeccccC--C
Q 019878            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAALVE--P   78 (334)
Q Consensus         3 ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vih~a~~~~--~   78 (334)
                      |||||||||||++++++|+++|++|+.+.|+...........+++++.+|+.|.+.+.+++++  +|+|||+|+...  .
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSSNPE   80 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSSHHH
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeeccccccc
Confidence            799999999999999999999999999999877543211112689999999999999999986  599999999742  2


Q ss_pred             CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHhh
Q 019878           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS  158 (334)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~  158 (334)
                      ...++...++.|+.++.+++++|++. ++++||++||..+|+.....+.+|+.+..+   .++|+.+|..+|++++.+.+
T Consensus        81 ~~~~~~~~~~~n~~~~~~ll~~~~~~-~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~---~~~Y~~~K~~~e~~~~~~~~  156 (236)
T PF01370_consen   81 SFEDPEEIIEANVQGTRNLLEAAREA-GVKRFIFLSSASVYGDPDGEPIDEDSPINP---LSPYGASKRAAEELLRDYAK  156 (236)
T ss_dssp             HHHSHHHHHHHHHHHHHHHHHHHHHH-TTSEEEEEEEGGGGTSSSSSSBETTSGCCH---SSHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccc-cccccccccccccccccccccccccccccc---cccccccccccccccccccc
Confidence            22466788999999999999999998 679999999999999886666666665543   58899999999999999875


Q ss_pred             -cCCCEEEEecCceecCC--CCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC-CCCeEEec
Q 019878          159 -EGLPIVPVYPGVIYGPG--KLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR-SGERYLLT  234 (334)
Q Consensus       159 -~g~~~~ilR~~~v~G~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-~g~~~~i~  234 (334)
                       ++++++++||+.+|||+  .....+++..++.+...+++..+++++++.|+|+|++|+|+++..+++++. .+++||++
T Consensus       157 ~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~yNig  236 (236)
T PF01370_consen  157 KYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAAGGIYNIG  236 (236)
T ss_dssp             HHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTTTEEEEES
T ss_pred             ccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence             59999999999999998  122356778888888888888889999999999999999999999999988 79999985

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=100.00  E-value=6.6e-36  Score=262.31  Aligned_cols=283  Identities=20%  Similarity=0.226  Sum_probs=204.0

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCC---
Q 019878            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPW---   79 (334)
Q Consensus         3 ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~---   79 (334)
                      |||||||||||+++++.|+++|++|++++|++.+......   ..+  .|+.. ..+.+.+.++|+|||+|+.....   
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~--~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~~~~   74 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW---EGY--KPWAP-LAESEALEGADAVINLAGEPIADKRW   74 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc---eee--ecccc-cchhhhcCCCCEEEECCCCCcccccC
Confidence            6999999999999999999999999999998876543221   111  13222 44566778899999999964321   


Q ss_pred             -CCCcccchhhhhHHHHHHHHHHHhcCCC--cEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHH
Q 019878           80 -LPDPSRFFAVNVEGLKNVVQAAKETKTV--EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (334)
Q Consensus        80 -~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~  156 (334)
                       ..++..++++|+.++++++++|+++ ++  .+||++||..+||.....+.+|+.+..+   .+.|+..+...|..+..+
T Consensus        75 ~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~---~~~~~~~~~~~e~~~~~~  150 (292)
T TIGR01777        75 TEERKQEIRDSRIDTTRALVEAIAAA-EQKPKVFISASAVGYYGTSEDRVFTEEDSPAG---DDFLAELCRDWEEAAQAA  150 (292)
T ss_pred             CHHHHHHHHhcccHHHHHHHHHHHhc-CCCceEEEEeeeEEEeCCCCCCCcCcccCCCC---CChHHHHHHHHHHHhhhc
Confidence             1133467789999999999999998 45  3677778888999766556666653322   245677777777776655


Q ss_pred             hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCCCCeEEec-C
Q 019878          157 ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLT-G  235 (334)
Q Consensus       157 ~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g~~~~i~-g  235 (334)
                      .+.+++++++||+.+|||+..    ....++.. ........++++++.++|+|++|+|+++..+++++..+++||++ +
T Consensus       151 ~~~~~~~~ilR~~~v~G~~~~----~~~~~~~~-~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~~g~~~~~~~  225 (292)
T TIGR01777       151 EDLGTRVVLLRTGIVLGPKGG----ALAKMLPP-FRLGLGGPLGSGRQWFSWIHIEDLVQLILFALENASISGPVNATAP  225 (292)
T ss_pred             hhcCCceEEEeeeeEECCCcc----hhHHHHHH-HhcCcccccCCCCcccccEeHHHHHHHHHHHhcCcccCCceEecCC
Confidence            556899999999999999642    22222211 11111112577889999999999999999999886666799996 5


Q ss_pred             CCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhcCCCCC--
Q 019878          236 ENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPR--  313 (334)
Q Consensus       236 ~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~--  313 (334)
                      +.+|+.|+++.+.+..|.+.+ ..+|.|..+..          .+..+       .....+..++++|+++ +||+|.  
T Consensus       226 ~~~s~~di~~~i~~~~g~~~~-~~~p~~~~~~~----------~~~~~-------~~~~~~~~~~~~~~~~-~g~~~~~~  286 (292)
T TIGR01777       226 EPVRNKEFAKALARALHRPAF-FPVPAFVLRAL----------LGEMA-------DLLLKGQRVLPEKLLE-AGFQFQYP  286 (292)
T ss_pred             CccCHHHHHHHHHHHhCCCCc-CcCCHHHHHHH----------hchhh-------HHHhCCcccccHHHHh-cCCeeeCc
Confidence            779999999999999997654 45888775532          11111       1234466679999985 999999  


Q ss_pred             CHHHHH
Q 019878          314 SLKEGL  319 (334)
Q Consensus       314 ~~~e~i  319 (334)
                      +++|++
T Consensus       287 ~~~~~~  292 (292)
T TIGR01777       287 DLDEAL  292 (292)
T ss_pred             ChhhcC
Confidence            688763

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02996 fatty acyl-CoA reductase

Probab=100.00  E-value=1.4e-35  Score=274.92  Aligned_cols=253  Identities=21%  Similarity=0.244  Sum_probs=194.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC---CeEEEEEcCCCCCCC-------CC--------------C-----CCCeEEEEc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG---HSVRALVRRTSDISG-------LP--------------S-----EGALELVYG   51 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~-------~~--------------~-----~~~v~~~~~   51 (334)
                      ++|||||||||||++|++.|++.+   .+|+++.|..+....       +.              .     .++++++.|
T Consensus        12 k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~G   91 (491)
T PLN02996         12 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVPG   91 (491)
T ss_pred             CeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEec
Confidence            469999999999999999999754   368999997653210       00              0     147899999


Q ss_pred             CCC-------ChhhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCC
Q 019878           52 DVT-------DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG  124 (334)
Q Consensus        52 Dl~-------d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~  124 (334)
                      |++       +.+.+.++++++|+|||+|+.+... .++....++|+.|+.+++++|++..++++|||+||.+|||...+
T Consensus        92 Dl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~~~  170 (491)
T PLN02996         92 DISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFD-ERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEKSG  170 (491)
T ss_pred             ccCCcCCCCChHHHHHHHHhCCCEEEECccccCCc-CCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCCCc
Confidence            998       4455677888999999999987643 46677889999999999999998756889999999999986442


Q ss_pred             ccCCCCCccc-------------------------------------------------cccccChHHHHHHHHHHHHHH
Q 019878          125 YIADENQVHE-------------------------------------------------EKYFCTQYERSKAVADKIALQ  155 (334)
Q Consensus       125 ~~~~e~~~~~-------------------------------------------------~~~~~~~Y~~sK~~~E~~~~~  155 (334)
                      . .+|...++                                                 ...+.++|+.||+++|+++..
T Consensus       171 ~-i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~  249 (491)
T PLN02996        171 L-ILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGN  249 (491)
T ss_pred             e-eeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHHH
Confidence            1 11111000                                                 011347899999999999988


Q ss_pred             HhhcCCCEEEEecCceecCCCCCchhHH------HHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcC----
Q 019878          156 AASEGLPIVPVYPGVIYGPGKLTTGNLV------AKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG----  225 (334)
Q Consensus       156 ~~~~g~~~~ilR~~~v~G~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~----  225 (334)
                      +. .|++++++||++|||++..+..+++      ..++.....|....+++++++.+|++||+|++++++.++.+.    
T Consensus       250 ~~-~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~~  328 (491)
T PLN02996        250 FK-ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAGGQ  328 (491)
T ss_pred             hc-CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhhccC
Confidence            65 4899999999999999765443332      334444556777778899999999999999999999998753    


Q ss_pred             CCCCeEEec-C--CCCCHHHHHHHHHHHhCCCCC
Q 019878          226 RSGERYLLT-G--ENASFMQIFDMAAVITGTSRP  256 (334)
Q Consensus       226 ~~g~~~~i~-g--~~~s~~e~~~~i~~~~g~~~~  256 (334)
                      ..+.+||++ |  +++|+.|+++.+.+..+..+.
T Consensus       329 ~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p~  362 (491)
T PLN02996        329 GSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNPW  362 (491)
T ss_pred             CCCcEEEecCCCCCcccHHHHHHHHHHHhhhCCC
Confidence            246799996 6  578999999999988875443

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=1.7e-35  Score=233.82  Aligned_cols=285  Identities=21%  Similarity=0.227  Sum_probs=223.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC--eEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc--CCCEEEEecccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALV   76 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vih~a~~~   76 (334)
                      |||||||++|.+|+++.+.+.++|.  +--++.-+               -.+||++.++.+++++  ++..|||+|+++
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s---------------kd~DLt~~a~t~~lF~~ekPthVIhlAAmV   66 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS---------------KDADLTNLADTRALFESEKPTHVIHLAAMV   66 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc---------------ccccccchHHHHHHHhccCCceeeehHhhh
Confidence            6899999999999999999999875  21222112               2369999999999986  499999999996


Q ss_pred             CC---CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCcccc--ccccChHHHHHHHHHH
Q 019878           77 EP---WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEE--KYFCTQYERSKAVADK  151 (334)
Q Consensus        77 ~~---~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~--~~~~~~Y~~sK~~~E~  151 (334)
                      ..   +...+..++..|+..-.|++..|.++ +++++|++.|+++|......|.+|+.....  .+-.-.|+..|+++.-
T Consensus        67 GGlf~N~~ynldF~r~Nl~indNVlhsa~e~-gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~idv  145 (315)
T KOG1431|consen   67 GGLFHNNTYNLDFIRKNLQINDNVLHSAHEH-GVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKRMIDV  145 (315)
T ss_pred             cchhhcCCCchHHHhhcceechhHHHHHHHh-chhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHHHHHH
Confidence            54   44556789999999999999999998 799999999999999998899998875332  2223468888998888


Q ss_pred             HHHHHh-hcCCCEEEEecCceecCCCCCc---hhHHHHHHHH----HHcCC-CCccccCCCCceeeeeHHHHHHHHHHHh
Q 019878          152 IALQAA-SEGLPIVPVYPGVIYGPGKLTT---GNLVAKLMIE----RFNGR-LPGYIGYGNDRFSFCHVDDVVDGHIAAM  222 (334)
Q Consensus       152 ~~~~~~-~~g~~~~ilR~~~v~G~~~~~~---~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~i~v~D~a~a~~~~~  222 (334)
                      ..+.|. ++|-.++.+-|+++|||.++.+   +..++.++.+    ...|. ...+||.|..+|+|+|++|+|+++++++
T Consensus       146 ~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~vl  225 (315)
T KOG1431|consen  146 QNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFIWVL  225 (315)
T ss_pred             HHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHHHHH
Confidence            778877 4799999999999999976532   2334444433    33455 6788999999999999999999999999


Q ss_pred             hcCCCCCeEEec-CC--CCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhcccee
Q 019878          223 EKGRSGERYLLT-GE--NASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAY  299 (334)
Q Consensus       223 ~~~~~g~~~~i~-g~--~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (334)
                      ++...-+..+++ |+  .+|++|+++.+.++.+...+..--                  ..+.. .        ......
T Consensus       226 r~Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~~D------------------ttK~D-G--------q~kKta  278 (315)
T KOG1431|consen  226 REYEGVEPIILSVGESDEVTIREAAEAVVEAVDFTGKLVWD------------------TTKSD-G--------QFKKTA  278 (315)
T ss_pred             HhhcCccceEeccCccceeEHHHHHHHHHHHhCCCceEEee------------------ccCCC-C--------Cccccc
Confidence            988777777885 76  699999999999999987554210                  01110 0        111236


Q ss_pred             chHHHHHhcCCCCC--CHHHHHHHHHHHHHhc
Q 019878          300 SCVKAKTELGYNPR--SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       300 d~~k~~~~lG~~p~--~~~e~i~~~~~~~~~~  329 (334)
                      |++|++. |+|.|+  +++++|.++++||.++
T Consensus       279 snsKL~s-l~pd~~ft~l~~ai~~t~~Wy~~N  309 (315)
T KOG1431|consen  279 SNSKLRS-LLPDFKFTPLEQAISETVQWYLDN  309 (315)
T ss_pred             chHHHHH-hCCCcccChHHHHHHHHHHHHHHh
Confidence            9999996 899988  6999999999999876

>PRK05865 hypothetical protein; Provisional

Probab=100.00  E-value=1.6e-34  Score=277.67  Aligned_cols=256  Identities=24%  Similarity=0.310  Sum_probs=194.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~   80 (334)
                      |||||||||||||++++++|+++|++|++++|+....  ..  .+++++.+|++|.+.+.++++++|+|||+|+...   
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~--~~--~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~---   73 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS--WP--SSADFIAADIRDATAVESAMTGADVVAHCAWVRG---   73 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh--cc--cCceEEEeeCCCHHHHHHHHhCCCEEEECCCccc---
Confidence            8999999999999999999999999999999975421  11  2688999999999999999999999999998532   


Q ss_pred             CCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHhhcC
Q 019878           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEG  160 (334)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g  160 (334)
                          ..+++|+.++.+++++|++. ++++||++||..                            |.++|+++.+   +|
T Consensus        74 ----~~~~vNv~GT~nLLeAa~~~-gvkr~V~iSS~~----------------------------K~aaE~ll~~---~g  117 (854)
T PRK05865         74 ----RNDHINIDGTANVLKAMAET-GTGRIVFTSSGH----------------------------QPRVEQMLAD---CG  117 (854)
T ss_pred             ----chHHHHHHHHHHHHHHHHHc-CCCeEEEECCcH----------------------------HHHHHHHHHH---cC
Confidence                15689999999999999998 689999999842                            7888987765   68


Q ss_pred             CCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC-CCCeEEec-CCCC
Q 019878          161 LPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR-SGERYLLT-GENA  238 (334)
Q Consensus       161 ~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-~g~~~~i~-g~~~  238 (334)
                      ++++++||+++|||+.   ..+    +.... .......+.+++.++|+|++|+|+++..+++++. .+++||++ ++.+
T Consensus       118 l~~vILRp~~VYGP~~---~~~----i~~ll-~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgsg~~~  189 (854)
T PRK05865        118 LEWVAVRCALIFGRNV---DNW----VQRLF-ALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPVNLAAPGEL  189 (854)
T ss_pred             CCEEEEEeceEeCCCh---HHH----HHHHh-cCceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeEEEECCCcc
Confidence            9999999999999962   122    22222 1222223455667899999999999999987543 57799996 5779


Q ss_pred             CHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhcCCCCC-CHHH
Q 019878          239 SFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKE  317 (334)
Q Consensus       239 s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~-~~~e  317 (334)
                      |+.|+++.+.+...      .++.+.....           +.     ............+|++|+++.|||+|+ ++++
T Consensus       190 Si~EIae~l~~~~~------~v~~~~~~~~-----------~~-----~~~~~~~~~~~~~D~sKar~~LGw~P~~sLee  247 (854)
T PRK05865        190 TFRRIAAALGRPMV------PIGSPVLRRV-----------TS-----FAELELLHSAPLMDVTLLRDRWGFQPAWNAEE  247 (854)
T ss_pred             cHHHHHHHHhhhhc------cCCchhhhhc-----------cc-----hhhhhcccCCccCCHHHHHHHhCCCCCCCHHH
Confidence            99999998876431      1111110000           00     000011122335799999999999999 9999


Q ss_pred             HHHHHHHHHHhc
Q 019878          318 GLQEVLPWLRSS  329 (334)
Q Consensus       318 ~i~~~~~~~~~~  329 (334)
                      +|+++++||+.+
T Consensus       248 GL~dti~~~r~r  259 (854)
T PRK05865        248 CLEDFTLAVRGR  259 (854)
T ss_pred             HHHHHHHHHHhh
Confidence            999999999764

>PLN02583 cinnamoyl-CoA reductase

Probab=100.00  E-value=9.5e-34  Score=248.63  Aligned_cols=241  Identities=27%  Similarity=0.363  Sum_probs=180.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC------CCCC-CCCCeEEEEcCCCChhhHHHHhcCCCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI------SGLP-SEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~------~~~~-~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a   73 (334)
                      ++|||||||||||+++++.|+++|++|+++.|+....      ..+. ...+++++.+|++|.+.+.+++.++|.|+|++
T Consensus         7 k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~~~   86 (297)
T PLN02583          7 KSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFCCF   86 (297)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEEeC
Confidence            3699999999999999999999999999999864321      1111 11368899999999999999999999999988


Q ss_pred             cccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccC-----CCccCCCCCccccc---cccChHHHH
Q 019878           74 ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST-----DGYIADENQVHEEK---YFCTQYERS  145 (334)
Q Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~-----~~~~~~e~~~~~~~---~~~~~Y~~s  145 (334)
                      +.......+...++++|+.++.+++++|.+..+++|+|++||..+++..     ...+.+|+++.++.   .+...|+.|
T Consensus        87 ~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~s  166 (297)
T PLN02583         87 DPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHALA  166 (297)
T ss_pred             ccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHHHH
Confidence            6543222335678999999999999999987557899999998765311     12345555443221   112379999


Q ss_pred             HHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhc
Q 019878          146 KAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEK  224 (334)
Q Consensus       146 K~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~  224 (334)
                      |.++|+.++.+.+ +|++++++||++||||+.....    .    .+.+... ..+  ...++||||+|+|++++.+++.
T Consensus       167 K~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~----~----~~~~~~~-~~~--~~~~~~v~V~Dva~a~~~al~~  235 (297)
T PLN02583        167 KTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN----P----YLKGAAQ-MYE--NGVLVTVDVNFLVDAHIRAFED  235 (297)
T ss_pred             HHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch----h----hhcCCcc-cCc--ccCcceEEHHHHHHHHHHHhcC
Confidence            9999999998874 6999999999999999764211    1    1222222 222  2356899999999999999998


Q ss_pred             CCCCCeEEecCCCCC-HHHHHHHHHHHhC
Q 019878          225 GRSGERYLLTGENAS-FMQIFDMAAVITG  252 (334)
Q Consensus       225 ~~~g~~~~i~g~~~s-~~e~~~~i~~~~g  252 (334)
                      +..++.|+++++..+ ..++++++.+...
T Consensus       236 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~p  264 (297)
T PLN02583        236 VSSYGRYLCFNHIVNTEEDAVKLAQMLSP  264 (297)
T ss_pred             cccCCcEEEecCCCccHHHHHHHHHHhCC
Confidence            777778999877655 5778888887643

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=3.8e-33  Score=228.11  Aligned_cols=309  Identities=22%  Similarity=0.221  Sum_probs=239.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC-------CC--CCCCeEEEEcCCCChhhHHHHhcC--CCEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-------LP--SEGALELVYGDVTDYRSLVDACFG--CHVIF   70 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~--~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vi   70 (334)
                      +.||||.||+-|++|++.|+++||.|+++.|+.+....       .+  ...+++++.+||+|...+.++++.  +|.|+
T Consensus         4 ~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdEIY   83 (345)
T COG1089           4 VALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDEIY   83 (345)
T ss_pred             eEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCchhhe
Confidence            48999999999999999999999999999997543221       11  113588999999999999999975  99999


Q ss_pred             Eeccc--cCCCCCCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEecccceeccCCCccCCCCCccccccccChHHHHHH
Q 019878           71 HTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (334)
Q Consensus        71 h~a~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~  147 (334)
                      |+|+.  +..+.++|+...+++-.|+.+|+++.+..+. -.||.+.||+..||.....+..|.++.-|   .|||+.+|.
T Consensus        84 NLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyP---rSPYAvAKl  160 (345)
T COG1089          84 NLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYP---RSPYAVAKL  160 (345)
T ss_pred             eccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCC---CCHHHHHHH
Confidence            99997  4557789999999999999999999999853 35899999999999998888888877655   699999999


Q ss_pred             HHHHHHHHHhh-cCCCEEEEecCceecCCC--CCchhHHHHHHHHHHcCCCC-ccccCCCCceeeeeHHHHHHHHHHHhh
Q 019878          148 VADKIALQAAS-EGLPIVPVYPGVIYGPGK--LTTGNLVAKLMIERFNGRLP-GYIGYGNDRFSFCHVDDVVDGHIAAME  223 (334)
Q Consensus       148 ~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~D~a~a~~~~~~  223 (334)
                      .+--+...+.+ +|+-++.-+..+--+|..  ....+-+...+.+...|..- ...|+-+..|||-|+.|.++++.++++
T Consensus       161 Ya~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlmLQ  240 (345)
T COG1089         161 YAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLMLQ  240 (345)
T ss_pred             HHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHHHHc
Confidence            99988888775 799999988888888754  22334455555555555443 345888999999999999999999999


Q ss_pred             cCCCCCeEEe-cCCCCCHHHHHHHHHHHhCCCCCccc--ccHHHHHHHHHHHHHHHHHhCC------CCCCCHHHHHHhh
Q 019878          224 KGRSGERYLL-TGENASFMQIFDMAAVITGTSRPRFC--IPLWLIEAYGWILVFFSRITGK------LPLISYPTVHVLA  294 (334)
Q Consensus       224 ~~~~g~~~~i-~g~~~s~~e~~~~i~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~  294 (334)
                      ++. ..-|++ +|+..|++|++++..+.+|.+..+..  +...-.          ....|+      ...+.|...+.+ 
T Consensus       241 q~~-PddyViATg~t~sVrefv~~Af~~~g~~l~w~g~g~~e~g~----------da~~G~~~V~idp~~fRPaEV~~L-  308 (345)
T COG1089         241 QEE-PDDYVIATGETHSVREFVELAFEMVGIDLEWEGTGVDEKGV----------DAKTGKIIVEIDPRYFRPAEVDLL-  308 (345)
T ss_pred             cCC-CCceEEecCceeeHHHHHHHHHHHcCceEEEeecccccccc----------ccccCceeEEECccccCchhhhhh-
Confidence            876 457777 69999999999999999996654320  000000          000011      112233333332 


Q ss_pred             ccceechHHHHHhcCCCCC-CHHHHHHHHHHHHHh
Q 019878          295 HQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRS  328 (334)
Q Consensus       295 ~~~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~  328 (334)
                         .-|++|+++.|||+|+ ++++.+++|+++-.+
T Consensus       309 ---lgdp~KA~~~LGW~~~~~~~elv~~Mv~~dl~  340 (345)
T COG1089         309 ---LGDPTKAKEKLGWRPEVSLEELVREMVEADLE  340 (345)
T ss_pred             ---cCCHHHHHHHcCCccccCHHHHHHHHHHHHHH
Confidence               3489999999999999 999999999998765

>TIGR01746 Thioester-redct thioester reductase domain

Probab=100.00  E-value=2.6e-33  Score=253.55  Aligned_cols=326  Identities=21%  Similarity=0.240  Sum_probs=222.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCC---C---------C---CCC-CCeEEEEcCCCCh------h
Q 019878            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDIS---G---------L---PSE-GALELVYGDVTDY------R   57 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~---~---------~---~~~-~~v~~~~~Dl~d~------~   57 (334)
                      +|||||||||||++|++.|+++|  ++|+++.|+.+...   .         +   ... ++++++.+|++++      +
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            68999999999999999999998  67999999865210   0         0   000 3799999999754      4


Q ss_pred             hHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCcc--cc
Q 019878           58 SLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVH--EE  135 (334)
Q Consensus        58 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~--~~  135 (334)
                      .+..+..++|+|||+|+..... .....+.+.|+.++.+++++|.+. ++++||++||.++|+........++...  ..
T Consensus        81 ~~~~~~~~~d~vih~a~~~~~~-~~~~~~~~~nv~g~~~ll~~a~~~-~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~  158 (367)
T TIGR01746        81 EWERLAENVDTIVHNGALVNWV-YPYSELRAANVLGTREVLRLAASG-RAKPLHYVSTISVLAAIDLSTVTEDDAIVTPP  158 (367)
T ss_pred             HHHHHHhhCCEEEeCCcEeccC-CcHHHHhhhhhHHHHHHHHHHhhC-CCceEEEEccccccCCcCCCCccccccccccc
Confidence            5666777899999999976532 344567789999999999999997 6788999999999986543222222221  11


Q ss_pred             ccccChHHHHHHHHHHHHHHHhhcCCCEEEEecCceecCCCCC---chhHHHHHHHHHHcCCCCccccCCCCceeeeeHH
Q 019878          136 KYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLT---TGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVD  212 (334)
Q Consensus       136 ~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~ilR~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  212 (334)
                      ..+.+.|+.+|+++|.+++.+.+.|++++++||+.+||+...+   ...++..++......+.  ++.......+|+|++
T Consensus       159 ~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~--~p~~~~~~~~~~~vd  236 (367)
T TIGR01746       159 PGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGA--YPDSPELTEDLTPVD  236 (367)
T ss_pred             cccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCC--CCCCCccccCcccHH
Confidence            2234689999999999999887779999999999999974321   22344444444333221  122222367899999


Q ss_pred             HHHHHHHHHhhcCCC---CCeEEecC-CCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHH-HhCCCCCCCH
Q 019878          213 DVVDGHIAAMEKGRS---GERYLLTG-ENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSR-ITGKLPLISY  287 (334)
Q Consensus       213 D~a~a~~~~~~~~~~---g~~~~i~g-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  287 (334)
                      |+++++..++..+..   +++||+++ +.+++.|+++.+.+ .|.+.+..+.+.|+..+.......... ..+..+.+..
T Consensus       237 dva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~  315 (367)
T TIGR01746       237 YVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNLKLVSFDEWLQRLEDSDTAKRDPPRYPLLPLLHF  315 (367)
T ss_pred             HHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCCCcCCHHHHHHHHHHhhhcCCCcccccchhhhhc
Confidence            999999999877653   78999975 78999999999999 898888888888877654322100000 0000000000


Q ss_pred             ---HHHHHhhccceechHHHHH---hcCCCCC-CHHHHHHHHHHHHHhcCCC
Q 019878          288 ---PTVHVLAHQWAYSCVKAKT---ELGYNPR-SLKEGLQEVLPWLRSSGMI  332 (334)
Q Consensus       288 ---~~~~~~~~~~~~d~~k~~~---~lG~~p~-~~~e~i~~~~~~~~~~~~~  332 (334)
                         ...........+++++.++   .+|.... --++.++++++++...+++
T Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (367)
T TIGR01746       316 LGAGFEEPEFDTRNLDSRSTAEALEGDGIREPSITAPLLHLYLQYLKEIGFL  367 (367)
T ss_pred             cCCCcccccccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHcCCC
Confidence               0000001122456665543   3455554 5668899999999887754

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=100.00  E-value=4.6e-33  Score=252.07  Aligned_cols=249  Identities=20%  Similarity=0.241  Sum_probs=200.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC-------CCCCCCeEEEEcCCCChhhHHHHhc----CCCEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-------LPSEGALELVYGDVTDYRSLVDACF----GCHVI   69 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~~v~~~~~Dl~d~~~~~~~~~----~~d~v   69 (334)
                      |+|||||||||||+++++.|+++|++|++++|+......       ....++++++.+|++|.+.+.++++    ++|+|
T Consensus        61 ~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~D~V  140 (390)
T PLN02657         61 VTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPVDVV  140 (390)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCCcEE
Confidence            689999999999999999999999999999998754321       0112378999999999999999987    59999


Q ss_pred             EEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHH
Q 019878           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVA  149 (334)
Q Consensus        70 ih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~  149 (334)
                      |||++....   .....+++|+.++.+++++|++. ++++||++||.+++++                 ...|..+|...
T Consensus       141 i~~aa~~~~---~~~~~~~vn~~~~~~ll~aa~~~-gv~r~V~iSS~~v~~p-----------------~~~~~~sK~~~  199 (390)
T PLN02657        141 VSCLASRTG---GVKDSWKIDYQATKNSLDAGREV-GAKHFVLLSAICVQKP-----------------LLEFQRAKLKF  199 (390)
T ss_pred             EECCccCCC---CCccchhhHHHHHHHHHHHHHHc-CCCEEEEEeeccccCc-----------------chHHHHHHHHH
Confidence            999874221   22355788999999999999998 7899999999887632                 24588999999


Q ss_pred             HHHHHHHhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCce-eeeeHHHHHHHHHHHhhcCC-C
Q 019878          150 DKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRF-SFCHVDDVVDGHIAAMEKGR-S  227 (334)
Q Consensus       150 E~~~~~~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~v~D~a~a~~~~~~~~~-~  227 (334)
                      |+.+.. ...+++++++||+.+||+.    .    ..+.....+++..++|+++..+ ++||++|+|+++..++..+. .
T Consensus       200 E~~l~~-~~~gl~~tIlRp~~~~~~~----~----~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~~  270 (390)
T PLN02657        200 EAELQA-LDSDFTYSIVRPTAFFKSL----G----GQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDESKI  270 (390)
T ss_pred             HHHHHh-ccCCCCEEEEccHHHhccc----H----HHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCcccc
Confidence            998876 3468999999999999752    1    2233444666666778887765 67999999999999987653 5


Q ss_pred             CCeEEecC--CCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHh
Q 019878          228 GERYLLTG--ENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRIT  279 (334)
Q Consensus       228 g~~~~i~g--~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (334)
                      +++||++|  +.+|+.|+++.+.+.+|++++...+|.|.+.....+.+.+..+.
T Consensus       271 ~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~~~~vp~~~~~~~~~~~~~~~~~~  324 (390)
T PLN02657        271 NKVLPIGGPGKALTPLEQGEMLFRILGKEPKFFKVPIQIMDFAIGVLDFLAKIF  324 (390)
T ss_pred             CCEEEcCCCCcccCHHHHHHHHHHHhCCCCceEEcCHHHHHHHHHHHHHhhhhC
Confidence            88999975  47999999999999999999999999999887776665554443

>PLN02778 3,5-epimerase/4-reductase

Probab=100.00  E-value=2.9e-32  Score=238.72  Aligned_cols=268  Identities=15%  Similarity=0.103  Sum_probs=190.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc--CCCEEEEeccccCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVEP   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vih~a~~~~~   78 (334)
                      ||||||||+||||++|+++|+++|++|+...                   +|+.|.+.+...+.  ++|+|||+||....
T Consensus        10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~-------------------~~~~~~~~v~~~l~~~~~D~ViH~Aa~~~~   70 (298)
T PLN02778         10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS-------------------GRLENRASLEADIDAVKPTHVFNAAGVTGR   70 (298)
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCEEEEec-------------------CccCCHHHHHHHHHhcCCCEEEECCcccCC
Confidence            8999999999999999999999999987431                   24556666666665  59999999997532


Q ss_pred             -----CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCC------CccCCCCCccccccccChHHHHHH
Q 019878           79 -----WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD------GYIADENQVHEEKYFCTQYERSKA  147 (334)
Q Consensus        79 -----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~------~~~~~e~~~~~~~~~~~~Y~~sK~  147 (334)
                           ++.++..++++|+.++.+++++|++. +++ ++++||.++|+...      +.+..|++.+.  .+.+.|+.+|.
T Consensus        71 ~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~-gv~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~--~~~s~Yg~sK~  146 (298)
T PLN02778         71 PNVDWCESHKVETIRANVVGTLTLADVCRER-GLV-LTNYATGCIFEYDDAHPLGSGIGFKEEDTPN--FTGSFYSKTKA  146 (298)
T ss_pred             CCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCC-EEEEecceEeCCCCCCCcccCCCCCcCCCCC--CCCCchHHHHH
Confidence                 34567789999999999999999998 565 56678788887432      11234333221  22478999999


Q ss_pred             HHHHHHHHHhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCC
Q 019878          148 VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRS  227 (334)
Q Consensus       148 ~~E~~~~~~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~  227 (334)
                      ++|.++..+.    +..++|+..++|++...    ...++...+.+......+     .+|+|++|+++++..++++.. 
T Consensus       147 ~~E~~~~~y~----~~~~lr~~~~~~~~~~~----~~~fi~~~~~~~~~~~~~-----~s~~yv~D~v~al~~~l~~~~-  212 (298)
T PLN02778        147 MVEELLKNYE----NVCTLRVRMPISSDLSN----PRNFITKITRYEKVVNIP-----NSMTILDELLPISIEMAKRNL-  212 (298)
T ss_pred             HHHHHHHHhh----ccEEeeecccCCccccc----HHHHHHHHHcCCCeeEcC-----CCCEEHHHHHHHHHHHHhCCC-
Confidence            9999998864    36788998888865321    122445555555443332     379999999999999997644 


Q ss_pred             CCeEEec-CCCCCHHHHHHHHHHHhCCCCCcc--cccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHH
Q 019878          228 GERYLLT-GENASFMQIFDMAAVITGTSRPRF--CIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKA  304 (334)
Q Consensus       228 g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~  304 (334)
                      +++||++ ++.+|+.|+++.+++.+|.+.++.  .++. ...            ....+          .....+|++|+
T Consensus       213 ~g~yNigs~~~iS~~el~~~i~~~~~~~~~~~~~~i~~-~~~------------~~~~~----------~~~~~Ld~~k~  269 (298)
T PLN02778        213 TGIYNFTNPGVVSHNEILEMYRDYIDPSFTWKNFTLEE-QAK------------VIVAP----------RSNNELDTTKL  269 (298)
T ss_pred             CCeEEeCCCCcccHHHHHHHHHHHhCCCceeccccHHH-HHH------------HHhCC----------CccccccHHHH
Confidence            4699995 678999999999999998653221  1110 000            00000          00114799999


Q ss_pred             HHhcCCCCCCHHHHHHHHHHHHHh
Q 019878          305 KTELGYNPRSLKEGLQEVLPWLRS  328 (334)
Q Consensus       305 ~~~lG~~p~~~~e~i~~~~~~~~~  328 (334)
                      ++.++=.+...+++++..++-++.
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~  293 (298)
T PLN02778        270 KREFPELLPIKESLIKYVFEPNKK  293 (298)
T ss_pred             HHhcccccchHHHHHHHHHHHHHh
Confidence            998877677888888888887743

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=100.00  E-value=4.1e-31  Score=216.57  Aligned_cols=285  Identities=21%  Similarity=0.286  Sum_probs=203.1

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc-CCCEEEEecccc--CC-
Q 019878            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-GCHVIFHTAALV--EP-   78 (334)
Q Consensus         3 ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-~~d~vih~a~~~--~~-   78 (334)
                      |+|||||||||++|+..|.+.||+|++++|++++....... .++       ..+.+..... ++|+|||+||..  .. 
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~-~v~-------~~~~~~~~~~~~~DavINLAG~~I~~rr   72 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHP-NVT-------LWEGLADALTLGIDAVINLAGEPIAERR   72 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCc-ccc-------ccchhhhcccCCCCEEEECCCCcccccc
Confidence            68999999999999999999999999999998865432210 111       2233445555 699999999973  22 


Q ss_pred             CCC-CcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHH
Q 019878           79 WLP-DPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (334)
Q Consensus        79 ~~~-~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~  156 (334)
                      |.+ ..+...++-+..|+.|.++..+.. ..+.+|..|.++-||+..+...+|+.+...    +.-+..=..=|+....+
T Consensus        73 Wt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~----~Fla~lc~~WE~~a~~a  148 (297)
T COG1090          73 WTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGD----DFLAQLCQDWEEEALQA  148 (297)
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCC----ChHHHHHHHHHHHHhhh
Confidence            333 345688999999999999998553 345788888888999988877777743322    22222112224444444


Q ss_pred             hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCCCCeEEecC-
Q 019878          157 ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTG-  235 (334)
Q Consensus       157 ~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g~~~~i~g-  235 (334)
                      ...|.+++++|.|+|.|+.    ++.+..++--+ +-..-..+|+|+|+.+|||++|++++|..++++..-.+.||++. 
T Consensus       149 ~~~gtRvvllRtGvVLs~~----GGaL~~m~~~f-k~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~lsGp~N~taP  223 (297)
T COG1090         149 QQLGTRVVLLRTGVVLSPD----GGALGKMLPLF-KLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQLSGPFNLTAP  223 (297)
T ss_pred             hhcCceEEEEEEEEEecCC----Ccchhhhcchh-hhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcCCCCcccccCC
Confidence            4559999999999999984    33444433222 22223356999999999999999999999999988777999975 


Q ss_pred             CCCCHHHHHHHHHHHhCCCCCcccccHHHHHHH-HHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhcCCCCC-
Q 019878          236 ENASFMQIFDMAAVITGTSRPRFCIPLWLIEAY-GWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPR-  313 (334)
Q Consensus       236 ~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~-  313 (334)
                      .+++..++...++++++++.. ..+|.+..++. +..+..                  +......=+.|+. ..||+++ 
T Consensus       224 ~PV~~~~F~~al~r~l~RP~~-~~vP~~~~rl~LGe~a~~------------------lL~gQrvlP~kl~-~aGF~F~y  283 (297)
T COG1090         224 NPVRNKEFAHALGRALHRPAI-LPVPSFALRLLLGEMADL------------------LLGGQRVLPKKLE-AAGFQFQY  283 (297)
T ss_pred             CcCcHHHHHHHHHHHhCCCcc-ccCcHHHHHHHhhhhHHH------------------HhccchhhHHHHH-HCCCeeec
Confidence            779999999999999987644 47787765543 222221                  1222223467777 4799988 


Q ss_pred             -CHHHHHHHHHH
Q 019878          314 -SLKEGLQEVLP  324 (334)
Q Consensus       314 -~~~e~i~~~~~  324 (334)
                       ++++++.+.+.
T Consensus       284 ~dl~~AL~~il~  295 (297)
T COG1090         284 PDLEEALADILK  295 (297)
T ss_pred             CCHHHHHHHHHh
Confidence             99999998874

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.98  E-value=1.3e-32  Score=232.32  Aligned_cols=229  Identities=24%  Similarity=0.334  Sum_probs=176.5

Q ss_pred             EEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCC----C---CCCCCeE----EEEcCCCChhhHHHHhc--CCCE
Q 019878            3 ILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISG----L---PSEGALE----LVYGDVTDYRSLVDACF--GCHV   68 (334)
Q Consensus         3 ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~----~---~~~~~v~----~~~~Dl~d~~~~~~~~~--~~d~   68 (334)
                      ||||||+|.||+.|+++|++.+ .+++++++++.....    +   ...+++.    .+.+|++|.+.+.++++  ++|+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            7999999999999999999987 689999998653211    1   0111343    45899999999999998  7999


Q ss_pred             EEEeccc--cCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHH
Q 019878           69 IFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (334)
Q Consensus        69 vih~a~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK  146 (334)
                      |+|+|+.  +..++.+|.+..++|+.|++|++++|.++ ++++||++||..+..+                 .+.||.||
T Consensus        81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~-~v~~~v~ISTDKAv~P-----------------tnvmGatK  142 (293)
T PF02719_consen   81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEH-GVERFVFISTDKAVNP-----------------TNVMGATK  142 (293)
T ss_dssp             EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHT-T-SEEEEEEECGCSS-------------------SHHHHHH
T ss_pred             EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEccccccCCC-----------------CcHHHHHH
Confidence            9999998  44577899999999999999999999998 7999999999766542                 37899999


Q ss_pred             HHHHHHHHHHhhc----CCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHh
Q 019878          147 AVADKIALQAASE----GLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAM  222 (334)
Q Consensus       147 ~~~E~~~~~~~~~----g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~  222 (334)
                      +.+|+++..+...    +..++++|+|+|.|.    .++.++.+..+..+|++. ...+++..|=|+.+++.++.++.+.
T Consensus       143 rlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS----~GSVip~F~~Qi~~g~Pl-TvT~p~mtRffmti~EAv~Lvl~a~  217 (293)
T PF02719_consen  143 RLAEKLVQAANQYSGNSDTKFSSVRFGNVLGS----RGSVIPLFKKQIKNGGPL-TVTDPDMTRFFMTIEEAVQLVLQAA  217 (293)
T ss_dssp             HHHHHHHHHHCCTSSSS--EEEEEEE-EETTG----TTSCHHHHHHHHHTTSSE-EECETT-EEEEE-HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhCCCCCcEEEEEEecceecC----CCcHHHHHHHHHHcCCcc-eeCCCCcEEEEecHHHHHHHHHHHH
Confidence            9999999998753    488999999999996    366777766666666555 4566788999999999999999999


Q ss_pred             hcCCCCCeEEec-CCCCCHHHHHHHHHHHhCCC
Q 019878          223 EKGRSGERYLLT-GENASFMQIFDMAAVITGTS  254 (334)
Q Consensus       223 ~~~~~g~~~~i~-g~~~s~~e~~~~i~~~~g~~  254 (334)
                      .....|++|... |+++++.|+++.+.+..|..
T Consensus       218 ~~~~~geifvl~mg~~v~I~dlA~~~i~~~g~~  250 (293)
T PF02719_consen  218 ALAKGGEIFVLDMGEPVKILDLAEAMIELSGLE  250 (293)
T ss_dssp             HH--TTEEEEE---TCEECCCHHHHHHHHTT-E
T ss_pred             hhCCCCcEEEecCCCCcCHHHHHHHHHhhcccc
Confidence            888889999996 89999999999999998753

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.97  E-value=4e-30  Score=230.41  Aligned_cols=229  Identities=25%  Similarity=0.339  Sum_probs=196.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCC----CCC---CCCeEEEEcCCCChhhHHHHhcC--CCEEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISG----LPS---EGALELVYGDVTDYRSLVDACFG--CHVIFH   71 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~----~~~---~~~v~~~~~Dl~d~~~~~~~~~~--~d~vih   71 (334)
                      +||||||+|-||+.+++++++.+ .++++++|++.+...    +..   ..++.++-||++|.+.+.+++++  +|+|+|
T Consensus       252 ~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~VfH  331 (588)
T COG1086         252 TVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDIVFH  331 (588)
T ss_pred             EEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCceEEE
Confidence            69999999999999999999976 688899998764321    111   24789999999999999999998  999999


Q ss_pred             eccc--cCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHH
Q 019878           72 TAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVA  149 (334)
Q Consensus        72 ~a~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~  149 (334)
                      +|+.  +..++.+|.+..++|+.||+|++++|.++ ++++||.+||..+..+                 .+.||.||+++
T Consensus       332 AAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~-~V~~~V~iSTDKAV~P-----------------tNvmGaTKr~a  393 (588)
T COG1086         332 AAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKN-GVKKFVLISTDKAVNP-----------------TNVMGATKRLA  393 (588)
T ss_pred             hhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHh-CCCEEEEEecCcccCC-----------------chHhhHHHHHH
Confidence            9998  55688999999999999999999999998 8999999999755432                 37799999999


Q ss_pred             HHHHHHHhh-c---CCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcC
Q 019878          150 DKIALQAAS-E---GLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG  225 (334)
Q Consensus       150 E~~~~~~~~-~---g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~  225 (334)
                      |++++.+.+ .   +..++.+|+|||.|..    ++.++-+..+..+|+ |....+++..|=|+.++|.++.++.+....
T Consensus       394 E~~~~a~~~~~~~~~T~f~~VRFGNVlGSr----GSViPlFk~QI~~Gg-plTvTdp~mtRyfMTI~EAv~LVlqA~a~~  468 (588)
T COG1086         394 EKLFQAANRNVSGTGTRFCVVRFGNVLGSR----GSVIPLFKKQIAEGG-PLTVTDPDMTRFFMTIPEAVQLVLQAGAIA  468 (588)
T ss_pred             HHHHHHHhhccCCCCcEEEEEEecceecCC----CCCHHHHHHHHHcCC-CccccCCCceeEEEEHHHHHHHHHHHHhhc
Confidence            999999865 2   4889999999999973    566655555555665 546678889999999999999999999988


Q ss_pred             CCCCeEEec-CCCCCHHHHHHHHHHHhCC
Q 019878          226 RSGERYLLT-GENASFMQIFDMAAVITGT  253 (334)
Q Consensus       226 ~~g~~~~i~-g~~~s~~e~~~~i~~~~g~  253 (334)
                      ..|++|.+. |+++++.|+++.+-+..|.
T Consensus       469 ~gGeifvldMGepvkI~dLAk~mi~l~g~  497 (588)
T COG1086         469 KGGEIFVLDMGEPVKIIDLAKAMIELAGQ  497 (588)
T ss_pred             CCCcEEEEcCCCCeEHHHHHHHHHHHhCC
Confidence            899999996 8999999999999999983

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.97  E-value=2e-29  Score=235.52  Aligned_cols=246  Identities=20%  Similarity=0.247  Sum_probs=183.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC---eEEEEEcCCCCCC-------CC-------------C------CCCCeEEEEc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH---SVRALVRRTSDIS-------GL-------------P------SEGALELVYG   51 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~-------~~-------------~------~~~~v~~~~~   51 (334)
                      ++|||||||||||++|++.|++.+.   +|+++.|..+...       .+             .      ...++..+.+
T Consensus       120 k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~G  199 (605)
T PLN02503        120 KNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVVG  199 (605)
T ss_pred             CEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEEe
Confidence            5799999999999999999998653   6899999654211       10             0      0236899999


Q ss_pred             CCCCh------hhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCc
Q 019878           52 DVTDY------RSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGY  125 (334)
Q Consensus        52 Dl~d~------~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~  125 (334)
                      |++++      +....+.+++|+|||+|+.+... .+++...++|+.++.+++++|++...+++|||+||.+|||...+.
T Consensus       200 Dl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~-~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~G~  278 (605)
T PLN02503        200 NVCESNLGLEPDLADEIAKEVDVIINSAANTTFD-ERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQGR  278 (605)
T ss_pred             eCCCcccCCCHHHHHHHHhcCCEEEECccccccc-cCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCCCe
Confidence            99987      34556667799999999986643 456778999999999999999987667899999999999976422


Q ss_pred             cCCCCCcc-----------------------------------c---------------------cccccChHHHHHHHH
Q 019878          126 IADENQVH-----------------------------------E---------------------EKYFCTQYERSKAVA  149 (334)
Q Consensus       126 ~~~e~~~~-----------------------------------~---------------------~~~~~~~Y~~sK~~~  149 (334)
                      . +|...+                                   .                     -....+.|..||+++
T Consensus       279 i-~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~lA  357 (605)
T PLN02503        279 I-MEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAMG  357 (605)
T ss_pred             e-eeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHHH
Confidence            1 111110                                   0                     011248899999999


Q ss_pred             HHHHHHHhhcCCCEEEEecCcee----------cCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHH
Q 019878          150 DKIALQAASEGLPIVPVYPGVIY----------GPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHI  219 (334)
Q Consensus       150 E~~~~~~~~~g~~~~ilR~~~v~----------G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  219 (334)
                      |+++++.. .++|++|+||+.|.          +++....+    ..+.....|....++++++...|+|+||.++.+++
T Consensus       358 E~lV~~~~-~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~----p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i  432 (605)
T PLN02503        358 EMVINSMR-GDIPVVIIRPSVIESTWKDPFPGWMEGNRMMD----PIVLYYGKGQLTGFLADPNGVLDVVPADMVVNATL  432 (605)
T ss_pred             HHHHHHhc-CCCCEEEEcCCEecccccCCccccccCccccc----hhhhheeccceeEEEeCCCeeEeEEeecHHHHHHH
Confidence            99999754 47999999999994          44322111    12222235666667789999999999999999999


Q ss_pred             HHhhc-----CCCCCeEEec-C--CCCCHHHHHHHHHHHhCC
Q 019878          220 AAMEK-----GRSGERYLLT-G--ENASFMQIFDMAAVITGT  253 (334)
Q Consensus       220 ~~~~~-----~~~g~~~~i~-g--~~~s~~e~~~~i~~~~g~  253 (334)
                      .++..     +..+.+||++ +  +++++.++.+.+.+....
T Consensus       433 ~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~  474 (605)
T PLN02503        433 AAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKS  474 (605)
T ss_pred             HHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence            88432     1247899995 5  678999999999976654

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.97  E-value=8.4e-29  Score=202.57  Aligned_cols=301  Identities=21%  Similarity=0.169  Sum_probs=220.7

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC----CCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCC
Q 019878            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI----SGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (334)
Q Consensus         3 ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~   78 (334)
                      +-|.|||||+|.+++.+|.+.|-+|++--|..+..    ..+.+.+.+-++..|++|+++++++.+...+|||+.|.  .
T Consensus        64 aTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLIGr--d  141 (391)
T KOG2865|consen   64 ATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLIGR--D  141 (391)
T ss_pred             EEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEeecc--c
Confidence            45789999999999999999999999999976532    22334467899999999999999999999999999994  3


Q ss_pred             CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHhh
Q 019878           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS  158 (334)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~  158 (334)
                      .+...-.+.++|+.+.++++..|++. ++.||||+|+...-            ...+    +-|-.+|.++|..++++..
T Consensus       142 ~eTknf~f~Dvn~~~aerlAricke~-GVerfIhvS~Lgan------------v~s~----Sr~LrsK~~gE~aVrdafP  204 (391)
T KOG2865|consen  142 YETKNFSFEDVNVHIAERLARICKEA-GVERFIHVSCLGAN------------VKSP----SRMLRSKAAGEEAVRDAFP  204 (391)
T ss_pred             cccCCcccccccchHHHHHHHHHHhh-Chhheeehhhcccc------------ccCh----HHHHHhhhhhHHHHHhhCC
Confidence            33445567899999999999999998 89999999987521            1111    5688999999999999765


Q ss_pred             cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCC-CCeEEecC-C
Q 019878          159 EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRS-GERYLLTG-E  236 (334)
Q Consensus       159 ~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~-g~~~~i~g-~  236 (334)
                      +   .||+||+.+||..+.. .+....+.++  -+-.+...+..++..+++||-|||.+|..+++.+++ |.+|...| .
T Consensus       205 e---AtIirPa~iyG~eDrf-ln~ya~~~rk--~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~Gktye~vGP~  278 (391)
T KOG2865|consen  205 E---ATIIRPADIYGTEDRF-LNYYASFWRK--FGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMGKTYEFVGPD  278 (391)
T ss_pred             c---ceeechhhhcccchhH-HHHHHHHHHh--cCceeeecCCcceeeccEEEehHHHHHHHhccCccccCceeeecCCc
Confidence            5   9999999999987542 2222222222  344443333346778999999999999999999874 99999987 4


Q ss_pred             CCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhcc-ceechHHHHHhcCCCCCCH
Q 019878          237 NASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQ-WAYSCVKAKTELGYNPRSL  315 (334)
Q Consensus       237 ~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~k~~~~lG~~p~~~  315 (334)
                      ...+.|+++.+.+.+.........|...+...+...++.-..+....+++++.+++..-. ..++.....++||.+++.+
T Consensus       279 ~yql~eLvd~my~~~~~~~ry~r~~mP~f~a~a~~~~f~~~pf~~~~pln~d~ie~~~v~~~vlt~~~tleDLgv~~t~l  358 (391)
T KOG2865|consen  279 RYQLSELVDIMYDMAREWPRYVRLPMPIFKAMAAARDFMIVPFPPPSPLNRDQIERLTVTDLVLTGAPTLEDLGVVLTKL  358 (391)
T ss_pred             hhhHHHHHHHHHHHHhhccccccCCcHHHHHHHhhhheeecCCCCCCCCCHHHhhheeehhhhcCCCCcHhhcCceeeec
Confidence            589999999999988875555555544444443333332111222233666666555332 2345555667899998877


Q ss_pred             HHHHHHHHHHHHh
Q 019878          316 KEGLQEVLPWLRS  328 (334)
Q Consensus       316 ~e~i~~~~~~~~~  328 (334)
                      |...-+.+..|+.
T Consensus       359 e~~~~e~l~~yR~  371 (391)
T KOG2865|consen  359 ELYPVEFLRQYRK  371 (391)
T ss_pred             ccccHHHHHHHhh
Confidence            7766666665544

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.97  E-value=1.3e-29  Score=216.75  Aligned_cols=212  Identities=30%  Similarity=0.442  Sum_probs=133.7

Q ss_pred             EEcCCChhhHHHHHHHHhCCC--eEEEEEcCCCCC---C----CCC-----------CCCCeEEEEcCCCCh------hh
Q 019878            5 VSGASGYLGGRLCHALLKQGH--SVRALVRRTSDI---S----GLP-----------SEGALELVYGDVTDY------RS   58 (334)
Q Consensus         5 ItG~tG~iG~~l~~~L~~~g~--~V~~~~r~~~~~---~----~~~-----------~~~~v~~~~~Dl~d~------~~   58 (334)
                      |||||||||++|++.|++++.  +|+++.|..+..   +    .+.           ...+++++.||++++      +.
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999876  899999986421   0    000           134899999999975      45


Q ss_pred             HHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCcc------CCCCCc
Q 019878           59 LVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYI------ADENQV  132 (334)
Q Consensus        59 ~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~------~~e~~~  132 (334)
                      +..+.+++|+|||+||.++.. .+...+++.|+.|++++++.|.+. ..++|+|+||..+.+......      .++...
T Consensus        81 ~~~L~~~v~~IiH~Aa~v~~~-~~~~~~~~~NV~gt~~ll~la~~~-~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~  158 (249)
T PF07993_consen   81 YQELAEEVDVIIHCAASVNFN-APYSELRAVNVDGTRNLLRLAAQG-KRKRFHYISTAYVAGSRPGTIEEKVYPEEEDDL  158 (249)
T ss_dssp             HHHHHHH--EEEE--SS-SBS--S--EEHHHHHHHHHHHHHHHTSS-S---EEEEEEGGGTTS-TTT--SSS-HHH--EE
T ss_pred             hhccccccceeeecchhhhhc-ccchhhhhhHHHHHHHHHHHHHhc-cCcceEEeccccccCCCCCcccccccccccccc
Confidence            667778899999999987764 356678999999999999999976 456999999966666554322      223333


Q ss_pred             cccccccChHHHHHHHHHHHHHHHhhc-CCCEEEEecCceecCCCC---CchhHHHHHHH-HHHcCCCCccccCCCCcee
Q 019878          133 HEEKYFCTQYERSKAVADKIALQAASE-GLPIVPVYPGVIYGPGKL---TTGNLVAKLMI-ERFNGRLPGYIGYGNDRFS  207 (334)
Q Consensus       133 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~-g~~~~ilR~~~v~G~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  207 (334)
                      .......+.|..||+++|++++++.+. |++++|+||+.|+|....   ....++..++. ....+..+...+..+...+
T Consensus       159 ~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d  238 (249)
T PF07993_consen  159 DPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARLD  238 (249)
T ss_dssp             E--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT--
T ss_pred             hhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCceEe
Confidence            333445679999999999999999865 999999999999994322   12232333333 3345666667777777899


Q ss_pred             eeeHHHHHHHH
Q 019878          208 FCHVDDVVDGH  218 (334)
Q Consensus       208 ~i~v~D~a~a~  218 (334)
                      +++||.+|++|
T Consensus       239 ~vPVD~va~aI  249 (249)
T PF07993_consen  239 LVPVDYVARAI  249 (249)
T ss_dssp             EEEHHHHHHHH
T ss_pred             EECHHHHHhhC
Confidence            99999999986

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK12320 hypothetical protein; Provisional

Probab=99.96  E-value=6.4e-28  Score=227.84  Aligned_cols=200  Identities=19%  Similarity=0.283  Sum_probs=152.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~   80 (334)
                      ||||||||+||||++|++.|+++|++|++++|.+....    .++++++.+|+.|.. +.+++.++|+|||+|+....  
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~~----~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa~~~~--   73 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDAL----DPRVDYVCASLRNPV-LQELAGEADAVIHLAPVDTS--   73 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhcc----cCCceEEEccCCCHH-HHHHhcCCCEEEEcCccCcc--
Confidence            89999999999999999999999999999998764321    136899999999985 77888899999999986321  


Q ss_pred             CCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHhhcC
Q 019878           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEG  160 (334)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g  160 (334)
                          ....+|+.++.+++++|++. ++ ++||+||.  +|...                 .|.    .+|.++..   ++
T Consensus        74 ----~~~~vNv~Gt~nLleAA~~~-Gv-RiV~~SS~--~G~~~-----------------~~~----~aE~ll~~---~~  121 (699)
T PRK12320         74 ----APGGVGITGLAHVANAAARA-GA-RLLFVSQA--AGRPE-----------------LYR----QAETLVST---GW  121 (699)
T ss_pred             ----chhhHHHHHHHHHHHHHHHc-CC-eEEEEECC--CCCCc-----------------ccc----HHHHHHHh---cC
Confidence                12358999999999999998 55 79999986  33211                 122    36666554   56


Q ss_pred             CCEEEEecCceecCCCCCc-hhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCCCCeEEec-CCCC
Q 019878          161 LPIVPVYPGVIYGPGKLTT-GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLT-GENA  238 (334)
Q Consensus       161 ~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g~~~~i~-g~~~  238 (334)
                      ++++++|++++||++.... .+++..++.....+          +...++|++|++++++.+++.... ++||++ ++.+
T Consensus       122 ~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~----------~pI~vIyVdDvv~alv~al~~~~~-GiyNIG~~~~~  190 (699)
T PRK12320        122 APSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSA----------RPIRVLHLDDLVRFLVLALNTDRN-GVVDLATPDTT  190 (699)
T ss_pred             CCEEEEeCceecCCCCcccHhHHHHHHHHHHHcC----------CceEEEEHHHHHHHHHHHHhCCCC-CEEEEeCCCee
Confidence            8999999999999964321 23444444333322          233469999999999999986544 499996 5779


Q ss_pred             CHHHHHHHHHHH
Q 019878          239 SFMQIFDMAAVI  250 (334)
Q Consensus       239 s~~e~~~~i~~~  250 (334)
                      |+.|+++.+...
T Consensus       191 Si~el~~~i~~~  202 (699)
T PRK12320        191 NVVTAWRLLRSV  202 (699)
T ss_pred             EHHHHHHHHHHh
Confidence            999999988765

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.96  E-value=3.1e-28  Score=236.09  Aligned_cols=266  Identities=17%  Similarity=0.126  Sum_probs=186.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc--CCCEEEEeccccC-
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVE-   77 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vih~a~~~~-   77 (334)
                      ||||||||+||||++|++.|.++|++|..                   ..+|++|.+.+...+.  ++|+|||||+... 
T Consensus       381 mkiLVtGa~G~iG~~l~~~L~~~g~~v~~-------------------~~~~l~d~~~v~~~i~~~~pd~Vih~Aa~~~~  441 (668)
T PLN02260        381 LKFLIYGRTGWIGGLLGKLCEKQGIAYEY-------------------GKGRLEDRSSLLADIRNVKPTHVFNAAGVTGR  441 (668)
T ss_pred             ceEEEECCCchHHHHHHHHHHhCCCeEEe-------------------eccccccHHHHHHHHHhhCCCEEEECCcccCC
Confidence            89999999999999999999999988731                   1146788888888776  5999999999753 


Q ss_pred             ----CCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccC------CCccCCCCCccccccccChHHHHHH
Q 019878           78 ----PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST------DGYIADENQVHEEKYFCTQYERSKA  147 (334)
Q Consensus        78 ----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~------~~~~~~e~~~~~~~~~~~~Y~~sK~  147 (334)
                          .++.++...+++|+.++.+|+++|++. ++ ++|++||.+||+..      ...+..|++.+.+  +.+.|+.||+
T Consensus       442 ~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~-g~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~--~~~~Yg~sK~  517 (668)
T PLN02260        442 PNVDWCESHKVETIRANVVGTLTLADVCREN-GL-LMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNF--TGSFYSKTKA  517 (668)
T ss_pred             CCCChHHhCHHHHHHHHhHHHHHHHHHHHHc-CC-eEEEEcccceecCCcccccccCCCCCcCCCCCC--CCChhhHHHH
Confidence                234577889999999999999999998 56 57788898998642      1224445443222  2488999999


Q ss_pred             HHHHHHHHHhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCC
Q 019878          148 VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRS  227 (334)
Q Consensus       148 ~~E~~~~~~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~  227 (334)
                      ++|++++.+.    ++.++|+.++||.+.....+++..++.    .......+     .+..+++|++.++..+++. ..
T Consensus       518 ~~E~~~~~~~----~~~~~r~~~~~~~~~~~~~nfv~~~~~----~~~~~~vp-----~~~~~~~~~~~~~~~l~~~-~~  583 (668)
T PLN02260        518 MVEELLREYD----NVCTLRVRMPISSDLSNPRNFITKISR----YNKVVNIP-----NSMTVLDELLPISIEMAKR-NL  583 (668)
T ss_pred             HHHHHHHhhh----hheEEEEEEecccCCCCccHHHHHHhc----cceeeccC-----CCceehhhHHHHHHHHHHh-CC
Confidence            9999998863    477889888997543222344444332    22221111     2467789999998888874 34


Q ss_pred             CCeEEecC-CCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHH
Q 019878          228 GERYLLTG-ENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKT  306 (334)
Q Consensus       228 g~~~~i~g-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~  306 (334)
                      +++||+++ +.+|+.|+++.+.+.++......+++..-..          .          ......... .+|++|+++
T Consensus       584 ~giyni~~~~~~s~~e~a~~i~~~~~~~~~~~~~~~~~~~----------~----------~~~a~rp~~-~l~~~k~~~  642 (668)
T PLN02260        584 RGIWNFTNPGVVSHNEILEMYKDYIDPGFKWSNFTLEEQA----------K----------VIVAPRSNN-EMDASKLKK  642 (668)
T ss_pred             CceEEecCCCcCcHHHHHHHHHHhcCCcccccccCHHHhh----------h----------HhhCCCccc-cccHHHHHH
Confidence            68999974 6699999999999987522111111110000          0          000011222 589999998


Q ss_pred             hcCCCCCCHHHHHHHHHHH
Q 019878          307 ELGYNPRSLKEGLQEVLPW  325 (334)
Q Consensus       307 ~lG~~p~~~~e~i~~~~~~  325 (334)
                      .+|. +.++++++++++..
T Consensus       643 ~~~~-~~~~~~~l~~~~~~  660 (668)
T PLN02260        643 EFPE-LLSIKESLIKYVFE  660 (668)
T ss_pred             hCcc-ccchHHHHHHHHhh
Confidence            8999 77999999999864

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.96  E-value=4.6e-28  Score=211.74  Aligned_cols=266  Identities=13%  Similarity=0.119  Sum_probs=185.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHh------cC-CCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC------FG-CHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~------~~-~d~vih~a~   74 (334)
                      +||||||||++|++++++|+++|++|++++|++++...    .+++.+.+|+.|++.+.+++      .+ +|.|+|+++
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~----~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~   76 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG----PNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAP   76 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC----CCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCC
Confidence            58999999999999999999999999999999875432    36788899999999999998      56 999999986


Q ss_pred             ccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHH
Q 019878           75 LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIAL  154 (334)
Q Consensus        75 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~  154 (334)
                      ...    +       ......+++++|++. +++|||++||..++....                     .+...|+.++
T Consensus        77 ~~~----~-------~~~~~~~~i~aa~~~-gv~~~V~~Ss~~~~~~~~---------------------~~~~~~~~l~  123 (285)
T TIGR03649        77 PIP----D-------LAPPMIKFIDFARSK-GVRRFVLLSASIIEKGGP---------------------AMGQVHAHLD  123 (285)
T ss_pred             CCC----C-------hhHHHHHHHHHHHHc-CCCEEEEeeccccCCCCc---------------------hHHHHHHHHH
Confidence            321    1       124557899999998 799999999865432100                     1222344443


Q ss_pred             HHhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC-CCCeEEe
Q 019878          155 QAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR-SGERYLL  233 (334)
Q Consensus       155 ~~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-~g~~~~i  233 (334)
                      .  ..|++++++||+++|+....       .+....+......+.+.++..++|+|++|+|+++..++..+. .++.|++
T Consensus       124 ~--~~gi~~tilRp~~f~~~~~~-------~~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l  194 (285)
T TIGR03649       124 S--LGGVEYTVLRPTWFMENFSE-------EFHVEAIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKVAPNTDYVV  194 (285)
T ss_pred             h--ccCCCEEEEeccHHhhhhcc-------cccccccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCCcCCCeEEe
Confidence            3  14899999999999864210       111111222222334567888999999999999999998764 4778999


Q ss_pred             cC-CCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHH--------hhccceechHHH
Q 019878          234 TG-ENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHV--------LAHQWAYSCVKA  304 (334)
Q Consensus       234 ~g-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~d~~k~  304 (334)
                      +| +.+|+.|+++.+.+.+|++.+...+|.......-.      . .+    +++.....        ..+.....++.+
T Consensus       195 ~g~~~~s~~eia~~l~~~~g~~v~~~~~~~~~~~~~l~------~-~g----~~~~~~~~~~~~~~~~~~g~~~~~~~~~  263 (285)
T TIGR03649       195 LGPELLTYDDVAEILSRVLGRKITHVKLTEEELAQRLQ------S-FG----MPEDLARMLASLDTAVKNGAEVRLNDVV  263 (285)
T ss_pred             eCCccCCHHHHHHHHHHHhCCceEEEeCCHHHHHHHHH------H-cC----CCHHHHHHHHHHHHHHhCCccccccchH
Confidence            75 78999999999999999998887777654322100      0 00    11110000        011111135566


Q ss_pred             HHhcCCCCCCHHHHHHHHHH
Q 019878          305 KTELGYNPRSLKEGLQEVLP  324 (334)
Q Consensus       305 ~~~lG~~p~~~~e~i~~~~~  324 (334)
                      ++.+|.+|+++++.+++..+
T Consensus       264 ~~~~G~~p~~~~~~~~~~~~  283 (285)
T TIGR03649       264 KAVTGSKPRGFRDFAESNKA  283 (285)
T ss_pred             HHHhCcCCccHHHHHHHhhh
Confidence            67799999999999988754

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.96  E-value=1.7e-27  Score=248.87  Aligned_cols=321  Identities=23%  Similarity=0.248  Sum_probs=218.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC----CeEEEEEcCCCCCCCC---------------CCCCCeEEEEcCCCC------
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG----HSVRALVRRTSDISGL---------------PSEGALELVYGDVTD------   55 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~---------------~~~~~v~~~~~Dl~d------   55 (334)
                      |+|||||||||||+++++.|++++    ++|+++.|........               ....+++++.+|+.+      
T Consensus       972 ~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl~ 1051 (1389)
T TIGR03443       972 ITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGLS 1051 (1389)
T ss_pred             ceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCcC
Confidence            579999999999999999999876    8899999975432110               001268999999974      


Q ss_pred             hhhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCC-----------
Q 019878           56 YRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG-----------  124 (334)
Q Consensus        56 ~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~-----------  124 (334)
                      .+.+.++..++|+|||+|+.++.. .....+...|+.|+.+++++|.+. ++++|+|+||.++|+....           
T Consensus      1052 ~~~~~~l~~~~d~iiH~Aa~~~~~-~~~~~~~~~nv~gt~~ll~~a~~~-~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~ 1129 (1389)
T TIGR03443      1052 DEKWSDLTNEVDVIIHNGALVHWV-YPYSKLRDANVIGTINVLNLCAEG-KAKQFSFVSSTSALDTEYYVNLSDELVQAG 1129 (1389)
T ss_pred             HHHHHHHHhcCCEEEECCcEecCc-cCHHHHHHhHHHHHHHHHHHHHhC-CCceEEEEeCeeecCcccccchhhhhhhcc
Confidence            455677777899999999986532 233445568999999999999987 6889999999999974211           


Q ss_pred             -ccCCCCCcc--ccccccChHHHHHHHHHHHHHHHhhcCCCEEEEecCceecCCCCCc---hhHHHHHHHHHHcCCCCcc
Q 019878          125 -YIADENQVH--EEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTT---GNLVAKLMIERFNGRLPGY  198 (334)
Q Consensus       125 -~~~~e~~~~--~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~ilR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~  198 (334)
                       ....|+...  .+..+.+.|+.||+++|.++..+.+.|++++++||+.|||++..+.   ..++..++.....-   ..
T Consensus      1130 ~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~---~~ 1206 (1389)
T TIGR03443      1130 GAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQL---GL 1206 (1389)
T ss_pred             CCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHh---CC
Confidence             111222211  1112346799999999999998877799999999999999865432   23344444333221   12


Q ss_pred             ccCCCCceeeeeHHHHHHHHHHHhhcCC---CCCeEEecC-CCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHH
Q 019878          199 IGYGNDRFSFCHVDDVVDGHIAAMEKGR---SGERYLLTG-ENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVF  274 (334)
Q Consensus       199 ~~~~~~~~~~i~v~D~a~a~~~~~~~~~---~g~~~~i~g-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~  274 (334)
                      +....+.++|++++|+++++..++.++.   .+.+||+++ ..+++.++++.+.+. |.+.+....+.|...+.....+.
T Consensus      1207 ~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~~~w~~~l~~~~~~~ 1285 (1389)
T TIGR03443      1207 IPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY-GYDVEIVDYVHWRKSLERFVIER 1285 (1389)
T ss_pred             cCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh-CCCCCccCHHHHHHHHHHhcccc
Confidence            2344567899999999999999987653   346899974 678999999999764 77777777777766443211000


Q ss_pred             HHHHhCCCCCCCHHHHHH-------hhccceechHHHHHhcC-------CCCC----CHHHHHHHHHHHHHhcCCCC
Q 019878          275 FSRITGKLPLISYPTVHV-------LAHQWAYSCVKAKTELG-------YNPR----SLKEGLQEVLPWLRSSGMIK  333 (334)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~-------~~~~~~~d~~k~~~~lG-------~~p~----~~~e~i~~~~~~~~~~~~~~  333 (334)
                          ....+ .. +..++       ......+|+++.++.|.       ....    --++.|++++++|.+.++++
T Consensus      1286 ----~~~~~-~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1356 (1389)
T TIGR03443      1286 ----SEDNA-LF-PLLHFVLDDLPQSTKAPELDDTNAATSLKADAAWTGVDVSSGAGVTEEQIGIYIAYLVKVGFLP 1356 (1389)
T ss_pred             ----Cccch-hh-hHHHHhhccCcccccCCCCCCHHHHHHHHhhcccccCCCcCCCCCCHHHHHHHHHHHHHCCCCC
Confidence                00000 00 00011       12244568888887662       2221    23577889999998877664

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.94  E-value=4.7e-27  Score=201.79  Aligned_cols=244  Identities=25%  Similarity=0.299  Sum_probs=171.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCC-------C--------CCCCCeEEEEcCCCC------hhh
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISG-------L--------PSEGALELVYGDVTD------YRS   58 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~-------~--------~~~~~v~~~~~Dl~d------~~~   58 (334)
                      ++||+||||||+|.+|++.|+.+- .+|+++.|..+....       +        ...++++.+.||+..      ...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            589999999999999999999864 599999997662110       0        111589999999984      456


Q ss_pred             HHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccC--CCC----Cc
Q 019878           59 LVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIA--DEN----QV  132 (334)
Q Consensus        59 ~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~--~e~----~~  132 (334)
                      +.++.+.+|.|||+|+.++ +...+..+...|+.|+..+++.|... ..|.|+|+||++|+........  +++    +.
T Consensus        81 ~~~La~~vD~I~H~gA~Vn-~v~pYs~L~~~NVlGT~evlrLa~~g-k~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~  158 (382)
T COG3320          81 WQELAENVDLIIHNAALVN-HVFPYSELRGANVLGTAEVLRLAATG-KPKPLHYVSSISVGETEYYSNFTVDFDEISPTR  158 (382)
T ss_pred             HHHHhhhcceEEecchhhc-ccCcHHHhcCcchHhHHHHHHHHhcC-CCceeEEEeeeeeccccccCCCccccccccccc
Confidence            7888888999999999865 23567788999999999999999986 6888999999999875442211  111    11


Q ss_pred             cccccccChHHHHHHHHHHHHHHHhhcCCCEEEEecCceecCCCCC---chhHHHHHHHHHHcCCCCccccCCCCceeee
Q 019878          133 HEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLT---TGNLVAKLMIERFNGRLPGYIGYGNDRFSFC  209 (334)
Q Consensus       133 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~ilR~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  209 (334)
                      .....+.++|++||+++|.+++++...|++++|+|||.|-|+...+   ...++.+++.-.++-+..   .......+.+
T Consensus       159 ~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~---P~~~~~~~~~  235 (382)
T COG3320         159 NVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIA---PDSEYSLDML  235 (382)
T ss_pred             cccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCC---CCcccchhhC
Confidence            1223346899999999999999999889999999999999986522   223555555554432221   1222333444


Q ss_pred             eHHHHHHHH-----------HHHhhcCC-CCCeEEe-c-CCCCCHHHHHHHHHH
Q 019878          210 HVDDVVDGH-----------IAAMEKGR-SGERYLL-T-GENASFMQIFDMAAV  249 (334)
Q Consensus       210 ~v~D~a~a~-----------~~~~~~~~-~g~~~~i-~-g~~~s~~e~~~~i~~  249 (334)
                      .++++++++           ..+..++. .-..|++ . |..+...++.++..+
T Consensus       236 p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~  289 (382)
T COG3320         236 PVDHVARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS  289 (382)
T ss_pred             ccceeeEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence            444444433           33332222 2234443 3 778999999999887

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.94  E-value=1e-25  Score=180.85  Aligned_cols=310  Identities=18%  Similarity=0.191  Sum_probs=216.3

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC-----CC-C-----CCCeEEEEcCCCChhhHHHHhc--CCCEE
Q 019878            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-----LP-S-----EGALELVYGDVTDYRSLVDACF--GCHVI   69 (334)
Q Consensus         3 ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~-~-----~~~v~~~~~Dl~d~~~~~~~~~--~~d~v   69 (334)
                      .||||.||+=|++|++.|+.+||+|+++.|+.+....     +- .     ....+...+|++|...+.+++.  +++-|
T Consensus        31 ALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikPtEi  110 (376)
T KOG1372|consen   31 ALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKPTEV  110 (376)
T ss_pred             EEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCchhh
Confidence            6999999999999999999999999999997764321     10 0     1368889999999999999987  48999


Q ss_pred             EEeccccC--CCCCCcccchhhhhHHHHHHHHHHHhcCCC--cEEEEecccceeccCCCccCCCCCccccccccChHHHH
Q 019878           70 FHTAALVE--PWLPDPSRFFAVNVEGLKNVVQAAKETKTV--EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (334)
Q Consensus        70 ih~a~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (334)
                      +|+|+..+  -+..-++..-++...|+.+|+++.+.++-.  .||-+.||...||.....|..|.++.-|   .++|+.+
T Consensus       111 YnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyP---RSPYa~a  187 (376)
T KOG1372|consen  111 YNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYP---RSPYAAA  187 (376)
T ss_pred             hhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCC---CChhHHh
Confidence            99999733  234456667788999999999999987422  3899999999999888888888776555   6999999


Q ss_pred             HHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCchhHHHHHHHHHH-----cCCCCccccCCCCceeeeeHHHHHHHHH
Q 019878          146 KAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERF-----NGRLPGYIGYGNDRFSFCHVDDVVDGHI  219 (334)
Q Consensus       146 K~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~v~D~a~a~~  219 (334)
                      |..+--++..+.+ +++=.|.--..+--.|..  ..+++.+-+.+..     ........|+-+..|||-|..|.++|+.
T Consensus       188 Kmy~~WivvNyREAYnmfAcNGILFNHESPRR--GenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVEAMW  265 (376)
T KOG1372|consen  188 KMYGYWIVVNYREAYNMFACNGILFNHESPRR--GENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVEAMW  265 (376)
T ss_pred             hhhheEEEEEhHHhhcceeeccEeecCCCCcc--ccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHHHHHH
Confidence            9987766665553 555444433333334432  2344444333322     2223344577789999999999999999


Q ss_pred             HHhhcCCCCCeEEecCCCCCHHHHHHHHHHHhCCCCCcccccHHHHH--HHHHHHHHHHHHhCCCCCCCHHHHHHhhccc
Q 019878          220 AAMEKGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIE--AYGWILVFFSRITGKLPLISYPTVHVLAHQW  297 (334)
Q Consensus       220 ~~~~~~~~g~~~~i~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (334)
                      +++++..+......+|+..|++|+++......|....+.....-...  .-+.+     +..-......|...+.+.   
T Consensus       266 ~mLQ~d~PdDfViATge~hsVrEF~~~aF~~ig~~l~Weg~gv~~~~~n~~g~v-----~V~v~~kYyRPtEVd~Lq---  337 (376)
T KOG1372|consen  266 LMLQQDSPDDFVIATGEQHSVREFCNLAFAEIGEVLNWEGEGVDEVGKNDDGVV-----RVKVDPKYYRPTEVDTLQ---  337 (376)
T ss_pred             HHHhcCCCCceEEecCCcccHHHHHHHHHHhhCcEEeecccccccccccCCceE-----EEEecccccCcchhhhhc---
Confidence            99998776655455799999999999988877753322100000000  00000     000001122333334433   


Q ss_pred             eechHHHHHhcCCCCC-CHHHHHHHHHHHH
Q 019878          298 AYSCVKAKTELGYNPR-SLKEGLQEVLPWL  326 (334)
Q Consensus       298 ~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~  326 (334)
                       -|.+|+++.|||+|+ .++|-+++|+..-
T Consensus       338 -GdasKAk~~LgW~pkv~f~eLVkeMv~~D  366 (376)
T KOG1372|consen  338 -GDASKAKKTLGWKPKVTFPELVKEMVASD  366 (376)
T ss_pred             -CChHHHHHhhCCCCccCHHHHHHHHHHhH
Confidence             488999999999999 9999999998743

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.94  E-value=7e-26  Score=184.94  Aligned_cols=183  Identities=32%  Similarity=0.484  Sum_probs=147.1

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCCCCC
Q 019878            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLPD   82 (334)
Q Consensus         3 ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~~~   82 (334)
                      |+|+||||++|+.+++.|+++|++|+++.|++.+...   ..+++++.+|+.|.+.+.+++.++|+|||+++....    
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~----   73 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPK----   73 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTT----
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcc----
Confidence            7999999999999999999999999999999886554   348999999999999999999999999999974321    


Q ss_pred             cccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHhhcCCC
Q 019878           83 PSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLP  162 (334)
Q Consensus        83 ~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~  162 (334)
                             ....++++++++++. +++|+|++||.++|+.............     ...|...|..+|+.++.   .+++
T Consensus        74 -------~~~~~~~~~~a~~~~-~~~~~v~~s~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~e~~~~~---~~~~  137 (183)
T PF13460_consen   74 -------DVDAAKNIIEAAKKA-GVKRVVYLSSAGVYRDPPGLFSDEDKPI-----FPEYARDKREAEEALRE---SGLN  137 (183)
T ss_dssp             -------HHHHHHHHHHHHHHT-TSSEEEEEEETTGTTTCTSEEEGGTCGG-----GHHHHHHHHHHHHHHHH---STSE
T ss_pred             -------ccccccccccccccc-ccccceeeeccccCCCCCcccccccccc-----hhhhHHHHHHHHHHHHh---cCCC
Confidence                   288889999999998 7999999999999986554322111111     14588999999988865   6999


Q ss_pred             EEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhc
Q 019878          163 IVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEK  224 (334)
Q Consensus       163 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~  224 (334)
                      ++++||+.+||+.... ..+               ....+....++|+++|+|++++.++++
T Consensus       138 ~~ivrp~~~~~~~~~~-~~~---------------~~~~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  138 WTIVRPGWIYGNPSRS-YRL---------------IKEGGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             EEEEEESEEEBTTSSS-EEE---------------ESSTSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             EEEEECcEeEeCCCcc-eeE---------------EeccCCCCcCcCCHHHHHHHHHHHhCC
Confidence            9999999999986321 111               111345566999999999999998864

...

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.94  E-value=5.1e-25  Score=188.82  Aligned_cols=225  Identities=22%  Similarity=0.254  Sum_probs=160.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC-CCCCCeEEEEcCCCC-hhhHHHHh-cCCCEEEEeccccC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-PSEGALELVYGDVTD-YRSLVDAC-FGCHVIFHTAALVE   77 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~v~~~~~Dl~d-~~~~~~~~-~~~d~vih~a~~~~   77 (334)
                      |+||||||||+||+++++.|+++|++|+++.|+.++.... ....+++++.+|++| .+.+.+.+ .++|+|||+++...
T Consensus        18 ~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g~~~   97 (251)
T PLN00141         18 KTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATGFRR   97 (251)
T ss_pred             CeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCCCCc
Confidence            6799999999999999999999999999999987643221 112368999999998 46677777 68999999988632


Q ss_pred             CCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHh
Q 019878           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA  157 (334)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~  157 (334)
                      .  .++...+++|..++.++++++++. +++++|++||..+|+.....+..+..  ....+...|..+|..+|++++.  
T Consensus        98 ~--~~~~~~~~~n~~~~~~ll~a~~~~-~~~~iV~iSS~~v~g~~~~~~~~~~~--~~~~~~~~~~~~k~~~e~~l~~--  170 (251)
T PLN00141         98 S--FDPFAPWKVDNFGTVNLVEACRKA-GVTRFILVSSILVNGAAMGQILNPAY--IFLNLFGLTLVAKLQAEKYIRK--  170 (251)
T ss_pred             C--CCCCCceeeehHHHHHHHHHHHHc-CCCEEEEEccccccCCCcccccCcch--hHHHHHHHHHHHHHHHHHHHHh--
Confidence            2  123344678999999999999987 68999999999999854322211110  0000112244568888887665  


Q ss_pred             hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC-CCCeEEecC-
Q 019878          158 SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR-SGERYLLTG-  235 (334)
Q Consensus       158 ~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-~g~~~~i~g-  235 (334)
                       .|++++++||+++++....  +             ... .........++++.+|+|+++..++..+. .+.++.+.+ 
T Consensus       171 -~gi~~~iirpg~~~~~~~~--~-------------~~~-~~~~~~~~~~~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~  233 (251)
T PLN00141        171 -SGINYTIVRPGGLTNDPPT--G-------------NIV-MEPEDTLYEGSISRDQVAEVAVEALLCPESSYKVVEIVAR  233 (251)
T ss_pred             -cCCcEEEEECCCccCCCCC--c-------------eEE-ECCCCccccCcccHHHHHHHHHHHhcChhhcCcEEEEecC
Confidence             6899999999999986421  1             000 11111122358999999999999998766 467777753 


Q ss_pred             -C--CCCHHHHHHHHHH
Q 019878          236 -E--NASFMQIFDMAAV  249 (334)
Q Consensus       236 -~--~~s~~e~~~~i~~  249 (334)
                       .  ..++.+++..+++
T Consensus       234 ~~~~~~~~~~~~~~~~~  250 (251)
T PLN00141        234 ADAPKRSYKDLFASIKQ  250 (251)
T ss_pred             CCCCchhHHHHHHHhhc
Confidence             2  3688888887764

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.93  E-value=1.8e-24  Score=172.67  Aligned_cols=297  Identities=18%  Similarity=0.158  Sum_probs=219.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhC-CCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc--CCCEEEEeccccCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVEP   78 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vih~a~~~~~   78 (334)
                      ||||||+-|++|..++..|..+ |.+-++++.-.++...+..  .-.++..|+.|...+.++.-  .+|++||+.+..+.
T Consensus        46 rvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~~--~GPyIy~DILD~K~L~eIVVn~RIdWL~HfSALLSA  123 (366)
T KOG2774|consen   46 RVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVTD--VGPYIYLDILDQKSLEEIVVNKRIDWLVHFSALLSA  123 (366)
T ss_pred             eEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhcc--cCCchhhhhhccccHHHhhcccccceeeeHHHHHHH
Confidence            6999999999999999999865 6544444332222223332  46789999999999999874  39999999987443


Q ss_pred             -CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHh
Q 019878           79 -WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA  157 (334)
Q Consensus        79 -~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~  157 (334)
                       .+.+.....++|+.|..|+++.|++++ . ++...||++.||++.  +.+.++......|.+.||.||..+|.+-..+.
T Consensus       124 vGE~NVpLA~~VNI~GvHNil~vAa~~k-L-~iFVPSTIGAFGPtS--PRNPTPdltIQRPRTIYGVSKVHAEL~GEy~~  199 (366)
T KOG2774|consen  124 VGETNVPLALQVNIRGVHNILQVAAKHK-L-KVFVPSTIGAFGPTS--PRNPTPDLTIQRPRTIYGVSKVHAELLGEYFN  199 (366)
T ss_pred             hcccCCceeeeecchhhhHHHHHHHHcC-e-eEeecccccccCCCC--CCCCCCCeeeecCceeechhHHHHHHHHHHHH
Confidence             556777889999999999999999983 3 777789999999776  33333334445567999999999999888865


Q ss_pred             -hcCCCEEEEecCceecCCCCC--chhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC---CCCeE
Q 019878          158 -SEGLPIVPVYPGVIYGPGKLT--TGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR---SGERY  231 (334)
Q Consensus       158 -~~g~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~---~g~~~  231 (334)
                       +.|+.+.++|++.+......+  ........+..+++++.-..+-.++.+..++|.+|..++++..+..+.   ..++|
T Consensus       200 hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~~lkrr~y  279 (366)
T KOG2774|consen  200 HRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLAADSQSLKRRTY  279 (366)
T ss_pred             hhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHHhCCHHHhhhhee
Confidence             569999999999888753221  223455566677766666667778899999999999999999888754   47899


Q ss_pred             EecCCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhcCCC
Q 019878          232 LLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYN  311 (334)
Q Consensus       232 ~i~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~  311 (334)
                      |+++-++|-.|+++.+.+.+.    ...+.+..-                    +. +.-.-.....+|.+.+|+++.|+
T Consensus       280 nvt~~sftpee~~~~~~~~~p----~~~i~y~~~--------------------sr-q~iad~wp~~~dds~ar~~wh~~  334 (366)
T KOG2774|consen  280 NVTGFSFTPEEIADAIRRVMP----GFEIDYDIC--------------------TR-QSIADSWPMSLDDSEARTEWHEK  334 (366)
T ss_pred             eeceeccCHHHHHHHHHhhCC----Cceeecccc--------------------hh-hhhhhhcccccCchhHhhHHHHh
Confidence            999999999999998887652    222221000                    00 00011233357999999999999


Q ss_pred             CC-CHHHHHHHHHHHHHhc
Q 019878          312 PR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       312 p~-~~~e~i~~~~~~~~~~  329 (334)
                      -+ ++...+.-+++....+
T Consensus       335 h~~~l~~~i~~~i~~~~~n  353 (366)
T KOG2774|consen  335 HSLHLLSIISTVVAVHKSN  353 (366)
T ss_pred             hhhhHHHHHHHHHHHHHhh
Confidence            98 8888887777765543

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.93  E-value=6e-25  Score=191.22  Aligned_cols=226  Identities=20%  Similarity=0.151  Sum_probs=163.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      ++|||||+|+||++++++|+++|++|+++.|+++....+..  ..++.++.+|++|.+++.++++       ++|+|||+
T Consensus         4 ~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~   83 (276)
T PRK06482          4 TWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVSN   83 (276)
T ss_pred             EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            69999999999999999999999999999998654322211  1268899999999998877654       48999999


Q ss_pred             ccccCCC------CCCcccchhhhhHHHHHHHHHH----HhcCCCcEEEEecccceeccCCCccCCCCCccccccccChH
Q 019878           73 AALVEPW------LPDPSRFFAVNVEGLKNVVQAA----KETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (334)
Q Consensus        73 a~~~~~~------~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y  142 (334)
                      ||.....      .++....+++|+.++.++++++    ++. +.+++|++||.......+              +.+.|
T Consensus        84 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~--------------~~~~Y  148 (276)
T PRK06482         84 AGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQ-GGGRIVQVSSEGGQIAYP--------------GFSLY  148 (276)
T ss_pred             CCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEEcCcccccCCC--------------CCchh
Confidence            9974321      1223567789999999999998    333 567999999965432211              13779


Q ss_pred             HHHHHHHHHHHHHHhh----cCCCEEEEecCce---ecCCCCCc------hhHHHHHHHHHHcCCCCccccCCCCceeee
Q 019878          143 ERSKAVADKIALQAAS----EGLPIVPVYPGVI---YGPGKLTT------GNLVAKLMIERFNGRLPGYIGYGNDRFSFC  209 (334)
Q Consensus       143 ~~sK~~~E~~~~~~~~----~g~~~~ilR~~~v---~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  209 (334)
                      +.+|++.|.+.+.+.+    +|++++++||+.+   ||++....      .......+.+.+..+...+         +.
T Consensus       149 ~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~  219 (276)
T PRK06482        149 HATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAI---------PG  219 (276)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCC---------CC
Confidence            9999999988887653    5999999999988   66542210      0111122333333322211         35


Q ss_pred             eHHHHHHHHHHHhhcCCCCCeEEec-CCCCCHHHHHHHHHHHh
Q 019878          210 HVDDVVDGHIAAMEKGRSGERYLLT-GENASFMQIFDMAAVIT  251 (334)
Q Consensus       210 ~v~D~a~a~~~~~~~~~~g~~~~i~-g~~~s~~e~~~~i~~~~  251 (334)
                      +++|++++++.++..+..+..||++ ++..+..|+++.+.+.+
T Consensus       220 d~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  262 (276)
T PRK06482        220 DPQKMVQAMIASADQTPAPRRLTLGSDAYASIRAALSERLAAL  262 (276)
T ss_pred             CHHHHHHHHHHHHcCCCCCeEEecChHHHHHHHHHHHHHHHHH
Confidence            6899999999999877667789996 56678888877777655

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.91  E-value=2.2e-24  Score=186.21  Aligned_cols=216  Identities=17%  Similarity=0.157  Sum_probs=151.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CC-CCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+++.....    .. ...+.++.+|++|.+.+.++++       ++|+|
T Consensus         9 ~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~v   88 (262)
T PRK13394          9 TAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVDIL   88 (262)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            599999999999999999999999999999987532211    11 1257889999999998877665       38999


Q ss_pred             EEeccccCC------CCCCcccchhhhhHH----HHHHHHHH-HhcCCCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           70 FHTAALVEP------WLPDPSRFFAVNVEG----LKNVVQAA-KETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        70 ih~a~~~~~------~~~~~~~~~~~n~~~----~~~l~~~~-~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      ||+||....      ..++++..+++|+.+    +.++++.+ ++. +.+++|++||...+...+              .
T Consensus        89 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~~~~iv~~ss~~~~~~~~--------------~  153 (262)
T PRK13394         89 VSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDD-RGGVVIYMGSVHSHEASP--------------L  153 (262)
T ss_pred             EECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhc-CCcEEEEEcchhhcCCCC--------------C
Confidence            999997432      112345567899999    66677777 444 678999999965443211              1


Q ss_pred             cChHHHHHHHHHHHHHHHhh----cCCCEEEEecCceecCCCCCchhHHHHHHHHHH---cCCCCccccCCCCceeeeeH
Q 019878          139 CTQYERSKAVADKIALQAAS----EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERF---NGRLPGYIGYGNDRFSFCHV  211 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~~----~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~v  211 (334)
                      .+.|+.+|...+.+++.+..    .+++++++||+.++++...   +.+........   ......+++.+...++|+++
T Consensus       154 ~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (262)
T PRK13394        154 KSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVD---KQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTV  230 (262)
T ss_pred             CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhh---hhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCH
Confidence            35699999999888877652    4899999999999998531   11111110000   00000122334456789999


Q ss_pred             HHHHHHHHHHhhcCC---CCCeEEecC
Q 019878          212 DDVVDGHIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       212 ~D~a~a~~~~~~~~~---~g~~~~i~g  235 (334)
                      +|+++++..++....   .|+.|++.+
T Consensus       231 ~dva~a~~~l~~~~~~~~~g~~~~~~~  257 (262)
T PRK13394        231 EDVAQTVLFLSSFPSAALTGQSFVVSH  257 (262)
T ss_pred             HHHHHHHHHHcCccccCCcCCEEeeCC
Confidence            999999999987542   478898864

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.91  E-value=5.5e-22  Score=177.26  Aligned_cols=322  Identities=22%  Similarity=0.275  Sum_probs=217.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC---CeEEEEEcCCCCCCC--------------------CCCCCCeEEEEcCCCCh--
Q 019878            2 KILVSGASGYLGGRLCHALLKQG---HSVRALVRRTSDISG--------------------LPSEGALELVYGDVTDY--   56 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~--------------------~~~~~~v~~~~~Dl~d~--   56 (334)
                      +|||||||||+|.-+++.|+..-   .+++.+.|.+...+.                    .....++..+.||+.++  
T Consensus        14 ~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~~L   93 (467)
T KOG1221|consen   14 TIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEPDL   93 (467)
T ss_pred             eEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCccc
Confidence            69999999999999999999742   478888887654310                    01114788899999865  


Q ss_pred             ----hhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCc
Q 019878           57 ----RSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQV  132 (334)
Q Consensus        57 ----~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~  132 (334)
                          .......+.+|+|||+||-+.+. +........|+.|+.++++.|++....+-++|+||+++.- .. ...+|...
T Consensus        94 Gis~~D~~~l~~eV~ivih~AAtvrFd-e~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~-~~-~~i~E~~y  170 (467)
T KOG1221|consen   94 GISESDLRTLADEVNIVIHSAATVRFD-EPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNC-NV-GHIEEKPY  170 (467)
T ss_pred             CCChHHHHHHHhcCCEEEEeeeeeccc-hhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheec-cc-cccccccc
Confidence                44555677899999999987653 3345577899999999999999998889999999988872 11 11112111


Q ss_pred             ccc----------------------------ccccChHHHHHHHHHHHHHHHhhcCCCEEEEecCceecCCCCCchhHHH
Q 019878          133 HEE----------------------------KYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVA  184 (334)
Q Consensus       133 ~~~----------------------------~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~ilR~~~v~G~~~~~~~~~~~  184 (334)
                      +.+                            ..+.+.|.-+|+++|+++.... +++|++|+||+.|.+.-..+..+++.
T Consensus       171 ~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~-~~lPivIiRPsiI~st~~EP~pGWid  249 (467)
T KOG1221|consen  171 PMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA-ENLPLVIIRPSIITSTYKEPFPGWID  249 (467)
T ss_pred             CccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc-cCCCeEEEcCCceeccccCCCCCccc
Confidence            100                            1135789999999999999843 57999999999999864433333322


Q ss_pred             H------HHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhc--CCC----CCeEEec-C--CCCCHHHHHHHHHH
Q 019878          185 K------LMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEK--GRS----GERYLLT-G--ENASFMQIFDMAAV  249 (334)
Q Consensus       185 ~------~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~--~~~----g~~~~i~-g--~~~s~~e~~~~i~~  249 (334)
                      .      ++...-.|..-.+..+.+..-|+|.+|.++.+++.+.-.  ...    -.+||++ +  .++++.++.+...+
T Consensus       250 n~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e~~~~  329 (467)
T KOG1221|consen  250 NLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIELALR  329 (467)
T ss_pred             cCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHHHHHHH
Confidence            2      122222455555567777788999999999999976522  122    3499995 4  45899999999988


Q ss_pred             HhCCCC-------Ccc--cccHHHH--------HHHHHHHHHHHHHhCCCCCCCHHHH----------HHhhccceechH
Q 019878          250 ITGTSR-------PRF--CIPLWLI--------EAYGWILVFFSRITGKLPLISYPTV----------HVLAHQWAYSCV  302 (334)
Q Consensus       250 ~~g~~~-------~~~--~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~d~~  302 (334)
                      .....+       |..  .-..|..        .+-+.+.++..++.+..+.......          .+....|.+|++
T Consensus       330 ~~~~~Pl~~~iw~P~~~~~sn~~~f~~~~~~~h~lPa~~~d~~~~i~g~k~~~~k~~~ki~~~~~~l~~f~~~~w~Fd~~  409 (467)
T KOG1221|consen  330 YFEKIPLEKMIWYPFGTLTSNPWLFNLAAFLYHTLPAYILDLLLRLLGKKPRLVKLYRKIHKLVKLLEPFSLFKWIFDNK  409 (467)
T ss_pred             hcccCCcccceeccCceeeecHhHHHHHHHHHHHhhHHHHHHHHHHhCCChhhhHHHHHHHHHHHhhhhheeceEEecCc
Confidence            764321       111  1122222        3345667777777777765543321          223455566664


Q ss_pred             HHH-----------HhcCCCCC--CHHHHHHHHHHHHH
Q 019878          303 KAK-----------TELGYNPR--SLKEGLQEVLPWLR  327 (334)
Q Consensus       303 k~~-----------~~lG~~p~--~~~e~i~~~~~~~~  327 (334)
                      ...           +.++|.+.  +++|-+...+--++
T Consensus       410 n~~~L~~~~~~~d~~~f~fd~~~ldW~ey~~~~i~G~r  447 (467)
T KOG1221|consen  410 NTEKLREKMSEEDKRLFNFDMKQLDWEEYFNRHLLGLR  447 (467)
T ss_pred             cHHHHHHhCCHHHHhhcCCCcccCCHHHHHHHHHHHHH
Confidence            332           45688887  89998887776554

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.90  E-value=5.1e-23  Score=176.96  Aligned_cols=214  Identities=20%  Similarity=0.222  Sum_probs=150.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEcCCCChhhHHHHh-------cCCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDAC-------FGCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~-------~~~d~v   69 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+......+.     ...++.++.+|+.|.+++..++       .++|+|
T Consensus         3 ~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   82 (255)
T TIGR01963         3 TALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDIL   82 (255)
T ss_pred             EEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            6999999999999999999999999999999865332111     0125888999999998665444       458999


Q ss_pred             EEeccccCCC------CCCcccchhhhhHHHHHHHHHH----HhcCCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           70 FHTAALVEPW------LPDPSRFFAVNVEGLKNVVQAA----KETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        70 ih~a~~~~~~------~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      ||+|+.....      ..+.+..++.|+.++..+++.+    ++. +++++|++||...+...+.              .
T Consensus        83 i~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~~v~~ss~~~~~~~~~--------------~  147 (255)
T TIGR01963        83 VNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQ-GWGRIINIASAHGLVASPF--------------K  147 (255)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEEcchhhcCCCCC--------------C
Confidence            9999874321      1123456778999988888877    344 5779999999766543321              2


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCC-----ccccCCCCceeeee
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLP-----GYIGYGNDRFSFCH  210 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~  210 (334)
                      +.|+.+|.+.+.+.+.+.    +.+++++++||+.++++...   +.+......  .+...     .....+.+.+++++
T Consensus       148 ~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  222 (255)
T TIGR01963       148 SAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVE---KQIADQAKT--RGIPEEQVIREVMLPGQPTKRFVT  222 (255)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHH---HHHHhhhcc--cCCCchHHHHHHHHccCccccCcC
Confidence            569999999888887654    24899999999999987421   111111000  00000     01122445678999


Q ss_pred             HHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          211 VDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       211 v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      ++|+|+++..++...   ..|++|++++
T Consensus       223 ~~d~a~~~~~~~~~~~~~~~g~~~~~~~  250 (255)
T TIGR01963       223 VDEVAETALFLASDAAAGITGQAIVLDG  250 (255)
T ss_pred             HHHHHHHHHHHcCccccCccceEEEEcC
Confidence            999999999999763   2588999974

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.90  E-value=1.5e-22  Score=186.26  Aligned_cols=223  Identities=20%  Similarity=0.137  Sum_probs=158.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC--------------CCCCeEEEEcCCCChhhHHHHhcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP--------------SEGALELVYGDVTDYRSLVDACFGCH   67 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------------~~~~v~~~~~Dl~d~~~~~~~~~~~d   67 (334)
                      +||||||+|+||++++++|+++|++|++++|+..+...+.              ...+++++.+|+.|.+.+.+++.++|
T Consensus        82 vVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aLggiD  161 (576)
T PLN03209         82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPALGNAS  161 (576)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHhcCCC
Confidence            5999999999999999999999999999999876432110              01258899999999999999999999


Q ss_pred             EEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHH
Q 019878           68 VIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (334)
Q Consensus        68 ~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~  147 (334)
                      +|||++|.......+....+++|+.++.+++++|++. +++|||++||.+++....  .  ....    .....|...|.
T Consensus       162 iVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~a-gVgRIV~VSSiga~~~g~--p--~~~~----~sk~~~~~~Kr  232 (576)
T PLN03209        162 VVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVA-KVNHFILVTSLGTNKVGF--P--AAIL----NLFWGVLCWKR  232 (576)
T ss_pred             EEEEccccccccccchhhHHHHHHHHHHHHHHHHHHh-CCCEEEEEccchhcccCc--c--ccch----hhHHHHHHHHH
Confidence            9999998643222234556789999999999999997 689999999987642110  0  0000    01245777888


Q ss_pred             HHHHHHHHHhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC-
Q 019878          148 VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR-  226 (334)
Q Consensus       148 ~~E~~~~~~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-  226 (334)
                      .+|+.+..   .|++++++|||.++++.+.....           +.. .....+.....++..+|||++++.++.++. 
T Consensus       233 aaE~~L~~---sGIrvTIVRPG~L~tp~d~~~~t-----------~~v-~~~~~d~~~gr~isreDVA~vVvfLasd~~a  297 (576)
T PLN03209        233 KAEEALIA---SGLPYTIVRPGGMERPTDAYKET-----------HNL-TLSEEDTLFGGQVSNLQVAELMACMAKNRRL  297 (576)
T ss_pred             HHHHHHHH---cCCCEEEEECCeecCCccccccc-----------cce-eeccccccCCCccCHHHHHHHHHHHHcCchh
Confidence            88888765   79999999999999875321100           000 011111112235889999999999998654 


Q ss_pred             -CCCeEEec-CCC---CCHHHHHHHHH
Q 019878          227 -SGERYLLT-GEN---ASFMQIFDMAA  248 (334)
Q Consensus       227 -~g~~~~i~-g~~---~s~~e~~~~i~  248 (334)
                       .+.+|.+. ++.   .++.+++..+-
T Consensus       298 s~~kvvevi~~~~~p~~~~~~~~~~ip  324 (576)
T PLN03209        298 SYCKVVEVIAETTAPLTPMEELLAKIP  324 (576)
T ss_pred             ccceEEEEEeCCCCCCCCHHHHHHhcc
Confidence             47888885 432   45666665544

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.5e-22  Score=175.90  Aligned_cols=212  Identities=18%  Similarity=0.149  Sum_probs=151.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CC-CCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+.......    .. ...+.++.+|++|.+++.++++       ++|+|
T Consensus        12 ~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v   91 (274)
T PRK07775         12 PALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIEVL   91 (274)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            599999999999999999999999999999875432211    10 1257888999999998877665       47999


Q ss_pred             EEeccccCCC------CCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           70 FHTAALVEPW------LPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        70 ih~a~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      ||+||.....      .+++...+++|+.++.++++.+.+.   .+..+||++||...+.+.+.              .+
T Consensus        92 i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~--------------~~  157 (274)
T PRK07775         92 VSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPH--------------MG  157 (274)
T ss_pred             EECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCC--------------cc
Confidence            9999974321      1223456789999999999887642   23458999999877754321              25


Q ss_pred             hHHHHHHHHHHHHHHHhh----cCCCEEEEecCceecC-CCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          141 QYERSKAVADKIALQAAS----EGLPIVPVYPGVIYGP-GKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~~----~g~~~~ilR~~~v~G~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      .|+.+|.+.|.+.+.+..    .|++++++|||.+.++ +.......+..++.....      ++ +...+.++|++|++
T Consensus       158 ~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~dva  230 (274)
T PRK07775        158 AYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAK------WG-QARHDYFLRASDLA  230 (274)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHH------hc-ccccccccCHHHHH
Confidence            699999999999988753    3899999999988654 221111111122211111      01 12345699999999


Q ss_pred             HHHHHHhhcCCCCCeEEec
Q 019878          216 DGHIAAMEKGRSGERYLLT  234 (334)
Q Consensus       216 ~a~~~~~~~~~~g~~~~i~  234 (334)
                      +++..+++++..+.+||+.
T Consensus       231 ~a~~~~~~~~~~~~~~~~~  249 (274)
T PRK07775        231 RAITFVAETPRGAHVVNME  249 (274)
T ss_pred             HHHHHHhcCCCCCCeeEEe
Confidence            9999999887667788884

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.90  E-value=7e-23  Score=175.64  Aligned_cols=213  Identities=20%  Similarity=0.155  Sum_probs=153.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CCC-CCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      |+||||||+|+||.++++.|+++|++|++++|+.++...    +.. ..++.++.+|+.|.+++.++++       ++|+
T Consensus         7 ~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   86 (251)
T PRK12826          7 RVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRLDI   86 (251)
T ss_pred             CEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            469999999999999999999999999999998543211    111 1258899999999998888774       5899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      |||+|+....      ..+++...++.|+.++.++++++.+.   .+.+++|++||...++...             .+.
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~-------------~~~  153 (251)
T PRK12826         87 LVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGY-------------PGL  153 (251)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCC-------------CCc
Confidence            9999987432      11234567899999999999988532   2467999999987662110             113


Q ss_pred             ChHHHHHHHHHHHHHHHhh----cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          140 TQYERSKAVADKIALQAAS----EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~~----~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      +.|+.+|.+.+.+++.+..    .|++++++||+.++|+.......   ..+........+        ...+++++|++
T Consensus       154 ~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~---~~~~~~~~~~~~--------~~~~~~~~dva  222 (251)
T PRK12826        154 AHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGD---AQWAEAIAAAIP--------LGRLGEPEDIA  222 (251)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCc---hHHHHHHHhcCC--------CCCCcCHHHHH
Confidence            6799999999988887643    48999999999999986422111   111111111111        12588999999


Q ss_pred             HHHHHHhhcCC---CCCeEEecCCC
Q 019878          216 DGHIAAMEKGR---SGERYLLTGEN  237 (334)
Q Consensus       216 ~a~~~~~~~~~---~g~~~~i~g~~  237 (334)
                      +++..++....   .|++|++.|+.
T Consensus       223 ~~~~~l~~~~~~~~~g~~~~~~~g~  247 (251)
T PRK12826        223 AAVLFLASDEARYITGQTLPVDGGA  247 (251)
T ss_pred             HHHHHHhCccccCcCCcEEEECCCc
Confidence            99999887542   58999997543

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.89  E-value=3.8e-22  Score=170.90  Aligned_cols=216  Identities=19%  Similarity=0.159  Sum_probs=151.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC-CCC----CCC-CCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISG----LPS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~----~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+.+. ...    +.. ..++.++.+|++|.+++.++++       ++|+
T Consensus         8 ~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   87 (248)
T PRK07806          8 TALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGGLDA   87 (248)
T ss_pred             EEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCcE
Confidence            59999999999999999999999999999987532 110    111 1257889999999998877664       4899


Q ss_pred             EEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHH
Q 019878           69 IFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (334)
Q Consensus        69 vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~  147 (334)
                      |||+|+.......++...+++|+.++.++++++.+.. ...++|++||........    .+.  .+   ..++|+.+|.
T Consensus        88 vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~----~~~--~~---~~~~Y~~sK~  158 (248)
T PRK07806         88 LVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT----VKT--MP---EYEPVARSKR  158 (248)
T ss_pred             EEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc----ccC--Cc---cccHHHHHHH
Confidence            9999986433334566788999999999999998752 224899999954321110    000  01   1367999999


Q ss_pred             HHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccc-cCCCCceeeeeHHHHHHHHHHHh
Q 019878          148 VADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYI-GYGNDRFSFCHVDDVVDGHIAAM  222 (334)
Q Consensus       148 ~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~D~a~a~~~~~  222 (334)
                      +.|.+++.+.    ..|+++++++|+.+-++..       ..++.    ...+... ........+++++|++++++.++
T Consensus       159 a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~-------~~~~~----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  227 (248)
T PRK07806        159 AGEDALRALRPELAEKGIGFVVVSGDMIEGTVT-------ATLLN----RLNPGAIEARREAAGKLYTVSEFAAEVARAV  227 (248)
T ss_pred             HHHHHHHHHHHHhhccCeEEEEeCCccccCchh-------hhhhc----cCCHHHHHHHHhhhcccCCHHHHHHHHHHHh
Confidence            9999988864    3589999999887766421       11110    0000000 00011236899999999999999


Q ss_pred             hcCC-CCCeEEecCCC
Q 019878          223 EKGR-SGERYLLTGEN  237 (334)
Q Consensus       223 ~~~~-~g~~~~i~g~~  237 (334)
                      +... .|++|+++|..
T Consensus       228 ~~~~~~g~~~~i~~~~  243 (248)
T PRK07806        228 TAPVPSGHIEYVGGAD  243 (248)
T ss_pred             hccccCccEEEecCcc
Confidence            8664 69999997643

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.89  E-value=3.1e-23  Score=178.63  Aligned_cols=215  Identities=20%  Similarity=0.214  Sum_probs=149.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      +||||||+|+||++++++|+++|++|++++|++++...+.     ...++.++.+|+.|.+++.++++       .+|+|
T Consensus         6 ~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~v   85 (258)
T PRK12429          6 VALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVDIL   85 (258)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5999999999999999999999999999999876432211     11368899999999998877765       58999


Q ss_pred             EEeccccCCC------CCCcccchhhhhHHHHHHHHHH----HhcCCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           70 FHTAALVEPW------LPDPSRFFAVNVEGLKNVVQAA----KETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        70 ih~a~~~~~~------~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      ||+|+.....      ..+.+..+++|+.++.++++.+    ++. +.++||++||...+.+...              .
T Consensus        86 i~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~--------------~  150 (258)
T PRK12429         86 VNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQ-GGGRIINMASVHGLVGSAG--------------K  150 (258)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-CCeEEEEEcchhhccCCCC--------------c
Confidence            9999864321      1223446778999955555554    444 5789999999766543221              3


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCC-----ccccCCCCceeeee
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLP-----GYIGYGNDRFSFCH  210 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~  210 (334)
                      +.|+.+|.+.+.+.+.+.    ..++++.++||+.++++....   .+......  .+...     ..++.....+.|++
T Consensus       151 ~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  225 (258)
T PRK12429        151 AAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRK---QIPDLAKE--RGISEEEVLEDVLLPLVPQKRFTT  225 (258)
T ss_pred             chhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhh---hhhhhccc--cCCChHHHHHHHHhccCCccccCC
Confidence            679999998888777653    358999999999999875321   11110000  00000     01122234467999


Q ss_pred             HHHHHHHHHHHhhcCC---CCCeEEecCC
Q 019878          211 VDDVVDGHIAAMEKGR---SGERYLLTGE  236 (334)
Q Consensus       211 v~D~a~a~~~~~~~~~---~g~~~~i~g~  236 (334)
                      ++|+++++..++....   .|+.|+++|+
T Consensus       226 ~~d~a~~~~~l~~~~~~~~~g~~~~~~~g  254 (258)
T PRK12429        226 VEEIADYALFLASFAAKGVTGQAWVVDGG  254 (258)
T ss_pred             HHHHHHHHHHHcCccccCccCCeEEeCCC
Confidence            9999999999987532   4788998753

>PRK09135 pteridine reductase; Provisional

Probab=99.89  E-value=3.9e-22  Score=170.82  Aligned_cols=212  Identities=17%  Similarity=0.192  Sum_probs=145.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC-CCC----CCC--CCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISG----LPS--EGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~----~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      +||||||+|+||++++++|+++|++|++++|+... ...    +..  ...+.++.+|++|.+++..+++       ++|
T Consensus         8 ~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d   87 (249)
T PRK09135          8 VALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFGRLD   87 (249)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            59999999999999999999999999999987432 111    111  1258899999999998887765       479


Q ss_pred             EEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC--CCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        68 ~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      +|||+||....      ...+++..+++|+.++.++++++.+..  .-..++.+|+....  .         +   .++.
T Consensus        88 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~---------~---~~~~  153 (249)
T PRK09135         88 ALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAE--R---------P---LKGY  153 (249)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhc--C---------C---CCCc
Confidence            99999996322      112345688899999999999997531  12356665542211  1         1   1124


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHH
Q 019878          140 TQYERSKAVADKIALQAASE---GLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVD  216 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~~~---g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  216 (334)
                      +.|+.+|.++|.+++.+.+.   +++++++||+.++|+.....  + ............+ .       ..+.+++|+++
T Consensus       154 ~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~--~-~~~~~~~~~~~~~-~-------~~~~~~~d~a~  222 (249)
T PRK09135        154 PVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNS--F-DEEARQAILARTP-L-------KRIGTPEDIAE  222 (249)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCcccccc--C-CHHHHHHHHhcCC-c-------CCCcCHHHHHH
Confidence            78999999999999987642   69999999999999975321  1 1222222212221 1       11234899999


Q ss_pred             HHHHHhhcC--CCCCeEEec-CCCC
Q 019878          217 GHIAAMEKG--RSGERYLLT-GENA  238 (334)
Q Consensus       217 a~~~~~~~~--~~g~~~~i~-g~~~  238 (334)
                      ++..++...  ..|++||++ |+..
T Consensus       223 ~~~~~~~~~~~~~g~~~~i~~g~~~  247 (249)
T PRK09135        223 AVRFLLADASFITGQILAVDGGRSL  247 (249)
T ss_pred             HHHHHcCccccccCcEEEECCCeec
Confidence            997666543  368999996 4544

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.89  E-value=3.9e-22  Score=173.55  Aligned_cols=229  Identities=19%  Similarity=0.188  Sum_probs=162.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----C---CCCCeEEEEcCCCChhhHHHHhc-------CC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P---SEGALELVYGDVTDYRSLVDACF-------GC   66 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~---~~~~v~~~~~Dl~d~~~~~~~~~-------~~   66 (334)
                      +++|||||+|+||+++++.|+++|++|++++|+.++....    .   ...++.++.+|+.|.+++.++++       ++
T Consensus         8 k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   87 (276)
T PRK05875          8 RTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGRL   87 (276)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4699999999999999999999999999999976532211    1   01367889999999998877765       58


Q ss_pred             CEEEEeccccCC-------CCCCcccchhhhhHHHHHHHHHHHhcC---CCcEEEEecccceeccCCCccCCCCCccccc
Q 019878           67 HVIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (334)
Q Consensus        67 d~vih~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~  136 (334)
                      |+|||+||....       ..+++...++.|+.++.++++++.+..   +..++|++||...+...+             
T Consensus        88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-------------  154 (276)
T PRK05875         88 HGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHR-------------  154 (276)
T ss_pred             CEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCC-------------
Confidence            999999985321       112245578899999999998876541   235899999987754322             


Q ss_pred             cccChHHHHHHHHHHHHHHHhh----cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHH
Q 019878          137 YFCTQYERSKAVADKIALQAAS----EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVD  212 (334)
Q Consensus       137 ~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  212 (334)
                       +.+.|+.+|.+.|.+++.+..    .+++++++||+.+.++....... ............         ....+++++
T Consensus       155 -~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~-~~~~~~~~~~~~---------~~~~~~~~~  223 (276)
T PRK05875        155 -WFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITE-SPELSADYRACT---------PLPRVGEVE  223 (276)
T ss_pred             -CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccccccc-CHHHHHHHHcCC---------CCCCCcCHH
Confidence             136799999999999987652    47999999999998764211100 011111111111         123367799


Q ss_pred             HHHHHHHHHhhcCC---CCCeEEec-CCCC----CHHHHHHHHHHHhCC
Q 019878          213 DVVDGHIAAMEKGR---SGERYLLT-GENA----SFMQIFDMAAVITGT  253 (334)
Q Consensus       213 D~a~a~~~~~~~~~---~g~~~~i~-g~~~----s~~e~~~~i~~~~g~  253 (334)
                      |+++++..++..+.   .|++++++ |+.+    +..|+++.+.+..+.
T Consensus       224 dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  272 (276)
T PRK05875        224 DVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADGL  272 (276)
T ss_pred             HHHHHHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHHH
Confidence            99999999998754   48899996 5554    778888777765443

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.89  E-value=8.5e-23  Score=177.57  Aligned_cols=225  Identities=20%  Similarity=0.113  Sum_probs=159.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      +||||||+|+||+++++.|+++|++|++++|+++....+..  ...+.++.+|++|.+++.++++       ++|+|||+
T Consensus         5 ~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~   84 (275)
T PRK08263          5 VWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVVNN   84 (275)
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            59999999999999999999999999999998654322111  1257889999999988876654       47999999


Q ss_pred             ccccCC------CCCCcccchhhhhHHHHHHHHHH----HhcCCCcEEEEecccceeccCCCccCCCCCccccccccChH
Q 019878           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAA----KETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (334)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y  142 (334)
                      ||....      ..+++...+++|+.++.++++.+    ++. +.+++|++||...+.+...              .+.|
T Consensus        85 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~~--------------~~~Y  149 (275)
T PRK08263         85 AGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQ-RSGHIIQISSIGGISAFPM--------------SGIY  149 (275)
T ss_pred             CCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEEcChhhcCCCCC--------------ccHH
Confidence            997432      12345667899999998888876    343 4679999999877754332              2569


Q ss_pred             HHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCc------hhHHHHHHHHHHcCCCCccccCCCCceee-eeH
Q 019878          143 ERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTT------GNLVAKLMIERFNGRLPGYIGYGNDRFSF-CHV  211 (334)
Q Consensus       143 ~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~v  211 (334)
                      +.+|++.+.+.+.+.    .+|++++++||+.+..+.....      ...........         ......+.+ +.+
T Consensus       150 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~p  220 (275)
T PRK08263        150 HASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREEL---------AEQWSERSVDGDP  220 (275)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHH---------HHHHHhccCCCCH
Confidence            999999888777654    3589999999998876542100      00011111111         001122245 789


Q ss_pred             HHHHHHHHHHhhcCCC-CCeEEecC-CCCCHHHHHHHHHHH
Q 019878          212 DDVVDGHIAAMEKGRS-GERYLLTG-ENASFMQIFDMAAVI  250 (334)
Q Consensus       212 ~D~a~a~~~~~~~~~~-g~~~~i~g-~~~s~~e~~~~i~~~  250 (334)
                      +|++++++.+++.+.. +.+|+.++ +.+++.++.+.+.+.
T Consensus       221 ~dva~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (275)
T PRK08263        221 EAAAEALLKLVDAENPPLRLFLGSGVLDLAKADYERRLATW  261 (275)
T ss_pred             HHHHHHHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHH
Confidence            9999999999998764 44444444 568888988888774

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=1.4e-21  Score=167.28  Aligned_cols=208  Identities=21%  Similarity=0.188  Sum_probs=151.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC-CC-----CCCCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-GL-----PSEGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~-----~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      |+||||||+|+||++|+++|+++|++|+++.|+..... .+     ....++.++.+|+.|.+.+.++++       ++|
T Consensus         7 ~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id   86 (249)
T PRK12825          7 RVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGRID   86 (249)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCCCC
Confidence            36999999999999999999999999988777654210 00     011268899999999998877764       479


Q ss_pred             EEEEeccccCCC------CCCcccchhhhhHHHHHHHHHHH----hcCCCcEEEEecccceeccCCCccCCCCCcccccc
Q 019878           68 VIFHTAALVEPW------LPDPSRFFAVNVEGLKNVVQAAK----ETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        68 ~vih~a~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~  137 (334)
                      +|||+||.....      .+++...++.|+.++.++++.+.    +. +.+++|++||...+.+...             
T Consensus        87 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~i~~SS~~~~~~~~~-------------  152 (249)
T PRK12825         87 ILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQ-RGGRIVNISSVAGLPGWPG-------------  152 (249)
T ss_pred             EEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEECccccCCCCCC-------------
Confidence            999999964321      12335678899999999999884    43 5789999999887744321             


Q ss_pred             ccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHH
Q 019878          138 FCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                       ...|+.+|.+.+.....+.    +.|++++++||+.++|+.....  ........     .+     ......+++.+|
T Consensus       153 -~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~--~~~~~~~~-----~~-----~~~~~~~~~~~d  219 (249)
T PRK12825        153 -RSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEAT--IEEAREAK-----DA-----ETPLGRSGTPED  219 (249)
T ss_pred             -chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccc--cchhHHhh-----hc-----cCCCCCCcCHHH
Confidence             2669999999988887654    2589999999999999864221  11111111     00     011223899999


Q ss_pred             HHHHHHHHhhcCC---CCCeEEecC
Q 019878          214 VVDGHIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       214 ~a~a~~~~~~~~~---~g~~~~i~g  235 (334)
                      +++++..++....   .|++|+++|
T Consensus       220 va~~~~~~~~~~~~~~~g~~~~i~~  244 (249)
T PRK12825        220 IARAVAFLCSDASDYITGQVIEVTG  244 (249)
T ss_pred             HHHHHHHHhCccccCcCCCEEEeCC
Confidence            9999999997642   589999964

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.88  E-value=5.3e-23  Score=174.41  Aligned_cols=221  Identities=26%  Similarity=0.325  Sum_probs=160.1

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC--CCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCCC
Q 019878            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD--ISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (334)
Q Consensus         3 ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~   80 (334)
                      |+|+||||.+|+++++.|++.+++|+++.|+.++  ...+.. .+++++.+|+.|.+++.++++++|+||.+.+...   
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~-~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~---   76 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQA-LGAEVVEADYDDPESLVAALKGVDAVFSVTPPSH---   76 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHH-TTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSC---
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhc-ccceEeecccCCHHHHHHHHcCCceEEeecCcch---
Confidence            7999999999999999999999999999998742  112222 2688999999999999999999999998876432   


Q ss_pred             CCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHhhcC
Q 019878           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEG  160 (334)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g  160 (334)
                             ..-+....+++++|++. ++++||+.|....+.....       ..+    ..+.-..|...|+.+++   .+
T Consensus        77 -------~~~~~~~~~li~Aa~~a-gVk~~v~ss~~~~~~~~~~-------~~p----~~~~~~~k~~ie~~l~~---~~  134 (233)
T PF05368_consen   77 -------PSELEQQKNLIDAAKAA-GVKHFVPSSFGADYDESSG-------SEP----EIPHFDQKAEIEEYLRE---SG  134 (233)
T ss_dssp             -------CCHHHHHHHHHHHHHHH-T-SEEEESEESSGTTTTTT-------STT----HHHHHHHHHHHHHHHHH---CT
T ss_pred             -------hhhhhhhhhHHHhhhcc-ccceEEEEEeccccccccc-------ccc----cchhhhhhhhhhhhhhh---cc
Confidence                   33455668999999999 6999997664333321100       000    12344578888888877   69


Q ss_pred             CCEEEEecCceecCCCCCchhHHHHHHHH-HHcCC--CCccccCCCCceeee-eHHHHHHHHHHHhhcCCC---CCeEEe
Q 019878          161 LPIVPVYPGVIYGPGKLTTGNLVAKLMIE-RFNGR--LPGYIGYGNDRFSFC-HVDDVVDGHIAAMEKGRS---GERYLL  233 (334)
Q Consensus       161 ~~~~ilR~~~v~G~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~i-~v~D~a~a~~~~~~~~~~---g~~~~i  233 (334)
                      ++++++|++.++..       ++..+... ...+.  ...+.++++....++ ..+|++++++.++.++..   +..+.+
T Consensus       135 i~~t~i~~g~f~e~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~  207 (233)
T PF05368_consen  135 IPYTIIRPGFFMEN-------LLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFL  207 (233)
T ss_dssp             SEBEEEEE-EEHHH-------HHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEE
T ss_pred             ccceeccccchhhh-------hhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEe
Confidence            99999999987643       11111110 11221  245667777777785 999999999999988643   577888


Q ss_pred             cCCCCCHHHHHHHHHHHhCCCCC
Q 019878          234 TGENASFMQIFDMAAVITGTSRP  256 (334)
Q Consensus       234 ~g~~~s~~e~~~~i~~~~g~~~~  256 (334)
                      +++.+|+.|+++.+.+.+|++.+
T Consensus       208 ~~~~~t~~eia~~~s~~~G~~v~  230 (233)
T PF05368_consen  208 AGETLTYNEIAAILSKVLGKKVK  230 (233)
T ss_dssp             GGGEEEHHHHHHHHHHHHTSEEE
T ss_pred             CCCCCCHHHHHHHHHHHHCCccE
Confidence            88889999999999999998754

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.88  E-value=1.4e-22  Score=174.51  Aligned_cols=219  Identities=23%  Similarity=0.222  Sum_probs=153.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+......+..  ...+.++.+|++|.+++.++++       .+|++||+
T Consensus         8 ~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~   87 (257)
T PRK07067          8 VALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILFNN   87 (257)
T ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            49999999999999999999999999999998764322111  1258889999999988877765       48999999


Q ss_pred             ccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC----CCcEEEEecccceeccCCCccCCCCCccccccccChH
Q 019878           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (334)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y  142 (334)
                      ||....      ..+++...+++|+.++.++++++.+..    ...++|++||.....+.+              +.+.|
T Consensus        88 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------------~~~~Y  153 (257)
T PRK07067         88 AALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEA--------------LVSHY  153 (257)
T ss_pred             CCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCC--------------CCchh
Confidence            986422      112455678999999999999997541    124899999964322111              13679


Q ss_pred             HHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHH
Q 019878          143 ERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGH  218 (334)
Q Consensus       143 ~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  218 (334)
                      +.+|.+.+.+.+.+.    ++|++++++||+.++++........+.... ....+......+.+...+.+.+++|+|+++
T Consensus       154 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  232 (257)
T PRK07067        154 CATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYE-NRPPGEKKRLVGEAVPLGRMGVPDDLTGMA  232 (257)
T ss_pred             hhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhcc-CCCHHHHHHHHhhcCCCCCccCHHHHHHHH
Confidence            999999888887654    468999999999999974211111110000 000000011122334456799999999999


Q ss_pred             HHHhhcCC---CCCeEEecC
Q 019878          219 IAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       219 ~~~~~~~~---~g~~~~i~g  235 (334)
                      ..++....   .|++|++.|
T Consensus       233 ~~l~s~~~~~~~g~~~~v~g  252 (257)
T PRK07067        233 LFLASADADYIVAQTYNVDG  252 (257)
T ss_pred             HHHhCcccccccCcEEeecC
Confidence            99987642   589999964

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.88  E-value=9.3e-22  Score=169.38  Aligned_cols=224  Identities=20%  Similarity=0.155  Sum_probs=159.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC---CCCCeEEEEcCCCChhhHHHHhc-------CCCEEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP---SEGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih   71 (334)
                      ++|||||+|+||.++++.|+++|++|++++|++.+...+.   ...++.++.+|+.|.+++..+++       ++|+|||
T Consensus         4 ~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~   83 (257)
T PRK07074          4 TALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVLVA   83 (257)
T ss_pred             EEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4999999999999999999999999999999865432111   11258899999999998877765       3899999


Q ss_pred             eccccCCC---CCC---cccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChH
Q 019878           72 TAALVEPW---LPD---PSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (334)
Q Consensus        72 ~a~~~~~~---~~~---~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y  142 (334)
                      +||.....   ..+   ....+..|+.++.++++++...   .+.+++|++||...+....               ...|
T Consensus        84 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------------~~~y  148 (257)
T PRK07074         84 NAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAALG---------------HPAY  148 (257)
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCCC---------------Cccc
Confidence            99974321   111   2334678999999988888432   2456899999964432111               1359


Q ss_pred             HHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHH
Q 019878          143 ERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGH  218 (334)
Q Consensus       143 ~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  218 (334)
                      +.+|.+.+.+++.+.    .+|+++..+||+.++++...........+......         ....++|++++|+++++
T Consensus       149 ~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~d~a~~~  219 (257)
T PRK07074        149 SAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKK---------WYPLQDFATPDDVANAV  219 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHh---------cCCCCCCCCHHHHHHHH
Confidence            999999998888765    34899999999999887532111101111111111         11235799999999999


Q ss_pred             HHHhhcC---CCCCeEEec-CCCCCHHHHHHHHHH
Q 019878          219 IAAMEKG---RSGERYLLT-GENASFMQIFDMAAV  249 (334)
Q Consensus       219 ~~~~~~~---~~g~~~~i~-g~~~s~~e~~~~i~~  249 (334)
                      ..++...   ..|.++++. |...+..|+++.+.+
T Consensus       220 ~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~  254 (257)
T PRK07074        220 LFLASPAARAITGVCLPVDGGLTAGNREMARTLTL  254 (257)
T ss_pred             HHHcCchhcCcCCcEEEeCCCcCcCChhhhhhhcc
Confidence            9999653   258888885 577889999887754

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.88  E-value=9.5e-22  Score=170.74  Aligned_cols=228  Identities=18%  Similarity=0.109  Sum_probs=154.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CC-CCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+.+.....    .. ..++.++.+|++|.+++.++++       ++|+|
T Consensus         8 ~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~l   87 (275)
T PRK05876          8 GAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHVDVV   87 (275)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            499999999999999999999999999999886543211    11 1257889999999998877764       37999


Q ss_pred             EEeccccCC------CCCCcccchhhhhHHHHHHHHHHHh----cCCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKE----TKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        70 ih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      ||+||....      ..++.+..+++|+.++.++++++..    .+..+++|++||...+.+..              +.
T Consensus        88 i~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~--------------~~  153 (275)
T PRK05876         88 FSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNA--------------GL  153 (275)
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCC--------------CC
Confidence            999997422      1123455789999999999998863    22246899999987764322              13


Q ss_pred             ChHHHHHHH----HHHHHHHHhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          140 TQYERSKAV----ADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       140 ~~Y~~sK~~----~E~~~~~~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      +.|+.+|.+    +|.+..++..+|+++++++|+.+.++.........   .............+.....+++++++|+|
T Consensus       154 ~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~dva  230 (275)
T PRK05876        154 GAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIR---GAACAQSSTTGSPGPLPLQDDNLGVDDIA  230 (275)
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhc---CccccccccccccccccccccCCCHHHHH
Confidence            679999996    55555555566999999999999876422110000   00000111111233334556899999999


Q ss_pred             HHHHHHhhcCCCCCeEEecCCCCCHHHHHHHHHHH
Q 019878          216 DGHIAAMEKGRSGERYLLTGENASFMQIFDMAAVI  250 (334)
Q Consensus       216 ~a~~~~~~~~~~g~~~~i~g~~~s~~e~~~~i~~~  250 (334)
                      ++++.++.+.   +.|.+.+. ....++.+...+.
T Consensus       231 ~~~~~ai~~~---~~~~~~~~-~~~~~~~~~~~~~  261 (275)
T PRK05876        231 QLTADAILAN---RLYVLPHA-ASRASIRRRFERI  261 (275)
T ss_pred             HHHHHHHHcC---CeEEecCh-hhHHHHHHHHHHH
Confidence            9999999863   45666532 3445555555444

>PRK06182 short chain dehydrogenase; Validated

Probab=99.88  E-value=7.8e-22  Score=171.37  Aligned_cols=214  Identities=21%  Similarity=0.173  Sum_probs=145.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~a   73 (334)
                      ++++||||+|+||++++++|+++|++|++++|+.++...+.. .+++++.+|++|.+++.++++       ++|+|||+|
T Consensus         4 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~a   82 (273)
T PRK06182          4 KVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS-LGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNA   82 (273)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            369999999999999999999999999999998765433322 258899999999999887775       589999999


Q ss_pred             cccCC------CCCCcccchhhhhHHHHHH----HHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHH
Q 019878           74 ALVEP------WLPDPSRFFAVNVEGLKNV----VQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (334)
Q Consensus        74 ~~~~~------~~~~~~~~~~~n~~~~~~l----~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (334)
                      |....      ..++++..+++|+.++..+    +..+++. +.+++|++||...+...+              ....|+
T Consensus        83 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~g~iv~isS~~~~~~~~--------------~~~~Y~  147 (273)
T PRK06182         83 GYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQ-RSGRIINISSMGGKIYTP--------------LGAWYH  147 (273)
T ss_pred             CcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhc-CCCEEEEEcchhhcCCCC--------------CccHhH
Confidence            97432      1234566788999885444    4455555 467999999965432211              125699


Q ss_pred             HHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCC--------ccccCCCCceeeeeH
Q 019878          144 RSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLP--------GYIGYGNDRFSFCHV  211 (334)
Q Consensus       144 ~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~i~v  211 (334)
                      .+|.+.+.+.+.+.    ++|++++++||+.+.++......    ..+.....+...        ..+......+.+..+
T Consensus       148 ~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (273)
T PRK06182        148 ATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAA----DHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDP  223 (273)
T ss_pred             HHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhh----hhhcccccccchHHHHHHHHHHHHHhhccccCCCH
Confidence            99999998776543    45899999999999887421100    000000000000        000011122346789


Q ss_pred             HHHHHHHHHHhhcCCCCCeEEec
Q 019878          212 DDVVDGHIAAMEKGRSGERYLLT  234 (334)
Q Consensus       212 ~D~a~a~~~~~~~~~~g~~~~i~  234 (334)
                      +|+|++++.++........|+++
T Consensus       224 ~~vA~~i~~~~~~~~~~~~~~~g  246 (273)
T PRK06182        224 SVIADAISKAVTARRPKTRYAVG  246 (273)
T ss_pred             HHHHHHHHHHHhCCCCCceeecC
Confidence            99999999999875555667664

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.4e-21  Score=170.09  Aligned_cols=215  Identities=21%  Similarity=0.169  Sum_probs=148.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC--CCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      +||||||+|+||+++++.|+++|++|++++|++++...+...  .++.++.+|++|.+++.++++       ++|+|||+
T Consensus         6 ~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv~~   85 (277)
T PRK06180          6 TWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLVNN   85 (277)
T ss_pred             EEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            599999999999999999999999999999987643322211  257889999999998877765       47999999


Q ss_pred             ccccCC--CC----CCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChHH
Q 019878           73 AALVEP--WL----PDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (334)
Q Consensus        73 a~~~~~--~~----~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (334)
                      ||....  ..    .+....+++|+.++.++++++..+   .+.+++|++||...+...+              +.+.|+
T Consensus        86 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~--------------~~~~Y~  151 (277)
T PRK06180         86 AGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMP--------------GIGYYC  151 (277)
T ss_pred             CCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCC--------------CcchhH
Confidence            997432  11    123456899999999999996442   2456999999976654322              136799


Q ss_pred             HHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCc----hhHHHH---HHHHHHcCCCCccccCCCCceeeeeHH
Q 019878          144 RSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTT----GNLVAK---LMIERFNGRLPGYIGYGNDRFSFCHVD  212 (334)
Q Consensus       144 ~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~v~  212 (334)
                      .+|.+.|.+.+.+.    ..|++++++||+.+.++.....    ......   .+.......   ..   .....+..++
T Consensus       152 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~  225 (277)
T PRK06180        152 GSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAR---EA---KSGKQPGDPA  225 (277)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHH---Hh---hccCCCCCHH
Confidence            99999998887765    2489999999999977532110    000111   111100000   00   0112356799


Q ss_pred             HHHHHHHHHhhcCCCCCeEEecCC
Q 019878          213 DVVDGHIAAMEKGRSGERYLLTGE  236 (334)
Q Consensus       213 D~a~a~~~~~~~~~~g~~~~i~g~  236 (334)
                      |+++++..++..+.....|.++.+
T Consensus       226 dva~~~~~~l~~~~~~~~~~~g~~  249 (277)
T PRK06180        226 KAAQAILAAVESDEPPLHLLLGSD  249 (277)
T ss_pred             HHHHHHHHHHcCCCCCeeEeccHH
Confidence            999999999987765545555433

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=5.3e-21  Score=164.56  Aligned_cols=209  Identities=21%  Similarity=0.162  Sum_probs=149.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC-C----CCC-CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-S----GLP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~----~~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+.... .    .+. ...++.++.+|++|.+++.++++       .+|+
T Consensus         4 ~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (256)
T PRK12745          4 VALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRIDC   83 (256)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            499999999999999999999999999999875321 0    011 11268899999999988776654       5899


Q ss_pred             EEEeccccCCC--------CCCcccchhhhhHHHHHHHHHHHhc----CC-----CcEEEEecccceeccCCCccCCCCC
Q 019878           69 IFHTAALVEPW--------LPDPSRFFAVNVEGLKNVVQAAKET----KT-----VEKIIYTSSFFALGSTDGYIADENQ  131 (334)
Q Consensus        69 vih~a~~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~----~~-----~~~~v~~Ss~~v~~~~~~~~~~e~~  131 (334)
                      |||+||.....        .+.+...+++|+.++.++++++.+.    ..     .+++|++||...+.+...       
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------  156 (256)
T PRK12745         84 LVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPN-------  156 (256)
T ss_pred             EEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCC-------
Confidence            99999874321        1234557899999999999888653    11     567999999776543321       


Q ss_pred             ccccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCcee
Q 019878          132 VHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFS  207 (334)
Q Consensus       132 ~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (334)
                             .+.|+.+|.+.|.+.+.+.    ++|++++++||+.+.++......   ... .+.......       ....
T Consensus       157 -------~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~---~~~-~~~~~~~~~-------~~~~  218 (256)
T PRK12745        157 -------RGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVT---AKY-DALIAKGLV-------PMPR  218 (256)
T ss_pred             -------CcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccc---hhH-HhhhhhcCC-------CcCC
Confidence                   2669999999999888765    36899999999999987532211   111 111111111       1235


Q ss_pred             eeeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          208 FCHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       208 ~i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      |.+++|+++++..++...   ..|.+|++.|
T Consensus       219 ~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~g  249 (256)
T PRK12745        219 WGEPEDVARAVAALASGDLPYSTGQAIHVDG  249 (256)
T ss_pred             CcCHHHHHHHHHHHhCCcccccCCCEEEECC
Confidence            779999999999988654   3588999965

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.87  E-value=9.4e-22  Score=171.52  Aligned_cols=216  Identities=21%  Similarity=0.159  Sum_probs=149.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC-------CCCCCeEEEEcCCCChhhHHHHh-------cCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-------PSEGALELVYGDVTDYRSLVDAC-------FGCH   67 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~~v~~~~~Dl~d~~~~~~~~-------~~~d   67 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+++....+       ....+++++.+|++|.+++.+ +       .++|
T Consensus         5 ~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~id   83 (280)
T PRK06914          5 IAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGRID   83 (280)
T ss_pred             EEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCCee
Confidence            389999999999999999999999999999986532211       111368999999999988765 3       2479


Q ss_pred             EEEEeccccCCC------CCCcccchhhhhHHHHHHHHHH----HhcCCCcEEEEecccceeccCCCccCCCCCcccccc
Q 019878           68 VIFHTAALVEPW------LPDPSRFFAVNVEGLKNVVQAA----KETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        68 ~vih~a~~~~~~------~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~  137 (334)
                      +|||+||.....      .++....+++|+.++.++++.+    ++. +.+++|++||...+.+..              
T Consensus        84 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~--------------  148 (280)
T PRK06914         84 LLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQ-KSGKIINISSISGRVGFP--------------  148 (280)
T ss_pred             EEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEECcccccCCCC--------------
Confidence            999999874321      1233456789999998888886    443 467999999964432211              


Q ss_pred             ccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCc----------hhHHHHHHHHHHcCCCCccccCCC
Q 019878          138 FCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTT----------GNLVAKLMIERFNGRLPGYIGYGN  203 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~  203 (334)
                      +.+.|+.+|...+.+.+.+.    ++|++++++||+.++++.....          .......+.... +..      ..
T Consensus       149 ~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------~~  221 (280)
T PRK06914        149 GLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQ-KHI------NS  221 (280)
T ss_pred             CCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHH-HHH------hh
Confidence            13679999999998887764    4699999999999988732100          000111111111 000      01


Q ss_pred             CceeeeeHHHHHHHHHHHhhcCCCCCeEEec-CCCCCH
Q 019878          204 DRFSFCHVDDVVDGHIAAMEKGRSGERYLLT-GENASF  240 (334)
Q Consensus       204 ~~~~~i~v~D~a~a~~~~~~~~~~g~~~~i~-g~~~s~  240 (334)
                      ..+.+++++|+|+++..+++++..+..|+++ +..+++
T Consensus       222 ~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (280)
T PRK06914        222 GSDTFGNPIDVANLIVEIAESKRPKLRYPIGKGVKLMI  259 (280)
T ss_pred             hhhccCCHHHHHHHHHHHHcCCCCCcccccCCchHHHH
Confidence            2245788999999999999987766678886 454433

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.6e-21  Score=167.12  Aligned_cols=210  Identities=20%  Similarity=0.178  Sum_probs=151.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----C-CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      +++|||||+|+||.++++.|+++|++|++++|+......+    . ...++.++.+|++|.+++.++++       ++|+
T Consensus         7 k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   86 (250)
T PRK07774          7 KVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGIDY   86 (250)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            3699999999999999999999999999999986532211    1 11257789999999988776654       4899


Q ss_pred             EEEeccccCC---------CCCCcccchhhhhHHHHHHHHHHHhcC---CCcEEEEecccceeccCCCccCCCCCccccc
Q 019878           69 IFHTAALVEP---------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (334)
Q Consensus        69 vih~a~~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~  136 (334)
                      |||+||....         ...++...+++|+.++.++++++.+..   +.+++|++||...|..               
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~---------------  151 (250)
T PRK07774         87 LVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLY---------------  151 (250)
T ss_pred             EEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCC---------------
Confidence            9999997431         112234578899999999999988651   3469999999877642               


Q ss_pred             cccChHHHHHHHHHHHHHHHhh----cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHH
Q 019878          137 YFCTQYERSKAVADKIALQAAS----EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVD  212 (334)
Q Consensus       137 ~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  212 (334)
                        .+.|+.+|++.|.+.+.+.+    .|+++++++|+.+..+......  ...+......+.+.         .-+.+++
T Consensus       152 --~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~--~~~~~~~~~~~~~~---------~~~~~~~  218 (250)
T PRK07774        152 --SNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVT--PKEFVADMVKGIPL---------SRMGTPE  218 (250)
T ss_pred             --ccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccC--CHHHHHHHHhcCCC---------CCCcCHH
Confidence              25699999999999888753    3799999999999877532111  11122222222211         1245689


Q ss_pred             HHHHHHHHHhhcC---CCCCeEEec-CCCC
Q 019878          213 DVVDGHIAAMEKG---RSGERYLLT-GENA  238 (334)
Q Consensus       213 D~a~a~~~~~~~~---~~g~~~~i~-g~~~  238 (334)
                      |+++++..++...   ..|++|++. |+.+
T Consensus       219 d~a~~~~~~~~~~~~~~~g~~~~v~~g~~~  248 (250)
T PRK07774        219 DLVGMCLFLLSDEASWITGQIFNVDGGQII  248 (250)
T ss_pred             HHHHHHHHHhChhhhCcCCCEEEECCCeec
Confidence            9999999988764   368899996 4443

>PRK06194 hypothetical protein; Provisional

Probab=99.87  E-value=6.1e-21  Score=166.99  Aligned_cols=213  Identities=13%  Similarity=0.056  Sum_probs=153.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CC-CCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||+|+||++++++|+++|++|++++|+.+.....    .. ..++.++.+|++|.+++.++++       ++|+|
T Consensus         8 ~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~v   87 (287)
T PRK06194          8 VAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVHLL   87 (287)
T ss_pred             EEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            599999999999999999999999999999975432211    11 1257889999999999888775       47999


Q ss_pred             EEeccccCC------CCCCcccchhhhhHHHHHHHHHH----HhcCC-----CcEEEEecccceeccCCCccCCCCCccc
Q 019878           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAA----KETKT-----VEKIIYTSSFFALGSTDGYIADENQVHE  134 (334)
Q Consensus        70 ih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-----~~~~v~~Ss~~v~~~~~~~~~~e~~~~~  134 (334)
                      ||+||....      ..+++...+++|+.++.++++++    .+...     ..++|++||...+.+...          
T Consensus        88 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~----------  157 (287)
T PRK06194         88 FNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPA----------  157 (287)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCC----------
Confidence            999998432      11234456889999999987774    33311     158999999877754321          


Q ss_pred             cccccChHHHHHHHHHHHHHHHhh-c-----CCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceee
Q 019878          135 EKYFCTQYERSKAVADKIALQAAS-E-----GLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSF  208 (334)
Q Consensus       135 ~~~~~~~Y~~sK~~~E~~~~~~~~-~-----g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (334)
                          .+.|+.+|++.+.+.+.+.. .     ++++..+.|+.+..+-            .....+.+..+.+++.+.++|
T Consensus       158 ----~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~------------~~~~~~~~~~~~~~~~~~~~~  221 (287)
T PRK06194        158 ----MGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGI------------WQSERNRPADLANTAPPTRSQ  221 (287)
T ss_pred             ----CcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcc------------ccccccCchhcccCccccchh
Confidence                26699999999998887653 2     3556666666554331            122234455667778899999


Q ss_pred             eeHHHHHHHHHHHhhcCCCCCeEEecCCCCCHHHHHHHHHHHhCCC
Q 019878          209 CHVDDVVDGHIAAMEKGRSGERYLLTGENASFMQIFDMAAVITGTS  254 (334)
Q Consensus       209 i~v~D~a~a~~~~~~~~~~g~~~~i~g~~~s~~e~~~~i~~~~g~~  254 (334)
                      ++++|.+.++....              .++..|+++.+.+.+...
T Consensus       222 ~~~~~~~~~~~~~~--------------~~s~~dva~~i~~~~~~~  253 (287)
T PRK06194        222 LIAQAMSQKAVGSG--------------KVTAEEVAQLVFDAIRAG  253 (287)
T ss_pred             hHHHHHHHhhhhcc--------------CCCHHHHHHHHHHHHHcC
Confidence            99999988764321              178999999999877543

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.87  E-value=1.3e-21  Score=168.75  Aligned_cols=217  Identities=18%  Similarity=0.182  Sum_probs=150.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC----C---CCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S---EGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~---~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      +||||||+|+||+++++.|+++|++|++++|+......+.    .   ...+.++.+|++|.+++..+++       ++|
T Consensus         4 ~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id   83 (259)
T PRK12384          4 VAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRVD   83 (259)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            5999999999999999999999999999999865332211    0   1258899999999988776654       479


Q ss_pred             EEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CC-CcEEEEecccc-eeccCCCccCCCCCccccc
Q 019878           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KT-VEKIIYTSSFF-ALGSTDGYIADENQVHEEK  136 (334)
Q Consensus        68 ~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~~v~~Ss~~-v~~~~~~~~~~e~~~~~~~  136 (334)
                      +|||+||....      ...++...+++|+.++..+++++.+.   .+ -.++|++||.. .++..              
T Consensus        84 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~--------------  149 (259)
T PRK12384         84 LLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSK--------------  149 (259)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCC--------------
Confidence            99999986432      11234557799999988877777653   13 35899999864 23321              


Q ss_pred             cccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHH--cCCCCccccCCCCceeeee
Q 019878          137 YFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERF--NGRLPGYIGYGNDRFSFCH  210 (334)
Q Consensus       137 ~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~  210 (334)
                       ..+.|+.+|++.+.+.+.+.    ++|+++.++||+.++++...  .+.++.......  .+.....+..+...+.+++
T Consensus       150 -~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (259)
T PRK12384        150 -HNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMF--QSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCD  226 (259)
T ss_pred             -CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhh--hhhhHHHHHhcCCChHHHHHHHHHhCcccCCCC
Confidence             13679999999887777654    56999999999999876431  122222221100  0000111223345567899


Q ss_pred             HHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          211 VDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       211 v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      ++|+++++..++.+.   ..|.+|+++|
T Consensus       227 ~~dv~~~~~~l~~~~~~~~~G~~~~v~~  254 (259)
T PRK12384        227 YQDVLNMLLFYASPKASYCTGQSINVTG  254 (259)
T ss_pred             HHHHHHHHHHHcCcccccccCceEEEcC
Confidence            999999999887654   2588999964

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.1e-21  Score=168.73  Aligned_cols=210  Identities=17%  Similarity=0.145  Sum_probs=148.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEE-EcCCCCCC----CCCC-CCCeEEEEcCCCChhhHHHHhc-----------
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRAL-VRRTSDIS----GLPS-EGALELVYGDVTDYRSLVDACF-----------   64 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~----~~~~-~~~v~~~~~Dl~d~~~~~~~~~-----------   64 (334)
                      +|+||||+|+||++++++|+++|++|+++ .|+..+..    .+.. ...++++.+|++|.+++.++++           
T Consensus         8 ~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~~   87 (254)
T PRK12746          8 VALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIRVG   87 (254)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhccccC
Confidence            69999999999999999999999999775 56543221    1111 1257889999999998877665           


Q ss_pred             --CCCEEEEeccccCCC--CC----CcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCcccc
Q 019878           65 --GCHVIFHTAALVEPW--LP----DPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEE  135 (334)
Q Consensus        65 --~~d~vih~a~~~~~~--~~----~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~  135 (334)
                        ++|+|||+||.....  ..    .....++.|+.++.++++.+.+.. ..+++|++||..++.+...           
T Consensus        88 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~~-----------  156 (254)
T PRK12746         88 TSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTG-----------  156 (254)
T ss_pred             CCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCCC-----------
Confidence              489999999974321  11    124567799999999999998741 2358999999887753321           


Q ss_pred             ccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeH
Q 019878          136 KYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHV  211 (334)
Q Consensus       136 ~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  211 (334)
                         .+.|+.+|.+.|.+.+.+.    ++++++++++|+.++++.......  ...+.......        .....++++
T Consensus       157 ---~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~--~~~~~~~~~~~--------~~~~~~~~~  223 (254)
T PRK12746        157 ---SIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLD--DPEIRNFATNS--------SVFGRIGQV  223 (254)
T ss_pred             ---CcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhcc--ChhHHHHHHhc--------CCcCCCCCH
Confidence               3669999999998877654    358999999999998874211000  01111111111        122357789


Q ss_pred             HHHHHHHHHHhhcCC---CCCeEEecC
Q 019878          212 DDVVDGHIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       212 ~D~a~a~~~~~~~~~---~g~~~~i~g  235 (334)
                      +|+++++..++..+.   .|++|++.+
T Consensus       224 ~dva~~~~~l~~~~~~~~~g~~~~i~~  250 (254)
T PRK12746        224 EDIADAVAFLASSDSRWVTGQIIDVSG  250 (254)
T ss_pred             HHHHHHHHHHcCcccCCcCCCEEEeCC
Confidence            999999998887642   588999964

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.87  E-value=3.3e-21  Score=164.66  Aligned_cols=209  Identities=20%  Similarity=0.188  Sum_probs=150.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----C-CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      |+||||||+|+||+++++.|+++|++|++++|++.+...+    . ...++.++.+|+.|.+++.++++       .+|+
T Consensus         6 ~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   85 (246)
T PRK05653          6 KTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALDI   85 (246)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            3699999999999999999999999999999987543211    1 11258889999999988877665       3699


Q ss_pred             EEEeccccCCC------CCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           69 IFHTAALVEPW------LPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        69 vih~a~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      |||+||.....      .++....++.|+.+..++++.+.+.   .+.+++|++||........              +.
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~--------------~~  151 (246)
T PRK05653         86 LVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNP--------------GQ  151 (246)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCC--------------CC
Confidence            99999874331      1123456889999999999888532   2568999999975432111              13


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      +.|+.+|.+.+.+.+.+.    +.+++++++||+.++|+....    +............        ..+.+++++|++
T Consensus       152 ~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~----~~~~~~~~~~~~~--------~~~~~~~~~dva  219 (246)
T PRK05653        152 TNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEG----LPEEVKAEILKEI--------PLGRLGQPEEVA  219 (246)
T ss_pred             cHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhh----hhHHHHHHHHhcC--------CCCCCcCHHHHH
Confidence            669999998888877754    348999999999999986421    1111211111111        125688999999


Q ss_pred             HHHHHHhhcC---CCCCeEEecC
Q 019878          216 DGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       216 ~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +++..++...   ..|++|+++|
T Consensus       220 ~~~~~~~~~~~~~~~g~~~~~~g  242 (246)
T PRK05653        220 NAVAFLASDAASYITGQVIPVNG  242 (246)
T ss_pred             HHHHHHcCchhcCccCCEEEeCC
Confidence            9999998653   2588999965

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.87  E-value=6.9e-21  Score=164.22  Aligned_cols=209  Identities=15%  Similarity=0.145  Sum_probs=144.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC---CCCC-CCCeEEEEcCCCChhhHHHHhc-------CCCEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS---GLPS-EGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vi   70 (334)
                      ++|||||+|+||+++++.|+++|++|++++|++....   .+.. ..++.++.+|++|.+++.++++       ++|++|
T Consensus        10 ~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv   89 (260)
T PRK12823         10 VVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRIDVLI   89 (260)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCeEEE
Confidence            5999999999999999999999999999999742110   1111 1257789999999887766654       489999


Q ss_pred             EeccccC---C----CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           71 HTAALVE---P----WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        71 h~a~~~~---~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      |+||...   +    ...+....+++|+.++..+++.+.+.   .+..++|++||...++..                ..
T Consensus        90 ~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~----------------~~  153 (260)
T PRK12823         90 NNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGIN----------------RV  153 (260)
T ss_pred             ECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCCC----------------CC
Confidence            9998521   1    11234456788998887666555532   145699999998766421                14


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCC----------chhHHHHHHHHHHcCCCCccccCCCCce
Q 019878          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLT----------TGNLVAKLMIERFNGRLPGYIGYGNDRF  206 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (334)
                      +|+.+|.+.+.+.+.+.    ++|+++.+++|+.++++....          .......+......+.+.         .
T Consensus       154 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~  224 (260)
T PRK12823        154 PYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLM---------K  224 (260)
T ss_pred             ccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCc---------c
Confidence            69999999999888764    348999999999999973100          001122222222222221         1


Q ss_pred             eeeeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          207 SFCHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       207 ~~i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      -+.+++|+++++..++...   ..|.++++.|
T Consensus       225 ~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~g  256 (260)
T PRK12823        225 RYGTIDEQVAAILFLASDEASYITGTVLPVGG  256 (260)
T ss_pred             cCCCHHHHHHHHHHHcCcccccccCcEEeecC
Confidence            2457999999999988654   2588999864

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.87  E-value=6.7e-21  Score=163.05  Aligned_cols=209  Identities=17%  Similarity=0.177  Sum_probs=148.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCC-CCCCC----CCC-CCCeEEEEcCCCChhhHHHHhcC-------CCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISG----LPS-EGALELVYGDVTDYRSLVDACFG-------CHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~----~~~-~~~v~~~~~Dl~d~~~~~~~~~~-------~d~   68 (334)
                      ++|||||+|+||++++++|+++|++|+++.++. +....    +.. ..++.++.+|+.|.+++.+++++       +|+
T Consensus         8 ~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   87 (247)
T PRK12935          8 VAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKVDI   87 (247)
T ss_pred             EEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            599999999999999999999999998765532 22111    111 12588999999999988877754       799


Q ss_pred             EEEeccccCCC------CCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           69 IFHTAALVEPW------LPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        69 vih~a~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      |||+||.....      .+.++..+++|+.++.++++++.+.   ...+++|++||...+....              +.
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------------~~  153 (247)
T PRK12935         88 LVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGF--------------GQ  153 (247)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCC--------------CC
Confidence            99999974321      1345567899999999999998753   1346899999965543221              13


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      +.|+.+|.+.+.+.+.+.    +.|+++++++|+.+.++....   ...........+         ...+.+++++|++
T Consensus       154 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~---~~~~~~~~~~~~---------~~~~~~~~~edva  221 (247)
T PRK12935        154 TNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAE---VPEEVRQKIVAK---------IPKKRFGQADEIA  221 (247)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhh---ccHHHHHHHHHh---------CCCCCCcCHHHHH
Confidence            679999998888776654    348999999999998753211   111111111111         1334689999999


Q ss_pred             HHHHHHhhcC--CCCCeEEecCC
Q 019878          216 DGHIAAMEKG--RSGERYLLTGE  236 (334)
Q Consensus       216 ~a~~~~~~~~--~~g~~~~i~g~  236 (334)
                      ++++.+++..  ..|+.||+.|.
T Consensus       222 ~~~~~~~~~~~~~~g~~~~i~~g  244 (247)
T PRK12935        222 KGVVYLCRDGAYITGQQLNINGG  244 (247)
T ss_pred             HHHHHHcCcccCccCCEEEeCCC
Confidence            9999998764  36899999754

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.86  E-value=3.4e-21  Score=162.70  Aligned_cols=201  Identities=18%  Similarity=0.181  Sum_probs=144.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-CCCCeEEEEcCCCChhhHHHHhc---CCCEEEEecccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-SEGALELVYGDVTDYRSLVDACF---GCHVIFHTAALV   76 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~---~~d~vih~a~~~   76 (334)
                      |++|||||+|+||+++++.|+++ ++|++++|+.++...+. ..++++++.+|+.|.+.+.++++   ++|+|||+||..
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~   82 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGVA   82 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCcC
Confidence            36999999999999999999999 99999999865432221 11257899999999999988886   589999999974


Q ss_pred             CCC------CCCcccchhhhhHHH----HHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHH
Q 019878           77 EPW------LPDPSRFFAVNVEGL----KNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (334)
Q Consensus        77 ~~~------~~~~~~~~~~n~~~~----~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK  146 (334)
                      ...      ..+....+++|+.+.    +++++.+++.  .+++|++||...++....              ...|+.+|
T Consensus        83 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~v~~ss~~~~~~~~~--------------~~~y~~~K  146 (227)
T PRK08219         83 DLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA--HGHVVFINSGAGLRANPG--------------WGSYAASK  146 (227)
T ss_pred             CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCeEEEEcchHhcCcCCC--------------CchHHHHH
Confidence            321      112334578888884    4444444444  468999999877654321              25699999


Q ss_pred             HHHHHHHHHHhh--cC-CCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhh
Q 019878          147 AVADKIALQAAS--EG-LPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAME  223 (334)
Q Consensus       147 ~~~E~~~~~~~~--~g-~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~  223 (334)
                      ...+.+.+.+..  .+ +++..++|+.+.++...       .+...  .+.       ....+.+++++|+++++..+++
T Consensus       147 ~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~-------~~~~~--~~~-------~~~~~~~~~~~dva~~~~~~l~  210 (227)
T PRK08219        147 FALRALADALREEEPGNVRVTSVHPGRTDTDMQR-------GLVAQ--EGG-------EYDPERYLRPETVAKAVRFAVD  210 (227)
T ss_pred             HHHHHHHHHHHHHhcCCceEEEEecCCccchHhh-------hhhhh--hcc-------ccCCCCCCCHHHHHHHHHHHHc
Confidence            999988887653  24 88999998877654211       11100  011       1123468999999999999999


Q ss_pred             cCCCCCeEEec
Q 019878          224 KGRSGERYLLT  234 (334)
Q Consensus       224 ~~~~g~~~~i~  234 (334)
                      ++..+.++++.
T Consensus       211 ~~~~~~~~~~~  221 (227)
T PRK08219        211 APPDAHITEVV  221 (227)
T ss_pred             CCCCCccceEE
Confidence            87778888885

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2e-21  Score=166.01  Aligned_cols=210  Identities=24%  Similarity=0.206  Sum_probs=151.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc---CCCEEEEeccccCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF---GCHVIFHTAALVEP   78 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---~~d~vih~a~~~~~   78 (334)
                      +++||||+|+||+++++.|+++|++|++++|+.++...+....+..++.+|++|.+.+.++++   ++|+|||+||....
T Consensus        11 ~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag~~~~   90 (245)
T PRK07060         11 SVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAGIASL   90 (245)
T ss_pred             EEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence            699999999999999999999999999999987544332222246788999999988888775   48999999997432


Q ss_pred             ------CCCCcccchhhhhHHHHHHHHHHHhcC----CCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHH
Q 019878           79 ------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAV  148 (334)
Q Consensus        79 ------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~  148 (334)
                            ...+++..+..|+.++.++++++.+..    ..+++|++||...+.+...              ...|+.+|.+
T Consensus        91 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~~~y~~sK~a  156 (245)
T PRK07060         91 ESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPD--------------HLAYCASKAA  156 (245)
T ss_pred             CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCC--------------CcHhHHHHHH
Confidence                  112345567899999999999887641    1368999999876654321              2669999999


Q ss_pred             HHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhc
Q 019878          149 ADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEK  224 (334)
Q Consensus       149 ~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~  224 (334)
                      .|.+++.+.    +.|++++.+||+.++++........ ........ ..        .....|++++|+++++..++..
T Consensus       157 ~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~-~~~~~~~~-~~--------~~~~~~~~~~d~a~~~~~l~~~  226 (245)
T PRK07060        157 LDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSD-PQKSGPML-AA--------IPLGRFAEVDDVAAPILFLLSD  226 (245)
T ss_pred             HHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccC-HHHHHHHH-hc--------CCCCCCCCHHHHHHHHHHHcCc
Confidence            999888765    3489999999999998753210000 00001111 11        1124589999999999999976


Q ss_pred             CC---CCCeEEecC
Q 019878          225 GR---SGERYLLTG  235 (334)
Q Consensus       225 ~~---~g~~~~i~g  235 (334)
                      +.   .|+++++.|
T Consensus       227 ~~~~~~G~~~~~~~  240 (245)
T PRK07060        227 AASMVSGVSLPVDG  240 (245)
T ss_pred             ccCCccCcEEeECC
Confidence            42   588888864

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2.1e-21  Score=167.74  Aligned_cols=217  Identities=18%  Similarity=0.195  Sum_probs=148.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC---CCCeEEEEcCCCChhhHHHHhc-------CCCEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS---EGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vi   70 (334)
                      +++|||||+|+||+++++.|+++|++|++++|+++....+..   ..++.++.+|+.|.+.+.++++       ++|+||
T Consensus        12 ~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   91 (264)
T PRK12829         12 LRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLDVLV   91 (264)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            479999999999999999999999999999997653322111   0146889999999998877664       589999


Q ss_pred             EeccccCC-------CCCCcccchhhhhHHHHHHHHHHHhc---CCC-cEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           71 HTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKET---KTV-EKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        71 h~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~-~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      |+||....       ..+++...++.|+.++.++++++.+.   .+. ++++++||.......+.              .
T Consensus        92 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~--------------~  157 (264)
T PRK12829         92 NNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPG--------------R  157 (264)
T ss_pred             ECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCC--------------C
Confidence            99997522       11234567899999999999987432   233 57888887543322111              2


Q ss_pred             ChHHHHHHHHHHHHHHHhh----cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccc---cCCCCceeeeeHH
Q 019878          140 TQYERSKAVADKIALQAAS----EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYI---GYGNDRFSFCHVD  212 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~~----~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~v~  212 (334)
                      +.|+.+|.+.|.+++.+.+    .+++++++||+.++|+...   ..+...... .........   ........+++++
T Consensus       158 ~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  233 (264)
T PRK12829        158 TPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMR---RVIEARAQQ-LGIGLDEMEQEYLEKISLGRMVEPE  233 (264)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHH---HHhhhhhhc-cCCChhHHHHHHHhcCCCCCCCCHH
Confidence            5699999999998887653    4899999999999998531   111110000 000000000   0001123589999


Q ss_pred             HHHHHHHHHhhcC---CCCCeEEecC
Q 019878          213 DVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       213 D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      |+++++..++...   ..|+.|+++|
T Consensus       234 d~a~~~~~l~~~~~~~~~g~~~~i~~  259 (264)
T PRK12829        234 DIAATALFLASPAARYITGQAISVDG  259 (264)
T ss_pred             HHHHHHHHHcCccccCccCcEEEeCC
Confidence            9999998887642   3588999964

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=6.3e-21  Score=163.54  Aligned_cols=212  Identities=18%  Similarity=0.142  Sum_probs=150.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CCCCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PSEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      +++|||||+|+||.++++.|+++|++|++++|++.+...+    ....++.++.+|+.|.+++..+++       .+|+|
T Consensus         6 ~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   85 (251)
T PRK07231          6 KVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVDIL   85 (251)
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            3699999999999999999999999999999987543221    111257899999999999887764       47999


Q ss_pred             EEeccccCC-------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           70 FHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        70 ih~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      ||+||....       ..++++..+++|+.++.++++.+.+.   .+.++||++||...+++...              .
T Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~  151 (251)
T PRK07231         86 VNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPG--------------L  151 (251)
T ss_pred             EECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCC--------------c
Confidence            999986321       11234567889999988888777653   25679999999877764332              3


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchh-HHHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGN-LVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      +.|+.+|...+.+.+.+.    ..+++++.++|+.+.++....... ...........+         .....+++++|+
T Consensus       152 ~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dv  222 (251)
T PRK07231        152 GWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLAT---------IPLGRLGTPEDI  222 (251)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcC---------CCCCCCcCHHHH
Confidence            669999999888777654    348999999999997654211000 000111111111         122357899999


Q ss_pred             HHHHHHHhhcCC---CCCeEEecC
Q 019878          215 VDGHIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       215 a~a~~~~~~~~~---~g~~~~i~g  235 (334)
                      |++++.++....   .|..+.+.|
T Consensus       223 a~~~~~l~~~~~~~~~g~~~~~~g  246 (251)
T PRK07231        223 ANAALFLASDEASWITGVTLVVDG  246 (251)
T ss_pred             HHHHHHHhCccccCCCCCeEEECC
Confidence            999999997542   477777754

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=1.8e-20  Score=160.80  Aligned_cols=212  Identities=13%  Similarity=0.073  Sum_probs=147.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC-CC----CCCC-CCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-IS----GLPS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~----~~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      +||||||+|+||++++++|+++|++|++..|+... ..    .+.. ..++.++.+|+++.+++..+++       .+|+
T Consensus         8 ~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   87 (252)
T PRK06077          8 VVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVADI   87 (252)
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999999999999999999999999887765321 10    0010 0246788999999988777654       4799


Q ss_pred             EEEeccccCCC---CC---CcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCccccccccCh
Q 019878           69 IFHTAALVEPW---LP---DPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (334)
Q Consensus        69 vih~a~~~~~~---~~---~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  141 (334)
                      |||+||.....   ..   ..+..+++|+.+..++++++.+.. ..++||++||...+.+..              +.+.
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------------~~~~  153 (252)
T PRK06077         88 LVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAY--------------GLSI  153 (252)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCC--------------CchH
Confidence            99999973221   11   124568999999999999988651 124899999988775332              1367


Q ss_pred             HHHHHHHHHHHHHHHhhc---CCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHH
Q 019878          142 YERSKAVADKIALQAASE---GLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGH  218 (334)
Q Consensus       142 Y~~sK~~~E~~~~~~~~~---g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  218 (334)
                      |+.+|...|.+.+.+.++   ++.+.+++|+.+.++..................        .......+++++|+++++
T Consensus       154 Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~dva~~~  225 (252)
T PRK06077        154 YGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAE--------KFTLMGKILDPEEVAEFV  225 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHH--------hcCcCCCCCCHHHHHHHH
Confidence            999999999999887642   789999999999876321100000000000000        011223689999999999


Q ss_pred             HHHhhcCC-CCCeEEecC
Q 019878          219 IAAMEKGR-SGERYLLTG  235 (334)
Q Consensus       219 ~~~~~~~~-~g~~~~i~g  235 (334)
                      ..++..+. .|++|++++
T Consensus       226 ~~~~~~~~~~g~~~~i~~  243 (252)
T PRK06077        226 AAILKIESITGQVFVLDS  243 (252)
T ss_pred             HHHhCccccCCCeEEecC
Confidence            99997554 588999964

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.86  E-value=4.9e-21  Score=164.70  Aligned_cols=210  Identities=19%  Similarity=0.190  Sum_probs=150.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CCC-CCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPS-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||+|+||++++++|+++|++|++++|++++...    +.. ..++.++.+|+.|.+++.++++       .+|+|
T Consensus        12 ~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~l   91 (255)
T PRK07523         12 RALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPIDIL   91 (255)
T ss_pred             EEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            69999999999999999999999999999998653221    111 1247889999999998887765       38999


Q ss_pred             EEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        70 ih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      ||+||....      ..++.+..++.|+.++.++++++.+.   .+.+++|++||........              ..+
T Consensus        92 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~--------------~~~  157 (255)
T PRK07523         92 VNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARP--------------GIA  157 (255)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCC--------------CCc
Confidence            999997432      11223557789999999999999764   2456999999975443221              136


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHH
Q 019878          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVD  216 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  216 (334)
                      .|+.+|.+.+.+.+.+.    ++|+++.++||+.+.++.......  ...+........+        ...+..++|+|+
T Consensus       158 ~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~--~~~~~~~~~~~~~--------~~~~~~~~dva~  227 (255)
T PRK07523        158 PYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVA--DPEFSAWLEKRTP--------AGRWGKVEELVG  227 (255)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhcc--CHHHHHHHHhcCC--------CCCCcCHHHHHH
Confidence            79999999998887754    468999999999999875321100  0111111111111        234678999999


Q ss_pred             HHHHHhhcCC---CCCeEEecC
Q 019878          217 GHIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       217 a~~~~~~~~~---~g~~~~i~g  235 (334)
                      ++..++....   .|.++++.|
T Consensus       228 ~~~~l~~~~~~~~~G~~i~~~g  249 (255)
T PRK07523        228 ACVFLASDASSFVNGHVLYVDG  249 (255)
T ss_pred             HHHHHcCchhcCccCcEEEECC
Confidence            9999987532   588888864

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2.4e-20  Score=159.73  Aligned_cols=206  Identities=21%  Similarity=0.226  Sum_probs=148.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC--------CCC-CCCeEEEEcCCCChhhHHHHhc-------
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG--------LPS-EGALELVYGDVTDYRSLVDACF-------   64 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------~~~-~~~v~~~~~Dl~d~~~~~~~~~-------   64 (334)
                      |++|||||+|+||+++++.|+++|++|++++|.......        +.. ...+.++.+|+.|.+.+.++++       
T Consensus         7 ~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (249)
T PRK12827          7 RRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEFG   86 (249)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            579999999999999999999999999998774322110        000 1257899999999998877763       


Q ss_pred             CCCEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHH-----hcCCCcEEEEecccceeccCCCccCCCCCcc
Q 019878           65 GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAK-----ETKTVEKIIYTSSFFALGSTDGYIADENQVH  133 (334)
Q Consensus        65 ~~d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~-----~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~  133 (334)
                      ++|+|||+||....      ..+++...+++|+.++.++++++.     +. ..+++|++||...+.....         
T Consensus        87 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~~---------  156 (249)
T PRK12827         87 RLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRAR-RGGRIVNIASVAGVRGNRG---------  156 (249)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-CCeEEEEECCchhcCCCCC---------
Confidence            48999999997442      112345678999999999999998     33 4679999999877643221         


Q ss_pred             ccccccChHHHHHHHHHHHHHHHhh----cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeee
Q 019878          134 EEKYFCTQYERSKAVADKIALQAAS----EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFC  209 (334)
Q Consensus       134 ~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  209 (334)
                           ...|+.+|.+.+.+.+.+..    .|++++++||+.+.++.....  .....+   ....+         ...+.
T Consensus       157 -----~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~--~~~~~~---~~~~~---------~~~~~  217 (249)
T PRK12827        157 -----QVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNA--APTEHL---LNPVP---------VQRLG  217 (249)
T ss_pred             -----CchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCccccc--chHHHH---HhhCC---------CcCCc
Confidence                 25699999998888877642    489999999999999854221  111111   11111         11245


Q ss_pred             eHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          210 HVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       210 ~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +++|+++++..++...   ..|+++++.|
T Consensus       218 ~~~~va~~~~~l~~~~~~~~~g~~~~~~~  246 (249)
T PRK12827        218 EPDEVAALVAFLVSDAASYVTGQVIPVDG  246 (249)
T ss_pred             CHHHHHHHHHHHcCcccCCccCcEEEeCC
Confidence            7899999999888653   2478888854

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.7e-20  Score=162.69  Aligned_cols=209  Identities=20%  Similarity=0.143  Sum_probs=147.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~a~   74 (334)
                      +|+||||+|+||+++++.|+++|++|++++|+.......   .+++++.+|++|.+++.++++       .+|+|||+||
T Consensus         6 ~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag   82 (270)
T PRK06179          6 VALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI---PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAG   82 (270)
T ss_pred             EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc---CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence            499999999999999999999999999999987654322   368999999999999888775       3799999999


Q ss_pred             ccCC------CCCCcccchhhhhHHHHHHHHHHH----hcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHH
Q 019878           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAK----ETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (334)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (334)
                      ....      ..++....+++|+.++.++++.+.    +. +.+++|++||...+...+.              .+.|+.
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~--------------~~~Y~~  147 (270)
T PRK06179         83 VGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQ-GSGRIINISSVLGFLPAPY--------------MALYAA  147 (270)
T ss_pred             CCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEECCccccCCCCC--------------ccHHHH
Confidence            7432      112345688999999999998863    33 5679999999766543221              367999


Q ss_pred             HHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCch---hHHHH--HHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          145 SKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTG---NLVAK--LMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       145 sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      +|...+.+.+.+.    ++|+++++++|+.+.++......   ..+..  ........    ...  .........+|++
T Consensus       148 sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~~va  221 (270)
T PRK06179        148 SKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSK----AVA--KAVKKADAPEVVA  221 (270)
T ss_pred             HHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHH----HHH--hccccCCCHHHHH
Confidence            9999998877754    45999999999999886432110   00000  00000000    000  0111235689999


Q ss_pred             HHHHHHhhcCCCCCeEEec
Q 019878          216 DGHIAAMEKGRSGERYLLT  234 (334)
Q Consensus       216 ~a~~~~~~~~~~g~~~~i~  234 (334)
                      +++..++..+..+..|..+
T Consensus       222 ~~~~~~~~~~~~~~~~~~~  240 (270)
T PRK06179        222 DTVVKAALGPWPKMRYTAG  240 (270)
T ss_pred             HHHHHHHcCCCCCeeEecC
Confidence            9999999876666666553

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.85  E-value=1.3e-20  Score=161.59  Aligned_cols=212  Identities=19%  Similarity=0.186  Sum_probs=149.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CC-CCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      +++|||||+|+||+++++.|+++|++|++++|+.+....+    .. ..++.++.+|+.|.+++.++++       ++|+
T Consensus         4 ~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d~   83 (250)
T TIGR03206         4 KTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVDV   83 (250)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3699999999999999999999999999999986543211    10 1268899999999988877764       4899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      |||+|+....      ...+....+++|+.++.++++++.+.   .+.+++|++||...+.....              .
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~--------------~  149 (250)
T TIGR03206        84 LVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSG--------------E  149 (250)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCC--------------C
Confidence            9999986321      11223456899999999998888632   14579999999887764432              2


Q ss_pred             ChHHHHHHHHHHHHHHHhh----cCCCEEEEecCceecCCCCCchh---HHHHHHHHHHcCCCCccccCCCCceeeeeHH
Q 019878          140 TQYERSKAVADKIALQAAS----EGLPIVPVYPGVIYGPGKLTTGN---LVAKLMIERFNGRLPGYIGYGNDRFSFCHVD  212 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~~----~g~~~~ilR~~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  212 (334)
                      ..|+.+|.+.+.+.+.+..    .+++++++||+.++++.......   .......... ...+        ...+...+
T Consensus       150 ~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------~~~~~~~~  220 (250)
T TIGR03206       150 AVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFT-RAIP--------LGRLGQPD  220 (250)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHH-hcCC--------ccCCcCHH
Confidence            5699999988888777653    48999999999999873210000   0001111111 1111        11245689


Q ss_pred             HHHHHHHHHhhcCC---CCCeEEecC
Q 019878          213 DVVDGHIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       213 D~a~a~~~~~~~~~---~g~~~~i~g  235 (334)
                      |+|+++..++....   .|+++++.|
T Consensus       221 dva~~~~~l~~~~~~~~~g~~~~~~~  246 (250)
T TIGR03206       221 DLPGAILFFSSDDASFITGQVLSVSG  246 (250)
T ss_pred             HHHHHHHHHcCcccCCCcCcEEEeCC
Confidence            99999999887543   588998864

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.85  E-value=6.7e-21  Score=163.48  Aligned_cols=211  Identities=19%  Similarity=0.199  Sum_probs=148.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vi   70 (334)
                      ++|||||+|+||++|++.|+++|++|++++|+.+....    +....++.++.+|++|.+++.++++       ++|+||
T Consensus         7 ~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~vi   86 (252)
T PRK06138          7 VAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLDVLV   86 (252)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            59999999999999999999999999999998653221    1111257899999999998877764       589999


Q ss_pred             EeccccCC------CCCCcccchhhhhHHHHHHHHHHH----hcCCCcEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAK----ETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        71 h~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      |+|+....      ..++....+++|+.++.++.+.+.    +. +.+++|++||.........              .+
T Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~sS~~~~~~~~~--------------~~  151 (252)
T PRK06138         87 NNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQ-GGGSIVNTASQLALAGGRG--------------RA  151 (252)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-CCeEEEEECChhhccCCCC--------------cc
Confidence            99997432      112234568899999987777664    33 4679999999765432211              26


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchh--HHHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGN--LVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      .|+.+|.+.+.+.+.+.    ..|++++++||+.++++.......  .....+.......        .....|++++|+
T Consensus       152 ~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~d~  223 (252)
T PRK06138        152 AYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRAR--------HPMNRFGTAEEV  223 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhc--------CCCCCCcCHHHH
Confidence            69999999998888764    348999999999999874211000  0001111111111        112247889999


Q ss_pred             HHHHHHHhhcCC---CCCeEEecC
Q 019878          215 VDGHIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       215 a~a~~~~~~~~~---~g~~~~i~g  235 (334)
                      ++++..++.++.   .|.++.+.+
T Consensus       224 a~~~~~l~~~~~~~~~g~~~~~~~  247 (252)
T PRK06138        224 AQAALFLASDESSFATGTTLVVDG  247 (252)
T ss_pred             HHHHHHHcCchhcCccCCEEEECC
Confidence            999999988753   477888754

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.7e-20  Score=159.63  Aligned_cols=199  Identities=21%  Similarity=0.238  Sum_probs=148.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC----CCCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS----GLPSEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vi   70 (334)
                      ++|||||+|+||+++++.|+++|++|++++|++.+..    .+.. ..++++.+|+.|.+++.++++       ++|+||
T Consensus         9 ~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   87 (239)
T PRK12828          9 VVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPA-DALRIGGIDLVDPQAARRAVDEVNRQFGRLDALV   87 (239)
T ss_pred             EEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhh-cCceEEEeecCCHHHHHHHHHHHHHHhCCcCEEE
Confidence            6999999999999999999999999999999765421    1211 257888999999988877665       589999


Q ss_pred             EeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccCh
Q 019878           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (334)
Q Consensus        71 h~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  141 (334)
                      |+|+....      ..++....+..|+.++.++++++.+.   .+.+++|++||...++....              ...
T Consensus        88 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~~~  153 (239)
T PRK12828         88 NIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPG--------------MGA  153 (239)
T ss_pred             ECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCC--------------cch
Confidence            99986321      11123456789999999999888532   25789999999987764321              356


Q ss_pred             HHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHH
Q 019878          142 YERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDG  217 (334)
Q Consensus       142 Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  217 (334)
                      |+.+|.+.+.+++.+.    +.++++.++||+.++++....               ..+     ......|++++|++++
T Consensus       154 y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~---------------~~~-----~~~~~~~~~~~dva~~  213 (239)
T PRK12828        154 YAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRA---------------DMP-----DADFSRWVTPEQIAAV  213 (239)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhh---------------cCC-----chhhhcCCCHHHHHHH
Confidence            9999998888887654    358999999999999873210               000     0112348999999999


Q ss_pred             HHHHhhcCC---CCCeEEecC
Q 019878          218 HIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       218 ~~~~~~~~~---~g~~~~i~g  235 (334)
                      +..++....   .|+.+++.|
T Consensus       214 ~~~~l~~~~~~~~g~~~~~~g  234 (239)
T PRK12828        214 IAFLLSDEAQAITGASIPVDG  234 (239)
T ss_pred             HHHHhCcccccccceEEEecC
Confidence            999997642   478888865

>PRK09186 flagellin modification protein A; Provisional

Probab=99.85  E-value=2.7e-20  Score=160.15  Aligned_cols=215  Identities=18%  Similarity=0.168  Sum_probs=145.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----C---CCCCeEEEEcCCCChhhHHHHhcC-------C
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P---SEGALELVYGDVTDYRSLVDACFG-------C   66 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~---~~~~v~~~~~Dl~d~~~~~~~~~~-------~   66 (334)
                      +++|||||+|+||.++++.|+++|++|++++|+++....+    .   ....+.++.+|+.|++++.+++++       +
T Consensus         5 k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~i   84 (256)
T PRK09186          5 KTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYGKI   84 (256)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCc
Confidence            4699999999999999999999999999999986543211    0   112466779999999998887753       7


Q ss_pred             CEEEEeccccCC---------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccc
Q 019878           67 HVIFHTAALVEP---------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHE  134 (334)
Q Consensus        67 d~vih~a~~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~  134 (334)
                      |+|||+|+....         ........+++|+.++..+++++.+.   .+.+++|++||...+........++.....
T Consensus        85 d~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~  164 (256)
T PRK09186         85 DGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMTS  164 (256)
T ss_pred             cEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhccccccCC
Confidence            999999975321         11123456778887777666665543   145799999997655432211112222111


Q ss_pred             cccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeee
Q 019878          135 EKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCH  210 (334)
Q Consensus       135 ~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  210 (334)
                          ...|+.+|...+.+.+.+.    .+|+++++++|+.++++..   ..    +.... ....        ....+++
T Consensus       165 ----~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~---~~----~~~~~-~~~~--------~~~~~~~  224 (256)
T PRK09186        165 ----PVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP---EA----FLNAY-KKCC--------NGKGMLD  224 (256)
T ss_pred             ----cchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC---HH----HHHHH-HhcC--------CccCCCC
Confidence                2469999999998887654    3589999999999886531   11    11111 1111        1124789


Q ss_pred             HHHHHHHHHHHhhcCC---CCCeEEecC
Q 019878          211 VDDVVDGHIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       211 v~D~a~a~~~~~~~~~---~g~~~~i~g  235 (334)
                      ++|+++++..++....   .|.++++.|
T Consensus       225 ~~dva~~~~~l~~~~~~~~~g~~~~~~~  252 (256)
T PRK09186        225 PDDICGTLVFLLSDQSKYITGQNIIVDD  252 (256)
T ss_pred             HHHhhhhHhheeccccccccCceEEecC
Confidence            9999999999997543   477777754

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.85  E-value=5.6e-19  Score=153.51  Aligned_cols=226  Identities=28%  Similarity=0.379  Sum_probs=173.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~   80 (334)
                      |+||||||||++|+++++.|+++|++|+++.|+++....+.  .+++++.+|+.+...+...+.+.|.++++.+... ..
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~--~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~-~~   77 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA--GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLD-GS   77 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc--CCcEEEEeccCCHhHHHHHhccccEEEEEecccc-cc
Confidence            89999999999999999999999999999999988776665  5899999999999999999999999999998643 21


Q ss_pred             CCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHhhcC
Q 019878           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEG  160 (334)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g  160 (334)
                      .   ...........+..+.+. . ++++++++|...+-...                ...|..+|..+|..+..   .|
T Consensus        78 ~---~~~~~~~~~~~~~a~~a~-~-~~~~~~~~s~~~~~~~~----------------~~~~~~~~~~~e~~l~~---sg  133 (275)
T COG0702          78 D---AFRAVQVTAVVRAAEAAG-A-GVKHGVSLSVLGADAAS----------------PSALARAKAAVEAALRS---SG  133 (275)
T ss_pred             c---chhHHHHHHHHHHHHHhc-C-CceEEEEeccCCCCCCC----------------ccHHHHHHHHHHHHHHh---cC
Confidence            1   233444555555555555 2 47789999865433211                15699999999999998   89


Q ss_pred             CCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC-CCCeEEecC-CCC
Q 019878          161 LPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR-SGERYLLTG-ENA  238 (334)
Q Consensus       161 ~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-~g~~~~i~g-~~~  238 (334)
                      ++.+++|+..+|....    ..+   .........+. ...+....+++.++|+++++..++..+. .+.+|.++| +..
T Consensus       134 ~~~t~lr~~~~~~~~~----~~~---~~~~~~~~~~~-~~~~~~~~~~i~~~d~a~~~~~~l~~~~~~~~~~~l~g~~~~  205 (275)
T COG0702         134 IPYTTLRRAAFYLGAG----AAF---IEAAEAAGLPV-IPRGIGRLSPIAVDDVAEALAAALDAPATAGRTYELAGPEAL  205 (275)
T ss_pred             CCeEEEecCeeeeccc----hhH---HHHHHhhCCce-ecCCCCceeeeEHHHHHHHHHHHhcCCcccCcEEEccCCcee
Confidence            9999999777776432    111   22222333232 2223337899999999999999998774 688999987 579


Q ss_pred             CHHHHHHHHHHHhCCCCCccccc
Q 019878          239 SFMQIFDMAAVITGTSRPRFCIP  261 (334)
Q Consensus       239 s~~e~~~~i~~~~g~~~~~~~~~  261 (334)
                      +..+..+.+.+..|++......+
T Consensus       206 ~~~~~~~~l~~~~gr~~~~~~~~  228 (275)
T COG0702         206 TLAELASGLDYTIGRPVGLIPEA  228 (275)
T ss_pred             cHHHHHHHHHHHhCCcceeeCCc
Confidence            99999999999999987774444

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.2e-19  Score=153.94  Aligned_cols=205  Identities=21%  Similarity=0.212  Sum_probs=145.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc------CCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF------GCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------~~d~vih~a~   74 (334)
                      ++||||||+|+||.+++++|+++|++|++++|+....  .    ..+++.+|+.|.+++.++++      ++|+|||+||
T Consensus         4 k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~--~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag   77 (234)
T PRK07577          4 RTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD--F----PGELFACDLADIEQTAATLAQINEIHPVDAIVNNVG   77 (234)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc--c----CceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCC
Confidence            3699999999999999999999999999999987641  1    23678999999988877665      5899999999


Q ss_pred             ccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChHHHH
Q 019878           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (334)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (334)
                      ....      ..+++...++.|+.++.++.+++...   .+.+++|++||...|+...               .+.|+.+
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------------~~~Y~~s  142 (234)
T PRK07577         78 IALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGALD---------------RTSYSAA  142 (234)
T ss_pred             CCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCCC---------------chHHHHH
Confidence            7432      11234457889999988887776442   1467999999987665321               2669999


Q ss_pred             HHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHH
Q 019878          146 KAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAA  221 (334)
Q Consensus       146 K~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~  221 (334)
                      |...|.+.+.+.    ++|++++++||+.+..+................... .+        .......+|+++++..+
T Consensus       143 K~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~-~~--------~~~~~~~~~~a~~~~~l  213 (234)
T PRK07577        143 KSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLAS-IP--------MRRLGTPEEVAAAIAFL  213 (234)
T ss_pred             HHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhc-CC--------CCCCcCHHHHHHHHHHH
Confidence            999988877654    458999999999998764211100001111111111 11        11244689999999999


Q ss_pred             hhcC---CCCCeEEecC
Q 019878          222 MEKG---RSGERYLLTG  235 (334)
Q Consensus       222 ~~~~---~~g~~~~i~g  235 (334)
                      +..+   ..|+++.+.|
T Consensus       214 ~~~~~~~~~g~~~~~~g  230 (234)
T PRK07577        214 LSDDAGFITGQVLGVDG  230 (234)
T ss_pred             hCcccCCccceEEEecC
Confidence            8764   3578888854

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.85  E-value=2.8e-20  Score=160.23  Aligned_cols=212  Identities=18%  Similarity=0.151  Sum_probs=149.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++||||||+|+||+++++.|+++|++|++++|++.....+..     ..++.++.+|++|.+++..+++       ++|+
T Consensus         6 k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   85 (258)
T PRK07890          6 KVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRVDA   85 (258)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCccE
Confidence            479999999999999999999999999999998754322110     1257899999999988876653       4799


Q ss_pred             EEEeccccCC-------CCCCcccchhhhhHHHHHHHHHHHhcC--CCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           69 IFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        69 vih~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      |||+||....       ..+++...++.|+.++..+++++.+..  ..+++|++||...+.+..              +.
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~--------------~~  151 (258)
T PRK07890         86 LVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQP--------------KY  151 (258)
T ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCC--------------Cc
Confidence            9999986322       112345678999999999999997641  124899999976654322              13


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchh--------HHHHHHHHHHcCCCCccccCCCCcee
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGN--------LVAKLMIERFNGRLPGYIGYGNDRFS  207 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (334)
                      +.|+.+|.+.+.+.+.+.    ++++++.++||+.++++.......        ......... ...        .....
T Consensus       152 ~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------~~~~~  222 (258)
T PRK07890        152 GAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAET-AAN--------SDLKR  222 (258)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHH-hhc--------CCccc
Confidence            669999999999888765    348999999999999985211000        000111111 111        11224


Q ss_pred             eeeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          208 FCHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       208 ~i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +.+++|+++++..++...   ..|+++.+.|
T Consensus       223 ~~~~~dva~a~~~l~~~~~~~~~G~~i~~~g  253 (258)
T PRK07890        223 LPTDDEVASAVLFLASDLARAITGQTLDVNC  253 (258)
T ss_pred             cCCHHHHHHHHHHHcCHhhhCccCcEEEeCC
Confidence            778999999999988753   3577776653

>PRK06128 oxidoreductase; Provisional

Probab=99.85  E-value=1.5e-19  Score=159.11  Aligned_cols=210  Identities=17%  Similarity=0.148  Sum_probs=151.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC--CC----CC-CCCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI--SG----LP-SEGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~----~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      ++|||||+|+||+++++.|+++|++|++..++....  ..    +. ...++.++.+|++|.+++.++++       ++|
T Consensus        57 ~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD  136 (300)
T PRK06128         57 KALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELGGLD  136 (300)
T ss_pred             EEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhCCCC
Confidence            699999999999999999999999999887754321  10    10 01257889999999988777664       589


Q ss_pred             EEEEeccccCC-------CCCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           68 VIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        68 ~vih~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      +|||+||....       ..+++...+++|+.++.++++++.+.. ...++|++||...|.....              .
T Consensus       137 ~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~  202 (300)
T PRK06128        137 ILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPT--------------L  202 (300)
T ss_pred             EEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCC--------------c
Confidence            99999996321       223456789999999999999998652 2259999999888754332              2


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      ..|+.+|.+.+.+.+.+.    .+|+++.+++|+.+.++...... .....+.... ...        ....+.+.+|++
T Consensus       203 ~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~-~~~~~~~~~~-~~~--------p~~r~~~p~dva  272 (300)
T PRK06128        203 LDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGG-QPPEKIPDFG-SET--------PMKRPGQPVEMA  272 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCC-CCHHHHHHHh-cCC--------CCCCCcCHHHHH
Confidence            569999999998888765    35899999999999998532111 1111121111 111        122466899999


Q ss_pred             HHHHHHhhcCC---CCCeEEecC
Q 019878          216 DGHIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       216 ~a~~~~~~~~~---~g~~~~i~g  235 (334)
                      .++..++....   .|+++++.|
T Consensus       273 ~~~~~l~s~~~~~~~G~~~~v~g  295 (300)
T PRK06128        273 PLYVLLASQESSYVTGEVFGVTG  295 (300)
T ss_pred             HHHHHHhCccccCccCcEEeeCC
Confidence            99999887532   588999964

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.85  E-value=1.9e-20  Score=160.37  Aligned_cols=200  Identities=19%  Similarity=0.186  Sum_probs=139.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCEEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih   71 (334)
                      |+|+||||+|+||.++++.|+++|++|++++|++++...+..  ..++.++.+|+.|.+++.++++       ++|.|||
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~   80 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN   80 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            899999999999999999999999999999998764332211  1268899999999988877664       5899999


Q ss_pred             eccccC---C----CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccCh
Q 019878           72 TAALVE---P----WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (334)
Q Consensus        72 ~a~~~~---~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  141 (334)
                      +||...   +    ..+++...+++|+.++..+++.+.++   .+.+++|++||...+....              ..+.
T Consensus        81 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------------~~~~  146 (248)
T PRK10538         81 NAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYA--------------GGNV  146 (248)
T ss_pred             CCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCC--------------CCch
Confidence            998632   1    11234567899999976666665432   2467999999976542211              1367


Q ss_pred             HHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHH
Q 019878          142 YERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDG  217 (334)
Q Consensus       142 Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  217 (334)
                      |+.+|.+.+.+.+.+.    ..|+++.+++||.+.|+..... . +...... . ..   .+    ....++..+|+|++
T Consensus       147 Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~-~-~~~~~~~-~-~~---~~----~~~~~~~~~dvA~~  215 (248)
T PRK10538        147 YGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNV-R-FKGDDGK-A-EK---TY----QNTVALTPEDVSEA  215 (248)
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchh-h-ccCcHHH-H-Hh---hc----cccCCCCHHHHHHH
Confidence            9999999998887764    3489999999999987632100 0 0000000 0 00   00    01135689999999


Q ss_pred             HHHHhhcC
Q 019878          218 HIAAMEKG  225 (334)
Q Consensus       218 ~~~~~~~~  225 (334)
                      +..++..+
T Consensus       216 ~~~l~~~~  223 (248)
T PRK10538        216 VWWVATLP  223 (248)
T ss_pred             HHHHhcCC
Confidence            99998755

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.84  E-value=4.8e-20  Score=160.39  Aligned_cols=157  Identities=23%  Similarity=0.322  Sum_probs=121.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc--------CCCEEEEec
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--------GCHVIFHTA   73 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--------~~d~vih~a   73 (334)
                      +||||||+|+||.++++.|+++|++|++++|+++....+.. .+++++.+|++|.+++..+++        .+|+|||+|
T Consensus         6 ~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~-~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~~A   84 (277)
T PRK05993          6 SILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA-EGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFNNG   84 (277)
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-CCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEECC
Confidence            59999999999999999999999999999998765443332 257899999999988766653        479999999


Q ss_pred             cccCCC------CCCcccchhhhhHH----HHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHH
Q 019878           74 ALVEPW------LPDPSRFFAVNVEG----LKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (334)
Q Consensus        74 ~~~~~~------~~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (334)
                      |.....      .++....+++|+.+    ++.++..+++. +.+++|++||...+.+..              +.+.|+
T Consensus        85 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~-~~g~iv~isS~~~~~~~~--------------~~~~Y~  149 (277)
T PRK05993         85 AYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ-GQGRIVQCSSILGLVPMK--------------YRGAYN  149 (277)
T ss_pred             CcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc-CCCEEEEECChhhcCCCC--------------ccchHH
Confidence            874321      11234578899999    56666667665 567999999975543221              136799


Q ss_pred             HHHHHHHHHHHHHh----hcCCCEEEEecCceecC
Q 019878          144 RSKAVADKIALQAA----SEGLPIVPVYPGVIYGP  174 (334)
Q Consensus       144 ~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~  174 (334)
                      .+|++.|.+.+.+.    ++|+++++++||.+-.+
T Consensus       150 asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~  184 (277)
T PRK05993        150 ASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETR  184 (277)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCc
Confidence            99999999887653    46999999999998765

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.84  E-value=6.5e-20  Score=157.41  Aligned_cols=212  Identities=18%  Similarity=0.149  Sum_probs=148.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcC-------CCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG-------CHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-------~d~vih~a~   74 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+...  ..  ...+.++++|+.|.+++.+++++       +|+|||+||
T Consensus        10 ~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~~--~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag   85 (252)
T PRK08220         10 TVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLT--QE--DYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAG   85 (252)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEecchhh--hc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            69999999999999999999999999999998611  11  12688999999999988887653       799999999


Q ss_pred             ccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChHHHH
Q 019878           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (334)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (334)
                      ....      ..+++...+++|+.++..+++++...   .+..++|++||.....+..              ..+.|+.+
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~--------------~~~~Y~~s  151 (252)
T PRK08220         86 ILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRI--------------GMAAYGAS  151 (252)
T ss_pred             cCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCC--------------CCchhHHH
Confidence            7432      12245567899999999999998643   1345899999975543221              13679999


Q ss_pred             HHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCc--hhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHH
Q 019878          146 KAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTT--GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHI  219 (334)
Q Consensus       146 K~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  219 (334)
                      |.+.+.+.+.+.    .+|+++++++|+.++++.....  .........   .+. ............+++++|+++++.
T Consensus       152 K~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~dva~~~~  227 (252)
T PRK08220        152 KAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVI---AGF-PEQFKLGIPLGKIARPQEIANAVL  227 (252)
T ss_pred             HHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhh---hhH-HHHHhhcCCCcccCCHHHHHHHHH
Confidence            999999887765    3589999999999999853210  000000000   000 000011112345889999999999


Q ss_pred             HHhhcC---CCCCeEEecC
Q 019878          220 AAMEKG---RSGERYLLTG  235 (334)
Q Consensus       220 ~~~~~~---~~g~~~~i~g  235 (334)
                      .++...   ..|++..+.|
T Consensus       228 ~l~~~~~~~~~g~~i~~~g  246 (252)
T PRK08220        228 FLASDLASHITLQDIVVDG  246 (252)
T ss_pred             HHhcchhcCccCcEEEECC
Confidence            988653   2466666643

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.84  E-value=2.2e-20  Score=160.06  Aligned_cols=211  Identities=18%  Similarity=0.164  Sum_probs=146.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEE-EcCCCCCCC----CCC-CCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRAL-VRRTSDISG----LPS-EGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~----~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      +++|||||+|+||++++++|+++|++|+++ .|+.++...    +.. ..++.++.+|++|.+++.++++       .+|
T Consensus         5 ~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (250)
T PRK08063          5 KVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRLD   84 (250)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            369999999999999999999999998774 665433211    110 1257889999999998877765       489


Q ss_pred             EEEEeccccCC--CC----CCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           68 VIFHTAALVEP--WL----PDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        68 ~vih~a~~~~~--~~----~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      +|||+||....  ..    .+....+++|+.++.++++++.+.   .+.++||++||...+....              +
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~--------------~  150 (250)
T PRK08063         85 VFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLE--------------N  150 (250)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCC--------------C
Confidence            99999986321  11    112335789999999999988764   2346999999976543221              1


Q ss_pred             cChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      .+.|+.+|.+.|.+.+.+.    +.|+++++++|+.+..+........ .... .......+        ...+++++|+
T Consensus       151 ~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~-~~~~-~~~~~~~~--------~~~~~~~~dv  220 (250)
T PRK08063        151 YTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNR-EELL-EDARAKTP--------AGRMVEPEDV  220 (250)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCc-hHHH-HHHhcCCC--------CCCCcCHHHH
Confidence            3679999999999988764    3589999999999987642111110 1111 11111111        1247889999


Q ss_pred             HHHHHHHhhcCC---CCCeEEecC
Q 019878          215 VDGHIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       215 a~a~~~~~~~~~---~g~~~~i~g  235 (334)
                      ++++..++..+.   .|+.+++.|
T Consensus       221 a~~~~~~~~~~~~~~~g~~~~~~g  244 (250)
T PRK08063        221 ANAVLFLCSPEADMIRGQTIIVDG  244 (250)
T ss_pred             HHHHHHHcCchhcCccCCEEEECC
Confidence            999999987642   588888864

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.84  E-value=5.8e-20  Score=158.73  Aligned_cols=199  Identities=18%  Similarity=0.185  Sum_probs=143.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----C-CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++||||||+|+||.++++.|+++|++|++++|++.+...+    . ...++.++.+|+.|.+.+..+++       ++|+
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   81 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI   81 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4699999999999999999999999999999986432211    1 11258889999999998877765       5899


Q ss_pred             EEEeccccCCC--C-----CCcccchhhhhHHHHHHHHHHHhc--CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           69 IFHTAALVEPW--L-----PDPSRFFAVNVEGLKNVVQAAKET--KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        69 vih~a~~~~~~--~-----~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      |||+||.....  .     +.....+++|+.++.++++.+.+.  ...+++|++||...+.+...              .
T Consensus        82 vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~  147 (263)
T PRK06181         82 LVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPT--------------R  147 (263)
T ss_pred             EEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCC--------------c
Confidence            99999874321  1     112346899999999999998642  13468999999877753321              3


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      +.|+.+|.+.+.+.+.+.    ++++++++++|+.+..+....       .+.  ..+...  ...+.+..++++++|++
T Consensus       148 ~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~-------~~~--~~~~~~--~~~~~~~~~~~~~~dva  216 (263)
T PRK06181        148 SGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKR-------ALD--GDGKPL--GKSPMQESKIMSAEECA  216 (263)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchh-------hcc--cccccc--ccccccccCCCCHHHHH
Confidence            679999999998887653    358999999999998763211       000  011111  11122334789999999


Q ss_pred             HHHHHHhhc
Q 019878          216 DGHIAAMEK  224 (334)
Q Consensus       216 ~a~~~~~~~  224 (334)
                      +++..++..
T Consensus       217 ~~i~~~~~~  225 (263)
T PRK06181        217 EAILPAIAR  225 (263)
T ss_pred             HHHHHHhhC
Confidence            999999985

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.84  E-value=9.8e-20  Score=155.89  Aligned_cols=209  Identities=22%  Similarity=0.256  Sum_probs=144.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCC-CCCC----CCC-CCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DISG----LPS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~----~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+|+||++++++|+++|++|++..++.+ ....    +.. ...+.++.+|++|.+++.++++       ++|+
T Consensus         4 ~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   83 (248)
T PRK06123          4 VMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRLDA   83 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            4999999999999999999999999887764432 1111    111 1257789999999998877765       5899


Q ss_pred             EEEeccccCC--C-----CCCcccchhhhhHHHHHHHHHHHhcCC------CcEEEEecccce-eccCCCccCCCCCccc
Q 019878           69 IFHTAALVEP--W-----LPDPSRFFAVNVEGLKNVVQAAKETKT------VEKIIYTSSFFA-LGSTDGYIADENQVHE  134 (334)
Q Consensus        69 vih~a~~~~~--~-----~~~~~~~~~~n~~~~~~l~~~~~~~~~------~~~~v~~Ss~~v-~~~~~~~~~~e~~~~~  134 (334)
                      |||+||....  .     .+++...+++|+.++.++++++.+...      -.++|++||... ++....          
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~----------  153 (248)
T PRK06123         84 LVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGE----------  153 (248)
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCC----------
Confidence            9999997432  1     112346789999999999988876421      136999999754 432211          


Q ss_pred             cccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeee
Q 019878          135 EKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCH  210 (334)
Q Consensus       135 ~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  210 (334)
                          ...|+.+|.+.|.+++.+.    ++|++++++||+.++|+......  ....+... .+..+.        .-+.+
T Consensus       154 ----~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~--~~~~~~~~-~~~~p~--------~~~~~  218 (248)
T PRK06123        154 ----YIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGG--EPGRVDRV-KAGIPM--------GRGGT  218 (248)
T ss_pred             ----ccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccC--CHHHHHHH-HhcCCC--------CCCcC
Confidence                1349999999999888764    34899999999999998532111  11222222 222221        11246


Q ss_pred             HHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          211 VDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       211 v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      ++|+++++..++...   ..|++|++.|
T Consensus       219 ~~d~a~~~~~l~~~~~~~~~g~~~~~~g  246 (248)
T PRK06123        219 AEEVARAILWLLSDEASYTTGTFIDVSG  246 (248)
T ss_pred             HHHHHHHHHHHhCccccCccCCEEeecC
Confidence            899999999988754   3588898864

>PLN02253 xanthoxin dehydrogenase

Probab=99.84  E-value=1e-19  Score=158.71  Aligned_cols=213  Identities=19%  Similarity=0.166  Sum_probs=147.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC----CCCCCCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS----GLPSEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      +++|||||+|+||++++++|+++|++|++++|+.....    .+....++.++.+|++|.+++.++++       ++|+|
T Consensus        19 k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~l   98 (280)
T PLN02253         19 KVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIM   98 (280)
T ss_pred             CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCCEE
Confidence            35999999999999999999999999999998754321    11112368899999999998887775       58999


Q ss_pred             EEeccccCCC--------CCCcccchhhhhHHHHHHHHHHHhcC---CCcEEEEecccce-eccCCCccCCCCCcccccc
Q 019878           70 FHTAALVEPW--------LPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFA-LGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        70 ih~a~~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~Ss~~v-~~~~~~~~~~e~~~~~~~~  137 (334)
                      ||+||.....        .+++...+++|+.++.++++++.+..   ...++|++||... ++...              
T Consensus        99 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~--------------  164 (280)
T PLN02253         99 VNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLG--------------  164 (280)
T ss_pred             EECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCC--------------
Confidence            9999974321        12345688999999999999887531   2347888888654 33211              


Q ss_pred             ccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCC---chhHHHHHH---HHHHcCCCCccccCCCCcee
Q 019878          138 FCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLT---TGNLVAKLM---IERFNGRLPGYIGYGNDRFS  207 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  207 (334)
                       ...|+.+|.+.|.+.+.+.    .+|+++..++|+.+.++....   ........+   ........+       ....
T Consensus       165 -~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------l~~~  236 (280)
T PLN02253        165 -PHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNAN-------LKGV  236 (280)
T ss_pred             -CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCC-------CcCC
Confidence             2469999999999888765    348999999999998763210   000000111   111111111       0122


Q ss_pred             eeeHHHHHHHHHHHhhcCC---CCCeEEecC
Q 019878          208 FCHVDDVVDGHIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       208 ~i~v~D~a~a~~~~~~~~~---~g~~~~i~g  235 (334)
                      .++++|+++++..++....   .|..+++.|
T Consensus       237 ~~~~~dva~~~~~l~s~~~~~i~G~~i~vdg  267 (280)
T PLN02253        237 ELTVDDVANAVLFLASDEARYISGLNLMIDG  267 (280)
T ss_pred             CCCHHHHHHHHHhhcCcccccccCcEEEECC
Confidence            4789999999999986532   588888854

>PRK05717 oxidoreductase; Validated

Probab=99.84  E-value=3.3e-20  Score=159.49  Aligned_cols=209  Identities=19%  Similarity=0.161  Sum_probs=147.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+..+...+..  ...+.++.+|++|.+++.++++       ++|+|||+
T Consensus        12 ~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~   91 (255)
T PRK05717         12 VALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDALVCN   91 (255)
T ss_pred             EEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            59999999999999999999999999999887643221110  1257899999999988765543       37999999


Q ss_pred             ccccCCC--------CCCcccchhhhhHHHHHHHHHHHhcC--CCcEEEEecccceeccCCCccCCCCCccccccccChH
Q 019878           73 AALVEPW--------LPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (334)
Q Consensus        73 a~~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y  142 (334)
                      ||.....        .+++...+++|+.++.++++++.+..  ...++|++||...+.....              .+.|
T Consensus        92 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~--------------~~~Y  157 (255)
T PRK05717         92 AAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPD--------------TEAY  157 (255)
T ss_pred             CCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCC--------------Ccch
Confidence            9975321        12345688999999999999997531  2358999998766543221              2569


Q ss_pred             HHHHHHHHHHHHHHhh-c--CCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHH
Q 019878          143 ERSKAVADKIALQAAS-E--GLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHI  219 (334)
Q Consensus       143 ~~sK~~~E~~~~~~~~-~--g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  219 (334)
                      +.+|.+.+.+.+.+.. .  ++++..++|+.+.++.....  .... +........+        ...+.+++|++.++.
T Consensus       158 ~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~--~~~~-~~~~~~~~~~--------~~~~~~~~~va~~~~  226 (255)
T PRK05717        158 AASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQR--RAEP-LSEADHAQHP--------AGRVGTVEDVAAMVA  226 (255)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccc--cchH-HHHHHhhcCC--------CCCCcCHHHHHHHHH
Confidence            9999999999888753 2  58999999999998743211  0001 1111111111        123678999999999


Q ss_pred             HHhhcC---CCCCeEEecC
Q 019878          220 AAMEKG---RSGERYLLTG  235 (334)
Q Consensus       220 ~~~~~~---~~g~~~~i~g  235 (334)
                      .++...   ..|.++.+.|
T Consensus       227 ~l~~~~~~~~~g~~~~~~g  245 (255)
T PRK05717        227 WLLSRQAGFVTGQEFVVDG  245 (255)
T ss_pred             HHcCchhcCccCcEEEECC
Confidence            888653   2477888754

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.84  E-value=5.5e-20  Score=157.60  Aligned_cols=210  Identities=19%  Similarity=0.186  Sum_probs=150.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CC-CCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++++||||+|+||+++++.|+++|++|++++|++++....    .. ..++.++.+|++|.+++.++++       ++|+
T Consensus         8 ~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   87 (250)
T PRK12939          8 KRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGLDG   87 (250)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4699999999999999999999999999999876532211    11 1258899999999998877763       5899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      |||+||....      ..++.+..++.|+.++.++++++.+.   .+..++|++||...+.+...              .
T Consensus        88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  153 (250)
T PRK12939         88 LVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPK--------------L  153 (250)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCC--------------c
Confidence            9999997432      11233456789999999999988654   12349999999766543321              2


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      ..|+.+|.+.|.+.+.+.    +.+++++.++|+.+..+.......  .........         ....+.+++++|++
T Consensus       154 ~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~---------~~~~~~~~~~~dva  222 (250)
T PRK12939        154 GAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA--DERHAYYLK---------GRALERLQVPDDVA  222 (250)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC--hHHHHHHHh---------cCCCCCCCCHHHHH
Confidence            569999999999888754    358999999999987764321110  011111111         12334578999999


Q ss_pred             HHHHHHhhcC---CCCCeEEecC
Q 019878          216 DGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       216 ~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +++..++...   ..|+++++.|
T Consensus       223 ~~~~~l~~~~~~~~~G~~i~~~g  245 (250)
T PRK12939        223 GAVLFLLSDAARFVTGQLLPVNG  245 (250)
T ss_pred             HHHHHHhCccccCccCcEEEECC
Confidence            9999999764   2688888865

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.84  E-value=9.7e-20  Score=157.00  Aligned_cols=213  Identities=18%  Similarity=0.194  Sum_probs=149.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CC-CCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      +++|||||+|+||.++++.|+++|++|++++|+.++.+..    .. ..++.++.+|++|.+++.++++       ++|+
T Consensus        13 k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id~   92 (259)
T PRK08213         13 KTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHVDI   92 (259)
T ss_pred             CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            3699999999999999999999999999999976542211    11 1257889999999998866553       4899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc----CCCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      |||+||....      ..+.+...++.|+.++.++++++.+.    .+.++||++||...+.......          .+
T Consensus        93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~----------~~  162 (259)
T PRK08213         93 LVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEV----------MD  162 (259)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccc----------cC
Confidence            9999986321      11223457789999999999988654    2456999999976654332110          11


Q ss_pred             cChHHHHHHHHHHHHHHHhh----cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          139 CTQYERSKAVADKIALQAAS----EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~~----~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      ...|+.+|++.|.+++.+.+    +|+++.+++|+.+-.+...   ..+..+......+.+..         -+...+|+
T Consensus       163 ~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~---~~~~~~~~~~~~~~~~~---------~~~~~~~v  230 (259)
T PRK08213        163 TIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTR---GTLERLGEDLLAHTPLG---------RLGDDEDL  230 (259)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchh---hhhHHHHHHHHhcCCCC---------CCcCHHHH
Confidence            36799999999999888653    4899999999988765321   12233322222222221         23458999


Q ss_pred             HHHHHHHhhcC---CCCCeEEecC
Q 019878          215 VDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       215 a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      ++++..++...   ..|..+++.+
T Consensus       231 a~~~~~l~~~~~~~~~G~~~~~~~  254 (259)
T PRK08213        231 KGAALLLASDASKHITGQILAVDG  254 (259)
T ss_pred             HHHHHHHhCccccCccCCEEEECC
Confidence            99998888653   2588888864

>PRK08264 short chain dehydrogenase; Validated

Probab=99.84  E-value=3.1e-19  Score=151.85  Aligned_cols=157  Identities=21%  Similarity=0.184  Sum_probs=124.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc---CCCEEEEeccc-c
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF---GCHVIFHTAAL-V   76 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---~~d~vih~a~~-~   76 (334)
                      +||||||+|+||+++++.|+++|+ +|++++|+.++...  ...+++++.+|+.|.+.+.++++   .+|+|||+||. .
T Consensus         8 ~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~~   85 (238)
T PRK08264          8 VVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD--LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAGIFR   85 (238)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh--cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCCcCC
Confidence            599999999999999999999998 99999998765543  22378999999999999888776   48999999997 2


Q ss_pred             CC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHH
Q 019878           77 EP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (334)
Q Consensus        77 ~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~  147 (334)
                      ..      ..+++...+++|+.++.++++++.+.   .+.+++|++||...+.+...              .+.|+.+|.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~--------------~~~y~~sK~  151 (238)
T PRK08264         86 TGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPN--------------LGTYSASKA  151 (238)
T ss_pred             CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCC--------------chHhHHHHH
Confidence            21      11234557889999999999987642   24568999999877653321              367999999


Q ss_pred             HHHHHHHHHhh----cCCCEEEEecCceecC
Q 019878          148 VADKIALQAAS----EGLPIVPVYPGVIYGP  174 (334)
Q Consensus       148 ~~E~~~~~~~~----~g~~~~ilR~~~v~G~  174 (334)
                      +.|.+.+.+..    .|++++++||+.+.++
T Consensus       152 a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~  182 (238)
T PRK08264        152 AAWSLTQALRAELAPQGTRVLGVHPGPIDTD  182 (238)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeCCccccc
Confidence            99988887653    4899999999999765

>PRK08017 oxidoreductase; Provisional

Probab=99.84  E-value=5.1e-20  Score=158.44  Aligned_cols=201  Identities=20%  Similarity=0.155  Sum_probs=141.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc--------CCCEEEEec
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--------GCHVIFHTA   73 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--------~~d~vih~a   73 (334)
                      +||||||+|+||+++++.|+++|++|++++|+.++.+.+.. .+++++.+|+.|.+++..+++        .+|.+||+|
T Consensus         4 ~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~a   82 (256)
T PRK08017          4 SVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS-LGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNA   82 (256)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh-CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECC
Confidence            69999999999999999999999999999998765443322 257889999999887665442        368999999


Q ss_pred             cccCC------CCCCcccchhhhhHHHHHH----HHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHH
Q 019878           74 ALVEP------WLPDPSRFFAVNVEGLKNV----VQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (334)
Q Consensus        74 ~~~~~------~~~~~~~~~~~n~~~~~~l----~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (334)
                      |....      ..++.+..++.|+.++.++    ++.+++. +.+++|++||...+.+..              ..+.|+
T Consensus        83 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~iv~~ss~~~~~~~~--------------~~~~Y~  147 (256)
T PRK08017         83 GFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPH-GEGRIVMTSSVMGLISTP--------------GRGAYA  147 (256)
T ss_pred             CCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCCEEEEEcCcccccCCC--------------CccHHH
Confidence            86321      1123446789999988776    5555555 567999999964443221              136799


Q ss_pred             HHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHH
Q 019878          144 RSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHI  219 (334)
Q Consensus       144 ~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  219 (334)
                      .+|...|.+.+.+    ...+++++++||+.+..+...       . +... ....+ ....+...+.+++++|+++++.
T Consensus       148 ~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~-------~-~~~~-~~~~~-~~~~~~~~~~~~~~~d~a~~~~  217 (256)
T PRK08017        148 ASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTD-------N-VNQT-QSDKP-VENPGIAARFTLGPEAVVPKLR  217 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhh-------c-ccch-hhccc-hhhhHHHhhcCCCHHHHHHHHH
Confidence            9999999887654    345899999999887554210       0 0000 00111 1122334456899999999999


Q ss_pred             HHhhcCCCC
Q 019878          220 AAMEKGRSG  228 (334)
Q Consensus       220 ~~~~~~~~g  228 (334)
                      .+++++...
T Consensus       218 ~~~~~~~~~  226 (256)
T PRK08017        218 HALESPKPK  226 (256)
T ss_pred             HHHhCCCCC
Confidence            999876543

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.83  E-value=3e-19  Score=152.73  Aligned_cols=209  Identities=22%  Similarity=0.225  Sum_probs=146.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC-C----CCC-CCCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-S----GLP-SEGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~----~~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      +++|||||+|+||+++++.|+++|++|+++.|+..+. .    .+. ...++.++.+|+.|.+++.++++       ++|
T Consensus         6 ~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   85 (248)
T PRK05557          6 KVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGGVD   85 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4699999999999999999999999998888876421 0    011 11368889999999998877664       479


Q ss_pred             EEEEeccccCCC------CCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccce-eccCCCccCCCCCcccccc
Q 019878           68 VIFHTAALVEPW------LPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFA-LGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        68 ~vih~a~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v-~~~~~~~~~~e~~~~~~~~  137 (334)
                      +|||+||.....      .+.+...+..|+.++.++++.+.+.   .+.+++|++||... ++...              
T Consensus        86 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~--------------  151 (248)
T PRK05557         86 ILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPG--------------  151 (248)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCC--------------
Confidence            999999874321      1123456789999999999988764   23568999998643 33221              


Q ss_pred             ccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHH
Q 019878          138 FCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                       ...|+.+|.+.+.+++.+.    ..+++++++||+.+.++....   .............         ....+.+++|
T Consensus       152 -~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~---~~~~~~~~~~~~~---------~~~~~~~~~~  218 (248)
T PRK05557        152 -QANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDA---LPEDVKEAILAQI---------PLGRLGQPEE  218 (248)
T ss_pred             -CchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccc---cChHHHHHHHhcC---------CCCCCcCHHH
Confidence             2669999999998877654    348999999999886653221   1112222211111         1123678999


Q ss_pred             HHHHHHHHhhcC---CCCCeEEecCC
Q 019878          214 VVDGHIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       214 ~a~a~~~~~~~~---~~g~~~~i~g~  236 (334)
                      +++++..++...   ..|++|+++|.
T Consensus       219 va~~~~~l~~~~~~~~~g~~~~i~~~  244 (248)
T PRK05557        219 IASAVAFLASDEAAYITGQTLHVNGG  244 (248)
T ss_pred             HHHHHHHHcCcccCCccccEEEecCC
Confidence            999999888652   25889999753

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.83  E-value=8.5e-20  Score=159.69  Aligned_cols=210  Identities=16%  Similarity=0.173  Sum_probs=151.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC-CC----CCC-CCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-SG----LPS-EGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~----~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      |++|||||+|+||.++++.|+++|++|++++|+.... ..    +.. ..++.++.+|+.|.+.+.++++       ++|
T Consensus        47 k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~iD  126 (290)
T PRK06701         47 KVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGRLD  126 (290)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            4699999999999999999999999999999875321 10    111 1257889999999998877664       489


Q ss_pred             EEEEeccccCC--C-----CCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           68 VIFHTAALVEP--W-----LPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        68 ~vih~a~~~~~--~-----~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      +|||+||....  .     .+++...++.|+.++.++++++.+.. ...++|++||...|.....              .
T Consensus       127 ~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~--------------~  192 (290)
T PRK06701        127 ILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNET--------------L  192 (290)
T ss_pred             EEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCC--------------c
Confidence            99999996321  1     12335578999999999999998641 2358999999888764432              2


Q ss_pred             ChHHHHHHHHHHHHHHHhh----cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          140 TQYERSKAVADKIALQAAS----EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~~----~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      ..|+.+|.+.+.+.+.+..    .|++++.++|+.++.+.....  ..........         .......+.+++|++
T Consensus       193 ~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~--~~~~~~~~~~---------~~~~~~~~~~~~dva  261 (290)
T PRK06701        193 IDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSD--FDEEKVSQFG---------SNTPMQRPGQPEELA  261 (290)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccc--cCHHHHHHHH---------hcCCcCCCcCHHHHH
Confidence            4599999999988887653    489999999999988743211  1111111111         111234578999999


Q ss_pred             HHHHHHhhcC---CCCCeEEecC
Q 019878          216 DGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       216 ~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +++..++...   ..|.++++.|
T Consensus       262 ~~~~~ll~~~~~~~~G~~i~idg  284 (290)
T PRK06701        262 PAYVFLASPDSSYITGQMLHVNG  284 (290)
T ss_pred             HHHHHHcCcccCCccCcEEEeCC
Confidence            9999998764   2588888864

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.1e-19  Score=155.59  Aligned_cols=209  Identities=16%  Similarity=0.161  Sum_probs=143.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      +++||||+|+||++++++|+++|++|++++|+.+....+..  ..++.++.+|+.|.+++..+++       ++|+|||+
T Consensus         8 ~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~   87 (249)
T PRK06500          8 TALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAVFIN   87 (249)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            69999999999999999999999999999997543221110  1257889999999887655543       58999999


Q ss_pred             ccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccc-eeccCCCccCCCCCccccccccChHHH
Q 019878           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFF-ALGSTDGYIADENQVHEEKYFCTQYER  144 (334)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~-v~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (334)
                      ||....      ..+++...+++|+.++.++++++.+.. ...++|++||.. .|+...               .+.|+.
T Consensus        88 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~---------------~~~Y~~  152 (249)
T PRK06500         88 AGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPN---------------SSVYAA  152 (249)
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCC---------------ccHHHH
Confidence            997432      112345688999999999999998631 224677777643 444211               367999


Q ss_pred             HHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCC---chhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHH
Q 019878          145 SKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLT---TGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDG  217 (334)
Q Consensus       145 sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  217 (334)
                      +|.+.|.+.+.+.    .+|+++.++||+.++++....   .......+........+.         .-+..++|++++
T Consensus       153 sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~va~~  223 (249)
T PRK06500        153 SKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPL---------GRFGTPEEIAKA  223 (249)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCC---------CCCcCHHHHHHH
Confidence            9999999997654    358999999999999873210   011111222222222111         124578999999


Q ss_pred             HHHHhhcCC---CCCeEEec
Q 019878          218 HIAAMEKGR---SGERYLLT  234 (334)
Q Consensus       218 ~~~~~~~~~---~g~~~~i~  234 (334)
                      +..++....   .|....+.
T Consensus       224 ~~~l~~~~~~~~~g~~i~~~  243 (249)
T PRK06500        224 VLYLASDESAFIVGSEIIVD  243 (249)
T ss_pred             HHHHcCccccCccCCeEEEC
Confidence            999886532   46666664

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.83  E-value=4.4e-20  Score=159.05  Aligned_cols=219  Identities=16%  Similarity=0.147  Sum_probs=151.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC---CC-CCCCeEEEEcCCCChhhHHHHhc-------CCCEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG---LP-SEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vi   70 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+++....   +. ...++.++.+|+++.+++.++++       ++|+||
T Consensus         9 ~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   88 (258)
T PRK08628          9 VVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRIDGLV   88 (258)
T ss_pred             EEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            59999999999999999999999999999998764310   00 11368899999999998877775       489999


Q ss_pred             EeccccCCC-----CCCcccchhhhhHHHHHHHHHHHhcC--CCcEEEEecccceeccCCCccCCCCCccccccccChHH
Q 019878           71 HTAALVEPW-----LPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (334)
Q Consensus        71 h~a~~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (334)
                      |+||.....     .++....++.|+.++.++++.+.+..  ..+++|++||...+.+..              +...|+
T Consensus        89 ~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~--------------~~~~Y~  154 (258)
T PRK08628         89 NNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQG--------------GTSGYA  154 (258)
T ss_pred             ECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCC--------------CCchhH
Confidence            999963221     12345578899999999988886431  235899999976653321              136799


Q ss_pred             HHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHH---HHHHHHHHcCCCCccccCCCCceeeeeHHHHHH
Q 019878          144 RSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLV---AKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVD  216 (334)
Q Consensus       144 ~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  216 (334)
                      .+|...+.+.+.+.    .+|++++.++|+.++++........+   ........ ...+    .+   ..++.++|+++
T Consensus       155 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~----~~---~~~~~~~dva~  226 (258)
T PRK08628        155 AAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAIT-AKIP----LG---HRMTTAEEIAD  226 (258)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHH-hcCC----cc---ccCCCHHHHHH
Confidence            99999999988765    35899999999999987421100000   00011111 1111    01   13677999999


Q ss_pred             HHHHHhhcC---CCCCeEEecCCCCCHHH
Q 019878          217 GHIAAMEKG---RSGERYLLTGENASFMQ  242 (334)
Q Consensus       217 a~~~~~~~~---~~g~~~~i~g~~~s~~e  242 (334)
                      ++..++...   ..|..+.+.|....+++
T Consensus       227 ~~~~l~~~~~~~~~g~~~~~~gg~~~~~~  255 (258)
T PRK08628        227 TAVFLLSERSSHTTGQWLFVDGGYVHLDR  255 (258)
T ss_pred             HHHHHhChhhccccCceEEecCCcccccc
Confidence            999998764   35778888654444333

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.6e-19  Score=155.58  Aligned_cols=211  Identities=15%  Similarity=0.140  Sum_probs=147.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCC-CCCCC-----CCCCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DISGL-----PSEGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~-----~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      |++|||||+|+||.++++.|+++|++|+++.++.. ....+     ....++.++.+|++|.+++.++++       ++|
T Consensus        10 k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~iD   89 (258)
T PRK09134         10 RAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGPIT   89 (258)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            46999999999999999999999999988876532 21111     011258889999999998877764       379


Q ss_pred             EEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC---CCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        68 ~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      +|||+||....      ..+++...+++|+.++.++++++.+..   ..+++|++||...+...+              .
T Consensus        90 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p--------------~  155 (258)
T PRK09134         90 LLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNP--------------D  155 (258)
T ss_pred             EEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCC--------------C
Confidence            99999996432      112345678999999999999887652   235788888765543221              1


Q ss_pred             cChHHHHHHHHHHHHHHHhhc---CCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          139 CTQYERSKAVADKIALQAASE---GLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~~~---g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      ...|+.+|.+.|.+.+.+.+.   +++++.++|+.++.......     ..+........   .+      ...+++|+|
T Consensus       156 ~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~-----~~~~~~~~~~~---~~------~~~~~~d~a  221 (258)
T PRK09134        156 FLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQSP-----EDFARQHAATP---LG------RGSTPEEIA  221 (258)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccCh-----HHHHHHHhcCC---CC------CCcCHHHHH
Confidence            256999999999988887642   48999999999876532111     11122221111   11      236799999


Q ss_pred             HHHHHHhhcCC-CCCeEEecC-CCCC
Q 019878          216 DGHIAAMEKGR-SGERYLLTG-ENAS  239 (334)
Q Consensus       216 ~a~~~~~~~~~-~g~~~~i~g-~~~s  239 (334)
                      +++..+++++. .|+.+++.| ..++
T Consensus       222 ~~~~~~~~~~~~~g~~~~i~gg~~~~  247 (258)
T PRK09134        222 AAVRYLLDAPSVTGQMIAVDGGQHLA  247 (258)
T ss_pred             HHHHHHhcCCCcCCCEEEECCCeecc
Confidence            99999998764 588888864 4443

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.83  E-value=5.8e-19  Score=152.23  Aligned_cols=207  Identities=19%  Similarity=0.186  Sum_probs=145.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHh-------cCCCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC-------FGCHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~-------~~~d~vih~a   73 (334)
                      +++|||||+|+||+++++.|+++|++|++++|+....  ..  .++.++.+|+.|.+.+.+++       ..+|+|||+|
T Consensus        10 k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~--~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~a   85 (260)
T PRK06523         10 KRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD--LP--EGVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVL   85 (260)
T ss_pred             CEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh--cC--CceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            3699999999999999999999999999999986542  11  26889999999998776554       3489999999


Q ss_pred             cccCC--------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChH
Q 019878           74 ALVEP--------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (334)
Q Consensus        74 ~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y  142 (334)
                      |....        ..++++..+++|+.++.++++++.++   .+..++|++||...+....             .....|
T Consensus        86 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~-------------~~~~~Y  152 (260)
T PRK06523         86 GGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLP-------------ESTTAY  152 (260)
T ss_pred             cccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCC-------------CCcchh
Confidence            95321        12345567889999998887766432   1346899999976554211             013679


Q ss_pred             HHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHH-----------HHHHH--cCCCCccccCCCCc
Q 019878          143 ERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKL-----------MIERF--NGRLPGYIGYGNDR  205 (334)
Q Consensus       143 ~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~-----------~~~~~--~~~~~~~~~~~~~~  205 (334)
                      +.+|.+.+.+.+.+.    +.|+++.+++|+.+.++...   .....+           .....  .+..        ..
T Consensus       153 ~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------p~  221 (260)
T PRK06523        153 AAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAV---ALAERLAEAAGTDYEGAKQIIMDSLGGI--------PL  221 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHH---HHHHHHHhhcCCCHHHHHHHHHHHhccC--------cc
Confidence            999999988877754    35899999999999887421   111100           00000  0111        11


Q ss_pred             eeeeeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          206 FSFCHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       206 ~~~i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      ..+..++|+++++..++...   ..|+.+.+.|
T Consensus       222 ~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdg  254 (260)
T PRK06523        222 GRPAEPEEVAELIAFLASDRAASITGTEYVIDG  254 (260)
T ss_pred             CCCCCHHHHHHHHHHHhCcccccccCceEEecC
Confidence            23557899999999998753   3588888864

>PRK08324 short chain dehydrogenase; Validated

Probab=99.83  E-value=5.6e-20  Score=178.26  Aligned_cols=217  Identities=21%  Similarity=0.193  Sum_probs=155.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vi   70 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+....    +....++.++.+|++|.+++.++++       ++|+||
T Consensus       424 ~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI  503 (681)
T PRK08324        424 VALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVV  503 (681)
T ss_pred             EEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            59999999999999999999999999999998754321    1111368899999999998877664       589999


Q ss_pred             EeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCC-cEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTV-EKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        71 h~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~-~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      |+||....      ...++...+++|+.++.++++++.+.   .+. .+||++||...+.....              .+
T Consensus       504 ~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~--------------~~  569 (681)
T PRK08324        504 SNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPN--------------FG  569 (681)
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCC--------------cH
Confidence            99996432      11234567899999999998877543   122 68999999766543221              36


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCcee-cCCCCCchhHHHHHHHHHHcCCCC----ccccCCCCceeeeeH
Q 019878          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIY-GPGKLTTGNLVAKLMIERFNGRLP----GYIGYGNDRFSFCHV  211 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~-G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~v  211 (334)
                      .|+.+|.+.+.+.+.+.    ..|+++.+++|+.+| +.+.... .+.  .......+...    ..++.+...+.++++
T Consensus       570 ~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~-~~~--~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~  646 (681)
T PRK08324        570 AYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTG-EWI--EARAAAYGLSEEELEEFYRARNLLKREVTP  646 (681)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccc-hhh--hhhhhhccCChHHHHHHHHhcCCcCCccCH
Confidence            79999999999988765    347999999999998 6543211 110  00111112111    133445667789999


Q ss_pred             HHHHHHHHHHhh--c-CCCCCeEEecC
Q 019878          212 DDVVDGHIAAME--K-GRSGERYLLTG  235 (334)
Q Consensus       212 ~D~a~a~~~~~~--~-~~~g~~~~i~g  235 (334)
                      +|+++++..++.  . ...|.++++.|
T Consensus       647 ~DvA~a~~~l~s~~~~~~tG~~i~vdg  673 (681)
T PRK08324        647 EDVAEAVVFLASGLLSKTTGAIITVDG  673 (681)
T ss_pred             HHHHHHHHHHhCccccCCcCCEEEECC
Confidence            999999999884  2 23688999964

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.83  E-value=6e-20  Score=157.08  Aligned_cols=211  Identities=18%  Similarity=0.179  Sum_probs=142.7

Q ss_pred             Cc-EEEEcCCChhhHHHHHHHHhCCCeEEEE-EcCCCCCCC----CCC-CCCeEEEEcCCCChhhHHHHhc-------CC
Q 019878            1 MK-ILVSGASGYLGGRLCHALLKQGHSVRAL-VRRTSDISG----LPS-EGALELVYGDVTDYRSLVDACF-------GC   66 (334)
Q Consensus         1 m~-ilItG~tG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~----~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~   66 (334)
                      |+ +|||||+|+||+++++.|+++|++|+++ .|++++...    +.. ...+.++.+|+.|.+++.++++       ++
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i   80 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPL   80 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence            54 8999999999999999999999999875 454432211    111 1257889999999998887765       36


Q ss_pred             CEEEEeccccCC--C-----CCCcccchhhhhHHHHHHHHHHHhcC------CCcEEEEecccceeccCCCccCCCCCcc
Q 019878           67 HVIFHTAALVEP--W-----LPDPSRFFAVNVEGLKNVVQAAKETK------TVEKIIYTSSFFALGSTDGYIADENQVH  133 (334)
Q Consensus        67 d~vih~a~~~~~--~-----~~~~~~~~~~n~~~~~~l~~~~~~~~------~~~~~v~~Ss~~v~~~~~~~~~~e~~~~  133 (334)
                      |+|||+||....  .     .++....+++|+.++..+++.+....      ...+||++||...+...+..        
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~--------  152 (247)
T PRK09730         81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGE--------  152 (247)
T ss_pred             CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCc--------
Confidence            899999996421  1     11234678999999988887765541      12469999997654322110        


Q ss_pred             ccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeee
Q 019878          134 EEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFC  209 (334)
Q Consensus       134 ~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  209 (334)
                           ...|+.+|...+.+++.+.    +.|++++++||+.+|++......  ....+.......+..         -..
T Consensus       153 -----~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~--~~~~~~~~~~~~~~~---------~~~  216 (247)
T PRK09730        153 -----YVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGG--EPGRVDRVKSNIPMQ---------RGG  216 (247)
T ss_pred             -----ccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCC--CHHHHHHHHhcCCCC---------CCc
Confidence                 1359999999998877654    35899999999999998532211  112222222121110         123


Q ss_pred             eHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          210 HVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       210 ~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +++|+++++..++...   ..|.++.+.|
T Consensus       217 ~~~dva~~~~~~~~~~~~~~~g~~~~~~g  245 (247)
T PRK09730        217 QPEEVAQAIVWLLSDKASYVTGSFIDLAG  245 (247)
T ss_pred             CHHHHHHHHHhhcChhhcCccCcEEecCC
Confidence            6899999999988754   3577777754

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.83  E-value=1.5e-19  Score=147.26  Aligned_cols=200  Identities=22%  Similarity=0.211  Sum_probs=145.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC---CCeEEEEcCCCChhhHHHHhc-------CCCEEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE---GALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih   71 (334)
                      .++||||++.||.++++.|.+.|++|++..|+.++...+...   ..+..+..|++|.+++.++++       ++|++||
T Consensus         8 v~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiLvN   87 (246)
T COG4221           8 VALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDILVN   87 (246)
T ss_pred             EEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccEEEe
Confidence            489999999999999999999999999999998876544332   257889999999988665553       5899999


Q ss_pred             eccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC---CCcEEEEecccceeccCCCccCCCCCccccccccChH
Q 019878           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (334)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y  142 (334)
                      +||.+..      ..++++.++++|+.|+.+..++.....   +..++|.+||...--..++              .+.|
T Consensus        88 NAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~--------------~~vY  153 (246)
T COG4221          88 NAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPG--------------GAVY  153 (246)
T ss_pred             cCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCC--------------Cccc
Confidence            9998432      234677899999999999999886552   2348999999764332222              2569


Q ss_pred             HHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCC--CCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHH
Q 019878          143 ERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGK--LTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVD  216 (334)
Q Consensus       143 ~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  216 (334)
                      +.||+....+...+.    ..+++++.+-||.+-...-  ....+ -......        ++    ....++..+|+|+
T Consensus       154 ~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g-~~~~~~~--------~y----~~~~~l~p~dIA~  220 (246)
T COG4221         154 GATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEG-DDERADK--------VY----KGGTALTPEDIAE  220 (246)
T ss_pred             hhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCc-hhhhHHH--------Hh----ccCCCCCHHHHHH
Confidence            999998877776654    3589999999998854310  00000 0000111        00    1224778999999


Q ss_pred             HHHHHhhcCCCC
Q 019878          217 GHIAAMEKGRSG  228 (334)
Q Consensus       217 a~~~~~~~~~~g  228 (334)
                      ++.+++..|..-
T Consensus       221 ~V~~~~~~P~~v  232 (246)
T COG4221         221 AVLFAATQPQHV  232 (246)
T ss_pred             HHHHHHhCCCcc
Confidence            999999998653

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1.1e-19  Score=156.39  Aligned_cols=188  Identities=22%  Similarity=0.288  Sum_probs=137.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CCCCCCeEEEEcCCCChhhHHHHhcC-------CCEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACFG-------CHVI   69 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~~-------~d~v   69 (334)
                      |+||||||+|+||.++++.|+++|++|++++|+.+....    +....++.++.+|++|.+++.+++++       +|++
T Consensus         3 ~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~l   82 (257)
T PRK07024          3 LKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDVV   82 (257)
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            479999999999999999999999999999997654321    11112688999999999988776643       7999


Q ss_pred             EEeccccCCC---C----CCcccchhhhhHHHHHHHHHH----HhcCCCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           70 FHTAALVEPW---L----PDPSRFFAVNVEGLKNVVQAA----KETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        70 ih~a~~~~~~---~----~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      ||+||.....   .    +++...+++|+.++.++++.+    ++. +.+++|++||...+.+.+.              
T Consensus        83 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~-~~~~iv~isS~~~~~~~~~--------------  147 (257)
T PRK07024         83 IANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAA-RRGTLVGIASVAGVRGLPG--------------  147 (257)
T ss_pred             EECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhc-CCCEEEEEechhhcCCCCC--------------
Confidence            9999974321   1    234567899999999988744    444 4578999998765432211              


Q ss_pred             cChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      ...|+.+|++.+.+.+.+.    ++|++++++||+.+.++....              ....        ...++..+|+
T Consensus       148 ~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~--------------~~~~--------~~~~~~~~~~  205 (257)
T PRK07024        148 AGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAH--------------NPYP--------MPFLMDADRF  205 (257)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhc--------------CCCC--------CCCccCHHHH
Confidence            2569999999998887753    458999999999998763210              0000        0013579999


Q ss_pred             HHHHHHHhhcC
Q 019878          215 VDGHIAAMEKG  225 (334)
Q Consensus       215 a~a~~~~~~~~  225 (334)
                      ++.+..++.+.
T Consensus       206 a~~~~~~l~~~  216 (257)
T PRK07024        206 AARAARAIARG  216 (257)
T ss_pred             HHHHHHHHhCC
Confidence            99999999763

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.82  E-value=2.1e-19  Score=155.80  Aligned_cols=204  Identities=18%  Similarity=0.168  Sum_probs=142.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CC-CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      |+||||||+|+||.++++.|+++|++|++++|+.++...    +. ...++.++.+|+.|.+++.++++       ++|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            789999999999999999999999999999998654321    11 11368889999999988877664       5899


Q ss_pred             EEEeccccCC--CC----CCcccchhhhhHHHHHHHHHH----HhcCCCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           69 IFHTAALVEP--WL----PDPSRFFAVNVEGLKNVVQAA----KETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        69 vih~a~~~~~--~~----~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      |||+||....  ..    ++.+..+++|+.++.++.+.+    .+. +..++|++||...+.+...              
T Consensus        81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~~--------------  145 (270)
T PRK05650         81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQ-KSGRIVNIASMAGLMQGPA--------------  145 (270)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-CCCEEEEECChhhcCCCCC--------------
Confidence            9999997432  11    123446789988887766664    444 4679999999876643321              


Q ss_pred             cChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCch---hHHHHHHHHHHcCCCCccccCCCCceeeeeH
Q 019878          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTG---NLVAKLMIERFNGRLPGYIGYGNDRFSFCHV  211 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  211 (334)
                      .+.|+.+|++.+.+.+.+.    ..|+++++++|+.+.++......   ...........             ...++++
T Consensus       146 ~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~  212 (270)
T PRK05650        146 MSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLL-------------EKSPITA  212 (270)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHh-------------hcCCCCH
Confidence            3679999998776666544    35899999999999877432111   00111111110             1235789


Q ss_pred             HHHHHHHHHHhhcCCCCCeEEecC
Q 019878          212 DDVVDGHIAAMEKGRSGERYLLTG  235 (334)
Q Consensus       212 ~D~a~a~~~~~~~~~~g~~~~i~g  235 (334)
                      +|+|+.++.++.+.   ..+.+.+
T Consensus       213 ~~vA~~i~~~l~~~---~~~~~~~  233 (270)
T PRK05650        213 ADIADYIYQQVAKG---EFLILPH  233 (270)
T ss_pred             HHHHHHHHHHHhCC---CEEEecC
Confidence            99999999999863   3455543

>PRK06398 aldose dehydrogenase; Validated

Probab=99.82  E-value=1.3e-18  Score=149.74  Aligned_cols=209  Identities=16%  Similarity=0.135  Sum_probs=145.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~a~   74 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.....      .+.++.+|++|.+++.++++       .+|+|||+||
T Consensus         8 ~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag   81 (258)
T PRK06398          8 VAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN------DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAG   81 (258)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccC------ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            5999999999999999999999999999999865421      58899999999988877664       4899999999


Q ss_pred             ccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChHHHH
Q 019878           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (334)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (334)
                      ....      ..+++...+++|+.++..+++++.+.   .+..++|++||...+.+..              ..+.|+.+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------~~~~Y~~s  147 (258)
T PRK06398         82 IESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTR--------------NAAAYVTS  147 (258)
T ss_pred             CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCC--------------CCchhhhh
Confidence            7321      11234456899999999998888653   2456999999987664322              13679999


Q ss_pred             HHHHHHHHHHHhhc---CCCEEEEecCceecCCCCCch----hHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHH
Q 019878          146 KAVADKIALQAASE---GLPIVPVYPGVIYGPGKLTTG----NLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGH  218 (334)
Q Consensus       146 K~~~E~~~~~~~~~---g~~~~ilR~~~v~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  218 (334)
                      |.+.+.+.+.+..+   ++++..++||.+-.+......    +.....+.+....     ++.......+..++|+++++
T Consensus       148 Kaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~eva~~~  222 (258)
T PRK06398        148 KHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIRE-----WGEMHPMKRVGKPEEVAYVV  222 (258)
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHh-----hhhcCCcCCCcCHHHHHHHH
Confidence            99999988876532   489999999988655210000    0000000000000     00111122466799999999


Q ss_pred             HHHhhcC---CCCCeEEecC
Q 019878          219 IAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       219 ~~~~~~~---~~g~~~~i~g  235 (334)
                      ..++...   ..|.++.+.|
T Consensus       223 ~~l~s~~~~~~~G~~i~~dg  242 (258)
T PRK06398        223 AFLASDLASFITGECVTVDG  242 (258)
T ss_pred             HHHcCcccCCCCCcEEEECC
Confidence            9988753   2577777753

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.82  E-value=4.8e-19  Score=152.27  Aligned_cols=211  Identities=19%  Similarity=0.189  Sum_probs=142.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~a~   74 (334)
                      +||||||+|+||.+++++|+++|++|++++|+..............++.+|++|.+++.++++       ++|+|||+||
T Consensus         9 ~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag   88 (255)
T PRK06057          9 VAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFNNAG   88 (255)
T ss_pred             EEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            699999999999999999999999999999986543221111123688999999998877775       4799999998


Q ss_pred             ccCCC--------CCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccc-eeccCCCccCCCCCccccccccChH
Q 019878           75 LVEPW--------LPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFF-ALGSTDGYIADENQVHEEKYFCTQY  142 (334)
Q Consensus        75 ~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~-v~~~~~~~~~~e~~~~~~~~~~~~Y  142 (334)
                      ...+.        ....+..+++|+.++..+++.+.+.   .+..++|++||.. +++....              ...|
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~--------------~~~Y  154 (255)
T PRK06057         89 ISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATS--------------QISY  154 (255)
T ss_pred             cCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCC--------------Ccch
Confidence            74321        1124567889999998888777531   1345899988853 4543211              2569


Q ss_pred             HHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHH
Q 019878          143 ERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGH  218 (334)
Q Consensus       143 ~~sK~~~E~~~~~----~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  218 (334)
                      +.+|++.+.+.+.    +...|++++++||+.+.++..............+.+.. .+        ...+..++|+++++
T Consensus       155 ~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~-~~--------~~~~~~~~~~a~~~  225 (255)
T PRK06057        155 TASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVH-VP--------MGRFAEPEEIAAAV  225 (255)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhc-CC--------CCCCcCHHHHHHHH
Confidence            9999876666554    44568999999999998874321100000111111111 01        12478899999999


Q ss_pred             HHHhhcC---CCCCeEEecC
Q 019878          219 IAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       219 ~~~~~~~---~~g~~~~i~g  235 (334)
                      ..++...   -.|..+.+.|
T Consensus       226 ~~l~~~~~~~~~g~~~~~~~  245 (255)
T PRK06057        226 AFLASDDASFITASTFLVDG  245 (255)
T ss_pred             HHHhCccccCccCcEEEECC
Confidence            8887643   2477777754

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.82  E-value=5.7e-19  Score=150.23  Aligned_cols=206  Identities=21%  Similarity=0.221  Sum_probs=145.4

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC-CC----CCCC-CCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-IS----GLPS-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         3 ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~----~~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      |||||++|+||+++++.|+++|++|++++|+... ..    .+.. ...+.++.+|++|.+++.++++       .+|+|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            6899999999999999999999999999987521 11    1111 1247899999999998877764       37999


Q ss_pred             EEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccc-eeccCCCccCCCCCcccccccc
Q 019878           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFF-ALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        70 ih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~-v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      ||+||....      ..++++..+++|+.++.++++.+.+.   .+.+++|++||.. .++...               .
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~---------------~  145 (239)
T TIGR01830        81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAG---------------Q  145 (239)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCC---------------C
Confidence            999997432      12334567889999999999998764   2456999999964 444221               2


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      +.|+.+|.+.+.+.+.+.    ..|++++++||+.+.++......   ........ +..+        ...+.+++|++
T Consensus       146 ~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~---~~~~~~~~-~~~~--------~~~~~~~~~~a  213 (239)
T TIGR01830       146 ANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLS---EKVKKKIL-SQIP--------LGRFGTPEEVA  213 (239)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcC---hHHHHHHH-hcCC--------cCCCcCHHHHH
Confidence            669999998888777654    34899999999988765321111   11111111 1111        12256799999


Q ss_pred             HHHHHHhhcC---CCCCeEEecC
Q 019878          216 DGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       216 ~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +++..++...   ..|++||+.+
T Consensus       214 ~~~~~~~~~~~~~~~g~~~~~~~  236 (239)
T TIGR01830       214 NAVAFLASDEASYITGQVIHVDG  236 (239)
T ss_pred             HHHHHHhCcccCCcCCCEEEeCC
Confidence            9999888543   2588999964

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07985 oxidoreductase; Provisional

Probab=99.81  E-value=1.2e-18  Score=152.72  Aligned_cols=210  Identities=19%  Similarity=0.148  Sum_probs=147.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC--CCCC----C-CCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI--SGLP----S-EGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~----~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      ++|||||+|+||.++++.|+++|++|++.+|+....  +.+.    . ..++.++.+|++|.+++.++++       ++|
T Consensus        51 ~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id  130 (294)
T PRK07985         51 KALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGGLD  130 (294)
T ss_pred             EEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            599999999999999999999999999887654321  1110    0 1257789999999988766653       479


Q ss_pred             EEEEeccccCC-------CCCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           68 VIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        68 ~vih~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      ++||+||....       ..+++...+++|+.++..+++++.+.. ...++|++||...+.....              .
T Consensus       131 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~--------------~  196 (294)
T PRK07985        131 IMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPH--------------L  196 (294)
T ss_pred             EEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCC--------------c
Confidence            99999986321       123456688999999999999998642 1258999999887754322              2


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      ..|+.+|.+.+.+.+.+.    ++|+++.+++|+.++++...... .......... ...+        ...+...+|++
T Consensus       197 ~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~-~~~~~~~~~~-~~~~--------~~r~~~pedva  266 (294)
T PRK07985        197 LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGG-QTQDKIPQFG-QQTP--------MKRAGQPAELA  266 (294)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccC-CCHHHHHHHh-ccCC--------CCCCCCHHHHH
Confidence            569999999888877654    35999999999999988421100 0011111111 1111        12356799999


Q ss_pred             HHHHHHhhcCC---CCCeEEecC
Q 019878          216 DGHIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       216 ~a~~~~~~~~~---~g~~~~i~g  235 (334)
                      +++..++....   .|.++.+.|
T Consensus       267 ~~~~fL~s~~~~~itG~~i~vdg  289 (294)
T PRK07985        267 PVYVYLASQESSYVTAEVHGVCG  289 (294)
T ss_pred             HHHHhhhChhcCCccccEEeeCC
Confidence            99999987543   578888854

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.3e-18  Score=149.28  Aligned_cols=207  Identities=18%  Similarity=0.131  Sum_probs=146.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~a~   74 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+.+...   ....+.++.+|+.|.+++.++++       ++|+|||+||
T Consensus         8 ~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag   84 (252)
T PRK07856          8 VVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPETV---DGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNAG   84 (252)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhhh---cCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            5999999999999999999999999999999875411   11368899999999988877764       3699999999


Q ss_pred             ccCC------CCCCcccchhhhhHHHHHHHHHHHhc----CCCcEEEEecccceeccCCCccCCCCCccccccccChHHH
Q 019878           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (334)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (334)
                      ....      ..+++...+++|+.++..+++++...    ....++|++||...+.+...              .+.|+.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~--------------~~~Y~~  150 (252)
T PRK07856         85 GSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPG--------------TAAYGA  150 (252)
T ss_pred             CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCC--------------CchhHH
Confidence            6322      11234567899999999999988652    12358999999766543221              367999


Q ss_pred             HHHHHHHHHHHHhhc---CCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHH
Q 019878          145 SKAVADKIALQAASE---GLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAA  221 (334)
Q Consensus       145 sK~~~E~~~~~~~~~---g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~  221 (334)
                      +|.+.+.+.+.+..+   .+++..++|+.+..+........ ...... .....+        ...+...+|+++++..+
T Consensus       151 sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~-~~~~~~-~~~~~~--------~~~~~~p~~va~~~~~L  220 (252)
T PRK07856        151 AKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGD-AEGIAA-VAATVP--------LGRLATPADIAWACLFL  220 (252)
T ss_pred             HHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccC-HHHHHH-HhhcCC--------CCCCcCHHHHHHHHHHH
Confidence            999999988876531   38899999999977632110000 011111 111111        12356789999999998


Q ss_pred             hhcC---CCCCeEEecC
Q 019878          222 MEKG---RSGERYLLTG  235 (334)
Q Consensus       222 ~~~~---~~g~~~~i~g  235 (334)
                      +...   ..|..+.+.|
T Consensus       221 ~~~~~~~i~G~~i~vdg  237 (252)
T PRK07856        221 ASDLASYVSGANLEVHG  237 (252)
T ss_pred             cCcccCCccCCEEEECC
Confidence            8653   2588888853

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.81  E-value=2e-19  Score=154.66  Aligned_cols=208  Identities=18%  Similarity=0.167  Sum_probs=147.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC---CCCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS---GLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih   71 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.....   .+. ...+.++.+|+++.+++.++++       ++|+|||
T Consensus        17 ~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~   95 (255)
T PRK06841         17 VAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLL-GGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDILVN   95 (255)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhh-CCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence            6999999999999999999999999999999764211   111 1256789999999998877664       4799999


Q ss_pred             eccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChH
Q 019878           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (334)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y  142 (334)
                      +||....      ..++....+++|+.++.++++++.+.   .+.+++|++||.....+...              ...|
T Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~~~Y  161 (255)
T PRK06841         96 SAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALER--------------HVAY  161 (255)
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCC--------------CchH
Confidence            9997432      11234457899999999999998753   23569999999764322211              2569


Q ss_pred             HHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHH
Q 019878          143 ERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGH  218 (334)
Q Consensus       143 ~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  218 (334)
                      +.+|.+.+.+.+.+.    ++|+++..++|+.+..+.....   .............        ....+.+++|+++++
T Consensus       162 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~---~~~~~~~~~~~~~--------~~~~~~~~~~va~~~  230 (255)
T PRK06841        162 CASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKA---WAGEKGERAKKLI--------PAGRFAYPEEIAAAA  230 (255)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccc---cchhHHHHHHhcC--------CCCCCcCHHHHHHHH
Confidence            999999888777654    3589999999999987642110   0000011111111        123478999999999


Q ss_pred             HHHhhcC---CCCCeEEecC
Q 019878          219 IAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       219 ~~~~~~~---~~g~~~~i~g  235 (334)
                      +.++...   ..|.++.+.|
T Consensus       231 ~~l~~~~~~~~~G~~i~~dg  250 (255)
T PRK06841        231 LFLASDAAAMITGENLVIDG  250 (255)
T ss_pred             HHHcCccccCccCCEEEECC
Confidence            9998754   2588888854

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.81  E-value=9.8e-19  Score=149.71  Aligned_cols=210  Identities=16%  Similarity=0.171  Sum_probs=147.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC--CCCCC-CCCeEEEEcCCCChhhHHHHhc-------CCCEEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI--SGLPS-EGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih   71 (334)
                      ++|||||+|+||.+++++|+++|++|++++|+....  ..+.. ..++.++.+|+++.+++..+++       ++|+|||
T Consensus         7 ~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~   86 (248)
T TIGR01832         7 VALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDILVN   86 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            699999999999999999999999999999865211  01111 1258899999999988876553       4899999


Q ss_pred             eccccCCC------CCCcccchhhhhHHHHHHHHHHHhc---CC-CcEEEEecccceeccCCCccCCCCCccccccccCh
Q 019878           72 TAALVEPW------LPDPSRFFAVNVEGLKNVVQAAKET---KT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (334)
Q Consensus        72 ~a~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  141 (334)
                      +||.....      ..+++..+++|+.++.++++++.+.   .+ ..++|++||...+.+...              ...
T Consensus        87 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--------------~~~  152 (248)
T TIGR01832        87 NAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIR--------------VPS  152 (248)
T ss_pred             CCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCC--------------Cch
Confidence            99974321      1234567889999999999988643   12 458999999877754321              245


Q ss_pred             HHHHHHHHHHHHHHHhh----cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHH
Q 019878          142 YERSKAVADKIALQAAS----EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDG  217 (334)
Q Consensus       142 Y~~sK~~~E~~~~~~~~----~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  217 (334)
                      |+.+|.+.+.+.+.+..    +|++++.++||.+..+.......  ............        ..+.|+..+|+|++
T Consensus       153 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~--------~~~~~~~~~dva~~  222 (248)
T TIGR01832       153 YTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRA--DEDRNAAILERI--------PAGRWGTPDDIGGP  222 (248)
T ss_pred             hHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhcccc--ChHHHHHHHhcC--------CCCCCcCHHHHHHH
Confidence            99999999988887653    48999999999998764211000  000001111111        12358899999999


Q ss_pred             HHHHhhcCC---CCCeEEecC
Q 019878          218 HIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       218 ~~~~~~~~~---~g~~~~i~g  235 (334)
                      +..++....   .|.++.+.|
T Consensus       223 ~~~l~s~~~~~~~G~~i~~dg  243 (248)
T TIGR01832       223 AVFLASSASDYVNGYTLAVDG  243 (248)
T ss_pred             HHHHcCccccCcCCcEEEeCC
Confidence            999987532   477766654

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06196 oxidoreductase; Provisional

Probab=99.81  E-value=7e-19  Score=155.90  Aligned_cols=213  Identities=18%  Similarity=0.110  Sum_probs=139.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-CCCCeEEEEcCCCChhhHHHHhc-------CCCEEEEec
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-SEGALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~a   73 (334)
                      +||||||+|+||.++++.|+++|++|++++|+.++..... ....+.++.+|++|.+++.++++       ++|+|||+|
T Consensus        28 ~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nA  107 (315)
T PRK06196         28 TAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILINNA  107 (315)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEEECC
Confidence            5999999999999999999999999999999865432211 11247899999999998877663       489999999


Q ss_pred             cccCC----CCCCcccchhhhhHHHHHHHHHH----HhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHH
Q 019878           74 ALVEP----WLPDPSRFFAVNVEGLKNVVQAA----KETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (334)
Q Consensus        74 ~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (334)
                      |....    ..+..+..+++|+.++..+.+.+    ++. +..++|++||........  ..++.....+..+...|+.|
T Consensus       108 g~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~vSS~~~~~~~~--~~~~~~~~~~~~~~~~Y~~S  184 (315)
T PRK06196        108 GVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAG-AGARVVALSSAGHRRSPI--RWDDPHFTRGYDKWLAYGQS  184 (315)
T ss_pred             CCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCeEEEECCHHhccCCC--CccccCccCCCChHHHHHHH
Confidence            97432    12234567889999976666654    443 346999999975432211  11111111111234679999


Q ss_pred             HHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHH-cCCCCccccCCCCceeeeeHHHHHHHHHH
Q 019878          146 KAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERF-NGRLPGYIGYGNDRFSFCHVDDVVDGHIA  220 (334)
Q Consensus       146 K~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~a~~~  220 (334)
                      |.+.+.+.+.+.    ++|++++++|||.+.++........ ...-.... ....+ + .     ..+..++|.|.+++.
T Consensus       185 K~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~-~-~-----~~~~~~~~~a~~~~~  256 (315)
T PRK06196        185 KTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPRE-EQVALGWVDEHGNP-I-D-----PGFKTPAQGAATQVW  256 (315)
T ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChh-hhhhhhhhhhhhhh-h-h-----hhcCCHhHHHHHHHH
Confidence            999998877654    3589999999999998853221110 00000000 00000 0 0     024568999999999


Q ss_pred             HhhcC
Q 019878          221 AMEKG  225 (334)
Q Consensus       221 ~~~~~  225 (334)
                      ++..+
T Consensus       257 l~~~~  261 (315)
T PRK06196        257 AATSP  261 (315)
T ss_pred             HhcCC
Confidence            88654

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.81  E-value=3.9e-19  Score=151.55  Aligned_cols=195  Identities=19%  Similarity=0.160  Sum_probs=141.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC----C-CCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||+|+||..+++.|+++|++|++++|++++...+.    . ..++.++.+|++|.+.+.++++       ++|+|
T Consensus         8 ~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   87 (241)
T PRK07454          8 RALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCPDVL   87 (241)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5999999999999999999999999999999865432211    0 1268899999999998877664       48999


Q ss_pred             EEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        70 ih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      ||+||....      ..++....+++|+.++.++++.+.+.   .+.+++|++||...+++...              ..
T Consensus        88 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~~  153 (241)
T PRK07454         88 INNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQ--------------WG  153 (241)
T ss_pred             EECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCC--------------cc
Confidence            999997322      11234557889999988888776432   13568999999887754321              36


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHH
Q 019878          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVD  216 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  216 (334)
                      .|+.+|.+.+.+.+.+.    +.|++++++||+.+-.+.... ..     .       .. ..    ....++..+|+|+
T Consensus       154 ~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~-~~-----~-------~~-~~----~~~~~~~~~~va~  215 (241)
T PRK07454        154 AYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDT-ET-----V-------QA-DF----DRSAMLSPEQVAQ  215 (241)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccc-cc-----c-------cc-cc----ccccCCCHHHHHH
Confidence            79999999998877653    358999999999987763211 00     0       00 00    0113578999999


Q ss_pred             HHHHHhhcCCCC
Q 019878          217 GHIAAMEKGRSG  228 (334)
Q Consensus       217 a~~~~~~~~~~g  228 (334)
                      ++..++..+...
T Consensus       216 ~~~~l~~~~~~~  227 (241)
T PRK07454        216 TILHLAQLPPSA  227 (241)
T ss_pred             HHHHHHcCCccc
Confidence            999999877543

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.81  E-value=3.4e-19  Score=153.37  Aligned_cols=157  Identities=26%  Similarity=0.300  Sum_probs=117.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEcCCCChhhHHHHhc-CCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-GCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~-~~d~vih~a~~   75 (334)
                      +||||||+|+||+++++.|+++|++|++++|++++...+.     ...++.++.+|+.|.+.+.+++. ++|+|||+||.
T Consensus         4 ~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~ag~   83 (257)
T PRK09291          4 TILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNAGI   83 (257)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECCCc
Confidence            6999999999999999999999999999999764322110     01257889999999999988887 69999999997


Q ss_pred             cCCC------CCCcccchhhhhHHHHHHHHHH----HhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHH
Q 019878           76 VEPW------LPDPSRFFAVNVEGLKNVVQAA----KETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (334)
Q Consensus        76 ~~~~------~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (334)
                      ....      .......+++|+.++.++.+.+    .+. +.+++|++||...+....              ....|+.+
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~SS~~~~~~~~--------------~~~~Y~~s  148 (257)
T PRK09291         84 GEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVAR-GKGKVVFTSSMAGLITGP--------------FTGAYCAS  148 (257)
T ss_pred             CCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEcChhhccCCC--------------CcchhHHH
Confidence            4321      1123456788998877766554    344 457999999975443211              13669999


Q ss_pred             HHHHHHHHHHHh----hcCCCEEEEecCceec
Q 019878          146 KAVADKIALQAA----SEGLPIVPVYPGVIYG  173 (334)
Q Consensus       146 K~~~E~~~~~~~----~~g~~~~ilR~~~v~G  173 (334)
                      |.+.|.+.+.+.    ..|++++++||+.+..
T Consensus       149 K~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t  180 (257)
T PRK09291        149 KHALEAIAEAMHAELKPFGIQVATVNPGPYLT  180 (257)
T ss_pred             HHHHHHHHHHHHHHHHhcCcEEEEEecCcccc
Confidence            999998877654    3599999999997743

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.81  E-value=5.2e-19  Score=151.08  Aligned_cols=209  Identities=18%  Similarity=0.204  Sum_probs=144.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      ++|||||+|+||+++++.|+++|+.|++.+|+.++...+..  ..+++++.+|++|.+++.++++       ++|+|||+
T Consensus         8 ~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~   87 (245)
T PRK12936          8 KALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDILVNN   87 (245)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            69999999999999999999999999888887654322111  1258889999999988877653       58999999


Q ss_pred             ccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChHH
Q 019878           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (334)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (334)
                      ||....      ..+++...+++|+.++.++++++.+.   ...+++|++||...+...+.              ...|+
T Consensus        88 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~~~Y~  153 (245)
T PRK12936         88 AGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPG--------------QANYC  153 (245)
T ss_pred             CCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCC--------------CcchH
Confidence            997432      12345567899999999998887532   24568999999754432221              25599


Q ss_pred             HHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHH
Q 019878          144 RSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHI  219 (334)
Q Consensus       144 ~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  219 (334)
                      .+|.+.+.+.+.+.    ..|+++++++|+.+..+.....    .........+..        ....+...+|+++++.
T Consensus       154 ~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~----~~~~~~~~~~~~--------~~~~~~~~~~ia~~~~  221 (245)
T PRK12936        154 ASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKL----NDKQKEAIMGAI--------PMKRMGTGAEVASAVA  221 (245)
T ss_pred             HHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhccc----ChHHHHHHhcCC--------CCCCCcCHHHHHHHHH
Confidence            99997777766543    3589999999998865532111    011111111111        1123567999999998


Q ss_pred             HHhhcCC---CCCeEEecCC
Q 019878          220 AAMEKGR---SGERYLLTGE  236 (334)
Q Consensus       220 ~~~~~~~---~g~~~~i~g~  236 (334)
                      .++....   .|+++++.+.
T Consensus       222 ~l~~~~~~~~~G~~~~~~~g  241 (245)
T PRK12936        222 YLASSEAAYVTGQTIHVNGG  241 (245)
T ss_pred             HHcCccccCcCCCEEEECCC
Confidence            8876532   5889998643

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.81  E-value=3.5e-19  Score=150.76  Aligned_cols=208  Identities=21%  Similarity=0.211  Sum_probs=148.1

Q ss_pred             EEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CCCCCCeEEEEcCCCChhhHHHHhcC---CCEEEEecccc
Q 019878            4 LVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACFG---CHVIFHTAALV   76 (334)
Q Consensus         4 lItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~~---~d~vih~a~~~   76 (334)
                      |||||+|+||+++++.|+++|++|++++|+++....    +....+++++.+|++|.+++.++++.   +|++||+||..
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~   80 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT   80 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence            699999999999999999999999999998543221    11113688999999999999888864   79999999974


Q ss_pred             CC------CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHH
Q 019878           77 EP------WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD  150 (334)
Q Consensus        77 ~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E  150 (334)
                      ..      ..++....+++|+.++.+++++.... ..+++|++||...+...+.              .+.|+.+|.+.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~g~iv~~ss~~~~~~~~~--------------~~~Y~~sK~a~~  145 (230)
T PRK07041         81 PGGPVRALPLAAAQAAMDSKFWGAYRVARAARIA-PGGSLTFVSGFAAVRPSAS--------------GVLQGAINAALE  145 (230)
T ss_pred             CCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhc-CCeEEEEECchhhcCCCCc--------------chHHHHHHHHHH
Confidence            32      12245567899999999999966554 5679999999887754321              367999999999


Q ss_pred             HHHHHHhhc--CCCEEEEecCceecCCCCCc-hhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC-
Q 019878          151 KIALQAASE--GLPIVPVYPGVIYGPGKLTT-GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR-  226 (334)
Q Consensus       151 ~~~~~~~~~--g~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-  226 (334)
                      .+.+.+..+  +++++.++|+.+-.+..... .......+..... ..+        ...+...+|+++++..++.... 
T Consensus       146 ~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~-~~~--------~~~~~~~~dva~~~~~l~~~~~~  216 (230)
T PRK07041        146 ALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAE-RLP--------ARRVGQPEDVANAILFLAANGFT  216 (230)
T ss_pred             HHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHh-cCC--------CCCCcCHHHHHHHHHHHhcCCCc
Confidence            998887642  68899999998765421100 0000111111111 111        1124468999999999998653 


Q ss_pred             CCCeEEecC
Q 019878          227 SGERYLLTG  235 (334)
Q Consensus       227 ~g~~~~i~g  235 (334)
                      .|++|++.|
T Consensus       217 ~G~~~~v~g  225 (230)
T PRK07041        217 TGSTVLVDG  225 (230)
T ss_pred             CCcEEEeCC
Confidence            588999864

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.81  E-value=7.5e-19  Score=150.79  Aligned_cols=208  Identities=16%  Similarity=0.162  Sum_probs=147.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CC-CCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.++....    .. ..++.++.+|+.+.+++.++++       .+|+|
T Consensus         7 ~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   86 (253)
T PRK08217          7 VIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLNGL   86 (253)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            599999999999999999999999999999986432211    11 1257889999999888766554       37999


Q ss_pred             EEeccccCCC---------------CCCcccchhhhhHHHHHHHHHHHhc----CCCcEEEEecccceeccCCCccCCCC
Q 019878           70 FHTAALVEPW---------------LPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADEN  130 (334)
Q Consensus        70 ih~a~~~~~~---------------~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~e~  130 (334)
                      ||+||.....               .++....+++|+.++..+++.+.+.    ....++|++||...|+...       
T Consensus        87 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~-------  159 (253)
T PRK08217         87 INNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNMG-------  159 (253)
T ss_pred             EECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCCC-------
Confidence            9999963311               1123346789999998777655432    1224799999987665421       


Q ss_pred             CccccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCce
Q 019878          131 QVHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRF  206 (334)
Q Consensus       131 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (334)
                              .+.|+.+|.+.+.+++.+.    ++|++++.++|+.+.++....   ..+..........         ..+
T Consensus       160 --------~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~---~~~~~~~~~~~~~---------~~~  219 (253)
T PRK08217        160 --------QTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAA---MKPEALERLEKMI---------PVG  219 (253)
T ss_pred             --------CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccc---cCHHHHHHHHhcC---------CcC
Confidence                    3669999999999888765    358999999999998875321   1122222222221         122


Q ss_pred             eeeeHHHHHHHHHHHhhcCC-CCCeEEecCC
Q 019878          207 SFCHVDDVVDGHIAAMEKGR-SGERYLLTGE  236 (334)
Q Consensus       207 ~~i~v~D~a~a~~~~~~~~~-~g~~~~i~g~  236 (334)
                      .+.+++|+++++..++.... .|+++++.|.
T Consensus       220 ~~~~~~~~a~~~~~l~~~~~~~g~~~~~~gg  250 (253)
T PRK08217        220 RLGEPEEIAHTVRFIIENDYVTGRVLEIDGG  250 (253)
T ss_pred             CCcCHHHHHHHHHHHHcCCCcCCcEEEeCCC
Confidence            46689999999999987643 6889998753

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.81  E-value=8.7e-19  Score=151.37  Aligned_cols=211  Identities=16%  Similarity=0.156  Sum_probs=146.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      +++|||||+|+||.++++.|+++|++|++++|++++...+.     ...++.++.+|+++.+++.++++       ++|+
T Consensus        11 ~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   90 (263)
T PRK07814         11 QVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRLDI   90 (263)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            46999999999999999999999999999999865432211     01257889999999998877664       5899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc----CCCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      |||+||....      ..+++...+++|+.++.++++++.+.    .+.+++|++||........              +
T Consensus        91 vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~--------------~  156 (263)
T PRK07814         91 VVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGR--------------G  156 (263)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCC--------------C
Confidence            9999986322      12335568899999999999999752    2456899999964332111              1


Q ss_pred             cChHHHHHHHHHHHHHHHhh---cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          139 CTQYERSKAVADKIALQAAS---EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~~---~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      .+.|+.+|.+.+.+.+.+..   .+++++.++|+.+..+....... -.. +.....+..+        ...+..++|++
T Consensus       157 ~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~-~~~-~~~~~~~~~~--------~~~~~~~~~va  226 (263)
T PRK07814        157 FAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAA-NDE-LRAPMEKATP--------LRRLGDPEDIA  226 (263)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccC-CHH-HHHHHHhcCC--------CCCCcCHHHHH
Confidence            36799999999998888663   25889999999886552110000 001 1111112111        11245789999


Q ss_pred             HHHHHHhhcC---CCCCeEEecC
Q 019878          216 DGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       216 ~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      ++++.++...   ..|..+.+.+
T Consensus       227 ~~~~~l~~~~~~~~~g~~~~~~~  249 (263)
T PRK07814        227 AAAVYLASPAGSYLTGKTLEVDG  249 (263)
T ss_pred             HHHHHHcCccccCcCCCEEEECC
Confidence            9999998653   3577777754

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.81  E-value=2.5e-18  Score=146.88  Aligned_cols=207  Identities=21%  Similarity=0.224  Sum_probs=146.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC-CCC----CC-CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~----~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+... ...    .. ...++.++.+|+.|.+.+.++++       ++|+
T Consensus         4 ~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~   83 (245)
T PRK12824          4 IALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVDI   83 (245)
T ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            69999999999999999999999999999998531 000    00 11258899999999988777664       4899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHH----HhcCCCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAA----KETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      |||+||....      ..++++..++.|+.++.++.+.+    ++. +.+++|++||...+.+...              
T Consensus        84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~iss~~~~~~~~~--------------  148 (245)
T PRK12824         84 LVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ-GYGRIINISSVNGLKGQFG--------------  148 (245)
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-CCeEEEEECChhhccCCCC--------------
Confidence            9999997421      12234567889999999886555    444 4679999999876644321              


Q ss_pred             cChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      ...|+.+|.+.+.+.+.+.    +.|+++++++|+.+.++.......   ....... ...        ....+..++|+
T Consensus       149 ~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~---~~~~~~~-~~~--------~~~~~~~~~~v  216 (245)
T PRK12824        149 QTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGP---EVLQSIV-NQI--------PMKRLGTPEEI  216 (245)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCH---HHHHHHH-hcC--------CCCCCCCHHHH
Confidence            2569999998888777754    458999999999998874321111   1111111 111        12235568999


Q ss_pred             HHHHHHHhhcC---CCCCeEEecC
Q 019878          215 VDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       215 a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      ++++..++...   -.|+.+++.|
T Consensus       217 a~~~~~l~~~~~~~~~G~~~~~~~  240 (245)
T PRK12824        217 AAAVAFLVSEAAGFITGETISING  240 (245)
T ss_pred             HHHHHHHcCccccCccCcEEEECC
Confidence            99998888653   2588998864

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.81  E-value=1.2e-18  Score=149.82  Aligned_cols=212  Identities=16%  Similarity=0.159  Sum_probs=143.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC-CCCCCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      ++++||||+|+||.++++.|+++|++|+++.++... ...+.. .++.++.+|++|.+++.++++       ++|+|||+
T Consensus         8 k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~   86 (255)
T PRK06463          8 KVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELRE-KGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNN   86 (255)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHh-CCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            369999999999999999999999999988765432 112222 157889999999998877764       48999999


Q ss_pred             ccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChHH
Q 019878           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (334)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (334)
                      ||....      ..++++..+++|+.++..+.+.+.+.   .+..++|++||...++...             ...+.|+
T Consensus        87 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~-------------~~~~~Y~  153 (255)
T PRK06463         87 AGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAA-------------EGTTFYA  153 (255)
T ss_pred             CCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCC-------------CCccHhH
Confidence            987421      11234567899999976655554332   1356999999987764221             0125699


Q ss_pred             HHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCc--hhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHH
Q 019878          144 RSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTT--GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDG  217 (334)
Q Consensus       144 ~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  217 (334)
                      .+|.+.+.+.+.+.    .+|+++..++|+.+-.+.....  ...... +........        ..+.+...+|++++
T Consensus       154 asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~-~~~~~~~~~--------~~~~~~~~~~va~~  224 (255)
T PRK06463        154 ITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEK-LRELFRNKT--------VLKTTGKPEDIANI  224 (255)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHH-HHHHHHhCC--------CcCCCcCHHHHHHH
Confidence            99999988887765    3589999999998865421100  000001 111111111        12335679999999


Q ss_pred             HHHHhhcC---CCCCeEEecC
Q 019878          218 HIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       218 ~~~~~~~~---~~g~~~~i~g  235 (334)
                      +..++...   ..|.++.+.|
T Consensus       225 ~~~l~s~~~~~~~G~~~~~dg  245 (255)
T PRK06463        225 VLFLASDDARYITGQVIVADG  245 (255)
T ss_pred             HHHHcChhhcCCCCCEEEECC
Confidence            99998754   2588888854

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.81  E-value=4e-19  Score=154.33  Aligned_cols=191  Identities=19%  Similarity=0.130  Sum_probs=137.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-CCCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      +++|||||+|.||+++++.|+++|++|++++|++++...+.. ...+.++.+|++|.+++.++++       ++|++||+
T Consensus         6 ~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~   85 (273)
T PRK07825          6 KVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVNN   85 (273)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            369999999999999999999999999999998754332211 1147889999999988766553       47999999


Q ss_pred             ccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChHH
Q 019878           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (334)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (334)
                      ||....      ..++....+++|+.++.++++.+.+.   .+.+++|++||...+.+.+.              .+.|+
T Consensus        86 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~  151 (273)
T PRK07825         86 AGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPG--------------MATYC  151 (273)
T ss_pred             CCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCC--------------CcchH
Confidence            997432      11123457889999988888777543   24568999999766543221              36699


Q ss_pred             HHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHH
Q 019878          144 RSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHI  219 (334)
Q Consensus       144 ~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  219 (334)
                      .+|...+.+.+.+    .+.|+++++++|+.+-.+...               +. .     ......++.++|+|+++.
T Consensus       152 asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~---------------~~-~-----~~~~~~~~~~~~va~~~~  210 (273)
T PRK07825        152 ASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIA---------------GT-G-----GAKGFKNVEPEDVAAAIV  210 (273)
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhc---------------cc-c-----cccCCCCCCHHHHHHHHH
Confidence            9999777665554    345999999999988544210               00 0     011224788999999999


Q ss_pred             HHhhcCC
Q 019878          220 AAMEKGR  226 (334)
Q Consensus       220 ~~~~~~~  226 (334)
                      .++.++.
T Consensus       211 ~~l~~~~  217 (273)
T PRK07825        211 GTVAKPR  217 (273)
T ss_pred             HHHhCCC
Confidence            9998753

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.81  E-value=5.3e-19  Score=150.53  Aligned_cols=191  Identities=16%  Similarity=0.199  Sum_probs=140.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----C-CCCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      +++||||+|+||.+++++|+++|++|++++|++.+...+    . ...++.++.+|+++.+++.++++       ++|+|
T Consensus         9 ~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   88 (239)
T PRK07666          9 NALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSIDIL   88 (239)
T ss_pred             EEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCccEE
Confidence            599999999999999999999999999999986532211    1 01258889999999998877775       58999


Q ss_pred             EEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        70 ih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      ||+||....      ..++....++.|+.++.++++.+.+.   .+.+++|++||...+.+...              ..
T Consensus        89 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~--------------~~  154 (239)
T PRK07666         89 INNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAV--------------TS  154 (239)
T ss_pred             EEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCC--------------Cc
Confidence            999987322      11223567899999999998888642   24568999999765543221              25


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHH
Q 019878          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVD  216 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  216 (334)
                      .|+.+|.+.+.+.+.+.    +.|++++++||+.+.++.....          .....         ....++..+|+++
T Consensus       155 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~----------~~~~~---------~~~~~~~~~~~a~  215 (239)
T PRK07666        155 AYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDL----------GLTDG---------NPDKVMQPEDLAE  215 (239)
T ss_pred             chHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhc----------ccccc---------CCCCCCCHHHHHH
Confidence            69999998888877654    4589999999999987632100          00111         1123577999999


Q ss_pred             HHHHHhhcC
Q 019878          217 GHIAAMEKG  225 (334)
Q Consensus       217 a~~~~~~~~  225 (334)
                      ++..++..+
T Consensus       216 ~~~~~l~~~  224 (239)
T PRK07666        216 FIVAQLKLN  224 (239)
T ss_pred             HHHHHHhCC
Confidence            999999875

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.80  E-value=7.6e-19  Score=149.35  Aligned_cols=197  Identities=18%  Similarity=0.137  Sum_probs=141.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vi   70 (334)
                      +|+||||+|+||++++++|+++|++|++++|++.+...    +.....+.++.+|+.|.+++.+.++       ++|+||
T Consensus         8 ~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   87 (237)
T PRK07326          8 VALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLDVLI   87 (237)
T ss_pred             EEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            59999999999999999999999999999998654321    1111368899999999988877665       589999


Q ss_pred             EeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc--CCCcEEEEecccceeccCCCccCCCCCccccccccChH
Q 019878           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET--KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (334)
Q Consensus        71 h~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y  142 (334)
                      |+|+....      ..++....+++|+.++..+++++.+.  .+.+++|++||...+....              ....|
T Consensus        88 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~--------------~~~~y  153 (237)
T PRK07326         88 ANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFA--------------GGAAY  153 (237)
T ss_pred             ECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCC--------------CCchH
Confidence            99986432      11223457889999999998888753  1346899999976543221              12569


Q ss_pred             HHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHH
Q 019878          143 ERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGH  218 (334)
Q Consensus       143 ~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  218 (334)
                      +.+|++.+.+.+.+.    ..|++++++||+.+.++......            ..         .....+..+|+++++
T Consensus       154 ~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~------------~~---------~~~~~~~~~d~a~~~  212 (237)
T PRK07326        154 NASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTP------------SE---------KDAWKIQPEDIAQLV  212 (237)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCccccccc------------ch---------hhhccCCHHHHHHHH
Confidence            999998888777753    35899999999999775321100            00         000136789999999


Q ss_pred             HHHhhcCCC--CCeEEe
Q 019878          219 IAAMEKGRS--GERYLL  233 (334)
Q Consensus       219 ~~~~~~~~~--g~~~~i  233 (334)
                      ..++..+..  .....+
T Consensus       213 ~~~l~~~~~~~~~~~~~  229 (237)
T PRK07326        213 LDLLKMPPRTLPSKIEV  229 (237)
T ss_pred             HHHHhCCccccccceEE
Confidence            999987642  334444

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.80  E-value=2.4e-18  Score=147.01  Aligned_cols=209  Identities=19%  Similarity=0.165  Sum_probs=145.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC-C----CCC-CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-S----GLP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~----~~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+|+||+++++.|+++|++|+++.|+.... .    .+. ...++.++.+|++|.+++.++++       ++|+
T Consensus         7 ~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   86 (245)
T PRK12937          7 VAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGRIDV   86 (245)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            599999999999999999999999998887754321 0    010 11258899999999998877775       5899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCccccccccCh
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  141 (334)
                      |||+||....      ..++.+..++.|+.++.++++++.+.. ...++|++||...+.+.+              ..+.
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~--------------~~~~  152 (245)
T PRK12937         87 LVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLP--------------GYGP  152 (245)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCC--------------CCch
Confidence            9999997432      112345678899999999999887652 224899999876543221              1367


Q ss_pred             HHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHH
Q 019878          142 YERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDG  217 (334)
Q Consensus       142 Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  217 (334)
                      |+.+|.+.+.+++.+.    ..|++++.++|+.+-.+......  ........... .+        ...+.+++|++++
T Consensus       153 Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~--~~~~~~~~~~~-~~--------~~~~~~~~d~a~~  221 (245)
T PRK12937        153 YAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGK--SAEQIDQLAGL-AP--------LERLGTPEEIAAA  221 (245)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccC--CHHHHHHHHhc-CC--------CCCCCCHHHHHHH
Confidence            9999999999888764    34899999999988765311000  11122222111 11        1124578999999


Q ss_pred             HHHHhhcCC---CCCeEEecC
Q 019878          218 HIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       218 ~~~~~~~~~---~g~~~~i~g  235 (334)
                      +..++..+.   .|+++++.|
T Consensus       222 ~~~l~~~~~~~~~g~~~~~~~  242 (245)
T PRK12937        222 VAFLAGPDGAWVNGQVLRVNG  242 (245)
T ss_pred             HHHHcCccccCccccEEEeCC
Confidence            999887542   478888864

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.80  E-value=4.9e-19  Score=148.39  Aligned_cols=194  Identities=22%  Similarity=0.265  Sum_probs=143.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC------CCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE------GALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      +++|||||+.||..+++.|+++|++|+.+.|+.++...+...      -.+.++.+|+++++++..+..       .+|+
T Consensus         8 ~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~Idv   87 (265)
T COG0300           8 TALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGGPIDV   87 (265)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCCcccE
Confidence            599999999999999999999999999999999865543222      247899999999998877663       4999


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      +||+||....      ..++...++++|+.++..|..+....   ++-.++|.++|...+-+.+.              .
T Consensus        88 LVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~--------------~  153 (265)
T COG0300          88 LVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPY--------------M  153 (265)
T ss_pred             EEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcc--------------h
Confidence            9999998432      22334568999999988887776554   13458999999888765542              3


Q ss_pred             ChHHHHHHHH----HHHHHHHhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          140 TQYERSKAVA----DKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       140 ~~Y~~sK~~~----E~~~~~~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      +.|+.||+..    |.+-.+....|+.++.+-||.+..+....             .+... .  .....+-++..+|+|
T Consensus       154 avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~-------------~~~~~-~--~~~~~~~~~~~~~va  217 (265)
T COG0300         154 AVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDA-------------KGSDV-Y--LLSPGELVLSPEDVA  217 (265)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccc-------------ccccc-c--cccchhhccCHHHHH
Confidence            6799999954    44444555679999999999997664210             00000 0  001233578899999


Q ss_pred             HHHHHHhhcC
Q 019878          216 DGHIAAMEKG  225 (334)
Q Consensus       216 ~a~~~~~~~~  225 (334)
                      ++...++.+.
T Consensus       218 ~~~~~~l~~~  227 (265)
T COG0300         218 EAALKALEKG  227 (265)
T ss_pred             HHHHHHHhcC
Confidence            9999999874

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.80  E-value=7.9e-19  Score=150.11  Aligned_cols=208  Identities=17%  Similarity=0.155  Sum_probs=145.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEE-EcCCCCCCCC----C-CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRAL-VRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~----~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      +||||||+|+||.++++.|+++|++|+++ +|++.+...+    . ...++.++.+|++|.+.+.++++       ++|+
T Consensus         7 ~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   86 (247)
T PRK05565          7 VAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKIDI   86 (247)
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            59999999999999999999999999998 8876532211    1 01258899999999998877665       6899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      |||+||....      ..+..+..+++|+.++.++++.+...   .+.+++|++||...+.....              .
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~--------------~  152 (247)
T PRK05565         87 LVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASC--------------E  152 (247)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCC--------------c
Confidence            9999997421      11223567889999988888887653   13567999999766543221              2


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      ..|+.+|.+.+.+++.+.    ..|++++.+||+.+..+......   ......... .        .....+...+|++
T Consensus       153 ~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~---~~~~~~~~~-~--------~~~~~~~~~~~va  220 (247)
T PRK05565        153 VLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFS---EEDKEGLAE-E--------IPLGRLGKPEEIA  220 (247)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccC---hHHHHHHHh-c--------CCCCCCCCHHHHH
Confidence            569999998877766654    35899999999998765322111   111111111 0        1112356899999


Q ss_pred             HHHHHHhhcCC---CCCeEEecC
Q 019878          216 DGHIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       216 ~a~~~~~~~~~---~g~~~~i~g  235 (334)
                      +++..++....   .|+++++.+
T Consensus       221 ~~~~~l~~~~~~~~~g~~~~~~~  243 (247)
T PRK05565        221 KVVLFLASDDASYITGQIITVDG  243 (247)
T ss_pred             HHHHHHcCCccCCccCcEEEecC
Confidence            99999987643   577887754

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1e-18  Score=148.84  Aligned_cols=188  Identities=22%  Similarity=0.232  Sum_probs=138.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-CCCeEEEEcCCCChhhHHHHhcC----CCEEEEecccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-EGALELVYGDVTDYRSLVDACFG----CHVIFHTAALV   76 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~v~~~~~Dl~d~~~~~~~~~~----~d~vih~a~~~   76 (334)
                      +++||||+|+||.++++.|+++|++|++++|+++....+.. ..++.++.+|++|.+++.+++++    +|.+||+||..
T Consensus         3 ~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag~~   82 (240)
T PRK06101          3 AVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAGDC   82 (240)
T ss_pred             EEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCccc
Confidence            59999999999999999999999999999998654332221 12588999999999999888764    68999999863


Q ss_pred             CCC------CCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHH
Q 019878           77 EPW------LPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVA  149 (334)
Q Consensus        77 ~~~------~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~  149 (334)
                      ...      .++.+..+++|+.++.++++++.... ...++|++||.....+..              ....|+.+|.+.
T Consensus        83 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~--------------~~~~Y~asK~a~  148 (240)
T PRK06101         83 EYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALP--------------RAEAYGASKAAV  148 (240)
T ss_pred             ccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCC--------------CCchhhHHHHHH
Confidence            211      11234578999999999999998741 235799998854321111              135699999999


Q ss_pred             HHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcC
Q 019878          150 DKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG  225 (334)
Q Consensus       150 E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~  225 (334)
                      +.+.+.+.    ++|++++++||+.++++.....            ....          ...+..+|+++.+..+++..
T Consensus       149 ~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~------------~~~~----------~~~~~~~~~a~~i~~~i~~~  206 (240)
T PRK06101        149 AYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKN------------TFAM----------PMIITVEQASQEIRAQLARG  206 (240)
T ss_pred             HHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCC------------CCCC----------CcccCHHHHHHHHHHHHhcC
Confidence            98887654    4699999999999998742110            0000          01467999999999998864

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.80  E-value=7.7e-19  Score=151.27  Aligned_cols=210  Identities=23%  Similarity=0.221  Sum_probs=147.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++||||||+|+||+++++.|+++|++|++++|+.++...+.     ...++.++.+|+.+.+++.++++       ++|+
T Consensus        10 k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   89 (258)
T PRK06949         10 KVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTIDI   89 (258)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            46999999999999999999999999999999875432211     11368899999999988877765       4899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc----C-------CCcEEEEecccceeccCCCccCCCCC
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET----K-------TVEKIIYTSSFFALGSTDGYIADENQ  131 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~-------~~~~~v~~Ss~~v~~~~~~~~~~e~~  131 (334)
                      |||+||....      ..+++...+++|+.++.++++++...    .       ...++|++||...+....        
T Consensus        90 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~--------  161 (258)
T PRK06949         90 LVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLP--------  161 (258)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCC--------
Confidence            9999996321      11235567899999999999887632    0       125899999987654321        


Q ss_pred             ccccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCcee
Q 019878          132 VHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFS  207 (334)
Q Consensus       132 ~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (334)
                            ..++|+.+|.+.+.+.+.+.    ++|+++++++||.++++......  ..... .......+        ...
T Consensus       162 ------~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~--~~~~~-~~~~~~~~--------~~~  224 (258)
T PRK06949        162 ------QIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHW--ETEQG-QKLVSMLP--------RKR  224 (258)
T ss_pred             ------CccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhcc--ChHHH-HHHHhcCC--------CCC
Confidence                  13679999999988887754    35899999999999988532110  01111 11111111        123


Q ss_pred             eeeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          208 FCHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       208 ~i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +...+|+++++..++...   -.|.+..+.|
T Consensus       225 ~~~p~~~~~~~~~l~~~~~~~~~G~~i~~dg  255 (258)
T PRK06949        225 VGKPEDLDGLLLLLAADESQFINGAIISADD  255 (258)
T ss_pred             CcCHHHHHHHHHHHhChhhcCCCCcEEEeCC
Confidence            555899999999988743   2576666643

>PRK08643 acetoin reductase; Validated

Probab=99.80  E-value=1.4e-18  Score=149.41  Aligned_cols=212  Identities=21%  Similarity=0.257  Sum_probs=143.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CC-CCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.++...+    .. ..++.++.+|++|++.+.++++       ++|+|
T Consensus         4 ~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v   83 (256)
T PRK08643          4 VALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLNVV   83 (256)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            589999999999999999999999999999986543211    11 1257889999999998777664       48999


Q ss_pred             EEeccccCC--C----CCCcccchhhhhHHHHHHHHHHHhc----CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           70 FHTAALVEP--W----LPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        70 ih~a~~~~~--~----~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      ||+||....  .    .++.+..+++|+.++..+++.+.+.    +...++|++||...+.....              .
T Consensus        84 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~  149 (256)
T PRK08643         84 VNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPE--------------L  149 (256)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCC--------------C
Confidence            999986322  1    1223557889999988777777643    12358999998765432211              2


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHH-------HHHHHHHHcCCCCccccCCCCceee
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLV-------AKLMIERFNGRLPGYIGYGNDRFSF  208 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~  208 (334)
                      +.|+.+|.+.+.+.+.+.    +.|++++.++|+.+.++.........       ..+.........        ....+
T Consensus       150 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~  221 (256)
T PRK08643        150 AVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDI--------TLGRL  221 (256)
T ss_pred             chhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccC--------CCCCC
Confidence            669999998887777654    45899999999999876311000000       000000000110        11235


Q ss_pred             eeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          209 CHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       209 i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      ...+|+++++..++...   ..|.++.+.|
T Consensus       222 ~~~~~va~~~~~L~~~~~~~~~G~~i~vdg  251 (256)
T PRK08643        222 SEPEDVANCVSFLAGPDSDYITGQTIIVDG  251 (256)
T ss_pred             cCHHHHHHHHHHHhCccccCccCcEEEeCC
Confidence            67999999999998653   3588887753

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1.8e-18  Score=150.29  Aligned_cols=158  Identities=24%  Similarity=0.283  Sum_probs=120.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~a~   74 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+......+.. .++.++.+|+.|.+.+.++++       ++|+|||+||
T Consensus         3 ~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag   81 (274)
T PRK05693          3 VVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA-AGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAG   81 (274)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence            59999999999999999999999999999998754433222 257889999999988877653       5899999999


Q ss_pred             ccCC------CCCCcccchhhhhHHHHHHHHHHHhc--CCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHH
Q 019878           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKET--KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (334)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK  146 (334)
                      ....      ..++....+++|+.++.++++++...  ....++|++||...+....              ..+.|+.+|
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------~~~~Y~~sK  147 (274)
T PRK05693         82 YGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTP--------------FAGAYCASK  147 (274)
T ss_pred             CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCC--------------CccHHHHHH
Confidence            6322      11234567899999999999988543  1235899999865443221              136799999


Q ss_pred             HHHHHHHHHHh----hcCCCEEEEecCceecC
Q 019878          147 AVADKIALQAA----SEGLPIVPVYPGVIYGP  174 (334)
Q Consensus       147 ~~~E~~~~~~~----~~g~~~~ilR~~~v~G~  174 (334)
                      .+.+.+.+.+.    ++|++++.++|+.+..+
T Consensus       148 ~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~  179 (274)
T PRK05693        148 AAVHALSDALRLELAPFGVQVMEVQPGAIASQ  179 (274)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEecCccccc
Confidence            98888776643    46999999999999765

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.80  E-value=8.3e-19  Score=149.70  Aligned_cols=189  Identities=19%  Similarity=0.150  Sum_probs=138.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC------CCCCeEEEEcCCCChhhHHHHhc----CCCEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP------SEGALELVYGDVTDYRSLVDACF----GCHVIF   70 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~~v~~~~~Dl~d~~~~~~~~~----~~d~vi   70 (334)
                      |+++||||+|+||.++++.|+++|++|++++|++++.....      ...+++++++|+.|.+++.++++    ++|.||
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv   81 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIVL   81 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEEE
Confidence            46999999999999999999999999999999875432211      01368899999999988877665    479999


Q ss_pred             EeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccCh
Q 019878           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (334)
Q Consensus        71 h~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  141 (334)
                      |+||....      ..++....+++|+.++.++++++...   .+.+++|++||.....+..              ....
T Consensus        82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------------~~~~  147 (243)
T PRK07102         82 IAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRA--------------SNYV  147 (243)
T ss_pred             ECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCC--------------CCcc
Confidence            99986322      11123357889999999999888653   2457899999864332211              1256


Q ss_pred             HHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHH
Q 019878          142 YERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDG  217 (334)
Q Consensus       142 Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  217 (334)
                      |+.+|...+.+.+.+.    +.|+++.+++|+.++++....              ...+        ....+.++|++++
T Consensus       148 Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~--------------~~~~--------~~~~~~~~~~a~~  205 (243)
T PRK07102        148 YGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAG--------------LKLP--------GPLTAQPEEVAKD  205 (243)
T ss_pred             cHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhc--------------cCCC--------ccccCCHHHHHHH
Confidence            9999999888877753    458999999999998762110              0000        0124568999999


Q ss_pred             HHHHhhcC
Q 019878          218 HIAAMEKG  225 (334)
Q Consensus       218 ~~~~~~~~  225 (334)
                      +..+++++
T Consensus       206 i~~~~~~~  213 (243)
T PRK07102        206 IFRAIEKG  213 (243)
T ss_pred             HHHHHhCC
Confidence            99988864

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.80  E-value=7.5e-19  Score=151.54  Aligned_cols=197  Identities=22%  Similarity=0.203  Sum_probs=139.0

Q ss_pred             Cc-EEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC---CCCeEEEEcCCCChhhHHHHhc--------CCCE
Q 019878            1 MK-ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS---EGALELVYGDVTDYRSLVDACF--------GCHV   68 (334)
Q Consensus         1 m~-ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~v~~~~~Dl~d~~~~~~~~~--------~~d~   68 (334)
                      || +|||||+|+||++++++|+++|++|++++|+.++...+..   ...+.++.+|+.|.+++.++++        ++|+
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~   80 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV   80 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence            55 9999999999999999999999999999998765332211   1268899999999988877654        4699


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      |||+||....      ..++.+..+++|+.++.++++++.+.   .+..++|++||...+.....              .
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~  146 (260)
T PRK08267         81 LFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPG--------------L  146 (260)
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCC--------------c
Confidence            9999997432      11234568899999999999888542   23568999999754332211              2


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      +.|+.+|.+.+.+.+.+.    ++|+++++++|+.+-.+.......   ........           ...-.+..+|++
T Consensus       147 ~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~---~~~~~~~~-----------~~~~~~~~~~va  212 (260)
T PRK08267        147 AVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSN---EVDAGSTK-----------RLGVRLTPEDVA  212 (260)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccc---hhhhhhHh-----------hccCCCCHHHHH
Confidence            569999999988887764    358999999999987653211000   00000000           011135579999


Q ss_pred             HHHHHHhhcC
Q 019878          216 DGHIAAMEKG  225 (334)
Q Consensus       216 ~a~~~~~~~~  225 (334)
                      +++..++...
T Consensus       213 ~~~~~~~~~~  222 (260)
T PRK08267        213 EAVWAAVQHP  222 (260)
T ss_pred             HHHHHHHhCC
Confidence            9999998753

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.79  E-value=1.4e-18  Score=154.45  Aligned_cols=173  Identities=18%  Similarity=0.165  Sum_probs=123.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CC-CCCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      +++||||+|+||.++++.|+++|++|++++|+..+...    +. ....+.++.+|++|.+++.++++       .+|+|
T Consensus         8 ~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~l   87 (322)
T PRK07453          8 TVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPLDAL   87 (322)
T ss_pred             EEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCccEE
Confidence            49999999999999999999999999999997654221    11 11268899999999998877764       38999


Q ss_pred             EEeccccCC-------CCCCcccchhhhhHHHHHHHHHHHhc----C-CCcEEEEecccceeccC-CC---ccCCCC--C
Q 019878           70 FHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKET----K-TVEKIIYTSSFFALGST-DG---YIADEN--Q  131 (334)
Q Consensus        70 ih~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~~v~~Ss~~v~~~~-~~---~~~~e~--~  131 (334)
                      ||+||....       ...+++..+++|+.++.++++++.+.    + +..|+|++||...+... .+   .+..++  .
T Consensus        88 i~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~~~~  167 (322)
T PRK07453         88 VCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPADLGD  167 (322)
T ss_pred             EECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCccchhh
Confidence            999996432       11235667899999999998888753    1 13599999997765321 00   000000  0


Q ss_pred             c---------------cccccccChHHHHHHHHHHHHHHHhh-----cCCCEEEEecCceecC
Q 019878          132 V---------------HEEKYFCTQYERSKAVADKIALQAAS-----EGLPIVPVYPGVIYGP  174 (334)
Q Consensus       132 ~---------------~~~~~~~~~Y~~sK~~~E~~~~~~~~-----~g~~~~ilR~~~v~G~  174 (334)
                      .               ..+..+.+.|+.||.+.+.+.+.+.+     +|++++.+|||.|++.
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t  230 (322)
T PRK07453        168 LSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADT  230 (322)
T ss_pred             hhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCC
Confidence            0               01123457899999988776666542     3799999999999864

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.79  E-value=1e-17  Score=142.26  Aligned_cols=207  Identities=18%  Similarity=0.240  Sum_probs=145.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCCh-hhHHHHhcCCCEEEEeccccC--
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY-RSLVDACFGCHVIFHTAALVE--   77 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~-~~~~~~~~~~d~vih~a~~~~--   77 (334)
                      ++++||||+|+||+++++.|+++|++|++++|+.....    ..++.++.+|+.+. +.+.+.+.++|+|||+||...  
T Consensus         6 k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~~~~~   81 (235)
T PRK06550          6 KTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL----SGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGILDDY   81 (235)
T ss_pred             CEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc----CCcEEEEECChHHHHHHHHHhhCCCCEEEECCCCCCCC
Confidence            36999999999999999999999999999999865321    12688999999987 444444557999999999632  


Q ss_pred             -C----CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHH
Q 019878           78 -P----WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVA  149 (334)
Q Consensus        78 -~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~  149 (334)
                       .    ..++.+..+++|+.++.++++++...   .+.+++|++||...+.+...              ...|+.+|...
T Consensus        82 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~~~Y~~sK~a~  147 (235)
T PRK06550         82 KPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGG--------------GAAYTASKHAL  147 (235)
T ss_pred             CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCC--------------CcccHHHHHHH
Confidence             1    11234567899999999999988653   13458999999766543221              25699999988


Q ss_pred             HHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcC
Q 019878          150 DKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG  225 (334)
Q Consensus       150 E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~  225 (334)
                      +.+.+.+.    .+|+++++++|+.+.++.....  +....+.+......        ....+...+|+|+++..++...
T Consensus       148 ~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~--~~~~~~~~~~~~~~--------~~~~~~~~~~~a~~~~~l~s~~  217 (235)
T PRK06550        148 AGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAAD--FEPGGLADWVARET--------PIKRWAEPEEVAELTLFLASGK  217 (235)
T ss_pred             HHHHHHHHHHhhhcCeEEEEEeeCCccCcccccc--cCchHHHHHHhccC--------CcCCCCCHHHHHHHHHHHcChh
Confidence            87777654    3589999999999987743210  00111111111111        1233677899999999998653


Q ss_pred             ---CCCCeEEecC
Q 019878          226 ---RSGERYLLTG  235 (334)
Q Consensus       226 ---~~g~~~~i~g  235 (334)
                         ..|.++.+.|
T Consensus       218 ~~~~~g~~~~~~g  230 (235)
T PRK06550        218 ADYMQGTIVPIDG  230 (235)
T ss_pred             hccCCCcEEEECC
Confidence               2577777753

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.79  E-value=3e-18  Score=147.52  Aligned_cols=214  Identities=18%  Similarity=0.200  Sum_probs=142.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC-CC-------CCC-CCCeEEEEcCCCChhhHHHHhc-------C
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-SG-------LPS-EGALELVYGDVTDYRSLVDACF-------G   65 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~-------~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~   65 (334)
                      ++|||||+|+||.++++.|+++|++|+++.++.... +.       +.. ..++.++.+|++|.+++.++++       +
T Consensus        10 ~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   89 (257)
T PRK12744         10 VVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAFGR   89 (257)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhhCC
Confidence            599999999999999999999999988777654321 11       100 1257889999999998877664       4


Q ss_pred             CCEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           66 CHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        66 ~d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      +|++||+||....      ...+++..+++|+.++..+++++.+.. ...++++++|.......+              .
T Consensus        90 id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~~--------------~  155 (257)
T PRK12744         90 PDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFTP--------------F  155 (257)
T ss_pred             CCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccCC--------------C
Confidence            8999999997321      122355678999999999999997652 124666653332221111              1


Q ss_pred             cChHHHHHHHHHHHHHHHhh----cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          139 CTQYERSKAVADKIALQAAS----EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~~----~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      .+.|+.+|++.|.+.+.+..    .|++++.++||.+.++...+...  ..... . .....  .......+.+.+++|+
T Consensus       156 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~--~~~~~-~-~~~~~--~~~~~~~~~~~~~~dv  229 (257)
T PRK12744        156 YSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEG--AEAVA-Y-HKTAA--ALSPFSKTGLTDIEDI  229 (257)
T ss_pred             cccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccc--cchhh-c-ccccc--cccccccCCCCCHHHH
Confidence            36699999999999888753    37999999999997763211100  00000 0 00000  0111122357889999


Q ss_pred             HHHHHHHhhcCC--CCCeEEecC
Q 019878          215 VDGHIAAMEKGR--SGERYLLTG  235 (334)
Q Consensus       215 a~a~~~~~~~~~--~g~~~~i~g  235 (334)
                      ++++..++....  .|+++++.|
T Consensus       230 a~~~~~l~~~~~~~~g~~~~~~g  252 (257)
T PRK12744        230 VPFIRFLVTDGWWITGQTILING  252 (257)
T ss_pred             HHHHHHhhcccceeecceEeecC
Confidence            999999998532  488888864

>PRK07069 short chain dehydrogenase; Validated

Probab=99.79  E-value=1.8e-18  Score=148.38  Aligned_cols=209  Identities=20%  Similarity=0.206  Sum_probs=141.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcC-CCCCCCC----CC---CCCeEEEEcCCCChhhHHHHhc-------CC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRR-TSDISGL----PS---EGALELVYGDVTDYRSLVDACF-------GC   66 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~----~~---~~~v~~~~~Dl~d~~~~~~~~~-------~~   66 (334)
                      +++||||+|+||.++++.|+++|++|++++|+ .+....+    ..   ...+.++.+|+.|.+++.++++       ++
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            58999999999999999999999999999997 3322111    11   1134568899999998877664       47


Q ss_pred             CEEEEeccccCC------CCCCcccchhhhhH----HHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccc
Q 019878           67 HVIFHTAALVEP------WLPDPSRFFAVNVE----GLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (334)
Q Consensus        67 d~vih~a~~~~~------~~~~~~~~~~~n~~----~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~  136 (334)
                      |+|||+||....      ..++....+++|+.    +++.++..+++. +.+++|++||...+.....            
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~~ss~~~~~~~~~------------  147 (251)
T PRK07069         81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS-QPASIVNISSVAAFKAEPD------------  147 (251)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCcEEEEecChhhccCCCC------------
Confidence            999999997432      11133456778887    778888888776 5679999999887764332            


Q ss_pred             cccChHHHHHHHHHHHHHHHh----hc--CCCEEEEecCceecCCCCCchhHH--HHHHHHHHcCCCCccccCCCCceee
Q 019878          137 YFCTQYERSKAVADKIALQAA----SE--GLPIVPVYPGVIYGPGKLTTGNLV--AKLMIERFNGRLPGYIGYGNDRFSF  208 (334)
Q Consensus       137 ~~~~~Y~~sK~~~E~~~~~~~----~~--g~~~~ilR~~~v~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  208 (334)
                        ...|+.+|.+.+.+.+.+.    ++  +++++.++|+.+.++........+  ...+.....+ .        ....+
T Consensus       148 --~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~  216 (251)
T PRK07069        148 --YTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARG-V--------PLGRL  216 (251)
T ss_pred             --CchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhcc-C--------CCCCC
Confidence              2569999999988887654    23  488899999999887532100000  0111111111 1        12235


Q ss_pred             eeHHHHHHHHHHHhhcC---CCCCeEEec
Q 019878          209 CHVDDVVDGHIAAMEKG---RSGERYLLT  234 (334)
Q Consensus       209 i~v~D~a~a~~~~~~~~---~~g~~~~i~  234 (334)
                      .+++|+++++..++..+   ..|....+.
T Consensus       217 ~~~~~va~~~~~l~~~~~~~~~g~~i~~~  245 (251)
T PRK07069        217 GEPDDVAHAVLYLASDESRFVTGAELVID  245 (251)
T ss_pred             cCHHHHHHHHHHHcCccccCccCCEEEEC
Confidence            67999999999987653   246555553

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.79  E-value=3e-18  Score=147.35  Aligned_cols=211  Identities=17%  Similarity=0.195  Sum_probs=147.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CC-CCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++||||||+|+||.++++.|.++|++|++++|+.+....+    .. ..++.++.+|++|.+++.++++       ++|+
T Consensus        12 k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~   91 (255)
T PRK06113         12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKVDI   91 (255)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3699999999999999999999999999999876532211    10 1257889999999998876653       4799


Q ss_pred             EEEeccccCC--C---CCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           69 IFHTAALVEP--W---LPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        69 vih~a~~~~~--~---~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      |||+||....  .   .+++...+++|+.++.++++++...   .+..++|++||.....+..              +..
T Consensus        92 li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------------~~~  157 (255)
T PRK06113         92 LVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNI--------------NMT  157 (255)
T ss_pred             EEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCC--------------Ccc
Confidence            9999997432  1   1233446899999999999998742   1335899999976432211              135


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHH
Q 019878          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVD  216 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  216 (334)
                      .|+.+|.+.+.+++.+.    ..|+++.++.|+.+..+.....  ..+.+..+.... .+        ...+..++|+++
T Consensus       158 ~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~--~~~~~~~~~~~~-~~--------~~~~~~~~d~a~  226 (255)
T PRK06113        158 SYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV--ITPEIEQKMLQH-TP--------IRRLGQPQDIAN  226 (255)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccc--cCHHHHHHHHhc-CC--------CCCCcCHHHHHH
Confidence            69999999999888764    3589999999999876532110  111122222211 11        123567999999


Q ss_pred             HHHHHhhcCC---CCCeEEecCC
Q 019878          217 GHIAAMEKGR---SGERYLLTGE  236 (334)
Q Consensus       217 a~~~~~~~~~---~g~~~~i~g~  236 (334)
                      ++..++....   .|+++++.|.
T Consensus       227 ~~~~l~~~~~~~~~G~~i~~~gg  249 (255)
T PRK06113        227 AALFLCSPAASWVSGQILTVSGG  249 (255)
T ss_pred             HHHHHcCccccCccCCEEEECCC
Confidence            9999987532   5889998653

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.79  E-value=2.2e-18  Score=148.71  Aligned_cols=212  Identities=17%  Similarity=0.117  Sum_probs=145.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      ++|||||+|.||.++++.|+++|++|++++|+.+....+..  ..++.++.+|+.|.+++.++++       .+|++||+
T Consensus         8 ~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~   87 (261)
T PRK08265          8 VAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDILVNL   87 (261)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            59999999999999999999999999999998754322111  1258899999999988877664       47999999


Q ss_pred             ccccCC-----CCCCcccchhhhhHHHHHHHHHHHhcC--CCcEEEEecccceeccCCCccCCCCCccccccccChHHHH
Q 019878           73 AALVEP-----WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (334)
Q Consensus        73 a~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (334)
                      ||....     ..+++...+++|+.++..+++++....  ...++|++||.........              ...|+.+
T Consensus        88 ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~--------------~~~Y~as  153 (261)
T PRK08265         88 ACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTG--------------RWLYPAS  153 (261)
T ss_pred             CCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCC--------------CchhHHH
Confidence            996321     222445678899999999999887531  2358999999765432221              2569999


Q ss_pred             HHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHH
Q 019878          146 KAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAA  221 (334)
Q Consensus       146 K~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~  221 (334)
                      |...+.+.+.+.    ++|+++..++|+.+..+........-...........        .....+...+|+|+++..+
T Consensus       154 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~--------~p~~r~~~p~dva~~~~~l  225 (261)
T PRK08265        154 KAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPF--------HLLGRVGDPEEVAQVVAFL  225 (261)
T ss_pred             HHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhccc--------CCCCCccCHHHHHHHHHHH
Confidence            999888887654    3589999999998866531100000000000100000        0111245789999999999


Q ss_pred             hhcC---CCCCeEEecC
Q 019878          222 MEKG---RSGERYLLTG  235 (334)
Q Consensus       222 ~~~~---~~g~~~~i~g  235 (334)
                      +...   -.|..+.+.|
T Consensus       226 ~s~~~~~~tG~~i~vdg  242 (261)
T PRK08265        226 CSDAASFVTGADYAVDG  242 (261)
T ss_pred             cCccccCccCcEEEECC
Confidence            8753   2577888754

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.79  E-value=2.5e-18  Score=148.26  Aligned_cols=212  Identities=18%  Similarity=0.133  Sum_probs=146.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----C---CCCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P---SEGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~---~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+++....+    .   ...++.++.+|++|.+++.++++       .+|
T Consensus         9 ~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id   88 (260)
T PRK07063          9 VALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGPLD   88 (260)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhCCCc
Confidence            599999999999999999999999999999976543211    1   11257889999999988877765       589


Q ss_pred             EEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        68 ~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      ++||+||....      ..++++..+++|+.++..+++++...   .+..++|++||...+.....              
T Consensus        89 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------  154 (260)
T PRK07063         89 VLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPG--------------  154 (260)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCC--------------
Confidence            99999996321      12244567889999999999987643   13468999999765543221              


Q ss_pred             cChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhH--HHHHHHHHHcCCCCccccCCCCceeeeeHH
Q 019878          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNL--VAKLMIERFNGRLPGYIGYGNDRFSFCHVD  212 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  212 (334)
                      ...|+.+|++.+.+.+.+.    ++|+++..++||.+-.+........  -............+        ..-+...+
T Consensus       155 ~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--------~~r~~~~~  226 (260)
T PRK07063        155 CFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQP--------MKRIGRPE  226 (260)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCC--------CCCCCCHH
Confidence            2569999999988887764    4589999999999865531100000  00001111111111        11255689


Q ss_pred             HHHHHHHHHhhcC---CCCCeEEecC
Q 019878          213 DVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       213 D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      |+++++..++...   -.|....+.|
T Consensus       227 ~va~~~~fl~s~~~~~itG~~i~vdg  252 (260)
T PRK07063        227 EVAMTAVFLASDEAPFINATCITIDG  252 (260)
T ss_pred             HHHHHHHHHcCccccccCCcEEEECC
Confidence            9999999998753   2577777753

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.79  E-value=2.8e-18  Score=149.46  Aligned_cols=211  Identities=19%  Similarity=0.234  Sum_probs=145.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CC-CCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      +++||||+|+||+++++.|+++|++|++++|+.+....+    .. ..++.++.+|+.|.+++..+++       ++|+|
T Consensus        12 ~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l   91 (278)
T PRK08277         12 VAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPCDIL   91 (278)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            599999999999999999999999999999976432211    11 1257889999999988776654       58999


Q ss_pred             EEeccccCCC---------------------CCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCc
Q 019878           70 FHTAALVEPW---------------------LPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGY  125 (334)
Q Consensus        70 ih~a~~~~~~---------------------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~  125 (334)
                      ||+||.....                     .+++...+++|+.++..+++.+.+.   .+..++|++||...+.+... 
T Consensus        92 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~-  170 (278)
T PRK08277         92 INGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLTK-  170 (278)
T ss_pred             EECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCCCCC-
Confidence            9999953211                     1224457789999988776665432   13468999999887754321 


Q ss_pred             cCCCCCccccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCc----hhHHHHHHHHHHcCCCCc
Q 019878          126 IADENQVHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTT----GNLVAKLMIERFNGRLPG  197 (334)
Q Consensus       126 ~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~  197 (334)
                                   ...|+.+|.+.+.+.+.+.    .+|+++..++|+.+.++.....    ............ ...  
T Consensus       171 -------------~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~--  234 (278)
T PRK08277        171 -------------VPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKIL-AHT--  234 (278)
T ss_pred             -------------CchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHh-ccC--
Confidence                         2569999999998887764    3489999999999988742110    000001111111 111  


Q ss_pred             cccCCCCceeeeeHHHHHHHHHHHhhc-CC---CCCeEEecC
Q 019878          198 YIGYGNDRFSFCHVDDVVDGHIAAMEK-GR---SGERYLLTG  235 (334)
Q Consensus       198 ~~~~~~~~~~~i~v~D~a~a~~~~~~~-~~---~g~~~~i~g  235 (334)
                            ....+...+|+++++..++.. ..   .|....+.|
T Consensus       235 ------p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdg  270 (278)
T PRK08277        235 ------PMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDG  270 (278)
T ss_pred             ------CccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECC
Confidence                  122366789999999998875 22   577777754

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.79  E-value=2.1e-18  Score=148.40  Aligned_cols=211  Identities=15%  Similarity=0.149  Sum_probs=148.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----C-CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++++||||+|+||+++++.|+++|++|++++|+++....+    . ...++.++.+|+.|.+.+..+++       ++|+
T Consensus        12 k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   91 (256)
T PRK06124         12 QVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRLDI   91 (256)
T ss_pred             CEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            4699999999999999999999999999999986532211    1 11258899999999988877664       3699


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      |||+||....      ..++++..+++|+.++.++++.+.+.   .+.+++|++||...+.....              .
T Consensus        92 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~--------------~  157 (256)
T PRK06124         92 LVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAG--------------D  157 (256)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCC--------------c
Confidence            9999997432      11234557899999999999777652   14579999999765433221              2


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      ..|+.+|.+.+.+.+.+.    +.|+++..++|+.+.++......  ...-+........+        ...+++++|++
T Consensus       158 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~--~~~~~~~~~~~~~~--------~~~~~~~~~~a  227 (256)
T PRK06124        158 AVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMA--ADPAVGPWLAQRTP--------LGRWGRPEEIA  227 (256)
T ss_pred             cHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhc--cChHHHHHHHhcCC--------CCCCCCHHHHH
Confidence            569999999888877654    34899999999999987522110  00111111111111        12478999999


Q ss_pred             HHHHHHhhcCC---CCCeEEecC
Q 019878          216 DGHIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       216 ~a~~~~~~~~~---~g~~~~i~g  235 (334)
                      +++..++....   .|+.+.+.|
T Consensus       228 ~~~~~l~~~~~~~~~G~~i~~dg  250 (256)
T PRK06124        228 GAAVFLASPAASYVNGHVLAVDG  250 (256)
T ss_pred             HHHHHHcCcccCCcCCCEEEECC
Confidence            99999997652   477777653

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.79  E-value=3.8e-18  Score=146.46  Aligned_cols=209  Identities=17%  Similarity=0.166  Sum_probs=143.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCC-CCCCCCCC--CCCeEEEEcCCCChhhHHHHhcC--------CCEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISGLPS--EGALELVYGDVTDYRSLVDACFG--------CHVIF   70 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~~--------~d~vi   70 (334)
                      ++|||||+|+||+++++.|+++|++|+++.++. +....+..  ..++.++.+|+.|.+++.+++++        +|++|
T Consensus         7 ~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~li   86 (253)
T PRK08642          7 TVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPITTVV   86 (253)
T ss_pred             EEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence            599999999999999999999999998876543 22111100  02688999999999888777642        89999


Q ss_pred             EeccccCC------------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccc
Q 019878           71 HTAALVEP------------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEE  135 (334)
Q Consensus        71 h~a~~~~~------------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~  135 (334)
                      |+|+....            ..++....+++|+.++.++++++...   .+..++|++||.......             
T Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~-------------  153 (253)
T PRK08642         87 NNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPV-------------  153 (253)
T ss_pred             ECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCC-------------
Confidence            99985210            11123456899999999999998643   134689999985432111             


Q ss_pred             ccccChHHHHHHHHHHHHHHHhh----cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeH
Q 019878          136 KYFCTQYERSKAVADKIALQAAS----EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHV  211 (334)
Q Consensus       136 ~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  211 (334)
                       .+.+.|+.+|.+.|.+++.+.+    +|+++..++||.+..+......  ...... ......+        ...+.+.
T Consensus       154 -~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~--~~~~~~-~~~~~~~--------~~~~~~~  221 (253)
T PRK08642        154 -VPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAAT--PDEVFD-LIAATTP--------LRKVTTP  221 (253)
T ss_pred             -CCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccC--CHHHHH-HHHhcCC--------cCCCCCH
Confidence             1136799999999999988653    4799999999988664211100  011111 1111111        1347889


Q ss_pred             HHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          212 DDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       212 ~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +|+++++..++...   ..|+.+.+.|
T Consensus       222 ~~va~~~~~l~~~~~~~~~G~~~~vdg  248 (253)
T PRK08642        222 QEFADAVLFFASPWARAVTGQNLVVDG  248 (253)
T ss_pred             HHHHHHHHHHcCchhcCccCCEEEeCC
Confidence            99999999998743   3688888854

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.79  E-value=6.9e-18  Score=144.77  Aligned_cols=187  Identities=18%  Similarity=0.142  Sum_probs=132.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCC-CC----CCCCC--CCeEEEEcCCCChhhHHHHhc------CC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSD-IS----GLPSE--GALELVYGDVTDYRSLVDACF------GC   66 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~-~~----~~~~~--~~v~~~~~Dl~d~~~~~~~~~------~~   66 (334)
                      ++||||||+|+||.+++++|+++| ++|++++|++++ .+    .+...  .+++++.+|+.|.+++.+.++      ++
T Consensus         9 ~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g~i   88 (253)
T PRK07904          9 QTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGGDV   88 (253)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcCCC
Confidence            469999999999999999999985 999999998764 21    11111  268999999999887655443      59


Q ss_pred             CEEEEeccccCCCCC---Cc---ccchhhhhHHHHH----HHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccc
Q 019878           67 HVIFHTAALVEPWLP---DP---SRFFAVNVEGLKN----VVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (334)
Q Consensus        67 d~vih~a~~~~~~~~---~~---~~~~~~n~~~~~~----l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~  136 (334)
                      |++||++|.......   +.   ...+++|+.++..    ++..+.+. +..++|++||...+.+..             
T Consensus        89 d~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~-~~~~iv~isS~~g~~~~~-------------  154 (253)
T PRK07904         89 DVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQ-GFGQIIAMSSVAGERVRR-------------  154 (253)
T ss_pred             CEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhc-CCceEEEEechhhcCCCC-------------
Confidence            999999987432111   11   1357899988876    55566655 467999999975432211             


Q ss_pred             cccChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHH
Q 019878          137 YFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVD  212 (334)
Q Consensus       137 ~~~~~Y~~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  212 (334)
                       ....|+.||++...+.+.+    ..+|+++++++|+.+..+...           . . ...          ...+..+
T Consensus       155 -~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~-----------~-~-~~~----------~~~~~~~  210 (253)
T PRK07904        155 -SNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSA-----------H-A-KEA----------PLTVDKE  210 (253)
T ss_pred             -CCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhc-----------c-C-CCC----------CCCCCHH
Confidence             1256999999887665543    356999999999999865211           0 0 000          1136789


Q ss_pred             HHHHHHHHHhhcC
Q 019878          213 DVVDGHIAAMEKG  225 (334)
Q Consensus       213 D~a~a~~~~~~~~  225 (334)
                      |+|+.+..++.++
T Consensus       211 ~~A~~i~~~~~~~  223 (253)
T PRK07904        211 DVAKLAVTAVAKG  223 (253)
T ss_pred             HHHHHHHHHHHcC
Confidence            9999999999865

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.8e-18  Score=148.39  Aligned_cols=210  Identities=17%  Similarity=0.169  Sum_probs=142.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEc-CCCCCCC----CCC-CCCeEEEEcCCCChhhHHHHhc-----------
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISG----LPS-EGALELVYGDVTDYRSLVDACF-----------   64 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~----~~~-~~~v~~~~~Dl~d~~~~~~~~~-----------   64 (334)
                      ++|||||+|+||.++++.|++.|++|++..+ +.+....    +.. ...+..+.+|+.+.+.+...++           
T Consensus         6 ~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~g   85 (252)
T PRK12747          6 VALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRTG   85 (252)
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhhhcC
Confidence            6999999999999999999999999988753 3222111    111 1246788899999876554331           


Q ss_pred             --CCCEEEEeccccCC--C----CCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCcccc
Q 019878           65 --GCHVIFHTAALVEP--W----LPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEE  135 (334)
Q Consensus        65 --~~d~vih~a~~~~~--~----~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~  135 (334)
                        ++|++||+||....  .    .++++..+++|+.++..+++++.+.. ...++|++||...+...+.           
T Consensus        86 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-----------  154 (252)
T PRK12747         86 STKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPD-----------  154 (252)
T ss_pred             CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCC-----------
Confidence              58999999996322  1    11235677899999999999887652 2259999999876543221           


Q ss_pred             ccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeH
Q 019878          136 KYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHV  211 (334)
Q Consensus       136 ~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  211 (334)
                         .+.|+.+|++.+.+.+.+.    ++|+++..+.|+.+.++.......  ...........        .....+..+
T Consensus       155 ---~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~--------~~~~~~~~~  221 (252)
T PRK12747        155 ---FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLS--DPMMKQYATTI--------SAFNRLGEV  221 (252)
T ss_pred             ---chhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhccc--CHHHHHHHHhc--------CcccCCCCH
Confidence               2569999999998887654    458999999999998874211000  00111111110        012347789


Q ss_pred             HHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          212 DDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       212 ~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +|+++++..++...   ..|.++.+.|
T Consensus       222 ~dva~~~~~l~s~~~~~~~G~~i~vdg  248 (252)
T PRK12747        222 EDIADTAAFLASPDSRWVTGQLIDVSG  248 (252)
T ss_pred             HHHHHHHHHHcCccccCcCCcEEEecC
Confidence            99999999988653   2577887754

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.79  E-value=2.9e-18  Score=147.39  Aligned_cols=210  Identities=16%  Similarity=0.109  Sum_probs=147.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CC-CCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||+|+||.+++++|+++|++|++++|+.++...+    .. ...+.++.+|++|.+.+.++++       .+|+|
T Consensus        11 ~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v   90 (254)
T PRK08085         11 NILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPIDVL   90 (254)
T ss_pred             EEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            599999999999999999999999999999986543211    11 1257788999999998877664       38999


Q ss_pred             EEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        70 ih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      ||+||....      ..+++...+++|+.++..+++++.+.   .+..++|++||.....+..              ..+
T Consensus        91 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------------~~~  156 (254)
T PRK08085         91 INNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRD--------------TIT  156 (254)
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCC--------------CCc
Confidence            999996421      12234568899999999988887753   2346899999975432111              135


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHH
Q 019878          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVD  216 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  216 (334)
                      .|+.+|.+.+.+.+.+.    ++|+++..++||.+..+....... ... +........        ....+...+|+++
T Consensus       157 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~-~~~-~~~~~~~~~--------p~~~~~~~~~va~  226 (254)
T PRK08085        157 PYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVE-DEA-FTAWLCKRT--------PAARWGDPQELIG  226 (254)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhcc-CHH-HHHHHHhcC--------CCCCCcCHHHHHH
Confidence            69999999998888764    358999999999998874321100 011 111111111        1224678999999


Q ss_pred             HHHHHhhcCC---CCCeEEecC
Q 019878          217 GHIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       217 a~~~~~~~~~---~g~~~~i~g  235 (334)
                      ++..++....   .|.+..+.|
T Consensus       227 ~~~~l~~~~~~~i~G~~i~~dg  248 (254)
T PRK08085        227 AAVFLSSKASDFVNGHLLFVDG  248 (254)
T ss_pred             HHHHHhCccccCCcCCEEEECC
Confidence            9999887532   577777653

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.3e-18  Score=148.52  Aligned_cols=160  Identities=24%  Similarity=0.225  Sum_probs=120.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc-----------CCCEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-----------GCHVI   69 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----------~~d~v   69 (334)
                      |++|||||+|+||.+++++|+++|++|++++|+..+........++.++.+|+.|.+++.+++.           .+|++
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLL   81 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceEE
Confidence            6899999999999999999999999999999986532111111268899999999988877432           37899


Q ss_pred             EEeccccCCC-------CCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           70 FHTAALVEPW-------LPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        70 ih~a~~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      ||+||.....       .+++...+++|+.++..+.+.+.+.   .+.+++|++||...+.+..              +.
T Consensus        82 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------------~~  147 (243)
T PRK07023         82 INNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYA--------------GW  147 (243)
T ss_pred             EEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCC--------------Cc
Confidence            9999974321       1234567899999977776666543   1356999999987664322              13


Q ss_pred             ChHHHHHHHHHHHHHHHhh---cCCCEEEEecCceecC
Q 019878          140 TQYERSKAVADKIALQAAS---EGLPIVPVYPGVIYGP  174 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~~---~g~~~~ilR~~~v~G~  174 (334)
                      ..|+.+|.+.|.+++.+..   .|+++..++|+.+-.+
T Consensus       148 ~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~  185 (243)
T PRK07023        148 SVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTG  185 (243)
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence            6799999999999987763   4899999999988443

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.2e-17  Score=143.55  Aligned_cols=211  Identities=19%  Similarity=0.222  Sum_probs=145.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC-CC----CCC-CCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-SG----LPS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~----~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+.+.. ..    +.. ..++.++.+|+.|.+++.++++       .+|+
T Consensus        10 ~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~   89 (254)
T PRK06114         10 VAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGALTL   89 (254)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            599999999999999999999999999999975421 11    111 1257889999999988877664       3799


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      |||+||....      ..++.+..+++|+.++..+++++.+.   .+.+++|++||...+......            ..
T Consensus        90 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~------------~~  157 (254)
T PRK06114         90 AVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGL------------LQ  157 (254)
T ss_pred             EEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCC------------Cc
Confidence            9999997432      12234567889999998887776532   134689999997654322211            02


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      ..|+.+|++.+.+.+.+.    ++|+++.+++||.+.++..... .. ........ ...+        ...+..++|++
T Consensus       158 ~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~-~~-~~~~~~~~-~~~p--------~~r~~~~~dva  226 (254)
T PRK06114        158 AHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP-EM-VHQTKLFE-EQTP--------MQRMAKVDEMV  226 (254)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc-cc-hHHHHHHH-hcCC--------CCCCcCHHHHH
Confidence            569999998888777654    4589999999999988743211 11 11111111 1111        11255689999


Q ss_pred             HHHHHHhhcCC---CCCeEEecC
Q 019878          216 DGHIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       216 ~a~~~~~~~~~---~g~~~~i~g  235 (334)
                      +++..++....   .|+++.+.|
T Consensus       227 ~~~~~l~s~~~~~~tG~~i~~dg  249 (254)
T PRK06114        227 GPAVFLLSDAASFCTGVDLLVDG  249 (254)
T ss_pred             HHHHHHcCccccCcCCceEEECc
Confidence            99999886532   588888754

>PRK09242 tropinone reductase; Provisional

Probab=99.79  E-value=4.5e-18  Score=146.43  Aligned_cols=211  Identities=16%  Similarity=0.125  Sum_probs=148.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-------CCCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-------SEGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      ++|||||+|.||+++++.|.++|++|++++|+.+....+.       ...++.++.+|+.+.+++.++++       ++|
T Consensus        11 ~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id   90 (257)
T PRK09242         11 TALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWDGLH   90 (257)
T ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            6999999999999999999999999999999865422110       01267889999999988766553       479


Q ss_pred             EEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        68 ~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      +|||+||....      ..+++...+.+|+.++.++++++.+.   ...+++|++||...+.+...              
T Consensus        91 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~--------------  156 (257)
T PRK09242         91 ILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRS--------------  156 (257)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCC--------------
Confidence            99999996321      22345567899999999998888542   23568999999876654321              


Q ss_pred             cChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      .+.|+.+|.+.+.+.+.++    ..|++++.++|+.+.++....... ............+.         .-+...+|+
T Consensus       157 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~v  226 (257)
T PRK09242        157 GAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLS-DPDYYEQVIERTPM---------RRVGEPEEV  226 (257)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccC-ChHHHHHHHhcCCC---------CCCcCHHHH
Confidence            2569999999998888754    358999999999998875321110 11122222222111         124458999


Q ss_pred             HHHHHHHhhcC---CCCCeEEecCC
Q 019878          215 VDGHIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       215 a~a~~~~~~~~---~~g~~~~i~g~  236 (334)
                      +.++..++...   ..|+.+.+.|.
T Consensus       227 a~~~~~l~~~~~~~~~g~~i~~~gg  251 (257)
T PRK09242        227 AAAVAFLCMPAASYITGQCIAVDGG  251 (257)
T ss_pred             HHHHHHHhCcccccccCCEEEECCC
Confidence            99999988643   24777777543

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.79  E-value=4.4e-18  Score=146.55  Aligned_cols=209  Identities=17%  Similarity=0.171  Sum_probs=146.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CC-CCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||+|+||.++++.|++.|++|++++|+. +.+.+    .. ..++.++.+|+.+.+++.++++       .+|++
T Consensus        17 ~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   95 (258)
T PRK06935         17 VAIVTGGNTGLGQGYAVALAKAGADIIITTHGT-NWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKIDIL   95 (258)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCc-HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            599999999999999999999999999999873 21111    11 1368899999999998877765       57999


Q ss_pred             EEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        70 ih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      ||+||....      ..++++..+++|+.++..+++++.+.   .+..++|++||...+.+...              ..
T Consensus        96 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~  161 (258)
T PRK06935         96 VNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKF--------------VP  161 (258)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCC--------------ch
Confidence            999997432      11234567889999988888776543   23468999999877643321              25


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHH
Q 019878          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVD  216 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  216 (334)
                      .|+.+|.+.+.+.+.+.    ++|+++..++||.+..+....... ......... ...        ....+...+|+++
T Consensus       162 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~-~~~~~~~~~-~~~--------~~~~~~~~~dva~  231 (258)
T PRK06935        162 AYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRA-DKNRNDEIL-KRI--------PAGRWGEPDDLMG  231 (258)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhccc-ChHHHHHHH-hcC--------CCCCCCCHHHHHH
Confidence            69999999998887764    358999999999998763211000 001111111 111        1123677899999


Q ss_pred             HHHHHhhcC---CCCCeEEecC
Q 019878          217 GHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       217 a~~~~~~~~---~~g~~~~i~g  235 (334)
                      ++..++...   -.|.++.+.|
T Consensus       232 ~~~~l~s~~~~~~~G~~i~~dg  253 (258)
T PRK06935        232 AAVFLASRASDYVNGHILAVDG  253 (258)
T ss_pred             HHHHHcChhhcCCCCCEEEECC
Confidence            999888653   2578888754

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.78  E-value=2.9e-18  Score=147.24  Aligned_cols=211  Identities=19%  Similarity=0.177  Sum_probs=146.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CC-CCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||+|+||.+++++|+++|++|++++|+.++....    .. ..++.++.+|+.|.+++.++++       .+|+|
T Consensus         9 ~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~l   88 (253)
T PRK06172          9 VALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRLDYA   88 (253)
T ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            699999999999999999999999999999986542211    11 1258899999999988877664       36999


Q ss_pred             EEeccccCC-------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           70 FHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        70 ih~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      ||+||....       ..+++...+++|+.++..+++++...   ....++|++||...+.+...              .
T Consensus        89 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~--------------~  154 (253)
T PRK06172         89 FNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPK--------------M  154 (253)
T ss_pred             EECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCC--------------C
Confidence            999996321       11234567889999998777665432   23468999999877764332              3


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      ..|+.+|.+.+.+.+.+.    ..|+++..+.||.+-.+............. .......+        ...+...+|++
T Consensus       155 ~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~-~~~~~~~~--------~~~~~~p~~ia  225 (253)
T PRK06172        155 SIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKA-EFAAAMHP--------VGRIGKVEEVA  225 (253)
T ss_pred             chhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHH-HHHhccCC--------CCCccCHHHHH
Confidence            669999999988887765    348999999999986653211000001111 11111111        11256799999


Q ss_pred             HHHHHHhhcC---CCCCeEEecC
Q 019878          216 DGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       216 ~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +.+..++...   -.|+.+.+.|
T Consensus       226 ~~~~~l~~~~~~~~~G~~i~~dg  248 (253)
T PRK06172        226 SAVLYLCSDGASFTTGHALMVDG  248 (253)
T ss_pred             HHHHHHhCccccCcCCcEEEECC
Confidence            9999998753   2688888864

>PRK12742 oxidoreductase; Provisional

Probab=99.78  E-value=3.8e-18  Score=145.06  Aligned_cols=208  Identities=19%  Similarity=0.188  Sum_probs=142.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCC-CCCCCCCCCCCeEEEEcCCCChhhHHHHhc---CCCEEEEeccccC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISGLPSEGALELVYGDVTDYRSLVDACF---GCHVIFHTAALVE   77 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---~~d~vih~a~~~~   77 (334)
                      +||||||+|+||+++++.|+++|++|+++.++. +..+.+....++.++.+|++|.+++.+.++   ++|++||+||...
T Consensus         8 ~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag~~~   87 (237)
T PRK12742          8 KVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNAGIAV   87 (237)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECCCCCC
Confidence            599999999999999999999999998876643 222222111246788999999988877765   3899999998742


Q ss_pred             C------CCCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHH
Q 019878           78 P------WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD  150 (334)
Q Consensus        78 ~------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E  150 (334)
                      .      ...+++..+++|+.++..++..+.+.. ...++|++||......             +..+.+.|+.+|++.|
T Consensus        88 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~-------------~~~~~~~Y~~sKaa~~  154 (237)
T PRK12742         88 FGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRM-------------PVAGMAAYAASKSALQ  154 (237)
T ss_pred             CCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccC-------------CCCCCcchHHhHHHHH
Confidence            2      112346688999999999987776642 2358999999643210             0012367999999999


Q ss_pred             HHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcC-
Q 019878          151 KIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG-  225 (334)
Q Consensus       151 ~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~-  225 (334)
                      .+.+.+.    ++|+++++++||.+..+.......    .. .......+        ...+...+|+++++..++... 
T Consensus       155 ~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~----~~-~~~~~~~~--------~~~~~~p~~~a~~~~~l~s~~~  221 (237)
T PRK12742        155 GMARGLARDFGPRGITINVVQPGPIDTDANPANGP----MK-DMMHSFMA--------IKRHGRPEEVAGMVAWLAGPEA  221 (237)
T ss_pred             HHHHHHHHHHhhhCeEEEEEecCcccCCccccccH----HH-HHHHhcCC--------CCCCCCHHHHHHHHHHHcCccc
Confidence            8887754    358999999999997764321111    11 11111111        113567899999999988653 


Q ss_pred             --CCCCeEEecC
Q 019878          226 --RSGERYLLTG  235 (334)
Q Consensus       226 --~~g~~~~i~g  235 (334)
                        ..|..+.+.|
T Consensus       222 ~~~~G~~~~~dg  233 (237)
T PRK12742        222 SFVTGAMHTIDG  233 (237)
T ss_pred             CcccCCEEEeCC
Confidence              2577777743

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.78  E-value=1.1e-17  Score=144.25  Aligned_cols=212  Identities=17%  Similarity=0.133  Sum_probs=149.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCe-EEEEEcCCCCCCC----CCC-CCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHS-VRALVRRTSDISG----LPS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~----~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      +|+||||+|+||+.+++.|.++|++ |++++|+.++...    +.. ...+.++.+|+++.+++.++++       ++|+
T Consensus         8 ~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   87 (260)
T PRK06198          8 VALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGRLDA   87 (260)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            5999999999999999999999998 9999997653321    111 1257789999999988877664       4899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC----CCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      |||+||....      ..++....++.|+.++.++++++.+..    ...++|++||...++....              
T Consensus        88 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~--------------  153 (260)
T PRK06198         88 LVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPF--------------  153 (260)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCC--------------
Confidence            9999997431      112234568999999999998886531    1357999999887764321              


Q ss_pred             cChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchh----HHHHHHHHHHcCCCCccccCCCCceeeee
Q 019878          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGN----LVAKLMIERFNGRLPGYIGYGNDRFSFCH  210 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  210 (334)
                      .+.|+.+|...|.+.+.+.    ..+++++.++|+.++++.......    ....++... ....        ....+++
T Consensus       154 ~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~-~~~~--------~~~~~~~  224 (260)
T PRK06198        154 LAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKA-AATQ--------PFGRLLD  224 (260)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHH-hccC--------CccCCcC
Confidence            2669999999998888654    347999999999999875311000    001111111 1111        1234678


Q ss_pred             HHHHHHHHHHHhhcC---CCCCeEEecCC
Q 019878          211 VDDVVDGHIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       211 v~D~a~a~~~~~~~~---~~g~~~~i~g~  236 (334)
                      ++|+++++..++...   ..|+++.+.++
T Consensus       225 ~~~~a~~~~~l~~~~~~~~~G~~~~~~~~  253 (260)
T PRK06198        225 PDEVARAVAFLLSDESGLMTGSVIDFDQS  253 (260)
T ss_pred             HHHHHHHHHHHcChhhCCccCceEeECCc
Confidence            999999999987543   35888888654

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.78  E-value=7.1e-18  Score=144.76  Aligned_cols=211  Identities=17%  Similarity=0.176  Sum_probs=145.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC----C-CCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+....+.    . ...+.++.+|+.|.+++.++++       ++|+|
T Consensus        10 ~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   89 (252)
T PRK07035         10 IALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRLDIL   89 (252)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5999999999999999999999999999999765322111    1 1247889999999988776654       48999


Q ss_pred             EEeccccC---C----CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           70 FHTAALVE---P----WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        70 ih~a~~~~---~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      ||+||...   +    ..++.+..+++|+.++..+++++.+.   ....++|++||...+.+..              +.
T Consensus        90 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------------~~  155 (252)
T PRK07035         90 VNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGD--------------FQ  155 (252)
T ss_pred             EECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCC--------------CC
Confidence            99998632   1    11223457889999999888777433   2456899999865443221              13


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      +.|+.+|++.+.+.+.+.    ++|+++..+.|+.+-.+........ ........ ...+        ...+...+|++
T Consensus       156 ~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~-~~~~~~~~-~~~~--------~~~~~~~~~va  225 (252)
T PRK07035        156 GIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKN-DAILKQAL-AHIP--------LRRHAEPSEMA  225 (252)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCC-HHHHHHHH-ccCC--------CCCcCCHHHHH
Confidence            679999999999888765    3489999999999866532110000 01111111 1111        11355689999


Q ss_pred             HHHHHHhhcC---CCCCeEEecCC
Q 019878          216 DGHIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       216 ~a~~~~~~~~---~~g~~~~i~g~  236 (334)
                      +++..++...   ..|.++.+.|.
T Consensus       226 ~~~~~l~~~~~~~~~g~~~~~dgg  249 (252)
T PRK07035        226 GAVLYLASDASSYTTGECLNVDGG  249 (252)
T ss_pred             HHHHHHhCccccCccCCEEEeCCC
Confidence            9999988754   25778887543

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.78  E-value=4.3e-18  Score=145.75  Aligned_cols=188  Identities=20%  Similarity=0.200  Sum_probs=136.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----C---CCCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P---SEGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~---~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      ++|||||+|+||.++++.|+++|++|++++|++++...+    .   ....+.++.+|++|.+++.++++       ++|
T Consensus         4 ~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   83 (248)
T PRK08251          4 KILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGGLD   83 (248)
T ss_pred             EEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            599999999999999999999999999999986543211    0   01268899999999988776654       589


Q ss_pred             EEEEeccccCCC------CCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           68 VIFHTAALVEPW------LPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        68 ~vih~a~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      +|||+||.....      .......+++|+.++.++++++...   .+.+++|++||.......+.             +
T Consensus        84 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------------~  150 (248)
T PRK08251         84 RVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPG-------------V  150 (248)
T ss_pred             EEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCC-------------C
Confidence            999999974321      1123456789999999988887532   24679999999655432211             1


Q ss_pred             cChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      .+.|+.+|.+.+.+.+.+.    ..+++++.++|+.+.++....             .+.          ....+..+|.
T Consensus       151 ~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~-------------~~~----------~~~~~~~~~~  207 (248)
T PRK08251        151 KAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAK-------------AKS----------TPFMVDTETG  207 (248)
T ss_pred             cccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhc-------------ccc----------CCccCCHHHH
Confidence            2569999999888877654    247999999999997653210             000          0125678999


Q ss_pred             HHHHHHHhhcC
Q 019878          215 VDGHIAAMEKG  225 (334)
Q Consensus       215 a~a~~~~~~~~  225 (334)
                      ++++..++++.
T Consensus       208 a~~i~~~~~~~  218 (248)
T PRK08251        208 VKALVKAIEKE  218 (248)
T ss_pred             HHHHHHHHhcC
Confidence            99999999864

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.78  E-value=5.5e-18  Score=145.51  Aligned_cols=209  Identities=20%  Similarity=0.189  Sum_probs=145.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC----C-CCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.++.+.+.    . ..++.++.+|++|.+++.++++       ++|++
T Consensus        11 ~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   90 (253)
T PRK05867         11 RALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGIDIA   90 (253)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            5999999999999999999999999999999865432211    1 1257889999999988877664       58999


Q ss_pred             EEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC----CCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        70 ih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      ||+||....      ..++....+++|+.++..+++++.+..    ...++|++||....-...  +          ...
T Consensus        91 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~--~----------~~~  158 (253)
T PRK05867         91 VCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINV--P----------QQV  158 (253)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCC--C----------CCc
Confidence            999997432      112345577899999999999886541    124799998865321110  0          012


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      ..|+.+|.+.+.+.+.+.    ++|+++..++||.+-.+.....    .......... .+        ...+...+|++
T Consensus       159 ~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~----~~~~~~~~~~-~~--------~~r~~~p~~va  225 (253)
T PRK05867        159 SHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPY----TEYQPLWEPK-IP--------LGRLGRPEELA  225 (253)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccc----hHHHHHHHhc-CC--------CCCCcCHHHHH
Confidence            569999999998888764    3589999999999976642111    1111111111 11        12356799999


Q ss_pred             HHHHHHhhcCC---CCCeEEecC
Q 019878          216 DGHIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       216 ~a~~~~~~~~~---~g~~~~i~g  235 (334)
                      +++..++....   .|+++.+.|
T Consensus       226 ~~~~~L~s~~~~~~tG~~i~vdg  248 (253)
T PRK05867        226 GLYLYLASEASSYMTGSDIVIDG  248 (253)
T ss_pred             HHHHHHcCcccCCcCCCeEEECC
Confidence            99999987532   578888854

>PRK08589 short chain dehydrogenase; Validated

Probab=99.78  E-value=4.5e-18  Score=147.62  Aligned_cols=216  Identities=19%  Similarity=0.152  Sum_probs=144.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CCC-CCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPS-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+ +....    +.. ..++.++.+|++|.+++.++++       .+|++
T Consensus         8 ~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   86 (272)
T PRK08589          8 VAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVDVL   86 (272)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCcCEE
Confidence            59999999999999999999999999999998 33221    111 1258899999999988776654       47999


Q ss_pred             EEeccccCC---CC----CCcccchhhhhHHHHHHHHHHHhcC--CCcEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           70 FHTAALVEP---WL----PDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        70 ih~a~~~~~---~~----~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      ||+||....   ..    +..+..+++|+.++..+++++....  ...++|++||...+.+...              ..
T Consensus        87 i~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~  152 (272)
T PRK08589         87 FNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADLY--------------RS  152 (272)
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCCCC--------------Cc
Confidence            999997421   11    1234567889999887777765541  1258999999766543221              25


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHH
Q 019878          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVD  216 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  216 (334)
                      .|+.+|.+.+.+.+.+.    ++|+++..+.||.+..+........-...+...........    .....+..++|+++
T Consensus       153 ~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~va~  228 (272)
T PRK08589        153 GYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWM----TPLGRLGKPEEVAK  228 (272)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhcc----CCCCCCcCHHHHHH
Confidence            69999999998888764    45899999999999765321100000000000000000000    01112567999999


Q ss_pred             HHHHHhhcC---CCCCeEEecCC
Q 019878          217 GHIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       217 a~~~~~~~~---~~g~~~~i~g~  236 (334)
                      ++..++...   ..|.++.+.|.
T Consensus       229 ~~~~l~s~~~~~~~G~~i~vdgg  251 (272)
T PRK08589        229 LVVFLASDDSSFITGETIRIDGG  251 (272)
T ss_pred             HHHHHcCchhcCcCCCEEEECCC
Confidence            999988753   25778877543

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.78  E-value=1.5e-17  Score=141.34  Aligned_cols=205  Identities=18%  Similarity=0.173  Sum_probs=141.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC-CCCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEEEec
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-GLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~a   73 (334)
                      ++|||||+|+||+++++.|+++|++|++++|++.+.. .+.. .++.++.+|+.|.+++.++++       ++|++||+|
T Consensus         4 ~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~a   82 (236)
T PRK06483          4 PILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQ-AGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHNA   82 (236)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH-cCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEECC
Confidence            6999999999999999999999999999999865321 1111 246889999999988776653       389999999


Q ss_pred             cccCC------CCCCcccchhhhhHHHHHHHHHHHhcC---C--CcEEEEecccceeccCCCccCCCCCccccccccChH
Q 019878           74 ALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---T--VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (334)
Q Consensus        74 ~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~--~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y  142 (334)
                      |....      ..++.+..+++|+.++..+.+.+.+..   .  ..++|++||.........              ...|
T Consensus        83 g~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~--------------~~~Y  148 (236)
T PRK06483         83 SDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDK--------------HIAY  148 (236)
T ss_pred             ccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCC--------------CccH
Confidence            96322      122345678999999988777776531   1  358999998653322111              2569


Q ss_pred             HHHHHHHHHHHHHHhh---cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHH
Q 019878          143 ERSKAVADKIALQAAS---EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHI  219 (334)
Q Consensus       143 ~~sK~~~E~~~~~~~~---~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  219 (334)
                      +.+|.+.+.+.+.+..   .++++..++|+.+.-+...  ..   ......... .+ +       .-+...+|+++++.
T Consensus       149 ~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~--~~---~~~~~~~~~-~~-~-------~~~~~~~~va~~~~  214 (236)
T PRK06483        149 AASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGD--DA---AYRQKALAK-SL-L-------KIEPGEEEIIDLVD  214 (236)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCC--CH---HHHHHHhcc-Cc-c-------ccCCCHHHHHHHHH
Confidence            9999999999988763   2599999999988532211  11   111111111 11 0       11345899999999


Q ss_pred             HHhhcCC-CCCeEEecC
Q 019878          220 AAMEKGR-SGERYLLTG  235 (334)
Q Consensus       220 ~~~~~~~-~g~~~~i~g  235 (334)
                      .++.... .|.++.+.|
T Consensus       215 ~l~~~~~~~G~~i~vdg  231 (236)
T PRK06483        215 YLLTSCYVTGRSLPVDG  231 (236)
T ss_pred             HHhcCCCcCCcEEEeCc
Confidence            9986433 577777754

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.78  E-value=3.4e-18  Score=152.34  Aligned_cols=203  Identities=19%  Similarity=0.139  Sum_probs=140.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC----C-CCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      +|+||||+|+||.++++.|+++|++|++++|+++..+.+.    . ..++.++.+|++|.+++.++++       .+|++
T Consensus        10 ~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD~l   89 (334)
T PRK07109         10 VVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPIDTW   89 (334)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            5999999999999999999999999999999865432211    1 1257889999999998877754       58999


Q ss_pred             EEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        70 ih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      ||+||....      ..++.+..+++|+.+..++.+.+.+.   .+..++|++||...+...+.              .+
T Consensus        90 InnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~--------------~~  155 (334)
T PRK07109         90 VNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPL--------------QS  155 (334)
T ss_pred             EECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCc--------------ch
Confidence            999996321      11233456788877776655555432   13468999999888754321              26


Q ss_pred             hHHHHHHHHHHHHHHHh----h--cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          141 QYERSKAVADKIALQAA----S--EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~----~--~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      .|+.+|.+.+.+.+.+.    .  .++++++++|+.+.++...       . ..... +..      ......+..++|+
T Consensus       156 ~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~-------~-~~~~~-~~~------~~~~~~~~~pe~v  220 (334)
T PRK07109        156 AYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFD-------W-ARSRL-PVE------PQPVPPIYQPEVV  220 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhh-------h-hhhhc-ccc------ccCCCCCCCHHHH
Confidence            79999998887766543    2  3699999999998765310       1 11111 110      0112235679999


Q ss_pred             HHHHHHHhhcCCCCCeEEecC
Q 019878          215 VDGHIAAMEKGRSGERYLLTG  235 (334)
Q Consensus       215 a~a~~~~~~~~~~g~~~~i~g  235 (334)
                      |++++.++.++  ...+.+++
T Consensus       221 A~~i~~~~~~~--~~~~~vg~  239 (334)
T PRK07109        221 ADAILYAAEHP--RRELWVGG  239 (334)
T ss_pred             HHHHHHHHhCC--CcEEEeCc
Confidence            99999999875  33455544

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.78  E-value=9e-18  Score=138.85  Aligned_cols=185  Identities=23%  Similarity=0.209  Sum_probs=137.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc---CCCEEEEeccccC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF---GCHVIFHTAALVE   77 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---~~d~vih~a~~~~   77 (334)
                      |++|||||+|.||.++++.|.++ ++|++++|+..            .+.+|++|.+++.++++   ++|+|||+||...
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~------------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~   67 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG------------DVQVDITDPASIRALFEKVGKVDAVVSAAGKVH   67 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC------------ceEecCCChHHHHHHHHhcCCCCEEEECCCCCC
Confidence            89999999999999999999999 99999998753            36789999999888776   5899999999632


Q ss_pred             C------CCCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHH
Q 019878           78 P------WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD  150 (334)
Q Consensus        78 ~------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E  150 (334)
                      .      ..+++...+++|+.++.++++++.+.. ...+++++||.....+.+              ....|+.+|.+.+
T Consensus        68 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~--------------~~~~Y~~sK~a~~  133 (199)
T PRK07578         68 FAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIP--------------GGASAATVNGALE  133 (199)
T ss_pred             CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCC--------------CchHHHHHHHHHH
Confidence            1      112345567899999999999987641 224799999865432211              1367999999988


Q ss_pred             HHHHHHh---hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCC
Q 019878          151 KIALQAA---SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRS  227 (334)
Q Consensus       151 ~~~~~~~---~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~  227 (334)
                      .+.+.+.   ++|+++..++|+.+-.+..         ..     +..  ..+     ..++..+|+|+++..++.....
T Consensus       134 ~~~~~la~e~~~gi~v~~i~Pg~v~t~~~---------~~-----~~~--~~~-----~~~~~~~~~a~~~~~~~~~~~~  192 (199)
T PRK07578        134 GFVKAAALELPRGIRINVVSPTVLTESLE---------KY-----GPF--FPG-----FEPVPAARVALAYVRSVEGAQT  192 (199)
T ss_pred             HHHHHHHHHccCCeEEEEEcCCcccCchh---------hh-----hhc--CCC-----CCCCCHHHHHHHHHHHhcccee
Confidence            8877654   3589999999998743210         00     000  111     1367899999999999987777


Q ss_pred             CCeEEe
Q 019878          228 GERYLL  233 (334)
Q Consensus       228 g~~~~i  233 (334)
                      |++|++
T Consensus       193 g~~~~~  198 (199)
T PRK07578        193 GEVYKV  198 (199)
T ss_pred             eEEecc
Confidence            877765

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.78  E-value=6.1e-18  Score=145.17  Aligned_cols=212  Identities=14%  Similarity=0.111  Sum_probs=145.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      +++|||||+|+||.++++.|+++|++|++++|+......+.     ...++.++.+|++|.+++.++++       ++|+
T Consensus         2 k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (252)
T PRK07677          2 KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDA   81 (252)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            57999999999999999999999999999999865432211     11368899999999988877653       4799


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc----CCCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      |||+||....      ..+++...+++|+.++.++++++.+.    ....++|++||...+.....              
T Consensus        82 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~--------------  147 (252)
T PRK07677         82 LINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPG--------------  147 (252)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCC--------------
Confidence            9999985221      11234568899999999999999543    12358999998754322111              


Q ss_pred             cChHHHHHHHHHHHHHHHh----h-cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHH
Q 019878          139 CTQYERSKAVADKIALQAA----S-EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~----~-~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                      ...|+.+|.+.+.+.+.+.    + +|+++..++||.+.+++.......-........... +        ...+...+|
T Consensus       148 ~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~  218 (252)
T PRK07677        148 VIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSV-P--------LGRLGTPEE  218 (252)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccC-C--------CCCCCCHHH
Confidence            2569999999888877643    2 489999999999985421000000011122222111 1        113567899


Q ss_pred             HHHHHHHHhhcC---CCCCeEEecC
Q 019878          214 VVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       214 ~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +++++..++...   ..|.++.+.|
T Consensus       219 va~~~~~l~~~~~~~~~g~~~~~~g  243 (252)
T PRK07677        219 IAGLAYFLLSDEAAYINGTCITMDG  243 (252)
T ss_pred             HHHHHHHHcCccccccCCCEEEECC
Confidence            999998887653   3577777753

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.78  E-value=5.5e-18  Score=145.05  Aligned_cols=209  Identities=22%  Similarity=0.268  Sum_probs=139.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEc-CCCCCCC----CCC-CCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISG----LPS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~----~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      +||||||+|+||+.+++.|+++|++|+++.+ +++....    +.. ..++.++.+|+.|.+++.++++       ++|+
T Consensus         4 ~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   83 (248)
T PRK06947          4 VVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLDA   83 (248)
T ss_pred             EEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCCE
Confidence            5999999999999999999999999987654 3322111    110 1268899999999988776653       5899


Q ss_pred             EEEeccccCCC-------CCCcccchhhhhHHHHHHHHHHHhcCC------CcEEEEecccce-eccCCCccCCCCCccc
Q 019878           69 IFHTAALVEPW-------LPDPSRFFAVNVEGLKNVVQAAKETKT------VEKIIYTSSFFA-LGSTDGYIADENQVHE  134 (334)
Q Consensus        69 vih~a~~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~~~------~~~~v~~Ss~~v-~~~~~~~~~~e~~~~~  134 (334)
                      |||+||.....       .++....+.+|+.++..+++.+.+...      -.++|++||... ++....          
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~----------  153 (248)
T PRK06947         84 LVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNE----------  153 (248)
T ss_pred             EEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCC----------
Confidence            99999964221       112345688999999888866554311      236999998654 332211          


Q ss_pred             cccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeee
Q 019878          135 EKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCH  210 (334)
Q Consensus       135 ~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  210 (334)
                          ...|+.+|.+.+.+.+.+.    +.|++++++||+.+..+.....+.  ...... .....+        ..-...
T Consensus       154 ----~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~--~~~~~~-~~~~~~--------~~~~~~  218 (248)
T PRK06947        154 ----YVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQ--PGRAAR-LGAQTP--------LGRAGE  218 (248)
T ss_pred             ----CcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCC--HHHHHH-HhhcCC--------CCCCcC
Confidence                1459999999998877764    348999999999998874321111  111111 111111        011356


Q ss_pred             HHHHHHHHHHHhhcCC---CCCeEEecC
Q 019878          211 VDDVVDGHIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       211 v~D~a~a~~~~~~~~~---~g~~~~i~g  235 (334)
                      ++|++++++.++..+.   .|.++.+.|
T Consensus       219 ~e~va~~~~~l~~~~~~~~~G~~~~~~g  246 (248)
T PRK06947        219 ADEVAETIVWLLSDAASYVTGALLDVGG  246 (248)
T ss_pred             HHHHHHHHHHHcCccccCcCCceEeeCC
Confidence            8999999999887653   577776643

>PRK12743 oxidoreductase; Provisional

Probab=99.77  E-value=7.4e-18  Score=144.97  Aligned_cols=209  Identities=17%  Similarity=0.173  Sum_probs=145.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC-CCC----CCC-CCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISG----LPS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~----~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+|+||.++++.|+++|++|+++.++... ...    +.. ..++.++.+|++|.+++..+++       .+|+
T Consensus         4 ~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   83 (256)
T PRK12743          4 VAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRIDV   83 (256)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            59999999999999999999999999988765432 111    111 1258899999999988776654       4799


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC----CCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      |||+||....      ..++....+.+|+.++.++++++.+..    .-+++|++||.....+..              +
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~--------------~  149 (256)
T PRK12743         84 LVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLP--------------G  149 (256)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCC--------------C
Confidence            9999997432      112345678999999999999887642    125899999964332111              1


Q ss_pred             cChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      ...|+.+|.+.+.+++.+.    ++|++++.++|+.++++.......   ........+ .+        ...+.+.+|+
T Consensus       150 ~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~---~~~~~~~~~-~~--------~~~~~~~~dv  217 (256)
T PRK12743        150 ASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDS---DVKPDSRPG-IP--------LGRPGDTHEI  217 (256)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccCh---HHHHHHHhc-CC--------CCCCCCHHHH
Confidence            3679999999998877654    458999999999999875321111   111111111 11        1124578999


Q ss_pred             HHHHHHHhhcC---CCCCeEEecCC
Q 019878          215 VDGHIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       215 a~a~~~~~~~~---~~g~~~~i~g~  236 (334)
                      ++++..++...   ..|.++.+.|.
T Consensus       218 a~~~~~l~~~~~~~~~G~~~~~dgg  242 (256)
T PRK12743        218 ASLVAWLCSEGASYTTGQSLIVDGG  242 (256)
T ss_pred             HHHHHHHhCccccCcCCcEEEECCC
Confidence            99999888653   25888888643

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.77  E-value=6.3e-18  Score=148.03  Aligned_cols=190  Identities=18%  Similarity=0.252  Sum_probs=136.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++++||||+|+||.++++.|+++|++|++++|+.+..+.+..     ...+.++.+|+.|.+++.++++       ++|+
T Consensus        41 k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~  120 (293)
T PRK05866         41 KRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGVDI  120 (293)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            359999999999999999999999999999998654322110     1257789999999998887776       6899


Q ss_pred             EEEeccccCC--CC------CCcccchhhhhHHHHHHHHHHH----hcCCCcEEEEecccceeccCCCccCCCCCccccc
Q 019878           69 IFHTAALVEP--WL------PDPSRFFAVNVEGLKNVVQAAK----ETKTVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (334)
Q Consensus        69 vih~a~~~~~--~~------~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~  136 (334)
                      |||+||....  ..      ++....+++|+.++.++++++.    +. +..++|++||.+++....             
T Consensus       121 li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~-------------  186 (293)
T PRK05866        121 LINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLER-GDGHIINVATWGVLSEAS-------------  186 (293)
T ss_pred             EEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcEEEEECChhhcCCCC-------------
Confidence            9999997432  11      1234578899999888888765    33 457999999976654211             


Q ss_pred             cccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHH
Q 019878          137 YFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVD  212 (334)
Q Consensus       137 ~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  212 (334)
                      +..+.|+.+|++.+.+.+.+.    ++|+++++++||.+-.+....           .  ..   .  .+   ...+..+
T Consensus       187 p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~-----------~--~~---~--~~---~~~~~pe  245 (293)
T PRK05866        187 PLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAP-----------T--KA---Y--DG---LPALTAD  245 (293)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccc-----------c--cc---c--cC---CCCCCHH
Confidence            013679999999988877653    358999999999776542110           0  00   0  00   1235789


Q ss_pred             HHHHHHHHHhhcC
Q 019878          213 DVVDGHIAAMEKG  225 (334)
Q Consensus       213 D~a~a~~~~~~~~  225 (334)
                      ++|+.+..++++.
T Consensus       246 ~vA~~~~~~~~~~  258 (293)
T PRK05866        246 EAAEWMVTAARTR  258 (293)
T ss_pred             HHHHHHHHHHhcC
Confidence            9999999999864

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.77  E-value=2.1e-17  Score=141.67  Aligned_cols=210  Identities=14%  Similarity=0.165  Sum_probs=145.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC--CCCCC-CCCeEEEEcCCCChhhHHHHhc-------CCCEEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI--SGLPS-EGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih   71 (334)
                      ++|||||+|.||.++++.|+++|++|++++|+....  ..+.. ..++.++.+|++|.+++.++++       ++|++||
T Consensus        10 ~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~lv~   89 (251)
T PRK12481         10 VAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDILIN   89 (251)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            589999999999999999999999999998864211  01111 1258889999999998877764       4899999


Q ss_pred             eccccCC------CCCCcccchhhhhHHHHHHHHHHHhc----CCCcEEEEecccceeccCCCccCCCCCccccccccCh
Q 019878           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (334)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  141 (334)
                      +||....      ..++++..+++|+.++..+.+++.+.    +...++|++||...+.+...              ...
T Consensus        90 ~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~--------------~~~  155 (251)
T PRK12481         90 NAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIR--------------VPS  155 (251)
T ss_pred             CCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCC--------------Ccc
Confidence            9997432      12345668899999998888887653    11358999999877654322              245


Q ss_pred             HHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHH
Q 019878          142 YERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDG  217 (334)
Q Consensus       142 Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  217 (334)
                      |+.+|.+.+.+.+.+.    ++|+++..++||.+-.+....... ......... ...+        ...+...+|++++
T Consensus       156 Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~-~~~~~~~~~-~~~p--------~~~~~~peeva~~  225 (251)
T PRK12481        156 YTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRA-DTARNEAIL-ERIP--------ASRWGTPDDLAGP  225 (251)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhccc-ChHHHHHHH-hcCC--------CCCCcCHHHHHHH
Confidence            9999999888877654    469999999999986653211000 000111111 1111        1135679999999


Q ss_pred             HHHHhhcC---CCCCeEEecC
Q 019878          218 HIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       218 ~~~~~~~~---~~g~~~~i~g  235 (334)
                      +..++...   -.|..+.+.|
T Consensus       226 ~~~L~s~~~~~~~G~~i~vdg  246 (251)
T PRK12481        226 AIFLSSSASDYVTGYTLAVDG  246 (251)
T ss_pred             HHHHhCccccCcCCceEEECC
Confidence            99998643   2577777754

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.5e-17  Score=142.85  Aligned_cols=211  Identities=18%  Similarity=0.212  Sum_probs=144.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC----C-CCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||+|.||.++++.|+++|++|++++|++++.+.+.    . ..++.++.+|+.|.+++.++++       .+|++
T Consensus         8 ~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   87 (254)
T PRK07478          8 VAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGLDIA   87 (254)
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            5999999999999999999999999999999875433211    1 1257889999999998877764       58999


Q ss_pred             EEeccccCC--C-----CCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           70 FHTAALVEP--W-----LPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        70 ih~a~~~~~--~-----~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      ||+||....  .     .++....+++|+.++..+.+++...   .+..++|++||...+....             +..
T Consensus        88 i~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~-------------~~~  154 (254)
T PRK07478         88 FNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGF-------------PGM  154 (254)
T ss_pred             EECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCC-------------CCc
Confidence            999997421  1     1234567899998888776655432   1356899999976553111             013


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      ..|+.+|++.+.+.+.+.    .+|+++..++||.+-.+....... .... ........        ....+..++|++
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~-~~~~~~~~--------~~~~~~~~~~va  224 (254)
T PRK07478        155 AAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGD-TPEA-LAFVAGLH--------ALKRMAQPEEIA  224 (254)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccC-CHHH-HHHHHhcC--------CCCCCcCHHHHH
Confidence            679999999988888754    348999999999997653211100 0011 11111111        112356799999


Q ss_pred             HHHHHHhhcCC---CCCeEEecC
Q 019878          216 DGHIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       216 ~a~~~~~~~~~---~g~~~~i~g  235 (334)
                      +++..++....   .|.++.+.|
T Consensus       225 ~~~~~l~s~~~~~~~G~~~~~dg  247 (254)
T PRK07478        225 QAALFLASDAASFVTGTALLVDG  247 (254)
T ss_pred             HHHHHHcCchhcCCCCCeEEeCC
Confidence            99999886532   577777753

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.77  E-value=4.8e-18  Score=145.69  Aligned_cols=209  Identities=18%  Similarity=0.134  Sum_probs=136.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCC-CCCCCCC--CCCeEEEEcCCCChhhHHHHhcCC-----------C
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DISGLPS--EGALELVYGDVTDYRSLVDACFGC-----------H   67 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~~~-----------d   67 (334)
                      ++|||||+|+||+++++.|+++|++|++++|++. ....+..  ..+++++.+|++|.+++.++++++           .
T Consensus         3 ~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (251)
T PRK06924          3 YVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVSSI   82 (251)
T ss_pred             EEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCCce
Confidence            4999999999999999999999999999999862 2111111  136889999999999887776431           2


Q ss_pred             EEEEeccccCC-------CCCCcccchhhhhHHHHHHHHHHHhc----CCCcEEEEecccceeccCCCccCCCCCccccc
Q 019878           68 VIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (334)
Q Consensus        68 ~vih~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~  136 (334)
                      ++||+||...+       ...+....+++|+.+...+++.+...    +..+++|++||...+....             
T Consensus        83 ~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------------  149 (251)
T PRK06924         83 HLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYF-------------  149 (251)
T ss_pred             EEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCC-------------
Confidence            78999987422       11234456788988866666655443    2346899999976543211             


Q ss_pred             cccChHHHHHHHHHHHHHHHhh------cCCCEEEEecCceecCCCCCc---hhHHHHHHHHHHcCCCCccccCCCCcee
Q 019878          137 YFCTQYERSKAVADKIALQAAS------EGLPIVPVYPGVIYGPGKLTT---GNLVAKLMIERFNGRLPGYIGYGNDRFS  207 (334)
Q Consensus       137 ~~~~~Y~~sK~~~E~~~~~~~~------~g~~~~ilR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (334)
                       +.+.|+.+|.+.+.+.+.+..      .++++..++|+.+-.+.....   ..............     ..    ..-
T Consensus       150 -~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-----~~----~~~  219 (251)
T PRK06924        150 -GWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITL-----KE----EGK  219 (251)
T ss_pred             -CcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHH-----hh----cCC
Confidence             136799999999999887642      378899999998865421000   00000000011100     00    112


Q ss_pred             eeeHHHHHHHHHHHhhcC--CCCCeEEe
Q 019878          208 FCHVDDVVDGHIAAMEKG--RSGERYLL  233 (334)
Q Consensus       208 ~i~v~D~a~a~~~~~~~~--~~g~~~~i  233 (334)
                      +..++|+|+++..++..+  ..|+.+.+
T Consensus       220 ~~~~~dva~~~~~l~~~~~~~~G~~~~v  247 (251)
T PRK06924        220 LLSPEYVAKALRNLLETEDFPNGEVIDI  247 (251)
T ss_pred             cCCHHHHHHHHHHHHhcccCCCCCEeeh
Confidence            578999999999998762  24665554

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.77  E-value=1.2e-17  Score=144.46  Aligned_cols=212  Identities=16%  Similarity=0.134  Sum_probs=145.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CCC-CCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPS-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||+|+||.+++++|+++|++|++++|+.++...    +.. ..++.++.+|++|.+++.++++       .+|+|
T Consensus        12 ~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~l   91 (265)
T PRK07097         12 IALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVIDIL   91 (265)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            49999999999999999999999999999988654321    111 1258889999999998877764       38999


Q ss_pred             EEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        70 ih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      ||+||....      ..+++...+++|+.++..+.+.+...   .+..++|++||........              ...
T Consensus        92 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------~~~  157 (265)
T PRK07097         92 VNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRE--------------TVS  157 (265)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCC--------------CCc
Confidence            999997432      12234557789999999888887652   1356899999864322111              136


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhH----HHHHHHHHHcCCCCccccCCCCceeeeeHH
Q 019878          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNL----VAKLMIERFNGRLPGYIGYGNDRFSFCHVD  212 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  212 (334)
                      .|+.+|.+.+.+.+.+.    +.|+++..++||.+.++........    -...+........+        ...+...+
T Consensus       158 ~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~  229 (265)
T PRK07097        158 AYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTP--------AARWGDPE  229 (265)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCC--------ccCCcCHH
Confidence            69999999998888765    3489999999999988742110000    00001111111111        12356789


Q ss_pred             HHHHHHHHHhhcC---CCCCeEEecC
Q 019878          213 DVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       213 D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      |+++++..++...   ..|.++.+.|
T Consensus       230 dva~~~~~l~~~~~~~~~g~~~~~~g  255 (265)
T PRK07097        230 DLAGPAVFLASDASNFVNGHILYVDG  255 (265)
T ss_pred             HHHHHHHHHhCcccCCCCCCEEEECC
Confidence            9999999998763   2577777754

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.1e-17  Score=147.81  Aligned_cols=172  Identities=18%  Similarity=0.093  Sum_probs=120.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CC---CCCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LP---SEGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~---~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      +||||||+|+||.++++.|+++|++|++++|+.++...    +.   ....+.++.+|+.|.+++.++++       ++|
T Consensus        18 ~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD   97 (306)
T PRK06197         18 VAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYPRID   97 (306)
T ss_pred             EEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCCCCC
Confidence            69999999999999999999999999999997543211    11   01258899999999998877654       489


Q ss_pred             EEEEeccccCC----CCCCcccchhhhhHH----HHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           68 VIFHTAALVEP----WLPDPSRFFAVNVEG----LKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        68 ~vih~a~~~~~----~~~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      +|||+||....    ..++.+..+++|+.+    +..++..+++. +.+++|++||...+..... ..++.....+..+.
T Consensus        98 ~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~vSS~~~~~~~~~-~~~~~~~~~~~~~~  175 (306)
T PRK06197         98 LLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPV-PGSRVVTVSSGGHRIRAAI-HFDDLQWERRYNRV  175 (306)
T ss_pred             EEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhC-CCCEEEEECCHHHhccCCC-CccccCcccCCCcH
Confidence            99999997432    123456678999999    55666666655 4579999999864431111 11111111112235


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEE--EecCceecCC
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVP--VYPGVIYGPG  175 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~i--lR~~~v~G~~  175 (334)
                      +.|+.||++.+.+.+.+.    ..|+++.+  +.||.+..+.
T Consensus       176 ~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~  217 (306)
T PRK06197        176 AAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTEL  217 (306)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcc
Confidence            789999999988887754    24666555  4799887664

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.77  E-value=6.3e-18  Score=150.02  Aligned_cols=196  Identities=17%  Similarity=0.184  Sum_probs=138.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC----C-CCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||+|.||.++++.|+++|++|++++|+++..+.+.    . ...+.++.+|++|.+++.++++       ++|++
T Consensus         9 ~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   88 (330)
T PRK06139          9 VVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRIDVW   88 (330)
T ss_pred             EEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            5999999999999999999999999999999876432211    1 1257788999999998887763       48999


Q ss_pred             EEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        70 ih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      ||+||....      ..++.+..+++|+.++.++.+++...   .+..++|++||...+...+.              ..
T Consensus        89 VnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~--------------~~  154 (330)
T PRK06139         89 VNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPY--------------AA  154 (330)
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCC--------------ch
Confidence            999997322      11233457899999999988887532   13458999999776543321              36


Q ss_pred             hHHHHHHHHHHHHHH----Hhhc-CCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          141 QYERSKAVADKIALQ----AASE-GLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~----~~~~-g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      .|+.+|.+.+.+.+.    +.+. |++++.+.|+.+.++......+.         .+...      .....+...+|+|
T Consensus       155 ~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~---------~~~~~------~~~~~~~~pe~vA  219 (330)
T PRK06139        155 AYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANY---------TGRRL------TPPPPVYDPRRVA  219 (330)
T ss_pred             hHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccc---------ccccc------cCCCCCCCHHHHH
Confidence            799999975555544    4443 89999999999988753211100         01100      1112356899999


Q ss_pred             HHHHHHhhcCC
Q 019878          216 DGHIAAMEKGR  226 (334)
Q Consensus       216 ~a~~~~~~~~~  226 (334)
                      ++++.++.++.
T Consensus       220 ~~il~~~~~~~  230 (330)
T PRK06139        220 KAVVRLADRPR  230 (330)
T ss_pred             HHHHHHHhCCC
Confidence            99999998754

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.77  E-value=2e-17  Score=141.46  Aligned_cols=208  Identities=20%  Similarity=0.195  Sum_probs=140.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCC-CCC----CCCCC-CCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDI----SGLPS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~-~~~----~~~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+|+||+++++.|+++|++|++..+.. ...    +.+.. ...+..+.+|+.|.+++.++++       ++|+
T Consensus         5 ~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   84 (246)
T PRK12938          5 IAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEIDV   84 (246)
T ss_pred             EEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            489999999999999999999999988865432 211    11111 1256778999999988877654       4899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      |||+||....      ..++++..+++|+.++..+.+.+.+.   .+..++|++||.....+..              ..
T Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------------~~  150 (246)
T PRK12938         85 LVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQF--------------GQ  150 (246)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCC--------------CC
Confidence            9999997432      12345667899999977766665442   2456999999864432211              13


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      +.|+.+|.+.+.+.+.+.    ..|+++..++|+.+.++....   .....+.... +..+        ...+...+|++
T Consensus       151 ~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~---~~~~~~~~~~-~~~~--------~~~~~~~~~v~  218 (246)
T PRK12938        151 TNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA---IRPDVLEKIV-ATIP--------VRRLGSPDEIG  218 (246)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhh---cChHHHHHHH-hcCC--------ccCCcCHHHHH
Confidence            679999998887776654    358999999999998774321   1112222211 1111        12345689999


Q ss_pred             HHHHHHhhcC---CCCCeEEecC
Q 019878          216 DGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       216 ~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +++..++...   ..|..+.+.|
T Consensus       219 ~~~~~l~~~~~~~~~g~~~~~~~  241 (246)
T PRK12938        219 SIVAWLASEESGFSTGADFSLNG  241 (246)
T ss_pred             HHHHHHcCcccCCccCcEEEECC
Confidence            9999888653   2577777754

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.76  E-value=1e-17  Score=140.87  Aligned_cols=193  Identities=19%  Similarity=0.147  Sum_probs=141.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc----CCCEEEEecccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF----GCHVIFHTAALV   76 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----~~d~vih~a~~~   76 (334)
                      ||++||||+|.||+++++.|+++|++|++++|+.++...+....+++++.+|+.|.+++.++++    .+|++||+|+..
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag~~   80 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPAPS   80 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCCcc
Confidence            8999999999999999999999999999999986544322221246788999999998887765    489999999741


Q ss_pred             C----C-------CCCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCccccccccChHHH
Q 019878           77 E----P-------WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (334)
Q Consensus        77 ~----~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (334)
                      .    +       ..+++...+++|+.++.++++++.+.. .-.++|++||..   . .              ..+.|+.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~---~-~--------------~~~~Y~a  142 (223)
T PRK05884         81 WDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN---P-P--------------AGSAEAA  142 (223)
T ss_pred             ccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC---C-C--------------CccccHH
Confidence            1    0       123456688999999999999997642 125899999864   0 0              1256999


Q ss_pred             HHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHH
Q 019878          145 SKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIA  220 (334)
Q Consensus       145 sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~  220 (334)
                      +|++.+.+.+.+.    ++|+++..+.||.+..+..           .. .. ..+           ....+|+++++..
T Consensus       143 sKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~-----------~~-~~-~~p-----------~~~~~~ia~~~~~  198 (223)
T PRK05884        143 IKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGY-----------DG-LS-RTP-----------PPVAAEIARLALF  198 (223)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhh-----------hh-cc-CCC-----------CCCHHHHHHHHHH
Confidence            9998888877654    4589999999998854310           00 00 111           1168999999999


Q ss_pred             HhhcC---CCCCeEEecC
Q 019878          221 AMEKG---RSGERYLLTG  235 (334)
Q Consensus       221 ~~~~~---~~g~~~~i~g  235 (334)
                      ++...   ..|+++.+.|
T Consensus       199 l~s~~~~~v~G~~i~vdg  216 (223)
T PRK05884        199 LTTPAARHITGQTLHVSH  216 (223)
T ss_pred             HcCchhhccCCcEEEeCC
Confidence            88653   2577777754

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.76  E-value=2.1e-17  Score=142.58  Aligned_cols=208  Identities=14%  Similarity=0.131  Sum_probs=143.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CC--CCCeEEEEcCCCChhhHHHHhc------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS--EGALELVYGDVTDYRSLVDACF------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~--~~~v~~~~~Dl~d~~~~~~~~~------~~d~v   69 (334)
                      ++|||||+|.||.++++.|+++|++|++++|+.++...+    ..  ..++.++.+|++|.+++.++++      .+|++
T Consensus        10 ~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~iD~l   89 (263)
T PRK08339         10 LAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEPDIF   89 (263)
T ss_pred             EEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCCcEE
Confidence            489999999999999999999999999999986543211    11  1258899999999998877765      48999


Q ss_pred             EEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        70 ih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      ||+||....      ..+++...+++|+.+...+++.+.+.   .+..++|++||...+.+.+.              ..
T Consensus        90 v~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~--------------~~  155 (263)
T PRK08339         90 FFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPN--------------IA  155 (263)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCc--------------ch
Confidence            999996322      12345567889988877766665433   13468999999875533221              25


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHH-----------HHHHHHHHcCCCCccccCCCCc
Q 019878          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLV-----------AKLMIERFNGRLPGYIGYGNDR  205 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~  205 (334)
                      .|+.+|.+.+.+.+.+.    ++|+++..+.||.+..+..   ....           ...... .....        ..
T Consensus       156 ~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~--------p~  223 (263)
T PRK08339        156 LSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRV---IQLAQDRAKREGKSVEEALQE-YAKPI--------PL  223 (263)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHH---HHHHHhhhhccCCCHHHHHHH-HhccC--------Cc
Confidence            69999998887776653    4689999999999965421   0000           011111 11111        11


Q ss_pred             eeeeeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          206 FSFCHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       206 ~~~i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      ..+...+|+++++..++...   -.|+++.+.|
T Consensus       224 ~r~~~p~dva~~v~fL~s~~~~~itG~~~~vdg  256 (263)
T PRK08339        224 GRLGEPEEIGYLVAFLASDLGSYINGAMIPVDG  256 (263)
T ss_pred             ccCcCHHHHHHHHHHHhcchhcCccCceEEECC
Confidence            23667899999999988643   3588888854

>TIGR02415 23BDH acetoin reductases

Probab=99.76  E-value=2.6e-18  Score=147.60  Aligned_cols=215  Identities=20%  Similarity=0.210  Sum_probs=143.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CCC-CCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPS-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      +++||||+|+||.++++.|+++|++|++++|+.+....    +.. ...+.++.+|++|.+++.++++       .+|+|
T Consensus         2 ~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v   81 (254)
T TIGR02415         2 VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVM   81 (254)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            69999999999999999999999999999997543211    111 1257899999999998877653       47999


Q ss_pred             EEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc----CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        70 ih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      ||+||....      ..++.+..+++|+.++..+++++.+.    +...++|++||.....+.+.              .
T Consensus        82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~  147 (254)
T TIGR02415        82 VNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPI--------------L  147 (254)
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCC--------------C
Confidence            999987422      11234567899999988777766542    22358999998655432221              3


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCc----cccCCCCceeeeeH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPG----YIGYGNDRFSFCHV  211 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~v  211 (334)
                      +.|+.+|.+.+.+.+.+.    +.++++.+++|+.+..+...   . +...... ..+....    .+........+..+
T Consensus       148 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~---~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  222 (254)
T TIGR02415       148 SAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWE---E-IDEETSE-IAGKPIGEGFEEFSSEIALGRPSEP  222 (254)
T ss_pred             cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhh---h-hhhhhhh-cccCchHHHHHHHHhhCCCCCCCCH
Confidence            669999999998887654    34899999999988665311   0 0000000 0000000    00000111237789


Q ss_pred             HHHHHHHHHHhhcCC---CCCeEEecC
Q 019878          212 DDVVDGHIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       212 ~D~a~a~~~~~~~~~---~g~~~~i~g  235 (334)
                      +|+++++..++....   .|.++.+.|
T Consensus       223 ~~~a~~~~~l~~~~~~~~~g~~~~~d~  249 (254)
T TIGR02415       223 EDVAGLVSFLASEDSDYITGQSILVDG  249 (254)
T ss_pred             HHHHHHHHhhcccccCCccCcEEEecC
Confidence            999999999998753   466666643

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.76  E-value=5.4e-18  Score=163.65  Aligned_cols=217  Identities=17%  Similarity=0.171  Sum_probs=144.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-------CCCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-------SEGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+.+....+.       ....+..+.+|++|.+++.++++       ++|
T Consensus       416 vvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iD  495 (676)
T TIGR02632       416 VAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVD  495 (676)
T ss_pred             EEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCc
Confidence            5999999999999999999999999999999865332111       11246789999999999888775       589


Q ss_pred             EEEEeccccCC--C----CCCcccchhhhhHHHHHHHHHHHh----cCCCcEEEEecccceeccCCCccCCCCCcccccc
Q 019878           68 VIFHTAALVEP--W----LPDPSRFFAVNVEGLKNVVQAAKE----TKTVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        68 ~vih~a~~~~~--~----~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~  137 (334)
                      +|||+||....  .    .+++...+++|+.+...+.+.+..    .+...++|++||...+.+...             
T Consensus       496 ilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~-------------  562 (676)
T TIGR02632       496 IVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKN-------------  562 (676)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCC-------------
Confidence            99999997432  1    112345678888887777655543    222358999999654432211             


Q ss_pred             ccChHHHHHHHHHHHHHHHhh----cCCCEEEEecCcee-cCCCCCchhHHHHHHHHHHcCCCC----ccccCCCCceee
Q 019878          138 FCTQYERSKAVADKIALQAAS----EGLPIVPVYPGVIY-GPGKLTTGNLVAKLMIERFNGRLP----GYIGYGNDRFSF  208 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ilR~~~v~-G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~  208 (334)
                       ...|+.+|.+.+.+++.+..    +|+++..++|+.|+ |.+.+.. .+......  ..+...    ..+........+
T Consensus       563 -~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~r~~l~r~  638 (676)
T TIGR02632       563 -ASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDG-EWREERAA--AYGIPADELEEHYAKRTLLKRH  638 (676)
T ss_pred             -CHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccc-cchhhhhh--cccCChHHHHHHHHhcCCcCCC
Confidence             36799999999999887653    48999999999987 4332111 00000000  000000    001112233457


Q ss_pred             eeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          209 CHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       209 i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      ++++|+|+++..++...   ..|.++++.|
T Consensus       639 v~peDVA~av~~L~s~~~~~~TG~~i~vDG  668 (676)
T TIGR02632       639 IFPADIAEAVFFLASSKSEKTTGCIITVDG  668 (676)
T ss_pred             cCHHHHHHHHHHHhCCcccCCcCcEEEECC
Confidence            89999999999887643   3588999864

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.76  E-value=1.8e-17  Score=141.34  Aligned_cols=208  Identities=20%  Similarity=0.205  Sum_probs=140.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcC-CCCCCC----CC-CCCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRR-TSDISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~----~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      +++|||||+|+||+++++.|+++|++|+++.|+ +.....    .. ...++.++.+|+.|.+++.++++       .+|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            468999999999999999999999999999883 221111    00 01268899999999988766653       489


Q ss_pred             EEEEeccccCC------CCCCcccchhhhhHHHHHHHHHH----HhcCCCcEEEEecccceeccCCCccCCCCCcccccc
Q 019878           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAA----KETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        68 ~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~  137 (334)
                      +|||+||....      ..+++...++.|+.++..+++.+    ++. +.+++|++||........              
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~~--------------  145 (242)
T TIGR01829        81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRER-GWGRIINISSVNGQKGQF--------------  145 (242)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcchhhcCCCC--------------
Confidence            99999986432      11234556788999987765554    443 567999999864432211              


Q ss_pred             ccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHH
Q 019878          138 FCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                      ....|+.+|.+.+.+.+.+.    ..|++++.++|+.+.++.....   ....+...... .+        ...+...+|
T Consensus       146 ~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~---~~~~~~~~~~~-~~--------~~~~~~~~~  213 (242)
T TIGR01829       146 GQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAM---REDVLNSIVAQ-IP--------VGRLGRPEE  213 (242)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCcccccc---chHHHHHHHhc-CC--------CCCCcCHHH
Confidence            12569999998887776653    3589999999999988753221   11222222211 11        112445799


Q ss_pred             HHHHHHHHhhcC---CCCCeEEecC
Q 019878          214 VVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       214 ~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +++++..++..+   -.|+++.+.|
T Consensus       214 ~a~~~~~l~~~~~~~~~G~~~~~~g  238 (242)
T TIGR01829       214 IAAAVAFLASEEAGYITGATLSING  238 (242)
T ss_pred             HHHHHHHHcCchhcCccCCEEEecC
Confidence            999998877653   2577888854

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.76  E-value=1.7e-16  Score=122.68  Aligned_cols=206  Identities=22%  Similarity=0.281  Sum_probs=145.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~   80 (334)
                      |||.|.||||.+|+.+++....+||+|+++.|++.+....   +.+..++.|+.|++++.+.+.++|+||..-+...+  
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~---~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~--   75 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR---QGVTILQKDIFDLTSLASDLAGHDAVISAFGAGAS--   75 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc---ccceeecccccChhhhHhhhcCCceEEEeccCCCC--
Confidence            9999999999999999999999999999999999887554   37889999999999999999999999988764321  


Q ss_pred             CCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHhhcC
Q 019878           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEG  160 (334)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g  160 (334)
                       +.+   .......+.+++..+.. +++|++.++.++.-.-.++....+.+..|    ...|...+..+|.+-.--...+
T Consensus        76 -~~~---~~~~k~~~~li~~l~~a-gv~RllVVGGAGSL~id~g~rLvD~p~fP----~ey~~~A~~~ae~L~~Lr~~~~  146 (211)
T COG2910          76 -DND---ELHSKSIEALIEALKGA-GVPRLLVVGGAGSLEIDEGTRLVDTPDFP----AEYKPEALAQAEFLDSLRAEKS  146 (211)
T ss_pred             -Chh---HHHHHHHHHHHHHHhhc-CCeeEEEEcCccceEEcCCceeecCCCCc----hhHHHHHHHHHHHHHHHhhccC
Confidence             111   22233467788888887 78999988865543322222222222222    2446777777774433322346


Q ss_pred             CCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCC-CCeE
Q 019878          161 LPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRS-GERY  231 (334)
Q Consensus       161 ~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~-g~~~  231 (334)
                      ++||.+-|+.+|-||++. ++        ...|+...+.+.  .--++|...|.|-|++.-++++.. .+.|
T Consensus       147 l~WTfvSPaa~f~PGerT-g~--------yrlggD~ll~n~--~G~SrIS~aDYAiA~lDe~E~~~h~rqRf  207 (211)
T COG2910         147 LDWTFVSPAAFFEPGERT-GN--------YRLGGDQLLVNA--KGESRISYADYAIAVLDELEKPQHIRQRF  207 (211)
T ss_pred             cceEEeCcHHhcCCcccc-Cc--------eEeccceEEEcC--CCceeeeHHHHHHHHHHHHhcccccceee
Confidence            999999999999998753 22        112333333322  223789999999999999998753 4444

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.76  E-value=2.6e-17  Score=142.19  Aligned_cols=211  Identities=17%  Similarity=0.160  Sum_probs=143.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC---CCCC-CCCeEEEEcCCCChhhHHHHhc-------CCCEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS---GLPS-EGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vi   70 (334)
                      +++||||+|+||+++++.|+++|++|++++|+.....   .+.. ..++.++.+|+.+.+++.++++       .+|+||
T Consensus         8 ~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~vi   87 (263)
T PRK08226          8 TALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILV   87 (263)
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            5999999999999999999999999999999763111   1110 1257889999999988877764       479999


Q ss_pred             EeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEeccccee-ccCCCccCCCCCccccccccC
Q 019878           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFAL-GSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        71 h~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~-~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      |+||....      ..++.+..++.|+.++..+++++.+.   ....++|++||.... ....              ...
T Consensus        88 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~~~  153 (263)
T PRK08226         88 NNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADP--------------GET  153 (263)
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCC--------------Ccc
Confidence            99997322      11223446889999999999987643   134689999986431 1111              135


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCc-----hhHHHHHHHHHHcCCCCccccCCCCceeeeeH
Q 019878          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTT-----GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHV  211 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  211 (334)
                      .|+.+|.+.+.+.+.+.    +.|+++..++|+.+.++.....     .......+.....+ .        ....+...
T Consensus       154 ~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~--------p~~~~~~~  224 (263)
T PRK08226        154 AYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKA-I--------PLRRLADP  224 (263)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhcc-C--------CCCCCCCH
Confidence            69999999998887765    3489999999999987631100     00011112222211 1        11235679


Q ss_pred             HHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          212 DDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       212 ~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +|+++++..++...   ..|+++.+.|
T Consensus       225 ~~va~~~~~l~~~~~~~~~g~~i~~dg  251 (263)
T PRK08226        225 LEVGELAAFLASDESSYLTGTQNVIDG  251 (263)
T ss_pred             HHHHHHHHHHcCchhcCCcCceEeECC
Confidence            99999998887542   2577777753

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.76  E-value=7e-18  Score=145.74  Aligned_cols=210  Identities=19%  Similarity=0.163  Sum_probs=144.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CC-CCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+++.....    .. ..++.++.+|++|.+++.++++       ++|+|
T Consensus        11 ~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD~v   90 (264)
T PRK07576         11 NVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPIDVL   90 (264)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            599999999999999999999999999999976542211    11 1256789999999988877664       37999


Q ss_pred             EEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC--CCcEEEEecccceeccCCCccCCCCCccccccccCh
Q 019878           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (334)
Q Consensus        70 ih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  141 (334)
                      ||+||....      ..+++...+++|+.++.++++++.+..  ...++|++||...+.+..              ..+.
T Consensus        91 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~--------------~~~~  156 (264)
T PRK07576         91 VSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMP--------------MQAH  156 (264)
T ss_pred             EECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCC--------------CccH
Confidence            999985321      112344567899999999999887531  125999999976543221              1367


Q ss_pred             HHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHH-HHHHHHHcCCCCccccCCCCceeeeeHHHHHH
Q 019878          142 YERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVA-KLMIERFNGRLPGYIGYGNDRFSFCHVDDVVD  216 (334)
Q Consensus       142 Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  216 (334)
                      |+.+|.+.+.+.+.+.    .+|++++.++|+.+.+....  ..... ...........        ....+...+|+++
T Consensus       157 Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~--~~~~~~~~~~~~~~~~~--------~~~~~~~~~dva~  226 (264)
T PRK07576        157 VCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGM--ARLAPSPELQAAVAQSV--------PLKRNGTKQDIAN  226 (264)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHH--hhcccCHHHHHHHHhcC--------CCCCCCCHHHHHH
Confidence            9999999999888754    35899999999988753210  00000 01111111111        1224667999999


Q ss_pred             HHHHHhhcC---CCCCeEEecC
Q 019878          217 GHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       217 a~~~~~~~~---~~g~~~~i~g  235 (334)
                      ++..++...   ..|..+.+.|
T Consensus       227 ~~~~l~~~~~~~~~G~~~~~~g  248 (264)
T PRK07576        227 AALFLASDMASYITGVVLPVDG  248 (264)
T ss_pred             HHHHHcChhhcCccCCEEEECC
Confidence            999999753   2577777754

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.76  E-value=7.1e-17  Score=138.86  Aligned_cols=205  Identities=17%  Similarity=0.156  Sum_probs=142.8

Q ss_pred             cEEEEcCCC--hhhHHHHHHHHhCCCeEEEEEcCCCCC---------C------CCC-CCCCeEEEEcCCCChhhHHHHh
Q 019878            2 KILVSGASG--YLGGRLCHALLKQGHSVRALVRRTSDI---------S------GLP-SEGALELVYGDVTDYRSLVDAC   63 (334)
Q Consensus         2 ~ilItG~tG--~iG~~l~~~L~~~g~~V~~~~r~~~~~---------~------~~~-~~~~v~~~~~Dl~d~~~~~~~~   63 (334)
                      +||||||+|  .||.+++++|+++|++|++++|++.+.         .      .+. ...+++++.+|+++.+++..++
T Consensus         7 ~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   86 (256)
T PRK12748          7 IALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPNRVF   86 (256)
T ss_pred             EEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence            599999996  699999999999999999999873211         0      000 0125899999999998876655


Q ss_pred             c-------CCCEEEEeccccCC--C----CCCcccchhhhhHHHHHHHHHHHhcC---CCcEEEEecccceeccCCCccC
Q 019878           64 F-------GCHVIFHTAALVEP--W----LPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIA  127 (334)
Q Consensus        64 ~-------~~d~vih~a~~~~~--~----~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~~~~~  127 (334)
                      +       .+|+|||+||....  .    .++++..+++|+.++..+++++.+..   ..+++|++||...+++..+   
T Consensus        87 ~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~---  163 (256)
T PRK12748         87 YAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMPD---  163 (256)
T ss_pred             HHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCCCC---
Confidence            3       47999999987322  1    12345578999999999999986531   3458999999876654321   


Q ss_pred             CCCCccccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCC
Q 019878          128 DENQVHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGN  203 (334)
Q Consensus       128 ~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (334)
                                 ...|+.+|++.+.+++.+.    ..|++++.++|+.+..+...   .   . .........+       
T Consensus       164 -----------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~---~---~-~~~~~~~~~~-------  218 (256)
T PRK12748        164 -----------ELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWIT---E---E-LKHHLVPKFP-------  218 (256)
T ss_pred             -----------chHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCC---h---h-HHHhhhccCC-------
Confidence                       2569999999999888754    35899999999988665321   0   1 1111111111       


Q ss_pred             CceeeeeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          204 DRFSFCHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       204 ~~~~~i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                       ...+...+|+++++..++...   ..|.++++.+
T Consensus       219 -~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~  252 (256)
T PRK12748        219 -QGRVGEPVDAARLIAFLVSEEAKWITGQVIHSEG  252 (256)
T ss_pred             -CCCCcCHHHHHHHHHHHhCcccccccCCEEEecC
Confidence             012345799999999887653   2588888853

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.75  E-value=7.9e-17  Score=138.32  Aligned_cols=210  Identities=14%  Similarity=0.146  Sum_probs=145.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC--CCCCC-CCCeEEEEcCCCChhhHHHHhc-------CCCEEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI--SGLPS-EGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih   71 (334)
                      ++|||||+|.||.++++.|+++|++|++++++....  ..+.. ...+.++.+|++|.+++.++++       ++|++||
T Consensus        12 ~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~li~   91 (253)
T PRK08993         12 VAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDILVN   91 (253)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence            489999999999999999999999999887754211  11111 1257889999999988877764       4899999


Q ss_pred             eccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC----CCcEEEEecccceeccCCCccCCCCCccccccccCh
Q 019878           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (334)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  141 (334)
                      +||....      ..+++...+++|+.++.++++++....    .-.++|++||...+.+...              ...
T Consensus        92 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~  157 (253)
T PRK08993         92 NAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIR--------------VPS  157 (253)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCC--------------Ccc
Confidence            9997432      123456788999999999999886541    1258999999877754322              245


Q ss_pred             HHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHH
Q 019878          142 YERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDG  217 (334)
Q Consensus       142 Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  217 (334)
                      |+.+|.+.+.+.+.+.    ++|+++..++||.+-.+....... -........ ...+        ..-+.-.+|++++
T Consensus       158 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~-~~~~~~~~~-~~~p--------~~r~~~p~eva~~  227 (253)
T PRK08993        158 YTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRA-DEQRSAEIL-DRIP--------AGRWGLPSDLMGP  227 (253)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhcc-chHHHHHHH-hcCC--------CCCCcCHHHHHHH
Confidence            9999999888887654    458999999999997653210000 001111111 1111        1126678999999


Q ss_pred             HHHHhhcCC---CCCeEEecC
Q 019878          218 HIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       218 ~~~~~~~~~---~g~~~~i~g  235 (334)
                      +..++....   .|.++.+.|
T Consensus       228 ~~~l~s~~~~~~~G~~~~~dg  248 (253)
T PRK08993        228 VVFLASSASDYINGYTIAVDG  248 (253)
T ss_pred             HHHHhCccccCccCcEEEECC
Confidence            999987542   577766643

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.75  E-value=4e-17  Score=140.70  Aligned_cols=213  Identities=17%  Similarity=0.146  Sum_probs=140.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CCCCCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      |++|||||+|.||+++++.|+++|++|++++|+++....    +....++.++.+|++|.+++.++++       ++|+|
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l   80 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL   80 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            899999999999999999999999999999998654221    1112357889999999998877663       48999


Q ss_pred             EEeccccCC-----CCC---CcccchhhhhHHHHHHHHHH----HhcCCCcEEEEecccceeccCCCccCCCCCcccccc
Q 019878           70 FHTAALVEP-----WLP---DPSRFFAVNVEGLKNVVQAA----KETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        70 ih~a~~~~~-----~~~---~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~  137 (334)
                      ||+||....     .+.   +....+.+|+.++..+...+    .+..+..++|++||.....+.+.             
T Consensus        81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~-------------  147 (259)
T PRK08340         81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPP-------------  147 (259)
T ss_pred             EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCC-------------
Confidence            999996421     111   22234567777765554443    22223468999999866532211             


Q ss_pred             ccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhH--------HHHHHHHHHcCCCCccccCCCCc
Q 019878          138 FCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNL--------VAKLMIERFNGRLPGYIGYGNDR  205 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~  205 (334)
                       ...|+.+|...+.+.+.+.    ++|+++..+.||.+-.+........        .............+        .
T Consensus       148 -~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--------~  218 (259)
T PRK08340        148 -LVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTP--------L  218 (259)
T ss_pred             -chHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCC--------c
Confidence             2569999998888887754    3589999999998866532100000        00000011111111        1


Q ss_pred             eeeeeHHHHHHHHHHHhhcCC---CCCeEEecC
Q 019878          206 FSFCHVDDVVDGHIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       206 ~~~i~v~D~a~a~~~~~~~~~---~g~~~~i~g  235 (334)
                      .-+...+|+++++..++....   .|.+..+.|
T Consensus       219 ~r~~~p~dva~~~~fL~s~~~~~itG~~i~vdg  251 (259)
T PRK08340        219 KRTGRWEELGSLIAFLLSENAEYMLGSTIVFDG  251 (259)
T ss_pred             cCCCCHHHHHHHHHHHcCcccccccCceEeecC
Confidence            236678999999999987532   577777743

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.75  E-value=2.1e-17  Score=143.41  Aligned_cols=200  Identities=18%  Similarity=0.157  Sum_probs=135.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CC--CCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS--EGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      |+++||||+|+||.++++.|+++|++|++++|+.+.....    ..  ...+.++.+|+.|.+++.++++       ++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            6899999999999999999999999999999876432111    11  0124567899999988766554       379


Q ss_pred             EEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc----CCCcEEEEecccceeccCCCccCCCCCcccccc
Q 019878           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        68 ~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~  137 (334)
                      +|||+||....      ..++....+++|+.++.++++++...    +...++|++||...+.+.+              
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~--------------  146 (272)
T PRK07832         81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALP--------------  146 (272)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCC--------------
Confidence            99999986321      11234567899999999999997542    1235899999975432221              


Q ss_pred             ccChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCch----hHHHHHHHHHHcCCCCccccCCCCceeee
Q 019878          138 FCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTG----NLVAKLMIERFNGRLPGYIGYGNDRFSFC  209 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  209 (334)
                      ....|+.+|.+.+.+.+.+    .++|+++++++||.+.++......    +.-........ .         ......+
T Consensus       147 ~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~  216 (272)
T PRK07832        147 WHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWV-D---------RFRGHAV  216 (272)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHH-H---------hcccCCC
Confidence            1356999999766655543    356899999999999887421100    00000000000 0         0011347


Q ss_pred             eHHHHHHHHHHHhhc
Q 019878          210 HVDDVVDGHIAAMEK  224 (334)
Q Consensus       210 ~v~D~a~a~~~~~~~  224 (334)
                      ..+|+|++++.++.+
T Consensus       217 ~~~~vA~~~~~~~~~  231 (272)
T PRK07832        217 TPEKAAEKILAGVEK  231 (272)
T ss_pred             CHHHHHHHHHHHHhc
Confidence            899999999999964

>PRK06484 short chain dehydrogenase; Validated

Probab=99.75  E-value=1.8e-17  Score=156.97  Aligned_cols=212  Identities=19%  Similarity=0.193  Sum_probs=149.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      ++|||||+|.||.++++.|+++|++|++++|+.++...+..  ...+..+.+|++|.+++.++++       .+|++||+
T Consensus       271 ~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~n  350 (520)
T PRK06484        271 VVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVLVNN  350 (520)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            58999999999999999999999999999997654322211  1256778999999998877664       38999999


Q ss_pred             ccccCC-------CCCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCccccccccChHHH
Q 019878           73 AALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (334)
Q Consensus        73 a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (334)
                      ||....       ..++++..+++|+.++.++++++.... ...++|++||...+.....              ...|+.
T Consensus       351 Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~a  416 (520)
T PRK06484        351 AGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPP--------------RNAYCA  416 (520)
T ss_pred             CCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCC--------------CchhHH
Confidence            997421       112345678999999999999988753 2358999999766543221              366999


Q ss_pred             HHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHH
Q 019878          145 SKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIA  220 (334)
Q Consensus       145 sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~  220 (334)
                      +|+..+.+.+.+.    ++|+++..+.|+.+.++........-......... ..+        ...+..++|+++++..
T Consensus       417 sKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~-~~~--------~~~~~~~~dia~~~~~  487 (520)
T PRK06484        417 SKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRR-RIP--------LGRLGDPEEVAEAIAF  487 (520)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHh-cCC--------CCCCcCHHHHHHHHHH
Confidence            9999998887754    35899999999999876421100000001111111 111        1124679999999999


Q ss_pred             HhhcC---CCCCeEEecCC
Q 019878          221 AMEKG---RSGERYLLTGE  236 (334)
Q Consensus       221 ~~~~~---~~g~~~~i~g~  236 (334)
                      ++...   ..|+++.+.|.
T Consensus       488 l~s~~~~~~~G~~i~vdgg  506 (520)
T PRK06484        488 LASPAASYVNGATLTVDGG  506 (520)
T ss_pred             HhCccccCccCcEEEECCC
Confidence            98753   35888888643

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.75  E-value=5.2e-17  Score=136.67  Aligned_cols=195  Identities=18%  Similarity=0.161  Sum_probs=141.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHh---c--CCCEEEEecccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC---F--GCHVIFHTAALV   76 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~---~--~~d~vih~a~~~   76 (334)
                      +++||||+|+||+++++.|+++|++|++++|++.....+... +++++.+|++|.+.+.+++   .  ++|+|||++|..
T Consensus         3 ~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~~   81 (222)
T PRK06953          3 TVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQAL-GAEALALDVADPASVAGLAWKLDGEALDAAVYVAGVY   81 (222)
T ss_pred             eEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhc-cceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCcc
Confidence            699999999999999999999999999999987654443332 5678999999998887754   2  389999999975


Q ss_pred             CC--------CCCCcccchhhhhHHHHHHHHHHHhcC--CCcEEEEecccc-eeccCCCccCCCCCccccccccChHHHH
Q 019878           77 EP--------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFF-ALGSTDGYIADENQVHEEKYFCTQYERS  145 (334)
Q Consensus        77 ~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~-v~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (334)
                      ..        ..++++..++.|+.++.++++++.+..  ...++|++||.. .++.....            ....|+.+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~------------~~~~Y~~s  149 (222)
T PRK06953         82 GPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATGT------------TGWLYRAS  149 (222)
T ss_pred             cCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccCC------------CccccHHh
Confidence            21        122356689999999999999997631  124789988854 44432110            01359999


Q ss_pred             HHHHHHHHHHHhh--cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhh
Q 019878          146 KAVADKIALQAAS--EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAME  223 (334)
Q Consensus       146 K~~~E~~~~~~~~--~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~  223 (334)
                      |...+.+++.+..  .++++..++|+.+..+...               .            ...+..++.++.+..++.
T Consensus       150 K~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~---------------~------------~~~~~~~~~~~~~~~~~~  202 (222)
T PRK06953        150 KAALNDALRAASLQARHATCIALHPGWVRTDMGG---------------A------------QAALDPAQSVAGMRRVIA  202 (222)
T ss_pred             HHHHHHHHHHHhhhccCcEEEEECCCeeecCCCC---------------C------------CCCCCHHHHHHHHHHHHH
Confidence            9999999988764  3789999999998765310               0            013467888888888766


Q ss_pred             cCC---CCCeEEecCC
Q 019878          224 KGR---SGERYLLTGE  236 (334)
Q Consensus       224 ~~~---~g~~~~i~g~  236 (334)
                      ...   .+.+|...++
T Consensus       203 ~~~~~~~~~~~~~~~~  218 (222)
T PRK06953        203 QATRRDNGRFFQYDGV  218 (222)
T ss_pred             hcCcccCceEEeeCCc
Confidence            532   3445555443

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.75  E-value=2.3e-17  Score=142.53  Aligned_cols=194  Identities=20%  Similarity=0.235  Sum_probs=136.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CCCCCeEEEEcCCCChhhHHHHhc------CCCEEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PSEGALELVYGDVTDYRSLVDACF------GCHVIFH   71 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~v~~~~~Dl~d~~~~~~~~~------~~d~vih   71 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+++....+    ....++.++.+|+.|.+++.++++      .+|+|||
T Consensus         7 ~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~lv~   86 (263)
T PRK09072          7 RVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINVLIN   86 (263)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCEEEE
Confidence            499999999999999999999999999999986543221    112368899999999988776654      4799999


Q ss_pred             eccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChH
Q 019878           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (334)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y  142 (334)
                      +||....      ..++....+++|+.++.++++.+.+.   ....++|++||...+.+..+              .+.|
T Consensus        87 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~~~Y  152 (263)
T PRK09072         87 NAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPG--------------YASY  152 (263)
T ss_pred             CCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCC--------------ccHH
Confidence            9997432      11223457789999999999998653   13457999988654322111              2669


Q ss_pred             HHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHH
Q 019878          143 ERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGH  218 (334)
Q Consensus       143 ~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  218 (334)
                      +.+|.+.+.+.+.+.    .+|++++.+.|+.+.++...       ... ......         ....+..++|+|+++
T Consensus       153 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~-------~~~-~~~~~~---------~~~~~~~~~~va~~i  215 (263)
T PRK09072        153 CASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNS-------EAV-QALNRA---------LGNAMDDPEDVAAAV  215 (263)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchh-------hhc-cccccc---------ccCCCCCHHHHHHHH
Confidence            999998877776654    45899999999988654311       000 000000         011356789999999


Q ss_pred             HHHhhcCC
Q 019878          219 IAAMEKGR  226 (334)
Q Consensus       219 ~~~~~~~~  226 (334)
                      ..++++..
T Consensus       216 ~~~~~~~~  223 (263)
T PRK09072        216 LQAIEKER  223 (263)
T ss_pred             HHHHhCCC
Confidence            99998753

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.74  E-value=4.3e-17  Score=140.80  Aligned_cols=211  Identities=19%  Similarity=0.148  Sum_probs=145.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      ++|||||+|+||.++++.|+++|++|++++|++++...+..  ..++.++.+|++|.+++.++++       .+|++||+
T Consensus         8 ~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~   87 (263)
T PRK06200          8 VALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCFVGN   87 (263)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            59999999999999999999999999999998654332211  1257889999999988776654       48999999


Q ss_pred             ccccCC--C--C---CC----cccchhhhhHHHHHHHHHHHhcC--CCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           73 AALVEP--W--L---PD----PSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        73 a~~~~~--~--~---~~----~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      ||....  .  .   ++    ++..+++|+.++..+++++.+..  .-.++|++||...+.+...              .
T Consensus        88 ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--------------~  153 (263)
T PRK06200         88 AGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGG--------------G  153 (263)
T ss_pred             CCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCC--------------C
Confidence            997321  1  1   11    34567899999999998887541  1247999999876643321              2


Q ss_pred             ChHHHHHHHHHHHHHHHhh---cCCCEEEEecCceecCCCCCch--------hHHHHHHHHHHcCCCCccccCCCCceee
Q 019878          140 TQYERSKAVADKIALQAAS---EGLPIVPVYPGVIYGPGKLTTG--------NLVAKLMIERFNGRLPGYIGYGNDRFSF  208 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~~---~g~~~~ilR~~~v~G~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (334)
                      ..|+.+|.+.+.+.+.+..   .++++..+.||.+..+......        ...... ........        ...-+
T Consensus       154 ~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--------p~~r~  224 (263)
T PRK06200        154 PLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGL-ADMIAAIT--------PLQFA  224 (263)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccch-hHHhhcCC--------CCCCC
Confidence            5699999999998887653   2599999999999765321000        000000 11111111        11236


Q ss_pred             eeHHHHHHHHHHHhhcC----CCCCeEEecC
Q 019878          209 CHVDDVVDGHIAAMEKG----RSGERYLLTG  235 (334)
Q Consensus       209 i~v~D~a~a~~~~~~~~----~~g~~~~i~g  235 (334)
                      ...+|+++++..++...    ..|.++.+.|
T Consensus       225 ~~~~eva~~~~fl~s~~~~~~itG~~i~vdg  255 (263)
T PRK06200        225 PQPEDHTGPYVLLASRRNSRALTGVVINADG  255 (263)
T ss_pred             CCHHHHhhhhhheecccccCcccceEEEEcC
Confidence            67899999999988644    2577777753

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.74  E-value=5.5e-17  Score=140.40  Aligned_cols=210  Identities=18%  Similarity=0.172  Sum_probs=144.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~a~   74 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+......    .++.++.+|++|.+.+.++++       .+|+|||+||
T Consensus        11 ~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag   86 (266)
T PRK06171         11 IIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH----ENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAG   86 (266)
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc----CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence            59999999999999999999999999999998765432    268899999999988877664       4799999999


Q ss_pred             ccCC---------------CCCCcccchhhhhHHHHHHHHHHHhcC---CCcEEEEecccceeccCCCccCCCCCccccc
Q 019878           75 LVEP---------------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (334)
Q Consensus        75 ~~~~---------------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~  136 (334)
                      ....               ..++++..+++|+.++..+++++.+..   ...++|++||...+.....            
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------  154 (266)
T PRK06171         87 INIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEG------------  154 (266)
T ss_pred             ccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCC------------
Confidence            6321               112234578899999999999987642   2358999999766543221            


Q ss_pred             cccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceec-CCCCC-chhHH-------HHHHHHHHcCCCCccccCCC
Q 019878          137 YFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYG-PGKLT-TGNLV-------AKLMIERFNGRLPGYIGYGN  203 (334)
Q Consensus       137 ~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G-~~~~~-~~~~~-------~~~~~~~~~~~~~~~~~~~~  203 (334)
                        .+.|+.+|.+.+.+.+.+.    ++|+++..++||.+-. +.... ....+       ...+........      ..
T Consensus       155 --~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~  226 (266)
T PRK06171        155 --QSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTS------TI  226 (266)
T ss_pred             --CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccc------cc
Confidence              2669999999988887754    3589999999998842 21100 00000       000111111100      00


Q ss_pred             CceeeeeHHHHHHHHHHHhhcCC---CCCeEEecC
Q 019878          204 DRFSFCHVDDVVDGHIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       204 ~~~~~i~v~D~a~a~~~~~~~~~---~g~~~~i~g  235 (334)
                      ....+...+|+++++..++....   .|.+.++.|
T Consensus       227 p~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdg  261 (266)
T PRK06171        227 PLGRSGKLSEVADLVCYLLSDRASYITGVTTNIAG  261 (266)
T ss_pred             cCCCCCCHHHhhhheeeeeccccccceeeEEEecC
Confidence            11235678999999999887532   577777753

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.74  E-value=3.8e-17  Score=138.96  Aligned_cols=203  Identities=17%  Similarity=0.112  Sum_probs=141.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CCCCCeEEEEcCCCChhhHHHHhc-------CCCEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PSEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vi   70 (334)
                      +||||||+|+||+++++.|+++|++|++++|++.....+    ....+++++.+|+.+.+.+.++++       .+|.+|
T Consensus         7 ~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ii   86 (238)
T PRK05786          7 KVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAIDGLV   86 (238)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            699999999999999999999999999999987543222    111257899999999988877654       369999


Q ss_pred             EeccccCC----CCCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccce-eccCCCccCCCCCccccccccChHHH
Q 019878           71 HTAALVEP----WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFA-LGSTDGYIADENQVHEEKYFCTQYER  144 (334)
Q Consensus        71 h~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v-~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (334)
                      |+++....    ..++....++.|+.+...+++.+.+.. ...++|++||... ++...              +...|+.
T Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~--------------~~~~Y~~  152 (238)
T PRK05786         87 VTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKASP--------------DQLSYAV  152 (238)
T ss_pred             EcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCCC--------------CchHHHH
Confidence            99985321    112234567899999888888887641 1247999998654 22111              1356999


Q ss_pred             HHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHH
Q 019878          145 SKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIA  220 (334)
Q Consensus       145 sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~  220 (334)
                      +|.+.+..++.+.    .+|++++++||++++++....  .    .... .    .   .   ....++..+|+++++..
T Consensus       153 sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~--~----~~~~-~----~---~---~~~~~~~~~~va~~~~~  215 (238)
T PRK05786        153 AKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPE--R----NWKK-L----R---K---LGDDMAPPEDFAKVIIW  215 (238)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCch--h----hhhh-h----c---c---ccCCCCCHHHHHHHHHH
Confidence            9998887777654    348999999999999874211  0    0000 0    0   0   01125668999999999


Q ss_pred             HhhcCC---CCCeEEecC
Q 019878          221 AMEKGR---SGERYLLTG  235 (334)
Q Consensus       221 ~~~~~~---~g~~~~i~g  235 (334)
                      ++..+.   .|..+.+.|
T Consensus       216 ~~~~~~~~~~g~~~~~~~  233 (238)
T PRK05786        216 LLTDEADWVDGVVIPVDG  233 (238)
T ss_pred             HhcccccCccCCEEEECC
Confidence            987532   466766643

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.74  E-value=8.7e-17  Score=139.59  Aligned_cols=194  Identities=17%  Similarity=0.192  Sum_probs=135.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC------------CCCCeEEEEcCCCChhhHHHHhc-----
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP------------SEGALELVYGDVTDYRSLVDACF-----   64 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------------~~~~v~~~~~Dl~d~~~~~~~~~-----   64 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+.+....+.            ...++.++.+|+++.+++.++++     
T Consensus         8 ~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   87 (273)
T PRK08278          8 TLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAVER   87 (273)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            5999999999999999999999999999999865422111            01257889999999998877764     


Q ss_pred             --CCCEEEEeccccCC--C----CCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcc
Q 019878           65 --GCHVIFHTAALVEP--W----LPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVH  133 (334)
Q Consensus        65 --~~d~vih~a~~~~~--~----~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~  133 (334)
                        ++|+|||+||....  .    .++.+..+++|+.++.++++++...   ..-.++|++||.....+.         ..
T Consensus        88 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~---------~~  158 (273)
T PRK08278         88 FGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPK---------WF  158 (273)
T ss_pred             hCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcccc---------cc
Confidence              58999999997432  1    1234567889999999999999754   123488888875322110         00


Q ss_pred             ccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeee
Q 019878          134 EEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFC  209 (334)
Q Consensus       134 ~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  209 (334)
                         ++.+.|+.+|.+.|.+.+.+.    ++|+++..+.|+.+...      ..    ......+.        .....+.
T Consensus       159 ---~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t------~~----~~~~~~~~--------~~~~~~~  217 (273)
T PRK08278        159 ---APHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIAT------AA----VRNLLGGD--------EAMRRSR  217 (273)
T ss_pred             ---CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCcccc------HH----HHhccccc--------ccccccC
Confidence               123679999999999988765    34899999999843221      11    11111111        1122366


Q ss_pred             eHHHHHHHHHHHhhcC
Q 019878          210 HVDDVVDGHIAAMEKG  225 (334)
Q Consensus       210 ~v~D~a~a~~~~~~~~  225 (334)
                      ..+|+++++..++...
T Consensus       218 ~p~~va~~~~~l~~~~  233 (273)
T PRK08278        218 TPEIMADAAYEILSRP  233 (273)
T ss_pred             CHHHHHHHHHHHhcCc
Confidence            7999999999998764

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.74  E-value=3.5e-17  Score=143.71  Aligned_cols=202  Identities=20%  Similarity=0.216  Sum_probs=141.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vi   70 (334)
                      ++|||||+|.||.++++.|.++|++|++++|+.+....    +.....+..+.+|++|.+++.++++       ++|+||
T Consensus        11 ~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~vI   90 (296)
T PRK05872         11 VVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGIDVVV   90 (296)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            59999999999999999999999999999998654322    1111245667799999988877653       489999


Q ss_pred             EeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC--CCcEEEEecccceeccCCCccCCCCCccccccccChH
Q 019878           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (334)
Q Consensus        71 h~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y  142 (334)
                      |+||....      ..++.+..+++|+.++.++++.+....  ...++|++||...+...+.              ...|
T Consensus        91 ~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y  156 (296)
T PRK05872         91 ANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPG--------------MAAY  156 (296)
T ss_pred             ECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCC--------------chHH
Confidence            99997432      112345678899999999999986531  2358999999877654332              2569


Q ss_pred             HHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHH
Q 019878          143 ERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGH  218 (334)
Q Consensus       143 ~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  218 (334)
                      +.+|...+.+.+.+.    .+|+.+.++.|+.+..+........ ...+.... +..+.      ....++..+|+++++
T Consensus       157 ~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~-~~~~~~~~-~~~~~------p~~~~~~~~~va~~i  228 (296)
T PRK05872        157 CASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADAD-LPAFRELR-ARLPW------PLRRTTSVEKCAAAF  228 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhcccc-chhHHHHH-hhCCC------cccCCCCHHHHHHHH
Confidence            999999988887654    4689999999999876532110000 01111111 11110      112456799999999


Q ss_pred             HHHhhcC
Q 019878          219 IAAMEKG  225 (334)
Q Consensus       219 ~~~~~~~  225 (334)
                      ..++...
T Consensus       229 ~~~~~~~  235 (296)
T PRK05872        229 VDGIERR  235 (296)
T ss_pred             HHHHhcC
Confidence            9998864

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.74  E-value=3.2e-17  Score=138.23  Aligned_cols=162  Identities=22%  Similarity=0.212  Sum_probs=121.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc-----CCCEEEEecccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-----GCHVIFHTAALV   76 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----~~d~vih~a~~~   76 (334)
                      +++||||+|+||+++++.|+++|++|++++|++.+...+....++.++.+|+.|.+++.++++     ++|+|||+||..
T Consensus         3 ~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag~~   82 (225)
T PRK08177          3 TALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAGIS   82 (225)
T ss_pred             EEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCccc
Confidence            599999999999999999999999999999987655433333467889999999988877665     489999999874


Q ss_pred             CC--------CCCCcccchhhhhHHHHHHHHHHHhcC--CCcEEEEecccceeccCCCccCCCCCccccccccChHHHHH
Q 019878           77 EP--------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (334)
Q Consensus        77 ~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK  146 (334)
                      ..        ...+....+.+|+.++.++++++.+..  ...+++++||.  +|.....+         ......|+.+|
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~--~g~~~~~~---------~~~~~~Y~~sK  151 (225)
T PRK08177         83 GPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQ--LGSVELPD---------GGEMPLYKASK  151 (225)
T ss_pred             CCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccC--ccccccCC---------CCCccchHHHH
Confidence            22        112345577899999999999886542  22478888874  33221100         01124699999


Q ss_pred             HHHHHHHHHHh----hcCCCEEEEecCceecC
Q 019878          147 AVADKIALQAA----SEGLPIVPVYPGVIYGP  174 (334)
Q Consensus       147 ~~~E~~~~~~~----~~g~~~~ilR~~~v~G~  174 (334)
                      .+.+.+.+.+.    .+++++..++||.+-.+
T Consensus       152 ~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~  183 (225)
T PRK08177        152 AALNSMTRSFVAELGEPTLTVLSMHPGWVKTD  183 (225)
T ss_pred             HHHHHHHHHHHHHhhcCCeEEEEEcCCceecC
Confidence            99999988765    34799999999988655

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.74  E-value=1.6e-16  Score=135.19  Aligned_cols=206  Identities=18%  Similarity=0.176  Sum_probs=141.3

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC-CCC----CC-CCCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         3 ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~----~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ||||||+|+||.++++.|.++|++|++++|+... ...    +. ...++.++.+|+.|.+++.++++       ..|.+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6899999999999999999999999999876432 111    11 11368899999999998877654       37999


Q ss_pred             EEeccccCC------CCCCcccchhhhhHHHHHHHHHHH----hcCCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAK----ETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        70 ih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      ||+||....      ..+++...+++|+.++.++++++.    +.....++|++||...+.+.+.              .
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~--------------~  146 (239)
T TIGR01831        81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRG--------------Q  146 (239)
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCC--------------C
Confidence            999996432      223456688999999999988763    1123468999999654432221              2


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      ..|+.+|.+.+.+.+.+.    ++|++++.++|+.+.++....    ........... .+        ...+...+|++
T Consensus       147 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~~~~~-~~--------~~~~~~~~~va  213 (239)
T TIGR01831       147 VNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAE----VEHDLDEALKT-VP--------MNRMGQPAEVA  213 (239)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchh----hhHHHHHHHhc-CC--------CCCCCCHHHHH
Confidence            569999998877776653    458999999999998764321    11111111111 11        11245689999


Q ss_pred             HHHHHHhhcCC---CCCeEEecC
Q 019878          216 DGHIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       216 ~a~~~~~~~~~---~g~~~~i~g  235 (334)
                      +++..++....   .|....+.|
T Consensus       214 ~~~~~l~~~~~~~~~g~~~~~~g  236 (239)
T TIGR01831       214 SLAGFLMSDGASYVTRQVISVNG  236 (239)
T ss_pred             HHHHHHcCchhcCccCCEEEecC
Confidence            99999987532   466655543

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.73  E-value=2.7e-16  Score=135.72  Aligned_cols=209  Identities=20%  Similarity=0.117  Sum_probs=144.3

Q ss_pred             cEEEEcCCC-hhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CC---CCCeEEEEcCCCChhhHHHHhc-------CC
Q 019878            2 KILVSGASG-YLGGRLCHALLKQGHSVRALVRRTSDISGL----PS---EGALELVYGDVTDYRSLVDACF-------GC   66 (334)
Q Consensus         2 ~ilItG~tG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~---~~~v~~~~~Dl~d~~~~~~~~~-------~~   66 (334)
                      ++|||||+| .||.++++.|+++|++|++++|+.++.+..    ..   ..++.++.+|+.+.+.+.++++       .+
T Consensus        19 ~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   98 (262)
T PRK07831         19 VVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERLGRL   98 (262)
T ss_pred             EEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            699999998 699999999999999999999876543211    10   1257889999999988877664       47


Q ss_pred             CEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC---C-CcEEEEecccceeccCCCccCCCCCccccc
Q 019878           67 HVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---T-VEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (334)
Q Consensus        67 d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~  136 (334)
                      |+|||+||....      ..+++...+++|+.++..+++.+.+..   . -.++|++||...+....             
T Consensus        99 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~-------------  165 (262)
T PRK07831         99 DVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQH-------------  165 (262)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCC-------------
Confidence            999999996321      112345567899999999888876531   1 35889988865432211             


Q ss_pred             cccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHH
Q 019878          137 YFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVD  212 (334)
Q Consensus       137 ~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  212 (334)
                       +...|+.+|.+.+.+.+.+.    ++|+++..++|+.+..+......  ....+..... ..+        ...+...+
T Consensus       166 -~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~--~~~~~~~~~~-~~~--------~~r~~~p~  233 (262)
T PRK07831        166 -GQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVT--SAELLDELAA-REA--------FGRAAEPW  233 (262)
T ss_pred             -CCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccccc--CHHHHHHHHh-cCC--------CCCCcCHH
Confidence             13569999999999888765    35899999999999887421110  0112222111 111        11255689


Q ss_pred             HHHHHHHHHhhcC---CCCCeEEecC
Q 019878          213 DVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       213 D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      |+++++..++...   -.|+++.+.+
T Consensus       234 ~va~~~~~l~s~~~~~itG~~i~v~~  259 (262)
T PRK07831        234 EVANVIAFLASDYSSYLTGEVVSVSS  259 (262)
T ss_pred             HHHHHHHHHcCchhcCcCCceEEeCC
Confidence            9999999988754   2577777643

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.72  E-value=2.7e-16  Score=133.92  Aligned_cols=180  Identities=17%  Similarity=0.154  Sum_probs=124.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCC-CCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCC--
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP--   78 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~--   78 (334)
                      +++||||+|+||+++++.|+++|++|++++|+.. ....... ....++.+|++|.+++.+.+.++|++||+||....  
T Consensus        16 ~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~~~~~~   94 (245)
T PRK12367         16 RIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDE-SPNEWIKWECGKEESLDKQLASLDVLILNHGINPGGR   94 (245)
T ss_pred             EEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhcc-CCCeEEEeeCCCHHHHHHhcCCCCEEEECCccCCcCC
Confidence            5999999999999999999999999999999762 2111111 12367889999999999888889999999997432  


Q ss_pred             -CCCCcccchhhhhHHHHHHHHHHHhcC------CCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHH
Q 019878           79 -WLPDPSRFFAVNVEGLKNVVQAAKETK------TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADK  151 (334)
Q Consensus        79 -~~~~~~~~~~~n~~~~~~l~~~~~~~~------~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~  151 (334)
                       ..+++...+++|+.++.++++++.+..      +...++..||.....+.               ....|+.||++.+.
T Consensus        95 ~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~~---------------~~~~Y~aSKaal~~  159 (245)
T PRK12367         95 QDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQPA---------------LSPSYEISKRLIGQ  159 (245)
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCCC---------------CCchhHHHHHHHHH
Confidence             223456788999999999999887642      11234444443222110               12569999998754


Q ss_pred             HH---HHH----hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhc
Q 019878          152 IA---LQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEK  224 (334)
Q Consensus       152 ~~---~~~----~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~  224 (334)
                      +.   .++    .+.++.+..+.|+.+..+.                   .+         ...+..+|+|+.+..++.+
T Consensus       160 ~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~-------------------~~---------~~~~~~~~vA~~i~~~~~~  211 (245)
T PRK12367        160 LVSLKKNLLDKNERKKLIIRKLILGPFRSEL-------------------NP---------IGIMSADFVAKQILDQANL  211 (245)
T ss_pred             HHHHHHHHHHhhcccccEEEEecCCCccccc-------------------Cc---------cCCCCHHHHHHHHHHHHhc
Confidence            33   222    2347777777777653220                   00         0146789999999999876


Q ss_pred             C
Q 019878          225 G  225 (334)
Q Consensus       225 ~  225 (334)
                      .
T Consensus       212 ~  212 (245)
T PRK12367        212 G  212 (245)
T ss_pred             C
Confidence            4

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.72  E-value=8.1e-17  Score=139.01  Aligned_cols=212  Identities=18%  Similarity=0.212  Sum_probs=143.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      +++||||+|+||.++++.|+++|++|++++|+.+..+.+..  ..++.++.+|+.|.+++.++++       ++|++||+
T Consensus         7 ~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~   86 (262)
T TIGR03325         7 VVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCLIPN   86 (262)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            59999999999999999999999999999998754332221  1257889999999887766654       47999999


Q ss_pred             ccccC---CC-C-------CCcccchhhhhHHHHHHHHHHHhcC--CCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           73 AALVE---PW-L-------PDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        73 a~~~~---~~-~-------~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      ||...   +. .       ++++..+++|+.++..+++++.+..  .-.++|++||...+.+...              .
T Consensus        87 Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--------------~  152 (262)
T TIGR03325        87 AGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGG--------------G  152 (262)
T ss_pred             CCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCCC--------------C
Confidence            98632   11 0       1245688999999999999997642  1247888888655432211              2


Q ss_pred             ChHHHHHHHHHHHHHHHhhc---CCCEEEEecCceecCCCCCc-h---h-HHHH-HHHHHHcCCCCccccCCCCceeeee
Q 019878          140 TQYERSKAVADKIALQAASE---GLPIVPVYPGVIYGPGKLTT-G---N-LVAK-LMIERFNGRLPGYIGYGNDRFSFCH  210 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~~~---g~~~~ilR~~~v~G~~~~~~-~---~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~  210 (334)
                      ..|+.+|.+.+.+.+.+...   .+++..+.||.+..+..... .   . .... ..........+        ...+..
T Consensus       153 ~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--------~~r~~~  224 (262)
T TIGR03325       153 PLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLP--------IGRMPD  224 (262)
T ss_pred             chhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCC--------CCCCCC
Confidence            56999999999988876532   38899999999976532110 0   0 0000 00111111111        123566


Q ss_pred             HHHHHHHHHHHhhcC----CCCCeEEecC
Q 019878          211 VDDVVDGHIAAMEKG----RSGERYLLTG  235 (334)
Q Consensus       211 v~D~a~a~~~~~~~~----~~g~~~~i~g  235 (334)
                      .+|+++++..++...    -.|.++.+.|
T Consensus       225 p~eva~~~~~l~s~~~~~~~tG~~i~vdg  253 (262)
T TIGR03325       225 AEEYTGAYVFFATRGDTVPATGAVLNYDG  253 (262)
T ss_pred             hHHhhhheeeeecCCCcccccceEEEecC
Confidence            899999998887642    2577777743

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.72  E-value=4.2e-16  Score=134.47  Aligned_cols=209  Identities=18%  Similarity=0.154  Sum_probs=137.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC-C----CCCC-CCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-S----GLPS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~----~~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+|.||.++++.|+++|++|+++.|+..+. .    .+.. ..++.++.+|++|.+++.++++       ++|+
T Consensus         9 ~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   88 (261)
T PRK08936          9 VVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGTLDV   88 (261)
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            599999999999999999999999999888854321 1    1110 1257789999999988777654       4899


Q ss_pred             EEEeccccCCC------CCCcccchhhhhHHHHHHHHHH----HhcCCCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           69 IFHTAALVEPW------LPDPSRFFAVNVEGLKNVVQAA----KETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        69 vih~a~~~~~~------~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      +||+||.....      ..+++..+++|+.++..+++.+    .+.+.-.++|++||...+.+.+              +
T Consensus        89 lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~--------------~  154 (261)
T PRK08936         89 MINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWP--------------L  154 (261)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCC--------------C
Confidence            99999974321      1223456889988876655544    4432235899999964432211              1


Q ss_pred             cChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          139 CTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      ...|+.+|.+.+.+.+.+    ..+|++++.++|+.+..+........ .... .......+        ...+...+|+
T Consensus       155 ~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~-~~~~~~~~--------~~~~~~~~~v  224 (261)
T PRK08936        155 FVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFAD-PKQR-ADVESMIP--------MGYIGKPEEI  224 (261)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCC-HHHH-HHHHhcCC--------CCCCcCHHHH
Confidence            366999998777666654    34589999999999988743211000 1111 11111111        1236678999


Q ss_pred             HHHHHHHhhcCC---CCCeEEec
Q 019878          215 VDGHIAAMEKGR---SGERYLLT  234 (334)
Q Consensus       215 a~a~~~~~~~~~---~g~~~~i~  234 (334)
                      ++++..++....   .|..+.+.
T Consensus       225 a~~~~~l~s~~~~~~~G~~i~~d  247 (261)
T PRK08936        225 AAVAAWLASSEASYVTGITLFAD  247 (261)
T ss_pred             HHHHHHHcCcccCCccCcEEEEC
Confidence            999999887532   46666664

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.72  E-value=2.1e-16  Score=139.31  Aligned_cols=206  Identities=19%  Similarity=0.187  Sum_probs=139.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC-CCC----CCC-CCCeEEEEcCCCChhhHHHHhc------CCCE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISG----LPS-EGALELVYGDVTDYRSLVDACF------GCHV   68 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~----~~~-~~~v~~~~~Dl~d~~~~~~~~~------~~d~   68 (334)
                      +++|||||+|+||.++++.|+++|++|++.+++... ...    +.. ..++.++.+|+.|.+.+.++++      .+|+
T Consensus        13 k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~iD~   92 (306)
T PRK07792         13 KVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGLDI   92 (306)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCCE
Confidence            369999999999999999999999999999875431 111    111 1257889999999988877664      4899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC----------CCcEEEEecccceeccCCCccCCCCCc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----------TVEKIIYTSSFFALGSTDGYIADENQV  132 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----------~~~~~v~~Ss~~v~~~~~~~~~~e~~~  132 (334)
                      |||+||....      ..+++...+++|+.++.++++++..+.          .-.++|++||...+.....        
T Consensus        93 li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------  164 (306)
T PRK07792         93 VVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVG--------  164 (306)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCC--------
Confidence            9999997432      123455678999999999999875321          0148999998765533221        


Q ss_pred             cccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceee
Q 019878          133 HEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSF  208 (334)
Q Consensus       133 ~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (334)
                            ...|+.+|.+.+.+.+.+.    ++|+++..+.|+. -.+       +....+     ...+...   ....++
T Consensus       165 ------~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~-------~~~~~~-----~~~~~~~---~~~~~~  222 (306)
T PRK07792        165 ------QANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTA-------MTADVF-----GDAPDVE---AGGIDP  222 (306)
T ss_pred             ------CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCc-------hhhhhc-----cccchhh---hhccCC
Confidence                  2569999999998877654    4689999999872 111       000100     0000000   011234


Q ss_pred             eeHHHHHHHHHHHhhcC---CCCCeEEecCC
Q 019878          209 CHVDDVVDGHIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       209 i~v~D~a~a~~~~~~~~---~~g~~~~i~g~  236 (334)
                      +.++|++.++..++...   ..|++|.+.|.
T Consensus       223 ~~pe~va~~v~~L~s~~~~~~tG~~~~v~gg  253 (306)
T PRK07792        223 LSPEHVVPLVQFLASPAAAEVNGQVFIVYGP  253 (306)
T ss_pred             CCHHHHHHHHHHHcCccccCCCCCEEEEcCC
Confidence            67999999998887642   36888888643

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.71  E-value=2.7e-16  Score=133.89  Aligned_cols=189  Identities=17%  Similarity=0.154  Sum_probs=130.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC------CCCCeEEEEcCCCCh--hhHHHH-------h-cC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP------SEGALELVYGDVTDY--RSLVDA-------C-FG   65 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~~v~~~~~Dl~d~--~~~~~~-------~-~~   65 (334)
                      +++||||+|+||.++++.|+++|++|++++|+++....+.      ....+.++.+|+.+.  +.+.++       + ..
T Consensus         8 ~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~~~   87 (239)
T PRK08703          8 TILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEATQGK   87 (239)
T ss_pred             EEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHhCCC
Confidence            5999999999999999999999999999999875432110      012466788998753  333332       2 35


Q ss_pred             CCEEEEeccccCC---CC----CCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccc
Q 019878           66 CHVIFHTAALVEP---WL----PDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEE  135 (334)
Q Consensus        66 ~d~vih~a~~~~~---~~----~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~  135 (334)
                      +|+|||+||....   ..    +++...+++|+.++.++++++.+.   .+..++|++||.....+.             
T Consensus        88 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~-------------  154 (239)
T PRK08703         88 LDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPK-------------  154 (239)
T ss_pred             CCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCC-------------
Confidence            8999999996321   11    123446899999998888888553   134689999985432111             


Q ss_pred             ccccChHHHHHHHHHHHHHHHhh----c-CCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeee
Q 019878          136 KYFCTQYERSKAVADKIALQAAS----E-GLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCH  210 (334)
Q Consensus       136 ~~~~~~Y~~sK~~~E~~~~~~~~----~-g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  210 (334)
                       .+...|+.+|++.+.+++.+..    . ++++..++||.++++.....           ..+         .....+..
T Consensus       155 -~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~-----------~~~---------~~~~~~~~  213 (239)
T PRK08703        155 -AYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKS-----------HPG---------EAKSERKS  213 (239)
T ss_pred             -CCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcccccc-----------CCC---------CCccccCC
Confidence             1135699999999998877652    2 59999999999998742110           001         11123567


Q ss_pred             HHHHHHHHHHHhhc
Q 019878          211 VDDVVDGHIAAMEK  224 (334)
Q Consensus       211 v~D~a~a~~~~~~~  224 (334)
                      .+|++.++..++..
T Consensus       214 ~~~~~~~~~~~~~~  227 (239)
T PRK08703        214 YGDVLPAFVWWASA  227 (239)
T ss_pred             HHHHHHHHHHHhCc
Confidence            99999999998874

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.71  E-value=1.5e-16  Score=137.57  Aligned_cols=213  Identities=14%  Similarity=0.058  Sum_probs=141.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CC---CCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS---EGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~---~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      ++|||||+|+||.++++.|+++|++|++++|++++....    ..   ..++.++.+|++|.+++.++++       .+|
T Consensus        10 ~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   89 (265)
T PRK07062         10 VAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFGGVD   89 (265)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence            499999999999999999999999999999987543211    11   1257789999999988876653       479


Q ss_pred             EEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        68 ~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      ++||+||....      ..+++...+++|+.+...+.+.+...   .+..++|++||...+.+.+.              
T Consensus        90 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------  155 (265)
T PRK07062         90 MLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPH--------------  155 (265)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCC--------------
Confidence            99999997321      11234556788888877777666542   13469999999766543221              


Q ss_pred             cChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCchh-------HHHHHHHHHHcCCCCccccCCCCcee
Q 019878          139 CTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGN-------LVAKLMIERFNGRLPGYIGYGNDRFS  207 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (334)
                      ...|+.+|.+.+.+.+.+    .++|+++..++||.+..+.......       ....+.........       -....
T Consensus       156 ~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~p~~r  228 (265)
T PRK07062        156 MVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKG-------IPLGR  228 (265)
T ss_pred             chHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCC-------CCcCC
Confidence            256999999877666654    3468999999999987653110000       00011111000000       01123


Q ss_pred             eeeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          208 FCHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       208 ~i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +...+|+++++..++...   -.|+++.+.|
T Consensus       229 ~~~p~~va~~~~~L~s~~~~~~tG~~i~vdg  259 (265)
T PRK07062        229 LGRPDEAARALFFLASPLSSYTTGSHIDVSG  259 (265)
T ss_pred             CCCHHHHHHHHHHHhCchhcccccceEEEcC
Confidence            567899999999988642   3688887754

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.71  E-value=9.1e-16  Score=130.24  Aligned_cols=202  Identities=16%  Similarity=0.106  Sum_probs=137.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHh---cCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC---FGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~---~~~d~vih~a~~   75 (334)
                      |+++||||+|+||++++++|+++|  +.|....|+....  .. ..++.++++|++|.+++.++.   .++|+|||+||.
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--~~-~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG~   77 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--FQ-HDNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVGM   77 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--cc-cCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCcc
Confidence            899999999999999999999985  5566656654332  11 236889999999998876654   468999999997


Q ss_pred             cCCC---------C---CCcccchhhhhHHHHHHHHHHHhcC---CCcEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           76 VEPW---------L---PDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        76 ~~~~---------~---~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      ....         .   +.....+.+|+.++..+++.+.+..   +..+++++||..  +.....     . .   .+..
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~--~~~~~~-----~-~---~~~~  146 (235)
T PRK09009         78 LHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKV--GSISDN-----R-L---GGWY  146 (235)
T ss_pred             ccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecc--cccccC-----C-C---CCcc
Confidence            5321         0   1123467899999988888887642   235888888732  211100     0 0   1135


Q ss_pred             hHHHHHHHHHHHHHHHhh------cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          141 QYERSKAVADKIALQAAS------EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~~------~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      .|+.+|++.+.+.+.+..      .++++..+.||.+..+....           .... .        ....+...+|+
T Consensus       147 ~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~-----------~~~~-~--------~~~~~~~~~~~  206 (235)
T PRK09009        147 SYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKP-----------FQQN-V--------PKGKLFTPEYV  206 (235)
T ss_pred             hhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcc-----------hhhc-c--------ccCCCCCHHHH
Confidence            799999999988877552      37889999999987764211           0000 0        11235789999


Q ss_pred             HHHHHHHhhcCC---CCCeEEecCC
Q 019878          215 VDGHIAAMEKGR---SGERYLLTGE  236 (334)
Q Consensus       215 a~a~~~~~~~~~---~g~~~~i~g~  236 (334)
                      ++++..++....   .|..+.+.|+
T Consensus       207 a~~~~~l~~~~~~~~~g~~~~~~g~  231 (235)
T PRK09009        207 AQCLLGIIANATPAQSGSFLAYDGE  231 (235)
T ss_pred             HHHHHHHHHcCChhhCCcEEeeCCc
Confidence            999999998753   5666666544

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.71  E-value=5.8e-16  Score=133.53  Aligned_cols=210  Identities=13%  Similarity=0.097  Sum_probs=137.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCC-CCC----CCCC--CCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DIS----GLPS--EGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~----~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      ++|||||+|+||.++++.|+++|++|+++.|+.. ...    .+..  ...+.++.+|++|++++.++++       ++|
T Consensus        10 ~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   89 (260)
T PRK08416         10 TLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFDRVD   89 (260)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcCCcc
Confidence            5999999999999999999999999988876432 111    1111  1257899999999988877664       479


Q ss_pred             EEEEeccccCC------------CCCCcccchhhhhHHHHHHHHHHHhcC---CCcEEEEecccceeccCCCccCCCCCc
Q 019878           68 VIFHTAALVEP------------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQV  132 (334)
Q Consensus        68 ~vih~a~~~~~------------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~~~~~~e~~~  132 (334)
                      ++||+||....            ...+....+++|+.+...+.+.+.+..   +..++|++||.......+.        
T Consensus        90 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------  161 (260)
T PRK08416         90 FFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIEN--------  161 (260)
T ss_pred             EEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCC--------
Confidence            99999985321            011234467778887776666554431   2458999999654322111        


Q ss_pred             cccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceee
Q 019878          133 HEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSF  208 (334)
Q Consensus       133 ~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (334)
                            ...|+.+|++.+.+.+.+.    ++|+++..+.||.+-.+......+. ........ ...+        ...+
T Consensus       162 ------~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~-~~~~~~~~-~~~~--------~~r~  225 (260)
T PRK08416        162 ------YAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNY-EEVKAKTE-ELSP--------LNRM  225 (260)
T ss_pred             ------cccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCC-HHHHHHHH-hcCC--------CCCC
Confidence                  2569999999998888765    3489999999998855421100000 01111111 1111        1135


Q ss_pred             eeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          209 CHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       209 i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      ..++|+++++..++...   ..|+.+.+.|
T Consensus       226 ~~p~~va~~~~~l~~~~~~~~~G~~i~vdg  255 (260)
T PRK08416        226 GQPEDLAGACLFLCSEKASWLTGQTIVVDG  255 (260)
T ss_pred             CCHHHHHHHHHHHcChhhhcccCcEEEEcC
Confidence            67999999999998654   3577777754

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.71  E-value=1.5e-16  Score=136.12  Aligned_cols=191  Identities=17%  Similarity=0.150  Sum_probs=131.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CCC--CCCeEEEEcCCC--ChhhHHHHh-------cC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPS--EGALELVYGDVT--DYRSLVDAC-------FG   65 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~--~~~v~~~~~Dl~--d~~~~~~~~-------~~   65 (334)
                      ++||||||+|+||.++++.|+++|++|++++|+.++...    +..  ..++.++.+|++  +.+.+.+++       ..
T Consensus        13 k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~   92 (247)
T PRK08945         13 RIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQFGR   92 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHhCC
Confidence            469999999999999999999999999999998643211    111  125677888886  444443332       35


Q ss_pred             CCEEEEeccccCC-------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccc
Q 019878           66 CHVIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEE  135 (334)
Q Consensus        66 ~d~vih~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~  135 (334)
                      +|+|||+|+....       ....++..+++|+.++.++++++.+.   .+.++||++||.........           
T Consensus        93 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~-----------  161 (247)
T PRK08945         93 LDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRAN-----------  161 (247)
T ss_pred             CCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCC-----------
Confidence            8999999986322       11234567889999988888877531   25679999999754432211           


Q ss_pred             ccccChHHHHHHHHHHHHHHHhh----cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeH
Q 019878          136 KYFCTQYERSKAVADKIALQAAS----EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHV  211 (334)
Q Consensus       136 ~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  211 (334)
                         ...|+.+|++.+.+++.+..    .|+++++++|+.+-++....           ......         ...+...
T Consensus       162 ---~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~-----------~~~~~~---------~~~~~~~  218 (247)
T PRK08945        162 ---WGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRAS-----------AFPGED---------PQKLKTP  218 (247)
T ss_pred             ---CcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhh-----------hcCccc---------ccCCCCH
Confidence               25699999999998887642    37889999999886542100           000000         1135678


Q ss_pred             HHHHHHHHHHhhcC
Q 019878          212 DDVVDGHIAAMEKG  225 (334)
Q Consensus       212 ~D~a~a~~~~~~~~  225 (334)
                      +|+++++..++...
T Consensus       219 ~~~~~~~~~~~~~~  232 (247)
T PRK08945        219 EDIMPLYLYLMGDD  232 (247)
T ss_pred             HHHHHHHHHHhCcc
Confidence            99999999987643

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.71  E-value=1.2e-15  Score=131.96  Aligned_cols=207  Identities=18%  Similarity=0.227  Sum_probs=136.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCC-CCCCC----CCC--CCCeEEEEcCCCChhhH----HHHh-------
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISG----LPS--EGALELVYGDVTDYRSL----VDAC-------   63 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~----~~~--~~~v~~~~~Dl~d~~~~----~~~~-------   63 (334)
                      +++||||+|+||.++++.|+++|++|+++.|+. +....    +..  ...+.++.+|++|.+.+    .+++       
T Consensus         3 ~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~   82 (267)
T TIGR02685         3 AAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRAF   82 (267)
T ss_pred             EEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHcc
Confidence            589999999999999999999999999987643 22211    111  12466789999998754    2222       


Q ss_pred             cCCCEEEEeccccCC--C-CC--------------CcccchhhhhHHHHHHHHHHHhcCC---------CcEEEEecccc
Q 019878           64 FGCHVIFHTAALVEP--W-LP--------------DPSRFFAVNVEGLKNVVQAAKETKT---------VEKIIYTSSFF  117 (334)
Q Consensus        64 ~~~d~vih~a~~~~~--~-~~--------------~~~~~~~~n~~~~~~l~~~~~~~~~---------~~~~v~~Ss~~  117 (334)
                      .++|+|||+||....  . ..              +....+++|+.++..+++++.....         ..++|++||..
T Consensus        83 g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~  162 (267)
T TIGR02685        83 GRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAM  162 (267)
T ss_pred             CCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhhh
Confidence            358999999996321  1 01              1235689999999999988765421         13577777654


Q ss_pred             eeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcC
Q 019878          118 ALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNG  193 (334)
Q Consensus       118 v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~  193 (334)
                      ...+.              ++.+.|+.+|++.+.+.+.+.    ++|++++.++|+.+..+....  .   . .......
T Consensus       163 ~~~~~--------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~--~---~-~~~~~~~  222 (267)
T TIGR02685       163 TDQPL--------------LGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP--F---E-VQEDYRR  222 (267)
T ss_pred             ccCCC--------------cccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc--h---h-HHHHHHH
Confidence            32111              113679999999998888754    358999999999987663321  1   1 1111111


Q ss_pred             CCCccccCCCCceeeeeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          194 RLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       194 ~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      ..+  .+     ..+...+|+++++..++...   ..|..+.+.|
T Consensus       223 ~~~--~~-----~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~g  260 (267)
T TIGR02685       223 KVP--LG-----QREASAEQIADVVIFLVSPKAKYITGTCIKVDG  260 (267)
T ss_pred             hCC--CC-----cCCCCHHHHHHHHHHHhCcccCCcccceEEECC
Confidence            111  00     12457899999999998754   2577777753

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.70  E-value=1.2e-16  Score=141.19  Aligned_cols=170  Identities=20%  Similarity=0.140  Sum_probs=122.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CC---CCCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LP---SEGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~---~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      +++||||+|+||.++++.|+++|++|++++|+.++...    +.   ...++.++.+|+.|.+++.++++       .+|
T Consensus        16 ~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~iD   95 (313)
T PRK05854         16 RAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGRPIH   95 (313)
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCCCcc
Confidence            69999999999999999999999999999998653221    10   01258899999999998877654       389


Q ss_pred             EEEEeccccCC-----CCCCcccchhhhhHHHHHHHHHHHhcC--CCcEEEEecccceeccC-CCccCCCCCcccccccc
Q 019878           68 VIFHTAALVEP-----WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGST-DGYIADENQVHEEKYFC  139 (334)
Q Consensus        68 ~vih~a~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~-~~~~~~e~~~~~~~~~~  139 (334)
                      ++||+||....     .....+..+.+|+.+...+.+.+....  +..++|++||...+... ......++.   +..+.
T Consensus        96 ~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~---~~~~~  172 (313)
T PRK05854         96 LLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWER---SYAGM  172 (313)
T ss_pred             EEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccccc---cCcch
Confidence            99999997532     223456678999999888877776421  23589999987654321 111111111   11234


Q ss_pred             ChHHHHHHHHHHHHHHHhh------cCCCEEEEecCceecC
Q 019878          140 TQYERSKAVADKIALQAAS------EGLPIVPVYPGVIYGP  174 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~~------~g~~~~ilR~~~v~G~  174 (334)
                      ..|+.||.+.+.+.+++.+      .|+.+..+.||.+..+
T Consensus       173 ~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~  213 (313)
T PRK05854        173 RAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTN  213 (313)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccC
Confidence            7899999999998887652      3799999999998765

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.70  E-value=8.3e-16  Score=131.87  Aligned_cols=209  Identities=16%  Similarity=0.065  Sum_probs=142.9

Q ss_pred             cEEEEcCC--ChhhHHHHHHHHhCCCeEEEEEcCCCCC---CCCCCCCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTSDI---SGLPSEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~t--G~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      +++||||+  +.||.++++.|+++|++|++.+|+....   ..+.. ..+.++.+|++|.+++.++++       ++|++
T Consensus         9 ~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~l   87 (252)
T PRK06079          9 KIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVD-EEDLLVECDVASDESIERAFATIKERVGKIDGI   87 (252)
T ss_pred             EEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhcc-CceeEEeCCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            49999999  7999999999999999999998873211   11111 257889999999988776653       48999


Q ss_pred             EEeccccCC----------CCCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           70 FHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        70 ih~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      ||+||....          ..++++..+++|+.++..+++++.+.. .-.++|++||.......+              .
T Consensus        88 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~~--------------~  153 (252)
T PRK06079         88 VHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIP--------------N  153 (252)
T ss_pred             EEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccCC--------------c
Confidence            999997421          112345678999999999998887652 124899999865432211              1


Q ss_pred             cChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      ...|+.+|.+.+.+.+.+.    ++|+++..+.||.|-.+....... -...... .....+        ...+...+|+
T Consensus       154 ~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~-~~~~~~~-~~~~~p--------~~r~~~pedv  223 (252)
T PRK06079        154 YNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKG-HKDLLKE-SDSRTV--------DGVGVTIEEV  223 (252)
T ss_pred             chhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCC-hHHHHHH-HHhcCc--------ccCCCCHHHH
Confidence            3679999999888887654    458999999999997653211100 0111111 111111        1136678999


Q ss_pred             HHHHHHHhhcC---CCCCeEEecC
Q 019878          215 VDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       215 a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      ++++..++...   -.|.+..+.|
T Consensus       224 a~~~~~l~s~~~~~itG~~i~vdg  247 (252)
T PRK06079        224 GNTAAFLLSDLSTGVTGDIIYVDK  247 (252)
T ss_pred             HHHHHHHhCcccccccccEEEeCC
Confidence            99999998753   2577777653

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.70  E-value=1.9e-16  Score=154.22  Aligned_cols=190  Identities=19%  Similarity=0.194  Sum_probs=141.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      +++|||||+|+||.++++.|+++|++|++++|+++....+.     ...++.++.+|+.|.+++.++++       ++|+
T Consensus       372 k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  451 (657)
T PRK07201        372 KVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVDY  451 (657)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            36999999999999999999999999999999875432211     11258899999999998887765       5899


Q ss_pred             EEEeccccCC-----C---CCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccc
Q 019878           69 IFHTAALVEP-----W---LPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        69 vih~a~~~~~-----~---~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~  137 (334)
                      +||+||....     .   .++....+++|+.++.++.+++.+.   .+..++|++||.+.+...+.             
T Consensus       452 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------  518 (657)
T PRK07201        452 LVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPR-------------  518 (657)
T ss_pred             EEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCC-------------
Confidence            9999996321     1   1234567899999998887776442   14569999999988764332             


Q ss_pred             ccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHH
Q 019878          138 FCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                       .+.|+.+|.+.+.+.+.+.    ++|+++++++||.+..+...+..             .    +    .....+..++
T Consensus       519 -~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~-------------~----~----~~~~~~~~~~  576 (657)
T PRK07201        519 -FSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTK-------------R----Y----NNVPTISPEE  576 (657)
T ss_pred             -cchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCccc-------------c----c----cCCCCCCHHH
Confidence             2669999999998887654    45899999999999876422100             0    0    0112467999


Q ss_pred             HHHHHHHHhhcC
Q 019878          214 VVDGHIAAMEKG  225 (334)
Q Consensus       214 ~a~a~~~~~~~~  225 (334)
                      +|+.++.++.+.
T Consensus       577 ~a~~i~~~~~~~  588 (657)
T PRK07201        577 AADMVVRAIVEK  588 (657)
T ss_pred             HHHHHHHHHHhC
Confidence            999999987653

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.70  E-value=5.4e-16  Score=134.70  Aligned_cols=222  Identities=15%  Similarity=0.120  Sum_probs=142.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CC-CCCeEEEEcCCCChhhHHHHhc------CCCEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS-EGALELVYGDVTDYRSLVDACF------GCHVIF   70 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~-~~~v~~~~~Dl~d~~~~~~~~~------~~d~vi   70 (334)
                      +++|||+ |+||.++++.|. +|++|++++|+.++...+    .. ..++.++.+|++|.+++.++++      .+|+||
T Consensus         4 ~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~li   81 (275)
T PRK06940          4 VVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGLV   81 (275)
T ss_pred             EEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEEE
Confidence            3899997 799999999996 799999999976533211    11 1257889999999988877764      489999


Q ss_pred             EeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEecccceeccCC-----Cc---cCCCCCc--cc---cc
Q 019878           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTD-----GY---IADENQV--HE---EK  136 (334)
Q Consensus        71 h~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~Ss~~v~~~~~-----~~---~~~e~~~--~~---~~  136 (334)
                      |+||... ...++...+++|+.++.++++++.+... -.+.|++||........     ..   ..+....  .+   +.
T Consensus        82 ~nAG~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (275)
T PRK06940         82 HTAGVSP-SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPD  160 (275)
T ss_pred             ECCCcCC-chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccccccccccccc
Confidence            9999743 2356778999999999999999876521 13567777765432210     00   0000000  00   00


Q ss_pred             ---cccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCC-chhHHHHHHHHHHcCCCCccccCCCCceee
Q 019878          137 ---YFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLT-TGNLVAKLMIERFNGRLPGYIGYGNDRFSF  208 (334)
Q Consensus       137 ---~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (334)
                         .+...|+.||++.+.+.+.+.    ++|+++..+.||.+..+.... ....-......... ..+        ...+
T Consensus       161 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~p--------~~r~  231 (275)
T PRK06940        161 AIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFA-KSP--------AGRP  231 (275)
T ss_pred             ccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhh-hCC--------cccC
Confidence               124679999999888777543    468999999999997763210 00000011111111 111        1236


Q ss_pred             eeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          209 CHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       209 i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      ...+|+|+++..++...   -.|..+.+.|
T Consensus       232 ~~peeia~~~~fL~s~~~~~itG~~i~vdg  261 (275)
T PRK06940        232 GTPDEIAALAEFLMGPRGSFITGSDFLVDG  261 (275)
T ss_pred             CCHHHHHHHHHHHcCcccCcccCceEEEcC
Confidence            67999999999988643   2577777754

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.69  E-value=3.7e-16  Score=145.30  Aligned_cols=210  Identities=19%  Similarity=0.144  Sum_probs=142.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC--CCCCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI--SGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      ++|||||+|.||.++++.|.++|++|++++|+....  ..+...-+..++.+|++|.+++.++++       .+|+|||+
T Consensus       212 ~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~vi~~  291 (450)
T PRK08261        212 VALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIVVHN  291 (450)
T ss_pred             EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence            699999999999999999999999999998854221  111111134678899999988777664       48999999


Q ss_pred             ccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC---CCcEEEEecccceeccCCCccCCCCCccccccccChHH
Q 019878           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (334)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (334)
                      ||....      ..+++...+++|+.++.++.+++....   ...+||++||...+.....              ...|+
T Consensus       292 AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~--------------~~~Y~  357 (450)
T PRK08261        292 AGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRG--------------QTNYA  357 (450)
T ss_pred             CCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCC--------------ChHHH
Confidence            997432      123345678899999999999998741   1258999999765432221              26699


Q ss_pred             HHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHH
Q 019878          144 RSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHI  219 (334)
Q Consensus       144 ~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  219 (334)
                      .+|...+.+.+.+.    ++|+++..+.|+.+-.+....    ++......... ..       ......-.+|+++++.
T Consensus       358 asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~----~~~~~~~~~~~-~~-------~l~~~~~p~dva~~~~  425 (450)
T PRK08261        358 ASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAA----IPFATREAGRR-MN-------SLQQGGLPVDVAETIA  425 (450)
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhc----cchhHHHHHhh-cC-------CcCCCCCHHHHHHHHH
Confidence            99997776666543    458999999999875432110    11111111111 00       0111234679999999


Q ss_pred             HHhhcC---CCCCeEEecCCC
Q 019878          220 AAMEKG---RSGERYLLTGEN  237 (334)
Q Consensus       220 ~~~~~~---~~g~~~~i~g~~  237 (334)
                      .++...   ..|+++.++|+.
T Consensus       426 ~l~s~~~~~itG~~i~v~g~~  446 (450)
T PRK08261        426 WLASPASGGVTGNVVRVCGQS  446 (450)
T ss_pred             HHhChhhcCCCCCEEEECCCc
Confidence            988643   258888887654

>PRK05855 short chain dehydrogenase; Validated

Probab=99.69  E-value=8.7e-17  Score=154.45  Aligned_cols=160  Identities=18%  Similarity=0.161  Sum_probs=123.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CC-CCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      |++|||||+|+||+++++.|+++|++|++++|+.++...+    .. ..++.++.+|++|.+++.++++       .+|+
T Consensus       316 ~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  395 (582)
T PRK05855        316 KLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVPDI  395 (582)
T ss_pred             CEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCCcE
Confidence            4699999999999999999999999999999986543221    11 1257899999999998877764       3899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc----CCCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      |||+||....      ..++....+++|+.++.++++++...    +...++|++||...|.....              
T Consensus       396 lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--------------  461 (582)
T PRK05855        396 VVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRS--------------  461 (582)
T ss_pred             EEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCC--------------
Confidence            9999998432      12244567889999999988886543    11258999999988764432              


Q ss_pred             cChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecC
Q 019878          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGP  174 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~  174 (334)
                      .+.|+.+|++.+.+.+.+.    ++|++++.++||.+-.+
T Consensus       462 ~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~  501 (582)
T PRK05855        462 LPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTN  501 (582)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCccc
Confidence            3679999998887776643    45999999999988654

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.69  E-value=2.2e-16  Score=135.82  Aligned_cols=198  Identities=16%  Similarity=0.141  Sum_probs=134.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHh----CCCeEEEEEcCCCCCCCC----CC---CCCeEEEEcCCCChhhHHHHhcC-----
Q 019878            2 KILVSGASGYLGGRLCHALLK----QGHSVRALVRRTSDISGL----PS---EGALELVYGDVTDYRSLVDACFG-----   65 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~----~~---~~~v~~~~~Dl~d~~~~~~~~~~-----   65 (334)
                      .+|||||+|.||.+++++|++    .|++|++++|+.+..+.+    ..   ...+.++.+|++|.+++.++++.     
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            589999999999999999997    799999999986543221    11   12578899999999988776532     


Q ss_pred             ------CCEEEEeccccCC---CC------CCcccchhhhhHHHHHHHHHHHhcC----C-CcEEEEecccceeccCCCc
Q 019878           66 ------CHVIFHTAALVEP---WL------PDPSRFFAVNVEGLKNVVQAAKETK----T-VEKIIYTSSFFALGSTDGY  125 (334)
Q Consensus        66 ------~d~vih~a~~~~~---~~------~~~~~~~~~n~~~~~~l~~~~~~~~----~-~~~~v~~Ss~~v~~~~~~~  125 (334)
                            .|+|||+||....   ..      ++....+++|+.++..+.+.+.+..    + ..++|++||...+.+.+  
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~--  159 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFK--  159 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCC--
Confidence                  2599999996321   11      1234688999999988887776541    1 24899999976543221  


Q ss_pred             cCCCCCccccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHH----HHHHHHcCCCCc
Q 019878          126 IADENQVHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAK----LMIERFNGRLPG  197 (334)
Q Consensus       126 ~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~----~~~~~~~~~~~~  197 (334)
                                  ....|+.+|.+.+.+.+.+.    .+|+++..+.||.+-.+..   ......    ..........  
T Consensus       160 ------------~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~---~~~~~~~~~~~~~~~~~~~~--  222 (256)
T TIGR01500       160 ------------GWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQ---QQVREESVDPDMRKGLQELK--  222 (256)
T ss_pred             ------------CchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHH---HHHHHhcCChhHHHHHHHHH--
Confidence                        13669999999998888754    3589999999999865421   000000    0000000000  


Q ss_pred             cccCCCCceeeeeHHHHHHHHHHHhhc
Q 019878          198 YIGYGNDRFSFCHVDDVVDGHIAAMEK  224 (334)
Q Consensus       198 ~~~~~~~~~~~i~v~D~a~a~~~~~~~  224 (334)
                            ....+..++|+|+++..++.+
T Consensus       223 ------~~~~~~~p~eva~~~~~l~~~  243 (256)
T TIGR01500       223 ------AKGKLVDPKVSAQKLLSLLEK  243 (256)
T ss_pred             ------hcCCCCCHHHHHHHHHHHHhc
Confidence                  111256799999999999863

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.69  E-value=5.5e-16  Score=125.39  Aligned_cols=156  Identities=22%  Similarity=0.295  Sum_probs=119.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCC--------CCCCeEEEEcCCCChhhHHHHhcC-------
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLP--------SEGALELVYGDVTDYRSLVDACFG-------   65 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~--------~~~~v~~~~~Dl~d~~~~~~~~~~-------   65 (334)
                      +++||||+|+||.++++.|.++|. .|++++|+..+.....        ...++.++.+|+.+.+.+.+++..       
T Consensus         2 ~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (180)
T smart00822        2 TYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLGP   81 (180)
T ss_pred             EEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999985 6888888765432210        112577899999998887776543       


Q ss_pred             CCEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           66 CHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        66 ~d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      +|.|||+|+....      ..+++...++.|+.++.++++++++. +.+++|++||....-+...              .
T Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~ii~~ss~~~~~~~~~--------------~  146 (180)
T smart00822       82 LRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL-PLDFFVLFSSVAGVLGNPG--------------Q  146 (180)
T ss_pred             eeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC-CcceEEEEccHHHhcCCCC--------------c
Confidence            6999999996432      12334567899999999999999876 5679999998654322211              2


Q ss_pred             ChHHHHHHHHHHHHHHHhhcCCCEEEEecCcee
Q 019878          140 TQYERSKAVADKIALQAASEGLPIVPVYPGVIY  172 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~~~g~~~~ilR~~~v~  172 (334)
                      ..|+.+|...+.+.+.....|++++.+.|+.+-
T Consensus       147 ~~y~~sk~~~~~~~~~~~~~~~~~~~~~~g~~~  179 (180)
T smart00822      147 ANYAAANAFLDALAAHRRARGLPATSINWGAWA  179 (180)
T ss_pred             hhhHHHHHHHHHHHHHHHhcCCceEEEeecccc
Confidence            569999999999998777789999999888663

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.68  E-value=5.3e-16  Score=135.53  Aligned_cols=206  Identities=19%  Similarity=0.189  Sum_probs=139.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCC---------CCCCC----CCC-CCCeEEEEcCCCChhhHHHHhc---
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT---------SDISG----LPS-EGALELVYGDVTDYRSLVDACF---   64 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~----~~~-~~~v~~~~~Dl~d~~~~~~~~~---   64 (334)
                      ++|||||++.||.++++.|++.|++|++++|+.         +....    +.. ..++.++.+|++|.+++.++++   
T Consensus         8 ~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   87 (286)
T PRK07791          8 VVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVDAAV   87 (286)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHH
Confidence            599999999999999999999999999998765         11111    111 1257789999999988776653   


Q ss_pred             ----CCCEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC---------CCcEEEEecccceeccCCCc
Q 019878           65 ----GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---------TVEKIIYTSSFFALGSTDGY  125 (334)
Q Consensus        65 ----~~d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~~v~~Ss~~v~~~~~~~  125 (334)
                          .+|++||+||....      ..+++...+++|+.++..+++++....         ...++|++||........+ 
T Consensus        88 ~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~-  166 (286)
T PRK07791         88 ETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVG-  166 (286)
T ss_pred             HhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCCCC-
Confidence                47999999997432      123456688999999999988875321         0248999999765432221 


Q ss_pred             cCCCCCccccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccC
Q 019878          126 IADENQVHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGY  201 (334)
Q Consensus       126 ~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (334)
                                   ...|+.+|.+.+.+.+.+.    ++|+++..+.|+ +..+.    .   ...+...... .+     
T Consensus       167 -------------~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~----~---~~~~~~~~~~-~~-----  219 (286)
T PRK07791        167 -------------QGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRM----T---ETVFAEMMAK-PE-----  219 (286)
T ss_pred             -------------chhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCc----c---hhhHHHHHhc-Cc-----
Confidence                         2569999998888777643    468999999998 42221    1   1111111111 11     


Q ss_pred             CCCceeeeeHHHHHHHHHHHhhcC---CCCCeEEecCC
Q 019878          202 GNDRFSFCHVDDVVDGHIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       202 ~~~~~~~i~v~D~a~a~~~~~~~~---~~g~~~~i~g~  236 (334)
                       .....+...+|+++++..++...   ..|+++.+.|.
T Consensus       220 -~~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG  256 (286)
T PRK07791        220 -EGEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGG  256 (286)
T ss_pred             -ccccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCC
Confidence             11113457999999999988643   36888888643

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.68  E-value=9e-16  Score=132.25  Aligned_cols=213  Identities=14%  Similarity=0.086  Sum_probs=142.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CCC--CCCeEEEEcCCCChhhHHHHhc---CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPS--EGALELVYGDVTDYRSLVDACF---GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~--~~~v~~~~~Dl~d~~~~~~~~~---~~d~vih~   72 (334)
                      ++|||||+|.||.++++.|+++|++|++++|++++...    +..  ..++.++.+|++|.+++.++++   ++|++||+
T Consensus         9 ~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~lv~~   88 (259)
T PRK06125          9 RVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDILVNN   88 (259)
T ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEEEEC
Confidence            59999999999999999999999999999998654322    111  1257889999999998877765   48999999


Q ss_pred             ccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC---CCcEEEEecccceeccCCCccCCCCCccccccccChHH
Q 019878           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (334)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (334)
                      ||....      ..+++...+++|+.+...+++++.+..   ...++|++||.....+..              ....|+
T Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~--------------~~~~y~  154 (259)
T PRK06125         89 AGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDA--------------DYICGS  154 (259)
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCC--------------CchHhH
Confidence            996421      112345578899999998888874331   235899998864321111              125689


Q ss_pred             HHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCC--CCcc---ccCCCCceeeeeHHHH
Q 019878          144 RSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGR--LPGY---IGYGNDRFSFCHVDDV  214 (334)
Q Consensus       144 ~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~i~v~D~  214 (334)
                      .+|.+.+.+.+.+.    ++|+++..+.||.+..+..       ..++.......  .+..   +-..-....+..++|+
T Consensus       155 ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  227 (259)
T PRK06125        155 AGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRM-------LTLLKGRARAELGDESRWQELLAGLPLGRPATPEEV  227 (259)
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHH-------HHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHH
Confidence            99999888877654    3589999999998876521       11110000000  0000   0000011235689999


Q ss_pred             HHHHHHHhhcC---CCCCeEEecC
Q 019878          215 VDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       215 a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      ++++..++...   ..|.++.+.|
T Consensus       228 a~~~~~l~~~~~~~~~G~~i~vdg  251 (259)
T PRK06125        228 ADLVAFLASPRSGYTSGTVVTVDG  251 (259)
T ss_pred             HHHHHHHcCchhccccCceEEecC
Confidence            99999988643   3577877754

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.68  E-value=1.1e-15  Score=132.44  Aligned_cols=210  Identities=13%  Similarity=0.088  Sum_probs=140.6

Q ss_pred             cEEEEcCCC--hhhHHHHHHHHhCCCeEEEEEcCCCCC---CCCC-CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASG--YLGGRLCHALLKQGHSVRALVRRTSDI---SGLP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG--~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||++  .||.++++.|+++|++|++.+|+....   ..+. ..+...++.+|++|.+++.++++       .+|+
T Consensus         9 ~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   88 (271)
T PRK06505          9 RGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGKLDF   88 (271)
T ss_pred             EEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            499999997  999999999999999999998864211   1111 11123578999999988876653       4899


Q ss_pred             EEEeccccCC----------CCCCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEecccceeccCCCccCCCCCcccccc
Q 019878           69 IFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        69 vih~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~  137 (334)
                      +||+||....          ..+++...+++|+.++.++++++..... -.++|++||.......+              
T Consensus        89 lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~~--------------  154 (271)
T PRK06505         89 VVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMP--------------  154 (271)
T ss_pred             EEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccCC--------------
Confidence            9999997421          1123456788999999999888876421 14899999865432111              


Q ss_pred             ccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHH
Q 019878          138 FCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                      ....|+.+|++.+.+.+.+.    ++|+++..+.||.+-.+....... -.... .......+        ...+...+|
T Consensus       155 ~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~-~~~~~-~~~~~~~p--------~~r~~~pee  224 (271)
T PRK06505        155 NYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGD-ARAIF-SYQQRNSP--------LRRTVTIDE  224 (271)
T ss_pred             ccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcc-hHHHH-HHHhhcCC--------ccccCCHHH
Confidence            12569999998877776644    468999999999997653211100 00111 11111111        112456899


Q ss_pred             HHHHHHHHhhcC---CCCCeEEecC
Q 019878          214 VVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       214 ~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      ++++++.++...   -.|.+..+.|
T Consensus       225 va~~~~fL~s~~~~~itG~~i~vdg  249 (271)
T PRK06505        225 VGGSALYLLSDLSSGVTGEIHFVDS  249 (271)
T ss_pred             HHHHHHHHhCccccccCceEEeecC
Confidence            999999998743   2577777754

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.68  E-value=7.1e-16  Score=136.48  Aligned_cols=188  Identities=18%  Similarity=0.170  Sum_probs=130.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC----C---CCCeEEEEcCCCC--hhhH---HHHhcC--CC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S---EGALELVYGDVTD--YRSL---VDACFG--CH   67 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~---~~~v~~~~~Dl~d--~~~~---~~~~~~--~d   67 (334)
                      +++||||||.||.+++++|+++|++|++++|++++.+.+.    .   ...+..+.+|+.+  .+.+   .+.+.+  +|
T Consensus        55 ~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~did  134 (320)
T PLN02780         55 WALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLDVG  134 (320)
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCCCcc
Confidence            5899999999999999999999999999999876533211    1   1256778899985  2323   333343  56


Q ss_pred             EEEEeccccCC--------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccc
Q 019878           68 VIFHTAALVEP--------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (334)
Q Consensus        68 ~vih~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~  136 (334)
                      ++||+||....        ..++....+++|+.++..+.+++...   .+..++|++||...+.....            
T Consensus       135 ilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~------------  202 (320)
T PLN02780        135 VLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSD------------  202 (320)
T ss_pred             EEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCC------------
Confidence            99999997421        11123457899999999999987643   24568999999766531110            


Q ss_pred             cccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHH
Q 019878          137 YFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVD  212 (334)
Q Consensus       137 ~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  212 (334)
                      +..+.|+.||++.+.+.+.+.    ++|++++.+.||.+-.+...             ..+..          .-....+
T Consensus       203 p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~-------------~~~~~----------~~~~~p~  259 (320)
T PLN02780        203 PLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMAS-------------IRRSS----------FLVPSSD  259 (320)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccc-------------ccCCC----------CCCCCHH
Confidence            013679999999888777654    45899999999999665210             00000          0124688


Q ss_pred             HHHHHHHHHhhc
Q 019878          213 DVVDGHIAAMEK  224 (334)
Q Consensus       213 D~a~a~~~~~~~  224 (334)
                      ++|+.++..+..
T Consensus       260 ~~A~~~~~~~~~  271 (320)
T PLN02780        260 GYARAALRWVGY  271 (320)
T ss_pred             HHHHHHHHHhCC
Confidence            999999988864

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.68  E-value=1.8e-15  Score=120.69  Aligned_cols=278  Identities=15%  Similarity=0.142  Sum_probs=175.6

Q ss_pred             EEEEcCCChhhHHHHH-----HHHhCC----CeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEec
Q 019878            3 ILVSGASGYLGGRLCH-----ALLKQG----HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (334)
Q Consensus         3 ilItG~tG~iG~~l~~-----~L~~~g----~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a   73 (334)
                      .++-+++|+|+.+|..     .+-+.+    |+|++++|++.+.       +++|-+.|..-..      -.++..+|++
T Consensus        15 a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~-------ritw~el~~~Gip------~sc~a~vna~   81 (315)
T KOG3019|consen   15 AVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKA-------RITWPELDFPGIP------ISCVAGVNAV   81 (315)
T ss_pred             CCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCc-------ccccchhcCCCCc------eehHHHHhhh
Confidence            3556889999988877     333333    8999999998764       3444433322211      1355556666


Q ss_pred             cccC-CCCCCccc-----chhhhhHHHHHHHHHHHhcCCCc-EEEEecccceeccCCCccCCCCCccccccccChHHHHH
Q 019878           74 ALVE-PWLPDPSR-----FFAVNVEGLKNVVQAAKETKTVE-KIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (334)
Q Consensus        74 ~~~~-~~~~~~~~-----~~~~n~~~~~~l~~~~~~~~~~~-~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK  146 (334)
                      +... .....+..     ...+.+..++.|+++........ .+|.+|..++|-+.....++|+...-.-   +.  .++
T Consensus        82 g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qgf---d~--~sr  156 (315)
T KOG3019|consen   82 GNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQGF---DI--LSR  156 (315)
T ss_pred             hhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCCh---HH--HHH
Confidence            5411 11122322     34455667889999998875554 6999999999987766556665544331   11  122


Q ss_pred             HHHHHHHHHHh-hcCCCEEEEecCceecCCCCCchhHHHHHHHH--HHcCCCCccccCCCCceeeeeHHHHHHHHHHHhh
Q 019878          147 AVADKIALQAA-SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIE--RFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAME  223 (334)
Q Consensus       147 ~~~E~~~~~~~-~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~  223 (334)
                      +..|-.-.... ....+++++|.|.|.|.+..    .+..++..  +-.|+   ..|+|.|...|||++|++..|..+++
T Consensus       157 L~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGG----a~~~M~lpF~~g~GG---PlGsG~Q~fpWIHv~DL~~li~~ale  229 (315)
T KOG3019|consen  157 LCLEWEGAALKANKDVRVALIRIGVVLGKGGG----ALAMMILPFQMGAGG---PLGSGQQWFPWIHVDDLVNLIYEALE  229 (315)
T ss_pred             HHHHHHHHhhccCcceeEEEEEEeEEEecCCc----chhhhhhhhhhccCC---cCCCCCeeeeeeehHHHHHHHHHHHh
Confidence            22222111111 23589999999999998643    22222222  22344   35889999999999999999999999


Q ss_pred             cCCCCCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechH
Q 019878          224 KGRSGERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCV  302 (334)
Q Consensus       224 ~~~~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  302 (334)
                      ++.-.++.|.. .+..+..|+++.+.++++++ .++++|......+          ++.-.     ..-.+.+.. +-+.
T Consensus       230 ~~~v~GViNgvAP~~~~n~Ef~q~lg~aL~Rp-~~~pvP~fvvqA~----------fG~er-----A~~vLeGqK-V~Pq  292 (315)
T KOG3019|consen  230 NPSVKGVINGVAPNPVRNGEFCQQLGSALSRP-SWLPVPDFVVQAL----------FGPER-----ATVVLEGQK-VLPQ  292 (315)
T ss_pred             cCCCCceecccCCCccchHHHHHHHHHHhCCC-cccCCcHHHHHHH----------hCccc-----eeEEeeCCc-ccch
Confidence            97655577775 57799999999999999876 4567777665432          22110     000011111 2456


Q ss_pred             HHHHhcCCCCC--CHHHHHHHHH
Q 019878          303 KAKTELGYNPR--SLKEGLQEVL  323 (334)
Q Consensus       303 k~~~~lG~~p~--~~~e~i~~~~  323 (334)
                      |++ ++||+.+  .+.+++++++
T Consensus       293 ral-~~Gf~f~yp~vk~Al~~i~  314 (315)
T KOG3019|consen  293 RAL-ELGFEFKYPYVKDALRAIM  314 (315)
T ss_pred             hHh-hcCceeechHHHHHHHHHh
Confidence            666 5899988  8999988765

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.67  E-value=2.2e-15  Score=129.72  Aligned_cols=210  Identities=15%  Similarity=0.110  Sum_probs=141.4

Q ss_pred             cEEEEcCC--ChhhHHHHHHHHhCCCeEEEEEcCCCCC---CCCC-CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTSDI---SGLP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~t--G~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+  +.||.++++.|+++|++|++++|+.+..   ..+. +.+.+.++.+|++|.+++.++++       .+|+
T Consensus        12 ~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ld~   91 (258)
T PRK07533         12 RGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGRLDF   91 (258)
T ss_pred             EEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999998  4999999999999999999999875421   1111 11235678999999988876653       4799


Q ss_pred             EEEeccccCC----------CCCCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEecccceeccCCCccCCCCCcccccc
Q 019878           69 IFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        69 vih~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~  137 (334)
                      +||+||....          ..++++..+++|+.++..+++.+..... -.++|++||.......+              
T Consensus        92 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~~--------------  157 (258)
T PRK07533         92 LLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVE--------------  157 (258)
T ss_pred             EEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCCc--------------
Confidence            9999997421          1123456889999999999998876521 24799999864321111              


Q ss_pred             ccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHH
Q 019878          138 FCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                      ..+.|+.+|++.+.+.+.+.    ++|+++..+.||.+-.+....... .......... ..+        ...+...+|
T Consensus       158 ~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~-~~p--------~~r~~~p~d  227 (258)
T PRK07533        158 NYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDD-FDALLEDAAE-RAP--------LRRLVDIDD  227 (258)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCC-cHHHHHHHHh-cCC--------cCCCCCHHH
Confidence            13679999998887777654    468999999999986652111000 1111111111 111        113567899


Q ss_pred             HHHHHHHHhhcC---CCCCeEEecC
Q 019878          214 VVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       214 ~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +++++..++...   -.|..+.+.|
T Consensus       228 va~~~~~L~s~~~~~itG~~i~vdg  252 (258)
T PRK07533        228 VGAVAAFLASDAARRLTGNTLYIDG  252 (258)
T ss_pred             HHHHHHHHhChhhccccCcEEeeCC
Confidence            999999998653   2577777743

>PRK05599 hypothetical protein; Provisional

Probab=99.67  E-value=1.8e-15  Score=129.27  Aligned_cols=197  Identities=17%  Similarity=0.224  Sum_probs=133.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CCC--CCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PSE--GALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~--~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      |++|||||++.||.++++.|. +|++|++++|+.++.+.+    ...  ..+.++.+|+.|.+++.++++       ++|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            889999999999999999998 599999999987644322    111  147889999999988876653       489


Q ss_pred             EEEEeccccCCC---CCC---cccchhhhhHHHHHHHHHH----HhcCCCcEEEEecccceeccCCCccCCCCCcccccc
Q 019878           68 VIFHTAALVEPW---LPD---PSRFFAVNVEGLKNVVQAA----KETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        68 ~vih~a~~~~~~---~~~---~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~  137 (334)
                      ++||+||.....   +.+   ......+|+.+...++..+    .+...-.++|++||...+-+...             
T Consensus        80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~-------------  146 (246)
T PRK05599         80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRA-------------  146 (246)
T ss_pred             EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcC-------------
Confidence            999999974321   111   2234567777776555444    33211358999999754422211             


Q ss_pred             ccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHH
Q 019878          138 FCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                       ...|+.+|.+.+.+.+.+.    .+|+++..+.||.+..+...               +..+.    +    -....+|
T Consensus       147 -~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~---------------~~~~~----~----~~~~pe~  202 (246)
T PRK05599        147 -NYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTT---------------GMKPA----P----MSVYPRD  202 (246)
T ss_pred             -CcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhc---------------CCCCC----C----CCCCHHH
Confidence             2569999998887777654    35899999999988654210               10000    0    0146899


Q ss_pred             HHHHHHHHhhcCCCCCeEEecC
Q 019878          214 VVDGHIAAMEKGRSGERYLLTG  235 (334)
Q Consensus       214 ~a~a~~~~~~~~~~g~~~~i~g  235 (334)
                      +|+++..++.....+..+.+.+
T Consensus       203 ~a~~~~~~~~~~~~~~~~~~~~  224 (246)
T PRK05599        203 VAAAVVSAITSSKRSTTLWIPG  224 (246)
T ss_pred             HHHHHHHHHhcCCCCceEEeCc
Confidence            9999999998765444555544

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.67  E-value=1.4e-15  Score=137.09  Aligned_cols=182  Identities=18%  Similarity=0.146  Sum_probs=123.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC-CC-CCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-LP-SEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~-~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~   78 (334)
                      ++++||||+|+||+++++.|.++|++|++++|++++... .. ....+..+.+|++|.+++.+.+.++|++||+||....
T Consensus       179 K~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi~~~  258 (406)
T PRK07424        179 KTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHGINVH  258 (406)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCCcCCC
Confidence            369999999999999999999999999999987653221 11 1124678899999999999999999999999987432


Q ss_pred             ---CCCCcccchhhhhHHHHHHHHHHHhcC---C---C-cEEEEecccceeccCCCccCCCCCccccccccChHHHHHHH
Q 019878           79 ---WLPDPSRFFAVNVEGLKNVVQAAKETK---T---V-EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAV  148 (334)
Q Consensus        79 ---~~~~~~~~~~~n~~~~~~l~~~~~~~~---~---~-~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~  148 (334)
                         ..++....+++|+.++.++++++.+..   +   . ..+|.+|+... .+ .              ....|+.||.+
T Consensus       259 ~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~~-~~-~--------------~~~~Y~ASKaA  322 (406)
T PRK07424        259 GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAEV-NP-A--------------FSPLYELSKRA  322 (406)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEccccc-cC-C--------------CchHHHHHHHH
Confidence               222446788999999999999986531   1   1 23555554211 10 0              12459999999


Q ss_pred             HHHHHHHHh-hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC
Q 019878          149 ADKIALQAA-SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR  226 (334)
Q Consensus       149 ~E~~~~~~~-~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~  226 (334)
                      .+.+..... ..++.+..+.|+    |.....             +           ....+..+|+|+.++.+++++.
T Consensus       323 l~~l~~l~~~~~~~~I~~i~~g----p~~t~~-------------~-----------~~~~~spe~vA~~il~~i~~~~  373 (406)
T PRK07424        323 LGDLVTLRRLDAPCVVRKLILG----PFKSNL-------------N-----------PIGVMSADWVAKQILKLAKRDF  373 (406)
T ss_pred             HHHHHHHHHhCCCCceEEEEeC----CCcCCC-------------C-----------cCCCCCHHHHHHHHHHHHHCCC
Confidence            888653322 234444444443    321110             0           0123678999999999998653

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.66  E-value=3.7e-15  Score=128.16  Aligned_cols=210  Identities=15%  Similarity=0.079  Sum_probs=139.7

Q ss_pred             cEEEEcCC--ChhhHHHHHHHHhCCCeEEEEEcCCCCCCC---CC---CCCCeEEEEcCCCChhhHHHHhc-------CC
Q 019878            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTSDISG---LP---SEGALELVYGDVTDYRSLVDACF-------GC   66 (334)
Q Consensus         2 ~ilItG~t--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~---~~~~v~~~~~Dl~d~~~~~~~~~-------~~   66 (334)
                      +++||||+  +.||.++++.|+++|++|++.+|+....+.   +.   ...++.++.+|++|.+++.++++       ++
T Consensus         9 ~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~l   88 (257)
T PRK08594          9 TYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEVGVI   88 (257)
T ss_pred             EEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCCCc
Confidence            58999997  899999999999999999998875422111   10   01357889999999988776653       38


Q ss_pred             CEEEEeccccCC-------CC---CCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEecccceeccCCCccCCCCCcccc
Q 019878           67 HVIFHTAALVEP-------WL---PDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEE  135 (334)
Q Consensus        67 d~vih~a~~~~~-------~~---~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~  135 (334)
                      |++||+||....       ..   +++...+++|+.+...+++++.+... ..++|++||....-..+            
T Consensus        89 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~------------  156 (257)
T PRK08594         89 HGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQ------------  156 (257)
T ss_pred             cEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCC------------
Confidence            999999986421       11   12334678899998888888776421 24899999865432111            


Q ss_pred             ccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeH
Q 019878          136 KYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHV  211 (334)
Q Consensus       136 ~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  211 (334)
                        ....|+.+|.+.+.+.+.+.    ++|+++..+.||.+-.+....... ...... ......+        ...+...
T Consensus       157 --~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~-~~~~~~-~~~~~~p--------~~r~~~p  224 (257)
T PRK08594        157 --NYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGG-FNSILK-EIEERAP--------LRRTTTQ  224 (257)
T ss_pred             --CCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhcc-ccHHHH-HHhhcCC--------ccccCCH
Confidence              12569999999888777654    458999999999987652110000 001111 1111111        1235678


Q ss_pred             HHHHHHHHHHhhcCC---CCCeEEecC
Q 019878          212 DDVVDGHIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       212 ~D~a~a~~~~~~~~~---~g~~~~i~g  235 (334)
                      +|+++++..++....   .|.++.+.|
T Consensus       225 ~~va~~~~~l~s~~~~~~tG~~~~~dg  251 (257)
T PRK08594        225 EEVGDTAAFLFSDLSRGVTGENIHVDS  251 (257)
T ss_pred             HHHHHHHHHHcCcccccccceEEEECC
Confidence            999999999887532   577777754

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.66  E-value=2.3e-15  Score=129.77  Aligned_cols=210  Identities=14%  Similarity=0.094  Sum_probs=138.5

Q ss_pred             cEEEEcC--CChhhHHHHHHHHhCCCeEEEEEcCCCC---CCCCC-CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGA--SGYLGGRLCHALLKQGHSVRALVRRTSD---ISGLP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~--tG~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||  ++.||.++++.|+++|++|++..|....   ...+. ..+....+++|++|.+++.++++       ++|+
T Consensus         8 ~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   87 (261)
T PRK08690          8 KILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDGLDG   87 (261)
T ss_pred             EEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCCCcE
Confidence            5999997  6799999999999999999998765321   11111 11234578999999998877663       4899


Q ss_pred             EEEeccccCCC-------C----CCcccchhhhhHHHHHHHHHHHhcC--CCcEEEEecccceeccCCCccCCCCCcccc
Q 019878           69 IFHTAALVEPW-------L----PDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEE  135 (334)
Q Consensus        69 vih~a~~~~~~-------~----~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~  135 (334)
                      +||+||.....       .    +++...+++|+.++..+.+.+....  .-.++|++||...+...+.           
T Consensus        88 lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~~~-----------  156 (261)
T PRK08690         88 LVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPN-----------  156 (261)
T ss_pred             EEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCCCC-----------
Confidence            99999975320       0    1233456889999888887765431  1247999998765432211           


Q ss_pred             ccccChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeH
Q 019878          136 KYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHV  211 (334)
Q Consensus       136 ~~~~~~Y~~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  211 (334)
                         ...|+.+|.+.+.+.+.+    .++|+++..+.||.+-.+....... ....... .....+        ...+..+
T Consensus       157 ---~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~-~~~~~~~-~~~~~p--------~~r~~~p  223 (261)
T PRK08690        157 ---YNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIAD-FGKLLGH-VAAHNP--------LRRNVTI  223 (261)
T ss_pred             ---cccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCc-hHHHHHH-HhhcCC--------CCCCCCH
Confidence               356999999988777654    3568999999999996652111000 0111111 111111        1236679


Q ss_pred             HHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          212 DDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       212 ~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +|+|+++..++...   ..|.++.+.|
T Consensus       224 eevA~~v~~l~s~~~~~~tG~~i~vdg  250 (261)
T PRK08690        224 EEVGNTAAFLLSDLSSGITGEITYVDG  250 (261)
T ss_pred             HHHHHHHHHHhCcccCCcceeEEEEcC
Confidence            99999999999753   2577777753

>PRK06484 short chain dehydrogenase; Validated

Probab=99.66  E-value=1.4e-15  Score=144.11  Aligned_cols=209  Identities=20%  Similarity=0.237  Sum_probs=142.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      ++|||||++.||.++++.|+++|++|++++|+.+....+..  ..++.++.+|++|++++.++++       ++|++||+
T Consensus         7 ~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~li~n   86 (520)
T PRK06484          7 VVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVLVNN   86 (520)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            59999999999999999999999999999998765332211  1256789999999988877663       48999999


Q ss_pred             ccccCC--------CCCCcccchhhhhHHHHHHHHHHHhcC---CC-cEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           73 AALVEP--------WLPDPSRFFAVNVEGLKNVVQAAKETK---TV-EKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        73 a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~-~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      ||...+        ..+++...+++|+.++..+++++.+..   +. .++|++||........+              ..
T Consensus        87 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~--------------~~  152 (520)
T PRK06484         87 AGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPK--------------RT  152 (520)
T ss_pred             CCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCC--------------Cc
Confidence            986321        122356688999999999999887652   22 38999999765543221              25


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHH
Q 019878          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVD  216 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  216 (334)
                      .|+.+|.+.+.+.+.+.    ..|++++.++|+.+-.+........ ............+        ...+...+|+++
T Consensus       153 ~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~--------~~~~~~~~~va~  223 (520)
T PRK06484        153 AYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERA-GKLDPSAVRSRIP--------LGRLGRPEEIAE  223 (520)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhccc-chhhhHHHHhcCC--------CCCCcCHHHHHH
Confidence            69999999998877654    3589999999998866532100000 0000000001111        112557899999


Q ss_pred             HHHHHhhcC---CCCCeEEe
Q 019878          217 GHIAAMEKG---RSGERYLL  233 (334)
Q Consensus       217 a~~~~~~~~---~~g~~~~i  233 (334)
                      ++..++...   ..|.++.+
T Consensus       224 ~v~~l~~~~~~~~~G~~~~~  243 (520)
T PRK06484        224 AVFFLASDQASYITGSTLVV  243 (520)
T ss_pred             HHHHHhCccccCccCceEEe
Confidence            999888643   13545444

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.65  E-value=1.1e-14  Score=125.35  Aligned_cols=205  Identities=16%  Similarity=0.097  Sum_probs=137.3

Q ss_pred             cEEEEcCCC--hhhHHHHHHHHhCCCeEEEEEcCCCCC---------------CCCCC-CCCeEEEEcCCCChhhHHHHh
Q 019878            2 KILVSGASG--YLGGRLCHALLKQGHSVRALVRRTSDI---------------SGLPS-EGALELVYGDVTDYRSLVDAC   63 (334)
Q Consensus         2 ~ilItG~tG--~iG~~l~~~L~~~g~~V~~~~r~~~~~---------------~~~~~-~~~v~~~~~Dl~d~~~~~~~~   63 (334)
                      ++|||||+|  .||.++++.|+++|++|+++.|+....               ..+.. ...+.++.+|++|.+++.+++
T Consensus         8 ~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~~~~   87 (256)
T PRK12859          8 VAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPKELL   87 (256)
T ss_pred             EEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHH
Confidence            599999995  799999999999999999876432100               00110 125778999999999887776


Q ss_pred             c-------CCCEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC---CCcEEEEecccceeccCCCccC
Q 019878           64 F-------GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIA  127 (334)
Q Consensus        64 ~-------~~d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~~~~~  127 (334)
                      +       .+|+|||+||....      ..++.+..+++|+.+...+.+.+.+..   ...++|++||.....+..    
T Consensus        88 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----  163 (256)
T PRK12859         88 NKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPMV----  163 (256)
T ss_pred             HHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCCC----
Confidence            3       37999999997422      112344578899999888865554331   245899999976543221    


Q ss_pred             CCCCccccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCC
Q 019878          128 DENQVHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGN  203 (334)
Q Consensus       128 ~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (334)
                                ....|+.+|.+.+.+.+.+.    ++|++++.++|+.+-.+...  ..     +........+       
T Consensus       164 ----------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~--~~-----~~~~~~~~~~-------  219 (256)
T PRK12859        164 ----------GELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT--EE-----IKQGLLPMFP-------  219 (256)
T ss_pred             ----------CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC--HH-----HHHHHHhcCC-------
Confidence                      13679999999998877754    35899999999988654211  11     1111111111       


Q ss_pred             CceeeeeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          204 DRFSFCHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       204 ~~~~~i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                       ...+...+|+++++..++...   -.|+++.+.|
T Consensus       220 -~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dg  253 (256)
T PRK12859        220 -FGRIGEPKDAARLIKFLASEEAEWITGQIIHSEG  253 (256)
T ss_pred             -CCCCcCHHHHHHHHHHHhCccccCccCcEEEeCC
Confidence             112456899999999887653   2577776643

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.65  E-value=3.9e-15  Score=128.28  Aligned_cols=210  Identities=14%  Similarity=0.114  Sum_probs=139.3

Q ss_pred             cEEEEcCCC--hhhHHHHHHHHhCCCeEEEEEcCCCC---CCCCCCC-CCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASG--YLGGRLCHALLKQGHSVRALVRRTSD---ISGLPSE-GALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG--~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~~~~~-~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      +++||||++  .||.++++.|+++|++|++.+|+...   ...+... +...++.+|++|.+++.++++       ++|+
T Consensus        10 ~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   89 (260)
T PRK06603         10 KGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGSFDF   89 (260)
T ss_pred             EEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCCccE
Confidence            489999997  79999999999999999998886321   1111111 123457899999988877663       3899


Q ss_pred             EEEeccccCC----------CCCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCcccccc
Q 019878           69 IFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        69 vih~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~  137 (334)
                      +||+||....          ..+++...+++|+.++..+++.+.... .-.++|++||.......+              
T Consensus        90 lVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~--------------  155 (260)
T PRK06603         90 LLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIP--------------  155 (260)
T ss_pred             EEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCC--------------
Confidence            9999986321          112345578999999999998876542 124899999865432111              


Q ss_pred             ccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHH
Q 019878          138 FCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                      ....|+.+|++.+.+.+.+.    ++|+++..+.||.+-.+....... ........ ....+        ...+...+|
T Consensus       156 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~-~~~~~~~~-~~~~p--------~~r~~~ped  225 (260)
T PRK06603        156 NYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGD-FSTMLKSH-AATAP--------LKRNTTQED  225 (260)
T ss_pred             cccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCC-cHHHHHHH-HhcCC--------cCCCCCHHH
Confidence            12569999998887777654    468999999999986542110000 01111111 11111        112567899


Q ss_pred             HHHHHHHHhhcC---CCCCeEEecC
Q 019878          214 VVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       214 ~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +++++..++...   -.|..+.+.|
T Consensus       226 va~~~~~L~s~~~~~itG~~i~vdg  250 (260)
T PRK06603        226 VGGAAVYLFSELSKGVTGEIHYVDC  250 (260)
T ss_pred             HHHHHHHHhCcccccCcceEEEeCC
Confidence            999999998753   2577777753

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.65  E-value=3e-15  Score=129.74  Aligned_cols=211  Identities=14%  Similarity=0.110  Sum_probs=141.4

Q ss_pred             cEEEEcCC--ChhhHHHHHHHHhCCCeEEEEEcCCC---CCCCCCC-CCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTS---DISGLPS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~t--G~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+  +.||.++++.|+++|++|++..|+..   ....+.. .+....+.+|++|.+++.++++       .+|+
T Consensus        12 ~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~   91 (272)
T PRK08159         12 RGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGKLDF   91 (272)
T ss_pred             EEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCCCcE
Confidence            49999997  89999999999999999998887632   1111111 1235678999999988877653       4899


Q ss_pred             EEEeccccCC----------CCCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCcccccc
Q 019878           69 IFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        69 vih~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~  137 (334)
                      +||+||....          ..+++...+++|+.++..+++.+.... .-.++|++||.......+              
T Consensus        92 lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~p--------------  157 (272)
T PRK08159         92 VVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMP--------------  157 (272)
T ss_pred             EEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCCC--------------
Confidence            9999997421          112356688999999999999887652 125899999864332111              


Q ss_pred             ccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHH
Q 019878          138 FCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                      ....|+.+|++.+.+.+.+.    ++|+++..+.||.+..+....... . ...........+        ...+...+|
T Consensus       158 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~-~-~~~~~~~~~~~p--------~~r~~~pee  227 (272)
T PRK08159        158 HYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGD-F-RYILKWNEYNAP--------LRRTVTIEE  227 (272)
T ss_pred             cchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCc-c-hHHHHHHHhCCc--------ccccCCHHH
Confidence            13569999998887777654    458999999999986542110000 0 001111111111        112567899


Q ss_pred             HHHHHHHHhhcC---CCCCeEEecCC
Q 019878          214 VVDGHIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       214 ~a~a~~~~~~~~---~~g~~~~i~g~  236 (334)
                      ++++++.++...   ..|.++.+.|.
T Consensus       228 vA~~~~~L~s~~~~~itG~~i~vdgG  253 (272)
T PRK08159        228 VGDSALYLLSDLSRGVTGEVHHVDSG  253 (272)
T ss_pred             HHHHHHHHhCccccCccceEEEECCC
Confidence            999999998753   25778888643

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.65  E-value=5.7e-15  Score=127.23  Aligned_cols=210  Identities=14%  Similarity=0.104  Sum_probs=139.0

Q ss_pred             cEEEEcCCC--hhhHHHHHHHHhCCCeEEEEEcCCC---CCCCCCC-CCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASG--YLGGRLCHALLKQGHSVRALVRRTS---DISGLPS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG--~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||++  .||.++++.|+++|++|++.+|+..   ..+.+.. .+.+.++.+|++|.+++.++++       .+|+
T Consensus         8 ~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~   87 (262)
T PRK07984          8 RILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPKFDG   87 (262)
T ss_pred             EEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCCCCE
Confidence            599999986  8999999999999999999888631   1111111 1246678999999998877663       3799


Q ss_pred             EEEeccccCCC-----------CCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCccccc
Q 019878           69 IFHTAALVEPW-----------LPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (334)
Q Consensus        69 vih~a~~~~~~-----------~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~  136 (334)
                      +||+||.....           .++++..+++|+.+...+.+++.... .-.++|++||.....+.+             
T Consensus        88 linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~-------------  154 (262)
T PRK07984         88 FVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIP-------------  154 (262)
T ss_pred             EEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCC-------------
Confidence            99999974211           11234567889999888888875431 124899999865432111             


Q ss_pred             cccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHH
Q 019878          137 YFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVD  212 (334)
Q Consensus       137 ~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  212 (334)
                       ....|+.+|.+.+.+.+.+.    ++|+++..+.||.+-.+....... ....... .....+        ...+...+
T Consensus       155 -~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~-~~~~~~~-~~~~~p--------~~r~~~pe  223 (262)
T PRK07984        155 -NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKD-FRKMLAH-CEAVTP--------IRRTVTIE  223 (262)
T ss_pred             -CcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCc-hHHHHHH-HHHcCC--------CcCCCCHH
Confidence             12569999999988887754    358999999999886542100000 0111111 111111        12356789


Q ss_pred             HHHHHHHHHhhcC---CCCCeEEecC
Q 019878          213 DVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       213 D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      |+++++..++...   ..|.++.+.|
T Consensus       224 dva~~~~~L~s~~~~~itG~~i~vdg  249 (262)
T PRK07984        224 DVGNSAAFLCSDLSAGISGEVVHVDG  249 (262)
T ss_pred             HHHHHHHHHcCcccccccCcEEEECC
Confidence            9999999998753   2577777754

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.65  E-value=2.8e-15  Score=129.97  Aligned_cols=210  Identities=13%  Similarity=0.087  Sum_probs=140.1

Q ss_pred             cEEEEcCC--ChhhHHHHHHHHhCCCeEEEEEcCCC---CCCCCC-CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTS---DISGLP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~t--G~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+  +.||.++++.|+++|++|++.+|+..   ....+. ....-.++.+|++|.+++.++++       ++|+
T Consensus         7 ~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~iDi   86 (274)
T PRK08415          7 KGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGKIDF   86 (274)
T ss_pred             EEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            58999997  79999999999999999999988742   111111 00111578999999988876653       4799


Q ss_pred             EEEeccccCC----------CCCCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEecccceeccCCCccCCCCCcccccc
Q 019878           69 IFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        69 vih~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~  137 (334)
                      +||+||....          ..+++...+++|+.++..+.+++..... -.++|++||.......+              
T Consensus        87 lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~--------------  152 (274)
T PRK08415         87 IVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVP--------------  152 (274)
T ss_pred             EEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCC--------------
Confidence            9999997421          1123456889999999999998876521 24899999864332111              


Q ss_pred             ccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHH
Q 019878          138 FCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                      ....|+.+|++.+.+.+.+.    ++|+++..+.||.+..+....... ... .........|        ...+...+|
T Consensus       153 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~-~~~-~~~~~~~~~p--------l~r~~~ped  222 (274)
T PRK08415        153 HYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGD-FRM-ILKWNEINAP--------LKKNVSIEE  222 (274)
T ss_pred             cchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccch-hhH-HhhhhhhhCc--------hhccCCHHH
Confidence            13569999998877777654    468999999999987642110000 000 0000001111        123567899


Q ss_pred             HHHHHHHHhhcC---CCCCeEEecC
Q 019878          214 VVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       214 ~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +++++..++...   ..|.++.+.|
T Consensus       223 va~~v~fL~s~~~~~itG~~i~vdG  247 (274)
T PRK08415        223 VGNSGMYLLSDLSSGVTGEIHYVDA  247 (274)
T ss_pred             HHHHHHHHhhhhhhcccccEEEEcC
Confidence            999999998743   3677777754

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.65  E-value=2.5e-15  Score=129.30  Aligned_cols=210  Identities=13%  Similarity=0.102  Sum_probs=141.1

Q ss_pred             cEEEEcCC--ChhhHHHHHHHHhCCCeEEEEEcCCCCC------CCCCC-CCCeEEEEcCCCChhhHHHHhc-------C
Q 019878            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTSDI------SGLPS-EGALELVYGDVTDYRSLVDACF-------G   65 (334)
Q Consensus         2 ~ilItG~t--G~iG~~l~~~L~~~g~~V~~~~r~~~~~------~~~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~   65 (334)
                      +++||||+  +.||.++++.|+++|++|++..|+.+..      ..+.. ...+.++.+|++|.+++.++++       .
T Consensus         8 ~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~   87 (258)
T PRK07370          8 KALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQKWGK   87 (258)
T ss_pred             EEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHHcCC
Confidence            48999986  7999999999999999998887654321      11111 1246788999999998876663       4


Q ss_pred             CCEEEEeccccC------C----CCCCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEecccceeccCCCccCCCCCccc
Q 019878           66 CHVIFHTAALVE------P----WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHE  134 (334)
Q Consensus        66 ~d~vih~a~~~~------~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~Ss~~v~~~~~~~~~~e~~~~~  134 (334)
                      +|++||+||...      +    ..++++..+++|+.++..+++++.+... -.++|++||.....+.+           
T Consensus        88 iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~-----------  156 (258)
T PRK07370         88 LDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIP-----------  156 (258)
T ss_pred             CCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCCc-----------
Confidence            899999999642      1    1123456889999999999988875421 25899999865432111           


Q ss_pred             cccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeee
Q 019878          135 EKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCH  210 (334)
Q Consensus       135 ~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  210 (334)
                         ....|+.+|.+.+.+.+.+.    ++|+++..+.||.+-.+......+ ....... .....+        ...+..
T Consensus       157 ---~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~-~~~~~~~-~~~~~p--------~~r~~~  223 (258)
T PRK07370        157 ---NYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGG-ILDMIHH-VEEKAP--------LRRTVT  223 (258)
T ss_pred             ---ccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhcccc-chhhhhh-hhhcCC--------cCcCCC
Confidence               13669999999888887754    458999999999997653110000 0111111 111111        123666


Q ss_pred             HHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          211 VDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       211 v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      .+|++.++..++...   -.|+++.+.|
T Consensus       224 ~~dva~~~~fl~s~~~~~~tG~~i~vdg  251 (258)
T PRK07370        224 QTEVGNTAAFLLSDLASGITGQTIYVDA  251 (258)
T ss_pred             HHHHHHHHHHHhChhhccccCcEEEECC
Confidence            899999999998753   2577777743

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.64  E-value=7.7e-15  Score=126.41  Aligned_cols=210  Identities=12%  Similarity=0.063  Sum_probs=139.2

Q ss_pred             cEEEEcC--CChhhHHHHHHHHhCCCeEEEEEcCC---CCCCCCC-CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGA--SGYLGGRLCHALLKQGHSVRALVRRT---SDISGLP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~--tG~iG~~l~~~L~~~g~~V~~~~r~~---~~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||  ++.||.++++.|+++|++|++.+|..   +....+. ..+....+.+|++|.+++.++++       .+|+
T Consensus         8 ~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   87 (260)
T PRK06997          8 RILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDGLDG   87 (260)
T ss_pred             EEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCCCcE
Confidence            5999996  67999999999999999999886542   1111111 11123468899999998877763       4899


Q ss_pred             EEEeccccCC-----------CCCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCccccc
Q 019878           69 IFHTAALVEP-----------WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (334)
Q Consensus        69 vih~a~~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~  136 (334)
                      +||+||....           ..+++...+++|+.++..+.+++.+.. .-.++|++||.......+             
T Consensus        88 lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~~-------------  154 (260)
T PRK06997         88 LVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVP-------------  154 (260)
T ss_pred             EEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCCC-------------
Confidence            9999997431           112344578899999999999987753 125899999865432111             


Q ss_pred             cccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHH
Q 019878          137 YFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVD  212 (334)
Q Consensus       137 ~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  212 (334)
                       ....|+.+|++.+.+.+.+.    ++|+++..+.||.+-.+....... ....... .....+        ...+..++
T Consensus       155 -~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~-~~~~~~~-~~~~~p--------~~r~~~pe  223 (260)
T PRK06997        155 -NYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKD-FGKILDF-VESNAP--------LRRNVTIE  223 (260)
T ss_pred             -CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccc-hhhHHHH-HHhcCc--------ccccCCHH
Confidence             12569999998887777654    458999999999886642110000 0111111 111111        11256799


Q ss_pred             HHHHHHHHHhhcC---CCCCeEEecC
Q 019878          213 DVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       213 D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      |+++++..++...   -.|.++.+.|
T Consensus       224 dva~~~~~l~s~~~~~itG~~i~vdg  249 (260)
T PRK06997        224 EVGNVAAFLLSDLASGVTGEITHVDS  249 (260)
T ss_pred             HHHHHHHHHhCccccCcceeEEEEcC
Confidence            9999999998753   2577777753

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.63  E-value=1.7e-15  Score=128.10  Aligned_cols=156  Identities=22%  Similarity=0.203  Sum_probs=116.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC--------CCCCCeEEEEcCCCChhhHHHHh-------cCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL--------PSEGALELVYGDVTDYRSLVDAC-------FGC   66 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~~v~~~~~Dl~d~~~~~~~~-------~~~   66 (334)
                      .|+||||++.||.+++..|.++|.+++.+.|...+.+.+        .. .++..+++|++|.+++.+.+       .++
T Consensus        14 vVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~-~~v~~~~~Dvs~~~~~~~~~~~~~~~fg~v   92 (282)
T KOG1205|consen   14 VVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSL-EKVLVLQLDVSDEESVKKFVEWAIRHFGRV   92 (282)
T ss_pred             EEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCc-CccEEEeCccCCHHHHHHHHHHHHHhcCCC
Confidence            599999999999999999999999988888877655433        11 15999999999999988665       358


Q ss_pred             CEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC---CCcEEEEecccceeccCCCccCCCCCcccccc
Q 019878           67 HVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        67 d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~  137 (334)
                      |++||+||+...      ...+....+++|+.|+..+.+++..+.   +-.++|.+||..-+-..+.             
T Consensus        93 DvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~-------------  159 (282)
T KOG1205|consen   93 DVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPF-------------  159 (282)
T ss_pred             CEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCc-------------
Confidence            999999998432      122344588999999999999886652   2358999999766544332             


Q ss_pred             ccChHHHHHHHHHHHHHHHhh----cCCCEE-EEecCcee
Q 019878          138 FCTQYERSKAVADKIALQAAS----EGLPIV-PVYPGVIY  172 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~~~~----~g~~~~-ilR~~~v~  172 (334)
                       .+.|+.||++.+.+...+.+    .+..+. ++-||.|-
T Consensus       160 -~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~  198 (282)
T KOG1205|consen  160 -RSIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIE  198 (282)
T ss_pred             -ccccchHHHHHHHHHHHHHHHhhccCceEEEEEecCcee
Confidence             24699999988877776653    232222 46777664

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.63  E-value=8.8e-15  Score=125.79  Aligned_cols=210  Identities=17%  Similarity=0.113  Sum_probs=138.3

Q ss_pred             cEEEEcC--CChhhHHHHHHHHhCCCeEEEEEcCCC--CCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGA--SGYLGGRLCHALLKQGHSVRALVRRTS--DISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~--tG~iG~~l~~~L~~~g~~V~~~~r~~~--~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      +++||||  ++.||.++++.|+++|++|++++|+..  ..+.+..  ...+.++.+|++|.+++.++++       ++|+
T Consensus         9 ~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~iD~   88 (256)
T PRK07889          9 RILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDGLDG   88 (256)
T ss_pred             EEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            5999999  899999999999999999999987642  1111110  1257789999999988876653       4899


Q ss_pred             EEEeccccCC-------CCC---CcccchhhhhHHHHHHHHHHHhcCC-CcEEEEecccceeccCCCccCCCCCcccccc
Q 019878           69 IFHTAALVEP-------WLP---DPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        69 vih~a~~~~~-------~~~---~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~  137 (334)
                      +||+||....       .+.   +....+++|+.++..+++.+..... -.++|++|+....+.               +
T Consensus        89 li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~~~---------------~  153 (256)
T PRK07889         89 VVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATVAW---------------P  153 (256)
T ss_pred             EEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecccccC---------------C
Confidence            9999997421       111   2334689999999999888876521 247888875321110               0


Q ss_pred             ccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHH
Q 019878          138 FCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                      ....|+.+|+..+.+.+.+.    ++|+++..+.||.+-.+....... .... ........+       ..+.+...+|
T Consensus       154 ~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~-~~~~-~~~~~~~~p-------~~~~~~~p~e  224 (256)
T PRK07889        154 AYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPG-FELL-EEGWDERAP-------LGWDVKDPTP  224 (256)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccC-cHHH-HHHHHhcCc-------cccccCCHHH
Confidence            12569999998887776643    468999999999997653111000 0011 111111111       0113567999


Q ss_pred             HHHHHHHHhhcC---CCCCeEEecC
Q 019878          214 VVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       214 ~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +|+++..++...   ..|.++.+.|
T Consensus       225 vA~~v~~l~s~~~~~~tG~~i~vdg  249 (256)
T PRK07889        225 VARAVVALLSDWFPATTGEIVHVDG  249 (256)
T ss_pred             HHHHHHHHhCcccccccceEEEEcC
Confidence            999999998753   2577777754

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.62  E-value=2.4e-14  Score=111.70  Aligned_cols=206  Identities=21%  Similarity=0.222  Sum_probs=148.0

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC----CCCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEEE
Q 019878            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS----GLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (334)
Q Consensus         3 ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih   71 (334)
                      .+||||+..||+++++.|...|++|.+.+++....+    .+...++-..+.+|+.+.+++...++       .+++++|
T Consensus        17 ~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psvlVn   96 (256)
T KOG1200|consen   17 AAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSVLVN   96 (256)
T ss_pred             eEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcEEEE
Confidence            789999999999999999999999999998865432    34443466778999999888766553       3899999


Q ss_pred             eccccCC------CCCCcccchhhhhHHHHHHHHHHHhc-----CCCcEEEEecccce-eccCCCccCCCCCcccccccc
Q 019878           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET-----KTVEKIIYTSSFFA-LGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~~v~~Ss~~v-~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      |||+...      ..++++..+.+|+.|+..+.+++.+.     ...-++|.+||+-- .|+..               .
T Consensus        97 cAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~G---------------Q  161 (256)
T KOG1200|consen   97 CAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFG---------------Q  161 (256)
T ss_pred             cCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccccccc---------------c
Confidence            9998432      34678889999999999999998776     11238999999532 22221               2


Q ss_pred             ChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          140 TQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       140 ~~Y~~sK~----~~E~~~~~~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      +.|+.+|.    ......++..++++++..+-||.|-.|...   ..-+.++.+....-+...+         -..+|+|
T Consensus       162 tnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~---~mp~~v~~ki~~~iPmgr~---------G~~EevA  229 (256)
T KOG1200|consen  162 TNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTE---AMPPKVLDKILGMIPMGRL---------GEAEEVA  229 (256)
T ss_pred             hhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhh---hcCHHHHHHHHccCCcccc---------CCHHHHH
Confidence            55888776    344455666678999999999999887532   2223444444444443333         3489999


Q ss_pred             HHHHHHhhcC---CCCCeEEecC
Q 019878          216 DGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       216 ~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      .+++.+....   -.|..+.++|
T Consensus       230 ~~V~fLAS~~ssYiTG~t~evtG  252 (256)
T KOG1200|consen  230 NLVLFLASDASSYITGTTLEVTG  252 (256)
T ss_pred             HHHHHHhccccccccceeEEEec
Confidence            9998887432   2477777754

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.61  E-value=3e-15  Score=132.46  Aligned_cols=214  Identities=16%  Similarity=0.096  Sum_probs=136.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCC----CC-CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~----~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      +++||||++.||.++++.|+++| ++|++++|+.++...    +. ....+.++.+|++|.+++.++++       ++|+
T Consensus         5 ~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~   84 (314)
T TIGR01289         5 TVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPLDA   84 (314)
T ss_pred             EEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            59999999999999999999999 999999997653321    11 11257888999999988766653       4899


Q ss_pred             EEEeccccCCC-------CCCcccchhhhhHHHHHHHHHHHhc----C-CCcEEEEecccceeccCCC----ccCCCCC-
Q 019878           69 IFHTAALVEPW-------LPDPSRFFAVNVEGLKNVVQAAKET----K-TVEKIIYTSSFFALGSTDG----YIADENQ-  131 (334)
Q Consensus        69 vih~a~~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~~v~~Ss~~v~~~~~~----~~~~e~~-  131 (334)
                      +||+||.....       .++.+..+++|+.++..+++.+...    + +..++|++||...+.....    .+.+..+ 
T Consensus        85 lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~  164 (314)
T TIGR01289        85 LVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANLGDL  164 (314)
T ss_pred             EEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCccccccc
Confidence            99999974321       1234557899999988887776553    1 1359999999877542110    0000000 


Q ss_pred             --------------ccccccccChHHHHHHHHHHHHHHHhh-----cCCCEEEEecCceecCC-CCCchhHHHHHHHHHH
Q 019878          132 --------------VHEEKYFCTQYERSKAVADKIALQAAS-----EGLPIVPVYPGVIYGPG-KLTTGNLVAKLMIERF  191 (334)
Q Consensus       132 --------------~~~~~~~~~~Y~~sK~~~E~~~~~~~~-----~g~~~~ilR~~~v~G~~-~~~~~~~~~~~~~~~~  191 (334)
                                    ...+..+...|+.||++.....+.+.+     .|+.++.++||.|.... ...........+....
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~~~~~  244 (314)
T TIGR01289       165 SGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLFPPFQ  244 (314)
T ss_pred             ccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHHHHHH
Confidence                          001112346799999997776665532     47999999999985321 1111111111111000


Q ss_pred             cCCCCccccCCCCceeeeeHHHHHHHHHHHhhcC
Q 019878          192 NGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG  225 (334)
Q Consensus       192 ~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~  225 (334)
                      ..    .      ...+..+++.++.++.++...
T Consensus       245 ~~----~------~~~~~~~~~~a~~l~~~~~~~  268 (314)
T TIGR01289       245 KY----I------TKGYVSEEEAGERLAQVVSDP  268 (314)
T ss_pred             HH----H------hccccchhhhhhhhHHhhcCc
Confidence            00    0      012467899999999887653

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.59  E-value=3.6e-14  Score=113.55  Aligned_cols=219  Identities=17%  Similarity=0.096  Sum_probs=155.2

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCCCCC
Q 019878            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLPD   82 (334)
Q Consensus         3 ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~~~   82 (334)
                      .|+.|+.||.|+++++.-.+.++.|.++.|+..+.-.-.....++++.+|.....-+...+.++..++-+++-.    .+
T Consensus        55 tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggf----gn  130 (283)
T KOG4288|consen   55 TLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQTLSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGF----GN  130 (283)
T ss_pred             HhhhcCCCcchHHHHHHHHhhceeeeEeecccCcchhhCCCcccchhhccccccCcchhhhcCCcccHHHhcCc----cc
Confidence            67899999999999999999999999999986532221222468889999888777788888888888887632    45


Q ss_pred             cccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHhhcCCC
Q 019878           83 PSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLP  162 (334)
Q Consensus        83 ~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~  162 (334)
                      ...+...|-....+-.+++++. ++++|+|+|-. -||-.+..             .+.|-.+|+++|.-+...  ++++
T Consensus       131 ~~~m~~ing~ani~a~kaa~~~-gv~~fvyISa~-d~~~~~~i-------------~rGY~~gKR~AE~Ell~~--~~~r  193 (283)
T KOG4288|consen  131 IILMDRINGTANINAVKAAAKA-GVPRFVYISAH-DFGLPPLI-------------PRGYIEGKREAEAELLKK--FRFR  193 (283)
T ss_pred             hHHHHHhccHhhHHHHHHHHHc-CCceEEEEEhh-hcCCCCcc-------------chhhhccchHHHHHHHHh--cCCC
Confidence            5677788999999999999998 89999999943 33322211             256999999999877663  5688


Q ss_pred             EEEEecCceecCCCCCc----hhHHHHHHHHHHcCC---CCccccCCCCceeeeeHHHHHHHHHHHhhcCCCCCeEEecC
Q 019878          163 IVPVYPGVIYGPGKLTT----GNLVAKLMIERFNGR---LPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTG  235 (334)
Q Consensus       163 ~~ilR~~~v~G~~~~~~----~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g~~~~i~g  235 (334)
                      -++||||.+||.+.-..    ...+...+.+..+..   .-.+.--+.-....+.+++||.+.+.+++.++-.++     
T Consensus       194 giilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp~f~Gv-----  268 (283)
T KOG4288|consen  194 GIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDPDFKGV-----  268 (283)
T ss_pred             ceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCCCcCce-----
Confidence            99999999999843111    111222222222221   111222345677899999999999999998864344     


Q ss_pred             CCCCHHHHHHHHHH
Q 019878          236 ENASFMQIFDMAAV  249 (334)
Q Consensus       236 ~~~s~~e~~~~i~~  249 (334)
                        +++.|+.+...+
T Consensus       269 --v~i~eI~~~a~k  280 (283)
T KOG4288|consen  269 --VTIEEIKKAAHK  280 (283)
T ss_pred             --eeHHHHHHHHHH
Confidence              456666655443

>PLN00015 protochlorophyllide reductase

Probab=99.56  E-value=3.3e-14  Score=125.55  Aligned_cols=220  Identities=17%  Similarity=0.107  Sum_probs=135.5

Q ss_pred             EEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCC----CCC-CCCeEEEEcCCCChhhHHHHhc-------CCCEEE
Q 019878            4 LVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISG----LPS-EGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (334)
Q Consensus         4 lItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~----~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vi   70 (334)
                      |||||++.||.++++.|+++| ++|++++|+.+....    +.. ...+.++.+|+.|.+++.++++       .+|++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            699999999999999999999 999999997653221    111 1257888999999998776653       479999


Q ss_pred             EeccccCC-------CCCCcccchhhhhHHHHHHHHHHHhcC---C--CcEEEEecccceeccCC-C--cc---CC----
Q 019878           71 HTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---T--VEKIIYTSSFFALGSTD-G--YI---AD----  128 (334)
Q Consensus        71 h~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~--~~~~v~~Ss~~v~~~~~-~--~~---~~----  128 (334)
                      |+||....       ..++.+..+++|+.++..+++.+.+..   +  ..++|++||...+-... .  .+   ..    
T Consensus        81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~  160 (308)
T PLN00015         81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG  160 (308)
T ss_pred             ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhhh
Confidence            99997421       112345688999999888877665531   2  36999999976542110 0  00   00    


Q ss_pred             ------CCCc-----cccccccChHHHHHHHHHHHHHHHh----h-cCCCEEEEecCceecCCC-CCchhHHHHHHHHHH
Q 019878          129 ------ENQV-----HEEKYFCTQYERSKAVADKIALQAA----S-EGLPIVPVYPGVIYGPGK-LTTGNLVAKLMIERF  191 (334)
Q Consensus       129 ------e~~~-----~~~~~~~~~Y~~sK~~~E~~~~~~~----~-~g~~~~ilR~~~v~G~~~-~~~~~~~~~~~~~~~  191 (334)
                            +...     .....+...|+.||++.+...+.+.    + .|+.++.+.||.|....- ..........+ ...
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~-~~~  239 (308)
T PLN00015        161 LAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLF-PPF  239 (308)
T ss_pred             hhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHH-HHH
Confidence                  0000     0011234679999998666555443    2 489999999999954221 11011110000 000


Q ss_pred             cCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC---CCCeEEe
Q 019878          192 NGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR---SGERYLL  233 (334)
Q Consensus       192 ~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~---~g~~~~i  233 (334)
                      .. .+        ...+..+++.|+.++.++....   .|.+|..
T Consensus       240 ~~-~~--------~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~  275 (308)
T PLN00015        240 QK-YI--------TKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSW  275 (308)
T ss_pred             HH-HH--------hcccccHHHhhhhhhhhccccccCCCcccccc
Confidence            00 00        0124568999999988776532   3544443

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.55  E-value=1.5e-14  Score=113.97  Aligned_cols=159  Identities=18%  Similarity=0.175  Sum_probs=120.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-CCCCeEEEEcCCCChhhHHHHhc-------CCCEEEEec
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-SEGALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~a   73 (334)
                      +||||||+..||..|+++|.+.|.+|++.+|+.....+.+ ..+.+..+.+|+.|.++.++..+       ..+++||+|
T Consensus         7 TiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvliNNA   86 (245)
T COG3967           7 TILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLINNA   86 (245)
T ss_pred             EEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheeeecc
Confidence            4999999999999999999999999999999987665432 23578889999999987665543       379999999


Q ss_pred             cccCC---C-C----CCcccchhhhhHHHHHHHHHHHhcC---CCcEEEEecccceeccCCCccCCCCCccccccccChH
Q 019878           74 ALVEP---W-L----PDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (334)
Q Consensus        74 ~~~~~---~-~----~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y  142 (334)
                      |++..   . .    .+.++-..+|+.++.+|..+...+-   .-.-+|.+||.-.+-+....|.              |
T Consensus        87 GIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~Pv--------------Y  152 (245)
T COG3967          87 GIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPV--------------Y  152 (245)
T ss_pred             cccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCccccccc--------------c
Confidence            98532   1 1    1224466789999999999887762   1235999999777766555444              9


Q ss_pred             HHHHHHHHHHHHHHh---h-cCCCEEEEecCceecC
Q 019878          143 ERSKAVADKIALQAA---S-EGLPIVPVYPGVIYGP  174 (334)
Q Consensus       143 ~~sK~~~E~~~~~~~---~-~g~~~~ilR~~~v~G~  174 (334)
                      +.+|++.-.+-..+.   + .++.++=+-|+.|-.+
T Consensus       153 caTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         153 CATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             hhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            999998766555543   2 3678888888888654

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.54  E-value=1.1e-13  Score=116.08  Aligned_cols=193  Identities=17%  Similarity=0.169  Sum_probs=135.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vi   70 (334)
                      .||||||++.+|+.++.+++++|.++++.|.+.....+    ....+.+..+.+|+++.+++.+..+       ++|++|
T Consensus        40 ~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V~ILV  119 (300)
T KOG1201|consen   40 IVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDVDILV  119 (300)
T ss_pred             EEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCceEEE
Confidence            48999999999999999999999999899988764322    1111358899999999988766543       489999


Q ss_pred             EeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccCh
Q 019878           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (334)
Q Consensus        71 h~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  141 (334)
                      |+||.+..      ..+..+..+++|+.+.....++....   .+-.++|.++|...+-+..+              ...
T Consensus       120 NNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~g--------------l~~  185 (300)
T KOG1201|consen  120 NNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAG--------------LAD  185 (300)
T ss_pred             eccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCcc--------------chh
Confidence            99998532      12234568899998887766665443   14469999998765543332              256


Q ss_pred             HHHHHHHHHHHHHH----Hh---hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          142 YERSKAVADKIALQ----AA---SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       142 Y~~sK~~~E~~~~~----~~---~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      |+.||.++.-..+.    +.   ..|++++.+.|+.+=.       ++    +    .+..+     -......+..+.+
T Consensus       186 YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~T-------gm----f----~~~~~-----~~~l~P~L~p~~v  245 (300)
T KOG1201|consen  186 YCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINT-------GM----F----DGATP-----FPTLAPLLEPEYV  245 (300)
T ss_pred             hhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccc-------cc----c----CCCCC-----CccccCCCCHHHH
Confidence            99999977544433    32   3479999999987731       11    1    11111     1234467889999


Q ss_pred             HHHHHHHhhcCCCC
Q 019878          215 VDGHIAAMEKGRSG  228 (334)
Q Consensus       215 a~a~~~~~~~~~~g  228 (334)
                      |+.|..++.....+
T Consensus       246 a~~Iv~ai~~n~~~  259 (300)
T KOG1201|consen  246 AKRIVEAILTNQAG  259 (300)
T ss_pred             HHHHHHHHHcCCcc
Confidence            99999999875443

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.54  E-value=2.2e-13  Score=116.01  Aligned_cols=201  Identities=16%  Similarity=0.142  Sum_probs=134.8

Q ss_pred             HHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc----CCCEEEEeccccCCCCCCcccchhhhh
Q 019878           16 LCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF----GCHVIFHTAALVEPWLPDPSRFFAVNV   91 (334)
Q Consensus        16 l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----~~d~vih~a~~~~~~~~~~~~~~~~n~   91 (334)
                      +++.|+++|++|++++|+.++..      ..+++.+|++|.+++.++++    ++|+|||+||...  ..+++..+++|+
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~--~~~~~~~~~vN~   72 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPG--TAPVELVARVNF   72 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCC--CCCHHHhhhhch
Confidence            47889999999999999876532      24678899999999888775    4899999999753  245678899999


Q ss_pred             HHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCC----C-c--------cccccccChHHHHHHHHHHHHHHHh
Q 019878           92 EGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADEN----Q-V--------HEEKYFCTQYERSKAVADKIALQAA  157 (334)
Q Consensus        92 ~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~----~-~--------~~~~~~~~~Y~~sK~~~E~~~~~~~  157 (334)
                      .++..+++.+.+.. ...++|++||...|+.....+..+.    . .        ..+....+.|+.+|.+.+.+.+.+.
T Consensus        73 ~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la  152 (241)
T PRK12428         73 LGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQA  152 (241)
T ss_pred             HHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHHH
Confidence            99999999998752 1259999999988864321111110    0 0        0122235789999999987776544


Q ss_pred             -----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC---CCC
Q 019878          158 -----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR---SGE  229 (334)
Q Consensus       158 -----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~---~g~  229 (334)
                           ++|+++..++||.+.++...........   .......       .....+...+|+++++..++....   .|.
T Consensus       153 ~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~---~~~~~~~-------~~~~~~~~pe~va~~~~~l~s~~~~~~~G~  222 (241)
T PRK12428        153 QPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQ---ERVDSDA-------KRMGRPATADEQAAVLVFLCSDAARWINGV  222 (241)
T ss_pred             HHhhhccCeEEEEeecCCccCcccccchhhhhh---Hhhhhcc-------cccCCCCCHHHHHHHHHHHcChhhcCccCc
Confidence                 3589999999999988742211000000   0000000       011125678999999999886432   465


Q ss_pred             eEEec
Q 019878          230 RYLLT  234 (334)
Q Consensus       230 ~~~i~  234 (334)
                      ...+.
T Consensus       223 ~i~vd  227 (241)
T PRK12428        223 NLPVD  227 (241)
T ss_pred             EEEec
Confidence            55554

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.52  E-value=1e-13  Score=121.98  Aligned_cols=161  Identities=17%  Similarity=0.156  Sum_probs=113.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC-------CC-------CCCC-CCeEEEEcCCCChhhHHHHhc--
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-------SG-------LPSE-GALELVYGDVTDYRSLVDACF--   64 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~~-------~~~~-~~v~~~~~Dl~d~~~~~~~~~--   64 (334)
                      ++|||||++.||.++++.|++.|++|++++|+..+.       +.       +... ..+.++.+|+.|.+++.++++  
T Consensus        10 ~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~   89 (305)
T PRK08303         10 VALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALVERI   89 (305)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            599999999999999999999999999999975321       00       1110 246789999999988877653  


Q ss_pred             -----CCCEEEEec-ccc------CC-C---CCCcccchhhhhHHHHHHHHHHHhcC---CCcEEEEecccce-eccCCC
Q 019878           65 -----GCHVIFHTA-ALV------EP-W---LPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFA-LGSTDG  124 (334)
Q Consensus        65 -----~~d~vih~a-~~~------~~-~---~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~Ss~~v-~~~~~~  124 (334)
                           .+|++||+| |..      .+ .   .++....+++|+.+...+++++.+..   +-.++|++||... +.....
T Consensus        90 ~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~~~~  169 (305)
T PRK08303         90 DREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNATHY  169 (305)
T ss_pred             HHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccccCcCC
Confidence                 489999999 632      11 1   11234467889998888888776542   2358999998543 211110


Q ss_pred             ccCCCCCccccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecC
Q 019878          125 YIADENQVHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGP  174 (334)
Q Consensus       125 ~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~  174 (334)
                                  .....|+.+|.+...+.+.+.    ++|+++..+.||.+-.+
T Consensus       170 ------------~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~  211 (305)
T PRK08303        170 ------------RLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSE  211 (305)
T ss_pred             ------------CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccH
Confidence                        012569999998888776543    45899999999988543

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.51  E-value=5.8e-14  Score=111.14  Aligned_cols=159  Identities=22%  Similarity=0.236  Sum_probs=124.7

Q ss_pred             cEEEEcC-CChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc--------CCCEEEEe
Q 019878            2 KILVSGA-SGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--------~~d~vih~   72 (334)
                      +|||||+ .|.||.+|++++.++|+.|++..|+.++.+.+....++.....|+++++++.+...        +.|++||+
T Consensus         9 ~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L~NN   88 (289)
T KOG1209|consen    9 KVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLLYNN   88 (289)
T ss_pred             eEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEEEcC
Confidence            5899976 58899999999999999999999999888777655578999999999998876642        37999999


Q ss_pred             ccc--cCC----CCCCcccchhhhhHHHHHHHHHHHhc--CCCcEEEEecccceeccCCCccCCCCCccccccccChHHH
Q 019878           73 AAL--VEP----WLPDPSRFFAVNVEGLKNVVQAAKET--KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (334)
Q Consensus        73 a~~--~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (334)
                      ||.  ..+    ..++.++.+++|+.|..++.++..+.  ..-..+|+++|..+|-+.+-              .+.|..
T Consensus        89 AG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf--------------~~iYsA  154 (289)
T KOG1209|consen   89 AGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPF--------------GSIYSA  154 (289)
T ss_pred             CCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccch--------------hhhhhH
Confidence            996  222    23345679999999998888887643  11237999999988875542              367999


Q ss_pred             HHHHHHHHHHHHh----hcCCCEEEEecCceecC
Q 019878          145 SKAVADKIALQAA----SEGLPIVPVYPGVIYGP  174 (334)
Q Consensus       145 sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~  174 (334)
                      ||++.-.+.+.+.    ..|++++.+-+|.|-..
T Consensus       155 sKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~  188 (289)
T KOG1209|consen  155 SKAAIHAYARTLRLELKPFGVRVINAITGGVATD  188 (289)
T ss_pred             HHHHHHHhhhhcEEeeeccccEEEEecccceecc
Confidence            9998877776643    45888998888877653

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.51  E-value=1.5e-13  Score=115.72  Aligned_cols=157  Identities=15%  Similarity=0.047  Sum_probs=112.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC----C-CCCeEEEEcCCCChhhHHHHh-------c-CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S-EGALELVYGDVTDYRSLVDAC-------F-GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~-~~~v~~~~~Dl~d~~~~~~~~-------~-~~d~   68 (334)
                      +++||||++.||.++++.|+++|++|++++|+.++.+.+.    . ..++..+.+|+.|.+++.+++       . .+|+
T Consensus         7 ~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~iD~   86 (227)
T PRK08862          7 IILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRAPDV   86 (227)
T ss_pred             EEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCCCCE
Confidence            5999999999999999999999999999999876532211    1 125678889999998887654       3 5899


Q ss_pred             EEEeccccC---CC-CC---CcccchhhhhHHHHHHHHHHHh----cCCCcEEEEecccceeccCCCccCCCCCcccccc
Q 019878           69 IFHTAALVE---PW-LP---DPSRFFAVNVEGLKNVVQAAKE----TKTVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        69 vih~a~~~~---~~-~~---~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~  137 (334)
                      +||+||...   +. ..   +....+.+|+.++..+++.+..    .+.-.++|++||...+.                 
T Consensus        87 li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~-----------------  149 (227)
T PRK08862         87 LVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDHQ-----------------  149 (227)
T ss_pred             EEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCCC-----------------
Confidence            999997522   11 11   2233556787777766655543    22235899999854221                 


Q ss_pred             ccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 019878          138 FCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~  175 (334)
                      +...|+.+|...+.+.+.+.    ++|+++..+.||.+-.+.
T Consensus       150 ~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~  191 (227)
T PRK08862        150 DLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANG  191 (227)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCC
Confidence            02569999998887776654    458999999999887763

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.50  E-value=6.2e-13  Score=114.10  Aligned_cols=215  Identities=17%  Similarity=0.161  Sum_probs=143.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC--------CCCCeEEEEcCCCChhhHHHHh--------c
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP--------SEGALELVYGDVTDYRSLVDAC--------F   64 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~v~~~~~Dl~d~~~~~~~~--------~   64 (334)
                      +.+|||||+..||.++++.|++.|.+|++.+|+.+......        ..+++..+.+|+.+.+...+++        .
T Consensus         9 kvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~G   88 (270)
T KOG0725|consen    9 KVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKFFG   88 (270)
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHhCC
Confidence            35899999999999999999999999999999877532211        1135889999999887655544        3


Q ss_pred             CCCEEEEeccccCC-------CCCCcccchhhhhHH-HHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcc
Q 019878           65 GCHVIFHTAALVEP-------WLPDPSRFFAVNVEG-LKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVH  133 (334)
Q Consensus        65 ~~d~vih~a~~~~~-------~~~~~~~~~~~n~~~-~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~  133 (334)
                      +.|++||+||....       .++.++..+++|+.| +..+.+++..+   .+...++++||...+......        
T Consensus        89 kidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~--------  160 (270)
T KOG0725|consen   89 KIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGS--------  160 (270)
T ss_pred             CCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCC--------
Confidence            48999999997432       234567788999994 66666666554   123478888887655433211        


Q ss_pred             ccccccChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCC-chhHHHHHHHHHHcCCCCccccCCCCceee
Q 019878          134 EEKYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLT-TGNLVAKLMIERFNGRLPGYIGYGNDRFSF  208 (334)
Q Consensus       134 ~~~~~~~~Y~~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (334)
                           ...|+.+|.+.+++.+..    .++|+++..+-|+.+..+.... ........+.+....+...      ..-.+
T Consensus       161 -----~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~------p~gr~  229 (270)
T KOG0725|consen  161 -----GVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAV------PLGRV  229 (270)
T ss_pred             -----cccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhcccccc------ccCCc
Confidence                 035999999988877764    4679999999999998875110 0000001111110011111      11236


Q ss_pred             eeHHHHHHHHHHHhhcCC---CCCeEEec
Q 019878          209 CHVDDVVDGHIAAMEKGR---SGERYLLT  234 (334)
Q Consensus       209 i~v~D~a~a~~~~~~~~~---~g~~~~i~  234 (334)
                      .-.+|+++++..++....   .|+...+.
T Consensus       230 g~~~eva~~~~fla~~~asyitG~~i~vd  258 (270)
T KOG0725|consen  230 GTPEEVAEAAAFLASDDASYITGQTIIVD  258 (270)
T ss_pred             cCHHHHHHhHHhhcCcccccccCCEEEEe
Confidence            679999999998877642   46666554

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.50  E-value=3.5e-13  Score=117.37  Aligned_cols=207  Identities=19%  Similarity=0.172  Sum_probs=137.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----C---CCCCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----L---PSEGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~---~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      +++|||||+.||.++++.|+.+|.+|+...|+..+...    +   ....++.++.+|+.|..++.+..+       ..|
T Consensus        37 ~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~~ld  116 (314)
T KOG1208|consen   37 VALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEGPLD  116 (314)
T ss_pred             EEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCCCcc
Confidence            58999999999999999999999999999998743211    1   111378889999999998877653       379


Q ss_pred             EEEEeccccCCC----CCCcccchhhhhHHHHHHHHHHHhcC---CCcEEEEecccceeccCC--CccCCCCCc-ccccc
Q 019878           68 VIFHTAALVEPW----LPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTD--GYIADENQV-HEEKY  137 (334)
Q Consensus        68 ~vih~a~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~--~~~~~e~~~-~~~~~  137 (334)
                      ++||+||++...    .+..+..+.+|..|...|.+.....-   .-.|+|++||..- +...  .....+... ..   
T Consensus       117 vLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~~~~l~~~~~~~~~---  192 (314)
T KOG1208|consen  117 VLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKIDLKDLSGEKAKLYS---  192 (314)
T ss_pred             EEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccchhhccchhccCcc---
Confidence            999999985442    23467788999988877776664431   2269999999754 1111  111111110 11   


Q ss_pred             ccChHHHHHHHHHHHHHHHhh---cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          138 FCTQYERSKAVADKIALQAAS---EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~~~~---~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      ....|+.||.+......++.+   .|+.+..+.||.+.+++-.. ...+...+...+....   .         -..++-
T Consensus       193 ~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r-~~~~~~~l~~~l~~~~---~---------ks~~~g  259 (314)
T KOG1208|consen  193 SDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSR-VNLLLRLLAKKLSWPL---T---------KSPEQG  259 (314)
T ss_pred             chhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceec-chHHHHHHHHHHHHHh---c---------cCHHHH
Confidence            112599999988888877763   28999999999998875432 2223333322221111   1         125666


Q ss_pred             HHHHHHHhhcC
Q 019878          215 VDGHIAAMEKG  225 (334)
Q Consensus       215 a~a~~~~~~~~  225 (334)
                      |+....++.++
T Consensus       260 a~t~~~~a~~p  270 (314)
T KOG1208|consen  260 AATTCYAALSP  270 (314)
T ss_pred             hhheehhccCc
Confidence            77777776665

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.50  E-value=9.9e-13  Score=114.89  Aligned_cols=210  Identities=11%  Similarity=0.073  Sum_probs=133.5

Q ss_pred             cEEEEcC--CChhhHHHHHHHHhCCCeEEEEEcCCCCCCC---------------CCCC---CCeEEEEcCC--CChh--
Q 019878            2 KILVSGA--SGYLGGRLCHALLKQGHSVRALVRRTSDISG---------------LPSE---GALELVYGDV--TDYR--   57 (334)
Q Consensus         2 ~ilItG~--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------------~~~~---~~v~~~~~Dl--~d~~--   57 (334)
                      ++|||||  +..||.++++.|++.|.+|++ .|..+..+.               +...   .....+.+|+  .+.+  
T Consensus        11 ~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   89 (303)
T PLN02730         11 RAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDTPEDV   89 (303)
T ss_pred             EEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCccccC
Confidence            5999999  799999999999999999988 554222110               0000   1146788898  3222  


Q ss_pred             ----------------hHHHHh-------cCCCEEEEecccc----CC----CCCCcccchhhhhHHHHHHHHHHHhcCC
Q 019878           58 ----------------SLVDAC-------FGCHVIFHTAALV----EP----WLPDPSRFFAVNVEGLKNVVQAAKETKT  106 (334)
Q Consensus        58 ----------------~~~~~~-------~~~d~vih~a~~~----~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~  106 (334)
                                      ++.+++       .++|++||+||..    .+    ..+++...+++|+.++..+++++.....
T Consensus        90 ~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m~  169 (303)
T PLN02730         90 PEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMN  169 (303)
T ss_pred             chhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence                            444443       2489999999742    11    1234566889999999999999877621


Q ss_pred             -CcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHh----h-cCCCEEEEecCceecCCCCCch
Q 019878          107 -VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA----S-EGLPIVPVYPGVIYGPGKLTTG  180 (334)
Q Consensus       107 -~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~-~g~~~~ilR~~~v~G~~~~~~~  180 (334)
                       -.++|++||.......+..             ...|+.+|.+.+.+.+.+.    + +|+++..+-||.+-.+......
T Consensus       170 ~~G~II~isS~a~~~~~p~~-------------~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~  236 (303)
T PLN02730        170 PGGASISLTYIASERIIPGY-------------GGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIG  236 (303)
T ss_pred             cCCEEEEEechhhcCCCCCC-------------chhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhccc
Confidence             1589999986543221110             1359999999888777654    3 5899999999988765321100


Q ss_pred             hHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          181 NLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                       ........ .....+        ...+...+|++.++..++...   ..|.++.+.|
T Consensus       237 -~~~~~~~~-~~~~~p--------l~r~~~peevA~~~~fLaS~~a~~itG~~l~vdG  284 (303)
T PLN02730        237 -FIDDMIEY-SYANAP--------LQKELTADEVGNAAAFLASPLASAITGATIYVDN  284 (303)
T ss_pred             -ccHHHHHH-HHhcCC--------CCCCcCHHHHHHHHHHHhCccccCccCCEEEECC
Confidence             00111111 111111        012456899999999998643   2577777743

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.49  E-value=1.5e-13  Score=110.18  Aligned_cols=206  Identities=21%  Similarity=0.196  Sum_probs=139.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC------CCCCCCCeEEEEcCCCChhhHHHHhcC-------CCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS------GLPSEGALELVYGDVTDYRSLVDACFG-------CHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------~~~~~~~v~~~~~Dl~d~~~~~~~~~~-------~d~   68 (334)
                      .+++|||.|.||..++++|+++|..+.+++-+.++..      .......+.|+++|+++..++++++++       +|+
T Consensus         7 na~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~iDI   86 (261)
T KOG4169|consen    7 NALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGTIDI   86 (261)
T ss_pred             eEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCceEE
Confidence            4899999999999999999999988888777655432      222224799999999999888887753       799


Q ss_pred             EEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcC------CCcEEEEecccceeccCCCccCCCCCccccccccChH
Q 019878           69 IFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK------TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (334)
Q Consensus        69 vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~------~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y  142 (334)
                      +||.||....  .+++..+.+|+.|..+--..+..+.      ...-+|..||..-..+.+-.              ..|
T Consensus        87 lINgAGi~~d--kd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~--------------pVY  150 (261)
T KOG4169|consen   87 LINGAGILDD--KDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVF--------------PVY  150 (261)
T ss_pred             EEcccccccc--hhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccc--------------hhh
Confidence            9999998653  7889999999988877666665542      22369999995433333322              449


Q ss_pred             HHHHHHH----HHH--HHHHhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHc-CCCCccc---cCCCCceeeeeHH
Q 019878          143 ERSKAVA----DKI--ALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFN-GRLPGYI---GYGNDRFSFCHVD  212 (334)
Q Consensus       143 ~~sK~~~----E~~--~~~~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~i~v~  212 (334)
                      +.||+..    ..+  ...+.+.|+++..+.|+.+-..           ++..... +..+..-   .+.-.+..-....
T Consensus       151 ~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~-----------l~~~~~~~~~~~e~~~~~~~~l~~~~~q~~~  219 (261)
T KOG4169|consen  151 AASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTD-----------LAENIDASGGYLEYSDSIKEALERAPKQSPA  219 (261)
T ss_pred             hhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHH-----------HHHHHHhcCCcccccHHHHHHHHHcccCCHH
Confidence            9999832    221  1223457999999999976431           1111100 1111000   0000011123478


Q ss_pred             HHHHHHHHHhhcCCCCCeEEec
Q 019878          213 DVVDGHIAAMEKGRSGERYLLT  234 (334)
Q Consensus       213 D~a~a~~~~~~~~~~g~~~~i~  234 (334)
                      ++++.+..+++.+..|.+|.++
T Consensus       220 ~~a~~~v~aiE~~~NGaiw~v~  241 (261)
T KOG4169|consen  220 CCAINIVNAIEYPKNGAIWKVD  241 (261)
T ss_pred             HHHHHHHHHHhhccCCcEEEEe
Confidence            8999999999998899999996

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.48  E-value=3e-14  Score=114.25  Aligned_cols=143  Identities=23%  Similarity=0.283  Sum_probs=110.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcC--CCCCCC----CC-CCCCeEEEEcCCCChhhHHHHhc-------CC
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRR--TSDISG----LP-SEGALELVYGDVTDYRSLVDACF-------GC   66 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~--~~~~~~----~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~   66 (334)
                      ++|||||+|-||.++++.|+++| +.|++++|+  .+....    +. ...++.++++|+++.+++.++++       ..
T Consensus         2 ~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~l   81 (167)
T PF00106_consen    2 TVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGPL   81 (167)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSSE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            68999999999999999999995 678888888  221111    11 11378999999999988877764       48


Q ss_pred             CEEEEeccccCC-C-----CCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           67 HVIFHTAALVEP-W-----LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        67 d~vih~a~~~~~-~-----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      |++||+||.... .     .++....++.|+.+...+.+++... +-.++|++||.....+.+.              ..
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~g~iv~~sS~~~~~~~~~--------------~~  146 (167)
T PF00106_consen   82 DILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQ-GGGKIVNISSIAGVRGSPG--------------MS  146 (167)
T ss_dssp             SEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHH-TTEEEEEEEEGGGTSSSTT--------------BH
T ss_pred             cccccccccccccccccccchhhhhccccccceeeeeeehheec-cccceEEecchhhccCCCC--------------Ch
Confidence            999999998542 1     1234568899999999999999994 5679999999766643332              36


Q ss_pred             hHHHHHHHHHHHHHHHhhc
Q 019878          141 QYERSKAVADKIALQAASE  159 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~~~  159 (334)
                      .|+.+|.+.+.+.+.+.++
T Consensus       147 ~Y~askaal~~~~~~la~e  165 (167)
T PF00106_consen  147 AYSASKAALRGLTQSLAAE  165 (167)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHh
Confidence            6999999999998887643

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.47  E-value=5.7e-14  Score=119.67  Aligned_cols=205  Identities=21%  Similarity=0.196  Sum_probs=141.5

Q ss_pred             cCC--ChhhHHHHHHHHhCCCeEEEEEcCCCCC----CCCCCCCCeEEEEcCCCChhhHHHHh--------cCCCEEEEe
Q 019878            7 GAS--GYLGGRLCHALLKQGHSVRALVRRTSDI----SGLPSEGALELVYGDVTDYRSLVDAC--------FGCHVIFHT   72 (334)
Q Consensus         7 G~t--G~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~~v~~~~~Dl~d~~~~~~~~--------~~~d~vih~   72 (334)
                      |++  +.||.++++.|+++|++|++++|+.++.    ..+....+.+++.+|+++.+++.+++        .++|++||+
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~   80 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN   80 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence            666  9999999999999999999999998752    11111123457999999998877764        458999999


Q ss_pred             ccccCC-----C-----CCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCccccccccCh
Q 019878           73 AALVEP-----W-----LPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (334)
Q Consensus        73 a~~~~~-----~-----~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  141 (334)
                      ++....     .     .+++...++.|+.+...+++++.+.. .-.++|++||.......+.              ...
T Consensus        81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~--------------~~~  146 (241)
T PF13561_consen   81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPG--------------YSA  146 (241)
T ss_dssp             EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTT--------------THH
T ss_pred             ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCcc--------------chh
Confidence            987432     1     12345678899999999999886541 1247999998755433221              257


Q ss_pred             HHHHHHHHHHHHHH----Hhh-cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHH
Q 019878          142 YERSKAVADKIALQ----AAS-EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVD  216 (334)
Q Consensus       142 Y~~sK~~~E~~~~~----~~~-~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  216 (334)
                      |+.+|.+.+.+.+.    +.+ +|+++..+.||.+..+.... ......+........+.         ..+...+|+|+
T Consensus       147 y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~-~~~~~~~~~~~~~~~pl---------~r~~~~~evA~  216 (241)
T PF13561_consen  147 YSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTER-IPGNEEFLEELKKRIPL---------GRLGTPEEVAN  216 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHH-HHTHHHHHHHHHHHSTT---------SSHBEHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhc-cccccchhhhhhhhhcc---------CCCcCHHHHHH
Confidence            99999988887776    457 79999999999997652100 00112222222222221         12557999999


Q ss_pred             HHHHHhhcC---CCCCeEEecC
Q 019878          217 GHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       217 a~~~~~~~~---~~g~~~~i~g  235 (334)
                      ++..++...   -+|++..+.|
T Consensus       217 ~v~fL~s~~a~~itG~~i~vDG  238 (241)
T PF13561_consen  217 AVLFLASDAASYITGQVIPVDG  238 (241)
T ss_dssp             HHHHHHSGGGTTGTSEEEEEST
T ss_pred             HHHHHhCccccCccCCeEEECC
Confidence            999999865   2688888754

...

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.46  E-value=8.6e-13  Score=111.10  Aligned_cols=198  Identities=24%  Similarity=0.302  Sum_probs=137.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC-------CCeEEEEcCCCChhhHHHHhcC-------CC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-------GALELVYGDVTDYRSLVDACFG-------CH   67 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-------~~v~~~~~Dl~d~~~~~~~~~~-------~d   67 (334)
                      +|+||||+..||..++..+..+|++|.++.|+..+..++..+       .++.+..+|+.|++++..++++       +|
T Consensus        35 hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~d  114 (331)
T KOG1210|consen   35 HILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPID  114 (331)
T ss_pred             eEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCcc
Confidence            599999999999999999999999999999998764332211       3477999999999998887753       79


Q ss_pred             EEEEeccccCC--C----CCCcccchhhhhHHHHHHHHHHHhcCC----CcEEEEecccceeccCCCccCCCCCcccccc
Q 019878           68 VIFHTAALVEP--W----LPDPSRFFAVNVEGLKNVVQAAKETKT----VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        68 ~vih~a~~~~~--~----~~~~~~~~~~n~~~~~~l~~~~~~~~~----~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~  137 (334)
                      .+|||||..-+  .    .+..+..+++|..++.+++.++.....    ..+++.+||...--+-.+.            
T Consensus       115 ~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~Gy------------  182 (331)
T KOG1210|consen  115 NLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGY------------  182 (331)
T ss_pred             eEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccc------------
Confidence            99999997322  1    123355889999999999998876532    2278888875433222221            


Q ss_pred             ccChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHH
Q 019878          138 FCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       138 ~~~~Y~~sK~----~~E~~~~~~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                        +.|..+|.    +++.+-++..++|+.++..-|+.+-.||-.. .+           ...|....--+..-+.+..++
T Consensus       183 --saYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~-En-----------~tkP~~t~ii~g~ss~~~~e~  248 (331)
T KOG1210|consen  183 --SAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFER-EN-----------KTKPEETKIIEGGSSVIKCEE  248 (331)
T ss_pred             --cccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCcccc-cc-----------ccCchheeeecCCCCCcCHHH
Confidence              44655555    6666666766789999999999998886211 01           011111100112224578999


Q ss_pred             HHHHHHHHhhcC
Q 019878          214 VVDGHIAAMEKG  225 (334)
Q Consensus       214 ~a~a~~~~~~~~  225 (334)
                      +|.+++.-+.+.
T Consensus       249 ~a~~~~~~~~rg  260 (331)
T KOG1210|consen  249 MAKAIVKGMKRG  260 (331)
T ss_pred             HHHHHHhHHhhc
Confidence            999999877753

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.44  E-value=9.2e-12  Score=110.35  Aligned_cols=226  Identities=21%  Similarity=0.166  Sum_probs=137.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC----CCCeEEEEcCCCChhhH-HHHhcC----CCEEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS----EGALELVYGDVTDYRSL-VDACFG----CHVIFH   71 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~v~~~~~Dl~d~~~~-~~~~~~----~d~vih   71 (334)
                      ++|||+||||.+|+-+++.|+++|+.|+++.|+......+..    ......+..|.....+. ..+.+.    ..+++-
T Consensus        80 ~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~~v~~  159 (411)
T KOG1203|consen   80 TTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGVVIVIK  159 (411)
T ss_pred             CeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccccceeEEe
Confidence            469999999999999999999999999999999876654422    12344455554443332 223222    335555


Q ss_pred             eccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHH
Q 019878           72 TAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADK  151 (334)
Q Consensus        72 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~  151 (334)
                      +++-... +++...-.++...|++|++++|+.. +++|+|++||++.--.....+....        ...+-.+|..+|+
T Consensus       160 ~~ggrp~-~ed~~~p~~VD~~g~knlvdA~~~a-Gvk~~vlv~si~~~~~~~~~~~~~~--------~~~~~~~k~~~e~  229 (411)
T KOG1203|consen  160 GAGGRPE-EEDIVTPEKVDYEGTKNLVDACKKA-GVKRVVLVGSIGGTKFNQPPNILLL--------NGLVLKAKLKAEK  229 (411)
T ss_pred             cccCCCC-cccCCCcceecHHHHHHHHHHHHHh-CCceEEEEEeecCcccCCCchhhhh--------hhhhhHHHHhHHH
Confidence            5543221 1233344578899999999999998 8999999987644322221111000        1234478889999


Q ss_pred             HHHHHhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC-CC-C
Q 019878          152 IALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR-SG-E  229 (334)
Q Consensus       152 ~~~~~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-~g-~  229 (334)
                      ++.+   .|++++|+|++...-..... .   ..    ...+..-...+++.  --.+.-.|+|+..+.++.+.. .+ .
T Consensus       230 ~~~~---Sgl~ytiIR~g~~~~~~~~~-~---~~----~~~~~~~~~~~~~~--~~~i~r~~vael~~~all~~~~~~~k  296 (411)
T KOG1203|consen  230 FLQD---SGLPYTIIRPGGLEQDTGGQ-R---EV----VVDDEKELLTVDGG--AYSISRLDVAELVAKALLNEAATFKK  296 (411)
T ss_pred             HHHh---cCCCcEEEeccccccCCCCc-c---ee----cccCcccccccccc--ceeeehhhHHHHHHHHHhhhhhccce
Confidence            8886   89999999999876431100 0   00    00111111111111  136788999999999988764 23 3


Q ss_pred             eEEe-cC---CCCCHHHHHHHHHH
Q 019878          230 RYLL-TG---ENASFMQIFDMAAV  249 (334)
Q Consensus       230 ~~~i-~g---~~~s~~e~~~~i~~  249 (334)
                      +..+ ..   ....+.++.+.+..
T Consensus       297 ~~~~v~~~~gpg~~~~~l~~~~~~  320 (411)
T KOG1203|consen  297 VVELVLKPEGPGRPYKVLLELFPL  320 (411)
T ss_pred             eEEeecCCCCCCccHHHHHhhccc
Confidence            3333 31   23456666555543

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.41  E-value=5.9e-12  Score=96.88  Aligned_cols=154  Identities=23%  Similarity=0.245  Sum_probs=118.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~   78 (334)
                      |..+|.||||-.|+.+.+.+++.+  -+|+++.|++.......  ..+.....|....+++...+.++|+.+.+-|-...
T Consensus        19 ~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at~--k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLgTTRg   96 (238)
T KOG4039|consen   19 MSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPATD--KVVAQVEVDFSKLSQLATNEQGPDVLFCALGTTRG   96 (238)
T ss_pred             cceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcccc--ceeeeEEechHHHHHHHhhhcCCceEEEeeccccc
Confidence            569999999999999999999987  58999999864322222  26777888999989999999999999988886443


Q ss_pred             CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHhh
Q 019878           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS  158 (334)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~  158 (334)
                      - ...+-++++.-.....++++|++. ++++|+.+||.+.-....                =.|-..|-..|+-+.++.-
T Consensus        97 k-aGadgfykvDhDyvl~~A~~AKe~-Gck~fvLvSS~GAd~sSr----------------FlY~k~KGEvE~~v~eL~F  158 (238)
T KOG4039|consen   97 K-AGADGFYKVDHDYVLQLAQAAKEK-GCKTFVLVSSAGADPSSR----------------FLYMKMKGEVERDVIELDF  158 (238)
T ss_pred             c-cccCceEeechHHHHHHHHHHHhC-CCeEEEEEeccCCCcccc----------------eeeeeccchhhhhhhhccc
Confidence            2 124556677777778889999997 899999999975443221                2377888888887777431


Q ss_pred             cCCCEEEEecCceecCCC
Q 019878          159 EGLPIVPVYPGVIYGPGK  176 (334)
Q Consensus       159 ~g~~~~ilR~~~v~G~~~  176 (334)
                        -.++|+|||.+.|...
T Consensus       159 --~~~~i~RPG~ll~~R~  174 (238)
T KOG4039|consen  159 --KHIIILRPGPLLGERT  174 (238)
T ss_pred             --cEEEEecCcceecccc
Confidence              1389999999999764

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.40  E-value=1.4e-12  Score=105.82  Aligned_cols=153  Identities=28%  Similarity=0.343  Sum_probs=109.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCC-CCCCC------CCC-CCCeEEEEcCCCChhhHHHHhcC-------
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRT-SDISG------LPS-EGALELVYGDVTDYRSLVDACFG-------   65 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~-~~~~~------~~~-~~~v~~~~~Dl~d~~~~~~~~~~-------   65 (334)
                      ++|||||+|.||..+++.|.++| .+++++.|+. .....      +.. ...+.++.+|++|++++.+++++       
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            58999999999999999999997 5899999983 22110      111 13689999999999999988753       


Q ss_pred             CCEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccce-eccCCCccCCCCCccccccc
Q 019878           66 CHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA-LGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        66 ~d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v-~~~~~~~~~~e~~~~~~~~~  138 (334)
                      ++.|||+|+....      ...+....+..-+.++.+|.++.... ....||.+||... +|...               
T Consensus        82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~-~l~~~i~~SSis~~~G~~g---------------  145 (181)
T PF08659_consen   82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR-PLDFFILFSSISSLLGGPG---------------  145 (181)
T ss_dssp             EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT-TTSEEEEEEEHHHHTT-TT---------------
T ss_pred             cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC-CCCeEEEECChhHhccCcc---------------
Confidence            6899999997432      11123446677899999999999886 7889999999764 55443               


Q ss_pred             cChHHHHHHHHHHHHHHHhhcCCCEEEEecCc
Q 019878          139 CTQYERSKAVADKIALQAASEGLPIVPVYPGV  170 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~~~g~~~~ilR~~~  170 (334)
                      .+.|+..-...+.+.+.....|.+++.+..+.
T Consensus       146 q~~YaaAN~~lda~a~~~~~~g~~~~sI~wg~  177 (181)
T PF08659_consen  146 QSAYAAANAFLDALARQRRSRGLPAVSINWGA  177 (181)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-E
T ss_pred             hHhHHHHHHHHHHHHHHHHhCCCCEEEEEccc
Confidence            25699999998888887767789988887654

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.39  E-value=4.9e-12  Score=106.80  Aligned_cols=157  Identities=20%  Similarity=0.198  Sum_probs=117.7

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC---CCCeEEEEcCCCChhhHHHHhc---------CCCEEE
Q 019878            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS---EGALELVYGDVTDYRSLVDACF---------GCHVIF   70 (334)
Q Consensus         3 ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~v~~~~~Dl~d~~~~~~~~~---------~~d~vi   70 (334)
                      |||||+-...|..|+++|.++|+.|.+-...++..+.+..   .+....+..|+++++++.++.+         +--.||
T Consensus        32 VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gLwglV  111 (322)
T KOG1610|consen   32 VLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGLWGLV  111 (322)
T ss_pred             EEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccccceeEE
Confidence            9999999999999999999999999998866554332221   3577888999999999888763         367999


Q ss_pred             EeccccCC-------CCCCcccchhhhhHHHHHHHHHHHhcC--CCcEEEEecccceeccCCCccCCCCCccccccccCh
Q 019878           71 HTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (334)
Q Consensus        71 h~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  141 (334)
                      |+||+...       ..+++...+++|+.|+.++..+....-  .-.|+|++||..-  ....+            ...+
T Consensus       112 NNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~G--R~~~p------------~~g~  177 (322)
T KOG1610|consen  112 NNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLG--RVALP------------ALGP  177 (322)
T ss_pred             eccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccccc--CccCc------------cccc
Confidence            99996322       223566788999999988888775430  1239999999643  11111            1377


Q ss_pred             HHHHHHHHHHHHHHHh----hcCCCEEEEecCceecC
Q 019878          142 YERSKAVADKIALQAA----SEGLPIVPVYPGVIYGP  174 (334)
Q Consensus       142 Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~  174 (334)
                      |+.||.+.|.....+.    ..|+++.++-|| +|-.
T Consensus       178 Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG-~f~T  213 (322)
T KOG1610|consen  178 YCVSKFAVEAFSDSLRRELRPFGVKVSIIEPG-FFKT  213 (322)
T ss_pred             chhhHHHHHHHHHHHHHHHHhcCcEEEEeccC-cccc
Confidence            9999999988777654    459999999999 4433

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.34  E-value=7.8e-13  Score=101.45  Aligned_cols=205  Identities=22%  Similarity=0.296  Sum_probs=145.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC--CCeEEEEcCCCChhhHHHHhcC---CCEEEEecccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSLVDACFG---CHVIFHTAALV   76 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~v~~~~~Dl~d~~~~~~~~~~---~d~vih~a~~~   76 (334)
                      .|++||+.-.||+.+++.|++.|.+|+++.|.+.+...+-..  ..+..+.+|+.+-+.+.+.+..   .|.++|+||..
T Consensus         9 ~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVNNAgvA   88 (245)
T KOG1207|consen    9 IVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVNNAGVA   88 (245)
T ss_pred             EEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhhccchhh
Confidence            489999999999999999999999999999998765432111  2488899999998888888865   79999999972


Q ss_pred             --CC----CCCCcccchhhhhHHHHHHHHHHHhc----CCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHH
Q 019878           77 --EP----WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (334)
Q Consensus        77 --~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK  146 (334)
                        .+    ..++.+..|++|+.+..++.+..++.    ..-..+|.+||.+...+..+              ++.|+.+|
T Consensus        89 ~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~n--------------HtvYcatK  154 (245)
T KOG1207|consen   89 TNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDN--------------HTVYCATK  154 (245)
T ss_pred             hcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCC--------------ceEEeecH
Confidence              22    33467788999999999999885554    11235999999766544332              36799999


Q ss_pred             HHHHHHHHHH----hhcCCCEEEEecCceecCC---CCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHH
Q 019878          147 AVADKIALQA----ASEGLPIVPVYPGVIYGPG---KLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHI  219 (334)
Q Consensus       147 ~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  219 (334)
                      .+.+++-+.+    ..+.+++..+.|..|....   .|+....-..++.+     .        ...-|.-++.++.|+.
T Consensus       155 aALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~r-----i--------Pl~rFaEV~eVVnA~l  221 (245)
T KOG1207|consen  155 AALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDR-----I--------PLKRFAEVDEVVNAVL  221 (245)
T ss_pred             HHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhh-----C--------chhhhhHHHHHHhhhe
Confidence            9888876654    3457899999999887542   22211111111111     1        1224777999999999


Q ss_pred             HHhhcCC---CCCeEEe
Q 019878          220 AAMEKGR---SGERYLL  233 (334)
Q Consensus       220 ~~~~~~~---~g~~~~i  233 (334)
                      .++....   .|...-+
T Consensus       222 fLLSd~ssmttGstlpv  238 (245)
T KOG1207|consen  222 FLLSDNSSMTTGSTLPV  238 (245)
T ss_pred             eeeecCcCcccCceeee
Confidence            8887643   3545444

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.33  E-value=3.2e-11  Score=103.31  Aligned_cols=158  Identities=26%  Similarity=0.293  Sum_probs=114.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC--CC----CCCC--CCeEEEEcCCCC-hhhHHHHhc-------
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI--SG----LPSE--GALELVYGDVTD-YRSLVDACF-------   64 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~----~~~~--~~v~~~~~Dl~d-~~~~~~~~~-------   64 (334)
                      |++|||||++.||.++++.|+++|++|+++.|.....  +.    ....  ..+.+..+|+++ .+++..+++       
T Consensus         6 ~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~~g   85 (251)
T COG1028           6 KVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEEFG   85 (251)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            3599999999999999999999999989888875531  10    1100  157778899998 777665553       


Q ss_pred             CCCEEEEeccccC---C----CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCcccccc
Q 019878           65 GCHVIFHTAALVE---P----WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        65 ~~d~vih~a~~~~---~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~  137 (334)
                      .+|++||+||...   .    ..++.+..+.+|+.+...+.+.+.....-+++|++||.... .....            
T Consensus        86 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~~------------  152 (251)
T COG1028          86 RIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPPG------------  152 (251)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCCC------------
Confidence            3899999999743   1    12345678899999999988855544211289999997665 33321            


Q ss_pred             ccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCcee
Q 019878          138 FCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIY  172 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~  172 (334)
                       ...|+.||++.+.+.+.+.    ++|+.+..+-||.+-
T Consensus       153 -~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~  190 (251)
T COG1028         153 -QAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYID  190 (251)
T ss_pred             -cchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCC
Confidence             1569999998877666544    458999999999554

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.30  E-value=7.2e-12  Score=96.04  Aligned_cols=208  Identities=25%  Similarity=0.263  Sum_probs=146.7

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC--CCeEEEEcCCCChhhHHHHhc-------CCCEEEEec
Q 019878            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (334)
Q Consensus         3 ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~a   73 (334)
                      .|||||.+.+|...++.|..+|..|.+++...++.......  +++.|.++|+++..++..++.       ..|+.+|||
T Consensus        12 alvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~~vnca   91 (260)
T KOG1199|consen   12 ALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDALVNCA   91 (260)
T ss_pred             EEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceeeeeecc
Confidence            68999999999999999999999999999987765432211  478999999999998887774       379999999


Q ss_pred             cccCC------------CCCCcccchhhhhHHHHHHHHHHHhcC-------CCcE--EEEecccceeccCCCccCCCCCc
Q 019878           74 ALVEP------------WLPDPSRFFAVNVEGLKNVVQAAKETK-------TVEK--IIYTSSFFALGSTDGYIADENQV  132 (334)
Q Consensus        74 ~~~~~------------~~~~~~~~~~~n~~~~~~l~~~~~~~~-------~~~~--~v~~Ss~~v~~~~~~~~~~e~~~  132 (334)
                      |....            ..++.....++|+.|+.|+++......       +.+|  +|.+-|...|....+.       
T Consensus        92 gia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gq-------  164 (260)
T KOG1199|consen   92 GIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQ-------  164 (260)
T ss_pred             ceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccch-------
Confidence            97211            123456678999999999988765442       1234  5666666666544332       


Q ss_pred             cccccccChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceee
Q 019878          133 HEEKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSF  208 (334)
Q Consensus       133 ~~~~~~~~~Y~~sK~----~~E~~~~~~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (334)
                             ..|+.||.    +.--+.+++...|++++.+-|+.+-.|    ....++..+..++....|...       -.
T Consensus       165 -------aaysaskgaivgmtlpiardla~~gir~~tiapglf~tp----llsslpekv~~fla~~ipfps-------rl  226 (260)
T KOG1199|consen  165 -------AAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTP----LLSSLPEKVKSFLAQLIPFPS-------RL  226 (260)
T ss_pred             -------hhhhcccCceEeeechhhhhcccCceEEEeecccccCCh----hhhhhhHHHHHHHHHhCCCch-------hc
Confidence                   56888887    334466677777999999999866444    334455555666555444221       13


Q ss_pred             eeHHHHHHHHHHHhhcCC-CCCeEEecC
Q 019878          209 CHVDDVVDGHIAAMEKGR-SGERYLLTG  235 (334)
Q Consensus       209 i~v~D~a~a~~~~~~~~~-~g~~~~i~g  235 (334)
                      -|....+..+-.+++++. .|++.-+.|
T Consensus       227 g~p~eyahlvqaiienp~lngevir~dg  254 (260)
T KOG1199|consen  227 GHPHEYAHLVQAIIENPYLNGEVIRFDG  254 (260)
T ss_pred             CChHHHHHHHHHHHhCcccCCeEEEecc
Confidence            356777778888888885 677776654

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.29  E-value=5.8e-10  Score=97.52  Aligned_cols=211  Identities=11%  Similarity=0.084  Sum_probs=126.6

Q ss_pred             cEEEEcCC--ChhhHHHHHHHHhCCCeEEEEEcCC---------CCCC--CC---CCC---------------CCeEEEE
Q 019878            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRT---------SDIS--GL---PSE---------------GALELVY   50 (334)
Q Consensus         2 ~ilItG~t--G~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~--~~---~~~---------------~~v~~~~   50 (334)
                      ++||||++  ..||+++++.|+++|++|++.++.+         ....  ..   ...               ...+-+.
T Consensus        10 ~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~v~   89 (299)
T PRK06300         10 IAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTPEDVP   89 (299)
T ss_pred             EEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCCEEee
Confidence            48999995  8999999999999999999976431         0000  00   000               0111222


Q ss_pred             cCCCCh--------hhHHHHh-------cCCCEEEEeccccC----C----CCCCcccchhhhhHHHHHHHHHHHhcCC-
Q 019878           51 GDVTDY--------RSLVDAC-------FGCHVIFHTAALVE----P----WLPDPSRFFAVNVEGLKNVVQAAKETKT-  106 (334)
Q Consensus        51 ~Dl~d~--------~~~~~~~-------~~~d~vih~a~~~~----~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~-  106 (334)
                      .|+++.        +++.+++       .++|++||+||...    +    ..+++...+++|+.++.++++++..... 
T Consensus        90 ~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~  169 (299)
T PRK06300         90 EEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNP  169 (299)
T ss_pred             cccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc
Confidence            222221        1233332       34899999997521    1    1224566889999999999999987631 


Q ss_pred             CcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHh----h-cCCCEEEEecCceecCCCCCchh
Q 019878          107 VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA----S-EGLPIVPVYPGVIYGPGKLTTGN  181 (334)
Q Consensus       107 ~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~-~g~~~~ilR~~~v~G~~~~~~~~  181 (334)
                      -.++|++||.......+..             ...|+.+|.+.+.+.+.+.    + +|+++..+.||.+-.+...... 
T Consensus       170 ~G~ii~iss~~~~~~~p~~-------------~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~-  235 (299)
T PRK06300        170 GGSTISLTYLASMRAVPGY-------------GGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIG-  235 (299)
T ss_pred             CCeEEEEeehhhcCcCCCc-------------cHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhccc-
Confidence            2478888875443221110             1259999998887776543    3 4899999999988665321000 


Q ss_pred             HHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          182 LVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      ....... ......+        ...+...+|+++++..++...   ..|+++.+.|
T Consensus       236 ~~~~~~~-~~~~~~p--------~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdG  283 (299)
T PRK06300        236 FIERMVD-YYQDWAP--------LPEPMEAEQVGAAAAFLVSPLASAITGETLYVDH  283 (299)
T ss_pred             ccHHHHH-HHHhcCC--------CCCCcCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence            0011111 1111111        112456899999999988643   3577777754

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.24  E-value=3.8e-10  Score=90.83  Aligned_cols=199  Identities=21%  Similarity=0.219  Sum_probs=133.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhC-CCeEEEEEcC-CCCC-CCC----CCCCCeEEEEcCCCChhhHHHHhc---------C
Q 019878            2 KILVSGASGYLGGRLCHALLKQ-GHSVRALVRR-TSDI-SGL----PSEGALELVYGDVTDYRSLVDACF---------G   65 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~-g~~V~~~~r~-~~~~-~~~----~~~~~v~~~~~Dl~d~~~~~~~~~---------~   65 (334)
                      .|+||||+-.||-.|+++|++. |.++++..++ +++. .++    ...++++.++.|+++.+++.+...         +
T Consensus         5 sv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~G   84 (249)
T KOG1611|consen    5 SVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSDG   84 (249)
T ss_pred             cEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcccCC
Confidence            4999999999999999999974 6666555554 5542 112    124689999999999888776653         4


Q ss_pred             CCEEEEeccccCC----CCCC---cccchhhhhHHHHHHHHHHHhcC---C-----------CcEEEEecccceeccCCC
Q 019878           66 CHVIFHTAALVEP----WLPD---PSRFFAVNVEGLKNVVQAAKETK---T-----------VEKIIYTSSFFALGSTDG  124 (334)
Q Consensus        66 ~d~vih~a~~~~~----~~~~---~~~~~~~n~~~~~~l~~~~~~~~---~-----------~~~~v~~Ss~~v~~~~~~  124 (334)
                      .+++|++||....    .+.+   ....+++|..++..+.+++...-   .           ...+|++||.+.-  ..+
T Consensus        85 lnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s--~~~  162 (249)
T KOG1611|consen   85 LNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGS--IGG  162 (249)
T ss_pred             ceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccc--cCC
Confidence            7999999998332    1111   34577999999988887764330   1           1258888886433  111


Q ss_pred             ccCCCCCccccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCcccc
Q 019878          125 YIADENQVHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIG  200 (334)
Q Consensus       125 ~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (334)
                      .      ..   .+...|..||.+.-...+...    ++++-++.+.||+|--....                       
T Consensus       163 ~------~~---~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg-----------------------  210 (249)
T KOG1611|consen  163 F------RP---GGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGG-----------------------  210 (249)
T ss_pred             C------CC---cchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCC-----------------------
Confidence            0      00   114789999998887777643    45788999999999654210                       


Q ss_pred             CCCCceeeeeHHHHHHHHHHHhhc---CCCCCeEEecCCCC
Q 019878          201 YGNDRFSFCHVDDVVDGHIAAMEK---GRSGERYLLTGENA  238 (334)
Q Consensus       201 ~~~~~~~~i~v~D~a~a~~~~~~~---~~~g~~~~i~g~~~  238 (334)
                          .-.-+.+++-+.-+...+.+   ...|..||-.+.++
T Consensus       211 ----~~a~ltveeSts~l~~~i~kL~~~hnG~ffn~dlt~i  247 (249)
T KOG1611|consen  211 ----KKAALTVEESTSKLLASINKLKNEHNGGFFNRDGTPI  247 (249)
T ss_pred             ----CCcccchhhhHHHHHHHHHhcCcccCcceEccCCCcC
Confidence                11345577777777777654   34688888765443

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.24  E-value=6.3e-11  Score=127.04  Aligned_cols=158  Identities=20%  Similarity=0.196  Sum_probs=120.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhC-CCeEEEEEcCCCCCC------------------------------------------
Q 019878            2 KILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDIS------------------------------------------   38 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~------------------------------------------   38 (334)
                      ++|||||++.||..++++|+++ |.+|++++|++....                                          
T Consensus      1999 vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~~~~ 2078 (2582)
T TIGR02813      1999 VFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRPVLS 2078 (2582)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccccch
Confidence            5899999999999999999988 699999999831000                                          


Q ss_pred             ---------CCCC-CCCeEEEEcCCCChhhHHHHhc------CCCEEEEeccccCC------CCCCcccchhhhhHHHHH
Q 019878           39 ---------GLPS-EGALELVYGDVTDYRSLVDACF------GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKN   96 (334)
Q Consensus        39 ---------~~~~-~~~v~~~~~Dl~d~~~~~~~~~------~~d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~   96 (334)
                               .+.. ...+.++.+|++|.+++.++++      .+|.|||+||....      ..+++...+++|+.|+.+
T Consensus      2079 ~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~ 2158 (2582)
T TIGR02813      2079 SLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLS 2158 (2582)
T ss_pred             hHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHH
Confidence                     0000 0257899999999998877764      37999999997322      223456689999999999


Q ss_pred             HHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHhhc--CCCEEEEecCceecC
Q 019878           97 VVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE--GLPIVPVYPGVIYGP  174 (334)
Q Consensus        97 l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~--g~~~~ilR~~~v~G~  174 (334)
                      +++++... ..+++|++||...+-...+              .+.|+.+|...+.+...+...  ++++..+.+|.+-|.
T Consensus      2159 Ll~al~~~-~~~~IV~~SSvag~~G~~g--------------qs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtg 2223 (2582)
T TIGR02813      2159 LLAALNAE-NIKLLALFSSAAGFYGNTG--------------QSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGG 2223 (2582)
T ss_pred             HHHHHHHh-CCCeEEEEechhhcCCCCC--------------cHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCC
Confidence            99999876 4678999999765432222              256999999888877776642  688899999987664

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.14  E-value=1.3e-10  Score=93.29  Aligned_cols=96  Identities=17%  Similarity=0.169  Sum_probs=74.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CCCCCCeEEEEcCCCChhhHHHHhcC-------CCEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACFG-------CHVI   69 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~~-------~d~v   69 (334)
                      |+++|||||||+|. +++.|.++|++|++++|+++....    +.....+.++.+|+.|.+++.+++++       +|.+
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l   79 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA   79 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence            89999999998876 999999999999999998654322    11223688899999999998887753       4555


Q ss_pred             EEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCc----EEEEec
Q 019878           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVE----KIIYTS  114 (334)
Q Consensus        70 ih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~v~~S  114 (334)
                      |+.+                .+.++.++..+|++. +++    +|+|+=
T Consensus        80 v~~v----------------h~~~~~~~~~~~~~~-gv~~~~~~~~h~~  111 (177)
T PRK08309         80 VAWI----------------HSSAKDALSVVCREL-DGSSETYRLFHVL  111 (177)
T ss_pred             EEec----------------cccchhhHHHHHHHH-ccCCCCceEEEEe
Confidence            5443                444678999999998 688    888865

>PTZ00325 malate dehydrogenase; Provisional

Probab=99.12  E-value=3.9e-10  Score=98.76  Aligned_cols=168  Identities=14%  Similarity=0.020  Sum_probs=111.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCCCCCCC-CCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLPSE-GALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~-~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~   78 (334)
                      ||+|+|++|.||+.++..|..++  .+++.+++.......+.-. ........+.+|+.++.+.++++|+||++||....
T Consensus        10 KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVitaG~~~~   89 (321)
T PTZ00325         10 KVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLICAGVPRK   89 (321)
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEECCCCCCC
Confidence            69999999999999999998654  7899999943322211100 01122334566666667889999999999998544


Q ss_pred             CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCcc--CCCCCccccccccChHHHHHHHHHHHHHHH
Q 019878           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYI--ADENQVHEEKYFCTQYERSKAVADKIALQA  156 (334)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~--~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~  156 (334)
                      ........+..|+..+.+++++++++ +.+++|+++|.-+-....-..  ..+....++   ...||.+-+-.-++-...
T Consensus        90 ~~~tR~dll~~N~~i~~~i~~~i~~~-~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~---~~viG~g~LDs~R~r~~l  165 (321)
T PTZ00325         90 PGMTRDDLFNTNAPIVRDLVAAVASS-APKAIVGIVSNPVNSTVPIAAETLKKAGVYDP---RKLFGVTTLDVVRARKFV  165 (321)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecCcHHHHHHHHHhhhhhccCCCh---hheeechhHHHHHHHHHH
Confidence            33445678999999999999999999 789999999976654332111  011222222   356777633333333333


Q ss_pred             hh-cCCCEEEEecCceecC
Q 019878          157 AS-EGLPIVPVYPGVIYGP  174 (334)
Q Consensus       157 ~~-~g~~~~ilR~~~v~G~  174 (334)
                      ++ .++....++ +.|+|.
T Consensus       166 a~~l~v~~~~V~-~~VlGe  183 (321)
T PTZ00325        166 AEALGMNPYDVN-VPVVGG  183 (321)
T ss_pred             HHHhCcChhheE-EEEEee
Confidence            33 477777777 778886

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.10  E-value=3.4e-10  Score=95.73  Aligned_cols=159  Identities=19%  Similarity=0.237  Sum_probs=115.7

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC------CCeEEEEcCCCChhh----HHHHhcC--CCEEE
Q 019878            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE------GALELVYGDVTDYRS----LVDACFG--CHVIF   70 (334)
Q Consensus         3 ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~v~~~~~Dl~d~~~----~~~~~~~--~d~vi   70 (334)
                      ..|||||..||++.+++|+++|.+|++++|+.++.+.+...      -.+.++..|.++.+.    +.+.+++  +.++|
T Consensus        52 AVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgILV  131 (312)
T KOG1014|consen   52 AVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGILV  131 (312)
T ss_pred             EEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceEEEE
Confidence            57999999999999999999999999999998876533221      247888899987664    5555555  67999


Q ss_pred             EeccccCCC--------CCCcccchhhhhHHHHHHHHHHHhcC---CCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           71 HTAALVEPW--------LPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        71 h~a~~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      |++|.....        .......+.+|+.++..+.+......   +-.-+|++||.+.--+.+.              .
T Consensus       132 NNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~--------------~  197 (312)
T KOG1014|consen  132 NNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPL--------------L  197 (312)
T ss_pred             ecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChh--------------H
Confidence            999985421        11234577899999888777776652   2346999998644333221              4


Q ss_pred             ChHHHHHHHHHHHHH----HHhhcCCCEEEEecCceecCC
Q 019878          140 TQYERSKAVADKIAL----QAASEGLPIVPVYPGVIYGPG  175 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~----~~~~~g~~~~ilR~~~v~G~~  175 (334)
                      +.|+.+|...+.+-.    ++..+|+.+-.+-|..|-++.
T Consensus       198 s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm  237 (312)
T KOG1014|consen  198 SVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKM  237 (312)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccc
Confidence            779999996665444    444568999999999888764

>PRK06720 hypothetical protein; Provisional

Probab=99.01  E-value=1.7e-09  Score=86.31  Aligned_cols=117  Identities=12%  Similarity=0.041  Sum_probs=77.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CCC-CCCeEEEEcCCCChhhHHHHh-------cCCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPS-EGALELVYGDVTDYRSLVDAC-------FGCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~-~~~v~~~~~Dl~d~~~~~~~~-------~~~d~v   69 (334)
                      +++||||+|.||.++++.|.+.|++|++++|+.+....    +.. ...+.++.+|+++.+++.+++       .++|++
T Consensus        18 ~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~iDil   97 (169)
T PRK06720         18 VAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRIDML   97 (169)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            48999999999999999999999999999987653211    111 124678899999998877654       248999


Q ss_pred             EEeccccCC----CCCCcccchhhhhHHHHHHHHHHHhc----------CCCcEEEEecccce
Q 019878           70 FHTAALVEP----WLPDPSRFFAVNVEGLKNVVQAAKET----------KTVEKIIYTSSFFA  118 (334)
Q Consensus        70 ih~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~~~v~~Ss~~v  118 (334)
                      ||+||....    +....+.....|+.++......+...          ....||-.+||.+.
T Consensus        98 VnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (169)
T PRK06720         98 FQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQ  160 (169)
T ss_pred             EECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccc
Confidence            999997331    11111122245555444444443332          13457777777543

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=99.01  E-value=2.5e-09  Score=94.43  Aligned_cols=115  Identities=16%  Similarity=0.129  Sum_probs=82.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC-------CeEEEEEcCCCC--CCCCCC--CCCeEEEEcCCCChhhHHHHhcCCCEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG-------HSVRALVRRTSD--ISGLPS--EGALELVYGDVTDYRSLVDACFGCHVI   69 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g-------~~V~~~~r~~~~--~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~~~d~v   69 (334)
                      +||+|||++|+||++++..|..++       .+++++++++..  ......  .+.......|+.....+.+.++++|+|
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aDiV   82 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVDVA   82 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHhCCCCEE
Confidence            489999999999999999999744       589999996532  111100  000112233554456677888999999


Q ss_pred             EEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecc
Q 019878           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSS  115 (334)
Q Consensus        70 ih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss  115 (334)
                      ||+||.......+....++.|+...+.+.+...++. .-..+|.+|.
T Consensus        83 I~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          83 ILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             EEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecC
Confidence            999998665445567889999999999999998883 2345666664

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN00106 malate dehydrogenase

Probab=98.99  E-value=1.4e-09  Score=95.45  Aligned_cols=169  Identities=14%  Similarity=0.063  Sum_probs=112.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCCCCCCCC-CeEEEEcCCCChhhHHHHhcCCCEEEEeccccC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLPSEG-ALELVYGDVTDYRSLVDACFGCHVIFHTAALVE   77 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~-~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~   77 (334)
                      .||+|+|++|.||+.++..|..++  .++.++++.+.....+.-.. .......++.+.+++.+.++++|+|||+||...
T Consensus        19 ~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~~~   98 (323)
T PLN00106         19 FKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGVPR   98 (323)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCCCCC
Confidence            379999999999999999999765  58999998773221111000 111122344445567889999999999999865


Q ss_pred             CCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCC--CccCCCCCccccccccChHHHHHHHHHHHHHH
Q 019878           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD--GYIADENQVHEEKYFCTQYERSKAVADKIALQ  155 (334)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~--~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~  155 (334)
                      .........+..|...++++++.+.++ +...+|+++|-=+-+...  ..........+   +...||.++...+++-..
T Consensus        99 ~~g~~R~dll~~N~~i~~~i~~~i~~~-~p~aivivvSNPvD~~~~i~t~~~~~~s~~p---~~~viG~~~LDs~Rl~~~  174 (323)
T PLN00106         99 KPGMTRDDLFNINAGIVKTLCEAVAKH-CPNALVNIISNPVNSTVPIAAEVLKKAGVYD---PKKLFGVTTLDVVRANTF  174 (323)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeCCCccccHHHHHHHHHHcCCCC---cceEEEEecchHHHHHHH
Confidence            444556778999999999999999999 577888888743321100  00001111122   236688888777777666


Q ss_pred             Hhh-cCCCEEEEecCceecC
Q 019878          156 AAS-EGLPIVPVYPGVIYGP  174 (334)
Q Consensus       156 ~~~-~g~~~~ilR~~~v~G~  174 (334)
                      +++ .|++...++-. |+|.
T Consensus       175 lA~~lgv~~~~V~~~-ViGe  193 (323)
T PLN00106        175 VAEKKGLDPADVDVP-VVGG  193 (323)
T ss_pred             HHHHhCCChhheEEE-EEEe
Confidence            664 58888777544 5554

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.89  E-value=4e-09  Score=93.68  Aligned_cols=95  Identities=27%  Similarity=0.331  Sum_probs=77.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCC--CCeEEEEcCCCChhhHHHHhcCCCEEEEeccccC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSLVDACFGCHVIFHTAALVE   77 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~--~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~   77 (334)
                      |+|||.|+ |+||+.+++.|+++| .+|++.+|+.++...+...  ++++....|..|.+++.+++++.|+|||++....
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~   80 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPFV   80 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCchh
Confidence            68999997 999999999999998 8999999997765544332  3799999999999999999999999999997421


Q ss_pred             CCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                                      ..+++++|.+. ++ .+|=+|
T Consensus        81 ----------------~~~i~ka~i~~-gv-~yvDts   99 (389)
T COG1748          81 ----------------DLTILKACIKT-GV-DYVDTS   99 (389)
T ss_pred             ----------------hHHHHHHHHHh-CC-CEEEcc
Confidence                            13778888887 32 565555

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.86  E-value=1.3e-08  Score=85.37  Aligned_cols=75  Identities=24%  Similarity=0.385  Sum_probs=54.9

Q ss_pred             CcEEEEcC----------------CChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCC--hhhHHHH
Q 019878            1 MKILVSGA----------------SGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTD--YRSLVDA   62 (334)
Q Consensus         1 m~ilItG~----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d--~~~~~~~   62 (334)
                      |+||||+|                |||+|.+|++.|+++|++|++++|.......  ...+++++.++-.+  .+.+.+.
T Consensus         1 ~~vliT~G~T~e~iD~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~~--~~~~v~~i~v~s~~~m~~~l~~~   78 (229)
T PRK06732          1 MKILITSGGTTEPIDSVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKPE--PHPNLSIIEIENVDDLLETLEPL   78 (229)
T ss_pred             CEEEEcCCCcccccCCceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccCC--CCCCeEEEEEecHHHHHHHHHHH
Confidence            88888865                8999999999999999999999876432211  11257777654322  2445566


Q ss_pred             hcCCCEEEEeccccC
Q 019878           63 CFGCHVIFHTAALVE   77 (334)
Q Consensus        63 ~~~~d~vih~a~~~~   77 (334)
                      +.++|+|||+||...
T Consensus        79 ~~~~DivIh~AAvsd   93 (229)
T PRK06732         79 VKDHDVLIHSMAVSD   93 (229)
T ss_pred             hcCCCEEEeCCccCC
Confidence            678999999999754

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.81  E-value=1.1e-08  Score=82.54  Aligned_cols=197  Identities=19%  Similarity=0.193  Sum_probs=122.7

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEE--EcCCCCCCCCCCC--CCeEEEEcCCCChhhHHHHhc-------CCCEEEE
Q 019878            3 ILVSGASGYLGGRLCHALLKQGHSVRAL--VRRTSDISGLPSE--GALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (334)
Q Consensus         3 ilItG~tG~iG~~l~~~L~~~g~~V~~~--~r~~~~~~~~~~~--~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih   71 (334)
                      ||+||++-.||..++..+.+.+.+....  .|.......+...  +...+..+|+++...+....+       +-|.|||
T Consensus         9 illTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr~iiI~   88 (253)
T KOG1204|consen    9 ILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGKRDIIIH   88 (253)
T ss_pred             EEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCceeEEEe
Confidence            8999999999999999998877554433  3433322211100  122333445544433332221       3799999


Q ss_pred             eccccCC---------CCCCcccchhhhhHHHHHHHHHHHhcC-C---CcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           72 TAALVEP---------WLPDPSRFFAVNVEGLKNVVQAAKETK-T---VEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        72 ~a~~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~---~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      +||...+         ...++..+++.|+.++..|...+.+.. +   .+-+|++||.+...+...              
T Consensus        89 NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~--------------  154 (253)
T KOG1204|consen   89 NAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSS--------------  154 (253)
T ss_pred             cCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccH--------------
Confidence            9997432         122456799999999998888776652 1   256999999876655442              


Q ss_pred             cChHHHHHHHHHHHHHHHh--hc-CCCEEEEecCceecCCCC-----C-chhHHHHHHHHHHcCCCCccccCCCCceeee
Q 019878          139 CTQYERSKAVADKIALQAA--SE-GLPIVPVYPGVIYGPGKL-----T-TGNLVAKLMIERFNGRLPGYIGYGNDRFSFC  209 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~--~~-g~~~~ilR~~~v~G~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  209 (334)
                      +..|+.+|++-+++.+..+  ++ ++.+...+||.+=.+...     . ...-...++....+            .-+.+
T Consensus       155 wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~------------~~~ll  222 (253)
T KOG1204|consen  155 WAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKE------------SGQLL  222 (253)
T ss_pred             HHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHh------------cCCcC
Confidence            4679999999999999876  23 788888999977543210     0 11111122222211            12355


Q ss_pred             eHHHHHHHHHHHhhcC
Q 019878          210 HVDDVVDGHIAAMEKG  225 (334)
Q Consensus       210 ~v~D~a~a~~~~~~~~  225 (334)
                      ...+-++.+..++++.
T Consensus       223 ~~~~~a~~l~~L~e~~  238 (253)
T KOG1204|consen  223 DPQVTAKVLAKLLEKG  238 (253)
T ss_pred             ChhhHHHHHHHHHHhc
Confidence            6777888888777764

>PRK09620 hypothetical protein; Provisional

Probab=98.80  E-value=1.6e-08  Score=84.51  Aligned_cols=77  Identities=16%  Similarity=0.189  Sum_probs=55.1

Q ss_pred             CcEEEEcCC----------------ChhhHHHHHHHHhCCCeEEEEEcCCCC-CCCCCCCCCeEEEEcCCCChhhHHHHh
Q 019878            1 MKILVSGAS----------------GYLGGRLCHALLKQGHSVRALVRRTSD-ISGLPSEGALELVYGDVTDYRSLVDAC   63 (334)
Q Consensus         1 m~ilItG~t----------------G~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~   63 (334)
                      |+||||+|.                ||+|++|+++|+++|++|+++++.... .........+..+.+|....+.+.+++
T Consensus         4 k~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~~~~   83 (229)
T PRK09620          4 KKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMKSII   83 (229)
T ss_pred             CEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHHHHh
Confidence            579999886                999999999999999999999864321 111111113445666444446777777


Q ss_pred             c--CCCEEEEeccccC
Q 019878           64 F--GCHVIFHTAALVE   77 (334)
Q Consensus        64 ~--~~d~vih~a~~~~   77 (334)
                      .  ++|+|||+||..+
T Consensus        84 ~~~~~D~VIH~AAvsD   99 (229)
T PRK09620         84 THEKVDAVIMAAAGSD   99 (229)
T ss_pred             cccCCCEEEECccccc
Confidence            4  5999999999844

>PRK05086 malate dehydrogenase; Provisional

Probab=98.73  E-value=9.8e-08  Score=83.90  Aligned_cols=112  Identities=23%  Similarity=0.189  Sum_probs=79.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHh---CCCeEEEEEcCCCCC---CCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLK---QGHSVRALVRRTSDI---SGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~---~g~~V~~~~r~~~~~---~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |||+|.||+|.+|++++..|..   .++++.+++|++...   -++...+....+.+  .+.+++.+.++++|+||.++|
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~--~~~~d~~~~l~~~DiVIitaG   78 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG--FSGEDPTPALEGADVVLISAG   78 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEE--eCCCCHHHHcCCCCEEEEcCC
Confidence            8999999999999999998854   346788888875421   01111011112222  223445667788999999999


Q ss_pred             ccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecc
Q 019878           75 LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (334)
Q Consensus        75 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss  115 (334)
                      ............+..|...+.++++++.++ +.+++|.+.|
T Consensus        79 ~~~~~~~~R~dll~~N~~i~~~ii~~i~~~-~~~~ivivvs  118 (312)
T PRK05086         79 VARKPGMDRSDLFNVNAGIVKNLVEKVAKT-CPKACIGIIT  118 (312)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEcc
Confidence            855443456678899999999999999998 6777777776

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.71  E-value=1.3e-07  Score=83.22  Aligned_cols=170  Identities=13%  Similarity=0.063  Sum_probs=110.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC-------eEEEEEcCCCC--CCC--CCCCCCeEEEEcCCCChhhHHHHhcCCCEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH-------SVRALVRRTSD--ISG--LPSEGALELVYGDVTDYRSLVDACFGCHVI   69 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~--~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   69 (334)
                      +||.|+|++|.+|+.++..|..+|.       +++.+++.+..  ...  +.-......+..+..-.....+.++++|+|
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daDiv   82 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDDPNVAFKDADWA   82 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEecCcHHHhCCCCEE
Confidence            5899999999999999999998773       78999885432  211  100000000000100001235677899999


Q ss_pred             EEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHH
Q 019878           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAV  148 (334)
Q Consensus        70 ih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~  148 (334)
                      |.+||............+..|+...+.+.+...++.. -..+|.+|...-.- + ..........+   +...||.+++.
T Consensus        83 vitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~-t-~~~~k~sg~~p---~~~ViG~t~LD  157 (322)
T cd01338          83 LLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTN-A-LIAMKNAPDIP---PDNFTAMTRLD  157 (322)
T ss_pred             EEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHH-H-HHHHHHcCCCC---hHheEEehHHH
Confidence            9999985544445667899999999999999999852 44677776311000 0 00001110011   13678889999


Q ss_pred             HHHHHHHHhh-cCCCEEEEecCceecCC
Q 019878          149 ADKIALQAAS-EGLPIVPVYPGVIYGPG  175 (334)
Q Consensus       149 ~E~~~~~~~~-~g~~~~ilR~~~v~G~~  175 (334)
                      .+++...+++ .|++...+|...|||+.
T Consensus       158 s~Rl~~~la~~lgv~~~~v~~~~V~GeH  185 (322)
T cd01338         158 HNRAKSQLAKKAGVPVTDVKNMVIWGNH  185 (322)
T ss_pred             HHHHHHHHHHHhCcChhHeEEEEEEeCC
Confidence            9998888875 59999999999999985

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd00704 MDH Malate dehydrogenase

Probab=98.66  E-value=2.1e-07  Score=82.06  Aligned_cols=107  Identities=18%  Similarity=0.161  Sum_probs=80.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC-------CeEEEEEcCCCCCCCCCCCCCeEEEEcCCCCh-----------hhHHHH
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG-------HSVRALVRRTSDISGLPSEGALELVYGDVTDY-----------RSLVDA   62 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~-----------~~~~~~   62 (334)
                      .||.|+|++|.+|+.++..|..+|       ++++.+++++.. +      ..+....|+.|.           ....+.
T Consensus         1 ~KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~-~------~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~   73 (323)
T cd00704           1 LHVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM-K------ALEGVVMELQDCAFPLLKGVVITTDPEEA   73 (323)
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc-C------ccceeeeehhhhcccccCCcEEecChHHH
Confidence            379999999999999999998765       258999987621 1      123334455544           345678


Q ss_pred             hcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEec
Q 019878           63 CFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTS  114 (334)
Q Consensus        63 ~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~S  114 (334)
                      ++++|+|||+||............+..|....+.+.....++. .-..+|.+|
T Consensus        74 ~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          74 FKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             hCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            8999999999998655445566788999999999999999983 344566666

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.65  E-value=2.9e-07  Score=78.13  Aligned_cols=96  Identities=15%  Similarity=0.150  Sum_probs=73.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcC--CCEEEEeccccCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAALVEP   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vih~a~~~~~   78 (334)
                      |+|||+||||. |+.|++.|.+.|++|++..++......+...+ ...+..+..|.+++.+.+.+  +|+||+++..   
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g-~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHP---   75 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQ-ALTVHTGALDPQELREFLKRHSIDILVDATHP---   75 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccccC-CceEEECCCCHHHHHHHHHhcCCCEEEEcCCH---
Confidence            89999999999 99999999999999999999987655554432 33455667788888888754  9999999853   


Q ss_pred             CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEE
Q 019878           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY  112 (334)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~  112 (334)
                                --...+.+..++|++. +++.+=|
T Consensus        76 ----------fA~~is~~a~~a~~~~-~ipylR~   98 (256)
T TIGR00715        76 ----------FAAQITTNATAVCKEL-GIPYVRF   98 (256)
T ss_pred             ----------HHHHHHHHHHHHHHHh-CCcEEEE
Confidence                      1224567999999998 5654433

This enzyme was found to be a monomer by gel filtration.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.56  E-value=6.9e-07  Score=78.85  Aligned_cols=107  Identities=18%  Similarity=0.132  Sum_probs=79.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-------eEEEEEcCCCCCCCCCCCCCeEEEEcCCCChh-----------hHHHHh
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-------SVRALVRRTSDISGLPSEGALELVYGDVTDYR-----------SLVDAC   63 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~-----------~~~~~~   63 (334)
                      ||.|+|++|.+|++++..|..++.       +++.+++.+...       ..+-...|+.|..           ...+.+
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-------~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~   73 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-------VLEGVVMELMDCAFPLLDGVVPTHDPAVAF   73 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-------ccceeEeehhcccchhcCceeccCChHHHh
Confidence            689999999999999999987542       588999865431       1222334555543           345778


Q ss_pred             cCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecc
Q 019878           64 FGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSS  115 (334)
Q Consensus        64 ~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss  115 (334)
                      +++|+|||+||............+..|+...+.+.+...++. .-..+|.+|.
T Consensus        74 ~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsN  126 (324)
T TIGR01758        74 TDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGN  126 (324)
T ss_pred             CCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCC
Confidence            899999999998554334467788999999999999999983 3456776663

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.55  E-value=1.1e-07  Score=86.70  Aligned_cols=93  Identities=31%  Similarity=0.373  Sum_probs=70.0

Q ss_pred             EEEEcCCChhhHHHHHHHHhCC-C-eEEEEEcCCCCCCCCC---CCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccC
Q 019878            3 ILVSGASGYLGGRLCHALLKQG-H-SVRALVRRTSDISGLP---SEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVE   77 (334)
Q Consensus         3 ilItG~tG~iG~~l~~~L~~~g-~-~V~~~~r~~~~~~~~~---~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~   77 (334)
                      |+|.|+ |++|+.+++.|.+++ . +|++.+|+..+...+.   ...+++++.+|+.|.+++.++++++|+||||++.. 
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~-   78 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPF-   78 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG-
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccc-
Confidence            799999 999999999999886 4 8999999987643322   22489999999999999999999999999999842 


Q ss_pred             CCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                                     ....++++|.+.+ + ++|-+|
T Consensus        79 ---------------~~~~v~~~~i~~g-~-~yvD~~   98 (386)
T PF03435_consen   79 ---------------FGEPVARACIEAG-V-HYVDTS   98 (386)
T ss_dssp             ---------------GHHHHHHHHHHHT---EEEESS
T ss_pred             ---------------hhHHHHHHHHHhC-C-Ceeccc
Confidence                           1247888888873 2 677644

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.36  E-value=2.8e-07  Score=71.25  Aligned_cols=107  Identities=19%  Similarity=0.258  Sum_probs=77.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCCCC---------CCCCCeEEEEcCCCChhhHHHHhcCCCEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGL---------PSEGALELVYGDVTDYRSLVDACFGCHVI   69 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~---------~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   69 (334)
                      |||.|+|++|.+|++++..|..++  .+++.+++.++.....         ..........+|       .+.++++|+|
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~-------~~~~~~aDiv   73 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGD-------YEALKDADIV   73 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESS-------GGGGTTESEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccccc-------ccccccccEE
Confidence            899999999999999999999876  6899999985432100         000012222222       3456789999


Q ss_pred             EEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        70 ih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      |-+||............++.|....+.+.+...++..-..++.+|
T Consensus        74 vitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt  118 (141)
T PF00056_consen   74 VITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT  118 (141)
T ss_dssp             EETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred             EEeccccccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence            999998554445566788999999999999999995444666665

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=98.34  E-value=1.4e-05  Score=71.06  Aligned_cols=74  Identities=16%  Similarity=0.075  Sum_probs=56.0

Q ss_pred             cEEEEcCCChhhHH--HHHHHHhCCCeEEEEEcCCCCCC----------------CCCCC-CCeEEEEcCCCChhhHHHH
Q 019878            2 KILVSGASGYLGGR--LCHALLKQGHSVRALVRRTSDIS----------------GLPSE-GALELVYGDVTDYRSLVDA   62 (334)
Q Consensus         2 ~ilItG~tG~iG~~--l~~~L~~~g~~V~~~~r~~~~~~----------------~~~~~-~~v~~~~~Dl~d~~~~~~~   62 (334)
                      ++||||+++.+|.+  +++.| +.|.+|+++++..+...                .+... ..+..+.+|+.+.+.+.++
T Consensus        43 ~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~~l  121 (398)
T PRK13656         43 KVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQKV  121 (398)
T ss_pred             EEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            69999999999999  89999 99999999885432111                01111 1356789999999887766


Q ss_pred             hc-------CCCEEEEecccc
Q 019878           63 CF-------GCHVIFHTAALV   76 (334)
Q Consensus        63 ~~-------~~d~vih~a~~~   76 (334)
                      ++       ++|++||++|..
T Consensus       122 ie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        122 IELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHhcCCCCEEEECCccC
Confidence            53       489999999974

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=98.32  E-value=8.9e-06  Score=67.00  Aligned_cols=167  Identities=22%  Similarity=0.258  Sum_probs=109.2

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCC-----eEEEEEcCCCCCCC--------CC-CCCCeEEEEcCCCChhhHHHHhc----
Q 019878            3 ILVSGASGYLGGRLCHALLKQGH-----SVRALVRRTSDISG--------LP-SEGALELVYGDVTDYRSLVDACF----   64 (334)
Q Consensus         3 ilItG~tG~iG~~l~~~L~~~g~-----~V~~~~r~~~~~~~--------~~-~~~~v~~~~~Dl~d~~~~~~~~~----   64 (334)
                      +||||+++.||-+++.+|++...     .+....|+-++.+.        .+ +.-.++++.+|+++..++.++..    
T Consensus         6 alITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di~~   85 (341)
T KOG1478|consen    6 ALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDIKQ   85 (341)
T ss_pred             EEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHHHHH
Confidence            89999999999999999997643     35566777655331        11 11368999999999887766653    


Q ss_pred             ---CCCEEEEeccccCCCC---------------------------------CCcccchhhhhHHHHHHHHHHHhc---C
Q 019878           65 ---GCHVIFHTAALVEPWL---------------------------------PDPSRFFAVNVEGLKNVVQAAKET---K  105 (334)
Q Consensus        65 ---~~d~vih~a~~~~~~~---------------------------------~~~~~~~~~n~~~~~~l~~~~~~~---~  105 (334)
                         ..|.|+-+||.+....                                 ..-...+++||-|-.-+++.....   +
T Consensus        86 rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll~~~  165 (341)
T KOG1478|consen   86 RFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLLCHS  165 (341)
T ss_pred             HhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHhhcC
Confidence               4799999998642110                                 122457899999988777766554   2


Q ss_pred             CCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHhh----cCCCEEEEecCceecC
Q 019878          106 TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS----EGLPIVPVYPGVIYGP  174 (334)
Q Consensus       106 ~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ilR~~~v~G~  174 (334)
                      ..+++|.+||...--..  ...++-....   ...+|..||.+.+.+-.+..+    .|+.--++.||.....
T Consensus       166 ~~~~lvwtSS~~a~kk~--lsleD~q~~k---g~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~  233 (341)
T KOG1478|consen  166 DNPQLVWTSSRMARKKN--LSLEDFQHSK---GKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTN  233 (341)
T ss_pred             CCCeEEEEeeccccccc--CCHHHHhhhc---CCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecc
Confidence            23489999986543221  1111111111   125699999999877665443    3666677777765543

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.29  E-value=6.9e-07  Score=73.36  Aligned_cols=75  Identities=20%  Similarity=0.195  Sum_probs=59.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC----CCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS----EGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      ++++|+||+|.+|+.+++.|.+.|++|++++|+.++...+..    ..+.+...+|..+.+++.+.+.++|+||++.+.
T Consensus        29 ~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at~~  107 (194)
T cd01078          29 KTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAGAA  107 (194)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECCCC
Confidence            479999999999999999999999999999998654322111    113456667888989889999999999997653

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=98.21  E-value=8.7e-06  Score=71.66  Aligned_cols=115  Identities=20%  Similarity=0.221  Sum_probs=76.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC--eEEEEEcCC--CCCCCCCCC--CCeEEE--EcCCCChhhHHHHhcCCCEEEEe
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRT--SDISGLPSE--GALELV--YGDVTDYRSLVDACFGCHVIFHT   72 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~--~V~~~~r~~--~~~~~~~~~--~~v~~~--~~Dl~d~~~~~~~~~~~d~vih~   72 (334)
                      |||.|+|+||.+|..++..|+..|+  +|++++|.+  +........  +.....  ...+.-..+. +.+.++|+||-+
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d~-~~l~~aDiViit   79 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDL-SDVAGSDIVIIT   79 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCCH-HHhCCCCEEEEe
Confidence            8999999999999999999999885  499999954  222111100  000000  0011111112 348899999999


Q ss_pred             ccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEeccc
Q 019878           73 AALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF  116 (334)
Q Consensus        73 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~  116 (334)
                      +|............++.|+...+.+++...+...-..+|.+++.
T Consensus        80 ag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~np  123 (309)
T cd05294          80 AGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTNP  123 (309)
T ss_pred             cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence            99754332334667889999999999998887443467777753

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.20  E-value=9.3e-07  Score=77.83  Aligned_cols=70  Identities=24%  Similarity=0.395  Sum_probs=52.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC-C-CeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ-G-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVE   77 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~-g-~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~   77 (334)
                      ++|+||||+|+||+.+++.|.++ | .+++++.|+..+...+..    ++..+|+.   .+.+++.++|+|||+++...
T Consensus       156 k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~----el~~~~i~---~l~~~l~~aDiVv~~ts~~~  227 (340)
T PRK14982        156 ATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQA----ELGGGKIL---SLEEALPEADIVVWVASMPK  227 (340)
T ss_pred             CEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHH----HhccccHH---hHHHHHccCCEEEECCcCCc
Confidence            46999999999999999999864 5 689999998765544332    22224443   46678889999999998643

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.18  E-value=5.1e-06  Score=75.28  Aligned_cols=71  Identities=21%  Similarity=0.362  Sum_probs=55.8

Q ss_pred             CcEEEEcC----------------CChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHh-
Q 019878            1 MKILVSGA----------------SGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC-   63 (334)
Q Consensus         1 m~ilItG~----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~-   63 (334)
                      ++||||||                +|.+|.++++.|.++|++|++++++.. .. .+  .+  ....|+++.+++.+++ 
T Consensus       189 k~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-~~--~~--~~~~dv~~~~~~~~~v~  262 (399)
T PRK05579        189 KRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-TP--AG--VKRIDVESAQEMLDAVL  262 (399)
T ss_pred             CEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-CC--CC--cEEEccCCHHHHHHHHH
Confidence            46999999                999999999999999999999988753 11 11  12  3456999988877665 


Q ss_pred             ---cCCCEEEEeccccC
Q 019878           64 ---FGCHVIFHTAALVE   77 (334)
Q Consensus        64 ---~~~d~vih~a~~~~   77 (334)
                         .++|++||+||...
T Consensus       263 ~~~~~~DilI~~Aav~d  279 (399)
T PRK05579        263 AALPQADIFIMAAAVAD  279 (399)
T ss_pred             HhcCCCCEEEEcccccc
Confidence               35899999999743

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=98.17  E-value=1.2e-05  Score=70.45  Aligned_cols=113  Identities=16%  Similarity=0.084  Sum_probs=79.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCCCC--CCC-CCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGL--PSE-GALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~--~~~-~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      |||.|+|++|.+|++++-.|..++  .++++++........+  ..- .........  ..+++.+.++++|+||-+||.
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~alDL~~~~~~~~i~~~~--~~~~~y~~~~daDivvitaG~   78 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHINTPAKVTGYL--GPEELKKALKGADVVVIPAGV   78 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceeehHhHhCCCcceEEEec--CCCchHHhcCCCCEEEEeCCC
Confidence            899999999999999999999887  5789988872111111  110 011111110  112345778899999999998


Q ss_pred             cCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecc
Q 019878           76 VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (334)
Q Consensus        76 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss  115 (334)
                      ...........++.|....+.+.+...++..-..++.+|-
T Consensus        79 ~~k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtN  118 (310)
T cd01337          79 PRKPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISN  118 (310)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence            5544445667899999999999999999854456777764

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=98.13  E-value=1.2e-05  Score=67.29  Aligned_cols=73  Identities=27%  Similarity=0.421  Sum_probs=62.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC-CCCCCCeEEEEcCCCChhhHHHH-hcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-LPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vih~a~   74 (334)
                      |+++|.| .|-+|..+++.|.++|++|++++++++.... .........+.+|-+|.+.++++ +.++|+++=+-+
T Consensus         1 m~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~   75 (225)
T COG0569           1 MKIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATG   75 (225)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeC
Confidence            8899998 8999999999999999999999999876554 33223688999999999999998 678999996655

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=98.07  E-value=0.00011  Score=59.86  Aligned_cols=210  Identities=17%  Similarity=0.148  Sum_probs=122.8

Q ss_pred             cEEEEcCCC--hhhHHHHHHHHhCCCeEEEEEcCCC---CCCCCCCC-CCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASG--YLGGRLCHALLKQGHSVRALVRRTS---DISGLPSE-GALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG--~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~~~-~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      |+||+|-.-  -|++.+++.|.++|.++......+.   +..++.+. +..-.++||+++.+++.++++       +.|.
T Consensus         8 ~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~g~lD~   87 (259)
T COG0623           8 RILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKWGKLDG   87 (259)
T ss_pred             eEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhhCcccE
Confidence            689998765  4999999999999999888766542   11122111 234578999999998887774       4899


Q ss_pred             EEEeccccCCCC----------CCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEecccceeccCCCccCCCCCcccccc
Q 019878           69 IFHTAALVEPWL----------PDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        69 vih~a~~~~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~  137 (334)
                      ++|+.+..+..+          ++....++.-......++++++...+ ...+|-+|   -+|.....|.          
T Consensus        88 lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLt---Ylgs~r~vPn----------  154 (259)
T COG0623          88 LVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLT---YLGSERVVPN----------  154 (259)
T ss_pred             EEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEE---eccceeecCC----------
Confidence            999999754211          11222334444444555566655422 12343333   1121111111          


Q ss_pred             ccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHH
Q 019878          138 FCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                       .+.-|..|+..|.-++.+.    ++|+++..+-.|.+-.-....- +.+..++.......+         .+.-+..+|
T Consensus       155 -YNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI-~~f~~~l~~~e~~aP---------l~r~vt~ee  223 (259)
T COG0623         155 -YNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGI-GDFRKMLKENEANAP---------LRRNVTIEE  223 (259)
T ss_pred             -CchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhcc-ccHHHHHHHHHhhCC---------ccCCCCHHH
Confidence             2568999999999888754    4577777666655432110001 113333333222222         122345889


Q ss_pred             HHHHHHHHhhc---CCCCCeEEe-cC
Q 019878          214 VVDGHIAAMEK---GRSGERYLL-TG  235 (334)
Q Consensus       214 ~a~a~~~~~~~---~~~g~~~~i-~g  235 (334)
                      |+..-+.++..   ..+|++.++ +|
T Consensus       224 VG~tA~fLlSdLssgiTGei~yVD~G  249 (259)
T COG0623         224 VGNTAAFLLSDLSSGITGEIIYVDSG  249 (259)
T ss_pred             hhhhHHHHhcchhcccccceEEEcCC
Confidence            98888877654   446888888 45

>PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A

Probab=98.06  E-value=5.6e-06  Score=53.75  Aligned_cols=33  Identities=27%  Similarity=0.614  Sum_probs=24.2

Q ss_pred             eechHHHHHhcCCCCC-CHHHHHHHHHHHHHhcC
Q 019878          298 AYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSSG  330 (334)
Q Consensus       298 ~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~~  330 (334)
                      +.|++|++++|||+|+ +++++++++.+|+.++.
T Consensus        26 ~Ad~~kA~~~LgW~p~~~L~~~i~~~w~W~~~np   59 (62)
T PF13950_consen   26 VADISKAREELGWKPKYSLEDMIRDAWNWQKKNP   59 (62)
T ss_dssp             -B--HHHHHHC----SSSHHHHHHHHHHHHHHST
T ss_pred             hCCHHHHHHHhCCCcCCCHHHHHHHHHHHHHHCc
Confidence            4699999999999999 99999999999998863

...

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.04  E-value=4.2e-06  Score=72.17  Aligned_cols=75  Identities=17%  Similarity=0.275  Sum_probs=61.2

Q ss_pred             EEEEcCCChhhHHHHHHHHh----CCCeEEEEEcCCCCCCCC---------CCCCCeEEEEcCCCChhhHHHHhcCCCEE
Q 019878            3 ILVSGASGYLGGRLCHALLK----QGHSVRALVRRTSDISGL---------PSEGALELVYGDVTDYRSLVDACFGCHVI   69 (334)
Q Consensus         3 ilItG~tG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~---------~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   69 (334)
                      ++|.||+||-|..+++++.+    .|...-+..|++.+....         ........+.+|..|++++.+...++-+|
T Consensus         8 vVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~vi   87 (423)
T KOG2733|consen    8 VVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQARVI   87 (423)
T ss_pred             EEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhEEE
Confidence            78999999999999999998    678889999987653211         11123348889999999999999999999


Q ss_pred             EEeccccC
Q 019878           70 FHTAALVE   77 (334)
Q Consensus        70 ih~a~~~~   77 (334)
                      +||+|...
T Consensus        88 vN~vGPyR   95 (423)
T KOG2733|consen   88 VNCVGPYR   95 (423)
T ss_pred             Eeccccce
Confidence            99999743

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.04  E-value=7.5e-06  Score=68.68  Aligned_cols=62  Identities=16%  Similarity=0.281  Sum_probs=45.1

Q ss_pred             CCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHh-------cCCCEEEEecccc
Q 019878            8 ASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC-------FGCHVIFHTAALV   76 (334)
Q Consensus         8 ~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~-------~~~d~vih~a~~~   76 (334)
                      ++|.||.++++.|+++|++|+++++... .   ..   .....+|+.+.+...+++       .++|++||+||..
T Consensus        23 SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l---~~---~~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv~   91 (227)
T TIGR02114        23 STGHLGKIITETFLSAGHEVTLVTTKRA-L---KP---EPHPNLSIREIETTKDLLITLKELVQEHDILIHSMAVS   91 (227)
T ss_pred             cccHHHHHHHHHHHHCCCEEEEEcChhh-c---cc---ccCCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEec
Confidence            3899999999999999999999876422 1   11   011346888876665543       3589999999974

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=98.03  E-value=3.1e-05  Score=68.28  Aligned_cols=114  Identities=13%  Similarity=0.103  Sum_probs=76.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC--C-----eEEEEEcCCCC--CCCCCC-CCCeE-EEEcCCCChhhHHHHhcCCCEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG--H-----SVRALVRRTSD--ISGLPS-EGALE-LVYGDVTDYRSLVDACFGCHVI   69 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g--~-----~V~~~~r~~~~--~~~~~~-~~~v~-~~~~Dl~d~~~~~~~~~~~d~v   69 (334)
                      +||.|+|++|++|++++..|..++  .     +++.+++.+..  ...... ..... ....+..-.....+.++++|+|
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daDvV   83 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVATTDPEEAFKDVDAA   83 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEecChHHHhCCCCEE
Confidence            479999999999999999999877  3     78999886521  211000 00000 0000110012235677899999


Q ss_pred             EEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEec
Q 019878           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTS  114 (334)
Q Consensus        70 ih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~S  114 (334)
                      |.+||............+..|....+.+.+.+.++.. -..++.+|
T Consensus        84 VitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs  129 (323)
T TIGR01759        84 LLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG  129 (323)
T ss_pred             EEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence            9999986544456677899999999999999999843 44566666

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.98  E-value=7.8e-05  Score=65.72  Aligned_cols=106  Identities=17%  Similarity=0.257  Sum_probs=77.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCCCCCCC---------CCeEEEEcCCCChhhHHHHhcCCCEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLPSE---------GALELVYGDVTDYRSLVDACFGCHVI   69 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~---------~~v~~~~~Dl~d~~~~~~~~~~~d~v   69 (334)
                      +||.|.| +|.+|+.++..|+.+|  +++.+++++++....+...         ..+....   .+.    +.+.++|+|
T Consensus         1 ~kI~IIG-aG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~----~~l~~aDIV   72 (306)
T cd05291           1 RKVVIIG-AGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDY----SDCKDADIV   72 (306)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCH----HHhCCCCEE
Confidence            5899999 5999999999999998  6899999987754322110         1122221   122    245789999


Q ss_pred             EEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        70 ih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      |+++|.......+....++.|....+.+.+.+.++..-..++.+|
T Consensus        73 Iitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvs  117 (306)
T cd05291          73 VITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVAS  117 (306)
T ss_pred             EEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            999998554444556788999999999999999985444666666

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.96  E-value=2.7e-05  Score=72.75  Aligned_cols=73  Identities=21%  Similarity=0.293  Sum_probs=61.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHH-hcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vih~a~   74 (334)
                      |+|+|.|+ |.+|+++++.|.++|++|+++++++.....+....+++++.+|.++...+.++ +.++|.||-+..
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~   74 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVTD   74 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecC
Confidence            89999996 99999999999999999999999877655443323689999999999998888 788999987754

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.94  E-value=3.2e-05  Score=68.23  Aligned_cols=106  Identities=17%  Similarity=0.203  Sum_probs=75.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC--eEEEEEcCCCCCCCC----CC----CCCeEEEEcCCCChhhHHHHhcCCCEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGL----PS----EGALELVYGDVTDYRSLVDACFGCHVIF   70 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~----~~----~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   70 (334)
                      +||.|+|+ |.+|+.++..|..+|.  ++..++++.+.....    ..    ..++.....   +    .+.++++|+||
T Consensus         7 ~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~---~----~~~~~~adivI   78 (315)
T PRK00066          7 NKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAG---D----YSDCKDADLVV   78 (315)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeC---C----HHHhCCCCEEE
Confidence            57999997 9999999999998885  799999976643211    00    012222211   2    24578999999


Q ss_pred             EeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        71 h~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      .+||............+..|....+.+++.+.++..-..++.+|
T Consensus        79 itag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs  122 (315)
T PRK00066         79 ITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS  122 (315)
T ss_pred             EecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            99998554334556788999999999999999874434666665

>PRK05442 malate dehydrogenase; Provisional

Probab=97.91  E-value=0.00012  Score=64.73  Aligned_cols=106  Identities=16%  Similarity=0.116  Sum_probs=75.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC--C-----eEEEEEcCCCC--CCCCCCCCCeEEEEcCCCCh-----------hhHH
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG--H-----SVRALVRRTSD--ISGLPSEGALELVYGDVTDY-----------RSLV   60 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g--~-----~V~~~~r~~~~--~~~~~~~~~v~~~~~Dl~d~-----------~~~~   60 (334)
                      +||.|+|++|.+|+.++..|...+  .     ++..+++.+..  ...         ...|+.+.           ....
T Consensus         5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g---------~a~Dl~~~~~~~~~~~~i~~~~y   75 (326)
T PRK05442          5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEG---------VVMELDDCAFPLLAGVVITDDPN   75 (326)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccce---------eehhhhhhhhhhcCCcEEecChH
Confidence            479999999999999999998765  2     78898885432  111         11111111           1234


Q ss_pred             HHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecc
Q 019878           61 DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSS  115 (334)
Q Consensus        61 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss  115 (334)
                      +.++++|+||-+||............+..|....+.+.+...++. .-..++.+|.
T Consensus        76 ~~~~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsN  131 (326)
T PRK05442         76 VAFKDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGN  131 (326)
T ss_pred             HHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence            677889999999997554445667789999999999999999963 2446777773

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.88  E-value=0.00013  Score=63.36  Aligned_cols=108  Identities=21%  Similarity=0.254  Sum_probs=76.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCCCCCC--CCCe------EEEEcCCCChhhHHHHhcCCCEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLPS--EGAL------ELVYGDVTDYRSLVDACFGCHVIF   70 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~--~~~v------~~~~~Dl~d~~~~~~~~~~~d~vi   70 (334)
                      |||.|+|+ |+||+.++-.|..++  .+++++++..+.......  ....      ..+.+| .+    -+.+++.|+|+
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~----y~~~~~aDiVv   74 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GD----YEDLKGADIVV   74 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CC----hhhhcCCCEEE
Confidence            79999999 999999999998765  489999998543321110  0001      112222 11    45678899999


Q ss_pred             EeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        71 h~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      -.||..........+.+..|..-.+.+.....++..-..|+.+|
T Consensus        75 itAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvt  118 (313)
T COG0039          75 ITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVT  118 (313)
T ss_pred             EeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEec
Confidence            99998666555667889999999999999999984434566555

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.84  E-value=0.00012  Score=64.36  Aligned_cols=112  Identities=21%  Similarity=0.119  Sum_probs=77.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCCCCCCCC---CeEEEEcCCCChhhHHHHhcCCCEEEEecccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLPSEG---ALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~---~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~   76 (334)
                      ||.|+|++|.+|++++-.|..++  .+++++++.+.....+.-..   ........  +.+++.+.++++|+||-+||..
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~DL~~~~~~~~i~~~~--~~~~~~~~~~daDivvitaG~~   78 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHIPTAASVKGFS--GEEGLENALKGADVVVIPAGVP   78 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEchhhcCCcCceEEEec--CCCchHHHcCCCCEEEEeCCCC
Confidence            68999999999999999998876  47889988763221111000   11111100  1123456889999999999985


Q ss_pred             CCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecc
Q 019878           77 EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (334)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss  115 (334)
                      ..........++.|..-.+.+.+...++..-..++.+|-
T Consensus        79 ~~~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsN  117 (312)
T TIGR01772        79 RKPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITN  117 (312)
T ss_pred             CCCCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecC
Confidence            544455667889999999999999999854445676664

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.80  E-value=0.00012  Score=65.31  Aligned_cols=93  Identities=24%  Similarity=0.264  Sum_probs=60.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCe---EEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHS---VRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVE   77 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~   77 (334)
                      |||+|.||||++|+.|++.|.+++|.   +..+.+.......+.- .+.+....|+.+.     .+.++|+||-+++.. 
T Consensus         2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~-~g~~i~v~d~~~~-----~~~~vDvVf~A~g~g-   74 (334)
T PRK14874          2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSF-KGKELKVEDLTTF-----DFSGVDIALFSAGGS-   74 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeee-CCceeEEeeCCHH-----HHcCCCEEEECCChH-
Confidence            78999999999999999999998764   4777766544333321 1234444455432     236899999887631 


Q ss_pred             CCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccc
Q 019878           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF  117 (334)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~  117 (334)
                                     .+..++....+. ++ ++|=.|+..
T Consensus        75 ---------------~s~~~~~~~~~~-G~-~VIDlS~~~   97 (334)
T PRK14874         75 ---------------VSKKYAPKAAAA-GA-VVIDNSSAF   97 (334)
T ss_pred             ---------------HHHHHHHHHHhC-CC-EEEECCchh
Confidence                           123445555554 33 677777653

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=97.78  E-value=0.00011  Score=66.30  Aligned_cols=102  Identities=20%  Similarity=0.254  Sum_probs=66.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC-CCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHH-HhcCCCEEEEeccccCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD-ACFGCHVIFHTAALVEP   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~-~~~~~d~vih~a~~~~~   78 (334)
                      |||.|.||||++|..|++.|.++ +.++..+.++......+... ......+|+.+.+.+.. .++++|+|+-+.+..  
T Consensus        39 ~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~-~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~~--  115 (381)
T PLN02968         39 KRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSV-FPHLITQDLPNLVAVKDADFSDVDAVFCCLPHG--  115 (381)
T ss_pred             cEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhh-CccccCccccceecCCHHHhcCCCEEEEcCCHH--
Confidence            58999999999999999999987 57899988765443222211 11222234443333322 257899999876521  


Q ss_pred             CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccC
Q 019878           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST  122 (334)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~  122 (334)
                                    .+..++..+. . + +++|-.|+..-+.+.
T Consensus       116 --------------~s~~i~~~~~-~-g-~~VIDlSs~fRl~~~  142 (381)
T PLN02968        116 --------------TTQEIIKALP-K-D-LKIVDLSADFRLRDI  142 (381)
T ss_pred             --------------HHHHHHHHHh-C-C-CEEEEcCchhccCCc
Confidence                          4456666653 3 3 589999997766543

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.78  E-value=1.1e-05  Score=69.16  Aligned_cols=73  Identities=19%  Similarity=0.261  Sum_probs=59.6

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         3 ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      ++|-|||||.|..++++|.+.|.+-.+..|+..+.+.+...-+-++...++-++..+.+.+++.++|+||+|.
T Consensus         9 ~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~~~~VVlncvGP   81 (382)
T COG3268           9 IIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMASRTQVVLNCVGP   81 (382)
T ss_pred             EEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHHHHhcceEEEecccc
Confidence            7899999999999999999999998888999887764433323344444555688999999999999999996

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.70  E-value=0.00013  Score=55.13  Aligned_cols=92  Identities=20%  Similarity=0.269  Sum_probs=55.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHh-CCCeEEEEEcCCC-CCCC--CCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecccc
Q 019878            1 MKILVSGASGYLGGRLCHALLK-QGHSVRALVRRTS-DISG--LPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~-~g~~V~~~~r~~~-~~~~--~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~   76 (334)
                      |||+|.|++|-.|+.+++.+.+ .+.++.+...+.. ....  +....+..  .....-.+++.++++.+|+||.+.   
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~--~~~~~v~~~l~~~~~~~DVvIDfT---   75 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIG--PLGVPVTDDLEELLEEADVVIDFT---   75 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSS--T-SSBEBS-HHHHTTH-SEEEEES---
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcC--CcccccchhHHHhcccCCEEEEcC---
Confidence            8999999999999999999998 6778666544433 1110  00000000  011112255677887899999885   


Q ss_pred             CCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEE
Q 019878           77 EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY  112 (334)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~  112 (334)
                                   +-..+...++.|.++ ++ .+|.
T Consensus        76 -------------~p~~~~~~~~~~~~~-g~-~~Vi   96 (124)
T PF01113_consen   76 -------------NPDAVYDNLEYALKH-GV-PLVI   96 (124)
T ss_dssp             --------------HHHHHHHHHHHHHH-T--EEEE
T ss_pred             -------------ChHHhHHHHHHHHhC-CC-CEEE
Confidence                         234556788888887 43 4443

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=97.68  E-value=0.00014  Score=64.12  Aligned_cols=106  Identities=21%  Similarity=0.302  Sum_probs=74.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCCC----CCCC----CCeEEEEcCCCChhhHHHHhcCCCEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG----LPSE----GALELVYGDVTDYRSLVDACFGCHVIF   70 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~----~~~~----~~v~~~~~Dl~d~~~~~~~~~~~d~vi   70 (334)
                      |||.|.|+ |.+|..++..|+.+|  .+|.+++++++....    +...    ........   |    .+.++++|+||
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~---d----~~~l~~aDiVi   72 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAG---D----YADCKGADVVV   72 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeC---C----HHHhCCCCEEE
Confidence            89999996 999999999999998  689999998754321    1110    11222211   2    23578999999


Q ss_pred             EeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        71 h~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      -+++.......+.......|+...+.+.+.+.++..-..++.++
T Consensus        73 ita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~t  116 (308)
T cd05292          73 ITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVT  116 (308)
T ss_pred             EccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            99997443333445677889999999999998874333555554

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK04148 hypothetical protein; Provisional

Probab=97.66  E-value=0.00013  Score=55.06  Aligned_cols=90  Identities=18%  Similarity=0.219  Sum_probs=66.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~   80 (334)
                      |+|++.| +| -|.+++..|.+.|++|++++.++...+.... ..++++.+|+.+++  .+.-+++|.|+-+        
T Consensus        18 ~kileIG-~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~-~~~~~v~dDlf~p~--~~~y~~a~liysi--------   84 (134)
T PRK04148         18 KKIVELG-IG-FYFKVAKKLKESGFDVIVIDINEKAVEKAKK-LGLNAFVDDLFNPN--LEIYKNAKLIYSI--------   84 (134)
T ss_pred             CEEEEEE-ec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH-hCCeEEECcCCCCC--HHHHhcCCEEEEe--------
Confidence            5789999 67 8999999999999999999999875443322 25789999999877  4555678888855        


Q ss_pred             CCcccchhhhhHHHHHHHHHHHhcCCCcEEE
Q 019878           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKII  111 (334)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v  111 (334)
                      ..+.+++       ..+++.+++. ++.-+|
T Consensus        85 rpp~el~-------~~~~~la~~~-~~~~~i  107 (134)
T PRK04148         85 RPPRDLQ-------PFILELAKKI-NVPLII  107 (134)
T ss_pred             CCCHHHH-------HHHHHHHHHc-CCCEEE
Confidence            2333333       4788889888 444333

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=97.65  E-value=4.7e-05  Score=66.42  Aligned_cols=73  Identities=14%  Similarity=0.119  Sum_probs=55.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCe-EEEEEcCC---CCCCCC----CCC-CCeEEEEcCCCChhhHHHHhcCCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHS-VRALVRRT---SDISGL----PSE-GALELVYGDVTDYRSLVDACFGCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~-V~~~~r~~---~~~~~~----~~~-~~v~~~~~Dl~d~~~~~~~~~~~d~vih~   72 (334)
                      +++|+|+ |.+|++++..|++.|.+ |++++|+.   ++...+    ... ..+....+|+.+.+.+.+.++.+|+|||+
T Consensus       128 ~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~DilINa  206 (289)
T PRK12548        128 KLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDILVNA  206 (289)
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEEEEe
Confidence            5899998 89999999999999986 99999986   222211    110 23455677888888888888889999998


Q ss_pred             ccc
Q 019878           73 AAL   75 (334)
Q Consensus        73 a~~   75 (334)
                      -..
T Consensus       207 Tp~  209 (289)
T PRK12548        207 TLV  209 (289)
T ss_pred             CCC
Confidence            765

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.65  E-value=0.00012  Score=66.95  Aligned_cols=107  Identities=14%  Similarity=0.117  Sum_probs=77.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhC-------C--CeEEEEEcCCCCCCCCCC---------CCCeEEEEcCCCChhhHHHHh
Q 019878            2 KILVSGASGYLGGRLCHALLKQ-------G--HSVRALVRRTSDISGLPS---------EGALELVYGDVTDYRSLVDAC   63 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~-------g--~~V~~~~r~~~~~~~~~~---------~~~v~~~~~Dl~d~~~~~~~~   63 (334)
                      ||.|+|++|.+|.+++-.|...       +  .+++.+++..+.......         ..++.+..+   +    .+.+
T Consensus       102 KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~---~----ye~~  174 (444)
T PLN00112        102 NVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGID---P----YEVF  174 (444)
T ss_pred             EEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecC---C----HHHh
Confidence            6999999999999999999987       5  378888887765432100         011221111   2    4567


Q ss_pred             cCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHh-cCCCcEEEEecc
Q 019878           64 FGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKE-TKTVEKIIYTSS  115 (334)
Q Consensus        64 ~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~~v~~Ss  115 (334)
                      +++|+||-+||.......+....++.|....+.+.+...+ +..-..+|.+|.
T Consensus       175 kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsN  227 (444)
T PLN00112        175 QDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGN  227 (444)
T ss_pred             CcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCC
Confidence            8899999999985544455667899999999999999999 444456777773

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=97.60  E-value=0.00021  Score=64.72  Aligned_cols=98  Identities=15%  Similarity=0.213  Sum_probs=68.2

Q ss_pred             CcEEEEcC----------------CChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhH-HHHh
Q 019878            1 MKILVSGA----------------SGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSL-VDAC   63 (334)
Q Consensus         1 m~ilItG~----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~-~~~~   63 (334)
                      ++||||||                +|.+|.++++.|..+|++|+++.+.....  .+.  .+  ...|+.+.+++ ..++
T Consensus       186 ~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~--~~~--~~--~~~~v~~~~~~~~~~~  259 (390)
T TIGR00521       186 KRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL--TPP--GV--KSIKVSTAEEMLEAAL  259 (390)
T ss_pred             ceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC--CCC--Cc--EEEEeccHHHHHHHHH
Confidence            36999998                46899999999999999999988765422  111  23  44688888777 4343


Q ss_pred             ----cCCCEEEEeccccCCCC-----C---CcccchhhhhHHHHHHHHHHHhc
Q 019878           64 ----FGCHVIFHTAALVEPWL-----P---DPSRFFAVNVEGLKNVVQAAKET  104 (334)
Q Consensus        64 ----~~~d~vih~a~~~~~~~-----~---~~~~~~~~n~~~~~~l~~~~~~~  104 (334)
                          .+.|++||+||..+...     .   .....+..|+.-+..++...++.
T Consensus       260 ~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~  312 (390)
T TIGR00521       260 NELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKI  312 (390)
T ss_pred             HhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhh
Confidence                35899999999843311     1   11223456777788888888765

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=97.58  E-value=0.00031  Score=61.72  Aligned_cols=113  Identities=19%  Similarity=0.156  Sum_probs=73.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCC----CCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      |||.|.|+ |.+|..++..|+.+|+ +|+++++.++....    +............+.-..++.. ++++|+||-++|.
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~-~~~aDiVIitag~   79 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYAD-TANSDIVVITAGL   79 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHH-hCCCCEEEEcCCC
Confidence            78999995 9999999999999876 89999986542210    0000000000111111122333 5789999999996


Q ss_pred             cCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecc
Q 019878           76 VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (334)
Q Consensus        76 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss  115 (334)
                      ...........+..|....+.+++...++..-..+|.+|.
T Consensus        80 p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN  119 (305)
T TIGR01763        80 PRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSN  119 (305)
T ss_pred             CCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            4432233445778999999999999988744445666663

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.54  E-value=0.00036  Score=56.34  Aligned_cols=65  Identities=17%  Similarity=0.302  Sum_probs=41.1

Q ss_pred             CCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhH----HHHhcCCCEEEEeccccCC
Q 019878            8 ASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSL----VDACFGCHVIFHTAALVEP   78 (334)
Q Consensus         8 ~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~----~~~~~~~d~vih~a~~~~~   78 (334)
                      +||-.|.+|++.+..+|++|+.+..... .   +.+.+++.+...  +.+++    .+.+.+.|++||+|+..+.
T Consensus        27 SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~---~~p~~~~~i~v~--sa~em~~~~~~~~~~~Di~I~aAAVsDf   95 (185)
T PF04127_consen   27 SSGKMGAALAEEAARRGAEVTLIHGPSS-L---PPPPGVKVIRVE--SAEEMLEAVKELLPSADIIIMAAAVSDF   95 (185)
T ss_dssp             --SHHHHHHHHHHHHTT-EEEEEE-TTS--------TTEEEEE-S--SHHHHHHHHHHHGGGGSEEEE-SB--SE
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEEecCcc-c---cccccceEEEec--chhhhhhhhccccCcceeEEEecchhhe
Confidence            3799999999999999999999988742 1   112367777644  54444    4444568999999998543

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.53  E-value=0.00045  Score=61.19  Aligned_cols=113  Identities=18%  Similarity=0.139  Sum_probs=74.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCC--CCCCCCeEEE--EcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISG--LPSEGALELV--YGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~--~~~~~~v~~~--~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      |||.|+|+ |.+|+.++..|...| .+++.++++++....  +.........  ...+....+++ .+.++|+||.+++.
T Consensus         6 ~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~-~l~~ADiVVitag~   83 (319)
T PTZ00117          6 KKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYE-DIKDSDVVVITAGV   83 (319)
T ss_pred             cEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHH-HhCCCCEEEECCCC
Confidence            58999996 999999999999888 689999998754321  1000000000  00111112334 67899999999987


Q ss_pred             cCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecc
Q 019878           76 VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (334)
Q Consensus        76 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss  115 (334)
                      ...........+..|....+.+++.+.++..-..++.+|.
T Consensus        84 ~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsN  123 (319)
T PTZ00117         84 QRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTN  123 (319)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            5443344556788899999999999998843334777664

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.52  E-value=0.00013  Score=64.40  Aligned_cols=35  Identities=20%  Similarity=0.373  Sum_probs=32.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~   36 (334)
                      |+|.|+| +|.+|..++..|++.|++|++.+|++..
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~   37 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAA   37 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHH
Confidence            5899999 9999999999999999999999998653

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.51  E-value=0.0015  Score=50.14  Aligned_cols=101  Identities=13%  Similarity=0.187  Sum_probs=68.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCC------------------------C--CeEEEEcCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSE------------------------G--ALELVYGDV   53 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~------------------------~--~v~~~~~Dl   53 (334)
                      .||+|.| .|.+|+.+++.|...|. +++++|.+.-...++..+                        +  +++.+..++
T Consensus         3 ~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~   81 (135)
T PF00899_consen    3 KRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI   81 (135)
T ss_dssp             -EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred             CEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence            3789999 89999999999999995 788888754322222111                        2  355565565


Q ss_pred             CChhhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceec
Q 019878           54 TDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG  120 (334)
Q Consensus        54 ~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~  120 (334)
                       +.+...+.++++|+||.+..               |...-..+.+.|+++ + ..+|..++.+.+|
T Consensus        82 -~~~~~~~~~~~~d~vi~~~d---------------~~~~~~~l~~~~~~~-~-~p~i~~~~~g~~G  130 (135)
T PF00899_consen   82 -DEENIEELLKDYDIVIDCVD---------------SLAARLLLNEICREY-G-IPFIDAGVNGFYG  130 (135)
T ss_dssp             -SHHHHHHHHHTSSEEEEESS---------------SHHHHHHHHHHHHHT-T--EEEEEEEETTEE
T ss_pred             -ccccccccccCCCEEEEecC---------------CHHHHHHHHHHHHHc-C-CCEEEEEeecCEE
Confidence             44566777788999998753               233345677788887 3 3788888766555

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.49  E-value=0.0016  Score=58.07  Aligned_cols=101  Identities=26%  Similarity=0.313  Sum_probs=68.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCC--------------------------C--CeEEEEcC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSE--------------------------G--ALELVYGD   52 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~--------------------------~--~v~~~~~D   52 (334)
                      +|+|.| .|.+|+++++.|...|. ++.+++.+.-...++..+                          +  .++.+..+
T Consensus        26 ~VlVvG-~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~~~  104 (339)
T PRK07688         26 HVLIIG-AGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIVQD  104 (339)
T ss_pred             cEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEecc
Confidence            699999 59999999999999996 899988864222111110                          1  24455556


Q ss_pred             CCChhhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceecc
Q 019878           53 VTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS  121 (334)
Q Consensus        53 l~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~  121 (334)
                      ++ .+.+.++++++|+||.+.-               |...-..+.++|.+. + ..+|+.|+.+.||.
T Consensus       105 ~~-~~~~~~~~~~~DlVid~~D---------------n~~~r~~ln~~~~~~-~-iP~i~~~~~g~~G~  155 (339)
T PRK07688        105 VT-AEELEELVTGVDLIIDATD---------------NFETRFIVNDAAQKY-G-IPWIYGACVGSYGL  155 (339)
T ss_pred             CC-HHHHHHHHcCCCEEEEcCC---------------CHHHHHHHHHHHHHh-C-CCEEEEeeeeeeeE
Confidence            54 3445666778888887742               333444677888887 3 47888888777764

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=97.46  E-value=0.0009  Score=58.95  Aligned_cols=107  Identities=15%  Similarity=0.135  Sum_probs=74.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCCCC----CC----CCCeEEEEcCCCChhhHHHHhcCCCEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGL----PS----EGALELVYGDVTDYRSLVDACFGCHVIF   70 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~----~~----~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   70 (334)
                      |||.|+|+ |.+|+.++..|...|  .++++++..++.....    ..    .........  .|   ++ .++++|+||
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~d---y~-~~~~adivv   76 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KD---YS-VTANSKVVI   76 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CC---HH-HhCCCCEEE
Confidence            68999995 999999999998876  5789999876533210    00    001122211  12   22 378999999


Q ss_pred             EeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        71 h~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      -+||............+..|..-.+.+.+...++..-..++.+|
T Consensus        77 itaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs  120 (312)
T cd05293          77 VTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVS  120 (312)
T ss_pred             ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEcc
Confidence            99997544334455688999999999999999985444666666

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.44  E-value=0.00052  Score=60.94  Aligned_cols=94  Identities=20%  Similarity=0.246  Sum_probs=55.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCe---EEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHS---VRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVE   77 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~   77 (334)
                      |+|+|+||||++|+.|++.|.++++.   +..+.........+.. .+   ...++.+.+.. . ++++|+|+-+.+.. 
T Consensus         5 ~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~~-~~---~~l~~~~~~~~-~-~~~vD~vFla~p~~-   77 (336)
T PRK05671          5 LDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVPF-AG---KNLRVREVDSF-D-FSQVQLAFFAAGAA-   77 (336)
T ss_pred             CEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeecc-CC---cceEEeeCChH-H-hcCCCEEEEcCCHH-
Confidence            47999999999999999999976653   3344333222111211 11   12333333322 2 47899998876520 


Q ss_pred             CCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccce
Q 019878           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA  118 (334)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v  118 (334)
                                     ....++..+.+. + .++|=.|+..=
T Consensus        78 ---------------~s~~~v~~~~~~-G-~~VIDlS~~fR  101 (336)
T PRK05671         78 ---------------VSRSFAEKARAA-G-CSVIDLSGALP  101 (336)
T ss_pred             ---------------HHHHHHHHHHHC-C-CeEEECchhhc
Confidence                           123466777665 3 37888887654

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=97.44  E-value=0.00064  Score=57.08  Aligned_cols=112  Identities=19%  Similarity=0.111  Sum_probs=74.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCC--CCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccC
Q 019878            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDI--SGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVE   77 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~--~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~   77 (334)
                      ||.|.||+|.||+.|.-.|..+.  -+....+....+.  .++... +-.......+-.+.+.+++++.|+||--||...
T Consensus        30 KVAvlGAaGGIGQPLSLLlK~np~Vs~LaLYDi~~~~GVaaDlSHI-~T~s~V~g~~g~~~L~~al~~advVvIPAGVPR  108 (345)
T KOG1494|consen   30 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIANTPGVAADLSHI-NTNSSVVGFTGADGLENALKGADVVVIPAGVPR  108 (345)
T ss_pred             eEEEEecCCccCccHHHHHhcCcccceeeeeecccCCccccccccc-CCCCceeccCChhHHHHHhcCCCEEEecCCCCC
Confidence            69999999999999988776442  1233333332211  111110 111222344556789999999999999999866


Q ss_pred             CCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      ...-..+..|.+|..-.+.|..++.++-.-..+.++|
T Consensus       109 KPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIs  145 (345)
T KOG1494|consen  109 KPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVIS  145 (345)
T ss_pred             CCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeec
Confidence            5444567899999999999999999973223455555

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.44  E-value=0.0024  Score=56.88  Aligned_cols=101  Identities=22%  Similarity=0.259  Sum_probs=67.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCC----------------------------CCCeEEEEcC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPS----------------------------EGALELVYGD   52 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~----------------------------~~~v~~~~~D   52 (334)
                      +|+|.| .|.+|+++++.|...|. ++++++++.-...++..                            .-.++.+..|
T Consensus        26 ~VlIiG-~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~~~  104 (338)
T PRK12475         26 HVLIVG-AGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVVTD  104 (338)
T ss_pred             cEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEecc
Confidence            699999 57799999999999996 78888887532222111                            0135556667


Q ss_pred             CCChhhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceecc
Q 019878           53 VTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS  121 (334)
Q Consensus        53 l~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~  121 (334)
                      ++ .+.+.++++++|+||.+..               |...-..+-+.|.++ + ..+|+.+..+.+|.
T Consensus       105 ~~-~~~~~~~~~~~DlVid~~D---------------~~~~r~~in~~~~~~-~-ip~i~~~~~g~~G~  155 (338)
T PRK12475        105 VT-VEELEELVKEVDLIIDATD---------------NFDTRLLINDLSQKY-N-IPWIYGGCVGSYGV  155 (338)
T ss_pred             CC-HHHHHHHhcCCCEEEEcCC---------------CHHHHHHHHHHHHHc-C-CCEEEEEecccEEE
Confidence            64 4556777888999998752               222223455777776 4 36788777666663

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=97.43  E-value=0.003  Score=55.51  Aligned_cols=105  Identities=18%  Similarity=0.218  Sum_probs=74.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCCC----CCC------CCCeEEEEcCCCChhhHHHHhcCCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG----LPS------EGALELVYGDVTDYRSLVDACFGCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~----~~~------~~~v~~~~~Dl~d~~~~~~~~~~~d~v   69 (334)
                      ||.|.|+ |.+|+.++..|+.++  .++++++..++....    +..      ..+++...+|       .+.++++|+|
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~-------y~~~~~aDiv   72 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGD-------YDDCADADII   72 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECC-------HHHhCCCCEE
Confidence            6889997 999999999999877  479999987654321    110      0123333333       4567899999


Q ss_pred             EEeccccCCCCCC--cccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           70 FHTAALVEPWLPD--PSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        70 ih~a~~~~~~~~~--~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      |-+||........  ....+..|....+.+...+.++..-..++.+|
T Consensus        73 vitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvs  119 (307)
T cd05290          73 VITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILIT  119 (307)
T ss_pred             EECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            9999975432222  36788999999999999999985434566555

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.43  E-value=0.00054  Score=60.53  Aligned_cols=112  Identities=20%  Similarity=0.195  Sum_probs=72.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCC----CCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGL----PSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~----~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      |||.|.|+ |.+|+.++..|+..|. +|++++++++.....    ............+.....+ +.++++|+||.+++.
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVii~~~~   80 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVVITAGV   80 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEEECCCC
Confidence            68999997 9999999999998765 899999976543210    0000000000111111123 357899999999986


Q ss_pred             cCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           76 VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        76 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      .........+.+..|+...+.+++...+...-..+|.+|
T Consensus        81 p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~t  119 (307)
T PRK06223         81 PRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVT  119 (307)
T ss_pred             CCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            433223334566789999999999998874334566665

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=97.41  E-value=0.0004  Score=61.53  Aligned_cols=113  Identities=19%  Similarity=0.209  Sum_probs=74.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEc-----------C--CCChhhHHHHhcCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYG-----------D--VTDYRSLVDACFGCH   67 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~-----------D--l~d~~~~~~~~~~~d   67 (334)
                      |||-|.| +|++|...+-.|++.||+|++++.++.+.+.+... ...+++-           +  |+-..+..+++++.|
T Consensus         1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g-~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~~~ad   78 (414)
T COG1004           1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDIDESKVELLNKG-ISPIYEPGLEELLKENLASGRLRFTTDYEEAVKDAD   78 (414)
T ss_pred             CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHhCC-CCCCcCccHHHHHHhccccCcEEEEcCHHHHHhcCC
Confidence            9999999 99999999999999999999999987765433321 1111111           1  222234567778899


Q ss_pred             EEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceecc
Q 019878           68 VIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS  121 (334)
Q Consensus        68 ~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~  121 (334)
                      +++-+-|-      ++...-..++..+..+++...++..-.++|.+=|+-.-|.
T Consensus        79 v~fIavgT------P~~~dg~aDl~~V~ava~~i~~~~~~~~vvV~KSTVPvGt  126 (414)
T COG1004          79 VVFIAVGT------PPDEDGSADLSYVEAVAKDIGEILDGKAVVVIKSTVPVGT  126 (414)
T ss_pred             EEEEEcCC------CCCCCCCccHHHHHHHHHHHHhhcCCCeEEEEcCCCCCCc
Confidence            99888773      2222233456667777777777643336666666555553

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=97.41  E-value=0.00014  Score=58.94  Aligned_cols=35  Identities=40%  Similarity=0.540  Sum_probs=28.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~   36 (334)
                      |||-|.| .|++|..++..|++.|++|++++.++..
T Consensus         1 M~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~~~~~   35 (185)
T PF03721_consen    1 MKIAVIG-LGYVGLPLAAALAEKGHQVIGVDIDEEK   35 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HHH
T ss_pred             CEEEEEC-CCcchHHHHHHHHhCCCEEEEEeCChHH
Confidence            9999997 9999999999999999999999997653

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.39  E-value=0.00048  Score=59.37  Aligned_cols=112  Identities=20%  Similarity=0.126  Sum_probs=75.9

Q ss_pred             EEEEcCCChhhHHHHHHHHhCC----CeEEEEEcCCCCCCCCCCC-C-CeEEE-EcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            3 ILVSGASGYLGGRLCHALLKQG----HSVRALVRRTSDISGLPSE-G-ALELV-YGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         3 ilItG~tG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~-~-~v~~~-~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      |.|.|++|.+|..++..|+..|    .++..+++++++....... . -.... ...+.-.+++.+.++++|+||-+++.
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~~   80 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAGV   80 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCCC
Confidence            5799999999999999999888    7899999887554321100 0 00000 11222222346778999999999987


Q ss_pred             cCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           76 VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        76 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      ..............|+...+.+++.+.++..-..++..|
T Consensus        81 ~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t  119 (263)
T cd00650          81 GRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS  119 (263)
T ss_pred             CCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            544333344577889999999999999884434566655

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PLN02602 lactate dehydrogenase

Probab=97.38  E-value=0.0015  Score=58.32  Aligned_cols=107  Identities=15%  Similarity=0.179  Sum_probs=74.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCCCC----CC----CCCeEEEEcCCCChhhHHHHhcCCCEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGL----PS----EGALELVYGDVTDYRSLVDACFGCHVIF   70 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~----~~----~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   70 (334)
                      +||.|+|+ |.+|+.++..|+.++  .++..++..++.....    ..    .+...+ .++ .|   . +.++++|+||
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i-~~~-~d---y-~~~~daDiVV  110 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKI-LAS-TD---Y-AVTAGSDLCI  110 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEE-EeC-CC---H-HHhCCCCEEE
Confidence            38999995 999999999999876  4799999876543211    00    011222 111 12   2 3378999999


Q ss_pred             EeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        71 h~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      -+||............+..|+.-.+.+.+...++..-..+|.+|
T Consensus       111 itAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvt  154 (350)
T PLN02602        111 VTAGARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVS  154 (350)
T ss_pred             ECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            99998544334556788999999999999999984444666666

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.35  E-value=0.00062  Score=60.96  Aligned_cols=100  Identities=22%  Similarity=0.223  Sum_probs=59.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC-CCeEEEE-EcCCCCCCCCCC-CCCeEEE-EcCCCChhhHHHHhcCCCEEEEecccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRAL-VRRTSDISGLPS-EGALELV-YGDVTDYRSLVDACFGCHVIFHTAALV   76 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~-~~~v~~~-~~Dl~d~~~~~~~~~~~d~vih~a~~~   76 (334)
                      |||.|.||||++|..+++.|.+. +.++..+ +++......+.. .+.+... ..++.+. +..+..+++|+|+-+.+..
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~DvVf~alP~~   79 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHPHLRGLVDLNLEPI-DEEEIAEDADVVFLALPHG   79 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCccccccCCceeecC-CHHHhhcCCCEEEECCCch
Confidence            89999999999999999999976 5677744 433322211110 0111111 1112211 2233445799999887531


Q ss_pred             CCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEeccccee
Q 019878           77 EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL  119 (334)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~  119 (334)
                                      ....++..+.+. + +++|-.|+..=+
T Consensus        80 ----------------~s~~~~~~~~~~-G-~~VIDlS~~fR~  104 (346)
T TIGR01850        80 ----------------VSAELAPELLAA-G-VKVIDLSADFRL  104 (346)
T ss_pred             ----------------HHHHHHHHHHhC-C-CEEEeCChhhhc
Confidence                            235666666665 3 689999976543

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=97.35  E-value=0.0042  Score=51.01  Aligned_cols=103  Identities=20%  Similarity=0.282  Sum_probs=64.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCC--------------------------C--CeEEEEcC
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSE--------------------------G--ALELVYGD   52 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~--------------------------~--~v~~~~~D   52 (334)
                      +|+|.|++| +|+++++.|...| .++++++.+.-...++..+                          +  +++.+..+
T Consensus        21 ~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~~~~~   99 (198)
T cd01485          21 KVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSIVEED   99 (198)
T ss_pred             cEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEEEecc
Confidence            699999666 9999999999999 5688888764322222110                          1  23333334


Q ss_pred             CCC-hhhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccC
Q 019878           53 VTD-YRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST  122 (334)
Q Consensus        53 l~d-~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~  122 (334)
                      +.+ .+...+.+.++|+||.+-.               +......+-+.|+++ + ..+|+.++.+.||..
T Consensus       100 ~~~~~~~~~~~~~~~dvVi~~~d---------------~~~~~~~ln~~c~~~-~-ip~i~~~~~G~~G~v  153 (198)
T cd01485         100 SLSNDSNIEEYLQKFTLVIATEE---------------NYERTAKVNDVCRKH-H-IPFISCATYGLIGYA  153 (198)
T ss_pred             cccchhhHHHHHhCCCEEEECCC---------------CHHHHHHHHHHHHHc-C-CCEEEEEeecCEEEE
Confidence            432 2334455667777775521               233445667888887 3 388888887777753

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=97.35  E-value=0.018  Score=44.51  Aligned_cols=193  Identities=17%  Similarity=0.174  Sum_probs=105.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCCh-------hhHHHHh--cCCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY-------RSLVDAC--FGCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~-------~~~~~~~--~~~d~vih~   72 (334)
                      ||+|-||-|-+|+++++.+..++|-|.-++.++.....     .-..+.+|-.=.       +.+.+.+  +++|.|+..
T Consensus         5 rVivYGGkGALGSacv~~FkannywV~siDl~eNe~Ad-----~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~CV   79 (236)
T KOG4022|consen    5 RVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQAD-----SSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVFCV   79 (236)
T ss_pred             eEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccccc-----ceEEecCCcchhHHHHHHHHHHHHhhcccccceEEEe
Confidence            69999999999999999999999999988887653321     112233322111       1222233  349999999


Q ss_pred             ccccC-CCC------CCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecc-cceeccCCCccCCCCCccccccccChHHH
Q 019878           73 AALVE-PWL------PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS-FFALGSTDGYIADENQVHEEKYFCTQYER  144 (334)
Q Consensus        73 a~~~~-~~~------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss-~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (334)
                      ||-.. .+.      .+.+.+++..+....--...+.++-...-++.+.. -...+++++-              -.||.
T Consensus        80 AGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gTPgM--------------IGYGM  145 (236)
T KOG4022|consen   80 AGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGTPGM--------------IGYGM  145 (236)
T ss_pred             eccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCCCcc--------------cchhH
Confidence            97422 111      23333443333322222233333322223444433 3334444332              34999


Q ss_pred             HHHHHHHHHHHHhh--cCCC----EEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHH
Q 019878          145 SKAVADKIALQAAS--EGLP----IVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGH  218 (334)
Q Consensus       145 sK~~~E~~~~~~~~--~g~~----~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  218 (334)
                      .|.+..++.+.+..  .|+|    +..+-|-..--|..               ++.+|.     -..-+|....-+++.+
T Consensus       146 AKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMN---------------RKwMP~-----ADfssWTPL~fi~e~f  205 (236)
T KOG4022|consen  146 AKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMN---------------RKWMPN-----ADFSSWTPLSFISEHF  205 (236)
T ss_pred             HHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccc---------------cccCCC-----CcccCcccHHHHHHHH
Confidence            99999999998763  4665    22233332222211               111221     1233677788888887


Q ss_pred             HHHhhc---CCCCCeEEe
Q 019878          219 IAAMEK---GRSGERYLL  233 (334)
Q Consensus       219 ~~~~~~---~~~g~~~~i  233 (334)
                      +.-...   |..|....+
T Consensus       206 lkWtt~~~RPssGsLlqi  223 (236)
T KOG4022|consen  206 LKWTTETSRPSSGSLLQI  223 (236)
T ss_pred             HHHhccCCCCCCCceEEE
Confidence            766543   345666666

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.33  E-value=0.00066  Score=50.50  Aligned_cols=95  Identities=23%  Similarity=0.307  Sum_probs=65.9

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHH-hcCCCEEEEeccccCCCCC
Q 019878            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTAALVEPWLP   81 (334)
Q Consensus         3 ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vih~a~~~~~~~~   81 (334)
                      |+|.| .|-+|..+++.|.+.+.+|+++++++.....+... ++.++.||.+|.+.+.++ +++++.|+-+..       
T Consensus         1 vvI~G-~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~-~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~-------   71 (116)
T PF02254_consen    1 VVIIG-YGRIGREIAEQLKEGGIDVVVIDRDPERVEELREE-GVEVIYGDATDPEVLERAGIEKADAVVILTD-------   71 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT-TSEEEES-TTSHHHHHHTTGGCESEEEEESS-------
T ss_pred             eEEEc-CCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc-ccccccccchhhhHHhhcCccccCEEEEccC-------
Confidence            57888 57999999999999777999999998654433332 589999999999998886 466888886653       


Q ss_pred             CcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           82 DPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        82 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                              |-.....++..+++.....+++...
T Consensus        72 --------~d~~n~~~~~~~r~~~~~~~ii~~~   96 (116)
T PF02254_consen   72 --------DDEENLLIALLARELNPDIRIIARV   96 (116)
T ss_dssp             --------SHHHHHHHHHHHHHHTTTSEEEEEE
T ss_pred             --------CHHHHHHHHHHHHHHCCCCeEEEEE
Confidence                    1122335556666654444555433

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=97.31  E-value=0.0012  Score=59.49  Aligned_cols=107  Identities=13%  Similarity=0.114  Sum_probs=72.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-e----EEE--E--EcCCCCCCCCC---------CCCCeEEEEcCCCChhhHHHHh
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-S----VRA--L--VRRTSDISGLP---------SEGALELVYGDVTDYRSLVDAC   63 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~----V~~--~--~r~~~~~~~~~---------~~~~v~~~~~Dl~d~~~~~~~~   63 (334)
                      ||.|+|++|.+|++++-.|...+. +    |.+  +  ++..+......         ...++.+..+       ..+.+
T Consensus        46 KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~-------~y~~~  118 (387)
T TIGR01757        46 NVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGID-------PYEVF  118 (387)
T ss_pred             EEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecC-------CHHHh
Confidence            799999999999999999998762 2    333  3  55554332110         0011221111       14567


Q ss_pred             cCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecc
Q 019878           64 FGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSS  115 (334)
Q Consensus        64 ~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss  115 (334)
                      +++|+||-+||............+..|+...+.+.....++. .-.++|.+|.
T Consensus       119 kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsN  171 (387)
T TIGR01757       119 EDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGN  171 (387)
T ss_pred             CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            899999999998654445566788999999999999999953 3346776663

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.31  E-value=0.00097  Score=59.51  Aligned_cols=92  Identities=17%  Similarity=0.223  Sum_probs=58.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEE---EEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVR---ALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~---~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~   78 (334)
                      +|+|.||||++|..|++.|.+++|.+.   .+.+.......+.. .+......|+.     ...+.++|+|+-+++..  
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~~-~~~~~~~~~~~-----~~~~~~~D~v~~a~g~~--   72 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVTF-KGKELEVNEAK-----IESFEGIDIALFSAGGS--   72 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeeee-CCeeEEEEeCC-----hHHhcCCCEEEECCCHH--
Confidence            689999999999999999999877644   44455443333322 13445555653     22347899999988741  


Q ss_pred             CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccc
Q 019878           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF  117 (334)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~  117 (334)
                                    .+..++..+.+. ++ ++|=.|+..
T Consensus        73 --------------~s~~~a~~~~~~-G~-~VID~ss~~   95 (339)
T TIGR01296        73 --------------VSKEFAPKAAKC-GA-IVIDNTSAF   95 (339)
T ss_pred             --------------HHHHHHHHHHHC-CC-EEEECCHHH
Confidence                          123445555554 43 677667643

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.30  E-value=0.00041  Score=69.83  Aligned_cols=73  Identities=21%  Similarity=0.118  Sum_probs=56.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-Ce-------------EEEEEcCCCCCCCCCC-CCCeEEEEcCCCChhhHHHHhcCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HS-------------VRALVRRTSDISGLPS-EGALELVYGDVTDYRSLVDACFGC   66 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~-------------V~~~~r~~~~~~~~~~-~~~v~~~~~Dl~d~~~~~~~~~~~   66 (334)
                      +|+|.| +|++|+..++.|++.. .+             |.+.+++......+.. .++++.+..|+.|.+++.++++++
T Consensus       571 rIlVLG-AG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v~~~  649 (1042)
T PLN02819        571 NVLILG-AGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYVSQV  649 (1042)
T ss_pred             cEEEEC-CCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhhcCC
Confidence            699999 5999999999998753 33             7777776554433222 126778999999999999999999


Q ss_pred             CEEEEeccc
Q 019878           67 HVIFHTAAL   75 (334)
Q Consensus        67 d~vih~a~~   75 (334)
                      |+||++...
T Consensus       650 DaVIsalP~  658 (1042)
T PLN02819        650 DVVISLLPA  658 (1042)
T ss_pred             CEEEECCCc
Confidence            999999864

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.30  E-value=0.00098  Score=59.67  Aligned_cols=99  Identities=25%  Similarity=0.241  Sum_probs=59.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC-CCeEEEEEcCCCCCCCCCCC-CCeEEE-EcCCCChhhHHHHhcCCCEEEEeccccC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSE-GALELV-YGDVTDYRSLVDACFGCHVIFHTAALVE   77 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~-~~v~~~-~~Dl~d~~~~~~~~~~~d~vih~a~~~~   77 (334)
                      |||+|.||||++|+.+++.|.+. +.+++++.++......+... +.+... ..++.+.+..  ..+++|+|+-+...  
T Consensus         3 ~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~--~~~~vD~Vf~alP~--   78 (343)
T PRK00436          3 IKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHPHLRGLVDLVLEPLDPE--ILAGADVVFLALPH--   78 (343)
T ss_pred             eEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCcccccccCceeecCCHH--HhcCCCEEEECCCc--
Confidence            57999999999999999999976 57887776643322222110 111111 1233333332  44679999877642  


Q ss_pred             CCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEeccccee
Q 019878           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL  119 (334)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~  119 (334)
                                    .....++..+.+.  .+++|=.|+..-+
T Consensus        79 --------------~~~~~~v~~a~~a--G~~VID~S~~fR~  104 (343)
T PRK00436         79 --------------GVSMDLAPQLLEA--GVKVIDLSADFRL  104 (343)
T ss_pred             --------------HHHHHHHHHHHhC--CCEEEECCcccCC
Confidence                          1124556666654  2588888876544

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=97.30  E-value=0.0045  Score=54.81  Aligned_cols=108  Identities=17%  Similarity=0.182  Sum_probs=73.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCC--CCC------CC-CCeEEEEcCCCChhhHHHHhcCCCEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDIS--GLP------SE-GALELVYGDVTDYRSLVDACFGCHVIF   70 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~--~~~------~~-~~v~~~~~Dl~d~~~~~~~~~~~d~vi   70 (334)
                      +||.|.| +|.+|+.++..|+..|. +|++++++++...  .+.      .. ...++...  .|   + +.++++|+||
T Consensus         7 ~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~--~d---~-~~l~~aDiVI   79 (321)
T PTZ00082          7 RKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGT--NN---Y-EDIAGSDVVI   79 (321)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEEC--CC---H-HHhCCCCEEE
Confidence            4799999 69999999999998884 8999998876431  010      00 01222210  12   2 3678999999


Q ss_pred             EeccccCCCCC-----CcccchhhhhHHHHHHHHHHHhcCCCcEEEEecc
Q 019878           71 HTAALVEPWLP-----DPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (334)
Q Consensus        71 h~a~~~~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss  115 (334)
                      .+|+.......     +....+..|+...+.+++.+.+...-..++.+|-
T Consensus        80 ~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sN  129 (321)
T PTZ00082         80 VTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITN  129 (321)
T ss_pred             ECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            99987433222     3345678899999999999998843336777774

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=97.27  E-value=0.00082  Score=59.03  Aligned_cols=105  Identities=18%  Similarity=0.190  Sum_probs=73.1

Q ss_pred             EEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCCCCCC----C----CCeEEEEcCCCChhhHHHHhcCCCEEEEe
Q 019878            3 ILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLPS----E----GALELVYGDVTDYRSLVDACFGCHVIFHT   72 (334)
Q Consensus         3 ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~----~----~~v~~~~~Dl~d~~~~~~~~~~~d~vih~   72 (334)
                      |.|.| +|.+|+.++..|+.+|  .++++++++++.......    .    ...+...+  .|    .+.++++|+||.+
T Consensus         1 i~iiG-aG~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~----~~~l~~aDiVIit   73 (300)
T cd00300           1 ITIIG-AGNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GD----YADAADADIVVIT   73 (300)
T ss_pred             CEEEC-CCHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CC----HHHhCCCCEEEEc
Confidence            46788 5889999999999888  789999997764321110    0    01122211  11    3477899999999


Q ss_pred             ccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           73 AALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        73 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      ||.......+....+..|+...+.+.+.+.++..-..++.+|
T Consensus        74 ag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~s  115 (300)
T cd00300          74 AGAPRKPGETRLDLINRNAPILRSVITNLKKYGPDAIILVVS  115 (300)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            997544334556778899999999999999985334566666

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.25  E-value=0.00045  Score=64.52  Aligned_cols=68  Identities=26%  Similarity=0.332  Sum_probs=51.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC-C----CCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-I----SGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~----~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      ++|+|+|+++ +|..+++.|+++|++|++.+++... .    ..+.. .+++++.+|..+     +...++|+||++++.
T Consensus         6 k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~-~~~~~~~~~~~~-----~~~~~~d~vv~~~g~   78 (450)
T PRK14106          6 KKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGE-LGIELVLGEYPE-----EFLEGVDLVVVSPGV   78 (450)
T ss_pred             CEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh-cCCEEEeCCcch-----hHhhcCCEEEECCCC
Confidence            3699999877 9999999999999999999987522 1    11221 257788888766     345679999999986

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.25  E-value=0.00097  Score=62.33  Aligned_cols=72  Identities=24%  Similarity=0.306  Sum_probs=57.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC-CCeEEEEcCCCChhhHHHH-hcCCCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-GALELVYGDVTDYRSLVDA-CFGCHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~v~~~~~Dl~d~~~~~~~-~~~~d~vih~a   73 (334)
                      ++|+|.|+ |.+|+.+++.|.+.|++|++++++++....+... .++.++.||.++.+.+.++ ++++|+||-+.
T Consensus       232 ~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~  305 (453)
T PRK09496        232 KRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIALT  305 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEECC
Confidence            46999995 9999999999999999999999987654433221 2578899999999888655 46799988554

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=97.24  E-value=0.0019  Score=55.42  Aligned_cols=66  Identities=24%  Similarity=0.219  Sum_probs=45.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC-CCeEEEE-EcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRAL-VRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |||.|+|++|.+|+.+++.+.+. +.++.++ +++++.....        -..++...+++.++++++|+||+++.
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~--------~~~~i~~~~dl~~ll~~~DvVid~t~   69 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ--------GALGVAITDDLEAVLADADVLIDFTT   69 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc--------CCCCccccCCHHHhccCCCEEEECCC
Confidence            79999999999999999999864 5777765 4444332221        11233334556666778999999874

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.24  E-value=0.0041  Score=52.37  Aligned_cols=101  Identities=16%  Similarity=0.203  Sum_probs=65.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCC------------------------C--CeEEEEcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSE------------------------G--ALELVYGDVT   54 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~------------------------~--~v~~~~~Dl~   54 (334)
                      +|+|.| .|.+|+++++.|...|. +++++|.+.-...++..+                        +  +++.+..++ 
T Consensus        23 ~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~~i-  100 (228)
T cd00757          23 RVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNERL-  100 (228)
T ss_pred             cEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEeccee-
Confidence            699999 89999999999999994 677776654322222111                        1  344454444 


Q ss_pred             ChhhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceecc
Q 019878           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS  121 (334)
Q Consensus        55 d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~  121 (334)
                      +.+.+.+.++++|+||.+..               |...-..+-+.|.++ + ..+|+.+..+.+|.
T Consensus       101 ~~~~~~~~~~~~DvVi~~~d---------------~~~~r~~l~~~~~~~-~-ip~i~~g~~g~~g~  150 (228)
T cd00757         101 DAENAEELIAGYDLVLDCTD---------------NFATRYLINDACVKL-G-KPLVSGAVLGFEGQ  150 (228)
T ss_pred             CHHHHHHHHhCCCEEEEcCC---------------CHHHHHHHHHHHHHc-C-CCEEEEEeccCEEE
Confidence            34556677788999998764               122234566777776 3 47888876665553

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=97.23  E-value=0.0028  Score=56.56  Aligned_cols=95  Identities=18%  Similarity=0.210  Sum_probs=55.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC---eEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH---SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVE   77 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~   77 (334)
                      |||.|.||||++|..|++.|.+++|   ++..+.........+... +......++.     ...++++|+||-+++.. 
T Consensus         8 ~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~~-~~~~~v~~~~-----~~~~~~~D~vf~a~p~~-   80 (344)
T PLN02383          8 PSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTFE-GRDYTVEELT-----EDSFDGVDIALFSAGGS-   80 (344)
T ss_pred             CeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeeec-CceeEEEeCC-----HHHHcCCCEEEECCCcH-
Confidence            6899999999999999999998776   343333322211111111 2222222322     12346899999887631 


Q ss_pred             CCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEeccccee
Q 019878           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL  119 (334)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~  119 (334)
                                     .+..+...+.+. + .++|=.|+..=+
T Consensus        81 ---------------~s~~~~~~~~~~-g-~~VIDlS~~fR~  105 (344)
T PLN02383         81 ---------------ISKKFGPIAVDK-G-AVVVDNSSAFRM  105 (344)
T ss_pred             ---------------HHHHHHHHHHhC-C-CEEEECCchhhc
Confidence                           123444445444 2 478888876533

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.22  E-value=0.0015  Score=49.08  Aligned_cols=92  Identities=22%  Similarity=0.296  Sum_probs=53.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCC-CCCCCCCC----CCe-EEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTS-DISGLPSE----GAL-ELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~-~~~~~~~~----~~v-~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      ||.|.|+||++|+.|++.|.+.. .++..+..+.. ....+...    ... ....-+ .+    .+.+.++|+|+.|.+
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~Dvvf~a~~   75 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED-AD----PEELSDVDVVFLALP   75 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE-TS----GHHHTTESEEEE-SC
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee-cc----hhHhhcCCEEEecCc
Confidence            68999999999999999999853 55555444433 22221111    011 111111 22    233478999999875


Q ss_pred             ccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEeccc
Q 019878           75 LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF  116 (334)
Q Consensus        75 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~  116 (334)
                      .                .....+...+.+. ++ ++|=.|+.
T Consensus        76 ~----------------~~~~~~~~~~~~~-g~-~ViD~s~~   99 (121)
T PF01118_consen   76 H----------------GASKELAPKLLKA-GI-KVIDLSGD   99 (121)
T ss_dssp             H----------------HHHHHHHHHHHHT-TS-EEEESSST
T ss_pred             h----------------hHHHHHHHHHhhC-Cc-EEEeCCHH
Confidence            3                1224556666665 33 77777764

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=97.22  E-value=0.0068  Score=51.33  Aligned_cols=101  Identities=17%  Similarity=0.207  Sum_probs=63.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCC------------------------CC--eEEEEcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSE------------------------GA--LELVYGDVT   54 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~------------------------~~--v~~~~~Dl~   54 (334)
                      +|+|.| .|.+|+.+++.|...| -+++++|.+.-...++..+                        +.  ++.+...+ 
T Consensus        26 ~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~i-  103 (240)
T TIGR02355        26 RVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAKL-  103 (240)
T ss_pred             cEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEeccC-
Confidence            689998 8999999999999998 5788888765544433321                        12  23332222 


Q ss_pred             ChhhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceecc
Q 019878           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS  121 (334)
Q Consensus        55 d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~  121 (334)
                      +.+.+.+.++++|+||.+.-               |...-..+-++|.++ + ..+|+.++...+|.
T Consensus       104 ~~~~~~~~~~~~DlVvd~~D---------------~~~~r~~ln~~~~~~-~-ip~v~~~~~g~~G~  153 (240)
T TIGR02355       104 DDAELAALIAEHDIVVDCTD---------------NVEVRNQLNRQCFAA-K-VPLVSGAAIRMEGQ  153 (240)
T ss_pred             CHHHHHHHhhcCCEEEEcCC---------------CHHHHHHHHHHHHHc-C-CCEEEEEecccEeE
Confidence            22445566677777777642               233334566777776 3 47787776655553

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.20  E-value=0.0039  Score=51.40  Aligned_cols=101  Identities=16%  Similarity=0.145  Sum_probs=65.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCC------------------------CC--eEEEEcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSE------------------------GA--LELVYGDVT   54 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~------------------------~~--v~~~~~Dl~   54 (334)
                      +|+|.| .|.+|+.+++.|...|. ++++++.+.-...++..+                        +.  ++.+..++ 
T Consensus        23 ~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~i-  100 (202)
T TIGR02356        23 HVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKERV-  100 (202)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhcC-
Confidence            689999 89999999999999995 888888874322222110                        12  33333333 


Q ss_pred             ChhhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceecc
Q 019878           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS  121 (334)
Q Consensus        55 d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~  121 (334)
                      +.+.+.+.++++|+||.+..               |...-..+.+.|+++ + ..+|+.++.+.+|.
T Consensus       101 ~~~~~~~~~~~~D~Vi~~~d---------------~~~~r~~l~~~~~~~-~-ip~i~~~~~g~~G~  150 (202)
T TIGR02356       101 TAENLELLINNVDLVLDCTD---------------NFATRYLINDACVAL-G-TPLISAAVVGFGGQ  150 (202)
T ss_pred             CHHHHHHHHhCCCEEEECCC---------------CHHHHHHHHHHHHHc-C-CCEEEEEeccCeEE
Confidence            33456677888999987753               222334566777776 3 47888887666653

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=97.16  E-value=0.0089  Score=46.27  Aligned_cols=100  Identities=20%  Similarity=0.268  Sum_probs=63.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCC------------------------CC--eEEEEcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSE------------------------GA--LELVYGDVT   54 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~------------------------~~--v~~~~~Dl~   54 (334)
                      ||+|.| .|.+|+.+++.|...|. ++.+++.+.-...++..+                        +.  ++.+..++.
T Consensus         1 ~VliiG-~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVG-LGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            689999 59999999999999996 688887764333222111                        12  333333333


Q ss_pred             ChhhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceec
Q 019878           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG  120 (334)
Q Consensus        55 d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~  120 (334)
                      +. ...+.+.++|+||.+..               |......+.+.|+++ + ..+|..++...+|
T Consensus        80 ~~-~~~~~~~~~diVi~~~d---------------~~~~~~~l~~~~~~~-~-i~~i~~~~~g~~g  127 (143)
T cd01483          80 ED-NLDDFLDGVDLVIDAID---------------NIAVRRALNRACKEL-G-IPVIDAGGLGLGG  127 (143)
T ss_pred             hh-hHHHHhcCCCEEEECCC---------------CHHHHHHHHHHHHHc-C-CCEEEEcCCCcEE
Confidence            32 23455677888887753               233446677888887 3 4788777765444

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=97.15  E-value=0.0058  Score=53.55  Aligned_cols=102  Identities=21%  Similarity=0.253  Sum_probs=67.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCC------------------------C--CeEEEEcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSE------------------------G--ALELVYGDVT   54 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~------------------------~--~v~~~~~Dl~   54 (334)
                      ||||.| .|.+|..+++.|+..| .+++++|.+.-...++..+                        +  +++.+..++.
T Consensus         1 kVlIVG-aGGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~   79 (312)
T cd01489           1 KVLVVG-AGGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK   79 (312)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence            689999 6999999999999998 5778877765433333221                        1  3445555665


Q ss_pred             ChhhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceecc
Q 019878           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS  121 (334)
Q Consensus        55 d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~  121 (334)
                      +.....+.++++|+||.+.               .|...-..+-+.|..+ + ..||..++.+.+|.
T Consensus        80 ~~~~~~~f~~~~DvVv~a~---------------Dn~~ar~~in~~c~~~-~-ip~I~~gt~G~~G~  129 (312)
T cd01489          80 DPDFNVEFFKQFDLVFNAL---------------DNLAARRHVNKMCLAA-D-VPLIESGTTGFLGQ  129 (312)
T ss_pred             CccchHHHHhcCCEEEECC---------------CCHHHHHHHHHHHHHC-C-CCEEEEecCcceeE
Confidence            5433445667778777664               2344445666777776 3 47888888777664

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>cd05295 MDH_like Malate dehydrogenase-like

Probab=97.14  E-value=0.0017  Score=59.59  Aligned_cols=106  Identities=19%  Similarity=0.122  Sum_probs=70.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhC---C----CeEEEEEcC--CCCCCCC---------CCCCCeEEEEcCCCChhhHHHHh
Q 019878            2 KILVSGASGYLGGRLCHALLKQ---G----HSVRALVRR--TSDISGL---------PSEGALELVYGDVTDYRSLVDAC   63 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~---g----~~V~~~~r~--~~~~~~~---------~~~~~v~~~~~Dl~d~~~~~~~~   63 (334)
                      +|+||||+|+||.+|+-.|++-   |    ..++.++..  .+.....         +...++....       ...+.+
T Consensus       125 ~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~~-------~~~ea~  197 (452)
T cd05295         125 QVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVTT-------DLDVAF  197 (452)
T ss_pred             EEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEEE-------CCHHHh
Confidence            5999999999999999999862   3    235555653  2211100         0001222221       125678


Q ss_pred             cCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCC--CcEEEEec
Q 019878           64 FGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTS  114 (334)
Q Consensus        64 ~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~v~~S  114 (334)
                      +++|+||-+||............++.|....+.+.++..++..  ++-+|..|
T Consensus       198 ~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t  250 (452)
T cd05295         198 KDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR  250 (452)
T ss_pred             CCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence            8999999999985544455667889999999999999999844  33444443

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=97.14  E-value=0.0013  Score=60.49  Aligned_cols=73  Identities=26%  Similarity=0.299  Sum_probs=50.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEE-------------cCCCChhhHHHHhcCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVY-------------GDVTDYRSLVDACFGCH   67 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~-------------~Dl~d~~~~~~~~~~~d   67 (334)
                      |+|.|.| +|++|..++..|++.|++|+++++++.+.+.+... ...+..             +.+.-..+..++++++|
T Consensus         1 mkI~vIG-lG~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g-~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~ad   78 (411)
T TIGR03026         1 MKIAVIG-LGYVGLPLAALLADLGHEVTGVDIDQEKVDKLNKG-KSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDAD   78 (411)
T ss_pred             CEEEEEC-CCchhHHHHHHHHhcCCeEEEEECCHHHHHHhhcC-CCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCC
Confidence            8999998 89999999999999999999999987765443321 000000             11111223455677899


Q ss_pred             EEEEeccc
Q 019878           68 VIFHTAAL   75 (334)
Q Consensus        68 ~vih~a~~   75 (334)
                      +||-+.+.
T Consensus        79 vvii~vpt   86 (411)
T TIGR03026        79 VIIICVPT   86 (411)
T ss_pred             EEEEEeCC
Confidence            99988764

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=97.13  E-value=0.0081  Score=49.26  Aligned_cols=101  Identities=21%  Similarity=0.253  Sum_probs=62.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCC------------------------C--CeEEEEcCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSE------------------------G--ALELVYGDV   53 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~------------------------~--~v~~~~~Dl   53 (334)
                      .+|+|.|+.| +|+++++.|...|. +++++|.+.-...++..+                        +  .++.+...+
T Consensus        22 s~VlIiG~gg-lG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~~~~  100 (197)
T cd01492          22 ARILLIGLKG-LGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDTDDI  100 (197)
T ss_pred             CcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEecCc
Confidence            3699998555 99999999999994 688887664322222211                        1  233333333


Q ss_pred             CChhhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceecc
Q 019878           54 TDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS  121 (334)
Q Consensus        54 ~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~  121 (334)
                      .+  ...+.++++|+||.+..               |......+-+.|++. ++ .+|+.++.+.+|.
T Consensus       101 ~~--~~~~~~~~~dvVi~~~~---------------~~~~~~~ln~~c~~~-~i-p~i~~~~~G~~G~  149 (197)
T cd01492         101 SE--KPEEFFSQFDVVVATEL---------------SRAELVKINELCRKL-GV-KFYATGVHGLFGF  149 (197)
T ss_pred             cc--cHHHHHhCCCEEEECCC---------------CHHHHHHHHHHHHHc-CC-CEEEEEecCCEEE
Confidence            31  23445567787775532               233345566788887 43 7888888776664

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=97.13  E-value=0.001  Score=66.07  Aligned_cols=155  Identities=17%  Similarity=0.203  Sum_probs=100.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCe-EEEEEcCCCCCCCCCC-------CCCeEE--EEcCCCChhhHHHHhcC------
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHS-VRALVRRTSDISGLPS-------EGALEL--VYGDVTDYRSLVDACFG------   65 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~-------~~~v~~--~~~Dl~d~~~~~~~~~~------   65 (334)
                      +.+|+||-|..|-.|++.|.++|.+ ++..+|+.-+.. +..       ..++++  -..|++..+.-..+++.      
T Consensus      1770 sYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtG-YQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl~~ 1848 (2376)
T KOG1202|consen 1770 SYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTG-YQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKLGP 1848 (2376)
T ss_pred             eEEEeccccchhHHHHHHHHhcCceEEEEeccccchhh-HHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhccc
Confidence            4789999999999999999999965 555566543211 100       013333  33455555555555543      


Q ss_pred             CCEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc-CCCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           66 CHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET-KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        66 ~d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      +--|+|+|+....      ..++....-+.-+.+|.+|=...++. ...+.||.+||.+.-..+.+.             
T Consensus      1849 vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~GQ------------- 1915 (2376)
T KOG1202|consen 1849 VGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNAGQ------------- 1915 (2376)
T ss_pred             ccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCCcc-------------
Confidence            6889999987432      11222333344556667766666654 124689999997654433332             


Q ss_pred             cChHHHHHHHHHHHHHHHhhcCCCEEEEecCce
Q 019878          139 CTQYERSKAVADKIALQAASEGLPIVPVYPGVI  171 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~~~g~~~~ilR~~~v  171 (334)
                       +.||.+-.+.|+++.+-..+|+|-+.+.-|.|
T Consensus      1916 -tNYG~aNS~MERiceqRr~~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1916 -TNYGLANSAMERICEQRRHEGFPGTAIQWGAI 1947 (2376)
T ss_pred             -cccchhhHHHHHHHHHhhhcCCCcceeeeecc
Confidence             66999999999999987777988887776654

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=97.11  E-value=0.015  Score=54.48  Aligned_cols=157  Identities=21%  Similarity=0.172  Sum_probs=96.7

Q ss_pred             EEEEcCC-ChhhHHHHHHHHhCCCeEEEEEcCCCCC--CCC-------CCC-CCeEEEEcCCCChhhHHHHhc-------
Q 019878            3 ILVSGAS-GYLGGRLCHALLKQGHSVRALVRRTSDI--SGL-------PSE-GALELVYGDVTDYRSLVDACF-------   64 (334)
Q Consensus         3 ilItG~t-G~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~-------~~~-~~v~~~~~Dl~d~~~~~~~~~-------   64 (334)
                      .||||++ |-||.++++.|++.|.+|++...+-++.  +.+       ... ...-++..+..++.++..+++       
T Consensus       399 alVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg~eq~  478 (866)
T COG4982         399 ALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIGDEQT  478 (866)
T ss_pred             EEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhccccc
Confidence            6899876 7899999999999999999886543321  000       000 134556677766655555442       


Q ss_pred             --------------CCCEEEEecccc-CCC----CCCcccchhhhhHHHHHHHHHHHhcC---CC---cEEEEeccc--c
Q 019878           65 --------------GCHVIFHTAALV-EPW----LPDPSRFFAVNVEGLKNVVQAAKETK---TV---EKIIYTSSF--F  117 (334)
Q Consensus        65 --------------~~d~vih~a~~~-~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~---~~---~~~v~~Ss~--~  117 (334)
                                    .+|.+|-+|++. ...    ..+.+..+++-+..+++++-..++.+   ++   -++|...|.  +
T Consensus       479 ~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPgSPNrG  558 (866)
T COG4982         479 ETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPGSPNRG  558 (866)
T ss_pred             cccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEecCCCCCC
Confidence                          157888888862 211    12233345555556667666666552   11   245555552  1


Q ss_pred             eeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHhhc-----CCCEEEEecCceecCCC
Q 019878          118 ALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE-----GLPIVPVYPGVIYGPGK  176 (334)
Q Consensus       118 v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----g~~~~ilR~~~v~G~~~  176 (334)
                      .||.                 ...|+.+|...|.++..|...     -+..+--+.|++-|.|-
T Consensus       559 ~FGg-----------------DGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGL  605 (866)
T COG4982         559 MFGG-----------------DGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGL  605 (866)
T ss_pred             ccCC-----------------CcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccc
Confidence            1221                 156999999999999988643     14556667888888764

>PRK08328 hypothetical protein; Provisional

Probab=97.10  E-value=0.0087  Score=50.40  Aligned_cols=102  Identities=20%  Similarity=0.223  Sum_probs=62.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCC-------------------------C--CeEEEEcCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSE-------------------------G--ALELVYGDV   53 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~-------------------------~--~v~~~~~Dl   53 (334)
                      +|+|.| +|.+|+++++.|...| .+++++|.+.-...++..+                         +  .++.+...+
T Consensus        29 ~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~~~~~  107 (231)
T PRK08328         29 KVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETFVGRL  107 (231)
T ss_pred             cEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEEeccC
Confidence            689998 8899999999999999 5677887654333222210                         1  222333333


Q ss_pred             CChhhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccC
Q 019878           54 TDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST  122 (334)
Q Consensus        54 ~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~  122 (334)
                       +.+.+.+.++++|+||.+.-               |...-..+-++|+++ + ..+|+.++.+.+|..
T Consensus       108 -~~~~~~~~l~~~D~Vid~~d---------------~~~~r~~l~~~~~~~-~-ip~i~g~~~g~~G~v  158 (231)
T PRK08328        108 -SEENIDEVLKGVDVIVDCLD---------------NFETRYLLDDYAHKK-G-IPLVHGAVEGTYGQV  158 (231)
T ss_pred             -CHHHHHHHHhcCCEEEECCC---------------CHHHHHHHHHHHHHc-C-CCEEEEeeccCEEEE
Confidence             22334445566666665542               222333455667776 3 478888888777754

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=97.03  E-value=0.00074  Score=56.48  Aligned_cols=37  Identities=32%  Similarity=0.363  Sum_probs=34.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~   37 (334)
                      |||.|+||+|.+|+.+++.|.+.|++|.+.+|++++.
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~   37 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKA   37 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHH
Confidence            8999999999999999999999999999999987543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.02  E-value=0.00028  Score=55.48  Aligned_cols=71  Identities=20%  Similarity=0.168  Sum_probs=47.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      ++|+|+|+ |.+|..+++.|.+.| ++|.+.+|+.++...+...-....+..+..+   ..+.++++|+||++...
T Consensus        20 ~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dvvi~~~~~   91 (155)
T cd01065          20 KKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLD---LEELLAEADLIINTTPV   91 (155)
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecc---hhhccccCCEEEeCcCC
Confidence            46999996 999999999999985 8899999987644332111011111123333   33447889999999875

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK08655 prephenate dehydrogenase; Provisional

Probab=97.00  E-value=0.00071  Score=62.59  Aligned_cols=67  Identities=22%  Similarity=0.283  Sum_probs=48.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |+|+|.||+|.+|+++++.|.+.|++|.+.+|+++.........++.+       .....+.+.++|+||-+..
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~-------~~~~~e~~~~aDvVIlavp   67 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEY-------ANDNIDAAKDADIVIISVP   67 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCee-------ccCHHHHhccCCEEEEecC
Confidence            899999999999999999999999999999998654321111012221       1224456678999997764

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.00  E-value=4.5e-05  Score=58.54  Aligned_cols=68  Identities=19%  Similarity=0.296  Sum_probs=49.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCe-EEEEEcCCCCCCCCCCC---CCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHS-VRALVRRTSDISGLPSE---GALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~---~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      +++|.| +|..|+.++..|.+.|.+ |+++.|+.++...+.+.   ..++++  +   .+++.+.+.++|+||++.+.
T Consensus        14 ~vlviG-aGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~--~---~~~~~~~~~~~DivI~aT~~   85 (135)
T PF01488_consen   14 RVLVIG-AGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAI--P---LEDLEEALQEADIVINATPS   85 (135)
T ss_dssp             EEEEES-SSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEE--E---GGGHCHHHHTESEEEE-SST
T ss_pred             EEEEEC-CHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCcccccee--e---HHHHHHHHhhCCeEEEecCC
Confidence            699999 588999999999999966 99999987654433211   123333  2   34455778889999999875

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.98  E-value=0.011  Score=50.27  Aligned_cols=100  Identities=19%  Similarity=0.254  Sum_probs=63.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCC------------------------C--CeEEEEcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSE------------------------G--ALELVYGDVT   54 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~------------------------~--~v~~~~~Dl~   54 (334)
                      +|+|.|+ |.+|+.+++.|...| .++++++.+.-...++..+                        +  +++.+...++
T Consensus        34 ~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~~i~  112 (245)
T PRK05690         34 RVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINARLD  112 (245)
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            6999995 999999999999998 4777777654332222110                        1  3444444443


Q ss_pred             ChhhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceec
Q 019878           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG  120 (334)
Q Consensus        55 d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~  120 (334)
                       .+...+.+.++|+||.+.-               |...-..+-++|.++ + ..+|+.++...+|
T Consensus       113 -~~~~~~~~~~~DiVi~~~D---------------~~~~r~~ln~~~~~~-~-ip~v~~~~~g~~G  160 (245)
T PRK05690        113 -DDELAALIAGHDLVLDCTD---------------NVATRNQLNRACFAA-K-KPLVSGAAIRMEG  160 (245)
T ss_pred             -HHHHHHHHhcCCEEEecCC---------------CHHHHHHHHHHHHHh-C-CEEEEeeeccCCc
Confidence             3445667788999987752               223334566778776 3 4688766554444

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=96.97  E-value=0.0057  Score=55.51  Aligned_cols=54  Identities=19%  Similarity=0.269  Sum_probs=43.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      |+|.|.||+|.+|+.+++.|.+.|++|++.+|+..                     +...+++.++|+||-+...
T Consensus        99 ~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~~---------------------~~~~~~~~~aDlVilavP~  152 (374)
T PRK11199         99 RPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDDW---------------------DRAEDILADAGMVIVSVPI  152 (374)
T ss_pred             ceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCcc---------------------hhHHHHHhcCCEEEEeCcH
Confidence            57999999999999999999999999999998521                     1234566789999988753

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.96  E-value=0.015  Score=47.71  Aligned_cols=31  Identities=19%  Similarity=0.290  Sum_probs=28.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRR   33 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~   33 (334)
                      +|+|.| .|.+|+.++..|...|. +++++|.+
T Consensus        23 ~V~IvG-~GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        23 TVAICG-LGGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             cEEEEC-cCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            699999 58899999999999997 69999887

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK08223 hypothetical protein; Validated

Probab=96.94  E-value=0.014  Score=50.32  Aligned_cols=102  Identities=10%  Similarity=0.047  Sum_probs=63.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCC------------------------C--CeEEEEcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSE------------------------G--ALELVYGDVT   54 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~------------------------~--~v~~~~~Dl~   54 (334)
                      +|+|.| .|.+|+.++..|+..| -++.++|.+.-...++..+                        +  +++.+...++
T Consensus        29 ~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~~~l~  107 (287)
T PRK08223         29 RVAIAG-LGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFPEGIG  107 (287)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEecccC
Confidence            689998 8899999999999998 5777777765433333221                        2  3444444443


Q ss_pred             ChhhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceec
Q 019878           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG  120 (334)
Q Consensus        55 d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~  120 (334)
                       .+...++++++|+||.+.-       ++      ++..-..+-++|.++ + ..+|+.|.....|
T Consensus       108 -~~n~~~ll~~~DlVvD~~D-------~~------~~~~r~~ln~~c~~~-~-iP~V~~~~~g~~g  157 (287)
T PRK08223        108 -KENADAFLDGVDVYVDGLD-------FF------EFDARRLVFAACQQR-G-IPALTAAPLGMGT  157 (287)
T ss_pred             -ccCHHHHHhCCCEEEECCC-------CC------cHHHHHHHHHHHHHc-C-CCEEEEeccCCeE
Confidence             3345666777888875531       10      122334566778876 3 4778876544443

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.92  E-value=0.015  Score=48.31  Aligned_cols=102  Identities=19%  Similarity=0.299  Sum_probs=62.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCC-----------------------C--CeEEEEcCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSE-----------------------G--ALELVYGDVTD   55 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~-----------------------~--~v~~~~~Dl~d   55 (334)
                      +|+|.| .|.+|+.+++.|...|. +++++|.+.-...++..+                       +  +++.+...+++
T Consensus        30 ~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~~i~~  108 (212)
T PRK08644         30 KVGIAG-AGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNEKIDE  108 (212)
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEeeecCH
Confidence            689999 79999999999999995 588888874333333221                       1  23333333332


Q ss_pred             hhhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceecc
Q 019878           56 YRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS  121 (334)
Q Consensus        56 ~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~  121 (334)
                       +.+.+.++++|+||.+.               .|...-..+.+.|.+.. -..+|+.+...-|+.
T Consensus       109 -~~~~~~~~~~DvVI~a~---------------D~~~~r~~l~~~~~~~~-~~p~I~~~~~~~~~~  157 (212)
T PRK08644        109 -DNIEELFKDCDIVVEAF---------------DNAETKAMLVETVLEHP-GKKLVAASGMAGYGD  157 (212)
T ss_pred             -HHHHHHHcCCCEEEECC---------------CCHHHHHHHHHHHHHhC-CCCEEEeehhhccCC
Confidence             33445566677777663               13333456667777762 247887766555554

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.91  E-value=0.012  Score=52.90  Aligned_cols=100  Identities=20%  Similarity=0.188  Sum_probs=65.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCC------------------------C--CeEEEEcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSE------------------------G--ALELVYGDVT   54 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~------------------------~--~v~~~~~Dl~   54 (334)
                      +|||.| .|.+|+.+++.|...| -++++++.+.-...++..+                        +  +++.+...++
T Consensus        30 ~VlivG-~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~~~i~  108 (355)
T PRK05597         30 KVAVIG-AGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSVRRLT  108 (355)
T ss_pred             eEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEEeecC
Confidence            699998 6999999999999998 4788888765333222221                        2  3444444444


Q ss_pred             ChhhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceec
Q 019878           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG  120 (334)
Q Consensus        55 d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~  120 (334)
                       .+...+.++++|+||.+.-               |...-..+-++|.+. + ..+|+.++.+.+|
T Consensus       109 -~~~~~~~~~~~DvVvd~~d---------------~~~~r~~~n~~c~~~-~-ip~v~~~~~g~~g  156 (355)
T PRK05597        109 -WSNALDELRDADVILDGSD---------------NFDTRHLASWAAARL-G-IPHVWASILGFDA  156 (355)
T ss_pred             -HHHHHHHHhCCCEEEECCC---------------CHHHHHHHHHHHHHc-C-CCEEEEEEecCeE
Confidence             3445667788999998753               222333456777776 3 4688887655555

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.90  E-value=0.015  Score=46.63  Aligned_cols=102  Identities=17%  Similarity=0.291  Sum_probs=62.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCC-----------------------C--CeEEEEcCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSE-----------------------G--ALELVYGDVTD   55 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~-----------------------~--~v~~~~~Dl~d   55 (334)
                      ||+|.| .|.+|+.+++.|...|. +++++|.+.-...++..+                       +  +++.+...+.+
T Consensus         1 ~VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~   79 (174)
T cd01487           1 KVGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE   79 (174)
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence            689999 79999999999999996 588888875222222211                       1  23334333333


Q ss_pred             hhhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceecc
Q 019878           56 YRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS  121 (334)
Q Consensus        56 ~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~  121 (334)
                       +.+.+.++++|+||.+..               |...-..+.+.+.+..+ ..+|+.+....|+.
T Consensus        80 -~~~~~~l~~~DlVi~~~d---------------~~~~r~~i~~~~~~~~~-ip~i~~~~~~~~~~  128 (174)
T cd01487          80 -NNLEGLFGDCDIVVEAFD---------------NAETKAMLAESLLGNKN-KPVVCASGMAGFGD  128 (174)
T ss_pred             -hhHHHHhcCCCEEEECCC---------------CHHHHHHHHHHHHHHCC-CCEEEEehhhccCC
Confidence             445566777888887632               22333456677766522 46777665555554

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.88  E-value=0.003  Score=56.78  Aligned_cols=35  Identities=29%  Similarity=0.464  Sum_probs=29.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTS   35 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~   35 (334)
                      |||+|+||||++|+.|++.|.+.. .++.++.++..
T Consensus         4 ~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~   39 (349)
T PRK08664          4 LKVGILGATGMVGQRFVQLLANHPWFEVTALAASER   39 (349)
T ss_pred             cEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChh
Confidence            479999999999999999999765 48888755543

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.87  E-value=0.00095  Score=54.20  Aligned_cols=68  Identities=22%  Similarity=0.137  Sum_probs=44.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC-CCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-LPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |++...||+|.||+.|++.|...||+|++.+|+.++... ........      -...+...+.+..|+|+-...
T Consensus         1 m~~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~------i~~~~~~dA~~~aDVVvLAVP   69 (211)
T COG2085           1 MMIIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPL------ITGGSNEDAAALADVVVLAVP   69 (211)
T ss_pred             CcEEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccc------cccCChHHHHhcCCEEEEecc
Confidence            666677779999999999999999999999776654221 11100011      112234556677898886653

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=96.86  E-value=0.0021  Score=58.44  Aligned_cols=109  Identities=19%  Similarity=0.188  Sum_probs=59.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC------CCeEE----EEcCCCChhhHHHHhcCCCEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE------GALEL----VYGDVTDYRSLVDACFGCHVIF   70 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~v~~----~~~Dl~d~~~~~~~~~~~d~vi   70 (334)
                      |||.|.| +|++|..++..|+ .|++|+++++++++.+.+...      +.+.-    -.+.++...+..++..++|+||
T Consensus         1 mkI~VIG-lGyvGl~~A~~lA-~G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~vi   78 (388)
T PRK15057          1 MKITISG-TGYVGLSNGLLIA-QNHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYVI   78 (388)
T ss_pred             CEEEEEC-CCHHHHHHHHHHH-hCCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCEEE
Confidence            8999997 9999999997776 599999999987765433220      00000    0111211122344557789998


Q ss_pred             EeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEeccc
Q 019878           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF  116 (334)
Q Consensus        71 h~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~  116 (334)
                      =+.+....  .   ..-..++.....+++...+....+-+|.-||.
T Consensus        79 i~Vpt~~~--~---k~~~~dl~~v~~v~~~i~~~~~g~lVV~~STv  119 (388)
T PRK15057         79 IATPTDYD--P---KTNYFNTSSVESVIKDVVEINPYAVMVIKSTV  119 (388)
T ss_pred             EeCCCCCc--c---CCCCcChHHHHHHHHHHHhcCCCCEEEEeeec
Confidence            87653110  0   00112334444444444333223456666664

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=96.85  E-value=0.0043  Score=56.35  Aligned_cols=66  Identities=27%  Similarity=0.266  Sum_probs=52.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIF   70 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   70 (334)
                      |+|+|.|| |++|..++..+.+.|++|++++.++.......   .-.++.+|..|.+.+.++.+.+|+|.
T Consensus         3 ~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~---ad~~~~~~~~D~~~l~~~a~~~dvit   68 (372)
T PRK06019          3 KTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQV---ADEVIVADYDDVAALRELAEQCDVIT   68 (372)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhHh---CceEEecCCCCHHHHHHHHhcCCEEE
Confidence            45999995 89999999999999999999998765422111   12456689999999999999999875

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=96.84  E-value=0.0036  Score=60.46  Aligned_cols=71  Identities=21%  Similarity=0.298  Sum_probs=59.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHH-hcCCCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vih~a   73 (334)
                      ++|+|.| .|-+|+.+++.|.++|+++++++.+++..+.+.+ .+...+.||.++++.++++ ++++|.||-+-
T Consensus       401 ~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~-~g~~v~~GDat~~~~L~~agi~~A~~vv~~~  472 (601)
T PRK03659        401 PQVIIVG-FGRFGQVIGRLLMANKMRITVLERDISAVNLMRK-YGYKVYYGDATQLELLRAAGAEKAEAIVITC  472 (601)
T ss_pred             CCEEEec-CchHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh-CCCeEEEeeCCCHHHHHhcCCccCCEEEEEe
Confidence            3588888 8999999999999999999999999876655443 3688999999999988876 46789888664

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.83  E-value=0.017  Score=48.65  Aligned_cols=103  Identities=18%  Similarity=0.145  Sum_probs=66.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCC------------------------C--CeEEEEcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSE------------------------G--ALELVYGDVT   54 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~------------------------~--~v~~~~~Dl~   54 (334)
                      ||||.| .|.+|..+++.|...| -+++++|.+.-...++..+                        +  +++.+..++.
T Consensus         1 kVlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~   79 (234)
T cd01484           1 KVLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG   79 (234)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            689998 8999999999999998 4777877764333222211                        1  3445555554


Q ss_pred             ChhhH-HHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccC
Q 019878           55 DYRSL-VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST  122 (334)
Q Consensus        55 d~~~~-~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~  122 (334)
                      +.... ...++++|+||.+.               .|+..-..+-+.|.+. + ..+|..++.+-+|..
T Consensus        80 ~~~~~~~~f~~~~DvVi~a~---------------Dn~~aR~~ln~~c~~~-~-iplI~~g~~G~~G~v  131 (234)
T cd01484          80 PEQDFNDTFFEQFHIIVNAL---------------DNIIARRYVNGMLIFL-I-VPLIESGTEGFKGNA  131 (234)
T ss_pred             hhhhchHHHHhCCCEEEECC---------------CCHHHHHHHHHHHHHc-C-CCEEEEcccCCceEE
Confidence            33222 34556777777663               2444445677777776 3 478888877666643

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=96.81  E-value=0.011  Score=50.20  Aligned_cols=95  Identities=25%  Similarity=0.276  Sum_probs=67.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC-CCCCCeEEEEcCCCChhhHHHHhc--CCCEEEEeccccC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-PSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVE   77 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vih~a~~~~   77 (334)
                      |+|||.|||+ =|+.|++.|.++|+ |.+..-.+-..... +..+..+.+.+-+.+.+.+.+.+.  +++.||+..-.  
T Consensus         1 m~ILvlgGTt-E~r~la~~L~~~g~-v~~sv~t~~g~~~~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATHP--   76 (249)
T PF02571_consen    1 MKILVLGGTT-EGRKLAERLAEAGY-VIVSVATSYGGELLKPELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDATHP--   76 (249)
T ss_pred             CEEEEEechH-HHHHHHHHHHhcCC-EEEEEEhhhhHhhhccccCCceEEECCCCCHHHHHHHHHhCCCcEEEECCCc--
Confidence            9999999996 59999999999998 55443333222112 111367888888889999999985  59999987521  


Q ss_pred             CCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEE
Q 019878           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKII  111 (334)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v  111 (334)
                           +      -...+++..++|++. +++.+=
T Consensus        77 -----f------A~~is~na~~a~~~~-~ipylR   98 (249)
T PF02571_consen   77 -----F------AAEISQNAIEACREL-GIPYLR   98 (249)
T ss_pred             -----h------HHHHHHHHHHHHhhc-CcceEE
Confidence                 1      223457889999998 565443

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.80  E-value=0.0026  Score=56.85  Aligned_cols=73  Identities=19%  Similarity=0.130  Sum_probs=51.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc----CCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF----GCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----~~d~vih~a~~   75 (334)
                      ++|||.||+|.+|++.++.....|..+++..++.++.+..++.+-.+.  .|..+++-.+...+    ++|+|++|+|-
T Consensus       159 ~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~v--vdy~~~~~~e~~kk~~~~~~DvVlD~vg~  235 (347)
T KOG1198|consen  159 KSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGADEV--VDYKDENVVELIKKYTGKGVDVVLDCVGG  235 (347)
T ss_pred             CeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCCcEe--ecCCCHHHHHHHHhhcCCCccEEEECCCC
Confidence            369999999999999999999988555566666665544333322222  37777555444444    49999999984

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=96.79  E-value=0.004  Score=59.78  Aligned_cols=70  Identities=19%  Similarity=0.239  Sum_probs=57.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHh-cCCCEEEEec
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC-FGCHVIFHTA   73 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~-~~~d~vih~a   73 (334)
                      +|+|.| .|-+|+++++.|.++|++|++++.++++.+.+.+ .+...+.||.+|++.++++- +++|.|+-+.
T Consensus       419 hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~-~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~  489 (558)
T PRK10669        419 HALLVG-YGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE-RGIRAVLGNAANEEIMQLAHLDCARWLLLTI  489 (558)
T ss_pred             CEEEEC-CChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-CCCeEEEcCCCCHHHHHhcCccccCEEEEEc
Confidence            378888 8999999999999999999999999876655544 37899999999999887753 5688777543

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=96.73  E-value=0.022  Score=48.31  Aligned_cols=94  Identities=14%  Similarity=0.126  Sum_probs=69.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc--CCCEEEEeccccCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVEP   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vih~a~~~~~   78 (334)
                      |+|||.|||+ =|+.|++.|.++|+.|++..-.....   .....+..+.+-+.|.+.+.+.+.  ++++||+..=.   
T Consensus         3 ~~IlvlgGT~-egr~la~~L~~~g~~v~~Svat~~g~---~~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDATHP---   75 (248)
T PRK08057          3 PRILLLGGTS-EARALARALAAAGVDIVLSLAGRTGG---PADLPGPVRVGGFGGAEGLAAYLREEGIDLVIDATHP---   75 (248)
T ss_pred             ceEEEEechH-HHHHHHHHHHhCCCeEEEEEccCCCC---cccCCceEEECCCCCHHHHHHHHHHCCCCEEEECCCc---
Confidence            5799999987 69999999999999888766655332   122367888889889999999986  59999987521   


Q ss_pred             CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEE
Q 019878           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY  112 (334)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~  112 (334)
                          +      -...+++..++|++. +++.+=|
T Consensus        76 ----f------A~~is~~a~~ac~~~-~ipyiR~   98 (248)
T PRK08057         76 ----Y------AAQISANAAAACRAL-GIPYLRL   98 (248)
T ss_pred             ----c------HHHHHHHHHHHHHHh-CCcEEEE
Confidence                1      223457889999998 6654443

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=96.70  E-value=0.0021  Score=59.15  Aligned_cols=38  Identities=21%  Similarity=0.246  Sum_probs=34.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG   39 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~   39 (334)
                      |+|.|.| .|++|..++..|++.|++|+++++++.+.+.
T Consensus         4 ~kI~VIG-lG~~G~~~A~~La~~G~~V~~~D~~~~~v~~   41 (415)
T PRK11064          4 ETISVIG-LGYIGLPTAAAFASRQKQVIGVDINQHAVDT   41 (415)
T ss_pred             cEEEEEC-cchhhHHHHHHHHhCCCEEEEEeCCHHHHHH
Confidence            5799998 8999999999999999999999998876554

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=96.69  E-value=0.0043  Score=57.79  Aligned_cols=117  Identities=14%  Similarity=0.132  Sum_probs=67.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCCCCCCCCCeEEEEcC------------CCChhhHHHHhcCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLPSEGALELVYGD------------VTDYRSLVDACFGC   66 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~v~~~~~D------------l~d~~~~~~~~~~~   66 (334)
                      |+|.|.| +|++|..++-.|++.|  ++|++++.++.+.+.+... ...+.+-+            +.-..++.+++.++
T Consensus         2 m~I~ViG-~GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g-~~~~~e~gl~ell~~~~~~~l~~t~~~~~~i~~a   79 (473)
T PLN02353          2 VKICCIG-AGYVGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSD-QLPIYEPGLDEVVKQCRGKNLFFSTDVEKHVAEA   79 (473)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcC-CCccCCCCHHHHHHHhhcCCEEEEcCHHHHHhcC
Confidence            8999997 9999999999999984  8899999987765443221 11111111            11112234566789


Q ss_pred             CEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceec
Q 019878           67 HVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG  120 (334)
Q Consensus        67 d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~  120 (334)
                      |++|-|.+-.... .........++......++...+.-.-..+|...|+...|
T Consensus        80 dvi~I~V~TP~~~-~g~~~~~~~Dls~v~~a~~~i~~~l~~~~lVv~~STvp~G  132 (473)
T PLN02353         80 DIVFVSVNTPTKT-RGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVK  132 (473)
T ss_pred             CEEEEEeCCCCCC-CCCcCCCCCcHHHHHHHHHHHHhhCCCCcEEEEeCCCCCC
Confidence            9999887642210 0000012345555556666655542223566666554333

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=96.67  E-value=0.0044  Score=54.50  Aligned_cols=105  Identities=20%  Similarity=0.225  Sum_probs=68.7

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCC----CCCC-----CCeEEEEcCCCChhhHHHHhcCCCEEEEe
Q 019878            3 ILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISG----LPSE-----GALELVYGDVTDYRSLVDACFGCHVIFHT   72 (334)
Q Consensus         3 ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~----~~~~-----~~v~~~~~Dl~d~~~~~~~~~~~d~vih~   72 (334)
                      |.|.|+ |.+|..++..|+.+|. +|++++++++....    +...     ....+. .. .|   . +.++++|+||.+
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~-~t-~d---~-~~l~dADiVIit   73 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVT-GT-ND---Y-EDIAGSDVVVIT   73 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEE-Ec-CC---H-HHhCCCCEEEEe
Confidence            568997 9999999999998876 99999998653210    0000     011111 10 12   2 347899999999


Q ss_pred             ccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           73 AALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        73 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      ++...............|+...+.+++.+.+...-..+|.+|
T Consensus        74 ~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~s  115 (300)
T cd01339          74 AGIPRKPGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVT  115 (300)
T ss_pred             cCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            986433223333466789999999999998874333556555

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.67  E-value=0.022  Score=51.99  Aligned_cols=101  Identities=20%  Similarity=0.158  Sum_probs=64.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCC------------------------CC--eEEEEcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSE------------------------GA--LELVYGDVT   54 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~------------------------~~--v~~~~~Dl~   54 (334)
                      +|||.| .|.+|+.+++.|...|. +++++|.+.-...++..+                        +.  ++.+...++
T Consensus        44 ~VlviG-~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~i~  122 (392)
T PRK07878         44 RVLVIG-AGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHEFRLD  122 (392)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEeccCC
Confidence            699999 88999999999999984 677777654333222211                        12  333444443


Q ss_pred             ChhhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceecc
Q 019878           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS  121 (334)
Q Consensus        55 d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~  121 (334)
                      . +...+.++++|+||.+..               |...-..+-++|.++ + +.||+.+..+.+|.
T Consensus       123 ~-~~~~~~~~~~D~Vvd~~d---------------~~~~r~~ln~~~~~~-~-~p~v~~~~~g~~G~  171 (392)
T PRK07878        123 P-SNAVELFSQYDLILDGTD---------------NFATRYLVNDAAVLA-G-KPYVWGSIYRFEGQ  171 (392)
T ss_pred             h-hHHHHHHhcCCEEEECCC---------------CHHHHHHHHHHHHHc-C-CCEEEEEeccCEEE
Confidence            2 344566777888886642               333334466777776 3 46888887777764

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.66  E-value=0.022  Score=51.50  Aligned_cols=100  Identities=19%  Similarity=0.269  Sum_probs=65.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCC------------------------C--CeEEEEcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSE------------------------G--ALELVYGDVT   54 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~------------------------~--~v~~~~~Dl~   54 (334)
                      +|+|.| .|.+|+.+++.|...| .++++++.+.-...++..+                        +  +++.+...++
T Consensus        43 ~VliiG-~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~i~  121 (370)
T PRK05600         43 RVLVIG-AGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALRERLT  121 (370)
T ss_pred             cEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEeeeecC
Confidence            689998 8899999999999999 5888888764332222211                        2  2444444443


Q ss_pred             ChhhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceec
Q 019878           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG  120 (334)
Q Consensus        55 d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~  120 (334)
                       .+...+.++++|+||.+.-               |...-..+-++|.++ + ..+|+.+..+-+|
T Consensus       122 -~~~~~~~~~~~DlVid~~D---------------n~~~r~~in~~~~~~-~-iP~v~~~~~g~~G  169 (370)
T PRK05600        122 -AENAVELLNGVDLVLDGSD---------------SFATKFLVADAAEIT-G-TPLVWGTVLRFHG  169 (370)
T ss_pred             -HHHHHHHHhCCCEEEECCC---------------CHHHHHHHHHHHHHc-C-CCEEEEEEecCEE
Confidence             3455667788898887753               333334556777776 3 3688877655555

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.63  E-value=0.0052  Score=54.62  Aligned_cols=70  Identities=23%  Similarity=0.263  Sum_probs=46.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCC-hhhHHHHhcCCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTD-YRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d-~~~~~~~~~~~d~vih~a~   74 (334)
                      ++||+|++|.+|..+++.+...|.+|++++++++....+........+  |..+ .+.+.+. .++|+|+++++
T Consensus       165 ~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~d~v~~~~g  235 (332)
T cd08259         165 TVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVI--DGSKFSEDVKKL-GGADVVIELVG  235 (332)
T ss_pred             EEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEEE--ecHHHHHHHHhc-cCCCEEEECCC
Confidence            589999999999999999999999999998876543322211111112  2222 1122222 36899999987

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.61  E-value=0.0009  Score=53.17  Aligned_cols=65  Identities=25%  Similarity=0.297  Sum_probs=46.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |+|.+.| .|-.|+.+++.|++.|++|.+.+|++++.+.+... +++.       .++..++.+++|+|+-+-.
T Consensus         2 ~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~-g~~~-------~~s~~e~~~~~dvvi~~v~   66 (163)
T PF03446_consen    2 MKIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEA-GAEV-------ADSPAEAAEQADVVILCVP   66 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHT-TEEE-------ESSHHHHHHHBSEEEE-SS
T ss_pred             CEEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHh-hhhh-------hhhhhhHhhcccceEeecc
Confidence            5799999 79999999999999999999999997654433321 2222       2345666777899987653

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK07877 hypothetical protein; Provisional

Probab=96.53  E-value=0.025  Score=55.39  Aligned_cols=94  Identities=19%  Similarity=0.215  Sum_probs=63.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC--eEEEEEcCCCCCCCCCCC-------------------------CCeEEEEcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGLPSE-------------------------GALELVYGDVT   54 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~-------------------------~~v~~~~~Dl~   54 (334)
                      +|+|.|. | +|++++.+|...|.  ++++++.+.-...++...                         -+++.+...++
T Consensus       109 ~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~~~i~  186 (722)
T PRK07877        109 RIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFTDGLT  186 (722)
T ss_pred             CEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            6999998 8 99999999999984  888888764333222211                         24555665555


Q ss_pred             ChhhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecc
Q 019878           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (334)
Q Consensus        55 d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss  115 (334)
                       .+.+.++++++|+||.|.=               |+..=..+.++|.++ + ..+|+.++
T Consensus       187 -~~n~~~~l~~~DlVvD~~D---------------~~~~R~~ln~~a~~~-~-iP~i~~~~  229 (722)
T PRK07877        187 -EDNVDAFLDGLDVVVEECD---------------SLDVKVLLREAARAR-R-IPVLMATS  229 (722)
T ss_pred             -HHHHHHHhcCCCEEEECCC---------------CHHHHHHHHHHHHHc-C-CCEEEEcC
Confidence             5667778888999998752               333334555777776 3 36666664

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=96.52  E-value=0.0089  Score=54.80  Aligned_cols=69  Identities=20%  Similarity=0.114  Sum_probs=53.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc--CCCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vih~a   73 (334)
                      |+|||+| +|.+|..+++.+.+.|++|++++.++.......   .-.++..|..|.+.+.++++  ++|.|+-..
T Consensus        13 ~~ilIiG-~g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~---ad~~~~~~~~d~~~l~~~~~~~~id~vi~~~   83 (395)
T PRK09288         13 TRVMLLG-SGELGKEVAIEAQRLGVEVIAVDRYANAPAMQV---AHRSHVIDMLDGDALRAVIEREKPDYIVPEI   83 (395)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCchHHh---hhheEECCCCCHHHHHHHHHHhCCCEEEEee
Confidence            6899998 579999999999999999999998765422111   11356778889988888887  699888653

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=96.48  E-value=0.018  Score=51.58  Aligned_cols=33  Identities=27%  Similarity=0.503  Sum_probs=28.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRR   33 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~   33 (334)
                      |||+|+|++|++|++|++.|.+++ .++..+..+
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~   34 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVAS   34 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEC
Confidence            799999999999999999998865 588877443

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.48  E-value=0.0056  Score=52.75  Aligned_cols=97  Identities=11%  Similarity=0.074  Sum_probs=67.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC-CCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-LPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPW   79 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~   79 (334)
                      +++-|+|+.| ||+--+++-.+.|++|++++++..+.++ ++.. +.+++..-..|++.+.++.+..|.++|++..... 
T Consensus       183 ~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~L-GAd~fv~~~~d~d~~~~~~~~~dg~~~~v~~~a~-  259 (360)
T KOG0023|consen  183 KWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSL-GADVFVDSTEDPDIMKAIMKTTDGGIDTVSNLAE-  259 (360)
T ss_pred             cEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhc-CcceeEEecCCHHHHHHHHHhhcCcceeeeeccc-
Confidence            4689999999 9999999999999999999999744333 3333 5666654555888888887777777777653210 


Q ss_pred             CCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecc
Q 019878           80 LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (334)
Q Consensus        80 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss  115 (334)
                       ..           ...++..++.. +  ++|+++-
T Consensus       260 -~~-----------~~~~~~~lk~~-G--t~V~vg~  280 (360)
T KOG0023|consen  260 -HA-----------LEPLLGLLKVN-G--TLVLVGL  280 (360)
T ss_pred             -cc-----------hHHHHHHhhcC-C--EEEEEeC
Confidence             11           13455566554 3  8998884

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.48  E-value=0.0076  Score=53.24  Aligned_cols=52  Identities=29%  Similarity=0.386  Sum_probs=42.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |||.|.| +|.+|+.+++.|.+.|++|.+.+|+..                     +++.++++++|+||-+..
T Consensus         5 m~I~iiG-~G~~G~~lA~~l~~~G~~V~~~~r~~~---------------------~~~~~~~~~advvi~~vp   56 (308)
T PRK14619          5 KTIAILG-AGAWGSTLAGLASANGHRVRVWSRRSG---------------------LSLAAVLADADVIVSAVS   56 (308)
T ss_pred             CEEEEEC-ccHHHHHHHHHHHHCCCEEEEEeCCCC---------------------CCHHHHHhcCCEEEEECC
Confidence            8999998 899999999999999999999998753                     123455667888887653

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.48  E-value=0.0021  Score=52.85  Aligned_cols=65  Identities=17%  Similarity=0.163  Sum_probs=44.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc-CCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-GCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-~~d~vih~a~   74 (334)
                      |+|+|+|. |.+|+++++.|.+.|++|++.+++++....+...-+.+.+  |.      .+++. ++|+++.+|.
T Consensus        29 k~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~v--~~------~~l~~~~~Dv~vp~A~   94 (200)
T cd01075          29 KTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATVV--AP------EEIYSVDADVFAPCAL   94 (200)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEE--cc------hhhccccCCEEEeccc
Confidence            57999995 7999999999999999999988876543322211022222  21      22332 6999998875

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=96.47  E-value=0.019  Score=50.37  Aligned_cols=103  Identities=17%  Similarity=0.201  Sum_probs=71.9

Q ss_pred             EEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCCCC----CC-----CCCeEEEEcCCCChhhHHHHhcCCCEEEEec
Q 019878            5 VSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGL----PS-----EGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (334)
Q Consensus         5 ItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~----~~-----~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a   73 (334)
                      |.| +|.+|++++..|+.++  .++.++++..+.....    ..     ..++++..   .|    .+.++++|+||-+|
T Consensus         1 iIG-aG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~----~~~~~daDivVita   72 (299)
T TIGR01771         1 IIG-AGNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRS---GD----YSDCKDADLVVITA   72 (299)
T ss_pred             CCC-cCHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEec---CC----HHHHCCCCEEEECC
Confidence            345 6999999999998876  4799999876543211    00     01223221   12    35778999999999


Q ss_pred             cccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecc
Q 019878           74 ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (334)
Q Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss  115 (334)
                      |.......+....++.|....+.+.+.+.++..-..++.+|.
T Consensus        73 g~~rk~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsN  114 (299)
T TIGR01771        73 GAPQKPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATN  114 (299)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            985443345567889999999999999999854456776663

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]

Probab=96.45  E-value=0.0038  Score=55.04  Aligned_cols=73  Identities=19%  Similarity=0.224  Sum_probs=60.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChh-hHHHHhcCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYR-SLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~-~~~~~~~~~d~vih~a~~   75 (334)
                      +||++| +||+.+.++..|.+++ .+|++.+|...+...+-...+++.+..|+.+.+ .++...++.|+|+-+-..
T Consensus         4 ~vlllg-sg~v~~p~~d~ls~~~dv~vtva~~~~~~~~~~~~~~~~~av~ldv~~~~~~L~~~v~~~D~viSLlP~   78 (445)
T KOG0172|consen    4 GVLLLG-SGFVSRPVADFLSRKKDVNVTVASRTLKDAEALVKGINIKAVSLDVADEELALRKEVKPLDLVISLLPY   78 (445)
T ss_pred             ceEEec-CccccchHHHHHhhcCCceEEEehhhHHHHHHHhcCCCccceEEEccchHHHHHhhhcccceeeeeccc
Confidence            499999 9999999999999875 678888887776665555446889999999998 888889999999988754

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.45  E-value=0.036  Score=50.44  Aligned_cols=100  Identities=21%  Similarity=0.223  Sum_probs=62.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCC------------------------CC--eEEEEcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSE------------------------GA--LELVYGDVT   54 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~------------------------~~--v~~~~~Dl~   54 (334)
                      +|+|.| +|.+|+++++.|...|. ++++++++.-...++..+                        +.  ++.+...+.
T Consensus       137 ~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~~~  215 (376)
T PRK08762        137 RVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQERVT  215 (376)
T ss_pred             cEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            689997 68899999999999995 788888863222111110                        22  333333333


Q ss_pred             ChhhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceec
Q 019878           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG  120 (334)
Q Consensus        55 d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~  120 (334)
                       .+.+.+.++++|+||++..               |...-..+-++|.++ + ..+|+.+....+|
T Consensus       216 -~~~~~~~~~~~D~Vv~~~d---------------~~~~r~~ln~~~~~~-~-ip~i~~~~~g~~g  263 (376)
T PRK08762        216 -SDNVEALLQDVDVVVDGAD---------------NFPTRYLLNDACVKL-G-KPLVYGAVFRFEG  263 (376)
T ss_pred             -hHHHHHHHhCCCEEEECCC---------------CHHHHHHHHHHHHHc-C-CCEEEEEeccCEE
Confidence             3445666778888888753               222223466777776 3 4788887655554

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.45  E-value=0.0095  Score=47.36  Aligned_cols=52  Identities=21%  Similarity=0.333  Sum_probs=44.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      +|||.|+++.+|..+++.|.++|.+|.++.|..                      +++.+.+.++|+||.+.+.
T Consensus        46 ~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~----------------------~~l~~~l~~aDiVIsat~~   97 (168)
T cd01080          46 KVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT----------------------KNLKEHTKQADIVIVAVGK   97 (168)
T ss_pred             EEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc----------------------hhHHHHHhhCCEEEEcCCC
Confidence            699999877889999999999999998888762                      3456788899999988874

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.43  E-value=0.064  Score=46.04  Aligned_cols=97  Identities=13%  Similarity=0.169  Sum_probs=59.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCC------------------------CC--eEEEEcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSE------------------------GA--LELVYGDVT   54 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~------------------------~~--v~~~~~Dl~   54 (334)
                      +|+|.| .|.+|+++++.|...| .++++++.+.-...++..+                        +.  ++.+. +..
T Consensus        32 ~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~-~~i  109 (268)
T PRK15116         32 HICVVG-IGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVD-DFI  109 (268)
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEe-ccc
Confidence            689998 8999999999999999 6888888764433322211                        11  22222 222


Q ss_pred             ChhhHHHHhc-CCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccc
Q 019878           55 DYRSLVDACF-GCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF  117 (334)
Q Consensus        55 d~~~~~~~~~-~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~  117 (334)
                      +.+...+.+. ++|+||.+..               ++..-..+.+.|+++ + ..+|.++.++
T Consensus       110 ~~e~~~~ll~~~~D~VIdaiD---------------~~~~k~~L~~~c~~~-~-ip~I~~gGag  156 (268)
T PRK15116        110 TPDNVAEYMSAGFSYVIDAID---------------SVRPKAALIAYCRRN-K-IPLVTTGGAG  156 (268)
T ss_pred             ChhhHHHHhcCCCCEEEEcCC---------------CHHHHHHHHHHHHHc-C-CCEEEECCcc
Confidence            3444445553 4777776653               233345688888887 3 3666555443

>PRK07411 hypothetical protein; Validated

Probab=96.43  E-value=0.041  Score=50.24  Aligned_cols=101  Identities=21%  Similarity=0.194  Sum_probs=64.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCC------------------------C--CeEEEEcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSE------------------------G--ALELVYGDVT   54 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~------------------------~--~v~~~~~Dl~   54 (334)
                      +|||.| .|.+|+.+++.|...| -+++++|.+.-...++..+                        +  +++.+...++
T Consensus        40 ~VlivG-~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~~~~~  118 (390)
T PRK07411         40 SVLCIG-TGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYETRLS  118 (390)
T ss_pred             cEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEecccC
Confidence            699998 8899999999999998 4677777654333323221                        1  3444544444


Q ss_pred             ChhhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceecc
Q 019878           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS  121 (334)
Q Consensus        55 d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~  121 (334)
                      . +...+.+.++|+||.+..               |...-..+-++|.+. + +.+|+.+..+-+|.
T Consensus       119 ~-~~~~~~~~~~D~Vvd~~d---------------~~~~r~~ln~~~~~~-~-~p~v~~~~~g~~g~  167 (390)
T PRK07411        119 S-ENALDILAPYDVVVDGTD---------------NFPTRYLVNDACVLL-N-KPNVYGSIFRFEGQ  167 (390)
T ss_pred             H-HhHHHHHhCCCEEEECCC---------------CHHHHHHHHHHHHHc-C-CCEEEEEEccCEEE
Confidence            3 345566778888887753               233334455677766 3 57888776665653

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=96.40  E-value=0.031  Score=41.88  Aligned_cols=71  Identities=20%  Similarity=0.227  Sum_probs=41.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHh-CCCeEEEE-EcCCCCCCCCCCC-CCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLK-QGHSVRAL-VRRTSDISGLPSE-GALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~-~g~~V~~~-~r~~~~~~~~~~~-~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      ||.|+|++|.+|..+++.|.+ .++++.++ +++.+....+... +++..+..+..+.+.+.  ..++|+||-+.+
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~DvV~~~~~   74 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLKGEVVLELEPEDFE--ELAVDIVFLALP   74 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCcccccccccccccCChh--hcCCCEEEEcCC
Confidence            688999999999999999998 47888887 4433222221110 11211111111222232  257899987765

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.39  E-value=0.05  Score=45.72  Aligned_cols=96  Identities=14%  Similarity=0.124  Sum_probs=58.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCC------------------------C--CeEEEEcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSE------------------------G--ALELVYGDVT   54 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~------------------------~--~v~~~~~Dl~   54 (334)
                      +|+|.| .|.+|+++++.|...| .++++++.+.-...++..+                        +  +++.+...++
T Consensus        13 ~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~~i~   91 (231)
T cd00755          13 HVAVVG-LGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEEFLT   91 (231)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeeeecC
Confidence            689999 8999999999999998 4777777654322222111                        1  2333333333


Q ss_pred             ChhhHHHHhc-CCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEeccc
Q 019878           55 DYRSLVDACF-GCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF  116 (334)
Q Consensus        55 d~~~~~~~~~-~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~  116 (334)
                       .+.....+. ++|+||.+.-               |+..-..+.+.|++. + ..+|...+.
T Consensus        92 -~~~~~~l~~~~~D~VvdaiD---------------~~~~k~~L~~~c~~~-~-ip~I~s~g~  136 (231)
T cd00755          92 -PDNSEDLLGGDPDFVVDAID---------------SIRAKVALIAYCRKR-K-IPVISSMGA  136 (231)
T ss_pred             -HhHHHHHhcCCCCEEEEcCC---------------CHHHHHHHHHHHHHh-C-CCEEEEeCC
Confidence             233444443 4788887742               333445678888887 3 356655443

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2

Probab=96.34  E-value=0.016  Score=52.84  Aligned_cols=68  Identities=21%  Similarity=0.117  Sum_probs=53.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc--CCCEEEEec
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTA   73 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vih~a   73 (334)
                      ||+|+| +|.+|..+++.+.+.|++|++++.++.......   .-+++.+|..|.+.+.++++  ++|+|+-..
T Consensus         1 kililG-~g~~~~~l~~aa~~~G~~v~~~d~~~~~~~~~~---ad~~~~~~~~d~~~l~~~~~~~~id~v~~~~   70 (380)
T TIGR01142         1 RVLLLG-SGELGKEVAIEAQRLGVEVIAVDRYANAPAMQV---AHRSYVINMLDGDALRAVIEREKPDYIVPEI   70 (380)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCEEEEEeCCCCCchhhh---CceEEEcCCCCHHHHHHHHHHhCCCEEEecc
Confidence            699999 699999999999999999999998765432211   11456678889999888887  699988654

This enzyme is an alternative to PurN (TIGR00639)

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=96.33  E-value=0.012  Score=51.52  Aligned_cols=34  Identities=29%  Similarity=0.386  Sum_probs=27.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRT   34 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~   34 (334)
                      |||.|.|++|+-|..|.+.|..+. .++..++.+.
T Consensus         3 ~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~   37 (349)
T COG0002           3 IKVGIVGASGYTGLELLRLLAGHPDVELILISSRE   37 (349)
T ss_pred             ceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechh
Confidence            589999999999999999999864 5655555444

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=96.33  E-value=0.016  Score=51.20  Aligned_cols=67  Identities=21%  Similarity=0.215  Sum_probs=53.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFH   71 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih   71 (334)
                      |+|.|+| .|++|+.++..-...|++|++++-+++.....-   .-..+.++..|.+.++++.+++|+|=.
T Consensus         2 ~tvgIlG-GGQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~v---a~~~i~~~~dD~~al~ela~~~DViT~   68 (375)
T COG0026           2 KTVGILG-GGQLGRMMALAAARLGIKVIVLDPDADAPAAQV---ADRVIVAAYDDPEALRELAAKCDVITY   68 (375)
T ss_pred             CeEEEEc-CcHHHHHHHHHHHhcCCEEEEecCCCCCchhhc---ccceeecCCCCHHHHHHHHhhCCEEEE
Confidence            4699999 899999999999999999999997665433211   124566788899999999999998753

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.32  E-value=0.0034  Score=54.99  Aligned_cols=67  Identities=22%  Similarity=0.318  Sum_probs=49.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      .|++|+| .|.+|..+++.|...|.+|++++|++......... +.+++     +.+.+.+.+.++|+||++.+
T Consensus       153 ~kvlViG-~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~-G~~~~-----~~~~l~~~l~~aDiVI~t~p  219 (296)
T PRK08306        153 SNVLVLG-FGRTGMTLARTLKALGANVTVGARKSAHLARITEM-GLSPF-----HLSELAEEVGKIDIIFNTIP  219 (296)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc-CCeee-----cHHHHHHHhCCCCEEEECCC
Confidence            3799999 58899999999999999999999986542221111 23322     23456778889999999863

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.27  E-value=0.005  Score=55.74  Aligned_cols=72  Identities=14%  Similarity=0.167  Sum_probs=52.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      +|+|+|+ |-+|...++.|...|.+|++++|++.+...+...-. ..+..+..+.+.+.+.+.++|+||++++.
T Consensus       169 ~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g-~~v~~~~~~~~~l~~~l~~aDvVI~a~~~  240 (370)
T TIGR00518       169 DVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFG-GRIHTRYSNAYEIEDAVKRADLLIGAVLI  240 (370)
T ss_pred             eEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcC-ceeEeccCCHHHHHHHHccCCEEEEcccc
Confidence            5889985 999999999999999999999998654322211101 12233556677788888999999998754

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=96.25  E-value=0.0034  Score=54.57  Aligned_cols=66  Identities=26%  Similarity=0.409  Sum_probs=45.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |+|.|.| .|.+|+.++..|.+.|++|.+.+|+++........+.+..    ..+  . .+.+.++|+||-+..
T Consensus         1 m~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~~----~~~--~-~~~~~~aDlVilavp   66 (279)
T PRK07417          1 MKIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVDE----AST--D-LSLLKDCDLVILALP   66 (279)
T ss_pred             CeEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCccc----ccC--C-HhHhcCCCEEEEcCC
Confidence            8999998 8999999999999999999999998654332221111110    011  1 134578999998764

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.23  E-value=0.0037  Score=54.43  Aligned_cols=66  Identities=17%  Similarity=0.246  Sum_probs=48.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      +++|+| .|.+|+.+++.|...|.+|++.+|++.+....... +...+     +.+.+.+.+.++|+||++..
T Consensus       153 ~v~IiG-~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~-g~~~~-----~~~~l~~~l~~aDiVint~P  218 (287)
T TIGR02853       153 NVMVLG-FGRTGMTIARTFSALGARVFVGARSSADLARITEM-GLIPF-----PLNKLEEKVAEIDIVINTIP  218 (287)
T ss_pred             EEEEEc-ChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC-CCeee-----cHHHHHHHhccCCEEEECCC
Confidence            689999 58899999999999999999999987543211110 12211     24456778889999999864

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.20  E-value=0.019  Score=51.08  Aligned_cols=94  Identities=18%  Similarity=0.216  Sum_probs=55.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHh-CCCe---EEEEEcCCCCCCCCCCC-CCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLK-QGHS---VRALVRRTSDISGLPSE-GALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~-~g~~---V~~~~r~~~~~~~~~~~-~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      |+|.|.||||++|+.+++.|.+ ....   +..+.........+.-. ..+.+...   |++    .+.++|+|+.+++.
T Consensus         6 ~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~~~~l~v~~~---~~~----~~~~~Divf~a~~~   78 (347)
T PRK06728          6 YHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFKGREIIIQEA---KIN----SFEGVDIAFFSAGG   78 (347)
T ss_pred             CEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeCCcceEEEeC---CHH----HhcCCCEEEECCCh
Confidence            5899999999999999999994 5555   55554433222221110 12222222   222    23679999988753


Q ss_pred             cCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEeccccee
Q 019878           76 VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL  119 (334)
Q Consensus        76 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~  119 (334)
                      .                .+..+...+.+. + ..+|=.||..=+
T Consensus        79 ~----------------~s~~~~~~~~~~-G-~~VID~Ss~fR~  104 (347)
T PRK06728         79 E----------------VSRQFVNQAVSS-G-AIVIDNTSEYRM  104 (347)
T ss_pred             H----------------HHHHHHHHHHHC-C-CEEEECchhhcC
Confidence            1                124555555555 2 477777776544

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.18  E-value=0.0019  Score=56.14  Aligned_cols=69  Identities=23%  Similarity=0.288  Sum_probs=47.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCC-CCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSE-GALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~-~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      +++|+|+ |.+|++++..|...| .+|++++|+.++...+.+. .....+..++    ...+.+.++|+||++...
T Consensus       125 ~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~~----~~~~~~~~~DivInaTp~  195 (278)
T PRK00258        125 RILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELDL----ELQEELADFDLIINATSA  195 (278)
T ss_pred             EEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeecc----cchhccccCCEEEECCcC
Confidence            5899995 999999999999999 7999999987654333211 0000011111    223556789999999875

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=96.18  E-value=0.0052  Score=54.01  Aligned_cols=68  Identities=18%  Similarity=0.303  Sum_probs=50.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |+|.|.| .|-+|+.+++.|.+.|++|.+.+|++++...+... ++..    ..+.+++.+.+.++|+|+-+..
T Consensus         1 M~Ig~IG-lG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~-g~~~----~~s~~~~~~~~~~~dvIi~~vp   68 (298)
T TIGR00872         1 MQLGLIG-LGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKED-RTTG----VANLRELSQRLSAPRVVWVMVP   68 (298)
T ss_pred             CEEEEEc-chHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc-CCcc----cCCHHHHHhhcCCCCEEEEEcC
Confidence            8999999 89999999999999999999999987754433321 1111    1345555556677899987753

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.17  E-value=0.027  Score=52.20  Aligned_cols=72  Identities=17%  Similarity=0.231  Sum_probs=51.3

Q ss_pred             CcEEEEcC----------------CChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc
Q 019878            1 MKILVSGA----------------SGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF   64 (334)
Q Consensus         1 m~ilItG~----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~   64 (334)
                      +|||||+|                ||-.|.+|++.+..+|.+|+.+.-...    +..+.+++++.+  .+..++.+++.
T Consensus       257 kkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~----~~~p~~v~~i~V--~ta~eM~~av~  330 (475)
T PRK13982        257 RRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD----LADPQGVKVIHV--ESARQMLAAVE  330 (475)
T ss_pred             CEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC----CCCCCCceEEEe--cCHHHHHHHHH
Confidence            46888865                799999999999999999999874322    111235776644  45655555553


Q ss_pred             ---CCCEEEEeccccCC
Q 019878           65 ---GCHVIFHTAALVEP   78 (334)
Q Consensus        65 ---~~d~vih~a~~~~~   78 (334)
                         +.|++|++|+..++
T Consensus       331 ~~~~~Di~I~aAAVaDy  347 (475)
T PRK13982        331 AALPADIAIFAAAVADW  347 (475)
T ss_pred             hhCCCCEEEEeccccce
Confidence               37999999997543

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=96.16  E-value=0.06  Score=44.74  Aligned_cols=101  Identities=16%  Similarity=0.152  Sum_probs=66.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCC------------------------CCeEEEE-cCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSE------------------------GALELVY-GDVTD   55 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~------------------------~~v~~~~-~Dl~d   55 (334)
                      +|+|.| -|.+|++.++.|.+.| -++.+++-+.-...++..+                        +..+... -|.-+
T Consensus        32 ~V~VvG-iGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f~t  110 (263)
T COG1179          32 HVCVVG-IGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDFIT  110 (263)
T ss_pred             cEEEEe-cCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhhhC
Confidence            488898 7889999999999998 4677776654332222221                        2222222 24556


Q ss_pred             hhhHHHHhcC-CCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccC
Q 019878           56 YRSLVDACFG-CHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST  122 (334)
Q Consensus        56 ~~~~~~~~~~-~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~  122 (334)
                      .+.+.+.+.+ +|+||.+.               .|+..-..|+..|+++ ++   -++||.++-+..
T Consensus       111 ~en~~~~~~~~~DyvIDai---------------D~v~~Kv~Li~~c~~~-ki---~vIss~Gag~k~  159 (263)
T COG1179         111 EENLEDLLSKGFDYVIDAI---------------DSVRAKVALIAYCRRN-KI---PVISSMGAGGKL  159 (263)
T ss_pred             HhHHHHHhcCCCCEEEEch---------------hhhHHHHHHHHHHHHc-CC---CEEeeccccCCC
Confidence            6777777654 89999875               3556667899999997 33   455776666543

>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1

Probab=96.15  E-value=0.095  Score=45.46  Aligned_cols=97  Identities=24%  Similarity=0.296  Sum_probs=63.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCC------------------------C--CeEEEEcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSE------------------------G--ALELVYGDVT   54 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~------------------------~--~v~~~~~Dl~   54 (334)
                      +|||.| .|.+|..+++.|...| .+++++|.+.-...++..+                        +  +++.+..++ 
T Consensus        21 ~VLIvG-~gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~~~~~-   98 (286)
T cd01491          21 NVLISG-LGGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVSTGPL-   98 (286)
T ss_pred             cEEEEc-CCHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEEeccC-
Confidence            699999 7889999999999999 4678877765443333221                        1  122232221 


Q ss_pred             ChhhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceecc
Q 019878           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS  121 (334)
Q Consensus        55 d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~  121 (334)
                          ..+.+.++|+||.+..               |...-..+-++|+++ + ..||...+.+.+|.
T Consensus        99 ----~~~~l~~fdvVV~~~~---------------~~~~~~~in~~c~~~-~-ipfI~a~~~G~~G~  144 (286)
T cd01491          99 ----TTDELLKFQVVVLTDA---------------SLEDQLKINEFCHSP-G-IKFISADTRGLFGS  144 (286)
T ss_pred             ----CHHHHhcCCEEEEecC---------------CHHHHHHHHHHHHHc-C-CEEEEEeccccEEE
Confidence                1234566777776532               334445677888886 3 48999998888874

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=96.14  E-value=0.0066  Score=53.46  Aligned_cols=35  Identities=40%  Similarity=0.664  Sum_probs=32.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~   36 (334)
                      |+|+|.| +|-+|+.++..|.+.|++|++++|+++.
T Consensus         1 m~I~IiG-~G~~G~~~a~~L~~~g~~V~~~~r~~~~   35 (304)
T PRK06522          1 MKIAILG-AGAIGGLFGAALAQAGHDVTLVARRGAH   35 (304)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCeEEEEECChHH
Confidence            8999999 5999999999999999999999996554

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.13  E-value=0.0015  Score=46.77  Aligned_cols=66  Identities=24%  Similarity=0.342  Sum_probs=44.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC---CeEEEE-EcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQG---HSVRAL-VRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g---~~V~~~-~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      ||.|.| +|-+|++|++.|.+.|   ++|.+. +|++++...+...-.+.+...      +..+++++.|+||-+.-
T Consensus         1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~------~~~~~~~~advvilav~   70 (96)
T PF03807_consen    1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATAD------DNEEAAQEADVVILAVK   70 (96)
T ss_dssp             EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESE------EHHHHHHHTSEEEE-S-
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccC------ChHHhhccCCEEEEEEC
Confidence            577885 9999999999999999   999965 888775543322112233221      24566678999998764

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>cd01490 Ube1_repeat2 Ubiquitin activating enzyme (E1), repeat 2

Probab=96.11  E-value=0.086  Score=48.41  Aligned_cols=102  Identities=13%  Similarity=0.124  Sum_probs=63.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC------eEEEEEcCCCCCCCCCCC------------------------C--CeEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH------SVRALVRRTSDISGLPSE------------------------G--ALELV   49 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~------~V~~~~r~~~~~~~~~~~------------------------~--~v~~~   49 (334)
                      ||||.| +|.||..+++.|+..|.      +++++|.+.-...++..+                        +  +++.+
T Consensus         1 kVlvVG-aGGlGcE~lKnLal~Gv~~g~~G~I~IvD~D~Ie~SNLnRQfLf~~~dIGk~Ka~vAa~~l~~lNp~v~I~a~   79 (435)
T cd01490           1 KVFLVG-AGAIGCELLKNFALMGVGTGESGEITVTDMDNIEKSNLNRQFLFRPHDVGKPKSEVAAAAVKAMNPDLKITAL   79 (435)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCcCCCCeEEEECCCCccccccCcCccCChhHcCcHHHHHHHHHHHHHCCCCEEEEE
Confidence            689999 89999999999999887      888888765544444331                        1  12223


Q ss_pred             EcCCCChhh--H-HHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceecc
Q 019878           50 YGDVTDYRS--L-VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS  121 (334)
Q Consensus        50 ~~Dl~d~~~--~-~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~  121 (334)
                      ...+.....  + .+.+.++|+||++.               .|+..-..+-+.|..++  +.+|..+|.+.+|.
T Consensus        80 ~~~v~~~~~~~~~~~f~~~~DvVi~al---------------Dn~~aR~~vn~~C~~~~--iPli~~gt~G~~G~  137 (435)
T cd01490          80 QNRVGPETEHIFNDEFWEKLDGVANAL---------------DNVDARMYVDRRCVYYR--KPLLESGTLGTKGN  137 (435)
T ss_pred             ecccChhhhhhhhHHHhcCCCEEEECC---------------CCHHHHHHHHHHHHHhC--CCEEEEecccceeE
Confidence            222221100  0 12334455555442               35666667788888873  47888887777663

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the second repeat of Ub-E1.

>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit

Probab=96.09  E-value=0.19  Score=43.66  Aligned_cols=87  Identities=14%  Similarity=0.131  Sum_probs=58.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC-CCCCCCCCCeEEEEcCCCChhhHHHHhcC--CCEEEEeccccCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAALVEP   78 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vih~a~~~~~   78 (334)
                      +|+|-|.||.+|+.+.+.|...|.+++. .-++.+ .+.+          ..+.-..++.++.+.  +|.++-+...   
T Consensus         8 ~~~~~g~~~~~~~~~~~~~~~~g~~~v~-~V~p~~~~~~v----------~G~~~y~sv~dlp~~~~~Dlavi~vpa---   73 (286)
T TIGR01019         8 KVIVQGITGSQGSFHTEQMLAYGTNIVG-GVTPGKGGTTV----------LGLPVFDSVKEAVEETGANASVIFVPA---   73 (286)
T ss_pred             cEEEecCCcHHHHHHHHHHHhCCCCEEE-EECCCCCccee----------cCeeccCCHHHHhhccCCCEEEEecCH---
Confidence            6999999999999999999999988444 444442 1111          133344455566555  7888877642   


Q ss_pred             CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEeccc
Q 019878           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF  116 (334)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~  116 (334)
                                   ..+..+++.|.+. +++.+|.+|+-
T Consensus        74 -------------~~v~~~l~e~~~~-Gvk~avIis~G   97 (286)
T TIGR01019        74 -------------PFAADAIFEAIDA-GIELIVCITEG   97 (286)
T ss_pred             -------------HHHHHHHHHHHHC-CCCEEEEECCC
Confidence                         1234667777776 78998888863

ATP citrate lyases appear to form an outgroup.

>PRK07574 formate dehydrogenase; Provisional

Probab=96.09  E-value=0.029  Score=50.82  Aligned_cols=66  Identities=17%  Similarity=0.078  Sum_probs=47.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      |+|.|.| .|-||+.+++.|...|.+|++.+|.......... .+++       -..++.++++.+|+|+.+...
T Consensus       193 ktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~-~g~~-------~~~~l~ell~~aDvV~l~lPl  258 (385)
T PRK07574        193 MTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQE-LGLT-------YHVSFDSLVSVCDVVTIHCPL  258 (385)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCchhhHhh-cCce-------ecCCHHHHhhcCCEEEEcCCC
Confidence            5789999 8999999999999999999999987632211111 0122       123477888999999887753

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.08  E-value=0.03  Score=50.22  Aligned_cols=95  Identities=17%  Similarity=0.114  Sum_probs=53.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHH-hCCCe---EEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecccc
Q 019878            1 MKILVSGASGYLGGRLCHALL-KQGHS---VRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~-~~g~~---V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~   76 (334)
                      |+|.|.||||++|+.+++.|+ ++...   ++.++.+... .......+-.....++.+.+    .+.++|+|+.+++..
T Consensus         2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg-~~~~~f~g~~~~v~~~~~~~----~~~~~Divf~a~~~~   76 (369)
T PRK06598          2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAG-GAAPSFGGKEGTLQDAFDID----ALKKLDIIITCQGGD   76 (369)
T ss_pred             eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhC-CcccccCCCcceEEecCChh----HhcCCCEEEECCCHH
Confidence            579999999999999999555 45554   5665543221 11111111112222333333    236799999888631


Q ss_pred             CCCCCCcccchhhhhHHHHHHHHHHHhcCCCc-EEEEecccc
Q 019878           77 EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVE-KIIYTSSFF  117 (334)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~Ss~~  117 (334)
                                      .+..+...+.+. +.+ .+|=.||..
T Consensus        77 ----------------~s~~~~~~~~~a-G~~~~VID~Ss~f  101 (369)
T PRK06598         77 ----------------YTNEVYPKLRAA-GWQGYWIDAASTL  101 (369)
T ss_pred             ----------------HHHHHHHHHHhC-CCCeEEEECChHH
Confidence                            224556666665 442 466666644

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.07  E-value=0.024  Score=50.41  Aligned_cols=71  Identities=23%  Similarity=0.319  Sum_probs=46.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCCh---hhHHHHhc--CCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY---RSLVDACF--GCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~---~~~~~~~~--~~d~vih~a~   74 (334)
                      +|||+||+|.+|+..++.+...|+.++++..++++.+.+.+..--..+  |..+.   +.+.++..  ++|+|+...|
T Consensus       145 ~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi--~y~~~~~~~~v~~~t~g~gvDvv~D~vG  220 (326)
T COG0604         145 TVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHVI--NYREEDFVEQVRELTGGKGVDVVLDTVG  220 (326)
T ss_pred             EEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEE--cCCcccHHHHHHHHcCCCCceEEEECCC
Confidence            699999999999999999999997776666665544333332111222  23332   23334443  4999999887

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=96.04  E-value=0.028  Score=49.33  Aligned_cols=81  Identities=12%  Similarity=0.150  Sum_probs=50.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPW   79 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~   79 (334)
                      |||.|.||||++|..|++.|.++. .++..+..+...               |+.+   ....++++|+|+-+....   
T Consensus         3 ~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~---------------~~~~---~~~~~~~~DvvFlalp~~---   61 (313)
T PRK11863          3 PKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK---------------DAAA---RRELLNAADVAILCLPDD---   61 (313)
T ss_pred             cEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC---------------cccC---chhhhcCCCEEEECCCHH---
Confidence            479999999999999999999875 344444433221               1111   123456789888776421   


Q ss_pred             CCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccc
Q 019878           80 LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF  117 (334)
Q Consensus        80 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~  117 (334)
                                   ....+...+.+. + .++|=.|+..
T Consensus        62 -------------~s~~~~~~~~~~-g-~~VIDlSadf   84 (313)
T PRK11863         62 -------------AAREAVALIDNP-A-TRVIDASTAH   84 (313)
T ss_pred             -------------HHHHHHHHHHhC-C-CEEEECChhh
Confidence                         123444445444 2 3788888754

>TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein

Probab=96.03  E-value=0.023  Score=51.18  Aligned_cols=65  Identities=23%  Similarity=0.215  Sum_probs=50.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIF   70 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   70 (334)
                      +|+|.|| |++|..+++.+.+.|++|++++.++.......   .-+++.+|..|.+.+.++.+.+|+|.
T Consensus         1 ~igiiG~-gql~~~l~~aa~~lG~~v~~~d~~~~~p~~~~---ad~~~~~~~~d~~~i~~~a~~~dvit   65 (352)
T TIGR01161         1 TVGILGG-GQLGRMLALAARPLGIKVHVLDPDANSPAVQV---ADHVVLAPFFDPAAIRELAESCDVIT   65 (352)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCEEEEECCCCCCChhHh---CceeEeCCCCCHHHHHHHHhhCCEEE
Confidence            5899996 89999999999999999999988764332111   12345789999999999988898763

Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP.

>PRK12921 2-dehydropantoate 2-reductase; Provisional

Probab=95.99  E-value=0.0097  Score=52.46  Aligned_cols=34  Identities=41%  Similarity=0.654  Sum_probs=31.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~   36 (334)
                      |||+|.| +|.+|..++..|.+.|++|.+++| +++
T Consensus         1 mkI~IiG-~G~iG~~~a~~L~~~g~~V~~~~r-~~~   34 (305)
T PRK12921          1 MRIAVVG-AGAVGGTFGGRLLEAGRDVTFLVR-PKR   34 (305)
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHCCCceEEEec-HHH
Confidence            8999998 899999999999999999999999 443

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=95.99  E-value=0.0031  Score=50.88  Aligned_cols=65  Identities=18%  Similarity=0.197  Sum_probs=45.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      ++|.|.| .|-||+.+++.|..-|.+|++.+|+......... ..+        ...++.++++++|+|+.+...
T Consensus        37 ~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~-~~~--------~~~~l~ell~~aDiv~~~~pl  101 (178)
T PF02826_consen   37 KTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADE-FGV--------EYVSLDELLAQADIVSLHLPL  101 (178)
T ss_dssp             SEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHH-TTE--------EESSHHHHHHH-SEEEE-SSS
T ss_pred             CEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhccc-ccc--------eeeehhhhcchhhhhhhhhcc
Confidence            3689998 8999999999999999999999999864320000 011        223567788889999988764

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=95.96  E-value=0.0054  Score=54.58  Aligned_cols=73  Identities=22%  Similarity=0.334  Sum_probs=47.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCC-CeEE-----EEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEG-ALEL-----VYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~v~~-----~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |+|.|.| +|.+|+.++..|++.|++|.+++|+++..+.+.... ...+     ....+....+..+.++++|+||-+..
T Consensus         2 mkI~iiG-~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~   80 (325)
T PRK00094          2 MKIAVLG-AGSWGTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVAVP   80 (325)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeCC
Confidence            6899999 799999999999999999999999765432221110 0000     00011112234456678999987764

>PRK08818 prephenate dehydrogenase; Provisional

Probab=95.96  E-value=0.026  Score=50.82  Aligned_cols=56  Identities=14%  Similarity=0.097  Sum_probs=42.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC-CCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      +||.|.|++|.+|+++++.|.+. +++|+++++....                   .....+.+.++|+||-|...
T Consensus         5 ~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~~-------------------~~~~~~~v~~aDlVilavPv   61 (370)
T PRK08818          5 PVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADPG-------------------SLDPATLLQRADVLIFSAPI   61 (370)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCccc-------------------cCCHHHHhcCCCEEEEeCCH
Confidence            47999999999999999999975 8899998874211                   01234567789999988754

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=95.95  E-value=0.023  Score=55.14  Aligned_cols=70  Identities=23%  Similarity=0.383  Sum_probs=58.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHH-hcCCCEEEEec
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTA   73 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vih~a   73 (334)
                      +|+|.| .|-+|+.+++.|.++|.++++++.++++.+.+.+ .+.+.+.||.++++.++++ ++++|.||-+-
T Consensus       402 ~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~-~g~~v~~GDat~~~~L~~agi~~A~~vvv~~  472 (621)
T PRK03562        402 RVIIAG-FGRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRK-FGMKVFYGDATRMDLLESAGAAKAEVLINAI  472 (621)
T ss_pred             cEEEEe-cChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh-cCCeEEEEeCCCHHHHHhcCCCcCCEEEEEe
Confidence            588888 8999999999999999999999999887655543 3688999999999988765 45688888664

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=95.94  E-value=0.026  Score=50.16  Aligned_cols=94  Identities=22%  Similarity=0.216  Sum_probs=54.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC---CeEEEEEcCCCCCCCCCCCC-CeEEEEcCCCChhhHHHHhcCCCEEEEecccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG---HSVRALVRRTSDISGLPSEG-ALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~-~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~   76 (334)
                      |+|.|.||||++|..|++.|.++.   .++..+.........+.-.. .+.+.  +   .+  ...+.++|+|+.+++..
T Consensus         5 ~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~~~~~~~~v~--~---~~--~~~~~~~Dvvf~a~p~~   77 (336)
T PRK08040          5 WNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLRFGGKSVTVQ--D---AA--EFDWSQAQLAFFVAGRE   77 (336)
T ss_pred             CEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEEECCcceEEE--e---Cc--hhhccCCCEEEECCCHH
Confidence            579999999999999999999853   46666644432222211100 11111  2   11  12236789988877531


Q ss_pred             CCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEeccccee
Q 019878           77 EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL  119 (334)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~  119 (334)
                                      .+..++..+.+. + .++|=.|+..=+
T Consensus        78 ----------------~s~~~~~~~~~~-g-~~VIDlS~~fRl  102 (336)
T PRK08040         78 ----------------ASAAYAEEATNA-G-CLVIDSSGLFAL  102 (336)
T ss_pred             ----------------HHHHHHHHHHHC-C-CEEEECChHhcC
Confidence                            124555555554 3 378888876533

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=95.89  E-value=0.034  Score=49.73  Aligned_cols=71  Identities=18%  Similarity=0.190  Sum_probs=47.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-CCCeEEEEcCCC---Ch-hhHHHHh-cCCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-EGALELVYGDVT---DY-RSLVDAC-FGCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~v~~~~~Dl~---d~-~~~~~~~-~~~d~vih~a~   74 (334)
                      +|||+|++|.+|..+++.+...|.+|+++++++++.+.+.+ . ++..+ .|..   +. +.+.+.. .++|+|+++.|
T Consensus       154 ~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l-Ga~~v-i~~~~~~~~~~~i~~~~~~gvd~v~d~~g  230 (338)
T cd08295         154 TVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL-GFDDA-FNYKEEPDLDAALKRYFPNGIDIYFDNVG  230 (338)
T ss_pred             EEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc-CCcee-EEcCCcccHHHHHHHhCCCCcEEEEECCC
Confidence            59999999999999999999999999998887765443322 1 22222 1222   21 1222222 35899999876

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=95.88  E-value=0.04  Score=48.27  Aligned_cols=69  Identities=17%  Similarity=0.140  Sum_probs=40.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC--e-EEEEEcCCCCCCCCCCCCCeEEEEcCCCChh--hHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH--S-VRALVRRTSDISGLPSEGALELVYGDVTDYR--SLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~--~-V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~--~~~~~~~~~d~vih~a~   74 (334)
                      |+|.|.|+||.+|+.+++.|.++..  + +.++....+....     .++|....+.-++  .-...++++|+++.++|
T Consensus         2 ~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~~-----~~~f~~~~~~v~~~~~~~~~~~~~Divf~~ag   75 (334)
T COG0136           2 LNVAVLGATGAVGQVLLELLEERHFPFEELVLLASARSAGKK-----YIEFGGKSIGVPEDAADEFVFSDVDIVFFAAG   75 (334)
T ss_pred             cEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecccccCCc-----cccccCccccCccccccccccccCCEEEEeCc
Confidence            5799999999999999999998642  2 3333322221111     1222222122222  11223348999999997

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=95.87  E-value=0.036  Score=49.25  Aligned_cols=71  Identities=18%  Similarity=0.252  Sum_probs=47.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChh---hHHHHh-cCCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYR---SLVDAC-FGCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~---~~~~~~-~~~d~vih~a~   74 (334)
                      +|||+||+|.+|..+++.+...|.+|+++++++++.+.+.+. ++..+ .|..+.+   .+.+.. .++|+|+++.|
T Consensus       146 ~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~-Ga~~v-i~~~~~~~~~~v~~~~~~gvd~vld~~g  220 (329)
T cd08294         146 TVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKEL-GFDAV-FNYKTVSLEEALKEAAPDGIDCYFDNVG  220 (329)
T ss_pred             EEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc-CCCEE-EeCCCccHHHHHHHHCCCCcEEEEECCC
Confidence            589999999999999999999999999998877654433222 22222 1333222   222222 34899999876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3

Probab=95.86  E-value=0.15  Score=44.30  Aligned_cols=103  Identities=20%  Similarity=0.245  Sum_probs=61.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCC------------------------C--CeEEEEcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSE------------------------G--ALELVYGDVT   54 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~------------------------~--~v~~~~~Dl~   54 (334)
                      ||||.| .|.+|.++++.|...| -+++++|.+.-...++..+                        +  +++.+..++.
T Consensus         1 kVlVVG-aGGlG~eilknLal~Gvg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np~v~I~~~~~~i~   79 (291)
T cd01488           1 KILVIG-AGGLGCELLKNLALSGFRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVPGVNVTPHFGKIQ   79 (291)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCCCCEEEEEecccC
Confidence            689998 8899999999999998 4677777654333333221                        1  3455556665


Q ss_pred             ChhhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhc------CCCcEEEEecccceeccC
Q 019878           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKET------KTVEKIIYTSSFFALGST  122 (334)
Q Consensus        55 d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~v~~Ss~~v~~~~  122 (334)
                      +.+  .+.++++|+||.+.-               |+..-..+-+.+.+.      .....+|..++.+-+|..
T Consensus        80 ~~~--~~f~~~fdvVi~alD---------------n~~aR~~in~~~~~~~~~~~~~~~iPlI~~gt~G~~G~v  136 (291)
T cd01488          80 DKD--EEFYRQFNIIICGLD---------------SIEARRWINGTLVSLLLYEDPESIIPLIDGGTEGFKGHA  136 (291)
T ss_pred             chh--HHHhcCCCEEEECCC---------------CHHHHHHHHHHHHHhccccccccCccEEEEEEcccEEEE
Confidence            432  455667787776532               222222222323322      123578888887777754

UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.86  E-value=0.01  Score=55.38  Aligned_cols=68  Identities=16%  Similarity=0.161  Sum_probs=46.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC----CCCCCCCeEEEEcCCCChhhHHHHhc-CCCEEEEecccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS----GLPSEGALELVYGDVTDYRSLVDACF-GCHVIFHTAALV   76 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~v~~~~~Dl~d~~~~~~~~~-~~d~vih~a~~~   76 (334)
                      +|+|||++| +|.+.++.|++.|++|.+.+++.....    .+.. .++++..++  +...   .+. ++|.||..+|+.
T Consensus         7 ~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~-~g~~~~~~~--~~~~---~~~~~~d~vV~s~gi~   79 (447)
T PRK02472          7 KVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLE-EGIKVICGS--HPLE---LLDEDFDLMVKNPGIP   79 (447)
T ss_pred             EEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHh-cCCEEEeCC--CCHH---HhcCcCCEEEECCCCC
Confidence            589999988 999999999999999999987653221    1211 145555443  1111   233 389999999874

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.84  E-value=0.033  Score=49.16  Aligned_cols=64  Identities=17%  Similarity=0.258  Sum_probs=48.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      ++|.|.| .|-||+.+++.|...|.+|++.+|..+...      ++..+    ....++.+++.++|+|+.+...
T Consensus       137 ~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~------~~~~~----~~~~~l~e~l~~aDvvv~~lPl  200 (312)
T PRK15469        137 FTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWP------GVQSF----AGREELSAFLSQTRVLINLLPN  200 (312)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCC------Cceee----cccccHHHHHhcCCEEEECCCC
Confidence            3688888 999999999999999999999998654322      11211    1345688899999999988753

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=95.84  E-value=0.032  Score=49.61  Aligned_cols=71  Identities=17%  Similarity=0.237  Sum_probs=46.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHH----HHh-cCCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV----DAC-FGCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~----~~~-~~~d~vih~a~   74 (334)
                      +|||+|++|.+|..+++.+...|.+|+++++++++.+.+.+. ++..+ .|..+.+.+.    ... .++|+|+++.|
T Consensus       141 ~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~l-Ga~~v-i~~~~~~~~~~~~~~~~~~gvdvv~d~~G  216 (325)
T TIGR02825       141 TVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKL-GFDVA-FNYKTVKSLEETLKKASPDGYDCYFDNVG  216 (325)
T ss_pred             EEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc-CCCEE-EeccccccHHHHHHHhCCCCeEEEEECCC
Confidence            589999999999999999999999999998876654433222 22221 1222221222    222 24899999876

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=95.83  E-value=0.03  Score=50.20  Aligned_cols=69  Identities=16%  Similarity=0.124  Sum_probs=45.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHh---cCCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC---FGCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~---~~~d~vih~a~   74 (334)
                      +|||+|+ |.+|...++.+...|. +|+++++++++.+...+. ++..+ .|..+.+ +.+..   .++|+||.+.|
T Consensus       172 ~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~l-Ga~~v-i~~~~~~-~~~~~~~~g~~D~vid~~G  244 (343)
T PRK09880        172 RVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREM-GADKL-VNPQNDD-LDHYKAEKGYFDVSFEVSG  244 (343)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHc-CCcEE-ecCCccc-HHHHhccCCCCCEEEECCC
Confidence            5899985 9999999999999997 688888887655433332 23222 2333321 22222   23899999987

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=95.82  E-value=0.006  Score=53.93  Aligned_cols=69  Identities=20%  Similarity=0.245  Sum_probs=49.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      |+|+|.|+ |-+|..+++.|...| .+|++++|++++...+...-+.     +..+.+.+.+.+.++|+||.+.+.
T Consensus       179 ~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~-----~~~~~~~~~~~l~~aDvVi~at~~  248 (311)
T cd05213         179 KKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGG-----NAVPLDELLELLNEADVVISATGA  248 (311)
T ss_pred             CEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCC-----eEEeHHHHHHHHhcCCEEEECCCC
Confidence            57999985 999999999999866 7899999987654332221112     222344567777889999998874

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]

Probab=95.80  E-value=0.12  Score=43.33  Aligned_cols=95  Identities=16%  Similarity=0.097  Sum_probs=65.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc--CCCEEEEeccccCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVEP   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vih~a~~~~~   78 (334)
                      |+|+|.|||+ =+..|++.|...+..+++.+-..........  ....+.+-..+.+.+.+.++  ++|.||..--    
T Consensus         3 ~~ilvlGGT~-Dar~la~~L~~~~~~~~~ss~t~~g~~l~~~--~~~~~~~G~l~~e~l~~~l~e~~i~llIDATH----   75 (257)
T COG2099           3 MRILLLGGTS-DARALAKKLAAAPVDIILSSLTGYGAKLAEQ--IGPVRVGGFLGAEGLAAFLREEGIDLLIDATH----   75 (257)
T ss_pred             ceEEEEeccH-HHHHHHHHhhccCccEEEEEcccccccchhc--cCCeeecCcCCHHHHHHHHHHcCCCEEEECCC----
Confidence            6899999997 5899999999987555544443332222222  22356678888999999886  4999997642    


Q ss_pred             CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEE
Q 019878           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY  112 (334)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~  112 (334)
                               ..-...++|.+++|++. +++.+-|
T Consensus        76 ---------PyAa~iS~Na~~aake~-gipy~r~   99 (257)
T COG2099          76 ---------PYAARISQNAARAAKET-GIPYLRL   99 (257)
T ss_pred             ---------hHHHHHHHHHHHHHHHh-CCcEEEE
Confidence                     12345678999999998 6765544

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.79  E-value=0.028  Score=48.75  Aligned_cols=52  Identities=23%  Similarity=0.291  Sum_probs=43.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      +++|.|.+|.+|+.++..|+++|.+|+++.|..                      ..+.+.+.++|+||++.|.
T Consensus       161 ~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t----------------------~~L~~~~~~aDIvI~AtG~  212 (283)
T PRK14192        161 HAVVVGRSAILGKPMAMMLLNANATVTICHSRT----------------------QNLPELVKQADIIVGAVGK  212 (283)
T ss_pred             EEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc----------------------hhHHHHhccCCEEEEccCC
Confidence            699999999999999999999999998887632                      1245566889999999973

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=95.78  E-value=0.0065  Score=54.20  Aligned_cols=73  Identities=23%  Similarity=0.283  Sum_probs=46.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCC-CeEEEEc-----CCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEG-ALELVYG-----DVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~v~~~~~-----Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |||.|.| +|-+|+.++..|++.|++|++.+|+++..+.+.... +..+..+     .+.-.++..++++++|+||-+..
T Consensus         5 m~I~iIG-~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~v~   83 (328)
T PRK14618          5 MRVAVLG-AGAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVAVP   83 (328)
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEECc
Confidence            7899998 899999999999999999999999765432221100 0000000     01112234556678998887753

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.75  E-value=0.0083  Score=52.43  Aligned_cols=35  Identities=20%  Similarity=0.321  Sum_probs=31.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~   36 (334)
                      ++|.|.| +|.+|..++..|+..|++|++.+++++.
T Consensus         4 ~kIaViG-aG~mG~~iA~~la~~G~~V~l~d~~~~~   38 (287)
T PRK08293          4 KNVTVAG-AGVLGSQIAFQTAFHGFDVTIYDISDEA   38 (287)
T ss_pred             cEEEEEC-CCHHHHHHHHHHHhcCCeEEEEeCCHHH
Confidence            3699998 7999999999999999999999998653

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.71  E-value=0.025  Score=48.44  Aligned_cols=94  Identities=18%  Similarity=0.155  Sum_probs=57.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHH----hcCCCEEEEeccccC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA----CFGCHVIFHTAALVE   77 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~----~~~~d~vih~a~~~~   77 (334)
                      +|||+|++| +|..+++.+...|.+|+++++++.+.+.+........  .|..+.+....+    -.++|+++++++.. 
T Consensus       137 ~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-  212 (271)
T cd05188         137 TVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKELGADHV--IDYKEEDLEEELRLTGGGGADVVIDAVGGP-  212 (271)
T ss_pred             EEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCcee--ccCCcCCHHHHHHHhcCCCCCEEEECCCCH-
Confidence            589999999 9999999999999999999887654322211111111  233332222221    23589999987631 


Q ss_pred             CCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEeccc
Q 019878           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF  116 (334)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~  116 (334)
                                    .....+++.++..   .+++.+++.
T Consensus       213 --------------~~~~~~~~~l~~~---G~~v~~~~~  234 (271)
T cd05188         213 --------------ETLAQALRLLRPG---GRIVVVGGT  234 (271)
T ss_pred             --------------HHHHHHHHhcccC---CEEEEEccC
Confidence                          1233445555443   388888764

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK14852 hypothetical protein; Provisional

Probab=95.69  E-value=0.12  Score=51.89  Aligned_cols=102  Identities=11%  Similarity=0.062  Sum_probs=64.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCC------------------------C--CeEEEEcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSE------------------------G--ALELVYGDVT   54 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~------------------------~--~v~~~~~Dl~   54 (334)
                      ||+|.| .|.+|+.++..|...| -++++++.+.-...++..+                        +  +++.+...+ 
T Consensus       334 rVlVvG-lGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~~~~I-  411 (989)
T PRK14852        334 RVAIAG-LGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSFPEGV-  411 (989)
T ss_pred             cEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEEecCC-
Confidence            699999 8899999999999998 4677776654332222221                        2  355555454 


Q ss_pred             ChhhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceec
Q 019878           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG  120 (334)
Q Consensus        55 d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~  120 (334)
                      +.+.+.+.++++|+||.+.-.       .      .+..-..+.+.|.+. + ..+|+.++.+.+|
T Consensus       412 ~~en~~~fl~~~DiVVDa~D~-------~------~~~~rr~l~~~c~~~-~-IP~I~ag~~G~~g  462 (989)
T PRK14852        412 AAETIDAFLKDVDLLVDGIDF-------F------ALDIRRRLFNRALEL-G-IPVITAGPLGYSC  462 (989)
T ss_pred             CHHHHHHHhhCCCEEEECCCC-------c------cHHHHHHHHHHHHHc-C-CCEEEeeccccCe
Confidence            445667778889999966421       0      112234667778776 3 3677777644443

>COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=95.68  E-value=0.053  Score=48.37  Aligned_cols=106  Identities=14%  Similarity=0.149  Sum_probs=65.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHh--------------cCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC--------------FGC   66 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~--------------~~~   66 (334)
                      |+|.|.| -|++|-.++-.++++|++|++++.++.+.+.+..- .....  +....+-++++.              +.+
T Consensus        10 ~~I~ViG-LGYVGLPlA~~fA~~G~~ViG~DIn~~~Vd~ln~G-~~~i~--e~~~~~~v~~~v~~g~lraTtd~~~l~~~   85 (436)
T COG0677          10 ATIGVIG-LGYVGLPLAAAFASAGFKVIGVDINQKKVDKLNRG-ESYIE--EPDLDEVVKEAVESGKLRATTDPEELKEC   85 (436)
T ss_pred             eEEEEEc-cccccHHHHHHHHHcCCceEeEeCCHHHHHHHhCC-cceee--cCcHHHHHHHHHhcCCceEecChhhcccC
Confidence            5788998 99999999999999999999999998877666542 22333  333333233332              358


Q ss_pred             CEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEeccc
Q 019878           67 HVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF  116 (334)
Q Consensus        67 d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~  116 (334)
                      |++|-|..-.-.      ...+.++....+-++..++.-.-..+|.+-|+
T Consensus        86 dv~iI~VPTPl~------~~~~pDls~v~~aa~sIa~~L~kG~LVIlEST  129 (436)
T COG0677          86 DVFIICVPTPLK------KYREPDLSYVESAARSIAPVLKKGDLVILEST  129 (436)
T ss_pred             CEEEEEecCCcC------CCCCCChHHHHHHHHHHHHhcCCCCEEEEecC
Confidence            999888653111      12344455555555555554322345554444

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=95.64  E-value=0.015  Score=54.95  Aligned_cols=73  Identities=23%  Similarity=0.231  Sum_probs=47.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----------CCCeEE-EEcCCCChhhHHHHhcCCCE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----------EGALEL-VYGDVTDYRSLVDACFGCHV   68 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----------~~~v~~-~~~Dl~d~~~~~~~~~~~d~   68 (334)
                      |||.|.| +|.+|+.++..|+..|++|++.+++++....+..           ...... ..+.+.-.+++.++++++|+
T Consensus         5 ~kIavIG-~G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD~   83 (495)
T PRK07531          5 MKAACIG-GGVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGADW   83 (495)
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCCE
Confidence            5789997 9999999999999999999999998765332110           000000 00111222345667788999


Q ss_pred             EEEecc
Q 019878           69 IFHTAA   74 (334)
Q Consensus        69 vih~a~   74 (334)
                      ||-+..
T Consensus        84 Vieavp   89 (495)
T PRK07531         84 IQESVP   89 (495)
T ss_pred             EEEcCc
Confidence            996653

>PRK05708 2-dehydropantoate 2-reductase; Provisional

Probab=95.63  E-value=0.016  Score=51.01  Aligned_cols=37  Identities=27%  Similarity=0.458  Sum_probs=33.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS   38 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   38 (334)
                      |||+|.| +|-||+.++-+|.+.|++|+.+.|+.+..+
T Consensus         3 m~I~IiG-aGaiG~~~a~~L~~~G~~V~lv~r~~~~~~   39 (305)
T PRK05708          3 MTWHILG-AGSLGSLWACRLARAGLPVRLILRDRQRLA   39 (305)
T ss_pred             ceEEEEC-CCHHHHHHHHHHHhCCCCeEEEEechHHHH
Confidence            8999999 899999999999999999999999865433

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=95.61  E-value=0.0031  Score=54.89  Aligned_cols=67  Identities=21%  Similarity=0.264  Sum_probs=46.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCC-----CCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSE-----GALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~-----~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      +|+|.| +|..|++++..|...|. +|++++|+..+...+.+.     +.+.+..     .+.+.+.+.++|+|||+-.
T Consensus       129 ~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~-----~~~~~~~~~~aDiVInaTp  201 (284)
T PRK12549        129 RVVQLG-AGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATA-----GSDLAAALAAADGLVHATP  201 (284)
T ss_pred             EEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEe-----ccchHhhhCCCCEEEECCc
Confidence            689999 67799999999999996 799999987655433211     1122221     1233456678999999953

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=95.60  E-value=0.1  Score=47.23  Aligned_cols=71  Identities=17%  Similarity=0.065  Sum_probs=46.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      +|||.| +|.+|..+++.+...|.+|++++.+.++...+...-++..+. |..+.+.+.+...++|+||.+.|
T Consensus       186 ~VlV~G-~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi-~~~~~~~~~~~~~~~D~vid~~g  256 (360)
T PLN02586        186 HLGVAG-LGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFL-VSTDPEKMKAAIGTMDYIIDTVS  256 (360)
T ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEE-cCCCHHHHHhhcCCCCEEEECCC
Confidence            588866 599999999999999999888877665432221111333222 33344445555456899999876

>PRK06444 prephenate dehydrogenase; Provisional

Probab=95.60  E-value=0.016  Score=47.28  Aligned_cols=28  Identities=36%  Similarity=0.551  Sum_probs=26.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVR   28 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~   28 (334)
                      |+|.|.||+|..|+.+++.|.+.|+.|.
T Consensus         1 ~~~~iiG~~G~mG~~~~~~~~~~g~~v~   28 (197)
T PRK06444          1 MMEIIIGKNGRLGRVLCSILDDNGLGVY   28 (197)
T ss_pred             CEEEEEecCCcHHHHHHHHHHhCCCEEE
Confidence            8999999999999999999999999986

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=95.59  E-value=0.019  Score=49.65  Aligned_cols=68  Identities=26%  Similarity=0.344  Sum_probs=44.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCCh---hhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY---RSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~---~~~~~~~~~~d~vih~a~~   75 (334)
                      |+|+|.| .|.+|+++++.|.++|+.|.+++++.......      .-...++.|.   +........+|+||-+..+
T Consensus         4 ~~v~IvG-~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~------~a~~lgv~d~~~~~~~~~~~~~aD~VivavPi   74 (279)
T COG0287           4 MKVGIVG-LGLMGGSLARALKEAGLVVRIIGRDRSAATLK------AALELGVIDELTVAGLAEAAAEADLVIVAVPI   74 (279)
T ss_pred             cEEEEEC-CchHHHHHHHHHHHcCCeEEEEeecCcHHHHH------HHhhcCcccccccchhhhhcccCCEEEEeccH
Confidence            4565655 99999999999999999998888877643211      1112233332   1124455668999977654

>PRK14851 hypothetical protein; Provisional

Probab=95.57  E-value=0.15  Score=49.84  Aligned_cols=96  Identities=13%  Similarity=0.161  Sum_probs=61.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCC--------------------------CCeEEEEcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSE--------------------------GALELVYGDVT   54 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~--------------------------~~v~~~~~Dl~   54 (334)
                      +|+|.| .|.+|+.++..|...| -++++++.+.-...++..+                          -+++.+...++
T Consensus        45 ~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~~~~i~  123 (679)
T PRK14851         45 KVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPFPAGIN  123 (679)
T ss_pred             eEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEEecCCC
Confidence            699999 8999999999999998 4666666543222222211                          24666666665


Q ss_pred             ChhhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        55 d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                       .+.+.+.++++|+||.+.-.       .      .+..-..+.+.|.+. ++ .+|+.+
T Consensus       124 -~~n~~~~l~~~DvVid~~D~-------~------~~~~r~~l~~~c~~~-~i-P~i~~g  167 (679)
T PRK14851        124 -ADNMDAFLDGVDVVLDGLDF-------F------QFEIRRTLFNMAREK-GI-PVITAG  167 (679)
T ss_pred             -hHHHHHHHhCCCEEEECCCC-------C------cHHHHHHHHHHHHHC-CC-CEEEee
Confidence             45567788899999966421       0      111223566778876 44 466655

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=95.57  E-value=0.0053  Score=53.11  Aligned_cols=66  Identities=20%  Similarity=0.291  Sum_probs=45.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC----CCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE----GALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      +++|+|+ |.+|++++..|++.|++|.+++|+.++...+.+.    ..+...  ++.+     ....++|+||++.+.
T Consensus       119 ~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~--~~~~-----~~~~~~DivInatp~  188 (270)
T TIGR00507       119 RVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAF--SMDE-----LPLHRVDLIINATSA  188 (270)
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEe--chhh-----hcccCccEEEECCCC
Confidence            5899996 8999999999999999999999986554322111    111221  1111     123569999999976

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=95.57  E-value=0.012  Score=51.48  Aligned_cols=73  Identities=25%  Similarity=0.346  Sum_probs=52.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC-CCeEEEE-----cCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-GALELVY-----GDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~v~~~~-----~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |+|.|.| +|--|++|+..|.++|++|+.-.|+++....+... .+..+.+     -++.-..++.++++++|+|+-...
T Consensus         2 ~kI~ViG-aGswGTALA~~la~ng~~V~lw~r~~~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~iv~avP   80 (329)
T COG0240           2 MKIAVIG-AGSWGTALAKVLARNGHEVRLWGRDEEIVAEINETRENPKYLPGILLPPNLKATTDLAEALDGADIIVIAVP   80 (329)
T ss_pred             ceEEEEc-CChHHHHHHHHHHhcCCeeEEEecCHHHHHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEEEEECC
Confidence            6899999 78889999999999999999999986543322221 1233333     233344567888888998886654

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=95.56  E-value=0.018  Score=50.73  Aligned_cols=70  Identities=21%  Similarity=0.158  Sum_probs=51.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      +|+|+|+. .+|..-++.+...|.+|++++|++++.+...+...-.++..  .|.+....+-+.+|++|.+++
T Consensus       169 ~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~--~~~~~~~~~~~~~d~ii~tv~  238 (339)
T COG1064         169 WVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINS--SDSDALEAVKEIADAIIDTVG  238 (339)
T ss_pred             EEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEc--CCchhhHHhHhhCcEEEECCC
Confidence            58999955 99999999999999999999999987654333322333332  255555555555999999987

>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional

Probab=95.55  E-value=0.031  Score=51.55  Aligned_cols=71  Identities=20%  Similarity=0.166  Sum_probs=47.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEE---------cCCCChhhHHHHhcCCCEEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVY---------GDVTDYRSLVDACFGCHVIFH   71 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~---------~Dl~d~~~~~~~~~~~d~vih   71 (334)
                      |||-|.| .|++|..++..|.+ |++|+++++++.+.+.+... ...+.+         +.+.- ....+.++++|++|-
T Consensus         7 mkI~vIG-lGyvGlpmA~~la~-~~~V~g~D~~~~~ve~l~~G-~~~~~e~~~~~l~~~g~l~~-t~~~~~~~~advvii   82 (425)
T PRK15182          7 VKIAIIG-LGYVGLPLAVEFGK-SRQVVGFDVNKKRILELKNG-VDVNLETTEEELREARYLKF-TSEIEKIKECNFYII   82 (425)
T ss_pred             CeEEEEC-cCcchHHHHHHHhc-CCEEEEEeCCHHHHHHHHCc-CCCCCCCCHHHHHhhCCeeE-EeCHHHHcCCCEEEE
Confidence            8899997 89999999999877 69999999998766554421 111111         01100 111234678999998


Q ss_pred             eccc
Q 019878           72 TAAL   75 (334)
Q Consensus        72 ~a~~   75 (334)
                      |.+-
T Consensus        83 ~Vpt   86 (425)
T PRK15182         83 TVPT   86 (425)
T ss_pred             EcCC
Confidence            8764

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.54  E-value=0.042  Score=48.74  Aligned_cols=71  Identities=20%  Similarity=0.122  Sum_probs=47.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCCh--hhHHHHh-cCCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY--RSLVDAC-FGCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~--~~~~~~~-~~~d~vih~a~   74 (334)
                      +|||.|++|.+|..+++.+...|.+|+++++++++.+.+... ++..+ .|..+.  +.+.... .++|+|+++.+
T Consensus       149 ~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~-g~~~v-~~~~~~~~~~~~~~~~~~~d~vld~~g  222 (326)
T cd08289         149 PVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKKL-GAKEV-IPREELQEESIKPLEKQRWAGAVDPVG  222 (326)
T ss_pred             EEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHc-CCCEE-EcchhHHHHHHHhhccCCcCEEEECCc
Confidence            589999999999999999999999999998887654433221 22222 122222  2222222 24899998876

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.53  E-value=0.03  Score=49.86  Aligned_cols=61  Identities=16%  Similarity=0.165  Sum_probs=46.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |+|.|.| .|-||+.+++.|...|.+|++.+|++.....     .++       -..++.++++++|+|+-+..
T Consensus       147 ~~VgIIG-~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~-----~~~-------~~~~l~ell~~aDiVil~lP  207 (330)
T PRK12480        147 MTVAIIG-TGRIGAATAKIYAGFGATITAYDAYPNKDLD-----FLT-------YKDSVKEAIKDADIISLHVP  207 (330)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCChhHhhh-----hhh-------ccCCHHHHHhcCCEEEEeCC
Confidence            6799998 8999999999999999999999988653211     111       12346788889998887764

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=95.50  E-value=0.012  Score=54.28  Aligned_cols=68  Identities=21%  Similarity=0.305  Sum_probs=49.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      +|+|.| +|-+|..+++.|...| .+|++++|+.++...+...-+...+     +.+++.+.+.++|+||.+.+.
T Consensus       182 ~VlViG-aG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i-----~~~~l~~~l~~aDvVi~aT~s  250 (417)
T TIGR01035       182 KALLIG-AGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAV-----KFEDLEEYLAEADIVISSTGA  250 (417)
T ss_pred             EEEEEC-ChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEe-----eHHHHHHHHhhCCEEEECCCC
Confidence            689999 5999999999999999 7899999987654322211011222     234567777889999998764

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=95.50  E-value=0.011  Score=51.95  Aligned_cols=65  Identities=23%  Similarity=0.318  Sum_probs=47.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |+|.|.| .|.+|+.+++.|.+.|++|.+.+|++.+...+... ++.       -.+++.++++++|+||-+..
T Consensus         3 ~~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~-g~~-------~~~~~~e~~~~~d~vi~~vp   67 (296)
T PRK11559          3 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAA-GAE-------TASTAKAVAEQCDVIITMLP   67 (296)
T ss_pred             ceEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-CCe-------ecCCHHHHHhcCCEEEEeCC
Confidence            6899998 89999999999999999999999987653322211 121       11234556678999998764

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=95.49  E-value=0.053  Score=48.20  Aligned_cols=95  Identities=12%  Similarity=0.109  Sum_probs=59.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHH---Hh--cCCCEEEEecccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD---AC--FGCHVIFHTAALV   76 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~---~~--~~~d~vih~a~~~   76 (334)
                      +++|+|++|.+|..+++.+...|.+|+++++++.+...+... .... ..|..+.+....   ..  .++|.++++++..
T Consensus       169 ~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i~~~g~~  246 (342)
T cd08266         169 TVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKEL-GADY-VIDYRKEDFVREVRELTGKRGVDVVVEHVGAA  246 (342)
T ss_pred             EEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc-CCCe-EEecCChHHHHHHHHHhCCCCCcEEEECCcHH
Confidence            589999999999999999999999999998876543222111 1111 124444333222   22  2489999998731


Q ss_pred             CCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccc
Q 019878           77 EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF  117 (334)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~  117 (334)
                                      .....++..+..   .+++.+|+..
T Consensus       247 ----------------~~~~~~~~l~~~---G~~v~~~~~~  268 (342)
T cd08266         247 ----------------TWEKSLKSLARG---GRLVTCGATT  268 (342)
T ss_pred             ----------------HHHHHHHHhhcC---CEEEEEecCC
Confidence                            112344444443   3899888653

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.48  E-value=0.017  Score=51.06  Aligned_cols=72  Identities=17%  Similarity=0.147  Sum_probs=46.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC----------CCe--EEEEcCCCChhhHHHHhcCCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE----------GAL--ELVYGDVTDYRSLVDACFGCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----------~~v--~~~~~Dl~d~~~~~~~~~~~d~v   69 (334)
                      +|.|.| +|.+|+.++..|+..|++|++.+++++........          .+.  ......+.-..++.++++++|.|
T Consensus         9 ~VaVIG-aG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aDlV   87 (321)
T PRK07066          9 TFAAIG-SGVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADADFI   87 (321)
T ss_pred             EEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCCEE
Confidence            588998 79999999999999999999999986532210000          000  00001112223466778899999


Q ss_pred             EEecc
Q 019878           70 FHTAA   74 (334)
Q Consensus        70 ih~a~   74 (334)
                      |-+..
T Consensus        88 iEavp   92 (321)
T PRK07066         88 QESAP   92 (321)
T ss_pred             EECCc
Confidence            98764

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=95.47  E-value=0.13  Score=43.49  Aligned_cols=86  Identities=28%  Similarity=0.249  Sum_probs=51.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC-CeEE-EEEcCCCCCCCC--CCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG-HSVR-ALVRRTSDISGL--PSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g-~~V~-~~~r~~~~~~~~--~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~   76 (334)
                      |||.|.|++|-.|+.+++.+.+.+ .++. +++|.++....-  .....+.....-+.+  ++.....++|++|.+-.+ 
T Consensus         3 iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~~~~g~d~ge~~g~~~~gv~v~~--~~~~~~~~~DV~IDFT~P-   79 (266)
T COG0289           3 IKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGSLSLGSDAGELAGLGLLGVPVTD--DLLLVKADADVLIDFTTP-   79 (266)
T ss_pred             ceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCccccccchhhhccccccCceeec--chhhcccCCCEEEECCCc-
Confidence            799999999999999999999865 5544 445554322100  000001111111111  144555679999988542 


Q ss_pred             CCCCCCcccchhhhhHHHHHHHHHHHhc
Q 019878           77 EPWLPDPSRFFAVNVEGLKNVVQAAKET  104 (334)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~  104 (334)
                                     .++...++.|.++
T Consensus        80 ---------------~~~~~~l~~~~~~   92 (266)
T COG0289          80 ---------------EATLENLEFALEH   92 (266)
T ss_pred             ---------------hhhHHHHHHHHHc
Confidence                           2456778888887

>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively

Probab=95.45  E-value=0.072  Score=46.19  Aligned_cols=31  Identities=29%  Similarity=0.423  Sum_probs=26.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcC
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRR   33 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~   33 (334)
                      ||||.| .|.+|+.+++.|...| .++++++.+
T Consensus         1 kVLIvG-aGGLGs~vA~~La~aGVg~ItlvD~D   32 (307)
T cd01486           1 KCLLLG-AGTLGCNVARNLLGWGVRHITFVDSG   32 (307)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCC
Confidence            689998 8899999999999998 467777654

This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=95.44  E-value=0.0097  Score=54.55  Aligned_cols=71  Identities=13%  Similarity=0.180  Sum_probs=51.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~   76 (334)
                      .+|||.| +|-.|+.+++.|.+.| .+++++.|+..+...+...  ..  .+.....+++.+.+.++|+||++-+..
T Consensus       182 kkvlviG-aG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~--~~--~~~~~~~~~l~~~l~~aDiVI~aT~a~  253 (414)
T PRK13940        182 KNVLIIG-AGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSA--FR--NASAHYLSELPQLIKKADIIIAAVNVL  253 (414)
T ss_pred             CEEEEEc-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH--hc--CCeEecHHHHHHHhccCCEEEECcCCC
Confidence            3699999 5999999999999998 5799999987655443321  10  012233456678889999999998753

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=95.41  E-value=0.04  Score=37.77  Aligned_cols=35  Identities=29%  Similarity=0.537  Sum_probs=31.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~   37 (334)
                      ||+|.| +|++|-.++..|.+.|.+|+++.|++...
T Consensus         1 ~vvViG-gG~ig~E~A~~l~~~g~~vtli~~~~~~~   35 (80)
T PF00070_consen    1 RVVVIG-GGFIGIELAEALAELGKEVTLIERSDRLL   35 (80)
T ss_dssp             EEEEES-SSHHHHHHHHHHHHTTSEEEEEESSSSSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHhCcEEEEEeccchhh
Confidence            578888 89999999999999999999999998754

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=95.40  E-value=0.011  Score=54.60  Aligned_cols=69  Identities=20%  Similarity=0.318  Sum_probs=49.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      ++|+|.| +|-+|..+++.|...|. +|++.+|+.++...+...-+     ++..+.+.+.+.+.++|+||.+.+.
T Consensus       183 ~~vlViG-aG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g-----~~~~~~~~~~~~l~~aDvVI~aT~s  252 (423)
T PRK00045        183 KKVLVIG-AGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFG-----GEAIPLDELPEALAEADIVISSTGA  252 (423)
T ss_pred             CEEEEEC-chHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC-----CcEeeHHHHHHHhccCCEEEECCCC
Confidence            4699998 59999999999999996 79999998765432221101     1222345566777889999998764

>COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism]

Probab=95.40  E-value=0.018  Score=50.72  Aligned_cols=34  Identities=47%  Similarity=0.679  Sum_probs=32.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~   35 (334)
                      |||+|.| +|-+|+.++-.|.+.|++|..+.|++.
T Consensus         1 mkI~IlG-aGAvG~l~g~~L~~~g~~V~~~~R~~~   34 (307)
T COG1893           1 MKILILG-AGAIGSLLGARLAKAGHDVTLLVRSRR   34 (307)
T ss_pred             CeEEEEC-CcHHHHHHHHHHHhCCCeEEEEecHHH
Confidence            8999999 999999999999999999999999875

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=95.39  E-value=0.065  Score=47.10  Aligned_cols=68  Identities=19%  Similarity=0.243  Sum_probs=45.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |+|.|.| .|-+|+.+++.|++.|++|++.+|++++...+... +++.    ..+++++.+..+++|+|+-+..
T Consensus         1 m~Ig~IG-lG~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~-g~~~----~~s~~~~~~~~~~advVi~~vp   68 (299)
T PRK12490          1 MKLGLIG-LGKMGGNMAERLREDGHEVVGYDVNQEAVDVAGKL-GITA----RHSLEELVSKLEAPRTIWVMVP   68 (299)
T ss_pred             CEEEEEc-ccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHC-CCee----cCCHHHHHHhCCCCCEEEEEec
Confidence            8899998 99999999999999999999999987654333221 2211    1133333322233688877653

>TIGR00877 purD phosphoribosylamine--glycine ligase

Probab=95.39  E-value=0.029  Score=51.95  Aligned_cols=68  Identities=21%  Similarity=0.107  Sum_probs=45.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcC--CCEEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFH   71 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vih   71 (334)
                      |||+|+| +|..|..|++.+.+.|+.+.++..+........  ....++..|..|.+.+.+..++  +|.||-
T Consensus         1 ~kiliiG-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~~l~~~~~~~~id~vi~   70 (423)
T TIGR00877         1 MKVLVIG-NGGREHALAWKLAQSPLVKYVYVAPGNAGTARL--AKNKNVAISITDIEALVEFAKKKKIDLAVI   70 (423)
T ss_pred             CEEEEEC-CChHHHHHHHHHHhCCCccEEEEECCCHHHhhh--cccccccCCCCCHHHHHHHHHHhCCCEEEE
Confidence            8999999 566699999999998765555533322111111  1234556799999988887764  777773

This enzyme appears as a monofunctional protein in prokaryotes but as part of a larger, multidomain protein in eukaryotes.

>cd01493 APPBP1_RUB Ubiquitin activating enzyme (E1) subunit APPBP1

Probab=95.38  E-value=0.2  Score=46.11  Aligned_cols=102  Identities=14%  Similarity=0.078  Sum_probs=60.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCC------------------------C--CeEEEEcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSE------------------------G--ALELVYGDVT   54 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~------------------------~--~v~~~~~Dl~   54 (334)
                      +|+|.|++ .+|..+++.|.-.|. ++++++.+.-....+...                        +  +++++..++.
T Consensus        22 ~VlliG~g-glGsEilKNLvL~GIg~~tIvD~~~V~~sDL~~nFfl~~~diGk~kA~~~~~~L~eLNp~V~i~~~~e~~~  100 (425)
T cd01493          22 HVCLLNAT-ATGTEILKNLVLPGIGSFTIVDGSKVDEEDLGNNFFLDASSLGKSRAEATCELLQELNPDVNGSAVEESPE  100 (425)
T ss_pred             eEEEEcCc-HHHHHHHHHHHHcCCCeEEEECCCcCchhhccccccCChhhcCcHHHHHHHHHHHHHCCCCEEEEEecccc
Confidence            69999855 599999999999994 678877654322222110                        1  2233333332


Q ss_pred             Chh-hHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceecc
Q 019878           55 DYR-SLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS  121 (334)
Q Consensus        55 d~~-~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~  121 (334)
                      +.. ...+.+.++|+||-+-               .+......+.+.|.+. + ..+|+++|.+.||.
T Consensus       101 ~ll~~~~~f~~~fdiVI~t~---------------~~~~~~~~L~~~c~~~-~-iPlI~~~s~G~~G~  151 (425)
T cd01493         101 ALLDNDPSFFSQFTVVIATN---------------LPESTLLRLADVLWSA-N-IPLLYVRSYGLYGY  151 (425)
T ss_pred             hhhhhHHHHhcCCCEEEECC---------------CCHHHHHHHHHHHHHc-C-CCEEEEecccCEEE
Confidence            211 1233445566666321               1223334577888887 3 48999999998884

APPBP1 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. ABPP1 contains part of the adenylation domain.

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=95.36  E-value=0.0089  Score=52.02  Aligned_cols=71  Identities=18%  Similarity=0.152  Sum_probs=47.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCC--CeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEG--ALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~--~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      +++|.| +|..|++++..|.+.|. +|+++.|+.++...+.+.-  .....  .+...+++...+.++|+|||+-+.
T Consensus       127 ~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~--~~~~~~~~~~~~~~~DiVInaTp~  200 (282)
T TIGR01809       127 RGLVIG-AGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVIT--RLEGDSGGLAIEKAAEVLVSTVPA  200 (282)
T ss_pred             eEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcce--eccchhhhhhcccCCCEEEECCCC
Confidence            589998 69999999999999995 7999999876654432210  00111  111223344556789999999765

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.34  E-value=0.38  Score=44.92  Aligned_cols=31  Identities=26%  Similarity=0.201  Sum_probs=27.9

Q ss_pred             EEcCCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 019878            5 VSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (334)
Q Consensus         5 ItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~   35 (334)
                      |+||+|-+|.++++.|...|.+|++..+.+.
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~   73 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDGGL   73 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCcccc
Confidence            8888999999999999999999999876655

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=95.33  E-value=0.012  Score=51.61  Aligned_cols=64  Identities=17%  Similarity=0.176  Sum_probs=46.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      +|.|.| .|.+|+.+++.|++.|++|++.+|++++...+... +.       ....+..++++++|+||-+..
T Consensus         1 ~IgvIG-~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~-g~-------~~~~~~~~~~~~aDivi~~vp   64 (291)
T TIGR01505         1 KVGFIG-LGIMGSPMSINLAKAGYQLHVTTIGPEVADELLAA-GA-------VTAETARQVTEQADVIFTMVP   64 (291)
T ss_pred             CEEEEE-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-CC-------cccCCHHHHHhcCCEEEEecC
Confidence            578887 89999999999999999999999987654332221 11       112235567788999998864

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]

Probab=95.33  E-value=0.06  Score=44.17  Aligned_cols=67  Identities=13%  Similarity=0.154  Sum_probs=44.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC--CC-eEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ--GH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~--g~-~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      |+|.|.| +|.||..+++.+.+.  +. -+.+.+|+.++...+...    +   .......+.+.++.+|+++-+|+.
T Consensus         1 l~vgiVG-cGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~~~~~----~---~~~~~s~ide~~~~~DlvVEaAS~   70 (255)
T COG1712           1 LKVGIVG-CGAIGKFLLELVRDGRVDFELVAVYDRDEEKAKELEAS----V---GRRCVSDIDELIAEVDLVVEAASP   70 (255)
T ss_pred             CeEEEEe-ccHHHHHHHHHHhcCCcceeEEEEecCCHHHHHHHHhh----c---CCCccccHHHHhhccceeeeeCCH
Confidence            7899999 999999999998754  23 456667777765433221    1   111223345555778888888874

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.32  E-value=0.059  Score=46.57  Aligned_cols=52  Identities=23%  Similarity=0.306  Sum_probs=44.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      +|+|+|.++.+|+.++..|.++|.+|+++.++.                      ..+.+.+.++|+||.+.|.
T Consensus       160 ~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t----------------------~~l~~~~~~ADIVIsAvg~  211 (286)
T PRK14175        160 NAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS----------------------KDMASYLKDADVIVSAVGK  211 (286)
T ss_pred             EEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc----------------------hhHHHHHhhCCEEEECCCC
Confidence            699999999999999999999999999987642                      1356778899999999885

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=95.29  E-value=0.059  Score=48.17  Aligned_cols=70  Identities=16%  Similarity=0.150  Sum_probs=46.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCe-EEEEEcCCCCCCCCCCCCCeEEEEcCCCC--hhhHHHHhc--CCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHS-VRALVRRTSDISGLPSEGALELVYGDVTD--YRSLVDACF--GCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d--~~~~~~~~~--~~d~vih~a~   74 (334)
                      +|||+|+ |.+|..+++.+...|.+ |+++++++++.+.+.+. ++..+ .|..+  .+.+.+...  ++|+||++.+
T Consensus       166 ~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~-ga~~~-i~~~~~~~~~~~~~~~~~~~d~vid~~g  240 (339)
T cd08239         166 TVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAKAL-GADFV-INSGQDDVQEIRELTSGAGADVAIECSG  240 (339)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-CCCEE-EcCCcchHHHHHHHhCCCCCCEEEECCC
Confidence            6899985 99999999999999988 99888876554322221 22222 23333  333444443  5899999987

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.29  E-value=0.088  Score=46.75  Aligned_cols=96  Identities=17%  Similarity=0.122  Sum_probs=57.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCe-EEEEcCCCCh-hhHHHHh-cCCCEEEEeccccCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGAL-ELVYGDVTDY-RSLVDAC-FGCHVIFHTAALVEP   78 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v-~~~~~Dl~d~-~~~~~~~-~~~d~vih~a~~~~~   78 (334)
                      +|+|.|++|.+|..+++.+...|.+|+++++++.+.+.+... ++ .++..+-.+. ..+.... .++|.|+++.|.   
T Consensus       142 ~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~-g~~~v~~~~~~~~~~~~~~~~~~~vd~v~~~~g~---  217 (329)
T cd08250         142 TVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSL-GCDRPINYKTEDLGEVLKKEYPKGVDVVYESVGG---  217 (329)
T ss_pred             EEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHc-CCceEEeCCCccHHHHHHHhcCCCCeEEEECCcH---
Confidence            599999999999999999999999999998876543332221 12 1222111111 1122222 348999988762   


Q ss_pred             CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccc
Q 019878           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF  117 (334)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~  117 (334)
                                   ......++.+..   ..++|.+++..
T Consensus       218 -------------~~~~~~~~~l~~---~g~~v~~g~~~  240 (329)
T cd08250         218 -------------EMFDTCVDNLAL---KGRLIVIGFIS  240 (329)
T ss_pred             -------------HHHHHHHHHhcc---CCeEEEEeccc
Confidence                         012233444433   34899888654

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein

Probab=95.28  E-value=0.21  Score=47.40  Aligned_cols=104  Identities=21%  Similarity=0.227  Sum_probs=69.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCC-----------CCCCeEEEEcCCCChhhHHHHhcCCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLP-----------SEGALELVYGDVTDYRSLVDACFGCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~-----------~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   69 (334)
                      ||+|.| .|-+|++++..|+..| .++++++-+.. ..++.           ..+++.+...|..+.+.+.+.++++|+|
T Consensus       131 kVlVlG-~Gg~~s~lv~sL~~sG~~~I~~vd~D~v-~SNlnRIgEl~e~A~~~n~~v~v~~i~~~~~~dl~ev~~~~DiV  208 (637)
T TIGR03693       131 KILAAG-SGDFLTKLVRSLIDSGFPRFHAIVTDAE-EHALDRIHELAEIAEETDDALLVQEIDFAEDQHLHEAFEPADWV  208 (637)
T ss_pred             cEEEEe-cCchHHHHHHHHHhcCCCcEEEEecccc-chhhhHHHHHHHHHHHhCCCCceEeccCCcchhHHHhhcCCcEE
Confidence            699999 8889999999999999 56666644332 11111           0135666666777888999999999999


Q ss_pred             EEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcE--EEEecccceecc
Q 019878           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEK--IIYTSSFFALGS  121 (334)
Q Consensus        70 ih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~v~~Ss~~v~~~  121 (334)
                      |+++-.       +      +......+.++|.+. +...  ++..++....|+
T Consensus       209 i~vsDd-------y------~~~~Lr~lN~acvke-gk~~IPai~~G~~~liGP  248 (637)
T TIGR03693       209 LYVSDN-------G------DIDDLHALHAFCKEE-GKGFIPAICLKQVGLAGP  248 (637)
T ss_pred             EEECCC-------C------ChHHHHHHHHHHHHc-CCCeEEEEEcccceeecc
Confidence            999742       1      222345677777776 3332  444444444443

Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	334
2c29_D	337	Structure Of Dihydroflavonol Reductase From Vitis V		1e-15
2x4g_A	342	Crystal Structure Of Pa4631, A Nucleoside-Diphospha		2e-15
2p4h_X	322	Crystal Structure Of Vestitone Reductase From Alfal		5e-15
2rh8_A	338	Structure Of Apo Anthocyanidin Reductase From Vitis		2e-14
4id9_A	347	Crystal Structure Of A Short-Chain DehydrogenaseRED		3e-10
3aw9_A	308	Structure Of Udp-Galactose 4-Epimerase Mutant Lengt		2e-09
3icp_A	312	Crystal Structure Of Udp-Galactose 4-Epimerase Leng		3e-08
1orr_A	347	Crystal Structure Of Cdp-tyvelose 2-epimerase Compl		7e-08
1sb8_A	352	Crystal Structure Of Pseudomonas Aeruginosa Udp-N-A		4e-07
2udp_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		8e-07
1lrj_A	338	Crystal Structure Of E. Coli Udp-Galactose 4-Epimer		1e-06
1lrk_A	338	Crystal Structure Of Escherichia Coli Udp-Galactose		1e-06
1kvr_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		2e-06
1kvu_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		2e-06
1kvs_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		2e-06
1kvq_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		3e-06
1a9y_A	338	Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX		4e-06
1r6d_A	337	Crystal Structure Of Desiv Double Mutant (Dtdp-Gluc		4e-06
4f6l_B	508	Crystal Structure Of Aureusimine Biosynthetic Clust		5e-06
1r66_A	337	Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydr		5e-06
1qyc_A	308	Crystal Structures Of Pinoresinol-Lariciresinol And		5e-06
1kep_A	348	The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydra		5e-06
1kvt_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		6e-06
1a9z_A	338	Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX		7e-06
2pzk_A	330	Crystal Structure Of The Bordetella Bronchiseptica		2e-05
4egb_A	346	3.0 Angstrom Resolution Crystal Structure Of Dtdp-G		3e-05
3sxp_A	362	Crystal Structure Of Helicobacter Pylori Adp-L-Glyc		4e-05
4ef7_B	337	Udp-Xylose Synthase Length = 337		8e-05
4f6c_A	427	Crystal Structure Of Aureusimine Biosynthetic Clust		1e-04
3slg_A	372	Crystal Structure Of Pbgp3 Protein From Burkholderi		2e-04
3vps_A	321	Structure Of A Novel Nad Dependent-Ndp-Hexosamine 5		4e-04
3a1n_A	317	Crystal Structure Of L-Threonine Dehydrogenase From		5e-04
3a9w_A	317	Crystal Structure Of L-Threonine Bound L-Threonine		5e-04

>pdb|2C29|D Chain D, Structure Of Dihydroflavonol Reductase From Vitis Vinifera At 1.8 A. Length = 337

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 130/278 (46%), Gaps = 27/278 (9%)
Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS------GLP-SEGALELVYGDVTD 55
           + V+GASG++G  L   LL++G++VRA VR  +++        LP +E  L L   D+ D
Sbjct: 8   VCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLAD 67
Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
             S  +A  GC  +FH A  ++    DP +      +EG+  ++++    KTV ++++TS
Sbjct: 68  EGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTS 127
Query: 115 SFFALGSTDGYI--------ADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPIVP 165
           S   +   +  +        +D      +K     Y  SK +A++ A + A E  +  + 
Sbjct: 128 SAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFIT 187
Query: 166 VYPGVIYGPGKLTT--GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAME 223
           + P ++ GP  +++   +L+  L     N      I  G     F H+DD+ + HI   E
Sbjct: 188 IIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQ----FVHLDDLCNAHIYLFE 243
Query: 224 KGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIP 261
             ++  RY+ +  +     I D+A ++     P + IP
Sbjct: 244 NPKAEGRYICSSHDCI---ILDLAKMLR-EKYPEYNIP 277

>pdb|2X4G|A Chain A, Crystal Structure Of Pa4631, A Nucleoside-Diphosphate-Sugar Epimerase From Pseudomonas Aeruginosa Length = 342

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 143/338 (42%), Gaps = 21/338 (6%)
Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           +K  V GA+G LG     A+   GH +  + R +S I  L +    E    ++ D+  L 
Sbjct: 14  VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL-AYLEPECRVAEMLDHAGLE 72
Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA-- 118
            A  G   +  +A    P  P   +    +  G  N   AA     V +I+Y  S +A  
Sbjct: 73  RALRGLDGVIFSAGYY-PSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMP 131
Query: 119 -----LGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYG 173
                L   +G   D     +  Y   ++       D+ A + A  GLP+V   PG++ G
Sbjct: 132 RHPQGLPGHEGLFYDSLPSGKSSYVLCKW-----ALDEQAREQARNGLPVVIGIPGMVLG 186
Query: 174 PGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLL 233
             +L  G    +++    NG +  Y+     + +     +   G + A+E+GR GERYLL
Sbjct: 187 --ELDIGPTTGRVITAIGNGEMTHYVA---GQRNVIDAAEAGRGLLMALERGRIGERYLL 241
Query: 234 TGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVL 293
           TG N     +    A + G   P+  + + +  A   +     R++G+LPL+    + V+
Sbjct: 242 TGHNLEMADLTRRIAELLGQPAPQ-PMSMAMARALATLGRLRYRVSGQLPLLDETAIEVM 300
Query: 294 AHQWAYSCVKAKTELG-YNPRSLKEGLQEVLPWLRSSG 330
           A        KA+ ELG ++  +L + L   + W R +G
Sbjct: 301 AGGQFLDGRKAREELGFFSTTALDDTLLRAIDWFRDNG 338

>pdb|2P4H|X Chain X, Crystal Structure Of Vestitone Reductase From Alfalfa (Medicago Sativa L.) Length = 322

Iteration: 1
 Score = 78.6 bits (192), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 119/253 (47%), Gaps = 31/253 (12%)
Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVR----RTSDISGLPS-EGALELVY---GDV 53
           ++ V+G +G+LG  +  +LL+ G+SV   +R    R  D+S L +  GA E ++    D+
Sbjct: 3   RVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADL 62
Query: 54  TDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAV-NVEGLKNVVQAAKETKTVEKIIY 112
           ++  S   A  GC  IFHTA+ ++  + +P        V+G   +++A   +KTV++ IY
Sbjct: 63  SNPDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIY 122
Query: 113 TSSFFAL--GSTDGYIADENQ------VHEEKYFCTQYERSKAVADKIALQAASE-GLPI 163
           TSS  A+     D  + DE+       +   K F   Y  SK +A+K  L+   + G+ +
Sbjct: 123 TSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGIDV 182
Query: 164 VP-VYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIG----YGNDRFSFCHVDDVVDGH 218
           V  + P ++        G  V   + +     L   +G     G  RF   HVDDV   H
Sbjct: 183 VTLILPFIV--------GRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAH 234
Query: 219 IAAMEKGRSGERY 231
           I  +E    G RY
Sbjct: 235 IYLLENSVPGGRY 247

>pdb|2RH8|A Chain A, Structure Of Apo Anthocyanidin Reductase From Vitis Vinifera Length = 338

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 122/290 (42%), Gaps = 47/290 (16%)
Query: 5   VSGASGYLGGRLCHALLKQGHSVRALVR------RTSDISGLPSEGALELVYGDVTDYRS 58
           V G +G++   L   LL++G++V   VR      + S +  L   G L++   D+TD  S
Sbjct: 14  VVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELS 73
Query: 59  LVDACFGCHVIFHTAALVEPWLPDPSR-FFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
                 GC  +FH A  V     DP        ++G+ NV++A    K+V+++I TSS  
Sbjct: 74  FEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAA 133
Query: 118 ALGSTD----GYIADENQVHEEKYFCTQ------YERSKAVADKIALQAASEG-LPIVPV 166
           A+        G + DE    + ++  +       Y  SK +A+K A + A E  + ++ V
Sbjct: 134 AVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEENNIDLITV 193
Query: 167 YPGVIYGPG-------------KLTTGNLVAKLMIERFNGR--LPGYIGYGNDRFSFCHV 211
            P ++ G                L TGN   + +I    G   L G +       S  HV
Sbjct: 194 IPTLMAGSSLTSDVPSSIGLAMSLITGN---EFLINGMKGMQMLSGSV-------SIAHV 243
Query: 212 DDVVDGHIAAMEKGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIP 261
           +DV   HI   EK  +  RY+    N S  ++    A       P++ +P
Sbjct: 244 EDVCRAHIFVAEKESASGRYICCAANTSVPEL----AKFLSKRYPQYKVP 289

>pdb|4ID9|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SUPERFAMILY Protein From Agrobacterium Tumefaciens (Target Efi-506441) With Bound Nad, Monoclinic Form 1 Length = 347

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 58/114 (50%), Gaps = 10/114 (8%)
Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           ILV+G++G +G  +  AL  QG +VR    R S   G       E V G + D ++L DA
Sbjct: 22  ILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSGTGG-------EEVVGSLEDGQALSDA 74
Query: 63  CFGCHVIFHTAALVEPWLP-DPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
             G   + H  A +  W P D  R FAVNVEG + ++ AA     V + ++ SS
Sbjct: 75  IMGVSAVLHLGAFMS-WAPADRDRMFAVNVEGTRRLLDAAS-AAGVRRFVFASS 126

>pdb|3AW9|A Chain A, Structure Of Udp-Galactose 4-Epimerase Mutant Length = 308

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 117/255 (45%), Gaps = 17/255 (6%)
Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           M+I+V+G +G++G  L   L++ G+ V  +     DI    + G+ EL   D+ DY    
Sbjct: 1   MRIVVTGGAGFIGSHLVDKLVELGYEVVVV-----DIVQRDTGGSAELHVRDLKDYSW-- 53
Query: 61  DACFGCHVIFHTAALVEPWLP--DPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA 118
            A     V+FH AA  E  L   +P   F  NV    NV++ A++T  V  +++ SS   
Sbjct: 54  GAGIKGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTG-VRTVVFASSSTV 112
Query: 119 LGSTDGYIADENQVHEEKYFCTQYERSKAVADKI-ALQAASEGLPIVPVYPGVIYGPGKL 177
            G  D     E + ++     + Y  +KA  + + A  A   G+  + V    + GP +L
Sbjct: 113 YGDADVIPTPEEEPYKP---ISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGP-RL 168
Query: 178 TTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTGE- 236
             G +   +M  R N  +   +G G  R S+ +V D V+  +AA +K    +   L    
Sbjct: 169 RHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNV 228
Query: 237 -NASFMQIFDMAAVI 250
            N   +++ D+A ++
Sbjct: 229 GNVDAVRVLDIAQIV 243

>pdb|3ICP|A Chain A, Crystal Structure Of Udp-Galactose 4-Epimerase Length = 312

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 116/255 (45%), Gaps = 13/255 (5%)
Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           M+I+V+G +G++G  L   L++ G+ V  +   +S      +  A EL   D+ DY    
Sbjct: 1   MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSA-ELHVRDLKDYSW-- 57
Query: 61  DACFGCHVIFHTAALVEPWLP--DPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA 118
            A     V+FH AA  E  L   +P   F  NV    NV++ A++T  V  +++ SS   
Sbjct: 58  GAGIKGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTG-VRTVVFASSSTV 116
Query: 119 LGSTDGYIADENQVHEEKYFCTQYERSKAVADKI-ALQAASEGLPIVPVYPGVIYGPGKL 177
            G  D     E + ++     + Y  +KA  + + A  A   G+  + V    + GP +L
Sbjct: 117 YGDADVIPTPEEEPYKP---ISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGP-RL 172
Query: 178 TTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTGE- 236
             G +   +M  R N  +   +G G  R S+ +V D V+  +AA +K    +   L    
Sbjct: 173 RHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNV 232
Query: 237 -NASFMQIFDMAAVI 250
            N   +++ D+A ++
Sbjct: 233 GNVDAVRVLDIAQIV 247

>pdb|1ORR|A Chain A, Crystal Structure Of Cdp-tyvelose 2-epimerase Complexed With Nad And Cdp Length = 347

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 86/208 (41%), Gaps = 37/208 (17%)
Query: 2   KILVSGASGYLGGRLCHALLKQGHSV---RALVRR--TSDISGLPSEGALELVYGDVTDY 56
           K+L++G  G+LG  L    L QG  +     L R+  T ++  L S G  E V+GD+ + 
Sbjct: 3   KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNK 62
Query: 57  RSLV--------DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVE 108
             +         D+CF  H+    A      + +P   F +NV G  N+++A ++  +  
Sbjct: 63  NDVTRLITKYMPDSCF--HLAGQVAMTTS--IDNPCMDFEINVGGTLNLLEAVRQYNSNC 118
Query: 109 KIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ----------------YERSKAVADKI 152
            IIY+S+    G  + Y  +E    E +Y C                  Y  SK  AD+ 
Sbjct: 119 NIIYSSTNKVYGDLEQYKYNET---ETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQY 175
Query: 153 ALQAAS-EGLPIVPVYPGVIYGPGKLTT 179
            L  A   GL  V      +YG  +  T
Sbjct: 176 MLDYARIFGLNTVVFRHSSMYGGRQFAT 203

>pdb|1SB8|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Udp-N-Acetylglucosamine 4- Epimerase Complexed With Udp-N-Acetylgalactosamine Length = 352

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 15/153 (9%)
Query: 4   LVSGASGYLGGRLCHALLKQGHSVRAL-------VRRTSDISGLPSE---GALELVYGDV 53
           L++G +G++G  L   LLK    V  L        R   ++  L SE      + + GD+
Sbjct: 31  LITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDI 90
Query: 54  TDYRSLVDACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKII 111
            +     +AC G   + H AAL  V   + DP    A N++G  N++ AA++ K V+   
Sbjct: 91  RNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFT 149
Query: 112 YTSSFFALGSTDGYIADENQVHE--EKYFCTQY 142
           Y +S    G   G    E+ + +    Y  T+Y
Sbjct: 150 YAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKY 182

>pdb|2UDP|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 105/258 (40%), Gaps = 43/258 (16%)
Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRR-TSDISGLPSEGAL-----ELVYGDVT 54
           M++LV+G SGY+G   C  LL+ GH V  L     S  S LP    L       V GD+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 55  DYRSLVDACFGCHVI---FHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEK 109
           +  +L+      H I    H A L  V   +  P  ++  NV G   ++ A +    V+ 
Sbjct: 61  N-EALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMR-AANVKN 118
Query: 110 IIYTSSFFALGSTDGYIADENQVHEEKYFCT-----QYERSKAVADKI--ALQAASEGLP 162
            I++SS    G       D+ ++   + F T      Y +SK + ++I   LQ A     
Sbjct: 119 FIFSSSATVYG-------DQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWS 171
Query: 163 I--------VPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFS------- 207
           I        V  +P    G       N +   + +   GR      +GND  +       
Sbjct: 172 IALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVR 231
Query: 208 -FCHVDDVVDGHIAAMEK 224
            + HV D+ DGH+ AMEK
Sbjct: 232 DYIHVMDLADGHVVAMEK 249

>pdb|1LRJ|A Chain A, Crystal Structure Of E. Coli Udp-Galactose 4-Epimerase Complexed With Udp-N-Acetylglucosamine Length = 338

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 104/258 (40%), Gaps = 43/258 (16%)
Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRR-TSDISGLPSEGAL-----ELVYGDVT 54
           M++LV+G SGY+G   C  LL+ GH V  L     S  S LP    L       V GD+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 55  DYRSLVDACFGCHVI---FHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEK 109
           +  +L+      H I    H A L  V   +  P  ++  NV G   ++ A +    V+ 
Sbjct: 61  N-EALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMR-AANVKN 118
Query: 110 IIYTSSFFALGSTDGYIADENQVHEEKYFCT-----QYERSKAVADKI--ALQAASEGLP 162
            I++SS    G       D  ++   + F T      Y +SK + ++I   LQ A     
Sbjct: 119 FIFSSSATVYG-------DNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWS 171
Query: 163 I--------VPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFS------- 207
           I        V  +P    G       N +   + +   GR      +GND  +       
Sbjct: 172 IALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVR 231
Query: 208 -FCHVDDVVDGHIAAMEK 224
            + HV D+ DGH+ AMEK
Sbjct: 232 DYIHVMDLADGHVVAMEK 249

>pdb|1LRK|A Chain A, Crystal Structure Of Escherichia Coli Udp-Galactose 4-Epimerase Mutant Y299c Complexed With Udp-N-Acetylglucosamine Length = 338

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 104/258 (40%), Gaps = 43/258 (16%)
Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRR-TSDISGLPSEGAL-----ELVYGDVT 54
           M++LV+G SGY+G   C  LL+ GH V  L     S  S LP    L       V GD+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 55  DYRSLVDACFGCHVI---FHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEK 109
           +  +L+      H I    H A L  V   +  P  ++  NV G   ++ A +    V+ 
Sbjct: 61  N-EALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMR-AANVKN 118
Query: 110 IIYTSSFFALGSTDGYIADENQVHEEKYFCT-----QYERSKAVADKI--ALQAASEGLP 162
            I++SS    G       D  ++   + F T      Y +SK + ++I   LQ A     
Sbjct: 119 FIFSSSATVYG-------DNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWS 171
Query: 163 I--------VPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFS------- 207
           I        V  +P    G       N +   + +   GR      +GND  +       
Sbjct: 172 IALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVR 231
Query: 208 -FCHVDDVVDGHIAAMEK 224
            + HV D+ DGH+ AMEK
Sbjct: 232 DYIHVMDLADGHVVAMEK 249

>pdb|1KVR|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 105/258 (40%), Gaps = 43/258 (16%)
Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRR-TSDISGLPSEGAL-----ELVYGDVT 54
           M++LV+G SGY+G   C  LL+ GH V  L     S  S LP    L       V GD+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 55  DYRSLVDACFGCHVI---FHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEK 109
           +  +L+      H I    H A L  V   +  P  ++  NV G   ++ A +    V+ 
Sbjct: 61  N-EALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMR-AANVKN 118
Query: 110 IIYTSSFFALGSTDGYIADENQVHEEKYFCT-----QYERSKAVADKI--ALQAASEGLP 162
            I++S+    G       D+ ++   + F T      Y +SK + ++I   LQ A     
Sbjct: 119 FIFSSAATVYG-------DQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWS 171
Query: 163 I--------VPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFS------- 207
           I        V  +P    G       N +   + +   GR      +GND  +       
Sbjct: 172 IALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVR 231
Query: 208 -FCHVDDVVDGHIAAMEK 224
            + HV D+ DGH+ AMEK
Sbjct: 232 DYIHVMDLADGHVVAMEK 249

>pdb|1KVU|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 105/258 (40%), Gaps = 43/258 (16%)
Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRR-TSDISGLPSEGAL-----ELVYGDVT 54
           M++LV+G SGY+G   C  LL+ GH V  L     S  S LP    L       V GD+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 55  DYRSLVDACFGCHVI---FHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEK 109
           +  +L+      H I    H A L  V   +  P  ++  NV G   ++ A +    V+ 
Sbjct: 61  N-EALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMR-AANVKN 118
Query: 110 IIYTSSFFALGSTDGYIADENQVHEEKYFCT-----QYERSKAVADKI--ALQAASEGLP 162
            I++SS    G       D+ ++   + F T      + +SK + ++I   LQ A     
Sbjct: 119 FIFSSSATVYG-------DQPKIPYVESFPTGTPQSPFGKSKLMVEQILTDLQKAQPDWS 171
Query: 163 I--------VPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFS------- 207
           I        V  +P    G       N +   + +   GR      +GND  +       
Sbjct: 172 IALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVR 231
Query: 208 -FCHVDDVVDGHIAAMEK 224
            + HV D+ DGH+ AMEK
Sbjct: 232 DYIHVMDLADGHVVAMEK 249

>pdb|1KVS|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 104/258 (40%), Gaps = 43/258 (16%)
Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRR-TSDISGLPSEGAL-----ELVYGDVT 54
           M++LV+G SGY+G   C  LL+ GH V  L     S  S LP    L       V GD+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 55  DYRSLVDACFGCHVI---FHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEK 109
           +  +L+      H I    H A L  V   +  P  ++  NV G   ++ A +    V+ 
Sbjct: 61  N-EALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMR-AANVKN 118
Query: 110 IIYTSSFFALGSTDGYIADENQVHEEKYFCT-----QYERSKAVADKI--ALQAASEGLP 162
            I++S+    G       D  ++   + F T      Y +SK + ++I   LQ A     
Sbjct: 119 FIFSSTATVYG-------DNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWS 171
Query: 163 I--------VPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFS------- 207
           I        V  +P    G       N +   + +   GR      +GND  +       
Sbjct: 172 IALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVR 231
Query: 208 -FCHVDDVVDGHIAAMEK 224
            + HV D+ DGH+ AMEK
Sbjct: 232 DYIHVMDLADGHVVAMEK 249

>pdb|1KVQ|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 104/258 (40%), Gaps = 43/258 (16%)
Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRR-TSDISGLPSEGAL-----ELVYGDVT 54
           M++LV+G SGY+G   C  LL+ GH V  L     S  S LP    L       V GD+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 55  DYRSLVDACFGCHVI---FHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEK 109
           +  +L+      H I    H A L  V   +  P  ++  NV G   ++ A +    V+ 
Sbjct: 61  N-EALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMR-AANVKN 118
Query: 110 IIYTSSFFALGSTDGYIADENQVHEEKYFCT-----QYERSKAVADKI--ALQAASEGLP 162
            I++S+    G       D  ++   + F T      Y +SK + ++I   LQ A     
Sbjct: 119 FIFSSAATVYG-------DNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWS 171
Query: 163 I--------VPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFS------- 207
           I        V  +P    G       N +   + +   GR      +GND  +       
Sbjct: 172 IALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVR 231
Query: 208 -FCHVDDVVDGHIAAMEK 224
            + HV D+ DGH+ AMEK
Sbjct: 232 DYIHVMDLADGHVVAMEK 249

>pdb|1A9Y|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Glucose Length = 338

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 105/258 (40%), Gaps = 43/258 (16%)
Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRR-TSDISGLPSEGAL-----ELVYGDVT 54
           M++LV+G SGY+G   C  LL+ GH V  L     S  S LP    L       V GD+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 55  DYRSLVDACFGCHVI---FHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEK 109
           +  +L+      H I    H A L  V   +  P  ++  NV G   ++ A +    V+ 
Sbjct: 61  N-EALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMR-AANVKN 118
Query: 110 IIYTSSFFALGSTDGYIADENQVHEEKYFCT-----QYERSKAVADKI--ALQAASEGLP 162
            I++S+    G       D+ ++   + F T      + +SK + ++I   LQ A     
Sbjct: 119 FIFSSAATVYG-------DQPKIPYVESFPTGTPQSPFGKSKLMVEQILTDLQKAQPDWS 171
Query: 163 I--------VPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFS------- 207
           I        V  +P    G       N +   + +   GR      +GND  +       
Sbjct: 172 IALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVR 231
Query: 208 -FCHVDDVVDGHIAAMEK 224
            + HV D+ DGH+ AMEK
Sbjct: 232 DYIHVMDLADGHVVAMEK 249

>pdb|1R6D|A Chain A, Crystal Structure Of Desiv Double Mutant (Dtdp-Glucose 4,6- Dehydratase) From Streptomyces Venezuelae With Nad And Dau Bound Length = 337

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 83/347 (23%), Positives = 140/347 (40%), Gaps = 51/347 (14%)
Query: 1   MKILVSGASGYLGGRLCHALLKQGH------SVRALVRRT-----SDISGLPSEGALELV 49
           M++LV+G +G++G      LL   +       V  L   T     ++++ + ++  L  V
Sbjct: 1   MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFV 60
Query: 50  YGDVTDYRSLVDACFGCHVIFHTAA--LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV 107
           +GD+ D   L     G   I H AA   V+  +   S F   NV+G + ++Q A +   V
Sbjct: 61  HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-V 119
Query: 108 EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ-AASEGLPIVPV 166
            ++++ S+    GS D     E+   E     + Y  SKA +D +A     + GL +   
Sbjct: 120 GRVVHVSTNQVYGSIDSGSWTESSPLEPN---SPYAASKAGSDLVARAYHRTYGLDVRIT 176
Query: 167 YPGVIYGPGKLTTGNLVAKLMIERFN-GRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG 225
                YGP +     L+   +    + G LP Y G G +   + H DD   G    +  G
Sbjct: 177 RCCNNYGPYQHPE-KLIPLFVTNLLDGGTLPLY-GDGANVREWVHTDDHCRGIALVLAGG 234
Query: 226 RSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLI 285
           R+GE             I+ +   +  T+R    I   L+++ G       ++  +    
Sbjct: 235 RAGE-------------IYHIGGGLELTNRELTGI---LLDSLGADWSSVRKVADR---- 274
Query: 286 SYPTVHVLAHQWAYSCV--KAKTELGYNPR-SLKEGLQEVLPWLRSS 329
                    H   YS    K + ELGY P+ S  +GL   + W R +
Sbjct: 275 -------KGHDLRYSLDGGKIERELGYRPQVSFADGLARTVRWYREN 314

>pdb|4F6L|B Chain B, Crystal Structure Of Aureusimine Biosynthetic Cluster Reductase Domain Length = 508

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 86/192 (44%), Gaps = 25/192 (13%)
Query: 4   LVSGASGYLGGRLCHALLKQGHSVRALVRR----------TSDISGLPSEGALELVYGDV 53
           L++GA+G+LG  L  AL    H +   +R            ++++   SE  +E++  ++
Sbjct: 154 LLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNI 213
Query: 54  T----DYRSLVDACF--GCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV 107
                D+  + D         I H  A  + +  D   F  VNV+G  +V++ A++    
Sbjct: 214 EVIVGDFECMDDVVLPENMDTIIHAGARTDHF-GDDDEFEKVNVQGTVDVIRLAQQHHA- 271
Query: 108 EKIIYTS-----SFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLP 162
            ++IY S     ++F + + D   + E  V++ +   + Y RSK  ++   L+A + GL 
Sbjct: 272 -RLIYVSTISVGTYFDIDTEDVTFS-EADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLD 329
Query: 163 IVPVYPGVIYGP 174
              V  G +  P
Sbjct: 330 GRIVRVGNLTSP 341

>pdb|1R66|A Chain A, Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydratase) From Streptomyces Venezuelae With Nad And Tyd Bound Length = 337

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 83/347 (23%), Positives = 140/347 (40%), Gaps = 51/347 (14%)
Query: 1   MKILVSGASGYLGGRLCHALLKQGH------SVRALVRRT-----SDISGLPSEGALELV 49
           M++LV+G +G++G      LL   +       V  L   T     ++++ + ++  L  V
Sbjct: 1   MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFV 60
Query: 50  YGDVTDYRSLVDACFGCHVIFHTAA--LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV 107
           +GD+ D   L     G   I H AA   V+  +   S F   NV+G + ++Q A +   V
Sbjct: 61  HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-V 119
Query: 108 EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ-AASEGLPIVPV 166
            ++++ S+    GS D     E+   E     + Y  SKA +D +A     + GL +   
Sbjct: 120 GRVVHVSTDEVYGSIDSGSWTESSPLEPN---SPYAASKAGSDLVARAYHRTYGLDVRIT 176
Query: 167 YPGVIYGPGKLTTGNLVAKLMIERFN-GRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG 225
                YGP +     L+   +    + G LP Y G G +   + H DD   G    +  G
Sbjct: 177 RCCNNYGPYQHPE-KLIPLFVTNLLDGGTLPLY-GDGANVREWVHTDDHCRGIALVLAGG 234
Query: 226 RSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLI 285
           R+GE             I+ +   +  T+R    I   L+++ G       ++  +    
Sbjct: 235 RAGE-------------IYHIGGGLELTNRELTGI---LLDSLGADWSSVRKVADR---- 274
Query: 286 SYPTVHVLAHQWAYSCV--KAKTELGYNPR-SLKEGLQEVLPWLRSS 329
                    H   YS    K + ELGY P+ S  +GL   + W R +
Sbjct: 275 -------KGHDLRYSLDGGKIERELGYRPQVSFADGLARTVRWYREN 314

>pdb|1QYC|A Chain A, Crystal Structures Of Pinoresinol-Lariciresinol And Phenylcoumaran Benzylic Ether Reductases, And Their Relationship To Isoflavone Reductases Length = 308

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 109/262 (41%), Gaps = 51/262 (19%)
Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALE--------LVYGDV 53
           +IL+ GA+GY+G  +  A L  GH    LVR ++  S       LE        +V+G +
Sbjct: 6   RILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSI 65
Query: 54  TDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYT 113
            D+ SLV+A     V+  T               ++ +E   N+++A KE  TV++  + 
Sbjct: 66  DDHASLVEAVKNVDVVISTVG-------------SLQIESQVNIIKAIKEVGTVKR-FFP 111
Query: 114 SSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYG 173
           S F   G+      D + VH  +   + +E    V  K+     +EG+P   V      G
Sbjct: 112 SEF---GN------DVDNVHAVEPAKSVFE----VKAKVRRAIEAEGIPYTYVSSNCFAG 158
Query: 174 --PGKLTTGNLVA----KLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRS 227
                L    L A    K++I          +G GN R  F   +D+    I A++  R+
Sbjct: 159 YFLRSLAQAGLTAPPRDKVVI----------LGDGNARVVFVKEEDIGTFTIKAVDDPRT 208
Query: 228 GERYLLTGENASFMQIFDMAAV 249
             + L     A+ + + ++ A+
Sbjct: 209 LNKTLYLRLPANTLSLNELVAL 230

>pdb|1KEP|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb) From Streptococcus Suis With Dtdp-Xylose Bound Length = 348

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 80/351 (22%), Positives = 126/351 (35%), Gaps = 62/351 (17%)
Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE------GALELVYGDVTD 55
            I+V+G +G++G    H +      V   V      +G  +         +ELV GD+ D
Sbjct: 6   NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIAD 65
Query: 56  YRSLVDACFGCHVIFHTAALV--EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYT 113
              +         I H AA    +  L DPS F   N  G   +++AA++        Y 
Sbjct: 66  AELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARK--------YD 117
Query: 114 SSFFALGSTDGYIAD---------------ENQVHEEKYF-CTQYERSKAVADKIALQ-A 156
             F  + STD    D               E    E  Y   + Y  +KA +D I     
Sbjct: 118 IRFHHV-STDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWV 176
Query: 157 ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVD 216
            S G+          YGP +      + + +     G  P   G G +   + H +D   
Sbjct: 177 RSFGVKATISNCSNNYGPYQHIE-KFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHST 235
Query: 217 GHIAAMEKGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFS 276
           G  A + KGR GE YL+  +               G    +  + L ++E  G     + 
Sbjct: 236 GVWAILTKGRMGETYLIGAD---------------GEKNNKEVLEL-ILEKMGQPKDAYD 279
Query: 277 RITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPR--SLKEGLQEVLPW 325
            +T +         H L  ++A    K + ELG+ P+     EGL+E + W
Sbjct: 280 HVTDRAG-------HDL--RYAIDASKLRDELGWTPQFTDFSEGLEETIQW 321

>pdb|1KVT|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 103/258 (39%), Gaps = 43/258 (16%)
Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRR-TSDISGLPSEGAL-----ELVYGDVT 54
           M++LV+G SGY+G   C  LL+ GH V  L     S  S LP    L       V GD+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 55  DYRSLVDACFGCHVI---FHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEK 109
           +  +L+      H I    H A L  V   +  P  ++  NV G   ++ A +    V+ 
Sbjct: 61  N-EALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMR-AANVKN 118
Query: 110 IIYTSSFFALGSTDGYIADENQVHEEKYFCT-----QYERSKAVADKI--ALQAASEGLP 162
            I++S     G       D  ++   + F T      Y +SK + ++I   LQ A     
Sbjct: 119 FIFSSVATVYG-------DNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWS 171
Query: 163 I--------VPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFS------- 207
           I        V  +P    G       N +   + +   GR      +GND  +       
Sbjct: 172 IALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVR 231
Query: 208 -FCHVDDVVDGHIAAMEK 224
            + HV D+ DGH+ AMEK
Sbjct: 232 DYIHVMDLADGHVVAMEK 249

>pdb|1A9Z|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Galactose Length = 338

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 104/258 (40%), Gaps = 43/258 (16%)
Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRR-TSDISGLPSEGAL-----ELVYGDVT 54
           M++LV+G SGY+G   C  LL+ GH V  L     S  S LP    L       V GD+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 55  DYRSLVDACFGCHVI---FHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEK 109
           +  +L+      H I    H A L  V   +  P  ++  NV G   ++ A +    V+ 
Sbjct: 61  N-EALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMR-AANVKN 118
Query: 110 IIYTSSFFALGSTDGYIADENQVHEEKYFCT-----QYERSKAVADKI--ALQAASEGLP 162
            I++S+    G       D  ++   + F T      + +SK + ++I   LQ A     
Sbjct: 119 FIFSSAATVYG-------DNPKIPYVESFPTGTPQSPFGKSKLMVEQILTDLQKAQPDWS 171
Query: 163 I--------VPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFS------- 207
           I        V  +P    G       N +   + +   GR      +GND  +       
Sbjct: 172 IALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVR 231
Query: 208 -FCHVDDVVDGHIAAMEK 224
            + HV D+ DGH+ AMEK
Sbjct: 232 DYIHVMDLADGHVVAMEK 249

>pdb|2PZK|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmg In Complex With Nad Length = 330

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISGLPSEGALELVYGDVTDYRSL 59
           M+IL++G +G LG  L    L QGH +  +    T     LP    L ++ G VTD   L
Sbjct: 21  MRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLL 80
Query: 60  ---VDACFGCHVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKE 103
               D+    HV+   AA  +P  W  D     A NV+G  NV +AA +
Sbjct: 81  ERAFDSFKPTHVVHSAAAYKDPDDWAEDA----ATNVQGSINVAKAASK 125

>pdb|4EGB|A Chain A, 3.0 Angstrom Resolution Crystal Structure Of Dtdp-Glucose 4,6- Dehydratase (Rfbb) From Bacillus Anthracis Str. Ames In Complex With Nad Length = 346

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 76/346 (21%), Positives = 135/346 (39%), Gaps = 52/346 (15%)
Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVR--------RTSDISGLPSEGALELVYGDV 53
            ILV+G +G++G    H  L Q +    ++           +++  +        V G++
Sbjct: 26  NILVTGGAGFIGSNFVHYXL-QSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEI 84
Query: 54  TDYRSL--VDACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEK 109
            +   L  V       VI + AA   V+  + +P  F+  NV G   +++  K+   + K
Sbjct: 85  QNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHI-K 143
Query: 110 IIYTSS---FFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA-ASEGLPIVP 165
           ++  S+   + +LG T G   +E  +       + Y  SKA AD IAL    +  LP++ 
Sbjct: 144 LVQVSTDEVYGSLGKT-GRFTEETPLAPN----SPYSSSKASADXIALAYYKTYQLPVIV 198
Query: 166 VYPGVIYGPGKLTTGNLVAKLMIERFNGR-LPGYIGYGNDRFSFCHVDDVVDGHIAAMEK 224
                 YGP +     L+   +     G+ LP Y G G +   + HV D        + K
Sbjct: 199 TRCSNNYGPYQYPE-KLIPLXVTNALEGKKLPLY-GDGLNVRDWLHVTDHCSAIDVVLHK 256
Query: 225 GRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPL 284
           GR GE Y + G N                           +E    I+    +    +  
Sbjct: 257 GRVGEVYNIGGNNEKTN-----------------------VEVVEQIITLLGKTKKDIEY 293
Query: 285 ISYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSS 329
           ++    H    ++A +  K K E  + P+ + ++GLQE + W   +
Sbjct: 294 VTDRLGH--DRRYAINAEKXKNEFDWEPKYTFEQGLQETVQWYEKN 337

>pdb|3SXP|A Chain A, Crystal Structure Of Helicobacter Pylori Adp-L-Glycero-D-Manno- Heptose-6-Epimerase (Rfad, Hp0859) Length = 362

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/246 (21%), Positives = 103/246 (41%), Gaps = 29/246 (11%)
Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVR---RTSDISGLPSEGAL-----------EL 48
           IL++G +G++G  L     +     + +V    R++ +       +L           E+
Sbjct: 13  ILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEV 72
Query: 49  VYGDVT---DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK 105
           +  D+    D R L    F    +FH AA+ +  + +       N +   N+++ A+  K
Sbjct: 73  IAADINNPLDLRRLEKLHFDY--LFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKK 130
Query: 106 TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVP 165
              K+IY SS    G+T       N V + +     Y  SK   D+  L  +++ + +  
Sbjct: 131 A--KVIYASSAGVYGNTKA----PNVVGKNESPENVYGFSKLCMDEFVLSHSNDNVQVGL 184
Query: 166 VYPGVIYGPG---KLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAM 222
            Y  V YGP    K  T ++V +L +     +      +G     F +++DV+  ++ AM
Sbjct: 185 RYFNV-YGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAM 243
Query: 223 EKGRSG 228
           +  +SG
Sbjct: 244 KAQKSG 249

>pdb|4F6C|A Chain A, Crystal Structure Of Aureusimine Biosynthetic Cluster Reductase Domain Length = 427

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 83/192 (43%), Gaps = 25/192 (13%)
Query: 4   LVSGASGYLGGRLCHALLKQGHSVRALVRR----------TSDISGLPSEGALELVYGDV 53
           L++GA+G+LG  L  AL    H +   +R            ++++   SE  +E    ++
Sbjct: 73  LLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLXTNLNDYFSEETVEXXLSNI 132
Query: 54  T----DYRSLVDACF--GCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV 107
                D+    D         I H  A  + +  D   F  VNV+G  +V++ A++    
Sbjct: 133 EVIVGDFECXDDVVLPENXDTIIHAGARTDHF-GDDDEFEKVNVQGTVDVIRLAQQHHA- 190
Query: 108 EKIIYTS-----SFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLP 162
            ++IY S     ++F + + D   + E  V++ +   + Y RSK  ++   L+A + GL 
Sbjct: 191 -RLIYVSTISVGTYFDIDTEDVTFS-EADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLD 248
Query: 163 IVPVYPGVIYGP 174
              V  G +  P
Sbjct: 249 GRIVRVGNLTSP 260

>pdb|3SLG|A Chain A, Crystal Structure Of Pbgp3 Protein From Burkholderia Pseudomallei Length = 372

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/260 (20%), Positives = 109/260 (41%), Gaps = 26/260 (10%)
Query: 2   KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           K+L+ G +G++G  L   +L+     V  +  +T  +  L     +    GD+T  +  V
Sbjct: 26  KVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWV 85
Query: 61  D-ACFGCHVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY--TSS 115
           +     C VI    A+  P  ++  P R F ++ E    +V++A   K  + +++  TS 
Sbjct: 86  EYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSA--VKYGKHLVFPSTSE 143
Query: 116 FFALGSTDGYIADENQ-----VHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGV 170
            + + + + +  D +      +++ ++    Y  SK + D++      EGL      P  
Sbjct: 144 VYGMCADEQFDPDASALTYGPINKPRWI---YACSKQLMDRVIWGYGMEGLNFTLFRPFN 200
Query: 171 IYGPG-------KLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAME 223
             GPG       K  +  +V + +     G     +  G+ + +F +VDD +   +  +E
Sbjct: 201 WIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKIIE 260
Query: 224 KGR---SGERYLLTGENASF 240
                 +G+ Y +   N +F
Sbjct: 261 NSNGVATGKIYNIGNPNNNF 280

>pdb|3VPS|A Chain A, Structure Of A Novel Nad Dependent-Ndp-Hexosamine 5,6-Dehydratase, Tuna, Involved In Tunicamycin Biosynthesis Length = 321

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 89/236 (37%), Gaps = 39/236 (16%)
Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI---SGLPSEGALELVYGDVTDY-- 56
           +IL++G +G++GG L  AL+  G  V  L     D+     +P EG  + +   V +   
Sbjct: 9   RILITGGAGFIGGHLARALVASGEEVTVL----DDLRVPPMIPPEGTGKFLEKPVLELEE 64
Query: 57  RSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNV-----VQAAKETKTVEKII 111
           R L D     H+  H +           R F   ++ L NV     + A   +  V K++
Sbjct: 65  RDLSDVRLVYHLASHKSV---------PRSFKQPLDYLDNVDSGRHLLALCTSVGVPKVV 115
Query: 112 YTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGV- 170
             S+    G  D     E+             RS   A K+ L+  +       V P V 
Sbjct: 116 VGSTCEVYGQADTLPTPED--------SPLSPRSPYAASKVGLEMVAGAHQRASVAPEVG 167
Query: 171 ------IYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIA 220
                 +YGPG+     LV +L             G G  R  F ++ DVVD  +A
Sbjct: 168 IVRFFNVYGPGERPDA-LVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVA 222

>pdb|3A1N|A Chain A, Crystal Structure Of L-Threonine Dehydrogenase From Hyperthermophilic Archaeon Thermoplasma Volcanium Length = 317

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 10/122 (8%)
Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           ILV+G+SG +G  L    L + +  + ++   SDI    + G ++ +  DV++ R  +D 
Sbjct: 2   ILVTGSSGQIGTELV-PYLAEKYGKKNVI--ASDIVQRDT-GGIKFITLDVSN-RDEIDR 56
Query: 63  C---FGCHVIFHTAALVEPW-LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA 118
               +    IFH A ++      DP+  + VN+ G  N+++AAK+ + VEK++  S+   
Sbjct: 57  AVEKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHR-VEKVVIPSTIGV 115
Query: 119 LG 120
            G
Sbjct: 116 FG 117

>pdb|3A9W|A Chain A, Crystal Structure Of L-Threonine Bound L-Threonine Dehydrogenase (Y137f) From Hyperthermophilic Archaeon Thermoplasma Volcanium Length = 317

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 10/122 (8%)
Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           ILV+G+SG +G  L    L + +  + ++   SDI    + G ++ +  DV++ R  +D 
Sbjct: 2   ILVTGSSGQIGTELV-PYLAEKYGKKNVI--ASDIVQRDT-GGIKFITLDVSN-RDEIDR 56
Query: 63  C---FGCHVIFHTAALVEPW-LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA 118
               +    IFH A ++      DP+  + VN+ G  N+++AAK+ + VEK++  S+   
Sbjct: 57  AVEKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHR-VEKVVIPSTIGV 115
Query: 119 LG 120
            G
Sbjct: 116 FG 117

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	334
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	1e-129
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	4e-49
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	1e-47
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	2e-47
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	2e-46
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	7e-40
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	7e-38
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	2e-36
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	9e-36
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	1e-31
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	1e-31
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	2e-31
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	4e-31
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	5e-31
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	1e-30
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	7e-30
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	3e-29
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	9e-29
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	3e-28
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	4e-28
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	1e-27
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	1e-27
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	1e-27
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	3e-27
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	4e-27
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	5e-27
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	2e-26
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	2e-25
1xq6_A	253	Unknown protein; structural genomics, protein stru	2e-25
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	2e-25
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	3e-25
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	4e-24
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	1e-23
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	1e-23
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	8e-23
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	8e-23
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	3e-22
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	4e-22
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	5e-22
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	7e-22
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	7e-22
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	1e-21
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	3e-21
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	4e-21
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	1e-20
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	4e-19
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	4e-19
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	1e-18
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	3e-18
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	6e-18
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	2e-17
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	3e-17
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	3e-17
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	6e-17
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	9e-15
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	5e-13
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	2e-12
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	6e-11
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	4e-10
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	6e-10
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	2e-09
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	3e-09
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	3e-09
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	3e-09
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	1e-08
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	4e-08
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	4e-08
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	5e-08
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	6e-08
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	7e-08
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	3e-07
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	1e-06
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	3e-06
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	7e-06
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	1e-05
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	4e-05
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	1e-04
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	1e-04
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	2e-04
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	4e-04
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	4e-04
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	6e-04
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	7e-04

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score =  370 bits (953), Expect = e-129
 Identities = 82/338 (24%), Positives = 137/338 (40%), Gaps = 15/338 (4%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           +K  V GA+G LG     A+   GH +  + R +S I  L      E    ++ D+  L 
Sbjct: 14  VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLE-PECRVAEMLDHAGLE 72

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
            A  G   +  +A              A  +        A  + + V +I+Y  S +A+ 
Sbjct: 73  RALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQAR-VPRILYVGSAYAMP 131

Query: 121 -STDGYIADENQVHEE-KYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPG--K 176
               G    E   ++      + Y   K   D+ A + A  GLP+V   PG++ G     
Sbjct: 132 RHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARNGLPVVIGIPGMVLGELDIG 191

Query: 177 LTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTGE 236
            TTG ++  +     NG +  Y+       +     +   G + A+E+GR GERYLLTG 
Sbjct: 192 PTTGRVITAIG----NGEMTHYVAGQ---RNVIDAAEAGRGLLMALERGRIGERYLLTGH 244

Query: 237 NASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQ 296
           N     +    A + G   P+  + + +  A   +     R++G+LPL+    + V+A  
Sbjct: 245 NLEMADLTRRIAELLGQPAPQP-MSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGG 303

Query: 297 WAYSCVKAKTELGYNP-RSLKEGLQEVLPWLRSSGMIK 333
                 KA+ ELG+    +L + L   + W R +G   
Sbjct: 304 QFLDGRKAREELGFFSTTALDDTLLRAIDWFRDNGYFN 341

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score =  165 bits (421), Expect = 4e-49
 Identities = 69/265 (26%), Positives = 116/265 (43%), Gaps = 21/265 (7%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD----ISGLPS-EGA---LELVYGDV 53
           ++ V+G +G+LG  +  +LL+ G+SV   +R   +    +S L +  GA   L     D+
Sbjct: 3   RVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADL 62

Query: 54  TDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAV-NVEGLKNVVQAAKETKTVEKIIY 112
           ++  S   A  GC  IFHTA+ ++  + +P        V+G   +++A   +KTV++ IY
Sbjct: 63  SNPDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIY 122

Query: 113 TSSFFAL--GSTDGYIADE------NQVHEEKYFCTQYERSKAVADKIALQ-AASEGLPI 163
           TSS  A+     D  + DE      + +   K F   Y  SK +A+K  L+     G+ +
Sbjct: 123 TSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGIDV 182

Query: 164 VPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAME 223
           V +    I G           +  +    G+       G  RF   HVDDV   HI  +E
Sbjct: 183 VTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQI---GVTRFHMVHVDDVARAHIYLLE 239

Query: 224 KGRSGERYLLTGENASFMQIFDMAA 248
               G RY  +       ++  + +
Sbjct: 240 NSVPGGRYNCSPFIVPIEEMSQLLS 264

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score =  162 bits (412), Expect = 1e-47
 Identities = 69/300 (23%), Positives = 115/300 (38%), Gaps = 31/300 (10%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS------GLPSEGALELVYGDVTD 55
              V G +G++   L   LL++G++V   VR   +         L   G L++   D+TD
Sbjct: 11  TACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTD 70

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDPSRFF---AVNVEGLKNVVQAAKETKTVEKIIY 112
             S      GC  +FH A  V     DP       A+   G+ NV++A    K+V+++I 
Sbjct: 71  ELSFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQ--GVVNVMKACTRAKSVKRVIL 128

Query: 113 TSSFFALGST----DGYIADE------NQVHEEKYFCTQYERSKAVADKIALQ-AASEGL 161
           TSS  A+        G + DE        +   K     Y  SK +A+K A + A    +
Sbjct: 129 TSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEENNI 188

Query: 162 PIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGY-----IGYGNDRFSFCHVDDVVD 216
            ++ V P ++ G    +       L +    G          +   +   S  HV+DV  
Sbjct: 189 DLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVEDVCR 248

Query: 217 GHIAAMEKGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFS 276
            HI   EK  +  RY+    N S  ++    +       P++ +P    +      +  S
Sbjct: 249 AHIFVAEKESASGRYICCAANTSVPELAKFLS----KRYPQYKVPTDFGDFPPKSKLIIS 304

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score =  159 bits (403), Expect = 2e-47
 Identities = 43/236 (18%), Positives = 78/236 (33%), Gaps = 26/236 (11%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
            KI++ GASG++G  L +  L +G  V A+VR    I        L++   DV+    + 
Sbjct: 5   KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEH--LKVKKADVSSLDEVC 62

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
           + C G   +            +    +   ++    ++   K+   V + +      +L 
Sbjct: 63  EVCKGADAVISAFNPG----WNNPDIYDETIKVYLTIIDGVKKAG-VNRFLMVGGAGSLF 117

Query: 121 STDG-YIADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPIVPVYPGVIYGPGKLT 178
              G  + D  +V E           KA+ +        E  +  V   P     PG  T
Sbjct: 118 IAPGLRLMDSGEVPENILP-----GVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRT 172

Query: 179 TGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR-SGERYLL 233
               + K             +       S   V+D     I  +E  +   ER+ +
Sbjct: 173 GRYRLGK-----------DDMIVDIVGNSHISVEDYAAAMIDELEHPKHHQERFTI 217

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score =  159 bits (404), Expect = 2e-46
 Identities = 76/353 (21%), Positives = 144/353 (40%), Gaps = 52/353 (14%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS------GLP-SEGALELVYGDVT 54
            + V+GASG++G  L   LL++G++VRA VR  +++        LP +E  L L   D+ 
Sbjct: 7   TVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLA 66

Query: 55  DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFF---AVNVEGLKNVVQAAKETKTVEKII 111
           D  S  +A  GC  +FH A  ++    DP        +   G+  ++++    KTV +++
Sbjct: 67  DEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIE--GMLGIMKSCAAAKTVRRLV 124

Query: 112 YTSSFFAL--GSTDGYIADE------NQVHEEKYFCTQYERSKAVADKIALQAASE-GLP 162
           +TSS   +        + DE           +K     Y  SK +A++ A + A E  + 
Sbjct: 125 FTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNID 184

Query: 163 IVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAM 222
            + + P ++ GP  +++        +    G    Y      +  F H+DD+ + HI   
Sbjct: 185 FITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSI--IRQGQFVHLDDLCNAHIYLF 242

Query: 223 EKGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKL 282
           E  ++  RY+ +  +   + +  M         P + IP             F  +   L
Sbjct: 243 ENPKAEGRYICSSHDCIILDLAKMLR----EKYPEYNIP-----------TEFKGVDENL 287

Query: 283 PLISYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSSGMIKY 334
             + + +             K  T+LG+  + SL++     +   R+ G++  
Sbjct: 288 KSVCFSS-------------KKLTDLGFEFKYSLEDMFTGAVDTCRAKGLLPP 327

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score =  142 bits (360), Expect = 7e-40
 Identities = 49/275 (17%), Positives = 91/275 (33%), Gaps = 32/275 (11%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS------GLPSEGALELVY-GDVT 54
            +LV+GA+G++   +   LL+ G+ VR   R  S ++           G  E     D+ 
Sbjct: 13  LVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDML 72

Query: 55  DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
              +  +   G   + H A++V  +           + G  N ++AA  T +V++ + TS
Sbjct: 73  KQGAYDEVIKGAAGVAHIASVV-SFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTS 131

Query: 115 SFFAL----GSTDGYIADE-------------NQVHEEKYFCTQYERSKAVADKIALQAA 157
           S  +      + +G   DE                 + +     Y  SK  A+  A +  
Sbjct: 132 STVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFM 191

Query: 158 SE---GLPIVPVYPGVIYGP--GKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVD 212
            E      +  V P    G      T     +  M+  FNG +   +        +    
Sbjct: 192 DENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALAL-MPPQYYVSAV 250

Query: 213 DVVDGHIAAMEK-GRSGERYLLTGENASFMQIFDM 246
           D+   H+  +        R   T     +  +   
Sbjct: 251 DIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLAT 285

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score =  136 bits (344), Expect = 7e-38
 Identities = 51/332 (15%), Positives = 105/332 (31%), Gaps = 43/332 (12%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           +KI V+G +G+LG  +  ++   G++   L        G  +    E    D T    L+
Sbjct: 3   LKIAVTGGTGFLGQYVVESIKNDGNTPIILT----RSIGNKAINDYEYRVSDYTL-EDLI 57

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
           +       + H AA            F  N    +N+  A  E   +  I+Y S+  A  
Sbjct: 58  NQLNDVDAVVHLAATRG--SQGKISEFHDNEILTQNLYDACYENN-ISNIVYASTISAYS 114

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPIVPVYPGVIYGPGKLTT 179
                  +E ++         Y  SK   + I    + + GL I  +    +YG      
Sbjct: 115 DETSLPWNEKELPLPDLM---YGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGF-NEKN 170

Query: 180 GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERY-LLTGENA 238
             ++ +   + F+G           +  F +  D     I A+++ +    + + +G+  
Sbjct: 171 NYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVSGTFNIGSGDAL 230

Query: 239 SFMQIFDMAAVITGTS-RPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQW 297
           +  ++ +      G         P                    +              +
Sbjct: 231 TNYEVANTINNAFGNKDNLLVKNP---------------NANEGIH-----------SSY 264

Query: 298 AYSCVKAKTELGYNPR-SLKEGLQEVLPWLRS 328
                KAK  L ++   +    ++E+   +R 
Sbjct: 265 M-DSSKAKELLDFSTDYNFATAVEEIHLLMRG 295

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score =  132 bits (335), Expect = 2e-36
 Identities = 58/344 (16%), Positives = 117/344 (34%), Gaps = 58/344 (16%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           ILV+G+SG +G  L   L ++      +    SDI    + G ++ +  DV++   +  A
Sbjct: 2   ILVTGSSGQIGTELVPYLAEKYGKKNVIA---SDIVQRDTGG-IKFITLDVSNRDEIDRA 57

Query: 63  C--FGCHVIFHTAALV----EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
              +    IFH A ++    E    DP+  + VN+ G  N+++AAK+ + VEK++  S+ 
Sbjct: 58  VEKYSIDAIFHLAGILSAKGE---KDPALAYKVNMNGTYNILEAAKQHR-VEKVVIPSTI 113

Query: 117 FALGSTDGYI-ADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPIVPV-YPGVIYG 173
              G            +   +   T +  +K  A+ +      + GL +  + YPG+   
Sbjct: 114 GVFGPETPKNKVPSITITRPR---TMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGI-IS 169

Query: 174 PGKLTTG---NLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGER 230
                T    +   ++                N      ++ D +   +   E  R    
Sbjct: 170 YKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKLV 229

Query: 231 ----YLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLIS 286
               Y +T    +  +++             +                      K     
Sbjct: 230 LRNGYNVTAYTFTPSELYSKIKERIPEFEIEYKED----------------FRDK----- 268

Query: 287 YPTVHVLAHQWAYS--CVKAKTELGYNPR-SLKEGLQEVLPWLR 327
                 +A  W  S    +A  E G++    L   + +++  + 
Sbjct: 269 ------IAATWPESLDSSEASNEWGFSIEYDLDRTIDDMIDHIS 306

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score =  132 bits (334), Expect = 9e-36
 Identities = 69/359 (19%), Positives = 126/359 (35%), Gaps = 66/359 (18%)

Query: 1   MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSD--ISG----LPSEGALELVYGDV 53
             ++V G +G++G  L   LL+ G + V  +     D  +S     +P   A+      +
Sbjct: 33  TNVMVVGGAGFVGSNLVKRLLELGVNQVHVV-----DNLLSAEKINVPDHPAVRFSETSI 87

Query: 54  TDYRSLVDACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKII 111
           TD   L         +FH A     +  + DP      N      + +  K  K ++K++
Sbjct: 88  TDDALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVV 147

Query: 112 YTSSFFALGSTDGYIADENQVHEEKYFC---TQYERSKAVADKIALQ-AASEGLPIVPVY 167
           Y+++  ++       A   +  +        + Y  SK   +  ++       LP V   
Sbjct: 148 YSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQHQLPTVRAR 207

Query: 168 PGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIG----------YG---NDRFSFCHVDDV 214
              +YGPG++             +    P +I                  R  F  V+DV
Sbjct: 208 FQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATR-DFIFVEDV 266

Query: 215 VDGHIAAMEKGRSGERY-LLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILV 273
            +G IA    G  G  Y + +G+  S   I D+A  I                       
Sbjct: 267 ANGLIACAADGTPGGVYNIASGKETS---IADLATKI----------------------- 300

Query: 274 FFSRITGKLPLISYPT---VHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRS 328
             + ITG    +             ++  S  KA+ ELG++   S+ +GL++ + W ++
Sbjct: 301 --NEITGNNTELDRLPKRPWDNSGKRFG-SPEKARRELGFSADVSIDDGLRKTIEWTKA 356

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score =  120 bits (303), Expect = 1e-31
 Identities = 60/362 (16%), Positives = 110/362 (30%), Gaps = 36/362 (9%)

Query: 4   LVSGASGYLGGRLCHALLKQGHS-----VRALVRRTSDISGLPSEGALELVYGDVTDYRS 58
           L+ G +G +G  L   L           V  + RRT        +  +  V  D++D   
Sbjct: 5   LIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRP--AWHEDNPINYVQCDISDPDD 62

Query: 59  LVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKET-KTVEKIIYTSSFF 117
                     + H   +              N +  +NV+ A       ++ I   +   
Sbjct: 63  SQAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRK 122

Query: 118 A---LGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ--AASEGLPIVPVYPGVIY 172
                  + G I   +  + E     +Y       + I L+     EGL      PG I+
Sbjct: 123 HYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSVHRPGNIF 182

Query: 173 GPGKLTTGNLV----AKLMIERFNG---RLPGYIGYGNDRFSFCHVDDVVDGHI-AAMEK 224
           G    +  NLV        I +  G   R  G     +        D + + HI AA++ 
Sbjct: 183 GFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDP 242

Query: 225 GRSGERYLLT-GENASFMQIFDMAAVITGT--SRPRFCIPLWLIEAYGWILVFFSRITGK 281
               E + ++ G+   +   + + A   G         + L L +        +  I  +
Sbjct: 243 YAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKGKEPVWEEIVRE 302

Query: 282 LPLISYPTVHVLAHQWAY----------SCVKAKTELGYNP-RSLKEGLQEVLPWLRSSG 330
             L       V    +            S  K+K E G+   R+ K      +   ++  
Sbjct: 303 NGLTPTKLKDVGIWWFGDVILGNECFLDSMNKSK-EHGFLGFRNSKNAFISWIDKAKAYK 361

Query: 331 MI 332
           ++
Sbjct: 362 IV 363

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score =  117 bits (295), Expect = 1e-31
 Identities = 42/246 (17%), Positives = 86/246 (34%), Gaps = 36/246 (14%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           M++LV GA+G +   L   L  +GH   A+VR       L   GA ++V  ++ +     
Sbjct: 22  MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEE--DFS 79

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
            A      +   A           +   +++ G    +Q A++   +++ I  SS   + 
Sbjct: 80  HAFASIDAVVFAAGSGPH--TGADKTILIDLWGAIKTIQEAEKRG-IKRFIMVSSVGTVD 136

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTG 180
              G +   +           Y  +K +AD   L+ +   L     Y   I  PG L+  
Sbjct: 137 PDQGPMNMRH-----------YLVAKRLADD-ELKRS--SLD----Y--TIVRPGPLSNE 176

Query: 181 NLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRS-GERYLLTGENAS 239
               K+ +      +   I             DV       +++  + G+ + +   +  
Sbjct: 177 ESTGKVTVSPHFSEITRSI----------TRHDVAKVIAELVDQQHTIGKTFEVLNGDTP 226

Query: 240 FMQIFD 245
             ++ +
Sbjct: 227 IAKVVE 232

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score =  119 bits (300), Expect = 2e-31
 Identities = 59/339 (17%), Positives = 119/339 (35%), Gaps = 52/339 (15%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD--ISGLPS--EGALELVYGDVTDY 56
             I+V+G +G++G  +   L +  + +  +     D   SG       A  LV  D+   
Sbjct: 2   SLIVVTGGAGFIGSHVVDKLSE-SNEIVVI-----DNLSSGNEEFVNEAARLVKADLAA- 54

Query: 57  RSLVDACFGCHVIFHTAA--LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
             + D   G   ++H AA   V     +P   +  NV     +++A ++   V +I++TS
Sbjct: 55  DDIKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAG-VSRIVFTS 113

Query: 115 SFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE--GLPIVPV-YPGVI 171
           +    G        E+           Y  SK   + + +++      +      +  V 
Sbjct: 114 TSTVYGEAKVIPTPEDYPTHPISL---YGASKLACEAL-IESYCHTFDMQAWIYRFANV- 168

Query: 172 YGPGKLTTGNLVAKLMIERFNGRLPGYI-GYGNDRFSFCHVDDVVDGHIAAMEKGRSGER 230
            G    +T  ++   +++         I G G    S+ ++ D VD  +  +        
Sbjct: 169 IGRR--STHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDERVNI 226

Query: 231 Y-LLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPT 289
           + + + +     +I ++     G S        +     GW         G +P      
Sbjct: 227 FNIGSEDQIKVKRIAEIVCEELGLSPR----FRFTGGDRGW--------KGDVP------ 268

Query: 290 VHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLR 327
             +L      S  K K  LG+ PR + +E ++  +  L 
Sbjct: 269 -VMLL-----SIEKLK-RLGWKPRYNSEEAVRMAVRDLV 300

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score =  118 bits (298), Expect = 4e-31
 Identities = 65/341 (19%), Positives = 119/341 (34%), Gaps = 48/341 (14%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD--ISGLPS--EGALELVYGDVTDY 56
           M+I+V+G +G++G  L   L++ G+ V  +     D   SG       + EL   D+ DY
Sbjct: 1   MRIVVTGGAGFIGSHLVDKLVELGYEVVVV-----DNLSSGRREFVNPSAELHVRDLKDY 55

Query: 57  RSLVDACFGCHVIFHTAA--LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
                A     V+FH AA   V     +P   F  NV    NV++ A++T  V  +++ S
Sbjct: 56  SWG--AGIKGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTG-VRTVVFAS 112

Query: 115 SFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPIVPVYPGVIYG 173
           S    G  D     E + ++       Y  +KA  + +    A   G+  + V    + G
Sbjct: 113 SSTVYGDADVIPTPEEEPYKPISV---YGAAKAAGEVMCATYARLFGVRCLAVRYANVVG 169

Query: 174 PGKLTTGNLVAKLMIERFNGRLPGYI-GYGNDRFSFCHVDDVVDGHIAAMEK----GRSG 228
           P       ++   +++         + G G  R S+ +V D V+  +AA +K        
Sbjct: 170 PRL--RHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPF 227

Query: 229 ERY-LLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISY 287
               +   +    + I  + A + G                   +               
Sbjct: 228 LALNVGNVDAVRVLDIAQIVAEVLGLRPE---------------IRLVPSTPDGRGWPGD 272

Query: 288 PTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLR 327
                  +    +  K     G+ P  +  E +++    L 
Sbjct: 273 V-----KYMTL-AVTKLMKLTGWRPTMTSAEAVKKTAEDLA 307

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score =  118 bits (299), Expect = 5e-31
 Identities = 68/347 (19%), Positives = 119/347 (34%), Gaps = 46/347 (13%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRAL----------VRRTSDISGLPSEGALELVYG 51
             L++G +G++G  L   LLK    V  L          +     +         + + G
Sbjct: 29  VWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQG 88

Query: 52  DVTDYRSLVDACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEK 109
           D+ +     +AC G   + H AAL  V   + DP    A N++G  N++ AA++ K V+ 
Sbjct: 89  DIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQS 147

Query: 110 IIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPIVPVYP 168
             Y +S    G   G    E+ + +       Y  +K V +  A   +   G   + +  
Sbjct: 148 FTYAASSSTYGDHPGLPKVEDTIGKPLSP---YAVTKYVNELYADVFSRCYGFSTIGLRY 204

Query: 169 GVIYGPG---KLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG 225
             ++G           ++ K       G      G G     FC++++ V  ++ A   G
Sbjct: 205 FNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAG 264

Query: 226 RS--GERY-LLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKL 282
                + Y +  G   S  Q+F         +   +       +          R  G +
Sbjct: 265 LDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDF---------R-EGDV 314

Query: 283 PLISYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRS 328
                       H  A    KA   LGY P+  +  G+   +PW   
Sbjct: 315 R-----------HSLA-DISKAAKLLGYAPKYDVSAGVALAMPWYIM 349

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score =  114 bits (288), Expect = 1e-30
 Identities = 45/247 (18%), Positives = 86/247 (34%), Gaps = 40/247 (16%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVT-DYRSL 59
           MKI + G++G +G  L  +L    + + A  R+   +        ++ V+ DV      +
Sbjct: 1   MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYN---NVKAVHFDVDWTPEEM 57

Query: 60  VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
                G   I + +               V++ G   ++QAA++ + V++ I  S+ F+L
Sbjct: 58  AKQLHGMDAIINVSG------SGGKSLLKVDLYGAVKLMQAAEKAE-VKRFILLSTIFSL 110

Query: 120 GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTT 179
                  A  + + +       Y  +K  AD   L   +  L     Y   I  PG LT 
Sbjct: 111 QPEKWIGAGFDALKD-------YYIAKHFADL-YLTKET-NLD----Y--TIIQPGALT- 154

Query: 180 GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRS-GERYLLTGENA 238
                            G I   ++  +   + DV D     +    S G+   +     
Sbjct: 155 ------------EEEATGLIDINDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNGKT 202

Query: 239 SFMQIFD 245
           +  +  +
Sbjct: 203 AIKEALE 209

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score =  114 bits (287), Expect = 7e-30
 Identities = 58/335 (17%), Positives = 97/335 (28%), Gaps = 66/335 (19%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
            KIL++G  G LG  L   L  QGH V  L R    +      G  + +  DVT   +L 
Sbjct: 4   SKILIAGC-GDLGLELARRLTAQGHEVTGLRRSAQPM----PAGV-QTLIADVTRPDTLA 57

Query: 61  DAC-FGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
                   ++ +  A           +    VEGL+N + A +    ++ + + SS    
Sbjct: 58  SIVHLRPEILVYCVA---ASEYSDEHYRLSYVEGLRNTLSALEGAP-LQHVFFVSSTGVY 113

Query: 120 GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTT 179
           G       DE+          +    K + +    +A         +    IYGPG    
Sbjct: 114 GQEVEEWLDEDTPPI-----AKDFSGKRMLE---AEALLAAYSSTILRFSGIYGPG---- 161

Query: 180 GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEK---GRSGERYLLT-G 235
                +L + R     P      N   +  H DD        +++         Y++T  
Sbjct: 162 -----RLRMIRQAQT-PEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDN 215

Query: 236 ENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAH 295
           +      +    A   G + P    P               ++                 
Sbjct: 216 QPLPVHDLLRWLADRQGIAYPAGATPPVQGNK---------KL----------------- 249

Query: 296 QWAYSCVKAKTELGYNPR--SLKEGLQEVLPWLRS 328
               S  +     GY         G   +L  +R 
Sbjct: 250 ----SNARLL-ASGYQLIYPDYVSGYGALLAAMRE 279

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score =  110 bits (277), Expect = 3e-29
 Identities = 40/240 (16%), Positives = 89/240 (37%), Gaps = 29/240 (12%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKI + GA+G  G R+      +GH V A+VR    I+       + ++  D+ D    +
Sbjct: 1   MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--KDINILQKDIFD--LTL 56

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
                 +V+     +              +V  L +++     T    +++      +L 
Sbjct: 57  SDLSDQNVVVDAYGI-------SPDEAEKHVTSLDHLISVLNGTV-SPRLLVVGGAASLQ 108

Query: 121 STD--GYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLT 178
             +    + +   + E  Y+ T   ++K +     L++         + P  ++ PG+ T
Sbjct: 109 IDEDGNTLLESKGLREAPYYPTARAQAKQLE---HLKSHQAEFSWTYISPSAMFEPGERT 165

Query: 179 TGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR-SGERYLLTGEN 237
               + K            ++ +G+D  SF  ++D     +  +E+     E + + G+ 
Sbjct: 166 GDYQIGK-----------DHLLFGSDGNSFISMEDYAIAVLDEIERPNHLNEHFTVAGKL 214

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score =  109 bits (274), Expect = 9e-29
 Identities = 32/137 (23%), Positives = 50/137 (36%), Gaps = 7/137 (5%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
            KI + GA+G  G       ++ G+ V  LVR +S +       A  +V GDV     + 
Sbjct: 4   KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPA-HVVVGDVLQAADVD 62

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
               G   +           P       V  EG +N+V A K    V+K++  +S F L 
Sbjct: 63  KTVAGQDAVIVLLGTRNDLSPT-----TVMSEGARNIVAAMKAHG-VDKVVACTSAFLLW 116

Query: 121 STDGYIADENQVHEEKY 137
                      V ++  
Sbjct: 117 DPTKVPPRLQAVTDDHI 133

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score =  111 bits (279), Expect = 3e-28
 Identities = 60/348 (17%), Positives = 103/348 (29%), Gaps = 68/348 (19%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD------ISGLPSEGALELVYGDVT 54
            K+ ++G  G +G  +   LL++G  V  +     D         L     L  V G + 
Sbjct: 22  KKVFITGICGQIGSHIAELLLERGDKVVGI-----DNFATGRREHLKDHPNLTFVEGSIA 76

Query: 55  DYRSLVDACFGCH--VIFHTAALVE-PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKII 111
           D+  +           + HTAA  + P   D       N  G  NVVQAAK+   V + +
Sbjct: 77  DHALVNQLIGDLQPDAVVHTAASYKDPD--DWYNDTLTNCVGGSNVVQAAKKNN-VGRFV 133

Query: 112 YTSSFFALGSTDGYIADENQVHEE---KYFCTQYERSKAVADKIALQAASEGLPIVPVYP 168
           Y  +        G    +  V  +       + Y  SK+  +         GL  V    
Sbjct: 134 YFQT----ALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDY---LEYSGLDFVTFRL 186

Query: 169 GVIYGPGKLTTGNLVAKLMIERFNGRL----PGYIGYGNDRFSFCHVDDVVDGHIAAMEK 224
             + GP +  +G       +  F  RL      ++     R  F  V D+    + A++ 
Sbjct: 187 ANVVGP-RNVSG------PLPIFFQRLSEGKKCFVT-KARR-DFVFVKDLARATVRAVDG 237

Query: 225 GRSGERY-LLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLP 283
                 Y   +G + +  +++D                                     P
Sbjct: 238 V-GHGAYHFSSGTDVAIKELYDAVVEAMALPSYP-------------EPEIRELGPDDAP 283

Query: 284 LISYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSSG 330
                              +   + G      LKE +   + + R  G
Sbjct: 284 -----------SILL-DPSRTIQDFGKIEFTPLKETVAAAVAYFREYG 319

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372

 Score =  111 bits (279), Expect = 4e-28
 Identities = 62/357 (17%), Positives = 121/357 (33%), Gaps = 51/357 (14%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALV-RRTSDISGLPSEGALELVYGDVTDYRSL 59
            K+L+ G +G++G  L   +L+        +  +T  +  L     +    GD+T  +  
Sbjct: 25  KKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEW 84

Query: 60  VDACFG-CHVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
           V+     C VI    A+  P  ++  P R F ++ E    +V++A +      +++    
Sbjct: 85  VEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGK--HLVFP--- 139

Query: 117 FALGSTD---GYIADENQVHEEKYFCTQ---------YERSKAVADKIALQAASEGLPIV 164
               ST    G  ADE Q   +    T          Y  SK + D++      EGL   
Sbjct: 140 ----STSEVYGMCADE-QFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGMEGLNFT 194

Query: 165 PVYPGVIYGPG-------KLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDG 217
              P    GPG       K  +  +V + +     G     +  G+ + +F +VDD +  
Sbjct: 195 LFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISA 254

Query: 218 HIAAME--KGRSGERYLLTGENASFMQIFDMAAVI---TGTSRPRFCIPLWLIEAYGWIL 272
            +  +E   G +  +    G   +   + ++A  +                         
Sbjct: 255 LMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAK---------- 304

Query: 273 VFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRS 328
               ++        Y   +               ELG+ P+ +  + L+++    R 
Sbjct: 305 --RVKLVETTSGAYYGNGYQDVQNRVPKIENTMQELGWAPQFTFDDALRQIFEAYRG 359

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score =  108 bits (273), Expect = 1e-27
 Identities = 59/341 (17%), Positives = 111/341 (32%), Gaps = 45/341 (13%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
            +IL++G +G++GG L  AL+  G  V  L         +P EG  + +   V +     
Sbjct: 8   HRILITGGAGFIGGHLARALVASGEEVTVLDDLRVP-PMIPPEGTGKFLEKPVLEL--EE 64

Query: 61  DACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA 118
                  +++H A+   V      P   +  NV+  ++++        V K++  S+   
Sbjct: 65  RDLSDVRLVYHLASHKSVPRSFKQP-LDYLDNVDSGRHLLALCTSVG-VPKVVVGSTCEV 122

Query: 119 LGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ-AASEGLPIVPVY-PGVIYGPGK 176
            G  D     E+     +     Y  SK   + +A     +   P V +     +YGP  
Sbjct: 123 YGQADTLPTPEDSPLSPRSP---YAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGP-G 178

Query: 177 LTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERY-LLTG 235
                LV +L             G G  R  F ++ DVVD  +A   +          +G
Sbjct: 179 ERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPL-PSVVNFGSG 237

Query: 236 ENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAH 295
           ++ S   +  +    +  +      P                              +   
Sbjct: 238 QSLSVNDVIRILQATSPAAEVARKQP--------------------------RPNEIT-E 270

Query: 296 QWAYSCVKAKTELGYNPR--SLKEGLQEVLPWLRSSGMIKY 334
             A        ++G       ++EG++  L W +S  +   
Sbjct: 271 FRA-DTALQTRQIGERSGGIGIEEGIRLTLEWWQSRDLDDI 310

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score =  109 bits (275), Expect = 1e-27
 Identities = 69/355 (19%), Positives = 118/355 (33%), Gaps = 69/355 (19%)

Query: 1   MKILVSGASGYLGGRLCHALLKQG-HSVRAL-----VRRTSDISGLPSEGALELVYGDVT 54
             I+V+G +G++G  +  AL  +G   +  +       +  ++  L    A  +   D  
Sbjct: 47  RMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDL--NIADYMDKEDFL 104

Query: 55  DYRSLVDACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY 112
                 +       IFH  A      W          N +  K ++    E +     +Y
Sbjct: 105 IQIMAGEEFGDVEAIFHEGACSSTTEWDGKY--MMDNNYQYSKELLHYCLEREI--PFLY 160

Query: 113 TSSFFALGSTDGYIADENQVHEEKYFC--TQYERSKAVADKIALQAASE-GLPIVPVYPG 169
            SS     +T G     + +   +Y      +  SK + D+   Q   E    IV    G
Sbjct: 161 ASS----AATYG-GRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPEANSQIV----G 211

Query: 170 V----IYGPG---KLTTGNLVAKLMIERFNGRLPGYIGYGNDRFS--FCHVDDVVDGHIA 220
                +YGP    K +  ++   L  +  NG  P     G++ F   F +V DV D ++ 
Sbjct: 212 FRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLF-EGSENFKRDFVYVGDVADVNLW 270

Query: 221 AMEKGRSGERY-LLTGENASFMQIFDMAAVITGTSRPRFC-IPLWLIEAYGWILVFFSR- 277
            +E G SG  + L TG   SF  + D         +  +   P  L   Y      F++ 
Sbjct: 271 FLENGVSG-IFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRY----QAFTQA 325

Query: 278 -ITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSSG 330
            +T                         +      P  ++ EG+ E + WL    
Sbjct: 326 DLT-----------------------NLRAAGYDKPFKTVAEGVTEYMAWLNRDA 357

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score =  109 bits (274), Expect = 1e-27
 Identities = 50/285 (17%), Positives = 96/285 (33%), Gaps = 35/285 (12%)

Query: 1   MKILVSGASGYLGGRLCHALLKQG-------HSVRAL-VRRTSDISGLPSEGALELVYGD 52
           M I + GA+G +G +L   L+K G            + V +    +G    GA++    D
Sbjct: 15  MHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFS--GAVDARAAD 72

Query: 53  VTDYRSLVDACF--GCHVIFHTAALV----EPWLPDPSRFFAVNVEGLKNVVQAAKE--- 103
           ++      +        VIFH AA+V    E    D  + + +N++G + +  A +    
Sbjct: 73  LSA-PGEAEKLVEARPDVIFHLAAIVSGEAE---LDFDKGYRINLDGTRYLFDAIRIANG 128

Query: 104 -TKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE-GL 161
                 ++++TSS    G+   Y   +          T Y   KA+ + +    +     
Sbjct: 129 KDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPL---TSYGTQKAICELLLSDYSRRGFF 185

Query: 162 PIVPV-YPGVIYGPGKLTTG--NLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGH 218
             + +  P +   PGK         + ++ E   G+        + R         V   
Sbjct: 186 DGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFL 245

Query: 219 IAAM----EKGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFC 259
           I       EK        + G +A+  +  +    + G       
Sbjct: 246 IHGAMIDVEKVGPRRNLSMPGLSATVGEQIEALRKVAGEKAVALI 290

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score =  107 bits (271), Expect = 3e-27
 Identities = 76/358 (21%), Positives = 131/358 (36%), Gaps = 77/358 (21%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD--ISGLPS--EGALELVYGDVTDY 56
           M++LV+G +G++G  +   LL +G  V  L     D   +G        +     D+ D 
Sbjct: 1   MRVLVTGGAGFIGSHIVEDLLARGLEVAVL-----DNLATGKRENVPKGVPFFRVDLRDK 55

Query: 57  RSLVDACFGCH--VIFHTAAL------VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVE 108
             +  A        + H AA       VE    DP   F VN+ G  N+++A ++   VE
Sbjct: 56  EGVERAFREFRPTHVSHQAAQASVKVSVE----DPVLDFEVNLLGGLNLLEACRQYG-VE 110

Query: 109 KIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ----YERSKAVADKIALQAASE--GLP 162
           K+++ S+    G+  G + +  +  E   +  +    Y  SKA  +   L    +  GL 
Sbjct: 111 KLVFAST---GGAIYGEVPEGERAEET--WPPRPKSPYAASKAAFEHY-LSVYGQSYGLK 164

Query: 163 IVPVYPGVIYGPGKLTTG--NLVAKLMIERFNGRLPGYIGYGNDRFS-------FCHVDD 213
            V +  G +YGP +   G   +VA +  ER    LP  + Y             + +V D
Sbjct: 165 WVSLRYGNVYGPRQDPHGEAGVVA-IFAERVLKGLPVTL-YARKTPGDEGCVRDYVYVGD 222

Query: 214 VVDGHIAAMEKGRSGERY-LLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWIL 272
           V + H  A+        Y + TGE  +  ++    A   G +                  
Sbjct: 223 VAEAHALALFSLE--GIYNVGTGEGHTTREVLMAVAEAAGKAPEV--------------- 265

Query: 273 VFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSS 329
                  G L          +      S +K     G+ P+   +EG++  +   R +
Sbjct: 266 QPAPPRPGDLE-------RSVL-----SPLKLM-AHGWRPKVGFQEGIRLTVDHFRGA 310

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score =  107 bits (270), Expect = 4e-27
 Identities = 70/353 (19%), Positives = 120/353 (33%), Gaps = 79/353 (22%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRA---LVRRTSDISGLPSEGALELVYGDVTDYR 57
           M+IL++G +G LG  L    L QGH +         T     LP    L ++ G VTD  
Sbjct: 21  MRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA--TGKREVLPPVAGLSVIEGSVTD-A 77

Query: 58  SLVDACFGCH---VIFHTAAL---VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKII 111
            L++  F       + H+AA     +    D +   A NV+G  NV +AA +   V++++
Sbjct: 78  GLLERAFDSFKPTHVVHSAAAYKDPD----DWAEDAATNVQGSINVAKAASKAG-VKRLL 132

Query: 112 YTSSFFALGSTDGYIADENQVHEEKYFCTQ----YERSKAVADKIALQAASEGLPIVPV- 166
              +        G       +  +    T     Y  SK   +          +P+V + 
Sbjct: 133 NFQT----ALCYG-RPATVPIPID--SPTAPFTSYGISKTAGEAF---LMMSDVPVVSLR 182

Query: 167 YPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIG-YGNDRFSFCHVDDVVDGHIAAMEKG 225
              V  GP +L  G        +R       +      D   F  + D +     ++++G
Sbjct: 183 LANV-TGP-RLAIG--PIPTFYKRLKAGQKCFCSDTVRD---FLDMSDFLAIADLSLQEG 235

Query: 226 RSGERY-LLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPL 284
           R    + + TGE  S  ++FD+     G +                              
Sbjct: 236 RPTGVFNVSTGEGHSIKEVFDVVLDYVGAT------------------------------ 265

Query: 285 ISYPTVHV------LAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSSG 330
           ++ P   V      +         K +TE G+  +   K+ +   L W    G
Sbjct: 266 LAEPVPVVAPGADDVPSVVL-DPSKTETEFGWKAKVDFKDTITGQLAWYDKYG 317

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score =  107 bits (268), Expect = 5e-27
 Identities = 67/339 (19%), Positives = 118/339 (34%), Gaps = 53/339 (15%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS---------DISGLPSEGALELVYGD 52
           +IL+ GA+GY+G  +  A L  GH    LVR ++          +    + GA  +V+G 
Sbjct: 6   RILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGA-NIVHGS 64

Query: 53  VTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY 112
           + D+ SLV+A     V+  T               ++ +E   N+++A KE  TV K  +
Sbjct: 65  IDDHASLVEAVKNVDVVISTVG-------------SLQIESQVNIIKAIKEVGTV-KRFF 110

Query: 113 TSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIY 172
            S F         +     V E K           V   I     +EG+P   V      
Sbjct: 111 PSEFGNDVDNVHAVEPAKSVFEVK---------AKVRRAI----EAEGIPYTYVSSNCFA 157

Query: 173 GPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYL 232
           G       +L    +      ++   +G GN R  F   +D+    I A++  R+  + L
Sbjct: 158 GYF---LRSLAQAGLTAPPRDKVV-ILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTL 213

Query: 233 ---LTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPT 289
              L     S  ++  +       +  +  +P   +        F + I     +    +
Sbjct: 214 YLRLPANTLSLNELVALWEKKIDKTLEKAYVPEEEVLKLIADTPFPANI----SIAISHS 269

Query: 290 VHVLAHQWAYSCVKAKTEL-----GYNPRSLKEGLQEVL 323
           + V   Q  +    A  E           ++ E L   +
Sbjct: 270 IFVKGDQTNFEIGPAGVEASQLYPDVKYTTVDEYLSNFV 308

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score =  105 bits (265), Expect = 2e-26
 Identities = 70/350 (20%), Positives = 118/350 (33%), Gaps = 63/350 (18%)

Query: 3   ILVSGASGYLGGRLCHALLKQG-HSVRAL-----VRRTSDISGLPSEGALELVYGDVTDY 56
           I+V+G +G++G  +  AL  +G   +  +       +  ++  L    A  +   D    
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDL--NIADYMDKEDFLIQ 59

Query: 57  RSLVDACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
               +       IFH  A      W          N +  K ++    E +     +Y S
Sbjct: 60  IMAGEEFGDVEAIFHEGACSSTTEWDGKY--MMDNNYQYSKELLHYCLEREI--PFLYAS 115

Query: 115 SFFALGSTDGYIADENQVHEEKYFC--TQYERSKAVADKIALQAASE-GLPIVPVYPGV- 170
           S     +T G     + +   +Y      Y  SK + D+   Q   E    IV    G  
Sbjct: 116 S----AATYG-GRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIV----GFR 166

Query: 171 ---IYGPG---KLTTGNLVAKLMIERFNGRLPGYIGYGNDRFS--FCHVDDVVDGHIAAM 222
              +YGP    K +  ++   L  +  NG  P     G++ F   F +V DV D ++  +
Sbjct: 167 YFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLF-EGSENFKRDFVYVGDVADVNLWFL 225

Query: 223 EKGRSGERY-LLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGK 281
           E G SG  + L TG   SF  + D         +  + IP            F  ++ G+
Sbjct: 226 ENGVSG-IFNLGTGRAESFQAVADATLAYHKKGQIEY-IP------------FPDKLKGR 271

Query: 282 LPLISYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSSG 330
                       A          +      P  ++ EG+ E + WL    
Sbjct: 272 ------YQAFTQA-----DLTNLRAAGYDKPFKTVAEGVTEYMAWLNRDA 310

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345

 Score =  103 bits (259), Expect = 2e-25
 Identities = 59/364 (16%), Positives = 122/364 (33%), Gaps = 64/364 (17%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSL 59
           M++L+ G +G++G  L   LL++ H  V  L   +  IS   +      V GD++ +   
Sbjct: 1   MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEW 60

Query: 60  VDACFG-CHVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
           ++     C V+    A+  P  +  +P R F ++ E    +++   + +   +II+ S+ 
Sbjct: 61  IEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRK--RIIFPSTS 118

Query: 117 FALGSTDGYIADENQVHE--EKYF------------CTQYERSKAVADKIALQ-AASEGL 161
              G                E +                Y  SK + D++       EGL
Sbjct: 119 EVYG--------MCSDKYFDEDHSNLIVGPVNKPRWI--YSVSKQLLDRVIWAYGEKEGL 168

Query: 162 PIVPVYPGVIYGPG-------KLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV 214
                 P    GP        ++ +   + +L++    G     I  G  +  F  + D 
Sbjct: 169 QFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDG 228

Query: 215 VDGHIAAME--KGRSGERYLLTGENASFMQIFDMAAVI---TGTSRPRFCIPLWLIEAYG 269
           ++     +E    R     +  G   +   I ++  ++         R   P +      
Sbjct: 229 IEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVV 288

Query: 270 WILVFFSR----ITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLP 324
               ++ +    +  + P I                  A   L + P+  ++E + E L 
Sbjct: 289 ESSSYYGKGYQDVEHRKPSIR----------------NAHRCLDWEPKIDMQETIDETLD 332

Query: 325 WLRS 328
           +   
Sbjct: 333 FFLR 336

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score =  101 bits (253), Expect = 2e-25
 Identities = 60/299 (20%), Positives = 90/299 (30%), Gaps = 67/299 (22%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGLPSEGALELVYGDVTDYRS 58
             +LV+GASG  G  +   L +       + LVR       +  E   ++  GD+TD  S
Sbjct: 5   PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGE--ADVFIGDITDADS 62

Query: 59  LVDACFGCHVIFHTAALV---------------EPWLPDPSRFFAVNVEGLKNVVQAAKE 103
           +  A  G   +    + V               E    D      V+  G KN + AAK 
Sbjct: 63  INPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV 122

Query: 104 TKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPI 163
              V+ I+   S   +G               K         K  A++  L  +  G P 
Sbjct: 123 AG-VKHIVVVGS---MG------GTNPDHPLNKLGNGNILVWKRKAEQ-YLADS--GTPY 169

Query: 164 VPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAME 223
             +  G +          LV K                           DV +  I A  
Sbjct: 170 TIIRAGGLLDKEGGVRELLVGKDDE------------LLQTDTKTVPRADVAEVCIQA-- 215

Query: 224 KGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKL 282
                    L  E A   + FD+ +   GTS      P    +A       FS++T + 
Sbjct: 216 ---------LLFEEAKN-KAFDLGSKPEGTST-----PTKDFKAL------FSQVTSRF 253

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score =  101 bits (254), Expect = 2e-25
 Identities = 37/176 (21%), Positives = 64/176 (36%), Gaps = 14/176 (7%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           ++LV+GA+G +G  +   L    H VR             +E   E+V  D+ D +++ D
Sbjct: 4   RLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLG----AAEAHEEIVACDLADAQAVHD 59

Query: 62  ACFGCHVIFHTAAL-VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
               C  I H   + VE    D       N+ G  N+ +AA+      +I++ SS   +G
Sbjct: 60  LVKDCDGIIHLGGVSVERPWNDI---LQANIIGAYNLYEAARNLG-KPRIVFASSNHTIG 115

Query: 121 STDGYI-ADENQVHEEKYFCTQYERSKAVADKIALQ-AASEGLPIVPVYPGVIYGP 174
                   D             Y  SK   + +A        +  + +  G  +  
Sbjct: 116 YYPRTTRIDTEVPRRPDSL---YGLSKCFGEDLASLYYHKFDIETLNIRIGSCFPK 168

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score =  103 bits (258), Expect = 3e-25
 Identities = 61/356 (17%), Positives = 115/356 (32%), Gaps = 71/356 (19%)

Query: 1   MKILVSGASGYLGGRLCHALLKQG--HSVRAL-------------VRRTSDISGLPSEGA 45
             IL++G +G++G  L     +      V  L                      L     
Sbjct: 11  QTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKG 70

Query: 46  LELVYGDVTDYRSLVD-ACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKET 104
            E++  D+ +   L          +FH AA+ +  + +       N +   N+++ A+  
Sbjct: 71  -EVIAADINNPLDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSK 129

Query: 105 KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF--CTQYERSKAVADKIALQAASEGLP 162
           K   K+IY SS         Y   +      K       Y  SK   D+    + S    
Sbjct: 130 KA--KVIYASS----AGV--YGNTKAPNVVGKNESPENVYGFSKLCMDEFV-LSHSNDNV 180

Query: 163 IVPVYPGV----IYGPG---KLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV 215
            V    G+    +YGP    K  T ++V +L +     +      +G     F +++DV+
Sbjct: 181 QV----GLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVI 236

Query: 216 DGHIAAMEKGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFF 275
             ++ AM+  +SG   +   +  S+ +I  +                             
Sbjct: 237 QANVKAMKAQKSGVYNVGYSQARSYNEIVSI----------------------------L 268

Query: 276 SRITGKLPLISYPTVHVL--AHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRS 328
               G   +      +     H  A        +L Y P   L+ G+++ LP + +
Sbjct: 269 KEHLGDFKVTYIKNPYAFFQKHTQA-HIEPTILDLDYTPLYDLESGIKDYLPHIHA 323

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 98.6 bits (246), Expect = 4e-24
 Identities = 38/176 (21%), Positives = 61/176 (34%), Gaps = 14/176 (7%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           ++LV+GA+G LG  +   L      +R       D    P+    E V  D+ D  ++  
Sbjct: 5   RLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLD----PAGPNEECVQCDLADANAVNA 60

Query: 62  ACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS 121
              GC  I H             +    N+ GL N+ +AA+      +I++ SS      
Sbjct: 61  MVAGCDGIVHLGG--ISVEKPFEQILQGNIIGLYNLYEAARAHG-QPRIVFASS----NH 113

Query: 122 TDGYIADENQVHEEKYFCTQ--YERSKAVADKIALQ-AASEGLPIVPVYPGVIYGP 174
           T GY     ++  +        Y  SK   + +A       G     V  G     
Sbjct: 114 TIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFDKFGQETALVRIGSCTPE 169

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 98.9 bits (247), Expect = 1e-23
 Identities = 67/358 (18%), Positives = 112/358 (31%), Gaps = 68/358 (18%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRAL----------VRRTSDISGLPSEGALELVYG 51
             L++G +G++G  L   LLK    V  L          +     +           + G
Sbjct: 27  TWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEG 86

Query: 52  DVTDYRSLVDACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEK 109
           D+ D  +      G   + H AAL  V   + DP    A N+ G  N++ AAK  + V+ 
Sbjct: 87  DIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQ-VQS 145

Query: 110 IIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPIVPVYP 168
             Y +S    G        E  +         Y  +K V +  A   A   G   +    
Sbjct: 146 FTYAASSSTYGDHPALPKVEENIGNPLSP---YAVTKYVNEIYAQVYARTYGFKTI---- 198

Query: 169 GV----IYGPG---KLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAA 221
           G+    ++G           ++ K       G      G G     FC++D+V+  +I +
Sbjct: 199 GLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILS 258

Query: 222 MEKGRS--GERY-LLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRI 278
                S     Y +  G+  +  ++                     I             
Sbjct: 259 ALAKDSAKDNIYNVAVGDRTTLNELSGY------------------IY----------DE 290

Query: 279 TGKLPLISYPTVHVLA-------HQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRS 328
              +  I   ++           H  A    KA   L Y P   ++EGL+  +PW   
Sbjct: 291 LNLIHHIDKLSIKYREFRSGDVRHSQA-DVTKAIDLLKYRPNIKIREGLRLSMPWYVR 347

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 96.2 bits (239), Expect = 1e-23
 Identities = 27/236 (11%), Positives = 65/236 (27%), Gaps = 23/236 (9%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKI V GA+G  G  +     ++GH V A+VR     +                      
Sbjct: 1   MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATV---ATLVKEPLVLTE 57

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
                   +    +     +P  S    ++++   ++V   + +     +    S     
Sbjct: 58  ADLDSVDAVVDALS-----VPWGSGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAM 111

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTG 180
               +    +                   +   LQ  +  +  + + P   +  G  T+ 
Sbjct: 112 PGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNA-NVNWIGISPSEAFPSGPATSY 170

Query: 181 NLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR-SGERYLLTG 235
                 ++   +G+            S     ++    +  +E      +R ++  
Sbjct: 171 VAGKDTLLVGEDGQ------------SHITTGNMALAILDQLEHPTAIRDRIVVRD 214

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 95.7 bits (238), Expect = 8e-23
 Identities = 51/338 (15%), Positives = 105/338 (31%), Gaps = 57/338 (16%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD----ISGLPSEGALELVYGDVTDYR 57
           KIL+ G +GY+G  +    LK GH      R  S     +    S GA  +V G++ ++ 
Sbjct: 13  KILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGA-IIVKGELDEHE 71

Query: 58  SLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
            LV+      V+    A                +     +++A K    +++ + +    
Sbjct: 72  KLVELMKKVDVVISALA-------------FPQILDQFKILEAIKVAGNIKRFLPSD--- 115

Query: 118 ALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYG---P 174
                  +  +E++++    F    ER + +   I        +P   V           
Sbjct: 116 -------FGVEEDRINALPPFEALIERKRMIRRAI----EEANIPYTYVSANCFASYFIN 164

Query: 175 GKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGER---Y 231
             L   +   ++ +           G G  +F+  +  D+    I      R+  R   Y
Sbjct: 165 YLLRPYDPKDEITV----------YGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIY 214

Query: 232 LLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVH 291
             +    + +++        G    +  +P   I A    L     I    P+     + 
Sbjct: 215 RPSTNIITQLELISRWEKKIGKKFKKIHVPEEEIVALTKELPEPENI----PIAILHCLF 270

Query: 292 VLAHQWAYSCVKAKTEL-----GYNPRSLKEGLQEVLP 324
           +     +Y   +   E           ++ E L   + 
Sbjct: 271 IDGATMSYDFKENDVEASTLYPELKFTTIDELLDIFVH 308

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 94.1 bits (234), Expect = 8e-23
 Identities = 37/242 (15%), Positives = 74/242 (30%), Gaps = 41/242 (16%)

Query: 1   MKILVSGASGYLGGRLCHALL-KQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSL 59
             +L+ GA G +   + + L  KQ        R+ + I       + +++ GDV ++ +L
Sbjct: 24  KNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNS-QIIMGDVLNHAAL 82

Query: 60  VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
             A  G  +++                         +V+ A K    V+++I+  S    
Sbjct: 83  KQAMQGQDIVYANLT------------GEDLDIQANSVIAAMKACD-VKRLIFVLSLGIY 129

Query: 120 GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTT 179
               G   + N     +       +    A    ++A+  GL     Y   I  P  LT 
Sbjct: 130 DEVPGKFVEWNNAVIGEPL-----KPFRRAADA-IEAS--GLE----Y--TILRPAWLTD 175

Query: 180 GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEK--GRSGERYLLTGEN 237
            +++   +  R        +              V       ++K     GE   +    
Sbjct: 176 EDIIDYELTSRNEPFKGTIV----------SRKSVAALITDIIDKPEKHIGENIGINQPG 225

Query: 238 AS 239
             
Sbjct: 226 TD 227

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 95.1 bits (237), Expect = 3e-22
 Identities = 58/342 (16%), Positives = 112/342 (32%), Gaps = 45/342 (13%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRAL-VRRTSDISGLPSEGALELVYGDVTDYRSL 59
           +KI ++GA G++   +   L  +GH V A   ++   ++        E    D+    + 
Sbjct: 30  LKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED--MFCDEFHLVDLRVMENC 87

Query: 60  VDACFGCHVIFHTAALVEP---WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
           +    G   +F+ AA +        + S     N     N+++AA+    +++  Y SS 
Sbjct: 88  LKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASSA 146

Query: 117 FALGSTDGYIADENQVHEEKYFCTQ----YERSKAVADKIALQAASE-GLPIVPVYPGVI 171
                          + E   +  +    +   K   +++      + G+         I
Sbjct: 147 CIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNI 206

Query: 172 YGPG---KLTTGNLVAKLMIERFNGRLPGYI-GYGNDRFSFCHVDDVVDGHIAAMEKGRS 227
           YGP    K       A    +         + G G    SF  +D+ V+G +   +    
Sbjct: 207 YGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFR 266

Query: 228 GERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISY 287
               + + E  S  ++ +M         P   IP       G        + G+    + 
Sbjct: 267 EPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPE----G--------VRGRNSDNN- 313

Query: 288 PTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRS 328
                            K +LG+ P   LKEGL+    W++ 
Sbjct: 314 ---------------LIKEKLGWAPNMRLKEGLRITYFWIKE 340

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 93.4 bits (232), Expect = 4e-22
 Identities = 52/273 (19%), Positives = 97/273 (35%), Gaps = 43/273 (15%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGAL---------ELVYGD 52
           KIL+ G +G +G  +  A +K G+   ALVR+T   +   ++  L          L+ GD
Sbjct: 4   KILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGD 63

Query: 53  VTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY 112
           + D+ +LV A     ++   A               + +E    +++A KE   V K  +
Sbjct: 64  INDHETLVKAIKQVDIVICAAG-------------RLLIEDQVKIIKAIKEAGNV-KKFF 109

Query: 113 TSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIY 172
            S F         +    QV EEK          ++   I     +EG+P   +      
Sbjct: 110 PSEFGLDVDRHDAVEPVRQVFEEK---------ASIRRVI----EAEGVPYTYLCCHAFT 156

Query: 173 GPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYL 232
           G       NL      +    ++   +G GN + ++    DV    I A     +  + +
Sbjct: 157 G---YFLRNLAQLDATDPPRDKVV-ILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAV 212

Query: 233 ---LTGENASFMQIFDMAAVITGTSRPRFCIPL 262
              L     +  ++  +     G +  +  +  
Sbjct: 213 HIRLPKNYLTQNEVIALWEKKIGKTLEKTYVSE 245

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 93.1 bits (232), Expect = 5e-22
 Identities = 43/254 (16%), Positives = 89/254 (35%), Gaps = 40/254 (15%)

Query: 1   MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSL 59
           M I+++GA+G+LG  + +  +          VR    +          +   D  +  S+
Sbjct: 1   MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKV-SVRQLDYFNQESM 59

Query: 60  VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
           V+A  G   +      +   +    +     +  ++N+V AAK++  V  II+   +   
Sbjct: 60  VEAFKGMDTVV----FIPSIIHPSFK----RIPEVENLVYAAKQSG-VAHIIFIGYYADQ 110

Query: 120 GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTT 179
            +   +++                          L  +  G+    V    +Y       
Sbjct: 111 HNNPFHMSPYFGYASR-----------------LLSTS--GIDYTYVRMA-MY------M 144

Query: 180 GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAM-EKGRSGERYLLTGENA 238
             L   L       +L    G G  R ++   +D+  G IA +      G+RYLL+G + 
Sbjct: 145 DPLKPYLPELMNMHKLIYPAGDG--RINYITRNDIARGVIAIIKNPDTWGKRYLLSGYSY 202

Query: 239 SFMQIFDMAAVITG 252
              ++  + +  +G
Sbjct: 203 DMKELAAILSEASG 216

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score = 94.2 bits (234), Expect = 7e-22
 Identities = 39/230 (16%), Positives = 65/230 (28%), Gaps = 40/230 (17%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           M I+++GA G++G  L   L                                 T    L 
Sbjct: 1   MNIVITGAKGFVGKNLKADLTSTTDHHI-------------------FEVHRQTKEEELE 41

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
            A      I H A +          F   NV  L +V+           I+ +SS     
Sbjct: 42  SALLKADFIVHLAGV--NRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSS----- 94

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPIVPVYPGVIYGPGKLTT 179
                      +   +     Y  SK   +++  + A E G  +       ++G      
Sbjct: 95  -----------IQATQD--NPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPN 141

Query: 180 GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGE 229
            N V      +        +   N   +  +VDD+V     A+E   + E
Sbjct: 142 YNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPTIE 191

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 93.1 bits (231), Expect = 7e-22
 Identities = 42/273 (15%), Positives = 94/273 (34%), Gaps = 41/273 (15%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS--------DISGLPSEGALELVYGDV 53
           ++L+ G +GY+G R+ +A +  GH    L R            +      GA +L+   +
Sbjct: 6   RVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGA-KLIEASL 64

Query: 54  TDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYT 113
            D++ LVDA     V+    A             + ++     +V+A KE   +++ + +
Sbjct: 65  DDHQRLVDALKQVDVVISALA---------GGVLSHHILEQLKLVEAIKEAGNIKRFLPS 115

Query: 114 SSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYG 173
                      +  D + +       +     K    K+     +  +P   V   +  G
Sbjct: 116 E----------FGMDPDIMEHALQPGSITFIDKR---KVRRAIEAASIPYTYVSSNMFAG 162

Query: 174 --PGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERY 231
              G L   +       ++         G GN +  +   DDV    I +++  ++  + 
Sbjct: 163 YFAGSLAQLDGHMMPPRDKVL-----IYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKT 217

Query: 232 L---LTGENASFMQIFDMAAVITGTSRPRFCIP 261
           +         S  ++  +   ++  +  +  I 
Sbjct: 218 MYIRPPMNILSQKEVIQIWERLSEQNLDKIYIS 250

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 92.7 bits (230), Expect = 1e-21
 Identities = 46/339 (13%), Positives = 100/339 (29%), Gaps = 53/339 (15%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS---------GLPSEGALELVYGD 52
           KI++ G +GY+G  +  A L   H      R  +  S            S G   ++ G+
Sbjct: 6   KIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGV-TIIEGE 64

Query: 53  VTDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY 112
           + ++  +V       ++                     +    +++ A K    +++ + 
Sbjct: 65  MEEHEKMVSVLKQVDIVISALP-------------FPMISSQIHIINAIKAAGNIKRFLP 111

Query: 113 TSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIY 172
           +           +  +E+++     F +  E+ + +   I     +  LP   V      
Sbjct: 112 SD----------FGCEEDRIKPLPPFESVLEKKRIIRRAI----EAAALPYTYVSANCFG 157

Query: 173 GPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYL 232
                    L+        N  +    G G  +F   + +D+    I      R   R +
Sbjct: 158 AYF---VNYLLHPSPHPNRNDDIV-IYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIV 213

Query: 233 ---LTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPT 289
                    S  ++  +    +G S  +  +P   +      L     I    P+    +
Sbjct: 214 IYRPPKNIISQNELISLWEAKSGLSFKKVHMPDEQLVRLSQELPQPQNI----PVSILHS 269

Query: 290 VHVLAHQWAYSCVKAKTEL-----GYNPRSLKEGLQEVL 323
           + V     +Y   K   E           S+   L   +
Sbjct: 270 IFVKGDLMSYEMRKDDIEASNLYPELEFTSIDGLLDLFI 308

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 91.1 bits (226), Expect = 3e-21
 Identities = 63/329 (19%), Positives = 96/329 (29%), Gaps = 59/329 (17%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
             +L  G  GY    L  AL  QG  +    R    +  + + GA E +     +  SL 
Sbjct: 6   GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGA-EPLLWPGEE-PSLD 62

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
                 H++  TA       PD      +   G     Q A        + Y S+    G
Sbjct: 63  GV---THLLISTA-------PDSGGDPVLAALGD----QIAARAAQFRWVGYLSTTAVYG 108

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTG 180
             DG   DE              R +          A   LP+       IYGPG     
Sbjct: 109 DHDGAWVDETTPLTP-----TAARGRWRVMAEQQWQAVPNLPLHVFRLAGIYGPG----- 158

Query: 181 NLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLT-GENAS 239
               +    +        I      FS  HV+D+     A+M +   G  Y +   E   
Sbjct: 159 ----RGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMARPDPGAVYNVCDDEPVP 214

Query: 240 FMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFS---RITGKLPLISYPTVHVLAHQ 296
              +   AA + G   P   +     +       F+S   R+                  
Sbjct: 215 PQDVIAYAAELQGLPLPPA-VDFDKADLTPMARSFYSENKRV------------------ 255

Query: 297 WAYSCVKAKTELGYNPR--SLKEGLQEVL 323
                 + K ELG   +  + + GL+ + 
Sbjct: 256 ---RNDRIKEELGVRLKYPNYRVGLEALQ 281

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score = 91.2 bits (227), Expect = 4e-21
 Identities = 59/340 (17%), Positives = 116/340 (34%), Gaps = 45/340 (13%)

Query: 1   MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSE--GALELVYGDVTDYR 57
            KIL+ GA G +G  L   L K  G     ++   SDI  L ++   +      +  D+ 
Sbjct: 3   PKILIIGACGQIGTELTQKLRKLYGTEN--VI--ASDIRKLNTDVVNSGPFEVVNALDFN 58

Query: 58  SLVDACFGCH---VIFHTAALVE-PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYT 113
            + +     H    I+  AAL+      +P+  + +N+  L +V+  AK  K ++KI + 
Sbjct: 59  QI-EHLVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKK-IKKIFWP 116

Query: 114 SSFFALG-STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE-GLPIVPV-YPGV 170
           SS    G +T      +  + E     T Y  SK   ++      +  G+ +  + YPG+
Sbjct: 117 SSIAVFGPTTPKENTPQYTIMEPS---TVYGISKQAGERWCEYYHNIYGVDVRSIRYPGL 173

Query: 171 IYGPGKLTTGNL--VAKLMIERF-NGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRS 227
                    G     A  +  +    +          +    ++DD +D  I  M+    
Sbjct: 174 -ISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVE 232

Query: 228 GERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISY 287
             +   +   A+        A       P F              + +     +    S+
Sbjct: 233 KIKIHSSYNLAAMSFTPTEIANEIKKHIPEF-------------TITYEPDFRQKIADSW 279

Query: 288 PTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWL 326
           P              +A+ +  +     L+   ++++  L
Sbjct: 280 PAS--------IDDSQAREDWDWKHTFDLESMTKDMIEHL 311

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 90.5 bits (224), Expect = 1e-20
 Identities = 43/338 (12%), Positives = 109/338 (32%), Gaps = 50/338 (14%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-------DISGLPSEGALELVYGDVT 54
           ++L++GA+G++G  +  A L        L R              L  +GA  +VYG + 
Sbjct: 12  RVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGA-IIVYGLIN 70

Query: 55  DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
           +  ++        +    + +              ++     +V+A K   T+++ + + 
Sbjct: 71  EQEAMEKILKEHEIDIVVSTVGGE-----------SILDQIALVKAMKAVGTIKRFLPSE 119

Query: 115 SFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGP 174
                     +  D N+    +     Y   + V   +       G+P   +    I   
Sbjct: 120 ----------FGHDVNRADPVEPGLNMYREKRRVRQLV----EESGIPFTYICCNSIASW 165

Query: 175 GKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYL-- 232
                    ++++      ++    G GN +  F    D+    +  ++  R+  + +  
Sbjct: 166 P-YYNNIHPSEVLPPTDFFQIY---GDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHF 221

Query: 233 -LTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVH 291
             +    +  ++  +     G + PR  +    + A     +    +           + 
Sbjct: 222 RPSCNCLNINELASVWEKKIGRTLPRVTVTEDDLLAAAGENIIPQSVVAAF----THDIF 277

Query: 292 VLAHQWAYSCVKAK----TEL--GYNPRSLKEGLQEVL 323
           +   Q  +S    +    T L    + R+++E   E +
Sbjct: 278 IKGCQVNFSIDGPEDVEVTTLYPEDSFRTVEECFGEYI 315

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 86.0 bits (213), Expect = 4e-19
 Identities = 69/376 (18%), Positives = 106/376 (28%), Gaps = 97/376 (25%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS--GLPSEGALELVYGDVTDYRSLV 60
           I V GA+G  G  L       GH VRA V     +    L +   + L  G + +   L+
Sbjct: 8   IAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLM 67

Query: 61  DACF-GCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
           D  F G H+ F    +                   K++  AAK   T++  IY+S    +
Sbjct: 68  DTLFEGAHLAF----INTTSQAGDEIAIG------KDLADAAKRAGTIQHYIYSS----M 113

Query: 120 GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPG---------- 169
                Y           +        K   +   ++    GLP   VY G          
Sbjct: 114 PDHSLY---------GPWPAVPMWAPKFTVEN-YVRQL--GLPSTFVYAGIYNNNFTSLP 161

Query: 170 -VIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVD-GHIAA-----M 222
             ++    +  G        +  +  LP              +D   D G          
Sbjct: 162 YPLFQMELMPDGTFEWHAPFDP-DIPLP-------------WLDAEHDVGPALLQIFKDG 207

Query: 223 EKGRSGERYLLTGENASFMQIFDMAAVIT-GTSRP-----------RFCIPLWLIEAYGW 270
            +  +G R  LT E  S +Q   + A  +   +R            +  IP+   E    
Sbjct: 208 PQKWNGHRIALTFETLSPVQ---VCAAFSRALNRRVTYVQVPKVEIKVNIPVGYREQLEA 264

Query: 271 ILVFFSRITG---KLPLISYPTVHVLAHQWAY-------------------SCVKAKTEL 308
           I V F         LP  S P                                     +L
Sbjct: 265 IEVVFGEHKAPYFPLPEFSRPAAGSPKGLGPANGKGAGAGMMQGPGGVISQRVTDEARKL 324

Query: 309 GYNPRSLKEGLQEVLP 324
               R ++E  +EV P
Sbjct: 325 WSGWRDMEEYAREVFP 340

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score = 86.4 bits (214), Expect = 4e-19
 Identities = 67/390 (17%), Positives = 106/390 (27%), Gaps = 89/390 (22%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVR---ALVRRTSDISG-----LPSEGALE----- 47
            +++V G  GY G      L K+ + V     LVRR  D         P     +     
Sbjct: 12  SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRW 71

Query: 48  ---------LVYGDVTDYRSLVDACFGCH---VIFHTAAL--VEPWLPDPSRF---FAVN 90
                    L  GD+ D+   +   F       + H          + D SR       N
Sbjct: 72  KALTGKSIELYVGDICDF-EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNN 130

Query: 91  VEGLKNVVQAAKETKTVEKIIYTSSFFALG----STD-GYI-ADENQVHEEKYFCTQ--- 141
           V G  NV+ A KE      ++   +    G      + GYI    N   +   +  Q   
Sbjct: 131 VIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASS 190

Query: 142 -YERSKAVADKIALQAASE--GLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGR---- 194
            Y  SK       +    +  G+    +  GV+YG     T           ++      
Sbjct: 191 FYHLSKVHDSHN-IAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTA 249

Query: 195 LPGYIG----------YGND---RFSFCHVDDVVDGHIAAMEK-GRSGERYL--LTGENA 238
           L  +            YG     R  +  + D V     A+    ++GE  +     E  
Sbjct: 250 LNRFCVQAAVGHPLTVYGKGGQTR-GYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQF 308

Query: 239 SFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWA 298
           S  ++  +                          V   R+                H + 
Sbjct: 309 SVNELASLVTKAGSKLGLDVKKM----------TVPNPRVEA----------E--EHYYN 346

Query: 299 YSCVKAKTELGYNPR-SLKEGLQEVLPWLR 327
               K   ELG  P       L  +L +  
Sbjct: 347 AKHTKLM-ELGLEPHYLSDSLLDSLLNFAV 375

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 83.5 bits (207), Expect = 1e-18
 Identities = 53/256 (20%), Positives = 95/256 (37%), Gaps = 42/256 (16%)

Query: 1   MKILVSGASGYLGGRLCHALLKQ--GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRS 58
             I V+GA+G LGG +   LLK+     + A+VR     S L  +G  E+ +GD     S
Sbjct: 1   FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGV-EVRHGDYNQPES 59

Query: 59  LVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA 118
           L  A  G   +      +     D +      +    NVV+AA++   V+ I YT   FA
Sbjct: 60  LQKAFAGVSKLL----FISGPHYDNTL----LIVQHANVVKAARDAG-VKHIAYTGYAFA 110

Query: 119 LGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLT 178
             S    +A  +   E                  A++     +P   +    +Y     T
Sbjct: 111 EESIIP-LAHVHLATEY-----------------AIRTT--NIPYTFLRNA-LY-----T 144

Query: 179 TGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAM-EKGRSGERYLLTG-E 236
              +   L     +G +    G G    +    +++       + E+G   + Y L   +
Sbjct: 145 DFFVNEGLRASTESGAIVTNAGSG--IVNSVTRNELALAAATVLTEEGHENKTYNLVSNQ 202

Query: 237 NASFMQIFDMAAVITG 252
             +F ++  + + ++G
Sbjct: 203 PWTFDELAQILSEVSG 218

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 84.6 bits (209), Expect = 3e-18
 Identities = 50/267 (18%), Positives = 84/267 (31%), Gaps = 59/267 (22%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHS---VRALVRRTSDISG-------LPSEGA------- 45
           +L++GA+G+LG  L   LL++      +  LVR  SD            S          
Sbjct: 76  VLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFK 135

Query: 46  ------LELVYGDVT---------DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVN 90
                 LE+V GD +          +R L +      +I  +AA+V    P     F  N
Sbjct: 136 ELAADRLEVVAGDKSEPDLGLDQPMWRRLAET---VDLIVDSAAMVN-AFP-YHELFGPN 190

Query: 91  VEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHE--------EKYFCTQY 142
           V G   +++ A  TK      Y S+     + +     E+            +  +   Y
Sbjct: 191 VAGTAELIRIALTTKLK-PFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGY 249

Query: 143 ERSKAVADKIALQAASE-GLPIVPVYPGVIYGPGKLT----TGNLVAKLM--------IE 189
             SK   + +  +A     LP+     G+I             + V +++          
Sbjct: 250 GTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIAP 309

Query: 190 RFNGRLPGYIGYGNDRFSFCHVDDVVD 216
           R               F    V  V +
Sbjct: 310 RSFYEPDSEGNRQRAHFDGLPVTFVAE 336

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 81.7 bits (202), Expect = 6e-18
 Identities = 43/259 (16%), Positives = 85/259 (32%), Gaps = 41/259 (15%)

Query: 3   ILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDIS--GLPSEGALELVYGDVTDYRSL 59
           ++V G +G  GG +   LL+ G   VR + R     +   L  +GA E+V GD  D   +
Sbjct: 8   VVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGA-EVVQGDQDDQVIM 66

Query: 60  VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
             A  G +  F    +   W           V+  K +   A+    +  ++Y+      
Sbjct: 67  ELALNGAYATF---IVTNYWESCSQ---EQEVKQGKLLADLARRL-GLHYVVYSGLENIK 119

Query: 120 GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTT 179
             T G           +     ++  K   ++        G+P+  V     +       
Sbjct: 120 KLTAG-----------RLAAAHFD-GKGEVEEYFRDI---GVPMTSVRLPCYF------- 157

Query: 180 GNLVAKLMIERF--NGRLPGYIGYGNDRFSFCHVDDVVDGHIAA----MEKGRSGERYLL 233
            NL++  + ++          +  G+       V D+  G +      M +   G+   L
Sbjct: 158 ENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDL--GPVVLSLLKMPEKYVGQNIGL 215

Query: 234 TGENASFMQIFDMAAVITG 252
           +    +  +   +    T 
Sbjct: 216 STCRHTAEEYAALLTKHTR 234

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 79.5 bits (196), Expect = 2e-17
 Identities = 40/237 (16%), Positives = 70/237 (29%), Gaps = 30/237 (12%)

Query: 1   MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLPSEGALELVYGDVTDYRS 58
             + + GASG  G  L   +L+QG    V  + RR        +   +     D      
Sbjct: 19  KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFD-EEAYKNVNQEVVDFEKLDD 77

Query: 59  LVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA 118
              A  G  V F               F  V+ + +    + AK     +     SS  A
Sbjct: 78  YASAFQGHDVGFCCLG-TTRGKAGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGA 135

Query: 119 LGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLT 178
             S++                  Y + K   +    +   +   +    PGV+    +  
Sbjct: 136 DKSSNFL----------------YLQVKGEVEAKVEELKFDRYSV--FRPGVLLCDRQ-- 175

Query: 179 TGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTG 235
             +   + ++ +F G LP              V  VV   +  + + R  +  LL  
Sbjct: 176 -ESRPGEWLVRKFFGSLPDSWA----SGHSVPVVTVVRAMLNNVVRPRDKQMELLEN 227

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343

 Score = 80.5 bits (199), Expect = 3e-17
 Identities = 54/248 (21%), Positives = 102/248 (41%), Gaps = 37/248 (14%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRAL----VRRTSDISGLPSEGALELVYGDVTDY 56
            +IL++G +G++G  L   L+  GH V  +      R  ++         EL+  DV + 
Sbjct: 28  KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 87

Query: 57  RSL-VDACFGCHVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYT 113
             + VD       I+H A+   P  ++ +P +    N  G  N++  AK      +++  
Sbjct: 88  LYIEVDQ------IYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--RLLLA 139

Query: 114 SSFFALGSTDGYIADENQVH--EEKYFCTQ--------YERSKAVADKIALQAASE-GLP 162
           S+          +  + +VH   E Y+           Y+  K VA+ +      + G+ 
Sbjct: 140 ST--------SEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVE 191

Query: 163 IVPVYPGVIYGPG-KLTTGNLVAKLMIERFNGR-LPGYIGYGNDRFSFCHVDDVVDGHIA 220
           +        +GP   +  G +V+  +++   G  L  Y G G+   +F +V D+V+G +A
Sbjct: 192 VRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVY-GSGSQTRAFQYVSDLVNGLVA 250

Query: 221 AMEKGRSG 228
            M    S 
Sbjct: 251 LMNSNVSS 258

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 79.6 bits (197), Expect = 3e-17
 Identities = 67/340 (19%), Positives = 113/340 (33%), Gaps = 78/340 (22%)

Query: 3   ILVSGASGYLGGRLCHALLKQ--GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           I ++GA+G LG  +  +L+K      + A+VR  +    L ++G   +   D  D  +L 
Sbjct: 2   IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGI-TVRQADYGDEAALT 60

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
            A  G   +     L+       S          +NV+ AAK    V+ I YTS   A  
Sbjct: 61  SALQGVEKLL----LI------SSSEVGQRAPQHRNVINAAKAAG-VKFIAYTSLLHADT 109

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTG 180
           S  G +ADE+   E+                  L  +  G+    +  G  Y      + 
Sbjct: 110 SPLG-LADEHIETEK-----------------MLADS--GIVYTLLRNG-WY------SE 142

Query: 181 NLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAM-EKGRSGERYLLTGENA- 238
           N +A       +G   G  G G  + +     D        + E G  G+ Y L G++A 
Sbjct: 143 NYLASAPAALEHGVFIGAAGDG--KIASATRADYAAAAARVISEAGHEGKVYELAGDSAW 200

Query: 239 SFMQIFDMAAVITGT--------------SRPRFCIPLWLIEAYGWILVFFSRI-TGKLP 283
           +  Q+       +G               +     +P  L +    +         G L 
Sbjct: 201 TLTQLAAELTKQSGKQVTYQNLSEADFAAALKSVGLPDGLADM---LADSDVGASKGGLF 257

Query: 284 LISYPTVHVLAHQWAYSCVKAKTELGYNPRSLKEGLQEVL 323
             S  T+  L              +G+   +L E +  + 
Sbjct: 258 DDS-KTLSKL--------------IGHPTTTLAESVSHLF 282

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 77.8 bits (191), Expect = 6e-17
 Identities = 25/187 (13%), Positives = 52/187 (27%), Gaps = 25/187 (13%)

Query: 2   KILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGA--LELVYGDVTDYRS 58
            I + GA+G +   L   LL      +    R+              + ++ G   +   
Sbjct: 7   YITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGX 66

Query: 59  LVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA 118
           L  A     V+F  A                +   + ++V+A      + ++I  S    
Sbjct: 67  LEQAVTNAEVVFVGA--------------MESGSDMASIVKALSRXN-IRRVIGVSMAGL 111

Query: 119 LGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLT 178
            G     +               Y + +  A  +        L    +    +Y   + T
Sbjct: 112 SGEFPVALEKWT----FDNLPISYVQGERQARNV---LRESNLNYTILRLTWLYNDPEXT 164

Query: 179 TGNLVAK 185
              L+ +
Sbjct: 165 DYELIPE 171

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357

 Score = 73.3 bits (180), Expect = 9e-15
 Identities = 64/345 (18%), Positives = 130/345 (37%), Gaps = 44/345 (12%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVR--ALVRRTS----DISGLPSEGALELVYGDVTD 55
           ++ V+G +G+ GG L   L   G +V+  +L   T     + + +     ++   GD+ D
Sbjct: 11  RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV--ADGMQSEIGDIRD 68

Query: 56  YRSLVDAC--FGCHVIFHTAA--LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKII 111
              L+++   F   ++FH AA  LV     +P   ++ NV G   +++A +    V+ ++
Sbjct: 69  QNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVV 128

Query: 112 YTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD----------KIALQAASEGL 161
             +S     + +       + +E       Y  SK  A+                   G 
Sbjct: 129 NITSDKCYDNKEWIW--GYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGT 186

Query: 162 PIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAA 221
            +  V  G + G G      +V  ++      + P  I   +    + HV + + G++  
Sbjct: 187 AVATVRAGNVIGGGDWALDRIVPDILRAFEQSQ-PVIIRNPHAIRPWQHVLEPLSGYLLL 245

Query: 222 MEKGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGK 281
            +K        L  + A + + ++      G +         ++E     +V +      
Sbjct: 246 AQK--------LYTDGAEYAEGWNF-----GPNDADATPVKNIVE----QMVKYWGEGAS 288

Query: 282 LPLISYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPW 325
             L      H   +     C KAK +LG++PR +L   L+ ++ W
Sbjct: 289 WQLDGNAHPHEAHYL-KLDCSKAKMQLGWHPRWNLNTTLEYIVGW 332

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 66.2 bits (162), Expect = 5e-13
 Identities = 43/252 (17%), Positives = 79/252 (31%), Gaps = 55/252 (21%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVR--ALVRRTSDISGLPSEGALELVYGDVTDYRS 58
            ++L++GA+G  G  L   +L +    +  A  R+        +      +   V     
Sbjct: 6   KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARK--------ALAEHPRLDNPVGPLAE 57

Query: 59  L-------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKII 111
           L       +D  F C       A           F AV+ +    V + A E       +
Sbjct: 58  LLPQLDGSIDTAFCCLGTTIKEA------GSEEAFRAVDFDLPLAVGKRALEMG-ARHYL 110

Query: 112 YTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVI 171
             S   ALG      AD             Y R K   ++   +     L I    P ++
Sbjct: 111 VVS---ALG------ADAKSS-------IFYNRVKGELEQALQEQGWPQLTI--ARPSLL 152

Query: 172 YGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERY 231
           +GP +      +A+++       LPG       ++      D+         +   G R+
Sbjct: 153 FGPRE---EFRLAEILAAPIARILPG-------KYHGIEACDLARALWRLALEEGKGVRF 202

Query: 232 LLTGENASFMQI 243
           +   E+    ++
Sbjct: 203 V---ESDELRKL 211

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score = 66.6 bits (163), Expect = 2e-12
 Identities = 46/238 (19%), Positives = 78/238 (32%), Gaps = 46/238 (19%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           + + ++G+ G +G  L   L   GH V  LVR+                + D        
Sbjct: 148 LTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGK---------RFWD--PLNPAS 196

Query: 61  DACFGCHVIFHTAA--LVEPWLPD------PSRFFAVNVEGLKNVVQAAKETKTVEKIIY 112
           D   G  V+ H A   +   +          SR     V   K + +   E+     +I 
Sbjct: 197 DLLDGADVLVHLAGEPIFGRFNDSHKEAIRESR-----VLPTKFLAELVAESTQCTTMIS 251

Query: 113 TSSFFALG----STDGYIADENQVHEEKYF---CTQYERSKAVADKIALQAASEGLPIVP 165
            S   A+G         I  E     + +    C  +E +          A+  G  +  
Sbjct: 252 AS---AVGFYGHDRGDEILTEESESGDDFLAEVCRDWEHA-------TAPASDAGKRVAF 301

Query: 166 VYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAME 223
           +  GV         G ++   +   F+  L G  G G   FS+  +DD+ D +  A+ 
Sbjct: 302 IRTGVALSGR----GGMLPL-LKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIV 354

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344

 Score = 61.5 bits (150), Expect = 6e-11
 Identities = 40/183 (21%), Positives = 67/183 (36%), Gaps = 33/183 (18%)

Query: 2   KILVSGASGYLGGRLCHALLKQGH--SVRALVR---RTSDISGLPSEGALELVYGDVTDY 56
            IL++G +G  G      +L   +   +    R   + S+++   ++  +    GDV D 
Sbjct: 23  TILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDL 82

Query: 57  RSLVDACFGCHVIFHTAAL--VEPWLP----DPSRFFAVNVEGLKNVVQAAKETKTVEKI 110
             L  A  G  +  H AAL  V    P    +P      N+ G  NV+ A  +   + ++
Sbjct: 83  ERLNYALEGVDICIHAAALKHV----PIAEYNPLECIKTNIMGASNVINACLKNA-ISQV 137

Query: 111 IYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGV 170
           I  S       TD      N           Y  +K  +DK+ + A +        +  V
Sbjct: 138 IALS-------TDKAANPINL----------YGATKLCSDKLFVSANNFKGSSQTQFSVV 180

Query: 171 IYG 173
            YG
Sbjct: 181 RYG 183

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699

 Score = 60.1 bits (146), Expect = 4e-10
 Identities = 57/306 (18%), Positives = 93/306 (30%), Gaps = 135/306 (44%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSV----------RALVRRTSDISGLPSEGALELVY 50
             +LV+G +GY+G      L++ G+               V R   ++       +    
Sbjct: 12  KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTK----HHIPFYE 67

Query: 51  GDVTDYRSLVDACFGCH----VIFHTAAL------VEPWLPDPSRFFAVNVEGLKNVVQA 100
            D+ D R  ++  F  +    VI H A L       +     P R++  N+ G   +++ 
Sbjct: 68  VDLCD-RKGLEKVFKEYKIDSVI-HFAGLKAVGESTQ----IPLRYYHNNILGTVVLLEL 121

Query: 101 AKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEG 160
            ++   V K +++SS                        T Y  +    + I +    E 
Sbjct: 122 MQQYN-VSKFVFSSS-----------------------ATVYGDATRFPNMIPI---PEE 154

Query: 161 LPIVPVYPGVIYGPGKLTTGNLVAKLMIER--------------------FNGRLP---- 196
            P+ P  P   YG     T     K  IE                     FN   P    
Sbjct: 155 CPLGPTNP---YG----HT-----KYAIENILNDLYNSDKKSWKFAILRYFN---PIGAH 199

Query: 197 --GYIG---------------------------YGND---------RFSFCHVDDVVDGH 218
             G IG                           +G+D         R  + HV D+  GH
Sbjct: 200 PSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIR-DYIHVVDLAKGH 258

Query: 219 IAAMEK 224
           IAA++ 
Sbjct: 259 IAALQY 264

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330

 Score = 58.6 bits (143), Expect = 6e-10
 Identities = 63/306 (20%), Positives = 110/306 (35%), Gaps = 81/306 (26%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSV----------RALVRRTSDISGLPSEGALELVY 50
             IL+ G +GY+G      L+ +G SV             +               +   
Sbjct: 2   NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITE-----------GAKFYN 50

Query: 51  GDVTDYRSLVDACFGCHVI---FHTAAL------VEPWLPDPSRFFAVNVEGLKNVVQAA 101
           GD+ D ++ +   F    I    H AA       +E     P +++  NV G   +++  
Sbjct: 51  GDLRD-KAFLRDVFTQENIEAVMHFAADSLVGVSME----KPLQYYNNNVYGALCLLEVM 105

Query: 102 KETKTVEKIIYTSSFFALGSTDGY-IADENQVHEEKYFCTQ----YERSKAVADKIALQ- 155
            E K V+K I+ SS  A      Y   D + + EE    T     Y  +K   +K+ L  
Sbjct: 106 DEFK-VDKFIF-SSTAAT-----YGEVDVDLITEE--TMTNPTNTYGETKLAIEKM-LHW 155

Query: 156 -AASEGLPIV------PV--YP-GVIYGPGKLTTG--NLVAKLMIERFNGRLPGYIGYGN 203
            + +  L              P G+I   G+      +L+  L+++   G+    + +G+
Sbjct: 156 YSQASNLRYKIFRYFNVAGATPNGII---GEDHRPETHLI-PLVLQVALGQREKIMMFGD 211

Query: 204 D---------RFSFCHVDDVVDGHIAAMEKGRSGERYLL----TGENASFMQIFDMAAVI 250
           D         R  + HV+D+V  H   ++  ++G          G   S  +I D    +
Sbjct: 212 DYNTPDGTCIR-DYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREV 270

Query: 251 TGTSRP 256
           T    P
Sbjct: 271 TNHEIP 276

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* Length = 338

 Score = 57.1 bits (139), Expect = 2e-09
 Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 31/135 (22%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSV----------RALVRRTSDISGLPSEGALELVY 50
           M++LV+G SGY+G   C  LL+ GH V          R+++     + G         V 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKH----PTFVE 56

Query: 51  GDVTDYRSLVDACFGCH----VIFHTAAL------VEPWLPDPSRFFAVNVEGLKNVVQA 100
           GD+ +  +L+      H    VI H A L      V+     P  ++  NV G   ++ A
Sbjct: 57  GDIRN-EALMTEILHDHAIDTVI-HFAGLKAVGESVQ----KPLEYYDNNVNGTLRLISA 110

Query: 101 AKETKTVEKIIYTSS 115
            +    V+  I++SS
Sbjct: 111 MRAAN-VKNFIFSSS 124

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A Length = 315

 Score = 56.5 bits (137), Expect = 3e-09
 Identities = 26/121 (21%), Positives = 44/121 (36%), Gaps = 21/121 (17%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
            ++LV+GA+G LG  +     +          R             ++   ++ D  ++ 
Sbjct: 3   RRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFR------RARPKFEQV---NLLDSNAVH 53

Query: 61  DAC--FGCHVIFHTAA-----LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYT 113
                F  HVI H AA     +VE     P     +NV+   N+ + A        +IY 
Sbjct: 54  HIIHDFQPHVIVHCAAERRPDVVE---NQPDAASQLNVDASGNLAKEAAAVGA--FLIYI 108

Query: 114 S 114
           S
Sbjct: 109 S 109

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347

 Score = 56.4 bits (137), Expect = 3e-09
 Identities = 69/378 (18%), Positives = 132/378 (34%), Gaps = 91/378 (24%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVR---ALVRR--TSDISGLPSEGALELVYGDVTD 55
            K+L++G  G+LG  L    L QG  +     L R+  T ++  L S G  E V+GD+ +
Sbjct: 2   AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRN 61

Query: 56  YRSLVDACFGCH---VIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKI 110
            ++ V      +     FH A    +   + +P   F +NV G  N+++A ++  +   I
Sbjct: 62  -KNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNI 120

Query: 111 IYTS-----------SFFALGSTDGYIADENQVHEE-KY-FCTQYERSKAVADKIALQAA 157
           IY+S            +    +    +   N   E  +  F + Y  SK  AD+  L   
Sbjct: 121 IYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYML-DY 179

Query: 158 SE--GLPIVPVYPGV-----IYGPGKLTTGN--LVAKLMI------ERFNGR-LPGYIGY 201
           +   GL  V     V     +YG  +  T +   V           +    +      G 
Sbjct: 180 ARIFGLNTV-----VFRHSSMYGGRQFATYDQGWVG-WFCQKAVEIKNGINKPFTIS-GN 232

Query: 202 GN---DRFSFCHVDDVVDGHIAAMEKGR--SGERYLLTGENASFMQIFDMAAVITGTSRP 256
           G    D     H +D++  +  A+       G  + + G   + + + ++  ++      
Sbjct: 233 GKQVRD---VLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLL------ 283

Query: 257 RFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHV---LAHQWAYS--CVKAKTELGYN 311
                                        +     +    + Q  +     K    + ++
Sbjct: 284 -------------------EDYCNIDMRFTN----LPVRESDQRVFVADIKKITNAIDWS 320

Query: 312 PR-SLKEGLQEVLPWLRS 328
           P+ S K+G+Q++  W  S
Sbjct: 321 PKVSAKDGVQKMYDWTSS 338

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660

 Score = 57.0 bits (138), Expect = 3e-09
 Identities = 46/236 (19%), Positives = 95/236 (40%), Gaps = 24/236 (10%)

Query: 1   MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSL 59
            ++L+ G +G++G  L   LL++  + V  L   +  IS   +      V GD++ +   
Sbjct: 316 TRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEW 375

Query: 60  VDACFG-CHVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
           ++     C V+    A+  P  +  +P R F ++ E    +++   + +  ++II+ S+ 
Sbjct: 376 IEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTS 433

Query: 117 FALGSTDGYIADENQ-------VHEEKYFCTQYERSKAVADK-IALQAASEGLPIVPVYP 168
              G       DE+        V++ ++    Y  SK + D+ I      EGL      P
Sbjct: 434 EVYGMCSDKYFDEDHSNLIVGPVNKPRWI---YSVSKQLLDRVIWAYGEKEGLQFTLFRP 490

Query: 169 GVIYGPG-------KLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDG 217
               GP        ++ +   + +L++    G     I  G  +  F  + D ++ 
Sbjct: 491 FNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEA 546

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} Length = 341

 Score = 54.4 bits (132), Expect = 1e-08
 Identities = 34/135 (25%), Positives = 56/135 (41%), Gaps = 31/135 (22%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSV----------RALVRRTSDISGLPSEGALELVY 50
             ILV+G +GY+G      LL  G+ V          R  + R   I+G           
Sbjct: 6   GTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITG----KTPAFHE 61

Query: 51  GDVTDYRSLVDACFGCH----VIFHTAAL------VEPWLPDPSRFFAVNVEGLKNVVQA 100
            DV+D    +   F  H     I H AAL      V      P  ++  N++ L ++++ 
Sbjct: 62  TDVSD-ERALARIFDAHPITAAI-HFAALKAVGESVA----KPIEYYRNNLDSLLSLLRV 115

Query: 101 AKETKTVEKIIYTSS 115
            +E   V++I+++SS
Sbjct: 116 MRERA-VKRIVFSSS 129

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 Length = 292

 Score = 52.9 bits (128), Expect = 4e-08
 Identities = 26/119 (21%), Positives = 43/119 (36%), Gaps = 24/119 (20%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKIL++GA+G LG  +   L  +   V     +  DI+             +V       
Sbjct: 13  MKILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDIT-------------NVLAVNKFF 59

Query: 61  DACFGCHVIFHTAA-----LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
           +     +V+ + AA       E         + +N  G KN+  AA       +I+  S
Sbjct: 60  NE-KKPNVVINCAAHTAVDKCE---EQYDLAYKINAIGPKNLAAAAYSVGA--EIVQIS 112

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397

 Score = 53.4 bits (129), Expect = 4e-08
 Identities = 39/149 (26%), Positives = 59/149 (39%), Gaps = 41/149 (27%)

Query: 1   MKILVSGASGYLGGRLCHALLKQ-GHSV-------------------RALVRRTSDISGL 40
           M++LV G +GY+G     ALL+   HSV                     + R+     G 
Sbjct: 3   MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGP 62

Query: 41  PSEGA---LELVYGDVTDYRSLVDACFGCH-----VIFHTAAL------VEPWLPDPSRF 86
               A     L  GDV +    ++  F  H     V+ H  A       V     DP ++
Sbjct: 63  KPPWADRYAALEVGDVRN-EDFLNGVFTRHGPIDAVV-HMCAFLAVGESVR----DPLKY 116

Query: 87  FAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
           +  NV G+  ++QA    K  +KII++SS
Sbjct: 117 YDNNVVGILRLLQAMLLHK-CDKIIFSSS 144

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} Length = 273

 Score = 52.2 bits (126), Expect = 6e-08
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 22/121 (18%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           M+ L++GASG LG  L   LL + H V  +   +        +G  +L   D+TD+  L 
Sbjct: 1   MRTLITGASGQLGIELSR-LLSERHEVIKVYNSS------EIQGGYKL---DLTDFPRLE 50

Query: 61  DAC--FGCHVIFHTAAL--V---EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYT 113
           D        VI + AA+  V   E    +  + + +N E ++++V+A K   +   I++ 
Sbjct: 51  DFIIKKRPDVIINAAAMTDVDKCE---IEKEKAYKINAEAVRHIVRAGKVIDS--YIVHI 105

Query: 114 S 114
           S
Sbjct: 106 S 106

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} Length = 287

 Score = 52.1 bits (126), Expect = 7e-08
 Identities = 24/119 (20%), Positives = 51/119 (42%), Gaps = 24/119 (20%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
            +++++GA+G LG +L   L  + + +    ++  DI+             +++  + +V
Sbjct: 6   ERVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDIT-------------NISQVQQVV 52

Query: 61  DACFGCHVIFHTAA-----LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
                 H+I H AA       E    +    + +N  G +NV  A++      K++Y S
Sbjct: 53  QE-IRPHIIIHCAAYTKVDQAE---KERDLAYVINAIGARNVAVASQLVGA--KLVYIS 105

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* Length = 348

 Score = 50.6 bits (122), Expect = 3e-07
 Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 37/141 (26%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRAL----------------VRRTSDISGLPSEG 44
            K+LV+G +GY+G      LL+ G+    +                +RR  +++G     
Sbjct: 3   EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRS--- 59

Query: 45  ALELVYGDVTDYRSLVDACFGCH----VIFHTAAL------VEPWLPDPSRFFAVNVEGL 94
            +E    D+ D +  +   F  +    VI H A L      V+     P  ++ VN+ G 
Sbjct: 60  -VEFEEMDILD-QGALQRLFKKYSFMAVI-HFAGLKAVGESVQ----KPLDYYRVNLTGT 112

Query: 95  KNVVQAAKETKTVEKIIYTSS 115
             +++  K    V+ ++++SS
Sbjct: 113 IQLLEIMKAHG-VKNLVFSSS 132

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 47.7 bits (114), Expect = 1e-06
 Identities = 38/205 (18%), Positives = 71/205 (34%), Gaps = 45/205 (21%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVR--ALVRRTSDISGLPSEGA--LELVYGDVTDYRS 58
           ++V+GA+  +G  L   L+K  +     A  R     + L S     + ++   VT  +S
Sbjct: 6   VVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKS 65

Query: 59  LVDAC---------FGCHVIFHTAALVEPW----LPDPSRF---FAVNVEGLKNVVQA-- 100
           L              G  ++ + A ++  +     P+ +       VN   +  + Q   
Sbjct: 66  LDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLL 125

Query: 101 ------------AKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA- 147
                        + + +   +I  SS   LGS    I D N     ++    Y  SKA 
Sbjct: 126 PLLKNAASKESGDQLSVSRAAVITISS--GLGS----ITD-NTSGSAQFPVLAYRMSKAA 178

Query: 148 ---VADKIALQAASEGLPIVPVYPG 169
                  +A+    + + +V   PG
Sbjct: 179 INMFGRTLAVDLKDDNVLVVNFCPG 203

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} Length = 321

 Score = 47.2 bits (113), Expect = 3e-06
 Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 1  MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
          M+ L++G +G++G  L + L +Q   V    R             +E++  D+ D + + 
Sbjct: 13 MRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNE-----AKLPNVEMISLDIMDSQRVK 67

Query: 61 DACFGC--HVIFHTAA 74
                    IFH AA
Sbjct: 68 KVISDIKPDYIFHLAA 83

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* Length = 299

 Score = 46.0 bits (110), Expect = 7e-06
 Identities = 25/121 (20%), Positives = 48/121 (39%), Gaps = 25/121 (20%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           M IL+ G +G +G  L  +L   G+ + AL   + +              GD ++ + + 
Sbjct: 1   MNILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKEFC------------GDFSNPKGVA 47

Query: 61  DAC--FGCHVIFHTAA-----LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYT 113
           +        VI + AA       E    +P     +N   ++ + +AA ET     +++ 
Sbjct: 48  ETVRKLRPDVIVNAAAHTAVDKAE---SEPELAQLLNATSVEAIAKAANETGA--WVVHY 102

Query: 114 S 114
           S
Sbjct: 103 S 103

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* Length = 337

 Score = 45.6 bits (109), Expect = 1e-05
 Identities = 81/369 (21%), Positives = 125/369 (33%), Gaps = 103/369 (27%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRT-----------SDISGLPSEGALELV 49
           M++LV+G +G++G      LL   +                    ++++ + ++  L  V
Sbjct: 1   MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFV 60

Query: 50  YGDVTDYRSLVDACF-GCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKT 106
           +GD+ D   L+     G   I H AA   V+  +   S F   NV+G + ++Q A +   
Sbjct: 61  HGDIRD-AGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVD--- 116

Query: 107 VEKIIYTSSFFALGSTD---GYIADENQVHEEKYFCTQYE------RSKAVADKIALQAA 157
                         ST+   G I D     E     +  E       SKA +D +A  A 
Sbjct: 117 -----AGVGRVVHVSTNQVYGSI-DSGSWTES----SPLEPNSPYAASKAGSDLVAR-AY 165

Query: 158 SE--GLPIVPVYPGVI------YGPG----KLTTGNLVAKLMIERF--NGRLPGYIGYGN 203
               GL +       I      YGP     KL        L +      G LP Y G G 
Sbjct: 166 HRTYGLDV------RITRCCNNYGPYQHPEKLI------PLFVTNLLDGGTLPLY-GDGA 212

Query: 204 DRFSFCHVDDVVDGHIAAMEKGRSGERYLLTGEN-ASFMQIFDMAAVITGTSRPRFCIPL 262
           +   + H DD   G    +  GR+GE Y + G    +  ++  +     G          
Sbjct: 213 NVREWVHTDDHCRGIALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADW------- 265

Query: 263 WLIEAYGWILVFFSRITGKLPLISYPTVHV---LAHQWAYS--CVKAKTELGYNPR-SLK 316
                        S +             V     H   YS    K + ELGY P+ S  
Sbjct: 266 -------------SSVR-----------KVADRKGHDLRYSLDGGKIERELGYRPQVSFA 301

Query: 317 EGLQEVLPW 325
           +GL   + W
Sbjct: 302 DGLARTVRW 310

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 43.4 bits (103), Expect = 4e-05
 Identities = 26/117 (22%), Positives = 42/117 (35%), Gaps = 21/117 (17%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEG-----ALELVYGDVTDYR 57
            LV+GAS   G  +  A +  G +V    RRT  +  L +       A+ L   DVTD  
Sbjct: 8   WLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISL---DVTDGE 64

Query: 58  SLVDA------CFGC--HVI-----FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAA 101
            +          +G    ++         A  E    +    F ++V G   + +A 
Sbjct: 65  RIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRAL 121

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 39/193 (20%), Positives = 72/193 (37%), Gaps = 40/193 (20%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVR--ALVRRTSDISGLPSE--GALELVYGDVTDY-- 56
           ILV+G S  +G  +   L           + R  + +  L  +       V GD+T+   
Sbjct: 5   ILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSV 64

Query: 57  -RSLVDAC---FGC-HVIFHTAALVEPWLP----DPSRF---FAVNVEGLKNVVQAA--- 101
            + LV+A     G    +   A ++EP       D + +   + +N   + ++V  A   
Sbjct: 65  LKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPE 124

Query: 102 -KETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE- 159
            K+T     +++ SS         + A              Y  SKA  +  A+  A+E 
Sbjct: 125 LKKTNG--NVVFVSSDACNMYFSSWGA--------------YGSSKAALNHFAMTLANEE 168

Query: 160 -GLPIVPVYPGVI 171
             +  + V PG++
Sbjct: 169 RQVKAIAVAPGIV 181

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 335

 Score = 42.2 bits (100), Expect = 1e-04
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 6/66 (9%)

Query: 1  MKI-LVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-----ISGLPSEGALELVYGDVT 54
           +  LV+G +G  G  L   LL++G+ V  LV R S      +  L  EG ++   GD+ 
Sbjct: 14 TRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMA 73

Query: 55 DYRSLV 60
          D  S+ 
Sbjct: 74 DACSVQ 79

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* Length = 345

 Score = 41.4 bits (98), Expect = 2e-04
 Identities = 15/66 (22%), Positives = 34/66 (51%), Gaps = 6/66 (9%)

Query: 1  MKI-LVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-----ISGLPSEGALELVYGDVT 54
           K  L++G  G  G  L   LL++G+ V    RR+ +     +  L  E  +++++ D+ 
Sbjct: 3  GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLL 62

Query: 55 DYRSLV 60
          ++ +++
Sbjct: 63 EFSNII 68

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 39.9 bits (94), Expect = 4e-04
 Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 22/110 (20%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSL- 59
           MKIL+ GASG LG  +    L++   V    R + D++             D+T+  S+ 
Sbjct: 4   MKILLIGASGTLGSAVKER-LEKKAEVITAGRHSGDVT------------VDITNIDSIK 50

Query: 60  --------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAA 101
                   VDA          + L E      +   +  + G  N+V   
Sbjct: 51  KMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLG 100

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score = 40.3 bits (95), Expect = 4e-04
 Identities = 21/115 (18%), Positives = 34/115 (29%), Gaps = 17/115 (14%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDY---R 57
           I+V+GA   LG  L   L+++GH V  + RR   +         A+  +  D+  +    
Sbjct: 6   IIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVD 65

Query: 58  SLVDAC---FGCHV--------IFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAA 101
               A     G                 +         R    N+     V Q  
Sbjct: 66  VAFAAAVEWGG-LPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQT 119

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 40.0 bits (94), Expect = 6e-04
 Identities = 31/205 (15%), Positives = 63/205 (30%), Gaps = 41/205 (20%)

Query: 1   MK-ILVSGASGYLGGRLCHALLK---QGHSVRALVRRTSDISGL----PSEGALELVYGD 52
           M  IL++G +  LG  L  ALL        +    R       L     +   + ++  D
Sbjct: 21  MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEID 80

Query: 53  VTDYRSLVDAC---------FGCHVIFHTAALVEPWLP----DPSRF---FAVNVEG--- 93
           + ++ +               G +V+F+ A +                     N      
Sbjct: 81  LRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIM 140

Query: 94  -----LKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA- 147
                L  + +AAK  ++    +  ++   + S  G I          Y       SK+ 
Sbjct: 141 LAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRT-----SKSA 195

Query: 148 ---VADKIALQAASEGLPIVPVYPG 169
                  +++    + +  V ++PG
Sbjct: 196 LNAATKSLSVDLYPQRIMCVSLHPG 220

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score = 39.6 bits (93), Expect = 7e-04
 Identities = 31/207 (14%), Positives = 68/207 (32%), Gaps = 53/207 (25%)

Query: 3   ILVSGASGYLGGRLCHALLK---QGHSVRALVRRTSD--------ISGLPSEGALELVYG 51
            +++GAS   G  L   L +    G  +  +  R+          +     +  + L   
Sbjct: 9   CVLTGASRGFGRALAPQLARLLSPGSVM-LVSARSESMLRQLKEELGAQQPDLKVVLAAA 67

Query: 52  DVTDY---RSLVDAC--------FGCHVIFHTAALVEPWLPDP---------SRFFAVNV 91
           D+      + L+ A             ++ + AA +                + ++A+N+
Sbjct: 68  DLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNL 127

Query: 92  EGLKNVVQAA----KETKTVEK-IIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK 146
             +  +        +++  + K ++  SS  AL    G+           Y C      K
Sbjct: 128 TSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGL---------Y-CA----GK 173

Query: 147 AVADKIALQAASE--GLPIVPVYPGVI 171
           A  D +    A+E   + ++   PG +
Sbjct: 174 AARDMLYQVLAAEEPSVRVLSYAPGPL 200

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	334
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	100.0
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	100.0
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	100.0
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	100.0
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	100.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	100.0
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	100.0
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	100.0
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	100.0
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	100.0
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	100.0
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	100.0
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	100.0
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	100.0
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	100.0
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	100.0
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	100.0
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	100.0
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	100.0
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	100.0
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	100.0
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	100.0
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	100.0
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	100.0
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	100.0
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	100.0
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	100.0
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	100.0
4f6c_A	427	AUSA reductase domain protein; thioester reductase	100.0
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	100.0
4f6l_B	508	AUSA reductase domain protein; thioester reductase	100.0
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	100.0
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	100.0
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	100.0
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	100.0
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	100.0
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	100.0
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	100.0
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	100.0
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	100.0
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	100.0
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	100.0
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	100.0
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	100.0
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	100.0
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	100.0
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	100.0
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	100.0
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	100.0
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.97
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.97
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.97
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.97
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.97
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.97
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.97
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.96
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.96
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.95
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.95
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.94
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.94
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.94
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.94
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.94
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.94
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.93
1spx_A	278	Short-chain reductase family member (5L265); paral	99.93
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.93
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.93
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.92
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.92
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.92
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.92
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.92
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.92
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.92
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.92
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.92
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.92
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.92
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.91
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.91
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.91
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.91
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.91
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.91
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.91
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.91
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.91
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.91
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.91
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.91
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.91
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.91
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.91
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.91
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.9
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.9
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.9
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.9
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.9
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.9
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.9
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.9
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.9
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.9
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.9
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.9
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.9
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.9
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.9
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.9
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.9
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.9
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.9
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.9
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.9
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.9
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.9
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.9
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.9
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.9
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.9
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.9
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.9
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.9
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.9
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.89
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.89
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.89
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.89
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.89
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.89
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.89
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.89
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.89
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.89
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.89
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.89
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.89
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.89
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.89
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.89
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.89
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.89
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.89
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.89
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.89
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.89
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.89
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.89
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.89
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.89
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.89
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.89
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.89
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.89
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.89
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.89
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.88
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.88
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.88
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.88
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.88
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.88
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.88
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.88
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.88
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.88
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.88
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.88
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.88
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.88
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.88
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.88
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.88
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.88
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.88
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.88
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.88
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.88
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.88
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.88
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.88
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.88
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.88
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.88
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.88
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.87
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.87
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.87
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.87
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.87
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.87
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.87
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.87
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.87
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.87
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.87
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.87
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.87
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.87
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.87
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.87
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.87
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.87
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.87
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.87
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.87
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.87
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.87
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.87
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.86
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.86
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.86
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.86
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.86
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.86
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.86
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.86
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.86
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.86
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.86
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.86
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.86
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.86
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.86
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.86
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.86
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.86
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.86
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.85
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.85
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.85
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.85
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.85
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.85
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.84
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.84
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.84
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.84
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.84
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.84
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.84
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.83
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.83
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.83
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.83
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.83
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.82
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.82
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.82
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.82
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.82
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.81
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.8
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.8
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.8
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.8
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.8
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.8
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.79
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.79
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.79
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.79
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.77
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.77
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.76
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.75
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.71
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.66
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.65
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.64
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.63
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.54
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.49
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.48
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.47
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.45
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.44
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.42
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.36
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.29
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.28
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.22
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	99.17
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	99.15
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	99.05
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	99.05
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	98.96
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.86
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.8
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.79
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.75
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.74
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.74
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.73
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.63
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.61
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.6
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.57
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.53
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.52
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.45
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.43
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.39
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.37
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.27
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.19
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	98.08
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	98.04
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	98.03
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.97
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.94
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.93
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.92
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.92
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	97.87
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.86
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.83
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.74
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.73
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.73
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.73
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	97.71
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.71
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.67
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.63
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.6
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.59
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	97.57
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.57
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	97.57
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	97.55
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	97.52
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.49
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.49
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	97.47
1lnq_A	336	MTHK channels, potassium channel related protein;	97.46
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	97.42
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.42
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.4
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	97.4
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.4
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	97.38
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	97.37
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	97.32
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.32
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.31
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	97.31
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.3
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.29
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.28
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.25
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	97.25
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.22
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.21
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	97.21
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	97.21
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.21
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.2
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.15
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	97.14
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.13
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	97.13
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.1
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	97.1
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	97.09
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.08
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.06
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.04
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.03
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	97.03
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	97.02
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	97.01
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	96.97
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	96.95
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.93
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	96.93
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	96.89
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	96.89
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	96.87
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	96.86
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.85
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	96.84
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	96.83
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	96.82
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	96.8
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.8
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	96.79
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	96.78
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.77
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.77
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	96.76
3gms_A	340	Putative NADPH:quinone reductase; structural genom	96.76
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	96.74
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	96.73
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.72
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	96.7
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.66
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	96.61
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	96.6
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	96.58
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	96.58
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	96.57
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	96.57
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	96.56
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.56
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	96.55
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	96.55
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	96.53
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	96.52
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	96.52
1dlj_A	402	UDP-glucose dehydrogenase; rossmann fold, ternary	96.52
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	96.51
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	96.5
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	96.5
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	96.49
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.49
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	96.48
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	96.48
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.47
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	96.47
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.46
4ffl_A	363	PYLC; amino acid, biosynthesis of pyrrolysine, iso	96.46
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.45
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	96.45
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	96.45
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	96.43
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.42
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	96.42
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	96.4
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	96.38
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	96.37
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	96.36
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.36
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	96.33
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	96.32
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	96.31
3vtf_A	444	UDP-glucose 6-dehydrogenase; two discrete alpha/be	96.3
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.3
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	96.3
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	96.29
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.29
1txg_A	335	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid	96.26
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.26
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.25
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	96.24
3hg7_A	324	D-isomer specific 2-hydroxyacid dehydrogenase FAM	96.24
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.23
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.23
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	96.22
2q3e_A	467	UDP-glucose 6-dehydrogenase; hexamer, structural g	96.21
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	96.21
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.2
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.17
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	96.17
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	96.15
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	96.14
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	96.14
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	96.14
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.13
2o3j_A	481	UDP-glucose 6-dehydrogenase; structural genomics,	96.13
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.12
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.12
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.11
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	96.11
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	96.09
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.08
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.06

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=5.3e-50  Score=358.19  Aligned_cols=323  Identities=24%  Similarity=0.331  Sum_probs=246.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~   80 (334)
                      |+|||||||||||++|++.|+++|++|++++|++.+...+.. .+++++.+|++|.+.+.++++++|+|||+|+....+.
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~   92 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAY-LEPECRVAEMLDHAGLERALRGLDGVIFSAGYYPSRP   92 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGG-GCCEEEECCTTCHHHHHHHTTTCSEEEEC--------
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhcc-CCeEEEEecCCCHHHHHHHHcCCCEEEECCccCcCCC
Confidence            789999999999999999999999999999998765443322 2689999999999999999999999999999765555


Q ss_pred             CCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCC--ccCCCCCccccc-cccChHHHHHHHHHHHHHHHh
Q 019878           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG--YIADENQVHEEK-YFCTQYERSKAVADKIALQAA  157 (334)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~--~~~~e~~~~~~~-~~~~~Y~~sK~~~E~~~~~~~  157 (334)
                      .++..++++|+.++.+++++|.+. ++++||++||.++|+....  .+ +|+++..+. ...+.|+.+|.++|.+++.+.
T Consensus        93 ~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~~~~-~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~  170 (342)
T 2x4g_A           93 RRWQEEVASALGQTNPFYAACLQA-RVPRILYVGSAYAMPRHPQGLPG-HEGLFYDSLPSGKSSYVLCKWALDEQAREQA  170 (342)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHH-TCSCEEEECCGGGSCCCTTSSCB-CTTCCCSSCCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEECCHHhhCcCCCCCCC-CCCCCCCccccccChHHHHHHHHHHHHHHHh
Confidence            677889999999999999999998 6899999999999987654  34 555443320 014789999999999999976


Q ss_pred             hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCCCCeEEecC-C
Q 019878          158 SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTG-E  236 (334)
Q Consensus       158 ~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g~~~~i~g-~  236 (334)
                      +.|++++++||+.+||++.... + +..++.....+..+.+   +++.++|+|++|+|++++.+++++..|++||+++ +
T Consensus       171 ~~g~~~~ilrp~~v~g~~~~~~-~-~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~~~~~~~g~~~~v~~~~  245 (342)
T 2x4g_A          171 RNGLPVVIGIPGMVLGELDIGP-T-TGRVITAIGNGEMTHY---VAGQRNVIDAAEAGRGLLMALERGRIGERYLLTGHN  245 (342)
T ss_dssp             HTTCCEEEEEECEEECSCCSSC-S-TTHHHHHHHTTCCCEE---ECCEEEEEEHHHHHHHHHHHHHHSCTTCEEEECCEE
T ss_pred             hcCCcEEEEeCCceECCCCccc-c-HHHHHHHHHcCCCccc---cCCCcceeeHHHHHHHHHHHHhCCCCCceEEEcCCc
Confidence            4499999999999999976211 2 3445555556655543   5688999999999999999998876688999975 6


Q ss_pred             CCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhcCC-CCCCH
Q 019878          237 NASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGY-NPRSL  315 (334)
Q Consensus       237 ~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~-~p~~~  315 (334)
                       +|+.|+++.+.+.+|.+.+. .+|.+.....+.+.+++....+..+.+.+...........+|++|++++||| +|.++
T Consensus       246 -~s~~e~~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~~p~~~  323 (342)
T 2x4g_A          246 -LEMADLTRRIAELLGQPAPQ-PMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREELGFFSTTAL  323 (342)
T ss_dssp             -EEHHHHHHHHHHHHTCCCCE-EECHHHHHHHHHHHHC----------------CCTTCCCCBCCHHHHHHHCCCCCSCH
T ss_pred             -ccHHHHHHHHHHHhCCCCCC-cCCHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHhcCcccChHHHHHhCCCCCCCCH
Confidence             99999999999999998888 8898887776665554443333223232222222245667899999999999 99999


Q ss_pred             HHHHHHHHHHHHhcCCCC
Q 019878          316 KEGLQEVLPWLRSSGMIK  333 (334)
Q Consensus       316 ~e~i~~~~~~~~~~~~~~  333 (334)
                      +++++++++|++++++++
T Consensus       324 ~~~l~~~~~~~~~~g~~~  341 (342)
T 2x4g_A          324 DDTLLRAIDWFRDNGYFN  341 (342)
T ss_dssp             HHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHHHHHHcCCCC
Confidence            999999999999999876

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=2.1e-49  Score=349.84  Aligned_cols=294  Identities=17%  Similarity=0.221  Sum_probs=248.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~   80 (334)
                      |+|||||||||||++|++.|+++|++|++++|++.... +.   +++++.+|++ .+.+.++++++|+|||+|+..... 
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~---~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~~~~-   76 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN---DYEYRVSDYT-LEDLINQLNDVDAVVHLAATRGSQ-   76 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------CCEEEECCCC-HHHHHHHTTTCSEEEECCCCCCSS-
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC---ceEEEEcccc-HHHHHHhhcCCCEEEEccccCCCC-
Confidence            58999999999999999999999999999999944333 32   7999999999 999999999999999999986543 


Q ss_pred             CCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHhh-c
Q 019878           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS-E  159 (334)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~  159 (334)
                       ++...+++|+.++.+++++|++. +++||||+||.++|+.....+.+|+.+..+   .+.|+.+|.++|++++.+.+ .
T Consensus        77 -~~~~~~~~n~~~~~~ll~a~~~~-~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p---~~~Y~~sK~~~E~~~~~~~~~~  151 (311)
T 3m2p_A           77 -GKISEFHDNEILTQNLYDACYEN-NISNIVYASTISAYSDETSLPWNEKELPLP---DLMYGVSKLACEHIGNIYSRKK  151 (311)
T ss_dssp             -SCGGGTHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGCCCGGGCSBCTTSCCCC---SSHHHHHHHHHHHHHHHHHHHS
T ss_pred             -ChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEccHHHhCCCCCCCCCCCCCCCC---CchhHHHHHHHHHHHHHHHHHc
Confidence             77889999999999999999998 789999999999999877667777765444   58999999999999999875 7


Q ss_pred             CCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCCCCeEEec-CCCC
Q 019878          160 GLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLT-GENA  238 (334)
Q Consensus       160 g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g~~~~i~-g~~~  238 (334)
                      |++++++||+++||++.... +++..++.....+..+.+++++++.++|+|++|+|+++..+++++..+++||++ ++.+
T Consensus       152 g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~i~~~~~~  230 (311)
T 3m2p_A          152 GLCIKNLRFAHLYGFNEKNN-YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVSGTFNIGSGDAL  230 (311)
T ss_dssp             CCEEEEEEECEEECSCC--C-CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTTCCEEEEECCSCEE
T ss_pred             CCCEEEEeeCceeCcCCCCC-CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCCCCCeEEeCCCCcc
Confidence            99999999999999986532 567777877888888888899999999999999999999999987788999996 6789


Q ss_pred             CHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhcCCCCC-CHHH
Q 019878          239 SFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKE  317 (334)
Q Consensus       239 s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~-~~~e  317 (334)
                      |+.|+++.+.+.+|.+.+....|.+                  .        ........+|++|++++|||+|+ ++++
T Consensus       231 s~~e~~~~i~~~~g~~~~~~~~~~~------------------~--------~~~~~~~~~d~~k~~~~lG~~p~~~~~~  284 (311)
T 3m2p_A          231 TNYEVANTINNAFGNKDNLLVKNPN------------------A--------NEGIHSSYMDSSKAKELLDFSTDYNFAT  284 (311)
T ss_dssp             CHHHHHHHHHHHTTCTTCEEECSSS------------------B--------CCSCCCBCBCCHHHHHHSCCCCSCCHHH
T ss_pred             cHHHHHHHHHHHhCCCCcceecCCC------------------C--------CCCcCceecCHHHHHHHhCCCcccCHHH
Confidence            9999999999999988766543310                  0        01124456899999999999999 9999


Q ss_pred             HHHHHHHHHHhcCCC
Q 019878          318 GLQEVLPWLRSSGMI  332 (334)
Q Consensus       318 ~i~~~~~~~~~~~~~  332 (334)
                      +|+++++|+++++.+
T Consensus       285 ~l~~~~~~~~~~~~~  299 (311)
T 3m2p_A          285 AVEEIHLLMRGLDDV  299 (311)
T ss_dssp             HHHHHHHHHCC----
T ss_pred             HHHHHHHHHHhcccC
Confidence            999999999887654

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=7.9e-49  Score=351.87  Aligned_cols=303  Identities=20%  Similarity=0.260  Sum_probs=248.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC-C---CCC------CCeEEEEcCCCChhhHHHHhcCCCEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-L---PSE------GALELVYGDVTDYRSLVDACFGCHVIF   70 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~---~~~------~~v~~~~~Dl~d~~~~~~~~~~~d~vi   70 (334)
                      |+|||||||||||++|++.|+++|++|++++|+...... +   ...      ++++++.+|++|.+.+.++++++|+||
T Consensus        26 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi  105 (351)
T 3ruf_A           26 KTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDHVL  105 (351)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCSEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCCEEE
Confidence            689999999999999999999999999999998654221 0   000      379999999999999999999999999


Q ss_pred             EeccccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHH
Q 019878           71 HTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAV  148 (334)
Q Consensus        71 h~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~  148 (334)
                      |+|+....  +..++...+++|+.++.+++++|++. ++++|||+||.++|+.....+.+|+.+..+   .+.|+.+|.+
T Consensus       106 h~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p---~~~Y~~sK~~  181 (351)
T 3ruf_A          106 HQAALGSVPRSIVDPITTNATNITGFLNILHAAKNA-QVQSFTYAASSSTYGDHPALPKVEENIGNP---LSPYAVTKYV  181 (351)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGGTTCCCSSBCTTCCCCC---CSHHHHHHHH
T ss_pred             ECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEecHHhcCCCCCCCCccCCCCCC---CChhHHHHHH
Confidence            99997432  33456778899999999999999998 689999999999999887777777776544   5899999999


Q ss_pred             HHHHHHHHhh-cCCCEEEEecCceecCCCCCc---hhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhc
Q 019878          149 ADKIALQAAS-EGLPIVPVYPGVIYGPGKLTT---GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEK  224 (334)
Q Consensus       149 ~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~  224 (334)
                      +|++++.+.+ .|++++++||+++|||+....   ..++..++.....+..+.+++++++.++|+|++|+|++++.++.+
T Consensus       182 ~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~  261 (351)
T 3ruf_A          182 NEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALA  261 (351)
T ss_dssp             HHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhh
Confidence            9999999875 599999999999999986432   246677788888888888889999999999999999999999987


Q ss_pred             --CCCCCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceech
Q 019878          225 --GRSGERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSC  301 (334)
Q Consensus       225 --~~~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  301 (334)
                        ...+++||++ ++.+|+.|+++.+.+.+|.+......+..              .....+        .......+|+
T Consensus       262 ~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~--------------~~~~~~--------~~~~~~~~d~  319 (351)
T 3ruf_A          262 KDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIK--------------YREFRS--------GDVRHSQADV  319 (351)
T ss_dssp             CGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC-----E--------------EECCCT--------TCCSBCCBCC
T ss_pred             ccccCCCEEEeCCCCcccHHHHHHHHHHHhCccccccccccc--------------ccCCCC--------CccceeeeCH
Confidence              3468999996 68899999999999999985443221100              000000        0123456899


Q ss_pred             HHHHHhcCCCCC-CHHHHHHHHHHHHHhc
Q 019878          302 VKAKTELGYNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       302 ~k~~~~lG~~p~-~~~e~i~~~~~~~~~~  329 (334)
                      +|++++|||+|+ +++++|+++++||+++
T Consensus       320 ~k~~~~lG~~p~~~~~~~l~~~~~~~~~~  348 (351)
T 3ruf_A          320 TKAIDLLKYRPNIKIREGLRLSMPWYVRF  348 (351)
T ss_dssp             HHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence            999999999999 9999999999999874

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=3.1e-49  Score=357.26  Aligned_cols=314  Identities=18%  Similarity=0.254  Sum_probs=251.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC-CCeEEEEEcCCCCCCCCCCCCCeEEEEcCCC-ChhhHHHHhcCCCEEEEeccccCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVT-DYRSLVDACFGCHVIFHTAALVEP   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~-d~~~~~~~~~~~d~vih~a~~~~~   78 (334)
                      |+|||||||||||++|++.|+++ |++|++++|+..+...+...++++++.+|++ |.+.+.++++++|+|||+|+....
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~~~~~  104 (372)
T 3slg_A           25 KKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLVAIATP  104 (372)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECBCCCCH
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcCccccH
Confidence            57999999999999999999998 9999999999876655444458999999999 999999999999999999997543


Q ss_pred             --CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCcc----ccccccChHHHHHHHHHHH
Q 019878           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVH----EEKYFCTQYERSKAVADKI  152 (334)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~----~~~~~~~~Y~~sK~~~E~~  152 (334)
                        +..++...+++|+.++.+++++|++. + ++|||+||.++||.....+..|++..    +...+.+.|+.+|.++|++
T Consensus       105 ~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~  182 (372)
T 3slg_A          105 ATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDRV  182 (372)
T ss_dssp             HHHHHCHHHHHHHHTTTTHHHHHHHHHH-T-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHH
T ss_pred             HHHhhCHHHHHHHHHHHHHHHHHHHHHh-C-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHHHHHHHH
Confidence              23466778899999999999999998 5 89999999999998776566555533    1113456899999999999


Q ss_pred             HHHHhhcCCCEEEEecCceecCCCCC-------chhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcC
Q 019878          153 ALQAASEGLPIVPVYPGVIYGPGKLT-------TGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG  225 (334)
Q Consensus       153 ~~~~~~~g~~~~ilR~~~v~G~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~  225 (334)
                      ++.+.+.|++++++||+++|||+...       ..+++..++.....+....+++++++.++|+|++|+|++++.+++++
T Consensus       183 ~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~  262 (372)
T 3slg_A          183 IWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKIIENS  262 (372)
T ss_dssp             HHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCG
T ss_pred             HHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhcc
Confidence            99987559999999999999998642       24577778888888888888888999999999999999999999986


Q ss_pred             ---CCCCeEEecC--CCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCC-CCCHHHHHHhhcccee
Q 019878          226 ---RSGERYLLTG--ENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLP-LISYPTVHVLAHQWAY  299 (334)
Q Consensus       226 ---~~g~~~~i~g--~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  299 (334)
                         ..+++||+++  +.+|+.|+++.+.+.+|.+.+....|....            +..... .... ..........+
T Consensus       263 ~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~------------~~~~~~~~~~~-~~~~~~~~~~~  329 (372)
T 3slg_A          263 NGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVK------------LVETTSGAYYG-NGYQDVQNRVP  329 (372)
T ss_dssp             GGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTHHHHHTCC------------EEEC--------------CCCCB
T ss_pred             cCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcccccccccce------------eeecccccccc-CCccccceeec
Confidence               3689999975  579999999999999998766543321000            000000 0000 00012344567


Q ss_pred             chHHHHHhcCCCCC-CHHHHHHHHHHHHHhc
Q 019878          300 SCVKAKTELGYNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       300 d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~  329 (334)
                      |++|++++|||+|+ +++++|+++++||+++
T Consensus       330 d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  360 (372)
T 3slg_A          330 KIENTMQELGWAPQFTFDDALRQIFEAYRGH  360 (372)
T ss_dssp             CCHHHHHHHTCCCCCCHHHHHHHHHHHHTTC
T ss_pred             CHHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence            99999999999999 9999999999999764

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=3.4e-48  Score=347.10  Aligned_cols=298  Identities=22%  Similarity=0.317  Sum_probs=243.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCC-----CCCCCCCCeEEEEcCCCChhhHHHHhcC--CCEEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDI-----SGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFH   71 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~-----~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vih   71 (334)
                      |+|||||||||||++|++.|+++|  ++|++++|.....     ..+...++++++.+|++|.+.+.+++++  +|+|||
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih  104 (346)
T 4egb_A           25 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQVIVN  104 (346)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCEEEE
T ss_pred             CeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCEEEE
Confidence            579999999999999999999999  7777777764221     1122224899999999999999999987  999999


Q ss_pred             eccccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCC-CccCCCCCccccccccChHHHHHHH
Q 019878           72 TAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD-GYIADENQVHEEKYFCTQYERSKAV  148 (334)
Q Consensus        72 ~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~-~~~~~e~~~~~~~~~~~~Y~~sK~~  148 (334)
                      +|+....  +..++...+++|+.++.+++++|++. ++++||++||.++|+... ..+.+|+.+..+   .+.|+.+|.+
T Consensus       105 ~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p---~~~Y~~sK~~  180 (346)
T 4egb_A          105 FAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKY-PHIKLVQVSTDEVYGSLGKTGRFTEETPLAP---NSPYSSSKAS  180 (346)
T ss_dssp             CCCCC---------CHHHHHHTHHHHHHHHHHHHS-TTSEEEEEEEGGGGCCCCSSCCBCTTSCCCC---CSHHHHHHHH
T ss_pred             CCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEeCchHHhCCCCcCCCcCCCCCCCC---CChhHHHHHH
Confidence            9997543  44567789999999999999999998 789999999999999763 456666665544   5899999999


Q ss_pred             HHHHHHHHhh-cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCC
Q 019878          149 ADKIALQAAS-EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRS  227 (334)
Q Consensus       149 ~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~  227 (334)
                      +|++++.+.+ .|++++++||+++|||+... ..++..++.....+....+++++++.++|+|++|+|+++..+++++..
T Consensus       181 ~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~  259 (346)
T 4egb_A          181 ADMIALAYYKTYQLPVIVTRCSNNYGPYQYP-EKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGRV  259 (346)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEECEEESTTCCT-TSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCCT
T ss_pred             HHHHHHHHHHHhCCCEEEEeecceeCcCCCc-cchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCCC
Confidence            9999999875 59999999999999998653 356777788888888888889999999999999999999999998888


Q ss_pred             CCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHH
Q 019878          228 GERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKT  306 (334)
Q Consensus       228 g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~  306 (334)
                      |++||++ ++.+|+.|+++.+.+.+|.+.+.....                  ...+        .....+.+|++|+++
T Consensus       260 g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~------------------~~~~--------~~~~~~~~d~~k~~~  313 (346)
T 4egb_A          260 GEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYV------------------TDRL--------GHDRRYAINAEKMKN  313 (346)
T ss_dssp             TCEEEECCSCCEEHHHHHHHHHHHHTCCGGGCEEE------------------CC----------CCCSCCCBCCHHHHH
T ss_pred             CCEEEECCCCceeHHHHHHHHHHHhCCCccccccc------------------CCCC--------CCcceeeccHHHHHH
Confidence            9999997 577999999999999999876532210                  0000        012344689999999


Q ss_pred             hcCCCCC-CHHHHHHHHHHHHHhc
Q 019878          307 ELGYNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       307 ~lG~~p~-~~~e~i~~~~~~~~~~  329 (334)
                      +|||+|+ +++++|+++++||+++
T Consensus       314 ~lG~~p~~~~~e~l~~~~~~~~~~  337 (346)
T 4egb_A          314 EFDWEPKYTFEQGLQETVQWYEKN  337 (346)
T ss_dssp             HHCCCCCCCHHHHHHHHHHHHHHC
T ss_pred             HcCCCCCCCHHHHHHHHHHHHHhh
Confidence            9999999 9999999999999875

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=1.3e-48  Score=344.88  Aligned_cols=301  Identities=22%  Similarity=0.252  Sum_probs=242.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccC--C
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVE--P   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~--~   78 (334)
                      |||||||||||||++|++.|+++|++|++++|+........ ..+++++.+|+.|.+ +.+++++ |+|||+|+...  .
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~~~~~~~   77 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-NPSAELHVRDLKDYS-WGAGIKG-DVVFHFAANPEVRL   77 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS-CTTSEEECCCTTSTT-TTTTCCC-SEEEECCSSCSSSG
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc-CCCceEEECccccHH-HHhhcCC-CEEEECCCCCCchh
Confidence            89999999999999999999999999999999876543322 237899999999998 8888887 99999999643  2


Q ss_pred             CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHhh
Q 019878           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS  158 (334)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~  158 (334)
                      +..++...+++|+.++.+++++|++. ++++|||+||.++|+.....+.+|+.+..+   .+.|+.+|.++|.+++.+.+
T Consensus        78 ~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p---~~~Y~~sK~~~e~~~~~~~~  153 (312)
T 3ko8_A           78 STTEPIVHFNENVVATFNVLEWARQT-GVRTVVFASSSTVYGDADVIPTPEEEPYKP---ISVYGAAKAAGEVMCATYAR  153 (312)
T ss_dssp             GGSCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSCSSSSBCTTSCCCC---CSHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeCcHHHhCCCCCCCCCCCCCCCC---CChHHHHHHHHHHHHHHHHH
Confidence            44567788899999999999999998 689999999999999887777777765544   58999999999999999875


Q ss_pred             -cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcC-CCCccccCCCCceeeeeHHHHHHHHHHHhhc----CCCCCeEE
Q 019878          159 -EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNG-RLPGYIGYGNDRFSFCHVDDVVDGHIAAMEK----GRSGERYL  232 (334)
Q Consensus       159 -~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~----~~~g~~~~  232 (334)
                       .|++++++||+++|||+..  .+.+..++.+...+ ....+++++++.++|+|++|+|++++.++++    ...+++||
T Consensus       154 ~~g~~~~~lrp~~v~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~n  231 (312)
T 3ko8_A          154 LFGVRCLAVRYANVVGPRLR--HGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLALN  231 (312)
T ss_dssp             HHCCEEEEEEECEEECTTCC--SSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSEEEEE
T ss_pred             HhCCCEEEEeeccccCcCCC--CChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCCcEEE
Confidence             5999999999999999864  34566667666666 3445678889999999999999999999987    34688999


Q ss_pred             ec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhcCCC
Q 019878          233 LT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYN  311 (334)
Q Consensus       233 i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~  311 (334)
                      ++ ++.+|+.|+++.+.+.+|.+++....|......            .         .........+|++|++++|||+
T Consensus       232 i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~------------~---------~~~~~~~~~~d~~k~~~~lG~~  290 (312)
T 3ko8_A          232 VGNVDAVRVLDIAQIVAEVLGLRPEIRLVPSTPDGR------------G---------WPGDVKYMTLAVTKLMKLTGWR  290 (312)
T ss_dssp             ESCSSCEEHHHHHHHHHHHHTCCCEEEEC-------------------------------CCCSEECBCCHHHHHHHCCC
T ss_pred             EcCCCceeHHHHHHHHHHHhCCCCceeecCcccccc------------C---------CCCCccccccCHHHHHHHhCCC
Confidence            97 578999999999999999887665544321000            0         0001123468999999999999


Q ss_pred             CC-CHHHHHHHHHHHHHhcCC
Q 019878          312 PR-SLKEGLQEVLPWLRSSGM  331 (334)
Q Consensus       312 p~-~~~e~i~~~~~~~~~~~~  331 (334)
                      |+ +++++|+++++|++++++
T Consensus       291 p~~~~~~~l~~~~~~~~~~~~  311 (312)
T 3ko8_A          291 PTMTSAEAVKKTAEDLAKELW  311 (312)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHC
T ss_pred             CCCCHHHHHHHHHHHHHhhhc
Confidence            99 999999999999998753

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=5e-48  Score=346.14  Aligned_cols=289  Identities=24%  Similarity=0.300  Sum_probs=246.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~   80 (334)
                      |+|||||||||||++|++.|+++|++|++++|++..       .+++++.+|+.|.+.+.++++++|+|||+|+......
T Consensus        20 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~   92 (347)
T 4id9_A           20 HMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------TGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFMSWAP   92 (347)
T ss_dssp             -CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------SCCSEEESCTTCHHHHHHHHTTCSEEEECCCCCCSSG
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------CCccEEecCcCCHHHHHHHHhCCCEEEECCcccCcch
Confidence            689999999999999999999999999999998765       2688999999999999999999999999999866544


Q ss_pred             CCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceecc--CCCccCCCCCccccccccChHHHHHHHHHHHHHHHhh
Q 019878           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS--TDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS  158 (334)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~--~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~  158 (334)
                      .+....+++|+.++.+++++|++. ++++||++||.++||.  ....+..|+.+..+   .+.|+.+|.++|++++.+.+
T Consensus        93 ~~~~~~~~~nv~~~~~ll~a~~~~-~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~---~~~Y~~sK~~~E~~~~~~~~  168 (347)
T 4id9_A           93 ADRDRMFAVNVEGTRRLLDAASAA-GVRRFVFASSGEVYPENRPEFLPVTEDHPLCP---NSPYGLTKLLGEELVRFHQR  168 (347)
T ss_dssp             GGHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCC---CSHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEECCHHHhCCCCCCCCCcCCCCCCCC---CChHHHHHHHHHHHHHHHHH
Confidence            455788999999999999999997 7899999999999998  45556667665444   58999999999999999875


Q ss_pred             -cCCCEEEEecCcee-------------cCCCCCc----------hhHHHHHHHHHHcCCCCccccCCCCceee----ee
Q 019878          159 -EGLPIVPVYPGVIY-------------GPGKLTT----------GNLVAKLMIERFNGRLPGYIGYGNDRFSF----CH  210 (334)
Q Consensus       159 -~g~~~~ilR~~~v~-------------G~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~  210 (334)
                       .|++++++||+++|             ||+....          .+++..++.....+....+++++++.++|    +|
T Consensus       169 ~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~  248 (347)
T 4id9_A          169 SGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRMHITD  248 (347)
T ss_dssp             HSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEECEEE
T ss_pred             hcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCccCcEe
Confidence             68999999999999             8764321          35566677777788877888899999999    99


Q ss_pred             HHHHHHHHHHHhhcC-CCCCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHH
Q 019878          211 VDDVVDGHIAAMEKG-RSGERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYP  288 (334)
Q Consensus       211 v~D~a~a~~~~~~~~-~~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (334)
                      ++|+|++++.++.++ ..+++||++ ++.+|+.|+++.+.+.+|.+.+....|.                   .+     
T Consensus       249 v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~-------------------~~-----  304 (347)
T 4id9_A          249 TRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPIVTVDFPG-------------------DG-----  304 (347)
T ss_dssp             HHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCEEEEECSS-------------------CC-----
T ss_pred             HHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCCceeeCCC-------------------cc-----
Confidence            999999999999987 568999996 5789999999999999998766544331                   00     


Q ss_pred             HHHHhhccceechHHHHHhcCCCCC-CHHHHHHHHHHHHHhcC
Q 019878          289 TVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSSG  330 (334)
Q Consensus       289 ~~~~~~~~~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~~  330 (334)
                            ....+|++|++++|||+|+ +++++|+++++|++++.
T Consensus       305 ------~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~  341 (347)
T 4id9_A          305 ------VYYHTSNERIRNTLGFEAEWTMDRMLEEAATARRQRL  341 (347)
T ss_dssp             ------CBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC
T ss_pred             ------cccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhh
Confidence                  1456899999999999999 99999999999998753

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=1e-47  Score=346.05  Aligned_cols=294  Identities=20%  Similarity=0.277  Sum_probs=244.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHh--CCCeEEEEEcCCCC-------CCCCC-----CCCCeEEEEcCCCChhhHHHH-hcC
Q 019878            1 MKILVSGASGYLGGRLCHALLK--QGHSVRALVRRTSD-------ISGLP-----SEGALELVYGDVTDYRSLVDA-CFG   65 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~--~g~~V~~~~r~~~~-------~~~~~-----~~~~v~~~~~Dl~d~~~~~~~-~~~   65 (334)
                      |+|||||||||||++|++.|++  +|++|++++|+...       ...+.     ...+++++.+|++|.+.+.++ ..+
T Consensus        11 ~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   90 (362)
T 3sxp_A           11 QTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEKLH   90 (362)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTTSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhccC
Confidence            5799999999999999999999  99999999997651       11110     113679999999999999998 788


Q ss_pred             CCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHH
Q 019878           66 CHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (334)
Q Consensus        66 ~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (334)
                      +|+|||+||....+..++...+++|+.++.+++++|++. +++ ||++||.++||.... +.+|+.+..|   .++|+.+
T Consensus        91 ~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~~~-~V~~SS~~vyg~~~~-~~~E~~~~~p---~~~Y~~s  164 (362)
T 3sxp_A           91 FDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSK-KAK-VIYASSAGVYGNTKA-PNVVGKNESP---ENVYGFS  164 (362)
T ss_dssp             CSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHT-TCE-EEEEEEGGGGCSCCS-SBCTTSCCCC---SSHHHHH
T ss_pred             CCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHc-CCc-EEEeCcHHHhCCCCC-CCCCCCCCCC---CChhHHH
Confidence            999999999866666788889999999999999999998 565 999999999998776 6666664443   5899999


Q ss_pred             HHHHHHHHHHHhhcCCCEEEEecCceecCCCCCch---hHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHh
Q 019878          146 KAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTG---NLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAM  222 (334)
Q Consensus       146 K~~~E~~~~~~~~~g~~~~ilR~~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~  222 (334)
                      |.++|.+++.+... ++++++||+++|||+.....   +++..++.....+..+.+++++++.++|+|++|+|++++.++
T Consensus       165 K~~~E~~~~~~~~~-~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~  243 (362)
T 3sxp_A          165 KLCMDEFVLSHSND-NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAM  243 (362)
T ss_dssp             HHHHHHHHHHTTTT-SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhcc-CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHH
Confidence            99999999997755 99999999999999864321   567777777888888878888999999999999999999999


Q ss_pred             hcCCCCCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceech
Q 019878          223 EKGRSGERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSC  301 (334)
Q Consensus       223 ~~~~~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  301 (334)
                      +++..| +||++ |+.+|+.|+++.+.+.+| +.+....|.+.                          ........+|+
T Consensus       244 ~~~~~g-~~~i~~~~~~s~~e~~~~i~~~~g-~~~~~~~~~~~--------------------------~~~~~~~~~d~  295 (362)
T 3sxp_A          244 KAQKSG-VYNVGYSQARSYNEIVSILKEHLG-DFKVTYIKNPY--------------------------AFFQKHTQAHI  295 (362)
T ss_dssp             TCSSCE-EEEESCSCEEEHHHHHHHHHHHHC-CCEEECCC---------------------------------CCCCBCC
T ss_pred             hcCCCC-EEEeCCCCCccHHHHHHHHHHHcC-CCceEECCCCC--------------------------cCcccceecCH
Confidence            987777 99996 678999999999999999 66555444320                          11234556899


Q ss_pred             HHHHHhcCCCCC-CHHHHHHHHHHHHHhc
Q 019878          302 VKAKTELGYNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       302 ~k~~~~lG~~p~-~~~e~i~~~~~~~~~~  329 (334)
                      +|+++.|||+|+ +++++|+++++|+++.
T Consensus       296 ~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  324 (362)
T 3sxp_A          296 EPTILDLDYTPLYDLESGIKDYLPHIHAI  324 (362)
T ss_dssp             HHHHHHHCCCCCCCHHHHHHHHHHHHTCC
T ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence            999999999999 9999999999999764

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=1.6e-47  Score=338.09  Aligned_cols=294  Identities=16%  Similarity=0.177  Sum_probs=236.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcC-CCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccC--
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRR-TSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVE--   77 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~--   77 (334)
                      |+|||||||||||++|++.|+++| .++++++. ......+.  ..++++.+|++| +.+.++++++|+|||+|+...  
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~~--~~~~~~~~Dl~~-~~~~~~~~~~d~vih~a~~~~~~   77 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFVN--EAARLVKADLAA-DDIKDYLKGAEEVWHIAANPDVR   77 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGSC--TTEEEECCCTTT-SCCHHHHTTCSEEEECCCCCCCC
T ss_pred             CEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhcC--CCcEEEECcCCh-HHHHHHhcCCCEEEECCCCCChh
Confidence            479999999999999999999999 45555544 33332232  379999999999 899999999999999999643  


Q ss_pred             CCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHh
Q 019878           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA  157 (334)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~  157 (334)
                      .+..++...+++|+.++.+++++|++. ++++||++||.++||.....+.+|+.+..+   .+.|+.+|.++|.+++.+.
T Consensus        78 ~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~---~~~Y~~sK~~~e~~~~~~~  153 (313)
T 3ehe_A           78 IGAENPDEIYRNNVLATYRLLEAMRKA-GVSRIVFTSTSTVYGEAKVIPTPEDYPTHP---ISLYGASKLACEALIESYC  153 (313)
T ss_dssp             -CCCCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGGCSCSSSSBCTTSCCCC---CSHHHHHHHHHHHHHHHHH
T ss_pred             hhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEeCchHHhCcCCCCCCCCCCCCCC---CCHHHHHHHHHHHHHHHHH
Confidence            245667889999999999999999998 689999999999999887777777765444   5899999999999999987


Q ss_pred             h-cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcC-CCCccccCCCCceeeeeHHHHHHHHHHHhhcCCCCCeEEec-
Q 019878          158 S-EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNG-RLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLT-  234 (334)
Q Consensus       158 ~-~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g~~~~i~-  234 (334)
                      + .|++++++||+++|||+..  .+.+..++.+...+ ....+++++++.++|+|++|+|+++..+++....+++||++ 
T Consensus       154 ~~~g~~~~ilRp~~v~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~ni~~  231 (313)
T 3ehe_A          154 HTFDMQAWIYRFANVIGRRST--HGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDERVNIFNIGS  231 (313)
T ss_dssp             HHTTCEEEEEECSCEESTTCC--CSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCCSSEEEEECCC
T ss_pred             HhcCCCEEEEeeccccCcCCC--cChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccCCCCceEEECC
Confidence            5 6999999999999999864  24666777776666 44457788999999999999999999999966678999996 


Q ss_pred             CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhcCCCCC-
Q 019878          235 GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPR-  313 (334)
Q Consensus       235 g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~-  313 (334)
                      ++.+|+.|+++.+.+.+|.+++....+....                        .........+|++|++ +|||+|+ 
T Consensus       232 ~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~------------------------~~~~~~~~~~d~~k~~-~lG~~p~~  286 (313)
T 3ehe_A          232 EDQIKVKRIAEIVCEELGLSPRFRFTGGDRG------------------------WKGDVPVMLLSIEKLK-RLGWKPRY  286 (313)
T ss_dssp             SCCEEHHHHHHHHHHHTTCCCEEEEC------------------------------------CCBCCHHHH-HHTCCCSC
T ss_pred             CCCeeHHHHHHHHHHHhCCCCceEECCCccC------------------------CccccceeccCHHHHH-HcCCCCCC
Confidence            5789999999999999998765433221000                        0001123457999996 5999999 


Q ss_pred             CHHHHHHHHHHHHHhc
Q 019878          314 SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       314 ~~~e~i~~~~~~~~~~  329 (334)
                      +++++|+++++||+++
T Consensus       287 ~~~e~l~~~~~~~~~~  302 (313)
T 3ehe_A          287 NSEEAVRMAVRDLVED  302 (313)
T ss_dssp             CHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHhC
Confidence            9999999999999875

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=7.7e-47  Score=334.80  Aligned_cols=295  Identities=21%  Similarity=0.250  Sum_probs=241.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcC--CCEEEEeccccCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAALVEP   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vih~a~~~~~   78 (334)
                      |+|||||||||||++|++.|+++|++|++++|+... ..+    +++++.+|++|.+.+.+++++  +|+|||+||....
T Consensus        13 ~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~l----~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~   87 (321)
T 2pk3_A           13 MRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KLP----NVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKSSV   87 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CCT----TEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCH
T ss_pred             ceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-ccc----eeeEEECCCCCHHHHHHHHHhcCCCEEEEcCcccch
Confidence            679999999999999999999999999999998765 222    689999999999999999876  9999999997542


Q ss_pred             --CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccC--CCccCCCCCccccccccChHHHHHHHHHHHHH
Q 019878           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST--DGYIADENQVHEEKYFCTQYERSKAVADKIAL  154 (334)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~--~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~  154 (334)
                        +..++...+++|+.++.+++++|.+..++++||++||.++|+..  ...+.+|+++..+   .+.|+.+|.++|.+++
T Consensus        88 ~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~---~~~Y~~sK~~~E~~~~  164 (321)
T 2pk3_A           88 KDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRP---MSPYGVSKASVGMLAR  164 (321)
T ss_dssp             HHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBC---CSHHHHHHHHHHHHHH
T ss_pred             hhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCC---CCccHHHHHHHHHHHH
Confidence              33467789999999999999999776457899999999999976  4556666665443   5899999999999999


Q ss_pred             HHhh-cCCCEEEEecCceecCCCCCchhHHHHHHHHHHc---C--CCCccccCCCCceeeeeHHHHHHHHHHHhhcCCCC
Q 019878          155 QAAS-EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFN---G--RLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSG  228 (334)
Q Consensus       155 ~~~~-~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g  228 (334)
                      .+.+ +|++++++||+++|||+... ..++..++.....   +  .....++++++.++|+|++|+|++++.++.++..|
T Consensus       165 ~~~~~~gi~~~ilrp~~v~g~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~g  243 (321)
T 2pk3_A          165 QYVKAYGMDIIHTRTFNHIGPGQSL-GFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYGKTG  243 (321)
T ss_dssp             HHHHHHCCEEEEEEECEEECTTCCT-TSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHHCCTT
T ss_pred             HHHHHcCCCEEEEEeCcccCcCCCC-CchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhCCCCC
Confidence            8764 59999999999999998653 2344455554444   5  35556788889999999999999999999887678


Q ss_pred             CeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHh
Q 019878          229 ERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTE  307 (334)
Q Consensus       229 ~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~  307 (334)
                      ++||++ ++.+|+.|+++.+.+.+|.+.+....|.+                 ..+ .       ......+|++|++++
T Consensus       244 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~-----------------~~~-~-------~~~~~~~d~~k~~~~  298 (321)
T 2pk3_A          244 DVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPLQ-----------------LRP-S-------EVPTLIGSNKRLKDS  298 (321)
T ss_dssp             CEEEESCSCEEEHHHHHHHHHHHSSSCCEEEECGGG-----------------CCS-S-------CCSBCCBCCHHHHHH
T ss_pred             CeEEeCCCCCeeHHHHHHHHHHHhCCCCceeecccc-----------------CCC-c-------ccchhccCHHHHHHH
Confidence            999996 57799999999999999987665444310                 000 0       023456899999999


Q ss_pred             cCCCCC-CHHHHHHHHHHHHHhc
Q 019878          308 LGYNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       308 lG~~p~-~~~e~i~~~~~~~~~~  329 (334)
                      |||+|+ +++++|+++++|++++
T Consensus       299 lG~~p~~~~~e~l~~~~~~~~~~  321 (321)
T 2pk3_A          299 TGWKPRIPLEKSLFEILQSYRQA  321 (321)
T ss_dssp             HCCCCCSCHHHHHHHHHHHHHTC
T ss_pred             cCCCcCCCHHHHHHHHHHHHhcC
Confidence            999999 9999999999999763

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=1.1e-46  Score=336.14  Aligned_cols=298  Identities=24%  Similarity=0.331  Sum_probs=242.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC---C---CeEEEEEcCCCCC--C---CCCCCCCeEEEEcCCCChhhHHHHhcCCCEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ---G---HSVRALVRRTSDI--S---GLPSEGALELVYGDVTDYRSLVDACFGCHVI   69 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~---g---~~V~~~~r~~~~~--~---~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   69 (334)
                      |||||||||||||++|++.|+++   |   ++|++++|+....  .   .+....+++++.+|++|.+.+.+++.++|+|
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   80 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCEE
Confidence            89999999999999999999997   8   9999999975321  1   1111247899999999999999999999999


Q ss_pred             EEeccccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHH
Q 019878           70 FHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (334)
Q Consensus        70 ih~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~  147 (334)
                      ||+|+....  +..++..++++|+.++.+++++|.+. ++++||++||.++||.....+.+|+.+..+   .+.|+.+|.
T Consensus        81 ih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~-~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~---~~~Y~~sK~  156 (337)
T 1r6d_A           81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVSTNQVYGSIDSGSWTESSPLEP---NSPYAASKA  156 (337)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGGCCCSSSCBCTTSCCCC---CSHHHHHHH
T ss_pred             EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEecchHHhCCCCCCCCCCCCCCCC---CCchHHHHH
Confidence            999997432  22466778999999999999999998 689999999999999765555666654433   589999999


Q ss_pred             HHHHHHHHHhh-cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC
Q 019878          148 VADKIALQAAS-EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR  226 (334)
Q Consensus       148 ~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~  226 (334)
                      ++|.+++.+.+ .|++++++||+++|||+... .+++..++.....+....+++++++.++|+|++|+|+++..+++++.
T Consensus       157 ~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~  235 (337)
T 1r6d_A          157 GSDLVARAYHRTYGLDVRITRCCNNYGPYQHP-EKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR  235 (337)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECEEECTTCCT-TSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHCCCEEEEEeeeeECCCCCC-CChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCCC
Confidence            99999998764 59999999999999998643 34566667777777766677888999999999999999999998777


Q ss_pred             CCCeEEecC-CCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHH
Q 019878          227 SGERYLLTG-ENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAK  305 (334)
Q Consensus       227 ~g~~~~i~g-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~  305 (334)
                      .|++||+++ +.+|+.|+++.+.+.+|.+.+....                  ....+.        ....+.+|++|++
T Consensus       236 ~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~------------------~~~~~~--------~~~~~~~d~~k~~  289 (337)
T 1r6d_A          236 AGEIYHIGGGLELTNRELTGILLDSLGADWSSVRK------------------VADRKG--------HDLRYSLDGGKIE  289 (337)
T ss_dssp             TTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEE------------------ECCCTT--------CCCBCCBCCHHHH
T ss_pred             CCCEEEeCCCCCccHHHHHHHHHHHhCCCccccee------------------cCCCCC--------CcceeecCHHHHH
Confidence            789999974 6799999999999999986442211                  001000        0123457999999


Q ss_pred             HhcCCCCC-CHHHHHHHHHHHHHhc
Q 019878          306 TELGYNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       306 ~~lG~~p~-~~~e~i~~~~~~~~~~  329 (334)
                      ++|||+|+ +++++|+++++|++++
T Consensus       290 ~~lG~~p~~~~~e~l~~~~~~~~~~  314 (337)
T 1r6d_A          290 RELGYRPQVSFADGLARTVRWYREN  314 (337)
T ss_dssp             HHHCCCCCSCHHHHHHHHHHHHHHC
T ss_pred             HHcCCCCCCCHHHHHHHHHHHHHhc
Confidence            99999998 9999999999999764

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=100.00  E-value=2.1e-46  Score=335.16  Aligned_cols=317  Identities=20%  Similarity=0.266  Sum_probs=245.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC-CCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCCh-hhHHHHhcCCCEEEEeccccCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDY-RSLVDACFGCHVIFHTAALVEP   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~-~~~~~~~~~~d~vih~a~~~~~   78 (334)
                      |+|||||||||||++|++.|+++ |++|++++|+..+...+....+++++.+|++|. +.+.++++++|+|||+||....
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~~~~~   80 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP   80 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcccccCc
Confidence            89999999999999999999998 899999999876544333334799999999984 5678888899999999997542


Q ss_pred             --CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCcc----ccccccChHHHHHHHHHHH
Q 019878           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVH----EEKYFCTQYERSKAVADKI  152 (334)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~----~~~~~~~~Y~~sK~~~E~~  152 (334)
                        +..++...+++|+.++.+++++|++. + ++||++||.++|+.....+.+|+.+.    +...+.+.|+.+|.++|++
T Consensus        81 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~  158 (345)
T 2bll_A           81 IEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRV  158 (345)
T ss_dssp             HHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHH
T ss_pred             cchhcCHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHHHHHHH
Confidence              22456678899999999999999997 5 89999999999998765555665543    1123456899999999999


Q ss_pred             HHHHhh-cCCCEEEEecCceecCCCCC-------chhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhc
Q 019878          153 ALQAAS-EGLPIVPVYPGVIYGPGKLT-------TGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEK  224 (334)
Q Consensus       153 ~~~~~~-~g~~~~ilR~~~v~G~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~  224 (334)
                      ++.+.+ .|++++++||+++|||+...       ..+.+..++.....+....+++++++.++|+|++|+|++++.++++
T Consensus       159 ~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~  238 (345)
T 2bll_A          159 IWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIEN  238 (345)
T ss_dssp             HHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHC
T ss_pred             HHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhh
Confidence            998764 69999999999999998642       1345667777777888777788889999999999999999999987


Q ss_pred             C---CCCCeEEecC-C-CCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhcccee
Q 019878          225 G---RSGERYLLTG-E-NASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAY  299 (334)
Q Consensus       225 ~---~~g~~~~i~g-~-~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (334)
                      +   ..|++||+++ + .+|+.|+++.+.+.+|.+.+....|.+........    ....+.       .. .......+
T Consensus       239 ~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~----~~~~~~-------~~-~~~~~~~~  306 (345)
T 2bll_A          239 AGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVES----SSYYGK-------GY-QDVEHRKP  306 (345)
T ss_dssp             GGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------------------CCCCCB
T ss_pred             ccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcccccCccccccccccc----hhhccc-------cc-cchhhhcc
Confidence            5   3588999975 4 69999999999999988765444432110000000    000000       00 01234567


Q ss_pred             chHHHHHhcCCCCC-CHHHHHHHHHHHHHhcCC
Q 019878          300 SCVKAKTELGYNPR-SLKEGLQEVLPWLRSSGM  331 (334)
Q Consensus       300 d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~~~  331 (334)
                      |++|++++|||+|+ +++++|+++++|++++..
T Consensus       307 d~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~~  339 (345)
T 2bll_A          307 SIRNAHRCLDWEPKIDMQETIDETLDFFLRTVD  339 (345)
T ss_dssp             CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHSC
T ss_pred             cHHHHHHhcCCCccccHHHHHHHHHHHHHHcCC
Confidence            99999999999998 999999999999987643

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=9.7e-47  Score=332.74  Aligned_cols=293  Identities=23%  Similarity=0.298  Sum_probs=238.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC-CCCCCCCCeEEEEcCCCChhhHHHHhc--CCCEEEEeccccC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-SGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVE   77 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vih~a~~~~   77 (334)
                      |+||||||+||||++++++|+++|++|++++|..... ..+.  .+++++.+|++|.+.+.++++  ++|+|||+|+...
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~   78 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVP--KGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQAS   78 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGSC--TTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCCC
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhcc--cCeEEEECCCCCHHHHHHHHHhcCCCEEEECccccC
Confidence            8999999999999999999999999999999854321 2222  267899999999999999988  7999999998643


Q ss_pred             C--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEeccc-ceecc-CCCccCCCCCccccccccChHHHHHHHHHHHH
Q 019878           78 P--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF-FALGS-TDGYIADENQVHEEKYFCTQYERSKAVADKIA  153 (334)
Q Consensus        78 ~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~-~v~~~-~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~  153 (334)
                      .  +..++...+++|+.++.+++++|++. ++++||++||. ++||. ....+.+|+.+..+   .+.|+.+|.++|.++
T Consensus        79 ~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~---~~~Y~~sK~~~e~~~  154 (311)
T 2p5y_A           79 VKVSVEDPVLDFEVNLLGGLNLLEACRQY-GVEKLVFASTGGAIYGEVPEGERAEETWPPRP---KSPYAASKAAFEHYL  154 (311)
T ss_dssp             HHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCC---CSHHHHHHHHHHHHH
T ss_pred             chhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCChhhcCCCCCCCCcCCCCCCCC---CChHHHHHHHHHHHH
Confidence            2  23456678999999999999999987 68999999999 89986 44445556554333   588999999999999


Q ss_pred             HHHhh-cCCCEEEEecCceecCCCCCc--hhHHHHHHHHHHcCCCCccc-----cCCCCceeeeeHHHHHHHHHHHhhcC
Q 019878          154 LQAAS-EGLPIVPVYPGVIYGPGKLTT--GNLVAKLMIERFNGRLPGYI-----GYGNDRFSFCHVDDVVDGHIAAMEKG  225 (334)
Q Consensus       154 ~~~~~-~g~~~~ilR~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~v~D~a~a~~~~~~~~  225 (334)
                      +.+.+ .|++++++||+++|||+....  .+++..++.+...+....++     +++++.++|+|++|+|+++..+++++
T Consensus       155 ~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~  234 (311)
T 2p5y_A          155 SVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFSL  234 (311)
T ss_dssp             HHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHHC
T ss_pred             HHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhCC
Confidence            98764 699999999999999986432  34566666666677766666     78889999999999999999999875


Q ss_pred             CCCCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHH
Q 019878          226 RSGERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKA  304 (334)
Q Consensus       226 ~~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~  304 (334)
                        +++||++ |+.+|+.|+++.+.+.+|.+.+....|.                   .+ .       ......+|++|+
T Consensus       235 --~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-------------------~~-~-------~~~~~~~d~~k~  285 (311)
T 2p5y_A          235 --EGIYNVGTGEGHTTREVLMAVAEAAGKAPEVQPAPP-------------------RP-G-------DLERSVLSPLKL  285 (311)
T ss_dssp             --CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEEECC-------------------CT-T-------CCSBCCBCCHHH
T ss_pred             --CCEEEeCCCCCccHHHHHHHHHHHhCCCCCceeCCC-------------------Cc-c-------chhhccCCHHHH
Confidence              8899996 5789999999999999998766543331                   00 0       012356899999


Q ss_pred             HHhcCCCCC-CHHHHHHHHHHHHHhc
Q 019878          305 KTELGYNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       305 ~~~lG~~p~-~~~e~i~~~~~~~~~~  329 (334)
                      ++ |||+|+ +++++|+++++|++++
T Consensus       286 ~~-lg~~p~~~~~~~l~~~~~~~~~~  310 (311)
T 2p5y_A          286 MA-HGWRPKVGFQEGIRLTVDHFRGA  310 (311)
T ss_dssp             HT-TTCCCSSCHHHHHHHHHHHHHTC
T ss_pred             HH-CCCCCCCCHHHHHHHHHHHHHhh
Confidence            99 999998 9999999999999763

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=1.9e-46  Score=334.40  Aligned_cols=299  Identities=20%  Similarity=0.288  Sum_probs=239.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCC--CC---CCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSD--IS---GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~--~~---~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a   73 (334)
                      |+|||||||||||++|++.|+++|  ++|++++|+...  ..   .+....+++++.+|++|.+.+.+++.++|+|||+|
T Consensus         4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A   83 (336)
T 2hun_A            4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVHLA   83 (336)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEECC
T ss_pred             CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEECC
Confidence            789999999999999999999986  899999987521  11   12222478999999999999999999999999999


Q ss_pred             cccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHH
Q 019878           74 ALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADK  151 (334)
Q Consensus        74 ~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~  151 (334)
                      |....  +..++..++++|+.++.+++++|.+.+..++||++||.++||.....+.+|+.+..+   .+.|+.+|.++|.
T Consensus        84 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~---~~~Y~~sK~~~e~  160 (336)
T 2hun_A           84 AESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMP---SSPYSATKAASDM  160 (336)
T ss_dssp             CCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCC---CSHHHHHHHHHHH
T ss_pred             CCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCC---CCccHHHHHHHHH
Confidence            97432  234567789999999999999999984347999999999999765556666654443   5899999999999


Q ss_pred             HHHHHhh-cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCCCCe
Q 019878          152 IALQAAS-EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGER  230 (334)
Q Consensus       152 ~~~~~~~-~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g~~  230 (334)
                      +++.+.. .|++++++||+++|||+... .+++..++.....+....+++++++.++|+|++|+|+++..+++++..|++
T Consensus       161 ~~~~~~~~~~~~~~ilrp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~g~~  239 (336)
T 2hun_A          161 LVLGWTRTYNLNASITRCTNNYGPYQFP-EKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGESREI  239 (336)
T ss_dssp             HHHHHHHHTTCEEEEEEECEEESTTCCT-TSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHCCTTCE
T ss_pred             HHHHHHHHhCCCEEEEeeeeeeCcCCCc-CchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCCCCCCE
Confidence            9998875 69999999999999998643 345666666777777766778888999999999999999999987777899


Q ss_pred             EEecC-CCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhcC
Q 019878          231 YLLTG-ENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELG  309 (334)
Q Consensus       231 ~~i~g-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG  309 (334)
                      ||+++ +.+|+.|+++.+.+.+|.+.+.....                  ...+.        ....+.+|++|++++||
T Consensus       240 ~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~------------------~~~~~--------~~~~~~~d~~k~~~~lG  293 (336)
T 2hun_A          240 YNISAGEEKTNLEVVKIILRLMGKGEELIELV------------------EDRPG--------HDLRYSLDSWKITRDLK  293 (336)
T ss_dssp             EEECCSCEECHHHHHHHHHHHTTCCSTTEEEE------------------CCCTT--------CCCCCCBCCHHHHHHHC
T ss_pred             EEeCCCCcccHHHHHHHHHHHhCCCccccccc------------------CCCCC--------chhhhcCCHHHHHHHhC
Confidence            99975 67999999999999999875432210                  01000        01234579999999999


Q ss_pred             CCCC-CHHHHHHHHHHHHHhc
Q 019878          310 YNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       310 ~~p~-~~~e~i~~~~~~~~~~  329 (334)
                      |+|+ +++++|+++++|++++
T Consensus       294 ~~p~~~~~~~l~~~~~~~~~~  314 (336)
T 2hun_A          294 WRPKYTFDEGIKKTIDWYLKN  314 (336)
T ss_dssp             CCCSSCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCHHHHHHHHHHHHHhC
Confidence            9998 9999999999999765

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=2.3e-46  Score=338.93  Aligned_cols=301  Identities=21%  Similarity=0.277  Sum_probs=235.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCC-CCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDIS-GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~-~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~   78 (334)
                      |+|||||||||||++|++.|+++| ++|++++|+..... .+...++++++.+|++|.+.+.++++++|+|||+|+....
T Consensus        33 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~~~~~  112 (377)
T 2q1s_A           33 TNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLATYHGN  112 (377)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCCCSCH
T ss_pred             CEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCCccCc
Confidence            679999999999999999999999 99999999865432 2222347999999999999999999999999999997432


Q ss_pred             --CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCC--CCCccccc-cccChHHHHHHHHHHHH
Q 019878           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIAD--ENQVHEEK-YFCTQYERSKAVADKIA  153 (334)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~--e~~~~~~~-~~~~~Y~~sK~~~E~~~  153 (334)
                        +..++...+++|+.++.+++++|++..++++||++||.++||.....+.+  |+....+. .+.++|+.+|.++|.++
T Consensus       113 ~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~  192 (377)
T 2q1s_A          113 QSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYS  192 (377)
T ss_dssp             HHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHHHHHHHHHHHHH
T ss_pred             hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHHHHHHHHHHH
Confidence              22356778999999999999999886357899999999999976654555  55421111 23588999999999999


Q ss_pred             HHHhh-cCCCEEEEecCceecCCC---------CCc---hhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHH-HH
Q 019878          154 LQAAS-EGLPIVPVYPGVIYGPGK---------LTT---GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDG-HI  219 (334)
Q Consensus       154 ~~~~~-~g~~~~ilR~~~v~G~~~---------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a-~~  219 (334)
                      +.+.+ .|++++++||+++||++.         ...   .+++..++.....+....+++++++.++|+|++|+|++ ++
T Consensus       193 ~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~  272 (377)
T 2q1s_A          193 VYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVANGLIA  272 (377)
T ss_dssp             HHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHHHHH
T ss_pred             HHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHH
Confidence            98764 599999999999999976         211   34566777777778777778888999999999999999 99


Q ss_pred             HHhhcCCCCCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhc-cc
Q 019878          220 AAMEKGRSGERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAH-QW  297 (334)
Q Consensus       220 ~~~~~~~~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  297 (334)
                      .+++++..| +||++ ++.+|+.|+++.+.+.+|.+.+....|.                       .+.    ... ..
T Consensus       273 ~~~~~~~~g-~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~-----------------------~~~----~~~~~~  324 (377)
T 2q1s_A          273 CAADGTPGG-VYNIASGKETSIADLATKINEITGNNTELDRLPK-----------------------RPW----DNSGKR  324 (377)
T ss_dssp             HHHHCCTTE-EEECCCCCCEEHHHHHHHHHHHHTCCSCCCCCCC-----------------------CGG----GCC-CC
T ss_pred             HHHhcCCCC-eEEecCCCceeHHHHHHHHHHHhCCCCCceeCCC-----------------------Ccc----cccccc
Confidence            999876667 99997 5789999999999999998765543331                       000    012 45


Q ss_pred             eechHHHHHhcCCCCC-CHHHHHHHHHHHHHhc
Q 019878          298 AYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       298 ~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~  329 (334)
                      .+|++|++++|||+|+ +++++|+++++|++++
T Consensus       325 ~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  357 (377)
T 2q1s_A          325 FGSPEKARRELGFSADVSIDDGLRKTIEWTKAN  357 (377)
T ss_dssp             CCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHT
T ss_pred             ccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHh
Confidence            6899999999999998 9999999999999764

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-46  Score=336.53  Aligned_cols=298  Identities=20%  Similarity=0.258  Sum_probs=239.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC------CCCeEEEEcCCCChhhHHHHhc--CCCEEEEe
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------EGALELVYGDVTDYRSLVDACF--GCHVIFHT   72 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~v~~~~~Dl~d~~~~~~~~~--~~d~vih~   72 (334)
                      |+|||||||||||+++++.|+++|++|++++|+.........      ..+++++.+|++|.+++.++++  ++|+|||+
T Consensus         6 ~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   85 (341)
T 3enk_A            6 GTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAIHF   85 (341)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             cEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEEEC
Confidence            579999999999999999999999999999998765432110      1268999999999999999998  79999999


Q ss_pred             ccccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHH
Q 019878           73 AALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD  150 (334)
Q Consensus        73 a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E  150 (334)
                      ||....  ...++...++.|+.++.++++++++. ++++||++||.++||.....+.+|+.+..+   .+.|+.+|.++|
T Consensus        86 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~---~~~Y~~sK~~~e  161 (341)
T 3enk_A           86 AALKAVGESVAKPIEYYRNNLDSLLSLLRVMRER-AVKRIVFSSSATVYGVPERSPIDETFPLSA---TNPYGQTKLMAE  161 (341)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGBCSCSSSSBCTTSCCBC---SSHHHHHHHHHH
T ss_pred             ccccccCccccChHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEecceEecCCCCCCCCCCCCCCC---CChhHHHHHHHH
Confidence            997432  23455678899999999999999997 689999999999999877777777766554   589999999999


Q ss_pred             HHHHHHhh-c-CCCEEEEecCceecCCCCC---------chhHHHHHHHHHHcCC--CCcccc------CCCCceeeeeH
Q 019878          151 KIALQAAS-E-GLPIVPVYPGVIYGPGKLT---------TGNLVAKLMIERFNGR--LPGYIG------YGNDRFSFCHV  211 (334)
Q Consensus       151 ~~~~~~~~-~-g~~~~ilR~~~v~G~~~~~---------~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~i~v  211 (334)
                      .+++.+.. . +++++++||+++|||+...         ...++. ++.+...+.  ...++|      ++++.++|+|+
T Consensus       162 ~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v  240 (341)
T 3enk_A          162 QILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMP-YVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHV  240 (341)
T ss_dssp             HHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHH-HHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEH
T ss_pred             HHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHH-HHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEH
Confidence            99998774 4 4999999999999995421         123333 444444443  333445      78899999999


Q ss_pred             HHHHHHHHHHhhc---CCCCCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCH
Q 019878          212 DDVVDGHIAAMEK---GRSGERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISY  287 (334)
Q Consensus       212 ~D~a~a~~~~~~~---~~~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (334)
                      +|+|++++.++++   ...+++||++ ++.+|+.|+++.+.+.+|.+.+....|.                   .+.   
T Consensus       241 ~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-------------------~~~---  298 (341)
T 3enk_A          241 VDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYELVAR-------------------RPG---  298 (341)
T ss_dssp             HHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCCCEEEECC-------------------CTT---
T ss_pred             HHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCcceeeCCC-------------------CCC---
Confidence            9999999999986   3568999996 6889999999999999999877654331                   000   


Q ss_pred             HHHHHhhccceechHHHHHhcCCCCC-CHHHHHHHHHHHHHhcC
Q 019878          288 PTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSSG  330 (334)
Q Consensus       288 ~~~~~~~~~~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~~  330 (334)
                           ......+|++|++++|||+|+ +++++|+++++||+++.
T Consensus       299 -----~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~  337 (341)
T 3enk_A          299 -----DVAECYANPAAAAETIGWKAERDLERMCADHWRWQENNP  337 (341)
T ss_dssp             -----CCSEECBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHST
T ss_pred             -----CccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcC
Confidence                 012446799999999999998 99999999999999874

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=9.9e-46  Score=331.84  Aligned_cols=300  Identities=22%  Similarity=0.316  Sum_probs=242.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC-CCCC---------CCCeEEEEcCCCChhhHHHHhcCCCEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-GLPS---------EGALELVYGDVTDYRSLVDACFGCHVIF   70 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~---------~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   70 (334)
                      |+|||||||||||++|++.|+++|++|++++|+..... .+..         ..+++++.+|++|.+.+.++++++|+||
T Consensus        28 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi  107 (352)
T 1sb8_A           28 KVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDYVL  107 (352)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCCEEE
Confidence            67999999999999999999999999999999764211 0100         1378999999999999999999999999


Q ss_pred             EeccccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHH
Q 019878           71 HTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAV  148 (334)
Q Consensus        71 h~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~  148 (334)
                      |+|+....  +..++...+++|+.++.+++++|.+. ++++||++||.++|+.....+.+|+.+..+   .+.|+.+|.+
T Consensus       108 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~---~~~Y~~sK~~  183 (352)
T 1sb8_A          108 HQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYAASSSTYGDHPGLPKVEDTIGKP---LSPYAVTKYV  183 (352)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGGTTCCCSSBCTTCCCCC---CSHHHHHHHH
T ss_pred             ECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHhcCCCCCCCCCCCCCCCC---CChhHHHHHH
Confidence            99997432  22456778899999999999999997 789999999999999876666667665443   5899999999


Q ss_pred             HHHHHHHHhh-cCCCEEEEecCceecCCCCCc---hhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhc
Q 019878          149 ADKIALQAAS-EGLPIVPVYPGVIYGPGKLTT---GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEK  224 (334)
Q Consensus       149 ~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~  224 (334)
                      +|.+++.+.+ .|++++++||+++|||+....   ..++..++.....+..+.+++++++.++|+|++|+|++++.++..
T Consensus       184 ~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~  263 (352)
T 1sb8_A          184 NELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATA  263 (352)
T ss_dssp             HHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhc
Confidence            9999998764 599999999999999986432   145666666777788777788899999999999999999999876


Q ss_pred             C--CCCCeEEec-CCCCCHHHHHHHHHHHh---CCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccce
Q 019878          225 G--RSGERYLLT-GENASFMQIFDMAAVIT---GTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWA  298 (334)
Q Consensus       225 ~--~~g~~~~i~-g~~~s~~e~~~~i~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (334)
                      .  ..+++||++ ++.+|+.|+++.+.+.+   |.+.+..+..                 .+..+    .    ......
T Consensus       264 ~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~~~-----------------~~~~~----~----~~~~~~  318 (352)
T 1sb8_A          264 GLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVY-----------------RDFRE----G----DVRHSL  318 (352)
T ss_dssp             CGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEE-----------------ECCCT----T----CCSBCC
T ss_pred             cccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCCcee-----------------cCCCc----c----chhhcc
Confidence            2  468899996 67899999999999999   8776532110                 00000    0    012346


Q ss_pred             echHHHHHhcCCCCC-CHHHHHHHHHHHHHhc
Q 019878          299 YSCVKAKTELGYNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       299 ~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~  329 (334)
                      +|++|++++|||+|+ +++++|+++++||+++
T Consensus       319 ~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~  350 (352)
T 1sb8_A          319 ADISKAAKLLGYAPKYDVSAGVALAMPWYIMF  350 (352)
T ss_dssp             BCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence            799999999999998 9999999999999764

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=100.00  E-value=5.6e-46  Score=334.11  Aligned_cols=299  Identities=19%  Similarity=0.271  Sum_probs=237.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC----CCCCeEEEEcCCCChhhHHHHhcC--CCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----SEGALELVYGDVTDYRSLVDACFG--CHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vih~a~   74 (334)
                      |+|||||||||||++|++.|+++|++|++++|++.....+.    ...+++++.+|++|.+.+.+++++  +|+|||+||
T Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~   89 (357)
T 1rkx_A           10 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMAA   89 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEECCC
Confidence            68999999999999999999999999999999876543221    123789999999999999999886  899999999


Q ss_pred             ccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCC-ccCCCCCccccccccChHHHHHHHHHH
Q 019878           75 LVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG-YIADENQVHEEKYFCTQYERSKAVADK  151 (334)
Q Consensus        75 ~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~-~~~~e~~~~~~~~~~~~Y~~sK~~~E~  151 (334)
                      ....  +..++...+++|+.++.+++++|.+.+.+++||++||.++||.... .+..|+++..   +.+.|+.+|.++|+
T Consensus        90 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~---~~~~Y~~sK~~~e~  166 (357)
T 1rkx_A           90 QPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMG---GYDPYSNSKGCAEL  166 (357)
T ss_dssp             CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBC---CSSHHHHHHHHHHH
T ss_pred             CcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCC---CCCccHHHHHHHHH
Confidence            5321  2345677899999999999999999744889999999999997653 3445554333   35889999999999


Q ss_pred             HHHHHhh----------cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHH
Q 019878          152 IALQAAS----------EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAA  221 (334)
Q Consensus       152 ~~~~~~~----------~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~  221 (334)
                      +++.+..          .|++++++||+++|||+.....+++..++.....+..+.+ +++++.++|+|++|+|++++.+
T Consensus       167 ~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~v~v~Dva~a~~~~  245 (357)
T 1rkx_A          167 VTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVII-RNPHAIRPWQHVLEPLSGYLLL  245 (357)
T ss_dssp             HHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEEC-SCTTCEECCEETHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEE-CCCCCeeccEeHHHHHHHHHHH
Confidence            9998763          2899999999999999865434567777777777766544 4567899999999999999998


Q ss_pred             hhc-----CCCCCeEEecC---CCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHh
Q 019878          222 MEK-----GRSGERYLLTG---ENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVL  293 (334)
Q Consensus       222 ~~~-----~~~g~~~~i~g---~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (334)
                      +++     ...+++||+++   +.+|+.|+++.+.+.+|.+.+....+.                    +  .    ...
T Consensus       246 ~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~--------------------~--~----~~~  299 (357)
T 1rkx_A          246 AQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGN--------------------A--H----PHE  299 (357)
T ss_dssp             HHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC---------------------------------C
T ss_pred             HHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCccccCCC--------------------C--C----CcC
Confidence            874     24578999973   469999999999999998765422110                    0  0    011


Q ss_pred             hccceechHHHHHhcCCCCC-CHHHHHHHHHHHHHhc
Q 019878          294 AHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       294 ~~~~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~  329 (334)
                      .....+|++|++++|||+|+ +++++|+++++|++++
T Consensus       300 ~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  336 (357)
T 1rkx_A          300 AHYLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKNW  336 (357)
T ss_dssp             CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred             cccccCCHHHHHHHhCCCcCCcHHHHHHHHHHHHHHH
Confidence            23456899999999999998 9999999999999764

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=1.5e-45  Score=333.82  Aligned_cols=297  Identities=19%  Similarity=0.182  Sum_probs=241.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCC--
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP--   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~--   78 (334)
                      |+|||||||||||++|++.|+++|++|++++|+........ ..+++++.+|++|.+.+.++++++|+|||+|+....  
T Consensus        30 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~  108 (379)
T 2c5a_A           30 LKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED-MFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMG  108 (379)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG-GTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCCHH
T ss_pred             CeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc-cCCceEEECCCCCHHHHHHHhCCCCEEEECceecCccc
Confidence            57999999999999999999999999999999876543221 136899999999999999999999999999997543  


Q ss_pred             -CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCC-----ccCCCCCccccccccChHHHHHHHHHHH
Q 019878           79 -WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG-----YIADENQVHEEKYFCTQYERSKAVADKI  152 (334)
Q Consensus        79 -~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~-----~~~~e~~~~~~~~~~~~Y~~sK~~~E~~  152 (334)
                       +..++...+++|+.++.+++++|++. ++++||++||.++|+....     .+.+|++.. +..+.+.|+.+|.++|.+
T Consensus       109 ~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~-~~~~~~~Y~~sK~~~E~~  186 (379)
T 2c5a_A          109 FIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYASSACIYPEFKQLETTNVSLKESDAW-PAEPQDAFGLEKLATEEL  186 (379)
T ss_dssp             HHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGS-SBCCSSHHHHHHHHHHHH
T ss_pred             ccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEeehheeCCCCCCCccCCCcCcccCC-CCCCCChhHHHHHHHHHH
Confidence             14567788999999999999999997 7899999999999986432     234444311 223458899999999999


Q ss_pred             HHHHhh-cCCCEEEEecCceecCCCCCch---hHHHHHHHHHHcCCC-CccccCCCCceeeeeHHHHHHHHHHHhhcCCC
Q 019878          153 ALQAAS-EGLPIVPVYPGVIYGPGKLTTG---NLVAKLMIERFNGRL-PGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRS  227 (334)
Q Consensus       153 ~~~~~~-~g~~~~ilR~~~v~G~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~  227 (334)
                      ++.+.+ .|++++++||+++|||+.....   ..+..++.....+.. ..+++++++.++|+|++|+|+++..+++++ .
T Consensus       187 ~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~-~  265 (379)
T 2c5a_A          187 CKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD-F  265 (379)
T ss_dssp             HHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS-C
T ss_pred             HHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHhhcc-C
Confidence            998764 6999999999999999754321   255666666666765 556788889999999999999999999876 6


Q ss_pred             CCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHH
Q 019878          228 GERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKT  306 (334)
Q Consensus       228 g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~  306 (334)
                      +++||++ ++.+|+.|+++.+.+.+|.+.+...+|.+                    .        ......+|++|+++
T Consensus       266 ~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~--------------------~--------~~~~~~~d~~k~~~  317 (379)
T 2c5a_A          266 REPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGP--------------------E--------GVRGRNSDNNLIKE  317 (379)
T ss_dssp             CSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCC--------------------C--------CCSBCEECCHHHHH
T ss_pred             CCeEEeCCCCccCHHHHHHHHHHHhCCCCceeeCCCC--------------------C--------CcccccCCHHHHHH
Confidence            7799996 57899999999999999988766544310                    0        01234679999999


Q ss_pred             hcCCCCC-CHHHHHHHHHHHHHhc
Q 019878          307 ELGYNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       307 ~lG~~p~-~~~e~i~~~~~~~~~~  329 (334)
                      +|||+|+ +++++|+++++|++++
T Consensus       318 ~lG~~p~~~l~e~l~~~~~~~~~~  341 (379)
T 2c5a_A          318 KLGWAPNMRLKEGLRITYFWIKEQ  341 (379)
T ss_dssp             HHSCCCCCCHHHHHHHHHHHHHHH
T ss_pred             HhCCCCCCCHHHHHHHHHHHHHHh
Confidence            9999999 9999999999999764

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.5e-46  Score=332.11  Aligned_cols=290  Identities=19%  Similarity=0.156  Sum_probs=233.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcC--CCEEEEeccccCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAALVEP   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vih~a~~~~~   78 (334)
                      |+|||||||||||++|++.|+++|+      +....      ...++++.+|++|.+.+.+++++  +|+|||+|+....
T Consensus         7 ~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~------~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A~~~~~   74 (319)
T 4b8w_A            7 MRILVTGGSGLVGKAIQKVVADGAG------LPGED------WVFVSSKDADLTDTAQTRALFEKVQPTHVIHLAAMVGG   74 (319)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHTTTC------CTTCE------EEECCTTTCCTTSHHHHHHHHHHSCCSEEEECCCCCCC
T ss_pred             CeEEEECCCcHHHHHHHHHHHhcCC------ccccc------ccccCceecccCCHHHHHHHHhhcCCCEEEECceeccc
Confidence            6899999999999999999999998      11110      01345567999999999999987  9999999998542


Q ss_pred             ---CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccc-cccccC-hHHHHHHHHHHHH
Q 019878           79 ---WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHE-EKYFCT-QYERSKAVADKIA  153 (334)
Q Consensus        79 ---~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~-~~~~~~-~Y~~sK~~~E~~~  153 (334)
                         +..++...+++|+.++.+++++|++. ++++|||+||.++||.....+.+|+.+.. +..+.+ +|+.+|.++|+++
T Consensus        75 ~~~~~~~~~~~~~~nv~gt~~ll~a~~~~-~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~  153 (319)
T 4b8w_A           75 LFRNIKYNLDFWRKNVHMNDNVLHSAFEV-GARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQN  153 (319)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHHHHHH
T ss_pred             ccccccCHHHHHHHHHHHHHHHHHHHHHc-CCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHHHHHHHHH
Confidence               34567788999999999999999998 68999999999999988777777776321 122234 6999999999999


Q ss_pred             HHHhh-cCCCEEEEecCceecCCCCCc---hhHHHHHHHH----HHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcC
Q 019878          154 LQAAS-EGLPIVPVYPGVIYGPGKLTT---GNLVAKLMIE----RFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG  225 (334)
Q Consensus       154 ~~~~~-~g~~~~ilR~~~v~G~~~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~  225 (334)
                      +.+.+ .|++++++||+++|||+....   ..++..++.+    ...+....+++++++.++|+|++|+|+++..+++++
T Consensus       154 ~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~  233 (319)
T 4b8w_A          154 RAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLREY  233 (319)
T ss_dssp             HHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHHHHHHC
T ss_pred             HHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHHHHhcc
Confidence            99875 699999999999999986432   2345555555    677888888899999999999999999999999885


Q ss_pred             C--CCCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechH
Q 019878          226 R--SGERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCV  302 (334)
Q Consensus       226 ~--~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  302 (334)
                      .  .+++||++ ++.+|+.|+++.+.+.+|.+.+....|.                   .+.        ......+|++
T Consensus       234 ~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-------------------~~~--------~~~~~~~d~~  286 (319)
T 4b8w_A          234 NEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTT-------------------KSD--------GQFKKTASNS  286 (319)
T ss_dssp             CCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSCEEEETT-------------------SCC--------CCSCCCBCCH
T ss_pred             ccCCceEEEecCCCceeHHHHHHHHHHHhCCCCcEEeCCC-------------------CCc--------CcccccCCHH
Confidence            4  36799996 6889999999999999998776543321                   000        0123458999


Q ss_pred             HHHHhcCCCCC-CHHHHHHHHHHHHHhcC
Q 019878          303 KAKTELGYNPR-SLKEGLQEVLPWLRSSG  330 (334)
Q Consensus       303 k~~~~lG~~p~-~~~e~i~~~~~~~~~~~  330 (334)
                      |++++|||+|. +++++|+++++||+++.
T Consensus       287 k~~~~lg~~p~~~~~~~l~~~~~~~~~~~  315 (319)
T 4b8w_A          287 KLRTYLPDFRFTPFKQAVKETCAWFTDNY  315 (319)
T ss_dssp             HHHHHCTTCCCCCHHHHHHHHHHHHHHSC
T ss_pred             HHHHhcCCCCCCCHHHHHHHHHHHHHHHH
Confidence            99999999999 99999999999998864

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=1.6e-45  Score=327.66  Aligned_cols=297  Identities=21%  Similarity=0.289  Sum_probs=236.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC-CCCCCCCeEEEEcCCCChhhHHHHhc--CCCEEEEeccccC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-GLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVE   77 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vih~a~~~~   77 (334)
                      |+|||||||||||++|++.|+++|++|++++|+..... .+.  ++++++.+|++|.+.+.++++  ++|+|||+|+...
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~~   79 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAIT--EGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADSL   79 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSC--TTSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcC--CCcEEEECCCCCHHHHHHHHhhcCCCEEEECCcccC
Confidence            58999999999999999999999999999999765322 222  268999999999999999998  8999999999743


Q ss_pred             C--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHH
Q 019878           78 P--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ  155 (334)
Q Consensus        78 ~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~  155 (334)
                      .  +..++...+++|+.++.+++++|++. ++++||++||.++|+.....+.+|+++..+   .+.|+.+|.++|++++.
T Consensus        80 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~---~~~Y~~sK~~~e~~~~~  155 (330)
T 2c20_A           80 VGVSMEKPLQYYNNNVYGALCLLEVMDEF-KVDKFIFSSTAATYGEVDVDLITEETMTNP---TNTYGETKLAIEKMLHW  155 (330)
T ss_dssp             HHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGGGCSCSSSSBCTTSCCCC---SSHHHHHHHHHHHHHHH
T ss_pred             ccccccCHHHHHHHHhHHHHHHHHHHHHc-CCCEEEEeCCceeeCCCCCCCCCcCCCCCC---CChHHHHHHHHHHHHHH
Confidence            2  22456778899999999999999997 689999999999999776666777765443   58999999999999999


Q ss_pred             Hhh-cCCCEEEEecCceecCCCCC--------chhHHHHHHHHHHcCC-CCcccc------CCCCceeeeeHHHHHHHHH
Q 019878          156 AAS-EGLPIVPVYPGVIYGPGKLT--------TGNLVAKLMIERFNGR-LPGYIG------YGNDRFSFCHVDDVVDGHI  219 (334)
Q Consensus       156 ~~~-~g~~~~ilR~~~v~G~~~~~--------~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~i~v~D~a~a~~  219 (334)
                      +.+ .|++++++||+++||++...        ...++..++.....+. ...+++      ++++.++|+|++|+|+++.
T Consensus       156 ~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~  235 (330)
T 2c20_A          156 YSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHF  235 (330)
T ss_dssp             HHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHH
T ss_pred             HHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHH
Confidence            875 59999999999999996311        1234444443333222 333444      6788999999999999999


Q ss_pred             HHhhcCC---CCCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhc
Q 019878          220 AAMEKGR---SGERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAH  295 (334)
Q Consensus       220 ~~~~~~~---~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (334)
                      .+++++.   .+++||++ ++.+|+.|+++.+.+.+|.+.+....|.                   .+ .       ...
T Consensus       236 ~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-------------------~~-~-------~~~  288 (330)
T 2c20_A          236 LGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPR-------------------RA-G-------DPA  288 (330)
T ss_dssp             HHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCCCEEEECC-------------------CS-S-------CCS
T ss_pred             HHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCC-------------------CC-C-------ccc
Confidence            9998642   36899996 5789999999999999998766543321                   00 0       012


Q ss_pred             cceechHHHHHhcCCCCC--CHHHHHHHHHHHHHhcC
Q 019878          296 QWAYSCVKAKTELGYNPR--SLKEGLQEVLPWLRSSG  330 (334)
Q Consensus       296 ~~~~d~~k~~~~lG~~p~--~~~e~i~~~~~~~~~~~  330 (334)
                      ...+|++|++++|||+|+  +++++|+++++|++++.
T Consensus       289 ~~~~d~~k~~~~lG~~p~~~~l~~~l~~~~~~~~~~~  325 (330)
T 2c20_A          289 RLVASSQKAKEKLGWDPRYVNVKTIIEHAWNWHQKQP  325 (330)
T ss_dssp             EECBCCHHHHHHHCCCCSCCCHHHHHHHHHHHHHHCS
T ss_pred             ccccCHHHHHHHhCCCCccCCHHHHHHHHHHHHHHhh
Confidence            346799999999999998  89999999999998763

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-45  Score=328.96  Aligned_cols=300  Identities=19%  Similarity=0.183  Sum_probs=238.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC-----CCCCCCCeEEEEcCCCChhhHHHHhcC--CCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-----GLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vih~a   73 (334)
                      |+|||||||||||++|++.|+++|++|++++|+.....     .+....+++++.+|++|.+.+.+++++  +|+|||+|
T Consensus        15 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~A   94 (335)
T 1rpn_A           15 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA   94 (335)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEEECc
Confidence            78999999999999999999999999999999876421     111123689999999999999999875  79999999


Q ss_pred             cccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCC-cEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHH
Q 019878           74 ALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTV-EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD  150 (334)
Q Consensus        74 ~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E  150 (334)
                      |....  +..++...+++|+.++.+++++|.+. ++ ++||++||.++|+.....+.+|+.+..+   .+.|+.+|.++|
T Consensus        95 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p---~~~Y~~sK~~~e  170 (335)
T 1rpn_A           95 AQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQF-SPETRFYQASTSEMFGLIQAERQDENTPFYP---RSPYGVAKLYGH  170 (335)
T ss_dssp             SCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTSEEEEEEEGGGGCSCSSSSBCTTSCCCC---CSHHHHHHHHHH
T ss_pred             cccchhhhhhChHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEeCHHHhCCCCCCCCCcccCCCC---CChhHHHHHHHH
Confidence            97442  24567788999999999999999998 55 8999999999999876656667665443   588999999999


Q ss_pred             HHHHHHhh-cCCCEEEEecCceecCCCCCc--hhHHHHHHHHHHcCCCC-ccccCCCCceeeeeHHHHHHHHHHHhhcCC
Q 019878          151 KIALQAAS-EGLPIVPVYPGVIYGPGKLTT--GNLVAKLMIERFNGRLP-GYIGYGNDRFSFCHVDDVVDGHIAAMEKGR  226 (334)
Q Consensus       151 ~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~  226 (334)
                      .+++.+.+ .+++++++||+++|||+....  ...+..++.....+..+ ..++++++.++|+|++|+|+++..+++++.
T Consensus       171 ~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~  250 (335)
T 1rpn_A          171 WITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK  250 (335)
T ss_dssp             HHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS
T ss_pred             HHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcCC
Confidence            99998875 599999999999999975321  23355566666667644 356888999999999999999999998765


Q ss_pred             CCCeEEec-CCCCCHHHHHHHHHHHhCCCCCc-ccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHH
Q 019878          227 SGERYLLT-GENASFMQIFDMAAVITGTSRPR-FCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKA  304 (334)
Q Consensus       227 ~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~  304 (334)
                       +++||++ ++.+|+.|+++.+.+.+|.+.+. ..++.                    ....+    .......+|++|+
T Consensus       251 -~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~--------------------~~~~~----~~~~~~~~d~~k~  305 (335)
T 1rpn_A          251 -ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDP--------------------AFFRP----AEVDVLLGNPAKA  305 (335)
T ss_dssp             -CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECG--------------------GGCCS----SCCCBCCBCTHHH
T ss_pred             -CCEEEEeCCCCccHHHHHHHHHHHhCCCccccccccc--------------------cccCC----CcchhhcCCHHHH
Confidence             4799996 57799999999999999886321 11110                    00000    0112345799999


Q ss_pred             HHhcCCCCC-CHHHHHHHHHHHHHhc
Q 019878          305 KTELGYNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       305 ~~~lG~~p~-~~~e~i~~~~~~~~~~  329 (334)
                      +++|||+|+ +++++|+++++|++++
T Consensus       306 ~~~lG~~p~~~l~e~l~~~~~~~~~~  331 (335)
T 1rpn_A          306 QRVLGWKPRTSLDELIRMMVEADLRR  331 (335)
T ss_dssp             HHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             HHhcCCCcCCCHHHHHHHHHHHHHHh
Confidence            999999999 9999999999999764

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=2.2e-45  Score=329.08  Aligned_cols=297  Identities=23%  Similarity=0.333  Sum_probs=239.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC--CCeEEEEEcCCCCC--CCCCC--CCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ--GHSVRALVRRTSDI--SGLPS--EGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~--g~~V~~~~r~~~~~--~~~~~--~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |+|||||||||||++|++.|+++  |++|++++|+....  ..+..  .++++++.+|++|.+.+.++++++|+|||+||
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~   84 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYAA   84 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECCS
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECCc
Confidence            47999999999999999999998  89999999975321  11111  13789999999999999999999999999999


Q ss_pred             ccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCC------------ccCCCCCccccccccC
Q 019878           75 LVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG------------YIADENQVHEEKYFCT  140 (334)
Q Consensus        75 ~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~------------~~~~e~~~~~~~~~~~  140 (334)
                      ....  +..++...+++|+.++.+++++|.+. ++ +||++||.++||....            .+.+|+++..   +.+
T Consensus        85 ~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~---~~~  159 (348)
T 1oc2_A           85 ESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-DI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYN---PSS  159 (348)
T ss_dssp             CCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCC---CCS
T ss_pred             ccCccchhhCHHHHHHHHHHHHHHHHHHHHHh-CC-eEEEecccceeCCCcccccccccccccCCCcCCCCCCC---CCC
Confidence            7532  22456778999999999999999998 56 9999999999986532            3455554433   358


Q ss_pred             hHHHHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHH
Q 019878          141 QYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHI  219 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  219 (334)
                      .|+.+|.++|.+++.+.. .|++++++||+.+|||+... .+++..++.....+....+++++++.++|+|++|+|+++.
T Consensus       160 ~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  238 (348)
T 1oc2_A          160 PYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHI-EKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVW  238 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCT-TSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCc-cchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHH
Confidence            999999999999998764 59999999999999998642 3456666777777877777788899999999999999999


Q ss_pred             HHhhcCCCCCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccce
Q 019878          220 AAMEKGRSGERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWA  298 (334)
Q Consensus       220 ~~~~~~~~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (334)
                      .+++++..|++||++ ++.+|+.|+++.+.+.+|.+.+....                  ....+.        ....+.
T Consensus       239 ~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~------------------~~~~~~--------~~~~~~  292 (348)
T 1oc2_A          239 AILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDH------------------VTDRAG--------HDLRYA  292 (348)
T ss_dssp             HHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEE------------------ECCCTT--------CCCBCC
T ss_pred             HHhhCCCCCCeEEeCCCCCCCHHHHHHHHHHHhCCCcccccc------------------CCCCCC--------cccccc
Confidence            999877778999997 57799999999999999987543211                  001110        012345


Q ss_pred             echHHHHHhcCCCCC-C-HHHHHHHHHHHHHhc
Q 019878          299 YSCVKAKTELGYNPR-S-LKEGLQEVLPWLRSS  329 (334)
Q Consensus       299 ~d~~k~~~~lG~~p~-~-~~e~i~~~~~~~~~~  329 (334)
                      +|++|++++|||+|+ + ++++|+++++|++++
T Consensus       293 ~d~~k~~~~lG~~p~~~~~~~~l~~~~~~~~~~  325 (348)
T 1oc2_A          293 IDASKLRDELGWTPQFTDFSEGLEETIQWYTDN  325 (348)
T ss_dssp             BCCHHHHHHHCCCCSCCCHHHHHHHHHHHHHHT
T ss_pred             cCHHHHHHHcCCCCCCCcHHHHHHHHHHHHHHh
Confidence            799999999999999 7 999999999999875

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=100.00  E-value=5.8e-46  Score=329.02  Aligned_cols=286  Identities=21%  Similarity=0.296  Sum_probs=235.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC----CCCCCC---CCCeEEEEcCCCChhhHHHHhcCCCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD----ISGLPS---EGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~----~~~~~~---~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a   73 (334)
                      |+|||||||||||++|++.|+++|++|++++|+...    ...+..   ..+++++.+|+.          ++|+|||+|
T Consensus         8 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------~~d~vi~~a   77 (321)
T 3vps_A            8 HRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------DVRLVYHLA   77 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------TEEEEEECC
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------cCCEEEECC
Confidence            579999999999999999999999999999998762    222211   124555555544          899999999


Q ss_pred             cccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHH
Q 019878           74 ALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADK  151 (334)
Q Consensus        74 ~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~  151 (334)
                      +....  +..++...++ |+.++.+++++|++. ++++|||+||.++|+.....+.+|+.+..+   .+.|+.+|.++|+
T Consensus        78 ~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~-~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p---~~~Y~~sK~~~E~  152 (321)
T 3vps_A           78 SHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSV-GVPKVVVGSTCEVYGQADTLPTPEDSPLSP---RSPYAASKVGLEM  152 (321)
T ss_dssp             CCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSCSSSSBCTTSCCCC---CSHHHHHHHHHHH
T ss_pred             ccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHc-CCCeEEEecCHHHhCCCCCCCCCCCCCCCC---CChhHHHHHHHHH
Confidence            97542  3456667778 999999999999998 689999999999999887777777766554   5899999999999


Q ss_pred             HHHHHhh-cCC-CEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCCCC
Q 019878          152 IALQAAS-EGL-PIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGE  229 (334)
Q Consensus       152 ~~~~~~~-~g~-~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g~  229 (334)
                      +++.+.+ +|+ +++++||+++|||+... ..++..++.....+....+++++++.++|+|++|+|+++..++.++..| 
T Consensus       153 ~~~~~~~~~~~~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~g-  230 (321)
T 3vps_A          153 VAGAHQRASVAPEVGIVRFFNVYGPGERP-DALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLPS-  230 (321)
T ss_dssp             HHHHHHHSSSSCEEEEEEECEEECTTCCT-TSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCCS-
T ss_pred             HHHHHHHHcCCCceEEEEeccccCcCCCC-CChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCCC-
Confidence            9999875 589 99999999999998754 4566777777777877778888999999999999999999999988777 


Q ss_pred             eEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhc
Q 019878          230 RYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTEL  308 (334)
Q Consensus       230 ~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l  308 (334)
                      +||++ ++.+|+.|+++.+. .+|.+.+....|.+                   +        .......+|++|++++|
T Consensus       231 ~~~i~~~~~~s~~e~~~~i~-~~g~~~~~~~~~~~-------------------~--------~~~~~~~~d~~k~~~~l  282 (321)
T 3vps_A          231 VVNFGSGQSLSVNDVIRILQ-ATSPAAEVARKQPR-------------------P--------NEITEFRADTALQTRQI  282 (321)
T ss_dssp             EEEESCSCCEEHHHHHHHHH-TTCTTCEEEEECCC-------------------T--------TCCSBCCBCCHHHHHHH
T ss_pred             eEEecCCCcccHHHHHHHHH-HhCCCCccccCCCC-------------------C--------CCcceeeccHHHHHHHh
Confidence            99997 67899999999999 99988766544310                   0        01234568999999999


Q ss_pred             CCCC-C-CHHHHHHHHHHHHHhcCC
Q 019878          309 GYNP-R-SLKEGLQEVLPWLRSSGM  331 (334)
Q Consensus       309 G~~p-~-~~~e~i~~~~~~~~~~~~  331 (334)
                      ||+| + +++++|+++++||++++.
T Consensus       283 G~~p~~~~~~~~l~~~~~~~~~~~~  307 (321)
T 3vps_A          283 GERSGGIGIEEGIRLTLEWWQSRDL  307 (321)
T ss_dssp             CCCSCCCCHHHHHHHHHHHHHTSCT
T ss_pred             CCCCCcCCHHHHHHHHHHHHHhCCC
Confidence            9999 6 999999999999988763

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=100.00  E-value=2.8e-45  Score=328.33  Aligned_cols=299  Identities=20%  Similarity=0.258  Sum_probs=235.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC------CCC----CC--CCCCeEEEEcCCCChhhHHHHhc--CC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD------ISG----LP--SEGALELVYGDVTDYRSLVDACF--GC   66 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~------~~~----~~--~~~~v~~~~~Dl~d~~~~~~~~~--~~   66 (334)
                      |+|||||||||||++|++.|+++|++|++++|+...      ...    +.  ...+++++.+|++|.+++.++++  ++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (348)
T 1ek6_A            3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSF   82 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcCC
Confidence            579999999999999999999999999999986543      100    00  01268999999999999999998  79


Q ss_pred             CEEEEeccccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHH
Q 019878           67 HVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (334)
Q Consensus        67 d~vih~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (334)
                      |+|||+|+....  +..++...+++|+.++.+++++|++. ++++||++||.++|+.....+.+|+.+..+  ..+.|+.
T Consensus        83 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p--~~~~Y~~  159 (348)
T 1ek6_A           83 MAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVFSSSATVYGNPQYLPLDEAHPTGG--CTNPYGK  159 (348)
T ss_dssp             EEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGGCSCSSSSBCTTSCCCC--CSSHHHH
T ss_pred             CEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHh-CCCEEEEECcHHHhCCCCCCCcCCCCCCCC--CCCchHH
Confidence            999999997432  23456778999999999999999987 689999999999999766666677655332  1488999


Q ss_pred             HHHHHHHHHHHHhhcC--CCEEEEecCceecCCC------CC---chhHHHHHHHHHH-cCCCCcccc------CCCCce
Q 019878          145 SKAVADKIALQAASEG--LPIVPVYPGVIYGPGK------LT---TGNLVAKLMIERF-NGRLPGYIG------YGNDRF  206 (334)
Q Consensus       145 sK~~~E~~~~~~~~~g--~~~~ilR~~~v~G~~~------~~---~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~  206 (334)
                      +|.++|.+++.+.+.+  ++++++||+++|||+.      ..   ..+++..++.... .+....+++      ++++.+
T Consensus       160 sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~  239 (348)
T 1ek6_A          160 SKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVR  239 (348)
T ss_dssp             HHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEE
T ss_pred             HHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEE
Confidence            9999999999987545  9999999999999842      11   1234544444444 344444444      678899


Q ss_pred             eeeeHHHHHHHHHHHhhcC--CCC-CeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCC
Q 019878          207 SFCHVDDVVDGHIAAMEKG--RSG-ERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKL  282 (334)
Q Consensus       207 ~~i~v~D~a~a~~~~~~~~--~~g-~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (334)
                      +|+|++|+|++++.+++++  ..+ ++||++ ++.+|+.|+++.+.+.+|.+.+....|.                   .
T Consensus       240 ~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-------------------~  300 (348)
T 1ek6_A          240 DYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVAR-------------------R  300 (348)
T ss_dssp             CEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECC-------------------C
T ss_pred             eeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCC-------------------C
Confidence            9999999999999999875  344 899996 5789999999999999998766543321                   0


Q ss_pred             CCCCHHHHHHhhccceechHHHHHhcCCCCC-CHHHHHHHHHHHHHhc
Q 019878          283 PLISYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       283 ~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~  329 (334)
                      +.        ......+|++|++++|||+|+ +++++++++++|++++
T Consensus       301 ~~--------~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~w~~~~  340 (348)
T 1ek6_A          301 EG--------DVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQN  340 (348)
T ss_dssp             TT--------CCSEECBCCHHHHHTTCCCCCCCHHHHHHHHHHHHHHC
T ss_pred             Cc--------cchhhccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhc
Confidence            00        012346799999999999998 9999999999999875

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=100.00  E-value=7.9e-46  Score=326.98  Aligned_cols=295  Identities=16%  Similarity=0.155  Sum_probs=231.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC--CCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc--CCCEEEEecccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ--GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALV   76 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vih~a~~~   76 (334)
                      |+|||||||||||++|++.|+++  |++|++++|+..... +.  .+++++.+|++|.+.+.++++  ++|+|||+|+..
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~--~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~   79 (312)
T 2yy7_A            3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VV--NSGPFEVVNALDFNQIEHLVEVHKITDIYLMAALL   79 (312)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HH--HSSCEEECCTTCHHHHHHHHHHTTCCEEEECCCCC
T ss_pred             ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-cc--CCCceEEecCCCHHHHHHHHhhcCCCEEEECCccC
Confidence            58999999999999999999998  899999999876421 11  257899999999999999998  899999999974


Q ss_pred             CC-CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCC-ccCCCCCccccccccChHHHHHHHHHHHHH
Q 019878           77 EP-WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG-YIADENQVHEEKYFCTQYERSKAVADKIAL  154 (334)
Q Consensus        77 ~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~-~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~  154 (334)
                      .. +..++...+++|+.++.+++++|++. ++++||++||.++|+.... .+.+|+.+..   +.+.|+.+|.++|.+++
T Consensus        80 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~---~~~~Y~~sK~~~e~~~~  155 (312)
T 2yy7_A           80 SATAEKNPAFAWDLNMNSLFHVLNLAKAK-KIKKIFWPSSIAVFGPTTPKENTPQYTIME---PSTVYGISKQAGERWCE  155 (312)
T ss_dssp             HHHHHHCHHHHHHHHHHHHHHHHHHHHTT-SCSEEECCEEGGGCCTTSCSSSBCSSCBCC---CCSHHHHHHHHHHHHHH
T ss_pred             CCchhhChHHHHHHHHHHHHHHHHHHHHc-CCCEEEEeccHHHhCCCCCCCCccccCcCC---CCchhHHHHHHHHHHHH
Confidence            32 22456778999999999999999997 6899999999999987542 3455554433   35899999999999999


Q ss_pred             HHhh-cCCCEEEEecCceecCCCCCc---hhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCC---
Q 019878          155 QAAS-EGLPIVPVYPGVIYGPGKLTT---GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRS---  227 (334)
Q Consensus       155 ~~~~-~g~~~~ilR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~---  227 (334)
                      .+.+ +|++++++||+++||++..+.   .+.+...+.+.+.++....++++++.++|+|++|+|+++..+++++..   
T Consensus       156 ~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~  235 (312)
T 2yy7_A          156 YYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVEKIK  235 (312)
T ss_dssp             HHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGGGCC
T ss_pred             HHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCcccccc
Confidence            8764 599999999999999754221   123444455555555566677888999999999999999999987642   


Q ss_pred             -CCeEEecCCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHH
Q 019878          228 -GERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKT  306 (334)
Q Consensus       228 -g~~~~i~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~  306 (334)
                       +++||++++.+|+.|+++.+.+.+|. .+....|.                       ..... .......+|++|+++
T Consensus       236 ~~~~~ni~~~~~s~~e~~~~i~~~~~~-~~i~~~~~-----------------------~~~~~-~~~~~~~~d~~k~~~  290 (312)
T 2yy7_A          236 IHSSYNLAAMSFTPTEIANEIKKHIPE-FTITYEPD-----------------------FRQKI-ADSWPASIDDSQARE  290 (312)
T ss_dssp             CSSCEECCSEEECHHHHHHHHHTTCTT-CEEEECCC-----------------------THHHH-HTTSCSSBCCHHHHH
T ss_pred             cCceEEeCCCccCHHHHHHHHHHHCCC-CceEeccC-----------------------ccccc-cccccccCCHHHHHH
Confidence             48999988789999999999998873 11111110                       00110 011234679999999


Q ss_pred             hcCCCCC-CHHHHHHHHHHHHH
Q 019878          307 ELGYNPR-SLKEGLQEVLPWLR  327 (334)
Q Consensus       307 ~lG~~p~-~~~e~i~~~~~~~~  327 (334)
                      +|||+|+ +++++|+++++||+
T Consensus       291 ~lG~~p~~~l~~~l~~~~~~~k  312 (312)
T 2yy7_A          291 DWDWKHTFDLESMTKDMIEHLS  312 (312)
T ss_dssp             HHCCCCCCCHHHHHHHHHHHHC
T ss_pred             HcCCCCCCCHHHHHHHHHHHhC
Confidence            9999999 99999999999984

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=100.00  E-value=1.8e-44  Score=324.67  Aligned_cols=306  Identities=18%  Similarity=0.308  Sum_probs=239.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC-CCeEEEEEcCCC--CCC---CCCCCCCeEEEEcCCCChhhHHHHhc--CCCEEEEe
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTS--DIS---GLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHT   72 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~-g~~V~~~~r~~~--~~~---~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vih~   72 (334)
                      |||||||||||||++|++.|+++ |++|++++|+..  ...   .+....+++++.+|++|.+.+.++++  ++|+|||+
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence            89999999999999999999998 799999999752  111   12222478999999999999999998  89999999


Q ss_pred             ccccCC--CCCCcccchhhhhHHHHHHHHHHHhcC-CCc-------EEEEecccceeccCCC--c--------cCCCCCc
Q 019878           73 AALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETK-TVE-------KIIYTSSFFALGSTDG--Y--------IADENQV  132 (334)
Q Consensus        73 a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~-------~~v~~Ss~~v~~~~~~--~--------~~~e~~~  132 (334)
                      ||....  +..++..++++|+.++.+++++|.+.. +++       +||++||.++||....  .        +.+|+.+
T Consensus        81 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~~  160 (361)
T 1kew_A           81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA  160 (361)
T ss_dssp             CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred             CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCCC
Confidence            997532  234667889999999999999999861 355       9999999999986542  1        4455544


Q ss_pred             cccccccChHHHHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeH
Q 019878          133 HEEKYFCTQYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHV  211 (334)
Q Consensus       133 ~~~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  211 (334)
                      ..   +.+.|+.+|.++|.+++.+.. .|++++++||+.+||++... ..++..++.....+....+++++++.++|+|+
T Consensus       161 ~~---~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  236 (361)
T 1kew_A          161 YA---PSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFP-EKLIPLVILNALEGKPLPIYGKGDQIRDWLYV  236 (361)
T ss_dssp             CC---CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCT-TSHHHHHHHHHHHTCCEEEETTSCCEEEEEEH
T ss_pred             CC---CCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCc-ccHHHHHHHHHHcCCCceEcCCCceeEeeEEH
Confidence            33   358999999999999999765 59999999999999998642 34556666667777776677888899999999


Q ss_pred             HHHHHHHHHHhhcCCCCCeEEecC-CCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHH
Q 019878          212 DDVVDGHIAAMEKGRSGERYLLTG-ENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTV  290 (334)
Q Consensus       212 ~D~a~a~~~~~~~~~~g~~~~i~g-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (334)
                      +|+|++++.+++++..|++||+++ +.+|+.|+++.+.+.+|.+.+... |...         .. ......+.      
T Consensus       237 ~Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~-p~~~---------~~-~~~~~~~~------  299 (361)
T 1kew_A          237 EDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKAT-SYRE---------QI-TYVADRPG------  299 (361)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSS-CGGG---------GE-EEECCCTT------
T ss_pred             HHHHHHHHHHHhCCCCCCEEEecCCCeeeHHHHHHHHHHHhCCcCcccc-cccc---------ce-eecCCCCc------
Confidence            999999999998777789999975 679999999999999987644321 1000         00 00000000      


Q ss_pred             HHhhccceechHHHHHhcCCCCC-CHHHHHHHHHHHHHhc
Q 019878          291 HVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       291 ~~~~~~~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~  329 (334)
                        ....+.+|++|++++|||+|+ +++++|+++++|++++
T Consensus       300 --~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~  337 (361)
T 1kew_A          300 --HDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLAN  337 (361)
T ss_dssp             --CCCBCCBCCHHHHHHHCCCCSCCHHHHHHHHHHHHHHC
T ss_pred             --ccceeecCHHHHHHHhCCCCccCHHHHHHHHHHHHHhc
Confidence              012446899999999999998 9999999999999765

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-45  Score=328.91  Aligned_cols=299  Identities=23%  Similarity=0.333  Sum_probs=235.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC-----CCCCCCCeEEEEcCCCChhhHHHHhcC--CCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-----GLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vih~a   73 (334)
                      |+|||||||||||++|++.|+++|++|++++|......     .+...++++++.+|++|.+.+.+++++  +|+|||+|
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   81 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA   81 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEECC
Confidence            57999999999999999999999999999998542110     111113589999999999999999988  99999999


Q ss_pred             cccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCCc-EEEEecccceeccCCCcc----------------CCCCCccc
Q 019878           74 ALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVE-KIIYTSSFFALGSTDGYI----------------ADENQVHE  134 (334)
Q Consensus        74 ~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~Ss~~v~~~~~~~~----------------~~e~~~~~  134 (334)
                      |....  +..++...+++|+.++.+++++|++. +++ +||++||.++|+.....+                .+|+.+..
T Consensus        82 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~  160 (347)
T 1orr_A           82 GQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-NSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLD  160 (347)
T ss_dssp             CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCC
T ss_pred             cccChhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCCC
Confidence            97432  22356778999999999999999998 565 999999999998654332                22222222


Q ss_pred             cccccChHHHHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCc--hhHHHHHHHHHHcCC-----CCccccCCCCce
Q 019878          135 EKYFCTQYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTT--GNLVAKLMIERFNGR-----LPGYIGYGNDRF  206 (334)
Q Consensus       135 ~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~--~~~~~~~~~~~~~~~-----~~~~~~~~~~~~  206 (334)
                         +.+.|+.+|.++|.+++.+.. .|++++++||+.+||++....  .+.+..++.+...+.     +...++++++.+
T Consensus       161 ---~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~  237 (347)
T 1orr_A          161 ---FHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVR  237 (347)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEE
T ss_pred             ---CCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceE
Confidence               357899999999999999764 599999999999999975432  234555665555555     455678899999


Q ss_pred             eeeeHHHHHHHHHHHhhc--CCCCCeEEecC-C--CCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCC
Q 019878          207 SFCHVDDVVDGHIAAMEK--GRSGERYLLTG-E--NASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGK  281 (334)
Q Consensus       207 ~~i~v~D~a~a~~~~~~~--~~~g~~~~i~g-~--~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (334)
                      +|+|++|+|++++.++++  ...|++||+++ +  .+|+.|+++.+.+.+|.+.+....|.                   
T Consensus       238 ~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-------------------  298 (347)
T 1orr_A          238 DVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPV-------------------  298 (347)
T ss_dssp             ECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECC-------------------
T ss_pred             eeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCceeCCC-------------------
Confidence            999999999999999985  23688999975 4  48999999999999998876544331                   


Q ss_pred             CCCCCHHHHHHhhccceechHHHHHhcCCCCC-CHHHHHHHHHHHHHhcC
Q 019878          282 LPLISYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSSG  330 (334)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~~  330 (334)
                      .+ .       ......+|++|++++|||+|+ +++++|+++++|++++.
T Consensus       299 ~~-~-------~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~  340 (347)
T 1orr_A          299 RE-S-------DQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSSIL  340 (347)
T ss_dssp             CS-S-------CCSEECBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHC-
T ss_pred             CC-C-------CcceeecCHHHHHHHHCCCccCCHHHHHHHHHHHHHHHH
Confidence            00 0       012345799999999999998 99999999999998864

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=100.00  E-value=3.6e-45  Score=324.04  Aligned_cols=286  Identities=19%  Similarity=0.221  Sum_probs=229.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc--CCCEEEEeccccCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVEP   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vih~a~~~~~   78 (334)
                      |+|||||||||||++|++.|+++|++|++++|+.               .+|+.|.+.+.++++  ++|+|||+|+....
T Consensus         4 ~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~---------------~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~   68 (321)
T 1e6u_A            4 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------ELNLLDSRAVHDFFASERIDQVYLAAAKVGG   68 (321)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------TCCTTCHHHHHHHHHHHCCSEEEECCCCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc---------------cCCccCHHHHHHHHHhcCCCEEEEcCeecCC
Confidence            5799999999999999999999999999988763               269999999999998  89999999997542


Q ss_pred             ---CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccc-cccc-cChHHHHHHHHHHHH
Q 019878           79 ---WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHE-EKYF-CTQYERSKAVADKIA  153 (334)
Q Consensus        79 ---~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~-~~~~-~~~Y~~sK~~~E~~~  153 (334)
                         +..++..++++|+.++.+++++|++. ++++||++||.++|+.....+.+|+++.. +..+ .+.|+.+|.++|+++
T Consensus        69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~  147 (321)
T 1e6u_A           69 IVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLC  147 (321)
T ss_dssp             HHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHH
T ss_pred             cchhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHHHHHHHH
Confidence               23456778899999999999999997 68999999999999976655666664211 1112 358999999999999


Q ss_pred             HHHhh-cCCCEEEEecCceecCCCCCc---hhHHHHHHHHHHc----C-CCCccccCCCCceeeeeHHHHHHHHHHHhhc
Q 019878          154 LQAAS-EGLPIVPVYPGVIYGPGKLTT---GNLVAKLMIERFN----G-RLPGYIGYGNDRFSFCHVDDVVDGHIAAMEK  224 (334)
Q Consensus       154 ~~~~~-~g~~~~ilR~~~v~G~~~~~~---~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~  224 (334)
                      +.+.+ .|++++++||+++|||+....   .+++..++.....    | ....+++++++.++|+|++|+|++++.++++
T Consensus       148 ~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~  227 (321)
T 1e6u_A          148 ESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMEL  227 (321)
T ss_dssp             HHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHS
T ss_pred             HHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHHHHhC
Confidence            98774 599999999999999986421   2455566555543    3 3455678889999999999999999999987


Q ss_pred             CCC---------CCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhh
Q 019878          225 GRS---------GERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLA  294 (334)
Q Consensus       225 ~~~---------g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (334)
                      +..         +++||++ ++.+|+.|+++.+.+.+|.+.+....|.                   .+.        ..
T Consensus       228 ~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-------------------~~~--------~~  280 (321)
T 1e6u_A          228 AHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDAS-------------------KPD--------GT  280 (321)
T ss_dssp             CHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETT-------------------SCC--------CC
T ss_pred             cccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCceEeCCC-------------------CCC--------Cc
Confidence            643         5899996 5789999999999999998765433221                   010        12


Q ss_pred             ccceechHHHHHhcCCCCC-CHHHHHHHHHHHHHhcC
Q 019878          295 HQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSSG  330 (334)
Q Consensus       295 ~~~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~~  330 (334)
                      ....+|++|+++ |||+|+ +++++|+++++|++++.
T Consensus       281 ~~~~~d~~k~~~-lG~~p~~~~~~~l~~~~~~~~~~~  316 (321)
T 1e6u_A          281 PRKLLDVTRLHQ-LGWYHEISLEAGLASTYQWFLENQ  316 (321)
T ss_dssp             SBCCBCCHHHHH-TTCCCCCCHHHHHHHHHHHHHHTC
T ss_pred             ccccCCHHHHHh-cCCccCCcHHHHHHHHHHHHHHHH
Confidence            345689999999 999998 99999999999998753

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=1.3e-44  Score=315.41  Aligned_cols=270  Identities=21%  Similarity=0.230  Sum_probs=222.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcC-CCEEEEeccccCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG-CHVIFHTAALVEPW   79 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-~d~vih~a~~~~~~   79 (334)
                      |+||||| +||||++|++.|+++|++|++++|+.++..     ++++++.+|++|.+.+.+++++ +|+|||+|+...  
T Consensus         4 ~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~~--   75 (286)
T 3gpi_A            4 SKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPMP-----AGVQTLIADVTRPDTLASIVHLRPEILVYCVAASE--   75 (286)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCCC-----TTCCEEECCTTCGGGCTTGGGGCCSEEEECHHHHH--
T ss_pred             CcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCccccc-----cCCceEEccCCChHHHHHhhcCCCCEEEEeCCCCC--
Confidence            5899999 699999999999999999999999977532     3799999999999999999987 999999998743  


Q ss_pred             CCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHhhc
Q 019878           80 LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE  159 (334)
Q Consensus        80 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~  159 (334)
                       .++..++++|+.++.+++++|++. ++++|||+||.++||.....+.+|+.+..+   .+.|+.+|.++|++ +.   .
T Consensus        76 -~~~~~~~~~n~~~~~~ll~a~~~~-~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p---~~~Y~~sK~~~E~~-~~---~  146 (286)
T 3gpi_A           76 -YSDEHYRLSYVEGLRNTLSALEGA-PLQHVFFVSSTGVYGQEVEEWLDEDTPPIA---KDFSGKRMLEAEAL-LA---A  146 (286)
T ss_dssp             -HC-----CCSHHHHHHHHHHTTTS-CCCEEEEEEEGGGCCCCCSSEECTTSCCCC---CSHHHHHHHHHHHH-GG---G
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHhhC-CCCEEEEEcccEEEcCCCCCCCCCCCCCCC---CChhhHHHHHHHHH-Hh---c
Confidence             456678899999999999999987 789999999999999887777777766544   58999999999999 65   3


Q ss_pred             CCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhc---CCCCCeEEec-C
Q 019878          160 GLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEK---GRSGERYLLT-G  235 (334)
Q Consensus       160 g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~---~~~g~~~~i~-g  235 (334)
                       ++++++||+++||++..   .    ++.....  . ...+.+++.++|+|++|+|+++..++++   ...+++||++ +
T Consensus       147 -~~~~ilR~~~v~G~~~~---~----~~~~~~~--~-~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~  215 (286)
T 3gpi_A          147 -YSSTILRFSGIYGPGRL---R----MIRQAQT--P-EQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDN  215 (286)
T ss_dssp             -SSEEEEEECEEEBTTBC---H----HHHHTTC--G-GGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECCS
T ss_pred             -CCeEEEecccccCCCch---h----HHHHHHh--c-ccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeCC
Confidence             99999999999999753   2    2223223  2 2347788999999999999999999998   4678999997 5


Q ss_pred             CCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhcCCCCC--
Q 019878          236 ENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPR--  313 (334)
Q Consensus       236 ~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~--  313 (334)
                      +.+|+.|+++.+.+.+|.+.+....+                              .......+|++|++ +|||+|+  
T Consensus       216 ~~~s~~e~~~~i~~~~g~~~~~~~~~------------------------------~~~~~~~~d~~k~~-~lG~~p~~~  264 (286)
T 3gpi_A          216 QPLPVHDLLRWLADRQGIAYPAGATP------------------------------PVQGNKKLSNARLL-ASGYQLIYP  264 (286)
T ss_dssp             CCEEHHHHHHHHHHHTTCCCCCSCCC------------------------------CBCSSCEECCHHHH-HTTCCCSSC
T ss_pred             CCCCHHHHHHHHHHHcCCCCCCCCCc------------------------------ccCCCeEeeHHHHH-HcCCCCcCC
Confidence            78999999999999999876653211                              11345568999998 8999999  


Q ss_pred             CHHHHHHHHHHHHHhc
Q 019878          314 SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       314 ~~~e~i~~~~~~~~~~  329 (334)
                      +++++|+++++|+..+
T Consensus       265 ~l~e~l~~~~~~~~~~  280 (286)
T 3gpi_A          265 DYVSGYGALLAAMREG  280 (286)
T ss_dssp             SHHHHHHHHHHHHTC-
T ss_pred             cHHHHHHHHHHHHhcc
Confidence            5999999999999764

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=100.00  E-value=4.1e-44  Score=320.21  Aligned_cols=294  Identities=21%  Similarity=0.320  Sum_probs=235.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC----CCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS----GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~   76 (334)
                      |+|||||||||||++|++.|+++|++|++++|+.....    .+....+++++.+|+.+..     +.++|+|||+|+..
T Consensus        28 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~~~~d~vih~A~~~  102 (343)
T 2b69_A           28 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL-----YIEVDQIYHLASPA  102 (343)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC-----CCCCSEEEECCSCC
T ss_pred             CEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChh-----hcCCCEEEECcccc
Confidence            67999999999999999999999999999999754221    1111246899999998853     56899999999975


Q ss_pred             CC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCcc--ccccccChHHHHHHHHHHH
Q 019878           77 EP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVH--EEKYFCTQYERSKAVADKI  152 (334)
Q Consensus        77 ~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~--~~~~~~~~Y~~sK~~~E~~  152 (334)
                      ..  +..++...+++|+.++.+++++|++. ++ +||++||.++|+.....+.+|+.+.  .+..+.+.|+.+|.++|.+
T Consensus       103 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~  180 (343)
T 2b69_A          103 SPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETM  180 (343)
T ss_dssp             SHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHH
T ss_pred             CchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CC-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHHHHH
Confidence            42  23566778899999999999999998 45 9999999999997765566665321  1223457899999999999


Q ss_pred             HHHHhh-cCCCEEEEecCceecCCCCCc-hhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCCCCe
Q 019878          153 ALQAAS-EGLPIVPVYPGVIYGPGKLTT-GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGER  230 (334)
Q Consensus       153 ~~~~~~-~g~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g~~  230 (334)
                      ++.+.+ .|++++++||+++|||+.... .+.+..++.....+....+++++++.++|+|++|+|++++.+++.+ .+++
T Consensus       181 ~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~-~~~~  259 (343)
T 2b69_A          181 CYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN-VSSP  259 (343)
T ss_dssp             HHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS-CCSC
T ss_pred             HHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcC-CCCe
Confidence            998764 699999999999999975422 3456667777777877777888899999999999999999999865 4679


Q ss_pred             EEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhcC
Q 019878          231 YLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELG  309 (334)
Q Consensus       231 ~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG  309 (334)
                      ||++ ++.+|+.|+++.+.+.+|.+.+....|.+                ..           ......+|++|++++||
T Consensus       260 ~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~----------------~~-----------~~~~~~~d~~k~~~~lG  312 (343)
T 2b69_A          260 VNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEA----------------QD-----------DPQKRKPDIKKAKLMLG  312 (343)
T ss_dssp             EEESCCCEEEHHHHHHHHHHHHTCCCCEEEECCC----------------TT-----------CCCCCCBCCHHHHHHHC
T ss_pred             EEecCCCCCcHHHHHHHHHHHhCCCCCceeCCCC----------------CC-----------CCceecCCHHHHHHHcC
Confidence            9997 57799999999999999988765444310                00           01234579999999999


Q ss_pred             CCCC-CHHHHHHHHHHHHHhc
Q 019878          310 YNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       310 ~~p~-~~~e~i~~~~~~~~~~  329 (334)
                      |+|+ +++++|+++++|++++
T Consensus       313 ~~p~~~l~e~l~~~~~~~~~~  333 (343)
T 2b69_A          313 WEPVVPLEEGLNKAIHYFRKE  333 (343)
T ss_dssp             CCCCSCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHH
Confidence            9998 9999999999999764

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=3.6e-44  Score=318.90  Aligned_cols=286  Identities=21%  Similarity=0.292  Sum_probs=230.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC-CCCCCCeEEEEcCCCChhhHHHHhc--CCCEEEEeccccC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-LPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVE   77 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vih~a~~~~   77 (334)
                      |+|||||||||||++|++.|+++|++|++++|+...... .....+++++.+|++|.+.+.++++  ++|+|||+||...
T Consensus        21 ~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~~~  100 (330)
T 2pzm_A           21 MRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAAAYK  100 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEECCccCC
Confidence            789999999999999999999999999999997543221 1111478999999999999999998  8999999999754


Q ss_pred             C-CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCc--cCCCCCccccccccChHHHHHHHHHHHHH
Q 019878           78 P-WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGY--IADENQVHEEKYFCTQYERSKAVADKIAL  154 (334)
Q Consensus        78 ~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~--~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~  154 (334)
                      . +..++.  +++|+.++.+++++|.+. ++++||++||.++|+.....  +.+|+.     .+.+.|+.+|.++|.+++
T Consensus       101 ~~~~~~~~--~~~N~~~~~~l~~a~~~~-~~~~iV~~SS~~~~~~~~~~~~~~~E~~-----~~~~~Y~~sK~~~e~~~~  172 (330)
T 2pzm_A          101 DPDDWAED--AATNVQGSINVAKAASKA-GVKRLLNFQTALCYGRPATVPIPIDSPT-----APFTSYGISKTAGEAFLM  172 (330)
T ss_dssp             CTTCHHHH--HHHHTHHHHHHHHHHHHH-TCSEEEEEEEGGGGCSCSSSSBCTTCCC-----CCCSHHHHHHHHHHHHHH
T ss_pred             CccccChh--HHHHHHHHHHHHHHHHHc-CCCEEEEecCHHHhCCCccCCCCcCCCC-----CCCChHHHHHHHHHHHHH
Confidence            3 222333  899999999999999987 68999999999999876443  555554     235789999999999998


Q ss_pred             HHhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHH-HHHHHhhcCCCCCeEEe
Q 019878          155 QAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVD-GHIAAMEKGRSGERYLL  233 (334)
Q Consensus       155 ~~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~-a~~~~~~~~~~g~~~~i  233 (334)
                      .+   +++++++||+++|||+.  ..+++..++.....+.  ..++++. .++|+|++|+|+ ++..++.++. |++||+
T Consensus       173 ~~---~~~~~~iR~~~v~gp~~--~~~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~~-g~~~~v  243 (330)
T 2pzm_A          173 MS---DVPVVSLRLANVTGPRL--AIGPIPTFYKRLKAGQ--KCFCSDT-VRDFLDMSDFLAIADLSLQEGRP-TGVFNV  243 (330)
T ss_dssp             TC---SSCEEEEEECEEECTTC--CSSHHHHHHHHHHTTC--CCCEESC-EECEEEHHHHHHHHHHHTSTTCC-CEEEEE
T ss_pred             Hc---CCCEEEEeeeeeECcCC--CCCHHHHHHHHHHcCC--EEeCCCC-EecceeHHHHHHHHHHHHhhcCC-CCEEEe
Confidence            75   89999999999999985  2345555555555555  4556666 899999999999 9999998766 899999


Q ss_pred             c-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHH-----HHh
Q 019878          234 T-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKA-----KTE  307 (334)
Q Consensus       234 ~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~-----~~~  307 (334)
                      + ++.+|+.|+++.+.+.+|.+ +....|.+                   +         ......+|++|+     ++ 
T Consensus       244 ~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~-------------------~---------~~~~~~~d~~k~~~~~l~~-  293 (330)
T 2pzm_A          244 STGEGHSIKEVFDVVLDYVGAT-LAEPVPVV-------------------A---------PGADDVPSVVLDPSKTETE-  293 (330)
T ss_dssp             SCSCCEEHHHHHHHHHHHHTCC-CSSCCCEE-------------------C---------CCTTSCSEECBCCHHHHHH-
T ss_pred             CCCCCCCHHHHHHHHHHHhCCC-CceeCCCC-------------------c---------chhhccCCHHHHhhchHHH-
Confidence            7 57899999999999999987 44333210                   0         112345678887     77 


Q ss_pred             cCCCCC-CHHHHHHHHHHHHHhcCCCC
Q 019878          308 LGYNPR-SLKEGLQEVLPWLRSSGMIK  333 (334)
Q Consensus       308 lG~~p~-~~~e~i~~~~~~~~~~~~~~  333 (334)
                      |||+|+ +++++|+++++|+++++++.
T Consensus       294 lG~~p~~~~~~~l~~~~~~~~~~~~~~  320 (330)
T 2pzm_A          294 FGWKAKVDFKDTITGQLAWYDKYGVTD  320 (330)
T ss_dssp             HCCCCCCCHHHHHHHHHHHHHHHCSCS
T ss_pred             cCCcccCCHHHHHHHHHHHHHhhCccc
Confidence            999998 99999999999999988763

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=100.00  E-value=4e-44  Score=318.93  Aligned_cols=289  Identities=18%  Similarity=0.189  Sum_probs=230.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC-CCCCCCCeEEEEcCCCChhhHHHHhcC--CCEEEEeccccC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-GLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAALVE   77 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vih~a~~~~   77 (334)
                      |+|||||||||||++|++.|+++|++|++++|+..... .+...++++++.+|++|.+.+.+++++  +|+|||+||...
T Consensus        22 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~~~  101 (333)
T 2q1w_A           22 KKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAASYK  101 (333)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCCCS
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECceecC
Confidence            68999999999999999999999999999999864321 122224789999999999999999987  999999999754


Q ss_pred             C-CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceec----cCCCccCCCCCcccccccc-ChHHHHHHHHHH
Q 019878           78 P-WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG----STDGYIADENQVHEEKYFC-TQYERSKAVADK  151 (334)
Q Consensus        78 ~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~----~~~~~~~~e~~~~~~~~~~-~~Y~~sK~~~E~  151 (334)
                      . +..++.  +++|+.++.+++++|.+. ++++||++||.++|+    .... +.+|++     .+. +.|+.+|.++|.
T Consensus       102 ~~~~~~~~--~~~N~~~~~~l~~a~~~~-~~~~iV~~SS~~~~g~~~~~~~~-~~~E~~-----~p~~~~Y~~sK~~~E~  172 (333)
T 2q1w_A          102 DPDDWYND--TLTNCVGGSNVVQAAKKN-NVGRFVYFQTALCYGVKPIQQPV-RLDHPR-----NPANSSYAISKSANED  172 (333)
T ss_dssp             CTTCHHHH--HHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGGCSCCCSSSB-CTTSCC-----CCTTCHHHHHHHHHHH
T ss_pred             CCccCChH--HHHHHHHHHHHHHHHHHh-CCCEEEEECcHHHhCCCcccCCC-CcCCCC-----CCCCCchHHHHHHHHH
Confidence            3 222333  899999999999999997 689999999999998    5444 555554     224 789999999999


Q ss_pred             HHHH-HhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCCCCe
Q 019878          152 IALQ-AASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGER  230 (334)
Q Consensus       152 ~~~~-~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g~~  230 (334)
                      +++. +.    +++++||+++|||+.  ..+++..++.....+.  .+++ +++.++|+|++|+|+++..++.++. +++
T Consensus       173 ~~~~s~~----~~~ilR~~~v~gp~~--~~~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~Dva~ai~~~~~~~~-g~~  242 (333)
T 2q1w_A          173 YLEYSGL----DFVTFRLANVVGPRN--VSGPLPIFFQRLSEGK--KCFV-TKARRDFVFVKDLARATVRAVDGVG-HGA  242 (333)
T ss_dssp             HHHHHTC----CEEEEEESEEESTTC--CSSHHHHHHHHHHTTC--CCEE-EECEECEEEHHHHHHHHHHHHTTCC-CEE
T ss_pred             HHHhhhC----CeEEEeeceEECcCC--cCcHHHHHHHHHHcCC--eeeC-CCceEeeEEHHHHHHHHHHHHhcCC-CCE
Confidence            9988 64    799999999999983  2345666666666665  3555 6788999999999999999998776 899


Q ss_pred             EEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhcC
Q 019878          231 YLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELG  309 (334)
Q Consensus       231 ~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG  309 (334)
                      ||++ ++.+|+.|+++.+.+.+|.+ +....|.+.                .  .     .........+|++|+++. |
T Consensus       243 ~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~----------------~--~-----~~~~~~~~~~d~~k~~~~-G  297 (333)
T 2q1w_A          243 YHFSSGTDVAIKELYDAVVEAMALP-SYPEPEIRE----------------L--G-----PDDAPSILLDPSRTIQDF-G  297 (333)
T ss_dssp             EECSCSCCEEHHHHHHHHHHHTTCS-SCCCCEEEE----------------C--C-----TTSCCCCCBCCHHHHHHH-C
T ss_pred             EEeCCCCCccHHHHHHHHHHHhCCC-CceeCCCCC----------------c--c-----cccccccccCCHHHHHhc-C
Confidence            9996 57899999999999999987 443333100                0  0     001124556899999987 9


Q ss_pred             CCCC-CHHHHHHHHHHHHHhcCCCC
Q 019878          310 YNPR-SLKEGLQEVLPWLRSSGMIK  333 (334)
Q Consensus       310 ~~p~-~~~e~i~~~~~~~~~~~~~~  333 (334)
                      |+|+ +++++|+++++||+++++++
T Consensus       298 ~~p~~~~~~~l~~~~~~~~~~~~~~  322 (333)
T 2q1w_A          298 KIEFTPLKETVAAAVAYFREYGVSG  322 (333)
T ss_dssp             CCCCCCHHHHHHHHHHHHHHHCC--
T ss_pred             CCcCCCHHHHHHHHHHHHHHHCCCC
Confidence            9998 99999999999999998774

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=100.00  E-value=3.6e-44  Score=319.90  Aligned_cols=300  Identities=23%  Similarity=0.299  Sum_probs=229.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC-CC---C--CCCeEEEEcCCCChhhHHHHhc--CCCEEEEe
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-LP---S--EGALELVYGDVTDYRSLVDACF--GCHVIFHT   72 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~---~--~~~v~~~~~Dl~d~~~~~~~~~--~~d~vih~   72 (334)
                      |+|||||||||||+++++.|+++|++|++++|....... +.   .  ..+++++.+|++|.+.+.++++  ++|+|||+
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~   80 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence            899999999999999999999999999999875432111 00   0  1257899999999999998886  49999999


Q ss_pred             ccccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHH
Q 019878           73 AALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD  150 (334)
Q Consensus        73 a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E  150 (334)
                      ||....  ...++...+++|+.++.+++++|++. ++++||++||.++|+.....+.+|+.+..+  +.+.|+.+|.++|
T Consensus        81 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~--~~~~Y~~sK~~~e  157 (338)
T 1udb_A           81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFSSSATVYGDNPKIPYVESFPTGT--PQSPYGKSKLMVE  157 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSCCSSSBCTTSCCCC--CSSHHHHHHHHHH
T ss_pred             CccCccccchhcHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEccHHHhCCCCCCCcCcccCCCC--CCChHHHHHHHHH
Confidence            996432  22355678899999999999999987 688999999999998766555666554322  2478999999999


Q ss_pred             HHHHHHhh-c-CCCEEEEecCceecCCC------CC---chhHHHHHHHHHH-cCCCCcccc------CCCCceeeeeHH
Q 019878          151 KIALQAAS-E-GLPIVPVYPGVIYGPGK------LT---TGNLVAKLMIERF-NGRLPGYIG------YGNDRFSFCHVD  212 (334)
Q Consensus       151 ~~~~~~~~-~-g~~~~ilR~~~v~G~~~------~~---~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~i~v~  212 (334)
                      ++++.+.. . |++++++||+++||+..      ..   ..+++..+..... .+....+++      ++++.++|+|++
T Consensus       158 ~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~  237 (338)
T 1udb_A          158 QILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVM  237 (338)
T ss_dssp             HHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHH
T ss_pred             HHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHH
Confidence            99998874 4 79999999999999842      11   1234444333333 222222332      567899999999


Q ss_pred             HHHHHHHHHhhcC--CC-CCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHH
Q 019878          213 DVVDGHIAAMEKG--RS-GERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYP  288 (334)
Q Consensus       213 D~a~a~~~~~~~~--~~-g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (334)
                      |+|++++.++++.  .. +++||++ ++.+|+.|+++.+.+.+|.+.+....|.                   .+ .   
T Consensus       238 Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-------------------~~-~---  294 (338)
T 1udb_A          238 DLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPR-------------------RE-G---  294 (338)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCCCEEEECC-------------------CT-T---
T ss_pred             HHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCCCcceeCCC-------------------CC-C---
Confidence            9999999998763  23 3799996 5789999999999999998766543321                   00 0   


Q ss_pred             HHHHhhccceechHHHHHhcCCCCC-CHHHHHHHHHHHHHhcC
Q 019878          289 TVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSSG  330 (334)
Q Consensus       289 ~~~~~~~~~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~~  330 (334)
                          ......+|++|++++|||+|+ +++++++++++|++++.
T Consensus       295 ----~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~w~~~~~  333 (338)
T 1udb_A          295 ----DLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHP  333 (338)
T ss_dssp             ----CCSBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred             ----chhhhhcCHHHHHHHcCCCcCCCHHHHHHHHHHHHHhcc
Confidence                012345799999999999999 99999999999998763

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=100.00  E-value=4e-44  Score=326.54  Aligned_cols=298  Identities=22%  Similarity=0.278  Sum_probs=233.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHH-hCCCeEEEEEcCCCCC---------CCC-------CC---CCC---eEEEEcCCCChh
Q 019878            1 MKILVSGASGYLGGRLCHALL-KQGHSVRALVRRTSDI---------SGL-------PS---EGA---LELVYGDVTDYR   57 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~-~~g~~V~~~~r~~~~~---------~~~-------~~---~~~---v~~~~~Dl~d~~   57 (334)
                      |+|||||||||||++|++.|+ ++|++|++++|+....         ..+       ..   ..+   ++++.+|++|.+
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   82 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHH
Confidence            899999999999999999999 9999999999976542         111       00   114   899999999999


Q ss_pred             hHHHHhc--C-CCEEEEeccccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCC-------Cc
Q 019878           58 SLVDACF--G-CHVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD-------GY  125 (334)
Q Consensus        58 ~~~~~~~--~-~d~vih~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~-------~~  125 (334)
                      .+.++++  + +|+|||+|+....  +..++..++++|+.++.+++++|++. ++++||++||.++|+...       ..
T Consensus        83 ~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-~~~~iv~~SS~~v~g~~~~~~~~~~~~  161 (397)
T 1gy8_A           83 FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCDKIIFSSSAAIFGNPTMGSVSTNAE  161 (397)
T ss_dssp             HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred             HHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHh-CCCEEEEECCHHHhCCCCccccccccc
Confidence            9999887  6 9999999997542  23456778999999999999999997 689999999999998765       45


Q ss_pred             cCCCCCccccccccChHHHHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCC--------chhHHHHHH----HHHHc
Q 019878          126 IADENQVHEEKYFCTQYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLT--------TGNLVAKLM----IERFN  192 (334)
Q Consensus       126 ~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~--------~~~~~~~~~----~~~~~  192 (334)
                      +.+|+++..   +.+.|+.+|.++|.+++.+.. .|++++++||+++|||+...        ..+++..++    .+...
T Consensus       162 ~~~E~~~~~---p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  238 (397)
T 1gy8_A          162 PIDINAKKS---PESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAP  238 (397)
T ss_dssp             CBCTTSCCB---CSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSC
T ss_pred             CcCccCCCC---CCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHh
Confidence            566665543   358999999999999999875 59999999999999996421        123444333    14444


Q ss_pred             CC------------CCcccc------CCCCceeeeeHHHHHHHHHHHhhcCC-C-----C---CeEEec-CCCCCHHHHH
Q 019878          193 GR------------LPGYIG------YGNDRFSFCHVDDVVDGHIAAMEKGR-S-----G---ERYLLT-GENASFMQIF  244 (334)
Q Consensus       193 ~~------------~~~~~~------~~~~~~~~i~v~D~a~a~~~~~~~~~-~-----g---~~~~i~-g~~~s~~e~~  244 (334)
                      +.            ...+++      ++++.++|+|++|+|++++.+++++. .     +   ++||++ ++.+|+.|++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~  318 (397)
T 1gy8_A          239 DQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVI  318 (397)
T ss_dssp             C-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHH
T ss_pred             cCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHHHH
Confidence            43            233444      67899999999999999999997642 2     3   799996 6789999999


Q ss_pred             HHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhcCCCCC--CHHHHHHHH
Q 019878          245 DMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPR--SLKEGLQEV  322 (334)
Q Consensus       245 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~--~~~e~i~~~  322 (334)
                      +.+.+.+|.+.+....|.                   .+.        ......+|++|++++|||+|+  +++++|+++
T Consensus       319 ~~i~~~~g~~~~~~~~~~-------------------~~~--------~~~~~~~d~~k~~~~lG~~p~~~~l~e~l~~~  371 (397)
T 1gy8_A          319 EVARKTTGHPIPVRECGR-------------------REG--------DPAYLVAASDKAREVLGWKPKYDTLEAIMETS  371 (397)
T ss_dssp             HHHHHHHCCCCCEEEECC-------------------CTT--------CCSEECBCCHHHHHHTCCCCSCCSHHHHHHHH
T ss_pred             HHHHHHhCCCCCeeeCCC-------------------CCC--------cccccccCHHHHHHHhCCCCCcCCHHHHHHHH
Confidence            999999998766543321                   000        012346799999999999998  999999999


Q ss_pred             HHHHHhc
Q 019878          323 LPWLRSS  329 (334)
Q Consensus       323 ~~~~~~~  329 (334)
                      ++|++++
T Consensus       372 ~~~~~~~  378 (397)
T 1gy8_A          372 WKFQRTH  378 (397)
T ss_dssp             HHHHHTC
T ss_pred             HHHHHhc
Confidence            9999876

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=7e-45  Score=320.57  Aligned_cols=294  Identities=20%  Similarity=0.258  Sum_probs=216.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcC-----CCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG-----CHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-----~d~vih~a~~   75 (334)
                      +|||||||||||++|++.|+++| ++|++++|++.... .....++. +.+|++|.+.+.+++++     +|+|||+|+.
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~~   78 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FVNLVDLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHEGAC   78 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG-GHHHHTSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEECCSC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch-hhhcCcce-eccccccHHHHHHHHhccccCCCcEEEECccc
Confidence            69999999999999999999999 99999999765321 00001233 67899999999998875     9999999998


Q ss_pred             cCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHH
Q 019878           76 VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ  155 (334)
Q Consensus        76 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~  155 (334)
                      ...+..++..++++|+.++.+++++|++. ++ +||++||.++|+.....+.+|+.+..+   .+.|+.+|.++|.+++.
T Consensus        79 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p---~~~Y~~sK~~~e~~~~~  153 (310)
T 1eq2_A           79 SSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATYGGRTSDFIESREYEKP---LNVYGYSKFLFDEYVRQ  153 (310)
T ss_dssp             CCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEGGGGTTCCSCBCSSGGGCCC---SSHHHHHHHHHHHHHHH
T ss_pred             ccCcccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeeHHHhCCCCCCCCCCCCCCCC---CChhHHHHHHHHHHHHH
Confidence            66555677789999999999999999998 67 999999999999876656666654433   58999999999999999


Q ss_pred             Hhh-cCCCEEEEecCceecCCCCCc---hhHHHHHHHHHHcCCCCccccCCCC-ceeeeeHHHHHHHHHHHhhcCCCCCe
Q 019878          156 AAS-EGLPIVPVYPGVIYGPGKLTT---GNLVAKLMIERFNGRLPGYIGYGND-RFSFCHVDDVVDGHIAAMEKGRSGER  230 (334)
Q Consensus       156 ~~~-~g~~~~ilR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~D~a~a~~~~~~~~~~g~~  230 (334)
                      +.+ .|++++++||+++|||+....   .+++..++.....+..+.+++++++ .++|+|++|+|+++..+++++. +++
T Consensus       154 ~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~~-~~~  232 (310)
T 1eq2_A          154 ILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-SGI  232 (310)
T ss_dssp             HGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC-CEE
T ss_pred             HHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcCC-CCe
Confidence            874 589999999999999976421   2456667777777777777788888 9999999999999999998876 889


Q ss_pred             EEec-CCCCCHHHHHHHHHHHhCCC-CCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhc
Q 019878          231 YLLT-GENASFMQIFDMAAVITGTS-RPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTEL  308 (334)
Q Consensus       231 ~~i~-g~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l  308 (334)
                      ||++ ++.+|+.|+++.+.+.+|.+ .+..+.|.+.                         .........+|++|+++ |
T Consensus       233 ~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~-l  286 (310)
T 1eq2_A          233 FNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKL-------------------------KGRYQAFTQADLTNLRA-A  286 (310)
T ss_dssp             EEESCSCCBCHHHHHHHC----------------------------------------------CCCSCCBCCHHHHH-T
T ss_pred             EEEeCCCccCHHHHHHHHHHHcCCCCceeCCCChhh-------------------------hcccccccccchHHHHh-c
Confidence            9996 57899999999999999876 2222222110                         00112334578999986 9


Q ss_pred             CC-CCC-CHHHHHHHHHHHHHhc
Q 019878          309 GY-NPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       309 G~-~p~-~~~e~i~~~~~~~~~~  329 (334)
                      || +|. +++++|+++++||+++
T Consensus       287 G~~~~~~~l~~~l~~~~~~~~~~  309 (310)
T 1eq2_A          287 GYDKPFKTVAEGVTEYMAWLNRD  309 (310)
T ss_dssp             TCCCCCCCHHHHHHHHHHHTC--
T ss_pred             CCCCCCCCHHHHHHHHHHHHHhc
Confidence            99 677 9999999999998653

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=100.00  E-value=3.3e-44  Score=322.59  Aligned_cols=292  Identities=20%  Similarity=0.256  Sum_probs=235.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCC--CCCCCCCCeEEEEcCCCChhhHHHHhc-----CCCEEEEe
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDI--SGLPSEGALELVYGDVTDYRSLVDACF-----GCHVIFHT   72 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~--~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----~~d~vih~   72 (334)
                      |+|||||||||||++|++.|+++| ++|++++|+....  ..+.   ++. +.+|++|.+.+.++++     ++|+|||+
T Consensus        47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~---~~~-~~~d~~~~~~~~~~~~~~~~~~~d~Vih~  122 (357)
T 2x6t_A           47 RMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV---DLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHE  122 (357)
T ss_dssp             -CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGTT---TSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhccc---Cce-EeeecCcHHHHHHHHhhcccCCCCEEEEC
Confidence            689999999999999999999999 9999999976542  1122   334 7789999999998887     59999999


Q ss_pred             ccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHH
Q 019878           73 AALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKI  152 (334)
Q Consensus        73 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~  152 (334)
                      |+....+..++...+++|+.++.+++++|.+. ++ +||++||.++|+.....+.+|+.+..+   .+.|+.+|.++|.+
T Consensus       123 A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~-~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p---~~~Y~~sK~~~E~~  197 (357)
T 2x6t_A          123 GACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATYGGRTSDFIESREYEKP---LNVFGYSKFLFDEY  197 (357)
T ss_dssp             CSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEGGGGCSCSSCCCSSGGGCCC---SSHHHHHHHHHHHH
T ss_pred             CcccCCccCCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEcchHHhCCCCCCCcCCcCCCCC---CChhHHHHHHHHHH
Confidence            99865555677789999999999999999998 67 999999999999776656666654433   58999999999999


Q ss_pred             HHHHhh-cCCCEEEEecCceecCCCCCc---hhHHHHHHHHHHcCCCCccccCCCC-ceeeeeHHHHHHHHHHHhhcCCC
Q 019878          153 ALQAAS-EGLPIVPVYPGVIYGPGKLTT---GNLVAKLMIERFNGRLPGYIGYGND-RFSFCHVDDVVDGHIAAMEKGRS  227 (334)
Q Consensus       153 ~~~~~~-~g~~~~ilR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~D~a~a~~~~~~~~~~  227 (334)
                      ++.+.+ .|++++++||+++|||+....   .+++..++.....+..+.+++++++ .++|+|++|+|+++..+++++. 
T Consensus       198 ~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~-  276 (357)
T 2x6t_A          198 VRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-  276 (357)
T ss_dssp             HHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHCC-
T ss_pred             HHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcCC-
Confidence            999875 589999999999999976421   2456667777777777777788888 9999999999999999998876 


Q ss_pred             CCeEEec-CCCCCHHHHHHHHHHHhCCC-CCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHH
Q 019878          228 GERYLLT-GENASFMQIFDMAAVITGTS-RPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAK  305 (334)
Q Consensus       228 g~~~~i~-g~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~  305 (334)
                      +++||++ ++.+|+.|+++.+.+.+|.+ ++..+.|.+.              .           ........+|++|++
T Consensus       277 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~--------------~-----------~~~~~~~~~~~~k~~  331 (357)
T 2x6t_A          277 SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKL--------------K-----------GRYQAFTQADLTNLR  331 (357)
T ss_dssp             CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEECCCGGG--------------T-----------TSCCSBCCCCCHHHH
T ss_pred             CCeEEecCCCcccHHHHHHHHHHHcCCCCceecCCCccc--------------c-----------cccccccccCHHHHH
Confidence            8899996 57899999999999999987 3333333210              0           001223457899998


Q ss_pred             HhcCC-CCC-CHHHHHHHHHHHHHh
Q 019878          306 TELGY-NPR-SLKEGLQEVLPWLRS  328 (334)
Q Consensus       306 ~~lG~-~p~-~~~e~i~~~~~~~~~  328 (334)
                      + ||| .|. +++++|+++++|+++
T Consensus       332 ~-lG~~~~~~~l~e~l~~~~~~~~~  355 (357)
T 2x6t_A          332 A-AGYDKPFKTVAEGVTEYMAWLNR  355 (357)
T ss_dssp             H-TTCCCCCCCHHHHHHHHHHHHC-
T ss_pred             H-cCCCCCCCCHHHHHHHHHHHHhh
Confidence            6 999 677 999999999999965

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=100.00  E-value=7.9e-45  Score=316.88  Aligned_cols=276  Identities=16%  Similarity=0.141  Sum_probs=227.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc--CCCEEEEeccccCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVEP   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vih~a~~~~~   78 (334)
                      |+|||||||||||+++++.|+++|++|++++|.                .+|+.|.+.+.++++  ++|+|||+|+....
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------~~D~~d~~~~~~~~~~~~~d~vi~~a~~~~~   69 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK----------------LLDITNISQVQQVVQEIRPHIIIHCAAYTKV   69 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT----------------TSCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc----------------ccCCCCHHHHHHHHHhcCCCEEEECCcccCh
Confidence            579999999999999999999999999999993                269999999999998  69999999997543


Q ss_pred             --CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHH
Q 019878           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (334)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~  156 (334)
                        +..++...+++|+.++.+++++|++. ++ ||||+||.++|+.....+.+|+++..+   .+.|+.+|.++|++++.+
T Consensus        70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p---~~~Y~~sK~~~E~~~~~~  144 (287)
T 3sc6_A           70 DQAEKERDLAYVINAIGARNVAVASQLV-GA-KLVYISTDYVFQGDRPEGYDEFHNPAP---INIYGASKYAGEQFVKEL  144 (287)
T ss_dssp             HHHTTCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGSCCCCSSCBCTTSCCCC---CSHHHHHHHHHHHHHHHH
T ss_pred             HHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchhhhcCCCCCCCCCCCCCCCC---CCHHHHHHHHHHHHHHHh
Confidence              33577889999999999999999998 45 799999999999887777777776544   589999999999999986


Q ss_pred             hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCCCCeEEec-C
Q 019878          157 ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLT-G  235 (334)
Q Consensus       157 ~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g~~~~i~-g  235 (334)
                      .   .+++++||+.+|||+..   +++..++.....+....+.+  ++.++|+|++|+|+++..+++++. +++||++ +
T Consensus       145 ~---~~~~ilR~~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~i~~~  215 (287)
T 3sc6_A          145 H---NKYFIVRTSWLYGKYGN---NFVKTMIRLGKEREEISVVA--DQIGSPTYVADLNVMINKLIHTSL-YGTYHVSNT  215 (287)
T ss_dssp             C---SSEEEEEECSEECSSSC---CHHHHHHHHHTTCSEEEEEC--SCEECCEEHHHHHHHHHHHHTSCC-CEEEECCCB
T ss_pred             C---CCcEEEeeeeecCCCCC---cHHHHHHHHHHcCCCeEeec--CcccCceEHHHHHHHHHHHHhCCC-CCeEEEcCC
Confidence            4   36899999999999753   45566666666666655554  489999999999999999999877 7799997 5


Q ss_pred             CCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhcCCCCC-C
Q 019878          236 ENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPR-S  314 (334)
Q Consensus       236 ~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~-~  314 (334)
                      +.+|+.|+++.+.+.+|.+.+...+|....              .... .       ......+|++|++ +|||+|. +
T Consensus       216 ~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~--------------~~~~-~-------~~~~~~~d~~k~~-~lg~~p~~~  272 (287)
T 3sc6_A          216 GSCSWFEFAKKIFSYANMKVNVLPVSTEEF--------------GAAA-A-------RPKYSIFQHNMLR-LNGFLQMPS  272 (287)
T ss_dssp             SCEEHHHHHHHHHHHHTCCCEEEEECHHHH--------------CCSS-C-------CCSBCCBCCHHHH-HTTCCCCCB
T ss_pred             CcccHHHHHHHHHHHcCCCcceeeeehhhc--------------Cccc-C-------CCCcccccHHHHH-hhCCCCCcc
Confidence            779999999999999999877766654321              1000 0       1123467999999 8999999 9


Q ss_pred             HHHHHHHHHHHHHhc
Q 019878          315 LKEGLQEVLPWLRSS  329 (334)
Q Consensus       315 ~~e~i~~~~~~~~~~  329 (334)
                      ++++|+++++|++++
T Consensus       273 ~~~~l~~~~~~~~~~  287 (287)
T 3sc6_A          273 WEEGLERFFIETKSH  287 (287)
T ss_dssp             HHHHHHHHHHHTC--
T ss_pred             HHHHHHHHHHHHhcC
Confidence            999999999998653

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=100.00  E-value=4.5e-45  Score=320.27  Aligned_cols=284  Identities=14%  Similarity=0.125  Sum_probs=227.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcC--CCEEEEeccccCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAALVEP   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vih~a~~~~~   78 (334)
                      |||||||||||||++|++.|+ +|++|++++|++.            ++.+|+.|.+.+.+++++  +|+|||+|+....
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~------------~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~   67 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK------------EFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAV   67 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS------------SSCCCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc------------cccccCCCHHHHHHHHHhcCCCEEEECcccCCH
Confidence            899999999999999999999 8999999999762            246899999999999986  9999999997542


Q ss_pred             --CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHH
Q 019878           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (334)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~  156 (334)
                        +..++...+++|+.++.+++++|++. ++ ||||+||.++|+.....+.+|+++..+   .+.|+.+|.++|++++.+
T Consensus        68 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p---~~~Y~~sK~~~E~~~~~~  142 (299)
T 1n2s_A           68 DKAESEPELAQLLNATSVEAIAKAANET-GA-WVVHYSTDYVFPGTGDIPWQETDATSP---LNVYGKTKLAGEKALQDN  142 (299)
T ss_dssp             HHHTTCHHHHHHHHTHHHHHHHHHHTTT-TC-EEEEEEEGGGSCCCTTCCBCTTSCCCC---SSHHHHHHHHHHHHHHHH
T ss_pred             hhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEecccEEeCCCCCCCCCCCCCCC---ccHHHHHHHHHHHHHHHh
Confidence              34567788999999999999999987 55 899999999999877666667665443   589999999999999986


Q ss_pred             hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcC--C--CCCeEE
Q 019878          157 ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG--R--SGERYL  232 (334)
Q Consensus       157 ~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~--~--~g~~~~  232 (334)
                      .   .+++++||+++||++..   +++..++.....+......+  ++.++|+|++|+|+++..+++++  .  .+++||
T Consensus       143 ~---~~~~ilRp~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~  214 (299)
T 1n2s_A          143 C---PKHLIFRTSWVYAGKGN---NFAKTMLRLAKERQTLSVIN--DQYGAPTGAELLADCTAHAIRVALNKPEVAGLYH  214 (299)
T ss_dssp             C---SSEEEEEECSEECSSSC---CHHHHHHHHHHHCSEEEEEC--SCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEE
T ss_pred             C---CCeEEEeeeeecCCCcC---cHHHHHHHHHhcCCCEEeec--CcccCCeeHHHHHHHHHHHHHHhccccccCceEE
Confidence            4   37999999999999753   35556666666676555554  48899999999999999999876  3  488999


Q ss_pred             ecC-CCCCHHHHHHHHHHHhCCCCC------cccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHH
Q 019878          233 LTG-ENASFMQIFDMAAVITGTSRP------RFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAK  305 (334)
Q Consensus       233 i~g-~~~s~~e~~~~i~~~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~  305 (334)
                      +++ +.+|+.|+++.+.+.+|.+.+      ....+..                 ..+...     .......+|++|++
T Consensus       215 i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~-----------------~~~~~~-----~~~~~~~~d~~k~~  272 (299)
T 1n2s_A          215 LVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTS-----------------AYPTPA-----SRPGNSRLNTEKFQ  272 (299)
T ss_dssp             CCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECST-----------------TSCCSS-----CCCSBCCBCCHHHH
T ss_pred             EeCCCCCCHHHHHHHHHHHhCCCccccccccccccccc-----------------cccCcC-----CCCCceeeeHHHHH
Confidence            974 789999999999999987632      1111100                 000000     01245578999999


Q ss_pred             HhcCCCCCCHHHHHHHHHHHHHhcCCC
Q 019878          306 TELGYNPRSLKEGLQEVLPWLRSSGMI  332 (334)
Q Consensus       306 ~~lG~~p~~~~e~i~~~~~~~~~~~~~  332 (334)
                      ++|||+|++++++|+++++||+++..+
T Consensus       273 ~~lG~~p~~~~~~l~~~~~~~~~~~~i  299 (299)
T 1n2s_A          273 RNFDLILPQWELGVKRMLTEMFTTTTI  299 (299)
T ss_dssp             HHHTCCCCBHHHHHHHHHHHHHSCCC-
T ss_pred             HhcCCCCCCHHHHHHHHHHHHHhcCCC
Confidence            999999999999999999999987653

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=100.00  E-value=1.4e-43  Score=313.39  Aligned_cols=294  Identities=17%  Similarity=0.172  Sum_probs=230.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhC--CCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc--CCCEEEEeccccC
Q 019878            2 KILVSGASGYLGGRLCHALLKQ--GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVE   77 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vih~a~~~~   77 (334)
                      ||||||||||||++|++.|+++  |++|++++|+.....      +++++.+|++|.+++.++++  ++|+|||+|+...
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~------~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~   74 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG------GIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGILS   74 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT------TCCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCH
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc------CceEEEecCCCHHHHHHHHhhcCCcEEEECCcccC
Confidence            6999999999999999999998  899999999865432      46889999999999999998  8999999999743


Q ss_pred             C-CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCC-CccCCCCCccccccccChHHHHHHHHHHHHHH
Q 019878           78 P-WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD-GYIADENQVHEEKYFCTQYERSKAVADKIALQ  155 (334)
Q Consensus        78 ~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~-~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~  155 (334)
                      . ...++...+++|+.++.+++++|++. ++++||++||.++|+... ..+.+|+.+..   +.+.|+.+|.++|.+++.
T Consensus        75 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~---p~~~Y~~sK~~~e~~~~~  150 (317)
T 3ajr_A           75 AKGEKDPALAYKVNMNGTYNILEAAKQH-RVEKVVIPSTIGVFGPETPKNKVPSITITR---PRTMFGVTKIAAELLGQY  150 (317)
T ss_dssp             HHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGCCTTSCSSSBCSSSCCC---CCSHHHHHHHHHHHHHHH
T ss_pred             CccccChHHHhhhhhHHHHHHHHHHHHc-CCCEEEEecCHHHhCCCCCCCCccccccCC---CCchHHHHHHHHHHHHHH
Confidence            2 22456678899999999999999997 689999999999998653 33445554433   358999999999999988


Q ss_pred             Hhh-cCCCEEEEecCceecCCCCCc---hhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC----C
Q 019878          156 AAS-EGLPIVPVYPGVIYGPGKLTT---GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR----S  227 (334)
Q Consensus       156 ~~~-~g~~~~ilR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~----~  227 (334)
                      +.+ +|++++++||+.+||+...+.   ...+...+.+.+.++....++++++.++|+|++|+|+++..+++++.    .
T Consensus       151 ~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~~~  230 (317)
T 3ajr_A          151 YYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKLVL  230 (317)
T ss_dssp             HHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGGCSS
T ss_pred             HHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCcccccc
Confidence            764 699999999999999753211   13344455555666666666778899999999999999999998754    3


Q ss_pred             CCeEEecCCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHh
Q 019878          228 GERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTE  307 (334)
Q Consensus       228 g~~~~i~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~  307 (334)
                      |++||++++.+|+.|+++.+.+.+|. .+....|..                       .... .......+|++|++++
T Consensus       231 g~~~~i~~~~~s~~e~~~~i~~~~~~-~~i~~~~~~-----------------------~~~~-~~~~~~~~d~~k~~~~  285 (317)
T 3ajr_A          231 RNGYNVTAYTFTPSELYSKIKERIPE-FEIEYKEDF-----------------------RDKI-AATWPESLDSSEASNE  285 (317)
T ss_dssp             CSCEECCSEEECHHHHHHHHHTTCCS-CCEEECCCH-----------------------HHHH-HTTSCSCBCCHHHHHH
T ss_pred             CceEecCCccccHHHHHHHHHHHCCc-ccccccccc-----------------------chhh-ccccccccCHHHHHHH
Confidence            58999988779999999999998873 222111110                       0000 0112235799999999


Q ss_pred             cCCCCC-CHHHHHHHHHHHHHhcC
Q 019878          308 LGYNPR-SLKEGLQEVLPWLRSSG  330 (334)
Q Consensus       308 lG~~p~-~~~e~i~~~~~~~~~~~  330 (334)
                      |||+|+ +++++++++++|++++.
T Consensus       286 lG~~p~~~~~~~l~~~~~~~~~~~  309 (317)
T 3ajr_A          286 WGFSIEYDLDRTIDDMIDHISEKL  309 (317)
T ss_dssp             HCCCCCCCHHHHHHHHHHHHHHHT
T ss_pred             cCCCCCCCHHHHHHHHHHHHHhhh
Confidence            999999 99999999999998754

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=100.00  E-value=1.4e-43  Score=319.15  Aligned_cols=320  Identities=17%  Similarity=0.204  Sum_probs=242.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC-----CeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcC---CCEEEEe
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG-----HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG---CHVIFHT   72 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~---~d~vih~   72 (334)
                      |+|||||||||||++|++.|+++|     ++|++++|++.... + ...+++++.+|++|.+.+.+++++   +|+|||+
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~   79 (364)
T 2v6g_A            2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-H-EDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYV   79 (364)
T ss_dssp             EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-C-CSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-c-ccCceEEEEeecCCHHHHHHHHhcCCCCCEEEEC
Confidence            789999999999999999999999     99999999876543 1 224789999999999999999988   9999999


Q ss_pred             ccccCCCCCCcccchhhhhHHHHHHHHHHHhcC-CCcEEE-------EecccceeccCC--CccCCCCCccccccccChH
Q 019878           73 AALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKII-------YTSSFFALGSTD--GYIADENQVHEEKYFCTQY  142 (334)
Q Consensus        73 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v-------~~Ss~~v~~~~~--~~~~~e~~~~~~~~~~~~Y  142 (334)
                      |+...   .++...+++|+.++.+++++|++.. ++++||       |+||.++||...  ..+.+|+.+..+  ..+.|
T Consensus        80 a~~~~---~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~--~~~~y  154 (364)
T 2v6g_A           80 TWANR---STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLK--YMNFY  154 (364)
T ss_dssp             CCCCC---SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCS--SCCHH
T ss_pred             CCCCc---chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccCCc--cchhh
Confidence            99753   4567789999999999999999862 588998       899999998752  345556654332  13567


Q ss_pred             HHHHHHHHHHHHHHhh-cC-CCEEEEecCceecCCCCCchh-HHHHHHHHHH---cCCCCccccCCC---CceeeeeHHH
Q 019878          143 ERSKAVADKIALQAAS-EG-LPIVPVYPGVIYGPGKLTTGN-LVAKLMIERF---NGRLPGYIGYGN---DRFSFCHVDD  213 (334)
Q Consensus       143 ~~sK~~~E~~~~~~~~-~g-~~~~ilR~~~v~G~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~---~~~~~i~v~D  213 (334)
                          ..+|+.++++.+ +| ++++++||+++|||+.....+ .+...+.+.+   .+.++.++++++   ...+++|++|
T Consensus       155 ----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~D  230 (364)
T 2v6g_A          155 ----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADL  230 (364)
T ss_dssp             ----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHH
T ss_pred             ----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHH
Confidence                458888888775 56 999999999999998653222 3333233333   566666677763   4478888899


Q ss_pred             HHHHHHHHhhcCC-CCCeEEec-CCCCCHHHHHHHHHHHhCCCCCcc--cccHHHHHHHHHHHHHHHHH---hCCCCCCC
Q 019878          214 VVDGHIAAMEKGR-SGERYLLT-GENASFMQIFDMAAVITGTSRPRF--CIPLWLIEAYGWILVFFSRI---TGKLPLIS  286 (334)
Q Consensus       214 ~a~a~~~~~~~~~-~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~  286 (334)
                      +|++++.+++++. .|++||++ ++.+|+.|+++.+.+.+|.+.+..  .+|.+++...+...+.+..+   .+..+. .
T Consensus       231 va~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~  309 (364)
T 2v6g_A          231 IAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKGKEPVWEEIVRENGLTPT-K  309 (364)
T ss_dssp             HHHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTTCCCCHHHHTTTCHHHHHHHHHHTTCCCC-C
T ss_pred             HHHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHhhhHHHHHHHHHHhCCCcc-c
Confidence            9999999998764 68899997 467999999999999999887665  67776666554422222221   221110 0


Q ss_pred             HHHH-------HHhhcc-ceechHHHHHhcCCCCC-CHHHHHHHHHHHHHhcCCCC
Q 019878          287 YPTV-------HVLAHQ-WAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSSGMIK  333 (334)
Q Consensus       287 ~~~~-------~~~~~~-~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~~~~~  333 (334)
                      ....       .....+ ..+|++|+++ |||+|. +++++++++++|++++++++
T Consensus       310 ~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~l~~~~~~~~~~g~lp  364 (364)
T 2v6g_A          310 LKDVGIWWFGDVILGNECFLDSMNKSKE-HGFLGFRNSKNAFISWIDKAKAYKIVP  364 (364)
T ss_dssp             HHHHCCHHHHHHHHTSCCCCBCCHHHHH-TTCCCCCCHHHHHHHHHHHHHHTTSCC
T ss_pred             cccccccchhhhccccchhhcchHHHHh-cCCCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            0010       011245 5789999997 999997 99999999999999999875

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=100.00  E-value=4.3e-44  Score=327.06  Aligned_cols=301  Identities=19%  Similarity=0.212  Sum_probs=234.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC----------CC-------CC-----CCCCeEEEEcCCCChhh
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI----------SG-------LP-----SEGALELVYGDVTDYRS   58 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~~-------~~-----~~~~v~~~~~Dl~d~~~   58 (334)
                      |+|||||||||||++|++.|+++|++|++++|.....          ..       +.     ...+++++.+|++|.+.
T Consensus        12 ~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~~~   91 (404)
T 1i24_A           12 SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEF   91 (404)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHH
T ss_pred             CeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCHHH
Confidence            6899999999999999999999999999998753210          00       00     01368999999999999


Q ss_pred             HHHHhcC--CCEEEEeccccCC--CCCCcc---cchhhhhHHHHHHHHHHHhcCCC-cEEEEecccceeccCCCccCCCC
Q 019878           59 LVDACFG--CHVIFHTAALVEP--WLPDPS---RFFAVNVEGLKNVVQAAKETKTV-EKIIYTSSFFALGSTDGYIADEN  130 (334)
Q Consensus        59 ~~~~~~~--~d~vih~a~~~~~--~~~~~~---~~~~~n~~~~~~l~~~~~~~~~~-~~~v~~Ss~~v~~~~~~~~~~e~  130 (334)
                      +.+++++  +|+|||+||....  ...++.   ..+++|+.++.+++++|++. ++ ++||++||.++||.... +.+|+
T Consensus        92 ~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~~~~V~~SS~~vyg~~~~-~~~E~  169 (404)
T 1i24_A           92 LAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF-GEECHLVKLGTMGEYGTPNI-DIEEG  169 (404)
T ss_dssp             HHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEECCGGGGCCCSS-CBCSS
T ss_pred             HHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHh-CCCcEEEEeCcHHHhCCCCC-CCCcc
Confidence            9999987  9999999997432  122332   37799999999999999998 55 59999999999987653 34443


Q ss_pred             Cc-----------cccccccChHHHHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCc----------------hhH
Q 019878          131 QV-----------HEEKYFCTQYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTT----------------GNL  182 (334)
Q Consensus       131 ~~-----------~~~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~----------------~~~  182 (334)
                      ..           ..+..+.+.|+.+|.++|.+++.+.+ .|++++++||++||||+....                .+.
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~  249 (404)
T 1i24_A          170 YITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTA  249 (404)
T ss_dssp             EEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCH
T ss_pred             ccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccchhhH
Confidence            11           01233468999999999999998764 599999999999999986321                245


Q ss_pred             HHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC-CC--CeEEecCCCCCHHHHHHHHHHH---hCCCCC
Q 019878          183 VAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR-SG--ERYLLTGENASFMQIFDMAAVI---TGTSRP  256 (334)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-~g--~~~~i~g~~~s~~e~~~~i~~~---~g~~~~  256 (334)
                      +..++.....+..+.+++++++.++|+|++|+|++++.+++++. .|  ++||++++.+|+.|+++.+.+.   +|.+.+
T Consensus       250 ~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~~~~s~~e~~~~i~~~~~~~g~~~~  329 (404)
T 1i24_A          250 LNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLDVK  329 (404)
T ss_dssp             HHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTTTCCCC
T ss_pred             HHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECCCCCcHHHHHHHHHHHHHhhCCCcc
Confidence            67777777788777778888999999999999999999998765 36  6999977779999999999998   787766


Q ss_pred             cccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhcCCCCC-CHHHHHHHHHHHHHhc
Q 019878          257 RFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~  329 (334)
                      ....|.+.                    .     ........+|++|++ +|||+|+ +++++++++++|+...
T Consensus       330 ~~~~p~~~--------------------~-----~~~~~~~~~d~~k~~-~LG~~p~~~~~~~l~~~~~~~~~~  377 (404)
T 1i24_A          330 KMTVPNPR--------------------V-----EAEEHYYNAKHTKLM-ELGLEPHYLSDSLLDSLLNFAVQF  377 (404)
T ss_dssp             EEEECCSS--------------------C-----SCSSCCCCBCCCHHH-HTTCCCCCCCHHHHHHHHHHHHHT
T ss_pred             ccccCccc--------------------C-----ccccceEecCHHHHH-HcCCCcCcCHHHHHHHHHHHHHhh
Confidence            54433210                    0     001123457999998 6999999 9999999999998653

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=9.6e-43  Score=314.68  Aligned_cols=323  Identities=17%  Similarity=0.161  Sum_probs=233.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC--CCCCC--------CCCeEEEEcCCCChhhHHHHhcC--CCE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI--SGLPS--------EGALELVYGDVTDYRSLVDACFG--CHV   68 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~--------~~~v~~~~~Dl~d~~~~~~~~~~--~d~   68 (334)
                      |+|||||||||||+++++.|+++|++|++++|+....  ..+..        ..+++++.+|++|.+++.+++++  +|+
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE   81 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCCE
Confidence            5799999999999999999999999999999986531  11111        13689999999999999998875  799


Q ss_pred             EEEeccccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCC---cEEEEecccceeccCCCccCCCCCccccccccChHH
Q 019878           69 IFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTV---EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (334)
Q Consensus        69 vih~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (334)
                      |||+||....  ...++...+++|+.++.+++++|.+. ++   ++||++||.++|+.....+.+|+.+..+   .+.|+
T Consensus        82 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~---~~~Y~  157 (372)
T 1db3_A           82 VYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL-GLEKKTRFYQASTSELYGLVQEIPQKETTPFYP---RSPYA  157 (372)
T ss_dssp             EEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCC---CSHHH
T ss_pred             EEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCCCcEEEEeCChhhhCCCCCCCCCccCCCCC---CChHH
Confidence            9999997443  33456678899999999999999997 56   7999999999999776556666655443   58999


Q ss_pred             HHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCc--hhHHHHHHHHHHcCCC-CccccCCCCceeeeeHHHHHHHHH
Q 019878          144 RSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTT--GNLVAKLMIERFNGRL-PGYIGYGNDRFSFCHVDDVVDGHI  219 (334)
Q Consensus       144 ~sK~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~D~a~a~~  219 (334)
                      .+|.++|.+++.+.. .|++++++|++.+|||+....  ...+..++.....+.. ...++++++.++|+|++|+|+++.
T Consensus       158 ~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~  237 (372)
T 1db3_A          158 VAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQW  237 (372)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHH
Confidence            999999999998875 599999999999999975321  2334555555566654 345688899999999999999999


Q ss_pred             HHhhcCCCCCeEEec-CCCCCHHHHHHHHHHHhCCCCCccc--ccHH-HHHHHHHHHHHHHHHhCCC-CCCCHHHH-HHh
Q 019878          220 AAMEKGRSGERYLLT-GENASFMQIFDMAAVITGTSRPRFC--IPLW-LIEAYGWILVFFSRITGKL-PLISYPTV-HVL  293 (334)
Q Consensus       220 ~~~~~~~~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~  293 (334)
                      .+++++. +++||++ ++.+|+.|+++.+.+.+|.+.+...  +|.| ++.... ..+......+.. ....+... ...
T Consensus       238 ~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  315 (372)
T 1db3_A          238 MMLQQEQ-PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVT-GHDAPGVKPGDVIIAVDPRYFRPAE  315 (372)
T ss_dssp             HTTSSSS-CCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEEC-SSSCTTCCTTCEEEEECGGGCCCCC
T ss_pred             HHHhcCC-CceEEEcCCCceeHHHHHHHHHHHhCCCcccccccccccccccccc-cccccccccccceeeccccccCCCc
Confidence            9998754 5799996 6789999999999999987644211  1110 000000 000000000000 00000000 001


Q ss_pred             hccceechHHHHHhcCCCCC-CHHHHHHHHHHHHHhc
Q 019878          294 AHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       294 ~~~~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~  329 (334)
                      .....+|++|++++|||+|+ +++++|+++++|++++
T Consensus       316 ~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  352 (372)
T 1db3_A          316 VETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEA  352 (372)
T ss_dssp             -CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             hhhhccCHHHHHHHhCCccccCHHHHHHHHHHHHHHh
Confidence            12345799999999999998 9999999999999764

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=100.00  E-value=1.4e-42  Score=310.39  Aligned_cols=314  Identities=17%  Similarity=0.157  Sum_probs=238.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC-----CCCCCCeEEEEcCCCChhhHHHHhcC--CCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-----LPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vih~a   73 (334)
                      |+|||||||||||++|++.|+++|++|++++|++.....     +....+++++.+|++|.+++.+++++  +|+|||+|
T Consensus         4 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   83 (345)
T 2z1m_A            4 KRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYNLA   83 (345)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEECC
Confidence            679999999999999999999999999999998765321     11113689999999999999999875  69999999


Q ss_pred             cccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCC-cEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHH
Q 019878           74 ALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTV-EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD  150 (334)
Q Consensus        74 ~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E  150 (334)
                      |....  +..++...+++|+.++.+++++|.+. ++ ++||++||.++||.....+.+|+.+..+   .+.|+.+|.++|
T Consensus        84 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~---~~~Y~~sK~~~e  159 (345)
T 2z1m_A           84 AQSFVGVSFEQPILTAEVDAIGVLRILEALRTV-KPDTKFYQASTSEMFGKVQEIPQTEKTPFYP---RSPYAVAKLFGH  159 (345)
T ss_dssp             CCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTCEEEEEEEGGGGCSCSSSSBCTTSCCCC---CSHHHHHHHHHH
T ss_pred             CCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEEechhhcCCCCCCCCCccCCCCC---CChhHHHHHHHH
Confidence            97432  24567788999999999999999987 56 8999999999999877666666655443   588999999999


Q ss_pred             HHHHHHhh-cCCCEEEEecCceecCCCCCc--hhHHHHHHHHHHcCCCC-ccccCCCCceeeeeHHHHHHHHHHHhhcCC
Q 019878          151 KIALQAAS-EGLPIVPVYPGVIYGPGKLTT--GNLVAKLMIERFNGRLP-GYIGYGNDRFSFCHVDDVVDGHIAAMEKGR  226 (334)
Q Consensus       151 ~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~  226 (334)
                      .+++.+.. .+++++++|++++|||+....  ...+..++.+...+... ..++++.+.++|+|++|+|+++..+++++.
T Consensus       160 ~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~  239 (345)
T 2z1m_A          160 WITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPE  239 (345)
T ss_dssp             HHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSSS
T ss_pred             HHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCC
Confidence            99998875 589999999999999985321  22234445455556543 356778889999999999999999998765


Q ss_pred             CCCeEEec-CCCCCHHHHHHHHHHHhCCCCCcc--cccHHHHHHHHHHHHHHHHHhCC-CCCCCHHHH-HHhhccceech
Q 019878          227 SGERYLLT-GENASFMQIFDMAAVITGTSRPRF--CIPLWLIEAYGWILVFFSRITGK-LPLISYPTV-HVLAHQWAYSC  301 (334)
Q Consensus       227 ~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~d~  301 (334)
                       +++||++ ++.+|+.|+++.+.+.+|.+.+..  .+|.+++..          ..+. .....+... ........+|+
T Consensus       240 -~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~d~  308 (345)
T 2z1m_A          240 -PDDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEKGIDR----------NTGKVIVEVSEEFFRPAEVDILVGNP  308 (345)
T ss_dssp             -CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEET----------TTCCEEEEECGGGSCSSCCCBCCBCC
T ss_pred             -CceEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccccc----------cccccccccCcccCCCCCcceeecCH
Confidence             4799996 678999999999999999875432  122211100          0000 000000000 00113345799


Q ss_pred             HHHHHhcCCCCC-CHHHHHHHHHHHHHhc
Q 019878          302 VKAKTELGYNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       302 ~k~~~~lG~~p~-~~~e~i~~~~~~~~~~  329 (334)
                      +|++++|||+|+ +++++++++++|+.++
T Consensus       309 ~k~~~~lG~~p~~~~~~~l~~~~~~~~~~  337 (345)
T 2z1m_A          309 EKAMKKLGWKPRTTFDELVEIMMEADLKR  337 (345)
T ss_dssp             HHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCcccCCHHHHHHHHHHHHHHH
Confidence            999999999998 9999999999999864

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=100.00  E-value=6.4e-44  Score=318.33  Aligned_cols=302  Identities=24%  Similarity=0.347  Sum_probs=216.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC------CCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL------PSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |+|||||||||||++|++.|+++|++|+++.|+.++....      ....+++++.+|++|.+.+.++++++|+|||+|+
T Consensus        10 ~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A~   89 (338)
T 2rh8_A           10 KTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHVAT   89 (338)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEESS
T ss_pred             CEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEeCC
Confidence            5799999999999999999999999999999986543221      1113688999999999999999999999999999


Q ss_pred             ccCCCCCCcc-cchhhhhHHHHHHHHHHHhcCCCcEEEEecccc-eeccCC-C--ccCCCCCcccc-----cc-ccChHH
Q 019878           75 LVEPWLPDPS-RFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF-ALGSTD-G--YIADENQVHEE-----KY-FCTQYE  143 (334)
Q Consensus        75 ~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~-v~~~~~-~--~~~~e~~~~~~-----~~-~~~~Y~  143 (334)
                      .......++. .++++|+.++.+++++|++.++++|||++||.+ +|+... .  .+.+|+.+.+.     .. +.+.|+
T Consensus        90 ~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~  169 (338)
T 2rh8_A           90 PVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYP  169 (338)
T ss_dssp             CCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCCCT
T ss_pred             ccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccchHH
Confidence            7543323443 488999999999999999974489999999987 444221 1  24555543221     11 122699


Q ss_pred             HHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCc-hhHHHHHHHHHHcCCCCccccC------CCCceeeeeHHHHH
Q 019878          144 RSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTT-GNLVAKLMIERFNGRLPGYIGY------GNDRFSFCHVDDVV  215 (334)
Q Consensus       144 ~sK~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~v~D~a  215 (334)
                      .+|.++|.+++.+.+ +|++++++||+++|||+.... ...+.. +...+.+... .++.      +...++|+|++|+|
T Consensus       170 ~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~-~~~~~~g~~~-~~~~~~~~~~~~~~~~~i~v~Dva  247 (338)
T 2rh8_A          170 ASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGL-AMSLITGNEF-LINGMKGMQMLSGSVSIAHVEDVC  247 (338)
T ss_dssp             TSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHH-HHHHHHTCHH-HHHHHHHHHHHHSSEEEEEHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHH-HHHHHcCCcc-ccccccccccccCcccEEEHHHHH
Confidence            999999999998765 699999999999999975432 122222 2222334322 2221      11234899999999


Q ss_pred             HHHHHHhhcCCCCCeEEecCCCCCHHHHHHHHHHHhCC-CCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhh
Q 019878          216 DGHIAAMEKGRSGERYLLTGENASFMQIFDMAAVITGT-SRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLA  294 (334)
Q Consensus       216 ~a~~~~~~~~~~g~~~~i~g~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (334)
                      ++++.+++++..++.|+++++.+|+.|+++.+.+..+. +.|...                    ...+.         .
T Consensus       248 ~a~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~~~~~~~~~~~~--------------------~~~~~---------~  298 (338)
T 2rh8_A          248 RAHIFVAEKESASGRYICCAANTSVPELAKFLSKRYPQYKVPTDF--------------------GDFPP---------K  298 (338)
T ss_dssp             HHHHHHHHCTTCCEEEEECSEEECHHHHHHHHHHHCTTSCCCCCC--------------------TTSCS---------S
T ss_pred             HHHHHHHcCCCcCCcEEEecCCCCHHHHHHHHHHhCCCCCCCCCC--------------------CCCCc---------C
Confidence            99999998766666899887779999999999987652 222100                    00000         0


Q ss_pred             ccceechHHHHHhcCCCCC-CHHHHHHHHHHHHHhcCCCCC
Q 019878          295 HQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSSGMIKY  334 (334)
Q Consensus       295 ~~~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~~~~~~  334 (334)
                      ....+|++|+ ++|||+|+ +++++|+++++|+++++.+++
T Consensus       299 ~~~~~d~~k~-~~lG~~p~~~l~~gl~~~~~~~~~~~~~~~  338 (338)
T 2rh8_A          299 SKLIISSEKL-VKEGFSFKYGIEEIYDESVEYFKAKGLLQN  338 (338)
T ss_dssp             CSCCCCCHHH-HHHTCCCSCCHHHHHHHHHHHHHHTTCC--
T ss_pred             cceeechHHH-HHhCCCCCCCHHHHHHHHHHHHHHcCCCCC
Confidence            1246799999 56999999 999999999999999988763

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-42  Score=313.86  Aligned_cols=313  Identities=20%  Similarity=0.188  Sum_probs=236.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC--CCCC---------CCCCeEEEEcCCCChhhHHHHhcC--CCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI--SGLP---------SEGALELVYGDVTDYRSLVDACFG--CHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~---------~~~~v~~~~~Dl~d~~~~~~~~~~--~d~   68 (334)
                      +|||||||||||++|++.|+++|++|++++|+....  ..+.         ...+++++.+|++|.+.+.+++++  +|+
T Consensus        26 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~  105 (375)
T 1t2a_A           26 VALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTE  105 (375)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCCE
Confidence            699999999999999999999999999999986531  1111         123689999999999999999875  799


Q ss_pred             EEEeccccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCC---cEEEEecccceeccCCCccCCCCCccccccccChHH
Q 019878           69 IFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTV---EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (334)
Q Consensus        69 vih~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (334)
                      |||+||....  +..++...+++|+.++.+++++|.+. ++   ++||++||.++|+.....+.+|+.+..+   .+.|+
T Consensus       106 vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~-~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~---~~~Y~  181 (375)
T 1t2a_A          106 IYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTC-GLINSVKFYQASTSELYGKVQEIPQKETTPFYP---RSPYG  181 (375)
T ss_dssp             EEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHT-TCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCC---CSHHH
T ss_pred             EEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHh-CCCccceEEEecchhhhCCCCCCCCCccCCCCC---CChhH
Confidence            9999997432  13456778899999999999999997 56   7999999999999776656666665443   58899


Q ss_pred             HHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCc--hhHHHHHHHHHHcCCCC-ccccCCCCceeeeeHHHHHHHHH
Q 019878          144 RSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTT--GNLVAKLMIERFNGRLP-GYIGYGNDRFSFCHVDDVVDGHI  219 (334)
Q Consensus       144 ~sK~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~D~a~a~~  219 (334)
                      .+|.++|.+++.+.+ .+++++++||+.+|||+....  ...+..++.+...+..+ ..++++++.++|+|++|+|++++
T Consensus       182 ~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~  261 (375)
T 1t2a_A          182 AAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMW  261 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHH
Confidence            999999999998875 599999999999999975321  23344555555666543 45688899999999999999999


Q ss_pred             HHhhcCCCCCeEEec-CCCCCHHHHHHHHHHHhCCCCCcc--cccHHHHHHHHHHHHHHHHHhCC-CCCCCHHHH-HHhh
Q 019878          220 AAMEKGRSGERYLLT-GENASFMQIFDMAAVITGTSRPRF--CIPLWLIEAYGWILVFFSRITGK-LPLISYPTV-HVLA  294 (334)
Q Consensus       220 ~~~~~~~~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~  294 (334)
                      .+++++. +++||++ ++.+|+.|+++.+.+.+|.+.+..  .+|.|++..          ..+. .....+... ....
T Consensus       262 ~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~----------~~~~~~~~~~~~~~~~~~~  330 (375)
T 1t2a_A          262 LMLQNDE-PEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCK----------ETGKVHVTVDLKYYRPTEV  330 (375)
T ss_dssp             HHHHSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEET----------TTCCEEEEECGGGSCSSCC
T ss_pred             HHHhcCC-CceEEEeCCCcccHHHHHHHHHHHhCCCccccccccccccccc----------ccccceeecCcccCCcccc
Confidence            9998765 4789996 678999999999999999874421  122211100          0000 000000000 0011


Q ss_pred             ccceechHHHHHhcCCCCC-CHHHHHHHHHHHHHhc
Q 019878          295 HQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       295 ~~~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~  329 (334)
                      ....+|++|++++|||+|+ +++++|+++++|+.+.
T Consensus       331 ~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  366 (375)
T 1t2a_A          331 DFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVEL  366 (375)
T ss_dssp             CBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             hhhcCCHHHHHHhcCCCccCCHHHHHHHHHHHHHHh
Confidence            2345799999999999999 9999999999999874

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=100.00  E-value=5.3e-43  Score=312.88  Aligned_cols=302  Identities=18%  Similarity=0.189  Sum_probs=236.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC-------CeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc-CCCEEEEe
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG-------HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-GCHVIFHT   72 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-~~d~vih~   72 (334)
                      |+||||||+||||++|++.|+++|       ++|++++|+....... ...+++++.+|++|.+.+.++++ ++|+|||+
T Consensus        15 ~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~   93 (342)
T 2hrz_A           15 MHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAG-FSGAVDARAADLSAPGEAEKLVEARPDVIFHL   93 (342)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTT-CCSEEEEEECCTTSTTHHHHHHHTCCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccc-cCCceeEEEcCCCCHHHHHHHHhcCCCEEEEC
Confidence            679999999999999999999999       8999999987543321 12368999999999999999884 89999999


Q ss_pred             ccccCC-CCCCcccchhhhhHHHHHHHHHHHhcC----CCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHH
Q 019878           73 AALVEP-WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (334)
Q Consensus        73 a~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~  147 (334)
                      ||.... +..++...+++|+.++.+++++|++.+    .+++||++||.++|+.....+.+|+++..+   .+.|+.+|.
T Consensus        94 A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~---~~~Y~~sK~  170 (342)
T 2hrz_A           94 AAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTP---LTSYGTQKA  170 (342)
T ss_dssp             CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCC---SSHHHHHHH
T ss_pred             CccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCC---cchHHHHHH
Confidence            997432 224567788999999999999999873    278999999999999764445666655433   589999999


Q ss_pred             HHHHHHHHHhh-cCCCEEEEecCceec-CCCCC--chhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhh
Q 019878          148 VADKIALQAAS-EGLPIVPVYPGVIYG-PGKLT--TGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAME  223 (334)
Q Consensus       148 ~~E~~~~~~~~-~g~~~~ilR~~~v~G-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~  223 (334)
                      ++|.+++.+.+ .+++.+++|++.+|| |+...  ...++..++.....+....+++.++..++++|++|+|++++.+++
T Consensus       171 ~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~  250 (342)
T 2hrz_A          171 ICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIHGAM  250 (342)
T ss_dssp             HHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHHHHHh
Confidence            99999999875 479999999999998 66421  134566666666777765555666778889999999999999998


Q ss_pred             cCC----CCCeEEecCCCCCHHHHHHHHHHHhCCCCC--cccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHh-hcc
Q 019878          224 KGR----SGERYLLTGENASFMQIFDMAAVITGTSRP--RFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVL-AHQ  296 (334)
Q Consensus       224 ~~~----~g~~~~i~g~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  296 (334)
                      .+.    .+++||++|+.+|+.|+++.+.+.+|.+.+  ....|...                        ..... ...
T Consensus       251 ~~~~~~~~~~~~ni~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~------------------------~~~~~~~~~  306 (342)
T 2hrz_A          251 IDVEKVGPRRNLSMPGLSATVGEQIEALRKVAGEKAVALIRREPNEM------------------------IMRMCEGWA  306 (342)
T ss_dssp             SCHHHHCSCCEEECCCEEEEHHHHHHHHHHHHCHHHHTTEEECCCHH------------------------HHHHHTTSC
T ss_pred             ccccccCCccEEEcCCCCCCHHHHHHHHHHHcCcccccceeeccCcc------------------------hhhhhcccc
Confidence            753    478999988779999999999999987531  11111100                        00000 111


Q ss_pred             ceechHHHHHhcCCCCC-CHHHHHHHHHHHHHhcCCC
Q 019878          297 WAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSSGMI  332 (334)
Q Consensus       297 ~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~~~~  332 (334)
                      ..+|++|+++ |||+|+ +++++|+++++|++ .+.+
T Consensus       307 ~~~d~~k~~~-lG~~p~~~l~e~l~~~~~~~~-~~~~  341 (342)
T 2hrz_A          307 PGFEAKRARE-LGFTAESSFEEIIQVHIEDEL-GGSL  341 (342)
T ss_dssp             CCBCCHHHHH-TTCCCCSSHHHHHHHHHHHHS-TTCC
T ss_pred             cccChHHHHH-cCCCCCCCHHHHHHHHHHHhc-CCCC
Confidence            2479999998 999998 99999999999997 4443

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=100.00  E-value=2.5e-43  Score=308.13  Aligned_cols=274  Identities=16%  Similarity=0.103  Sum_probs=222.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc--CCCEEEEeccccCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVEP   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vih~a~~~~~   78 (334)
                      |+|||||||||||++|++.|+++|++|++++|+                .+|++|.+.+.++++  ++|+|||+||....
T Consensus        13 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~   76 (292)
T 1vl0_A           13 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQ----------------DLDITNVLAVNKFFNEKKPNVVINCAAHTAV   76 (292)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT----------------TCCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             ceEEEECCCChHHHHHHHHHHhCCCeEEeccCc----------------cCCCCCHHHHHHHHHhcCCCEEEECCccCCH
Confidence            589999999999999999999999999999986                269999999999998  79999999997442


Q ss_pred             --CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHH
Q 019878           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (334)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~  156 (334)
                        +..++...+++|+.++.+++++|++. ++ +||++||.++|+.....+.+|+.+..+   .+.|+.+|.++|.+++.+
T Consensus        77 ~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~---~~~Y~~sK~~~E~~~~~~  151 (292)
T 1vl0_A           77 DKCEEQYDLAYKINAIGPKNLAAAAYSV-GA-EIVQISTDYVFDGEAKEPITEFDEVNP---QSAYGKTKLEGENFVKAL  151 (292)
T ss_dssp             HHHHHCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGSCSCCSSCBCTTSCCCC---CSHHHHHHHHHHHHHHHH
T ss_pred             HHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEechHHeECCCCCCCCCCCCCCCC---ccHHHHHHHHHHHHHHhh
Confidence              23466778999999999999999998 56 999999999999876556667665443   589999999999999985


Q ss_pred             hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCCCCeEEec-C
Q 019878          157 ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLT-G  235 (334)
Q Consensus       157 ~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g~~~~i~-g  235 (334)
                      .   .+++++||+.+||+ .   .+++..++.....+....+.+  ++.++|+|++|+|+++..+++++ .+++||++ +
T Consensus       152 ~---~~~~~lR~~~v~G~-~---~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~-~~~~~~i~~~  221 (292)
T 1vl0_A          152 N---PKYYIVRTAWLYGD-G---NNFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEK-NYGTFHCTCK  221 (292)
T ss_dssp             C---SSEEEEEECSEESS-S---SCHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHT-CCEEEECCCB
T ss_pred             C---CCeEEEeeeeeeCC-C---cChHHHHHHHHhcCCcEEeec--CeeeCCccHHHHHHHHHHHHhcC-CCcEEEecCC
Confidence            4   46999999999999 2   234555555555565554444  57899999999999999999887 78899996 5


Q ss_pred             CCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhcCCCCCCH
Q 019878          236 ENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPRSL  315 (334)
Q Consensus       236 ~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~  315 (334)
                      +.+|+.|+++.+.+.+|.+.+...+|.+..              .. +..       ......+|++|++++|||+|+++
T Consensus       222 ~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~--------------~~-~~~-------~~~~~~~d~~k~~~~lG~~p~~~  279 (292)
T 1vl0_A          222 GICSWYDFAVEIFRLTGIDVKVTPCTTEEF--------------PR-PAK-------RPKYSVLRNYMLELTTGDITREW  279 (292)
T ss_dssp             SCEEHHHHHHHHHHHHCCCCEEEEECSTTS--------------CC-SSC-------CCSBCCBCCHHHHHTTCCCCCBH
T ss_pred             CCccHHHHHHHHHHHhCCCCceeecccccc--------------Cc-ccC-------CCccccccHHHHHHHcCCCCCCH
Confidence            789999999999999998765544442110              00 000       12345689999999999999999


Q ss_pred             HHHHHHHHHHHH
Q 019878          316 KEGLQEVLPWLR  327 (334)
Q Consensus       316 ~e~i~~~~~~~~  327 (334)
                      +++|+++++||+
T Consensus       280 ~~~l~~~~~~~~  291 (292)
T 1vl0_A          280 KESLKEYIDLLQ  291 (292)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhc
Confidence            999999999985

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=100.00  E-value=1.3e-42  Score=335.42  Aligned_cols=318  Identities=20%  Similarity=0.263  Sum_probs=245.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC-CCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhh-HHHHhcCCCEEEEeccccCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRS-LVDACFGCHVIFHTAALVEP   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~-~~~~~~~~d~vih~a~~~~~   78 (334)
                      |+|||||||||||++|+++|+++ |++|++++|+......+....+++++.+|++|.++ +.++++++|+|||+||....
T Consensus       316 ~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih~Aa~~~~  395 (660)
T 1z7e_A          316 TRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP  395 (660)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHHHCSEEEECCCCCCT
T ss_pred             ceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhcCCCEEEECceecCc
Confidence            57999999999999999999998 89999999987655433333479999999999765 77788899999999997543


Q ss_pred             --CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCcc----ccccccChHHHHHHHHHHH
Q 019878           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVH----EEKYFCTQYERSKAVADKI  152 (334)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~----~~~~~~~~Y~~sK~~~E~~  152 (334)
                        +..++...+++|+.++.+++++|.+. + ++||++||.++|+.....+.+|+++.    +...+.+.|+.+|.++|.+
T Consensus       396 ~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~  473 (660)
T 1z7e_A          396 IEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRV  473 (660)
T ss_dssp             HHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHH
T ss_pred             cccccCHHHHHHhhhHHHHHHHHHHHHh-C-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHHHHHHHH
Confidence              23456778899999999999999997 5 89999999999998766566666542    1123456899999999999


Q ss_pred             HHHHhh-cCCCEEEEecCceecCCCCC-------chhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhc
Q 019878          153 ALQAAS-EGLPIVPVYPGVIYGPGKLT-------TGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEK  224 (334)
Q Consensus       153 ~~~~~~-~g~~~~ilR~~~v~G~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~  224 (334)
                      ++.+.+ .|++++++||+++||++...       ..+.+..++.....+..+.+++++++.++|+|++|+|++++.++++
T Consensus       474 ~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~  553 (660)
T 1z7e_A          474 IWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIEN  553 (660)
T ss_dssp             HHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHHC
T ss_pred             HHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhC
Confidence            998764 69999999999999998642       1345666777777788777778888999999999999999999987


Q ss_pred             CC---CCCeEEecC-C-CCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhcccee
Q 019878          225 GR---SGERYLLTG-E-NASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAY  299 (334)
Q Consensus       225 ~~---~g~~~~i~g-~-~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (334)
                      +.   .|++||+++ + .+|+.|+++.+.+.+|.+.+...+|.+......   +. ....+...        .......+
T Consensus       554 ~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~~~p~~~~~~~~---~~-~~~~~~~~--------~~~~~~~~  621 (660)
T 1z7e_A          554 AGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVV---ES-SSYYGKGY--------QDVEHRKP  621 (660)
T ss_dssp             GGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGGGSCCCCCEEEE---CT-HHHHCTTC--------CCCSCCCB
T ss_pred             ccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCcccccCccccccch---hc-cccccccc--------cchhhccc
Confidence            53   588999975 4 699999999999999876443333321000000   00 00001000        00123467


Q ss_pred             chHHHHHhcCCCCC-CHHHHHHHHHHHHHhcCCC
Q 019878          300 SCVKAKTELGYNPR-SLKEGLQEVLPWLRSSGMI  332 (334)
Q Consensus       300 d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~~~~  332 (334)
                      |++|++++|||+|+ +++++|+++++||+++..+
T Consensus       622 d~~ka~~~LG~~p~~~l~egl~~~i~~~~~~~~~  655 (660)
T 1z7e_A          622 SIRNAHRCLDWEPKIDMQETIDETLDFFLRTVDL  655 (660)
T ss_dssp             CCHHHHHHHCCCCCCCHHHHHHHHHHHHHTTSCC
T ss_pred             CHHHHHHhcCCCccCcHHHHHHHHHHHHHhhccc
Confidence            99999999999998 9999999999999887654

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=100.00  E-value=9.5e-43  Score=315.76  Aligned_cols=298  Identities=19%  Similarity=0.178  Sum_probs=232.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC-----CCCCCC-----CC-CeEEEEcCCCChhhHHHHhcC--CCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-----ISGLPS-----EG-ALELVYGDVTDYRSLVDACFG--CHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~~~~-----~~-~v~~~~~Dl~d~~~~~~~~~~--~d~   68 (334)
                      +|||||||||||++|++.|+++|++|++++|+...     ...+..     .+ +++++.+|++|.+.+.+++++  +|+
T Consensus        30 ~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~  109 (381)
T 1n7h_A           30 IALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPDE  109 (381)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             eEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCCE
Confidence            79999999999999999999999999999998754     222211     01 688999999999999999875  799


Q ss_pred             EEEeccccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCCc-----EEEEecccceeccCCCccCCCCCccccccccCh
Q 019878           69 IFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVE-----KIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (334)
Q Consensus        69 vih~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  141 (334)
                      |||+||....  +..++...+++|+.++.+++++|.+. +++     +||++||.++||.... +.+|+.+..+   .+.
T Consensus       110 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~~~~~~v~~SS~~vyg~~~~-~~~E~~~~~~---~~~  184 (381)
T 1n7h_A          110 VYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH-TIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPFHP---RSP  184 (381)
T ss_dssp             EEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHH-HHHHCCCCEEEEEEEGGGGTTSCS-SBCTTSCCCC---CSH
T ss_pred             EEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCccCCccEEEEeCcHHHhCCCCC-CCCCCCCCCC---CCc
Confidence            9999997542  12456778899999999999999987 455     9999999999997766 6666654443   589


Q ss_pred             HHHHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCc--hhHHHHHHHHHHcCCCC-ccccCCCCceeeeeHHHHHHH
Q 019878          142 YERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTT--GNLVAKLMIERFNGRLP-GYIGYGNDRFSFCHVDDVVDG  217 (334)
Q Consensus       142 Y~~sK~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~D~a~a  217 (334)
                      |+.+|.++|.+++.+.. .|++++++|++++|||+....  ...+..++.....+... ..++++++.++|+|++|+|++
T Consensus       185 Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a  264 (381)
T 1n7h_A          185 YAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEA  264 (381)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHH
Confidence            99999999999998875 599999999999999975321  12344455555566543 346788899999999999999


Q ss_pred             HHHHhhcCCCCCeEEec-CCCCCHHHHHHHHHHHhCCCCCc-ccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhc
Q 019878          218 HIAAMEKGRSGERYLLT-GENASFMQIFDMAAVITGTSRPR-FCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAH  295 (334)
Q Consensus       218 ~~~~~~~~~~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (334)
                      ++.+++++. +++||++ ++.+|+.|+++.+.+.+|.+.+. ..+..                    ....+    ....
T Consensus       265 ~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~--------------------~~~~~----~~~~  319 (381)
T 1n7h_A          265 MWLMLQQEK-PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQ--------------------RYFRP----AEVD  319 (381)
T ss_dssp             HHHHHTSSS-CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECG--------------------GGSCS----SCCC
T ss_pred             HHHHHhCCC-CCeEEeeCCCCCcHHHHHHHHHHHcCCCcccccccCc--------------------ccCCc----cccc
Confidence            999998765 5799996 57799999999999999875321 11100                    00000    0012


Q ss_pred             cceechHHHHHhcCCCCC-CHHHHHHHHHHHHHhc
Q 019878          296 QWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       296 ~~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~  329 (334)
                      ...+|++|++++|||+|+ +++++|+++++||.++
T Consensus       320 ~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  354 (381)
T 1n7h_A          320 NLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLEL  354 (381)
T ss_dssp             BCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             cccCCHHHHHHhcCCcccCCHHHHHHHHHHHHHhh
Confidence            345799999999999998 9999999999999764

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=100.00  E-value=1.5e-42  Score=309.30  Aligned_cols=301  Identities=24%  Similarity=0.355  Sum_probs=220.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC------CCCC-CCCeEEEEcCCCChhhHHHHhcCCCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS------GLPS-EGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------~~~~-~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a   73 (334)
                      |+|||||||||||++|+++|+++|++|+++.|+.....      .+.. ..+++++.+|++|.+.+.++++++|+|||+|
T Consensus         6 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~A   85 (337)
T 2c29_D            6 ETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFHVA   85 (337)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEEECC
T ss_pred             CEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEEEec
Confidence            47999999999999999999999999999999865311      1111 1258899999999999999999999999999


Q ss_pred             cccCCCCCCcc-cchhhhhHHHHHHHHHHHhcCCCcEEEEecccc-eeccCC-CccCCCCCccccc------cccChHHH
Q 019878           74 ALVEPWLPDPS-RFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF-ALGSTD-GYIADENQVHEEK------YFCTQYER  144 (334)
Q Consensus        74 ~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~-v~~~~~-~~~~~e~~~~~~~------~~~~~Y~~  144 (334)
                      +.......++. ..+++|+.++.+++++|++.+.++|||++||.+ +|+... ..+.+|+.+.+..      .+.++|+.
T Consensus        86 ~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~  165 (337)
T 2c29_D           86 TPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFV  165 (337)
T ss_dssp             CCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHH
T ss_pred             cccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccchHHH
Confidence            87533323333 588999999999999999984489999999987 454322 2344555432211      12457999


Q ss_pred             HHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCc-hhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHh
Q 019878          145 SKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTT-GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAM  222 (334)
Q Consensus       145 sK~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~  222 (334)
                      +|.++|.++..+.+ +|++++++||+++|||+.... ...+...+ ..+.+... .++.+ ...+|+|++|+|++++.++
T Consensus       166 sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~-~~~~g~~~-~~~~~-~~~~~i~v~Dva~a~~~~~  242 (337)
T 2c29_D          166 SKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITAL-SPITGNEA-HYSII-RQGQFVHLDDLCNAHIYLF  242 (337)
T ss_dssp             HHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHT-HHHHTCGG-GHHHH-TEEEEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHH-HHHcCCCc-ccccc-CCCCEEEHHHHHHHHHHHh
Confidence            99999999988764 699999999999999975432 11111111 12334322 22222 2345999999999999999


Q ss_pred             hcCCCCCeEEecCCCCCHHHHHHHHHHHhCC-CCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceech
Q 019878          223 EKGRSGERYLLTGENASFMQIFDMAAVITGT-SRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSC  301 (334)
Q Consensus       223 ~~~~~g~~~~i~g~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  301 (334)
                      +++..++.|+++++.+|+.|+++.+.+..+. +.+...                    ...+        .......+|+
T Consensus       243 ~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~--------------------~~~~--------~~~~~~~~d~  294 (337)
T 2c29_D          243 ENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPTEF--------------------KGVD--------ENLKSVCFSS  294 (337)
T ss_dssp             HCTTCCEEEEECCEEEEHHHHHHHHHHHCTTSCCCSCC--------------------TTCC--------TTCCCCEECC
T ss_pred             cCcccCceEEEeCCCCCHHHHHHHHHHHCCCccCCCCC--------------------Cccc--------CCCccccccH
Confidence            8766566888887779999999999987632 222100                    0000        0123456899


Q ss_pred             HHHHHhcCCCCC-CHHHHHHHHHHHHHhcCCCC
Q 019878          302 VKAKTELGYNPR-SLKEGLQEVLPWLRSSGMIK  333 (334)
Q Consensus       302 ~k~~~~lG~~p~-~~~e~i~~~~~~~~~~~~~~  333 (334)
                      +|+ ++|||+|+ +++++++++++|++++++++
T Consensus       295 ~k~-~~lG~~p~~~l~e~l~~~~~~~~~~~~~~  326 (337)
T 2c29_D          295 KKL-TDLGFEFKYSLEDMFTGAVDTCRAKGLLP  326 (337)
T ss_dssp             HHH-HHHTCCCCCCHHHHHHHHHHHHHHTTSSC
T ss_pred             HHH-HHcCCCcCCCHHHHHHHHHHHHHHcCCCC
Confidence            999 68999999 99999999999999988765

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=100.00  E-value=1.5e-42  Score=302.27  Aligned_cols=274  Identities=19%  Similarity=0.182  Sum_probs=216.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~   80 (334)
                      |+|||||+ ||||++|++.|+++|++|++++|++.+...+.. .+++++.+|+.|.+     +.++|+|||+|+..... 
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~d~~-----~~~~d~vi~~a~~~~~~-   77 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA-SGAEPLLWPGEEPS-----LDGVTHLLISTAPDSGG-   77 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH-TTEEEEESSSSCCC-----CTTCCEEEECCCCBTTB-
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh-CCCeEEEecccccc-----cCCCCEEEECCCccccc-
Confidence            68999998 999999999999999999999998765432221 37999999999955     78899999999964321 


Q ss_pred             CCcccchhhhhHHHHHHHHHHHhc-CCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHhhc
Q 019878           81 PDPSRFFAVNVEGLKNVVQAAKET-KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE  159 (334)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~  159 (334)
                                ...+.++++++++. .++++|||+||.++||.....+.+|+.+..+   .+.|+.+|.++|++++.+  .
T Consensus        78 ----------~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p---~~~Y~~sK~~~E~~~~~~--~  142 (286)
T 3ius_A           78 ----------DPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTP---TAARGRWRVMAEQQWQAV--P  142 (286)
T ss_dssp             ----------CHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCC---CSHHHHHHHHHHHHHHHS--T
T ss_pred             ----------cHHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCC---CCHHHHHHHHHHHHHHhh--c
Confidence                      12357899999883 2689999999999999887767777776554   489999999999999986  6


Q ss_pred             CCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCCCCeEEec-CCCC
Q 019878          160 GLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLT-GENA  238 (334)
Q Consensus       160 g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g~~~~i~-g~~~  238 (334)
                      |++++++||+++||++....        .+...+....+.++ ++.++|+|++|+|+++..+++++..|++||++ ++.+
T Consensus       143 ~~~~~ilRp~~v~G~~~~~~--------~~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~~~g~~~~i~~~~~~  213 (286)
T 3ius_A          143 NLPLHVFRLAGIYGPGRGPF--------SKLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMARPDPGAVYNVCDDEPV  213 (286)
T ss_dssp             TCCEEEEEECEEEBTTBSSS--------TTSSSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHHSCCTTCEEEECCSCCB
T ss_pred             CCCEEEEeccceECCCchHH--------HHHhcCCccccCCC-CcccceEEHHHHHHHHHHHHhCCCCCCEEEEeCCCCc
Confidence            89999999999999975431        22334555544444 68899999999999999999998888999997 5779


Q ss_pred             CHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhcCCCCC--CHH
Q 019878          239 SFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPR--SLK  316 (334)
Q Consensus       239 s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~--~~~  316 (334)
                      |+.|+++.+.+.+|.+.+.. ++...                  ....+...........+|++|++++|||+|+  +++
T Consensus       214 s~~e~~~~i~~~~g~~~~~~-~~~~~------------------~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~p~~~  274 (286)
T 3ius_A          214 PPQDVIAYAAELQGLPLPPA-VDFDK------------------ADLTPMARSFYSENKRVRNDRIKEELGVRLKYPNYR  274 (286)
T ss_dssp             CHHHHHHHHHHHHTCCCCCE-EEGGG------------------SCCCHHHHHTTSCCCEECCHHHHHTTCCCCSCSSHH
T ss_pred             cHHHHHHHHHHHcCCCCCcc-cchhh------------------hccChhHHHhhcCCceeehHHHHHHhCCCCCcCCHH
Confidence            99999999999999876542 11100                  0112222233346677899999999999999  599


Q ss_pred             HHHHHHHHH
Q 019878          317 EGLQEVLPW  325 (334)
Q Consensus       317 e~i~~~~~~  325 (334)
                      ++|+++++.
T Consensus       275 e~l~~~~~~  283 (286)
T 3ius_A          275 VGLEALQAD  283 (286)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHh
Confidence            999999874

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.5e-41  Score=297.83  Aligned_cols=284  Identities=17%  Similarity=0.195  Sum_probs=216.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecccc--CC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV--EP   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~--~~   78 (334)
                      |||||||||||||++|+++|+++||+|++++|++.+.       .+   ..|    +...+.++++|+|||+|+..  ..
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~-------~~---~~~----~~~~~~l~~~d~vihla~~~i~~~   66 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG-------RI---TWD----ELAASGLPSCDAAVNLAGENILNP   66 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-------EE---EHH----HHHHHCCCSCSEEEECCCCCSSCT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC-------ee---ecc----hhhHhhccCCCEEEEeccCcccch
Confidence            9999999999999999999999999999999986531       12   122    33456678899999999852  11


Q ss_pred             C----CCCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHH
Q 019878           79 W----LPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIA  153 (334)
Q Consensus        79 ~----~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~  153 (334)
                      .    ......+++.|+.++.+|+++++..+. .++||++||.++||+....+.+|+.+..+   .+.|+..+...|...
T Consensus        67 ~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~---~~~~~~~~~~~e~~~  143 (298)
T 4b4o_A           67 LRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGD---FDFFSNLVTKWEAAA  143 (298)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSC---SSHHHHHHHHHHHHH
T ss_pred             hhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccc---cchhHHHHHHHHHHH
Confidence            1    112345778999999999999988732 34599999999999988877777776554   367777777766543


Q ss_pred             HHHhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCCCCeEEe
Q 019878          154 LQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLL  233 (334)
Q Consensus       154 ~~~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g~~~~i  233 (334)
                      . ....+++++++||+.||||+.    +.+..++.....+ ....++++++.++|||++|+++++..+++++..+++||+
T Consensus       144 ~-~~~~~~~~~~~r~~~v~g~~~----~~~~~~~~~~~~~-~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~~g~yn~  217 (298)
T 4b4o_A          144 R-LPGDSTRQVVVRSGVVLGRGG----GAMGHMLLPFRLG-LGGPIGSGHQFFPWIHIGDLAGILTHALEANHVHGVLNG  217 (298)
T ss_dssp             C-CSSSSSEEEEEEECEEECTTS----HHHHHHHHHHHTT-CCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTTCCEEEEE
T ss_pred             H-hhccCCceeeeeeeeEEcCCC----CchhHHHHHHhcC-CcceecccCceeecCcHHHHHHHHHHHHhCCCCCCeEEE
Confidence            2 224689999999999999963    3444554444444 445678999999999999999999999999877779999


Q ss_pred             c-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhcCCCC
Q 019878          234 T-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNP  312 (334)
Q Consensus       234 ~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p  312 (334)
                      + ++++|+.|+++.+++.+|++. ..++|.|+++...          +      .........+..++++|++ ++||++
T Consensus       218 ~~~~~~t~~e~~~~ia~~lgrp~-~~pvP~~~~~~~~----------g------~~~~~~~l~~~rv~~~kl~-~~Gf~f  279 (298)
T 4b4o_A          218 VAPSSATNAEFAQTFGAALGRRA-FIPLPSAVVQAVF----------G------RQRAIMLLEGQKVIPRRTL-ATGYQY  279 (298)
T ss_dssp             SCSCCCBHHHHHHHHHHHHTCCC-CCCBCHHHHHHHH----------C------HHHHHHHHCCCCBCCHHHH-HTTCCC
T ss_pred             ECCCccCHHHHHHHHHHHhCcCC-cccCCHHHHHHHh----------c------chhHHHhhCCCEEcHHHHH-HCCCCC
Confidence            7 578999999999999999865 4578998876531          1      1111222344456889998 599999


Q ss_pred             C--CHHHHHHHHHHH
Q 019878          313 R--SLKEGLQEVLPW  325 (334)
Q Consensus       313 ~--~~~e~i~~~~~~  325 (334)
                      +  +++++++++++.
T Consensus       280 ~yp~l~~al~~l~~~  294 (298)
T 4b4o_A          280 SFPELGAALKEIAEN  294 (298)
T ss_dssp             SCCSHHHHHHHHHHC
T ss_pred             CCCCHHHHHHHHHHh
Confidence            8  799999998874

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=100.00  E-value=8.4e-42  Score=302.52  Aligned_cols=300  Identities=23%  Similarity=0.328  Sum_probs=212.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEc-CCCCCCC------CCC-CCCeEEEEcCCCChhhHHHHhcCCCEEEEe
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISG------LPS-EGALELVYGDVTDYRSLVDACFGCHVIFHT   72 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~------~~~-~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~   72 (334)
                      ++|||||||||||++|++.|+++|++|++++| +++....      +.. ..+++++.+|++|.+.+.++++++|+|||+
T Consensus         2 k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   81 (322)
T 2p4h_X            2 GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFHT   81 (322)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEEC
T ss_pred             CEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEEc
Confidence            57999999999999999999999999999998 5432111      110 024788999999999999999999999999


Q ss_pred             ccccCCCCCCc-ccchhhhhHHHHHHHHHHHhcCCCcEEEEeccccee-ccCC-CccCCCCCccccc-----cccC-hHH
Q 019878           73 AALVEPWLPDP-SRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL-GSTD-GYIADENQVHEEK-----YFCT-QYE  143 (334)
Q Consensus        73 a~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~-~~~~-~~~~~e~~~~~~~-----~~~~-~Y~  143 (334)
                      |+.......++ ..++++|+.++.+++++|.+..++++||++||.+++ +... ..+.+|+.+.+..     .+.+ .|+
T Consensus        82 A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y~  161 (322)
T 2p4h_X           82 ASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYA  161 (322)
T ss_dssp             CCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHH
T ss_pred             CCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccccHH
Confidence            98653333333 348899999999999999987457899999998754 3322 2344554432110     1122 699


Q ss_pred             HHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCc-hhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHH
Q 019878          144 RSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTT-GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAA  221 (334)
Q Consensus       144 ~sK~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~  221 (334)
                      .||.++|.++.++.+ +|++++++||+++|||+.... ...+. .+.....+.... ++.  ..++|+|++|+|++++.+
T Consensus       162 ~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~-~~~~~~~g~~~~-~~~--~~~~~i~v~Dva~a~~~~  237 (322)
T 2p4h_X          162 VSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIE-KALVLVLGKKEQ-IGV--TRFHMVHVDDVARAHIYL  237 (322)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHH-HHTHHHHSCGGG-CCE--EEEEEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHH-HHHHHHhCCCcc-CcC--CCcCEEEHHHHHHHHHHH
Confidence            999999999998875 699999999999999975322 12221 122233444332 222  334899999999999999


Q ss_pred             hhcCCCCCeEEecCCCCCHHHHHHHHHHHhCC-CCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceec
Q 019878          222 MEKGRSGERYLLTGENASFMQIFDMAAVITGT-SRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYS  300 (334)
Q Consensus       222 ~~~~~~g~~~~i~g~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  300 (334)
                      ++++...+.||++++.+|+.|+++.+.+..+. +.+...                  .....   ..      .....+|
T Consensus       238 ~~~~~~~g~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~------------------~~~~~---~~------~~~~~~d  290 (322)
T 2p4h_X          238 LENSVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQILTVD------------------ELKEI---KG------ARLPDLN  290 (322)
T ss_dssp             HHSCCCCEEEECCCEEEEHHHHHHHHHHHCTTSCCCCTT------------------TTTTC---CC------EECCEEC
T ss_pred             hhCcCCCCCEEEcCCCCCHHHHHHHHHHhCCCCCCCCCc------------------cccCC---CC------Ccceecc
Confidence            98754433588777789999999999887642 211100                  00000   00      1345689


Q ss_pred             hHHHHHhcCCCCC-CHHHHHHHHHHHHHhcCCC
Q 019878          301 CVKAKTELGYNPR-SLKEGLQEVLPWLRSSGMI  332 (334)
Q Consensus       301 ~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~~~~  332 (334)
                      ++|+ ++|||+|+ +++++|+++++|+++++.+
T Consensus       291 ~~k~-~~lG~~p~~~~~~~l~~~~~~~~~~~~~  322 (322)
T 2p4h_X          291 TKKL-VDAGFDFKYTIEDMFDDAIQCCKEKGYL  322 (322)
T ss_dssp             CHHH-HHTTCCCCCCHHHHHHHHHHHHHHHTCC
T ss_pred             cHHH-HHhCCccCCCHHHHHHHHHHHHHhcCCC
Confidence            9999 56999999 9999999999999988764

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=100.00  E-value=3.3e-42  Score=304.30  Aligned_cols=285  Identities=18%  Similarity=0.153  Sum_probs=198.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcC--CCEEEEeccccCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAALVEP   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vih~a~~~~~   78 (334)
                      |+|||||||||||++|++.|+++|++|++++|+...       ++  ++.+|++|.+.+.+++++  +|+|||+||....
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~   73 (315)
T 2ydy_A            3 RRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-------PK--FEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRP   73 (315)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---------------------------CHHHHHHHCCSEEEECC-----
T ss_pred             CeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-------CC--eEEecCCCHHHHHHHHHhhCCCEEEECCcccCh
Confidence            589999999999999999999999999999987653       13  788999999999888875  9999999997543


Q ss_pred             --CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHH
Q 019878           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (334)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~  156 (334)
                        +..++...+++|+.++.+++++|.+. ++ +||++||.++|+. ...+.+|+++..+   .+.|+.+|.++|.+++.+
T Consensus        74 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~~~-~~~~~~E~~~~~~---~~~Y~~sK~~~e~~~~~~  147 (315)
T 2ydy_A           74 DVVENQPDAASQLNVDASGNLAKEAAAV-GA-FLIYISSDYVFDG-TNPPYREEDIPAP---LNLYGKTKLDGEKAVLEN  147 (315)
T ss_dssp             --------------CHHHHHHHHHHHHH-TC-EEEEEEEGGGSCS-SSCSBCTTSCCCC---CSHHHHHHHHHHHHHHHH
T ss_pred             hhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchHHHcCC-CCCCCCCCCCCCC---cCHHHHHHHHHHHHHHHh
Confidence              34567789999999999999999998 45 9999999999987 4445566654433   589999999999999985


Q ss_pred             hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHH-cCCCCccccCCCCceeeeeHHHHHHHHHHHhhcC----CCCCeE
Q 019878          157 ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERF-NGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG----RSGERY  231 (334)
Q Consensus       157 ~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~----~~g~~~  231 (334)
                         +++++++||+.+||++.....+++..++.... .+.....  .+++.++|+|++|+|+++..++.++    ..+++|
T Consensus       148 ---~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~  222 (315)
T 2ydy_A          148 ---NLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANM--DHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTF  222 (315)
T ss_dssp             ---CTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEE--ECSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEE
T ss_pred             ---CCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeee--ccCceECcEEHHHHHHHHHHHHHhhccccCCCCeE
Confidence               57789999999999976422233344444444 4544333  3468899999999999999998764    568899


Q ss_pred             Eec-CCCCCHHHHHHHHHHHhCCCCC-cccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhcC
Q 019878          232 LLT-GENASFMQIFDMAAVITGTSRP-RFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELG  309 (334)
Q Consensus       232 ~i~-g~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG  309 (334)
                      |++ ++.+|+.|+++.+.+.+|.+.+ ..++|.+                ......       ......+|++|+++. |
T Consensus       223 ~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~----------------~~~~~~-------~~~~~~~d~~k~~~~-G  278 (315)
T 2ydy_A          223 HWSGNEQMTKYEMACAIADAFNLPSSHLRPITDS----------------PVLGAQ-------RPRNAQLDCSKLETL-G  278 (315)
T ss_dssp             ECCCSCCBCHHHHHHHHHHHTTCCCTTEEEECSC----------------CCSSSC-------CCSBCCBCCHHHHHT-T
T ss_pred             EEcCCCcccHHHHHHHHHHHhCCChhheeccccc----------------cccccC-------CCcccccchHHHHhc-C
Confidence            996 5789999999999999998765 3233210                000000       113456899999987 9


Q ss_pred             CCCC-CHHHHHHHHHHHHHhc
Q 019878          310 YNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       310 ~~p~-~~~e~i~~~~~~~~~~  329 (334)
                      |+|. +++++|+++++|++++
T Consensus       279 ~~p~~~~~~~l~~~~~~~~~~  299 (315)
T 2ydy_A          279 IGQRTPFRIGIKESLWPFLID  299 (315)
T ss_dssp             CCCCCCHHHHHHHHHGGGCC-
T ss_pred             CCCCCCHHHHHHHHHHHHccc
Confidence            9998 9999999999999775

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=100.00  E-value=1.9e-42  Score=309.11  Aligned_cols=296  Identities=18%  Similarity=0.186  Sum_probs=228.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC------CCCeEEE-EcCCCChhhHHHHhcCCCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------EGALELV-YGDVTDYRSLVDACFGCHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~v~~~-~~Dl~d~~~~~~~~~~~d~vih~a   73 (334)
                      |+|||||||||||++|++.|+++|++|++++|+..+...+..      ..+++++ .+|++|.+.+.++++++|+|||+|
T Consensus        12 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~A   91 (342)
T 1y1p_A           12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAHIA   91 (342)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEECC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEEEeC
Confidence            579999999999999999999999999999997543211100      0268888 899999999999999999999999


Q ss_pred             cccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCC----CccCCCCCcc-------------ccc
Q 019878           74 ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD----GYIADENQVH-------------EEK  136 (334)
Q Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~----~~~~~e~~~~-------------~~~  136 (334)
                      +..... .++...+++|+.++.+++++|.+..++++||++||.++|+...    +.+.+|++..             .+.
T Consensus        92 ~~~~~~-~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~  170 (342)
T 1y1p_A           92 SVVSFS-NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQ  170 (342)
T ss_dssp             CCCSCC-SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTT
T ss_pred             CCCCCC-CCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhccccccccc
Confidence            975433 4667789999999999999998644689999999999986432    1345555421             122


Q ss_pred             cccChHHHHHHHHHHHHHHHhhc---CCCEEEEecCceecCCCCCch--hHHHHHHHHHHcCCCCccccCCCCceeeeeH
Q 019878          137 YFCTQYERSKAVADKIALQAASE---GLPIVPVYPGVIYGPGKLTTG--NLVAKLMIERFNGRLPGYIGYGNDRFSFCHV  211 (334)
Q Consensus       137 ~~~~~Y~~sK~~~E~~~~~~~~~---g~~~~ilR~~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  211 (334)
                      .+.+.|+.+|.++|.+++.+.+.   +++++++||+++||+......  +.+..++.....+....+++.+ +.++|+|+
T Consensus       171 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v  249 (342)
T 1y1p_A          171 KSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALM-PPQYYVSA  249 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTC-CSEEEEEH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccC-CcCCEeEH
Confidence            34578999999999999987642   789999999999999754321  2566777777778776666665 78899999


Q ss_pred             HHHHHHHHHHhhcCC-CCCeEEecCCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHH
Q 019878          212 DDVVDGHIAAMEKGR-SGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTV  290 (334)
Q Consensus       212 ~D~a~a~~~~~~~~~-~g~~~~i~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (334)
                      +|+|++++.++.++. .|..+..+|+.+|+.|+++.+.+.+|.+ +. ..+                    .+..     
T Consensus       250 ~Dva~a~~~~~~~~~~~g~~~~~~g~~~s~~e~~~~i~~~~~~~-~~-~~~--------------------~~~~-----  302 (342)
T 1y1p_A          250 VDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSK-TF-PAD--------------------FPDQ-----  302 (342)
T ss_dssp             HHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTS-CC-CCC--------------------CCCC-----
T ss_pred             HHHHHHHHHHHcCcccCCceEEEeCCCCCHHHHHHHHHHHCCCc-cC-CCC--------------------CCcc-----
Confidence            999999999998754 4666666777899999999999999874 11 110                    0000     


Q ss_pred             HHhhccceechHHHHHhcCC---CCC-CHHHHHHHHHHHHH
Q 019878          291 HVLAHQWAYSCVKAKTELGY---NPR-SLKEGLQEVLPWLR  327 (334)
Q Consensus       291 ~~~~~~~~~d~~k~~~~lG~---~p~-~~~e~i~~~~~~~~  327 (334)
                        ......+|++|+++.|||   .+. +++++|+++++|++
T Consensus       303 --~~~~~~~d~~k~~~~lg~~~~~~~~~l~~~l~~~~~~~~  341 (342)
T 1y1p_A          303 --GQDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGSET  341 (342)
T ss_dssp             --CCCCCEECCHHHHHHHHHTTCCSCCCHHHHHHHHHCCSC
T ss_pred             --ccccccCChHHHHHHHhhcccCCcCCHHHHHHHHHHHhh
Confidence              011246799999998987   444 99999999999874

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=100.00  E-value=1.6e-40  Score=323.18  Aligned_cols=299  Identities=18%  Similarity=0.227  Sum_probs=228.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CC--CCCCeEEEEcCCCChhhHHHHhc--CCCEEEEe
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LP--SEGALELVYGDVTDYRSLVDACF--GCHVIFHT   72 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~--~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vih~   72 (334)
                      |+|||||||||||++|++.|+++|++|++++|+......    +.  ...+++++.+|++|.+.+.++++  ++|+|||+
T Consensus        12 ~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~Vih~   91 (699)
T 1z45_A           12 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF   91 (699)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEEEEC
Confidence            579999999999999999999999999999997653210    00  01368899999999999999998  79999999


Q ss_pred             ccccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCC----ccCCCCCccccccccChHHHHH
Q 019878           73 AALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG----YIADENQVHEEKYFCTQYERSK  146 (334)
Q Consensus        73 a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~----~~~~e~~~~~~~~~~~~Y~~sK  146 (334)
                      ||....  ...++...+++|+.++.+++++|++. ++++||++||.++|+....    .+.+|+.+..   +.+.|+.+|
T Consensus        92 A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~---p~~~Y~~sK  167 (699)
T 1z45_A           92 AGLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVFSSSATVYGDATRFPNMIPIPEECPLG---PTNPYGHTK  167 (699)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCC---CCSHHHHHH
T ss_pred             CcccCcCccccCHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECcHHHhCCCccccccCCccccCCCC---CCChHHHHH
Confidence            997432  22345668899999999999999998 6899999999999986431    3344444333   358899999


Q ss_pred             HHHHHHHHHHhh---cCCCEEEEecCceecCCCCC---------chhHHHHHHHHHHcC--CCCcccc------CCCCce
Q 019878          147 AVADKIALQAAS---EGLPIVPVYPGVIYGPGKLT---------TGNLVAKLMIERFNG--RLPGYIG------YGNDRF  206 (334)
Q Consensus       147 ~~~E~~~~~~~~---~g~~~~ilR~~~v~G~~~~~---------~~~~~~~~~~~~~~~--~~~~~~~------~~~~~~  206 (334)
                      .++|++++.+..   .|++++++||+++||++...         ..+++. ++.+...+  ....+++      ++++.+
T Consensus       168 ~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~g~~~~  246 (699)
T 1z45_A          168 YAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLP-YMAQVAVGRREKLYIFGDDYDSRDGTPIR  246 (699)
T ss_dssp             HHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHH-HHHHHHTTSSSCCCCC------CCSSCEE
T ss_pred             HHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHH-HHHHHHhcCCCceEEeCCcccCCCCCeeE
Confidence            999999998764   58999999999999985321         123333 34444433  3444555      678899


Q ss_pred             eeeeHHHHHHHHHHHhhcC-------CCCCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHH
Q 019878          207 SFCHVDDVVDGHIAAMEKG-------RSGERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRI  278 (334)
Q Consensus       207 ~~i~v~D~a~a~~~~~~~~-------~~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (334)
                      +|+|++|+|++++.+++..       ..+++||++ ++.+|+.|+++.+.+.+|.+.+....+..               
T Consensus       247 ~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~---------------  311 (699)
T 1z45_A          247 DYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRR---------------  311 (699)
T ss_dssp             CEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC---------------------
T ss_pred             eeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCCceecCCC---------------
Confidence            9999999999999998742       235799996 67899999999999999987664322100               


Q ss_pred             hCCCCCCCHHHHHHhhccceechHHHHHhcCCCCC-CHHHHHHHHHHHHHhcCC
Q 019878          279 TGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSSGM  331 (334)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~~~  331 (334)
                      .+            ......+|++|++++|||+|+ +++++|+++++|++++..
T Consensus       312 ~~------------~~~~~~~d~~ka~~~LG~~p~~~l~egl~~~~~w~~~~~~  353 (699)
T 1z45_A          312 AG------------DVLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTENPF  353 (699)
T ss_dssp             ---------------CCCCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHCTT
T ss_pred             CC------------ccccccCCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCCc
Confidence            00            012456899999999999998 999999999999988643

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=100.00  E-value=4.4e-39  Score=295.84  Aligned_cols=311  Identities=18%  Similarity=0.178  Sum_probs=228.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC---C--------------CCCCCeEEEEcCCCChhhHHHHh
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG---L--------------PSEGALELVYGDVTDYRSLVDAC   63 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~--------------~~~~~v~~~~~Dl~d~~~~~~~~   63 (334)
                      |+|||||||||||++|++.|++.|++|++++|++.....   +              ....+++++.+|++|.+.+. .+
T Consensus        70 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~~  148 (427)
T 4f6c_A           70 GNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-LP  148 (427)
T ss_dssp             EEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC-CS
T ss_pred             CEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC-Cc
Confidence            379999999999999999999999999999998762100   0              00137999999999988877 67


Q ss_pred             cCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccC-----CCccCCCCCccccccc
Q 019878           64 FGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST-----DGYIADENQVHEEKYF  138 (334)
Q Consensus        64 ~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~-----~~~~~~e~~~~~~~~~  138 (334)
                      .++|+|||+||.... ..++...+++|+.++.+++++|.+  ++++||++||.++ |..     ...+..|+++..+..+
T Consensus       149 ~~~d~Vih~A~~~~~-~~~~~~~~~~Nv~g~~~l~~aa~~--~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~~~~~  224 (427)
T 4f6c_A          149 ENMDTIIHAGARTDH-FGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQLL  224 (427)
T ss_dssp             SCCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHH--TTCEEEEEEEGGG-GSEECSSCSCCEECTTCSCSSCCC
T ss_pred             CCCCEEEECCcccCC-CCCHHHHHHHHHHHHHHHHHHHHh--cCCcEEEECchHh-CCCccCCCCCccccccccccCCCC
Confidence            789999999998643 256778999999999999999998  4789999999999 542     2345566665444446


Q ss_pred             cChHHHHHHHHHHHHHHHhhcCCCEEEEecCceecCCCCCc------hhHHHHHHHHHHcCCCCccccCCCCceeeeeHH
Q 019878          139 CTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTT------GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVD  212 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~~~g~~~~ilR~~~v~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  212 (334)
                      .+.|+.+|+++|.+++.+.+.|++++++||++|||+.....      .+.+..++.....+..... +.++..++|+|++
T Consensus       225 ~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~v~  303 (427)
T 4f6c_A          225 TSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDFSFVD  303 (427)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEH-HHHTCEECCEEHH
T ss_pred             CCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCC-ccccceEEEeeHH
Confidence            79999999999999999887899999999999999975432      2346666666665554432 4468899999999


Q ss_pred             HHHHHHHHHhhcCCCCCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHH
Q 019878          213 DVVDGHIAAMEKGRSGERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVH  291 (334)
Q Consensus       213 D~a~a~~~~~~~~~~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (334)
                      |+|++++.++..+..+++||++ ++.+++.|+++.+.+ +|  .+..+.+.|...+...-...+..+.         ...
T Consensus       304 DvA~ai~~~~~~~~~g~~~~l~~~~~~s~~el~~~i~~-~g--~~~~~~~~~~~~l~~~~~~~~~~~~---------~~~  371 (427)
T 4f6c_A          304 TTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKR-KE--IELVSDESFNEILQKQDMYETIGLT---------SVD  371 (427)
T ss_dssp             HHHHHHHHHTTSCCCCSEEEESCSCCEEHHHHHHHHHS-SC--CEEECHHHHHHHHHHTTCHHHHHHH---------HHH
T ss_pred             HHHHHHHHHHcCCCCCCEEEecCCCCCcHHHHHHHHHH-cC--CcccCHHHHHHHHHhcCchhhhhhh---------hcc
Confidence            9999999999887788999996 578999999999998 56  5666667776554321000000000         001


Q ss_pred             HhhccceechHHHH---HhcCCCCC-CHHHHHHHHHHHHHhc
Q 019878          292 VLAHQWAYSCVKAK---TELGYNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       292 ~~~~~~~~d~~k~~---~~lG~~p~-~~~e~i~~~~~~~~~~  329 (334)
                      .......+|+++..   +.+||++. ..++.++++++++.+.
T Consensus       372 ~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~l~~~  413 (427)
T 4f6c_A          372 REQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTI  413 (427)
T ss_dssp             HTSEECEECCHHHHHHHHHTTCCCCCCCHHHHHHHHHHHHHH
T ss_pred             ccCCceeccHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence            12234567887766   45699988 5566899999888763

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=100.00  E-value=9.8e-40  Score=306.51  Aligned_cols=289  Identities=17%  Similarity=0.135  Sum_probs=210.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCC--
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP--   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~--   78 (334)
                      |+|||||||||||++|++.|+++|++|++++|+..+..         .+.+|+.+.  +.++++++|+|||+|+....  
T Consensus       148 m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~---------~v~~d~~~~--~~~~l~~~D~Vih~A~~~~~~~  216 (516)
T 3oh8_A          148 LTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG---------KRFWDPLNP--ASDLLDGADVLVHLAGEPIFGR  216 (516)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT---------CEECCTTSC--CTTTTTTCSEEEECCCC-----
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc---------ceeecccch--hHHhcCCCCEEEECCCCccccc
Confidence            78999999999999999999999999999999977532         256787753  45677889999999997432  


Q ss_pred             -CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceec-cCCCccCCCCCccccccccChHHHHHHHHHHHHHHH
Q 019878           79 -WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG-STDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (334)
Q Consensus        79 -~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~-~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~  156 (334)
                       ...++..++++|+.++.++++++.+..++++||++||.++|| .....+.+|+.+.+    .+.|+.+|...|..+..+
T Consensus       217 ~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~----~~~y~~~~~~~E~~~~~~  292 (516)
T 3oh8_A          217 FNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESESG----DDFLAEVCRDWEHATAPA  292 (516)
T ss_dssp             CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCC----SSHHHHHHHHHHHTTHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCCC----cChHHHHHHHHHHHHHHH
Confidence             233456688999999999999954545789999999999999 45455666666553    478999999999888776


Q ss_pred             hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCCCCeEEec-C
Q 019878          157 ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLT-G  235 (334)
Q Consensus       157 ~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g~~~~i~-g  235 (334)
                      ...|++++++||+++||++.    +.+..++.. ...+....++++++.++|+|++|+|+++..+++++..+++||++ +
T Consensus       293 ~~~gi~~~ilRp~~v~Gp~~----~~~~~~~~~-~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~g~~ni~~~  367 (516)
T 3oh8_A          293 SDAGKRVAFIRTGVALSGRG----GMLPLLKTL-FSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQISGPINAVAP  367 (516)
T ss_dssp             HHTTCEEEEEEECEEEBTTB----SHHHHHHHT-TC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCTTCCEEEEESCS
T ss_pred             HhCCCCEEEEEeeEEECCCC----ChHHHHHHH-HHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCcccCCcEEEECC
Confidence            67899999999999999963    334443333 33333446788999999999999999999999987777799996 5


Q ss_pred             CCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhcCCCCC-C
Q 019878          236 ENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPR-S  314 (334)
Q Consensus       236 ~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~-~  314 (334)
                      +.+|+.|+++.+.+.+|.+. ...+|.|.....          .+...     .......+..++++|++ +|||+|+ +
T Consensus       368 ~~~s~~el~~~i~~~~g~~~-~~~~p~~~~~~~----------~g~~~-----~~~~~~~~~~~~~~kl~-~lG~~~~~~  430 (516)
T 3oh8_A          368 NPVSNADMTKILATSMHRPA-FIQIPSLGPKIL----------LGSQG-----AEELALASQRTAPAALE-NLSHTFRYT  430 (516)
T ss_dssp             CCEEHHHHHHHTTC--------------------------------CC-----GGGGGGCEEEECCHHHH-HTTCCCSCS
T ss_pred             CCCCHHHHHHHHHHHhCCCC-CCCCCHHHHHHH----------hCCch-----hHHHhhcCCeechHHHH-HCCCCCCCC
Confidence            78999999999999999865 445665543321          11100     01122344567889998 5999999 5


Q ss_pred             -HHHHHHHHHHHH
Q 019878          315 -LKEGLQEVLPWL  326 (334)
Q Consensus       315 -~~e~i~~~~~~~  326 (334)
                       ++++|+++++..
T Consensus       431 ~l~e~l~~~l~~~  443 (516)
T 3oh8_A          431 DIGAAIAHELGYE  443 (516)
T ss_dssp             SHHHHHHHHHTCC
T ss_pred             CHHHHHHHHhCcc
Confidence             999999998753

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=100.00  E-value=2.1e-38  Score=297.35  Aligned_cols=309  Identities=17%  Similarity=0.180  Sum_probs=228.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC---C--------------CCCCCeEEEEcCCCChhhHHHHh
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG---L--------------PSEGALELVYGDVTDYRSLVDAC   63 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~--------------~~~~~v~~~~~Dl~d~~~~~~~~   63 (334)
                      |+|||||||||||++|++.|.++|++|++++|+......   +              ...++++++.+|+.|.+.+. ..
T Consensus       151 ~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~~  229 (508)
T 4f6l_B          151 GNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-LP  229 (508)
T ss_dssp             EEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-CS
T ss_pred             CeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-Cc
Confidence            579999999999999999999999999999998762100   0              00137999999999987777 66


Q ss_pred             cCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccC-----CCccCCCCCccccccc
Q 019878           64 FGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST-----DGYIADENQVHEEKYF  138 (334)
Q Consensus        64 ~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~-----~~~~~~e~~~~~~~~~  138 (334)
                      .++|+|||+||.... ..++..++++|+.++.+++++|.+  .+++|||+||.++ |..     ...+..|+++..+..+
T Consensus       230 ~~~D~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~--~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~~~~~~  305 (508)
T 4f6l_B          230 ENMDTIIHAGARTDH-FGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQLL  305 (508)
T ss_dssp             SCCSEEEECCCC---------CCHHHHHHHHHHHHHHHHT--TTCEEEEEEESCT-TSEECTTCSCCEECTTCSCSSBCC
T ss_pred             cCCCEEEECCceecC-CCCHHHHhhhHHHHHHHHHHHHHh--CCCcEEEeCChhh-ccCCccCCcCcccccccccccccC
Confidence            789999999997643 346678899999999999999998  4689999999999 432     2345566665444445


Q ss_pred             cChHHHHHHHHHHHHHHHhhcCCCEEEEecCceecCCCCCc------hhHHHHHHHHHHcCCCCccccCCCCceeeeeHH
Q 019878          139 CTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTT------GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVD  212 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~~~g~~~~ilR~~~v~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  212 (334)
                      .+.|+.+|+++|++++.+.+.|++++++||++|||++....      ...+..++.....++... .+.+++.++|+|++
T Consensus       306 ~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~g~~~~~~v~v~  384 (508)
T 4f6l_B          306 TSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIG-VSMAEMPVDFSFVD  384 (508)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEE-TTGGGSEEECEEHH
T ss_pred             CCcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCC-CCccCceEEEEcHH
Confidence            78999999999999999887899999999999999975432      234566666665554432 24468999999999


Q ss_pred             HHHHHHHHHhhcCCCCCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHH-HHHHHHHhCCCCCCCHHHH
Q 019878          213 DVVDGHIAAMEKGRSGERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWI-LVFFSRITGKLPLISYPTV  290 (334)
Q Consensus       213 D~a~a~~~~~~~~~~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  290 (334)
                      |+|++++.++.++..+++||++ ++.+++.|+++.+.+..   .+..+.+.|...+...- .++.....          .
T Consensus       385 DvA~ai~~~~~~~~~~~~~nl~~~~~~s~~el~~~i~~~~---~~~~~~~~w~~~l~~~~~~~~~~~~~----------~  451 (508)
T 4f6l_B          385 TTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKRKE---IELVSDESFNEILQKQDMYETIGLTS----------V  451 (508)
T ss_dssp             HHHHHHHHHTTBCCSCSEEEESCSCEEEHHHHHHHHHSSC---CEEECHHHHHHHHHTTCCHHHHHHHH----------T
T ss_pred             HHHHHHHHHHhCCCCCCEEEeCCCCCCCHHHHHHHHHHcC---CcccCHHHHHHHHHhcCCccchhccc----------c
Confidence            9999999999987788999997 57799999999999864   55666677765543210 00000000          0


Q ss_pred             HHhhccceechHHHH---HhcCCCCC-CHHHHHHHHHHHHHh
Q 019878          291 HVLAHQWAYSCVKAK---TELGYNPR-SLKEGLQEVLPWLRS  328 (334)
Q Consensus       291 ~~~~~~~~~d~~k~~---~~lG~~p~-~~~e~i~~~~~~~~~  328 (334)
                      ........+|+++..   +.+||.+. ..++.++++++++.+
T Consensus       452 ~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~~~~  493 (508)
T 4f6l_B          452 DREQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKT  493 (508)
T ss_dssp             GGGSEECEECCHHHHHHHHHHSCCCCCCCHHHHHHHHHHHHH
T ss_pred             cccCcceecchHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHH
Confidence            012234567877665   45799988 668889999988876

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=100.00  E-value=6.8e-38  Score=272.97  Aligned_cols=277  Identities=18%  Similarity=0.193  Sum_probs=210.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC--CCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ--GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~   78 (334)
                      |+|||||||||||+++++.|+++  |++|++++|++.+...+.. .+++++.+|++|.+++.++++++|+|||+|+..  
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~-~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~--   77 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD-QGVEVRHGDYNQPESLQKAFAGVSKLLFISGPH--   77 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH-TTCEEEECCTTCHHHHHHHTTTCSEEEECCCCC--
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh-cCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCC--
Confidence            79999999999999999999998  9999999998765432211 268999999999999999999999999999852  


Q ss_pred             CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHhh
Q 019878           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS  158 (334)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~  158 (334)
                          ..  .+.|+.++.+++++|++. ++++||++||.++|..                 ..+|+.+|..+|++++.   
T Consensus        78 ----~~--~~~n~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~~-----------------~~~y~~~K~~~E~~~~~---  130 (287)
T 2jl1_A           78 ----YD--NTLLIVQHANVVKAARDA-GVKHIAYTGYAFAEES-----------------IIPLAHVHLATEYAIRT---  130 (287)
T ss_dssp             ----SC--HHHHHHHHHHHHHHHHHT-TCSEEEEEEETTGGGC-----------------CSTHHHHHHHHHHHHHH---
T ss_pred             ----cC--chHHHHHHHHHHHHHHHc-CCCEEEEECCCCCCCC-----------------CCchHHHHHHHHHHHHH---
Confidence                11  167999999999999997 7899999999988631                 13599999999999875   


Q ss_pred             cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC-CCCeEEecC-C
Q 019878          159 EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR-SGERYLLTG-E  236 (334)
Q Consensus       159 ~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-~g~~~~i~g-~  236 (334)
                      .|++++++||+.++|+..   ..++...+   ..+..  ..+.+++.++|+|++|+|+++..++.++. .|++||+++ +
T Consensus       131 ~~~~~~ilrp~~~~~~~~---~~~~~~~~---~~~~~--~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~  202 (287)
T 2jl1_A          131 TNIPYTFLRNALYTDFFV---NEGLRAST---ESGAI--VTNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSNQ  202 (287)
T ss_dssp             TTCCEEEEEECCBHHHHS---SGGGHHHH---HHTEE--EESCTTCCBCCBCHHHHHHHHHHHHTSSSCTTEEEEECCSS
T ss_pred             cCCCeEEEECCEeccccc---hhhHHHHh---hCCce--eccCCCCccCccCHHHHHHHHHHHhcCCCCCCcEEEecCCC
Confidence            799999999998888641   12222222   12332  24456788999999999999999998754 588999975 6


Q ss_pred             CCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCC-H---HHH-HHhhccceechHHHHHhcCCC
Q 019878          237 NASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLIS-Y---PTV-HVLAHQWAYSCVKAKTELGYN  311 (334)
Q Consensus       237 ~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~-~~~~~~~~~d~~k~~~~lG~~  311 (334)
                      .+|+.|+++.+.+.+|.+.+...+|.+........       .+ .+... .   ... .........|++|+++.|| .
T Consensus       203 ~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG-~  273 (287)
T 2jl1_A          203 PWTFDELAQILSEVSGKKVVHQPVSFEEEKNFLVN-------AG-VPEPFTEITAAIYDAISKGEASKTSDDLQKLIG-S  273 (287)
T ss_dssp             CBCHHHHHHHHHHHHSSCCEEEECCHHHHHHHHHH-------TT-CCHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHS-S
T ss_pred             cCCHHHHHHHHHHHHCCcceEEeCCHHHHHHHHHh-------CC-CCHHHHHHHHHHHHHHhCCCCcCCchHHHHHhC-C
Confidence            89999999999999999888777887654322110       01 00000 0   000 0112345678999999999 5


Q ss_pred             CCCHHHHHHHHHH
Q 019878          312 PRSLKEGLQEVLP  324 (334)
Q Consensus       312 p~~~~e~i~~~~~  324 (334)
                      +++++++++++++
T Consensus       274 ~~~l~e~l~~~~~  286 (287)
T 2jl1_A          274 LTPLKETVKQALK  286 (287)
T ss_dssp             CCCHHHHHHHHHT
T ss_pred             CCCHHHHHHHHhc
Confidence            5599999999875

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=100.00  E-value=3.1e-37  Score=286.88  Aligned_cols=328  Identities=19%  Similarity=0.215  Sum_probs=236.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC---CCeEEEEEcCCCCCC-------CCCC-------------CCCeEEEEcCCC---
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ---GHSVRALVRRTSDIS-------GLPS-------------EGALELVYGDVT---   54 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~---g~~V~~~~r~~~~~~-------~~~~-------------~~~v~~~~~Dl~---   54 (334)
                      |+|||||||||||++|+++|+++   |++|++++|+.....       .+..             ..+++++.+|++   
T Consensus        74 ~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~~~  153 (478)
T 4dqv_A           74 RTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEPD  153 (478)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTSGG
T ss_pred             CEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECCCcc
Confidence            68999999999999999999998   899999999865321       0000             137999999998   


Q ss_pred             ---ChhhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCC
Q 019878           55 ---DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQ  131 (334)
Q Consensus        55 ---d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~  131 (334)
                         |.+.+.++++++|+|||+||....  .++...+++|+.++.+++++|.+. ++++||++||.++|+.....+.+|+.
T Consensus       154 ~gld~~~~~~~~~~~D~Vih~Aa~~~~--~~~~~~~~~Nv~gt~~ll~aa~~~-~~~~~V~iSS~~v~~~~~~~~~~E~~  230 (478)
T 4dqv_A          154 LGLDQPMWRRLAETVDLIVDSAAMVNA--FPYHELFGPNVAGTAELIRIALTT-KLKPFTYVSTADVGAAIEPSAFTEDA  230 (478)
T ss_dssp             GGCCHHHHHHHHHHCCEEEECCSSCSB--SSCCEEHHHHHHHHHHHHHHHTSS-SCCCEEEEEEGGGGTTSCTTTCCSSS
T ss_pred             cCCCHHHHHHHHcCCCEEEECccccCC--cCHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeehhhcCccCCCCcCCcc
Confidence               667888999999999999998665  667789999999999999999997 78999999999999986665666665


Q ss_pred             cccccc--------ccChHHHHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCC----CchhHHHHHHHHHHc-CCCCc
Q 019878          132 VHEEKY--------FCTQYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKL----TTGNLVAKLMIERFN-GRLPG  197 (334)
Q Consensus       132 ~~~~~~--------~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~----~~~~~~~~~~~~~~~-~~~~~  197 (334)
                      ...+..        +.+.|+.+|+++|.+++.+.+ .|++++++||++|||++..    ....++..++..... |..+.
T Consensus       231 ~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P~  310 (478)
T 4dqv_A          231 DIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIAPR  310 (478)
T ss_dssp             CHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHCEEES
T ss_pred             cccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcCcccc
Confidence            433211        125599999999999999875 6999999999999998541    223456565555443 33322


Q ss_pred             cc-cC------CCCceeeeeHHHHHHHHHHHhhc----C-CCCCeEEec-CCC--CCHHHHHHHHHHHhCCCCCcc-ccc
Q 019878          198 YI-GY------GNDRFSFCHVDDVVDGHIAAMEK----G-RSGERYLLT-GEN--ASFMQIFDMAAVITGTSRPRF-CIP  261 (334)
Q Consensus       198 ~~-~~------~~~~~~~i~v~D~a~a~~~~~~~----~-~~g~~~~i~-g~~--~s~~e~~~~i~~~~g~~~~~~-~~~  261 (334)
                      .+ +.      +++.++|+|++|+|++++.++.+    + ..+++||++ ++.  +|+.|+++.+.+. |.+.+.+ +.|
T Consensus       311 ~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~-g~~~~~i~~~~  389 (478)
T 4dqv_A          311 SFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA-GYPIRRIDDFA  389 (478)
T ss_dssp             CSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT-TCSCEEESSHH
T ss_pred             cccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc-CCCcccCCCHH
Confidence            21 11      26788999999999999999875    2 457899997 465  9999999999996 7776665 688


Q ss_pred             HHHHHHHHHHHHHH--HHHhCCCCCCCHH-----HH-H----HhhccceechHHHHHhcCCCC------CCHHHHHHHHH
Q 019878          262 LWLIEAYGWILVFF--SRITGKLPLISYP-----TV-H----VLAHQWAYSCVKAKTELGYNP------RSLKEGLQEVL  323 (334)
Q Consensus       262 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~-----~~-~----~~~~~~~~d~~k~~~~lG~~p------~~~~e~i~~~~  323 (334)
                      .|+..+...+....  .......+.+...     .. .    .......+.....+..+|-..      ....+.|.+++
T Consensus       390 ~w~~~l~~~~~~~~~~~~~~~llpll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  469 (478)
T 4dqv_A          390 EWLQRFEASLGALPDRQRRHSVLPMLLASNSQRLQPLKPTRGCSAPTDRFRAAVRAAKVGSDKDNPDIPHVSAPTIINYV  469 (478)
T ss_dssp             HHHHHHHHHHHTSCHHHHHTSSSTTCC--CCCBCC------CCSSCCHHHHHHHHHTTCSSCSSSCCCCCCCHHHHHHHH
T ss_pred             HHHHHHHHHhccCccccccCcchhHHHHhhccCCCCCcccccCcchHHHHHHHHHHhccCCCcCcccCCCCCHHHHHHHH
Confidence            99888776553111  1112222222111     00 0    001111123333344566553      27889999999


Q ss_pred             HHHHhcCCC
Q 019878          324 PWLRSSGMI  332 (334)
Q Consensus       324 ~~~~~~~~~  332 (334)
                      ..++..|++
T Consensus       470 ~~~~~~~~~  478 (478)
T 4dqv_A          470 TNLQLLGLL  478 (478)
T ss_dssp             HHHHHTTCC
T ss_pred             HHHHhhcCC
Confidence            999887764

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=100.00  E-value=2.6e-38  Score=273.58  Aligned_cols=266  Identities=18%  Similarity=0.165  Sum_probs=206.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcC--CCEEEEeccccCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAALVEP   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vih~a~~~~~   78 (334)
                      |+|||||||||||+++++.|++ |++|++++|++...      .+   +.+|++|.+.+.+++++  +|+|||+||....
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~------~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~   70 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ------GG---YKLDLTDFPRLEDFIIKKRPDVIINAAAMTDV   70 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT------TC---EECCTTSHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC------CC---ceeccCCHHHHHHHHHhcCCCEEEECCcccCh
Confidence            8999999999999999999995 89999999987431      13   78999999999999886  9999999997542


Q ss_pred             --CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHH
Q 019878           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (334)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~  156 (334)
                        +..++...+++|+.++.+++++|.+. ++ +||++||.++|+.... +..|+.+..+   .+.|+.+|.++|.+++. 
T Consensus        71 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~iv~~SS~~~~~~~~~-~~~e~~~~~~---~~~Y~~sK~~~e~~~~~-  143 (273)
T 2ggs_A           71 DKCEIEKEKAYKINAEAVRHIVRAGKVI-DS-YIVHISTDYVFDGEKG-NYKEEDIPNP---INYYGLSKLLGETFALQ-  143 (273)
T ss_dssp             HHHHHCHHHHHHHHTHHHHHHHHHHHHT-TC-EEEEEEEGGGSCSSSC-SBCTTSCCCC---SSHHHHHHHHHHHHHCC-
T ss_pred             hhhhhCHHHHHHHhHHHHHHHHHHHHHh-CC-eEEEEecceeEcCCCC-CcCCCCCCCC---CCHHHHHHHHHHHHHhC-
Confidence              22466778999999999999999987 45 9999999999986654 4455544333   58899999999998875 


Q ss_pred             hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCCCCeEEecCC
Q 019878          157 ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTGE  236 (334)
Q Consensus       157 ~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g~~~~i~g~  236 (334)
                          ++++++||+.+||+     .++...++.....+......++   .++++|++|+|+++..++.++. +++||++++
T Consensus       144 ----~~~~~iR~~~v~G~-----~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~~~~-~g~~~i~~~  210 (273)
T 2ggs_A          144 ----DDSLIIRTSGIFRN-----KGFPIYVYKTLKEGKTVFAFKG---YYSPISARKLASAILELLELRK-TGIIHVAGE  210 (273)
T ss_dssp             ----TTCEEEEECCCBSS-----SSHHHHHHHHHHTTCCEEEESC---EECCCBHHHHHHHHHHHHHHTC-CEEEECCCC
T ss_pred             ----CCeEEEeccccccc-----cHHHHHHHHHHHcCCCEEeecC---CCCceEHHHHHHHHHHHHhcCc-CCeEEECCC
Confidence                67999999999983     2334444444455555544432   7899999999999999998765 459999777


Q ss_pred             CCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhcCCCC-C-C
Q 019878          237 NASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNP-R-S  314 (334)
Q Consensus       237 ~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p-~-~  314 (334)
                      .+|+.|+++.+.+.+|.+.+... |.+.              ....+        ....+..+|++|++++|||+| . +
T Consensus       211 ~~s~~e~~~~~~~~~g~~~~~~~-~~~~--------------~~~~~--------~~~~~~~~d~~k~~~~lG~~p~~~~  267 (273)
T 2ggs_A          211 RISRFELALKIKEKFNLPGEVKE-VDEV--------------RGWIA--------KRPYDSSLDSSRARKILSTDFYTLD  267 (273)
T ss_dssp             CEEHHHHHHHHHHHTTCCSCEEE-ESSC--------------TTCCS--------CCCSBCCBCCHHHHHHCSSCCCSCC
T ss_pred             cccHHHHHHHHHHHhCCChhhcc-cccc--------------ccccc--------CCCcccccCHHHHHHHhCCCCCCcc
Confidence            79999999999999998765432 1100              00000        012345689999999999999 4 8


Q ss_pred             HHHHH
Q 019878          315 LKEGL  319 (334)
Q Consensus       315 ~~e~i  319 (334)
                      +++++
T Consensus       268 l~~~~  272 (273)
T 2ggs_A          268 LDGMV  272 (273)
T ss_dssp             GGGCC
T ss_pred             ccccc
Confidence            88765

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=100.00  E-value=2.1e-37  Score=269.72  Aligned_cols=276  Identities=17%  Similarity=0.136  Sum_probs=205.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhC--CCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQ--GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPW   79 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~   79 (334)
                      +|||||||||||+++++.|+++  |++|++++|++.+...+.. .+++++.+|++|.+++.++++++|+|||+|+...  
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~--   77 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA-QGITVRQADYGDEAALTSALQGVEKLLLISSSEV--   77 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH-TTCEEEECCTTCHHHHHHHTTTCSEEEECC------
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc-CCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCc--
Confidence            6899999999999999999998  9999999998765432211 2689999999999999999999999999998521  


Q ss_pred             CCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHhhc
Q 019878           80 LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE  159 (334)
Q Consensus        80 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~  159 (334)
                              ..|+.++.+++++|++. ++++||++||.++|..                 ..+|+.+|..+|++++.   .
T Consensus        78 --------~~~~~~~~~l~~a~~~~-~~~~~v~~Ss~~~~~~-----------------~~~y~~sK~~~e~~~~~---~  128 (286)
T 2zcu_A           78 --------GQRAPQHRNVINAAKAA-GVKFIAYTSLLHADTS-----------------PLGLADEHIETEKMLAD---S  128 (286)
T ss_dssp             ------------CHHHHHHHHHHHH-TCCEEEEEEETTTTTC-----------------CSTTHHHHHHHHHHHHH---H
T ss_pred             --------hHHHHHHHHHHHHHHHc-CCCEEEEECCCCCCCC-----------------cchhHHHHHHHHHHHHH---c
Confidence                    25889999999999998 6899999999988720                 14599999999999876   6


Q ss_pred             CCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC-CCCeEEecC-CC
Q 019878          160 GLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR-SGERYLLTG-EN  237 (334)
Q Consensus       160 g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-~g~~~~i~g-~~  237 (334)
                      |++++++||+.++++.    ...+    .+...++.. ..+.+++.++|+|++|+|+++..++.++. .|++||+++ +.
T Consensus       129 ~~~~~ilrp~~~~~~~----~~~~----~~~~~~~~~-~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~  199 (286)
T 2zcu_A          129 GIVYTLLRNGWYSENY----LASA----PAALEHGVF-IGAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDSA  199 (286)
T ss_dssp             CSEEEEEEECCBHHHH----HTTH----HHHHHHTEE-EESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTCEEEECCSSC
T ss_pred             CCCeEEEeChHHhhhh----HHHh----HHhhcCCce-eccCCCCccccccHHHHHHHHHHHhcCCCCCCceEEEeCCCc
Confidence            8999999998766542    1122    222222222 24567788999999999999999998754 688999975 68


Q ss_pred             CCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCC-C---HHHHH-HhhccceechHHHHHhcCCCC
Q 019878          238 ASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLI-S---YPTVH-VLAHQWAYSCVKAKTELGYNP  312 (334)
Q Consensus       238 ~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~-~~~~~~~~d~~k~~~~lG~~p  312 (334)
                      +|+.|+++.+.+.+|.+.+...+|.+.......       ..+ .+.. .   ..... ........|++++++.|||.+
T Consensus       200 ~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~  271 (286)
T 2zcu_A          200 WTLTQLAAELTKQSGKQVTYQNLSEADFAAALK-------SVG-LPDGLADMLADSDVGASKGGLFDDSKTLSKLIGHPT  271 (286)
T ss_dssp             BCHHHHHHHHHHHHSSCCEEEECCHHHHHHHHT-------TSS-CCHHHHHHHHHHHHHHHTTTTCCCCCHHHHHHTSCC
T ss_pred             CCHHHHHHHHHHHHCCCCceeeCCHHHHHHHHH-------HcC-CCHHHHHHHHHHHHHHhCCCCccCchHHHHHhCcCC
Confidence            999999999999999988877888765433210       000 0000 0   00001 112234568899999999877


Q ss_pred             CCHHHHHHHHHHHH
Q 019878          313 RSLKEGLQEVLPWL  326 (334)
Q Consensus       313 ~~~~e~i~~~~~~~  326 (334)
                      ++++++++++++||
T Consensus       272 ~~~~e~l~~~~~~~  285 (286)
T 2zcu_A          272 TTLAESVSHLFNVN  285 (286)
T ss_dssp             CCHHHHHHGGGC--
T ss_pred             CCHHHHHHHHHhhc
Confidence            79999999999987

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=1.3e-36  Score=255.84  Aligned_cols=219  Identities=18%  Similarity=0.178  Sum_probs=173.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~   80 (334)
                      |+|||||||||||++|++.|+++|++|++++|++.+...+.  .+++++.+|++|.+++.++++++|+|||+|+...   
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~---   79 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN--EHLKVKKADVSSLDEVCEVCKGADAVISAFNPGW---   79 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC--TTEEEECCCTTCHHHHHHHHTTCSEEEECCCC-----
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc--CceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCC---
Confidence            57999999999999999999999999999999987765554  3899999999999999999999999999998642   


Q ss_pred             CCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHh-hc
Q 019878           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA-SE  159 (334)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~  159 (334)
                       +....+++|+.++.+++++|++. ++++||++||.++|+...+...+++...    +.+.|+.+|.++|.+++.+. +.
T Consensus        80 -~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~~~~~~~~~~~~~----p~~~Y~~sK~~~e~~~~~~~~~~  153 (227)
T 3dhn_A           80 -NNPDIYDETIKVYLTIIDGVKKA-GVNRFLMVGGAGSLFIAPGLRLMDSGEV----PENILPGVKALGEFYLNFLMKEK  153 (227)
T ss_dssp             -----CCSHHHHHHHHHHHHHHHT-TCSEEEEECCSTTSEEETTEEGGGTTCS----CGGGHHHHHHHHHHHHHTGGGCC
T ss_pred             -CChhHHHHHHHHHHHHHHHHHHh-CCCEEEEeCChhhccCCCCCccccCCcc----hHHHHHHHHHHHHHHHHHHhhcc
Confidence             12237899999999999999998 6899999999998876554433333222    34789999999999988887 57


Q ss_pred             CCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC-CCCeEEecC-CC
Q 019878          160 GLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR-SGERYLLTG-EN  237 (334)
Q Consensus       160 g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-~g~~~~i~g-~~  237 (334)
                      |++++++||+.+||++.... .+.       ..+..+...+  +. ++|+|++|+|+++..+++++. .|++|++++ ++
T Consensus       154 ~~~~~ilrp~~v~g~~~~~~-~~~-------~~~~~~~~~~--~~-~~~i~~~Dva~ai~~~l~~~~~~g~~~~~~~~~~  222 (227)
T 3dhn_A          154 EIDWVFFSPAADMRPGVRTG-RYR-------LGKDDMIVDI--VG-NSHISVEDYAAAMIDELEHPKHHQERFTIGYLEH  222 (227)
T ss_dssp             SSEEEEEECCSEEESCCCCC-CCE-------EESSBCCCCT--TS-CCEEEHHHHHHHHHHHHHSCCCCSEEEEEECCSC
T ss_pred             CccEEEEeCCcccCCCcccc-cee-------ecCCCcccCC--CC-CcEEeHHHHHHHHHHHHhCccccCcEEEEEeehh
Confidence            99999999999999976421 110       1222222222  22 899999999999999999886 699999975 66


Q ss_pred             CCHH
Q 019878          238 ASFM  241 (334)
Q Consensus       238 ~s~~  241 (334)
                      .++.
T Consensus       223 ~~~~  226 (227)
T 3dhn_A          223 HHHH  226 (227)
T ss_dssp             CC--
T ss_pred             cccC
Confidence            6664

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=100.00  E-value=1.5e-34  Score=252.07  Aligned_cols=275  Identities=19%  Similarity=0.215  Sum_probs=199.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC-CCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPW   79 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~   79 (334)
                      |||||||||||||+++++.|+++ |++|++++|++++...+.. .+++++.+|++|++++.++++++|+|||+|+.... 
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~-~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~-   78 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWR-GKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHP-   78 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGB-TTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCS-
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhh-CCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCcc-
Confidence            99999999999999999999998 9999999999876554432 37999999999999999999999999999986432 


Q ss_pred             CCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHhhc
Q 019878           80 LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE  159 (334)
Q Consensus        80 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~  159 (334)
                             ...|+.++.+++++|++. ++++||++||.+.   ...      .+       ..+...+..+|+.+..   .
T Consensus        79 -------~~~~~~~~~~l~~aa~~~-gv~~iv~~Ss~~~---~~~------~~-------~~~~~~~~~~e~~~~~---~  131 (289)
T 3e48_A           79 -------SFKRIPEVENLVYAAKQS-GVAHIIFIGYYAD---QHN------NP-------FHMSPYFGYASRLLST---S  131 (289)
T ss_dssp             -------HHHHHHHHHHHHHHHHHT-TCCEEEEEEESCC---STT------CC-------STTHHHHHHHHHHHHH---H
T ss_pred             -------chhhHHHHHHHHHHHHHc-CCCEEEEEcccCC---CCC------CC-------CccchhHHHHHHHHHH---c
Confidence                   245899999999999998 7999999999432   111      00       0122223344554443   7


Q ss_pred             CCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCC-CCeEEecCCCC
Q 019878          160 GLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRS-GERYLLTGENA  238 (334)
Q Consensus       160 g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~-g~~~~i~g~~~  238 (334)
                      |++++++||+.+||+.    ..++    .....+.. ...+.+++.++|+|++|+|+++..++.++.. |++||++++.+
T Consensus       132 g~~~~ilrp~~~~~~~----~~~~----~~~~~~~~-~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~~  202 (289)
T 3e48_A          132 GIDYTYVRMAMYMDPL----KPYL----PELMNMHK-LIYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLSGYSY  202 (289)
T ss_dssp             CCEEEEEEECEESTTH----HHHH----HHHHHHTE-ECCCCTTCEEEEECHHHHHHHHHHHHHCGGGTTCEEEECCEEE
T ss_pred             CCCEEEEecccccccc----HHHH----HHHHHCCC-EecCCCCceeeeEEHHHHHHHHHHHHcCCCcCCceEEeCCCcC
Confidence            9999999999999972    2222    22222222 2345678999999999999999999988754 88999997779


Q ss_pred             CHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHH----HHHHhhccceechHHHHHhcCCCCCC
Q 019878          239 SFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYP----TVHVLAHQWAYSCVKAKTELGYNPRS  314 (334)
Q Consensus       239 s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~d~~k~~~~lG~~p~~  314 (334)
                      |+.|+++.+.+.+|++.+...+|.......          ..........    ......+....+.+.+++.+|++|++
T Consensus       203 s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~----------~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~p~~  272 (289)
T 3e48_A          203 DMKELAAILSEASGTEIKYEPVSLETFAEM----------YDEPKGFGALLASMYHAGARGLLDQESNDFKQLVNDQPQT  272 (289)
T ss_dssp             EHHHHHHHHHHHHTSCCEECCCCHHHHHHH----------TCCSTTHHHHHHHHHHHHHTTTTCCCCSHHHHHHSSCCCC
T ss_pred             CHHHHHHHHHHHHCCceeEEeCCHHHHHHH----------hcCCccHHHHHHHHHHHHHCCCccccCchHHHHhCCCCCC
Confidence            999999999999999887777765432211          0000000000    00111223334567778889999999


Q ss_pred             HHHHHHHHH
Q 019878          315 LKEGLQEVL  323 (334)
Q Consensus       315 ~~e~i~~~~  323 (334)
                      +++.+++.-
T Consensus       273 ~~~~~~~~~  281 (289)
T 3e48_A          273 LQSFLQENI  281 (289)
T ss_dssp             HHHHHHC--
T ss_pred             HHHHHHHHH
Confidence            999887643

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=100.00  E-value=2.3e-35  Score=246.81  Aligned_cols=207  Identities=17%  Similarity=0.201  Sum_probs=174.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCC-hhhHHHHhcCCCEEEEeccccCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTD-YRSLVDACFGCHVIFHTAALVEPW   79 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d-~~~~~~~~~~~d~vih~a~~~~~~   79 (334)
                      |||||||||||||+++++.|+++|++|++++|++.+...+   .+++++.+|++| .+++.++++++|+|||+||...  
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~--   75 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGG--   75 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTT--
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---CCceEEEecccCCHHHHHHHHcCCCEEEECCcCCC--
Confidence            9999999999999999999999999999999998765544   489999999999 9999999999999999999643  


Q ss_pred             CCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHhhc
Q 019878           80 LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE  159 (334)
Q Consensus        80 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~  159 (334)
                          ...+++|+.++.+++++|++. ++++||++||.++++...   ..|    .+..+.+.|+.+|.++|++++  ...
T Consensus        76 ----~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~~~~---~~e----~~~~~~~~Y~~sK~~~e~~~~--~~~  141 (219)
T 3dqp_A           76 ----KSLLKVDLYGAVKLMQAAEKA-EVKRFILLSTIFSLQPEK---WIG----AGFDALKDYYIAKHFADLYLT--KET  141 (219)
T ss_dssp             ----SSCCCCCCHHHHHHHHHHHHT-TCCEEEEECCTTTTCGGG---CCS----HHHHHTHHHHHHHHHHHHHHH--HSC
T ss_pred             ----CCcEeEeHHHHHHHHHHHHHh-CCCEEEEECcccccCCCc---ccc----cccccccHHHHHHHHHHHHHH--hcc
Confidence                347889999999999999997 789999999988776432   223    223346889999999999986  347


Q ss_pred             CCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC-CCCeEEecCCCC
Q 019878          160 GLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR-SGERYLLTGENA  238 (334)
Q Consensus       160 g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-~g~~~~i~g~~~  238 (334)
                      |++++++||+.+||+.....-                 .  .++..++|++++|+|+++..++.++. .|++||+++...
T Consensus       142 ~i~~~ilrp~~v~g~~~~~~~-----------------~--~~~~~~~~i~~~Dva~~i~~~l~~~~~~g~~~~i~~g~~  202 (219)
T 3dqp_A          142 NLDYTIIQPGALTEEEATGLI-----------------D--INDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNGKT  202 (219)
T ss_dssp             CCEEEEEEECSEECSCCCSEE-----------------E--ESSSCCCCEEHHHHHHHHHHHHTCGGGTTEEEEEEECSE
T ss_pred             CCcEEEEeCceEecCCCCCcc-----------------c--cCCCcCCcccHHHHHHHHHHHHhCccccCcEEEeCCCCc
Confidence            999999999999998643210                 0  13678899999999999999999865 488999976569


Q ss_pred             CHHHHHH
Q 019878          239 SFMQIFD  245 (334)
Q Consensus       239 s~~e~~~  245 (334)
                      ++.|+.+
T Consensus       203 ~~~e~~~  209 (219)
T 3dqp_A          203 AIKEALE  209 (219)
T ss_dssp             EHHHHHH
T ss_pred             cHHHHHH
Confidence            9999875

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=100.00  E-value=1.5e-35  Score=264.41  Aligned_cols=229  Identities=20%  Similarity=0.204  Sum_probs=188.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC-CC-eEEEEEcCCCCCCCCC---CCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ-GH-SVRALVRRTSDISGLP---SEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~-g~-~V~~~~r~~~~~~~~~---~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      |+|||||||||||++|++.|+++ |+ +|++++|++.+...+.   ...+++++.+|++|.+.+.++++++|+|||+||.
T Consensus        22 k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~Aa~  101 (344)
T 2gn4_A           22 QTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHAAAL  101 (344)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEECCCC
Confidence            57999999999999999999999 97 9999999864321110   0137999999999999999999999999999997


Q ss_pred             cCC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHH
Q 019878           76 VEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIA  153 (334)
Q Consensus        76 ~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~  153 (334)
                      ...  ++.++...+++|+.++.+++++|.+. ++++||++||..++.+                 .+.|+.+|+++|.++
T Consensus       102 ~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~-~v~~~V~~SS~~~~~p-----------------~~~Y~~sK~~~E~~~  163 (344)
T 2gn4_A          102 KHVPIAEYNPLECIKTNIMGASNVINACLKN-AISQVIALSTDKAANP-----------------INLYGATKLCSDKLF  163 (344)
T ss_dssp             CCHHHHHHSHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEECCGGGSSC-----------------CSHHHHHHHHHHHHH
T ss_pred             CCCCchhcCHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEecCCccCCC-----------------ccHHHHHHHHHHHHH
Confidence            432  23456788999999999999999998 7999999999765421                 377999999999999


Q ss_pred             HHHhh----cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCCCC
Q 019878          154 LQAAS----EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGE  229 (334)
Q Consensus       154 ~~~~~----~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g~  229 (334)
                      +.+..    .|++++++||+++||++.    +.++.+......+..+....+++..++|+|++|+|++++.+++++..|+
T Consensus       164 ~~~~~~~~~~g~~~~~vRpg~v~g~~~----~~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~~~~g~  239 (344)
T 2gn4_A          164 VSANNFKGSSQTQFSVVRYGNVVGSRG----SVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMHGGE  239 (344)
T ss_dssp             HHGGGCCCSSCCEEEEECCCEETTCTT----SHHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHHCCSSC
T ss_pred             HHHHHHhCCCCcEEEEEEeccEECCCC----CHHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhhccCCC
Confidence            98764    589999999999999863    3555555555566623233467888999999999999999999877788


Q ss_pred             eEEecCCCCCHHHHHHHHHHHh
Q 019878          230 RYLLTGENASFMQIFDMAAVIT  251 (334)
Q Consensus       230 ~~~i~g~~~s~~e~~~~i~~~~  251 (334)
                      +|+++++.+++.|+++.+.+..
T Consensus       240 ~~~~~~~~~s~~el~~~i~~~~  261 (344)
T 2gn4_A          240 IFVPKIPSMKMTDLAKALAPNT  261 (344)
T ss_dssp             EEEECCCEEEHHHHHHHHCTTC
T ss_pred             EEecCCCcEEHHHHHHHHHHhC
Confidence            9999877899999999998644

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=100.00  E-value=4.3e-35  Score=264.28  Aligned_cols=212  Identities=20%  Similarity=0.204  Sum_probs=183.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPW   79 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~   79 (334)
                      |||||||||||||++|++.|+++|+ +|++++|+                    .|.+.+.++++++|+|||+|+.... 
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~--------------------~d~~~l~~~~~~~d~Vih~a~~~~~-   59 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ--------------------TKEEELESALLKADFIVHLAGVNRP-   59 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT--------------------CCHHHHHHHHHHCSEEEECCCSBCT-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC--------------------CCHHHHHHHhccCCEEEECCcCCCC-
Confidence            9999999999999999999999998 77666554                    6788899999999999999997654 


Q ss_pred             CCCcccchhhhhHHHHHHHHHHHhcCCCc-EEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHhh
Q 019878           80 LPDPSRFFAVNVEGLKNVVQAAKETKTVE-KIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS  158 (334)
Q Consensus        80 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~  158 (334)
                       .++...++.|+.++.+++++|++. +++ +||++||.++|+                  .++|+.+|.++|++++.+.+
T Consensus        60 -~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~Ss~~~~~------------------~~~Y~~sK~~~E~~~~~~~~  119 (369)
T 3st7_A           60 -EHDKEFSLGNVSYLDHVLDILTRN-TKKPAILLSSSIQATQ------------------DNPYGESKLQGEQLLREYAE  119 (369)
T ss_dssp             -TCSTTCSSSCCBHHHHHHHHHTTC-SSCCEEEEEEEGGGGS------------------CSHHHHHHHHHHHHHHHHHH
T ss_pred             -CCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEeCchhhcC------------------CCCchHHHHHHHHHHHHHHH
Confidence             467778999999999999999998 566 999999999987                  16799999999999999875


Q ss_pred             -cCCCEEEEecCceecCCCCCc-hhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCC--CCeEEec
Q 019878          159 -EGLPIVPVYPGVIYGPGKLTT-GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRS--GERYLLT  234 (334)
Q Consensus       159 -~g~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~--g~~~~i~  234 (334)
                       .|++++++||+++||++..+. .+++..++.....+....+ +++++.++|+|++|+|+++..++.++..  +++||++
T Consensus       120 ~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i~  198 (369)
T 3st7_A          120 EYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQV-NDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVP  198 (369)
T ss_dssp             HHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCC-SCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEECCS
T ss_pred             HhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEe-cCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceEEeC
Confidence             599999999999999976432 3566777777776766544 5788999999999999999999998876  8999997


Q ss_pred             -CCCCCHHHHHHHHHHHhCCC
Q 019878          235 -GENASFMQIFDMAAVITGTS  254 (334)
Q Consensus       235 -g~~~s~~e~~~~i~~~~g~~  254 (334)
                       ++.+|+.|+++.+.+..|.+
T Consensus       199 ~~~~~s~~e~~~~~~~~~g~~  219 (369)
T 3st7_A          199 NVFKVTLGEIVDLLYKFKQSR  219 (369)
T ss_dssp             CCEEEEHHHHHHHHHHHHHHH
T ss_pred             CCCceeHHHHHHHHHHHhCCC
Confidence             57899999999999998865

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=100.00  E-value=3.5e-34  Score=246.89  Aligned_cols=200  Identities=19%  Similarity=0.176  Sum_probs=166.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLP   81 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~~   81 (334)
                      +|||||||||||++|++.|+++|++|++++|++.+..  .  .+++++.+|++|.+.+.++++++|+|||+|+...  ..
T Consensus         4 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~--~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~--~~   77 (267)
T 3ay3_A            4 RLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA--E--AHEEIVACDLADAQAVHDLVKDCDGIIHLGGVSV--ER   77 (267)
T ss_dssp             EEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC--C--TTEEECCCCTTCHHHHHHHHTTCSEEEECCSCCS--CC
T ss_pred             eEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc--C--CCccEEEccCCCHHHHHHHHcCCCEEEECCcCCC--CC
Confidence            7999999999999999999999999999999876422  2  3689999999999999999999999999999752  24


Q ss_pred             CcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCC-CccCCCCCccccccccChHHHHHHHHHHHHHHHhh-c
Q 019878           82 DPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD-GYIADENQVHEEKYFCTQYERSKAVADKIALQAAS-E  159 (334)
Q Consensus        82 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~-~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~  159 (334)
                      ++...+++|+.++.++++++++. ++++||++||..+|+... ..+.+|+.+..+   .+.|+.+|..+|.+++.+.+ +
T Consensus        78 ~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~---~~~Y~~sK~~~e~~~~~~~~~~  153 (267)
T 3ay3_A           78 PWNDILQANIIGAYNLYEAARNL-GKPRIVFASSNHTIGYYPRTTRIDTEVPRRP---DSLYGLSKCFGEDLASLYYHKF  153 (267)
T ss_dssp             CHHHHHHHTHHHHHHHHHHHHHT-TCCEEEEEEEGGGSTTSBTTSCBCTTSCCCC---CSHHHHHHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCHHHhCCCCCCCCCCCCCCCCC---CChHHHHHHHHHHHHHHHHHHc
Confidence            55678899999999999999987 689999999999998643 345566654433   58999999999999988764 6


Q ss_pred             CCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCC-CCeEEecC
Q 019878          160 GLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRS-GERYLLTG  235 (334)
Q Consensus       160 g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~-g~~~~i~g  235 (334)
                      |++++++||+.+|+...                        .++..++|+|++|+|+++..+++++.. ..+|++.+
T Consensus       154 gi~~~~lrp~~v~~~~~------------------------~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~  206 (267)
T 3ay3_A          154 DIETLNIRIGSCFPKPK------------------------DARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYGAS  206 (267)
T ss_dssp             CCCEEEEEECBCSSSCC------------------------SHHHHHHBCCHHHHHHHHHHHHHSSCCCEEEEEECC
T ss_pred             CCCEEEEeceeecCCCC------------------------CCCeeeccccHHHHHHHHHHHHhCCCCCceeEecCC
Confidence            99999999999994210                        122356899999999999999998754 46777753

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=100.00  E-value=6.2e-34  Score=254.49  Aligned_cols=288  Identities=15%  Similarity=0.127  Sum_probs=205.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC-CCC-----CCCCeEEEEcCCCChhhHHHHhc--CCCEEEEe
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-GLP-----SEGALELVYGDVTDYRSLVDACF--GCHVIFHT   72 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~-----~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vih~   72 (334)
                      |+|||||||||||++|++.|+++|++|++++|++.... ...     ...+++++.+|+.|.+++.++++  ++|+|||+
T Consensus        11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~~   90 (346)
T 3i6i_A           11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVST   90 (346)
T ss_dssp             CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEEC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEEC
Confidence            57999999999999999999999999999999873211 000     01379999999999999999999  99999999


Q ss_pred             ccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHH
Q 019878           73 AALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKI  152 (334)
Q Consensus        73 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~  152 (334)
                      |+.             .|+.++.+++++|++.+.+++||+ |   +||..    .+|..+..+   .+.|+.+|+.+|++
T Consensus        91 a~~-------------~n~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~----~~e~~~~~p---~~~y~~sK~~~e~~  146 (346)
T 3i6i_A           91 VGG-------------ESILDQIALVKAMKAVGTIKRFLP-S---EFGHD----VNRADPVEP---GLNMYREKRRVRQL  146 (346)
T ss_dssp             CCG-------------GGGGGHHHHHHHHHHHCCCSEEEC-S---CCSSC----TTTCCCCTT---HHHHHHHHHHHHHH
T ss_pred             Cch-------------hhHHHHHHHHHHHHHcCCceEEee-c---ccCCC----CCccCcCCC---cchHHHHHHHHHHH
Confidence            985             388999999999999843999986 4   45532    223332222   47899999999999


Q ss_pred             HHHHhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC-CCCeE
Q 019878          153 ALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR-SGERY  231 (334)
Q Consensus       153 ~~~~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-~g~~~  231 (334)
                      +++   .|++++++||+.++|........   . ......++...+++++++.++|+|++|+|++++.++..+. .+++|
T Consensus       147 l~~---~g~~~tivrpg~~~g~~~~~~~~---~-~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~  219 (346)
T 3i6i_A          147 VEE---SGIPFTYICCNSIASWPYYNNIH---P-SEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSV  219 (346)
T ss_dssp             HHH---TTCCBEEEECCEESSCCCSCC---------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGGTTEEE
T ss_pred             HHH---cCCCEEEEEecccccccCccccc---c-ccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccccCeEE
Confidence            887   78999999999999975322111   1 1111245556678899999999999999999999999875 47888


Q ss_pred             Eec--CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHH-H-----HHhhcc-ceech-
Q 019878          232 LLT--GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPT-V-----HVLAHQ-WAYSC-  301 (334)
Q Consensus       232 ~i~--g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~-~~~d~-  301 (334)
                      ++.  |+.+|+.|+++.+.+.+|.+.+...+|.........         . .+ ..... .     ....+. ..++. 
T Consensus       220 ~i~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~---------~-~~-~p~~~~~~~~~~~~~~g~~~~~~~~  288 (346)
T 3i6i_A          220 HFRPSCNCLNINELASVWEKKIGRTLPRVTVTEDDLLAAAG---------E-NI-IPQSVVAAFTHDIFIKGCQVNFSID  288 (346)
T ss_dssp             ECCCGGGEECHHHHHHHHHHHHTSCCCEEEECHHHHHHHHH---------T-CC-TTHHHHHHHHHHHHTTCTTTSSCCC
T ss_pred             EEeCCCCCCCHHHHHHHHHHHHCCCCceEecCHHHHHHHHh---------c-CC-ChhhhHHHHHHHHhccCCCcccccC
Confidence            886  577999999999999999998887777654321110         0 00 00000 0     000000 00111 


Q ss_pred             ----HHHHHhc-CCCCCCHHHHHHHHHHHHHhcC
Q 019878          302 ----VKAKTEL-GYNPRSLKEGLQEVLPWLRSSG  330 (334)
Q Consensus       302 ----~k~~~~l-G~~p~~~~e~i~~~~~~~~~~~  330 (334)
                          .++.+.+ ++++++++|.++++++|+.++.
T Consensus       289 ~~~~~~~~~~~p~~~~t~~~e~l~~~~~~~~~~~  322 (346)
T 3i6i_A          289 GPEDVEVTTLYPEDSFRTVEECFGEYIVKMEEKQ  322 (346)
T ss_dssp             STTEEEHHHHSTTCCCCCHHHHHHHHHCC-----
T ss_pred             CCCcccHHHhCCCCCcCcHHHHHHHHHHHhhccc
Confidence                1233333 7888899999999999998753

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=100.00  E-value=4.5e-34  Score=250.27  Aligned_cols=277  Identities=16%  Similarity=0.114  Sum_probs=205.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCC--CCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDIS--GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVE   77 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~--~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~   77 (334)
                      |+||||||||+||+++++.|+++| ++|++++|++.+..  .+.. .+++++.+|+.|++++.++++++|+|||+|+...
T Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~-~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~   84 (299)
T 2wm3_A            6 KLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRL-QGAEVVQGDQDDQVIMELALNGAYATFIVTNYWE   84 (299)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHH-TTCEEEECCTTCHHHHHHHHTTCSEEEECCCHHH
T ss_pred             CEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHH-CCCEEEEecCCCHHHHHHHHhcCCEEEEeCCCCc
Confidence            469999999999999999999998 99999999876421  1111 2689999999999999999999999999998532


Q ss_pred             CCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHh
Q 019878           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA  157 (334)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~  157 (334)
                      .      ...+.|+.++.+++++|++. ++++||++||..+|+...+.            +.++|+.+|..+|++++.  
T Consensus        85 ~------~~~~~~~~~~~~~~~aa~~~-gv~~iv~~S~~~~~~~~~~~------------~~~~y~~sK~~~e~~~~~--  143 (299)
T 2wm3_A           85 S------CSQEQEVKQGKLLADLARRL-GLHYVVYSGLENIKKLTAGR------------LAAAHFDGKGEVEEYFRD--  143 (299)
T ss_dssp             H------TCHHHHHHHHHHHHHHHHHH-TCSEEEECCCCCHHHHTTTS------------CCCHHHHHHHHHHHHHHH--
T ss_pred             c------ccchHHHHHHHHHHHHHHHc-CCCEEEEEcCccccccCCCc------------ccCchhhHHHHHHHHHHH--
Confidence            1      12457889999999999998 78999999988887643211            136799999999999876  


Q ss_pred             hcCCCEEEEecCceecCCCCCchhHHHHHHHHHH-cCCC-CccccCCCCceeeeeHHHHHHHHHHHhhcC--CCCCeEEe
Q 019878          158 SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERF-NGRL-PGYIGYGNDRFSFCHVDDVVDGHIAAMEKG--RSGERYLL  233 (334)
Q Consensus       158 ~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~--~~g~~~~i  233 (334)
                       .|++++++||+.+||+....   +    +.... .+.. ......++..++|+|++|+|+++..++.++  ..|++|++
T Consensus       144 -~gi~~~ilrp~~~~~~~~~~---~----~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~  215 (299)
T 2wm3_A          144 -IGVPMTSVRLPCYFENLLSH---F----LPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGL  215 (299)
T ss_dssp             -HTCCEEEEECCEEGGGGGTT---T----CCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEEC
T ss_pred             -CCCCEEEEeecHHhhhchhh---c----CCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhhCCeEEEe
Confidence             68999999999999974210   0    00011 2211 112234678899999999999999999864  26889999


Q ss_pred             cCCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHH-----HHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhc
Q 019878          234 TGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYG-----WILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTEL  308 (334)
Q Consensus       234 ~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l  308 (334)
                      +|+.+|+.|+++.+.+.+|++.+...+|.+.....+     .+.++...+               ......+ ....+.+
T Consensus       216 ~g~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---------------~~~~~~~-~~~~~~~  279 (299)
T 2wm3_A          216 STCRHTAEEYAALLTKHTRKVVHDAKMTPEDYEKLGFPGARDLANMFRFY---------------ALRPDRD-IELTLRL  279 (299)
T ss_dssp             CSEEECHHHHHHHHHHHHSSCEEECCCCTHHHHTTCSTTHHHHHHHHHHH---------------TTCCCCC-HHHHHHH
T ss_pred             eeccCCHHHHHHHHHHHHCCCceeEecCHHHHHhcCCCcHHHHHHHHHHH---------------HhcCCCC-HHHHHHh
Confidence            888899999999999999998877777766543210     011111110               0111112 2344578


Q ss_pred             CCCCCCHHHHHHHHH
Q 019878          309 GYNPRSLKEGLQEVL  323 (334)
Q Consensus       309 G~~p~~~~e~i~~~~  323 (334)
                      |.+|+++++.+++..
T Consensus       280 g~~~~~~~~~~~~~~  294 (299)
T 2wm3_A          280 NPKALTLDQWLEQHK  294 (299)
T ss_dssp             CTTCCCHHHHHHHHG
T ss_pred             CCCCCCHHHHHHhCh
Confidence            999999999998764

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=100.00  E-value=3.4e-34  Score=242.46  Aligned_cols=212  Identities=16%  Similarity=0.191  Sum_probs=172.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCe-EEEEcCCCChhhHHHHhcCCCEEEEeccccCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGAL-ELVYGDVTDYRSLVDACFGCHVIFHTAALVEPW   79 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v-~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~   79 (334)
                      |+||||||||+||+++++.|+++|++|++++|++++...+.. .++ +++.+|++  +.+.+++.++|+|||+||.... 
T Consensus        22 ~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~-~~~~~~~~~Dl~--~~~~~~~~~~D~vi~~ag~~~~-   97 (236)
T 3e8x_A           22 MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE-RGASDIVVANLE--EDFSHAFASIDAVVFAAGSGPH-   97 (236)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-TTCSEEEECCTT--SCCGGGGTTCSEEEECCCCCTT-
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh-CCCceEEEcccH--HHHHHHHcCCCEEEECCCCCCC-
Confidence            789999999999999999999999999999998765433222 268 99999999  7788888999999999997543 


Q ss_pred             CCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHhhc
Q 019878           80 LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE  159 (334)
Q Consensus        80 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~  159 (334)
                       .++...+++|+.++.+++++|++. ++++||++||...+.+.       ..+    .+.+.|+.+|.++|.+++   +.
T Consensus        98 -~~~~~~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS~~~~~~~-------~~~----~~~~~Y~~sK~~~e~~~~---~~  161 (236)
T 3e8x_A           98 -TGADKTILIDLWGAIKTIQEAEKR-GIKRFIMVSSVGTVDPD-------QGP----MNMRHYLVAKRLADDELK---RS  161 (236)
T ss_dssp             -SCHHHHHHTTTHHHHHHHHHHHHH-TCCEEEEECCTTCSCGG-------GSC----GGGHHHHHHHHHHHHHHH---HS
T ss_pred             -CCccccchhhHHHHHHHHHHHHHc-CCCEEEEEecCCCCCCC-------CCh----hhhhhHHHHHHHHHHHHH---HC
Confidence             567788999999999999999998 68999999995544321       111    235789999999999887   48


Q ss_pred             CCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcC-CCCCeEEecCCCC
Q 019878          160 GLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG-RSGERYLLTGENA  238 (334)
Q Consensus       160 g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~-~~g~~~~i~g~~~  238 (334)
                      |++++++||+.+||+.....                ......+...++++|++|+|+++..+++++ ..|++|++++...
T Consensus       162 gi~~~~lrpg~v~~~~~~~~----------------~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~v~~~~~  225 (236)
T 3e8x_A          162 SLDYTIVRPGPLSNEESTGK----------------VTVSPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVLNGDT  225 (236)
T ss_dssp             SSEEEEEEECSEECSCCCSE----------------EEEESSCSCCCCCEEHHHHHHHHHHHTTCGGGTTEEEEEEECSE
T ss_pred             CCCEEEEeCCcccCCCCCCe----------------EEeccCCCcccCcEeHHHHHHHHHHHhcCccccCCeEEEeCCCc
Confidence            99999999999999864221                112234455789999999999999999987 4689999975579


Q ss_pred             CHHHHHHHHH
Q 019878          239 SFMQIFDMAA  248 (334)
Q Consensus       239 s~~e~~~~i~  248 (334)
                      ++.|+++.++
T Consensus       226 ~~~e~~~~i~  235 (236)
T 3e8x_A          226 PIAKVVEQLG  235 (236)
T ss_dssp             EHHHHHHTC-
T ss_pred             CHHHHHHHhc
Confidence            9999998764

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=100.00  E-value=4.2e-33  Score=240.07  Aligned_cols=220  Identities=19%  Similarity=0.143  Sum_probs=180.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLP   81 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~~   81 (334)
                      +||||||+|+||+++++.|+++|++|++++|++.+..    ..+++++.+|++|.+++.++++++|+|||+||..  ...
T Consensus         5 ~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~--~~~   78 (267)
T 3rft_A            5 RLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----GPNEECVQCDLADANAVNAMVAGCDGIVHLGGIS--VEK   78 (267)
T ss_dssp             EEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----CTTEEEEECCTTCHHHHHHHHTTCSEEEECCSCC--SCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCCc--CcC
Confidence            5999999999999999999999999999999986544    2379999999999999999999999999999974  335


Q ss_pred             CcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCC-CccCCCCCccccccccChHHHHHHHHHHHHHHHh-hc
Q 019878           82 DPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD-GYIADENQVHEEKYFCTQYERSKAVADKIALQAA-SE  159 (334)
Q Consensus        82 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~-~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~  159 (334)
                      +++..+++|+.++.++++++++. ++++||++||..+|+... ..+.+|+.+..+   .+.|+.||.++|.+++.+. ++
T Consensus        79 ~~~~~~~~N~~g~~~l~~a~~~~-~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~---~~~Y~~sK~~~e~~~~~~a~~~  154 (267)
T 3rft_A           79 PFEQILQGNIIGLYNLYEAARAH-GQPRIVFASSNHTIGYYPQTERLGPDVPARP---DGLYGVSKCFGENLARMYFDKF  154 (267)
T ss_dssp             CHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGGTTSBTTSCBCTTSCCCC---CSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEEcchHHhCCCCCCCCCCCCCCCCC---CChHHHHHHHHHHHHHHHHHHh
Confidence            66788999999999999999997 689999999999997543 344555554443   5889999999999998876 46


Q ss_pred             CCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCCC-CeEEe-cCCC
Q 019878          160 GLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSG-ERYLL-TGEN  237 (334)
Q Consensus       160 g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g-~~~~i-~g~~  237 (334)
                      |++++++||+.+||+.                        +++...++|+|++|+++++..++..+..+ .++++ +++.
T Consensus       155 g~~~~~vr~~~v~~~~------------------------~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~~~~~~s~~~  210 (267)
T 3rft_A          155 GQETALVRIGSCTPEP------------------------NNYRMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGASAND  210 (267)
T ss_dssp             CCCEEEEEECBCSSSC------------------------CSTTHHHHBCCHHHHHHHHHHHHHCSCCCSCEEEECCCCT
T ss_pred             CCeEEEEEeecccCCC------------------------CCCCceeeEEcHHHHHHHHHHHHhCCCCCceEEEEeCCCC
Confidence            9999999999999862                        22345678999999999999999987654 45666 5676


Q ss_pred             CCHHHHHHHHHHHhCCCCCc
Q 019878          238 ASFMQIFDMAAVITGTSRPR  257 (334)
Q Consensus       238 ~s~~e~~~~i~~~~g~~~~~  257 (334)
                      .++.++...  +.+|..++.
T Consensus       211 ~~~~~~~~~--~~~g~~p~~  228 (267)
T 3rft_A          211 AGWWDNSHL--GFLGWKPKD  228 (267)
T ss_dssp             TCCBCCGGG--GGGCCCCCC
T ss_pred             CCcccChhH--HHCCCCCCC
Confidence            776666433  566775544

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=100.00  E-value=4.7e-33  Score=233.53  Aligned_cols=214  Identities=14%  Similarity=0.119  Sum_probs=160.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~   80 (334)
                      |||||||||||||++|++.|+++|++|++++|++.+...+.. .+++++.+|++|.+.  +++.++|+|||+||...   
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~---   74 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLG-ATVATLVKEPLVLTE--ADLDSVDAVVDALSVPW---   74 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTC-TTSEEEECCGGGCCH--HHHTTCSEEEECCCCCT---
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccC-CCceEEecccccccH--hhcccCCEEEECCccCC---
Confidence            999999999999999999999999999999998765433222 379999999999987  78889999999999751   


Q ss_pred             CCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCc---cCCCCCccccccccChHHHHHHHHHHHHHHHh
Q 019878           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGY---IADENQVHEEKYFCTQYERSKAVADKIALQAA  157 (334)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~---~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~  157 (334)
                        .......|+.++.+++++|++. + +++|++||.+++......   +.++...+   .+.+.|+.+|..+|.+ ..+.
T Consensus        75 --~~~~~~~n~~~~~~l~~a~~~~-~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~---~~~~~y~~sK~~~e~~-~~~~  146 (224)
T 3h2s_A           75 --GSGRGYLHLDFATHLVSLLRNS-D-TLAVFILGSASLAMPGADHPMILDFPESA---ASQPWYDGALYQYYEY-QFLQ  146 (224)
T ss_dssp             --TSSCTHHHHHHHHHHHHTCTTC-C-CEEEEECCGGGSBCTTCSSCGGGGCCGGG---GGSTTHHHHHHHHHHH-HHHT
T ss_pred             --CcchhhHHHHHHHHHHHHHHHc-C-CcEEEEecceeeccCCCCccccccCCCCC---ccchhhHHHHHHHHHH-HHHH
Confidence              1234678999999999999998 5 899999998765543321   22222222   1257899999999954 4444


Q ss_pred             -hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC-CCCeEEecC
Q 019878          158 -SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR-SGERYLLTG  235 (334)
Q Consensus       158 -~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-~g~~~~i~g  235 (334)
                       ..|++++++||+.+||++....  +        ..+....  ..+...++++|++|+|++++.+++++. .|++|++++
T Consensus       147 ~~~~i~~~ivrp~~v~g~~~~~~--~--------~~~~~~~--~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~~~  214 (224)
T 3h2s_A          147 MNANVNWIGISPSEAFPSGPATS--Y--------VAGKDTL--LVGEDGQSHITTGNMALAILDQLEHPTAIRDRIVVRD  214 (224)
T ss_dssp             TCTTSCEEEEEECSBCCCCCCCC--E--------EEESSBC--CCCTTSCCBCCHHHHHHHHHHHHHSCCCTTSEEEEEE
T ss_pred             hcCCCcEEEEcCccccCCCcccC--c--------eeccccc--ccCCCCCceEeHHHHHHHHHHHhcCccccCCEEEEec
Confidence             5799999999999999964321  1        0111111  123456799999999999999999876 589999976


Q ss_pred             -CCCCH
Q 019878          236 -ENASF  240 (334)
Q Consensus       236 -~~~s~  240 (334)
                       +..+.
T Consensus       215 ~~~~~~  220 (224)
T 3h2s_A          215 ADLEHH  220 (224)
T ss_dssp             CC----
T ss_pred             Ccchhc
Confidence             43433

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=100.00  E-value=4.9e-34  Score=255.22  Aligned_cols=231  Identities=22%  Similarity=0.192  Sum_probs=179.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC--CCCCCCCCeEEEEcC-CCChhhHHHHhcCCCEEEEeccccC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI--SGLPSEGALELVYGD-VTDYRSLVDACFGCHVIFHTAALVE   77 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~v~~~~~D-l~d~~~~~~~~~~~d~vih~a~~~~   77 (334)
                      |+|||||||||||++|++.|+++|++|++++|++++.  ..+...++++++.+| ++|.+++.++++++|+|||+++...
T Consensus         6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~~~   85 (352)
T 1xgk_A            6 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTSQA   85 (352)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCSTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCCCC
Confidence            5799999999999999999999999999999987643  112222368999999 9999999999999999999987421


Q ss_pred             CCCCCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEecccc--eeccCCCccCCCCCccccccccChHHHHHHHHHHHHH
Q 019878           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFF--ALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIAL  154 (334)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~Ss~~--v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~  154 (334)
                               ...|..+ ++++++|++. + +++||++||.+  .|+.           .    +.++|+.+|..+|++++
T Consensus        86 ---------~~~~~~~-~~l~~aa~~~-g~v~~~V~~SS~~~~~~~~-----------~----~~~~y~~sK~~~E~~~~  139 (352)
T 1xgk_A           86 ---------GDEIAIG-KDLADAAKRA-GTIQHYIYSSMPDHSLYGP-----------W----PAVPMWAPKFTVENYVR  139 (352)
T ss_dssp             ---------SCHHHHH-HHHHHHHHHH-SCCSEEEEEECCCGGGTSS-----------C----CCCTTTHHHHHHHHHHH
T ss_pred             ---------cHHHHHH-HHHHHHHHHc-CCccEEEEeCCccccccCC-----------C----CCccHHHHHHHHHHHHH
Confidence                     1347776 9999999998 6 89999999975  3321           1    12669999999999998


Q ss_pred             HHhhcCCCEEEEecCceecCCCCCchhHHHHHHHHH-HcCCCC--ccccCCCCceeeeeH-HHHHHHHHHHhhcCC---C
Q 019878          155 QAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIER-FNGRLP--GYIGYGNDRFSFCHV-DDVVDGHIAAMEKGR---S  227 (334)
Q Consensus       155 ~~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~i~v-~D~a~a~~~~~~~~~---~  227 (334)
                      .   .|++++++||+ +||++....  . ..++... ...+.+  .+++++++.++|+|+ +|+|+++..++.++.   .
T Consensus       140 ~---~gi~~~ivrpg-~~g~~~~~~--~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~  212 (352)
T 1xgk_A          140 Q---LGLPSTFVYAG-IYNNNFTSL--P-YPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWN  212 (352)
T ss_dssp             T---SSSCEEEEEEC-EEGGGCBSS--S-CSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHT
T ss_pred             H---cCCCEEEEecc-eecCCchhc--c-cccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhC
Confidence            6   58999999987 788764221  0 0111000 112222  235667889999999 899999999998752   5


Q ss_pred             CCeEEecCCCCCHHHHHHHHHHHhCCCCCcccccHHH
Q 019878          228 GERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWL  264 (334)
Q Consensus       228 g~~~~i~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~  264 (334)
                      |++||++++.+|+.|+++.+.+.+|.+.+..++|.|+
T Consensus       213 g~~~~l~~~~~s~~e~~~~i~~~~G~~~~~~~vp~~~  249 (352)
T 1xgk_A          213 GHRIALTFETLSPVQVCAAFSRALNRRVTYVQVPKVE  249 (352)
T ss_dssp             TCEEEECSEEECHHHHHHHHHHHHTSCEEEEECSSCC
T ss_pred             CeEEEEecCCCCHHHHHHHHHHHHCCCCceEECCHHH
Confidence            8999999877999999999999999987777777553

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=100.00  E-value=1.3e-32  Score=230.20  Aligned_cols=215  Identities=18%  Similarity=0.267  Sum_probs=148.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~   80 (334)
                      |||||||||||||++|++.|+++|++|++++|++++...+.  ++++++.+|++|.+.  +.+.++|+|||+||...   
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~---   73 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--KDINILQKDIFDLTL--SDLSDQNVVVDAYGISP---   73 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--SSSEEEECCGGGCCH--HHHTTCSEEEECCCSST---
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--CCCeEEeccccChhh--hhhcCCCEEEECCcCCc---
Confidence            99999999999999999999999999999999976544333  379999999999987  78889999999999632   


Q ss_pred             CCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCC-ccCCCCCccccccccChHHHHHHHHHHHHHHHh-h
Q 019878           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG-YIADENQVHEEKYFCTQYERSKAVADKIALQAA-S  158 (334)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~-~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~  158 (334)
                          .....|+.++.+++++|++. +++++|++||..++..... .+..++.+..   +.+.|+.+|..+|.+..... .
T Consensus        74 ----~~~~~~~~~~~~l~~a~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~---~~~~y~~~k~~~e~~~~~~~~~  145 (221)
T 3ew7_A           74 ----DEAEKHVTSLDHLISVLNGT-VSPRLLVVGGAASLQIDEDGNTLLESKGLR---EAPYYPTARAQAKQLEHLKSHQ  145 (221)
T ss_dssp             ----TTTTSHHHHHHHHHHHHCSC-CSSEEEEECCCC----------------------CCCSCCHHHHHHHHHHHHTTT
T ss_pred             ----cccchHHHHHHHHHHHHHhc-CCceEEEEecceEEEcCCCCccccccCCCC---CHHHHHHHHHHHHHHHHHHhhc
Confidence                13567999999999999997 6899999999877654332 2333333322   24679999999998733333 5


Q ss_pred             cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC-CCCeEEecCC-
Q 019878          159 EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR-SGERYLLTGE-  236 (334)
Q Consensus       159 ~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-~g~~~~i~g~-  236 (334)
                      .|++++++||+.+||++... +.+       ...+......+.+   .++++++|+|++++.+++++. .|++||+++. 
T Consensus       146 ~gi~~~ivrp~~v~g~~~~~-~~~-------~~~~~~~~~~~~~---~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~  214 (221)
T 3ew7_A          146 AEFSWTYISPSAMFEPGERT-GDY-------QIGKDHLLFGSDG---NSFISMEDYAIAVLDEIERPNHLNEHFTVAGKL  214 (221)
T ss_dssp             TTSCEEEEECSSCCCCC--------------------------------CCCHHHHHHHHHHHHHSCSCTTSEEECCC--
T ss_pred             cCccEEEEeCcceecCCCcc-Cce-------EeccccceecCCC---CceEeHHHHHHHHHHHHhCccccCCEEEECCCC
Confidence            79999999999999984321 111       0112222233332   379999999999999999876 5999999874 


Q ss_pred             CCCHH
Q 019878          237 NASFM  241 (334)
Q Consensus       237 ~~s~~  241 (334)
                      ..+..
T Consensus       215 ~~~~~  219 (221)
T 3ew7_A          215 EHHHH  219 (221)
T ss_dssp             -----
T ss_pred             ccccc
Confidence            34443

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.97  E-value=8.5e-32  Score=229.86  Aligned_cols=226  Identities=19%  Similarity=0.174  Sum_probs=173.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC--CCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ--GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~   78 (334)
                      |+||||||+|+||+++++.|+++  |++|++++|++.+...+.  .+++++.+|++|.+++.++++++|+|||+||....
T Consensus         5 ~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~~   82 (253)
T 1xq6_A            5 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG--GEADVFIGDITDADSINPAFQGIDALVILTSAVPK   82 (253)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTT--CCTTEEECCTTSHHHHHHHHTTCSEEEECCCCCCE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcC--CCeeEEEecCCCHHHHHHHHcCCCEEEEecccccc
Confidence            57999999999999999999999  899999999865433332  26789999999999999999999999999996431


Q ss_pred             --------CCCCc-------ccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHH
Q 019878           79 --------WLPDP-------SRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (334)
Q Consensus        79 --------~~~~~-------~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (334)
                              +..++       ...+++|+.++.++++++++. ++++||++||.+++....        +..+ ...+.|+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~SS~~~~~~~~--------~~~~-~~~~~y~  152 (253)
T 1xq6_A           83 MKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-GVKHIVVVGSMGGTNPDH--------PLNK-LGNGNIL  152 (253)
T ss_dssp             ECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-TCSEEEEEEETTTTCTTC--------GGGG-GGGCCHH
T ss_pred             ccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc-CCCEEEEEcCccCCCCCC--------cccc-ccchhHH
Confidence                    11112       235789999999999999998 689999999988753211        1111 1124588


Q ss_pred             HHHHHHHHHHHHHhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhh
Q 019878          144 RSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAME  223 (334)
Q Consensus       144 ~sK~~~E~~~~~~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~  223 (334)
                      .+|..+|.+++.   .|++++++||+.+||+..... ..        ..+....+++   ..++++|++|+|++++.+++
T Consensus       153 ~sK~~~e~~~~~---~~i~~~~vrpg~v~~~~~~~~-~~--------~~~~~~~~~~---~~~~~~~~~Dva~~~~~~~~  217 (253)
T 1xq6_A          153 VWKRKAEQYLAD---SGTPYTIIRAGGLLDKEGGVR-EL--------LVGKDDELLQ---TDTKTVPRADVAEVCIQALL  217 (253)
T ss_dssp             HHHHHHHHHHHT---SSSCEEEEEECEEECSCSSSS-CE--------EEESTTGGGG---SSCCEEEHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHh---CCCceEEEecceeecCCcchh-hh--------hccCCcCCcC---CCCcEEcHHHHHHHHHHHHc
Confidence            999999998875   799999999999999864211 00        1111111222   23569999999999999998


Q ss_pred             cCC-CCCeEEecC-C---CCCHHHHHHHHHHHhCC
Q 019878          224 KGR-SGERYLLTG-E---NASFMQIFDMAAVITGT  253 (334)
Q Consensus       224 ~~~-~g~~~~i~g-~---~~s~~e~~~~i~~~~g~  253 (334)
                      ++. .|++||+++ +   .+|+.|+++.+.+.+|+
T Consensus       218 ~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~  252 (253)
T 1xq6_A          218 FEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR  252 (253)
T ss_dssp             CGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred             CccccCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence            764 588999964 3   48999999999998876

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.97  E-value=1.9e-32  Score=228.36  Aligned_cols=197  Identities=17%  Similarity=0.199  Sum_probs=159.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC--eEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~   78 (334)
                      |+||||||||+||+++++.|+++|+  +|++++|++.+     ..++++++.+|+.|.+++.+++  +|+|||+|+....
T Consensus         6 ~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-----~~~~~~~~~~D~~~~~~~~~~~--~d~vi~~a~~~~~   78 (215)
T 2a35_A            6 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-----EHPRLDNPVGPLAELLPQLDGS--IDTAFCCLGTTIK   78 (215)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-----CCTTEECCBSCHHHHGGGCCSC--CSEEEECCCCCHH
T ss_pred             ceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-----cCCCceEEeccccCHHHHHHhh--hcEEEECeeeccc
Confidence            5799999999999999999999998  99999998765     1237899999999998888877  9999999997543


Q ss_pred             CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHhh
Q 019878           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS  158 (334)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~  158 (334)
                      ...+++.++++|+.++.++++++++. ++++||++||..+|+..                .+.|+.+|.++|++++.   
T Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~v~~Ss~~~~~~~----------------~~~y~~sK~~~e~~~~~---  138 (215)
T 2a35_A           79 EAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVSALGADAKS----------------SIFYNRVKGELEQALQE---  138 (215)
T ss_dssp             HHSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTTC----------------SSHHHHHHHHHHHHHTT---
T ss_pred             cCCCHHHHHHhhHHHHHHHHHHHHHc-CCCEEEEECCcccCCCC----------------ccHHHHHHHHHHHHHHH---
Confidence            33566778899999999999999997 78999999999998631                26799999999998876   


Q ss_pred             cCCC-EEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCCCCeEEecC
Q 019878          159 EGLP-IVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTG  235 (334)
Q Consensus       159 ~g~~-~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g~~~~i~g  235 (334)
                      .|++ ++++||+.+||++...  .++..+     .+... ..+.  ..++++|++|+|+++..++.++. +++||+++
T Consensus       139 ~~~~~~~~vrp~~v~g~~~~~--~~~~~~-----~~~~~-~~~~--~~~~~i~~~Dva~~~~~~~~~~~-~~~~~i~~  205 (215)
T 2a35_A          139 QGWPQLTIARPSLLFGPREEF--RLAEIL-----AAPIA-RILP--GKYHGIEACDLARALWRLALEEG-KGVRFVES  205 (215)
T ss_dssp             SCCSEEEEEECCSEESTTSCE--EGGGGT-----TCCCC-------CHHHHHHHHHHHHHHHHHHTCCC-SEEEEEEH
T ss_pred             cCCCeEEEEeCceeeCCCCcc--hHHHHH-----HHhhh-hccC--CCcCcEeHHHHHHHHHHHHhcCC-CCceEEcH
Confidence            6899 9999999999997531  121111     11111 1222  37799999999999999999865 78999974

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.97  E-value=6.7e-30  Score=211.33  Aligned_cols=199  Identities=21%  Similarity=0.212  Sum_probs=157.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~   80 (334)
                      |+||||||||+||+++++.|+++|++|++++|++.+..... ..+++++.+|+.|.+++.++++++|+|||+|+....  
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~--   80 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-PRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRND--   80 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-CCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTC--
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccccc-CCceEEEEecCCCHHHHHHHHcCCCEEEECccCCCC--
Confidence            67999999999999999999999999999999877654332 237999999999999999999999999999997443  


Q ss_pred             CCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHhhcC
Q 019878           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEG  160 (334)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g  160 (334)
                      .   ...+.|+.++.++++++++. ++++||++||.++|+.....+.          +.+.|+.+|..+|.+++.   .|
T Consensus        81 ~---~~~~~n~~~~~~~~~~~~~~-~~~~~v~~Ss~~~~~~~~~~~~----------~~~~y~~~K~~~e~~~~~---~~  143 (206)
T 1hdo_A           81 L---SPTTVMSEGARNIVAAMKAH-GVDKVVACTSAFLLWDPTKVPP----------RLQAVTDDHIRMHKVLRE---SG  143 (206)
T ss_dssp             C---SCCCHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCTTCSCG----------GGHHHHHHHHHHHHHHHH---TC
T ss_pred             C---CccchHHHHHHHHHHHHHHh-CCCeEEEEeeeeeccCcccccc----------cchhHHHHHHHHHHHHHh---CC
Confidence            1   22468999999999999998 6899999999999876542211          247899999999998865   78


Q ss_pred             CCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCc-eeeeeHHHHHHHHHHHhhcCC-CCCeEEecCC
Q 019878          161 LPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDR-FSFCHVDDVVDGHIAAMEKGR-SGERYLLTGE  236 (334)
Q Consensus       161 ~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~D~a~a~~~~~~~~~-~g~~~~i~g~  236 (334)
                      ++++++||+.+ +++... ..+.             ...+  ... .+++|++|+|+++..+++++. .|++|+++|+
T Consensus       144 i~~~~lrp~~~-~~~~~~-~~~~-------------~~~~--~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~g  204 (206)
T 1hdo_A          144 LKYVAVMPPHI-GDQPLT-GAYT-------------VTLD--GRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSHQ  204 (206)
T ss_dssp             SEEEEECCSEE-ECCCCC-SCCE-------------EESS--SCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEECC
T ss_pred             CCEEEEeCCcc-cCCCCC-cceE-------------eccc--CCCCCCccCHHHHHHHHHHHhcCccccccceeeecc
Confidence            99999999997 443211 1100             0001  111 589999999999999998865 5889999753

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.97  E-value=3.2e-29  Score=221.32  Aligned_cols=230  Identities=17%  Similarity=0.212  Sum_probs=175.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC-CCCC--CCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-SGLP--SEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~--~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~   78 (334)
                      +||||||||+||+++++.|+++|++|++++|++... ..+.  ...+++++.+|+.|.+++.++++++|+|||+|+..  
T Consensus        13 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~~--   90 (318)
T 2r6j_A           13 KILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFP--   90 (318)
T ss_dssp             CEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCGG--
T ss_pred             eEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCchh--
Confidence            799999999999999999999999999999987521 1010  01378999999999999999999999999999852  


Q ss_pred             CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHhh
Q 019878           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS  158 (334)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~  158 (334)
                                 ++.++.+++++|++.+++++||+ |   +||...    ++.....+  ..+.| .+|..+|++++.   
T Consensus        91 -----------~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p--~~~~y-~sK~~~e~~~~~---  145 (318)
T 2r6j_A           91 -----------QILDQFKILEAIKVAGNIKRFLP-S---DFGVEE----DRINALPP--FEALI-ERKRMIRRAIEE---  145 (318)
T ss_dssp             -----------GSTTHHHHHHHHHHHCCCCEEEC-S---CCSSCT----TTCCCCHH--HHHHH-HHHHHHHHHHHH---
T ss_pred             -----------hhHHHHHHHHHHHhcCCCCEEEe-e---ccccCc----ccccCCCC--cchhH-HHHHHHHHHHHh---
Confidence                       14567899999999833899984 4   355322    11111111  13568 999999998876   


Q ss_pred             cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC-CCCeEEec--C
Q 019878          159 EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR-SGERYLLT--G  235 (334)
Q Consensus       159 ~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-~g~~~~i~--g  235 (334)
                      .|++++++||+.+++.       ++..++.....++...++++++..++|+|++|+++++..++.++. .+++|++.  +
T Consensus       146 ~~~~~~~lr~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~  218 (318)
T 2r6j_A          146 ANIPYTYVSANCFASY-------FINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPST  218 (318)
T ss_dssp             TTCCBEEEECCEEHHH-------HHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGTTEEEECCCGG
T ss_pred             cCCCeEEEEcceehhh-------hhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccccCeEEEecCCC
Confidence            7899999999877653       222222222344445567788899999999999999999998764 46777774  4


Q ss_pred             CCCCHHHHHHHHHHHhCCCCCcccccHHHH
Q 019878          236 ENASFMQIFDMAAVITGTSRPRFCIPLWLI  265 (334)
Q Consensus       236 ~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~  265 (334)
                      +.+|+.|+++.+.+.+|.+.+...+|....
T Consensus       219 ~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~  248 (318)
T 2r6j_A          219 NIITQLELISRWEKKIGKKFKKIHVPEEEI  248 (318)
T ss_dssp             GEEEHHHHHHHHHHHHTCCCEEEEECHHHH
T ss_pred             CccCHHHHHHHHHHHhCCCCceeecCHHHH
Confidence            679999999999999999988877776543

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.97  E-value=7e-30  Score=216.71  Aligned_cols=206  Identities=19%  Similarity=0.160  Sum_probs=162.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC--eEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~   78 (334)
                      |+||||||+|+||+++++.|+++|+  +|++++|++.+...... .++.++.+|++|.+++.++++++|+|||+||....
T Consensus        19 ~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~~   97 (242)
T 2bka_A           19 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAY-KNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTRG   97 (242)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGG-GGCEEEECCGGGGGGGGGGGSSCSEEEECCCCCHH
T ss_pred             CeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccccc-CCceEEecCcCCHHHHHHHhcCCCEEEECCCcccc
Confidence            5799999999999999999999999  99999999876543221 36899999999999999999999999999996432


Q ss_pred             CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHhh
Q 019878           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS  158 (334)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~  158 (334)
                      . .+++.++++|+.++.++++++++. ++++||++||.++|+..                .+.|+.+|...|.+++.   
T Consensus        98 ~-~~~~~~~~~n~~~~~~~~~~~~~~-~~~~iv~~SS~~~~~~~----------------~~~Y~~sK~~~e~~~~~---  156 (242)
T 2bka_A           98 K-AGAEGFVRVDRDYVLKSAELAKAG-GCKHFNLLSSKGADKSS----------------NFLYLQVKGEVEAKVEE---  156 (242)
T ss_dssp             H-HHHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTTC----------------SSHHHHHHHHHHHHHHT---
T ss_pred             c-CCcccceeeeHHHHHHHHHHHHHC-CCCEEEEEccCcCCCCC----------------cchHHHHHHHHHHHHHh---
Confidence            1 234568899999999999999987 68899999999998631                26799999999998876   


Q ss_pred             cCC-CEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCCCCeEEecC
Q 019878          159 EGL-PIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTG  235 (334)
Q Consensus       159 ~g~-~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g~~~~i~g  235 (334)
                      .++ +++++||+.+||+....  ... ..+.....+..+..++    ...+++++|+|++++.++.++..++.|++++
T Consensus       157 ~~~~~~~~vrpg~v~~~~~~~--~~~-~~~~~~~~~~~~~~~~----~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~  227 (242)
T 2bka_A          157 LKFDRYSVFRPGVLLCDRQES--RPG-EWLVRKFFGSLPDSWA----SGHSVPVVTVVRAMLNNVVRPRDKQMELLEN  227 (242)
T ss_dssp             TCCSEEEEEECCEEECTTGGG--SHH-HHHHHHHHCSCCTTGG----GGTEEEHHHHHHHHHHHHTSCCCSSEEEEEH
T ss_pred             cCCCCeEEEcCceecCCCCCC--cHH-HHHHHHhhcccCcccc----CCcccCHHHHHHHHHHHHhCccccCeeEeeH
Confidence            577 59999999999996422  122 2222222233332222    2359999999999999999887777887754

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.97  E-value=3.1e-29  Score=221.72  Aligned_cols=230  Identities=15%  Similarity=0.197  Sum_probs=174.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCC-CCCC-----CCC--CCCCeEEEEcCCCChhhHHHHhcCCCEEEEe
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDIS-----GLP--SEGALELVYGDVTDYRSLVDACFGCHVIFHT   72 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~-----~~~--~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~   72 (334)
                      |+||||||||+||+++++.|+++|++|++++|++ ....     .+.  ...+++++.+|+.|.+++.++++++|+|||+
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~~   84 (321)
T 3c1o_A            5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVISA   84 (321)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             cEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEEC
Confidence            5799999999999999999999999999999986 2110     000  0137899999999999999999999999999


Q ss_pred             ccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHH
Q 019878           73 AALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKI  152 (334)
Q Consensus        73 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~  152 (334)
                      |+...             +.++.+++++|++.+.+++||+ |   +||...    ++.....+  ..+.| .+|..+|++
T Consensus        85 a~~~~-------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p--~~~~y-~sK~~~e~~  140 (321)
T 3c1o_A           85 LPFPM-------------ISSQIHIINAIKAAGNIKRFLP-S---DFGCEE----DRIKPLPP--FESVL-EKKRIIRRA  140 (321)
T ss_dssp             CCGGG-------------SGGGHHHHHHHHHHCCCCEEEC-S---CCSSCG----GGCCCCHH--HHHHH-HHHHHHHHH
T ss_pred             CCccc-------------hhhHHHHHHHHHHhCCccEEec-c---ccccCc----cccccCCC--cchHH-HHHHHHHHH
Confidence            98531             5677899999999833899983 3   455321    11111111  13579 999999998


Q ss_pred             HHHHhhcCCCEEEEecCceecCCCCCchhHHHHHHH---HHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC-CC
Q 019878          153 ALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMI---ERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR-SG  228 (334)
Q Consensus       153 ~~~~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-~g  228 (334)
                      ++.   .|++++++||+.++++       ++..+..   ....++....+++++..++|+|++|+|++++.++.++. .|
T Consensus       141 ~~~---~~~~~~~lrp~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g  210 (321)
T 3c1o_A          141 IEA---AALPYTYVSANCFGAY-------FVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCN  210 (321)
T ss_dssp             HHH---HTCCBEEEECCEEHHH-------HHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGGTT
T ss_pred             HHH---cCCCeEEEEeceeccc-------cccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccccC
Confidence            875   6899999999988764       1222111   01234444566778899999999999999999998764 47


Q ss_pred             CeEEec--CCCCCHHHHHHHHHHHhCCCCCcccccHHH
Q 019878          229 ERYLLT--GENASFMQIFDMAAVITGTSRPRFCIPLWL  264 (334)
Q Consensus       229 ~~~~i~--g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~  264 (334)
                      ++|++.  ++.+|+.|+++.+.+.+|.+.+...+|...
T Consensus       211 ~~~~~~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~  248 (321)
T 3c1o_A          211 RIVIYRPPKNIISQNELISLWEAKSGLSFKKVHMPDEQ  248 (321)
T ss_dssp             EEEECCCGGGEEEHHHHHHHHHHHHTSCCCEEEECHHH
T ss_pred             eEEEEeCCCCcccHHHHHHHHHHHcCCcceeeeCCHHH
Confidence            778885  467999999999999999998887777543

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.97  E-value=1.3e-29  Score=223.33  Aligned_cols=237  Identities=17%  Similarity=0.184  Sum_probs=176.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC--C---CC--CCCCeEEEEcCCCChhhHHHHhcCCCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS--G---LP--SEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~---~~--~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a   73 (334)
                      |+|||||||||||+++++.|+++|++|++++|+.....  .   +.  ...+++++.+|+.|.+++.++++++|+|||+|
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a   84 (313)
T 1qyd_A            5 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISAL   84 (313)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEECC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEECC
Confidence            57999999999999999999999999999999864311  0   00  01378999999999999999999999999999


Q ss_pred             cccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHH
Q 019878           74 ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIA  153 (334)
Q Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~  153 (334)
                      +....         ..|+.++.+++++|++.+.++|||+ |   +||......  +....+   ..+.| .+|..+|+++
T Consensus        85 ~~~~~---------~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~~~--~~~~~p---~~~~y-~sK~~~e~~~  145 (313)
T 1qyd_A           85 AGGVL---------SHHILEQLKLVEAIKEAGNIKRFLP-S---EFGMDPDIM--EHALQP---GSITF-IDKRKVRRAI  145 (313)
T ss_dssp             CCSSS---------STTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSCTTSC--CCCCSS---TTHHH-HHHHHHHHHH
T ss_pred             ccccc---------hhhHHHHHHHHHHHHhcCCCceEEe-c---CCcCCcccc--ccCCCC---CcchH-HHHHHHHHHH
Confidence            86432         2378889999999999833899985 3   455332211  111111   13568 9999999988


Q ss_pred             HHHhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC-CCCeEE
Q 019878          154 LQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR-SGERYL  232 (334)
Q Consensus       154 ~~~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-~g~~~~  232 (334)
                      +.   .|++++++||+.++|+..........   .....++...++++++..++|+|++|+|+++..++.++. .+++|+
T Consensus       146 ~~---~g~~~~ilrp~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~~~~~  219 (313)
T 1qyd_A          146 EA---ASIPYTYVSSNMFAGYFAGSLAQLDG---HMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMY  219 (313)
T ss_dssp             HH---TTCCBCEEECCEEHHHHTTTSSCTTC---CSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEE
T ss_pred             Hh---cCCCeEEEEeceeccccccccccccc---cccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcccCCceEE
Confidence            75   78999999999888742111000000   000123334466778899999999999999999998764 477777


Q ss_pred             ec--CCCCCHHHHHHHHHHHhCCCCCcccccH
Q 019878          233 LT--GENASFMQIFDMAAVITGTSRPRFCIPL  262 (334)
Q Consensus       233 i~--g~~~s~~e~~~~i~~~~g~~~~~~~~~~  262 (334)
                      +.  ++.+|+.|+++.+.+.+|++.+...+|.
T Consensus       220 ~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~  251 (313)
T 1qyd_A          220 IRPPMNILSQKEVIQIWERLSEQNLDKIYISS  251 (313)
T ss_dssp             CCCGGGEEEHHHHHHHHHHHHTCCCEECCBCS
T ss_pred             EeCCCCccCHHHHHHHHHHhcCCCCceEECCH
Confidence            75  3679999999999999999887777764

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.96  E-value=5.1e-29  Score=219.01  Aligned_cols=231  Identities=23%  Similarity=0.302  Sum_probs=173.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC--C-------CCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI--S-------GLPSEGALELVYGDVTDYRSLVDACFGCHVIFH   71 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~-------~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih   71 (334)
                      |+|||||||||||+++++.|+++|++|++++|+....  .       .+. ..+++++.+|++|.+++.++++++|+|||
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~-~~~v~~v~~D~~d~~~l~~~~~~~d~vi~   83 (308)
T 1qyc_A            5 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK-ASGANIVHGSIDDHASLVEAVKNVDVVIS   83 (308)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH-TTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH-hCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence            4799999999999999999999999999999986532  0       011 13789999999999999999999999999


Q ss_pred             eccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHH
Q 019878           72 TAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADK  151 (334)
Q Consensus        72 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~  151 (334)
                      +|+..             ++.++.+++++|++.+.++|||+ |   +||...    ++.....+  ..+.| .+|..+|+
T Consensus        84 ~a~~~-------------~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p--~~~~y-~sK~~~e~  139 (308)
T 1qyc_A           84 TVGSL-------------QIESQVNIIKAIKEVGTVKRFFP-S---EFGNDV----DNVHAVEP--AKSVF-EVKAKVRR  139 (308)
T ss_dssp             CCCGG-------------GSGGGHHHHHHHHHHCCCSEEEC-S---CCSSCT----TSCCCCTT--HHHHH-HHHHHHHH
T ss_pred             CCcch-------------hhhhHHHHHHHHHhcCCCceEee-c---ccccCc----cccccCCc--chhHH-HHHHHHHH
Confidence            99852             14567899999999833899984 4   354322    11111111  13568 99999999


Q ss_pred             HHHHHhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC-CCCe
Q 019878          152 IALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR-SGER  230 (334)
Q Consensus       152 ~~~~~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-~g~~  230 (334)
                      +++.   .|++++++||+.++|.........    ......++...+++++++.++|+|++|+++++..++.++. .+++
T Consensus       140 ~~~~---~~~~~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~  212 (308)
T 1qyc_A          140 AIEA---EGIPYTYVSSNCFAGYFLRSLAQA----GLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKT  212 (308)
T ss_dssp             HHHH---HTCCBEEEECCEEHHHHTTTTTCT----TCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEE
T ss_pred             HHHh---cCCCeEEEEeceeccccccccccc----cccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccccCeE
Confidence            8876   689999999999987532111000    0001123344566788899999999999999999998764 4677


Q ss_pred             EEec--CCCCCHHHHHHHHHHHhCCCCCcccccHH
Q 019878          231 YLLT--GENASFMQIFDMAAVITGTSRPRFCIPLW  263 (334)
Q Consensus       231 ~~i~--g~~~s~~e~~~~i~~~~g~~~~~~~~~~~  263 (334)
                      |++.  ++.+|+.|+++.+.+.+|.+.+...+|..
T Consensus       213 ~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~  247 (308)
T 1qyc_A          213 LYLRLPANTLSLNELVALWEKKIDKTLEKAYVPEE  247 (308)
T ss_dssp             EECCCGGGEEEHHHHHHHHHHHTTSCCEEEEECHH
T ss_pred             EEEeCCCCccCHHHHHHHHHHHhCCCCceEeCCHH
Confidence            8875  36799999999999999999887777753

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.96  E-value=2.2e-28  Score=214.87  Aligned_cols=232  Identities=21%  Similarity=0.226  Sum_probs=172.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC-------CCC--CCCCeEEEEcCCCChhhHHHHhcCCCEEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-------GLP--SEGALELVYGDVTDYRSLVDACFGCHVIFH   71 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~--~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih   71 (334)
                      |+||||||||+||+++++.|+++|++|++++|++....       .+.  ...+++++.+|+.|.+++.++++++|+|||
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~   82 (307)
T 2gas_A            3 NKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVIC   82 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             cEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEEE
Confidence            57999999999999999999999999999999862110       000  013689999999999999999999999999


Q ss_pred             eccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHH
Q 019878           72 TAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADK  151 (334)
Q Consensus        72 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~  151 (334)
                      +|+...             +.++.+++++|++.+.++|||+ |   +||...    ++.....+  ..+.| .+|..+|+
T Consensus        83 ~a~~~~-------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p--~~~~y-~sK~~~e~  138 (307)
T 2gas_A           83 AAGRLL-------------IEDQVKIIKAIKEAGNVKKFFP-S---EFGLDV----DRHDAVEP--VRQVF-EEKASIRR  138 (307)
T ss_dssp             CSSSSC-------------GGGHHHHHHHHHHHCCCSEEEC-S---CCSSCT----TSCCCCTT--HHHHH-HHHHHHHH
T ss_pred             CCcccc-------------cccHHHHHHHHHhcCCceEEee-c---ccccCc----ccccCCCc--chhHH-HHHHHHHH
Confidence            998532             5677899999999833899983 3   455322    11111111  13578 99999999


Q ss_pred             HHHHHhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC-CCCe
Q 019878          152 IALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR-SGER  230 (334)
Q Consensus       152 ~~~~~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-~g~~  230 (334)
                      +++.   .|++++++||+.++++...   .+. ........++...++++++..++|+|++|+|+++..++.++. .+++
T Consensus       139 ~~~~---~~i~~~~lrp~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~~~  211 (307)
T 2gas_A          139 VIEA---EGVPYTYLCCHAFTGYFLR---NLA-QLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKA  211 (307)
T ss_dssp             HHHH---HTCCBEEEECCEETTTTGG---GTT-CTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGGTTEE
T ss_pred             HHHH---cCCCeEEEEcceeeccccc---ccc-ccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccccCce
Confidence            8875   6899999999988875321   110 000001123334456778889999999999999999998764 4677


Q ss_pred             EEec--CCCCCHHHHHHHHHHHhCCCCCcccccHH
Q 019878          231 YLLT--GENASFMQIFDMAAVITGTSRPRFCIPLW  263 (334)
Q Consensus       231 ~~i~--g~~~s~~e~~~~i~~~~g~~~~~~~~~~~  263 (334)
                      |++.  ++.+|+.|+++.+.+.+|.+.+...+|..
T Consensus       212 ~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~  246 (307)
T 2gas_A          212 VHIRLPKNYLTQNEVIALWEKKIGKTLEKTYVSEE  246 (307)
T ss_dssp             EECCCGGGEEEHHHHHHHHHHHHTSCCEEEEECHH
T ss_pred             EEEeCCCCcCCHHHHHHHHHHHhCCCCceeecCHH
Confidence            7775  36799999999999999998887777644

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.95  E-value=1.4e-28  Score=210.26  Aligned_cols=222  Identities=16%  Similarity=0.102  Sum_probs=159.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc----CCCEEEEecccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF----GCHVIFHTAALV   76 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~----~~d~vih~a~~~   76 (334)
                      ++||||||+|+||+++++.|+++|++|++++|++++...        .+.+|++|.+++.++++    ++|+|||+||..
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~   73 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA--------DLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVG   73 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--------CTTSHHHHHHHHHHHHHHHTTCCSEEEECCCCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc--------cccCCcccHHHHHHHHHHcCCCccEEEECCCCC
Confidence            269999999999999999999999999999998764321        16689999998888886    799999999975


Q ss_pred             CCCCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCcc-CCC-------CCcc----ccccccCh
Q 019878           77 EPWLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYI-ADE-------NQVH----EEKYFCTQ  141 (334)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~-~~e-------~~~~----~~~~~~~~  141 (334)
                      .. ..++...+++|+.++.++++++.+.   .+.+++|++||..+|+...... ..|       +.+.    ....+.+.
T Consensus        74 ~~-~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (255)
T 2dkn_A           74 VT-AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLA  152 (255)
T ss_dssp             TT-SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCHHHH
T ss_pred             Cc-chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCCcchh
Confidence            42 2457788999999999999988765   2457999999999987542111 000       0000    00023578


Q ss_pred             HHHHHHHHHHHHHHHhh----cCCCEEEEecCceecCCCCCchhHHHHHH-HHHHcCCCCccccCCCCceeeeeHHHHHH
Q 019878          142 YERSKAVADKIALQAAS----EGLPIVPVYPGVIYGPGKLTTGNLVAKLM-IERFNGRLPGYIGYGNDRFSFCHVDDVVD  216 (334)
Q Consensus       142 Y~~sK~~~E~~~~~~~~----~g~~~~ilR~~~v~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  216 (334)
                      |+.+|.+.|.+.+.+..    +|++++++||+.++|+..   ...+.... .....     ... + ..+++++++|+|+
T Consensus       153 Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~---~~~~~~~~~~~~~~-----~~~-~-~~~~~~~~~dva~  222 (255)
T 2dkn_A          153 YAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLL---QASKADPRYGESTR-----RFV-A-PLGRGSEPREVAE  222 (255)
T ss_dssp             HHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHH---HHHHHCTTTHHHHH-----SCC-C-TTSSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhh---hhcccchhhHHHHH-----HHH-H-HhcCCCCHHHHHH
Confidence            99999999998887653    589999999999998732   11100000 00000     000 1 4457999999999


Q ss_pred             HHHHHhhcC---CCCCeEEecC-CCCCHH
Q 019878          217 GHIAAMEKG---RSGERYLLTG-ENASFM  241 (334)
Q Consensus       217 a~~~~~~~~---~~g~~~~i~g-~~~s~~  241 (334)
                      +++.++..+   ..|++|+++| ..+++.
T Consensus       223 ~~~~l~~~~~~~~~G~~~~v~gg~~~~~~  251 (255)
T 2dkn_A          223 AIAFLLGPQASFIHGSVLFVDGGMDALMR  251 (255)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTHHHHHC
T ss_pred             HHHHHhCCCcccceeeEEEecCCeEeeee
Confidence            999999875   3689999964 444443

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.95  E-value=3.4e-26  Score=193.23  Aligned_cols=197  Identities=15%  Similarity=0.149  Sum_probs=139.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~   80 (334)
                      +||||||+|+||+++++.|+++| ++|++++|++++...+.. .+++++.+|++|.+++.++++++|+|||+|+...   
T Consensus        25 ~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~---  100 (236)
T 3qvo_A           25 NVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYP-TNSQIIMGDVLNHAALKQAMQGQDIVYANLTGED---  100 (236)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCC-TTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTT---
T ss_pred             EEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccccc-CCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCc---
Confidence            69999999999999999999999 899999999876655433 3799999999999999999999999999998411   


Q ss_pred             CCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHhhcC
Q 019878           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEG  160 (334)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g  160 (334)
                               ....++++++++++. ++++||++||..+|+............. ...+...|..    +|..+.   +.|
T Consensus       101 ---------~~~~~~~~~~~~~~~-~~~~iV~iSS~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~l~---~~g  162 (236)
T 3qvo_A          101 ---------LDIQANSVIAAMKAC-DVKRLIFVLSLGIYDEVPGKFVEWNNAV-IGEPLKPFRR----AADAIE---ASG  162 (236)
T ss_dssp             ---------HHHHHHHHHHHHHHT-TCCEEEEECCCCC-----------------CGGGHHHHH----HHHHHH---TSC
T ss_pred             ---------hhHHHHHHHHHHHHc-CCCEEEEEecceecCCCCcccccchhhc-ccchHHHHHH----HHHHHH---HCC
Confidence                     123567999999997 6899999999999987654322111111 1111234443    444443   479


Q ss_pred             CCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC--CCCeEEecCC
Q 019878          161 LPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR--SGERYLLTGE  236 (334)
Q Consensus       161 ~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~--~g~~~~i~g~  236 (334)
                      ++++++||+.++++......                ...........+++++|+|++++.++..+.  .+++|++++.
T Consensus       163 i~~~~vrPg~i~~~~~~~~~----------------~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~  224 (236)
T 3qvo_A          163 LEYTILRPAWLTDEDIIDYE----------------LTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQP  224 (236)
T ss_dssp             SEEEEEEECEEECCSCCCCE----------------EECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECS
T ss_pred             CCEEEEeCCcccCCCCcceE----------------EeccCCCCCCcEECHHHHHHHHHHHHcCcccccCeeEEecCC
Confidence            99999999999987432110                000111112368999999999999999875  5889999753

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.94  E-value=3.9e-27  Score=203.96  Aligned_cols=229  Identities=16%  Similarity=0.151  Sum_probs=169.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vi   70 (334)
                      +||||||+|+||+++++.|+++|++|++++|+......    +....++.++.+|++|.+++.++++       ++|+||
T Consensus        18 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   97 (278)
T 2bgk_A           18 VAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMF   97 (278)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            59999999999999999999999999999997543211    1111268999999999999888775       699999


Q ss_pred             EeccccCCC--------CCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           71 HTAALVEPW--------LPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        71 h~a~~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      |+||.....        .+++...+++|+.++.++++++.+.   .+.+++|++||..+|.....             +.
T Consensus        98 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------------~~  164 (278)
T 2bgk_A           98 GNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEG-------------VS  164 (278)
T ss_dssp             ECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTT-------------SC
T ss_pred             ECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCC-------------CC
Confidence            999974321        1234568899999999999998774   24579999999988864320             13


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      +.|+.+|.+.|.+.+.+.    ++|++++++||+.++|+................... .      +.....+++++|+|
T Consensus       165 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~dva  237 (278)
T 2bgk_A          165 HVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQ-A------ANLKGTLLRAEDVA  237 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHH-T------CSSCSCCCCHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhc-c------cccccccCCHHHHH
Confidence            679999999999888765    358999999999999986432111001111111111 1      11234589999999


Q ss_pred             HHHHHHhhcC---CCCCeEEec-CCCCCHHHHHHHHHHH
Q 019878          216 DGHIAAMEKG---RSGERYLLT-GENASFMQIFDMAAVI  250 (334)
Q Consensus       216 ~a~~~~~~~~---~~g~~~~i~-g~~~s~~e~~~~i~~~  250 (334)
                      +++..++...   ..|++|++. |..+++.|+++.+.+.
T Consensus       238 ~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~  276 (278)
T 2bgk_A          238 DAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHG  276 (278)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSC
T ss_pred             HHHHHHcCcccccCCCCEEEECCcccccCCccchhhhhh
Confidence            9999998653   358999996 5778999999887654

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.94  E-value=1.2e-26  Score=193.99  Aligned_cols=197  Identities=14%  Similarity=0.081  Sum_probs=148.7

Q ss_pred             Cc-EEEEcCCChhhHHHHHHHH-hCCCeEEEEEcCCC-CCCCCC-CCCCeEEEEcCCCChhhHHHHhcCCCEEEEecccc
Q 019878            1 MK-ILVSGASGYLGGRLCHALL-KQGHSVRALVRRTS-DISGLP-SEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (334)
Q Consensus         1 m~-ilItG~tG~iG~~l~~~L~-~~g~~V~~~~r~~~-~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~   76 (334)
                      || ||||||+|+||+++++.|+ ++|++|++++|+++ +...+. ...+++++.+|++|.+++.++++++|+|||+||..
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~   84 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES   84 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC
Confidence            56 9999999999999999999 89999999999877 554331 22479999999999999999999999999999842


Q ss_pred             CCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccC-hHHHHHHHHHHHHHH
Q 019878           77 EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT-QYERSKAVADKIALQ  155 (334)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~-~Y~~sK~~~E~~~~~  155 (334)
                                   |+. ++++++++++. ++++||++||..+|+..+........     .... .|+.+|..+|..++.
T Consensus        85 -------------n~~-~~~~~~~~~~~-~~~~iv~iSs~~~~~~~~~~~~~~~~-----~~~~~~y~~~K~~~e~~~~~  144 (221)
T 3r6d_A           85 -------------GSD-MASIVKALSRX-NIRRVIGVSMAGLSGEFPVALEKWTF-----DNLPISYVQGERQARNVLRE  144 (221)
T ss_dssp             -------------HHH-HHHHHHHHHHT-TCCEEEEEEETTTTSCSCHHHHHHHH-----HTSCHHHHHHHHHHHHHHHH
T ss_pred             -------------Chh-HHHHHHHHHhc-CCCeEEEEeeceecCCCCcccccccc-----cccccHHHHHHHHHHHHHHh
Confidence                         555 89999999987 68999999999998754321110000     0113 799999999998875


Q ss_pred             HhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHh--hcCC--CCCeE
Q 019878          156 AASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAM--EKGR--SGERY  231 (334)
Q Consensus       156 ~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~--~~~~--~g~~~  231 (334)
                         .|++++++||+.++++.....               .............+++.+|+|++++.++  ..+.  .++.+
T Consensus       145 ---~~i~~~~vrpg~v~~~~~~~~---------------~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~  206 (221)
T 3r6d_A          145 ---SNLNYTILRLTWLYNDPEXTD---------------YELIPEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSI  206 (221)
T ss_dssp             ---SCSEEEEEEECEEECCTTCCC---------------CEEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEE
T ss_pred             ---CCCCEEEEechhhcCCCCCcc---------------eeeccCCccCCCceeeHHHHHHHHHHHHHhcChhhhhccee
Confidence               799999999999999732110               0000011111224899999999999999  7654  35666


Q ss_pred             EecC
Q 019878          232 LLTG  235 (334)
Q Consensus       232 ~i~g  235 (334)
                      .+++
T Consensus       207 ~i~~  210 (221)
T 3r6d_A          207 GVGE  210 (221)
T ss_dssp             EEEC
T ss_pred             eecC
Confidence            6654

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.94  E-value=5.7e-27  Score=193.24  Aligned_cols=185  Identities=19%  Similarity=0.148  Sum_probs=147.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcC---CCEEEEeccccC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG---CHVIFHTAALVE   77 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~---~d~vih~a~~~~   77 (334)
                      ||||||||+|+||+++++.|+ +|++|++++|+..            ++.+|++|.+++.+++++   +|+|||+||...
T Consensus         4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~------------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~~   70 (202)
T 3d7l_A            4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG------------DVTVDITNIDSIKKMYEQVGKVDAIVSATGSAT   70 (202)
T ss_dssp             CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS------------SEECCTTCHHHHHHHHHHHCCEEEEEECCCCCC
T ss_pred             cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc------------ceeeecCCHHHHHHHHHHhCCCCEEEECCCCCC
Confidence            799999999999999999999 9999999999864            367999999999888865   899999999643


Q ss_pred             CC------CCCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHH
Q 019878           78 PW------LPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD  150 (334)
Q Consensus        78 ~~------~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E  150 (334)
                      ..      .+++...+++|+.++.++++++.+... .+++|++||...+.+..              +.+.|+.+|.+.|
T Consensus        71 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~--------------~~~~Y~~sK~~~~  136 (202)
T 3d7l_A           71 FSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPIV--------------QGASAAMANGAVT  136 (202)
T ss_dssp             CCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCCT--------------TCHHHHHHHHHHH
T ss_pred             CCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCCC--------------ccHHHHHHHHHHH
Confidence            21      122345678999999999999987611 15899999987654321              1367999999999


Q ss_pred             HHHHHHhh---cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCC
Q 019878          151 KIALQAAS---EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRS  227 (334)
Q Consensus       151 ~~~~~~~~---~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~  227 (334)
                      .+.+.+..   +|++++++||+.++++..        .    .         +.....+++++++|+|++++.++.....
T Consensus       137 ~~~~~~~~e~~~gi~v~~v~pg~v~~~~~--------~----~---------~~~~~~~~~~~~~dva~~~~~~~~~~~~  195 (202)
T 3d7l_A          137 AFAKSAAIEMPRGIRINTVSPNVLEESWD--------K----L---------EPFFEGFLPVPAAKVARAFEKSVFGAQT  195 (202)
T ss_dssp             HHHHHHTTSCSTTCEEEEEEECCBGGGHH--------H----H---------GGGSTTCCCBCHHHHHHHHHHHHHSCCC
T ss_pred             HHHHHHHHHccCCeEEEEEecCccCCchh--------h----h---------hhhccccCCCCHHHHHHHHHHhhhcccc
Confidence            99998774   389999999999998731        0    0         1112346799999999999998866667


Q ss_pred             CCeEEe
Q 019878          228 GERYLL  233 (334)
Q Consensus       228 g~~~~i  233 (334)
                      |++||+
T Consensus       196 G~~~~v  201 (202)
T 3d7l_A          196 GESYQV  201 (202)
T ss_dssp             SCEEEE
T ss_pred             CceEec
Confidence            888887

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.94  E-value=9e-27  Score=202.00  Aligned_cols=232  Identities=19%  Similarity=0.144  Sum_probs=161.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+.+....+..  ..+++++.+|++|.+++.++++       ++|+|||+
T Consensus         7 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~   86 (281)
T 3m1a_A            7 VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVLVNN   86 (281)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEEC
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence            59999999999999999999999999999998765432110  1368999999999999888775       68999999


Q ss_pred             ccccCC------CCCCcccchhhhhHH----HHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChH
Q 019878           73 AALVEP------WLPDPSRFFAVNVEG----LKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (334)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y  142 (334)
                      ||....      ..+++...+++|+.+    ++.++..+++. +.+++|++||...+.+..              +.+.|
T Consensus        87 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~--------------~~~~Y  151 (281)
T 3m1a_A           87 AGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRER-GSGSVVNISSFGGQLSFA--------------GFSAY  151 (281)
T ss_dssp             CCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTCCCT--------------TCHHH
T ss_pred             CCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEcCccccCCCC--------------CchHH
Confidence            997421      222345688999999    55555555665 567999999987664322              13679


Q ss_pred             HHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCch----hHHHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          143 ERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTG----NLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       143 ~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      +.+|.+.|.+.+.+.    ++|++++++|||.++++......    .....+..........   .......++.+++|+
T Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~dv  228 (281)
T 3m1a_A          152 SATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQL---VQGSDGSQPGDPAKA  228 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHH---HHC-----CBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHH---HhhccCCCCCCHHHH
Confidence            999999999888765    35999999999999887421110    0000111000000000   111234568889999


Q ss_pred             HHHHHHHhhcCCCCCeEEecC-CCCCHHHHHHHHHHHh
Q 019878          215 VDGHIAAMEKGRSGERYLLTG-ENASFMQIFDMAAVIT  251 (334)
Q Consensus       215 a~a~~~~~~~~~~g~~~~i~g-~~~s~~e~~~~i~~~~  251 (334)
                      |+++..++..+..+..|++++ ....+.+....+.+.+
T Consensus       229 a~a~~~~~~~~~~~~~~~l~s~~~~~i~g~~~~i~~~~  266 (281)
T 3m1a_A          229 AAAIRLALDTEKTPLRLALGGDAVDFLTGHLDSVRAEL  266 (281)
T ss_dssp             HHHHHHHHHSSSCCSEEEESHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCeEEecCchHHHHHHHHHHHHHHHH
Confidence            999999999988888999975 4455566666665543

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.94  E-value=6.4e-28  Score=199.70  Aligned_cols=192  Identities=15%  Similarity=0.129  Sum_probs=149.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-CCCeEEEEcCCCChhhHHHHhc---CCCEEEEecccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-EGALELVYGDVTDYRSLVDACF---GCHVIFHTAALV   76 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~v~~~~~Dl~d~~~~~~~~~---~~d~vih~a~~~   76 (334)
                      |++|||||+|+||+++++.|+++  +|++++|++++...+.. ... +++.+|++|.+++.++++   ++|+|||+||..
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~   77 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEEAGPLDLLVHAVGKA   77 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHhcCCCCEEEECCCcC
Confidence            78999999999999999999988  99999997653322110 012 788999999999999988   899999999974


Q ss_pred             CC------CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHH
Q 019878           77 EP------WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD  150 (334)
Q Consensus        77 ~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E  150 (334)
                      ..      ..+++...+++|+.++.++++++++. +.+++|++||..+|.+..              +.+.|+.+|.+.|
T Consensus        78 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~sS~~~~~~~~--------------~~~~Y~~sK~a~~  142 (207)
T 2yut_A           78 GRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQ-KGARAVFFGAYPRYVQVP--------------GFAAYAAAKGALE  142 (207)
T ss_dssp             CCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEE-EEEEEEEECCCHHHHSST--------------TBHHHHHHHHHHH
T ss_pred             CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhc-CCcEEEEEcChhhccCCC--------------CcchHHHHHHHHH
Confidence            32      22345668899999999999999665 568999999998875432              1367999999999


Q ss_pred             HHHHHHhh----cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC
Q 019878          151 KIALQAAS----EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR  226 (334)
Q Consensus       151 ~~~~~~~~----~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~  226 (334)
                      .+.+.+..    +|++++++||+.++++..                      .+.+...+.+++++|+|++++.++.++.
T Consensus       143 ~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~----------------------~~~~~~~~~~~~~~dva~~~~~~~~~~~  200 (207)
T 2yut_A          143 AYLEAARKELLREGVHLVLVRLPAVATGLW----------------------APLGGPPKGALSPEEAARKVLEGLFREP  200 (207)
T ss_dssp             HHHHHHHHHHHTTTCEEEEECCCCBCSGGG----------------------GGGTSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred             HHHHHHHHHHhhhCCEEEEEecCcccCCCc----------------------cccCCCCCCCCCHHHHHHHHHHHHhCCC
Confidence            98887653    599999999999998631                      0112334679999999999999999877


Q ss_pred             CCCeEE
Q 019878          227 SGERYL  232 (334)
Q Consensus       227 ~g~~~~  232 (334)
                      .+.+++
T Consensus       201 ~~~~~~  206 (207)
T 2yut_A          201 VPALLE  206 (207)
T ss_dssp             CCSCCC
T ss_pred             Cccccc
Confidence            766654

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.94  E-value=1.8e-26  Score=197.25  Aligned_cols=214  Identities=16%  Similarity=0.153  Sum_probs=157.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      |+||||||+|+||+++++.|+++|++|++++|+.+....+.     ...++.++.+|++|.+++.++++       ++|+
T Consensus        12 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   91 (255)
T 1fmc_A           12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDI   91 (255)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            46999999999999999999999999999999864321110     01268899999999999888876       7999


Q ss_pred             EEEeccccCC-----CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           69 IFHTAALVEP-----WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        69 vih~a~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      |||+||....     ..+++...+++|+.++.++++++.+.   .+.+++|++||...+.+..              +.+
T Consensus        92 vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------------~~~  157 (255)
T 1fmc_A           92 LVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNI--------------NMT  157 (255)
T ss_dssp             EEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCT--------------TCH
T ss_pred             EEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCC--------------CCc
Confidence            9999997432     12234567899999999999988632   1467999999988775432              136


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHH
Q 019878          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVD  216 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  216 (334)
                      .|+.+|.+.|.+.+.+.    ..|++++++||+.++++.....  ...........+.+         ...+++++|+|+
T Consensus       158 ~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~---------~~~~~~~~dva~  226 (255)
T 1fmc_A          158 SYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV--ITPEIEQKMLQHTP---------IRRLGQPQDIAN  226 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT--CCHHHHHHHHHTCS---------SCSCBCHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhc--cChHHHHHHHhcCC---------cccCCCHHHHHH
Confidence            79999999999888765    3489999999999998742110  01122222222221         234789999999


Q ss_pred             HHHHHhhcC---CCCCeEEec-CCCCC
Q 019878          217 GHIAAMEKG---RSGERYLLT-GENAS  239 (334)
Q Consensus       217 a~~~~~~~~---~~g~~~~i~-g~~~s  239 (334)
                      ++..++..+   ..|++|+++ |...|
T Consensus       227 ~~~~l~~~~~~~~~G~~~~v~gg~~~s  253 (255)
T 1fmc_A          227 AALFLCSPAASWVSGQILTVSGGGVQE  253 (255)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTSCCC
T ss_pred             HHHHHhCCccccCCCcEEEECCceecc
Confidence            999998754   258899996 55555

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.93  E-value=5.2e-26  Score=193.08  Aligned_cols=211  Identities=23%  Similarity=0.241  Sum_probs=155.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-CCCCeEEEEcCCCChhhHHHHhcC---CCEEEEecccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-SEGALELVYGDVTDYRSLVDACFG---CHVIFHTAALV   76 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~~---~d~vih~a~~~   76 (334)
                      |++|||||+|+||++++++|+++|++|++++|+.+....+. ...+++++.+|++|.+++.+++++   +|+|||+||..
T Consensus         8 ~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag~~   87 (244)
T 1cyd_A            8 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAALV   87 (244)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCCCC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECCccc
Confidence            46999999999999999999999999999999864322111 012578889999999999998864   79999999964


Q ss_pred             CC------CCCCcccchhhhhHHHHHHHHHHHhcC---C-CcEEEEecccceeccCCCccCCCCCccccccccChHHHHH
Q 019878           77 EP------WLPDPSRFFAVNVEGLKNVVQAAKETK---T-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (334)
Q Consensus        77 ~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK  146 (334)
                      ..      ..++++..+++|+.++.++++++.+..   + .+++|++||..++...+.              .+.|+.+|
T Consensus        88 ~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~~~Y~~sK  153 (244)
T 1cyd_A           88 IMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPN--------------LITYSSTK  153 (244)
T ss_dssp             CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT--------------BHHHHHHH
T ss_pred             CCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCC--------------cchhHHHH
Confidence            32      122345688999999999999887641   2 579999999887764321              36799999


Q ss_pred             HHHHHHHHHHhh----cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHh
Q 019878          147 AVADKIALQAAS----EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAM  222 (334)
Q Consensus       147 ~~~E~~~~~~~~----~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~  222 (334)
                      .+.|.+.+.+..    +|++++++||+.++++..... .....++.....+.         ..+++++++|+|+++..++
T Consensus       154 ~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~  223 (244)
T 1cyd_A          154 GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKV-SADPEFARKLKERH---------PLRKFAEVEDVVNSILFLL  223 (244)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHH-TCCHHHHHHHHHHS---------TTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEecCcccCcccccc-ccCHHHHHHHHhcC---------CccCCCCHHHHHHHHHHHh
Confidence            999998887652    589999999999998742100 00011222222221         2357999999999999999


Q ss_pred             hcC---CCCCeEEecC
Q 019878          223 EKG---RSGERYLLTG  235 (334)
Q Consensus       223 ~~~---~~g~~~~i~g  235 (334)
                      ..+   ..|+.+++.|
T Consensus       224 ~~~~~~~~G~~~~v~g  239 (244)
T 1cyd_A          224 SDRSASTSGGGILVDA  239 (244)
T ss_dssp             SGGGTTCCSSEEEEST
T ss_pred             CchhhcccCCEEEECC
Confidence            764   2588999864

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.93  E-value=1.3e-25  Score=194.33  Aligned_cols=226  Identities=16%  Similarity=0.171  Sum_probs=153.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----C---C-CCCCeEEEEcCCCChhhHHHHhc-------CC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----L---P-SEGALELVYGDVTDYRSLVDACF-------GC   66 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~---~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~   66 (334)
                      ++|||||+|+||+++++.|+++|++|++++|++++...    +   . ...++.++.+|++|.+++.++++       ++
T Consensus         8 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (278)
T 1spx_A            8 VAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKL   87 (278)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHcCCC
Confidence            59999999999999999999999999999998643211    0   1 11268899999999999888876       79


Q ss_pred             CEEEEeccccCC----------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccce-eccCCCccCCCCCc
Q 019878           67 HVIFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFA-LGSTDGYIADENQV  132 (334)
Q Consensus        67 d~vih~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v-~~~~~~~~~~e~~~  132 (334)
                      |+|||+||....          ..++++..+++|+.++.++++++.+.   .+ +++|++||... +...+         
T Consensus        88 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~---------  157 (278)
T 1spx_A           88 DILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATP---------  157 (278)
T ss_dssp             CEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCT---------
T ss_pred             CEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCC---------
Confidence            999999997432          22234567899999999999998765   13 69999999876 54321         


Q ss_pred             cccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCch---hHH---HHHHHHHHcCCCCccccCC
Q 019878          133 HEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTG---NLV---AKLMIERFNGRLPGYIGYG  202 (334)
Q Consensus       133 ~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~  202 (334)
                           +...|+.+|.+.+.+.+.+.    ++|++++++||+.++++......   ...   ......... ..+      
T Consensus       158 -----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~p------  225 (278)
T 1spx_A          158 -----DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKE-CVP------  225 (278)
T ss_dssp             -----TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHH-HCT------
T ss_pred             -----CccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHh-cCC------
Confidence                 13669999999998887754    46999999999999987532110   000   000111111 111      


Q ss_pred             CCceeeeeHHHHHHHHHHHhhcC----CCCCeEEec-CCCCCHHHHHHHHHHHh
Q 019878          203 NDRFSFCHVDDVVDGHIAAMEKG----RSGERYLLT-GENASFMQIFDMAAVIT  251 (334)
Q Consensus       203 ~~~~~~i~v~D~a~a~~~~~~~~----~~g~~~~i~-g~~~s~~e~~~~i~~~~  251 (334)
                        ...+.+++|+|+++..++..+    ..|+++++. |..+++.|+++.+.+++
T Consensus       226 --~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~  277 (278)
T 1spx_A          226 --AGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL  277 (278)
T ss_dssp             --TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred             --CcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence              124789999999999988643    469999996 56799999999887754

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.93  E-value=7.6e-25  Score=187.47  Aligned_cols=202  Identities=20%  Similarity=0.214  Sum_probs=155.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~a~   74 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+......    ..+.++.+|++|.+++.++++       ++|+|||+||
T Consensus        30 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg  105 (260)
T 3un1_A           30 VVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD----PDIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAG  105 (260)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS----TTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----CceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEECCC
Confidence            59999999999999999999999999999998765433    268999999999999888775       6999999999


Q ss_pred             ccCC------CCCCcccchhhhhHHHHHHHHHHH----hcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHH
Q 019878           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAK----ETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (334)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (334)
                      ....      ..++++..+++|+.++.++++++.    +. +..++|++||...+......            +...|+.
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~~~~~------------~~~~Y~~  172 (260)
T 3un1_A          106 VFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQ-GSGHIVSITTSLVDQPMVGM------------PSALASL  172 (260)
T ss_dssp             CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCTTTTSCBTTC------------CCHHHHH
T ss_pred             CCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEEechhhccCCCCC------------ccHHHHH
Confidence            7432      223456688999999999999884    33 56799999998776433221            1367999


Q ss_pred             HHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHH
Q 019878          145 SKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIA  220 (334)
Q Consensus       145 sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~  220 (334)
                      ||.+.+.+.+.+.    ++|+++.+++||.++++....  ..    . ....+.        .....+.+++|+|+++..
T Consensus       173 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~--~~----~-~~~~~~--------~p~~r~~~~~dva~av~~  237 (260)
T 3un1_A          173 TKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA--ET----H-STLAGL--------HPVGRMGEIRDVVDAVLY  237 (260)
T ss_dssp             HHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG--GG----H-HHHHTT--------STTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH--HH----H-HHHhcc--------CCCCCCcCHHHHHHHHHH
Confidence            9999998888765    348999999999999986432  11    1 111121        123357789999999999


Q ss_pred             HhhcCC-CCCeEEecC
Q 019878          221 AMEKGR-SGERYLLTG  235 (334)
Q Consensus       221 ~~~~~~-~g~~~~i~g  235 (334)
                      +.+... .|+++++.|
T Consensus       238 L~~~~~itG~~i~vdG  253 (260)
T 3un1_A          238 LEHAGFITGEILHVDG  253 (260)
T ss_dssp             HHHCTTCCSCEEEEST
T ss_pred             hcccCCCCCcEEEECC
Confidence            865543 699999964

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.93  E-value=1.2e-24  Score=184.28  Aligned_cols=206  Identities=24%  Similarity=0.198  Sum_probs=155.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc------CCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF------GCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------~~d~vih~a~   74 (334)
                      |+||||||+|+||+++++.|+++|++|++++|+.+ ..      .+.++.+|++|.+++.++++      ++|+|||+||
T Consensus         3 k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~~------~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag   75 (242)
T 1uay_A            3 RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-GE------DLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAG   75 (242)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-SS------SSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-cc------ceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEccc
Confidence            46999999999999999999999999999999876 21      56899999999999988886      7899999999


Q ss_pred             ccCCC------CC----CcccchhhhhHHHHHHHHHHHhcCC---------CcEEEEecccceeccCCCccCCCCCcccc
Q 019878           75 LVEPW------LP----DPSRFFAVNVEGLKNVVQAAKETKT---------VEKIIYTSSFFALGSTDGYIADENQVHEE  135 (334)
Q Consensus        75 ~~~~~------~~----~~~~~~~~n~~~~~~l~~~~~~~~~---------~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~  135 (334)
                      .....      .+    ++...+++|+.++.++++++.+...         .+++|++||...+.....           
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----------  144 (242)
T 1uay_A           76 VGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIG-----------  144 (242)
T ss_dssp             CCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTT-----------
T ss_pred             ccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCC-----------
Confidence            74321      11    4456789999999999999976521         139999999988764321           


Q ss_pred             ccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeH
Q 019878          136 KYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHV  211 (334)
Q Consensus       136 ~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  211 (334)
                         .+.|+.+|.+.+.+.+.+.    ++|++++++||+.++++......   ..+. .......+.       ...++++
T Consensus       145 ---~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~-~~~~~~~~~-------~~~~~~~  210 (242)
T 1uay_A          145 ---QAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP---EKAK-ASLAAQVPF-------PPRLGRP  210 (242)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC---HHHH-HHHHTTCCS-------SCSCCCH
T ss_pred             ---CchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccc---hhHH-HHHHhhCCC-------cccCCCH
Confidence               3679999999988877654    34899999999999987421111   1112 222222221       0347899


Q ss_pred             HHHHHHHHHHhhcC-CCCCeEEec-CCCC
Q 019878          212 DDVVDGHIAAMEKG-RSGERYLLT-GENA  238 (334)
Q Consensus       212 ~D~a~a~~~~~~~~-~~g~~~~i~-g~~~  238 (334)
                      +|+|++++.++... ..|++|++. |..+
T Consensus       211 ~dva~~~~~l~~~~~~~G~~~~v~gG~~~  239 (242)
T 1uay_A          211 EEYAALVLHILENPMLNGEVVRLDGALRM  239 (242)
T ss_dssp             HHHHHHHHHHHHCTTCCSCEEEESTTCCC
T ss_pred             HHHHHHHHHHhcCCCCCCcEEEEcCCeec
Confidence            99999999999874 368999996 4443

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.92  E-value=1.4e-25  Score=192.10  Aligned_cols=219  Identities=21%  Similarity=0.182  Sum_probs=158.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+.+.......  ...+.++.+|++|.+++.++++       ++|+|||+
T Consensus        10 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~   89 (259)
T 4e6p_A           10 SALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDILVNN   89 (259)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            59999999999999999999999999999997653221100  1268899999999999888776       69999999


Q ss_pred             ccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC----CCcEEEEecccceeccCCCccCCCCCccccccccChH
Q 019878           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (334)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y  142 (334)
                      ||....      ..++++..+++|+.++.++++++.+..    ...++|++||...+.+...              .+.|
T Consensus        90 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y  155 (259)
T 4e6p_A           90 AALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEAL--------------VAIY  155 (259)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT--------------BHHH
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCC--------------ChHH
Confidence            997432      123455678899999999999887641    1359999999877643321              3679


Q ss_pred             HHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHc---CCCCccccCCCCceeeeeHHHHH
Q 019878          143 ERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFN---GRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       143 ~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      +.+|.+.+.+.+.+.    ++|+++.+++|+.++++...    .....+.....   +......+.....+.+.+++|+|
T Consensus       156 ~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva  231 (259)
T 4e6p_A          156 CATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWD----GVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLT  231 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHH----HHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhh----hhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHH
Confidence            999999998888764    45899999999999998521    11111211111   11111122334456799999999


Q ss_pred             HHHHHHhhcC---CCCCeEEec-CCCC
Q 019878          216 DGHIAAMEKG---RSGERYLLT-GENA  238 (334)
Q Consensus       216 ~a~~~~~~~~---~~g~~~~i~-g~~~  238 (334)
                      +++..++...   -.|++|++. |..+
T Consensus       232 ~~v~~L~s~~~~~itG~~i~vdgG~~~  258 (259)
T 4e6p_A          232 GMAIFLASAESDYIVSQTYNVDGGNWM  258 (259)
T ss_dssp             HHHHHTTSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHHHHhCCccCCCCCCEEEECcChhc
Confidence            9999988643   359999996 4444

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.92  E-value=2.8e-26  Score=200.95  Aligned_cols=226  Identities=14%  Similarity=0.121  Sum_probs=162.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC------CCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------EGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      +++|||||+|+||+++++.|+++|++|++++|+.+....+..      ..++.++.+|++|.+++.++++       ++|
T Consensus        27 k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id  106 (302)
T 1w6u_A           27 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPN  106 (302)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence            469999999999999999999999999999998643221100      1268999999999998887765       369


Q ss_pred             EEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc----CCCcEEEEecccceeccCCCccCCCCCcccccc
Q 019878           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        68 ~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~  137 (334)
                      +|||+||....      ..+++...+++|+.++.++++++.+.    .+.+++|++||.+.+.+..              
T Consensus       107 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------------  172 (302)
T 1w6u_A          107 IVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSG--------------  172 (302)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCT--------------
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCC--------------
Confidence            99999996322      12235568899999999998888653    2357999999987765322              


Q ss_pred             ccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCC-c-hhHHHHHHHHHHcCCCCccccCCCCceeeeeH
Q 019878          138 FCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLT-T-GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHV  211 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  211 (334)
                      +...|+.+|.+.|.+.+.+.    .+|++++++||+.+++++... . ....  ........ .+        ...+.++
T Consensus       173 ~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~-~p--------~~~~~~~  241 (302)
T 1w6u_A          173 FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGT--FEKEMIGR-IP--------CGRLGTV  241 (302)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSH--HHHHHHTT-CT--------TSSCBCH
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchh--hHHHHHhc-CC--------cCCCCCH
Confidence            13679999999999888765    358999999999999873211 0 1100  01111122 11        2247889


Q ss_pred             HHHHHHHHHHhhcC---CCCCeEEec-CCCCCHHHHHHHHHHHh
Q 019878          212 DDVVDGHIAAMEKG---RSGERYLLT-GENASFMQIFDMAAVIT  251 (334)
Q Consensus       212 ~D~a~a~~~~~~~~---~~g~~~~i~-g~~~s~~e~~~~i~~~~  251 (334)
                      +|+|+++..++...   ..|++|++. |..+++.++++.+.+..
T Consensus       242 ~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~  285 (302)
T 1w6u_A          242 EELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVT  285 (302)
T ss_dssp             HHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCC
T ss_pred             HHHHHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhc
Confidence            99999999998753   268899996 55677777776666543

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.92  E-value=3.9e-25  Score=189.48  Aligned_cols=212  Identities=17%  Similarity=0.076  Sum_probs=154.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----C-CCCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      +||||||+|+||+++++.|+++|++|++++|+.+....+    . ...++.++.+|++|.+++.++++       ++|+|
T Consensus        15 ~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   94 (260)
T 3awd_A           15 VAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDIL   94 (260)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            599999999999999999999999999999986432110    0 01268999999999999888775       68999


Q ss_pred             EEeccccC-C-C-----CCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           70 FHTAALVE-P-W-----LPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        70 ih~a~~~~-~-~-----~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      ||+||... . .     .+++...+++|+.++.++++++.+.   .+..++|++||...+......            +.
T Consensus        95 i~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~------------~~  162 (260)
T 3awd_A           95 VACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQ------------QQ  162 (260)
T ss_dssp             EECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSS------------CC
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCC------------Cc
Confidence            99999743 1 1     1123567899999999999998753   146799999998765432211            12


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhH-HHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNL-VAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      +.|+.+|.+.|.+.+.+.    ++|++++++||+.++++....  .. ...+......+.+         ...+++++|+
T Consensus       163 ~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~--~~~~~~~~~~~~~~~~---------~~~~~~~~dv  231 (260)
T 3awd_A          163 AAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRF--GMEKPELYDAWIAGTP---------MGRVGQPDEV  231 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHH--HHTCHHHHHHHHHTCT---------TSSCBCHHHH
T ss_pred             cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhc--ccCChHHHHHHHhcCC---------cCCCCCHHHH
Confidence            679999999999888765    358999999999999986420  11 0122222222211         2347899999


Q ss_pred             HHHHHHHhhcC---CCCCeEEecCC
Q 019878          215 VDGHIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       215 a~a~~~~~~~~---~~g~~~~i~g~  236 (334)
                      |+++..++...   ..|++|++.|.
T Consensus       232 a~~~~~l~~~~~~~~~G~~~~v~gg  256 (260)
T 3awd_A          232 ASVVQFLASDAASLMTGAIVNVDAG  256 (260)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHhCchhccCCCcEEEECCc
Confidence            99999998653   36889999753

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.92  E-value=4.4e-25  Score=188.88  Aligned_cols=210  Identities=15%  Similarity=0.119  Sum_probs=154.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcC-CCCCCCCC-----CCCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRR-TSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      |+||||||+|+||+++++.|+++|++|++++|+ ++....+.     ...++.++.+|++|.+++.++++       ++|
T Consensus         8 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   87 (258)
T 3afn_B            8 KRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGGID   87 (258)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            369999999999999999999999999999998 54322110     01268899999999999888876       799


Q ss_pred             EEEEeccc-cCC------CCCCcccchhhhhHHHHHHHHHHHhcC--------CCcEEEEecccceec-cCCCccCCCCC
Q 019878           68 VIFHTAAL-VEP------WLPDPSRFFAVNVEGLKNVVQAAKETK--------TVEKIIYTSSFFALG-STDGYIADENQ  131 (334)
Q Consensus        68 ~vih~a~~-~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~--------~~~~~v~~Ss~~v~~-~~~~~~~~e~~  131 (334)
                      +|||+||. ...      ..+++...+++|+.++.++++++.+..        ...++|++||...+. ..+        
T Consensus        88 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------  159 (258)
T 3afn_B           88 VLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGP--------  159 (258)
T ss_dssp             EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCT--------
T ss_pred             EEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCC--------
Confidence            99999996 321      112245578999999999998775431        126999999987664 211        


Q ss_pred             ccccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCcee
Q 019878          132 VHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFS  207 (334)
Q Consensus       132 ~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (334)
                            +.+.|+.+|.+.|.+.+.+.    ++|++++++||+.++++......   ..+......+.         ..+.
T Consensus       160 ------~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~---------~~~~  221 (258)
T 3afn_B          160 ------GAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKT---QDVRDRISNGI---------PMGR  221 (258)
T ss_dssp             ------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCC---HHHHHHHHTTC---------TTCS
T ss_pred             ------CchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccC---HHHHHHHhccC---------CCCc
Confidence                  13679999999999888764    34899999999999998533211   12222222221         2236


Q ss_pred             eeeHHHHHHHHHHHhhcC----CCCCeEEecCC
Q 019878          208 FCHVDDVVDGHIAAMEKG----RSGERYLLTGE  236 (334)
Q Consensus       208 ~i~v~D~a~a~~~~~~~~----~~g~~~~i~g~  236 (334)
                      +++++|+|+++..++...    ..|++|+++|.
T Consensus       222 ~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg  254 (258)
T 3afn_B          222 FGTAEEMAPAFLFFASHLASGYITGQVLDINGG  254 (258)
T ss_dssp             CBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTT
T ss_pred             CCCHHHHHHHHHHHhCcchhccccCCEEeECCC
Confidence            899999999999998753    35889999754

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.92  E-value=8e-24  Score=180.99  Aligned_cols=212  Identities=23%  Similarity=0.242  Sum_probs=151.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC--CCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+........  .++.++.+|++|.+++.++++       ++|++||+
T Consensus         9 ~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~n   88 (257)
T 3tpc_A            9 VFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGLVNC   88 (257)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            599999999999999999999999999999998765443221  368899999999998888775       69999999


Q ss_pred             ccccCC----------CCCCcccchhhhhHHHHHHHHHHHhcC---------CCcEEEEecccceeccCCCccCCCCCcc
Q 019878           73 AALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETK---------TVEKIIYTSSFFALGSTDGYIADENQVH  133 (334)
Q Consensus        73 a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~~v~~Ss~~v~~~~~~~~~~e~~~~  133 (334)
                      ||....          ..+++...+++|+.++.++++++.+..         +..++|++||...+.....         
T Consensus        89 Ag~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~---------  159 (257)
T 3tpc_A           89 AGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIG---------  159 (257)
T ss_dssp             CCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTT---------
T ss_pred             CCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCC---------
Confidence            997532          113355678999999999999998751         3458999999887754321         


Q ss_pred             ccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeee
Q 019878          134 EEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFC  209 (334)
Q Consensus       134 ~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  209 (334)
                           .+.|+.+|.+.+.+.+.+.    ++|+++..++||.+.++....   . ............+       ....+.
T Consensus       160 -----~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~---~-~~~~~~~~~~~~p-------~~~r~~  223 (257)
T 3tpc_A          160 -----QAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAG---M-PQDVQDALAASVP-------FPPRLG  223 (257)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC------------------CCSS-------SSCSCB
T ss_pred             -----CcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhcc---C-CHHHHHHHHhcCC-------CCCCCC
Confidence                 3679999998888776644    469999999999999875321   1 1111111111111       013578


Q ss_pred             eHHHHHHHHHHHhhcCC-CCCeEEecC-CCC
Q 019878          210 HVDDVVDGHIAAMEKGR-SGERYLLTG-ENA  238 (334)
Q Consensus       210 ~v~D~a~a~~~~~~~~~-~g~~~~i~g-~~~  238 (334)
                      +++|+|+++..++.... .|+++++.| ..+
T Consensus       224 ~~~dva~~v~~l~s~~~itG~~i~vdGG~~~  254 (257)
T 3tpc_A          224 RAEEYAALVKHICENTMLNGEVIRLDGALRM  254 (257)
T ss_dssp             CHHHHHHHHHHHHHCTTCCSCEEEESTTCCC
T ss_pred             CHHHHHHHHHHHcccCCcCCcEEEECCCccC
Confidence            89999999999998643 699999964 443

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.92  E-value=5.7e-25  Score=188.88  Aligned_cols=215  Identities=23%  Similarity=0.135  Sum_probs=150.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC----CCCCC--------CCeEEEEcCCCChhhHHHHhcC----
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS----GLPSE--------GALELVYGDVTDYRSLVDACFG----   65 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~--------~~v~~~~~Dl~d~~~~~~~~~~----   65 (334)
                      +||||||+|+||+++++.|+++|++|++++|+.+...    .+...        .++.++.+|++|.+++.+++++    
T Consensus         9 ~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (264)
T 2pd6_A            9 LALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQAC   88 (264)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHHHHH
Confidence            5999999999999999999999999999999764321    11110        2688999999999988877754    


Q ss_pred             ---C-CEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC---C-CcEEEEecccceeccCCCccCCCCC
Q 019878           66 ---C-HVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---T-VEKIIYTSSFFALGSTDGYIADENQ  131 (334)
Q Consensus        66 ---~-d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~~v~~Ss~~v~~~~~~~~~~e~~  131 (334)
                         + |+|||+||....      ..+++...+++|+.++.++++++.+..   + .+++|++||...+.+..        
T Consensus        89 ~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------  160 (264)
T 2pd6_A           89 FSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNV--------  160 (264)
T ss_dssp             HSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCT--------
T ss_pred             hCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCC--------
Confidence               3 999999997432      223455688999999999999987651   2 46999999986554321        


Q ss_pred             ccccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCcee
Q 019878          132 VHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFS  207 (334)
Q Consensus       132 ~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (334)
                            +.+.|+.+|.+.|.+.+.+.    ++|++++++||+.++++....   ....+......+         .....
T Consensus       161 ------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~---------~~~~~  222 (264)
T 2pd6_A          161 ------GQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQK---VPQKVVDKITEM---------IPMGH  222 (264)
T ss_dssp             ------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-------------CTGGG---------CTTCS
T ss_pred             ------CChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhh---cCHHHHHHHHHh---------CCCCC
Confidence                  13679999999888887754    358999999999999986321   111111111011         11235


Q ss_pred             eeeHHHHHHHHHHHhhcC---CCCCeEEecC-CCCCHHH
Q 019878          208 FCHVDDVVDGHIAAMEKG---RSGERYLLTG-ENASFMQ  242 (334)
Q Consensus       208 ~i~v~D~a~a~~~~~~~~---~~g~~~~i~g-~~~s~~e  242 (334)
                      +.+++|+|+++..++...   ..|+++++.| ..++...
T Consensus       223 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~  261 (264)
T 2pd6_A          223 LGDPEDVADVVAFLASEDSGYITGTSVEVTGGLFMAENL  261 (264)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC------
T ss_pred             CCCHHHHHHHHHHHcCCcccCCCCCEEEECCCceecccc
Confidence            789999999999998753   3588999964 5454433

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.92  E-value=9.4e-25  Score=185.32  Aligned_cols=210  Identities=21%  Similarity=0.211  Sum_probs=154.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-CCCCeEEEEcCCCChhhHHHHhc---CCCEEEEeccccC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-SEGALELVYGDVTDYRSLVDACF---GCHVIFHTAALVE   77 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~---~~d~vih~a~~~~   77 (334)
                      +||||||+|+||+++++.|+++|++|++++|+.++...+. ...+++++.+|++|.+++.++++   ++|+|||+||...
T Consensus         9 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag~~~   88 (244)
T 3d3w_A            9 RVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAAVAL   88 (244)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCCCCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECCccCC
Confidence            5999999999999999999999999999999865332111 01256788999999999999886   4899999999743


Q ss_pred             C------CCCCcccchhhhhHHHHHHHHHHHhc---CC-CcEEEEecccceeccCCCccCCCCCccccccccChHHHHHH
Q 019878           78 P------WLPDPSRFFAVNVEGLKNVVQAAKET---KT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (334)
Q Consensus        78 ~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~  147 (334)
                      .      ..+++...+++|+.++.++++++.+.   .+ .+++|++||...+....              +.+.|+.+|.
T Consensus        89 ~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------------~~~~Y~~sK~  154 (244)
T 3d3w_A           89 LQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVT--------------NHSVYCSTKG  154 (244)
T ss_dssp             CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT--------------TBHHHHHHHH
T ss_pred             CcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCC--------------CCchHHHHHH
Confidence            2      11234568899999999999888764   12 57999999987765322              1367999999


Q ss_pred             HHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhh
Q 019878          148 VADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAME  223 (334)
Q Consensus       148 ~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~  223 (334)
                      +.|.+.+.+.    .+|++++++||+.++++....... ...........         ...+.+++++|+|+++..++.
T Consensus       155 a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~  224 (244)
T 3d3w_A          155 ALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWS-DPHKAKTMLNR---------IPLGKFAEVEHVVNAILFLLS  224 (244)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSC-STTHHHHHHHT---------CTTCSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhcc-ChHHHHHHHhh---------CCCCCCcCHHHHHHHHHHHcC
Confidence            9999888765    358999999999999874210000 00011111111         122468999999999999997


Q ss_pred             cC---CCCCeEEecC
Q 019878          224 KG---RSGERYLLTG  235 (334)
Q Consensus       224 ~~---~~g~~~~i~g  235 (334)
                      ..   ..|++|++.|
T Consensus       225 ~~~~~~~G~~~~v~g  239 (244)
T 3d3w_A          225 DRSGMTTGSTLPVEG  239 (244)
T ss_dssp             GGGTTCCSCEEEEST
T ss_pred             ccccCCCCCEEEECC
Confidence            53   3688999965

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.92  E-value=9.9e-25  Score=187.29  Aligned_cols=213  Identities=13%  Similarity=0.151  Sum_probs=155.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC----C--CCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S--EGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+|+||+++++.|+++|++|++++|++++...+.    .  ..++.++.+|++|.+++.++++       ++|+
T Consensus         9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   88 (263)
T 3ai3_A            9 VAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGADI   88 (263)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5999999999999999999999999999999864322110    0  1268899999999998888775       6999


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      |||+||....      ..+++...+++|+.++.++++++.+.   .+.+++|++||...+.+..              +.
T Consensus        89 lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------~~  154 (263)
T 3ai3_A           89 LVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLW--------------YE  154 (263)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT--------------TC
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCC--------------Cc
Confidence            9999997432      11234567899999999999988642   1467999999998876432              13


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHH-----------HHHHHHHcCCCCccccCCCC
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVA-----------KLMIERFNGRLPGYIGYGND  204 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~  204 (334)
                      ..|+.+|.+.+.+.+.+.    ++|++++++||+.++++...   ....           ..........        ..
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~--------~p  223 (263)
T 3ai3_A          155 PIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWI---KTAKELTKDNGGDWKGYLQSVADEH--------AP  223 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHH---HHHHHHTTTTTCCHHHHHHHHHHHH--------CT
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchh---hhhHhhhcccCCcHHHHHHHHHhcC--------CC
Confidence            679999999998887754    35999999999999987421   1111           1111111110        12


Q ss_pred             ceeeeeHHHHHHHHHHHhhcCC---CCCeEEec-CCCCC
Q 019878          205 RFSFCHVDDVVDGHIAAMEKGR---SGERYLLT-GENAS  239 (334)
Q Consensus       205 ~~~~i~v~D~a~a~~~~~~~~~---~g~~~~i~-g~~~s  239 (334)
                      .+.+.+++|+|+++..++..+.   .|++|++. |..++
T Consensus       224 ~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~s  262 (263)
T 3ai3_A          224 IKRFASPEELANFFVFLCSERATYSVGSAYFVDGGMLKT  262 (263)
T ss_dssp             TCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred             CCCCcCHHHHHHHHHHHcCccccCCCCcEEEECCCcccc
Confidence            2358899999999999987542   58899996 44443

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.92  E-value=4.1e-24  Score=182.01  Aligned_cols=211  Identities=20%  Similarity=0.210  Sum_probs=153.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----C-C-CCCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----L-P-SEGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~-~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      +++|||||+|+||++++++|+++|++|++++|+.++...    + . ...++.++.+|++|.+++.++++       ++|
T Consensus         3 k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (250)
T 2cfc_A            3 RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAID   82 (250)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            359999999999999999999999999999997643211    0 0 11368999999999999888875       699


Q ss_pred             EEEEeccccCCC---------CCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccc
Q 019878           68 VIFHTAALVEPW---------LPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEE  135 (334)
Q Consensus        68 ~vih~a~~~~~~---------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~  135 (334)
                      +|||+||.....         .++++..+++|+.++.++++.+.+.   .+.+++|++||...+....            
T Consensus        83 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------  150 (250)
T 2cfc_A           83 VLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFP------------  150 (250)
T ss_dssp             EEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT------------
T ss_pred             EEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCC------------
Confidence            999999974321         1234567899999998777766542   1467999999987765322            


Q ss_pred             ccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHH-HHHHHHHHcCCCCccccCCCCceeeee
Q 019878          136 KYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLV-AKLMIERFNGRLPGYIGYGNDRFSFCH  210 (334)
Q Consensus       136 ~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~  210 (334)
                        +.+.|+.+|.+.|.+.+.+.    .+|++++++||+.++++....  ... ..+....... .+        ...+.+
T Consensus       151 --~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~~-~~--------~~~~~~  217 (250)
T 2cfc_A          151 --GRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQW--RLDQPELRDQVLAR-IP--------QKEIGT  217 (250)
T ss_dssp             --TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHH--HHTSHHHHHHHHTT-CT--------TCSCBC
T ss_pred             --CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCcccc--ccCCHHHHHHHHhc-CC--------CCCCcC
Confidence              13679999999999888765    348999999999999986321  010 1122222222 11        234789


Q ss_pred             HHHHHHHHHHHhhcCC---CCCeEEecCC
Q 019878          211 VDDVVDGHIAAMEKGR---SGERYLLTGE  236 (334)
Q Consensus       211 v~D~a~a~~~~~~~~~---~g~~~~i~g~  236 (334)
                      ++|+|+++..++..+.   .|+++++.|.
T Consensus       218 ~~dva~~~~~l~~~~~~~~~G~~~~v~gG  246 (250)
T 2cfc_A          218 AAQVADAVMFLAGEDATYVNGAALVMDGA  246 (250)
T ss_dssp             HHHHHHHHHHHHSTTCTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHHcCchhhcccCCEEEECCc
Confidence            9999999999987642   5889999653

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.92  E-value=7.8e-25  Score=186.23  Aligned_cols=208  Identities=17%  Similarity=0.144  Sum_probs=151.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC------CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP------SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+.++...+.      ...++.++.+|++|.+++.++++       ++|+
T Consensus         9 ~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   88 (248)
T 2pnf_A            9 VSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGIDI   88 (248)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSCCSE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            5999999999999999999999999999999864322110      01268899999999999888875       6999


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHH----hcCCCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAK----ETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      |||+||....      ..+++...+++|+.++.++++++.    +. +.+++|++||...+....              +
T Consensus        89 vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~--------------~  153 (248)
T 2pnf_A           89 LVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQ-RWGRIVNISSVVGFTGNV--------------G  153 (248)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHH-TCEEEEEECCHHHHHCCT--------------T
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCcEEEEEccHHhcCCCC--------------C
Confidence            9999997432      112345688999999977766654    34 467999999976543321              1


Q ss_pred             cChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      ...|+.+|.+.+.+.+.+.    ..|++++++||+.++++......    ...........        ....+++++|+
T Consensus       154 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~----~~~~~~~~~~~--------~~~~~~~~~dv  221 (248)
T 2pnf_A          154 QVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLS----EEIKQKYKEQI--------PLGRFGSPEEV  221 (248)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC----HHHHHHHHHTC--------TTSSCBCHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhcc----HHHHHHHHhcC--------CCCCccCHHHH
Confidence            2669999999998887754    35899999999999987532111    11111111111        12358899999


Q ss_pred             HHHHHHHhhcC---CCCCeEEecCC
Q 019878          215 VDGHIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       215 a~a~~~~~~~~---~~g~~~~i~g~  236 (334)
                      |+++..++...   ..|++|++.|.
T Consensus       222 a~~~~~l~~~~~~~~~G~~~~v~gg  246 (248)
T 2pnf_A          222 ANVVLFLCSELASYITGEVIHVNGG  246 (248)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHhCchhhcCCCcEEEeCCC
Confidence            99999998753   35899999653

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.92  E-value=6.6e-25  Score=189.48  Aligned_cols=213  Identities=18%  Similarity=0.109  Sum_probs=153.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEc-CCCCCCC----CC-CCCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~----~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      |+||||||+|+||++++++|+++|++|++++| +.+....    +. ...++.++.+|++|.+++.++++       ++|
T Consensus        22 k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d  101 (274)
T 1ja9_A           22 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLD  101 (274)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEE
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            46999999999999999999999999999999 4322111    00 01268899999999999888776       689


Q ss_pred             EEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEeccccee-ccCCCccCCCCCcccccccc
Q 019878           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFAL-GSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        68 ~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~Ss~~v~-~~~~~~~~~e~~~~~~~~~~  139 (334)
                      +|||+||....      ..+++...+++|+.++.++++++.+... .+++|++||...+ ....              +.
T Consensus       102 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~~  167 (274)
T 1ja9_A          102 FVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIP--------------NH  167 (274)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCC--------------SC
T ss_pred             EEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCCC--------------CC
Confidence            99999997432      1123456889999999999999987511 1599999998877 4321              13


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCc-h--------hHH-HHHHHHHHcCCCCccccCCCCc
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTT-G--------NLV-AKLMIERFNGRLPGYIGYGNDR  205 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~-~--------~~~-~~~~~~~~~~~~~~~~~~~~~~  205 (334)
                      +.|+.+|.+.|.+.+.+.    ..|++++++||+.++++..... .        ... .......         ..+...
T Consensus       168 ~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  238 (274)
T 1ja9_A          168 ALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGL---------ANMNPL  238 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHH---------HHTSTT
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHH---------HhcCCC
Confidence            679999999999888765    3489999999999987631100 0        000 1111111         112234


Q ss_pred             eeeeeHHHHHHHHHHHhhcCC---CCCeEEecCC
Q 019878          206 FSFCHVDDVVDGHIAAMEKGR---SGERYLLTGE  236 (334)
Q Consensus       206 ~~~i~v~D~a~a~~~~~~~~~---~g~~~~i~g~  236 (334)
                      +.+++++|+|+++..++..+.   .|++|+++|.
T Consensus       239 ~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG  272 (274)
T 1ja9_A          239 KRIGYPADIGRAVSALCQEESEWINGQVIKLTGG  272 (274)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCccCHHHHHHHHHHHhCcccccccCcEEEecCC
Confidence            568999999999999997542   6889999753

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.91  E-value=9.9e-25  Score=187.62  Aligned_cols=210  Identities=16%  Similarity=0.148  Sum_probs=140.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----C-CCCCeEEEEcCCCChhhHHHHh--------cCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDAC--------FGCH   67 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~-~~~~v~~~~~Dl~d~~~~~~~~--------~~~d   67 (334)
                      ++||||||+|+||+++++.|+++|++|++++|+.++...+    . ...++.++.+|++|.+++.+++        .++|
T Consensus        15 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id   94 (266)
T 1xq1_A           15 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLD   94 (266)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCCCc
Confidence            3699999999999999999999999999999976432211    0 0126889999999998888776        4689


Q ss_pred             EEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHH----hcCCCcEEEEecccceeccCCCccCCCCCcccccc
Q 019878           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAK----ETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        68 ~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~  137 (334)
                      +|||+||....      ..+++...+++|+.++.++++++.    +. +.+++|++||...+....              
T Consensus        95 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~--------------  159 (266)
T 1xq1_A           95 ILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS-GCGNIIFMSSIAGVVSAS--------------  159 (266)
T ss_dssp             EEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SSCEEEEEC-----------------------
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEccchhccCCC--------------
Confidence            99999997432      122345678999999999999984    44 467999999987765322              


Q ss_pred             ccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHH
Q 019878          138 FCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                      +.+.|+.+|.+.|.+.+.+.    ++|++++++||+.++++.....   ....+.......        .....+++++|
T Consensus       160 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~--------~~~~~~~~~~d  228 (266)
T 1xq1_A          160 VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAV---YDDEFKKVVISR--------KPLGRFGEPEE  228 (266)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC------------------------------------CCGGG
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhh---cCHHHHHHHHhc--------CCCCCCcCHHH
Confidence            13679999999998888765    3499999999999999853211   101011111111        11235789999


Q ss_pred             HHHHHHHHhhcC---CCCCeEEecCC
Q 019878          214 VVDGHIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       214 ~a~a~~~~~~~~---~~g~~~~i~g~  236 (334)
                      +|+++..++...   ..|+++++.|.
T Consensus       229 va~~~~~l~~~~~~~~~G~~~~v~gG  254 (266)
T 1xq1_A          229 VSSLVAFLCMPAASYITGQTICVDGG  254 (266)
T ss_dssp             GHHHHHHHTSGGGTTCCSCEEECCCC
T ss_pred             HHHHHHHHcCccccCccCcEEEEcCC
Confidence            999999998653   35889999653

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.91  E-value=2.3e-24  Score=184.02  Aligned_cols=212  Identities=17%  Similarity=0.200  Sum_probs=151.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCe-EEEEcCCCChhhHHHHh------cCCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGAL-ELVYGDVTDYRSLVDAC------FGCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v-~~~~~Dl~d~~~~~~~~------~~~d~vih~   72 (334)
                      ++|||||+|+||+++++.|+++|++|++++|++++...+..  ..++ .++.+|++|.+++.+++      .++|+|||+
T Consensus        13 ~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~li~~   92 (254)
T 2wsb_A           13 CAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSILVNS   92 (254)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEEEEC
Confidence            59999999999999999999999999999998653221110  0145 88999999999888776      468999999


Q ss_pred             ccccCC--C----CCCcccchhhhhHHHHHHHHHHH----hcCCCcEEEEecccceeccCCCccCCCCCccccccccChH
Q 019878           73 AALVEP--W----LPDPSRFFAVNVEGLKNVVQAAK----ETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (334)
Q Consensus        73 a~~~~~--~----~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y  142 (334)
                      ||....  .    .++....+++|+.++.++++++.    +. +.+++|++||...+...+..            +.+.|
T Consensus        93 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~~------------~~~~Y  159 (254)
T 2wsb_A           93 AGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVAR-GAGAIVNLGSMSGTIVNRPQ------------FASSY  159 (254)
T ss_dssp             CCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCSSS------------CBHHH
T ss_pred             CccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEecchhccCCCCC------------cchHH
Confidence            997432  1    11235678899999777777664    33 46799999998776543211            12679


Q ss_pred             HHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHH
Q 019878          143 ERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGH  218 (334)
Q Consensus       143 ~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  218 (334)
                      +.+|.+.|.+.+.+.    ++|++++++||+.++++....... ............         ....+++++|+|+++
T Consensus       160 ~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~---------~~~~~~~~~dva~~~  229 (254)
T 2wsb_A          160 MASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRE-RPELFETWLDMT---------PMGRCGEPSEIAAAA  229 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHT-CHHHHHHHHHTS---------TTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhcccc-ChHHHHHHHhcC---------CCCCCCCHHHHHHHH
Confidence            999999999888765    348999999999999873210000 011222222221         123588999999999


Q ss_pred             HHHhhcC---CCCCeEEecCC
Q 019878          219 IAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       219 ~~~~~~~---~~g~~~~i~g~  236 (334)
                      ..++...   ..|+++++.|.
T Consensus       230 ~~l~~~~~~~~~G~~~~v~gG  250 (254)
T 2wsb_A          230 LFLASPAASYVTGAILAVDGG  250 (254)
T ss_dssp             HHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHhCcccccccCCEEEECCC
Confidence            9998653   36889999654

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.91  E-value=3e-24  Score=182.49  Aligned_cols=208  Identities=17%  Similarity=0.162  Sum_probs=143.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEE-EcCCCCCCCC----C-CCCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRAL-VRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~----~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      |+||||||+|+||+++++.|+++|++|+++ .|+++....+    . ...++.++.+|++|.+++.++++       ++|
T Consensus         6 ~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   85 (247)
T 2hq1_A            6 KTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGRID   85 (247)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            369999999999999999999999999999 4554322111    0 01268999999999999888775       699


Q ss_pred             EEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccc-eeccCCCccCCCCCcccccc
Q 019878           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFF-ALGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        68 ~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~-v~~~~~~~~~~e~~~~~~~~  137 (334)
                      +|||+||....      ..+++...+++|+.++.++++++.+.   .+.+++|++||.. .++...              
T Consensus        86 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------  151 (247)
T 2hq1_A           86 ILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAG--------------  151 (247)
T ss_dssp             EEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC-----------------------
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCC--------------
Confidence            99999997431      33456778999999998888887652   1467999999974 444211              


Q ss_pred             ccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHH
Q 019878          138 FCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                       .+.|+.+|.+.|.+.+.+.    ..|+++++++|+.+.++......   .........+ .        ....+++++|
T Consensus       152 -~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~-~--------~~~~~~~~~d  218 (247)
T 2hq1_A          152 -QANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLP---DKVKEMYLNN-I--------PLKRFGTPEE  218 (247)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC---HHHHHHHHTT-S--------TTSSCBCHHH
T ss_pred             -CcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcc---hHHHHHHHhh-C--------CCCCCCCHHH
Confidence             3679999999998887764    34899999999999775211001   1111111111 1        2235889999


Q ss_pred             HHHHHHHHhhcC---CCCCeEEecC
Q 019878          214 VVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       214 ~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +++++..++..+   ..|++|+++|
T Consensus       219 va~~~~~l~~~~~~~~~G~~~~v~g  243 (247)
T 2hq1_A          219 VANVVGFLASDDSNYITGQVINIDG  243 (247)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHcCcccccccCcEEEeCC
Confidence            999999988653   3688999965

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.91  E-value=1.2e-24  Score=184.63  Aligned_cols=209  Identities=20%  Similarity=0.157  Sum_probs=151.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEE-EcCCCCCCCCC-----CCCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRAL-VRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      ++||||||+|+||++++++|+++|++|+++ +|+++....+.     ...++.++.+|++|.+++.++++       ++|
T Consensus         2 k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   81 (244)
T 1edo_A            2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            579999999999999999999999999995 67643321110     01258899999999999888775       689


Q ss_pred             EEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        68 ~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      +|||+||....      ..++++..+++|+.++.++++++.+.   .+.+++|++||...+.+..              +
T Consensus        82 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------------~  147 (244)
T 1edo_A           82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNI--------------G  147 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT--------------T
T ss_pred             EEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCC--------------C
Confidence            99999997432      12234568899999999999988764   2467999999986654321              1


Q ss_pred             cChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      ...|+.+|.+.+.+.+.+.    ..|++++++||+.++++.....   ........ ....+        ...+++++|+
T Consensus       148 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~-~~~~~--------~~~~~~~~dv  215 (244)
T 1edo_A          148 QANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL---GEDMEKKI-LGTIP--------LGRTGQPENV  215 (244)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT---CHHHHHHH-HTSCT--------TCSCBCHHHH
T ss_pred             CccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhc---ChHHHHHH-hhcCC--------CCCCCCHHHH
Confidence            3679999998888777654    3589999999999998632111   11111111 12211        2348899999


Q ss_pred             HHHHHHHhhcC----CCCCeEEecC
Q 019878          215 VDGHIAAMEKG----RSGERYLLTG  235 (334)
Q Consensus       215 a~a~~~~~~~~----~~g~~~~i~g  235 (334)
                      |+++..++.++    ..|++|++.|
T Consensus       216 a~~~~~l~~~~~~~~~~G~~~~v~g  240 (244)
T 1edo_A          216 AGLVEFLALSPAASYITGQAFTIDG  240 (244)
T ss_dssp             HHHHHHHHHCSGGGGCCSCEEEEST
T ss_pred             HHHHHHHhCCCccCCcCCCEEEeCC
Confidence            99999998443    2588999965

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.91  E-value=6.3e-24  Score=181.48  Aligned_cols=211  Identities=18%  Similarity=0.179  Sum_probs=150.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-CCCeEEEEcCCCChhhHHHHhc-------CCCEEEEec
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-EGALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~a   73 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+++. ..+.. ... .++.+|++|.+++.++++       ++|+|||+|
T Consensus         8 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~A   85 (256)
T 2d1y_A            8 GVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLVNNA   85 (256)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            59999999999999999999999999999998764 22111 013 789999999988877764       589999999


Q ss_pred             cccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChHHH
Q 019878           74 ALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (334)
Q Consensus        74 ~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (334)
                      |....      ..+++...+++|+.++.++++++.+.   .+.+++|++||...+...+              +.+.|+.
T Consensus        86 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~--------------~~~~Y~~  151 (256)
T 2d1y_A           86 AIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQ--------------ENAAYNA  151 (256)
T ss_dssp             CCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCT--------------TBHHHHH
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCC--------------CChhHHH
Confidence            97432      11234568899999999999988653   2467999999987654321              1367999


Q ss_pred             HHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHH-cCCCCccccCCCCceeeeeHHHHHHHHH
Q 019878          145 SKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERF-NGRLPGYIGYGNDRFSFCHVDDVVDGHI  219 (334)
Q Consensus       145 sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~a~~  219 (334)
                      +|.+.+.+.+.+.    .+|+++.+++|+.+.++.       ....+.... .......+......+.+++++|+|+++.
T Consensus       152 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~  224 (256)
T 2d1y_A          152 SKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEA-------VLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVL  224 (256)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH-------HHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCch-------hhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            9999998887654    458999999999997642       111100000 0111111112223456899999999999


Q ss_pred             HHhhcC---CCCCeEEecC
Q 019878          220 AAMEKG---RSGERYLLTG  235 (334)
Q Consensus       220 ~~~~~~---~~g~~~~i~g  235 (334)
                      .++..+   ..|+++++.|
T Consensus       225 ~l~s~~~~~~~G~~~~v~g  243 (256)
T 2d1y_A          225 FLASEKASFITGAILPVDG  243 (256)
T ss_dssp             HHHSGGGTTCCSCEEEEST
T ss_pred             HHhCchhcCCCCCEEEECC
Confidence            998764   3688999964

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.91  E-value=3.6e-23  Score=176.14  Aligned_cols=212  Identities=18%  Similarity=0.142  Sum_probs=144.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~a~   74 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+.+..    .. ++.++.+|++|.+++.++++       ++|+|||+||
T Consensus         9 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~----~~-~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~Ag   83 (250)
T 2fwm_X            9 NVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE----QY-PFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAG   83 (250)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSS----CC-SSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhh----cC-CceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            699999999999999999999999999999987531    11 37889999999999888775       6899999999


Q ss_pred             ccCC------CCCCcccchhhhhHHHHHHHHHHH----hcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHH
Q 019878           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAK----ETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (334)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (334)
                      ....      ..++++..+++|+.++.++++++.    +. +.+++|++||...+.+..              +.+.|+.
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~~~~--------------~~~~Y~~  148 (250)
T 2fwm_X           84 ILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQ-RGGAIVTVASDAAHTPRI--------------GMSAYGA  148 (250)
T ss_dssp             CCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCCT--------------TCHHHHH
T ss_pred             cCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhc-CCCEEEEECchhhCCCCC--------------CCchHHH
Confidence            7432      122456688999999999999983    33 467999999987764321              1367999


Q ss_pred             HHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHH
Q 019878          145 SKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIA  220 (334)
Q Consensus       145 sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~  220 (334)
                      +|.+.+.+.+.+.    ++|++++++||+.++++....... -............. .+........+.+++|+|+++..
T Consensus       149 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~p~~~~~~p~dvA~~v~~  226 (250)
T 2fwm_X          149 SKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWV-SDDAEEQRIRGFGE-QFKLGIPLGKIARPQEIANTILF  226 (250)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------------------CHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCccCCEEEEEECCcccCcccccccc-ChhHHHHHHhhhhh-cccccCCCCCCcCHHHHHHHHHH
Confidence            9999998887754    359999999999999875321100 00000000000000 00001112347899999999999


Q ss_pred             HhhcC---CCCCeEEecC
Q 019878          221 AMEKG---RSGERYLLTG  235 (334)
Q Consensus       221 ~~~~~---~~g~~~~i~g  235 (334)
                      ++..+   ..|+++++.|
T Consensus       227 l~s~~~~~~tG~~i~vdG  244 (250)
T 2fwm_X          227 LASDLASHITLQDIVVDG  244 (250)
T ss_dssp             HHSGGGTTCCSCEEEEST
T ss_pred             HhCccccCCCCCEEEECC
Confidence            98763   3689999964

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.91  E-value=5.1e-25  Score=190.88  Aligned_cols=229  Identities=20%  Similarity=0.169  Sum_probs=166.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CCC----CCCeEEEEcCCCChhhHHHHhc-------CC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPS----EGALELVYGDVTDYRSLVDACF-------GC   66 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~----~~~v~~~~~Dl~d~~~~~~~~~-------~~   66 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+++....    +..    ...+.++.+|++|.+++.++++       ++
T Consensus        13 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   92 (281)
T 3svt_A           13 TYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGRL   92 (281)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            59999999999999999999999999999997643211    111    1268899999999998887765       58


Q ss_pred             CEEEEeccccCC-------CCCCcccchhhhhHHHHHHHHHHHhcC---CCcEEEEecccceeccCCCccCCCCCccccc
Q 019878           67 HVIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (334)
Q Consensus        67 d~vih~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~  136 (334)
                      |++||+||....       ..++++..+++|+.++.++++++.+..   +..++|++||...+.....            
T Consensus        93 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------  160 (281)
T 3svt_A           93 HGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRW------------  160 (281)
T ss_dssp             CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTT------------
T ss_pred             CEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCC------------
Confidence            999999996221       122345688999999999999887651   3349999999887754321            


Q ss_pred             cccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHH
Q 019878          137 YFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVD  212 (334)
Q Consensus       137 ~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  212 (334)
                        .+.|+.||.+.+.+.+.+.    .+|+++.+++|+.++++...... .............         ....+.+++
T Consensus       161 --~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~---------p~~r~~~~~  228 (281)
T 3svt_A          161 --FGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAIT-ESAELSSDYAMCT---------PLPRQGEVE  228 (281)
T ss_dssp             --CTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH-TCHHHHHHHHHHC---------SSSSCBCHH
T ss_pred             --ChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcc-cCHHHHHHHHhcC---------CCCCCCCHH
Confidence              3679999999998887754    45899999999999987421100 0011111111111         123467899


Q ss_pred             HHHHHHHHHhhcCC---CCCeEEec-CCCCC-HHHHHHHHHHHhCCC
Q 019878          213 DVVDGHIAAMEKGR---SGERYLLT-GENAS-FMQIFDMAAVITGTS  254 (334)
Q Consensus       213 D~a~a~~~~~~~~~---~g~~~~i~-g~~~s-~~e~~~~i~~~~g~~  254 (334)
                      |+|+++..++....   .|+++++. |..++ ..++.+.+.+..|.+
T Consensus       229 dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~  275 (281)
T 3svt_A          229 DVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRD  275 (281)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTT
T ss_pred             HHHHHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCc
Confidence            99999999987542   69999996 55555 778888888887765

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.91  E-value=5.6e-24  Score=181.03  Aligned_cols=203  Identities=17%  Similarity=0.138  Sum_probs=146.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc---------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF---------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~---------~~d~   68 (334)
                      +||||||+|+||+++++.|+++|  ++|++++|+.++...+..  ..++.++.+|++|.+++.++++         ++|+
T Consensus         5 ~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~id~   84 (250)
T 1yo6_A            5 SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSL   84 (250)
T ss_dssp             EEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCE
T ss_pred             EEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCCCcE
Confidence            59999999999999999999999  999999998765432211  2378999999999998888776         7999


Q ss_pred             EEEeccccC-C------CCCCcccchhhhhHHHHHHHHHHHhcC---------C-----CcEEEEecccceeccCCCccC
Q 019878           69 IFHTAALVE-P------WLPDPSRFFAVNVEGLKNVVQAAKETK---------T-----VEKIIYTSSFFALGSTDGYIA  127 (334)
Q Consensus        69 vih~a~~~~-~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~-----~~~~v~~Ss~~v~~~~~~~~~  127 (334)
                      |||+||... .      ..++....+++|+.++.++++++.+..         +     .+++|++||...+......  
T Consensus        85 li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~--  162 (250)
T 1yo6_A           85 LINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTS--  162 (250)
T ss_dssp             EEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCS--
T ss_pred             EEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCccc--
Confidence            999999754 1      112345678999999999999886541         2     5699999998776543210  


Q ss_pred             CCCCccccccccChHHHHHHHHHHHHHHHhh----cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCC
Q 019878          128 DENQVHEEKYFCTQYERSKAVADKIALQAAS----EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGN  203 (334)
Q Consensus       128 ~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (334)
                        .++   ..+...|+.+|++.+.+.+.+..    .|+++.++||+.+.++....                         
T Consensus       163 --~~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------------------------  212 (250)
T 1yo6_A          163 --GSA---QFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-------------------------  212 (250)
T ss_dssp             --TTS---SSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------------------
T ss_pred             --ccc---cCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-------------------------
Confidence              111   11246799999999998887653    48999999999997763210                         


Q ss_pred             CceeeeeHHHHHHHHHHHhhcCC---CCCeEEecCCCC
Q 019878          204 DRFSFCHVDDVVDGHIAAMEKGR---SGERYLLTGENA  238 (334)
Q Consensus       204 ~~~~~i~v~D~a~a~~~~~~~~~---~g~~~~i~g~~~  238 (334)
                        ..+++.+|+|++++.++....   .|.++.+.|..+
T Consensus       213 --~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~  248 (250)
T 1yo6_A          213 --NAALTVEQSTAELISSFNKLDNSHNGRFFMRNLKPY  248 (250)
T ss_dssp             --------HHHHHHHHHHHTTCCGGGTTCEEETTEEEC
T ss_pred             --CCCCCHHHHHHHHHHHHhcccccCCCeEEEECCcCC
Confidence              136789999999999998653   577776655433

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.91  E-value=1.7e-24  Score=183.80  Aligned_cols=208  Identities=14%  Similarity=0.151  Sum_probs=147.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEE-EcCCCCCCCCC-----CCCCeEE-EEcCCCChhhHHHHhc-------CCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRAL-VRRTSDISGLP-----SEGALEL-VYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~-----~~~~v~~-~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      +||||||+|+||++++++|+++|++|+++ +|+.++...+.     ...++.+ +.+|++|.+++.++++       ++|
T Consensus         3 ~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   82 (245)
T 2ph3_A            3 KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGLD   82 (245)
T ss_dssp             EEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTCCC
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCCCC
Confidence            69999999999999999999999999998 77654321110     0124566 8999999998887754       699


Q ss_pred             EEEEeccccCC------CCCCcccchhhhhHHHHHHHHH----HHhcCCCcEEEEecccceeccCCCccCCCCCcccccc
Q 019878           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQA----AKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        68 ~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~  137 (334)
                      +|||+||....      ..+++...+++|+.++.+++++    +++. +.+++|++||...+....              
T Consensus        83 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~--------------  147 (245)
T 2ph3_A           83 TLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKA-RFGRIVNITSVVGILGNP--------------  147 (245)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCTHHHHCCS--------------
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc-CCCEEEEEeChhhccCCC--------------
Confidence            99999997432      1223456889999995555554    4444 568999999986554321              


Q ss_pred             ccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHH
Q 019878          138 FCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                      +.+.|+.+|.+.+.+.+.+.    ..|++++++||+.++++......   ...........         ....+++++|
T Consensus       148 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~---------~~~~~~~~~d  215 (245)
T 2ph3_A          148 GQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLP---QEVKEAYLKQI---------PAGRFGRPEE  215 (245)
T ss_dssp             SBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC---HHHHHHHHHTC---------TTCSCBCHHH
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcC---HHHHHHHHhcC---------CCCCCcCHHH
Confidence            13679999998888877654    34899999999999886321111   11111111111         1235889999


Q ss_pred             HHHHHHHHhhcC---CCCCeEEecCC
Q 019878          214 VVDGHIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       214 ~a~a~~~~~~~~---~~g~~~~i~g~  236 (334)
                      +|+++..++..+   ..|++|++.|.
T Consensus       216 va~~~~~l~~~~~~~~~G~~~~v~gg  241 (245)
T 2ph3_A          216 VAEAVAFLVSEKAGYITGQTLCVDGG  241 (245)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHhCcccccccCCEEEECCC
Confidence            999999998754   25899999754

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.91  E-value=7.1e-24  Score=180.45  Aligned_cols=209  Identities=16%  Similarity=0.160  Sum_probs=149.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc---CCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF---GCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~---~~d~vih~a~~   75 (334)
                      ++||||||+|+||+++++.|+++|++|++++|+.++...+..  ...+.++.+|++|.+++.++++   ++|+|||+||.
T Consensus        15 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~Ag~   94 (249)
T 3f9i_A           15 KTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVCNAGI   94 (249)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEECCC-
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEECCCC
Confidence            369999999999999999999999999999998654322110  0268899999999999988886   58999999997


Q ss_pred             cC------CCCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHH
Q 019878           76 VE------PWLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (334)
Q Consensus        76 ~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK  146 (334)
                      ..      ...++++..+++|+.++.++++++...   .+..++|++||...+.....              .+.|+.+|
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~~sK  160 (249)
T 3f9i_A           95 TSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPG--------------QANYCASK  160 (249)
T ss_dssp             ------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSC--------------SHHHHHHH
T ss_pred             CCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCC--------------CchhHHHH
Confidence            43      233456778999999999998888543   24569999999887754321              36799999


Q ss_pred             HHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHh
Q 019878          147 AVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAM  222 (334)
Q Consensus       147 ~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~  222 (334)
                      ++.+.+.+.+.    .+|+++.+++||.+.++.......   ........+         .....+.+++|+|+++..++
T Consensus       161 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~  228 (249)
T 3f9i_A          161 AGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNE---KQREAIVQK---------IPLGTYGIPEDVAYAVAFLA  228 (249)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCH---HHHHHHHHH---------CTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCH---HHHHHHHhc---------CCCCCCcCHHHHHHHHHHHc
Confidence            98888777654    458999999999998875322211   111111111         12345888999999999998


Q ss_pred             hcCC---CCCeEEecC
Q 019878          223 EKGR---SGERYLLTG  235 (334)
Q Consensus       223 ~~~~---~g~~~~i~g  235 (334)
                      ....   .|+++++.|
T Consensus       229 s~~~~~~tG~~~~vdg  244 (249)
T 3f9i_A          229 SNNASYITGQTLHVNG  244 (249)
T ss_dssp             SGGGTTCCSCEEEEST
T ss_pred             CCccCCccCcEEEECC
Confidence            7542   599999965

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.91  E-value=1.7e-23  Score=177.83  Aligned_cols=210  Identities=17%  Similarity=0.154  Sum_probs=153.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHh---cCCCEEEEeccccC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC---FGCHVIFHTAALVE   77 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~---~~~d~vih~a~~~~   77 (334)
                      +++|||||+|+||+++++.|+++|++|++++|++++...+....++.++.+|++|.+++.++.   .++|+|||+||...
T Consensus         7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag~~~   86 (246)
T 2ag5_A            7 KVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGFVH   86 (246)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCccCC
Confidence            359999999999999999999999999999998654433222236899999999999887665   46899999999743


Q ss_pred             C------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHH
Q 019878           78 P------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAV  148 (334)
Q Consensus        78 ~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~  148 (334)
                      .      ..++++..+++|+.++.++++++.+.   .+.+++|++||...+.....             +.+.|+.+|.+
T Consensus        87 ~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------~~~~Y~~sK~a  153 (246)
T 2ag5_A           87 HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVV-------------NRCVYSTTKAA  153 (246)
T ss_dssp             CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCT-------------TBHHHHHHHHH
T ss_pred             CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCC-------------CCccHHHHHHH
Confidence            2      11234567899999999999998642   14679999999876543210             13679999999


Q ss_pred             HHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHH------HHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHH
Q 019878          149 ADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLV------AKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGH  218 (334)
Q Consensus       149 ~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  218 (334)
                      .+.+.+.+.    ++|++++++||+.++++..   ...+      ...........         ....+.+++|+|+++
T Consensus       154 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~---~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dvA~~v  221 (246)
T 2ag5_A          154 VIGLTKSVAADFIQQGIRCNCVCPGTVDTPSL---QERIQARGNPEEARNDFLKRQ---------KTGRFATAEEIAMLC  221 (246)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEESCEECHHH---HHHHHHSSSHHHHHHHHHHTC---------TTSSCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEeeCcCcCcch---hhhhhcccCcHHHHHHHHhcC---------CCCCCCCHHHHHHHH
Confidence            998887754    3599999999999998731   1101      11111111111         112478999999999


Q ss_pred             HHHhhcC---CCCCeEEecC
Q 019878          219 IAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       219 ~~~~~~~---~~g~~~~i~g  235 (334)
                      ..++...   ..|+++++.|
T Consensus       222 ~~l~s~~~~~~tG~~i~vdg  241 (246)
T 2ag5_A          222 VYLASDESAYVTGNPVIIDG  241 (246)
T ss_dssp             HHHHSGGGTTCCSCEEEECT
T ss_pred             HHHhCccccCCCCCEEEECC
Confidence            9998653   3689999964

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.91  E-value=8.7e-24  Score=181.56  Aligned_cols=215  Identities=18%  Similarity=0.205  Sum_probs=154.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CC--CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LP--SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~--~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      +||||||+|+||++++++|+++|++|++++|+..+...    +.  ...++.++.+|++|.+++.++++       .+|+
T Consensus        16 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   95 (265)
T 1h5q_A           16 TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISG   95 (265)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            59999999999999999999999999999997653211    00  01268999999999998877764       3899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc----CCCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      |||+||....      ..++++..+++|+.++.++++++.+.    +..+++|++||...+.......       .+..+
T Consensus        96 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~-------~~~~~  168 (265)
T 1h5q_A           96 LIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL-------NGSLT  168 (265)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEET-------TEECS
T ss_pred             EEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccc-------ccccc
Confidence            9999997432      11234557899999999999998654    2246999999987664322100       11122


Q ss_pred             cChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      .+.|+.+|.+.|.+.+.+.    ++|++++++||+.++++......   .......... .        ....+++++|+
T Consensus       169 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~-~--------~~~~~~~~~dv  236 (265)
T 1h5q_A          169 QVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMD---KKIRDHQASN-I--------PLNRFAQPEEM  236 (265)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC---HHHHHHHHHT-C--------TTSSCBCGGGG
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccc---hhHHHHHHhc-C--------cccCCCCHHHH
Confidence            4779999999998888765    34899999999999987532111   1111111111 1        11247899999


Q ss_pred             HHHHHHHhhcC---CCCCeEEecC
Q 019878          215 VDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       215 a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      |+++..++..+   ..|++|++.|
T Consensus       237 a~~~~~l~~~~~~~~~G~~~~v~g  260 (265)
T 1h5q_A          237 TGQAILLLSDHATYMTGGEYFIDG  260 (265)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEECT
T ss_pred             HHHHHhhccCchhcCcCcEEEecC
Confidence            99999998754   3689999964

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.91  E-value=2.1e-23  Score=179.64  Aligned_cols=209  Identities=17%  Similarity=0.117  Sum_probs=155.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+.......  ..++.++.+|++|.+++.++++       ++|++||+
T Consensus        13 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~n   92 (271)
T 3tzq_B           13 VAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNN   92 (271)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            59999999999999999999999999999998765322110  1268899999999999888776       68999999


Q ss_pred             ccccCC--------CCCCcccchhhhhHHHHHHHHHH----HhcCCCcEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           73 AALVEP--------WLPDPSRFFAVNVEGLKNVVQAA----KETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        73 a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      ||....        ..++++..+++|+.++.++++++    ++. +..++|++||...+.....              .+
T Consensus        93 Ag~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~~~~--------------~~  157 (271)
T 3tzq_B           93 AAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISA-GGGAIVNISSATAHAAYDM--------------ST  157 (271)
T ss_dssp             CCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEEEEECCGGGTSBCSS--------------CH
T ss_pred             CCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEECCHHHcCCCCC--------------Ch
Confidence            997522        11234568899999999999999    444 4679999999877654321              36


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHH
Q 019878          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVD  216 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  216 (334)
                      .|+.+|.+.+.+.+.+.    ++|+++.+++||.++++.....  .......... ...+        ...+..++|+|+
T Consensus       158 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~-~~~~--------~~r~~~p~dvA~  226 (271)
T 3tzq_B          158 AYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVG--LPQPIVDIFA-THHL--------AGRIGEPHEIAE  226 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC-----CHHHHHHHH-TTST--------TSSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCcccccc--CCHHHHHHHH-hcCC--------CCCCcCHHHHHH
Confidence            79999999998887654    4699999999999999864311  1112222222 2211        123678999999


Q ss_pred             HHHHHhhcC---CCCCeEEecCC
Q 019878          217 GHIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       217 a~~~~~~~~---~~g~~~~i~g~  236 (334)
                      ++..++...   -.|+++++.|.
T Consensus       227 ~v~~L~s~~~~~itG~~i~vdGG  249 (271)
T 3tzq_B          227 LVCFLASDRAAFITGQVIAADSG  249 (271)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHhCcccCCcCCCEEEECCC
Confidence            999998754   36999999643

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.91  E-value=4.6e-24  Score=184.67  Aligned_cols=217  Identities=17%  Similarity=0.190  Sum_probs=150.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCC-CCCC----CC--CCCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DISG----LP--SEGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~----~~--~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+.. ....    +.  ....+.++.+|++|.+++.++++       ++|
T Consensus        27 ~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  106 (281)
T 3v2h_A           27 TAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFGGAD  106 (281)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTSSCS
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCCCCC
Confidence            5999999999999999999999999999998432 1110    00  01368999999999998887775       689


Q ss_pred             EEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        68 ~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      +|||+||....      ..+++...+++|+.++.++++++.+.   .+..++|++||...+.....              
T Consensus       107 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------  172 (281)
T 3v2h_A          107 ILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPF--------------  172 (281)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT--------------
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCC--------------
Confidence            99999997432      22334568899999999999998432   14568999999876643321              


Q ss_pred             cChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHH-HHH--cCCCCccccCCCCceeeeeH
Q 019878          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMI-ERF--NGRLPGYIGYGNDRFSFCHV  211 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~i~v  211 (334)
                      .+.|+.+|.+.+.+.+.+.    ++|+++..++||.+.++.....   ...... ...  .......+..+...+.++++
T Consensus       173 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~  249 (281)
T 3v2h_A          173 KSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQ---IPDQARTRGITEEQVINEVMLKGQPTKKFITV  249 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-------------------------------CCTTCSCBCH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhh---cchhhhhcCCCHHHHHHHHHHhcCCCCCccCH
Confidence            3679999999888877654    4589999999999998753211   110000 000  00000112334455679999


Q ss_pred             HHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          212 DDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       212 ~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +|+|+++..++...   ..|+++++.|
T Consensus       250 edvA~~v~~L~s~~a~~itG~~i~vdG  276 (281)
T 3v2h_A          250 EQVASLALYLAGDDAAQITGTHVSMDG  276 (281)
T ss_dssp             HHHHHHHHHHHSSGGGGCCSCEEEEST
T ss_pred             HHHHHHHHHHcCCCcCCCCCcEEEECC
Confidence            99999999998754   3699999965

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.91  E-value=1e-23  Score=180.98  Aligned_cols=206  Identities=21%  Similarity=0.148  Sum_probs=152.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC----CCCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS----GLPSEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vi   70 (334)
                      ++|||||+|+||+++++.|+++|++|++++|++++..    .+..  ++.++.+|++|.+++.++++       ++|+||
T Consensus        14 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~lv   91 (263)
T 3ak4_A           14 KAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLEN--GGFAVEVDVTKRASVDAAMQKAIDALGGFDLLC   91 (263)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTT--CCEEEECCTTCHHHHHHHHHHHHHHHTCCCEEE
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--CCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            6999999999999999999999999999999864322    1221  57889999999999888776       699999


Q ss_pred             EeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CC-CcEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        71 h~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      |+||....      ..+++...+++|+.++.++++++.+.   .+ ..++|++||...+...+              +..
T Consensus        92 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------~~~  157 (263)
T 3ak4_A           92 ANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAP--------------LLA  157 (263)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCT--------------TCH
T ss_pred             ECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCC--------------Cch
Confidence            99997432      11234568899999999999988764   12 57999999987654321              136


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHH-----------HHHHHHHHcCCCCccccCCCCc
Q 019878          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLV-----------AKLMIERFNGRLPGYIGYGNDR  205 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~  205 (334)
                      .|+.+|.+.+.+.+.+.    ++|++++++||+.++++..   ....           ..........         ...
T Consensus       158 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~---~~~~~~~~~~~~~~~~~~~~~~~~~---------~p~  225 (263)
T 3ak4_A          158 HYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQ---EREIIWEAELRGMTPEAVRAEYVSL---------TPL  225 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHH---HHHHHHHHHHHTSCHHHHHHHHHHT---------CTT
T ss_pred             hHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhh---hhhccccccccccCcHHHHHHHHhc---------CCC
Confidence            79999999988877654    3599999999999988631   1111           0111111111         122


Q ss_pred             eeeeeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          206 FSFCHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       206 ~~~i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      ..+++++|+|+++..++..+   ..|+++++.|
T Consensus       226 ~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdg  258 (263)
T 3ak4_A          226 GRIEEPEDVADVVVFLASDAARFMTGQGINVTG  258 (263)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             CCCcCHHHHHHHHHHHhCccccCCCCCEEEECc
Confidence            35889999999999998754   3688999964

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.91  E-value=2.4e-23  Score=178.56  Aligned_cols=204  Identities=19%  Similarity=0.135  Sum_probs=151.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~a   73 (334)
                      +++|||||+|+||+++++.|+++|++|++++|+++.      ..++.++.+|++|.+++.++++       ++|+|||+|
T Consensus         9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~A   82 (264)
T 2dtx_A            9 KVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNA   82 (264)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            369999999999999999999999999999998764      1268899999999998887775       599999999


Q ss_pred             cccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChHHH
Q 019878           74 ALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (334)
Q Consensus        74 ~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (334)
                      |....      ..+++...+++|+.++.++++++.+.   .+.+++|++||...+....              +.+.|+.
T Consensus        83 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------~~~~Y~~  148 (264)
T 2dtx_A           83 GIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITK--------------NASAYVT  148 (264)
T ss_dssp             CCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCT--------------TBHHHHH
T ss_pred             CCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCC--------------CchhHHH
Confidence            97432      12245668899999999999988764   2357999999987765322              1367999


Q ss_pred             HHHHHHHHHHHHhh-cC--CCEEEEecCceecCCCCCchhHH-------H----HHHHHHHcCCCCccccCCCCceeeee
Q 019878          145 SKAVADKIALQAAS-EG--LPIVPVYPGVIYGPGKLTTGNLV-------A----KLMIERFNGRLPGYIGYGNDRFSFCH  210 (334)
Q Consensus       145 sK~~~E~~~~~~~~-~g--~~~~ilR~~~v~G~~~~~~~~~~-------~----~~~~~~~~~~~~~~~~~~~~~~~~i~  210 (334)
                      +|.+.+.+.+.+.. .+  +++++++|+.+.++..   ....       .    ........         ......+++
T Consensus       149 sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~---~~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~~~~~  216 (264)
T 2dtx_A          149 SKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLV---RKAAELEVGSDPMRIEKKISEWGH---------EHPMQRIGK  216 (264)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHH---HHHHHHHHCSCHHHHHHHHHHHHH---------HSTTSSCBC
T ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcch---hhhhhcccccCchhhHHHHHHHHh---------cCCCCCCcC
Confidence            99999988887652 22  8999999999976521   0110       0    11111111         012235889


Q ss_pred             HHHHHHHHHHHhhcC---CCCCeEEecCC
Q 019878          211 VDDVVDGHIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       211 v~D~a~a~~~~~~~~---~~g~~~~i~g~  236 (334)
                      ++|+|+++..++...   ..|+++++.|.
T Consensus       217 p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  245 (264)
T 2dtx_A          217 PQEVASAVAFLASREASFITGTCLYVDGG  245 (264)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHHhCchhcCCCCcEEEECCC
Confidence            999999999998753   36899999653

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.90  E-value=1.8e-23  Score=179.24  Aligned_cols=210  Identities=17%  Similarity=0.162  Sum_probs=151.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEc-CCCCCCCC----C-CCCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~----~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      ++||||||+|+||+++++.|+++|++|++++| +.+....+    . ...++.++.+|++|.+++.++++       ++|
T Consensus         8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   87 (261)
T 1gee_A            8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLD   87 (261)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            36999999999999999999999999999999 54321110    0 01257899999999998887775       689


Q ss_pred             EEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CC-CcEEEEecccceeccCCCccCCCCCcccccc
Q 019878           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KT-VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        68 ~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~-~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~  137 (334)
                      +|||+||....      ..++++..+++|+.++.++++++.+.   .+ .+++|++||...+.+..              
T Consensus        88 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------------  153 (261)
T 1gee_A           88 VMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWP--------------  153 (261)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCT--------------
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCC--------------
Confidence            99999997432      12234568899999999988887654   12 56999999976653221              


Q ss_pred             ccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHH--HHHHHHHHcCCCCccccCCCCceeeeeH
Q 019878          138 FCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLV--AKLMIERFNGRLPGYIGYGNDRFSFCHV  211 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v  211 (334)
                      +.+.|+.+|.+.+.+.+.+.    ++|++++++||+.++++...   ...  ........ ...        ....++++
T Consensus       154 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~---~~~~~~~~~~~~~-~~~--------~~~~~~~~  221 (261)
T 1gee_A          154 LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINA---EKFADPEQRADVE-SMI--------PMGYIGEP  221 (261)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGH---HHHHSHHHHHHHH-TTC--------TTSSCBCH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhh---hcccChhHHHHHH-hcC--------CCCCCcCH
Confidence            13679999998888777654    45899999999999987421   111  11111111 111        12357899


Q ss_pred             HHHHHHHHHHhhcC---CCCCeEEecCC
Q 019878          212 DDVVDGHIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       212 ~D~a~a~~~~~~~~---~~g~~~~i~g~  236 (334)
                      +|+|+++..++...   ..|+++++.|.
T Consensus       222 ~dva~~~~~l~~~~~~~~~G~~~~v~gg  249 (261)
T 1gee_A          222 EEIAAVAAWLASSEASYVTGITLFADGG  249 (261)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHhCccccCCCCcEEEEcCC
Confidence            99999999998653   36889999653

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.90  E-value=1.4e-23  Score=179.00  Aligned_cols=208  Identities=15%  Similarity=0.122  Sum_probs=149.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCEEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih   71 (334)
                      +++|||||+|+||.++++.|+++|++|++++|+.++...+..  ..++.++.+|++|.+++.++++       ++|+|||
T Consensus         6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~   85 (254)
T 1hdc_A            6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVN   85 (254)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            469999999999999999999999999999998643221100  1258899999999999888776       6999999


Q ss_pred             eccccCC------CCCCcccchhhhhHHHHHHHHH----HHhcCCCcEEEEecccceeccCCCccCCCCCccccccccCh
Q 019878           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQA----AKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (334)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  141 (334)
                      +||....      ..+++...+++|+.++..+++.    +++. +.+++|++||...+...+              +.+.
T Consensus        86 nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~--------------~~~~  150 (254)
T 1hdc_A           86 NAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-GGGSIVNISSAAGLMGLA--------------LTSS  150 (254)
T ss_dssp             CCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCT--------------TCHH
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECchhhccCCC--------------Cchh
Confidence            9997432      1223556889999999855555    4444 467999999987764322              1367


Q ss_pred             HHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeee-eHHHHHH
Q 019878          142 YERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFC-HVDDVVD  216 (334)
Q Consensus       142 Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~v~D~a~  216 (334)
                      |+.+|.+.+.+.+.+.    ++|++++++||+.++++..       ..    . ................+. +++|+|+
T Consensus       151 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~-------~~----~-~~~~~~~~~~~~p~~~~~~~~~dvA~  218 (254)
T 1hdc_A          151 YGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMT-------AE----T-GIRQGEGNYPNTPMGRVGNEPGEIAG  218 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH-------HH----H-TCCCSTTSCTTSTTSSCB-CHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccc-------cc----c-chhHHHHHHhcCCCCCCCCCHHHHHH
Confidence            9999999988877654    4589999999999987621       11    0 111000011111223467 9999999


Q ss_pred             HHHHHhhcC---CCCCeEEecC
Q 019878          217 GHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       217 a~~~~~~~~---~~g~~~~i~g  235 (334)
                      ++..++..+   ..|+++++.|
T Consensus       219 ~v~~l~s~~~~~~tG~~~~vdg  240 (254)
T 1hdc_A          219 AVVKLLSDTSSYVTGAELAVDG  240 (254)
T ss_dssp             HHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHhCchhcCCCCCEEEECC
Confidence            999998754   3689999964

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.90  E-value=1.1e-23  Score=180.82  Aligned_cols=209  Identities=22%  Similarity=0.197  Sum_probs=152.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      +||||||+|+||+++++.|+++|++|++++|+.++...+..  ..++.++.+|++|.+++.++++       ++|+|||+
T Consensus        14 ~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~   93 (265)
T 2o23_A           14 VAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNC   93 (265)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEEC
Confidence            69999999999999999999999999999998764322110  1268999999999999888876       79999999


Q ss_pred             ccccCC------------CCCCcccchhhhhHHHHHHHHHHHhcC---------CCcEEEEecccceeccCCCccCCCCC
Q 019878           73 AALVEP------------WLPDPSRFFAVNVEGLKNVVQAAKETK---------TVEKIIYTSSFFALGSTDGYIADENQ  131 (334)
Q Consensus        73 a~~~~~------------~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~~v~~Ss~~v~~~~~~~~~~e~~  131 (334)
                      ||....            ..+++...+++|+.++.++++++.+..         +..++|++||...+.+...       
T Consensus        94 Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------  166 (265)
T 2o23_A           94 AGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVG-------  166 (265)
T ss_dssp             CCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTT-------
T ss_pred             CccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCCC-------
Confidence            997432            112345688999999999999998751         3568999999887754321       


Q ss_pred             ccccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCcee
Q 019878          132 VHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFS  207 (334)
Q Consensus       132 ~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (334)
                             ...|+.+|.+.+.+.+.+.    +.|+++++++|+.+.++.....    ............+       ....
T Consensus       167 -------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----~~~~~~~~~~~~~-------~~~~  228 (265)
T 2o23_A          167 -------QAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL----PEKVCNFLASQVP-------FPSR  228 (265)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC--------------CHHHHTCS-------SSCS
T ss_pred             -------CchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCcccccc----CHHHHHHHHHcCC-------CcCC
Confidence                   3679999998888777654    4589999999999988743211    1100001111111       0024


Q ss_pred             eeeHHHHHHHHHHHhhcCC-CCCeEEecC
Q 019878          208 FCHVDDVVDGHIAAMEKGR-SGERYLLTG  235 (334)
Q Consensus       208 ~i~v~D~a~a~~~~~~~~~-~g~~~~i~g  235 (334)
                      +++++|+|+++..++.++. .|+++++.|
T Consensus       229 ~~~~~dva~~~~~l~~~~~~~G~~i~vdg  257 (265)
T 2o23_A          229 LGDPAEYAHLVQAIIENPFLNGEVIRLDG  257 (265)
T ss_dssp             CBCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             CCCHHHHHHHHHHHhhcCccCceEEEECC
Confidence            7899999999999987654 688999964

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.90  E-value=2.5e-23  Score=180.21  Aligned_cols=218  Identities=17%  Similarity=0.151  Sum_probs=154.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC---------C--------CCCCCeEEEEcCCCChhhHHHHhc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG---------L--------PSEGALELVYGDVTDYRSLVDACF   64 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------~--------~~~~~v~~~~~Dl~d~~~~~~~~~   64 (334)
                      ++|||||+|+||.++++.|+++|++|++++|++.....         +        ....++.++.+|++|.+++.++++
T Consensus        12 ~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   91 (281)
T 3s55_A           12 TALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESFVA   91 (281)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence            59999999999999999999999999999997532110         0        001368899999999998887775


Q ss_pred             -------CCCEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCC
Q 019878           65 -------GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIAD  128 (334)
Q Consensus        65 -------~~d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~  128 (334)
                             ++|++||+||....      ..++++..+++|+.++.++++++...   .+..++|++||...+.....    
T Consensus        92 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----  167 (281)
T 3s55_A           92 EAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFA----  167 (281)
T ss_dssp             HHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCTT----
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCCCC----
Confidence                   69999999997432      22234668899999999999997442   14569999999877643321    


Q ss_pred             CCCccccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCC-----Cccc
Q 019878          129 ENQVHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRL-----PGYI  199 (334)
Q Consensus       129 e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~-----~~~~  199 (334)
                                ...|+.+|.+.+.+.+.+.    ++|+++..++|+.++++.....  .....+........     ....
T Consensus       168 ----------~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  235 (281)
T 3s55_A          168 ----------QASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHND--FVFGTMRPDLEKPTLKDVESVFA  235 (281)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSH--HHHHC-------CCHHHHHHHHH
T ss_pred             ----------CchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccch--hhhccccccccccchhHHHHHHH
Confidence                      3679999999998887765    3589999999999999864321  10000000000000     0000


Q ss_pred             cCCCCceeeeeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          200 GYGNDRFSFCHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       200 ~~~~~~~~~i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      ......+.+.+++|+|+++..++...   ..|+++++.|
T Consensus       236 ~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdg  274 (281)
T 3s55_A          236 SLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDA  274 (281)
T ss_dssp             HHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             hhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECC
Confidence            11223357899999999999998764   3599999964

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.90  E-value=9.4e-24  Score=180.86  Aligned_cols=213  Identities=15%  Similarity=0.082  Sum_probs=154.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----C-CCCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+.++...+    . ...++.++.+|++|.+++.++++       ++|+|
T Consensus        16 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   95 (260)
T 2zat_A           16 VALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDIL   95 (260)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            599999999999999999999999999999986432211    0 01258889999999998877765       69999


Q ss_pred             EEeccccCC-------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           70 FHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        70 ih~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      ||+||....       ..+++...+++|+.++.++++++.+.   .+.+++|++||...+.+..              +.
T Consensus        96 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------~~  161 (260)
T 2zat_A           96 VSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFP--------------NL  161 (260)
T ss_dssp             EECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT--------------TB
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCC--------------Cc
Confidence            999996421       11234568899999999999887532   2567999999988875432              13


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHH-HHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLV-AKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      +.|+.+|.+.+.+.+.+.    ++|+++.+++|+.+.++...   ... ..........        ....+.+.+++|+
T Consensus       162 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~---~~~~~~~~~~~~~~--------~~~~~~~~~~~dv  230 (260)
T 2zat_A          162 GPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQ---VLWMDKARKEYMKE--------SLRIRRLGNPEDC  230 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTH---HHHSSHHHHHHHHH--------HHTCSSCBCGGGG
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccch---hcccChHHHHHHHh--------cCCCCCCCCHHHH
Confidence            679999999998887754    35899999999999887421   100 0000000100        0122358899999


Q ss_pred             HHHHHHHhhcC---CCCCeEEec-CCCCC
Q 019878          215 VDGHIAAMEKG---RSGERYLLT-GENAS  239 (334)
Q Consensus       215 a~a~~~~~~~~---~~g~~~~i~-g~~~s  239 (334)
                      |+++..++..+   ..|+++++. |...+
T Consensus       231 a~~v~~l~s~~~~~~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          231 AGIVSFLCSEDASYITGETVVVGGGTASR  259 (260)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred             HHHHHHHcCcccCCccCCEEEECCCcccc
Confidence            99999998754   268999996 55444

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.90  E-value=9.7e-24  Score=180.68  Aligned_cols=203  Identities=21%  Similarity=0.215  Sum_probs=150.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+.++...+..  ...+.++.+|++|.+++.++++       ++|+|||+
T Consensus         9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~   88 (260)
T 1nff_A            9 VALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNN   88 (260)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            59999999999999999999999999999998643221100  0147889999999999888876       79999999


Q ss_pred             ccccCC------CCCCcccchhhhhHHHHHHHHHHH----hcCCCcEEEEecccceeccCCCccCCCCCccccccccChH
Q 019878           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAK----ETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (334)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y  142 (334)
                      ||....      ..+++...+++|+.++.++++++.    +. +.+++|++||...+...+              +...|
T Consensus        89 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~--------------~~~~Y  153 (260)
T 1nff_A           89 AGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA-GRGSIINISSIEGLAGTV--------------ACHGY  153 (260)
T ss_dssp             CCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCT--------------TBHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEEeehhhcCCCC--------------CchhH
Confidence            997432      122345688999999976666654    44 467999999988765322              13679


Q ss_pred             HHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHH
Q 019878          143 ERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGH  218 (334)
Q Consensus       143 ~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  218 (334)
                      +.+|.+.+.+.+.+.    ++|++++++||+.++++...    .         ....  +.  ......+.+++|+|+++
T Consensus       154 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~----~---------~~~~--~~--~~~~~~~~~~~dvA~~v  216 (260)
T 1nff_A          154 TATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD----W---------VPED--IF--QTALGRAAEPVEVSNLV  216 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT----T---------SCTT--CS--CCSSSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc----c---------chhh--HH--hCccCCCCCHHHHHHHH
Confidence            999999998887754    35999999999999987421    0         0000  00  11223578999999999


Q ss_pred             HHHhhcC---CCCCeEEecCC
Q 019878          219 IAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       219 ~~~~~~~---~~g~~~~i~g~  236 (334)
                      ..++...   ..|+++++.|.
T Consensus       217 ~~l~s~~~~~~~G~~~~v~gG  237 (260)
T 1nff_A          217 VYLASDESSYSTGAEFVVDGG  237 (260)
T ss_dssp             HHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHhCccccCCcCCEEEECCC
Confidence            9998653   35899999653

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.90  E-value=7.9e-23  Score=173.62  Aligned_cols=207  Identities=19%  Similarity=0.187  Sum_probs=153.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCC-CCCC----CC-CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~----~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.. ....    +. ...++.++.+|++|.+++.++++       ++|+
T Consensus         6 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   85 (246)
T 3osu_A            6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDV   85 (246)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5999999999999999999999999999888542 1110    00 01268899999999999888775       6899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHH----HhcCCCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAA----KETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      +||+||....      ..++++..+++|+.++.++++++    ++. +..++|++||...+...+.              
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~--------------  150 (246)
T 3osu_A           86 LVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQ-RSGAIINLSSVVGAVGNPG--------------  150 (246)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHHCCTT--------------
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEEcchhhcCCCCC--------------
Confidence            9999997432      22234568899999999999999    444 4579999999876643321              


Q ss_pred             cChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      .+.|+.+|.+.+.+.+.+.    ++|+++.+++|+.+.++......   .........+.         ....+.+++|+
T Consensus       151 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~---~~~~~~~~~~~---------p~~r~~~~~dv  218 (246)
T 3osu_A          151 QANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALS---DELKEQMLTQI---------PLARFGQDTDI  218 (246)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSC---HHHHHHHHTTC---------TTCSCBCHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccC---HHHHHHHHhcC---------CCCCCcCHHHH
Confidence            3679999998888777654    46899999999999998643222   22222222222         22347789999


Q ss_pred             HHHHHHHhhcCC---CCCeEEecC
Q 019878          215 VDGHIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       215 a~a~~~~~~~~~---~g~~~~i~g  235 (334)
                      |+++..++....   .|+++++.|
T Consensus       219 a~~v~~l~s~~~~~itG~~i~vdg  242 (246)
T 3osu_A          219 ANTVAFLASDKAKYITGQTIHVNG  242 (246)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHhCccccCCCCCEEEeCC
Confidence            999999987542   599999965

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.90  E-value=2.2e-23  Score=180.14  Aligned_cols=208  Identities=17%  Similarity=0.159  Sum_probs=152.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEc-CCCCCCCCCC------CCCeEEEEcCCCCh----hhHHHHhc------
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISGLPS------EGALELVYGDVTDY----RSLVDACF------   64 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~------~~~v~~~~~Dl~d~----~~~~~~~~------   64 (334)
                      ++|||||+|+||.++++.|+++|++|++++| +.+....+..      ..++.++.+|++|.    +++.++++      
T Consensus        13 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~   92 (276)
T 1mxh_A           13 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   92 (276)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHHHhc
Confidence            5999999999999999999999999999999 5432211100      12688999999999    88877765      


Q ss_pred             -CCCEEEEeccccCCC------C-----------CCcccchhhhhHHHHHHHHHHHhcC--CC------cEEEEecccce
Q 019878           65 -GCHVIFHTAALVEPW------L-----------PDPSRFFAVNVEGLKNVVQAAKETK--TV------EKIIYTSSFFA  118 (334)
Q Consensus        65 -~~d~vih~a~~~~~~------~-----------~~~~~~~~~n~~~~~~l~~~~~~~~--~~------~~~v~~Ss~~v  118 (334)
                       ++|+|||+||.....      .           +++...+++|+.++.++++++.+..  +.      +++|++||...
T Consensus        93 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~  172 (276)
T 1mxh_A           93 GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT  172 (276)
T ss_dssp             SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGG
T ss_pred             CCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECchhh
Confidence             689999999974321      1           2334678999999999999998852  23      69999999887


Q ss_pred             eccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCC
Q 019878          119 LGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGR  194 (334)
Q Consensus       119 ~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~  194 (334)
                      +.+..              +...|+.+|.+.+.+.+.+.    ++|+++.+++|+.++++ .. ..   .......... 
T Consensus       173 ~~~~~--------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~~-~~---~~~~~~~~~~-  232 (276)
T 1mxh_A          173 DLPLP--------------GFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-PA-MP---QETQEEYRRK-  232 (276)
T ss_dssp             GSCCT--------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-SS-SC---HHHHHHHHTT-
T ss_pred             cCCCC--------------CCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-cc-CC---HHHHHHHHhc-
Confidence            75322              13679999999998887654    35899999999999998 21 11   1122222221 


Q ss_pred             CCccccCCCCceeeeeHHHHHHHHHHHhhcC---CCCCeEEecCC
Q 019878          195 LPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       195 ~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~---~~g~~~~i~g~  236 (334)
                      .+       ..+++.+++|+|++++.++...   ..|+++++.|.
T Consensus       233 ~p-------~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG  270 (276)
T 1mxh_A          233 VP-------LGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGG  270 (276)
T ss_dssp             CT-------TTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CC-------CCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCc
Confidence            11       1123789999999999998753   25889999653

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.90  E-value=3.9e-23  Score=176.42  Aligned_cols=207  Identities=17%  Similarity=0.161  Sum_probs=151.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCe-EEEEEcCCCC--CCCCC---CCCCeEEEEcCCCCh-hhHHHHhc-------CC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHS-VRALVRRTSD--ISGLP---SEGALELVYGDVTDY-RSLVDACF-------GC   66 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~-V~~~~r~~~~--~~~~~---~~~~v~~~~~Dl~d~-~~~~~~~~-------~~   66 (334)
                      +++|||||+|+||.++++.|+++|++ |++++|+...  ...+.   ...++.++.+|++|. +++.++++       ++
T Consensus         6 k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i   85 (254)
T 1sby_A            6 KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTV   85 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSCC
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcCCC
Confidence            36999999999999999999999997 9999998631  11110   012688999999998 77776664       68


Q ss_pred             CEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCC------CcEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           67 HVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKT------VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        67 d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~------~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      |+|||+||...  .++++..+++|+.++.++++++.+...      ..++|++||...+.....              .+
T Consensus        86 d~lv~~Ag~~~--~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~  149 (254)
T 1sby_A           86 DILINGAGILD--DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQ--------------VP  149 (254)
T ss_dssp             CEEEECCCCCC--TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT--------------SH
T ss_pred             CEEEECCccCC--HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCC--------------ch
Confidence            99999999753  356778999999999999999875421      357999999887753321              36


Q ss_pred             hHHHHHHHHHHHHHHHhh----cCCCEEEEecCceecCCCCCchhHH--HHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          141 QYERSKAVADKIALQAAS----EGLPIVPVYPGVIYGPGKLTTGNLV--AKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~~----~g~~~~ilR~~~v~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      .|+.+|.+.+.+.+.+..    +|+++++++||.+.++.........  ...+.....            ...+.+++|+
T Consensus       150 ~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~dv  217 (254)
T 1sby_A          150 VYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLL------------SHPTQTSEQC  217 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHT------------TSCCEEHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHh------------cCCCCCHHHH
Confidence            799999999998887653    5899999999999886311000000  000011111            1123489999


Q ss_pred             HHHHHHHhhcCCCCCeEEecC
Q 019878          215 VDGHIAAMEKGRSGERYLLTG  235 (334)
Q Consensus       215 a~a~~~~~~~~~~g~~~~i~g  235 (334)
                      |++++.++.....|++|++.|
T Consensus       218 A~~i~~~~~~~~~G~~~~v~g  238 (254)
T 1sby_A          218 GQNFVKAIEANKNGAIWKLDL  238 (254)
T ss_dssp             HHHHHHHHHHCCTTCEEEEET
T ss_pred             HHHHHHHHHcCCCCCEEEEeC
Confidence            999999998777899999964

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.90  E-value=3.8e-24  Score=183.30  Aligned_cols=211  Identities=15%  Similarity=0.121  Sum_probs=152.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----C-CCCCeEEEEcCCCChhhHHHHh--------cCCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDAC--------FGCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~-~~~~v~~~~~Dl~d~~~~~~~~--------~~~d~   68 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+++....+    . ...++.++.+|++|.+++.+++        .++|+
T Consensus        11 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~   90 (260)
T 2ae2_A           11 TALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNI   90 (260)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCCE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCCE
Confidence            599999999999999999999999999999986532211    0 0126889999999999888776        46999


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      |||+||....      ..+++...+++|+.++.++++++.+.   .+.+++|++||...+...+              +.
T Consensus        91 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------~~  156 (260)
T 2ae2_A           91 LVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVP--------------YE  156 (260)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCT--------------TC
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCC--------------Cc
Confidence            9999997432      12244568899999999999998532   2467999999987664321              13


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCC--chhHHHHHHHHHHcCCCCccccCCCCceeeeeHHH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLT--TGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                      ..|+.+|.+.+.+.+.+.    ++|+++++++|+.+.++....  ........+......         .....+.+++|
T Consensus       157 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~d  227 (260)
T 2ae2_A          157 AVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDR---------CALRRMGEPKE  227 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHT---------STTCSCBCHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhc---------CCCCCCCCHHH
Confidence            679999999999888765    348999999999998752100  000000111111111         12235889999


Q ss_pred             HHHHHHHHhhcC---CCCCeEEecC
Q 019878          214 VVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       214 ~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +|+++..++...   ..|+++++.|
T Consensus       228 vA~~v~~l~s~~~~~~tG~~~~vdg  252 (260)
T 2ae2_A          228 LAAMVAFLCFPAASYVTGQIIYVDG  252 (260)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHcCccccCCCCCEEEECC
Confidence            999999988653   3689999964

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.90  E-value=2.1e-22  Score=174.13  Aligned_cols=221  Identities=16%  Similarity=0.106  Sum_probs=158.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC---------C--------CCCCCeEEEEcCCCChhhHHHHhc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG---------L--------PSEGALELVYGDVTDYRSLVDACF   64 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------~--------~~~~~v~~~~~Dl~d~~~~~~~~~   64 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+......         +        ....++.++.+|++|.+++.++++
T Consensus        15 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   94 (278)
T 3sx2_A           15 VAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAALQ   94 (278)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence            59999999999999999999999999999987431110         0        001368999999999999888775


Q ss_pred             -------CCCEEEEeccccCC--CCCCcccchhhhhHHHHHHHHHHHhc----CCCcEEEEecccceeccCCCccCCCCC
Q 019878           65 -------GCHVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQ  131 (334)
Q Consensus        65 -------~~d~vih~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~e~~  131 (334)
                             ++|++||+||....  ..+++...+++|+.++.++++++.+.    +...++|++||...+.....       
T Consensus        95 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------  167 (278)
T 3sx2_A           95 AGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGS-------  167 (278)
T ss_dssp             HHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCC-------
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCcc-------
Confidence                   68999999997533  23456678999999999999998654    12468999999876543211       


Q ss_pred             ccccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHH-HcCCCCccccCCCCce
Q 019878          132 VHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIER-FNGRLPGYIGYGNDRF  206 (334)
Q Consensus       132 ~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  206 (334)
                         +.++...|+.+|.+.+.+.+.+.    ++|+++..++|+.|.++....  ......+... .........+.... +
T Consensus       168 ---~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p-~  241 (278)
T 3sx2_A          168 ---ADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINN--EFTREWLAKMAAATDTPGAMGNAMP-V  241 (278)
T ss_dssp             ---SSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSS--HHHHHHHHHHHHHCC--CTTSCSSS-C
T ss_pred             ---CCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchh--hhHHHHHhhccchhhhhhhhhhhcC-c
Confidence               01124679999999888877654    458999999999999986432  1222222211 12222222333333 6


Q ss_pred             eeeeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          207 SFCHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       207 ~~i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      .+++++|+|+++..++...   ..|+++++.|
T Consensus       242 ~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdG  273 (278)
T 3sx2_A          242 EVLAPEDVANAVAWLVSDQARYITGVTLPVDA  273 (278)
T ss_dssp             SSBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             CcCCHHHHHHHHHHHhCcccccccCCEEeECC
Confidence            7899999999999998653   3699999964

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.90  E-value=2.1e-23  Score=177.39  Aligned_cols=209  Identities=16%  Similarity=0.135  Sum_probs=154.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      +++|||||+|+||+++++.|+++|++|++++|+.+....+.     ...++.++.+|++|.+++.++++       ++|+
T Consensus         6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   85 (247)
T 3lyl_A            6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAIDI   85 (247)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCSE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            36999999999999999999999999999999865322110     01368999999999998887764       4799


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      |||+||....      ..+++...+++|+.++.++++++.+.   .+..++|++||...+.+.+.              .
T Consensus        86 li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  151 (247)
T 3lyl_A           86 LVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPG--------------Q  151 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT--------------C
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCC--------------c
Confidence            9999997532      22345568899999999999987653   13469999999877654321              3


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      +.|+.+|.+.+.+.+.+.    .+|+++.+++|+.+.++.......   .. .......        ...+.+.+++|+|
T Consensus       152 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~~-~~~~~~~--------~~~~~~~~~~dva  219 (247)
T 3lyl_A          152 TNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTD---EQ-KSFIATK--------IPSGQIGEPKDIA  219 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCH---HH-HHHHHTT--------STTCCCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccH---HH-HHHHhhc--------CCCCCCcCHHHHH
Confidence            679999998877777654    458999999999999875432221   11 1111121        2234688999999


Q ss_pred             HHHHHHhhcC---CCCCeEEecC
Q 019878          216 DGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       216 ~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +++..++...   ..|+++++.|
T Consensus       220 ~~i~~l~s~~~~~~tG~~i~vdg  242 (247)
T 3lyl_A          220 AAVAFLASEEAKYITGQTLHVNG  242 (247)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHhCCCcCCccCCEEEECC
Confidence            9999998653   2699999964

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.90  E-value=4.6e-24  Score=182.26  Aligned_cols=213  Identities=17%  Similarity=0.165  Sum_probs=155.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+....+.     ...++.++.+|++|.+++.++++       ++|++
T Consensus        14 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~l   93 (256)
T 3gaf_A           14 VAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITVL   93 (256)
T ss_dssp             EEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5999999999999999999999999999999865322110     01368999999999998887775       68999


Q ss_pred             EEeccccCC-----CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccCh
Q 019878           70 FHTAALVEP-----WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (334)
Q Consensus        70 ih~a~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  141 (334)
                      ||+||....     ..++++..+++|+.++.++++++.+.   .+..++|++||...+.....              .+.
T Consensus        94 v~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~  159 (256)
T 3gaf_A           94 VNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVR--------------MAS  159 (256)
T ss_dssp             EECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTT--------------CHH
T ss_pred             EECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCC--------------chH
Confidence            999997432     12345568899999999999998543   24569999999877643321              367


Q ss_pred             HHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHH
Q 019878          142 YERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDG  217 (334)
Q Consensus       142 Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  217 (334)
                      |+.+|.+.+.+.+.+.    ++|+++..++||.+.++..   ................        ....+.+++|+|++
T Consensus       160 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~---~~~~~~~~~~~~~~~~--------p~~r~~~~~dva~~  228 (256)
T 3gaf_A          160 YGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDAL---ATVLTPEIERAMLKHT--------PLGRLGEAQDIANA  228 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHH---HHHCCHHHHHHHHTTC--------TTSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchh---hhccCHHHHHHHHhcC--------CCCCCCCHHHHHHH
Confidence            9999999988887654    4589999999999987631   0110111111111211        22357889999999


Q ss_pred             HHHHhhcC---CCCCeEEec-CCCCC
Q 019878          218 HIAAMEKG---RSGERYLLT-GENAS  239 (334)
Q Consensus       218 ~~~~~~~~---~~g~~~~i~-g~~~s  239 (334)
                      +..++...   ..|+++++. |...+
T Consensus       229 ~~~L~s~~~~~itG~~i~vdgG~~~~  254 (256)
T 3gaf_A          229 ALFLCSPAAAWISGQVLTVSGGGVQE  254 (256)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTSCCC
T ss_pred             HHHHcCCcccCccCCEEEECCCcccc
Confidence            99998753   369999996 44444

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.90  E-value=1.2e-22  Score=176.92  Aligned_cols=218  Identities=15%  Similarity=0.111  Sum_probs=154.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc---CCCEEEEecccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF---GCHVIFHTAALV   76 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~---~~d~vih~a~~~   76 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.++......  ..++.++.+|++|.+++.++++   ++|+|||+||..
T Consensus        18 ~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~nAg~~   97 (291)
T 3rd5_A           18 TVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLINNAGIM   97 (291)
T ss_dssp             EEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEECCCCC
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEECCcCC
Confidence            59999999999999999999999999999998654321110  1368999999999999999887   479999999985


Q ss_pred             CC----CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCc--cCCCCCccccccccChHHHHHHHHH
Q 019878           77 EP----WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGY--IADENQVHEEKYFCTQYERSKAVAD  150 (334)
Q Consensus        77 ~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~--~~~e~~~~~~~~~~~~Y~~sK~~~E  150 (334)
                      ..    ..++++..+++|+.++.++++++.+. ..+|+|++||...+......  ...+..   +..+...|+.||++.+
T Consensus        98 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~-~~~riv~isS~~~~~~~~~~~~~~~~~~---~~~~~~~Y~~sK~a~~  173 (291)
T 3rd5_A           98 AVPYALTVDGFESQIGTNHLGHFALTNLLLPR-LTDRVVTVSSMAHWPGRINLEDLNWRSR---RYSPWLAYSQSKLANL  173 (291)
T ss_dssp             SCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGG-EEEEEEEECCGGGTTCCCCSSCTTCSSS---CCCHHHHHHHHHHHHH
T ss_pred             CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHhheeEeechhhccCCCCccccccccc---CCCCcchHHHHHHHHH
Confidence            42    34567789999999999999999998 46799999998877543211  111111   1223578999999988


Q ss_pred             HHHHHHh----hcC--CCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhc
Q 019878          151 KIALQAA----SEG--LPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEK  224 (334)
Q Consensus       151 ~~~~~~~----~~g--~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~  224 (334)
                      .+.+.+.    .+|  +++..++||.|..+......    ..........+        ..+-...++|+|++++.++..
T Consensus       174 ~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~----~~~~~~~~~~~--------~~~~~~~~~~~A~~~~~l~~~  241 (291)
T 3rd5_A          174 LFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASG----RKLGDALMSAA--------TRVVATDADFGARQTLYAASQ  241 (291)
T ss_dssp             HHHHHHHHHHHHTTCCCEEEEECCSGGGSCC--------------------------------CHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccc----hHHHHHHHHHH--------HHHHhCCHHHHHHHHHHHHcC
Confidence            8887654    346  99999999999876432111    11111111100        111233599999999999887


Q ss_pred             CC-CCCeEEecC
Q 019878          225 GR-SGERYLLTG  235 (334)
Q Consensus       225 ~~-~g~~~~i~g  235 (334)
                      +. .|+++++.|
T Consensus       242 ~~~~G~~~~vdg  253 (291)
T 3rd5_A          242 DLPGDSFVGPRF  253 (291)
T ss_dssp             CCCTTCEEEETT
T ss_pred             CCCCCceeCCcc
Confidence            54 588888853

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.90  E-value=2.6e-22  Score=173.69  Aligned_cols=218  Identities=16%  Similarity=0.072  Sum_probs=153.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC------------------CCCCCeEEEEcCCCChhhHHHHh
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL------------------PSEGALELVYGDVTDYRSLVDAC   63 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------------------~~~~~v~~~~~Dl~d~~~~~~~~   63 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+.....                  ....++.++.+|++|.+++.+++
T Consensus        17 ~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   96 (280)
T 3pgx_A           17 VAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALRELV   96 (280)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHH
Confidence            599999999999999999999999999999853211100                  00136889999999999888776


Q ss_pred             c-------CCCEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc----CCCcEEEEecccceeccCCCcc
Q 019878           64 F-------GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYI  126 (334)
Q Consensus        64 ~-------~~d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~  126 (334)
                      +       ++|++||+||....      ..++++..+++|+.++.++++++...    +...++|++||...+.....  
T Consensus        97 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--  174 (280)
T 3pgx_A           97 ADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPG--  174 (280)
T ss_dssp             HHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTT--
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCCCC--
Confidence            5       68999999997432      22334568899999999999998543    22468999999877643321  


Q ss_pred             CCCCCccccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCC
Q 019878          127 ADENQVHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYG  202 (334)
Q Consensus       127 ~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (334)
                                  .+.|+.+|.+.+.+.+.+.    ++|+++..++||.++++....  ......+...............
T Consensus       175 ------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~  240 (280)
T 3pgx_A          175 ------------NGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEP--EAMMEIFARHPSFVHSFPPMPV  240 (280)
T ss_dssp             ------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCH--HHHHHHHHHCGGGGGGSCCBTT
T ss_pred             ------------chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccch--hhhhhhhhcCchhhhhhhhccc
Confidence                        3679999999988777654    469999999999999986421  1111222111000000001111


Q ss_pred             CCceeeeeHHHHHHHHHHHhhcC---CCCCeEEecCC
Q 019878          203 NDRFSFCHVDDVVDGHIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       203 ~~~~~~i~v~D~a~a~~~~~~~~---~~g~~~~i~g~  236 (334)
                      ... .+.+++|+|+++..++...   -.|+++++.|.
T Consensus       241 ~~~-r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  276 (280)
T 3pgx_A          241 QPN-GFMTADEVADVVAWLAGDGSGTLTGTQIPVDKG  276 (280)
T ss_dssp             BCS-SCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTT
T ss_pred             CCC-CCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            122 3899999999999998653   36999999754

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.90  E-value=2.2e-23  Score=181.25  Aligned_cols=207  Identities=22%  Similarity=0.216  Sum_probs=152.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CCCC--CCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSE--GALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~--~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+....    +...  .++.++.+|++|.+++.++++       ++|+
T Consensus        43 ~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  122 (293)
T 3rih_A           43 SVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDV  122 (293)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            59999999999999999999999999999998764321    1111  368999999999988877664       5799


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHH----hcCCCcEEEEeccccee-ccCCCccCCCCCcccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAK----ETKTVEKIIYTSSFFAL-GSTDGYIADENQVHEEKY  137 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~-~~~~~~~~~e~~~~~~~~  137 (334)
                      |||+||....      ..++++..+++|+.++.++++++.    +. +..++|++||...+ ....              
T Consensus       123 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iV~isS~~~~~~~~~--------------  187 (293)
T 3rih_A          123 VCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTAS-GRGRVILTSSITGPVTGYP--------------  187 (293)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH-SSCEEEEECCSBTTTBBCT--------------
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEeChhhccCCCC--------------
Confidence            9999997432      122345688999999999999984    43 45799999997643 2111              


Q ss_pred             ccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHH
Q 019878          138 FCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                      ..+.|+.+|.+.+.+.+.+.    ++|+++.+++||.++++...   ..............+.         ..+..++|
T Consensus       188 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~---~~~~~~~~~~~~~~p~---------~r~~~p~d  255 (293)
T 3rih_A          188 GWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLV---DMGEEYISGMARSIPM---------GMLGSPVD  255 (293)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHH---HTCHHHHHHHHTTSTT---------SSCBCHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchh---hccHHHHHHHHhcCCC---------CCCCCHHH
Confidence            13679999999888887654    46999999999999987421   1112222222222221         23567999


Q ss_pred             HHHHHHHHhhcC---CCCCeEEecC
Q 019878          214 VVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       214 ~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +++++..++...   -.|+++++.|
T Consensus       256 vA~~v~fL~s~~a~~itG~~i~vdG  280 (293)
T 3rih_A          256 IGHLAAFLATDEAGYITGQAIVVDG  280 (293)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHhCccccCCCCCEEEECC
Confidence            999999998653   3699999964

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.90  E-value=3.6e-24  Score=182.48  Aligned_cols=210  Identities=14%  Similarity=0.123  Sum_probs=150.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CCCCCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      +++|||||+|+||+++++.|+++|++|++++|+++....    +....++.++.+|++|.+++.++++       ++|+|
T Consensus         7 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   86 (251)
T 1zk4_A            7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTL   86 (251)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            369999999999999999999999999999997643211    1111368999999999998887775       48999


Q ss_pred             EEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCC-cEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTV-EKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        70 ih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~-~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      ||+||....      ..+++...+++|+.++.++.+.+.+.   .+. +++|++||...+...+              +.
T Consensus        87 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------------~~  152 (251)
T 1zk4_A           87 VNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDP--------------SL  152 (251)
T ss_dssp             EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCT--------------TC
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCC--------------CC
Confidence            999997432      11234568899999887776665432   144 7999999988775432              13


Q ss_pred             ChHHHHHHHHHHHHHHHh------hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHH
Q 019878          140 TQYERSKAVADKIALQAA------SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~------~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                      +.|+.+|.+.|.+.+.+.      ..|++++++||+.++++.......   ........        .......+++++|
T Consensus       153 ~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~--------~~~~~~~~~~~~d  221 (251)
T 1zk4_A          153 GAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPG---AEEAMSQR--------TKTPMGHIGEPND  221 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTT---HHHHHTST--------TTCTTSSCBCHHH
T ss_pred             ccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCc---hhhhHHHh--------hcCCCCCCcCHHH
Confidence            679999999998887653      458999999999999873211100   01111010        1112235889999


Q ss_pred             HHHHHHHHhhcC---CCCCeEEecC
Q 019878          214 VVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       214 ~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +|+++..++...   ..|+++++.|
T Consensus       222 va~~~~~l~~~~~~~~~G~~~~v~g  246 (251)
T 1zk4_A          222 IAYICVYLASNESKFATGSEFVVDG  246 (251)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHcCcccccccCcEEEECC
Confidence            999999998754   3588999965

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.90  E-value=8.8e-23  Score=175.17  Aligned_cols=207  Identities=20%  Similarity=0.165  Sum_probs=150.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~a~   74 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+......      ...+.+|++|.+.+.++++       ++|+|||+||
T Consensus        30 ~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~------~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnAg  103 (266)
T 3uxy_A           30 VALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA------DLHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAG  103 (266)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC------SEECCCCTTSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh------hhccCcCCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence            59999999999999999999999999999998765432      2445899999988776654       6899999999


Q ss_pred             ccCC------CCCCcccchhhhhHHHHHHHHHHH----hcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHH
Q 019878           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAK----ETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (334)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (334)
                      ....      ..++++..+++|+.++.++++++.    +. +..++|++||...+....              ..+.|+.
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~~~--------------~~~~Y~a  168 (266)
T 3uxy_A          104 VISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAA-GGGAIVNVASCWGLRPGP--------------GHALYCL  168 (266)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCSBTTBCCT--------------TBHHHHH
T ss_pred             CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECCHHhCCCCC--------------CChHHHH
Confidence            7432      223455678899999999999983    43 457999999987664322              1367999


Q ss_pred             HHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCch---h-HHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHH
Q 019878          145 SKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTG---N-LVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVD  216 (334)
Q Consensus       145 sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  216 (334)
                      +|.+.+.+.+.+.    ++|+++.+++||.+.++......   . .........         ........+.+++|+|+
T Consensus       169 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~---------~~~~p~~r~~~pedvA~  239 (266)
T 3uxy_A          169 TKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAEL---------GRTVPLGRIAEPEDIAD  239 (266)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHH---------HTTSTTSSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHH---------HhcCCCCCCcCHHHHHH
Confidence            9999998887654    45899999999999876310000   0 000011111         11223346789999999


Q ss_pred             HHHHHhhcC---CCCCeEEec-CCCC
Q 019878          217 GHIAAMEKG---RSGERYLLT-GENA  238 (334)
Q Consensus       217 a~~~~~~~~---~~g~~~~i~-g~~~  238 (334)
                      ++..++...   ..|+++++. |..+
T Consensus       240 ~v~~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 3uxy_A          240 VVLFLASDAARYLCGSLVEVNGGKAV  265 (266)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHHhCchhcCCcCCEEEECcCEeC
Confidence            999998764   369999996 4443

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.90  E-value=1.5e-22  Score=172.90  Aligned_cols=215  Identities=13%  Similarity=0.164  Sum_probs=152.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC--CCCCC-CCCeEEEEcCCCChhhHHHHhc-------CCCEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI--SGLPS-EGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vi   70 (334)
                      +++|||||+|+||.++++.|+++|++|++++|+.+..  ..+.. ..++.++.+|++|.+++.++++       ++|+||
T Consensus         5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv   84 (255)
T 2q2v_A            5 KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDILV   84 (255)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            3699999999999999999999999999999986510  00111 1258889999999999888876       799999


Q ss_pred             EeccccCC------CCCCcccchhhhhHHHHHHHHHH----HhcCCCcEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAA----KETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        71 h~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      |+||....      ..++++..+++|+.++.++++++    ++. +.+++|++||...+.....              ..
T Consensus        85 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~--------------~~  149 (255)
T 2q2v_A           85 NNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRAR-NWGRIINIASVHGLVGSTG--------------KA  149 (255)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCGGGTSCCTT--------------BH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEcCchhccCCCC--------------ch
Confidence            99997432      12234568899999877776665    444 4679999999877653221              36


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCC----ccc-cCCCCceeeeeH
Q 019878          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLP----GYI-GYGNDRFSFCHV  211 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~i~v  211 (334)
                      .|+.+|.+.+.+.+.+.    ++|++++++||+.++++..   ...... ....  +...    ..+ ........++++
T Consensus       150 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~---~~~~~~-~~~~--~~~~~~~~~~~~~~~~p~~~~~~~  223 (255)
T 2q2v_A          150 AYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLV---QKQIDD-RAAN--GGDPLQAQHDLLAEKQPSLAFVTP  223 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHH---HHHHHH-HHHH--TCCHHHHHHHHHTTTCTTCCCBCH
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcch---hhhccc-cccc--ccchHHHHHHHHhccCCCCCCcCH
Confidence            79999999998888765    3489999999999988631   111100 0000  0000    000 112233468999


Q ss_pred             HHHHHHHHHHhhcC---CCCCeEEecCC
Q 019878          212 DDVVDGHIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       212 ~D~a~a~~~~~~~~---~~g~~~~i~g~  236 (334)
                      +|+|+++..++..+   ..|++|++.|.
T Consensus       224 ~dvA~~~~~l~s~~~~~~tG~~~~vdgG  251 (255)
T 2q2v_A          224 EHLGELVLFLCSEAGSQVRGAAWNVDGG  251 (255)
T ss_dssp             HHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHhCCccCCCCCCEEEECCC
Confidence            99999999988653   35899999653

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.90  E-value=4.9e-24  Score=184.22  Aligned_cols=209  Identities=14%  Similarity=0.096  Sum_probs=152.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----C-CCCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+++....+    . ...++.++.+|++|.+++.++++       ++|+|
T Consensus        24 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l  103 (277)
T 2rhc_B           24 VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVL  103 (277)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            599999999999999999999999999999986432211    0 01268899999999998887765       58999


Q ss_pred             EEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc-----CCCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET-----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        70 ih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      ||+||....      ..+++...+++|+.++.++++++.+.     .+.+++|++||...+....              +
T Consensus       104 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~--------------~  169 (277)
T 2rhc_B          104 VNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVV--------------H  169 (277)
T ss_dssp             EECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCT--------------T
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCC--------------C
Confidence            999997432      11234568899999999999998764     1357999999986653221              1


Q ss_pred             cChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHH-----------HHHHHHHcCCCCccccCCC
Q 019878          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVA-----------KLMIERFNGRLPGYIGYGN  203 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~  203 (334)
                      ...|+.+|.+.+.+.+.+.    ++|++++++||+.++++..   .....           ........         ..
T Consensus       170 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~---~~~~~~~~~~~~~~~~~~~~~~~~---------~~  237 (277)
T 2rhc_B          170 AAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMA---ASVREHYSDIWEVSTEEAFDRITA---------RV  237 (277)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHH---HHHHHHHHHHHTCCHHHHHHHHHH---------HS
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchh---hhhhhhcccccccchHHHHHHHHh---------cC
Confidence            3679999999998887754    3589999999999987631   11110           01111111         11


Q ss_pred             CceeeeeHHHHHHHHHHHhhcC---CCCCeEEecCC
Q 019878          204 DRFSFCHVDDVVDGHIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       204 ~~~~~i~v~D~a~a~~~~~~~~---~~g~~~~i~g~  236 (334)
                      ....+++++|+|+++..++..+   ..|+++++.|.
T Consensus       238 p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG  273 (277)
T 2rhc_B          238 PIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG  273 (277)
T ss_dssp             TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCC
Confidence            2235889999999999998754   36899999653

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.90  E-value=1.2e-23  Score=179.86  Aligned_cols=214  Identities=14%  Similarity=0.120  Sum_probs=153.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CC-CCCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+....    +. ...++.++.+|++|.+++.++++       ++|++
T Consensus         8 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   87 (257)
T 3imf_A            8 VVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRIDIL   87 (257)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            59999999999999999999999999999998653221    11 11368999999999998887775       58999


Q ss_pred             EEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc----CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        70 ih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      ||+||....      ..++++..+++|+.++.++++++.+.    +...++|++||...+.....              .
T Consensus        88 v~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  153 (257)
T 3imf_A           88 INNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPG--------------V  153 (257)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTT--------------C
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCC--------------c
Confidence            999996322      22345668899999999999998432    23569999999876643321              3


Q ss_pred             ChHHHHHHHHHHHHHHHh-----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          140 TQYERSKAVADKIALQAA-----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~-----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      ..|+.+|.+.+.+.+.+.     ++|+++..++||.+.++...........+..... ..        .....+..++|+
T Consensus       154 ~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~-~~--------~p~~r~~~pedv  224 (257)
T 3imf_A          154 IHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTI-QS--------VPLGRLGTPEEI  224 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHH-TT--------STTCSCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHH-hc--------CCCCCCcCHHHH
Confidence            679999998888776643     4599999999999998753211000000111111 11        122347889999


Q ss_pred             HHHHHHHhhcC---CCCCeEEec-CCCC
Q 019878          215 VDGHIAAMEKG---RSGERYLLT-GENA  238 (334)
Q Consensus       215 a~a~~~~~~~~---~~g~~~~i~-g~~~  238 (334)
                      |+++..++...   ..|+++++. |..+
T Consensus       225 A~~v~~L~s~~~~~itG~~i~vdGG~~~  252 (257)
T 3imf_A          225 AGLAYYLCSDEAAYINGTCMTMDGGQHL  252 (257)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTTTS
T ss_pred             HHHHHHHcCchhcCccCCEEEECCCccc
Confidence            99999998754   369999996 4443

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.90  E-value=3.7e-23  Score=177.85  Aligned_cols=208  Identities=18%  Similarity=0.130  Sum_probs=152.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~a   73 (334)
                      ++||||||+|+||.++++.|+++|++|++++|+......     .+.++.+|++|.+++.++++       ++|+|||+|
T Consensus        15 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nA   89 (269)
T 3vtz_A           15 KVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVN-----VSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNA   89 (269)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CTT-----SSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhccC-----ceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            369999999999999999999999999999998765422     57889999999998887775       689999999


Q ss_pred             cccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChHHH
Q 019878           74 ALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (334)
Q Consensus        74 ~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (334)
                      |....      ..+++...+++|+.++.++++++...   .+..++|++||...+.....              ...|+.
T Consensus        90 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~a  155 (269)
T 3vtz_A           90 GIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKN--------------AAAYVT  155 (269)
T ss_dssp             CCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTT--------------CHHHHH
T ss_pred             CcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCC--------------ChhHHH
Confidence            97432      11234567889999999999987653   14569999999888764332              367999


Q ss_pred             HHHHHHHHHHHHhh-c--CCCEEEEecCceecCCCCCc--------hhHHHHHHHHHHcCCCCccccCCCCceeeeeHHH
Q 019878          145 SKAVADKIALQAAS-E--GLPIVPVYPGVIYGPGKLTT--------GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       145 sK~~~E~~~~~~~~-~--g~~~~ilR~~~v~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                      +|.+.+.+.+.+.. .  ++++..++||.+.++.....        .............         ......+.+++|
T Consensus       156 sKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~r~~~ped  226 (269)
T 3vtz_A          156 SKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGR---------QHPMGRIGRPEE  226 (269)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHH---------HSTTSSCBCHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHh---------cCCCCCCcCHHH
Confidence            99999998887653 2  89999999999987631000        0000111111111         112335778999


Q ss_pred             HHHHHHHHhhcC---CCCCeEEecCC
Q 019878          214 VVDGHIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       214 ~a~a~~~~~~~~---~~g~~~~i~g~  236 (334)
                      +|+++..++...   ..|+++++.|.
T Consensus       227 vA~~v~~L~s~~~~~itG~~i~vdGG  252 (269)
T 3vtz_A          227 VAEVVAFLASDRSSFITGACLTVDGG  252 (269)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHhCCccCCCcCcEEEECCC
Confidence            999999998754   36999999653

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.90  E-value=1.6e-23  Score=179.52  Aligned_cols=208  Identities=22%  Similarity=0.256  Sum_probs=152.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CCC--CCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPS--EGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.++...    +..  ..++.++.+|++|.+++.++++       ++|+
T Consensus        12 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   91 (262)
T 3pk0_A           12 SVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGIDV   91 (262)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSCCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            59999999999999999999999999999998653221    111  1268999999999998887765       6999


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEeccccee-ccCCCccCCCCCccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFAL-GSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~-~~~~~~~~~e~~~~~~~~~  138 (334)
                      +||+||....      ..++++..+++|+.++.++++++.+.   .+..++|++||.... ...+              .
T Consensus        92 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------------~  157 (262)
T 3pk0_A           92 VCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYP--------------G  157 (262)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCT--------------T
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCC--------------C
Confidence            9999997432      12234567899999999999988775   145799999997643 2111              1


Q ss_pred             cChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      ...|+.+|.+.+.+.+.+.    ++|+++..++||.++++......   ........... +        ...+..++|+
T Consensus       158 ~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~---~~~~~~~~~~~-p--------~~r~~~p~dv  225 (262)
T 3pk0_A          158 WSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENG---EEYIASMARSI-P--------AGALGTPEDI  225 (262)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTC---HHHHHHHHTTS-T--------TSSCBCHHHH
T ss_pred             ChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccC---HHHHHHHHhcC-C--------CCCCcCHHHH
Confidence            3679999999998887754    35999999999999987421111   12222222221 1        1236789999


Q ss_pred             HHHHHHHhhcC---CCCCeEEecC
Q 019878          215 VDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       215 a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      |+++..++...   ..|+++++.|
T Consensus       226 a~~v~~L~s~~~~~itG~~i~vdG  249 (262)
T 3pk0_A          226 GHLAAFLATKEAGYITGQAIAVDG  249 (262)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHhCccccCCcCCEEEECC
Confidence            99999998654   3699999964

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.90  E-value=1.7e-23  Score=181.63  Aligned_cols=208  Identities=17%  Similarity=0.201  Sum_probs=149.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CCC-CCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPS-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      +||||||+|+||+++++.|+++|++|++++|++++...    +.. ..++.++.+|++|.+++.++++       ++|+|
T Consensus        46 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~id~l  125 (285)
T 2c07_A           46 VALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDIL  125 (285)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            59999999999999999999999999998887543211    100 1268899999999999888763       58999


Q ss_pred             EEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        70 ih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      ||+||....      ..+++...+++|+.++.++++++.+.   .+.+++|++||...+.....              ..
T Consensus       126 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~~  191 (285)
T 2c07_A          126 VNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVG--------------QA  191 (285)
T ss_dssp             EECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT--------------CH
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCC--------------Cc
Confidence            999997432      12234568899999988888877632   14679999999876543221              36


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHH
Q 019878          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVD  216 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  216 (334)
                      .|+.+|.+.+.+.+.+.    +.|++++++||+.+.++......   ........ ...+        ...+++++|+|+
T Consensus       192 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~-~~~~--------~~~~~~~~dvA~  259 (285)
T 2c07_A          192 NYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKIS---EQIKKNII-SNIP--------AGRMGTPEEVAN  259 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CC---HHHHHHHH-TTCT--------TSSCBCHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcC---HHHHHHHH-hhCC--------CCCCCCHHHHHH
Confidence            79999999888877754    35899999999999987532111   11111211 1111        124889999999


Q ss_pred             HHHHHhhcC---CCCCeEEecC
Q 019878          217 GHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       217 a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +++.++..+   ..|+++++.|
T Consensus       260 ~~~~l~~~~~~~~~G~~i~v~g  281 (285)
T 2c07_A          260 LACFLSSDKSGYINGRVFVIDG  281 (285)
T ss_dssp             HHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHhCCCcCCCCCCEEEeCC
Confidence            999998753   3688999964

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.90  E-value=5.7e-23  Score=175.76  Aligned_cols=208  Identities=16%  Similarity=0.134  Sum_probs=149.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC-CCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEEEec
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-LPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~a   73 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.++... +.. .++.++.+|++|.+++.++++       ++|+|||+|
T Consensus        29 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nA  107 (260)
T 3gem_A           29 PILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQ-AGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNA  107 (260)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHH-HTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEECC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHh-cCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            59999999999999999999999999999998754211 111 247899999999998887775       589999999


Q ss_pred             cccCCCC-----CCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChHHHH
Q 019878           74 ALVEPWL-----PDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (334)
Q Consensus        74 ~~~~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (334)
                      |......     +++...+++|+.++.++++++...   .+..++|++||...+.+...              ...|+.+
T Consensus       108 g~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~as  173 (260)
T 3gem_A          108 SEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSK--------------HIAYCAT  173 (260)
T ss_dssp             CCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSS--------------CHHHHHH
T ss_pred             CccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCC--------------cHhHHHH
Confidence            9743211     223468899999999999988653   24569999999877654321              3679999


Q ss_pred             HHHHHHHHHHHhh---cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHh
Q 019878          146 KAVADKIALQAAS---EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAM  222 (334)
Q Consensus       146 K~~~E~~~~~~~~---~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~  222 (334)
                      |.+.+.+.+.+..   .++++..++||.+.++....     ...........         ....+..++|+|++++.++
T Consensus       174 Kaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~-----~~~~~~~~~~~---------p~~r~~~~edva~~v~~L~  239 (260)
T 3gem_A          174 KAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDD-----AAYRANALAKS---------ALGIEPGAEVIYQSLRYLL  239 (260)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEEEEEEECTTCC--------------------C---------CSCCCCCTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCC-----HHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHh
Confidence            9999988887653   26999999999998764211     11111111111         1123556899999999998


Q ss_pred             hcCC-CCCeEEec-CCCC
Q 019878          223 EKGR-SGERYLLT-GENA  238 (334)
Q Consensus       223 ~~~~-~g~~~~i~-g~~~  238 (334)
                      +... .|+++++. |..+
T Consensus       240 ~~~~itG~~i~vdGG~~~  257 (260)
T 3gem_A          240 DSTYVTGTTLTVNGGRHV  257 (260)
T ss_dssp             HCSSCCSCEEEESTTTTT
T ss_pred             hCCCCCCCEEEECCCccc
Confidence            7554 69999996 4444

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.90  E-value=1.4e-23  Score=179.03  Aligned_cols=213  Identities=18%  Similarity=0.131  Sum_probs=149.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCEEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih   71 (334)
                      +++|||||+|+||+++++.|+++|++|++++|+.++...+..  ..++.++.+|++|.+++.++++       ++|+|||
T Consensus         7 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~   86 (253)
T 1hxh_A            7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVN   86 (253)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            469999999999999999999999999999997643221100  1268899999999998877765       4799999


Q ss_pred             eccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChH
Q 019878           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (334)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y  142 (334)
                      +||....      ..+++...+++|+.++..+.+++.+.   .+ +++|++||...+.+..              +...|
T Consensus        87 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~--------------~~~~Y  151 (253)
T 1hxh_A           87 NAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIE--------------QYAGY  151 (253)
T ss_dssp             CCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCT--------------TBHHH
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCC--------------CCccH
Confidence            9997432      11234567899999887777665432   14 7999999988775322              13679


Q ss_pred             HHHHHHHHHHHHHHh----hc--CCCEEEEecCceecCCCCCchhHHH-HHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          143 ERSKAVADKIALQAA----SE--GLPIVPVYPGVIYGPGKLTTGNLVA-KLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       143 ~~sK~~~E~~~~~~~----~~--g~~~~ilR~~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      +.+|.+.+.+.+.+.    ++  |++++++||+.++++...   .... ............     ......+.+++|+|
T Consensus       152 ~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~---~~~~~~~~~~~~~~~~~-----~~p~~~~~~~~dvA  223 (253)
T 1hxh_A          152 SASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQ---ASLPKGVSKEMVLHDPK-----LNRAGRAYMPERIA  223 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHH---HHSCTTCCHHHHBCBTT-----TBTTCCEECHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhh---hccchhhhHHHHhhhhc-----cCccCCCCCHHHHH
Confidence            999999998887754    34  899999999999986310   0000 000000111000     11223588999999


Q ss_pred             HHHHHHhhcC---CCCCeEEecCC
Q 019878          216 DGHIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       216 ~a~~~~~~~~---~~g~~~~i~g~  236 (334)
                      +++..++..+   ..|+++++.|.
T Consensus       224 ~~~~~l~s~~~~~~tG~~~~vdgG  247 (253)
T 1hxh_A          224 QLVLFLASDESSVMSGSELHADNS  247 (253)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             HHHHHHcCccccCCCCcEEEECCC
Confidence            9999998754   36889999653

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.90  E-value=2.2e-23  Score=176.90  Aligned_cols=200  Identities=15%  Similarity=0.128  Sum_probs=150.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC-------eEEEEEcCCCCCCCCC-----CCCCeEEEEcCCCChhhHHHHhc----
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH-------SVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF----   64 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~----   64 (334)
                      ++||||||+|+||+++++.|+++|+       +|++++|+.+....+.     ...++.++.+|++|.+++.++++    
T Consensus         3 k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (244)
T 2bd0_A            3 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   82 (244)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHHH
Confidence            3699999999999999999999999       9999999764322110     01268899999999998887775    


Q ss_pred             ---CCCEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCc
Q 019878           65 ---GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQV  132 (334)
Q Consensus        65 ---~~d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~  132 (334)
                         ++|+|||+||....      ..+++...+++|+.++.++++++.+.   .+.+++|++||...+.+..         
T Consensus        83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------  153 (244)
T 2bd0_A           83 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFR---------  153 (244)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT---------
T ss_pred             hCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCC---------
Confidence               59999999997432      12245568899999999999998542   1467999999988775322         


Q ss_pred             cccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceee
Q 019878          133 HEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSF  208 (334)
Q Consensus       133 ~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (334)
                           +.+.|+.+|.+.+.+.+.+.    ++|++++++||+.++++......             ..        ....+
T Consensus       154 -----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-------------~~--------~~~~~  207 (244)
T 2bd0_A          154 -----HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVD-------------DE--------MQALM  207 (244)
T ss_dssp             -----TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCC-------------ST--------TGGGS
T ss_pred             -----CCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhcc-------------cc--------ccccC
Confidence                 13679999999998886653    45899999999999998532110             00        01358


Q ss_pred             eeHHHHHHHHHHHhhcCC---CCCeEEecC
Q 019878          209 CHVDDVVDGHIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       209 i~v~D~a~a~~~~~~~~~---~g~~~~i~g  235 (334)
                      ++++|+|++++.++..+.   .|+++...+
T Consensus       208 ~~~~dva~~~~~l~~~~~~~~~g~~~~~~~  237 (244)
T 2bd0_A          208 MMPEDIAAPVVQAYLQPSRTVVEEIILRPT  237 (244)
T ss_dssp             BCHHHHHHHHHHHHTSCTTEEEEEEEEEET
T ss_pred             CCHHHHHHHHHHHHhCCccccchheEEecc
Confidence            899999999999998654   355555543

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.90  E-value=3.7e-22  Score=173.46  Aligned_cols=229  Identities=14%  Similarity=0.077  Sum_probs=158.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC-----------------CCCCCeEEEEcCCCChhhHHHHhc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-----------------PSEGALELVYGDVTDYRSLVDACF   64 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----------------~~~~~v~~~~~Dl~d~~~~~~~~~   64 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+......-                 ....++.++.+|++|.+++.++++
T Consensus        12 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   91 (287)
T 3pxx_A           12 VVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRELA   91 (287)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHH
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence            599999999999999999999999999999974321100                 001368899999999998887775


Q ss_pred             -------CCCEEEEeccccCC----CCCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCc
Q 019878           65 -------GCHVIFHTAALVEP----WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQV  132 (334)
Q Consensus        65 -------~~d~vih~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~  132 (334)
                             ++|+|||+||....    ..++++..+++|+.++.++++++.... ...++|++||...+......+..+...
T Consensus        92 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~  171 (287)
T 3pxx_A           92 NAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGGPQ  171 (287)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC-----C
T ss_pred             HHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccccccccC
Confidence                   68999999998543    233456789999999999999998863 235899999988775443222222222


Q ss_pred             cccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCC-----CccccCCC
Q 019878          133 HEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRL-----PGYIGYGN  203 (334)
Q Consensus       133 ~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~  203 (334)
                      .   ++...|+.+|.+.+.+.+.+.    ++|+++..++||.+.++..... . ....+........     ........
T Consensus       172 ~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (287)
T 3pxx_A          172 G---PGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSA-P-MYRQFRPDLEAPSRADALLAFPAMQA  246 (287)
T ss_dssp             H---HHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSH-H-HHHHHCTTSSSCCHHHHHHHGGGGCS
T ss_pred             C---CccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccc-c-hhhhhccccccchhHHHHhhhhhhcc
Confidence            2   224789999999988887754    3499999999999998854321 1 0010000000000     00001111


Q ss_pred             CceeeeeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          204 DRFSFCHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       204 ~~~~~i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      ....+.+++|+|+++..++...   -.|+++++.|
T Consensus       247 ~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdG  281 (287)
T 3pxx_A          247 MPTPYVEASDISNAVCFLASDESRYVTGLQFKVDA  281 (287)
T ss_dssp             SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cCCCCCCHHHHHhhHheecchhhcCCCCceEeECc
Confidence            2256899999999999998643   3699999964

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.90  E-value=7.1e-23  Score=175.73  Aligned_cols=205  Identities=20%  Similarity=0.174  Sum_probs=149.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~a~   74 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+....+.. .++.++.+|++|.+++.++++       ++|+|||+||
T Consensus        18 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg   96 (266)
T 3p19_A           18 LVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNL-PNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAG   96 (266)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCC-TTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhc-CCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCC
Confidence            59999999999999999999999999999998765444333 278999999999998887775       6899999999


Q ss_pred             ccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChHHHH
Q 019878           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (334)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (334)
                      ....      ..++++..+++|+.++.++++++.+.   .+..++|++||...+.....              ...|+.+
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~--------------~~~Y~as  162 (266)
T 3p19_A           97 MMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPD--------------HAAYCGT  162 (266)
T ss_dssp             CCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT--------------CHHHHHH
T ss_pred             cCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCC--------------CchHHHH
Confidence            7432      11234567899999999988877532   14579999999877643321              3679999


Q ss_pred             HHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCch-hHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHH
Q 019878          146 KAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTG-NLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIA  220 (334)
Q Consensus       146 K~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~  220 (334)
                      |.+.+.+.+.+.    ++|+++..++||.+.++...... ......+....   .        ....+++++|+|++++.
T Consensus       163 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~---~--------~~~r~~~pedvA~av~~  231 (266)
T 3p19_A          163 KFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWR---V--------DMGGVLAADDVARAVLF  231 (266)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHH---H--------HTTCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhc---c--------cccCCCCHHHHHHHHHH
Confidence            999888777654    46999999999999987432111 11111111100   0        11247889999999999


Q ss_pred             HhhcCCCCCeEE
Q 019878          221 AMEKGRSGERYL  232 (334)
Q Consensus       221 ~~~~~~~g~~~~  232 (334)
                      ++..+....+.+
T Consensus       232 l~~~~~~~~~~~  243 (266)
T 3p19_A          232 AYQQPQNVCIRE  243 (266)
T ss_dssp             HHHSCTTEEEEE
T ss_pred             HHcCCCCcccee
Confidence            999876543433

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.90  E-value=4.8e-23  Score=176.42  Aligned_cols=218  Identities=13%  Similarity=0.119  Sum_probs=150.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC-CCCCC----C--CCCeEEEEcCCCChhhHHHHhc-------CC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISGLP----S--EGALELVYGDVTDYRSLVDACF-------GC   66 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~----~--~~~v~~~~~Dl~d~~~~~~~~~-------~~   66 (334)
                      +++|||||+|+||+++++.|+++|++|++++|+.+. ...+.    .  ..++.++.+|++|.+++.++++       ++
T Consensus         5 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   84 (260)
T 1x1t_A            5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRI   84 (260)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            369999999999999999999999999999998654 22110    0  1268899999999998887775       59


Q ss_pred             CEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccc
Q 019878           67 HVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        67 d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~  137 (334)
                      |+|||+||....      ..++++..+++|+.++.++++++.+.   .+.+++|++||...+....              
T Consensus        85 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------  150 (260)
T 1x1t_A           85 DILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASA--------------  150 (260)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT--------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCC--------------
Confidence            999999997432      12234568899999999999988643   1457999999987764322              


Q ss_pred             ccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHH-Hc-CCCCccc-cCCCCceeeee
Q 019878          138 FCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIER-FN-GRLPGYI-GYGNDRFSFCH  210 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~-~~-~~~~~~~-~~~~~~~~~i~  210 (334)
                      +...|+.+|.+.+.+.+.+.    ++|+++.+++|+.+.++.....   ........ .. ......+ ........+.+
T Consensus       151 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  227 (260)
T 1x1t_A          151 NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQ---ISALAEKNGVDQETAARELLSEKQPSLQFVT  227 (260)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC---------------------------CHHHHCTTCCCBC
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHh---hhhhccccCCchHHHHHHHhhccCCCCCCcC
Confidence            13679999999998887654    3589999999999998753211   00000000 00 0000000 00012235889


Q ss_pred             HHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          211 VDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       211 v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      ++|+|+++..++...   ..|+++++.|
T Consensus       228 p~dva~~~~~l~s~~~~~~tG~~~~vdg  255 (260)
T 1x1t_A          228 PEQLGGTAVFLASDAAAQITGTTVSVDG  255 (260)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHHhChhhcCCCCCEEEECC
Confidence            999999999998753   3688999965

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.90  E-value=5.4e-23  Score=178.86  Aligned_cols=209  Identities=16%  Similarity=0.199  Sum_probs=154.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC-----C-CCCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-----L-PSEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~-~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+......     + ....++.++.+|++|.+++.++++       ++|+
T Consensus        49 ~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  128 (291)
T 3ijr_A           49 NVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNI  128 (291)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSSCCE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            59999999999999999999999999999998642100     0 011368999999999998887765       5899


Q ss_pred             EEEeccccCC-------CCCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           69 IFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        69 vih~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      +||+||....       ..++++..+++|+.++.++++++.+.. ...++|++||...+.....              ..
T Consensus       129 lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~  194 (291)
T 3ijr_A          129 LVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNET--------------LI  194 (291)
T ss_dssp             EEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTT--------------CH
T ss_pred             EEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCC--------------Ch
Confidence            9999997432       223456789999999999999998762 2348999999888754332              26


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHH
Q 019878          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVD  216 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  216 (334)
                      .|+.+|.+.+.+.+.+.    ++|+++..++||.|+++...   ..........        +........+.+++|+|+
T Consensus       195 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~---~~~~~~~~~~--------~~~~~p~~r~~~p~dvA~  263 (291)
T 3ijr_A          195 DYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIP---SSFDEKKVSQ--------FGSNVPMQRPGQPYELAP  263 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHH---HHSCHHHHHH--------TTTTSTTSSCBCGGGTHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCccc---ccCCHHHHHH--------HHccCCCCCCcCHHHHHH
Confidence            69999999998887654    45899999999999987310   0000001111        112223345788999999


Q ss_pred             HHHHHhhcC---CCCCeEEecC
Q 019878          217 GHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       217 a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +++.++...   ..|+++++.|
T Consensus       264 ~v~~L~s~~~~~itG~~i~vdG  285 (291)
T 3ijr_A          264 AYVYLASSDSSYVTGQMIHVNG  285 (291)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESS
T ss_pred             HHHHHhCCccCCCcCCEEEECC
Confidence            999998654   3699999964

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.89  E-value=6e-24  Score=181.34  Aligned_cols=205  Identities=20%  Similarity=0.194  Sum_probs=128.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+....+.     ....+.++.+|++|.+++.++++       ++|+|
T Consensus        11 ~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   90 (253)
T 3qiv_A           11 VGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGIDYL   90 (253)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5999999999999999999999999999999865432110     01368899999999998888775       68999


Q ss_pred             EEeccccCC---------CCCCcccchhhhhHHHHHHHHHHH----hcCCCcEEEEecccceeccCCCccCCCCCccccc
Q 019878           70 FHTAALVEP---------WLPDPSRFFAVNVEGLKNVVQAAK----ETKTVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (334)
Q Consensus        70 ih~a~~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~  136 (334)
                      ||+||....         ..+++...+++|+.++.++++++.    +. +..++|++||...|..               
T Consensus        91 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~---------------  154 (253)
T 3qiv_A           91 VNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKR-GGGAIVNQSSTAAWLY---------------  154 (253)
T ss_dssp             EECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEEECC---------------------
T ss_pred             EECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCCEEEEECCccccCC---------------
Confidence            999997311         122345688999999666666654    43 4579999999887721               


Q ss_pred             cccChHHHHHHHHHHHHHHHhh----cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHH
Q 019878          137 YFCTQYERSKAVADKIALQAAS----EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVD  212 (334)
Q Consensus       137 ~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  212 (334)
                        .+.|+.+|.+.+.+.+.+..    +|+++..++|+.++++......  ..........+         .....+..++
T Consensus       155 --~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~---------~~~~~~~~~~  221 (253)
T 3qiv_A          155 --SNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTT--PKEMVDDIVKG---------LPLSRMGTPD  221 (253)
T ss_dssp             -------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC------------------------------------------CC
T ss_pred             --CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcC--cHHHHHHHhcc---------CCCCCCCCHH
Confidence              25699999999988887653    4899999999999987532110  01111111111         1223466799


Q ss_pred             HHHHHHHHHhhcCC---CCCeEEecC
Q 019878          213 DVVDGHIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       213 D~a~a~~~~~~~~~---~g~~~~i~g  235 (334)
                      |+++++..++....   .|++|++.|
T Consensus       222 dva~~~~~l~s~~~~~~tG~~~~vdg  247 (253)
T 3qiv_A          222 DLVGMCLFLLSDEASWITGQIFNVDG  247 (253)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEC--
T ss_pred             HHHHHHHHHcCccccCCCCCEEEECC
Confidence            99999999987542   699999964

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.89  E-value=2e-23  Score=178.80  Aligned_cols=212  Identities=13%  Similarity=0.126  Sum_probs=149.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-------CCCeEEEEcCCCChhhHHHHhc------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-------EGALELVYGDVTDYRSLVDACF------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-------~~~v~~~~~Dl~d~~~~~~~~~------~~d~   68 (334)
                      ++|||||+|+||+++++.|+++|++|++++|++++...+..       ..++.++.+|++|.+++.++++      ++|+
T Consensus         9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~gid~   88 (260)
T 2z1n_A            9 LAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGGADI   88 (260)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCSE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcCCCE
Confidence            59999999999999999999999999999998643221100       1168899999999999888876      5999


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      |||+||....      ..+++...+++|+.++.++++++.+.   .+.+++|++||...+.....              .
T Consensus        89 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  154 (260)
T 2z1n_A           89 LVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQD--------------L  154 (260)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT--------------B
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCC--------------C
Confidence            9999996432      12245568899999997777766532   14679999999887754221              3


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCch-------hHHHHHHHHHHcCCCCccccCCCCceee
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTG-------NLVAKLMIERFNGRLPGYIGYGNDRFSF  208 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (334)
                      ..|+.+|.+.+.+.+.+.    ++|++++++||+.++++......       ............        .......+
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~p~~r~  226 (260)
T 2z1n_A          155 ALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMA--------SRIPMGRV  226 (260)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-------------------------------CCTTSSC
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHH--------hcCCCCCc
Confidence            679999999888877654    45899999999999998532100       000000000000        01112347


Q ss_pred             eeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          209 CHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       209 i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      .+++|+|+++..++...   ..|+++++.|
T Consensus       227 ~~~~dva~~v~~l~s~~~~~~tG~~i~vdG  256 (260)
T 2z1n_A          227 GKPEELASVVAFLASEKASFITGAVIPVDG  256 (260)
T ss_dssp             CCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             cCHHHHHHHHHHHhCccccCCCCCEEEeCC
Confidence            89999999999998753   3688999965

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.89  E-value=4.7e-23  Score=176.17  Aligned_cols=218  Identities=14%  Similarity=0.070  Sum_probs=146.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcC----CCEEEEecccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG----CHVIFHTAALV   76 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~----~d~vih~a~~~   76 (334)
                      ++||||||+|+||+++++.|+++|++|++++|+.++...       . +.+|++|.+++.+++++    +|+|||+||..
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------~-~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~   73 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-------D-LSTAEGRKQAIADVLAKCSKGMDGLVLCAGLG   73 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------C-TTSHHHHHHHHHHHHTTCTTCCSEEEECCCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-------c-cccCCCCHHHHHHHHHHhCCCCCEEEECCCCC
Confidence            149999999999999999999999999999998764321       1 66899999999888864    59999999975


Q ss_pred             CCCCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCC-----Cc---------ccccccc
Q 019878           77 EPWLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADEN-----QV---------HEEKYFC  139 (334)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~-----~~---------~~~~~~~  139 (334)
                      .. ...++..+++|+.++.++++++.+.   .+.+++|++||...+.........+.     ..         ..+..+.
T Consensus        74 ~~-~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (257)
T 1fjh_A           74 PQ-TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGN  152 (257)
T ss_dssp             TT-CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHH
T ss_pred             CC-cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccCCCCc
Confidence            41 2457789999999999999998743   24579999999988742211110000     00         0111234


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      ..|+.||.+.+.+.+.+.    ++|+++++++||.+.++.....  ............ .      ......+.+++|+|
T Consensus       153 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~-~------~~~~~~~~~~~dvA  223 (257)
T 1fjh_A          153 LAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAG--LQDPRYGESIAK-F------VPPMGRRAEPSEMA  223 (257)
T ss_dssp             HHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC------------------------C------CCSTTSCCCTHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhh--ccchhHHHHHHh-c------ccccCCCCCHHHHH
Confidence            789999999998887654    3589999999999988753211  000000010100 0      01122478999999


Q ss_pred             HHHHHHhhcC---CCCCeEEecCC
Q 019878          216 DGHIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       216 ~a~~~~~~~~---~~g~~~~i~g~  236 (334)
                      ++++.++..+   ..|+++++.|.
T Consensus       224 ~~~~~l~~~~~~~~tG~~~~vdgG  247 (257)
T 1fjh_A          224 SVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHhCchhcCCcCCEEEECCC
Confidence            9999998764   35889999654

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.89  E-value=4.5e-23  Score=175.29  Aligned_cols=208  Identities=17%  Similarity=0.148  Sum_probs=153.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+....+..  ...+.++.+|++|.+++.++++       ++|++||+
T Consensus        11 ~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~n   90 (248)
T 3op4_A           11 VALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNN   90 (248)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEEC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            59999999999999999999999999999998654322110  0257889999999998888775       68999999


Q ss_pred             ccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChHH
Q 019878           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (334)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (334)
                      ||....      ..++++..+++|+.++.++++++.+.   .+..++|++||...+.+..              +...|+
T Consensus        91 Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~--------------~~~~Y~  156 (248)
T 3op4_A           91 AGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNA--------------GQANYA  156 (248)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT--------------TCHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCC--------------CChHHH
Confidence            997432      22345668899999999999998652   1456999999987664332              136799


Q ss_pred             HHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHH
Q 019878          144 RSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHI  219 (334)
Q Consensus       144 ~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  219 (334)
                      .+|.+.+.+.+.+.    ++|+++..++||.+..+.......   ..........         ....+.+++|+|+++.
T Consensus       157 asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~---------p~~r~~~p~dva~~v~  224 (248)
T 3op4_A          157 AAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALND---EQRTATLAQV---------PAGRLGDPREIASAVA  224 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCH---HHHHHHHHTC---------TTCSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCH---HHHHHHHhcC---------CCCCCcCHHHHHHHHH
Confidence            99998877776644    468999999999998875432211   1111112221         2235788999999999


Q ss_pred             HHhhcC---CCCCeEEecC
Q 019878          220 AAMEKG---RSGERYLLTG  235 (334)
Q Consensus       220 ~~~~~~---~~g~~~~i~g  235 (334)
                      .++...   -.|+++++.|
T Consensus       225 ~L~s~~~~~itG~~i~vdg  243 (248)
T 3op4_A          225 FLASPEAAYITGETLHVNG  243 (248)
T ss_dssp             HHHSGGGTTCCSCEEEEST
T ss_pred             HHcCCccCCccCcEEEECC
Confidence            988654   2599999965

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.89  E-value=6.7e-23  Score=176.24  Aligned_cols=210  Identities=14%  Similarity=0.145  Sum_probs=148.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-------CCCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-------SEGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+.++...+.       ...++.++.+|++|.+++.++++       ++|
T Consensus        15 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   94 (267)
T 1iy8_A           15 VVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRID   94 (267)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            5999999999999999999999999999999864322110       01268899999999998887775       589


Q ss_pred             EEEEeccccCC-------CCCCcccchhhhhHHHHHHHHHHH----hcCCCcEEEEecccceeccCCCccCCCCCccccc
Q 019878           68 VIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAK----ETKTVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (334)
Q Consensus        68 ~vih~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~  136 (334)
                      +|||+||....       ..++++..+++|+.++..+++++.    +. +.+++|++||...+....             
T Consensus        95 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~-------------  160 (267)
T 1iy8_A           95 GFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ-GSGMVVNTASVGGIRGIG-------------  160 (267)
T ss_dssp             EEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSBCS-------------
T ss_pred             EEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEEcchhhccCCC-------------
Confidence            99999997432       112345688999999887766654    33 457999999987654321             


Q ss_pred             cccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCc-----hhHHHHHHHHHHcCCCCccccCCCCcee
Q 019878          137 YFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTT-----GNLVAKLMIERFNGRLPGYIGYGNDRFS  207 (334)
Q Consensus       137 ~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (334)
                       +...|+.+|.+.+.+.+.+.    ++|+++++++||.++++.....     ............ ..        .....
T Consensus       161 -~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~--------~p~~r  230 (267)
T 1iy8_A          161 -NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFI-QV--------NPSKR  230 (267)
T ss_dssp             -SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHH-TT--------CTTCS
T ss_pred             -CCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHh-cc--------CCCCC
Confidence             13679999999988877654    4599999999999987631000     000000000111 11        11234


Q ss_pred             eeeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          208 FCHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       208 ~i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +.+++|+|+++..++..+   ..|+++++.|
T Consensus       231 ~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdG  261 (267)
T 1iy8_A          231 YGEAPEIAAVVAFLLSDDASYVNATVVPIDG  261 (267)
T ss_dssp             CBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             CcCHHHHHHHHHHHcCccccCCCCCEEEECC
Confidence            789999999999998754   3689999964

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.89  E-value=2.4e-22  Score=170.68  Aligned_cols=202  Identities=21%  Similarity=0.166  Sum_probs=146.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~a~   74 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+++....      +..+.+|++|.+++.++++       ++|+|||+||
T Consensus        17 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~------~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag   90 (247)
T 1uzm_A           17 SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG------LFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAG   90 (247)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT------SEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH------hcCeeccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            59999999999999999999999999999998765433      2348899999998877765       5899999999


Q ss_pred             ccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChHHHH
Q 019878           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (334)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (334)
                      ....      ..++++..+++|+.++.++++++.+.   .+.+++|++||...+....              ....|+.+
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------~~~~Y~~s  156 (247)
T 1uzm_A           91 LSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIG--------------NQANYAAS  156 (247)
T ss_dssp             CCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-------------------CCHHHHHH
T ss_pred             CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCC--------------CChhHHHH
Confidence            7432      22345678899999999999988652   2467999999986653221              13679999


Q ss_pred             HHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHH
Q 019878          146 KAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAA  221 (334)
Q Consensus       146 K~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~  221 (334)
                      |.+.+.+.+.+.    .+|+++.+++|+.+.++...   ....... .......        ....+.+++|+|+++..+
T Consensus       157 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~---~~~~~~~-~~~~~~~--------p~~~~~~~~dvA~~~~~l  224 (247)
T 1uzm_A          157 KAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR---ALDERIQ-QGALQFI--------PAKRVGTPAEVAGVVSFL  224 (247)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH---HSCHHHH-HHHGGGC--------TTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchh---hcCHHHH-HHHHhcC--------CCCCCcCHHHHHHHHHHH
Confidence            998887777654    45899999999999765210   0001111 1111111        123478999999999999


Q ss_pred             hhcC---CCCCeEEecC
Q 019878          222 MEKG---RSGERYLLTG  235 (334)
Q Consensus       222 ~~~~---~~g~~~~i~g  235 (334)
                      +...   ..|+++++.|
T Consensus       225 ~s~~~~~~~G~~i~vdg  241 (247)
T 1uzm_A          225 ASEDASYISGAVIPVDG  241 (247)
T ss_dssp             HSGGGTTCCSCEEEEST
T ss_pred             cCccccCCcCCEEEECC
Confidence            8753   3689999964

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.89  E-value=2e-23  Score=178.85  Aligned_cols=214  Identities=16%  Similarity=0.075  Sum_probs=153.6

Q ss_pred             cEEEEcCC--ChhhHHHHHHHHhCCCeEEEEEcCCC---CCCCCCC-CCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTS---DISGLPS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~t--G~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+  |+||+++++.|+++|++|++++|+.+   ....+.. .+.+.++.+|++|.+++.++++       ++|+
T Consensus        10 ~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   89 (261)
T 2wyu_A           10 KALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGLDY   89 (261)
T ss_dssp             EEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred             EEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            59999999  99999999999999999999999863   1111100 1247889999999998887775       6899


Q ss_pred             EEEeccccCC----------CCCCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEecccceeccCCCccCCCCCcccccc
Q 019878           69 IFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        69 vih~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~  137 (334)
                      |||+||....          ..++++..+++|+.++.++++++.+... ..++|++||...+...+              
T Consensus        90 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~--------------  155 (261)
T 2wyu_A           90 LVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVP--------------  155 (261)
T ss_dssp             EEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCT--------------
T ss_pred             EEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCC--------------
Confidence            9999997431          1234556889999999999999987621 24899999977654321              


Q ss_pred             ccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHH
Q 019878          138 FCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                      +...|+.+|.+.+.+.+.+.    ++|+++.+++|+.++++...... .............+         ...+.+++|
T Consensus       156 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~p---------~~~~~~~~d  225 (261)
T 2wyu_A          156 KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIP-GFTKMYDRVAQTAP---------LRRNITQEE  225 (261)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCT-THHHHHHHHHHHST---------TSSCCCHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhcc-ccHHHHHHHHhcCC---------CCCCCCHHH
Confidence            12569999999998887754    35999999999999997532111 11222222211111         123678999


Q ss_pred             HHHHHHHHhhcC---CCCCeEEecC-CCCC
Q 019878          214 VVDGHIAAMEKG---RSGERYLLTG-ENAS  239 (334)
Q Consensus       214 ~a~a~~~~~~~~---~~g~~~~i~g-~~~s  239 (334)
                      +|+++..++...   ..|+++++.| ..++
T Consensus       226 va~~v~~l~s~~~~~~tG~~~~vdgG~~~~  255 (261)
T 2wyu_A          226 VGNLGLFLLSPLASGITGEVVYVDAGYHIM  255 (261)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHHHHHHcChhhcCCCCCEEEECCCcccc
Confidence            999999998643   3689999964 4443

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.89  E-value=1.1e-22  Score=174.65  Aligned_cols=209  Identities=17%  Similarity=0.143  Sum_probs=150.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC-----CCC-CCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-----LPS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+......     +.. ..++.++.+|++|.+++.++++       ++|+
T Consensus         9 ~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~   88 (264)
T 3i4f_A            9 HALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDF   88 (264)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            49999999999999999999999999999887532100     000 1268999999999999888775       6899


Q ss_pred             EEEeccc--cCC------CCCCcccchhhhhHHHHHHHHHH----HhcCCCcEEEEecccceeccCCCccCCCCCccccc
Q 019878           69 IFHTAAL--VEP------WLPDPSRFFAVNVEGLKNVVQAA----KETKTVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (334)
Q Consensus        69 vih~a~~--~~~------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~  136 (334)
                      |||+||.  ...      ..+++...+++|+.++.++++++    ++. +..++|++||...++.....           
T Consensus        89 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~~~~~~-----------  156 (264)
T 3i4f_A           89 LINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQ-NFGRIINYGFQGADSAPGWI-----------  156 (264)
T ss_dssp             EECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCTTGGGCCCCT-----------
T ss_pred             EEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-CCCeEEEEeechhcccCCCC-----------
Confidence            9999994  211      12234567899999999999998    444 46799999998655322211           


Q ss_pred             cccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHH
Q 019878          137 YFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVD  212 (334)
Q Consensus       137 ~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  212 (334)
                       +.+.|+.+|++.+.+.+.+.    ++|+++.+++||.++++.....   ..... .....        ......+.+++
T Consensus       157 -~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~-~~~~~--------~~p~~r~~~~~  223 (264)
T 3i4f_A          157 -YRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEAT---IQEAR-QLKEH--------NTPIGRSGTGE  223 (264)
T ss_dssp             -TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCC---HHHHH-HC----------------CCCCHH
T ss_pred             -CCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhc---cHHHH-HHHhh--------cCCCCCCcCHH
Confidence             13679999999988887654    3589999999999999854322   11211 11111        11223577899


Q ss_pred             HHHHHHHHHhhcC---CCCCeEEecC
Q 019878          213 DVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       213 D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      |+|+++..++...   ..|+++++.|
T Consensus       224 dva~~v~~l~s~~~~~itG~~i~vdG  249 (264)
T 3i4f_A          224 DIARTISFLCEDDSDMITGTIIEVTG  249 (264)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESC
T ss_pred             HHHHHHHHHcCcccCCCCCcEEEEcC
Confidence            9999999998754   3699999964

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.89  E-value=1.9e-22  Score=171.76  Aligned_cols=202  Identities=18%  Similarity=0.175  Sum_probs=148.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~a~   74 (334)
                      ++|||||+|+||+++++.|+++|++|++++|++++..      .+.++.+|++|.+++.++++       .+|+|||+||
T Consensus        23 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nAg   96 (253)
T 2nm0_A           23 SVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE------GFLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAG   96 (253)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT------TSEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEEECS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc------cceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            5999999999999999999999999999999876432      47889999999998877765       3799999999


Q ss_pred             ccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChHHHH
Q 019878           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (334)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (334)
                      ....      ..++++..+++|+.++.++++++.+.   .+.+++|++||...+....              ....|+.+
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~--------------~~~~Y~as  162 (253)
T 2nm0_A           97 VTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSA--------------GQANYAAS  162 (253)
T ss_dssp             CCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHH--------------HHHHHHHH
T ss_pred             CCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCC--------------CcHHHHHH
Confidence            7432      33456778899999999999987653   1457999999976653211              13679999


Q ss_pred             HHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHH
Q 019878          146 KAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAA  221 (334)
Q Consensus       146 K~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~  221 (334)
                      |.+.+.+.+.+.    ..|+++.+++|+.+.++....   .......... ...        ....++.++|+|+++..+
T Consensus       163 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~---~~~~~~~~~~-~~~--------p~~~~~~p~dvA~~i~~l  230 (253)
T 2nm0_A          163 KAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKV---LTDEQRANIV-SQV--------PLGRYARPEEIAATVRFL  230 (253)
T ss_dssp             HHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC------------CHHHHH-TTC--------TTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhh---cCHHHHHHHH-hcC--------CCCCCcCHHHHHHHHHHH
Confidence            999988877654    358999999999997764211   0000111111 111        112478999999999999


Q ss_pred             hhcC---CCCCeEEecC
Q 019878          222 MEKG---RSGERYLLTG  235 (334)
Q Consensus       222 ~~~~---~~g~~~~i~g  235 (334)
                      +..+   ..|+++.+.|
T Consensus       231 ~s~~~~~~tG~~i~vdG  247 (253)
T 2nm0_A          231 ASDDASYITGAVIPVDG  247 (253)
T ss_dssp             HSGGGTTCCSCEEEEST
T ss_pred             hCccccCCcCcEEEECC
Confidence            8754   3688999964

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.89  E-value=2.3e-22  Score=171.00  Aligned_cols=209  Identities=13%  Similarity=0.147  Sum_probs=146.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCC-CCCCC-CCC-CCCeEEEEcCCCChhhHHHHhc-------CCCEEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISG-LPS-EGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~-~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih   71 (334)
                      ++|||||+|+||+++++.|+++|++|++++|++ ++... +.. ..++.++.+|++|.+++.++++       ++|+|||
T Consensus         9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~   88 (249)
T 2ew8_A            9 LAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVN   88 (249)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            599999999999999999999999999999987 32211 100 1268899999999998887753       6899999


Q ss_pred             eccccCC------CCCCcccchhhhhHHHHHHHHHH----HhcCCCcEEEEecccceeccCCCccCCCCCccccccccCh
Q 019878           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAA----KETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (334)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  141 (334)
                      +||....      ..++++..+++|+.++.++++++    ++. +.+++|++||...+.+.+              +...
T Consensus        89 nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~--------------~~~~  153 (249)
T 2ew8_A           89 NAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN-GWGRIINLTSTTYWLKIE--------------AYTH  153 (249)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGGSCCS--------------SCHH
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCeEEEEEcchhhccCCC--------------Cchh
Confidence            9997432      12234568899999988888884    444 467999999988775432              1367


Q ss_pred             HHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHH
Q 019878          142 YERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDG  217 (334)
Q Consensus       142 Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  217 (334)
                      |+.+|.+.+.+.+.+.    ++|+++++++|+.+.++....  ..... ...... ...      .....+.+++|+|++
T Consensus       154 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~-~~~~~~-~~~------~~~~~~~~p~dva~~  223 (249)
T 2ew8_A          154 YISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEA--SALSA-MFDVLP-NML------QAIPRLQVPLDLTGA  223 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----------------------CTT------SSSCSCCCTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchh--ccccc-hhhHHH-Hhh------CccCCCCCHHHHHHH
Confidence            9999999998887754    358999999999998874210  00000 000000 000      122347899999999


Q ss_pred             HHHHhhcC---CCCCeEEecC
Q 019878          218 HIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       218 ~~~~~~~~---~~g~~~~i~g  235 (334)
                      +..++...   ..|+++++.|
T Consensus       224 ~~~l~s~~~~~~tG~~~~vdG  244 (249)
T 2ew8_A          224 AAFLASDDASFITGQTLAVDG  244 (249)
T ss_dssp             HHHHTSGGGTTCCSCEEEESS
T ss_pred             HHHHcCcccCCCCCcEEEECC
Confidence            99998653   3688999964

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.89  E-value=3.2e-22  Score=169.65  Aligned_cols=204  Identities=16%  Similarity=0.180  Sum_probs=152.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHh-CCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc-----CCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLK-QGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-----GCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-----~~d~vih~a~~   75 (334)
                      ++|||||+|+||.++++.|++ .|++|++.+|+.....     ..+.++.+|++|.+++.++++     ++|++||+||.
T Consensus         6 ~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nAg~   80 (244)
T 4e4y_A            6 NYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA-----ENLKFIKADLTKQQDITNVLDIIKNVSFDGIFLNAGI   80 (244)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCC-----TTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEECCCC
T ss_pred             eEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccccc-----ccceEEecCcCCHHHHHHHHHHHHhCCCCEEEECCcc
Confidence            599999999999999999998 7899999998875221     268999999999999888875     68999999997


Q ss_pred             cCC------CCCCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHH
Q 019878           76 VEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAV  148 (334)
Q Consensus        76 ~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~  148 (334)
                      ...      ..++++..+++|+.++.++++++.+... -.++|++||...+...+.              ...|+.+|.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--------------~~~Y~asKaa  146 (244)
T 4e4y_A           81 LIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPN--------------SFAYTLSKGA  146 (244)
T ss_dssp             CCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTT--------------BHHHHHHHHH
T ss_pred             CCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCC--------------CchhHHHHHH
Confidence            432      1223456889999999999999987621 138999999877654321              3679999999


Q ss_pred             HHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHH----------HHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          149 ADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKL----------MIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       149 ~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      .+.+.+.+.    ++|+++.+++||.+.++..   .......          ........        .....+.+++|+
T Consensus       147 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~---~~~~~~~~~~~~~~~~~~~~~~~~~--------~p~~r~~~p~dv  215 (244)
T 4e4y_A          147 IAQMTKSLALDLAKYQIRVNTVCPGTVDTDLY---RNLIQKYANNVGISFDEAQKQEEKE--------FPLNRIAQPQEI  215 (244)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEESCBCCHHH---HHHHHHHHHHHTCCHHHHHHHHHTT--------STTSSCBCHHHH
T ss_pred             HHHHHHHHHHHHHHcCeEEEEEecCccCchhh---HHHHHhhhhhcCCCHHHHHHHHhhc--------CCCCCCcCHHHH
Confidence            998887654    4699999999999987631   1111110          11111111        123457889999


Q ss_pred             HHHHHHHhhcC---CCCCeEEecC
Q 019878          215 VDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       215 a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      |+++..++...   ..|+++++.|
T Consensus       216 A~~v~~l~s~~~~~itG~~i~vdG  239 (244)
T 4e4y_A          216 AELVIFLLSDKSKFMTGGLIPIDG  239 (244)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHhcCccccccCCeEeECC
Confidence            99999998753   3689999964

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.89  E-value=1e-22  Score=175.67  Aligned_cols=211  Identities=17%  Similarity=0.115  Sum_probs=149.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----C-CCCCeEEEEcCCCChhhHHHHh--------cCCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDAC--------FGCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~-~~~~v~~~~~Dl~d~~~~~~~~--------~~~d~   68 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+++....+    . ...++.++.+|++|.+++.+++        .++|+
T Consensus        23 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~  102 (273)
T 1ae1_A           23 TALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNI  102 (273)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCCE
T ss_pred             EEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCcE
Confidence            599999999999999999999999999999986432211    0 0126889999999999888776        46899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      +||+||....      ..+++...+++|+.++.++++++...   .+.+++|++||...+...+.              .
T Consensus       103 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------------~  168 (273)
T 1ae1_A          103 LVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPS--------------V  168 (273)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTT--------------C
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCC--------------c
Confidence            9999997432      11234567889999999999988532   14579999999888764321              3


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhH---HHHHHHHHHcCCCCccccCCCCceeeeeHH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNL---VAKLMIERFNGRLPGYIGYGNDRFSFCHVD  212 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  212 (334)
                      ..|+.+|.+.+.+.+.+.    ++|+++++++|+.++++........   ........... .+        ...+.+++
T Consensus       169 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~p--------~~r~~~p~  239 (273)
T 1ae1_A          169 SLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVK-TP--------MGRAGKPQ  239 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHH-ST--------TCSCBCHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhc-CC--------CCCCcCHH
Confidence            679999999988877654    4599999999999998853211000   00111111111 11        12478899


Q ss_pred             HHHHHHHHHhhcC---CCCCeEEecC
Q 019878          213 DVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       213 D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      |+|+++..++...   ..|+++++.|
T Consensus       240 dvA~~v~~l~s~~~~~~tG~~i~vdG  265 (273)
T 1ae1_A          240 EVSALIAFLCFPAASYITGQIIWADG  265 (273)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHhCccccCcCCCEEEECC
Confidence            9999999988653   3689999964

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.89  E-value=6.6e-23  Score=176.08  Aligned_cols=210  Identities=13%  Similarity=0.050  Sum_probs=151.9

Q ss_pred             cEEEEcCC--ChhhHHHHHHHHhCCCeEEEEEcCCCCCC---CCC-CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTSDIS---GLP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~t--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+  |+||.++++.|+++|++|++++|++....   .+. ..+...++.+|++|.+++.++++       ++|+
T Consensus        11 ~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   90 (265)
T 1qsg_A           11 RILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDG   90 (265)
T ss_dssp             EEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSEEE
T ss_pred             EEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            49999999  99999999999999999999999862100   010 00134789999999998887775       5899


Q ss_pred             EEEeccccC-----------CCCCCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEecccceeccCCCccCCCCCccccc
Q 019878           69 IFHTAALVE-----------PWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (334)
Q Consensus        69 vih~a~~~~-----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~  136 (334)
                      |||+||...           ...++++..+++|+.++.++++++.+... ..++|++||...+...+             
T Consensus        91 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~-------------  157 (265)
T 1qsg_A           91 FVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIP-------------  157 (265)
T ss_dssp             EEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT-------------
T ss_pred             EEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCC-------------
Confidence            999999743           12234556889999999999999988621 24899999977664322             


Q ss_pred             cccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHH
Q 019878          137 YFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVD  212 (334)
Q Consensus       137 ~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  212 (334)
                       +.+.|+.+|.+.+.+.+.+.    ++|+++.+++|+.++++...... .............+         ...+.+++
T Consensus       158 -~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~p---------~~~~~~~~  226 (265)
T 1qsg_A          158 -NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK-DFRKMLAHCEAVTP---------IRRTVTIE  226 (265)
T ss_dssp             -TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGST-THHHHHHHHHHHST---------TSSCCCHH
T ss_pred             -CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhccc-ccHHHHHHHHhcCC---------CCCCCCHH
Confidence             13679999999999888764    34899999999999998532111 11222222221111         12367899


Q ss_pred             HHHHHHHHHhhcC---CCCCeEEecC
Q 019878          213 DVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       213 D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      |+|+++..++...   ..|+++++.|
T Consensus       227 dva~~v~~l~s~~~~~~tG~~~~vdg  252 (265)
T 1qsg_A          227 DVGNSAAFLCSDLSAGISGEVVHVDG  252 (265)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHhCchhcCccCCEEEECC
Confidence            9999999998653   2588999964

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.89  E-value=1.5e-22  Score=171.74  Aligned_cols=207  Identities=20%  Similarity=0.163  Sum_probs=150.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~a~   74 (334)
                      ++|||||+|+||.++++.|+++|++|++++|++++...+....++.++.+|++|.+++.++++       ++|+|||+||
T Consensus         7 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn~Ag   86 (245)
T 1uls_A            7 AVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAG   86 (245)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            599999999999999999999999999999986543221111137889999999998887765       4899999999


Q ss_pred             ccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChHHHH
Q 019878           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (334)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (334)
                      ....      ..++++..+++|+.++.++++++.+.   .+.+++|++||...++..               ....|+.+
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---------------~~~~Y~as  151 (245)
T 1uls_A           87 ITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNL---------------GQANYAAS  151 (245)
T ss_dssp             CCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCT---------------TCHHHHHH
T ss_pred             CCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCCC---------------CchhHHHH
Confidence            7432      11234567899999999999988764   245799999998733321               12669999


Q ss_pred             HHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHH
Q 019878          146 KAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAA  221 (334)
Q Consensus       146 K~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~  221 (334)
                      |...+.+.+.+.    ++|+++++++||.+.++.......   ......... .+        ...+.+++|+|+++..+
T Consensus       152 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~-~p--------~~~~~~~~dvA~~v~~l  219 (245)
T 1uls_A          152 MAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPE---KVREKAIAA-TP--------LGRAGKPLEVAYAALFL  219 (245)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCH---HHHHHHHHT-CT--------TCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCH---HHHHHHHhh-CC--------CCCCcCHHHHHHHHHHH
Confidence            998887776643    468999999999998875322111   111111111 11        11377899999999999


Q ss_pred             hhcC---CCCCeEEecC
Q 019878          222 MEKG---RSGERYLLTG  235 (334)
Q Consensus       222 ~~~~---~~g~~~~i~g  235 (334)
                      +...   ..|+++++.|
T Consensus       220 ~s~~~~~~tG~~~~vdg  236 (245)
T 1uls_A          220 LSDESSFITGQVLFVDG  236 (245)
T ss_dssp             HSGGGTTCCSCEEEEST
T ss_pred             hCchhcCCcCCEEEECC
Confidence            8753   3688999964

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.89  E-value=2.9e-23  Score=179.04  Aligned_cols=210  Identities=20%  Similarity=0.226  Sum_probs=145.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEE-EcCCCCCCCC----C-CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRAL-VRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~----~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+|+||+++++.|+++|++|+++ .|+.+....+    . ...++.++.+|++|.+++.++++       ++|+
T Consensus        28 ~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~  107 (272)
T 4e3z_A           28 VVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRLDG  107 (272)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            49999999999999999999999999887 4443321111    0 01368999999999998887765       5899


Q ss_pred             EEEeccccCC-------CCCCcccchhhhhHHHHHHHHHHHhcC------CCcEEEEecccceeccCCCccCCCCCcccc
Q 019878           69 IFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK------TVEKIIYTSSFFALGSTDGYIADENQVHEE  135 (334)
Q Consensus        69 vih~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~------~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~  135 (334)
                      |||+||....       ..+++...+++|+.++.++++++.+..      ...++|++||...+.....           
T Consensus       108 li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-----------  176 (272)
T 4e3z_A          108 LVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSAT-----------  176 (272)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTT-----------
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCC-----------
Confidence            9999997532       223456688999999999999987651      2458999999877643221           


Q ss_pred             ccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeH
Q 019878          136 KYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHV  211 (334)
Q Consensus       136 ~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  211 (334)
                        ....|+.+|.+.+.+.+.+.    ++|+++..++||.+.++....  ............         ......+.++
T Consensus       177 --~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~--~~~~~~~~~~~~---------~~~~~~~~~~  243 (272)
T 4e3z_A          177 --QYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHAS--GGLPDRAREMAP---------SVPMQRAGMP  243 (272)
T ss_dssp             --TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-----------------------------CCTTSSCBCH
T ss_pred             --CcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccc--cCChHHHHHHhh---------cCCcCCCcCH
Confidence              12569999999998877654    348999999999999875321  111111111111         1122346789


Q ss_pred             HHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          212 DDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       212 ~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +|+|++++.++...   ..|+++++.|
T Consensus       244 edvA~~i~~l~s~~~~~~tG~~i~vdg  270 (272)
T 4e3z_A          244 EEVADAILYLLSPSASYVTGSILNVSG  270 (272)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHhCCccccccCCEEeecC
Confidence            99999999998653   3699999964

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.89  E-value=2.1e-23  Score=178.85  Aligned_cols=216  Identities=15%  Similarity=0.080  Sum_probs=147.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.++...+..  ...+.++.+|++|.+++.++++       ++|+|||+
T Consensus        11 ~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~   90 (261)
T 3n74_A           11 VALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDILVNN   90 (261)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            59999999999999999999999999999998654322110  1268999999999998887775       68999999


Q ss_pred             ccccCC-------CCCCcccchhhhhHHHHHHHHHHHhcC-------CCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           73 AALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK-------TVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        73 a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~-------~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      ||....       ..+++...+++|+.++.++++++.+..       ...++|++||...+.+.+.              
T Consensus        91 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------  156 (261)
T 3n74_A           91 AGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPN--------------  156 (261)
T ss_dssp             CCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTT--------------
T ss_pred             CccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCC--------------
Confidence            997431       122345678999999999998886551       1346999999876643321              


Q ss_pred             cChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      ...|+.+|++.+.+.+.+.    ++|+++..++|+.+.++...............        .+........+++++|+
T Consensus       157 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~dv  228 (261)
T 3n74_A          157 LAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRK--------KFRDSIPMGRLLKPDDL  228 (261)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---------------------------------CTTSSCCCHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHH--------HHhhcCCcCCCcCHHHH
Confidence            3669999999988887754    35899999999999887432110000000001        11122233468899999


Q ss_pred             HHHHHHHhhcC---CCCCeEEec-CCCCC
Q 019878          215 VDGHIAAMEKG---RSGERYLLT-GENAS  239 (334)
Q Consensus       215 a~a~~~~~~~~---~~g~~~~i~-g~~~s  239 (334)
                      |+++..++...   ..|+++++. |..++
T Consensus       229 a~~~~~l~s~~~~~itG~~i~vdgG~~~~  257 (261)
T 3n74_A          229 AEAAAFLCSPQASMITGVALDVDGGRSIG  257 (261)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTTTTC-
T ss_pred             HHHHHHHcCCcccCcCCcEEEecCCcccC
Confidence            99999998643   369999996 45453

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.89  E-value=4e-24  Score=183.93  Aligned_cols=218  Identities=18%  Similarity=0.178  Sum_probs=151.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC----CCCC---CCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS----GLPS---EGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~---~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+.++..    .+..   ..++.++.+|++|.+++.++++       ++|
T Consensus         9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   88 (267)
T 2gdz_A            9 VALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLD   88 (267)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             EEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5999999999999999999999999999999764321    0111   1258899999999998887765       479


Q ss_pred             EEEEeccccCCCCCCcccchhhhhHHHHHHHHHH----HhcC--CCcEEEEecccceeccCCCccCCCCCccccccccCh
Q 019878           68 VIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAA----KETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (334)
Q Consensus        68 ~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~--~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  141 (334)
                      +|||+||...  .+++...+++|+.++..+.+.+    ++.+  ..+++|++||...+.+...              ...
T Consensus        89 ~lv~~Ag~~~--~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~  152 (267)
T 2gdz_A           89 ILVNNAGVNN--EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQ--------------QPV  152 (267)
T ss_dssp             EEEECCCCCC--SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT--------------CHH
T ss_pred             EEEECCCCCC--hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCC--------------Cch
Confidence            9999999753  3567788999999766555544    4431  1569999999887754321              256


Q ss_pred             HHHHHHHHHHHHHHH------hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCcc---ccCCCCceeeeeHH
Q 019878          142 YERSKAVADKIALQA------ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGY---IGYGNDRFSFCHVD  212 (334)
Q Consensus       142 Y~~sK~~~E~~~~~~------~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~v~  212 (334)
                      |+.+|.+.+.+.+.+      ...|+++++++||.+.++.......  ....     +.....   ......+..+++++
T Consensus       153 Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~-----~~~~~~~~~~~~~~~~~~~~~~~  225 (267)
T 2gdz_A          153 YCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEK--EENM-----GQYIEYKDHIKDMIKYYGILDPP  225 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGC--HHHH-----GGGGGGHHHHHHHHHHHCCBCHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhcccc--cccc-----chhhhHHHHHHHHhccccCCCHH
Confidence            999999999887753      3468999999999997752100000  0000     000000   00001123578999


Q ss_pred             HHHHHHHHHhhcC-CCCCeEEecC-CCCCHHH
Q 019878          213 DVVDGHIAAMEKG-RSGERYLLTG-ENASFMQ  242 (334)
Q Consensus       213 D~a~a~~~~~~~~-~~g~~~~i~g-~~~s~~e  242 (334)
                      |+|++++.++... ..|+++++++ +..++.|
T Consensus       226 dvA~~v~~l~s~~~~~G~~~~v~gg~~~~~~~  257 (267)
T 2gdz_A          226 LIANGLITLIEDDALNGAIMKITTSKGIHFQD  257 (267)
T ss_dssp             HHHHHHHHHHHCTTCSSCEEEEETTTEEEECC
T ss_pred             HHHHHHHHHhcCcCCCCcEEEecCCCcccccC
Confidence            9999999999865 4699999964 5555544

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.89  E-value=1e-22  Score=172.96  Aligned_cols=209  Identities=16%  Similarity=0.175  Sum_probs=149.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEc-CCCCCCCC----C-CCCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~----~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      +++|||||+|+||.++++.|+++|++|++++| ++++...+    . ...++.++.+|++|.+++.++++       ++|
T Consensus         5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   84 (246)
T 2uvd_A            5 KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVD   84 (246)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            36999999999999999999999999999998 43322110    0 01268899999999998888775       699


Q ss_pred             EEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        68 ~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      ++||+||....      ..++++..+++|+.++.++++++.+.   .+.+++|++||...+...+              .
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------~  150 (246)
T 2uvd_A           85 ILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNP--------------G  150 (246)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT--------------T
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCC--------------C
Confidence            99999997432      12234568899999977777766532   1467999999987654321              1


Q ss_pred             cChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          139 CTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      ...|+.+|.+.+.+.+.+    .++|+++++++|+.+.++.........   ....... .+        ...+++++|+
T Consensus       151 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~---~~~~~~~-~p--------~~~~~~~~dv  218 (246)
T 2uvd_A          151 QANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENI---KAEMLKL-IP--------AAQFGEAQDI  218 (246)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTH---HHHHHHT-CT--------TCSCBCHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHH---HHHHHhc-CC--------CCCCcCHHHH
Confidence            367999999888776654    346999999999999887432111111   1111111 11        1247899999


Q ss_pred             HHHHHHHhhcC---CCCCeEEecC
Q 019878          215 VDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       215 a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      |+++..++..+   ..|+++++.|
T Consensus       219 A~~~~~l~s~~~~~~tG~~~~vdg  242 (246)
T 2uvd_A          219 ANAVTFFASDQSKYITGQTLNVDG  242 (246)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHcCchhcCCCCCEEEECc
Confidence            99999998653   3688999964

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.89  E-value=7.9e-23  Score=176.49  Aligned_cols=211  Identities=18%  Similarity=0.148  Sum_probs=151.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+.+....+..  ..++.++.+|++|.+++.++++       ++|+|||+
T Consensus        29 ~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~n  108 (277)
T 4dqx_A           29 VCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNN  108 (277)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            59999999999999999999999999999998653221110  1268899999999998887775       68999999


Q ss_pred             ccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChHH
Q 019878           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (334)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (334)
                      ||....      ..++++..+++|+.++.++++++.+.   .+..++|++||...+.....              .+.|+
T Consensus       109 Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~  174 (277)
T 4dqx_A          109 AGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIAD--------------RTAYV  174 (277)
T ss_dssp             CCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTT--------------BHHHH
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCC--------------ChhHH
Confidence            997432      12234567889999999999988653   13469999999877654321              36799


Q ss_pred             HHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCc---hhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHH
Q 019878          144 RSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTT---GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVD  216 (334)
Q Consensus       144 ~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  216 (334)
                      .+|.+.+.+.+.+.    ++|+++..++||.+.++.....   ...........         ........+.+++|+|+
T Consensus       175 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~---------~~~~~~~r~~~pedvA~  245 (277)
T 4dqx_A          175 ASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDF---------NARAVMDRMGTAEEIAE  245 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHH---------HTTSTTCSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHH---------HhcCcccCCcCHHHHHH
Confidence            99999988877654    4589999999999977520000   00000111111         11122345778999999


Q ss_pred             HHHHHhhcC---CCCCeEEecC
Q 019878          217 GHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       217 a~~~~~~~~---~~g~~~~i~g  235 (334)
                      ++..++...   ..|+++++.|
T Consensus       246 ~v~~L~s~~~~~itG~~i~vdG  267 (277)
T 4dqx_A          246 AMLFLASDRSRFATGSILTVDG  267 (277)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESS
T ss_pred             HHHHHhCCccCCCcCCEEEECC
Confidence            999998754   3699999964

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.89  E-value=2.2e-22  Score=171.16  Aligned_cols=205  Identities=14%  Similarity=0.146  Sum_probs=144.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCC-ChhhHHHHhcCCCEEEEeccccCC-
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVT-DYRSLVDACFGCHVIFHTAALVEP-   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~-d~~~~~~~~~~~d~vih~a~~~~~-   78 (334)
                      +++|||||+|+||+++++.|+++|++|++++|+++....+   +.+.++ +|+. +.+.+.+.+.++|+|||+||.... 
T Consensus        20 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~-~D~~~~~~~~~~~~~~iD~lv~~Ag~~~~~   95 (249)
T 1o5i_A           20 KGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS---GHRYVV-CDLRKDLDLLFEKVKEVDILVLNAGGPKAG   95 (249)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT---CSEEEE-CCTTTCHHHHHHHSCCCSEEEECCCCCCCB
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHhh---CCeEEE-eeHHHHHHHHHHHhcCCCEEEECCCCCCCC
Confidence            4699999999999999999999999999999986332222   256777 9993 333344444479999999997432 


Q ss_pred             -----CCCCcccchhhhhHHHHHHHHHH----HhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHH
Q 019878           79 -----WLPDPSRFFAVNVEGLKNVVQAA----KETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVA  149 (334)
Q Consensus        79 -----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~  149 (334)
                           ..+++...+++|+.++.++.+++    ++. +.+++|++||...+.....              ...|+.+|.+.
T Consensus        96 ~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~--------------~~~Y~~sK~a~  160 (249)
T 1o5i_A           96 FFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-GWGRIVAITSFSVISPIEN--------------LYTSNSARMAL  160 (249)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCTT--------------BHHHHHHHHHH
T ss_pred             ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEcchHhcCCCCC--------------CchHHHHHHHH
Confidence                 12234567899999977765554    444 4679999999988754321              36799999998


Q ss_pred             HHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcC
Q 019878          150 DKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG  225 (334)
Q Consensus       150 E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~  225 (334)
                      +.+.+.+.    .+|++++++||+.++++...   ...............        ....+.+++|+|+++..++...
T Consensus       161 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~---~~~~~~~~~~~~~~~--------p~~~~~~~~dvA~~i~~l~s~~  229 (249)
T 1o5i_A          161 TGFLKTLSFEVAPYGITVNCVAPGWTETERVK---ELLSEEKKKQVESQI--------PMRRMAKPEEIASVVAFLCSEK  229 (249)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCTTHH---HHSCHHHHHHHHTTS--------TTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHhhhcCeEEEEEeeCCCccCccc---ccchhhHHHHHHhcC--------CCCCCcCHHHHHHHHHHHcCcc
Confidence            88777654    45899999999999987421   110111110111111        1235789999999999988753


Q ss_pred             ---CCCCeEEecC
Q 019878          226 ---RSGERYLLTG  235 (334)
Q Consensus       226 ---~~g~~~~i~g  235 (334)
                         ..|+++++.|
T Consensus       230 ~~~~tG~~~~vdg  242 (249)
T 1o5i_A          230 ASYLTGQTIVVDG  242 (249)
T ss_dssp             GTTCCSCEEEEST
T ss_pred             ccCCCCCEEEECC
Confidence               3589999965

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.89  E-value=1.9e-22  Score=170.47  Aligned_cols=207  Identities=18%  Similarity=0.192  Sum_probs=149.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~a~   74 (334)
                      ++|||||+|+||+++++.|+++|++|++++|++++..  ... ++.++.+|++| +++.++++       ++|++||+||
T Consensus         4 ~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~--~~~-~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~Ag   79 (239)
T 2ekp_A            4 KALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAA--QSL-GAVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHAAA   79 (239)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH--HHH-TCEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEECCC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--Hhh-CcEEEecCCch-HHHHHHHHHHHHHcCCCCEEEECCC
Confidence            6999999999999999999999999999999875411  001 37889999999 76665543       6999999999


Q ss_pred             ccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChHHHH
Q 019878           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (334)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (334)
                      ....      ..++++..+++|+.++.++++++.+.   .+.+++|++||...+.....            ++.+.|+.+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------~~~~~Y~~s  147 (239)
T 2ekp_A           80 VNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGP------------VPIPAYTTA  147 (239)
T ss_dssp             CCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT------------SCCHHHHHH
T ss_pred             CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCC------------CCCccHHHH
Confidence            7432      12235568899999999999988532   14679999999887754310            113679999


Q ss_pred             HHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHH--HHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHH
Q 019878          146 KAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLV--AKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHI  219 (334)
Q Consensus       146 K~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  219 (334)
                      |.+.+.+.+.+.    ++|++++++||+.+.++...   ...  ........ ...+        ...+..++|+|+++.
T Consensus       148 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~---~~~~~~~~~~~~~-~~~p--------~~~~~~~~dvA~~~~  215 (239)
T 2ekp_A          148 KTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTL---PLRQNPELYEPIT-ARIP--------MGRWARPEEIARVAA  215 (239)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH---HHHTCHHHHHHHH-TTCT--------TSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhh---ccccCHHHHHHHH-hcCC--------CCCCcCHHHHHHHHH
Confidence            999998887654    35999999999999887421   110  11111111 1111        124788999999999


Q ss_pred             HHhhcC---CCCCeEEecCC
Q 019878          220 AAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       220 ~~~~~~---~~g~~~~i~g~  236 (334)
                      .++...   ..|+++++.|.
T Consensus       216 ~l~s~~~~~~tG~~~~vdgG  235 (239)
T 2ekp_A          216 VLCGDEAEYLTGQAVAVDGG  235 (239)
T ss_dssp             HHTSGGGTTCCSCEEEESTT
T ss_pred             HHcCchhcCCCCCEEEECCC
Confidence            998653   36889999653

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.89  E-value=2.3e-22  Score=172.90  Aligned_cols=200  Identities=16%  Similarity=0.130  Sum_probs=151.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC---CeEEEEEcCCCCCCCCCC----CCCeEEEEcCCCChhhHHHHhc---------
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG---HSVRALVRRTSDISGLPS----EGALELVYGDVTDYRSLVDACF---------   64 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~----~~~v~~~~~Dl~d~~~~~~~~~---------   64 (334)
                      ++||||||+|+||+++++.|+++|   ++|++++|+.+....+.+    ..++.++.+|++|.+++.++++         
T Consensus        22 k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~~  101 (267)
T 1sny_A           22 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQ  101 (267)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred             CEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhcCCC
Confidence            369999999999999999999999   999999998765432211    1368999999999999888876         


Q ss_pred             CCCEEEEeccccC-C------CCCCcccchhhhhHHHHHHHHHHHhcC---------C-----CcEEEEecccceeccCC
Q 019878           65 GCHVIFHTAALVE-P------WLPDPSRFFAVNVEGLKNVVQAAKETK---------T-----VEKIIYTSSFFALGSTD  123 (334)
Q Consensus        65 ~~d~vih~a~~~~-~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~-----~~~~v~~Ss~~v~~~~~  123 (334)
                      ++|+|||+||... .      ..++....+++|+.++.++++++.+..         +     ..++|++||...+....
T Consensus       102 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~  181 (267)
T 1sny_A          102 GLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGN  181 (267)
T ss_dssp             CCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTC
T ss_pred             CccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccccCC
Confidence            7999999999754 1      112345678999999999999987651         1     36899999988775432


Q ss_pred             CccCCCCCccccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccc
Q 019878          124 GYIADENQVHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYI  199 (334)
Q Consensus       124 ~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (334)
                      .           ..+...|+.+|.+.+.+.+.+.    ++|++++++||+.+..+....                     
T Consensus       182 ~-----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---------------------  229 (267)
T 1sny_A          182 T-----------DGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS---------------------  229 (267)
T ss_dssp             C-----------SCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT---------------------
T ss_pred             C-----------CCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC---------------------
Confidence            0           0113679999999999888764    358999999999997653210                     


Q ss_pred             cCCCCceeeeeHHHHHHHHHHHhhcC---CCCCeEEecCCCC
Q 019878          200 GYGNDRFSFCHVDDVVDGHIAAMEKG---RSGERYLLTGENA  238 (334)
Q Consensus       200 ~~~~~~~~~i~v~D~a~a~~~~~~~~---~~g~~~~i~g~~~  238 (334)
                            ..++..+|+++.++.++...   ..|.++++.|..+
T Consensus       230 ------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~  265 (267)
T 1sny_A          230 ------SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTPL  265 (267)
T ss_dssp             ------TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTSCBC
T ss_pred             ------CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccCCcCc
Confidence                  02467899999999998764   2577766655443

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.89  E-value=3e-23  Score=181.74  Aligned_cols=211  Identities=13%  Similarity=0.110  Sum_probs=150.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----------CCCCCeEEEEcCCCChhhHHHHhc------
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----------PSEGALELVYGDVTDYRSLVDACF------   64 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----------~~~~~v~~~~~Dl~d~~~~~~~~~------   64 (334)
                      ++||||||+|+||+++++.|+++|++|++++|+.+....+          ....++.++.+|++|.+++.++++      
T Consensus        19 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   98 (303)
T 1yxm_A           19 QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTF   98 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHHc
Confidence            3699999999999999999999999999999975432100          011368999999999999888775      


Q ss_pred             -CCCEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccc
Q 019878           65 -GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHE  134 (334)
Q Consensus        65 -~~d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~  134 (334)
                       ++|+|||+||....      ..+++...+++|+.++.++++++.+.   ...+++|++||.. +...+           
T Consensus        99 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~-----------  166 (303)
T 1yxm_A           99 GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFP-----------  166 (303)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCT-----------
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCC-----------
Confidence             48999999996321      11234567899999999999998763   1246899999987 32111           


Q ss_pred             cccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCC-CCchhHHHHHHHHHHcCCCCccccCCCCceeee
Q 019878          135 EKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGK-LTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFC  209 (334)
Q Consensus       135 ~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  209 (334)
                         ....|+.+|.+.+.+.+.+.    ++|++++++||+.++|+.. ..........+.... .        ......+.
T Consensus       167 ---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~-~--------~~p~~~~~  234 (303)
T 1yxm_A          167 ---LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSF-Q--------KIPAKRIG  234 (303)
T ss_dssp             ---TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGG-G--------GSTTSSCB
T ss_pred             ---cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHH-h--------cCcccCCC
Confidence               12569999999888887765    3489999999999999842 111110001010000 0        01123478


Q ss_pred             eHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          210 HVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       210 ~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +++|+|++++.++...   ..|+++++.|
T Consensus       235 ~~~dvA~~i~~l~~~~~~~~~G~~~~v~g  263 (303)
T 1yxm_A          235 VPEEVSSVVCFLLSPAASFITGQSVDVDG  263 (303)
T ss_dssp             CTHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CHHHHHHHHHHHhCcccccCCCcEEEECC
Confidence            9999999999998653   3689999964

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.89  E-value=1.1e-22  Score=176.06  Aligned_cols=208  Identities=16%  Similarity=0.137  Sum_probs=149.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCCeEEEEcCCCChhhHHHHhcC-------CCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACFG-------CHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~v~~~~~Dl~d~~~~~~~~~~-------~d~v   69 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+.+....+..     ..++.++.+|++|.+++.+++++       +|+|
T Consensus        36 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l  115 (279)
T 3ctm_A           36 VASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTIDVF  115 (279)
T ss_dssp             EEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCCCEE
Confidence            59999999999999999999999999999998764321110     12688999999999988887754       8999


Q ss_pred             EEeccccCC---C-----CCCcccchhhhhHH----HHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCcccccc
Q 019878           70 FHTAALVEP---W-----LPDPSRFFAVNVEG----LKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        70 ih~a~~~~~---~-----~~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~  137 (334)
                      ||+||....   .     .+++...+++|+.+    ++.+++.+++. +.+++|++||...+....            ..
T Consensus       116 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~~------------~~  182 (279)
T 3ctm_A          116 VANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKN-GKGSLIITSSISGKIVNI------------PQ  182 (279)
T ss_dssp             EECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCCTTSCC---------------C
T ss_pred             EECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCeEEEECchHhccCCC------------CC
Confidence            999997432   1     11234578899999    56777777765 568999999987653310            01


Q ss_pred             ccChHHHHHHHHHHHHHHHhh----cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHH
Q 019878          138 FCTQYERSKAVADKIALQAAS----EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                      +.+.|+.+|.+.|.+.+.+..    ++ ++.+++|+.+.++.......   ........ ..+        ...+++++|
T Consensus       183 ~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~-~~p--------~~~~~~~~d  249 (279)
T 3ctm_A          183 LQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASK---DMKAKWWQ-LTP--------LGREGLTQE  249 (279)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCH---HHHHHHHH-HST--------TCSCBCGGG
T ss_pred             CcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccCh---HHHHHHHH-hCC--------ccCCcCHHH
Confidence            236799999999999888653    47 89999999998875321111   11111111 111        124789999


Q ss_pred             HHHHHHHHhhcC---CCCCeEEecC
Q 019878          214 VVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       214 ~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +|+++..++...   ..|+++++.|
T Consensus       250 vA~~~~~l~s~~~~~~tG~~i~vdg  274 (279)
T 3ctm_A          250 LVGGYLYLASNASTFTTGSDVVIDG  274 (279)
T ss_dssp             THHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHhCccccCccCCEEEECC
Confidence            999999998753   3688999965

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.89  E-value=9.8e-23  Score=174.19  Aligned_cols=207  Identities=22%  Similarity=0.196  Sum_probs=152.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC-CCCCCCCeEEEEcCCCChhhHHHHhc------CCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-GLPSEGALELVYGDVTDYRSLVDACF------GCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~v~~~~~Dl~d~~~~~~~~~------~~d~vih~a~   74 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+... .+.  .++.++.+|++|.+++.++++      ++|++||+||
T Consensus        11 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~nAg   88 (257)
T 3tl3_A           11 VAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADLG--DRARFAAADVTDEAAVASALDLAETMGTLRIVVNCAG   88 (257)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHTC--TTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECGG
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEECCC
Confidence            5999999999999999999999999999999654221 122  368999999999999888775      7999999999


Q ss_pred             ccC----------CCCCCcccchhhhhHHHHHHHHHHHhcC-----------CCcEEEEecccceeccCCCccCCCCCcc
Q 019878           75 LVE----------PWLPDPSRFFAVNVEGLKNVVQAAKETK-----------TVEKIIYTSSFFALGSTDGYIADENQVH  133 (334)
Q Consensus        75 ~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-----------~~~~~v~~Ss~~v~~~~~~~~~~e~~~~  133 (334)
                      ...          ...++++..+++|+.++.++++++....           ...++|++||...+....          
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------  158 (257)
T 3tl3_A           89 TGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQI----------  158 (257)
T ss_dssp             GSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHH----------
T ss_pred             CCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCC----------
Confidence            632          2234467789999999999999998651           234899999987664321          


Q ss_pred             ccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeee
Q 019878          134 EEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFC  209 (334)
Q Consensus       134 ~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  209 (334)
                          ....|+.+|.+.+.+.+.+.    ++|+++..++||.+..+......   .......... .+.       ...+.
T Consensus       159 ----~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~-~~~-------~~r~~  223 (257)
T 3tl3_A          159 ----GQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLP---EEARASLGKQ-VPH-------PSRLG  223 (257)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---C---HHHHHHHHHT-SSS-------SCSCB
T ss_pred             ----CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhcc---HHHHHHHHhc-CCC-------CCCcc
Confidence                13679999998887776643    46899999999999887532211   1111111111 110       13477


Q ss_pred             eHHHHHHHHHHHhhcCC-CCCeEEecC
Q 019878          210 HVDDVVDGHIAAMEKGR-SGERYLLTG  235 (334)
Q Consensus       210 ~v~D~a~a~~~~~~~~~-~g~~~~i~g  235 (334)
                      +++|+|+++..++..+. .|+++++.|
T Consensus       224 ~p~dva~~v~~l~s~~~itG~~i~vdG  250 (257)
T 3tl3_A          224 NPDEYGALAVHIIENPMLNGEVIRLDG  250 (257)
T ss_dssp             CHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             CHHHHHHHHHHHhcCCCCCCCEEEECC
Confidence            89999999999998754 699999964

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.89  E-value=1.9e-22  Score=175.03  Aligned_cols=211  Identities=14%  Similarity=0.079  Sum_probs=151.9

Q ss_pred             cEEEEcCC--ChhhHHHHHHHHhCCCeEEEEEcCCC---CCCCCCC-CCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTS---DISGLPS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~t--G~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+  |+||.++++.|+++|++|++++|+.+   ....+.. .+.+.++.+|++|.+++.++++       ++|+
T Consensus        23 ~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~  102 (285)
T 2p91_A           23 RALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGSLDI  102 (285)
T ss_dssp             EEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCCCE
T ss_pred             EEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            59999999  99999999999999999999999863   1111100 1246789999999998887765       5899


Q ss_pred             EEEeccccCC----------CCCCcccchhhhhHHHHHHHHHHHhcC--CCcEEEEecccceeccCCCccCCCCCccccc
Q 019878           69 IFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (334)
Q Consensus        69 vih~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~  136 (334)
                      |||+||....          ..++++..+++|+.++.++++++.+..  ...++|++||...+...+             
T Consensus       103 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~-------------  169 (285)
T 2p91_A          103 IVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVP-------------  169 (285)
T ss_dssp             EEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCT-------------
T ss_pred             EEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCC-------------
Confidence            9999997431          112345688999999999999998762  126999999977654322             


Q ss_pred             cccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHH
Q 019878          137 YFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVD  212 (334)
Q Consensus       137 ~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  212 (334)
                       ....|+.+|.+.+.+.+.+.    ++|+++.+++||.++++....... ............ +        ...+.+++
T Consensus       170 -~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~-p--------~~~~~~~~  238 (285)
T 2p91_A          170 -HYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITG-FHLLMEHTTKVN-P--------FGKPITIE  238 (285)
T ss_dssp             -TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTT-HHHHHHHHHHHS-T--------TSSCCCHH
T ss_pred             -CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccc-hHHHHHHHHhcC-C--------CCCCcCHH
Confidence             13679999999998887654    358999999999999986432111 122222211111 1        11367899


Q ss_pred             HHHHHHHHHhhcC---CCCCeEEecCC
Q 019878          213 DVVDGHIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       213 D~a~a~~~~~~~~---~~g~~~~i~g~  236 (334)
                      |+|+++..++...   ..|+++++.|.
T Consensus       239 dva~~~~~l~s~~~~~~tG~~~~vdgg  265 (285)
T 2p91_A          239 DVGDTAVFLCSDWARAITGEVVHVDNG  265 (285)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHcCCcccCCCCCEEEECCC
Confidence            9999999998643   25889999653

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.89  E-value=1.8e-23  Score=179.91  Aligned_cols=208  Identities=15%  Similarity=0.151  Sum_probs=151.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+....+.     ...++.++.+|++|.+++.++++       ++|++
T Consensus        30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  109 (270)
T 3ftp_A           30 VAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALNVL  109 (270)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5999999999999999999999999999999865322110     01257889999999998887775       68999


Q ss_pred             EEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        70 ih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      ||+||....      ..++++..+++|+.++.++++++.+.   .+..++|++||...+.....              .+
T Consensus       110 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~  175 (270)
T 3ftp_A          110 VNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPG--------------QV  175 (270)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT--------------BH
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCC--------------ch
Confidence            999997432      12345568899999999999988643   13468999999877643321              36


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHH
Q 019878          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVD  216 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  216 (334)
                      .|+.+|.+.+.+.+.+.    ++|+++.+++||.+.++...   ....... .......        ....+.+++|+|+
T Consensus       176 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~---~~~~~~~-~~~~~~~--------p~~r~~~pedvA~  243 (270)
T 3ftp_A          176 NYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTK---GLPQEQQ-TALKTQI--------PLGRLGSPEDIAH  243 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHH---HSCHHHH-HHHHTTC--------TTCSCBCHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchh---hcCHHHH-HHHHhcC--------CCCCCCCHHHHHH
Confidence            79999998887776654    46899999999999875211   0111111 1111111        2235788999999


Q ss_pred             HHHHHhhcC---CCCCeEEecC
Q 019878          217 GHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       217 a~~~~~~~~---~~g~~~~i~g  235 (334)
                      ++..++...   ..|+++++.|
T Consensus       244 ~v~~L~s~~~~~itG~~i~vdG  265 (270)
T 3ftp_A          244 AVAFLASPQAGYITGTTLHVNG  265 (270)
T ss_dssp             HHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHhCCCcCCccCcEEEECC
Confidence            999988643   3699999964

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.89  E-value=7.2e-23  Score=174.70  Aligned_cols=216  Identities=21%  Similarity=0.187  Sum_probs=156.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+++....+..  ..++.++.+|++|.+++.++++       ++|++||+
T Consensus        10 ~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~n   89 (255)
T 4eso_A           10 KAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHIN   89 (255)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            59999999999999999999999999999998654322111  1268999999999998876654       58999999


Q ss_pred             ccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCccccccccChHHHH
Q 019878           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (334)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (334)
                      ||....      ..++++..+++|+.++.++++++.+.. ...++|++||...+...+.              .+.|+.+
T Consensus        90 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~as  155 (255)
T 4eso_A           90 AGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPG--------------MSVYSAS  155 (255)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTT--------------BHHHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCC--------------chHHHHH
Confidence            997432      223456689999999999999998752 1248999999877654321              3679999


Q ss_pred             HHHHHHHHHHHh----hcCCCEEEEecCceecCCCCC--chhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHH
Q 019878          146 KAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLT--TGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHI  219 (334)
Q Consensus       146 K~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  219 (334)
                      |.+.+.+.+.+.    ++|+++..++||.+.++....  ........+........        ....+.+++|+|++++
T Consensus       156 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~--------p~~r~~~pedvA~~v~  227 (255)
T 4eso_A          156 KAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNIT--------PMKRNGTADEVARAVL  227 (255)
T ss_dssp             HHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHS--------TTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccC--------CCCCCcCHHHHHHHHH
Confidence            999888887754    358999999999999875321  11111111111111111        1224678999999999


Q ss_pred             HHhhcC--CCCCeEEec-CCCCC
Q 019878          220 AAMEKG--RSGERYLLT-GENAS  239 (334)
Q Consensus       220 ~~~~~~--~~g~~~~i~-g~~~s  239 (334)
                      .++...  ..|+++++. |...+
T Consensus       228 ~L~s~~~~itG~~i~vdGG~~~~  250 (255)
T 4eso_A          228 FLAFEATFTTGAKLAVDGGLGQK  250 (255)
T ss_dssp             HHHHTCTTCCSCEEEESTTTTTT
T ss_pred             HHcCcCcCccCCEEEECCCcccc
Confidence            888642  369999996 44444

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.89  E-value=7.2e-23  Score=175.97  Aligned_cols=209  Identities=18%  Similarity=0.119  Sum_probs=150.1

Q ss_pred             cEEEEcCCC-hhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CC--CCCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            2 KILVSGASG-YLGGRLCHALLKQGHSVRALVRRTSDISG----LP--SEGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         2 ~ilItG~tG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~--~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      ++|||||+| .||.++++.|+++|++|++++|+.++...    +.  ...++.++.+|++|.+++.++++       ++|
T Consensus        24 ~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id  103 (266)
T 3o38_A           24 VVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLD  103 (266)
T ss_dssp             EEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             EEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCCCc
Confidence            599999998 59999999999999999999998653211    10  11379999999999998887765       579


Q ss_pred             EEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc----CCCcEEEEecccceeccCCCccCCCCCcccccc
Q 019878           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        68 ~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~  137 (334)
                      +|||+||....      ..++++..+++|+.++.++++++...    ....++|++||...+....              
T Consensus       104 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------------  169 (266)
T 3o38_A          104 VLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQH--------------  169 (266)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCT--------------
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCC--------------
Confidence            99999997432      12234568899999999999998775    2346899999987664322              


Q ss_pred             ccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHH
Q 019878          138 FCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                      +.+.|+.+|.+.+.+.+.+.    .+|+++..++|+.+.++......  ......         ..........+.+++|
T Consensus       170 ~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~---------~~~~~~~~~r~~~~~d  238 (266)
T 3o38_A          170 SQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTS--SSELLD---------RLASDEAFGRAAEPWE  238 (266)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC----------------------------CCTTSSCCCHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccC--cHHHHH---------HHHhcCCcCCCCCHHH
Confidence            13679999999998887654    35899999999999876421110  001111         1111223346789999


Q ss_pred             HHHHHHHHhhcC---CCCCeEEecC
Q 019878          214 VVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       214 ~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +|+++..++...   -.|+++++.|
T Consensus       239 va~~i~~l~s~~~~~~tG~~i~vdg  263 (266)
T 3o38_A          239 VAATIAFLASDYSSYMTGEVVSVSS  263 (266)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             HHHHHHHHcCccccCccCCEEEEcC
Confidence            999999998753   3699999964

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.89  E-value=3.5e-23  Score=180.53  Aligned_cols=221  Identities=15%  Similarity=0.136  Sum_probs=156.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC----C-CC---CeEEEEcCCCChhhHHHHhc-------CC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S-EG---ALELVYGDVTDYRSLVDACF-------GC   66 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~-~~---~v~~~~~Dl~d~~~~~~~~~-------~~   66 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.++...+.    . ..   ++.++.+|++|.+++.++++       ++
T Consensus        28 ~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  107 (297)
T 1xhl_A           28 SVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKI  107 (297)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence            5999999999999999999999999999999864322110    0 01   58899999999998887765       68


Q ss_pred             CEEEEeccccCCC--------CCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccc
Q 019878           67 HVIFHTAALVEPW--------LPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEE  135 (334)
Q Consensus        67 d~vih~a~~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~  135 (334)
                      |+|||+||.....        .++++..+++|+.++.++++++.+.   .+ +++|++||...+....            
T Consensus       108 D~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~------------  174 (297)
T 1xhl_A          108 DILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAH------------  174 (297)
T ss_dssp             CEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCC------------
T ss_pred             CEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCC------------
Confidence            9999999974321        1234568899999999999998764   23 6999999987765320            


Q ss_pred             ccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCc--hhH----HHHHHHHHHcCCCCccccCCCCc
Q 019878          136 KYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTT--GNL----VAKLMIERFNGRLPGYIGYGNDR  205 (334)
Q Consensus       136 ~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~  205 (334)
                       ++...|+.+|.+.+.+.+.+.    ++|+++++++|+.+.++.....  ...    ..... .......        ..
T Consensus       175 -~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~~~~~~--------p~  244 (297)
T 1xhl_A          175 -SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFI-GSRKECI--------PV  244 (297)
T ss_dssp             -TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHH-HHCTTTC--------TT
T ss_pred             -CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHH-HHHHhcC--------CC
Confidence             013679999999988877654    4699999999999988631100  000    00111 1111111        12


Q ss_pred             eeeeeHHHHHHHHHHHhhcC----CCCCeEEec-CCCCCHHHHHH
Q 019878          206 FSFCHVDDVVDGHIAAMEKG----RSGERYLLT-GENASFMQIFD  245 (334)
Q Consensus       206 ~~~i~v~D~a~a~~~~~~~~----~~g~~~~i~-g~~~s~~e~~~  245 (334)
                      ..+..++|+|+++..++..+    ..|+++++. |..+.+.+.+.
T Consensus       245 ~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~  289 (297)
T 1xhl_A          245 GHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTH  289 (297)
T ss_dssp             SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGS
T ss_pred             CCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCcccccccccc
Confidence            34789999999999998653    469999996 44455444433

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.89  E-value=2.8e-23  Score=179.31  Aligned_cols=212  Identities=18%  Similarity=0.181  Sum_probs=150.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+....+..  ..++.++.+|++|.+++.++++       ++|++||+
T Consensus        31 ~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnn  110 (277)
T 3gvc_A           31 VAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVAN  110 (277)
T ss_dssp             EEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            59999999999999999999999999999998653221100  1268899999999998877765       68999999


Q ss_pred             ccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChHH
Q 019878           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (334)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (334)
                      ||....      ..++++..+++|+.++.++++++.+.   .+..++|++||...+.....              .+.|+
T Consensus       111 Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~--------------~~~Y~  176 (277)
T 3gvc_A          111 AGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGG--------------TGAYG  176 (277)
T ss_dssp             CCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT--------------BHHHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCC--------------chhHH
Confidence            997432      22345668899999999999988653   24568999999876543221              36799


Q ss_pred             HHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccC---CCCceeeeeHHHHHH
Q 019878          144 RSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGY---GNDRFSFCHVDDVVD  216 (334)
Q Consensus       144 ~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~v~D~a~  216 (334)
                      .+|.+.+.+.+.+.    ++|+++.+++||.++++..       ..... ...+........   ......+.+++|+|+
T Consensus       177 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~-------~~~~~-~~~~~~~~~~~~~~~~~~~~r~~~pedvA~  248 (277)
T 3gvc_A          177 MSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQ-------QTAMA-MFDGALGAGGARSMIARLQGRMAAPEEMAG  248 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH-------HHHHT-CC------CCHHHHHHHHHSSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchH-------HHhhh-cchhhHHHHhhhhhhhccccCCCCHHHHHH
Confidence            99999888877654    4689999999999987621       00000 000000000000   001234788999999


Q ss_pred             HHHHHhhcC---CCCCeEEecC
Q 019878          217 GHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       217 a~~~~~~~~---~~g~~~~i~g  235 (334)
                      ++..++...   -.|+++++.|
T Consensus       249 ~v~~L~s~~a~~itG~~i~vdG  270 (277)
T 3gvc_A          249 IVVFLLSDDASMITGTTQIADG  270 (277)
T ss_dssp             HHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHcCCccCCccCcEEEECC
Confidence            999998653   3699999964

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.88  E-value=5.5e-23  Score=176.41  Aligned_cols=208  Identities=16%  Similarity=0.182  Sum_probs=146.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+.++...+..  ..++.++.+|++|.+++.++++       ++|+|||+
T Consensus        29 ~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnn  108 (266)
T 3grp_A           29 KALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNN  108 (266)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEEEEC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            59999999999999999999999999999997654322110  1268999999999998887775       68999999


Q ss_pred             ccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChHH
Q 019878           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (334)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (334)
                      ||....      ..++++..+++|+.++.++.+++.+.   .+..++|++||...+....              ..+.|+
T Consensus       109 Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~--------------~~~~Y~  174 (266)
T 3grp_A          109 AGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNP--------------GQTNYC  174 (266)
T ss_dssp             CCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC---------------------CHHHHH
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCC--------------CchhHH
Confidence            997432      12345668899999977777666432   1457999999987664322              136799


Q ss_pred             HHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHH
Q 019878          144 RSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHI  219 (334)
Q Consensus       144 ~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  219 (334)
                      .+|.+.+.+.+.+.    ++|+++..++||.+.++......   .......... .        ....+.+++|+|+++.
T Consensus       175 asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~---~~~~~~~~~~-~--------p~~r~~~~edvA~~v~  242 (266)
T 3grp_A          175 AAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLN---EKQKEAIMAM-I--------PMKRMGIGEEIAFATV  242 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCC---HHHHHHHHTT-C--------TTCSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccC---HHHHHHHHhc-C--------CCCCCcCHHHHHHHHH
Confidence            99998887776654    45899999999999876321111   1111222222 1        2235778999999999


Q ss_pred             HHhhcC---CCCCeEEecC
Q 019878          220 AAMEKG---RSGERYLLTG  235 (334)
Q Consensus       220 ~~~~~~---~~g~~~~i~g  235 (334)
                      .++...   -.|+++++.|
T Consensus       243 ~L~s~~~~~itG~~i~vdG  261 (266)
T 3grp_A          243 YLASDEAAYLTGQTLHING  261 (266)
T ss_dssp             HHHSGGGTTCCSCEEEEST
T ss_pred             HHhCccccCccCCEEEECC
Confidence            998754   3699999965

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.88  E-value=3.8e-23  Score=177.44  Aligned_cols=208  Identities=16%  Similarity=0.180  Sum_probs=152.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+....+.     ...++.++.+|++|.+++.++++       ++|++
T Consensus        13 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   92 (264)
T 3ucx_A           13 VVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVDVV   92 (264)
T ss_dssp             EEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCCSEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence            5999999999999999999999999999999765322110     01368999999999998887775       58999


Q ss_pred             EEeccccCC-------CCCCcccchhhhhHHHHHHHHHHHhcC--CCcEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           70 FHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        70 ih~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      ||+||....       ..+++...+++|+.++.++++++....  ...++|++||...+.....              ..
T Consensus        93 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~  158 (264)
T 3ucx_A           93 INNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQAK--------------YG  158 (264)
T ss_dssp             EECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCCTT--------------CH
T ss_pred             EECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCCCc--------------cH
Confidence            999986421       122345678999999999999876431  1159999999876643321              36


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHH-----------HHHHHHHHcCCCCccccCCCCc
Q 019878          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLV-----------AKLMIERFNGRLPGYIGYGNDR  205 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~  205 (334)
                      .|+.+|.+.+.+.+.+.    ++|+++..++||.++++..   ...+           ........         .....
T Consensus       159 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~---~~~~~~~~~~~~~~~~~~~~~~~---------~~~p~  226 (264)
T 3ucx_A          159 AYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTL---KSYFEHQAGKYGTSVEDIYNAAA---------AGSDL  226 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHH---HHHHHHHHHHTTCCHHHHHHHHH---------TTSSS
T ss_pred             HHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccH---HHHHHhhhhhcCCCHHHHHHHHh---------ccCCc
Confidence            79999999888877654    4689999999999988632   1111           11111111         12233


Q ss_pred             eeeeeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          206 FSFCHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       206 ~~~i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      ..+.+++|+|+++..++...   ..|+++++.|
T Consensus       227 ~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG  259 (264)
T 3ucx_A          227 KRLPTEDEVASAILFMASDLASGITGQALDVNC  259 (264)
T ss_dssp             SSCCBHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             ccCCCHHHHHHHHHHHcCccccCCCCCEEEECC
Confidence            45789999999999998653   3699999964

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.88  E-value=4.8e-22  Score=169.26  Aligned_cols=195  Identities=14%  Similarity=0.098  Sum_probs=149.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~a~   74 (334)
                      +||||||+|+||.++++.|+++|++|++++|+..+..       ...+.+|++|.+++.++++       ++|+|||+||
T Consensus        24 ~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~-------~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag   96 (251)
T 3orf_A           24 NILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA-------DHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAG   96 (251)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS-------SEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-------ccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence            5999999999999999999999999999999986542       2457889999998877764       3699999999


Q ss_pred             ccCC-------CCCCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEecccceeccCCCccCCCCCccccccccChHHHHH
Q 019878           75 LVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (334)
Q Consensus        75 ~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK  146 (334)
                      ....       ..+++...+++|+.++.++++++.+... -.++|++||...+.+..              ....|+.+|
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~--------------~~~~Y~~sK  162 (251)
T 3orf_A           97 GWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTS--------------GMIAYGATK  162 (251)
T ss_dssp             CCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT--------------TBHHHHHHH
T ss_pred             cCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCC--------------CCchhHHHH
Confidence            7432       1223456889999999999999987521 13899999987764322              136799999


Q ss_pred             HHHHHHHHHHhh------cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHH
Q 019878          147 AVADKIALQAAS------EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIA  220 (334)
Q Consensus       147 ~~~E~~~~~~~~------~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~  220 (334)
                      .+.+.+.+.+..      +|+++.+++||.+.++.           ......         ......+++++|+|+++..
T Consensus       163 aa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~-----------~~~~~~---------~~~~~~~~~~~dva~~i~~  222 (251)
T 3orf_A          163 AATHHIIKDLASENGGLPAGSTSLGILPVTLDTPT-----------NRKYMS---------DANFDDWTPLSEVAEKLFE  222 (251)
T ss_dssp             HHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHH-----------HHHHCT---------TSCGGGSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcc-----------hhhhcc---------cccccccCCHHHHHHHHHH
Confidence            999999988652      47999999999997641           111111         1234468899999999999


Q ss_pred             Hhhc-C---CCCCeEEec-CCC
Q 019878          221 AMEK-G---RSGERYLLT-GEN  237 (334)
Q Consensus       221 ~~~~-~---~~g~~~~i~-g~~  237 (334)
                      ++.. .   ..|+++++. |+.
T Consensus       223 l~~~~~~~~~tG~~i~v~~g~~  244 (251)
T 3orf_A          223 WSTNSDSRPTNGSLVKFETKSK  244 (251)
T ss_dssp             HHHCGGGCCCTTCEEEEEEETT
T ss_pred             HhcCccccCCcceEEEEecCCc
Confidence            9987 2   268899985 443

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.88  E-value=9.1e-23  Score=175.43  Aligned_cols=205  Identities=20%  Similarity=0.187  Sum_probs=150.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCC-CCCCC----C-CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~----~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.. ..+.+    . ...++.++.+|++|.+++.++++       ++|+
T Consensus        30 ~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~id~  109 (269)
T 4dmm_A           30 IALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRLDV  109 (269)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4999999999999999999999999999988532 11110    0 01268899999999998887775       6899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      |||+||....      ..++++..+++|+.++.++++++.+.   .+..++|++||...+.....              .
T Consensus       110 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  175 (269)
T 4dmm_A          110 LVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPG--------------Q  175 (269)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTT--------------C
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCC--------------c
Confidence            9999997432      22345668899999999999988543   13569999999876643321              3


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      ..|+.+|.+.+.+.+.+.    ++|+++.+++||.+.++...   ....    .......        ....+.+++|+|
T Consensus       176 ~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~---~~~~----~~~~~~~--------p~~r~~~~~dvA  240 (269)
T 4dmm_A          176 ANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTS---ELAA----EKLLEVI--------PLGRYGEAAEVA  240 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSC---HHHH----HHHGGGC--------TTSSCBCHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccc---cccH----HHHHhcC--------CCCCCCCHHHHH
Confidence            679999998877766644    46999999999999987532   1111    1111111        123477899999


Q ss_pred             HHHHHHhhcC----CCCCeEEecC
Q 019878          216 DGHIAAMEKG----RSGERYLLTG  235 (334)
Q Consensus       216 ~a~~~~~~~~----~~g~~~~i~g  235 (334)
                      +++..++..+    ..|+++++.|
T Consensus       241 ~~v~~l~s~~~~~~itG~~i~vdG  264 (269)
T 4dmm_A          241 GVVRFLAADPAAAYITGQVINIDG  264 (269)
T ss_dssp             HHHHHHHHCGGGGGCCSCEEEEST
T ss_pred             HHHHHHhCCcccCCCcCCEEEECC
Confidence            9999999763    3599999964

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.88  E-value=1e-21  Score=167.92  Aligned_cols=216  Identities=19%  Similarity=0.181  Sum_probs=152.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC--CCC----CC-CCCCeEEEEcCCCChhhHHHHhc-------CC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD--ISG----LP-SEGALELVYGDVTDYRSLVDACF-------GC   66 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~----~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~   66 (334)
                      +++|||||+|+||.++++.|+++|++|++++|+.+.  ...    +. ...++.++.+|++|.+++.++++       ++
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   82 (258)
T 3a28_C            3 KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGGF   82 (258)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            369999999999999999999999999999998654  211    10 01368899999999998887775       69


Q ss_pred             CEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCC-cEEEEecccceeccCCCccCCCCCccccc
Q 019878           67 HVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTV-EKIIYTSSFFALGSTDGYIADENQVHEEK  136 (334)
Q Consensus        67 d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~-~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~  136 (334)
                      |+|||+||....      ..+++...+++|+.++.++++++.+.   .+. +++|++||...+...+             
T Consensus        83 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------------  149 (258)
T 3a28_C           83 DVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFP-------------  149 (258)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCT-------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCC-------------
Confidence            999999997432      12245568899999999999998764   134 7999999987664322             


Q ss_pred             cccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCC-Cc---cccCCCCceee
Q 019878          137 YFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRL-PG---YIGYGNDRFSF  208 (334)
Q Consensus       137 ~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~  208 (334)
                       +...|+.+|.+.+.+.+.+.    ++|+++.+++||.+.++..   ...... +... .+.. ..   .+........+
T Consensus       150 -~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~---~~~~~~-~~~~-~~~~~~~~~~~~~~~~p~~r~  223 (258)
T 3a28_C          150 -ILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMW---EQIDAE-LSKI-NGKPIGENFKEYSSSIALGRP  223 (258)
T ss_dssp             -TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHH---HHHHHH-HHHH-HCCCTTHHHHHHHTTCTTSSC
T ss_pred             -CchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhh---hhhhhh-hccc-cCCchHHHHHHHHhcCCCCCc
Confidence             13679999999988877654    4589999999999976521   010100 0000 0000 00   00001112347


Q ss_pred             eeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          209 CHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       209 i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      .+++|+|+++..++...   ..|+++++.|
T Consensus       224 ~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG  253 (258)
T 3a28_C          224 SVPEDVAGLVSFLASENSNYVTGQVMLVDG  253 (258)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             cCHHHHHHHHHHHhCcccCCCCCCEEEECC
Confidence            89999999999998754   3688999964

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.88  E-value=8.7e-23  Score=176.52  Aligned_cols=212  Identities=14%  Similarity=0.091  Sum_probs=152.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CC-CCCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+....    +. ...++.++.+|++|.+++.++++       ++|+|
T Consensus        26 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~l  105 (279)
T 3sju_A           26 TAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGIL  105 (279)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence            59999999999999999999999999999998653221    10 11368999999999998877765       58999


Q ss_pred             EEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc-----CCCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET-----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        70 ih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      ||+||....      ..++++..+++|+.++.++++++.+.     .+..++|++||...+.....              
T Consensus       106 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~--------------  171 (279)
T 3sju_A          106 VNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMY--------------  171 (279)
T ss_dssp             EECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTT--------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCC--------------
Confidence            999997432      11234567889999999999998661     14569999999877643221              


Q ss_pred             cChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCch-------h-HHHHHHHHHHcCCCCccccCCCCce
Q 019878          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTG-------N-LVAKLMIERFNGRLPGYIGYGNDRF  206 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~  206 (334)
                      ...|+.+|.+.+.+.+.+.    ++|+++..++||.+.++......       . .......... ..        ....
T Consensus       172 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--------~p~~  242 (279)
T 3sju_A          172 AAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFN-AK--------IPLG  242 (279)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHH-TT--------CTTS
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHH-hc--------CCCC
Confidence            3679999998888777654    45899999999999875210000       0 0011111111 11        1233


Q ss_pred             eeeeHHHHHHHHHHHhhcC---CCCCeEEecCC
Q 019878          207 SFCHVDDVVDGHIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       207 ~~i~v~D~a~a~~~~~~~~---~~g~~~~i~g~  236 (334)
                      .+..++|+|+++..++...   ..|+++++.|.
T Consensus       243 r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG  275 (279)
T 3sju_A          243 RYSTPEEVAGLVGYLVTDAAASITAQALNVCGG  275 (279)
T ss_dssp             SCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTT
T ss_pred             CCCCHHHHHHHHHHHhCccccCcCCcEEEECCC
Confidence            5788999999999998754   36999999653

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.88  E-value=1.8e-22  Score=172.39  Aligned_cols=216  Identities=21%  Similarity=0.199  Sum_probs=150.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||+|+||.++++.|+++|++|++++|++++...+.     ...++.++.+|++|.+++.++++       ++|+|
T Consensus         4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   83 (256)
T 1geg_A            4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVI   83 (256)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            5999999999999999999999999999999864322110     01258899999999999888776       69999


Q ss_pred             EEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC---C-CcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---T-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        70 ih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      ||+||....      ..++++..+++|+.++.++++++.+..   + ..++|++||...+...+              ..
T Consensus        84 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------~~  149 (256)
T 1geg_A           84 VNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNP--------------EL  149 (256)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT--------------TB
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCC--------------Cc
Confidence            999997432      112345688999999998888876541   2 46999999976654321              13


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCC---ccccCCCCceeeeeHH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLP---GYIGYGNDRFSFCHVD  212 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~v~  212 (334)
                      ..|+.+|.+.+.+.+.+.    ++|+++++++||.+.++..   ...... +.........   ..+........+.+++
T Consensus       150 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~r~~~p~  225 (256)
T 1geg_A          150 AVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMW---AEIDRQ-VSEAAGKPLGYGTAEFAKRITLGRLSEPE  225 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHH---HHHHHH-HHHHHTCCTTHHHHHHHTTCTTCSCBCHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchh---hhhhhh-ccccccCChHHHHHHHHhcCCCCCCcCHH
Confidence            679999998888877654    4589999999999987631   111000 0000000000   0000011123478999


Q ss_pred             HHHHHHHHHhhcC---CCCCeEEecC
Q 019878          213 DVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       213 D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      |+|+++..++..+   ..|+++++.|
T Consensus       226 dvA~~v~~l~s~~~~~~tG~~i~vdG  251 (256)
T 1geg_A          226 DVAACVSYLASPDSDYMTGQSLLIDG  251 (256)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             HHHHHHHHHhCccccCCCCCEEEeCC
Confidence            9999999998754   3688999964

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.88  E-value=7.9e-23  Score=176.73  Aligned_cols=211  Identities=17%  Similarity=0.184  Sum_probs=153.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CC-CCCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+....    +. ...++.++.+|++|.+++.++++       ++|++
T Consensus        10 ~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   89 (280)
T 3tox_A           10 IAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGLDTA   89 (280)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            49999999999999999999999999999998643211    11 11368999999999998887775       68999


Q ss_pred             EEeccccCC-------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceec-cCCCccCCCCCccccccc
Q 019878           70 FHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALG-STDGYIADENQVHEEKYF  138 (334)
Q Consensus        70 ih~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~-~~~~~~~~e~~~~~~~~~  138 (334)
                      ||+||....       ..++++..+++|+.++.++++++...   .+..++|++||...+. ...              .
T Consensus        90 vnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  155 (280)
T 3tox_A           90 FNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFA--------------G  155 (280)
T ss_dssp             EECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCT--------------T
T ss_pred             EECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCC--------------C
Confidence            999996421       22345668899999999999988654   2346999999987662 211              1


Q ss_pred             cChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCC-chhHHHHHHHHHHcCCCCccccCCCCceeeeeHHH
Q 019878          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLT-TGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                      .+.|+.+|.+.+.+.+.+.    ++|+++..++||.+.++.... ......... .......        ....+..++|
T Consensus       156 ~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~-~~~~~~~--------p~~r~~~ped  226 (280)
T 3tox_A          156 VAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETR-GFVEGLH--------ALKRIARPEE  226 (280)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHH-HHHHTTS--------TTSSCBCHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHH-HHHhccC--------ccCCCcCHHH
Confidence            3679999999888877654    458999999999999875321 000001111 1111221        2234788999


Q ss_pred             HHHHHHHHhhcC---CCCCeEEecC
Q 019878          214 VVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       214 ~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +|++++.++...   -.|+++++.|
T Consensus       227 vA~~v~~L~s~~a~~itG~~i~vdG  251 (280)
T 3tox_A          227 IAEAALYLASDGASFVTGAALLADG  251 (280)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHhCccccCCcCcEEEECC
Confidence            999999998754   3699999964

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.88  E-value=2.1e-22  Score=173.75  Aligned_cols=210  Identities=19%  Similarity=0.154  Sum_probs=153.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      +++|||||+|+||.++++.|+++|++|++++|+.+....+.     ...++.++.+|++|.+++.++++       ++|+
T Consensus        33 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~  112 (276)
T 3r1i_A           33 KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGIDI  112 (276)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            36999999999999999999999999999999876432211     01268899999999999888776       6899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc----CCCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      +||+||....      ..++++..+++|+.++.++++++.+.    +...++|++||...+.....            .+
T Consensus       113 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~------------~~  180 (276)
T 3r1i_A          113 AVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIP------------QQ  180 (276)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCS------------SC
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCC------------CC
Confidence            9999997432      12234567789999999999988654    11358999999776532211            01


Q ss_pred             cChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      .+.|+.+|.+.+.+.+.+.    ++|+++..++||.|..+.......    ..... ....        ....+..++|+
T Consensus       181 ~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~----~~~~~-~~~~--------p~~r~~~pedv  247 (276)
T 3r1i_A          181 VSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLAD----YHALW-EPKI--------PLGRMGRPEEL  247 (276)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGG----GHHHH-GGGS--------TTSSCBCGGGS
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchH----HHHHH-HhcC--------CCCCCcCHHHH
Confidence            3679999999988887754    458999999999999875422111    11111 1111        12347789999


Q ss_pred             HHHHHHHhhcC---CCCCeEEecC
Q 019878          215 VDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       215 a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      |+++..++...   -.|+++++.|
T Consensus       248 A~~v~fL~s~~~~~itG~~i~vdG  271 (276)
T 3r1i_A          248 TGLYLYLASAASSYMTGSDIVIDG  271 (276)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHcCccccCccCcEEEECc
Confidence            99999998753   3699999965

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.88  E-value=4.8e-22  Score=173.12  Aligned_cols=210  Identities=20%  Similarity=0.140  Sum_probs=152.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC--CCCC----C-CCCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD--ISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~----~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+...  ...+    . ...++.++.+|++|.+++.++++       ++|
T Consensus        51 ~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  130 (294)
T 3r3s_A           51 KALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALGGLD  130 (294)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHTCCC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            59999999999999999999999999999887321  1000    0 01368899999999998877764       589


Q ss_pred             EEEEeccccCC-------CCCCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           68 VIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        68 ~vih~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      ++||+||....       ..++++..+++|+.++.++++++..... ..++|++||...+.....              .
T Consensus       131 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~--------------~  196 (294)
T 3r3s_A          131 ILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPH--------------L  196 (294)
T ss_dssp             EEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCTT--------------C
T ss_pred             EEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCCC--------------c
Confidence            99999997431       1223466889999999999999988731 239999999888764332              3


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      ..|+.+|.+.+.+.+.+.    ++|+++..++||.|+++......          ........+........+..++|+|
T Consensus       197 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~----------~~~~~~~~~~~~~p~~r~~~p~dvA  266 (294)
T 3r3s_A          197 LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGG----------QTQDKIPQFGQQTPMKRAGQPAELA  266 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTT----------SCGGGSTTTTTTSTTSSCBCGGGGH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccC----------CCHHHHHHHHhcCCCCCCcCHHHHH
Confidence            669999999888877654    45999999999999876310000          0000011111222334578899999


Q ss_pred             HHHHHHhhcC---CCCCeEEecC
Q 019878          216 DGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       216 ~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +++..++...   -.|+++++.|
T Consensus       267 ~~v~~L~s~~~~~itG~~i~vdG  289 (294)
T 3r3s_A          267 PVYVYLASQESSYVTAEVHGVCG  289 (294)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHhCccccCCCCCEEEECC
Confidence            9999998653   3699999964

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.88  E-value=8.3e-23  Score=176.79  Aligned_cols=200  Identities=21%  Similarity=0.232  Sum_probs=140.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-------CCCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-------SEGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+..+...+.       ....+.++.+|++|.+++.++++       ++|
T Consensus        34 ~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD  113 (279)
T 1xg5_A           34 LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVD  113 (279)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCCS
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCCCCC
Confidence            5999999999999999999999999999999754322110       01257889999999998887775       699


Q ss_pred             EEEEeccccCC------CCCCcccchhhhhHH----HHHHHHHHHhcCCC--cEEEEecccceeccCCCccCCCCCcccc
Q 019878           68 VIFHTAALVEP------WLPDPSRFFAVNVEG----LKNVVQAAKETKTV--EKIIYTSSFFALGSTDGYIADENQVHEE  135 (334)
Q Consensus        68 ~vih~a~~~~~------~~~~~~~~~~~n~~~----~~~l~~~~~~~~~~--~~~v~~Ss~~v~~~~~~~~~~e~~~~~~  135 (334)
                      +|||+||....      ..+++...+++|+.+    ++.++..+++. +.  +++|++||...+...+            
T Consensus       114 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~-~~~~g~iv~isS~~~~~~~~------------  180 (279)
T 1xg5_A          114 ICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKER-NVDDGHIININSMSGHRVLP------------  180 (279)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCCSCEEEEECCGGGTSCCS------------
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCCceEEEEcChhhcccCC------------
Confidence            99999997432      112345688999999    77777777776 44  7999999988764211            


Q ss_pred             ccccChHHHHHHHHHHHHHHHh------hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeee
Q 019878          136 KYFCTQYERSKAVADKIALQAA------SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFC  209 (334)
Q Consensus       136 ~~~~~~Y~~sK~~~E~~~~~~~------~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  209 (334)
                      ..+.+.|+.+|.+.+.+.+.+.      ..|+++++++|+.+.++..       ..    .......... .......++
T Consensus       181 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~-------~~----~~~~~~~~~~-~~~~~~~~~  248 (279)
T 1xg5_A          181 LSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFA-------FK----LHDKDPEKAA-ATYEQMKCL  248 (279)
T ss_dssp             CGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHH-------HH----HTTTCHHHHH-HHHC---CB
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhh-------hh----hcccChhHHh-hhcccccCC
Confidence            1123679999999888776543      4589999999999987631       00    0000000000 000112478


Q ss_pred             eHHHHHHHHHHHhhcCC
Q 019878          210 HVDDVVDGHIAAMEKGR  226 (334)
Q Consensus       210 ~v~D~a~a~~~~~~~~~  226 (334)
                      +++|+|++++.++..+.
T Consensus       249 ~~~dvA~~i~~l~~~~~  265 (279)
T 1xg5_A          249 KPEDVAEAVIYVLSTPA  265 (279)
T ss_dssp             CHHHHHHHHHHHHHSCT
T ss_pred             CHHHHHHHHHHHhcCCc
Confidence            89999999999998654

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.88  E-value=5.5e-22  Score=171.18  Aligned_cols=209  Identities=15%  Similarity=0.172  Sum_probs=150.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vi   70 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+++....    +...+++.++.+|++|.+++.++++       ++|+||
T Consensus        31 ~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv  110 (276)
T 2b4q_A           31 IALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLDILV  110 (276)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCSEEE
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            59999999999999999999999999999997643211    1111268889999999998887765       589999


Q ss_pred             EeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCC----cEEEEecccceeccCCCccCCCCCcccccc
Q 019878           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTV----EKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        71 h~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~----~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~  137 (334)
                      |+||....      ..++++..+++|+.++.++++++.+.   .+.    +++|++||...+.....             
T Consensus       111 nnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~-------------  177 (276)
T 2b4q_A          111 NNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGE-------------  177 (276)
T ss_dssp             ECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCC-------------
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCC-------------
Confidence            99997432      12234568899999998888877542   123    79999999877654321             


Q ss_pred             ccC-hHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHc-CCCCccccCCCCceeeeeH
Q 019878          138 FCT-QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFN-GRLPGYIGYGNDRFSFCHV  211 (334)
Q Consensus       138 ~~~-~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v  211 (334)
                       .. .|+.+|.+.+.+.+.+.    ++|+++.+++|+.+.++..   ............. ...+        ...+.++
T Consensus       178 -~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~---~~~~~~~~~~~~~~~~~p--------~~r~~~p  245 (276)
T 2b4q_A          178 -QAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMT---RHIANDPQALEADSASIP--------MGRWGRP  245 (276)
T ss_dssp             -SCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTT---HHHHHCHHHHHHHHHTST--------TSSCCCH
T ss_pred             -CccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcch---hhcchhHHHHHHhhcCCC--------CCCcCCH
Confidence             13 69999999998887754    4589999999999988742   1111111111111 0111        1247889


Q ss_pred             HHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          212 DDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       212 ~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +|+|+++..++..+   ..|+++++.|
T Consensus       246 ~dvA~~v~~l~s~~~~~~tG~~i~vdG  272 (276)
T 2b4q_A          246 EEMAALAISLAGTAGAYMTGNVIPIDG  272 (276)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHhCccccCCCCCEEEeCC
Confidence            99999999998754   3688999964

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.88  E-value=4.3e-22  Score=168.04  Aligned_cols=195  Identities=16%  Similarity=0.141  Sum_probs=146.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc---------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF---------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---------~~d~vih~   72 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+++....     ...++.+|++|.+++.++++         ++|+|||+
T Consensus         5 ~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~~   79 (236)
T 1ooe_A            5 KVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD-----SNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCV   79 (236)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS-----EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEecCcccccc-----ccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEEC
Confidence            59999999999999999999999999999998765331     46788999999988877664         68999999


Q ss_pred             ccccCC-------CCCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCccccccccChHHH
Q 019878           73 AALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (334)
Q Consensus        73 a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (334)
                      ||....       ..++++..+++|+.++.++++++.+.. ...++|++||...+.+.+              +...|+.
T Consensus        80 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~--------------~~~~Y~~  145 (236)
T 1ooe_A           80 AGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTP--------------SMIGYGM  145 (236)
T ss_dssp             CCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT--------------TBHHHHH
T ss_pred             CcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCC--------------CcHHHHH
Confidence            997432       112345678999999999999998752 124899999987764321              1367999


Q ss_pred             HHHHHHHHHHHHh------hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHH
Q 019878          145 SKAVADKIALQAA------SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGH  218 (334)
Q Consensus       145 sK~~~E~~~~~~~------~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  218 (334)
                      +|.+.+.+.+.+.      ++|+++++++|+.+.++.           ..... ..        .....++..+|+|+++
T Consensus       146 sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~-----------~~~~~-~~--------~~~~~~~~~~dvA~~i  205 (236)
T 1ooe_A          146 AKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM-----------NRKWM-PN--------ADHSSWTPLSFISEHL  205 (236)
T ss_dssp             HHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH-----------HHHHS-TT--------CCGGGCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcc-----------hhhcC-CC--------ccccccCCHHHHHHHH
Confidence            9999999988865      236999999999997651           11111 11        1123467889999999


Q ss_pred             HHHhhcC----CCCCeEEecC
Q 019878          219 IAAMEKG----RSGERYLLTG  235 (334)
Q Consensus       219 ~~~~~~~----~~g~~~~i~g  235 (334)
                      ..++.++    ..|+++++.|
T Consensus       206 ~~~l~s~~~~~~~G~~~~v~g  226 (236)
T 1ooe_A          206 LKWTTETSSRPSSGALLKITT  226 (236)
T ss_dssp             HHHHHCGGGCCCTTCEEEEEE
T ss_pred             HHHHcCCCcccccccEEEEec
Confidence            8666322    3588888853

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.88  E-value=1.2e-22  Score=177.56  Aligned_cols=214  Identities=19%  Similarity=0.151  Sum_probs=145.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+....+.     ...++.++.+|++|.+++.++++       ++|+|
T Consensus        33 ~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~l  112 (301)
T 3tjr_A           33 AAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDVV  112 (301)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCSEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            5999999999999999999999999999999865432110     01268999999999999887775       68999


Q ss_pred             EEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc----CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        70 ih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      ||+||....      ..+++...+++|+.++.++++++...    +...++|++||...+.+...              .
T Consensus       113 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  178 (301)
T 3tjr_A          113 FSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAG--------------L  178 (301)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTT--------------B
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCC--------------c
Confidence            999997432      22344568899999999999997553    22469999999877643321              3


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHH--HHHHHcCCCCccccCCCCceeeeeHHH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKL--MIERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                      +.|+.||.+.+.+.+.+.    +.|+++.+++||.+..+..    .-....  ........+...++.......+++++|
T Consensus       179 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ped  254 (301)
T 3tjr_A          179 GTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLV----SNSERIRGADYGMSATPEGAFGPLPTQDESVSADD  254 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHH----HHHHHHC----------------------CCCHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccc----cccccccchhhccccChhhhccccccccCCCCHHH
Confidence            679999998887777654    4589999999999976521    000000  000001111112222334457899999


Q ss_pred             HHHHHHHHhhcCCCCCeEEecCC
Q 019878          214 VVDGHIAAMEKGRSGERYLLTGE  236 (334)
Q Consensus       214 ~a~a~~~~~~~~~~g~~~~i~g~  236 (334)
                      +|++++.+++.+.   .+.+.|.
T Consensus       255 vA~~i~~~l~~~~---~~i~~g~  274 (301)
T 3tjr_A          255 VARLTADAILANR---LYILPHA  274 (301)
T ss_dssp             HHHHHHHHHHHTC---SEECCCT
T ss_pred             HHHHHHHHHhcCC---eEEecCH
Confidence            9999999998753   4444553

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.88  E-value=4.5e-22  Score=166.44  Aligned_cols=196  Identities=14%  Similarity=0.085  Sum_probs=147.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc---CCCEEEEeccccCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF---GCHVIFHTAALVEP   78 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---~~d~vih~a~~~~~   78 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+               +|++|.+++.++++   ++|++||+||....
T Consensus         8 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~---------------~D~~~~~~v~~~~~~~g~id~lv~nAg~~~~   72 (223)
T 3uce_A            8 VYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG---------------LDISDEKSVYHYFETIGAFDHLIVTAGSYAP   72 (223)
T ss_dssp             EEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT---------------CCTTCHHHHHHHHHHHCSEEEEEECCCCCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc---------------cCCCCHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence            4899999999999999999999999999999864               69999999888875   58999999997421


Q ss_pred             -------CCCCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHH
Q 019878           79 -------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD  150 (334)
Q Consensus        79 -------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E  150 (334)
                             ..+++...+++|+.++.++++++.+... ..++|++||...+.....              ...|+.+|.+.+
T Consensus        73 ~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--------------~~~Y~asK~a~~  138 (223)
T 3uce_A           73 AGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVAN--------------TYVKAAINAAIE  138 (223)
T ss_dssp             CSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTT--------------CHHHHHHHHHHH
T ss_pred             CCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCC--------------chHHHHHHHHHH
Confidence                   1223456789999999999999987621 238999999877654321              367999999999


Q ss_pred             HHHHHHhh-c-CCCEEEEecCceecCCCCCchh-HHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC-
Q 019878          151 KIALQAAS-E-GLPIVPVYPGVIYGPGKLTTGN-LVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR-  226 (334)
Q Consensus       151 ~~~~~~~~-~-g~~~~ilR~~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-  226 (334)
                      .+.+.+.. . .+++..++|+.+.++....... ....+........         ....+.+++|+|++++.++.... 
T Consensus       139 ~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dvA~~~~~l~~~~~~  209 (223)
T 3uce_A          139 ATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHL---------PVGKVGEASDIAMAYLFAIQNSYM  209 (223)
T ss_dssp             HHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHS---------TTCSCBCHHHHHHHHHHHHHCTTC
T ss_pred             HHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcC---------CCCCccCHHHHHHHHHHHccCCCC
Confidence            99888764 2 3999999999999874322211 1112222222221         12347789999999999998654 


Q ss_pred             CCCeEEecC
Q 019878          227 SGERYLLTG  235 (334)
Q Consensus       227 ~g~~~~i~g  235 (334)
                      .|+++++.|
T Consensus       210 tG~~i~vdg  218 (223)
T 3uce_A          210 TGTVIDVDG  218 (223)
T ss_dssp             CSCEEEEST
T ss_pred             CCcEEEecC
Confidence            699999964

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.88  E-value=3.1e-22  Score=176.42  Aligned_cols=160  Identities=26%  Similarity=0.270  Sum_probs=122.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC-----CCC-----CCCCeEEEEcCCCChhhHHHHhc-------
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-----GLP-----SEGALELVYGDVTDYRSLVDACF-------   64 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~-----~~~~v~~~~~Dl~d~~~~~~~~~-------   64 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.....     .+.     ...++.++.+|++|.+++.++++       
T Consensus         7 ~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g   86 (324)
T 3u9l_A            7 IILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGEDG   86 (324)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            5999999999999999999999999999999742211     000     01368999999999999888876       


Q ss_pred             CCCEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHH----HhcCCCcEEEEecccceeccCCCccCCCCCccc
Q 019878           65 GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAA----KETKTVEKIIYTSSFFALGSTDGYIADENQVHE  134 (334)
Q Consensus        65 ~~d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~  134 (334)
                      ++|+|||+||....      ..+++...+++|+.|+.++++++    ++. +.+++|++||...+.....          
T Consensus        87 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~-~~g~iV~isS~~~~~~~~~----------  155 (324)
T 3u9l_A           87 RIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQ-KHGLLIWISSSSSAGGTPP----------  155 (324)
T ss_dssp             CCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCCS----------
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEEecchhccCCCC----------
Confidence            69999999997422      12234567899999999999999    444 5679999999877642210          


Q ss_pred             cccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 019878          135 EKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (334)
Q Consensus       135 ~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~  175 (334)
                         ..+.|+.||.+.|.+.+.+.    .+|+++++++||.+.++.
T Consensus       156 ---~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~  197 (324)
T 3u9l_A          156 ---YLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGT  197 (324)
T ss_dssp             ---SCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC----
T ss_pred             ---cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCc
Confidence               13679999999998887765    358999999999998653

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.88  E-value=1.3e-22  Score=175.44  Aligned_cols=209  Identities=17%  Similarity=0.124  Sum_probs=141.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCC-CCCC----CC-CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~----~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.. ....    +. ...++.++.+|++|.+++.++++       ++|+
T Consensus        31 ~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  110 (280)
T 4da9_A           31 VAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGRIDC  110 (280)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSCCCE
T ss_pred             EEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4999999999999999999999999999997432 1110    00 01368999999999998887775       6899


Q ss_pred             EEEeccccC--C------CCCCcccchhhhhHHHHHHHHHHHhcC---C---CcEEEEecccceeccCCCccCCCCCccc
Q 019878           69 IFHTAALVE--P------WLPDPSRFFAVNVEGLKNVVQAAKETK---T---VEKIIYTSSFFALGSTDGYIADENQVHE  134 (334)
Q Consensus        69 vih~a~~~~--~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~---~~~~v~~Ss~~v~~~~~~~~~~e~~~~~  134 (334)
                      +||+||...  .      ..++++..+++|+.++.++++++.+..   +   ..++|++||...+.....          
T Consensus       111 lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~----------  180 (280)
T 4da9_A          111 LVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPE----------  180 (280)
T ss_dssp             EEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------C----------
T ss_pred             EEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCC----------
Confidence            999999731  1      223456788999999999999887651   1   458999999877643221          


Q ss_pred             cccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeee
Q 019878          135 EKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCH  210 (334)
Q Consensus       135 ~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  210 (334)
                          ...|+.+|.+.+.+.+.+.    ++|+++..++||.+.++.....   ..........+        ......+..
T Consensus       181 ----~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~--------~~p~~r~~~  245 (280)
T 4da9_A          181 ----RLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAV---SGKYDGLIESG--------LVPMRRWGE  245 (280)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC---------------------------------CCBC
T ss_pred             ----ccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhc---chhHHHHHhhc--------CCCcCCcCC
Confidence                2669999999988887654    3589999999999988743211   01111000010        112345788


Q ss_pred             HHHHHHHHHHHhhcCC---CCCeEEecC
Q 019878          211 VDDVVDGHIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       211 v~D~a~a~~~~~~~~~---~g~~~~i~g  235 (334)
                      ++|+|+++..++....   .|+++++.|
T Consensus       246 pedvA~~v~~L~s~~~~~itG~~i~vdG  273 (280)
T 4da9_A          246 PEDIGNIVAGLAGGQFGFATGSVIQADG  273 (280)
T ss_dssp             HHHHHHHHHHHHTSTTGGGTTCEEEEST
T ss_pred             HHHHHHHHHHHhCccccCCCCCEEEECC
Confidence            9999999999987643   699999964

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.88  E-value=1e-22  Score=174.55  Aligned_cols=207  Identities=20%  Similarity=0.216  Sum_probs=152.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC----CCCCCCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS----GLPSEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      +++|||||+|+||.++++.|+++|++|++++|++++..    .+.  .++.++.+|++|.+++.++++       ++|+|
T Consensus         7 k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   84 (263)
T 2a4k_A            7 KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE--AEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   84 (263)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC--SSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence            36999999999999999999999999999999865322    121  268899999999998887765       47999


Q ss_pred             EEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCccccccccChH
Q 019878           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (334)
Q Consensus        70 ih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y  142 (334)
                      ||+||....      ..++++..+++|+.++.++++++.+.. ...++|++||...++ ..              ....|
T Consensus        85 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-~~--------------~~~~Y  149 (263)
T 2a4k_A           85 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLG-AF--------------GLAHY  149 (263)
T ss_dssp             EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCC-HH--------------HHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcC-CC--------------CcHHH
Confidence            999997432      112345678999999999999998863 135999999988772 11              13679


Q ss_pred             HHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHH
Q 019878          143 ERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGH  218 (334)
Q Consensus       143 ~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  218 (334)
                      +.+|.+.+.+.+.+.    ++|+++++++||.+.++......   ........... +        ...+.+++|+|+++
T Consensus       150 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~-p--------~~~~~~p~dvA~~v  217 (263)
T 2a4k_A          150 AAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLP---PWAWEQEVGAS-P--------LGRAGRPEEVAQAA  217 (263)
T ss_dssp             HHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSC---HHHHHHHHHTS-T--------TCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcC---HHHHHHHHhcC-C--------CCCCcCHHHHHHHH
Confidence            999998777766543    46899999999999987532211   11111111111 1        12478899999999


Q ss_pred             HHHhhcC---CCCCeEEecCC
Q 019878          219 IAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       219 ~~~~~~~---~~g~~~~i~g~  236 (334)
                      ..++...   ..|+++++.|.
T Consensus       218 ~~l~s~~~~~~tG~~i~vdgG  238 (263)
T 2a4k_A          218 LFLLSEESAYITGQALYVDGG  238 (263)
T ss_dssp             HHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHhCccccCCcCCEEEECCC
Confidence            9998753   36889999643

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.88  E-value=5.6e-22  Score=170.33  Aligned_cols=208  Identities=17%  Similarity=0.123  Sum_probs=149.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC------CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP------SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+....+.      ...++.++.+|++|.+++.++++       ++|+
T Consensus        23 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~  102 (267)
T 1vl8_A           23 VALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDT  102 (267)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5999999999999999999999999999999864321110      01257889999999998887765       6899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccce-eccCCCccCCCCCccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFA-LGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v-~~~~~~~~~~e~~~~~~~~~  138 (334)
                      |||+||....      ..+++...+++|+.++.++++++.+.   .+.+++|++||..+ +....              +
T Consensus       103 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------------~  168 (267)
T 1vl8_A          103 VVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMP--------------N  168 (267)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSS--------------S
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCC--------------C
Confidence            9999997432      11234567899999999999888542   24579999999763 22111              1


Q ss_pred             cChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHH--HHHHHHHHcCCCCccccCCCCceeeeeHH
Q 019878          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLV--AKLMIERFNGRLPGYIGYGNDRFSFCHVD  212 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  212 (334)
                      ...|+.+|.+.+.+.+.+.    ++|+++++++|+.+.++..   ....  ........... +        ...+.+++
T Consensus       169 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~---~~~~~~~~~~~~~~~~~-p--------~~~~~~p~  236 (267)
T 1vl8_A          169 ISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMT---EAVFSDPEKLDYMLKRI-P--------LGRTGVPE  236 (267)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTT---HHHHTCHHHHHHHHHTC-T--------TSSCBCGG
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccc---cccccChHHHHHHHhhC-C--------CCCCcCHH
Confidence            3679999999998887754    3599999999999987642   1111  11111111111 1        12478899


Q ss_pred             HHHHHHHHHhhcC---CCCCeEEecC
Q 019878          213 DVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       213 D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      |+|+++..++...   ..|+++.+.|
T Consensus       237 dvA~~v~~l~s~~~~~itG~~i~vdG  262 (267)
T 1vl8_A          237 DLKGVAVFLASEEAKYVTGQIIFVDG  262 (267)
T ss_dssp             GGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHcCccccCCcCCeEEECC
Confidence            9999999998653   3688999864

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.88  E-value=1.1e-22  Score=173.97  Aligned_cols=210  Identities=17%  Similarity=0.089  Sum_probs=151.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEE-EcCCCCCCCC----C-CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRAL-VRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~----~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+|+||+++++.|+++|++|+++ +|+.+....+    . ...++.++.+|++|.+++.++++       ++|+
T Consensus         6 ~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (258)
T 3oid_A            6 CALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLDV   85 (258)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            59999999999999999999999999997 6664322110    0 01368999999999998887765       4799


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      +||+||....      ..++++..+++|+.++.++++++.+.   .+..++|++||...+.....              .
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------------~  151 (258)
T 3oid_A           86 FVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLEN--------------Y  151 (258)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTT--------------C
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCC--------------c
Confidence            9999996322      12234567899999999999998543   24569999999876643221              3


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      +.|+.+|.+.+.+.+.+.    ++|+++..++||.+.++....... ............         ....+.+++|+|
T Consensus       152 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~---------p~~r~~~~~dva  221 (258)
T 3oid_A          152 TTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPN-REDLLEDARQNT---------PAGRMVEIKDMV  221 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTT-HHHHHHHHHHHC---------TTSSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhccc-CHHHHHHHHhcC---------CCCCCcCHHHHH
Confidence            679999999998888765    358999999999998874321111 111122221111         123478899999


Q ss_pred             HHHHHHhhcC---CCCCeEEecC
Q 019878          216 DGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       216 ~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +++..++...   ..|+++++.|
T Consensus       222 ~~v~~L~s~~~~~itG~~i~vdG  244 (258)
T 3oid_A          222 DTVEFLVSSKADMIRGQTIIVDG  244 (258)
T ss_dssp             HHHHHHTSSTTTTCCSCEEEEST
T ss_pred             HHHHHHhCcccCCccCCEEEECC
Confidence            9999998764   3699999964

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.88  E-value=5.8e-23  Score=180.91  Aligned_cols=217  Identities=16%  Similarity=0.093  Sum_probs=142.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-------CCCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-------SEGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      +||||||+|+||.++++.|+++|++|++++|+.++...+.       ....+.++.+|++|.+++.++++       ++|
T Consensus        10 ~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id   89 (319)
T 3ioy_A           10 TAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPVS   89 (319)
T ss_dssp             EEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTCCEE
T ss_pred             EEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCCCCC
Confidence            5999999999999999999999999999999865432111       00168999999999998888775       479


Q ss_pred             EEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC---------CCcEEEEecccceeccCCCccCCCCCc
Q 019878           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---------TVEKIIYTSSFFALGSTDGYIADENQV  132 (334)
Q Consensus        68 ~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~~v~~Ss~~v~~~~~~~~~~e~~~  132 (334)
                      +|||+||....      ..++++..+++|+.|+.++++++....         ...++|++||...+.+.+.        
T Consensus        90 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~--------  161 (319)
T 3ioy_A           90 ILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGS--------  161 (319)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSS--------
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCC--------
Confidence            99999997432      123355689999999999999987652         2357999999887754332        


Q ss_pred             cccccccChHHHHHH----HHHHHHHHHhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccC-CCCcee
Q 019878          133 HEEKYFCTQYERSKA----VADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGY-GNDRFS  207 (334)
Q Consensus       133 ~~~~~~~~~Y~~sK~----~~E~~~~~~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  207 (334)
                            .+.|+.||.    .+|.+..++.+.|+++++++||.|.++...... .....+.............. ......
T Consensus       162 ------~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (319)
T 3ioy_A          162 ------PGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDD-IRPDALKGEVKPVDKTAVERLAGVHEF  234 (319)
T ss_dssp             ------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC------------------------------CCGGGS
T ss_pred             ------CHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccc-cCchhhcccccchhHHHHHHHHHhhhc
Confidence                  267999999    455555555667999999999999887432111 00111100000000000000 011112


Q ss_pred             eeeHHHHHHHHHHHhhcCCCCCeEEecCC
Q 019878          208 FCHVDDVVDGHIAAMEKGRSGERYLLTGE  236 (334)
Q Consensus       208 ~i~v~D~a~a~~~~~~~~~~g~~~~i~g~  236 (334)
                      .++++|+|++++.+++++   +.+.+++.
T Consensus       235 ~~~pe~vA~~~~~al~~~---~~~i~~~~  260 (319)
T 3ioy_A          235 GMEPDVIGARVIEAMKAN---RLHIFSHP  260 (319)
T ss_dssp             SBCHHHHHHHHHHHHHTT---CSEECCCS
T ss_pred             CCCHHHHHHHHHHHHHcC---CCEEEcCH
Confidence            379999999999999874   34444443

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.88  E-value=1.2e-22  Score=174.88  Aligned_cols=210  Identities=16%  Similarity=0.202  Sum_probs=151.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC---CC-CCCCCeEEEEcCCCChhhHHHHhc------CCCEEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS---GL-PSEGALELVYGDVTDYRSLVDACF------GCHVIFH   71 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~-~~~~~v~~~~~Dl~d~~~~~~~~~------~~d~vih   71 (334)
                      ++|||||+|+||.++++.|+++|++|++++|++....   .+ ....++.++.+|++|.+++.++.+      ++|+|||
T Consensus        33 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD~lv~  112 (273)
T 3uf0_A           33 TAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVDVLVN  112 (273)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCcEEEE
Confidence            5999999999999999999999999999997642110   01 011368899999999988776643      6999999


Q ss_pred             eccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChH
Q 019878           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (334)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y  142 (334)
                      +||....      ..+++...+++|+.++.++++++...   .+..++|++||...+.+...              ...|
T Consensus       113 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~--------------~~~Y  178 (273)
T 3uf0_A          113 NAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRN--------------VAAY  178 (273)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSS--------------CHHH
T ss_pred             CCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCC--------------ChhH
Confidence            9997532      22234668899999999999988432   14579999999877643321              3679


Q ss_pred             HHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHH
Q 019878          143 ERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGH  218 (334)
Q Consensus       143 ~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  218 (334)
                      +.+|.+.+.+.+.+.    ++|+++..++||.++++...... .............         ....+..++|+|+++
T Consensus       179 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~---------p~~r~~~pedva~~v  248 (273)
T 3uf0_A          179 AASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALR-ADDERAAEITARI---------PAGRWATPEDMVGPA  248 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH-TSHHHHHHHHHHS---------TTSSCBCGGGGHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcc-cCHHHHHHHHhcC---------CCCCCCCHHHHHHHH
Confidence            999999988887654    46899999999999987421100 0011111111111         123477899999999


Q ss_pred             HHHhhcC---CCCCeEEecC
Q 019878          219 IAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       219 ~~~~~~~---~~g~~~~i~g  235 (334)
                      ..++...   ..|+++++.|
T Consensus       249 ~~L~s~~a~~itG~~i~vdG  268 (273)
T 3uf0_A          249 VFLASDAASYVHGQVLAVDG  268 (273)
T ss_dssp             HHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhCchhcCCcCCEEEECc
Confidence            9998753   3699999964

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.88  E-value=3.1e-23  Score=183.10  Aligned_cols=226  Identities=19%  Similarity=0.186  Sum_probs=161.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCC----------CCCCC----CC-CCCCeEEEEcCCCChhhHHHHhc--
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT----------SDISG----LP-SEGALELVYGDVTDYRSLVDACF--   64 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~----------~~~~~----~~-~~~~v~~~~~Dl~d~~~~~~~~~--   64 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.          +....    +. ...++.++.+|++|.+++.++++  
T Consensus        29 ~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  108 (322)
T 3qlj_A           29 VVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQTA  108 (322)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            499999999999999999999999999999872          11000    00 01358889999999999887775  


Q ss_pred             -----CCCEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcCC---------CcEEEEecccceeccCCC
Q 019878           65 -----GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT---------VEKIIYTSSFFALGSTDG  124 (334)
Q Consensus        65 -----~~d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~---------~~~~v~~Ss~~v~~~~~~  124 (334)
                           ++|+|||+||....      ..+++...+++|+.++.++++++.....         -.++|++||...+.....
T Consensus       109 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~  188 (322)
T 3qlj_A          109 VETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVG  188 (322)
T ss_dssp             HHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHCBTT
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccCCCC
Confidence                 68999999997432      2234566889999999999998865411         149999999877643321


Q ss_pred             ccCCCCCccccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCcccc
Q 019878          125 YIADENQVHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIG  200 (334)
Q Consensus       125 ~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (334)
                                    ...|+.+|.+.+.+.+.+.    ++|+++..++|+ +..+.......   ..            ..
T Consensus       189 --------------~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~---~~------------~~  238 (322)
T 3qlj_A          189 --------------QGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFA---EM------------MA  238 (322)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCC---C---------------
T ss_pred             --------------CccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhh---hh------------hh
Confidence                          3679999999888877654    468999999999 65543211100   00            00


Q ss_pred             CCCCceeeeeHHHHHHHHHHHhhcC---CCCCeEEecC-CC-----------------CCHHHHHHHHHHHhCCCCCc
Q 019878          201 YGNDRFSFCHVDDVVDGHIAAMEKG---RSGERYLLTG-EN-----------------ASFMQIFDMAAVITGTSRPR  257 (334)
Q Consensus       201 ~~~~~~~~i~v~D~a~a~~~~~~~~---~~g~~~~i~g-~~-----------------~s~~e~~~~i~~~~g~~~~~  257 (334)
                      .......++.++|+|+++..++...   ..|+++++.| ..                 +++.|+++.+.+.+|.+.+.
T Consensus       239 ~~~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~  316 (322)
T 3qlj_A          239 TQDQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKARPP  316 (322)
T ss_dssp             -----CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHSCCC
T ss_pred             ccccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhccCCC
Confidence            1122234668999999999998653   3689999964 32                 37799999999988865544

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.88  E-value=6.9e-23  Score=177.36  Aligned_cols=212  Identities=15%  Similarity=0.129  Sum_probs=152.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CC-CC---CeEEEEcCCCChhhHHHHhc-------CC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS-EG---ALELVYGDVTDYRSLVDACF-------GC   66 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~-~~---~v~~~~~Dl~d~~~~~~~~~-------~~   66 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.++...+    .. ..   ++.++.+|++|.+++.++++       ++
T Consensus         8 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   87 (280)
T 1xkq_A            8 TVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKI   87 (280)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            599999999999999999999999999999986432211    01 11   58899999999998887765       58


Q ss_pred             CEEEEeccccCCC----------CCCcccchhhhhHHHHHHHHHHHhcC---CCcEEEEecccceeccCCCccCCCCCcc
Q 019878           67 HVIFHTAALVEPW----------LPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVH  133 (334)
Q Consensus        67 d~vih~a~~~~~~----------~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~~~~~~e~~~~  133 (334)
                      |+|||+||.....          .+++...+++|+.++.++++++.+..   + +++|++||...+....          
T Consensus        88 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~----------  156 (280)
T 1xkq_A           88 DVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQ----------  156 (280)
T ss_dssp             CEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCC----------
T ss_pred             CEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCC----------
Confidence            9999999974321          12345678999999999999987641   2 6999999987765320          


Q ss_pred             ccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCc---hh---HHHHHHHHHHcCCCCccccCCC
Q 019878          134 EEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTT---GN---LVAKLMIERFNGRLPGYIGYGN  203 (334)
Q Consensus       134 ~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~  203 (334)
                         ++...|+.+|.+.+.+.+.+.    ++|+++.+++|+.++++.....   ..   ........ ....        .
T Consensus       157 ---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~--------~  224 (280)
T 1xkq_A          157 ---PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMAS-HKEC--------I  224 (280)
T ss_dssp             ---CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHH-CTTT--------C
T ss_pred             ---CcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHH-HHcC--------C
Confidence               013679999999988887754    4699999999999998732100   00   00111111 1111        1


Q ss_pred             CceeeeeHHHHHHHHHHHhhcC----CCCCeEEecCC
Q 019878          204 DRFSFCHVDDVVDGHIAAMEKG----RSGERYLLTGE  236 (334)
Q Consensus       204 ~~~~~i~v~D~a~a~~~~~~~~----~~g~~~~i~g~  236 (334)
                      ....+.+++|+|+++..++..+    ..|+++++.|.
T Consensus       225 p~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG  261 (280)
T 1xkq_A          225 PIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGG  261 (280)
T ss_dssp             TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred             CCCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCC
Confidence            1235789999999999988643    36999999653

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.88  E-value=1.1e-22  Score=174.02  Aligned_cols=210  Identities=17%  Similarity=0.094  Sum_probs=145.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC-CC----CCC-CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-IS----GLP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~----~~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+|+||.++++.|+++|++|++++++... ..    .+. ...++.++.+|++|.+++.++++       ++|+
T Consensus        10 ~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   89 (259)
T 3edm_A           10 TIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGEIHG   89 (259)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCSEEE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            59999999999999999999999999998554321 11    010 11368899999999998888775       6899


Q ss_pred             EEEeccccCC-------CCCCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEeccccee-ccCCCccCCCCCcccccccc
Q 019878           69 IFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFAL-GSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        69 vih~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~Ss~~v~-~~~~~~~~~e~~~~~~~~~~  139 (334)
                      +||+||....       ..++++..+++|+.++.++++++.+... ..++|++||...+ ....              ..
T Consensus        90 lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~  155 (259)
T 3edm_A           90 LVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGP--------------GA  155 (259)
T ss_dssp             EEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCST--------------TC
T ss_pred             EEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCC--------------Cc
Confidence            9999986411       1123456889999999999999988621 1389999998776 3221              13


Q ss_pred             ChHHHHHHHHHHHHHHHhh---cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHH
Q 019878          140 TQYERSKAVADKIALQAAS---EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVD  216 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~~---~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  216 (334)
                      ..|+.+|.+.+.+.+.+..   .++++..+.||.+..+.....   .......        ..........+.+++|+|+
T Consensus       156 ~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~---~~~~~~~--------~~~~~~p~~r~~~pedva~  224 (259)
T 3edm_A          156 LAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTF---TKPEVRE--------RVAGATSLKREGSSEDVAG  224 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC---------------------------------CCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccc---cChHHHH--------HHHhcCCCCCCcCHHHHHH
Confidence            6799999999988887652   149999999999987642211   0010111        1111223345778999999


Q ss_pred             HHHHHhhcC---CCCCeEEecCC
Q 019878          217 GHIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       217 a~~~~~~~~---~~g~~~~i~g~  236 (334)
                      ++..++...   ..|+++++.|.
T Consensus       225 ~v~~L~s~~~~~itG~~i~vdGg  247 (259)
T 3edm_A          225 LVAFLASDDAAYVTGACYDINGG  247 (259)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESBC
T ss_pred             HHHHHcCccccCccCCEEEECCC
Confidence            999998754   26999999654

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.88  E-value=5.9e-21  Score=164.92  Aligned_cols=218  Identities=17%  Similarity=0.117  Sum_probs=152.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----------C--------CCCCCeEEEEcCCCChhhHHHHh
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----------L--------PSEGALELVYGDVTDYRSLVDAC   63 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----------~--------~~~~~v~~~~~Dl~d~~~~~~~~   63 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+......          +        .....+.++.+|++|.+++.+++
T Consensus        13 ~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   92 (277)
T 3tsc_A           13 VAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRKVV   92 (277)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence            59999999999999999999999999999985321110          0        00136889999999999888776


Q ss_pred             c-------CCCEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc----CCCcEEEEecccceeccCCCcc
Q 019878           64 F-------GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYI  126 (334)
Q Consensus        64 ~-------~~d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~  126 (334)
                      +       ++|++||+||....      ..++++..+++|+.++.++++++...    +...++|++||...+...+.  
T Consensus        93 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--  170 (277)
T 3tsc_A           93 DDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPF--  170 (277)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCSS--
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCCCC--
Confidence            4       48999999997432      22345668899999999999986553    22458999999877643321  


Q ss_pred             CCCCCccccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCC-CccccC
Q 019878          127 ADENQVHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRL-PGYIGY  201 (334)
Q Consensus       127 ~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  201 (334)
                                  ...|+.+|.+.+.+.+.+.    ++|+++..++||.+.++...  ................ ......
T Consensus       171 ------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~--~~~~~~~~~~~~~~~~~~~~~~~  236 (277)
T 3tsc_A          171 ------------MIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGS--GDMVTAVGQAMETNPQLSHVLTP  236 (277)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGS--HHHHHHHHHHHHTCGGGTTTTCC
T ss_pred             ------------chhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCccc--chhhhhhhhcccccHHHHHHhhh
Confidence                        3679999999888887654    45899999999999887421  1111111111111111 111111


Q ss_pred             CCCceeeeeHHHHHHHHHHHhhcC---CCCCeEEecCC
Q 019878          202 GNDRFSFCHVDDVVDGHIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       202 ~~~~~~~i~v~D~a~a~~~~~~~~---~~g~~~~i~g~  236 (334)
                      .... .+.+++|+|++++.++...   -.|+++++.|.
T Consensus       237 ~~p~-r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  273 (277)
T 3tsc_A          237 FLPD-WVAEPEDIADTVCWLASDESRKVTAAQIPVDQG  273 (277)
T ss_dssp             SSSC-SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ccCC-CCCCHHHHHHHHHHHhCccccCCcCCEEeeCCC
Confidence            1112 3889999999999998754   36999999653

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.88  E-value=1.2e-21  Score=165.77  Aligned_cols=195  Identities=15%  Similarity=0.098  Sum_probs=147.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc---------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF---------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---------~~d~vih~   72 (334)
                      ++|||||+|+||+++++.|+++|++|++++|+++....     ...++.+|++|.+++.++++         ++|+|||+
T Consensus         9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv~~   83 (241)
T 1dhr_A            9 RVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS-----ASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCV   83 (241)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS-----EEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhccC-----CcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEEEc
Confidence            69999999999999999999999999999998765331     46788999999988877764         68999999


Q ss_pred             ccccCC-------CCCCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEecccceeccCCCccCCCCCccccccccChHHH
Q 019878           73 AALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (334)
Q Consensus        73 a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (334)
                      ||....       ..++++..+++|+.++.++++++.+... ..++|++||...+....              +...|+.
T Consensus        84 Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------~~~~Y~a  149 (241)
T 1dhr_A           84 AGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTP--------------GMIGYGM  149 (241)
T ss_dssp             CCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT--------------TBHHHHH
T ss_pred             ccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCC--------------CchHHHH
Confidence            997432       1123456788999999999999987521 24899999987765322              1367999


Q ss_pred             HHHHHHHHHHHHh------hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHH
Q 019878          145 SKAVADKIALQAA------SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGH  218 (334)
Q Consensus       145 sK~~~E~~~~~~~------~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  218 (334)
                      +|.+.+.+.+.+.      ++|+++++++||.+-.+.           .......         .....++..+|+|+++
T Consensus       150 sK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~-----------~~~~~~~---------~~~~~~~~~~~vA~~v  209 (241)
T 1dhr_A          150 AKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM-----------NRKSMPE---------ADFSSWTPLEFLVETF  209 (241)
T ss_dssp             HHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH-----------HHHHSTT---------SCGGGSEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcc-----------ccccCcc---------hhhccCCCHHHHHHHH
Confidence            9999999988865      346999999999886541           1111111         1123467889999999


Q ss_pred             HHHhhcCC---CCCeEEecC
Q 019878          219 IAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       219 ~~~~~~~~---~g~~~~i~g  235 (334)
                      ..++....   .|+++++.|
T Consensus       210 ~~l~~~~~~~~~G~~~~v~g  229 (241)
T 1dhr_A          210 HDWITGNKRPNSGSLIQVVT  229 (241)
T ss_dssp             HHHHTTTTCCCTTCEEEEEE
T ss_pred             HHHhcCCCcCccceEEEEeC
Confidence            99987542   588888853

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.88  E-value=3.3e-22  Score=173.18  Aligned_cols=217  Identities=19%  Similarity=0.113  Sum_probs=152.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CC-CCCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+....    +. ....+.++.+|++|.+++.++++       ++|++
T Consensus        30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  109 (283)
T 3v8b_A           30 VALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHLDIV  109 (283)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            48999999999999999999999999999998653211    11 11368899999999998877775       69999


Q ss_pred             EEeccccCC-------CCCCcccchhhhhHHHHHHHHHH----HhcCCCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           70 FHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAA----KETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        70 ih~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      ||+||....       ..++++..+++|+.++.++++++    ++. +..++|++||...+......            +
T Consensus       110 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~Iv~isS~~~~~~~~~~------------~  176 (283)
T 3v8b_A          110 VANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQR-GGGAIVVVSSINGTRTFTTP------------G  176 (283)
T ss_dssp             EECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCSBTTTBCCST------------T
T ss_pred             EECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCceEEEEcChhhccCCCCC------------C
Confidence            999997421       11234568899999999999998    443 45799999997665421111            1


Q ss_pred             cChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCc--eeeeeHH
Q 019878          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDR--FSFCHVD  212 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~  212 (334)
                      ...|+.+|.+.+.+.+.+.    ++|+++..++||.+..+......... ..   . ..............  ..+..++
T Consensus       177 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~-~~---~-~~~~~~~~~~~~p~~~~r~~~pe  251 (283)
T 3v8b_A          177 ATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRH-EE---E-TAIPVEWPKGQVPITDGQPGRSE  251 (283)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCC-HH---H-HSCCCBCTTCSCGGGTTCCBCHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCccccccccc-ch---h-hhhhhhhhhhcCccccCCCCCHH
Confidence            3679999999998888765    35899999999999887532211000 00   0 00001111111111  3467899


Q ss_pred             HHHHHHHHHhhcC---CCCCeEEecCC
Q 019878          213 DVVDGHIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       213 D~a~a~~~~~~~~---~~g~~~~i~g~  236 (334)
                      |+|+++..++...   -.|+++++.|.
T Consensus       252 dvA~~v~fL~s~~a~~itG~~i~vdGG  278 (283)
T 3v8b_A          252 DVAELIRFLVSERARHVTGSPVWIDGG  278 (283)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHcCccccCCcCCEEEECcC
Confidence            9999999998753   36999999653

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.87  E-value=2.1e-22  Score=169.68  Aligned_cols=187  Identities=19%  Similarity=0.131  Sum_probs=133.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-CCCCeEEEEcCCCChhhHHHHhc-------CCCEEEEec
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-SEGALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~a   73 (334)
                      +||||||+|+||+++++.|+++|++|++++|+.++...+. ...++.++.+|++|.+++.++++       ++|+|||+|
T Consensus         7 ~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~A   86 (234)
T 2ehd_A            7 AVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALVNNA   86 (234)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            4999999999999999999999999999999765322111 01257899999999998877764       689999999


Q ss_pred             cccCC------CCCCcccchhhhhHHHHHHHHHH----HhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHH
Q 019878           74 ALVEP------WLPDPSRFFAVNVEGLKNVVQAA----KETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (334)
Q Consensus        74 ~~~~~------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (334)
                      |....      ..+++...+++|+.++.++++.+    ++. +.+++|++||...+.+..              +.+.|+
T Consensus        87 g~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~~--------------~~~~Y~  151 (234)
T 2ehd_A           87 GVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRR-GGGTIVNVGSLAGKNPFK--------------GGAAYN  151 (234)
T ss_dssp             CCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEECCTTTTSCCT--------------TCHHHH
T ss_pred             CcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCcEEEEECCchhcCCCC--------------CCchhh
Confidence            97432      11234568899999998666655    444 568999999987765321              136799


Q ss_pred             HHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHH
Q 019878          144 RSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHI  219 (334)
Q Consensus       144 ~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  219 (334)
                      .+|.+.+.+.+.+.    ++|++++++||+.+.++....    .        ..          . ..+++++|+|+++.
T Consensus       152 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----~--------~~----------~-~~~~~~~dvA~~~~  208 (234)
T 2ehd_A          152 ASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGN----T--------PG----------Q-AWKLKPEDVAQAVL  208 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEECC---------------------------------------CCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccc----c--------cc----------c-cCCCCHHHHHHHHH
Confidence            99998887776643    468999999999987653110    0        00          0 01578999999999


Q ss_pred             HHhhcCC
Q 019878          220 AAMEKGR  226 (334)
Q Consensus       220 ~~~~~~~  226 (334)
                      .++..+.
T Consensus       209 ~l~~~~~  215 (234)
T 2ehd_A          209 FALEMPG  215 (234)
T ss_dssp             HHHHSCC
T ss_pred             HHhCCCc
Confidence            9998653

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.87  E-value=1.4e-22  Score=174.31  Aligned_cols=208  Identities=16%  Similarity=0.136  Sum_probs=152.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----C-CCCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+.....    . ...++.++.+|++|.+++.++++       ++|+|
T Consensus        28 ~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  107 (271)
T 4ibo_A           28 TALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDVDIL  107 (271)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCCCEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            599999999999999999999999999999976532211    0 01368899999999999888775       68999


Q ss_pred             EEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        70 ih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      ||+||....      ..++++..+++|+.++.++++++.+.   .+..++|++||...+....              +..
T Consensus       108 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~--------------~~~  173 (271)
T 4ibo_A          108 VNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARA--------------TVA  173 (271)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCT--------------TCH
T ss_pred             EECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCC--------------Cch
Confidence            999997432      22345668999999999998887654   1346999999976654322              136


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHH--HHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLV--AKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      .|+.+|.+.+.+.+.+.    ++|+++..++||.+.++...   ...  ...........         ....+..++|+
T Consensus       174 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~---~~~~~~~~~~~~~~~~---------p~~r~~~pedv  241 (271)
T 4ibo_A          174 PYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQ---ALIDNPEFDAWVKART---------PAKRWGKPQEL  241 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH---HHHHCHHHHHHHHHHS---------TTCSCBCGGGG
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchh---hcccCHHHHHHHHhcC---------CCCCCcCHHHH
Confidence            79999999888877654    46899999999999887421   111  11111111111         12346789999


Q ss_pred             HHHHHHHhhcC---CCCCeEEecC
Q 019878          215 VDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       215 a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      |+++..++...   ..|+++++.|
T Consensus       242 a~~v~~L~s~~~~~itG~~i~vdG  265 (271)
T 4ibo_A          242 VGTAVFLSASASDYVNGQIIYVDG  265 (271)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHhCccccCCCCcEEEECC
Confidence            99999988753   3699999964

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.87  E-value=3.6e-23  Score=178.06  Aligned_cols=216  Identities=15%  Similarity=0.154  Sum_probs=151.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-CCCCeEEEEcCCCChhhHHHHhc-------CCCEEEEec
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-SEGALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~a   73 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+++....+. ...++.++.+|++|.+++.++++       ++|+|||+|
T Consensus        11 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nA   90 (270)
T 1yde_A           11 VVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNA   90 (270)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            5999999999999999999999999999999865322111 11258899999999998887765       689999999


Q ss_pred             cccCC-------CCCCcccchhhhhHHHHHHHHHHHhcC--CCcEEEEecccceeccCCCccCCCCCccccccccChHHH
Q 019878           74 ALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (334)
Q Consensus        74 ~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (334)
                      |....       ..++++..+++|+.++.++++++.+..  ..+++|++||...+.....              ...|+.
T Consensus        91 g~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~a  156 (270)
T 1yde_A           91 GHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQ--------------AVPYVA  156 (270)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTT--------------CHHHHH
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCCC--------------CcccHH
Confidence            97432       112345688999999999999987531  2369999999765432211              256999


Q ss_pred             HHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCC----chhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHH
Q 019878          145 SKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLT----TGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVD  216 (334)
Q Consensus       145 sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  216 (334)
                      +|.+.+.+.+.+.    ++|+++.++||+.++++....    .... ...+.......         ....+...+|+|+
T Consensus       157 sKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~---------p~~r~~~p~dva~  226 (270)
T 1yde_A          157 TKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDP-RASIREGMLAQ---------PLGRMGQPAEVGA  226 (270)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSH-HHHHHHHHHTS---------TTSSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccch-HHHHHHHhhcC---------CCCCCcCHHHHHH
Confidence            9999998887754    469999999999999863100    0000 00111111111         1123678999999


Q ss_pred             HHHHHhhcC--CCCCeEEec-CCCCCHH
Q 019878          217 GHIAAMEKG--RSGERYLLT-GENASFM  241 (334)
Q Consensus       217 a~~~~~~~~--~~g~~~~i~-g~~~s~~  241 (334)
                      ++..++...  ..|+.+++. |..+.+.
T Consensus       227 ~v~~L~s~~~~itG~~i~vdGG~~~~~~  254 (270)
T 1yde_A          227 AAVFLASEANFCTGIELLVTGGAELGYG  254 (270)
T ss_dssp             HHHHHHHHCTTCCSCEEEESTTTTSCC-
T ss_pred             HHHHHcccCCCcCCCEEEECCCeecccC
Confidence            999888652  368899996 4555443

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.87  E-value=4.3e-22  Score=169.17  Aligned_cols=208  Identities=18%  Similarity=0.166  Sum_probs=146.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCEEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih   71 (334)
                      |++|||||+|+||.++++.|+++|++|++++|+.+....+..  ..++.++.+|++|.+++.++++       ++|++||
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn   80 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN   80 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            689999999999999999999999999999998653221110  0268899999999999988875       5899999


Q ss_pred             eccccC---C----CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccCh
Q 019878           72 TAALVE---P----WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (334)
Q Consensus        72 ~a~~~~---~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  141 (334)
                      +||...   +    ..+++...+++|+.++.++++++...   .+..++|++||...+.+..              +.+.
T Consensus        81 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~--------------~~~~  146 (248)
T 3asu_A           81 NAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYA--------------GGNV  146 (248)
T ss_dssp             CCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCT--------------TCHH
T ss_pred             CCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCC--------------CCch
Confidence            999742   1    12234568899999999999988632   1457999999987664321              1367


Q ss_pred             HHHHHHHHHHHHHHHh----hcCCCEEEEecCceec-CCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHH
Q 019878          142 YERSKAVADKIALQAA----SEGLPIVPVYPGVIYG-PGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVD  216 (334)
Q Consensus       142 Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  216 (334)
                      |+.+|.+.+.+.+.+.    ++|+++.+++||.+.| +....   .+... ......    ..    ....++.++|+|+
T Consensus       147 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~---~~~~~-~~~~~~----~~----~~~~~~~p~dvA~  214 (248)
T 3asu_A          147 YGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNV---RFKGD-DGKAEK----TY----QNTVALTPEDVSE  214 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC----------------------------------CCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhh---cccCc-hHHHHH----HH----hccCCCCHHHHHH
Confidence            9999999999888764    3489999999999984 42110   00000 000000    00    1123468999999


Q ss_pred             HHHHHhhcCC--CCCeEEec
Q 019878          217 GHIAAMEKGR--SGERYLLT  234 (334)
Q Consensus       217 a~~~~~~~~~--~g~~~~i~  234 (334)
                      ++..++..+.  .|....+.
T Consensus       215 ~v~~l~s~~~~~~g~~i~v~  234 (248)
T 3asu_A          215 AVWWVSTLPAHVNINTLEMM  234 (248)
T ss_dssp             HHHHHHHSCTTCCCCEEEEC
T ss_pred             HHHHHhcCCccceeeEEEEc
Confidence            9999998643  46666663

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.87  E-value=7.9e-23  Score=176.22  Aligned_cols=190  Identities=14%  Similarity=0.080  Sum_probs=142.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC----C-CCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++||||||+|+||.++++.|+++|++|++++|+++....+.    . ..++.++.+|++|.+++.++++       ++|+
T Consensus        32 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~  111 (272)
T 1yb1_A           32 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSI  111 (272)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSE
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCCcE
Confidence            36999999999999999999999999999999764322110    0 1268999999999998877765       6899


Q ss_pred             EEEeccccCCC------CCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           69 IFHTAALVEPW------LPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        69 vih~a~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      |||+||.....      .++....+++|+.++.++++++.+.   .+.+++|++||...+....              +.
T Consensus       112 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------------~~  177 (272)
T 1yb1_A          112 LVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVP--------------FL  177 (272)
T ss_dssp             EEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHH--------------HH
T ss_pred             EEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCC--------------Cc
Confidence            99999974321      1234568899999988887777542   2567999999988765321              13


Q ss_pred             ChHHHHHHHHHHHHHHHhh-------cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHH
Q 019878          140 TQYERSKAVADKIALQAAS-------EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVD  212 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~~-------~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  212 (334)
                      +.|+.+|.+.|.+.+.+..       .|++++++||+.+.++....  ..                    .....+++++
T Consensus       178 ~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~--~~--------------------~~~~~~~~~~  235 (272)
T 1yb1_A          178 LAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN--PS--------------------TSLGPTLEPE  235 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC--TH--------------------HHHCCCCCHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc--cc--------------------ccccCCCCHH
Confidence            6799999999988877542       38999999999998874211  00                    0123478899


Q ss_pred             HHHHHHHHHhhcCC
Q 019878          213 DVVDGHIAAMEKGR  226 (334)
Q Consensus       213 D~a~a~~~~~~~~~  226 (334)
                      |+|++++.++..+.
T Consensus       236 dva~~i~~~~~~~~  249 (272)
T 1yb1_A          236 EVVNRLMHGILTEQ  249 (272)
T ss_dssp             HHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHcCC
Confidence            99999999998653

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.87  E-value=1.9e-22  Score=173.81  Aligned_cols=219  Identities=12%  Similarity=0.026  Sum_probs=154.5

Q ss_pred             CcEEEEcCC--ChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CCCCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            1 MKILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTSDISGL----PSEGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         1 m~ilItG~t--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      ++||||||+  |+||.++++.|+++|++|++++|+......+    ...+.+.++.+|++|.+++.++++       ++|
T Consensus        15 k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   94 (271)
T 3ek2_A           15 KRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWDSLD   94 (271)
T ss_dssp             CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCSCEE
T ss_pred             CEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            469999999  9999999999999999999999984321111    011357899999999999888775       579


Q ss_pred             EEEEeccccCC-----------CCCCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEecccceeccCCCccCCCCCcccc
Q 019878           68 VIFHTAALVEP-----------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEE  135 (334)
Q Consensus        68 ~vih~a~~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~  135 (334)
                      ++||+||....           ..+++...+++|+.++.++++++.+... ..++|++||...+...+.           
T Consensus        95 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-----------  163 (271)
T 3ek2_A           95 GLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPN-----------  163 (271)
T ss_dssp             EEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT-----------
T ss_pred             EEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCCC-----------
Confidence            99999997431           1123456889999999999999987621 248999999877653321           


Q ss_pred             ccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeH
Q 019878          136 KYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHV  211 (334)
Q Consensus       136 ~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  211 (334)
                         .+.|+.+|++.+.+.+.+.    ++|+++.+++||.+..+...... .............+         ...+..+
T Consensus       164 ---~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~~---------~~~~~~p  230 (271)
T 3ek2_A          164 ---YNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIK-SFGKILDFVESNSP---------LKRNVTI  230 (271)
T ss_dssp             ---TTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCH-HHHHHHHHHHHHST---------TSSCCCH
T ss_pred             ---ccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhccc-chHHHHHHHHhcCC---------cCCCCCH
Confidence               3679999999988877754    45899999999999987543221 11222222222211         1236779


Q ss_pred             HHHHHHHHHHhhcC---CCCCeEEec-CCCCCHHHH
Q 019878          212 DDVVDGHIAAMEKG---RSGERYLLT-GENASFMQI  243 (334)
Q Consensus       212 ~D~a~a~~~~~~~~---~~g~~~~i~-g~~~s~~e~  243 (334)
                      +|+|+++..++...   ..|+++++. |...++.++
T Consensus       231 edva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~  266 (271)
T 3ek2_A          231 EQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGM  266 (271)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC
T ss_pred             HHHHHHHHHHcCcccCCeeeeEEEECCCeeeehhhh
Confidence            99999999998753   369999996 555555444

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.87  E-value=6e-21  Score=167.94  Aligned_cols=218  Identities=16%  Similarity=0.160  Sum_probs=151.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC--C---------------CCCCCeEEEEcCCCChhhHHHHhc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG--L---------------PSEGALELVYGDVTDYRSLVDACF   64 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~---------------~~~~~v~~~~~Dl~d~~~~~~~~~   64 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+......  .               ....++.++.+|++|.+++.++++
T Consensus        48 ~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~  127 (317)
T 3oec_A           48 VAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVVD  127 (317)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence            59999999999999999999999999999987432110  0               001368899999999998887775


Q ss_pred             -------CCCEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc----CCCcEEEEecccceeccCCCccC
Q 019878           65 -------GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIA  127 (334)
Q Consensus        65 -------~~d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~  127 (334)
                             ++|++||+||....      ..++++..+++|+.++.++++++...    +...++|++||...+.....   
T Consensus       128 ~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~---  204 (317)
T 3oec_A          128 EALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPG---  204 (317)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCCTT---
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCCCC---
Confidence                   68999999997432      22345568899999999999998653    22458999999877643321   


Q ss_pred             CCCCccccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCC----Cccc
Q 019878          128 DENQVHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRL----PGYI  199 (334)
Q Consensus       128 ~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~----~~~~  199 (334)
                                 ...|+.+|.+.+.+.+.+.    ++|+++..++||.|.++.... .. ....+........    ...+
T Consensus       205 -----------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~  271 (317)
T 3oec_A          205 -----------QSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALN-EK-LLKMFLPHLENPTREDAAELF  271 (317)
T ss_dssp             -----------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHC-HH-HHHHHCTTCSSCCHHHHHHHH
T ss_pred             -----------CcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccc-hh-hhhhhhhhccccchhHHHHHH
Confidence                       3679999999888877754    458999999999998763110 00 0000000000000    0000


Q ss_pred             -cCCCCceeeeeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          200 -GYGNDRFSFCHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       200 -~~~~~~~~~i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                       ......+.|++++|+|+++..++...   -.|+++++.|
T Consensus       272 ~~~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdG  311 (317)
T 3oec_A          272 SQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDG  311 (317)
T ss_dssp             TTTCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             hhhccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECc
Confidence             01111256889999999999988653   3699999964

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.87  E-value=3.9e-22  Score=172.08  Aligned_cols=205  Identities=13%  Similarity=0.083  Sum_probs=147.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHh-CCCeEEEEEcCCCCCCCC----C-CCCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            1 MKILVSGASGYLGGRLCHALLK-QGHSVRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~----~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      ++||||||+|+||+++++.|++ +|++|++++|+.++....    . ...++.++.+|++|.+++.++++       ++|
T Consensus         5 k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id   84 (276)
T 1wma_A            5 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD   84 (276)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            3699999999999999999999 999999999975432110    0 01268899999999999888776       799


Q ss_pred             EEEEeccccCCC------CCCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEecccceeccCCC-----------ccCCC
Q 019878           68 VIFHTAALVEPW------LPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDG-----------YIADE  129 (334)
Q Consensus        68 ~vih~a~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~Ss~~v~~~~~~-----------~~~~e  129 (334)
                      +|||+||.....      ..+++..+++|+.++.++++++.+... .+++|++||...+.....           ....|
T Consensus        85 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~e  164 (276)
T 1wma_A           85 VLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITE  164 (276)
T ss_dssp             EEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCH
T ss_pred             EEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccccccch
Confidence            999999974321      123456789999999999999988621 249999999877743110           01111


Q ss_pred             CCc----------------cccccccChHHHHHHHHHHHHHHHh----h----cCCCEEEEecCceecCCCCCchhHHHH
Q 019878          130 NQV----------------HEEKYFCTQYERSKAVADKIALQAA----S----EGLPIVPVYPGVIYGPGKLTTGNLVAK  185 (334)
Q Consensus       130 ~~~----------------~~~~~~~~~Y~~sK~~~E~~~~~~~----~----~g~~~~ilR~~~v~G~~~~~~~~~~~~  185 (334)
                      ++.                ..+..+.+.|+.+|.+.|.+.+.+.    +    .|+++++++||.+.++....       
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~-------  237 (276)
T 1wma_A          165 EELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP-------  237 (276)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT-------
T ss_pred             hhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc-------
Confidence            110                0011123789999999988887654    3    48999999999998763210       


Q ss_pred             HHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC-----CCCeEE
Q 019878          186 LMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR-----SGERYL  232 (334)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-----~g~~~~  232 (334)
                                          ..+.+++|+|++++.++..+.     .|.++.
T Consensus       238 --------------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~  269 (276)
T 1wma_A          238 --------------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS  269 (276)
T ss_dssp             --------------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred             --------------------cccCChhHhhhhHhhhhcCcccccccCceEec
Confidence                                136789999999999987541     465554

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.87  E-value=9.6e-23  Score=173.15  Aligned_cols=208  Identities=17%  Similarity=0.161  Sum_probs=150.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+.......  ..++.++.+|++|.+++.++++       ++|++||+
T Consensus         8 ~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~n   87 (247)
T 3rwb_A            8 TALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDILVNN   87 (247)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEEC
Confidence            59999999999999999999999999999998653221100  1268899999999998888775       68999999


Q ss_pred             ccccCC------CCCCcccchhhhhHHHHHHHHHH----HhcCCCcEEEEecccceeccCCCccCCCCCccccccccChH
Q 019878           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAA----KETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (334)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y  142 (334)
                      ||....      ..++++..+++|+.++.++++++    ++.+...++|++||...+...+.              ...|
T Consensus        88 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y  153 (247)
T 3rwb_A           88 ASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPN--------------MAAY  153 (247)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTT--------------CHHH
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCC--------------chhh
Confidence            997432      22345668899999999999984    44323579999999877654322              3679


Q ss_pred             HHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCch-hHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHH
Q 019878          143 ERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTG-NLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDG  217 (334)
Q Consensus       143 ~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  217 (334)
                      +.+|.+.+.+.+.+.    ++|+++..++||.+.++...... ....... ...           .....+..++|++++
T Consensus       154 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~-~~~-----------~~~~r~~~pedva~~  221 (247)
T 3rwb_A          154 VAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFV-EML-----------QAMKGKGQPEHIADV  221 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHH-HHH-----------SSSCSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHH-hcc-----------cccCCCcCHHHHHHH
Confidence            999998887776654    46999999999999875311100 0000111 000           112235679999999


Q ss_pred             HHHHhhcC---CCCCeEEecC
Q 019878          218 HIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       218 ~~~~~~~~---~~g~~~~i~g  235 (334)
                      +..++...   -.|+++++.|
T Consensus       222 v~~L~s~~~~~itG~~i~vdG  242 (247)
T 3rwb_A          222 VSFLASDDARWITGQTLNVDA  242 (247)
T ss_dssp             HHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHhCccccCCCCCEEEECC
Confidence            99998754   3699999965

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.87  E-value=2.2e-22  Score=173.33  Aligned_cols=208  Identities=16%  Similarity=0.158  Sum_probs=150.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC-CCC----C-CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-SGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      +||||||+|+||.++++.|+++|++|++++|+.... +.+    . ...++.++.+|++|.+++.++++       ++|+
T Consensus        31 ~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~  110 (271)
T 4iin_A           31 NVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLSY  110 (271)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            599999999999999999999999999999964321 100    0 01268999999999998887775       6899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      |||+||....      ..+++...+++|+.++.++++.+.+.   .+..++|++||...+.+...              .
T Consensus       111 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  176 (271)
T 4iin_A          111 LVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMG--------------Q  176 (271)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT--------------C
T ss_pred             EEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCC--------------c
Confidence            9999997432      12245568899999999988887553   14569999999876643321              3


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      +.|+.+|.+.+.+.+.+.    ..|+++..++||.+..+....    +......        ..........+.+++|+|
T Consensus       177 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~----~~~~~~~--------~~~~~~~~~~~~~p~dvA  244 (271)
T 4iin_A          177 TNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNAN----LKDELKA--------DYVKNIPLNRLGSAKEVA  244 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC------------------------CGGGCTTCSCBCHHHHH
T ss_pred             hHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhh----hcHHHHH--------HHHhcCCcCCCcCHHHHH
Confidence            679999999998887754    358999999999998764211    1111111        111112334588999999


Q ss_pred             HHHHHHhhcC---CCCCeEEecC
Q 019878          216 DGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       216 ~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +++..++...   ..|+++++.|
T Consensus       245 ~~i~~l~s~~~~~itG~~i~vdG  267 (271)
T 4iin_A          245 EAVAFLLSDHSSYITGETLKVNG  267 (271)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHhCCCcCCCcCCEEEeCC
Confidence            9999998754   3699999965

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.87  E-value=8.1e-22  Score=169.29  Aligned_cols=210  Identities=18%  Similarity=0.116  Sum_probs=151.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC------CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP------SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+......      ...++.++.+|++|.+++.++++       ++|+
T Consensus        22 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~  101 (266)
T 4egf_A           22 RALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLDV  101 (266)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTSCSE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5999999999999999999999999999999765322110      01368999999999998877765       6899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc----CCCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      +||+||....      ..++++..+++|+.++.++++++.+.    +...++|++||...+.....              
T Consensus       102 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------  167 (266)
T 4egf_A          102 LVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPD--------------  167 (266)
T ss_dssp             EEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT--------------
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCC--------------
Confidence            9999997432      12234568899999999999988654    12359999999877653321              


Q ss_pred             cChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      ...|+.+|.+.+.+.+.+.    ++|+++..++|+.+.++....... ............         ....+..++|+
T Consensus       168 ~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~---------p~~r~~~p~dv  237 (266)
T 4egf_A          168 HYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWG-DEAKSAPMIARI---------PLGRFAVPHEV  237 (266)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTC-SHHHHHHHHTTC---------TTSSCBCHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhcc-ChHHHHHHHhcC---------CCCCCcCHHHH
Confidence            3679999998888777654    458999999999998763100000 011111122221         12346789999


Q ss_pred             HHHHHHHhhcC---CCCCeEEecC
Q 019878          215 VDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       215 a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      |+++..++...   -.|+++++.|
T Consensus       238 a~~v~~L~s~~~~~itG~~i~vdG  261 (266)
T 4egf_A          238 SDAVVWLASDAASMINGVDIPVDG  261 (266)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHhCchhcCccCcEEEECC
Confidence            99999998753   3699999964

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.87  E-value=2.3e-22  Score=169.08  Aligned_cols=193  Identities=17%  Similarity=0.121  Sum_probs=139.7

Q ss_pred             Cc-EEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhcC----CCEEEEec
Q 019878            1 MK-ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACFG----CHVIFHTA   73 (334)
Q Consensus         1 m~-ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~~----~d~vih~a   73 (334)
                      || +|||||+|+||.++++.|+++|++|++++|+.++...+..  ..++.++.+|++|.+++.+++++    .|+|||+|
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~A   80 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSA   80 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECC
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeC
Confidence            65 9999999999999999999999999999998654321110  13688999999999999998876    39999999


Q ss_pred             cccCC------CCCCcccchhhhhHHHHHHHHHHHhcC--CCcEEEEecccceeccCCCccCCCCCccccccccChHHHH
Q 019878           74 ALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (334)
Q Consensus        74 ~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (334)
                      |....      ..+++...+++|+.++.++++++.+..  ...++|++||...+.....              .+.|+.+
T Consensus        81 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~~~Y~as  146 (230)
T 3guy_A           81 GSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQ--------------ESTYCAV  146 (230)
T ss_dssp             CCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCTT--------------CHHHHHH
T ss_pred             CcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCCC--------------CchhHHH
Confidence            97432      122345688999999999999987752  1128999999877653221              3679999


Q ss_pred             HHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHH
Q 019878          146 KAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAA  221 (334)
Q Consensus       146 K~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~  221 (334)
                      |.+.+.+.+.+.    ++|+++..++||.+..+....           . ..        ......+++++|+|+++..+
T Consensus       147 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-----------~-~~--------~~~~~~~~~~~dvA~~i~~l  206 (230)
T 3guy_A          147 KWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWET-----------S-GK--------SLDTSSFMSAEDAALMIHGA  206 (230)
T ss_dssp             HHHHHHHHHHHHHHTTTSSCEEEEEEECCC------------------------------------CCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHh-----------c-CC--------CCCcccCCCHHHHHHHHHHH
Confidence            999998888765    348999999999997653211           0 00        01234578999999999999


Q ss_pred             hhcCCC
Q 019878          222 MEKGRS  227 (334)
Q Consensus       222 ~~~~~~  227 (334)
                      +.++..
T Consensus       207 ~~~~~~  212 (230)
T 3guy_A          207 LANIGN  212 (230)
T ss_dssp             CCEETT
T ss_pred             HhCcCC
Confidence            986543

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.87  E-value=2e-22  Score=174.14  Aligned_cols=211  Identities=12%  Similarity=0.094  Sum_probs=151.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC------CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP------SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+......      ...++.++.+|++|.+++.++++       ++|+
T Consensus        29 ~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~  108 (277)
T 4fc7_A           29 VAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDI  108 (277)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5999999999999999999999999999999864321100      01268999999999998887765       6899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC---CCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      |||+||....      ..++++..+++|+.++.++++++....   +..++|++||...+.....              .
T Consensus       109 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  174 (277)
T 4fc7_A          109 LINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQAL--------------Q  174 (277)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTT--------------C
T ss_pred             EEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCC--------------c
Confidence            9999996322      223456688999999999999985431   3469999999877653321              2


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      ..|+.+|.+.+.+.+.+.    ++|+++..++||.+.++....................         ....+..++|+|
T Consensus       175 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~p~dvA  245 (277)
T 4fc7_A          175 VHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTAS---------PLQRLGNKTEIA  245 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTS---------TTSSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccC---------CCCCCcCHHHHH
Confidence            679999999888777654    4589999999999988621000000011112222221         122467899999


Q ss_pred             HHHHHHhhcC---CCCCeEEecC
Q 019878          216 DGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       216 ~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +++..++...   -.|+++++.|
T Consensus       246 ~~v~fL~s~~~~~itG~~i~vdG  268 (277)
T 4fc7_A          246 HSVLYLASPLASYVTGAVLVADG  268 (277)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHcCCccCCcCCCEEEECC
Confidence            9999998753   3699999965

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.87  E-value=8.1e-22  Score=170.17  Aligned_cols=211  Identities=11%  Similarity=0.037  Sum_probs=151.2

Q ss_pred             cEEEEcCC--ChhhHHHHHHHHhCCCeEEEEEcCCCC---CCCCCC-CCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTSD---ISGLPS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~t--G~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+  |+||.++++.|+++|++|++++|+.+.   ...+.. .+.+.++.+|++|.+++.++++       ++|+
T Consensus         8 ~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   87 (275)
T 2pd4_A            8 KGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSLDF   87 (275)
T ss_dssp             EEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCEEE
T ss_pred             EEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            59999999  999999999999999999999998741   111100 1247889999999998887765       5899


Q ss_pred             EEEeccccCC----------CCCCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEecccceeccCCCccCCCCCcccccc
Q 019878           69 IFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        69 vih~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~  137 (334)
                      |||+||....          ..++++..+++|+.++.++++++.+... ..++|++||...+....              
T Consensus        88 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~--------------  153 (275)
T 2pd4_A           88 IVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMA--------------  153 (275)
T ss_dssp             EEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT--------------
T ss_pred             EEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCC--------------
Confidence            9999997431          1223456889999999999999988621 14899999976654321              


Q ss_pred             ccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHH
Q 019878          138 FCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                      ....|+.+|.+.+.+.+.+.    ++|+++.+++||.+.++....... ............+.         ..+.+++|
T Consensus       154 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p~---------~~~~~p~d  223 (275)
T 2pd4_A          154 HYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIAD-FRMILKWNEINAPL---------RKNVSLEE  223 (275)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTT-HHHHHHHHHHHSTT---------SSCCCHHH
T ss_pred             CchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccc-cHHHHHHHHhcCCc---------CCCCCHHH
Confidence            13679999999998887754    348999999999999875321111 11222221111111         13567999


Q ss_pred             HHHHHHHHhhcC---CCCCeEEecCC
Q 019878          214 VVDGHIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       214 ~a~a~~~~~~~~---~~g~~~~i~g~  236 (334)
                      +|++++.++...   ..|+++++.|.
T Consensus       224 va~~~~~l~s~~~~~~tG~~~~vdgg  249 (275)
T 2pd4_A          224 VGNAGMYLLSSLSSGVSGEVHFVDAG  249 (275)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHhCccccCCCCCEEEECCC
Confidence            999999998643   36889999653

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.87  E-value=9.1e-21  Score=162.89  Aligned_cols=208  Identities=17%  Similarity=0.140  Sum_probs=151.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCC-CCCC----C-CCCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DISG----L-PSEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~----~-~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+|+||.++++.|+++|++|+++.++.. ....    + ....++.++.+|++|.+++.++++       ++|+
T Consensus        28 ~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~  107 (267)
T 4iiu_A           28 SVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGAWYG  107 (267)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            5999999999999999999999999987665432 1110    0 011368999999999998887775       6899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHh----cCCCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKE----TKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      |||+||....      ..+++...+++|+.++.++++.+..    .....++|++||...+.....              
T Consensus       108 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------  173 (267)
T 4iiu_A          108 VVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRG--------------  173 (267)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTT--------------
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCC--------------
Confidence            9999997432      2234566889999999999998742    124679999999876643321              


Q ss_pred             cChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          139 CTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      ...|+.+|.+.+.+.+.+    .+.|+++.+++||.+.++.....    ...........+         ...+..++|+
T Consensus       174 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~p---------~~~~~~~edv  240 (267)
T 4iiu_A          174 QVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME----ESALKEAMSMIP---------MKRMGQAEEV  240 (267)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC----HHHHHHHHHTCT---------TCSCBCHHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc----HHHHHHHHhcCC---------CCCCcCHHHH
Confidence            367999999777766654    34589999999999998864332    222222222221         2246789999


Q ss_pred             HHHHHHHhhcC---CCCCeEEecCC
Q 019878          215 VDGHIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       215 a~a~~~~~~~~---~~g~~~~i~g~  236 (334)
                      |+++..++...   ..|+++++.|.
T Consensus       241 a~~~~~L~s~~~~~itG~~i~vdGG  265 (267)
T 4iiu_A          241 AGLASYLMSDIAGYVTRQVISINGG  265 (267)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHhCCcccCccCCEEEeCCC
Confidence            99999998753   36999999653

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.87  E-value=4.4e-21  Score=166.24  Aligned_cols=214  Identities=15%  Similarity=0.090  Sum_probs=151.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC-CC----CC-CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-SG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~----~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.... ..    +. ...++.++.+|++|.+++.++++       ++|+
T Consensus        31 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~  110 (283)
T 1g0o_A           31 VALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDI  110 (283)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            599999999999999999999999999999986421 10    10 01268899999999988877664       5899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCccccccccCh
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  141 (334)
                      |||+||....      ..++++..+++|+.++.++++++.+.. +..++|++||...+.....             +...
T Consensus       111 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------~~~~  177 (283)
T 1g0o_A          111 VCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVP-------------KHAV  177 (283)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCS-------------SCHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCC-------------CCcc
Confidence            9999997432      123456688999999999999998862 3469999999765532210             1367


Q ss_pred             HHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCc-hhH-------HHHHHHHHHcCCCCccccCCCCceeee
Q 019878          142 YERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTT-GNL-------VAKLMIERFNGRLPGYIGYGNDRFSFC  209 (334)
Q Consensus       142 Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i  209 (334)
                      |+.+|.+.+.+.+.+.    ++|+++.+++||.+.++..... ..+       -...........       ......+.
T Consensus       178 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~p~~r~~  250 (283)
T 1g0o_A          178 YSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQ-------WSPLRRVG  250 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHH-------SCTTCSCB
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhc-------CCCCCCCc
Confidence            9999999988887654    4589999999999987621000 000       001111111100       01122478


Q ss_pred             eHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          210 HVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       210 ~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +++|+|+++..++...   ..|+++++.|
T Consensus       251 ~p~dvA~~v~~l~s~~~~~itG~~i~vdg  279 (283)
T 1g0o_A          251 LPIDIARVVCFLASNDGGWVTGKVIGIDG  279 (283)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CHHHHHHHHHHHhCccccCcCCCEEEeCC
Confidence            8999999999998753   3688999964

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.87  E-value=2.4e-21  Score=168.89  Aligned_cols=210  Identities=15%  Similarity=0.066  Sum_probs=154.0

Q ss_pred             cEEEEcCCC--hhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC----CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASG--YLGGRLCHALLKQGHSVRALVRRTSDISGLP----SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+|  +||.++++.|+++|++|++++|+......+.    ..+.+.++.+|++|.+++.++++       ++|+
T Consensus        32 ~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  111 (296)
T 3k31_A           32 KGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGSLDF  111 (296)
T ss_dssp             EEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             EEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            599999998  9999999999999999999999864221111    11346889999999999888775       5899


Q ss_pred             EEEeccccCC----------CCCCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEecccceeccCCCccCCCCCcccccc
Q 019878           69 IFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        69 vih~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~  137 (334)
                      +||+||....          ..+++...+++|+.++.++++++..... ..++|++||...+.....             
T Consensus       112 lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~~-------------  178 (296)
T 3k31_A          112 VVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVPH-------------  178 (296)
T ss_dssp             EEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTT-------------
T ss_pred             EEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCCC-------------
Confidence            9999997431          2234566889999999999999987631 248999999876643221             


Q ss_pred             ccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHH
Q 019878          138 FCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                       .+.|+.+|.+.+.+.+.+.    ++|+++..++||.+.++....... ............+         ...+..++|
T Consensus       179 -~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p---------~~r~~~ped  247 (296)
T 3k31_A          179 -YNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISD-FHYILTWNKYNSP---------LRRNTTLDD  247 (296)
T ss_dssp             -TTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHH-HHHHHHHHHHHST---------TSSCCCHHH
T ss_pred             -chhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccc-hHHHHHHHHhcCC---------CCCCCCHHH
Confidence             3679999999888877654    458999999999999876433221 1122222221111         123667999


Q ss_pred             HHHHHHHHhhcC---CCCCeEEecC
Q 019878          214 VVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       214 ~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +|++++.++...   .+|+++++.|
T Consensus       248 vA~~v~fL~s~~a~~itG~~i~vdG  272 (296)
T 3k31_A          248 VGGAALYLLSDLGRGTTGETVHVDC  272 (296)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHcCCccCCccCCEEEECC
Confidence            999999998753   3699999964

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.87  E-value=6.5e-22  Score=170.23  Aligned_cols=209  Identities=17%  Similarity=0.173  Sum_probs=150.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC-CCC----C-CCCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISG----L-PSEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~----~-~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+|+||.++++.|+++|++|++++++... ...    + ....++.++.+|++|.+++.++++       ++|+
T Consensus        27 ~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~  106 (269)
T 3gk3_A           27 VAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGKVDV  106 (269)
T ss_dssp             EEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            48999999999999999999999999999854321 100    0 011368999999999998887765       6999


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      |||+||....      ..+++...+++|+.++.++++.+...   .+..++|++||...+.....              .
T Consensus       107 li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  172 (269)
T 3gk3_A          107 LINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFG--------------Q  172 (269)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT--------------B
T ss_pred             EEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCC--------------c
Confidence            9999997432      12234568899999999999988652   14569999999876643321              3


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      +.|+.+|.+.+.+.+.+.    ++|+++..++||.+..+.....   .....    ...    .........+..++|+|
T Consensus       173 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~---~~~~~----~~~----~~~~~~~~~~~~p~dvA  241 (269)
T 3gk3_A          173 ANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAV---PQDVL----EAK----ILPQIPVGRLGRPDEVA  241 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC--------------CC----SGGGCTTSSCBCHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhh---chhHH----HHH----hhhcCCcCCccCHHHHH
Confidence            679999998888777654    4589999999999988753221   11110    100    11112334577899999


Q ss_pred             HHHHHHhhcC---CCCCeEEecC
Q 019878          216 DGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       216 ~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +++..++...   ..|+++++.|
T Consensus       242 ~~v~~L~s~~~~~itG~~i~vdg  264 (269)
T 3gk3_A          242 ALIAFLCSDDAGFVTGADLAING  264 (269)
T ss_dssp             HHHHHHTSTTCTTCCSCEEEEST
T ss_pred             HHHHHHhCCCcCCeeCcEEEECC
Confidence            9999998764   3699999964

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.87  E-value=2.5e-22  Score=172.58  Aligned_cols=216  Identities=15%  Similarity=0.199  Sum_probs=152.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-------CCCCeEEEEcCCCChhhHHHHhc---CCCEEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-------SEGALELVYGDVTDYRSLVDACF---GCHVIFH   71 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~v~~~~~Dl~d~~~~~~~~~---~~d~vih   71 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+......       ....+.++.+|++|.+.+.++++   ++|++||
T Consensus        12 ~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~lv~   91 (267)
T 3t4x_A           12 TALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDILIN   91 (267)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSEEEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCEEEE
Confidence            5999999999999999999999999999999865321110       01257889999999998888775   5899999


Q ss_pred             eccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChH
Q 019878           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (334)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y  142 (334)
                      +||....      ..+++...+++|+.++.++++++.+.   .+..++|++||...+.+...              ...|
T Consensus        92 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y  157 (267)
T 3t4x_A           92 NLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQE--------------MAHY  157 (267)
T ss_dssp             CCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTT--------------CHHH
T ss_pred             CCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCc--------------chHH
Confidence            9997432      11234557899999988887776543   24569999999877643321              3679


Q ss_pred             HHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHH-----------HHHHHHHHcCCCCccccCCCCcee
Q 019878          143 ERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLV-----------AKLMIERFNGRLPGYIGYGNDRFS  207 (334)
Q Consensus       143 ~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~  207 (334)
                      +.+|.+.+.+.+.+.    ++|+++..++||.+.++..   ..++           ............+     ....+.
T Consensus       158 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~r  229 (267)
T 3t4x_A          158 SATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGV---ETMLNSLYPNEQLTIEEAEKRFMKENRP-----TSIIQR  229 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHH---HHHHHHSSTTSCCCHHHHHHHHHHHHCT-----TCSSCS
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccH---HHHHhhcCcccCCCHHHHHHHHhhccCC-----cccccC
Confidence            999999998888765    3479999999999976521   0000           0111111111111     112346


Q ss_pred             eeeHHHHHHHHHHHhhcC---CCCCeEEec-CCCCC
Q 019878          208 FCHVDDVVDGHIAAMEKG---RSGERYLLT-GENAS  239 (334)
Q Consensus       208 ~i~v~D~a~a~~~~~~~~---~~g~~~~i~-g~~~s  239 (334)
                      +.+++|+|+++..++...   -+|+++++. |...+
T Consensus       230 ~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          230 LIRPEEIAHLVTFLSSPLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             CBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred             ccCHHHHHHHHHHHcCccccCccCCeEEECCCcccc
Confidence            889999999999988743   369999996 44333

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.87  E-value=4.5e-22  Score=169.47  Aligned_cols=205  Identities=12%  Similarity=0.066  Sum_probs=138.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCCeEEEEcCCCChhhHHHHhc------CCCEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF------GCHVIF   70 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~v~~~~~Dl~d~~~~~~~~~------~~d~vi   70 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.++...+..     ..++.++.+|++|.+++.++++      ++|++|
T Consensus         9 ~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id~lv   88 (252)
T 3h7a_A            9 TVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLEVTI   88 (252)
T ss_dssp             EEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCceEEE
Confidence            59999999999999999999999999999998765432110     1368999999999999888776      579999


Q ss_pred             EeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccCh
Q 019878           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (334)
Q Consensus        71 h~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  141 (334)
                      |+||....      ..+++...+++|+.++.++++++...   .+..++|++||...+.+...              ...
T Consensus        89 ~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~  154 (252)
T 3h7a_A           89 FNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSG--------------FAA  154 (252)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTT--------------CHH
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCC--------------Ccc
Confidence            99997432      12234568899999999999887542   13469999999876643221              367


Q ss_pred             HHHHHHHHHHHHHHHh----hcCCCE-EEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHH
Q 019878          142 YERSKAVADKIALQAA----SEGLPI-VPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVD  216 (334)
Q Consensus       142 Y~~sK~~~E~~~~~~~----~~g~~~-~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  216 (334)
                      |+.+|.+.+.+.+.+.    .+|+++ .++.||.+..+....   .......         ........+ +..++|+|+
T Consensus       155 Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~---~~~~~~~---------~~~~~~~~~-~~~pedvA~  221 (252)
T 3h7a_A          155 FASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRE---RREQMFG---------KDALANPDL-LMPPAAVAG  221 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC----------------------------------------CCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhc---cchhhhh---------hhhhcCCcc-CCCHHHHHH
Confidence            9999998888777654    458999 899999997763211   1111100         011111223 889999999


Q ss_pred             HHHHHhhcCCCCCeEEe
Q 019878          217 GHIAAMEKGRSGERYLL  233 (334)
Q Consensus       217 a~~~~~~~~~~g~~~~i  233 (334)
                      ++..++..+...-+..+
T Consensus       222 ~~~~l~s~~~~~~~~~i  238 (252)
T 3h7a_A          222 AYWQLYQQPKSAWTFEM  238 (252)
T ss_dssp             HHHHHHHCCGGGBCSEE
T ss_pred             HHHHHHhCchhcceeeE
Confidence            99999987654333333

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.87  E-value=5.8e-22  Score=169.30  Aligned_cols=208  Identities=19%  Similarity=0.160  Sum_probs=148.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEc-CCCCCCC----CC-CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVR-RTSDISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~----~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      +||||||+|+||.++++.|+++|++|+++++ +.+....    +. ...++.++.+|++|.+++.++++       ++|+
T Consensus        15 ~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   94 (256)
T 3ezl_A           15 IAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDV   94 (256)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCCEEE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            5999999999999999999999999999884 3332111    00 01268899999999998887775       5899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      |||+||....      ..+++...+++|+.++.++++++.+.   .+..++|++||...+....              +.
T Consensus        95 lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------~~  160 (256)
T 3ezl_A           95 LVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQF--------------GQ  160 (256)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCS--------------CC
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCC--------------CC
Confidence            9999997432      12334568899999988887776432   1457999999987664332              13


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      +.|+.+|.+.+.+.+.+.    .+|+++.+++|+.+.++.....   ............         ....+.+++|+|
T Consensus       161 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~---------~~~~~~~~~dva  228 (256)
T 3ezl_A          161 TNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI---RPDVLEKIVATI---------PVRRLGSPDEIG  228 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS---CHHHHHHHHHHS---------TTSSCBCHHHHH
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccccc---CHHHHHHHHhcC---------CCCCCcCHHHHH
Confidence            679999998888777654    4589999999999987632111   112222222211         123467899999


Q ss_pred             HHHHHHhhcC---CCCCeEEecC
Q 019878          216 DGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       216 ~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +++..++...   ..|+++++.|
T Consensus       229 ~~~~~l~s~~~~~~tG~~i~vdg  251 (256)
T 3ezl_A          229 SIVAWLASEESGFSTGADFSLNG  251 (256)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHhCCcccCCcCcEEEECC
Confidence            9999988643   3699999964

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.87  E-value=3.8e-22  Score=172.02  Aligned_cols=212  Identities=17%  Similarity=0.167  Sum_probs=151.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEcCCCChhhHHHHhc------CCCEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF------GCHVIF   70 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~------~~d~vi   70 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+....+.     ...++.++.+|++|.+++.++++      ++|++|
T Consensus        35 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD~lv  114 (275)
T 4imr_A           35 TALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPVDILV  114 (275)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCCEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCCEEE
Confidence            5999999999999999999999999999999876543211     11368999999999988877765      689999


Q ss_pred             EeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccCh
Q 019878           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (334)
Q Consensus        71 h~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  141 (334)
                      |+||....      ..++++..+++|+.++.++++++...   .+..++|++||...+.+..              ..+.
T Consensus       115 nnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~--------------~~~~  180 (275)
T 4imr_A          115 INASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKS--------------VVTA  180 (275)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT--------------TBHH
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCC--------------Cchh
Confidence            99997332      12234567899999999999998542   1456999999987665221              1356


Q ss_pred             HHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHH
Q 019878          142 YERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDG  217 (334)
Q Consensus       142 Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  217 (334)
                      |+.+|.+.+.+.+.+.    .+|+++..++||.+..+.....................+        ...+..++|+|++
T Consensus       181 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p--------~~r~~~pedvA~~  252 (275)
T 4imr_A          181 YAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNW--------MGRAGRPEEMVGA  252 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHST--------TCSCBCGGGGHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCc--------cCCCcCHHHHHHH
Confidence            9999999888877654    458999999999997752100000001111111111101        1135679999999


Q ss_pred             HHHHhhcC---CCCCeEEecC
Q 019878          218 HIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       218 ~~~~~~~~---~~g~~~~i~g  235 (334)
                      +..++...   -.|+++++.|
T Consensus       253 v~fL~s~~a~~itG~~i~vdG  273 (275)
T 4imr_A          253 ALFLASEACSFMTGETIFLTG  273 (275)
T ss_dssp             HHHHHSGGGTTCCSCEEEESS
T ss_pred             HHHHcCcccCCCCCCEEEeCC
Confidence            99998753   3699999864

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.87  E-value=2.4e-22  Score=172.99  Aligned_cols=199  Identities=17%  Similarity=0.106  Sum_probs=139.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+....+..  ..++.++.+|++|.+++.++++       ++|+|||+
T Consensus        30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnn  109 (272)
T 4dyv_A           30 IAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNN  109 (272)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            48999999999999999999999999999998653221100  0268899999999999888775       69999999


Q ss_pred             ccccCC-------CCCCcccchhhhhHHHHHHHHHHHhcC---C--CcEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           73 AALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---T--VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        73 a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~--~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      ||....       ..++++..+++|+.++.++++++.+..   +  ..++|++||...+....              +.+
T Consensus       110 Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~--------------~~~  175 (272)
T 4dyv_A          110 AGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRP--------------YSA  175 (272)
T ss_dssp             CCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCT--------------TCH
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCC--------------Cch
Confidence            997432       122345688999999988888876541   1  35999999987664322              136


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHH
Q 019878          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVD  216 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  216 (334)
                      .|+.+|.+.+.+.+.+.    .+|+++..++||.+..+.....    ........         .......+..++|+|+
T Consensus       176 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~----~~~~~~~~---------~~~~~~~~~~pedvA~  242 (272)
T 4dyv_A          176 PYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKM----KAGVPQAD---------LSIKVEPVMDVAHVAS  242 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-------------------------------------CHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhh----cccchhhh---------hcccccCCCCHHHHHH
Confidence            79999999988877654    4589999999999987642110    00000000         0112234789999999


Q ss_pred             HHHHHhhcCCC
Q 019878          217 GHIAAMEKGRS  227 (334)
Q Consensus       217 a~~~~~~~~~~  227 (334)
                      +++.++..+..
T Consensus       243 ~v~fL~s~~~~  253 (272)
T 4dyv_A          243 AVVYMASLPLD  253 (272)
T ss_dssp             HHHHHHHSCTT
T ss_pred             HHHHHhCCCCc
Confidence            99999997654

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.87  E-value=1.6e-21  Score=164.38  Aligned_cols=199  Identities=15%  Similarity=0.130  Sum_probs=146.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC------CCCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL------PSEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.++...+      ....++.++.+|++|.+++.++++       ++|+
T Consensus         4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   83 (235)
T 3l77_A            4 VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVDV   83 (235)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCCCE
Confidence            499999999999999999999999999999986532211      001368999999999999988876       5899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc--CCCcEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET--KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      +||+||....      ..+++...+++|+.++.++++++.+.  ....++|++||...+...+              ..+
T Consensus        84 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~--------------~~~  149 (235)
T 3l77_A           84 VVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIP--------------YGG  149 (235)
T ss_dssp             EEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCT--------------TCH
T ss_pred             EEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCC--------------Ccc
Confidence            9999997432      22345568899999999999998653  1234777777765443221              125


Q ss_pred             hHHHHHHHHHHHHHHHh--hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHH
Q 019878          141 QYERSKAVADKIALQAA--SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGH  218 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~--~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  218 (334)
                      .|+.+|++.+.+.+.+.  ..|+++..++||.+..+.....            ..        ......++.++|+|+++
T Consensus       150 ~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~------------~~--------~~~~~~~~~p~dva~~v  209 (235)
T 3l77_A          150 GYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSK------------PG--------KPKEKGYLKPDEIAEAV  209 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCC------------SC--------CCGGGTCBCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCcccccccccc------------CC--------cccccCCCCHHHHHHHH
Confidence            69999999999888864  3589999999999976532110            00        11122578899999999


Q ss_pred             HHHhhcCC---CCCeEEec
Q 019878          219 IAAMEKGR---SGERYLLT  234 (334)
Q Consensus       219 ~~~~~~~~---~g~~~~i~  234 (334)
                      ..++..+.   .+++....
T Consensus       210 ~~l~~~~~~~~~~~~~~~~  228 (235)
T 3l77_A          210 RCLLKLPKDVRVEELMLRS  228 (235)
T ss_dssp             HHHHTSCTTCCCCEEEECC
T ss_pred             HHHHcCCCCCccceEEEee
Confidence            99998765   35555554

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.86  E-value=3e-20  Score=161.26  Aligned_cols=217  Identities=17%  Similarity=0.114  Sum_probs=152.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC--------------------C-CCCCCeEEEEcCCCChhhHH
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG--------------------L-PSEGALELVYGDVTDYRSLV   60 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------------------~-~~~~~v~~~~~Dl~d~~~~~   60 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+....                    + ....++.++.+|++|.+++.
T Consensus        13 ~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   92 (286)
T 3uve_A           13 VAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDALK   92 (286)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHH
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHH
Confidence            59999999999999999999999999999997432110                    0 01136899999999999988


Q ss_pred             HHhc-------CCCEEEEeccccCC-------CCCCcccchhhhhHHHHHHHHHHHhcC----CCcEEEEecccceeccC
Q 019878           61 DACF-------GCHVIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK----TVEKIIYTSSFFALGST  122 (334)
Q Consensus        61 ~~~~-------~~d~vih~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~v~~Ss~~v~~~~  122 (334)
                      ++++       ++|++||+||....       ..+++...+++|+.++.++++++....    ...++|++||...+...
T Consensus        93 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  172 (286)
T 3uve_A           93 AAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAY  172 (286)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhccCC
Confidence            7775       68999999997432       122455688999999999999886641    24589999998776433


Q ss_pred             CCccCCCCCccccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCC--
Q 019878          123 DGYIADENQVHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLP--  196 (334)
Q Consensus       123 ~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~--  196 (334)
                      +.              ...|+.+|.+.+.+.+.+.    ++|+++..++||.+..+..... ... ..+........+  
T Consensus       173 ~~--------------~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~-~~~~~~~~~~~~~~  236 (286)
T 3uve_A          173 PH--------------TGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNE-GTF-KMFRPDLENPGPDD  236 (286)
T ss_dssp             TT--------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSH-HHH-HHHCTTSSSCCHHH
T ss_pred             CC--------------ccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCccccc-chh-hhccccccccchhh
Confidence            21              3679999998888777654    4689999999999998754321 110 111000000000  


Q ss_pred             --c--cccCCCCceeeeeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          197 --G--YIGYGNDRFSFCHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       197 --~--~~~~~~~~~~~i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                        .  ..... ....+.+++|+|++++.++...   -+|+++++.|
T Consensus       237 ~~~~~~~~~~-~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdG  281 (286)
T 3uve_A          237 MAPICQMFHT-LPIPWVEPIDISNAVLFFASDEARYITGVTLPIDA  281 (286)
T ss_dssp             HHHHHHTTCS-SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHhhhc-cCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECC
Confidence              0  00111 1145789999999999998653   3699999964

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.86  E-value=1.3e-21  Score=166.83  Aligned_cols=210  Identities=18%  Similarity=0.201  Sum_probs=149.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vi   70 (334)
                      ++|||||+|+||.++++.|+++|  +.|++++|+.+....+..  ..++.++.+|++|.+++.++++       ++|++|
T Consensus         4 ~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv   83 (254)
T 3kzv_A            4 VILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDSLV   83 (254)
T ss_dssp             EEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             EEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccEEE
Confidence            59999999999999999999875  788888887654322111  1268999999999998887775       589999


Q ss_pred             EeccccCC-------CCCCcccchhhhhHHHHHHHHHH----HhcCCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           71 HTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAA----KETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        71 h~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      |+||....       ..++++..+++|+.++.++++++    ++. + .++|++||...+.....              .
T Consensus        84 nnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~-g~iv~isS~~~~~~~~~--------------~  147 (254)
T 3kzv_A           84 ANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKT-N-GNVVFVSSDACNMYFSS--------------W  147 (254)
T ss_dssp             EECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEEECCSCCCCSSCC--------------S
T ss_pred             ECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-C-CeEEEEcCchhccCCCC--------------c
Confidence            99997422       11234568899999999999998    443 2 69999999877653221              3


Q ss_pred             ChHHHHHHHHHHHHHHHhh--cCCCEEEEecCceecCCCCCch------hHHHHHHHHHHcCCCCccccCCCCceeeeeH
Q 019878          140 TQYERSKAVADKIALQAAS--EGLPIVPVYPGVIYGPGKLTTG------NLVAKLMIERFNGRLPGYIGYGNDRFSFCHV  211 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~~--~g~~~~ilR~~~v~G~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  211 (334)
                      ..|+.+|.+.+.+.+.+..  .|+++..++||.+.++......      ..-...........         ....+.++
T Consensus       148 ~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~r~~~p  218 (254)
T 3kzv_A          148 GAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLK---------ENNQLLDS  218 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHH---------TTC----C
T ss_pred             chHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHH---------hcCCcCCc
Confidence            6799999999999988764  4899999999999987532110      00011111111111         12347789


Q ss_pred             HHHHHHHHHHhhcC----CCCCeEEecCC
Q 019878          212 DDVVDGHIAAMEKG----RSGERYLLTGE  236 (334)
Q Consensus       212 ~D~a~a~~~~~~~~----~~g~~~~i~g~  236 (334)
                      +|+|+++..++...    .+|+++++.|.
T Consensus       219 ~dva~~v~~L~s~~~~~~itG~~i~vdg~  247 (254)
T 3kzv_A          219 SVPATVYAKLALHGIPDGVNGQYLSYNDP  247 (254)
T ss_dssp             HHHHHHHHHHHHHCCCGGGTTCEEETTCG
T ss_pred             ccHHHHHHHHHhhcccCCCCccEEEecCc
Confidence            99999999998765    26899998764

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.86  E-value=2e-21  Score=169.12  Aligned_cols=210  Identities=13%  Similarity=0.060  Sum_probs=150.6

Q ss_pred             cEEEEcCCCh--hhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CCCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGY--LGGRLCHALLKQGHSVRALVRRTSDISGL----PSEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+|+  ||.++++.|+++|++|++++|++.....+    ...+++.++.+|++|.+++.++++       ++|+
T Consensus        33 ~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  112 (293)
T 3grk_A           33 RGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWGKLDF  112 (293)
T ss_dssp             EEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTSCCSE
T ss_pred             EEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            5999999998  99999999999999999999984311100    001358899999999999887775       5899


Q ss_pred             EEEeccccC----------CCCCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCcccccc
Q 019878           69 IFHTAALVE----------PWLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        69 vih~a~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~  137 (334)
                      +||+||...          ...+++...+++|+.++.++++++.+.. ...++|++||...+.....             
T Consensus       113 lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~-------------  179 (293)
T 3grk_A          113 LVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPN-------------  179 (293)
T ss_dssp             EEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCTT-------------
T ss_pred             EEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCCc-------------
Confidence            999999753          1123455688999999999999998752 2358999999877654321             


Q ss_pred             ccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHH
Q 019878          138 FCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                       ...|+.+|.+.+.+.+.+.    ++|+++..++||.+.++....... ............+         ...+..++|
T Consensus       180 -~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~p---------~~r~~~ped  248 (293)
T 3grk_A          180 -YNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGD-FRYILKWNEYNAP---------LRRTVTIDE  248 (293)
T ss_dssp             -TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CC-HHHHHHHHHHHST---------TSSCCCHHH
T ss_pred             -hHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccc-hHHHHHHHHhcCC---------CCCCCCHHH
Confidence             3679999999988877654    458999999999999874321111 1111221111111         123667999


Q ss_pred             HHHHHHHHhhcC---CCCCeEEecC
Q 019878          214 VVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       214 ~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +|+++..++...   ..|+++++.|
T Consensus       249 vA~~v~~L~s~~~~~itG~~i~vdG  273 (293)
T 3grk_A          249 VGDVGLYFLSDLSRSVTGEVHHADS  273 (293)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHcCccccCCcceEEEECC
Confidence            999999998753   3699999964

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.86  E-value=1.6e-20  Score=163.98  Aligned_cols=217  Identities=16%  Similarity=0.128  Sum_probs=152.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC-C---------------C-CCCCeEEEEcCCCChhhHHHHhc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-L---------------P-SEGALELVYGDVTDYRSLVDACF   64 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~---------------~-~~~~v~~~~~Dl~d~~~~~~~~~   64 (334)
                      ++|||||+|+||.++++.|+++|++|++++|++..... +               . ...++.++.+|++|.+++.++++
T Consensus        30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~  109 (299)
T 3t7c_A           30 VAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAVD  109 (299)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHH
Confidence            59999999999999999999999999999997432100 0               0 01368899999999998887775


Q ss_pred             -------CCCEEEEeccccCC-------CCCCcccchhhhhHHHHHHHHHHHhc----CCCcEEEEecccceeccCCCcc
Q 019878           65 -------GCHVIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYI  126 (334)
Q Consensus        65 -------~~d~vih~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~  126 (334)
                             ++|++||+||....       ..++++..+++|+.++.++++++...    +...++|++||...+.....  
T Consensus       110 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~--  187 (299)
T 3t7c_A          110 DGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAEN--  187 (299)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCCTT--
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCC--
Confidence                   59999999997432       11234668899999999999998654    23569999999877643321  


Q ss_pred             CCCCCccccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCc-----
Q 019878          127 ADENQVHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPG-----  197 (334)
Q Consensus       127 ~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-----  197 (334)
                                  ...|+.+|.+.+.+.+.+.    ++|+++..++||.|.++......  ....+..........     
T Consensus       188 ------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~~~~~~~  253 (299)
T 3t7c_A          188 ------------IGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEP--TYRMFRPDLENPTVEDFQVA  253 (299)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHH--HHHHHCTTSSSCCHHHHHHH
T ss_pred             ------------cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccc--hhhhhhhhhccchhhHHHHH
Confidence                        3679999999888777654    45899999999999987542110  000000000000000     


Q ss_pred             -cccCCCCceeeeeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          198 -YIGYGNDRFSFCHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       198 -~~~~~~~~~~~i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                       ..... ....+..++|+|++++.++...   -.|+++++.|
T Consensus       254 ~~~~~~-~p~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdG  294 (299)
T 3t7c_A          254 SRQMHV-LPIPYVEPADISNAILFLVSDDARYITGVSLPVDG  294 (299)
T ss_dssp             HHHHSS-SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             hhhhcc-cCcCCCCHHHHHHHHHHHhCcccccCcCCEEeeCC
Confidence             00000 1134778999999999998754   3699999964

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.86  E-value=1e-21  Score=168.33  Aligned_cols=192  Identities=18%  Similarity=0.172  Sum_probs=139.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.++...+.     ...++.++.+|++|.+++.++++       ++|+|
T Consensus        31 ~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l  110 (262)
T 3rkr_A           31 VAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCDVL  110 (262)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            5999999999999999999999999999999865432110     01368999999999998887764       48999


Q ss_pred             EEeccccCC-------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           70 FHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        70 ih~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      ||+||....       ..+++...+++|+.++.++++++...   .+..++|++||...+.....              .
T Consensus       111 v~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  176 (262)
T 3rkr_A          111 VNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVAD--------------G  176 (262)
T ss_dssp             EECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTT--------------C
T ss_pred             EECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCC--------------C
Confidence            999997211       12234568899999999999987652   24579999999877643321              3


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      +.|+.+|++.+.+.+.+.    +.|+++.+++||.+..+....       .     ..        ......++..+|+|
T Consensus       177 ~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-------~-----~~--------~~~~~~~~~p~dvA  236 (262)
T 3rkr_A          177 AAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVG-------L-----SA--------KKSALGAIEPDDIA  236 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------CCCHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccc-------c-----cc--------ccccccCCCHHHHH
Confidence            679999999888877654    458999999999997653210       0     00        01223467899999


Q ss_pred             HHHHHHhhcCCC
Q 019878          216 DGHIAAMEKGRS  227 (334)
Q Consensus       216 ~a~~~~~~~~~~  227 (334)
                      +++..++.....
T Consensus       237 ~~v~~l~s~~~~  248 (262)
T 3rkr_A          237 DVVALLATQADQ  248 (262)
T ss_dssp             HHHHHHHTCCTT
T ss_pred             HHHHHHhcCccc
Confidence            999999987543

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.86  E-value=1.9e-20  Score=160.99  Aligned_cols=207  Identities=17%  Similarity=0.167  Sum_probs=150.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC-CCC----CC-CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~----~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+|+||.++++.|+++|++|++++++... ...    +. ...++.++.+|++|.+++.++++       ++|+
T Consensus        33 ~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  112 (271)
T 3v2g_A           33 TAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDI  112 (271)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            59999999999999999999999999999776421 110    00 01368899999999998888775       6899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEeccccee-ccCCCccCCCCCccccccccC
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFAL-GSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~-~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      +||+||....      ..++++..+++|+.++.++++++.+.. ...++|++||.... ++.+              ..+
T Consensus       113 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~~--------------~~~  178 (271)
T 3v2g_A          113 LVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWP--------------GIS  178 (271)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCST--------------TCH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCCC--------------Cch
Confidence            9999997432      223456688999999999999998762 23589999985432 2111              136


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHH
Q 019878          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVD  216 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  216 (334)
                      .|+.+|.+.+.+.+.+.    ++|+++..++||.+.++...........    .....+         ...+..++|+|+
T Consensus       179 ~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~----~~~~~~---------~~r~~~pedvA~  245 (271)
T 3v2g_A          179 LYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHAEA----QRERIA---------TGSYGEPQDIAG  245 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSHHH----HHHTCT---------TSSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhHHH----HHhcCC---------CCCCCCHHHHHH
Confidence            79999998888877654    4589999999999998754322211111    111111         123678999999


Q ss_pred             HHHHHhhcC---CCCCeEEecC
Q 019878          217 GHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       217 a~~~~~~~~---~~g~~~~i~g  235 (334)
                      ++..++...   -.|+++++.|
T Consensus       246 ~v~fL~s~~~~~itG~~i~vdG  267 (271)
T 3v2g_A          246 LVAWLAGPQGKFVTGASLTIDG  267 (271)
T ss_dssp             HHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHhCcccCCccCCEEEeCc
Confidence            999988643   3699999964

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.86  E-value=1.9e-21  Score=168.25  Aligned_cols=210  Identities=13%  Similarity=0.089  Sum_probs=152.6

Q ss_pred             cEEEEcCCCh--hhHHHHHHHHhCCCeEEEEEcCC--CCCCCC-CCCCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGY--LGGRLCHALLKQGHSVRALVRRT--SDISGL-PSEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~--iG~~l~~~L~~~g~~V~~~~r~~--~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||+|+  ||.++++.|+++|++|++++|+.  +....+ ...+++.++.+|++|.+++.++++       ++|+|
T Consensus        28 ~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~l  107 (280)
T 3nrc_A           28 KILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDGLDAI  107 (280)
T ss_dssp             EEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSSCCEE
T ss_pred             EEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5999999977  99999999999999999999987  111111 111358899999999998887764       47999


Q ss_pred             EEeccccCC-----------CCCCcccchhhhhHHHHHHHHHHHhcC--CCcEEEEecccceeccCCCccCCCCCccccc
Q 019878           70 FHTAALVEP-----------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (334)
Q Consensus        70 ih~a~~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~  136 (334)
                      ||+||....           ..+++...+++|+.++.++++++....  ...++|++||...+.....            
T Consensus       108 i~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------  175 (280)
T 3nrc_A          108 VHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPS------------  175 (280)
T ss_dssp             EECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCTT------------
T ss_pred             EECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCCC------------
Confidence            999997532           222345688999999999999987651  2459999999877643321            


Q ss_pred             cccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHH
Q 019878          137 YFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVD  212 (334)
Q Consensus       137 ~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  212 (334)
                        .+.|+.+|.+.+.+.+.+.    ++|+++..++||.+.++....... ............         ....+..++
T Consensus       176 --~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~---------p~~~~~~pe  243 (280)
T 3nrc_A          176 --YNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISN-FKKMLDYNAMVS---------PLKKNVDIM  243 (280)
T ss_dssp             --THHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTT-HHHHHHHHHHHS---------TTCSCCCHH
T ss_pred             --chhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcc-hHHHHHHHHhcC---------CCCCCCCHH
Confidence              3679999999988887654    468999999999999875321111 122222221111         112367799


Q ss_pred             HHHHHHHHHhhcC---CCCCeEEecC
Q 019878          213 DVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       213 D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      |+|+++..++...   ..|+++++.|
T Consensus       244 dvA~~v~~l~s~~~~~~tG~~i~vdg  269 (280)
T 3nrc_A          244 EVGNTVAFLCSDMATGITGEVVHVDA  269 (280)
T ss_dssp             HHHHHHHHTTSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHhCcccCCcCCcEEEECC
Confidence            9999999998753   3699999964

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.86  E-value=2.7e-21  Score=166.11  Aligned_cols=210  Identities=14%  Similarity=0.045  Sum_probs=152.4

Q ss_pred             cEEEEcCCCh--hhHHHHHHHHhCCCeEEEEEcCCCCCCCC------CCCCCeEEEEcCCCChhhHHHHhc-------CC
Q 019878            2 KILVSGASGY--LGGRLCHALLKQGHSVRALVRRTSDISGL------PSEGALELVYGDVTDYRSLVDACF-------GC   66 (334)
Q Consensus         2 ~ilItG~tG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~~v~~~~~Dl~d~~~~~~~~~-------~~   66 (334)
                      ++|||||+|+  ||.++++.|+++|++|++++|+......+      ....++.++.+|++|.+++.++++       .+
T Consensus         9 ~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   88 (266)
T 3oig_A            9 NIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVGVI   88 (266)
T ss_dssp             EEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHHSCC
T ss_pred             EEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHhCCe
Confidence            5999999998  99999999999999999999875321110      011268999999999998887765       58


Q ss_pred             CEEEEeccccCC----------CCCCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEecccceeccCCCccCCCCCcccc
Q 019878           67 HVIFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEE  135 (334)
Q Consensus        67 d~vih~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~  135 (334)
                      |++||+||....          ..+++...+++|+.++.++++++..... -.++|++||...+.+.+.           
T Consensus        89 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-----------  157 (266)
T 3oig_A           89 HGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPN-----------  157 (266)
T ss_dssp             CEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTT-----------
T ss_pred             eEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCCC-----------
Confidence            999999997431          1123456789999999999999988632 248999999876643221           


Q ss_pred             ccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeH
Q 019878          136 KYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHV  211 (334)
Q Consensus       136 ~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  211 (334)
                         .+.|+.+|++.+.+.+.+.    ++|+++..++||.+..+....... ............+         ...+..+
T Consensus       158 ---~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~---------~~~~~~p  224 (266)
T 3oig_A          158 ---YNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISD-FNSILKDIEERAP---------LRRTTTP  224 (266)
T ss_dssp             ---THHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTT-HHHHHHHHHHHST---------TSSCCCH
T ss_pred             ---cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccc-hHHHHHHHHhcCC---------CCCCCCH
Confidence               3679999999888877654    458999999999998864322111 1122222221111         1236789


Q ss_pred             HHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          212 DDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       212 ~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +|+|+++..++...   ..|+++++.|
T Consensus       225 ~dva~~v~~l~s~~~~~~tG~~i~vdG  251 (266)
T 3oig_A          225 EEVGDTAAFLFSDMSRGITGENLHVDS  251 (266)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHcCCchhcCcCCEEEECC
Confidence            99999999998753   3699999964

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.86  E-value=1.5e-21  Score=167.22  Aligned_cols=208  Identities=16%  Similarity=0.181  Sum_probs=147.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CC-CCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+....+    .. ..++.++.+|++|.+++.++++       ++|+|
T Consensus         9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   88 (262)
T 1zem_A            9 VCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFL   88 (262)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            599999999999999999999999999999976432211    00 1268899999999998877665       68999


Q ss_pred             EEecccc-CC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           70 FHTAALV-EP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        70 ih~a~~~-~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      ||+||.. ..      ..+++...+++|+.++.++++++.+.   .+..++|++||...+...+.              .
T Consensus        89 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  154 (262)
T 1zem_A           89 FNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPN--------------M  154 (262)
T ss_dssp             EECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTT--------------B
T ss_pred             EECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCC--------------C
Confidence            9999964 21      12234568899999999999998764   13569999999876643221              3


Q ss_pred             ChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCchhHH---------------HH-HHHHHHcCCCCccc
Q 019878          140 TQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLV---------------AK-LMIERFNGRLPGYI  199 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~~~~---------------~~-~~~~~~~~~~~~~~  199 (334)
                      ..|+.+|.+.+.+.+.+    .++|+++.+++||.+..+..   ....               .. ........ .    
T Consensus       155 ~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----  226 (262)
T 1zem_A          155 AAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFM---WERQVELQAKVGSQYFSTDPKVVAQQMIGS-V----  226 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHH---HHHHHHHHHHHTCTTSCSSHHHHHHHHHHT-S----
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchh---hhhccchhhhccccccccCHHHHHHHHHhc-C----
Confidence            67999999887776654    35699999999999876521   0100               00 00101111 1    


Q ss_pred             cCCCCceeeeeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          200 GYGNDRFSFCHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       200 ~~~~~~~~~i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                          ....+...+|+|+++..++...   ..|+++.+.|
T Consensus       227 ----p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdG  261 (262)
T 1zem_A          227 ----PMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAG  261 (262)
T ss_dssp             ----TTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESC
T ss_pred             ----CCCCCcCHHHHHHHHHHHcCchhcCcCCcEEecCC
Confidence                1123678999999999988653   3688888854

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.86  E-value=2.7e-20  Score=161.37  Aligned_cols=201  Identities=18%  Similarity=0.187  Sum_probs=148.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC------------CCCeEEEEcCCCChhhHHHHhc-----
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------------EGALELVYGDVTDYRSLVDACF-----   64 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------------~~~v~~~~~Dl~d~~~~~~~~~-----   64 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.++...+..            ..++.++.+|++|.+++.++++     
T Consensus        11 ~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   90 (285)
T 3sc4_A           11 TMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTVEQ   90 (285)
T ss_dssp             EEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            59999999999999999999999999999999876544321            1368999999999998887775     


Q ss_pred             --CCCEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC---CCcEEEEecccceeccCCCccCCCCCcc
Q 019878           65 --GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVH  133 (334)
Q Consensus        65 --~~d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~~~~~~e~~~~  133 (334)
                        ++|++||+||....      ..++++..+++|+.++.++++++.+..   +..++|++||...+....          
T Consensus        91 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~----------  160 (285)
T 3sc4_A           91 FGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKW----------  160 (285)
T ss_dssp             HSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGG----------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCC----------
Confidence              69999999997432      112345678899999999999998763   346999999976554320          


Q ss_pred             ccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeee
Q 019878          134 EEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFC  209 (334)
Q Consensus       134 ~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  209 (334)
                         .....|+.+|++.+.+.+.+.    ++|+++..++||.+...      .    +.........        ....+.
T Consensus       161 ---~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t------~----~~~~~~~~~~--------~~~r~~  219 (285)
T 3sc4_A          161 ---LRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVAT------A----AVQNLLGGDE--------AMARSR  219 (285)
T ss_dssp             ---SCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCC------H----HHHHHHTSCC--------CCTTCB
T ss_pred             ---CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCcccc------H----HHHhhccccc--------cccCCC
Confidence               012679999999988887754    35899999999953321      1    1222222211        122467


Q ss_pred             eHHHHHHHHHHHhhcCC--CCCeEEe
Q 019878          210 HVDDVVDGHIAAMEKGR--SGERYLL  233 (334)
Q Consensus       210 ~v~D~a~a~~~~~~~~~--~g~~~~i  233 (334)
                      ..+|+|+++..++..+.  .|+++.+
T Consensus       220 ~pedvA~~~~~l~s~~~~~tG~~i~~  245 (285)
T 3sc4_A          220 KPEVYADAAYVVLNKPSSYTGNTLLC  245 (285)
T ss_dssp             CTHHHHHHHHHHHTSCTTCCSCEEEH
T ss_pred             CHHHHHHHHHHHhCCcccccceEEEE
Confidence            89999999999998653  4555554

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.86  E-value=7.3e-22  Score=171.04  Aligned_cols=212  Identities=18%  Similarity=0.166  Sum_probs=152.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc------CCCEEEEe-
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF------GCHVIFHT-   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~------~~d~vih~-   72 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.++...+..  ..++.++.+|++|.+++.++++      ++|++||+ 
T Consensus        32 ~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv~~a  111 (281)
T 3ppi_A           32 SAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAVVAH  111 (281)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEEEECC
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEEEcc
Confidence            49999999999999999999999999999998654321110  1268999999999999888775      48999999 


Q ss_pred             ccccCC-----------CCCCcccchhhhhHHHHHHHHHHHhcC---------CCcEEEEecccceeccCCCccCCCCCc
Q 019878           73 AALVEP-----------WLPDPSRFFAVNVEGLKNVVQAAKETK---------TVEKIIYTSSFFALGSTDGYIADENQV  132 (334)
Q Consensus        73 a~~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~~v~~Ss~~v~~~~~~~~~~e~~~  132 (334)
                      |+....           ..+++...+++|+.++.++++++....         +..++|++||...+.....        
T Consensus       112 ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------  183 (281)
T 3ppi_A          112 GGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIG--------  183 (281)
T ss_dssp             CCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCTT--------
T ss_pred             CcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCCC--------
Confidence            544211           111246688999999999999887431         2358999999877654321        


Q ss_pred             cccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceee
Q 019878          133 HEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSF  208 (334)
Q Consensus       133 ~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (334)
                            ...|+.+|.+.+.+.+.+.    .+|+++..++||.+..+....   .............+.        ...+
T Consensus       184 ------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~---~~~~~~~~~~~~~~~--------~~~~  246 (281)
T 3ppi_A          184 ------QTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMES---VGEEALAKFAANIPF--------PKRL  246 (281)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT---TCHHHHHHHHHTCCS--------SSSC
T ss_pred             ------CcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhc---ccHHHHHHHHhcCCC--------CCCC
Confidence                  3679999998887776654    458999999999997652111   111222222222111        1347


Q ss_pred             eeHHHHHHHHHHHhhcCC-CCCeEEec-CCCC
Q 019878          209 CHVDDVVDGHIAAMEKGR-SGERYLLT-GENA  238 (334)
Q Consensus       209 i~v~D~a~a~~~~~~~~~-~g~~~~i~-g~~~  238 (334)
                      .+++|+|+++..++.... .|+++++. |..+
T Consensus       247 ~~pedvA~~v~~l~s~~~~tG~~i~vdGG~~~  278 (281)
T 3ppi_A          247 GTPDEFADAAAFLLTNGYINGEVMRLDGAQRF  278 (281)
T ss_dssp             BCHHHHHHHHHHHHHCSSCCSCEEEESTTCCC
T ss_pred             CCHHHHHHHHHHHHcCCCcCCcEEEECCCccc
Confidence            889999999999998654 69999996 4544

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.86  E-value=1.7e-20  Score=156.61  Aligned_cols=209  Identities=17%  Similarity=0.159  Sum_probs=153.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc---CCCEEEEeccccCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF---GCHVIFHTAALVEP   78 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~---~~d~vih~a~~~~~   78 (334)
                      ++|||||++.||.++++.|++.|++|++.+|+.+....... .++..+.+|++|.+++.++++   ++|++||+||...+
T Consensus        13 ~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAGi~~~   91 (242)
T 4b79_A           13 QVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRH-PRIRREELDITDSQRLQRLFEALPRLDVLVNNAGISRD   91 (242)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCC-TTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCCCG
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhc-CCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence            58999999999999999999999999999999876654333 479999999999999888775   48999999997543


Q ss_pred             ----CCCCcccchhhhhHHHHHHHHHHHhcC--CCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHH
Q 019878           79 ----WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKI  152 (334)
Q Consensus        79 ----~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~  152 (334)
                          ..++++..+++|+.++..+.+++.++.  +-.++|++||.......+.              ...|+.||.....+
T Consensus        92 ~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~--------------~~~Y~asKaav~~l  157 (242)
T 4b79_A           92 REEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSAD--------------RPAYSASKGAIVQL  157 (242)
T ss_dssp             GGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCSS--------------CHHHHHHHHHHHHH
T ss_pred             cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCCC--------------CHHHHHHHHHHHHH
Confidence                223566788999999999998886541  1258999999765543222              26699999977665


Q ss_pred             HHH----HhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcC---
Q 019878          153 ALQ----AASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG---  225 (334)
Q Consensus       153 ~~~----~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~---  225 (334)
                      .+.    +.++|+++..+-||.+..|....... -.....+..+..+..         -+...+|+|.+++.++...   
T Consensus       158 tr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~-~~~~~~~~~~~~Plg---------R~g~peeiA~~v~fLaSd~a~~  227 (242)
T 4b79_A          158 TRSLACEYAAERIRVNAIAPGWIDTPLGAGLKA-DVEATRRIMQRTPLA---------RWGEAPEVASAAAFLCGPGASF  227 (242)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCCC-----CC-CHHHHHHHHHTCTTC---------SCBCHHHHHHHHHHHTSGGGTT
T ss_pred             HHHHHHHhhhcCeEEEEEEeCCCCChhhhcccC-CHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHhCchhcC
Confidence            554    55679999999999998764211100 012222222332221         2556899999999998653   


Q ss_pred             CCCCeEEecC
Q 019878          226 RSGERYLLTG  235 (334)
Q Consensus       226 ~~g~~~~i~g  235 (334)
                      -+|+++.+.|
T Consensus       228 iTG~~l~VDG  237 (242)
T 4b79_A          228 VTGAVLAVDG  237 (242)
T ss_dssp             CCSCEEEEST
T ss_pred             ccCceEEECc
Confidence            3688998864

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.86  E-value=6.7e-22  Score=166.60  Aligned_cols=191  Identities=21%  Similarity=0.128  Sum_probs=141.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+....+..  ..++.++.+|++|.+++.++++       .+|++||+
T Consensus         5 ~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnn   84 (235)
T 3l6e_A            5 HIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVLHC   84 (235)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEEEC
Confidence            49999999999999999999999999999998654321110  0158899999999998877765       58999999


Q ss_pred             ccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC--CCcEEEEecccceeccCCCccCCCCCccccccccChHHH
Q 019878           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (334)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (334)
                      ||....      ..++++..+++|+.++.++++++....  ...++|++||...+.....              ...|+.
T Consensus        85 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------~~~Y~a  150 (235)
T 3l6e_A           85 AGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKAN--------------ESLYCA  150 (235)
T ss_dssp             CCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCSS--------------HHHHHH
T ss_pred             CCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCCC--------------CcHHHH
Confidence            997432      223456688999999999999986541  1139999999776543221              367999


Q ss_pred             HHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHH
Q 019878          145 SKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIA  220 (334)
Q Consensus       145 sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~  220 (334)
                      ||.+.+.+.+.+.    .+|+++..++||.+..+.....            ...         ....++.++|+|++++.
T Consensus       151 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~------------~~~---------~~~~~~~pedvA~~v~~  209 (235)
T 3l6e_A          151 SKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNT------------DHV---------DPSGFMTPEDAAAYMLD  209 (235)
T ss_dssp             HHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC--------------------------------CBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhcc------------CCC---------CCcCCCCHHHHHHHHHH
Confidence            9999998888765    3589999999999976532110            000         11247889999999999


Q ss_pred             HhhcCCC
Q 019878          221 AMEKGRS  227 (334)
Q Consensus       221 ~~~~~~~  227 (334)
                      ++..+..
T Consensus       210 l~~~~~~  216 (235)
T 3l6e_A          210 ALEARSS  216 (235)
T ss_dssp             HTCCCSS
T ss_pred             HHhCCCC
Confidence            9986554

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.86  E-value=3.6e-21  Score=167.27  Aligned_cols=207  Identities=15%  Similarity=0.119  Sum_probs=149.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCC-CCCCC----C--CCCCCeEEEEcCCCC----hhhHHHHhc-----
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISG----L--PSEGALELVYGDVTD----YRSLVDACF-----   64 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~----~--~~~~~v~~~~~Dl~d----~~~~~~~~~-----   64 (334)
                      +++|||||+|+||.++++.|+++|++|++++|+. +....    +  ....++.++.+|++|    .+++.++++     
T Consensus        24 k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~  103 (288)
T 2x9g_A           24 PAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFRA  103 (288)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHHHh
Confidence            3699999999999999999999999999999987 32211    0  011268899999999    887777664     


Q ss_pred             --CCCEEEEeccccCCC-------C---------CCcccchhhhhHHHHHHHHHHHhcC---C------CcEEEEecccc
Q 019878           65 --GCHVIFHTAALVEPW-------L---------PDPSRFFAVNVEGLKNVVQAAKETK---T------VEKIIYTSSFF  117 (334)
Q Consensus        65 --~~d~vih~a~~~~~~-------~---------~~~~~~~~~n~~~~~~l~~~~~~~~---~------~~~~v~~Ss~~  117 (334)
                        ++|+|||+||.....       .         +++...+++|+.++.++++++.+..   +      ..++|++||..
T Consensus       104 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~  183 (288)
T 2x9g_A          104 FGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAM  183 (288)
T ss_dssp             HSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEECCTT
T ss_pred             cCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEeccc
Confidence              689999999974321       1         1234578899999999999987652   1      35899999987


Q ss_pred             eeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcC
Q 019878          118 ALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNG  193 (334)
Q Consensus       118 v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~  193 (334)
                      .+.+..              ....|+.+|++.+.+.+.+.    ++|+++.+++||.++++. .. .   ..........
T Consensus       184 ~~~~~~--------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~~-~---~~~~~~~~~~  244 (288)
T 2x9g_A          184 VDQPCM--------------AFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-AM-G---EEEKDKWRRK  244 (288)
T ss_dssp             TTSCCT--------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-TS-C---HHHHHHHHHT
T ss_pred             ccCCCC--------------CCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-cc-C---hHHHHHHHhh
Confidence            765322              13679999998887776654    458999999999999986 21 1   1111222222


Q ss_pred             CCCccccCCCCceee-eeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          194 RLPGYIGYGNDRFSF-CHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       194 ~~~~~~~~~~~~~~~-i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      .+.         ..+ ..++|+|++++.++...   ..|+++++.|
T Consensus       245 ~p~---------~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdG  281 (288)
T 2x9g_A          245 VPL---------GRREASAEQIADAVIFLVSGSAQYITGSIIKVDG  281 (288)
T ss_dssp             CTT---------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCC---------CCCCCCHHHHHHHHHHHhCccccCccCCEEEECc
Confidence            111         124 67999999999998753   3688998864

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.86  E-value=9.9e-22  Score=170.38  Aligned_cols=208  Identities=16%  Similarity=0.164  Sum_probs=149.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC---eEEEEEcCCCCCCCCC-------CCCCeEEEEcCCCChhhHHHHhc-------
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH---SVRALVRRTSDISGLP-------SEGALELVYGDVTDYRSLVDACF-------   64 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~-------~~~~v~~~~~Dl~d~~~~~~~~~-------   64 (334)
                      ++|||||+|+||.++++.|+++|+   +|++++|+.+....+.       ...++.++.+|++|.+++.++++       
T Consensus        35 ~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  114 (287)
T 3rku_A           35 TVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFK  114 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCGGGC
T ss_pred             EEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            599999999999999999999887   9999999865432210       01268899999999999988875       


Q ss_pred             CCCEEEEeccccCC-------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccc
Q 019878           65 GCHVIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHE  134 (334)
Q Consensus        65 ~~d~vih~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~  134 (334)
                      ++|+|||+||....       ..++++..+++|+.++.++++++...   .+..++|++||...+.....          
T Consensus       115 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~----------  184 (287)
T 3rku_A          115 DIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPT----------  184 (287)
T ss_dssp             SCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT----------
T ss_pred             CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCC----------
Confidence            48999999997431       12245678899999999999998432   14569999999876543221          


Q ss_pred             cccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeee
Q 019878          135 EKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCH  210 (334)
Q Consensus       135 ~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  210 (334)
                          .+.|+.+|.+.+.+.+.+.    ++|+++..++||.|..+...................            ..++.
T Consensus       185 ----~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~------------~~p~~  248 (287)
T 3rku_A          185 ----GSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKD------------TTPLM  248 (287)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTT------------SCCEE
T ss_pred             ----CchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcc------------cCCCC
Confidence                3679999999998887765    358999999999998762100000000111111111            12348


Q ss_pred             HHHHHHHHHHHhhcCC---CCCeEEecC
Q 019878          211 VDDVVDGHIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       211 v~D~a~a~~~~~~~~~---~g~~~~i~g  235 (334)
                      ++|+|++++.++..+.   .|+++++.+
T Consensus       249 pedvA~~v~~l~s~~~~~i~g~~i~v~~  276 (287)
T 3rku_A          249 ADDVADLIVYATSRKQNTVIADTLIFPT  276 (287)
T ss_dssp             HHHHHHHHHHHHTSCTTEEEEEEEEEET
T ss_pred             HHHHHHHHHHHhCCCCCeEecceEEeeC
Confidence            9999999999998764   377888864

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.86  E-value=4.1e-22  Score=169.10  Aligned_cols=202  Identities=20%  Similarity=0.207  Sum_probs=133.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhH---HHHh---cCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSL---VDAC---FGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~---~~~~---~~~d~vih~a~~   75 (334)
                      ++|||||+|+||.++++.|++ |+.|++++|+++....+....++.++.+|+.+.+..   .+.+   .++|+|||+||.
T Consensus         7 ~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~~Ag~   85 (245)
T 3e9n_A            7 IAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVHAAAV   85 (245)
T ss_dssp             EEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEECC--
T ss_pred             EEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEEEECCCc
Confidence            599999999999999999987 899999999865433322234689999999887541   2222   258999999997


Q ss_pred             cCC------CCCCcccchhhhhHHHHHHHHHHHhcC--CCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHH
Q 019878           76 VEP------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (334)
Q Consensus        76 ~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~  147 (334)
                      ...      ..+++...+++|+.++.++++++....  ...++|++||...+.+...              .+.|+.+|.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~Y~asK~  151 (245)
T 3e9n_A           86 ARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPHPG--------------NTIYAASKH  151 (245)
T ss_dssp             --------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC------------------------CHHHHHHHH
T ss_pred             CCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCCCC--------------chHHHHHHH
Confidence            432      112345678999999888888875421  1259999999887764321              367999999


Q ss_pred             HHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhh
Q 019878          148 VADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAME  223 (334)
Q Consensus       148 ~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~  223 (334)
                      +.+.+.+.+.    .+|+++.+++||.+.++....       .....  +       .......+++++|+|+++..++.
T Consensus       152 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-------~~~~~--~-------~~~~~~~~~~p~dvA~~i~~l~~  215 (245)
T 3e9n_A          152 ALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQG-------LMDSQ--G-------TNFRPEIYIEPKEIANAIRFVID  215 (245)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------------CCGGGSCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhh-------hhhhh--h-------cccccccCCCHHHHHHHHHHHHc
Confidence            9998887754    358999999999998874211       11000  0       01122357899999999999999


Q ss_pred             cCCCCCeEEec
Q 019878          224 KGRSGERYLLT  234 (334)
Q Consensus       224 ~~~~g~~~~i~  234 (334)
                      .+..+.++++.
T Consensus       216 ~~~~~~~~~i~  226 (245)
T 3e9n_A          216 AGETTQITNVD  226 (245)
T ss_dssp             SCTTEEEEEEE
T ss_pred             CCCccceeeeE
Confidence            88888888874

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.86  E-value=4.4e-21  Score=162.87  Aligned_cols=198  Identities=18%  Similarity=0.215  Sum_probs=142.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+....+.     ...++.++.+|++|.+++.++++       ++|+|
T Consensus         9 ~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l   88 (247)
T 2jah_A            9 VALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDIL   88 (247)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5999999999999999999999999999999864322110     01268899999999998887764       68999


Q ss_pred             EEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        70 ih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      ||+||....      ..+++...+++|+.++.++++++.+.   .+ .++|++||...+....              ...
T Consensus        89 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~--------------~~~  153 (247)
T 2jah_A           89 VNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVR--------------NAA  153 (247)
T ss_dssp             EECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCT--------------TCH
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCC--------------CCc
Confidence            999997432      11234567899999999999998653   13 6999999987664322              136


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCch-hHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTG-NLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      .|+.+|.+.+.+.+.+.    ++|+++++++||.+.++...... ......+..    . +       .+..++..+|+|
T Consensus       154 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~----~-~-------~~~~~~~pedvA  221 (247)
T 2jah_A          154 VYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYEQ----R-I-------SQIRKLQAQDIA  221 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHHHHHHH----H-T-------TTSCCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhHHHHHh----c-c-------cccCCCCHHHHH
Confidence            79999998887776643    46999999999999876421110 111111111    0 0       011257899999


Q ss_pred             HHHHHHhhcCC
Q 019878          216 DGHIAAMEKGR  226 (334)
Q Consensus       216 ~a~~~~~~~~~  226 (334)
                      +++..++..+.
T Consensus       222 ~~v~~l~s~~~  232 (247)
T 2jah_A          222 EAVRYAVTAPH  232 (247)
T ss_dssp             HHHHHHHHSCT
T ss_pred             HHHHHHhCCCc
Confidence            99999998653

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.86  E-value=7.4e-22  Score=169.48  Aligned_cols=210  Identities=18%  Similarity=0.143  Sum_probs=147.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC-CCCC----C-CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISGL----P-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~----~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+|+||.++++.|+++|++|++.+++... ...+    . ...++.++.+|++|.+++.++++       ++|+
T Consensus        29 ~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~  108 (267)
T 3u5t_A           29 VAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDV  108 (267)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            49999999999999999999999999998654431 1110    0 01368899999999998887775       6899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEecccceeccCCCccCCCCCccccccccCh
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  141 (334)
                      +||+||....      ..++++..+++|+.++.++++++.+... ..++|++||...+...+.              ...
T Consensus       109 lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~  174 (267)
T 3u5t_A          109 LVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPS--------------YGI  174 (267)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTT--------------CHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCC--------------chH
Confidence            9999997432      1123456788999999999999987521 248999999876653321              367


Q ss_pred             HHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHH
Q 019878          142 YERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDG  217 (334)
Q Consensus       142 Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  217 (334)
                      |+.+|.+.+.+.+.+.    ++|+++..++||.+..+.....   ...-........        .....+..++|+|++
T Consensus       175 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~--------~p~~r~~~pedvA~~  243 (267)
T 3u5t_A          175 YAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEG---KSDEVRDRFAKL--------APLERLGTPQDIAGA  243 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC--------------CHHHHHTS--------STTCSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCcccccc---CCHHHHHHHHhc--------CCCCCCcCHHHHHHH
Confidence            9999999998888765    3489999999999987642110   001011111111        122357789999999


Q ss_pred             HHHHhhcCC---CCCeEEecCC
Q 019878          218 HIAAMEKGR---SGERYLLTGE  236 (334)
Q Consensus       218 ~~~~~~~~~---~g~~~~i~g~  236 (334)
                      +..++....   .|+++++.|.
T Consensus       244 v~~L~s~~~~~itG~~i~vdGG  265 (267)
T 3u5t_A          244 VAFLAGPDGAWVNGQVLRANGG  265 (267)
T ss_dssp             HHHHHSTTTTTCCSEEEEESSS
T ss_pred             HHHHhCccccCccCCEEEeCCC
Confidence            999987542   6889998653

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.86  E-value=1.3e-21  Score=167.55  Aligned_cols=199  Identities=22%  Similarity=0.206  Sum_probs=140.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+....+.     ....+.++.+|++|.+++.++++       ++|++
T Consensus         6 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   85 (264)
T 3tfo_A            6 VILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDVL   85 (264)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5999999999999999999999999999999865322110     01268889999999998877764       68999


Q ss_pred             EEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        70 ih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      ||+||....      ..+++...+++|+.++.++++++...   .+..++|++||...+.....              ..
T Consensus        86 VnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~--------------~~  151 (264)
T 3tfo_A           86 VNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPT--------------AA  151 (264)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT--------------CH
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCC--------------Ch
Confidence            999997432      22345668899999999988887553   14569999999877654321              36


Q ss_pred             hHHHHHHHHHHHHHHHhhc--CCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHH
Q 019878          141 QYERSKAVADKIALQAASE--GLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGH  218 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~~~--g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  218 (334)
                      .|+.+|.+.+.+.+.+...  |+++..++||.+..+.....   ...        .......  ...+.++..+|+|+++
T Consensus       152 ~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~---~~~--------~~~~~~~--~~~~~~~~pedvA~~v  218 (264)
T 3tfo_A          152 VYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTI---THE--------ETMAAMD--TYRAIALQPADIARAV  218 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC------------------------------------CCCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccc---cch--------hHHHHHH--hhhccCCCHHHHHHHH
Confidence            6999999999988887643  89999999999987632110   000        0000000  0111246899999999


Q ss_pred             HHHhhcCCC
Q 019878          219 IAAMEKGRS  227 (334)
Q Consensus       219 ~~~~~~~~~  227 (334)
                      ..++..+..
T Consensus       219 ~~l~s~~~~  227 (264)
T 3tfo_A          219 RQVIEAPQS  227 (264)
T ss_dssp             HHHHHSCTT
T ss_pred             HHHhcCCcc
Confidence            999998754

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.85  E-value=7.4e-21  Score=168.03  Aligned_cols=207  Identities=17%  Similarity=0.134  Sum_probs=150.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEE-cCCCCCCCC------CCCCCeEEEEcCCCChh-----------------
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALV-RRTSDISGL------PSEGALELVYGDVTDYR-----------------   57 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~------~~~~~v~~~~~Dl~d~~-----------------   57 (334)
                      ++|||||+|+||.++++.|+++|++|++++ |+.+....+      ....++.++.+|++|.+                 
T Consensus        48 ~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~  127 (328)
T 2qhx_A           48 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFT  127 (328)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCBCHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccccccHH
Confidence            599999999999999999999999999999 875432110      00126899999999998                 


Q ss_pred             hHHHHhc-------CCCEEEEeccccCCC--------------------CCCcccchhhhhHHHHHHHHHHHhc---CC-
Q 019878           58 SLVDACF-------GCHVIFHTAALVEPW--------------------LPDPSRFFAVNVEGLKNVVQAAKET---KT-  106 (334)
Q Consensus        58 ~~~~~~~-------~~d~vih~a~~~~~~--------------------~~~~~~~~~~n~~~~~~l~~~~~~~---~~-  106 (334)
                      ++.++++       .+|+|||+||.....                    .+++...+++|+.++.++++++.+.   .+ 
T Consensus       128 ~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~  207 (328)
T 2qhx_A          128 RCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPA  207 (328)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSCG
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            8777765       689999999974321                    1223457899999999999988753   12 


Q ss_pred             -----CcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCC
Q 019878          107 -----VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKL  177 (334)
Q Consensus       107 -----~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~  177 (334)
                           ..++|++||...+....              ....|+.+|.+.+.+.+.+.    ++|+++.+++||.+.++. .
T Consensus       208 ~~~~~~g~IV~isS~~~~~~~~--------------~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~  272 (328)
T 2qhx_A          208 KHRGTNYSIINMVDAMTNQPLL--------------GYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D  272 (328)
T ss_dssp             GGSCSCEEEEEECCTTTTSCCT--------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-C
T ss_pred             cCCCCCcEEEEECchhhccCCC--------------CcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-c
Confidence                 56999999987664322              13679999999988887754    458999999999999886 2


Q ss_pred             CchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          178 TTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      ..    .......... .+.  +     ..+..++|+|++++.++...   ..|+++++.|
T Consensus       273 ~~----~~~~~~~~~~-~p~--~-----~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdG  321 (328)
T 2qhx_A          273 MP----PAVWEGHRSK-VPL--Y-----QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDG  321 (328)
T ss_dssp             SC----HHHHHHHHTT-CTT--T-----TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cc----HHHHHHHHhh-CCC--C-----CCCCCHHHHHHHHHHHhCccccCccCcEEEECC
Confidence            21    1222222221 110  0     03678999999999998643   3689999964

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.85  E-value=3.3e-21  Score=165.44  Aligned_cols=214  Identities=13%  Similarity=0.034  Sum_probs=150.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC-------CCCCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-------PSEGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+.....       ....++.++.+|++|.+++.++++       ++|
T Consensus        10 ~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   89 (265)
T 3lf2_A           10 VAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCAS   89 (265)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCS
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            599999999999999999999999999999986532111       001148999999999998877764       589


Q ss_pred             EEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        68 ~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      ++||+||....      ..+++...+++|+.++.++++++...   .+..++|++||...+.....              
T Consensus        90 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------  155 (265)
T 3lf2_A           90 ILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPH--------------  155 (265)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTT--------------
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCC--------------
Confidence            99999997432      12234568899999999999998654   23468999999876643321              


Q ss_pred             cChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCch------hHHHHHHHHHHcCCCCccccCCCCceee
Q 019878          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTG------NLVAKLMIERFNGRLPGYIGYGNDRFSF  208 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (334)
                      ...|+.+|.+.+.+.+.+.    ++|+++..++||.+.++......      ..-...+........      ......+
T Consensus       156 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~p~~r~  229 (265)
T 3lf2_A          156 MVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNK------QIPLGRL  229 (265)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHT------TCTTCSC
T ss_pred             chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhcc------CCCcCCC
Confidence            3679999999888777654    45899999999999875210000      000001111111100      0112347


Q ss_pred             eeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          209 CHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       209 i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      ..++|+|+++..++...   -+|+++++.|
T Consensus       230 ~~pedvA~~v~fL~s~~~~~itG~~i~vdG  259 (265)
T 3lf2_A          230 GKPIEAARAILFLASPLSAYTTGSHIDVSG  259 (265)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSEEEEESS
T ss_pred             cCHHHHHHHHHHHhCchhcCcCCCEEEECC
Confidence            78999999999998743   3699999964

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.85  E-value=2.8e-21  Score=164.62  Aligned_cols=206  Identities=18%  Similarity=0.162  Sum_probs=147.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC------CCCeEEEEcCC--CChhhHHHHhc-------CC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------EGALELVYGDV--TDYRSLVDACF-------GC   66 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~v~~~~~Dl--~d~~~~~~~~~-------~~   66 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+....+..      ...+.++.+|+  +|.+++.++++       ++
T Consensus        14 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~i   93 (252)
T 3f1l_A           14 IILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRL   93 (252)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHCSCC
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhCCCC
Confidence            59999999999999999999999999999998654321110      02578999999  88888777664       58


Q ss_pred             CEEEEeccccCC----C---CCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccc
Q 019878           67 HVIFHTAALVEP----W---LPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (334)
Q Consensus        67 d~vih~a~~~~~----~---~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~  136 (334)
                      |++||+||....    .   .++++..+++|+.++.++++++.+.   .+..++|++||...+.....            
T Consensus        94 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~------------  161 (252)
T 3f1l_A           94 DGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRAN------------  161 (252)
T ss_dssp             SEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTT------------
T ss_pred             CEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCC------------
Confidence            999999997421    1   1223568899999999999998432   24579999999876543221            


Q ss_pred             cccChHHHHHHHHHHHHHHHhhc---CCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHH
Q 019878          137 YFCTQYERSKAVADKIALQAASE---GLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       137 ~~~~~Y~~sK~~~E~~~~~~~~~---g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                        ...|+.+|.+.+.+.+.+..+   .+++..+.||.+..+.           .......         .....+..++|
T Consensus       162 --~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~-----------~~~~~~~---------~~~~~~~~p~d  219 (252)
T 3f1l_A          162 --WGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAM-----------RASAFPT---------EDPQKLKTPAD  219 (252)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHH-----------HHHHCTT---------CCGGGSBCTGG
T ss_pred             --CchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCch-----------hhhhCCc---------cchhccCCHHH
Confidence              367999999999988876632   3889999999886431           1111111         11234678999


Q ss_pred             HHHHHHHHhhcC---CCCCeEEec-CCCCCHH
Q 019878          214 VVDGHIAAMEKG---RSGERYLLT-GENASFM  241 (334)
Q Consensus       214 ~a~a~~~~~~~~---~~g~~~~i~-g~~~s~~  241 (334)
                      +++++..++...   ..|+++++. |...++.
T Consensus       220 va~~~~~L~s~~~~~itG~~i~vdgG~~~~~~  251 (252)
T 3f1l_A          220 IMPLYLWLMGDDSRRKTGMTFDAQPGRKPGIS  251 (252)
T ss_dssp             GHHHHHHHHSGGGTTCCSCEEESSCC------
T ss_pred             HHHHHHHHcCccccCCCCCEEEeCCCcCCCCC
Confidence            999999998754   369999995 5555543

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.85  E-value=3.3e-21  Score=165.81  Aligned_cols=208  Identities=15%  Similarity=0.148  Sum_probs=143.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CCCCCCeEEEEcCCCChhhHHHHhcC-------CCEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACFG-------CHVI   69 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~~-------~d~v   69 (334)
                      +++|||||+|+||.++++.|+++|++|++++|+.++...    +....++.++.+|++|.+++.++++.       +|+|
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  101 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL  101 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            369999999999999999999999999999998643221    11112688999999999999888754       5999


Q ss_pred             EEeccccCC-------CCCCcccchhhhhHHHHHHHHHHHhc---CCCc-EEEEecccceeccCCCccCCCCCccccccc
Q 019878           70 FHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVE-KIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        70 ih~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~-~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      ||+||....       ..++++..+++|+.++.++++++.+.   .+.. ++|++||...+....              .
T Consensus       102 vnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~--------------~  167 (272)
T 2nwq_A          102 INNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYP--------------G  167 (272)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCT--------------T
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCC--------------C
Confidence            999997431       11234568899999988887777532   1356 999999987664322              1


Q ss_pred             cChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      ...|+.+|.+.+.+.+.+.    .+|+++.+++||.+.++....   .+..   .  ........    ....++..+|+
T Consensus       168 ~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~---~~~~---~--~~~~~~~~----~~~~~~~pedv  235 (272)
T 2nwq_A          168 SHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLV---RFGG---D--QARYDKTY----AGAHPIQPEDI  235 (272)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC--------------------------------CCCCBCHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhc---cccc---c--hHHHHHhh----ccCCCCCHHHH
Confidence            3679999999999988865    348999999999998764210   0000   0  00000000    01124789999


Q ss_pred             HHHHHHHhhcCC--CCCeEEec
Q 019878          215 VDGHIAAMEKGR--SGERYLLT  234 (334)
Q Consensus       215 a~a~~~~~~~~~--~g~~~~i~  234 (334)
                      |++++.++..+.  .|..+.+.
T Consensus       236 A~~v~~l~s~~~~~~g~~i~v~  257 (272)
T 2nwq_A          236 AETIFWIMNQPAHLNINSLEIM  257 (272)
T ss_dssp             HHHHHHHHTSCTTEEEEEEEEE
T ss_pred             HHHHHHHhCCCccCccceEEEe
Confidence            999999998643  35555553

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.85  E-value=2.9e-21  Score=164.71  Aligned_cols=211  Identities=13%  Similarity=0.086  Sum_probs=142.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC----CCCeEEEEcCCCChhhHHH----HhcCCCEEEEe
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS----EGALELVYGDVTDYRSLVD----ACFGCHVIFHT   72 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~v~~~~~Dl~d~~~~~~----~~~~~d~vih~   72 (334)
                      +++|||||+|+||.++++.|+++|++|++++|+.++...+..    ..++.++  |..+.+.+.+    .+.++|+|||+
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD~lv~n   79 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM--SEQEPAELIEAVTSAYGQVDVLVSN   79 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCCCEEEEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            149999999999999999999999999999998764321100    0123333  5555443322    22369999999


Q ss_pred             cccc-CC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChH
Q 019878           73 AALV-EP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (334)
Q Consensus        73 a~~~-~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y  142 (334)
                      ||.. ..      ..++++..+++|+.++.++++++.+.   .+..++|++||...+....              ....|
T Consensus        80 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------~~~~Y  145 (254)
T 1zmt_A           80 DIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWK--------------ELSTY  145 (254)
T ss_dssp             CCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCT--------------TCHHH
T ss_pred             CCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCC--------------CchHH
Confidence            9975 21      11234568899999999999988532   1356999999987664322              13679


Q ss_pred             HHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCc--hhHH---HHHHHHHHcCCCCccccCCCCceeeeeHHH
Q 019878          143 ERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTT--GNLV---AKLMIERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       143 ~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                      +.+|.+.+.+.+.+.    ++|+++++++|+.++|+.....  ..+.   .......... .        ....+.+++|
T Consensus       146 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~-~--------p~~~~~~p~d  216 (254)
T 1zmt_A          146 TSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKV-T--------ALQRLGTQKE  216 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHH-S--------SSSSCBCHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhcc-C--------CCCCCcCHHH
Confidence            999999988887654    4599999999999988754321  1111   0111111111 1        1123678999


Q ss_pred             HHHHHHHHhhcCC---CCCeEEecCC
Q 019878          214 VVDGHIAAMEKGR---SGERYLLTGE  236 (334)
Q Consensus       214 ~a~a~~~~~~~~~---~g~~~~i~g~  236 (334)
                      +|+++..++....   .|+++++.|.
T Consensus       217 vA~~v~~l~s~~~~~~tG~~~~vdgG  242 (254)
T 1zmt_A          217 LGELVAFLASGSCDYLTGQVFWLAGG  242 (254)
T ss_dssp             HHHHHHHHHTTSCGGGTTCEEEESTT
T ss_pred             HHHHHHHHhCcccCCccCCEEEECCC
Confidence            9999999987543   6899999643

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.85  E-value=2.3e-20  Score=160.64  Aligned_cols=213  Identities=17%  Similarity=0.107  Sum_probs=149.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC-CCC----CC-CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~----~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+|+||.++++.|+++|++|++++++... ...    +. ...++.++.+|++|.+++.++++       ++|+
T Consensus        20 ~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   99 (270)
T 3is3_A           20 VALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDI   99 (270)
T ss_dssp             EEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            59999999999999999999999999998875432 110    00 01368999999999998887775       5899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEecccceeccCCCccCCCCCccccccccCh
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  141 (334)
                      +||+||....      ..++++..+++|+.++.++++++.+... -.++|++||.......             .++.+.
T Consensus       100 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------------~~~~~~  166 (270)
T 3is3_A          100 AVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFS-------------VPKHSL  166 (270)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCC-------------CTTCHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCC-------------CCCCch
Confidence            9999997432      2234566889999999999999988731 2399999997521110             011367


Q ss_pred             HHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCc-------h-hHHHHHHHHHHcCCCCccccCCCCceeee
Q 019878          142 YERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTT-------G-NLVAKLMIERFNGRLPGYIGYGNDRFSFC  209 (334)
Q Consensus       142 Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  209 (334)
                      |+.+|.+.+.+.+.+.    ++|+++..++||.+.++.....       . ..............        .....+.
T Consensus       167 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~p~~r~~  238 (270)
T 3is3_A          167 YSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHA--------SPLHRNG  238 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHH--------STTCSCB
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhc--------CCCCCCC
Confidence            9999999988877654    4589999999999988742100       0 00011111111111        1223467


Q ss_pred             eHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          210 HVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       210 ~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +++|+|+++..++...   -.|+++++.|
T Consensus       239 ~p~dvA~~v~~L~s~~~~~itG~~i~vdG  267 (270)
T 3is3_A          239 WPQDVANVVGFLVSKEGEWVNGKVLTLDG  267 (270)
T ss_dssp             CHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             CHHHHHHHHHHHcCCccCCccCcEEEeCC
Confidence            8999999999998653   3699999964

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.84  E-value=2.5e-21  Score=167.49  Aligned_cols=205  Identities=15%  Similarity=0.071  Sum_probs=144.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC------CCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------EGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+....+..      ...+.++.+|++|.+++.++++       ++|+
T Consensus        35 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  114 (281)
T 4dry_A           35 IALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFARLDL  114 (281)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            59999999999999999999999999999998653321110      0135899999999998877764       5799


Q ss_pred             EEEeccccCC-------CCCCcccchhhhhHHHHHHHHHHHhcC-----CCcEEEEecccceeccCCCccCCCCCccccc
Q 019878           69 IFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK-----TVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (334)
Q Consensus        69 vih~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~  136 (334)
                      |||+||....       ..++++..+++|+.++.++++++.+..     ...++|++||...+....             
T Consensus       115 lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~-------------  181 (281)
T 4dry_A          115 LVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRP-------------  181 (281)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCT-------------
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCC-------------
Confidence            9999997422       123345688999999988888876541     135999999987654322             


Q ss_pred             cccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHH
Q 019878          137 YFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVD  212 (334)
Q Consensus       137 ~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  212 (334)
                       +.+.|+.+|.+.+.+.+.+.    .+|+++..++||.+..+....           .. ...... ........++.++
T Consensus       182 -~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-----------~~-~~~~~~-~~~~~~~~~~~pe  247 (281)
T 4dry_A          182 -NSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTAR-----------MS-TGVLQA-NGEVAAEPTIPIE  247 (281)
T ss_dssp             -TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------------------CEEECT-TSCEEECCCBCHH
T ss_pred             -CChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhh-----------hc-chhhhh-hhcccccCCCCHH
Confidence             13679999999888777654    468999999999997753210           00 000000 0011223478899


Q ss_pred             HHHHHHHHHhhcCCCCCeEEe
Q 019878          213 DVVDGHIAAMEKGRSGERYLL  233 (334)
Q Consensus       213 D~a~a~~~~~~~~~~g~~~~i  233 (334)
                      |+|++++.++..+....+.++
T Consensus       248 dvA~~v~fL~s~~~~~~i~~~  268 (281)
T 4dry_A          248 HIAEAVVYMASLPLSANVLTM  268 (281)
T ss_dssp             HHHHHHHHHHHSCTTEEEEEE
T ss_pred             HHHHHHHHHhCCCccCccccE
Confidence            999999999998766544443

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.84  E-value=8e-22  Score=168.90  Aligned_cols=210  Identities=12%  Similarity=0.103  Sum_probs=144.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC-------CC-CCCCeEEEEcCCCChhhHHHHhc-------CC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-------LP-SEGALELVYGDVTDYRSLVDACF-------GC   66 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~   66 (334)
                      ++|||||+|+||.++++.|+++|++|++++|.....+.       +. ...++.++.+|++|.+++.++++       ++
T Consensus        13 ~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   92 (262)
T 3ksu_A           13 VIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFGKV   92 (262)
T ss_dssp             EEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHHCSE
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            59999999999999999999999999999875432110       00 01368899999999999888775       58


Q ss_pred             CEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           67 HVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        67 d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      |++||+||....      ..++++..+++|+.++.++++++.+.. ...++|++||...+.....              .
T Consensus        93 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~--------------~  158 (262)
T 3ksu_A           93 DIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGF--------------Y  158 (262)
T ss_dssp             EEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCC--------------C
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCC--------------C
Confidence            999999997432      122345678899999999999998752 2358999999877654332              2


Q ss_pred             ChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          140 TQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      ..|+.+|.+.+.+.+.+.    ++|+++..++||.+..+......           ................+..++|+|
T Consensus       159 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-----------~~~~~~~~~~~~~~~r~~~pedvA  227 (262)
T 3ksu_A          159 STYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQE-----------TKESTAFHKSQAMGNQLTKIEDIA  227 (262)
T ss_dssp             CC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC-----------------------CCCCSCCGGGTH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC-----------chHHHHHHHhcCcccCCCCHHHHH
Confidence            569999999998888765    34899999999998654210000           000000111112233477899999


Q ss_pred             HHHHHHhhcC--CCCCeEEecCC
Q 019878          216 DGHIAAMEKG--RSGERYLLTGE  236 (334)
Q Consensus       216 ~a~~~~~~~~--~~g~~~~i~g~  236 (334)
                      +++..++...  -.|+++++.|.
T Consensus       228 ~~v~~L~s~~~~itG~~i~vdGg  250 (262)
T 3ksu_A          228 PIIKFLTTDGWWINGQTIFANGG  250 (262)
T ss_dssp             HHHHHHHTTTTTCCSCEEEESTT
T ss_pred             HHHHHHcCCCCCccCCEEEECCC
Confidence            9999998752  25999999653

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.84  E-value=3.7e-21  Score=167.03  Aligned_cols=194  Identities=15%  Similarity=0.125  Sum_probs=141.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC------CCCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP------SEGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      ++||||||+|+||.++++.|+++|++|++++|++++...+.      ...++.++.+|++|.+++.++++       ++|
T Consensus        29 k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD  108 (286)
T 1xu9_A           29 KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLD  108 (286)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            46999999999999999999999999999999865432111      00258899999999988877765       699


Q ss_pred             EEEEe-ccccCCC-----CCCcccchhhhhHHHHHHHHHHHhcC--CCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           68 VIFHT-AALVEPW-----LPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        68 ~vih~-a~~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      +|||+ |+.....     .++....+++|+.++.++++++.+..  ..+++|++||...+.+.+              +.
T Consensus       109 ~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------~~  174 (286)
T 1xu9_A          109 MLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYP--------------MV  174 (286)
T ss_dssp             EEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCT--------------TC
T ss_pred             EEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCC--------------Cc
Confidence            99999 5653221     12235578999999999999886531  135999999987664322              13


Q ss_pred             ChHHHHHHHHHHHHHHHh------hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHH
Q 019878          140 TQYERSKAVADKIALQAA------SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~------~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                      +.|+.+|.+.+.+.+.+.      ..|+++++++||.+.++.       .    .....+         .....+++++|
T Consensus       175 ~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~-------~----~~~~~~---------~~~~~~~~~~~  234 (286)
T 1xu9_A          175 AAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET-------A----MKAVSG---------IVHMQAAPKEE  234 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH-------H----HHHSCG---------GGGGGCBCHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChh-------H----HHhccc---------cccCCCCCHHH
Confidence            679999999988877643      248999999999986541       1    111111         11235789999


Q ss_pred             HHHHHHHHhhcCCCC
Q 019878          214 VVDGHIAAMEKGRSG  228 (334)
Q Consensus       214 ~a~a~~~~~~~~~~g  228 (334)
                      +|++++.++..+..+
T Consensus       235 vA~~i~~~~~~~~~~  249 (286)
T 1xu9_A          235 CALEIIKGGALRQEE  249 (286)
T ss_dssp             HHHHHHHHHHTTCSE
T ss_pred             HHHHHHHHHhcCCce
Confidence            999999999875443

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.84  E-value=6.3e-20  Score=158.15  Aligned_cols=198  Identities=17%  Similarity=0.171  Sum_probs=144.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC------------CCCeEEEEcCCCChhhHHHHhc-----
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------------EGALELVYGDVTDYRSLVDACF-----   64 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------------~~~v~~~~~Dl~d~~~~~~~~~-----   64 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.++...+..            ..++.++.+|++|.+++.++++     
T Consensus         8 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   87 (274)
T 3e03_A            8 TLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATVDT   87 (274)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            59999999999999999999999999999999876544322            1367899999999998877764     


Q ss_pred             --CCCEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcc
Q 019878           65 --GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVH  133 (334)
Q Consensus        65 --~~d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~  133 (334)
                        ++|++||+||....      ..++++..+++|+.++.++++++...   .+..++|++||...+....          
T Consensus        88 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~----------  157 (274)
T 3e03_A           88 FGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAW----------  157 (274)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHH----------
T ss_pred             cCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC----------
Confidence              58999999997432      11234568899999999999998654   2346999999987654311          


Q ss_pred             ccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeee
Q 019878          134 EEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFC  209 (334)
Q Consensus       134 ~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  209 (334)
                        ......|+.+|.+.+.+.+.+.    ++|+++..++||.+....      +.     +...+.         ....+.
T Consensus       158 --~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~------~~-----~~~~~~---------~~~~~~  215 (274)
T 3e03_A          158 --WGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATD------AI-----NMLPGV---------DAAACR  215 (274)
T ss_dssp             --HHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC------------------CC---------CGGGSB
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccc------hh-----hhcccc---------cccccC
Confidence              1113679999998888777654    458999999999543321      00     111111         122367


Q ss_pred             eHHHHHHHHHHHhhcCC---CCCeE
Q 019878          210 HVDDVVDGHIAAMEKGR---SGERY  231 (334)
Q Consensus       210 ~v~D~a~a~~~~~~~~~---~g~~~  231 (334)
                      ..+|+|+++..++....   +|+++
T Consensus       216 ~pedvA~~v~~l~s~~~~~itG~~i  240 (274)
T 3e03_A          216 RPEIMADAAHAVLTREAAGFHGQFL  240 (274)
T ss_dssp             CTHHHHHHHHHHHTSCCTTCCSCEE
T ss_pred             CHHHHHHHHHHHhCccccccCCeEE
Confidence            89999999999997643   46666

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.84  E-value=1.5e-19  Score=160.50  Aligned_cols=201  Identities=17%  Similarity=0.155  Sum_probs=148.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC------------CCCeEEEEcCCCChhhHHHHhc-----
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------------EGALELVYGDVTDYRSLVDACF-----   64 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------------~~~v~~~~~Dl~d~~~~~~~~~-----   64 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.++...+..            ..++.++.+|++|.+++.++++     
T Consensus        47 ~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~  126 (346)
T 3kvo_A           47 TVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIKK  126 (346)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             EEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            59999999999999999999999999999999876544321            1368899999999998887775     


Q ss_pred             --CCCEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcc
Q 019878           65 --GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVH  133 (334)
Q Consensus        65 --~~d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~  133 (334)
                        ++|+|||+||....      ..++++..+++|+.++.++++++...   .+..++|++||...+.....         
T Consensus       127 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~---------  197 (346)
T 3kvo_A          127 FGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWF---------  197 (346)
T ss_dssp             HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGT---------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCC---------
Confidence              69999999997432      12234568899999999999999554   24569999999876643211         


Q ss_pred             ccccccChHHHHHHHHHHHHHHHhh---cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeee
Q 019878          134 EEKYFCTQYERSKAVADKIALQAAS---EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCH  210 (334)
Q Consensus       134 ~~~~~~~~Y~~sK~~~E~~~~~~~~---~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  210 (334)
                         .....|+.+|.+.+.+.+.+..   .|+++..+.|+.+...      ..    . +.+.+..        ....+..
T Consensus       198 ---~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T------~~----~-~~~~~~~--------~~~r~~~  255 (346)
T 3kvo_A          198 ---KQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHT------AA----M-DMLGGPG--------IESQCRK  255 (346)
T ss_dssp             ---SSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCC------HH----H-HHHCC----------CGGGCBC
T ss_pred             ---CCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcccc------HH----H-Hhhcccc--------ccccCCC
Confidence               1136799999999988887653   4899999999964332      11    1 1122211        1234668


Q ss_pred             HHHHHHHHHHHhhcC--CCCCeEEec
Q 019878          211 VDDVVDGHIAAMEKG--RSGERYLLT  234 (334)
Q Consensus       211 v~D~a~a~~~~~~~~--~~g~~~~i~  234 (334)
                      ++|+|++++.++...  ..|+++ +.
T Consensus       256 pedvA~~v~~L~s~~~~itG~~i-vd  280 (346)
T 3kvo_A          256 VDIIADAAYSIFQKPKSFTGNFV-ID  280 (346)
T ss_dssp             THHHHHHHHHHHTSCTTCCSCEE-EH
T ss_pred             HHHHHHHHHHHHhcCCCCCceEE-EC
Confidence            999999999999863  257766 54

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.84  E-value=4.7e-21  Score=162.93  Aligned_cols=191  Identities=14%  Similarity=0.137  Sum_probs=138.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC--------CCCCeEEEEcCCCChhhHHHHhc-------CC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP--------SEGALELVYGDVTDYRSLVDACF-------GC   66 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~v~~~~~Dl~d~~~~~~~~~-------~~   66 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.++...+.        ...++.++.+|++|.+++.++++       ++
T Consensus         9 ~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   88 (250)
T 3nyw_A            9 LAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGAV   88 (250)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHCCE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhcCCC
Confidence            5999999999999999999999999999999865322110        11368899999999998877764       58


Q ss_pred             CEEEEeccccCC--C---CCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           67 HVIFHTAALVEP--W---LPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        67 d~vih~a~~~~~--~---~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      |++||+||....  .   .+++...+++|+.++.++++++...   .+..++|++||...+.....              
T Consensus        89 D~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------  154 (250)
T 3nyw_A           89 DILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFAD--------------  154 (250)
T ss_dssp             EEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CC--------------
T ss_pred             CEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCC--------------
Confidence            999999997432  1   1234568899999999999998542   14569999999776542211              


Q ss_pred             cChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      ...|+.+|.+.+.+.+.+.    ++|+++..++||.+..+.           .... ...        .....++.++|+
T Consensus       155 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~-----------~~~~-~~~--------~~~~~~~~p~dv  214 (250)
T 3nyw_A          155 GGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDM-----------AKKA-GTP--------FKDEEMIQPDDL  214 (250)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHH-----------HHHT-TCC--------SCGGGSBCHHHH
T ss_pred             CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCch-----------hhhc-CCC--------cccccCCCHHHH
Confidence            2679999998888777654    458999999999996531           1111 111        122357899999


Q ss_pred             HHHHHHHhhcCC
Q 019878          215 VDGHIAAMEKGR  226 (334)
Q Consensus       215 a~a~~~~~~~~~  226 (334)
                      ++++..++..+.
T Consensus       215 a~~v~~l~s~~~  226 (250)
T 3nyw_A          215 LNTIRCLLNLSE  226 (250)
T ss_dssp             HHHHHHHHTSCT
T ss_pred             HHHHHHHHcCCC
Confidence            999999998654

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.84  E-value=3.2e-20  Score=161.40  Aligned_cols=206  Identities=17%  Similarity=0.157  Sum_probs=149.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEE-cCCCCCCC----C--CCCCCeEEEEcCCCChh-----------------
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALV-RRTSDISG----L--PSEGALELVYGDVTDYR-----------------   57 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~----~--~~~~~v~~~~~Dl~d~~-----------------   57 (334)
                      ++|||||+|+||.++++.|+++|++|++++ |+.+....    +  ....++.++.+|++|.+                 
T Consensus        11 ~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~   90 (291)
T 1e7w_A           11 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFT   90 (291)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHH
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccccchHH
Confidence            599999999999999999999999999999 87543211    1  00126899999999998                 


Q ss_pred             hHHHHhc-------CCCEEEEeccccCC------C--------------CCCcccchhhhhHHHHHHHHHHHhc---CC-
Q 019878           58 SLVDACF-------GCHVIFHTAALVEP------W--------------LPDPSRFFAVNVEGLKNVVQAAKET---KT-  106 (334)
Q Consensus        58 ~~~~~~~-------~~d~vih~a~~~~~------~--------------~~~~~~~~~~n~~~~~~l~~~~~~~---~~-  106 (334)
                      ++.++++       ++|++||+||....      .              .+++...+++|+.++.++++++.+.   .+ 
T Consensus        91 ~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~  170 (291)
T 1e7w_A           91 RCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPA  170 (291)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCG
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence            8777765       68999999997432      1              1233467899999999999998753   12 


Q ss_pred             -----CcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCC
Q 019878          107 -----VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKL  177 (334)
Q Consensus       107 -----~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~  177 (334)
                           ..++|++||...+.+..              ....|+.+|.+.+.+.+.+.    ++|+++..++||.+..+. .
T Consensus       171 ~~~~~~g~Iv~isS~~~~~~~~--------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~  235 (291)
T 1e7w_A          171 KHRGTNYSIINMVDAMTNQPLL--------------GYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D  235 (291)
T ss_dssp             GGSCSCEEEEEECCTTTTSCCT--------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G
T ss_pred             CCCCCCcEEEEEechhhcCCCC--------------CCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c
Confidence                 46999999987664322              13679999999888777654    458999999999997654 1


Q ss_pred             CchhHHHHHHHHHHcCCCCccccCCCCce-eeeeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          178 TTGNLVAKLMIERFNGRLPGYIGYGNDRF-SFCHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                       ..   ........ ...+        .. .+..++|+|++++.++...   ..|+++++.|
T Consensus       236 -~~---~~~~~~~~-~~~p--------~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdG  284 (291)
T 1e7w_A          236 -MP---PAVWEGHR-SKVP--------LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDG  284 (291)
T ss_dssp             -SC---HHHHHHHH-TTCT--------TTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             -CC---HHHHHHHH-hhCC--------CCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECC
Confidence             11   12222222 1111        11 3667999999999998643   3688999864

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.83  E-value=1.1e-19  Score=156.23  Aligned_cols=210  Identities=15%  Similarity=0.060  Sum_probs=150.8

Q ss_pred             cEEEEcCC--ChhhHHHHHHHHhCCCeEEEEEcCCCCC-C----CCC--CCCCeEEEEcCCCChhhHHHHhc-------C
Q 019878            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRRTSDI-S----GLP--SEGALELVYGDVTDYRSLVDACF-------G   65 (334)
Q Consensus         2 ~ilItG~t--G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~----~~~--~~~~v~~~~~Dl~d~~~~~~~~~-------~   65 (334)
                      ++|||||+  |+||.++++.|+++|++|++++|+.... .    .+.  ...++.++.+|++|.+++.++++       +
T Consensus        22 ~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  101 (267)
T 3gdg_A           22 VVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADFGQ  101 (267)
T ss_dssp             EEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHHTSC
T ss_pred             EEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            59999999  8999999999999999999999886543 1    000  01368899999999998877764       4


Q ss_pred             CCEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccc
Q 019878           66 CHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (334)
Q Consensus        66 ~d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~  136 (334)
                      +|+|||+||....      ..+++...+++|+.++.++++++...   .+..++|++||...+.....            
T Consensus       102 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------  169 (267)
T 3gdg_A          102 IDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFP------------  169 (267)
T ss_dssp             CSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSS------------
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCC------------
Confidence            7999999997432      12234568899999999999988432   13569999999766533210            


Q ss_pred             cccChHHHHHHHHHHHHHHHhhc---CCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHH
Q 019878          137 YFCTQYERSKAVADKIALQAASE---GLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       137 ~~~~~Y~~sK~~~E~~~~~~~~~---g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                      .+...|+.+|++.+.+.+.+..+   .+++..+.||.+..+......    ..........        .....+.+++|
T Consensus       170 ~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~--------~~~~r~~~~~d  237 (267)
T 3gdg_A          170 QEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVP----KETQQLWHSM--------IPMGRDGLAKE  237 (267)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSC----HHHHHHHHTT--------STTSSCEETHH
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCC----HHHHHHHHhc--------CCCCCCcCHHH
Confidence            01367999999999988886632   378999999999876422111    1111111121        12345788999


Q ss_pred             HHHHHHHHhhcC---CCCCeEEecC
Q 019878          214 VVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       214 ~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +++++..++...   ..|+++++.|
T Consensus       238 va~~~~~l~s~~~~~itG~~i~vdg  262 (267)
T 3gdg_A          238 LKGAYVYFASDASTYTTGADLLIDG  262 (267)
T ss_dssp             HHHHHHHHHSTTCTTCCSCEEEEST
T ss_pred             HHhHhheeecCccccccCCEEEECC
Confidence            999999998753   2689999964

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.83  E-value=3.6e-20  Score=155.62  Aligned_cols=204  Identities=16%  Similarity=0.170  Sum_probs=148.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC-CCCCCeEEEEcCCCChhhHHHHhc-------CCCEEEEec
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-PSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~a   73 (334)
                      +||||||++.||.++++.|+++|++|++++|+++....+ .+..++.++.+|++|.+++.++++       ++|++||+|
T Consensus         4 ~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNNA   83 (247)
T 3ged_A            4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNNA   83 (247)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            599999999999999999999999999999986543221 122478999999999998877664       589999999


Q ss_pred             cccCC------CCCCcccchhhhhHHHHHHHHHHHhcC--CCcEEEEecccceeccCCCccCCCCCccccccccChHHHH
Q 019878           74 ALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (334)
Q Consensus        74 ~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (334)
                      |....      ..++++..+++|+.++..+.+++.++.  .-.++|++||...+...+.              ...|+.|
T Consensus        84 G~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~~--------------~~~Y~as  149 (247)
T 3ged_A           84 CRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPD--------------SEAYASA  149 (247)
T ss_dssp             CCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCTT--------------CHHHHHH
T ss_pred             CCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCCC--------------CHHHHHH
Confidence            97322      234567789999999999988876541  1259999999876543322              2569999


Q ss_pred             HHHHHHHHHHHhh---cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHh
Q 019878          146 KAVADKIALQAAS---EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAM  222 (334)
Q Consensus       146 K~~~E~~~~~~~~---~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~  222 (334)
                      |.....+.+.+..   .|+++..+-||.+-.+....   +    ........+.         .-+...+|+|+++..++
T Consensus       150 Kaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~---~----~~~~~~~~Pl---------~R~g~pediA~~v~fL~  213 (247)
T 3ged_A          150 KGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQE---F----TQEDCAAIPA---------GKVGTPKDISNMVLFLC  213 (247)
T ss_dssp             HHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC------C----CHHHHHTSTT---------SSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHH---H----HHHHHhcCCC---------CCCcCHHHHHHHHHHHH
Confidence            9987776665432   38999999999997654321   1    1111222221         12556999999999998


Q ss_pred             hcCC-CCCeEEecC
Q 019878          223 EKGR-SGERYLLTG  235 (334)
Q Consensus       223 ~~~~-~g~~~~i~g  235 (334)
                      .... +|+++.+.|
T Consensus       214 s~~~iTG~~i~VDG  227 (247)
T 3ged_A          214 QQDFITGETIIVDG  227 (247)
T ss_dssp             HCSSCCSCEEEEST
T ss_pred             hCCCCCCCeEEECc
Confidence            7543 689999964

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.83  E-value=4.2e-20  Score=171.11  Aligned_cols=195  Identities=24%  Similarity=0.305  Sum_probs=144.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCe-EEEEEcCCCCCCC-------CCC-CCCeEEEEcCCCChhhHHHHhcCC-----
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHS-VRALVRRTSDISG-------LPS-EGALELVYGDVTDYRSLVDACFGC-----   66 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~-------~~~-~~~v~~~~~Dl~d~~~~~~~~~~~-----   66 (334)
                      +++|||||+|+||.++++.|.++|++ |++++|+......       +.. ..++.++.+|++|.+++.++++++     
T Consensus       227 ~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~g~  306 (486)
T 2fr1_A          227 GTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVP  306 (486)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhcCC
Confidence            36999999999999999999999985 9999998643211       111 126889999999999999888764     


Q ss_pred             -CEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           67 -HVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        67 -d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                       |+|||+||....      ..++....++.|+.++.++.+++.+. +.++||++||...+....+              .
T Consensus       307 ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~~~~~V~~SS~a~~~g~~g--------------~  371 (486)
T 2fr1_A          307 LSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-DLTAFVLFSSFASAFGAPG--------------L  371 (486)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-CCSEEEEEEEHHHHTCCTT--------------C
T ss_pred             CcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC-CCCEEEEEcChHhcCCCCC--------------C
Confidence             999999997432      12234567889999999999999887 6889999999755432221              2


Q ss_pred             ChHHHHHHHHHHHHHHHhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHH
Q 019878          140 TQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHI  219 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  219 (334)
                      +.|+.+|...+.+..++...|+++++++|+.+++++-.      .....    ..   +   ......+++.+|+++++.
T Consensus       372 ~~Yaaaka~l~~la~~~~~~gi~v~~i~pG~~~~~gm~------~~~~~----~~---~---~~~g~~~i~~e~~a~~l~  435 (486)
T 2fr1_A          372 GGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMA------EGPVA----DR---F---RRHGVIEMPPETACRALQ  435 (486)
T ss_dssp             TTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC-------------------------C---TTTTEECBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCeEEEEECCeeCCCccc------chhHH----HH---H---HhcCCCCCCHHHHHHHHH
Confidence            56999999999988887778999999999999876421      00000    00   0   112346899999999999


Q ss_pred             HHhhcCC
Q 019878          220 AAMEKGR  226 (334)
Q Consensus       220 ~~~~~~~  226 (334)
                      .++....
T Consensus       436 ~~l~~~~  442 (486)
T 2fr1_A          436 NALDRAE  442 (486)
T ss_dssp             HHHHTTC
T ss_pred             HHHhCCC
Confidence            9998754

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.83  E-value=3e-21  Score=165.12  Aligned_cols=207  Identities=16%  Similarity=0.173  Sum_probs=143.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHh---CCCeEEEEEcCCCCCCCCC-------CCCCeEEEEcCCCChhhHHHHhc-------
Q 019878            2 KILVSGASGYLGGRLCHALLK---QGHSVRALVRRTSDISGLP-------SEGALELVYGDVTDYRSLVDACF-------   64 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~-------~~~~v~~~~~Dl~d~~~~~~~~~-------   64 (334)
                      ++|||||+|+||.++++.|++   +|++|++++|+.+....+.       ...++.++.+|++|.+++.++++       
T Consensus         8 ~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   87 (259)
T 1oaa_A            8 VCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPR   87 (259)
T ss_dssp             EEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSCC
T ss_pred             EEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHhccc
Confidence            599999999999999999999   8999999999864322110       01258899999999988877653       


Q ss_pred             --CCC--EEEEeccccCC---------CCCCcccchhhhhHHHHHHHHHHHhcC-----CCcEEEEecccceeccCCCcc
Q 019878           65 --GCH--VIFHTAALVEP---------WLPDPSRFFAVNVEGLKNVVQAAKETK-----TVEKIIYTSSFFALGSTDGYI  126 (334)
Q Consensus        65 --~~d--~vih~a~~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~~v~~Ss~~v~~~~~~~~  126 (334)
                        ++|  +|||+||....         ..++++..+++|+.++.++++++.+..     +..++|++||...+.+.+   
T Consensus        88 ~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---  164 (259)
T 1oaa_A           88 PEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYK---  164 (259)
T ss_dssp             CTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCT---
T ss_pred             cccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCCC---
Confidence              358  99999997421         112345688999999999999998753     234799999987764322   


Q ss_pred             CCCCCccccccccChHHHHHHHHHHHHHHHhhc--CCCEEEEecCceecCCCCCchhHHH----HHHHHHHcCCCCcccc
Q 019878          127 ADENQVHEEKYFCTQYERSKAVADKIALQAASE--GLPIVPVYPGVIYGPGKLTTGNLVA----KLMIERFNGRLPGYIG  200 (334)
Q Consensus       127 ~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~--g~~~~ilR~~~v~G~~~~~~~~~~~----~~~~~~~~~~~~~~~~  200 (334)
                                 +...|+.+|.+.+.+.+.+..+  ++++..+.||.+-.+..   .....    ...........     
T Consensus       165 -----------~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~---~~~~~~~~~~~~~~~~~~~~-----  225 (259)
T 1oaa_A          165 -----------GWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQ---QLARETSKDPELRSKLQKLK-----  225 (259)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHH---HHHHHHCSCHHHHHHHHHHH-----
T ss_pred             -----------CccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchH---HHHhhccCChhHHHHHHHhh-----
Confidence                       1367999999999999887642  58888999998854310   00000    00000000000     


Q ss_pred             CCCCceeeeeHHHHHHHHHHHhhcC--CCCCeEEe
Q 019878          201 YGNDRFSFCHVDDVVDGHIAAMEKG--RSGERYLL  233 (334)
Q Consensus       201 ~~~~~~~~i~v~D~a~a~~~~~~~~--~~g~~~~i  233 (334)
                         ....+..++|+|++++.++...  ..|+++++
T Consensus       226 ---p~~~~~~p~dvA~~v~~l~~~~~~itG~~i~v  257 (259)
T 1oaa_A          226 ---SDGALVDCGTSAQKLLGLLQKDTFQSGAHVDF  257 (259)
T ss_dssp             ---HTTCSBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred             ---hcCCcCCHHHHHHHHHHHHhhccccCCcEEec
Confidence               1124678999999999988743  24666554

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.83  E-value=2.2e-20  Score=159.39  Aligned_cols=210  Identities=16%  Similarity=0.152  Sum_probs=148.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCC-CCCCC----CC-CCCCeEEEEcCCCChhhHHHHhcC----------
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISG----LP-SEGALELVYGDVTDYRSLVDACFG----------   65 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~----~~-~~~~v~~~~~Dl~d~~~~~~~~~~----------   65 (334)
                      ++|||||+|+||.++++.|+++|++|+++.++. +....    +. ....+.++.+|++|.+.+.++++.          
T Consensus         9 ~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   88 (255)
T 3icc_A            9 VALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRTG   88 (255)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHHHHS
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhccccc
Confidence            599999999999999999999999999875443 22111    00 113678899999999887776542          


Q ss_pred             ---CCEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCcccc
Q 019878           66 ---CHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEE  135 (334)
Q Consensus        66 ---~d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~  135 (334)
                         +|++||+||....      ..++.+..+++|+.++.++++++.+.. ...++|++||...+.+.+.           
T Consensus        89 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~-----------  157 (255)
T 3icc_A           89 STKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPD-----------  157 (255)
T ss_dssp             SSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCTT-----------
T ss_pred             CCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCCC-----------
Confidence               8999999997432      112345578899999999999998752 1248999999877654321           


Q ss_pred             ccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeH
Q 019878          136 KYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHV  211 (334)
Q Consensus       136 ~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  211 (334)
                         .+.|+.+|++.+.+.+.+.    ++|+++..++||.+..+........  ..........        .....+..+
T Consensus       158 ---~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~~--------~~~~~~~~~  224 (255)
T 3icc_A          158 ---FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSD--PMMKQYATTI--------SAFNRLGEV  224 (255)
T ss_dssp             ---BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTS--HHHHHHHHHT--------STTSSCBCH
T ss_pred             ---cchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhccc--HHHHHhhhcc--------CCcCCCCCH
Confidence               3679999999988877654    4589999999999988753221110  1111111111        122346789


Q ss_pred             HHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          212 DDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       212 ~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +|+++++..++...   ..|+++++.|
T Consensus       225 ~dva~~~~~l~s~~~~~~tG~~i~vdg  251 (255)
T 3icc_A          225 EDIADTAAFLASPDSRWVTGQLIDVSG  251 (255)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             HHHHHHHHHHhCcccCCccCCEEEecC
Confidence            99999999988643   3699999964

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.82  E-value=1.2e-20  Score=163.29  Aligned_cols=212  Identities=18%  Similarity=0.195  Sum_probs=147.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+....+..  ..++.++.+|++|.+++.++++       ++|++||+
T Consensus         7 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnn   86 (281)
T 3zv4_A            7 VALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPN   86 (281)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            59999999999999999999999999999998654321110  1368999999999988877764       57999999


Q ss_pred             ccccCCC--C-----C----CcccchhhhhHHHHHHHHHHHhcC--CCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           73 AALVEPW--L-----P----DPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        73 a~~~~~~--~-----~----~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      ||.....  .     +    +++..+++|+.++.++++++.+..  ...++|++||...+.....              .
T Consensus        87 Ag~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~  152 (281)
T 3zv4_A           87 AGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGG--------------G  152 (281)
T ss_dssp             CCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSSS--------------C
T ss_pred             CCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCCC--------------C
Confidence            9974321  0     1    134578899999999999986541  1259999999876643321              3


Q ss_pred             ChHHHHHHHHHHHHHHHhh---cCCCEEEEecCceecCCCCCchh-H----HHH-HHHHHHcCCCCccccCCCCceeeee
Q 019878          140 TQYERSKAVADKIALQAAS---EGLPIVPVYPGVIYGPGKLTTGN-L----VAK-LMIERFNGRLPGYIGYGNDRFSFCH  210 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~~---~g~~~~ilR~~~v~G~~~~~~~~-~----~~~-~~~~~~~~~~~~~~~~~~~~~~~i~  210 (334)
                      ..|+.||.+.+.+.+.+..   .++++..+.||.+..+....... .    ... ..........        ....+..
T Consensus       153 ~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------p~~r~~~  224 (281)
T 3zv4_A          153 PLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVL--------PIGRMPA  224 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTC--------TTSSCCC
T ss_pred             chhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcC--------CCCCCCC
Confidence            5699999999988887652   14999999999998764211100 0    000 0111111111        1234678


Q ss_pred             HHHHHHHHHHHhh-cC---CCCCeEEecC
Q 019878          211 VDDVVDGHIAAME-KG---RSGERYLLTG  235 (334)
Q Consensus       211 v~D~a~a~~~~~~-~~---~~g~~~~i~g  235 (334)
                      ++|+|++++.++. ..   -.|+++++.|
T Consensus       225 pedvA~~v~fL~s~~~~~~itG~~i~vdG  253 (281)
T 3zv4_A          225 LEEYTGAYVFFATRGDSLPATGALLNYDG  253 (281)
T ss_dssp             GGGGSHHHHHHHSTTTSTTCSSCEEEESS
T ss_pred             HHHHHHHHHHhhcccccccccCcEEEECC
Confidence            9999999999987 32   3699999964

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.82  E-value=4.3e-20  Score=155.83  Aligned_cols=209  Identities=15%  Similarity=0.134  Sum_probs=148.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CC-CCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||++.||.++++.|+++|++|++++|+++..+.+    .. ..++.++.+|++|.+++.++++       ++|++
T Consensus         9 valVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiL   88 (254)
T 4fn4_A            9 VVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRIDVL   88 (254)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            589999999999999999999999999999986543211    11 1368899999999998877764       48999


Q ss_pred             EEeccccCC-------CCCCcccchhhhhHHHHHHHHHHHhcC---CCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           70 FHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        70 ih~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      ||+||....       ..++++..+++|+.++..+.+++.++.   +-.++|++||.......+.              .
T Consensus        89 VNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~--------------~  154 (254)
T 4fn4_A           89 CNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFA--------------G  154 (254)
T ss_dssp             EECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSS--------------C
T ss_pred             EECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCC--------------C
Confidence            999996321       223466789999999999988887651   3468999999765533221              2


Q ss_pred             ChHHHHHHHHHHHHH----HHhhcCCCEEEEecCceecCCCCCc---hhHHHHHHHHHHcCCCCccccCCCCceeeeeHH
Q 019878          140 TQYERSKAVADKIAL----QAASEGLPIVPVYPGVIYGPGKLTT---GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVD  212 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~----~~~~~g~~~~ilR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  212 (334)
                      ..|+.+|.....+.+    ++.++|+++..+-||.+-.+.....   .......+...   ..+  .      .-+...+
T Consensus       155 ~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~---~~~--~------~R~g~pe  223 (254)
T 4fn4_A          155 APYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKL---MSL--S------SRLAEPE  223 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHH---HTT--C------CCCBCHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhc---CCC--C------CCCcCHH
Confidence            669999997665555    4557799999999999976632111   11111111111   111  0      1245689


Q ss_pred             HHHHHHHHHhhcC---CCCCeEEecC
Q 019878          213 DVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       213 D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      |+|.+++.++...   -+|+++.+.|
T Consensus       224 diA~~v~fLaSd~a~~iTG~~i~VDG  249 (254)
T 4fn4_A          224 DIANVIVFLASDEASFVNGDAVVVDG  249 (254)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHhCchhcCCcCCEEEeCC
Confidence            9999999998643   3689999854

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.82  E-value=3.2e-20  Score=157.57  Aligned_cols=198  Identities=17%  Similarity=0.176  Sum_probs=142.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC------CCCCeEEEEcCC--CChhhHHHHhc-------CC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP------SEGALELVYGDV--TDYRSLVDACF-------GC   66 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~~v~~~~~Dl--~d~~~~~~~~~-------~~   66 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.++...+.      ...++.++.+|+  .|.+++.++++       ++
T Consensus        16 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~g~i   95 (247)
T 3i1j_A           16 VILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEFGRL   95 (247)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHHSCC
T ss_pred             EEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhCCCC
Confidence            5999999999999999999999999999999865322110      012567788887  88887776654       68


Q ss_pred             CEEEEeccccCC-------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccc
Q 019878           67 HVIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (334)
Q Consensus        67 d~vih~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~  136 (334)
                      |+|||+||....       ..+++...+++|+.++.++++++.+.   .+..++|++||...+.....            
T Consensus        96 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------------  163 (247)
T 3i1j_A           96 DGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRAN------------  163 (247)
T ss_dssp             SEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTT------------
T ss_pred             CEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCC------------
Confidence            999999997422       12345568899999999999998532   24569999999776543221            


Q ss_pred             cccChHHHHHHHHHHHHHHHh----h-cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeH
Q 019878          137 YFCTQYERSKAVADKIALQAA----S-EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHV  211 (334)
Q Consensus       137 ~~~~~Y~~sK~~~E~~~~~~~----~-~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  211 (334)
                        .+.|+.+|.+.+.+.+.+.    . .|+++..++||.+..+       +    .......         .....+...
T Consensus       164 --~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~-------~----~~~~~~~---------~~~~~~~~p  221 (247)
T 3i1j_A          164 --WGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTG-------M----RAQAYPD---------ENPLNNPAP  221 (247)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSH-------H----HHHHSTT---------SCGGGSCCG
T ss_pred             --cchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCc-------c----chhcccc---------cCccCCCCH
Confidence              3679999999998887754    3 4789999999988543       1    1111111         112245679


Q ss_pred             HHHHHHHHHHhhcC---CCCCeEEe
Q 019878          212 DDVVDGHIAAMEKG---RSGERYLL  233 (334)
Q Consensus       212 ~D~a~a~~~~~~~~---~~g~~~~i  233 (334)
                      +|+++++..++...   -.|+.+++
T Consensus       222 ~dva~~~~~l~s~~~~~itG~~i~~  246 (247)
T 3i1j_A          222 EDIMPVYLYLMGPDSTGINGQALNA  246 (247)
T ss_dssp             GGGTHHHHHHHSGGGTTCCSCEEEC
T ss_pred             HHHHHHHHHHhCchhccccCeeecC
Confidence            99999999998653   25776654

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.82  E-value=1.3e-19  Score=155.76  Aligned_cols=209  Identities=15%  Similarity=0.086  Sum_probs=146.1

Q ss_pred             cEEEEcC--CChhhHHHHHHHHhCCCeEEEEEcCCCCC-----CCCCCCCCeEEEEcCCCChhhHHHHhc----------
Q 019878            2 KILVSGA--SGYLGGRLCHALLKQGHSVRALVRRTSDI-----SGLPSEGALELVYGDVTDYRSLVDACF----------   64 (334)
Q Consensus         2 ~ilItG~--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~~~v~~~~~Dl~d~~~~~~~~~----------   64 (334)
                      ++|||||  +|+||.++++.|+++|++|++++|+..+.     ..+.  .++.++.+|++|.+++.++++          
T Consensus         9 ~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~~   86 (269)
T 2h7i_A            9 RILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLP--AKAPLLELDVQNEEHLASLAGRVTEAIGAGN   86 (269)
T ss_dssp             EEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSS--SCCCEEECCTTCHHHHHHHHHHHHHHHCTTC
T ss_pred             EEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcC--CCceEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            4999999  99999999999999999999999986431     1121  257889999999998887775          


Q ss_pred             CCCEEEEeccccCC-----------CCCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCc
Q 019878           65 GCHVIFHTAALVEP-----------WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQV  132 (334)
Q Consensus        65 ~~d~vih~a~~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~  132 (334)
                      ++|+|||+||....           ..+++...+++|+.++.++++++.+.. .-.++|++||...++..          
T Consensus        87 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~~~----------  156 (269)
T 2h7i_A           87 KLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMP----------  156 (269)
T ss_dssp             CEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCT----------
T ss_pred             CceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccccC----------
Confidence            78999999997431           112345578999999999999998752 11489999987543211          


Q ss_pred             cccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCC------chhH---HHHHHHHHHcCCCCccc
Q 019878          133 HEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLT------TGNL---VAKLMIERFNGRLPGYI  199 (334)
Q Consensus       133 ~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~------~~~~---~~~~~~~~~~~~~~~~~  199 (334)
                           ..+.|+.+|.+.+.+.+.+.    ++|+++..++||.+..+....      ....   .......... ..+  .
T Consensus       157 -----~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p--~  228 (269)
T 2h7i_A          157 -----AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQ-RAP--I  228 (269)
T ss_dssp             -----TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHH-HCT--T
T ss_pred             -----chHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhc-cCC--c
Confidence                 13679999999988877654    458999999999986541000      0000   0000111111 111  0


Q ss_pred             cCCCCceeeeeHHHHHHHHHHHhhcCC---CCCeEEecC
Q 019878          200 GYGNDRFSFCHVDDVVDGHIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       200 ~~~~~~~~~i~v~D~a~a~~~~~~~~~---~g~~~~i~g  235 (334)
                           .|.+...+|+|+++..++....   +|+++.+.|
T Consensus       229 -----~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG  262 (269)
T 2h7i_A          229 -----GWNMKDATPVAKTVCALLSDWLPATTGDIIYADG  262 (269)
T ss_dssp             -----CCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEEST
T ss_pred             -----ccCCCCHHHHHHHHHHHhCchhccCcceEEEecC
Confidence                 0125678999999999987532   588888864

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.82  E-value=3.2e-20  Score=158.79  Aligned_cols=210  Identities=19%  Similarity=0.104  Sum_probs=139.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----CCCeEEEEcCCCChhhHHHHhc--------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----EGALELVYGDVTDYRSLVDACF--------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~v~~~~~Dl~d~~~~~~~~~--------~~d~   68 (334)
                      ++|||||+|+||.++++.|+++|++|++++|+.+....+..     ..++.++.+|++|.+++.++++        ++|+
T Consensus         7 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id~   86 (260)
T 2qq5_A            7 VCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGRLDV   86 (260)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTCCCE
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCceE
Confidence            59999999999999999999999999999998653221100     1257899999999988776653        4799


Q ss_pred             EEEecc--cc-------CC----CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCc
Q 019878           69 IFHTAA--LV-------EP----WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQV  132 (334)
Q Consensus        69 vih~a~--~~-------~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~  132 (334)
                      +||+||  ..       .+    ..+++...+++|+.++.++.+++.+.   .+..++|++||...+...          
T Consensus        87 lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  156 (260)
T 2qq5_A           87 LVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM----------  156 (260)
T ss_dssp             EEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC----------
T ss_pred             EEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC----------
Confidence            999994  22       11    12234567889999998877776532   145799999998766421          


Q ss_pred             cccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceee
Q 019878          133 HEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSF  208 (334)
Q Consensus       133 ~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (334)
                           +...|+.+|.+.+.+.+.+.    ++|+++.+++||.+..+....   .....-..  .........  .....+
T Consensus       157 -----~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~---~~~~~~~~--~~~~~~~~~--~~~~~~  224 (260)
T 2qq5_A          157 -----FNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKE---HMAKEEVL--QDPVLKQFK--SAFSSA  224 (260)
T ss_dssp             -----SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC-----------------------------CHH
T ss_pred             -----CCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHH---hhcccccc--chhHHHHHH--hhhccC
Confidence                 12569999999998887654    469999999999998774211   00000000  000000000  001123


Q ss_pred             eeHHHHHHHHHHHhhcCC----CCCeEEe
Q 019878          209 CHVDDVVDGHIAAMEKGR----SGERYLL  233 (334)
Q Consensus       209 i~v~D~a~a~~~~~~~~~----~g~~~~i  233 (334)
                      ...+|+|+++..++..+.    +|+++.+
T Consensus       225 ~~pe~va~~v~~l~s~~~~~~itG~~i~~  253 (260)
T 2qq5_A          225 ETTELSGKCVVALATDPNILSLSGKVLPS  253 (260)
T ss_dssp             HHHHHHHHHHHHHHTCTTGGGGTTCEEEH
T ss_pred             CCHHHHHHHHHHHhcCcccccccceeech
Confidence            578999999999987542    4555544

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.81  E-value=2.9e-19  Score=166.18  Aligned_cols=212  Identities=20%  Similarity=0.259  Sum_probs=152.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCC-------CCC-CCCeEEEEcCCCChhhHHHHhcC--CCEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISG-------LPS-EGALELVYGDVTDYRSLVDACFG--CHVIF   70 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~-------~~~-~~~v~~~~~Dl~d~~~~~~~~~~--~d~vi   70 (334)
                      +||||||+|+||.++++.|.++|+ +|++++|+......       +.. ..++.++.+|++|.+++.+++++  +|+||
T Consensus       261 ~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld~VV  340 (511)
T 2z5l_A          261 TVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPNAVF  340 (511)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCSEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCcEEE
Confidence            699999999999999999999998 58889998643211       111 12588999999999999999875  99999


Q ss_pred             EeccccCCC------CCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccce-eccCCCccCCCCCccccccccChHH
Q 019878           71 HTAALVEPW------LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA-LGSTDGYIADENQVHEEKYFCTQYE  143 (334)
Q Consensus        71 h~a~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v-~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (334)
                      |+||.....      .++....+..|+.++.++.+++....+.++||++||... +|...               ...|+
T Consensus       341 h~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g---------------~~~Ya  405 (511)
T 2z5l_A          341 HTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAG---------------QGAYA  405 (511)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTT---------------BHHHH
T ss_pred             ECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCC---------------CHHHH
Confidence            999975431      123445778999999999999876535679999999754 44321               26699


Q ss_pred             HHHHHHHHHHHHHhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhh
Q 019878          144 RSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAME  223 (334)
Q Consensus       144 ~sK~~~E~~~~~~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~  223 (334)
                      .+|...|.+.+.+...|+++++++|+.+-+.+-..  ......+.   .           ....+++.+|+++++..++.
T Consensus       406 aaKa~ld~la~~~~~~gi~v~sv~pG~~~~tgm~~--~~~~~~~~---~-----------~g~~~l~~e~~a~~l~~al~  469 (511)
T 2z5l_A          406 AANAALDALAERRRAAGLPATSVAWGLWGGGGMAA--GAGEESLS---R-----------RGLRAMDPDAAVDALLGAMG  469 (511)
T ss_dssp             HHHHHHHHHHHHHHTTTCCCEEEEECCBCSTTCCC--CHHHHHHH---H-----------HTBCCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCcEEEEECCcccCCcccc--cccHHHHH---h-----------cCCCCCCHHHHHHHHHHHHh
Confidence            99999999999887789999999999884332211  11111111   0           11246889999999999998


Q ss_pred             cCCCCCeEEecCCCCCHHHHHHHHH
Q 019878          224 KGRSGERYLLTGENASFMQIFDMAA  248 (334)
Q Consensus       224 ~~~~g~~~~i~g~~~s~~e~~~~i~  248 (334)
                      ++..  .+.+..  +.+..+...+.
T Consensus       470 ~~~~--~v~v~~--~d~~~~~~~~~  490 (511)
T 2z5l_A          470 RNDV--CVTVVD--VDWERFAPATN  490 (511)
T ss_dssp             HTCS--EEEECC--BCHHHHHHHHH
T ss_pred             CCCC--EEEEEe--CCHHHHHhhhc
Confidence            7543  222332  44555554443

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.80  E-value=5.2e-20  Score=155.98  Aligned_cols=211  Identities=18%  Similarity=0.164  Sum_probs=139.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEE-E--cCCCCCCCCCCC-CCeEEEEcCCCChhhHHHHh----cCCCEEEEe
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRAL-V--RRTSDISGLPSE-GALELVYGDVTDYRSLVDAC----FGCHVIFHT   72 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~-~--r~~~~~~~~~~~-~~v~~~~~Dl~d~~~~~~~~----~~~d~vih~   72 (334)
                      +++|||||+|+||.++++.|+++|++|+++ +  |++++...+... .+....  |..+.+.+.+.+    .++|+|||+
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~g~iD~lv~~   79 (244)
T 1zmo_A            2 VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTIAL--AEQKPERLVDATLQHGEAIDTIVSN   79 (244)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTEEEC--CCCCGGGHHHHHGGGSSCEEEEEEC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCCccc--CHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            469999999999999999999999999999 6  876432211000 122222  544544433322    358999999


Q ss_pred             ccccCC---------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           73 AALVEP---------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        73 a~~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      ||....         ..++++..+++|+.++.++++++.+.   .+..++|++||...+...+.              ..
T Consensus        80 Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~--------------~~  145 (244)
T 1zmo_A           80 DYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAY--------------NP  145 (244)
T ss_dssp             CCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT--------------CT
T ss_pred             CCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCC--------------ch
Confidence            997432         11234568899999999999988642   24579999999877653221              36


Q ss_pred             hHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHH-HHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          141 QYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLV-AKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      .|+.+|.+.+.+.+.+.    ++|+++.+++|+.+..+......... ............+        ...+...+|+|
T Consensus       146 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p--------~~r~~~pe~vA  217 (244)
T 1zmo_A          146 LYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVP--------LGRLGRPDEMG  217 (244)
T ss_dssp             THHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCT--------TCSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCC--------CCCCcCHHHHH
Confidence            69999999988877654    45899999999999776420001110 0111111110111        12367899999


Q ss_pred             HHHHHHhhcCC---CCCeEEecC
Q 019878          216 DGHIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       216 ~a~~~~~~~~~---~g~~~~i~g  235 (334)
                      +++..++....   .|+++.+.|
T Consensus       218 ~~v~~l~s~~~~~~tG~~i~vdg  240 (244)
T 1zmo_A          218 ALITFLASRRAAPIVGQFFAFTG  240 (244)
T ss_dssp             HHHHHHHTTTTGGGTTCEEEEST
T ss_pred             HHHHHHcCccccCccCCEEEeCC
Confidence            99999987542   588888864

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.80  E-value=9.7e-20  Score=160.79  Aligned_cols=160  Identities=21%  Similarity=0.166  Sum_probs=124.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----------CCCCeEEEEcCCCChhhHHHHhcC-----
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----------SEGALELVYGDVTDYRSLVDACFG-----   65 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~~v~~~~~Dl~d~~~~~~~~~~-----   65 (334)
                      +||||||+|+||.++++.|+++|++|++++|+........           ...++.++.+|++|.+++.++++.     
T Consensus         4 ~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~g~   83 (327)
T 1jtv_A            4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGR   83 (327)
T ss_dssp             EEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhcCC
Confidence            6999999999999999999999999999888755432211           013689999999999999988864     


Q ss_pred             CCEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccc
Q 019878           66 CHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (334)
Q Consensus        66 ~d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~  136 (334)
                      +|+|||+||....      ..+++...+++|+.++.++++++...   .+..++|++||...+....             
T Consensus        84 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~-------------  150 (327)
T 1jtv_A           84 VDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLP-------------  150 (327)
T ss_dssp             CSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCT-------------
T ss_pred             CCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCC-------------
Confidence            8999999997422      12234568899999999999997332   1467999999987664321             


Q ss_pred             cccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCC
Q 019878          137 YFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPG  175 (334)
Q Consensus       137 ~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~  175 (334)
                       ....|+.||.+.+.+.+.+.    ++|+++++++|+.|..+.
T Consensus       151 -~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~  192 (327)
T 1jtv_A          151 -FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAF  192 (327)
T ss_dssp             -TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred             -CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChH
Confidence             13679999999998887764    369999999999998764

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.80  E-value=6.8e-20  Score=154.70  Aligned_cols=210  Identities=18%  Similarity=0.154  Sum_probs=149.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CC-CCCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||++.||.++++.|+++|++|++.+|+++...+    +. ...++.++.+|++|.+++.++++       ++|++
T Consensus        11 valVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL   90 (255)
T 4g81_D           11 TALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHVDIL   90 (255)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCCCEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEE
Confidence            58999999999999999999999999999998653221    11 11368899999999998877764       48999


Q ss_pred             EEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc----CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        70 ih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      ||+||....      ..++++..+++|+.++..+.+++.++    ++-.++|++||.......+.              .
T Consensus        91 VNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~--------------~  156 (255)
T 4g81_D           91 INNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPT--------------V  156 (255)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTT--------------C
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCC--------------c
Confidence            999997432      23356778999999999999887553    23469999999876644332              2


Q ss_pred             ChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCCCCchhHHH-HHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          140 TQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTTGNLVA-KLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~----~~~~g~~~~ilR~~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      ..|+.+|.....+.+.    +.++|+++..+-||.+..+..   ..... ..+........|        ..-+...+|+
T Consensus       157 ~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~---~~~~~~~~~~~~~~~~~P--------l~R~g~pedi  225 (255)
T 4g81_D          157 APYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMN---TALIEDKQFDSWVKSSTP--------SQRWGRPEEL  225 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGG---HHHHTCHHHHHHHHHHST--------TCSCBCGGGG
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchh---hcccCCHHHHHHHHhCCC--------CCCCcCHHHH
Confidence            6699999977665554    556799999999999976632   11110 111111111111        1125568999


Q ss_pred             HHHHHHHhhcC---CCCCeEEecCC
Q 019878          215 VDGHIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       215 a~a~~~~~~~~---~~g~~~~i~g~  236 (334)
                      |.++..++...   -+|+++.+.|.
T Consensus       226 A~~v~fL~S~~a~~iTG~~i~VDGG  250 (255)
T 4g81_D          226 IGTAIFLSSKASDYINGQIIYVDGG  250 (255)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHhCchhCCCcCCEEEECCC
Confidence            99999988643   36899998653

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.80  E-value=1.3e-18  Score=147.56  Aligned_cols=212  Identities=16%  Similarity=0.116  Sum_probs=149.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC----CCCCeEEEEcCCCChhhHHHHhc-------CCCEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----SEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vi   70 (334)
                      ++|||||++.||.++++.|+++|.+|++.+|+.+....+.    ...++.++.+|++|.+++.++++       ++|++|
T Consensus         9 valVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iDiLV   88 (258)
T 4gkb_A            9 VVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLDGLV   88 (258)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            4899999999999999999999999999999876432111    11368999999999988777664       489999


Q ss_pred             EeccccCC-----CCCCcccchhhhhHHHHHHHHHHHhcC--CCcEEEEecccceeccCCCccCCCCCccccccccChHH
Q 019878           71 HTAALVEP-----WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (334)
Q Consensus        71 h~a~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (334)
                      |+||....     ..+++...+++|+.++..+.+++.++.  +-.++|++||.......+.              ...|+
T Consensus        89 NnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~--------------~~~Y~  154 (258)
T 4gkb_A           89 NNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQGN--------------TSGYC  154 (258)
T ss_dssp             ECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCSS--------------CHHHH
T ss_pred             ECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCCC--------------chHHH
Confidence            99997432     223456688999999999988886541  1258999999876644332              26699


Q ss_pred             HHHHHHHHHHHH----HhhcCCCEEEEecCceecCCCCCchh---HHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHH
Q 019878          144 RSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTTGN---LVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVD  216 (334)
Q Consensus       144 ~sK~~~E~~~~~----~~~~g~~~~ilR~~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  216 (334)
                      .+|.....+.+.    +.++|+++..+.||.+-.+.......   .-...........+.   +     +-+...+|+|.
T Consensus       155 asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---g-----~R~g~peeiA~  226 (258)
T 4gkb_A          155 ASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPL---G-----RRFTTPDEIAD  226 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTT---T-----TSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCC---C-----CCCcCHHHHHH
Confidence            999977766654    45679999999999998764321100   001111222222111   0     13556999999


Q ss_pred             HHHHHhhcC---CCCCeEEecC
Q 019878          217 GHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       217 a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +++.++...   -+|+++.+.|
T Consensus       227 ~v~fLaS~~a~~iTG~~i~VDG  248 (258)
T 4gkb_A          227 TAVFLLSPRASHTTGEWLFVDG  248 (258)
T ss_dssp             HHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHhCchhcCccCCeEEECC
Confidence            999988643   3799999954

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.80  E-value=3.2e-18  Score=145.57  Aligned_cols=208  Identities=16%  Similarity=0.143  Sum_probs=144.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~a~   74 (334)
                      ++|||||++.||.++++.|+++|++|++.+|+....  +.   ...++.+|++|.+++.++++       ++|++||+||
T Consensus        13 ~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~--~~---~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG   87 (261)
T 4h15_A           13 RALITAGTKGAGAATVSLFLELGAQVLTTARARPEG--LP---EELFVEADLTTKEGCAIVAEATRQRLGGVDVIVHMLG   87 (261)
T ss_dssp             EEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT--SC---TTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEEECCC
T ss_pred             EEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC--CC---cEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            589999999999999999999999999999986532  22   34578999999988777654       4899999998


Q ss_pred             ccCC--------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChHH
Q 019878           75 LVEP--------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (334)
Q Consensus        75 ~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (334)
                      ....        ..+++...+++|+.++..+.+++..+   ++-.++|++||.....+.+.             ....|+
T Consensus        88 ~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~-------------~~~~Y~  154 (261)
T 4h15_A           88 GSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPE-------------STTAYA  154 (261)
T ss_dssp             CCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-------------TCHHHH
T ss_pred             CCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCC-------------ccHHHH
Confidence            6321        12245668899999999998887654   13468999999765432211             025699


Q ss_pred             HHHHHHHHHHHH----HhhcCCCEEEEecCceecCCCCCc-----------hhHHHHHHHHHHcCCCCccccCCCCceee
Q 019878          144 RSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTT-----------GNLVAKLMIERFNGRLPGYIGYGNDRFSF  208 (334)
Q Consensus       144 ~sK~~~E~~~~~----~~~~g~~~~ilR~~~v~G~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (334)
                      .||.+.+.+.+.    +.++|+++..+.||.+-.+.....           .......+.......+         ..-+
T Consensus       155 asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P---------lgR~  225 (261)
T 4h15_A          155 AAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIP---------LGRP  225 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCT---------TSSC
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCC---------CCCC
Confidence            999977766555    456799999999999965421000           0000111111111111         1236


Q ss_pred             eeHHHHHHHHHHHhhcC---CCCCeEEecCC
Q 019878          209 CHVDDVVDGHIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       209 i~v~D~a~a~~~~~~~~---~~g~~~~i~g~  236 (334)
                      ...+|+|++++.++...   -+|+.+.+.|.
T Consensus       226 g~peevA~~v~fLaS~~a~~itG~~i~VDGG  256 (261)
T 4h15_A          226 AKPEEVANLIAFLASDRAASITGAEYTIDGG  256 (261)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHhCchhcCccCcEEEECCc
Confidence            67999999999988643   36999999654

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.80  E-value=1.7e-19  Score=158.27  Aligned_cols=194  Identities=16%  Similarity=0.153  Sum_probs=137.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CC--CCCCeEEEEcCCCCh-hhHHHHhc-------CCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LP--SEGALELVYGDVTDY-RSLVDACF-------GCH   67 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~--~~~~v~~~~~Dl~d~-~~~~~~~~-------~~d   67 (334)
                      +||||||+|+||.++++.|+++|++|++++|+..+...    +.  ...++.++.+|++|. +.+..+++       ++|
T Consensus        14 ~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~iD   93 (311)
T 3o26_A           14 CAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGKLD   93 (311)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHSSCC
T ss_pred             EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCCCCC
Confidence            59999999999999999999999999999998653211    11  112689999999998 76665553       699


Q ss_pred             EEEEeccccCC------------------------------------CCCCcccchhhhhHHHHHHHHHHHhc---CCCc
Q 019878           68 VIFHTAALVEP------------------------------------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVE  108 (334)
Q Consensus        68 ~vih~a~~~~~------------------------------------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~  108 (334)
                      +|||+||....                                    ..++.+..+++|+.++.++++++...   .+..
T Consensus        94 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~  173 (311)
T 3o26_A           94 ILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSP  173 (311)
T ss_dssp             EEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSC
T ss_pred             EEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhccCCCC
Confidence            99999997532                                    11123456899999999999988643   2456


Q ss_pred             EEEEecccceeccCCCc--------------------------------cCCCCCccccccccChHHHHHHHHHHHHHHH
Q 019878          109 KIIYTSSFFALGSTDGY--------------------------------IADENQVHEEKYFCTQYERSKAVADKIALQA  156 (334)
Q Consensus       109 ~~v~~Ss~~v~~~~~~~--------------------------------~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~  156 (334)
                      ++|++||...+......                                ...+...   ..+...|+.||++.+.+.+.+
T Consensus       174 ~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Y~~SK~a~~~~~~~l  250 (311)
T 3o26_A          174 RIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGW---PSFGAAYTTSKACLNAYTRVL  250 (311)
T ss_dssp             EEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTC---CSSCHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccC---cccchhhHHHHHHHHHHHHHH
Confidence            99999998765432100                                0000000   112467999999999999987


Q ss_pred             hhc--CCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcC
Q 019878          157 ASE--GLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG  225 (334)
Q Consensus       157 ~~~--g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~  225 (334)
                      ...  ++++..+.||.|..+...               +            ......++.++.++.++..+
T Consensus       251 a~e~~~i~v~~v~PG~v~T~~~~---------------~------------~~~~~~~~~a~~~~~~~~~~  294 (311)
T 3o26_A          251 ANKIPKFQVNCVCPGLVKTEMNY---------------G------------IGNYTAEEGAEHVVRIALFP  294 (311)
T ss_dssp             HHHCTTSEEEEECCCSBCSGGGT---------------T------------CCSBCHHHHHHHHHHHHTCC
T ss_pred             HhhcCCceEEEecCCceecCCcC---------------C------------CCCCCHHHHHHHHHHHHhCC
Confidence            743  699999999999765211               0            01246889999998887754

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.79  E-value=1.8e-19  Score=165.38  Aligned_cols=209  Identities=18%  Similarity=0.142  Sum_probs=146.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC--CCCCCCCCeEEEEcCCCChhhHHHHhc-------C-CCEEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI--SGLPSEGALELVYGDVTDYRSLVDACF-------G-CHVIFH   71 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~-~d~vih   71 (334)
                      ++|||||+|.||.++++.|+++|++|++++|+....  .......+++++.+|++|.+++.++++       + +|+|||
T Consensus       215 ~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~lV~  294 (454)
T 3u0b_A          215 VAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDILVN  294 (454)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCSEEEE
T ss_pred             EEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCceEEEE
Confidence            599999999999999999999999999999864311  000011146889999999998877764       3 899999


Q ss_pred             eccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC---CCcEEEEecccceeccCCCccCCCCCccccccccChH
Q 019878           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (334)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y  142 (334)
                      +||....      ..++++..+++|+.++.++.+++....   ...+||++||...+....+              .+.|
T Consensus       295 nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g--------------~~~Y  360 (454)
T 3u0b_A          295 NAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRG--------------QTNY  360 (454)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTT--------------CHHH
T ss_pred             CCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCC--------------CHHH
Confidence            9998532      222345688999999999999998752   3469999999876543322              2679


Q ss_pred             HHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHH
Q 019878          143 ERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGH  218 (334)
Q Consensus       143 ~~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  218 (334)
                      +.+|...+.+.+.+    ..+|+++.++.||.+..+.....    ...........        .....+...+|+++++
T Consensus       361 aasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~----~~~~~~~~~~~--------~~l~r~g~pedvA~~v  428 (454)
T 3u0b_A          361 ATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAI----PLATREVGRRL--------NSLFQGGQPVDVAELI  428 (454)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC--------------CHHHHHS--------BTTSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhc----chhhHHHHHhh--------ccccCCCCHHHHHHHH
Confidence            99999666666554    45699999999999987642211    00000000000        1112346799999999


Q ss_pred             HHHhhcC---CCCCeEEecCC
Q 019878          219 IAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       219 ~~~~~~~---~~g~~~~i~g~  236 (334)
                      ..++...   -+|+++++.|.
T Consensus       429 ~fL~s~~a~~itG~~i~vdGG  449 (454)
T 3u0b_A          429 AYFASPASNAVTGNTIRVCGQ  449 (454)
T ss_dssp             HHHHCGGGTTCCSCEEEESSS
T ss_pred             HHHhCCccCCCCCcEEEECCc
Confidence            9988643   36899999754

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.79  E-value=1.3e-18  Score=145.56  Aligned_cols=209  Identities=20%  Similarity=0.232  Sum_probs=148.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC--CCCC-CCCCeEEEEcCCCChhhHHHHhcC--CCEEEEecccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI--SGLP-SEGALELVYGDVTDYRSLVDACFG--CHVIFHTAALV   76 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~-~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vih~a~~~   76 (334)
                      ++|||||++.||.++++.|++.|.+|++.+|+....  +.+. ...++.++.+|++|.+.+.++++.  +|++||+||..
T Consensus        11 valVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNNAGi~   90 (247)
T 4hp8_A           11 KALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNNAGII   90 (247)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEECCCCC
T ss_pred             EEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEECCCCC
Confidence            489999999999999999999999999999975421  0011 113688999999999988877753  99999999974


Q ss_pred             CC------CCCCcccchhhhhHHHHHHHHHHHhc----CCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHH
Q 019878           77 EP------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (334)
Q Consensus        77 ~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK  146 (334)
                      ..      ..++++..+++|+.++..+.+++.++    +.-.++|++||.........              ...|+.||
T Consensus        91 ~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~--------------~~~Y~asK  156 (247)
T 4hp8_A           91 RRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIR--------------VPSYTAAK  156 (247)
T ss_dssp             CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSS--------------CHHHHHHH
T ss_pred             CCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCC--------------ChHHHHHH
Confidence            32      23456778999999999999986553    22468999999765543322              25699999


Q ss_pred             HHHHHHHH----HHhhcCCCEEEEecCceecCCCCCchhHHH-HHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHH
Q 019878          147 AVADKIAL----QAASEGLPIVPVYPGVIYGPGKLTTGNLVA-KLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAA  221 (334)
Q Consensus       147 ~~~E~~~~----~~~~~g~~~~ilR~~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~  221 (334)
                      .....+.+    ++.++|+++..+-||.+-.+..   ..... ....+.+....|        ..-+...+|+|.+++.+
T Consensus       157 aav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~---~~~~~~~~~~~~~~~~~P--------lgR~g~peeiA~~v~fL  225 (247)
T 4hp8_A          157 HGVAGLTKLLANEWAAKGINVNAIAPGYIETNNT---EALRADAARNKAILERIP--------AGRWGHSEDIAGAAVFL  225 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGG---HHHHTSHHHHHHHHTTCT--------TSSCBCTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcch---hhcccCHHHHHHHHhCCC--------CCCCcCHHHHHHHHHHH
Confidence            97666555    4557799999999999976532   11110 111122222222        11255689999999998


Q ss_pred             hhcC---CCCCeEEecC
Q 019878          222 MEKG---RSGERYLLTG  235 (334)
Q Consensus       222 ~~~~---~~g~~~~i~g  235 (334)
                      +...   -+|+++.+.|
T Consensus       226 aSd~a~~iTG~~i~VDG  242 (247)
T 4hp8_A          226 SSAAADYVHGAILNVDG  242 (247)
T ss_dssp             TSGGGTTCCSCEEEEST
T ss_pred             hCchhcCCcCCeEEECc
Confidence            8653   3688998864

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.79  E-value=3.6e-19  Score=151.64  Aligned_cols=211  Identities=18%  Similarity=0.159  Sum_probs=148.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      ++|||||++.||.++++.|++.|++|++.+|+.+..+....  ..++..+.+|++|.+++.++++       ++|++||+
T Consensus        31 valVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNN  110 (273)
T 4fgs_A           31 IAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVN  110 (273)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred             EEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            48999999999999999999999999999998754322110  1367889999999998877764       48999999


Q ss_pred             ccccCC------CCCCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEecccceeccCCCccCCCCCccccccccChHHHH
Q 019878           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (334)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (334)
                      ||....      ..++++..+++|+.++..+++++.+... -.++|++||.......+.              ...|+.+
T Consensus       111 AG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~--------------~~~Y~as  176 (273)
T 4fgs_A          111 AGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPA--------------FSVYAAS  176 (273)
T ss_dssp             CCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTT--------------CHHHHHH
T ss_pred             CCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCC--------------chHHHHH
Confidence            997322      2235677899999999999999987631 137999999765543322              2669999


Q ss_pred             HHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCc---hhHH-HHHHHHHHcCCCCccccCCCCceeeeeHHHHHHH
Q 019878          146 KAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTT---GNLV-AKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDG  217 (334)
Q Consensus       146 K~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  217 (334)
                      |.....+.+.+    .++|+++..+.||.+-.+.....   ...- ..+........+..         -+...+|+|.+
T Consensus       177 Kaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~Plg---------R~g~peeiA~~  247 (273)
T 4fgs_A          177 KAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMG---------RVGRAEEVAAA  247 (273)
T ss_dssp             HHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTS---------SCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCC---------CCcCHHHHHHH
Confidence            99877766654    45699999999999977642111   0001 11122222222211         24568999999


Q ss_pred             HHHHhhcC---CCCCeEEecC
Q 019878          218 HIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       218 ~~~~~~~~---~~g~~~~i~g  235 (334)
                      ++.++...   -+|+++.+.|
T Consensus       248 v~FLaSd~a~~iTG~~i~VDG  268 (273)
T 4fgs_A          248 ALFLASDDSSFVTGAELFVDG  268 (273)
T ss_dssp             HHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHhCchhcCccCCeEeECc
Confidence            99998643   3699999864

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.79  E-value=1.3e-20  Score=166.29  Aligned_cols=167  Identities=14%  Similarity=0.077  Sum_probs=122.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC-------eEEEEEcCCC--CC----CCCCCCCCeEEEEcCCCChhhHHHHhcCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH-------SVRALVRRTS--DI----SGLPSEGALELVYGDVTDYRSLVDACFGCH   67 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~-------~V~~~~r~~~--~~----~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d   67 (334)
                      |||+||||+||||++++..|+++|+       +|+++++.+.  +.    ..+.. ..+.++ +|+.+.+.+.++++++|
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~-~~~~~~-~di~~~~~~~~a~~~~D   82 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELED-CAFPLL-AGLEATDDPKVAFKDAD   82 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHT-TTCTTE-EEEEEESCHHHHTTTCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhc-cccccc-CCeEeccChHHHhCCCC
Confidence            5899999999999999999999886       8999988641  00    01110 012333 57777777888899999


Q ss_pred             EEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCC-cEEEEecccce-eccCCCccCCCCC-ccccccccChHHH
Q 019878           68 VIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV-EKIIYTSSFFA-LGSTDGYIADENQ-VHEEKYFCTQYER  144 (334)
Q Consensus        68 ~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~v~~Ss~~v-~~~~~~~~~~e~~-~~~~~~~~~~Y~~  144 (334)
                      +|||+||.......++..+++.|+.++.+++++++++.+. .+++++|+... ...    ...+.. ..+   +.+.|+.
T Consensus        83 ~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~----~~~~~~~~~~---p~~~yg~  155 (327)
T 1y7t_A           83 YALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNAL----IAYKNAPGLN---PRNFTAM  155 (327)
T ss_dssp             EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHH----HHHHTCTTSC---GGGEEEC
T ss_pred             EEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHH----HHHHHcCCCC---hhheecc
Confidence            9999999865434556778999999999999999998313 48888886531 111    011111 112   2467999


Q ss_pred             HHHHHHHHHHHHhh-cCCCEEEEecCceecCCC
Q 019878          145 SKAVADKIALQAAS-EGLPIVPVYPGVIYGPGK  176 (334)
Q Consensus       145 sK~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~  176 (334)
                      +|..+|++...+.+ .|++.+++|+++|||++.
T Consensus       156 tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~  188 (327)
T 1y7t_A          156 TRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHS  188 (327)
T ss_dssp             CHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred             chHHHHHHHHHHHHHhCcChhheeeeEEEcCCC
Confidence            99999999888765 599999999999999864

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.77  E-value=5.1e-18  Score=144.58  Aligned_cols=210  Identities=12%  Similarity=0.039  Sum_probs=146.0

Q ss_pred             cEEEEcCCC--hhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----C--CCCCeEEEEcCCCChhhHHHHhc-------CC
Q 019878            2 KILVSGASG--YLGGRLCHALLKQGHSVRALVRRTSDISGL----P--SEGALELVYGDVTDYRSLVDACF-------GC   66 (334)
Q Consensus         2 ~ilItG~tG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~--~~~~v~~~~~Dl~d~~~~~~~~~-------~~   66 (334)
                      ++|||||+|  .||.++++.|+++|++|++.+|+++..+.+    .  ...++.++.+|++|.+++.++++       ++
T Consensus         8 ~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   87 (256)
T 4fs3_A            8 TYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVGNI   87 (256)
T ss_dssp             EEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred             EEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            589999987  899999999999999999999986543211    1  11368899999999988877664       58


Q ss_pred             CEEEEeccccCC-------CCC---CcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCcccc
Q 019878           67 HVIFHTAALVEP-------WLP---DPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEE  135 (334)
Q Consensus        67 d~vih~a~~~~~-------~~~---~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~  135 (334)
                      |++||+||....       .+.   ++...+++|+.++..+.+.+.... .-.++|++||.......+.           
T Consensus        88 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~~-----------  156 (256)
T 4fs3_A           88 DGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQN-----------  156 (256)
T ss_dssp             SEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCTT-----------
T ss_pred             CEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCccc-----------
Confidence            999999996321       111   223456789999988888887652 2248999999765433221           


Q ss_pred             ccccChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeH
Q 019878          136 KYFCTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHV  211 (334)
Q Consensus       136 ~~~~~~Y~~sK~~~E~~~~~----~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  211 (334)
                         ...|+.+|...+.+.+.    +.++|+++..+.||.+-.+...... .............+..         -+...
T Consensus       157 ---~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~-~~~~~~~~~~~~~Pl~---------R~g~p  223 (256)
T 4fs3_A          157 ---YNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVG-GFNTILKEIKERAPLK---------RNVDQ  223 (256)
T ss_dssp             ---THHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT-THHHHHHHHHHHSTTS---------SCCCH
T ss_pred             ---chhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhcc-CCHHHHHHHHhcCCCC---------CCcCH
Confidence               36799999977766554    4567999999999998765432111 1122222222222221         24569


Q ss_pred             HHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          212 DDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       212 ~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +|+|++++.++...   -+|+++.+.|
T Consensus       224 eevA~~v~fL~Sd~a~~iTG~~i~VDG  250 (256)
T 4fs3_A          224 VEVGKTAAYLLSDLSSGVTGENIHVDS  250 (256)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHhCchhcCccCCEEEECc
Confidence            99999999988643   3689998864

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.77  E-value=1.7e-17  Score=144.60  Aligned_cols=212  Identities=10%  Similarity=0.055  Sum_probs=139.8

Q ss_pred             cEEEEcCC--ChhhHHHHHHHHhCCCeEEEEEcC-----------CCCCCCCCCC--CC----eEEEEcCC--------C
Q 019878            2 KILVSGAS--GYLGGRLCHALLKQGHSVRALVRR-----------TSDISGLPSE--GA----LELVYGDV--------T   54 (334)
Q Consensus         2 ~ilItG~t--G~iG~~l~~~L~~~g~~V~~~~r~-----------~~~~~~~~~~--~~----v~~~~~Dl--------~   54 (334)
                      ++|||||+  |+||.++++.|+++|++|++++|+           ..+.+.+...  ..    ...+.+|+        .
T Consensus        10 ~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~   89 (297)
T 1d7o_A           10 RAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPEDVP   89 (297)
T ss_dssp             EEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGGGSC
T ss_pred             EEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccchhhhh
Confidence            59999999  999999999999999999999854           2222211110  01    24444442        2


Q ss_pred             ----C--------hhhHHHHh-------cCCCEEEEeccccC----C----CCCCcccchhhhhHHHHHHHHHHHhcCC-
Q 019878           55 ----D--------YRSLVDAC-------FGCHVIFHTAALVE----P----WLPDPSRFFAVNVEGLKNVVQAAKETKT-  106 (334)
Q Consensus        55 ----d--------~~~~~~~~-------~~~d~vih~a~~~~----~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~-  106 (334)
                          |        .+++.+++       .++|++||+||...    +    ..++++..+++|+.++.++++++.+... 
T Consensus        90 ~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~  169 (297)
T 1d7o_A           90 EDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNP  169 (297)
T ss_dssp             HHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE
T ss_pred             hhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhcc
Confidence                1        33444433       35899999998532    1    1223456889999999999999987521 


Q ss_pred             CcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHh----h-cCCCEEEEecCceecCCCCCchh
Q 019878          107 VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA----S-EGLPIVPVYPGVIYGPGKLTTGN  181 (334)
Q Consensus       107 ~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~-~g~~~~ilR~~~v~G~~~~~~~~  181 (334)
                      ..++|++||...+...+..             ...|+.+|.+.+.+.+.+.    + +|+++..++||.+.++..... .
T Consensus       170 ~g~iv~isS~~~~~~~~~~-------------~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~-~  235 (297)
T 1d7o_A          170 GGASISLTYIASERIIPGY-------------GGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI-G  235 (297)
T ss_dssp             EEEEEEEECGGGTSCCTTC-------------TTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC-S
T ss_pred             CceEEEEeccccccCCCCc-------------chHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhc-c
Confidence            1589999997665432211             1369999999888777643    2 699999999999999864321 1


Q ss_pred             HHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcC---CCCCeEEecCC
Q 019878          182 LVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~---~~g~~~~i~g~  236 (334)
                      ....+........+.         ..+..++|+|+++..++...   ..|+++++.|.
T Consensus       236 ~~~~~~~~~~~~~p~---------~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG  284 (297)
T 1d7o_A          236 FIDTMIEYSYNNAPI---------QKTLTADEVGNAAAFLVSPLASAITGATIYVDNG  284 (297)
T ss_dssp             HHHHHHHHHHHHSSS---------CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             ccHHHHHHhhccCCC---------CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            112222222111111         13567999999999988643   36889999653

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.76  E-value=6.7e-18  Score=155.87  Aligned_cols=195  Identities=19%  Similarity=0.235  Sum_probs=144.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCC-------C-CCCeEEEEcCCCChhhHHHHhcC------C
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLP-------S-EGALELVYGDVTDYRSLVDACFG------C   66 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-------~-~~~v~~~~~Dl~d~~~~~~~~~~------~   66 (334)
                      ++|||||+|+||.++++.|.++|+ +|++++|+........       . ..++.++.+|++|.+++.++++.      +
T Consensus       241 ~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g~l  320 (496)
T 3mje_A          241 SVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDAPL  320 (496)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTSCE
T ss_pred             EEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            589999999999999999999998 7888888753322110       0 12689999999999999988853      7


Q ss_pred             CEEEEecccc-CC------CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           67 HVIFHTAALV-EP------WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        67 d~vih~a~~~-~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      |+|||+||.. ..      ..++....+++|+.++.++.+.+.+. ...+||++||...+-...+              .
T Consensus       321 d~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~-~~~~iV~~SS~a~~~g~~g--------------~  385 (496)
T 3mje_A          321 TAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL-DLDAFVLFSSGAAVWGSGG--------------Q  385 (496)
T ss_dssp             EEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS-CCSEEEEEEEHHHHTTCTT--------------C
T ss_pred             eEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc-CCCEEEEEeChHhcCCCCC--------------c
Confidence            9999999975 22      11234568899999999999999987 6789999999765433221              2


Q ss_pred             ChHHHHHHHHHHHHHHHhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHH
Q 019878          140 TQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHI  219 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  219 (334)
                      ..|+.+|...+.+.+++..+|++++++.||.+.+.+......    .......           .....+..++.++++.
T Consensus       386 ~~YaAaKa~ldala~~~~~~Gi~v~sV~pG~w~~~gm~~~~~----~~~~l~~-----------~g~~~l~pe~~~~~l~  450 (496)
T 3mje_A          386 PGYAAANAYLDALAEHRRSLGLTASSVAWGTWGEVGMATDPE----VHDRLVR-----------QGVLAMEPEHALGALD  450 (496)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCEEEEECEESSSCC----------CHHHHH-----------TTEEEECHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCeEEEEECCcccCCccccChH----HHHHHHh-----------cCCCCCCHHHHHHHHH
Confidence            669999999999998888889999999999887765321110    0011111           1123567899999999


Q ss_pred             HHhhcCC
Q 019878          220 AAMEKGR  226 (334)
Q Consensus       220 ~~~~~~~  226 (334)
                      .++..+.
T Consensus       451 ~~l~~~~  457 (496)
T 3mje_A          451 QMLENDD  457 (496)
T ss_dssp             HHHHHTC
T ss_pred             HHHcCCC
Confidence            9998754

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.75  E-value=8.1e-18  Score=147.83  Aligned_cols=195  Identities=15%  Similarity=0.092  Sum_probs=136.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC---------CC----CCCCCCCeEEEEcCCCChhhHHHHh-----
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD---------IS----GLPSEGALELVYGDVTDYRSLVDAC-----   63 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~---------~~----~~~~~~~v~~~~~Dl~d~~~~~~~~-----   63 (334)
                      ++|||||+|+||.++++.|+++|++|++.++....         ..    .+... . ....+|+.|.+++.+++     
T Consensus        11 ~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~-~-~~~~~D~~~~~~~~~~~~~~~~   88 (319)
T 1gz6_A           11 VVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR-G-GKAVANYDSVEAGEKLVKTALD   88 (319)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT-T-CEEEEECCCGGGHHHHHHHHHH
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhh-C-CeEEEeCCCHHHHHHHHHHHHH
Confidence            59999999999999999999999999998764221         10    00000 1 12357999988765554     


Q ss_pred             --cCCCEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccce-eccCCCccCCCCC
Q 019878           64 --FGCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFA-LGSTDGYIADENQ  131 (334)
Q Consensus        64 --~~~d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v-~~~~~~~~~~e~~  131 (334)
                        .++|+|||+||....      ..++++..+++|+.++.++++++...   .+..++|++||... ++..         
T Consensus        89 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~---------  159 (319)
T 1gz6_A           89 TFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF---------  159 (319)
T ss_dssp             HTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT---------
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCC---------
Confidence              358999999997432      12235568899999999999888442   14579999999654 4422         


Q ss_pred             ccccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCcee
Q 019878          132 VHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFS  207 (334)
Q Consensus       132 ~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (334)
                            +...|+.+|.+.+.+.+.+.    ++|+++.+++|+.+ .+..   ...+.                  .....
T Consensus       160 ------~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~---~~~~~------------------~~~~~  211 (319)
T 1gz6_A          160 ------GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMT---ETVMP------------------EDLVE  211 (319)
T ss_dssp             ------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTT---GGGSC------------------HHHHH
T ss_pred             ------CCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccc---cccCC------------------hhhhc
Confidence                  13679999999998887764    35899999999986 3211   10000                  01123


Q ss_pred             eeeHHHHHHHHHHHhhcC--CCCCeEEecC
Q 019878          208 FCHVDDVVDGHIAAMEKG--RSGERYLLTG  235 (334)
Q Consensus       208 ~i~v~D~a~a~~~~~~~~--~~g~~~~i~g  235 (334)
                      ++.++|+|++++.++..+  ..|++|++.|
T Consensus       212 ~~~p~dvA~~~~~l~s~~~~~tG~~~~v~G  241 (319)
T 1gz6_A          212 ALKPEYVAPLVLWLCHESCEENGGLFEVGA  241 (319)
T ss_dssp             HSCGGGTHHHHHHHTSTTCCCCSCEEEEET
T ss_pred             cCCHHHHHHHHHHHhCchhhcCCCEEEECC
Confidence            567899999999988754  2688888864

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.71  E-value=5.6e-17  Score=151.39  Aligned_cols=195  Identities=17%  Similarity=0.161  Sum_probs=139.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCe-EEEE-EcCCCC----------CCCCCC--------CCCeEEEEcCCCChhhHHH
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHS-VRAL-VRRTSD----------ISGLPS--------EGALELVYGDVTDYRSLVD   61 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~-V~~~-~r~~~~----------~~~~~~--------~~~v~~~~~Dl~d~~~~~~   61 (334)
                      ++|||||+|.||.++++.|+++|++ |+++ +|+...          .+.+.+        ..++.++.+|++|.+++.+
T Consensus       253 ~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~  332 (525)
T 3qp9_A          253 TVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEAAAR  332 (525)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHHHHH
T ss_pred             EEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHHHHH
Confidence            5899999999999999999999987 5555 777532          111100        0258999999999999998


Q ss_pred             HhcC------CCEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcCC----CcEEEEecccceeccCCCc
Q 019878           62 ACFG------CHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT----VEKIIYTSSFFALGSTDGY  125 (334)
Q Consensus        62 ~~~~------~d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~----~~~~v~~Ss~~v~~~~~~~  125 (334)
                      +++.      +|+|||+||....      ..++....+++|+.|+.++.+++.....    ..+||++||...+-...+ 
T Consensus       333 ~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~~g-  411 (525)
T 3qp9_A          333 LLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGGAG-  411 (525)
T ss_dssp             HHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCCTT-
T ss_pred             HHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCCCC-
Confidence            8864      6999999997432      1123456889999999999999998731    579999999776543322 


Q ss_pred             cCCCCCccccccccChHHHHHHHHHHHHHHHhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCc
Q 019878          126 IADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDR  205 (334)
Q Consensus       126 ~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (334)
                                   ...|+.+|...+.+..++..+|++++++.||.+ +.+-.. .......+.   ..           .
T Consensus       412 -------------~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~-~tgm~~-~~~~~~~~~---~~-----------g  462 (525)
T 3qp9_A          412 -------------QGAYAAGTAFLDALAGQHRADGPTVTSVAWSPW-EGSRVT-EGATGERLR---RL-----------G  462 (525)
T ss_dssp             -------------CHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCB-TTSGGG-SSHHHHHHH---HT-----------T
T ss_pred             -------------CHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcc-cccccc-chhhHHHHH---hc-----------C
Confidence                         266999999999987766667999999999998 322110 011111111   11           1


Q ss_pred             eeeeeHHHHHHHHHHHhhcCC
Q 019878          206 FSFCHVDDVVDGHIAAMEKGR  226 (334)
Q Consensus       206 ~~~i~v~D~a~a~~~~~~~~~  226 (334)
                      ...+..+++++++..++..+.
T Consensus       463 ~~~l~pee~a~~l~~~l~~~~  483 (525)
T 3qp9_A          463 LRPLAPATALTALDTALGHGD  483 (525)
T ss_dssp             BCCBCHHHHHHHHHHHHHHTC
T ss_pred             CCCCCHHHHHHHHHHHHhCCC
Confidence            135679999999999998753

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.66  E-value=7.2e-16  Score=135.68  Aligned_cols=217  Identities=12%  Similarity=0.039  Sum_probs=119.9

Q ss_pred             cEEEEcC--CChhhHHHHHHHHhCCCeEEEEEcCC-----------CCCCC---------------CCCCC----CeEEE
Q 019878            2 KILVSGA--SGYLGGRLCHALLKQGHSVRALVRRT-----------SDISG---------------LPSEG----ALELV   49 (334)
Q Consensus         2 ~ilItG~--tG~iG~~l~~~L~~~g~~V~~~~r~~-----------~~~~~---------------~~~~~----~v~~~   49 (334)
                      ++|||||  +|+||.++++.|+++|++|++++|++           .....               +....    ...++
T Consensus        11 ~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (319)
T 2ptg_A           11 TAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFDKIY   90 (319)
T ss_dssp             EEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CCSEEE
T ss_pred             EEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccccccccc
Confidence            4999999  89999999999999999999998642           11111               00000    13555


Q ss_pred             EcCC------------CC--------hhhHHHHh-------cCCCEEEEeccccC----C----CCCCcccchhhhhHHH
Q 019878           50 YGDV------------TD--------YRSLVDAC-------FGCHVIFHTAALVE----P----WLPDPSRFFAVNVEGL   94 (334)
Q Consensus        50 ~~Dl------------~d--------~~~~~~~~-------~~~d~vih~a~~~~----~----~~~~~~~~~~~n~~~~   94 (334)
                      .+|+            +|        .+++.+++       .++|++||+||...    +    ..+++...+++|+.++
T Consensus        91 ~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~  170 (319)
T 2ptg_A           91 PLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSF  170 (319)
T ss_dssp             ECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHH
T ss_pred             cccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHHH
Confidence            5553            22        22444433       35899999999632    1    1123456889999999


Q ss_pred             HHHHHHHHhcCC-CcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHH----hh-cCCCEEEEec
Q 019878           95 KNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA----AS-EGLPIVPVYP  168 (334)
Q Consensus        95 ~~l~~~~~~~~~-~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~----~~-~g~~~~ilR~  168 (334)
                      .++++++.+... -.++|++||...+...+..             ...|+.+|.+.+.+.+.+    .+ +|+++..++|
T Consensus       171 ~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~-------------~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~P  237 (319)
T 2ptg_A          171 VSLLQHFLPLMKEGGSALALSYIASEKVIPGY-------------GGGMSSAKAALESDCRTLAFEAGRARAVRVNCISA  237 (319)
T ss_dssp             HHHHHHHGGGEEEEEEEEEEEECC-------------------------------THHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             HHHHHHHHHHHhcCceEEEEeccccccccCcc-------------chhhHHHHHHHHHHHHHHHHHhccccCeeEEEEee
Confidence            999999987621 1589999998765432110             135999999887776654    33 6999999999


Q ss_pred             CceecCCCCCchh-HHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcC---CCCCeEEecCC
Q 019878          169 GVIYGPGKLTTGN-LVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       169 ~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~---~~g~~~~i~g~  236 (334)
                      |.+..+....... ....+..... .    ..........+..++|+|++++.++...   ..|+++.+.|.
T Consensus       238 G~v~T~~~~~~~~~~~~~~~~~~~-~----~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG  304 (319)
T 2ptg_A          238 GPLKSRAASAIGKAGDKTFIDLAI-D----YSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNG  304 (319)
T ss_dssp             CCCC------------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CCccChhhhhcccccchhhHHHHH-H----HHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence            9997763211000 0000000000 0    0000001123568999999999998753   36889999643

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.65  E-value=2e-15  Score=132.66  Aligned_cols=213  Identities=15%  Similarity=0.088  Sum_probs=135.3

Q ss_pred             cEEEEcC--CChhhHHHHHHHHhCCCeEEEEEcCC-----------CCCC---CCCCCC---CeEEEEcCC---------
Q 019878            2 KILVSGA--SGYLGGRLCHALLKQGHSVRALVRRT-----------SDIS---GLPSEG---ALELVYGDV---------   53 (334)
Q Consensus         2 ~ilItG~--tG~iG~~l~~~L~~~g~~V~~~~r~~-----------~~~~---~~~~~~---~v~~~~~Dl---------   53 (334)
                      ++|||||  +|+||.++++.|+++|++|++++|++           ....   .+....   .+.++.+|+         
T Consensus        11 ~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~   90 (315)
T 2o2s_A           11 TAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKPEDVP   90 (315)
T ss_dssp             EEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSSTTSSC
T ss_pred             EEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccccchhh
Confidence            4999999  89999999999999999999998642           1111   111100   134555443         


Q ss_pred             ---CC--------hhhHHHHh-------cCCCEEEEeccccC----C----CCCCcccchhhhhHHHHHHHHHHHhcCC-
Q 019878           54 ---TD--------YRSLVDAC-------FGCHVIFHTAALVE----P----WLPDPSRFFAVNVEGLKNVVQAAKETKT-  106 (334)
Q Consensus        54 ---~d--------~~~~~~~~-------~~~d~vih~a~~~~----~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~-  106 (334)
                         +|        .+++.+++       .++|++||+||...    +    ..+++...+++|+.++.++++++..... 
T Consensus        91 ~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~  170 (315)
T 2o2s_A           91 QDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNE  170 (315)
T ss_dssp             HHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEE
T ss_pred             hhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhc
Confidence               22        33444443       36899999999642    1    1123456789999999999999987521 


Q ss_pred             CcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHH----hh-cCCCEEEEecCceecCCCC----
Q 019878          107 VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA----AS-EGLPIVPVYPGVIYGPGKL----  177 (334)
Q Consensus       107 ~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~----~~-~g~~~~ilR~~~v~G~~~~----  177 (334)
                      -.++|++||...+......             ...|+.+|.+.+.+.+.+    .+ +|+++..++||.|..+...    
T Consensus       171 ~g~Iv~isS~~~~~~~~~~-------------~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~  237 (315)
T 2o2s_A          171 GGSAVTLSYLAAERVVPGY-------------GGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGK  237 (315)
T ss_dssp             EEEEEEEEEGGGTSCCTTC-------------CTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTC
T ss_pred             CCEEEEEecccccccCCCc-------------cHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccc
Confidence            1589999998765432211             136999999888777654    33 6999999999998654100    


Q ss_pred             -CchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcC---CCCCeEEecCC
Q 019878          178 -TTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       178 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~---~~g~~~~i~g~  236 (334)
                       ....+........... .+        ...+...+|+|+++..++...   ..|+++.+.|.
T Consensus       238 ~~~~~~~~~~~~~~~~~-~p--------~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  291 (315)
T 2o2s_A          238 SGEKSFIDYAIDYSYNN-AP--------LRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNG  291 (315)
T ss_dssp             SSSSCHHHHHHHHHHHH-SS--------SCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             cccchhHHHHHHHHhcc-CC--------CCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCC
Confidence             0000111111111111 11        112567999999999998743   36889988654

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.64  E-value=1.2e-15  Score=134.73  Aligned_cols=159  Identities=11%  Similarity=0.017  Sum_probs=115.0

Q ss_pred             cEEEEcCCC--hhhHHHHHHHHhCCCeEEEEEcCC---------CCCCC--------CCCCCCeEEEEcCCCCh--h---
Q 019878            2 KILVSGASG--YLGGRLCHALLKQGHSVRALVRRT---------SDISG--------LPSEGALELVYGDVTDY--R---   57 (334)
Q Consensus         2 ~ilItG~tG--~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~--------~~~~~~v~~~~~Dl~d~--~---   57 (334)
                      ++|||||++  .||.++++.|+++|++|++.+|++         ++...        ......+.++.+|+.+.  +   
T Consensus         4 ~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~   83 (329)
T 3lt0_A            4 ICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDID   83 (329)
T ss_dssp             EEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGGCC
T ss_pred             EEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhhhh
Confidence            589999875  999999999999999999776553         11110        01112478899999877  6   


Q ss_pred             ---------------hHHHHhc-------CCCEEEEeccccC----C----CCCCcccchhhhhHHHHHHHHHHHhcCC-
Q 019878           58 ---------------SLVDACF-------GCHVIFHTAALVE----P----WLPDPSRFFAVNVEGLKNVVQAAKETKT-  106 (334)
Q Consensus        58 ---------------~~~~~~~-------~~d~vih~a~~~~----~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~-  106 (334)
                                     ++.++++       .+|++||+||...    +    ..+++...+++|+.++..+.+++..... 
T Consensus        84 ~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~  163 (329)
T 3lt0_A           84 EETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKP  163 (329)
T ss_dssp             HHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE
T ss_pred             hhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Confidence                           5555443       5899999999631    1    1123556889999999999999987621 


Q ss_pred             CcEEEEecccceeccCCCccCCCCCccccccccC-hHHHHHHHHHHHHHH----Hhh-cCCCEEEEecCceecC
Q 019878          107 VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT-QYERSKAVADKIALQ----AAS-EGLPIVPVYPGVIYGP  174 (334)
Q Consensus       107 ~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~-~Y~~sK~~~E~~~~~----~~~-~g~~~~ilR~~~v~G~  174 (334)
                      -.++|++||...+...+.              .+ .|+.||++.+.+.+.    +.+ +|+++..+.||.|..+
T Consensus       164 ~g~Iv~isS~~~~~~~~~--------------~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~  223 (329)
T 3lt0_A          164 QSSIISLTYHASQKVVPG--------------YGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR  223 (329)
T ss_dssp             EEEEEEEECGGGTSCCTT--------------CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCH
T ss_pred             CCeEEEEeCccccCCCCc--------------chHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeech
Confidence            148999999765543221              23 699999988776665    345 6999999999998754

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.63  E-value=2.2e-16  Score=150.34  Aligned_cols=195  Identities=16%  Similarity=0.064  Sum_probs=129.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCC---------CCCCC----CCCCCCeEEEEcCCCChhhHHHHhc----
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT---------SDISG----LPSEGALELVYGDVTDYRSLVDACF----   64 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~----   64 (334)
                      ++|||||+|.||.++++.|+++|++|++++|..         ...+.    +.. ... ...+|+.|.+++.++++    
T Consensus        21 ~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~-~~~-~~~~D~~d~~~~~~~~~~~~~   98 (613)
T 3oml_A           21 VAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRK-AGG-EAVADYNSVIDGAKVIETAIK   98 (613)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHH-TTC-CEEECCCCGGGHHHHHC----
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHH-hCC-eEEEEeCCHHHHHHHHHHHHH
Confidence            599999999999999999999999999998832         21110    000 011 23479999988877765    


Q ss_pred             ---CCCEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCc
Q 019878           65 ---GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQV  132 (334)
Q Consensus        65 ---~~d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~  132 (334)
                         .+|++||+||....      ..++++..+++|+.++.++++++...   .+..++|++||...+.....        
T Consensus        99 ~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~~--------  170 (613)
T 3oml_A           99 AFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFG--------  170 (613)
T ss_dssp             ------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCTT--------
T ss_pred             HCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCC--------
Confidence               48999999997432      22345678899999999999998432   24569999999765533221        


Q ss_pred             cccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceee
Q 019878          133 HEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSF  208 (334)
Q Consensus       133 ~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (334)
                            ...|+.+|.+.+.+.+.+.    ++|+++..+.|+.+- +..               .+..+      ......
T Consensus       171 ------~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t-~~~---------------~~~~~------~~~~~~  222 (613)
T 3oml_A          171 ------QVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAAS-RMT---------------EGILP------DILFNE  222 (613)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC----------------------CCCCC------HHHHTT
T ss_pred             ------ChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCC-hhh---------------hhccc------hhhhhc
Confidence                  3669999998888777654    458999999998541 110               01000      011234


Q ss_pred             eeHHHHHHHHHHHhhcC--CCCCeEEec
Q 019878          209 CHVDDVVDGHIAAMEKG--RSGERYLLT  234 (334)
Q Consensus       209 i~v~D~a~a~~~~~~~~--~~g~~~~i~  234 (334)
                      +..+|+|.+++.++...  ..|+++++.
T Consensus       223 ~~pedvA~~v~~L~s~~~~~tG~~i~vd  250 (613)
T 3oml_A          223 LKPKLIAPVVAYLCHESCEDNGSYIESA  250 (613)
T ss_dssp             CCGGGTHHHHHHTTSTTCCCCSCEEEEE
T ss_pred             CCHHHHHHHHHHhcCCCcCCCceEEEEC
Confidence            57899999999888654  257777663

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.54  E-value=3.4e-14  Score=138.80  Aligned_cols=195  Identities=20%  Similarity=0.292  Sum_probs=141.9

Q ss_pred             cEEEEcCCChhhHHHHHHHH-hCCC-eEEEEEcCCCCCCCCC-------C-CCCeEEEEcCCCChhhHHHHhcC------
Q 019878            2 KILVSGASGYLGGRLCHALL-KQGH-SVRALVRRTSDISGLP-------S-EGALELVYGDVTDYRSLVDACFG------   65 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~-~~g~-~V~~~~r~~~~~~~~~-------~-~~~v~~~~~Dl~d~~~~~~~~~~------   65 (334)
                      ++|||||+|.||.++++.|. ++|. +|++++|+....+...       . ..++.++.+|++|.+++.++++.      
T Consensus       532 ~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~~~~  611 (795)
T 3slk_A          532 TVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPDEHP  611 (795)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSC
T ss_pred             ceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhCC
Confidence            58999999999999999999 7897 5899999854322111       1 12688999999999999888753      


Q ss_pred             CCEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           66 CHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        66 ~d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      +|+|||+||....      ..++++..+++|+.|+.++.+++...  . +||++||...+-...+              .
T Consensus       612 id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~--l-~iV~~SS~ag~~g~~g--------------~  674 (795)
T 3slk_A          612 LTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPD--V-ALVLFSSVSGVLGSGG--------------Q  674 (795)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTT--S-EEEEEEETHHHHTCSS--------------C
T ss_pred             CEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhC--C-EEEEEccHHhcCCCCC--------------C
Confidence            6999999998432      22345678899999999999998544  3 9999999775543322              2


Q ss_pred             ChHHHHHHHHHHHHHHHhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHH
Q 019878          140 TQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHI  219 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  219 (334)
                      ..|+.+|...+.+.+++...|++++.+-||.+-.++-   ...........+..          .....+..++..+++.
T Consensus       675 ~~YaAaka~~~alA~~~~~~Gi~v~sI~pG~v~t~g~---~~~~~~~~~~~~~~----------~g~~~l~~~e~~~~~~  741 (795)
T 3slk_A          675 GNYAAANSFLDALAQQRQSRGLPTRSLAWGPWAEHGM---ASTLREAEQDRLAR----------SGLLPISTEEGLSQFD  741 (795)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSCCCH---HHHHHHHHHHHHHH----------TTBCCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCeEEEEECCeECcchh---hccccHHHHHHHHh----------cCCCCCCHHHHHHHHH
Confidence            6699999999999988888899999999998875531   11111111111111          1113456889999999


Q ss_pred             HHhhcCC
Q 019878          220 AAMEKGR  226 (334)
Q Consensus       220 ~~~~~~~  226 (334)
                      .++..+.
T Consensus       742 ~~l~~~~  748 (795)
T 3slk_A          742 AACGGAH  748 (795)
T ss_dssp             HHHTSSC
T ss_pred             HHHhCCC
Confidence            8888754

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.49  E-value=1.7e-14  Score=143.95  Aligned_cols=217  Identities=14%  Similarity=0.114  Sum_probs=141.9

Q ss_pred             cEEEEcCCCh-hhHHHHHHHHhCCCeEEEE-EcCCCCCCC----C----CC-CCCeEEEEcCCCChhhHHHHhc------
Q 019878            2 KILVSGASGY-LGGRLCHALLKQGHSVRAL-VRRTSDISG----L----PS-EGALELVYGDVTDYRSLVDACF------   64 (334)
Q Consensus         2 ~ilItG~tG~-iG~~l~~~L~~~g~~V~~~-~r~~~~~~~----~----~~-~~~v~~~~~Dl~d~~~~~~~~~------   64 (334)
                      ++|||||+|. ||.++++.|+++|++|+++ +|+.+....    +    .. ...+.++.+|++|.+++.++++      
T Consensus       478 vALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~e~~  557 (1688)
T 2pff_A          478 YVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTE  557 (1688)
T ss_dssp             CEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHHSCT
T ss_pred             EEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHHHhc
Confidence            4999999998 9999999999999999998 465544321    1    11 1257889999999988877652      


Q ss_pred             -------CCCEEEEeccccCCC---------CCCcccchhhhhHHHHHHHHHHHh--cC---CCcEEEEecccceeccCC
Q 019878           65 -------GCHVIFHTAALVEPW---------LPDPSRFFAVNVEGLKNVVQAAKE--TK---TVEKIIYTSSFFALGSTD  123 (334)
Q Consensus        65 -------~~d~vih~a~~~~~~---------~~~~~~~~~~n~~~~~~l~~~~~~--~~---~~~~~v~~Ss~~v~~~~~  123 (334)
                             .+|+|||+||.....         .+++...+++|+.++.+++++++.  ..   +..++|++||......  
T Consensus       558 ~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~G--  635 (1688)
T 2pff_A          558 KNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG--  635 (1688)
T ss_dssp             TSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTSS--
T ss_pred             cccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhccC--
Confidence                   489999999974321         122356889999999999998833  21   1248999999654322  


Q ss_pred             CccCCCCCccccccccChHHHHHHHHHHHHHH-Hhh-c--CCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccc
Q 019878          124 GYIADENQVHEEKYFCTQYERSKAVADKIALQ-AAS-E--GLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYI  199 (334)
Q Consensus       124 ~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~-~~~-~--g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (334)
                      .              ...|+.+|++.+.+... +.. .  .+++..+.||.+.|.+-......        ... .  ..
T Consensus       636 g--------------~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~e~--------~~~-~--l~  690 (1688)
T 2pff_A          636 G--------------DGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNI--------IAE-G--IE  690 (1688)
T ss_dssp             C--------------BTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTTTT--------CST-T--TS
T ss_pred             C--------------chHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCchH--------HHH-H--HH
Confidence            0              25699999999988433 322 1  27788889998875321100000        000 0  00


Q ss_pred             cCCCCceeeeeHHHHHHHHHHHhhcC-C---CCCeEEec--CC---CCCHHHHHHHHH
Q 019878          200 GYGNDRFSFCHVDDVVDGHIAAMEKG-R---SGERYLLT--GE---NASFMQIFDMAA  248 (334)
Q Consensus       200 ~~~~~~~~~i~v~D~a~a~~~~~~~~-~---~g~~~~i~--g~---~~s~~e~~~~i~  248 (334)
                      .   ....+...+|+|++++.++... .   .|..+.+.  |.   ...+.++...+.
T Consensus       691 ~---iplR~~sPEEVA~aIlFLaSd~sAs~ITGq~I~VDVDGG~~~~~dl~ella~lr  745 (1688)
T 2pff_A          691 K---MGVRTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVPELKEFTAKLR  745 (1688)
T ss_dssp             S---SSCCCCCCCTTHHHHHHHTSTTHHHHHTTSCCCCCCSCSGGGSSSHHHHHHHHH
T ss_pred             h---CCCCCCCHHHHHHHHHHHhCCCccccccCcEEEEEcCCCeeecCCHHHHHHHHH
Confidence            0   0112347899999999988754 1   47776652  32   235566555443

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.48  E-value=1.7e-13  Score=140.84  Aligned_cols=217  Identities=15%  Similarity=0.145  Sum_probs=143.4

Q ss_pred             cEEEEcCCCh-hhHHHHHHHHhCCCeEEEEE-cCCCCCCC----C----CC-CCCeEEEEcCCCChhhHHHHhc------
Q 019878            2 KILVSGASGY-LGGRLCHALLKQGHSVRALV-RRTSDISG----L----PS-EGALELVYGDVTDYRSLVDACF------   64 (334)
Q Consensus         2 ~ilItG~tG~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~~----~----~~-~~~v~~~~~Dl~d~~~~~~~~~------   64 (334)
                      ++|||||+|. ||.++++.|+++|++|++++ |+.+....    +    .. ..++.++.+|++|.+++.++++      
T Consensus       677 vaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~~~~  756 (1887)
T 2uv8_A          677 YVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTE  756 (1887)
T ss_dssp             EEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHSCT
T ss_pred             EEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            4999999999 99999999999999999984 54432210    1    10 1258899999999998877653      


Q ss_pred             -------CCCEEEEeccccCCC---------CCCcccchhhhhHHHHHHHHHHHhcCC-----CcEEEEecccceeccCC
Q 019878           65 -------GCHVIFHTAALVEPW---------LPDPSRFFAVNVEGLKNVVQAAKETKT-----VEKIIYTSSFFALGSTD  123 (334)
Q Consensus        65 -------~~d~vih~a~~~~~~---------~~~~~~~~~~n~~~~~~l~~~~~~~~~-----~~~~v~~Ss~~v~~~~~  123 (334)
                             .+|+|||+||.....         .+++...+++|+.++..+++.++....     ..++|++||...+..  
T Consensus       757 ~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~g--  834 (1887)
T 2uv8_A          757 KNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG--  834 (1887)
T ss_dssp             TTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCSS--
T ss_pred             cccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhccC--
Confidence                   489999999974321         123456889999999999998843311     248999999754432  


Q ss_pred             CccCCCCCccccccccChHHHHHHHHHHH-HHHHhh-c--CCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccc
Q 019878          124 GYIADENQVHEEKYFCTQYERSKAVADKI-ALQAAS-E--GLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYI  199 (334)
Q Consensus       124 ~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~-~~~~~~-~--g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (334)
                      .              ...|+.+|.+.+.+ .+.+.. .  .++++.+.||++.|.+-.........    .... .+   
T Consensus       835 g--------------~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~~~~~----~~~~-~p---  892 (1887)
T 2uv8_A          835 G--------------DGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAE----GIEK-MG---  892 (1887)
T ss_dssp             C--------------BTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----CCTTHH----HHHT-TS---
T ss_pred             C--------------CchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccchhHHH----HHHh-cC---
Confidence            0              25699999999887 444432 1  28899999999985221000001111    1111 11   


Q ss_pred             cCCCCceeeeeHHHHHHHHHHHhhcC----CCCCeEEe---cCC--CCCHHHHHHHHH
Q 019878          200 GYGNDRFSFCHVDDVVDGHIAAMEKG----RSGERYLL---TGE--NASFMQIFDMAA  248 (334)
Q Consensus       200 ~~~~~~~~~i~v~D~a~a~~~~~~~~----~~g~~~~i---~g~--~~s~~e~~~~i~  248 (334)
                           . .+...+|+|++++.++...    ..|..+.+   +|.  ...+.++...+.
T Consensus       893 -----l-r~~sPEEVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~~~~l~el~~~lr  944 (1887)
T 2uv8_A          893 -----V-RTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVPELKEFTAKLR  944 (1887)
T ss_dssp             -----C-CCEEHHHHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTTSSSHHHHHHHHH
T ss_pred             -----C-CCCCHHHHHHHHHHHhCCCccccccCcEEEEECCCCeeccccHHHHHHHHH
Confidence                 0 2347999999999988654    14677766   232  235666655443

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.47  E-value=7.6e-13  Score=135.91  Aligned_cols=216  Identities=14%  Similarity=0.079  Sum_probs=143.1

Q ss_pred             cEEEEcCCCh-hhHHHHHHHHhCCCeEEEEEcC-CCCCC--------CCCC-CCCeEEEEcCCCChhhHHHHhc------
Q 019878            2 KILVSGASGY-LGGRLCHALLKQGHSVRALVRR-TSDIS--------GLPS-EGALELVYGDVTDYRSLVDACF------   64 (334)
Q Consensus         2 ~ilItG~tG~-iG~~l~~~L~~~g~~V~~~~r~-~~~~~--------~~~~-~~~v~~~~~Dl~d~~~~~~~~~------   64 (334)
                      ++|||||+|. ||.++++.|+++|++|++++++ .+...        .+.. ...+.++.+|++|.+++.++++      
T Consensus       654 vaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~~~~  733 (1878)
T 2uv9_A          654 HALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIYDTK  733 (1878)
T ss_dssp             EEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHCSS
T ss_pred             EEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHhh
Confidence            5999999999 9999999999999999998643 32210        1111 1258899999999998877663      


Q ss_pred             -----CCCEEEEeccccCCC---C------CCcccchhhhhHHHHHHHHHHH--hcC---CCcEEEEecccceeccCCCc
Q 019878           65 -----GCHVIFHTAALVEPW---L------PDPSRFFAVNVEGLKNVVQAAK--ETK---TVEKIIYTSSFFALGSTDGY  125 (334)
Q Consensus        65 -----~~d~vih~a~~~~~~---~------~~~~~~~~~n~~~~~~l~~~~~--~~~---~~~~~v~~Ss~~v~~~~~~~  125 (334)
                           .+|+|||+||.....   .      +++...+++|+.++.++++.++  ...   +..+||++||...+...   
T Consensus       734 ~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~gg---  810 (1878)
T 2uv9_A          734 NGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFGN---  810 (1878)
T ss_dssp             SSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSSC---
T ss_pred             cccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccCC---
Confidence                 489999999974321   1      2245688999999999887743  221   12589999997544221   


Q ss_pred             cCCCCCccccccccChHHHHHHHHHHHHHHHh-h---cCCCEEEEecCcee-cCCCCCchhHHHHHHHHHHcCCCCcccc
Q 019878          126 IADENQVHEEKYFCTQYERSKAVADKIALQAA-S---EGLPIVPVYPGVIY-GPGKLTTGNLVAKLMIERFNGRLPGYIG  200 (334)
Q Consensus       126 ~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~g~~~~ilR~~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (334)
                                   ...|+.+|.+.+.+...+. .   .+++++.+.||.+- .+...  .   .......... .+    
T Consensus       811 -------------~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~--~---~~~~~~~~~~-~p----  867 (1878)
T 2uv9_A          811 -------------DGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMS--A---NNLVAEGVEK-LG----  867 (1878)
T ss_dssp             -------------CSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCS--H---HHHTHHHHHT-TT----
T ss_pred             -------------chHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcccc--c---chhhHHHHHh-cC----
Confidence                         1569999999988866432 1   13889999999987 33211  1   0111111111 11    


Q ss_pred             CCCCceeeeeHHHHHHHHHHHhhcCC----CCCeEEe---cCC--CCCHHHHHHHHH
Q 019878          201 YGNDRFSFCHVDDVVDGHIAAMEKGR----SGERYLL---TGE--NASFMQIFDMAA  248 (334)
Q Consensus       201 ~~~~~~~~i~v~D~a~a~~~~~~~~~----~g~~~~i---~g~--~~s~~e~~~~i~  248 (334)
                          . .+...+|+|+++..++....    .|..+.+   +|.  ...+.++...+.
T Consensus       868 ----l-r~~sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~~~l~el~~~lr  919 (1878)
T 2uv9_A          868 ----V-RTFSQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFIPDLKGLMTKLR  919 (1878)
T ss_dssp             ----C-CCBCHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGCTTHHHHHHHHH
T ss_pred             ----C-CCCCHHHHHHHHHHHhCCcccccccCcEEEEEcCCCccccCCHHHHHHHHH
Confidence                0 13479999999998876432    4777766   232  245666665554

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.45  E-value=9.1e-13  Score=116.72  Aligned_cols=203  Identities=11%  Similarity=-0.032  Sum_probs=131.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHh-CCCeEEEEEcCCCCCCCC----------------C-CCCCeEEEEcCCCChhhHHHHh
Q 019878            2 KILVSGASGYLGGRLCHALLK-QGHSVRALVRRTSDISGL----------------P-SEGALELVYGDVTDYRSLVDAC   63 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~----------------~-~~~~v~~~~~Dl~d~~~~~~~~   63 (334)
                      ++|||||++.||.++++.|++ .|++|++++|+.+.....                . ....+..+.+|++|.+++.+++
T Consensus        49 vaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v  128 (405)
T 3zu3_A           49 RVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQLTI  128 (405)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHH
T ss_pred             EEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHH
Confidence            589999999999999999999 999999999876543210                0 1125788999999998877766


Q ss_pred             c-------CCCEEEEeccccC---------------C-------------------------CCCCcccchhhhhHHHH-
Q 019878           64 F-------GCHVIFHTAALVE---------------P-------------------------WLPDPSRFFAVNVEGLK-   95 (334)
Q Consensus        64 ~-------~~d~vih~a~~~~---------------~-------------------------~~~~~~~~~~~n~~~~~-   95 (334)
                      +       ++|++||+||...               +                         ..++++..+++|..+.. 
T Consensus       129 ~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~~~~  208 (405)
T 3zu3_A          129 DAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGEDWQ  208 (405)
T ss_dssp             HHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHHHH
T ss_pred             HHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchhHHH
Confidence            4       4899999998630               1                         11123456677877765 


Q ss_pred             HHHHHHHhcC---CCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHH----Hhhc-CCCEEEEe
Q 019878           96 NVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ----AASE-GLPIVPVY  167 (334)
Q Consensus        96 ~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~----~~~~-g~~~~ilR  167 (334)
                      .+++++....   .-.++|.+||.......+...            ...|+.+|...+.+.+.    +.++ |+++..+-
T Consensus       209 ~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~~------------~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVa  276 (405)
T 3zu3_A          209 MWIDALLDAGVLAEGAQTTAFTYLGEKITHDIYW------------NGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSV  276 (405)
T ss_dssp             HHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTTT------------TSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEE
T ss_pred             HHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCcc------------chHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEE
Confidence            5666554321   114899999976543222110            26799999987776665    4567 99999999


Q ss_pred             cCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCCC
Q 019878          168 PGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSG  228 (334)
Q Consensus       168 ~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g  228 (334)
                      |+.+-.+...... ..+... ..+.. +..         .+-..+|+++++..++...--|
T Consensus       277 PG~i~T~~s~~ip-~~p~y~-~~l~~-~mk---------r~G~~Ed~a~~i~~L~sd~l~~  325 (405)
T 3zu3_A          277 LKAVVSQASSAIP-MMPLYL-SLLFK-VMK---------EKGTHEGCIEQVYSLYKDSLCG  325 (405)
T ss_dssp             CCCCCCHHHHTST-THHHHH-HHHHH-HHH---------HHTCCCCHHHHHHHHHHHTTSS
T ss_pred             eCCCcCchhhcCC-CCcHHH-HHHHH-HHh---------cCCCcHHHHHHHHHHHhccccC
Confidence            9998764211000 011111 11111 111         1223578999999998764333

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.44  E-value=5.5e-13  Score=126.52  Aligned_cols=217  Identities=18%  Similarity=0.150  Sum_probs=144.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC--CCCCC-CCCeEEEEcCC-CChhhHHH-H---hcCCCEEEEec
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI--SGLPS-EGALELVYGDV-TDYRSLVD-A---CFGCHVIFHTA   73 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~-~~~v~~~~~Dl-~d~~~~~~-~---~~~~d~vih~a   73 (334)
                      ++|||||++.||.++++.|+++|++|++.+|+....  ..+.. ...+..+.+|+ .+.+.+.+ +   +..+|++||+|
T Consensus       324 valVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiLVnNA  403 (604)
T 2et6_A          324 VVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDILVNNA  403 (604)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             eEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            489999999999999999999999999988642110  01111 12466677888 55544322 2   34599999999


Q ss_pred             cccCC------CCCCcccchhhhhHHHHHHHHHHHhcC---CCcEEEEecccceeccCCCccCCCCCccccccccChHHH
Q 019878           74 ALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (334)
Q Consensus        74 ~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (334)
                      |....      ..++++..+++|+.++.++.+++..+.   +-.++|++||.........              ...|+.
T Consensus       404 Gi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~--------------~~~Y~a  469 (604)
T 2et6_A          404 GILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFG--------------QANYSS  469 (604)
T ss_dssp             CCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTT--------------BHHHHH
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCC--------------ChhHHH
Confidence            97432      223456789999999999999886542   3469999999765432211              256999


Q ss_pred             HHHHHHHHHHH----HhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHH
Q 019878          145 SKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIA  220 (334)
Q Consensus       145 sK~~~E~~~~~----~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~  220 (334)
                      ||.....+.+.    +.++|+++..+.|+. -.+    ...   ..+.    .          ...+....+|++.++..
T Consensus       470 sKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~----m~~---~~~~----~----------~~~~~~~pe~vA~~v~~  527 (604)
T 2et6_A          470 SKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETA----MTL---SIMR----E----------QDKNLYHADQVAPLLVY  527 (604)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCC----C--------------------------CCSSCGGGTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCc----ccc---ccCc----h----------hhccCCCHHHHHHHHHH
Confidence            99977766655    445799999999983 211    110   0000    0          00123478999999998


Q ss_pred             HhhcC--CCCCeEEecC------------------CCCCHHHHHHHHHHHhCCC
Q 019878          221 AMEKG--RSGERYLLTG------------------ENASFMQIFDMAAVITGTS  254 (334)
Q Consensus       221 ~~~~~--~~g~~~~i~g------------------~~~s~~e~~~~i~~~~g~~  254 (334)
                      ++...  ..|+++.+.|                  ..++..++.+...++....
T Consensus       528 L~s~~~~itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  581 (604)
T 2et6_A          528 LGTDDVPVTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITDFT  581 (604)
T ss_dssp             TTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTCCS
T ss_pred             HhCCccCCCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhccc
Confidence            87643  3577777643                  2367888888888776654

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.42  E-value=1.1e-12  Score=117.35  Aligned_cols=200  Identities=11%  Similarity=-0.045  Sum_probs=128.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHh-CCCeEEEEEcCCCCCCCC----------------CC-CCCeEEEEcCCCChhhHHHHh
Q 019878            2 KILVSGASGYLGGRLCHALLK-QGHSVRALVRRTSDISGL----------------PS-EGALELVYGDVTDYRSLVDAC   63 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~----------------~~-~~~v~~~~~Dl~d~~~~~~~~   63 (334)
                      ++|||||++.||.++++.|++ .|++|++++|+.+.....                .. ...+..+.+|++|.+.+.+++
T Consensus        63 vaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~~~v  142 (422)
T 3s8m_A           63 KVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARAQVI  142 (422)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHH
T ss_pred             EEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHHHHH
Confidence            589999999999999999999 999999999987654321                01 125788999999998876654


Q ss_pred             --------cCCCEEEEecccc---------------CC-------------------------CCCCcccchhhhhHHHH
Q 019878           64 --------FGCHVIFHTAALV---------------EP-------------------------WLPDPSRFFAVNVEGLK   95 (334)
Q Consensus        64 --------~~~d~vih~a~~~---------------~~-------------------------~~~~~~~~~~~n~~~~~   95 (334)
                              .++|++||+||..               .+                         ..++++..+++|..+..
T Consensus       143 ~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~~~~  222 (422)
T 3s8m_A          143 ELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQDW  222 (422)
T ss_dssp             HHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHHH
T ss_pred             HHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhchhHH
Confidence                    3479999999862               01                         01122334556666554


Q ss_pred             -HHHHHHHhcC---CCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHH----HhhcCCCEEEEe
Q 019878           96 -NVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ----AASEGLPIVPVY  167 (334)
Q Consensus        96 -~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~----~~~~g~~~~ilR  167 (334)
                       .+++++....   .-.++|.+||....-..+..            ....|+.||...+.+.+.    +.++|+++..+.
T Consensus       223 ~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~------------~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVa  290 (422)
T 3s8m_A          223 ELWIDALEGAGVLADGARSVAFSYIGTEITWPIY------------WHGALGKAKVDLDRTAQRLNARLAKHGGGANVAV  290 (422)
T ss_dssp             HHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHH------------TSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred             HHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCc------------cchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEE
Confidence             5666654431   12479999997543221110            125699999987776665    445699999999


Q ss_pred             cCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcC
Q 019878          168 PGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG  225 (334)
Q Consensus       168 ~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~  225 (334)
                      ||.+-.+...... ..+..... +.. +..-         .--.+|+++++..++...
T Consensus       291 PG~i~T~~~~~ip-~~~~~~~~-~~~-~m~r---------~G~pEdva~~v~~L~sd~  336 (422)
T 3s8m_A          291 LKSVVTQASAAIP-VMPLYISM-VYK-IMKE---------KGLHEGTIEQLDRLFRER  336 (422)
T ss_dssp             ECCCCCTTGGGST-HHHHHHHH-HHH-HHHH---------TTCCCCHHHHHHHHHHHT
T ss_pred             cCCCcChhhhcCC-CChHHHHH-HHh-hhcC---------CcChHHHHHHHHHHhcch
Confidence            9999776432111 11111111 100 1111         112589999999988754

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.36  E-value=1.5e-11  Score=110.71  Aligned_cols=161  Identities=11%  Similarity=-0.093  Sum_probs=110.2

Q ss_pred             cEEEEcCCChhhHH--HHHHHHhCCCeEEEEEcCCCCCCCC----------------C-CCCCeEEEEcCCCChhhHHHH
Q 019878            2 KILVSGASGYLGGR--LCHALLKQGHSVRALVRRTSDISGL----------------P-SEGALELVYGDVTDYRSLVDA   62 (334)
Q Consensus         2 ~ilItG~tG~iG~~--l~~~L~~~g~~V~~~~r~~~~~~~~----------------~-~~~~v~~~~~Dl~d~~~~~~~   62 (334)
                      ++|||||++.||.+  +++.|.+.|++|++++|+......-                . ....+.++.+|++|.+++.++
T Consensus        62 ~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v~~~  141 (418)
T 4eue_A           62 KVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETKDKV  141 (418)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHHHHH
Confidence            58999999999999  9999999999999999976543210                0 012578999999999887776


Q ss_pred             hc-------CCCEEEEecccc---------------CC-------------------------CCCCcccchhhhhHHHH
Q 019878           63 CF-------GCHVIFHTAALV---------------EP-------------------------WLPDPSRFFAVNVEGLK   95 (334)
Q Consensus        63 ~~-------~~d~vih~a~~~---------------~~-------------------------~~~~~~~~~~~n~~~~~   95 (334)
                      ++       ++|++||+||..               .+                         ..+++...+++|..+..
T Consensus       142 v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~~~~~  221 (418)
T 4eue_A          142 IKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMGGEDW  221 (418)
T ss_dssp             HHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHSSHHH
T ss_pred             HHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhhHHHH
Confidence            53       489999999863               00                         00112234455555444


Q ss_pred             -HHHHHHHhcC---CCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHH----Hhh-cCCCEEEE
Q 019878           96 -NVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ----AAS-EGLPIVPV  166 (334)
Q Consensus        96 -~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~----~~~-~g~~~~il  166 (334)
                       .+++++....   .-.++|.+||....-..+..            ....|+.+|.+.+.+.+.    +.+ +|+++.++
T Consensus       222 ~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~------------~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V  289 (418)
T 4eue_A          222 QEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIY------------REGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVS  289 (418)
T ss_dssp             HHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTT------------TTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEE
T ss_pred             HHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCcc------------ccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEE
Confidence             5555554431   12479999987543222111            126799999987766655    456 79999999


Q ss_pred             ecCceecC
Q 019878          167 YPGVIYGP  174 (334)
Q Consensus       167 R~~~v~G~  174 (334)
                      .|+.+-.+
T Consensus       290 ~PG~v~T~  297 (418)
T 4eue_A          290 VNKALVTK  297 (418)
T ss_dssp             ECCCCCCH
T ss_pred             ECCcCcCh
Confidence            99998764

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.29  E-value=1.6e-12  Score=96.68  Aligned_cols=95  Identities=21%  Similarity=0.164  Sum_probs=76.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPW   79 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~   79 (334)
                      |+|+|+|+ |++|+++++.|.+.| ++|++++|++++...+.. .++.++.+|+.+.+.+.++++++|+|||+++..   
T Consensus         6 ~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~---   80 (118)
T 3ic5_A            6 WNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNR-MGVATKQVDAKDEAGLAKALGGFDAVISAAPFF---   80 (118)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHT-TTCEEEECCTTCHHHHHHHTTTCSEEEECSCGG---
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHh-CCCcEEEecCCCHHHHHHHHcCCCEEEECCCch---
Confidence            47999999 999999999999999 999999998765433222 367889999999999999999999999998631   


Q ss_pred             CCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           80 LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        80 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                                   ....+++++.+. +++++...+
T Consensus        81 -------------~~~~~~~~~~~~-g~~~~~~~~  101 (118)
T 3ic5_A           81 -------------LTPIIAKAAKAA-GAHYFDLTE  101 (118)
T ss_dssp             -------------GHHHHHHHHHHT-TCEEECCCS
T ss_pred             -------------hhHHHHHHHHHh-CCCEEEecC
Confidence                         136888899887 565555443

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.28  E-value=2.7e-12  Score=121.74  Aligned_cols=213  Identities=16%  Similarity=0.088  Sum_probs=137.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCC---------CCCC----CCCCCCeEEEEcCCCChhhHHHH------
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS---------DISG----LPSEGALELVYGDVTDYRSLVDA------   62 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~---------~~~~----~~~~~~v~~~~~Dl~d~~~~~~~------   62 (334)
                      ++|||||++.||.++++.|+++|++|++.+|+..         ..+.    +... +.+. .+|+.|.++..++      
T Consensus        10 valVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~-g~~~-~~d~~d~~~~~~~v~~~~~   87 (604)
T 2et6_A           10 VVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN-GGVA-VADYNNVLDGDKIVETAVK   87 (604)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHT-TCEE-EEECCCTTCHHHHHHHHHH
T ss_pred             EEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhc-CCeE-EEEcCCHHHHHHHHHHHHH
Confidence            4899999999999999999999999999987641         1110    1000 1122 2466666443333      


Q ss_pred             -hcCCCEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC---CCcEEEEecccceeccCCCccCCCCCc
Q 019878           63 -CFGCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQV  132 (334)
Q Consensus        63 -~~~~d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~~~~~~e~~~  132 (334)
                       +..+|++||+||....      ..++++..+++|+.|+..+.+++..+.   +-.++|++||.........        
T Consensus        88 ~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~--------  159 (604)
T 2et6_A           88 NFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFG--------  159 (604)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT--------
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCC--------
Confidence             2359999999997432      223456789999999999998886541   2359999999765432221        


Q ss_pred             cccccccChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceee
Q 019878          133 HEEKYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSF  208 (334)
Q Consensus       133 ~~~~~~~~~Y~~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (334)
                            ...|+.+|.....+.+.+    .++|+++..+.|+ +.       ..+..        ....      ......
T Consensus       160 ------~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~-------T~m~~--------~~~~------~~~~~~  211 (604)
T 2et6_A          160 ------QANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-AR-------SRMTE--------SIMP------PPMLEK  211 (604)
T ss_dssp             ------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CC-------CHHHH--------TTSC------HHHHTT
T ss_pred             ------chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-Cc-------Ccccc--------ccCC------hhhhcc
Confidence                  256999999777666554    4569999999996 21       11110        0000      001123


Q ss_pred             eeHHHHHHHHHHHhhcC--CCCCeEEecC-------------------CCCCHHHHHHHHHHHhC
Q 019878          209 CHVDDVVDGHIAAMEKG--RSGERYLLTG-------------------ENASFMQIFDMAAVITG  252 (334)
Q Consensus       209 i~v~D~a~a~~~~~~~~--~~g~~~~i~g-------------------~~~s~~e~~~~i~~~~g  252 (334)
                      ...+|++.++..++...  ..|+++.+.|                   +..+..++.+...++..
T Consensus       212 ~~pe~vA~~v~~L~s~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  276 (604)
T 2et6_A          212 LGPEKVAPLVLYLSSAENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILD  276 (604)
T ss_dssp             CSHHHHHHHHHHHTSSSCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTC
T ss_pred             CCHHHHHHHHHHHhCCcccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhc
Confidence            47899999999988654  2577776632                   23577888877776654

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.22  E-value=6.2e-11  Score=127.92  Aligned_cols=245  Identities=11%  Similarity=0.032  Sum_probs=123.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCe-EEEEEcCCCCCCC-------CC-CCCCeEEEEcCCCChhhHHHHhc------CC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHS-VRALVRRTSDISG-------LP-SEGALELVYGDVTDYRSLVDACF------GC   66 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~-------~~-~~~~v~~~~~Dl~d~~~~~~~~~------~~   66 (334)
                      ++|||||+|.||.++++.|+++|++ |++++|+..+...       +. ...++.++.+|++|.+++.++++      .+
T Consensus      1886 ~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~g~i 1965 (2512)
T 2vz8_A         1886 SYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQLGPV 1965 (2512)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHHSCE
T ss_pred             EEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence            5899999999999999999999987 7788888654310       10 11257889999999988877664      48


Q ss_pred             CEEEEeccccC------CCCCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           67 HVIFHTAALVE------PWLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        67 d~vih~a~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      |+|||+||...      ...+++...+++|+.|+.++.+++.... ...+||++||....-...+              .
T Consensus      1966 d~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g--------------~ 2031 (2512)
T 2vz8_A         1966 GGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAG--------------Q 2031 (2512)
T ss_dssp             EEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTT--------------C
T ss_pred             cEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCC--------------c
Confidence            99999999732      1335677889999999999988887641 2369999999765432221              2


Q ss_pred             ChHHHHHHHHHHHHHHHhhcCCCEEEEecCceecCCCC------------C----chhHHHHHHHHHHcCCCCcccc---
Q 019878          140 TQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKL------------T----TGNLVAKLMIERFNGRLPGYIG---  200 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~~~g~~~~ilR~~~v~G~~~~------------~----~~~~~~~~~~~~~~~~~~~~~~---  200 (334)
                      ..|+.+|...+.+.+.....|++...+-.+.+-+.|--            +    ........+...+....+.+..   
T Consensus      2032 ~~Y~aaKaal~~l~~~rr~~Gl~~~a~~~g~~~~~G~~~~~~~~~~~~~~g~~~~~~~~~l~~l~~~~~~~~p~~~~~~~ 2111 (2512)
T 2vz8_A         2032 ANYGFANSAMERICEKRRHDGLPGLAVQWGAIGDVGVVLETMGTNDTVIGGTLPQRIASCLEVLDLFLSQPHPVLSSFVL 2111 (2512)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSCCCEEEECCBCTTSTTTC----CCCCTTSEECBCHHHHHHHHHHHHTCSCSEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCcEEEEEccCcCCcchhhhcchhHHHHhhcccCccHHHHHHHHHHHhhCCCcccchhhh
Confidence            56999999999999987778999998888766443210            0    0001122333333332221110   


Q ss_pred             -CCC--CceeeeeHHHHHHHHHHHhhcCC------CCCeEEecCCCCCHHHHHHHHHHHhCCCCCcccc
Q 019878          201 -YGN--DRFSFCHVDDVVDGHIAAMEKGR------SGERYLLTGENASFMQIFDMAAVITGTSRPRFCI  260 (334)
Q Consensus       201 -~~~--~~~~~i~v~D~a~a~~~~~~~~~------~g~~~~i~g~~~s~~e~~~~i~~~~g~~~~~~~~  260 (334)
                       ...  ...+-...+.+++.+..++..+.      ....+.++++++.-.|+...+.+.+|...+...+
T Consensus      2112 ~~~~~~~~~~~~~~~~l~~~~a~vL~~~~~~~i~~~~~~~~lG~DSL~avelr~~i~~~~~~~l~~~~i 2180 (2512)
T 2vz8_A         2112 AEKKAAAPRDGSSQKDLVKAVAHILGIRDVASINPDSTLVDLGLDSLMGVEVRQILEREHDLVLSMREV 2180 (2512)
T ss_dssp             CC-------------------------------------------------------------------
T ss_pred             cccccccccccchHHHHHHHHHHHhCCCcccccCCCCchHHhCcchHHHHHHHHHHHHHhCCcccHHHH
Confidence             000  00000011234444444444221      2346777788888888888888888876655433

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=99.17  E-value=3.5e-12  Score=112.13  Aligned_cols=167  Identities=13%  Similarity=0.067  Sum_probs=107.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC-------eEEEEEcC----CCCCC----CCCCCCCeEEEEcCCCChhhHHHHhcC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH-------SVRALVRR----TSDIS----GLPSEGALELVYGDVTDYRSLVDACFG   65 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~-------~V~~~~r~----~~~~~----~~~~~~~v~~~~~Dl~d~~~~~~~~~~   65 (334)
                      |||+||||+||+|++++..|+.+|.       +|+++++.    .++..    .+... ...+ ..|+...+.+.+++++
T Consensus         6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~-~~~~-~~~i~~~~~~~~al~~   83 (329)
T 1b8p_A            6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDC-AFPL-LAGMTAHADPMTAFKD   83 (329)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTT-TCTT-EEEEEEESSHHHHTTT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhh-cccc-cCcEEEecCcHHHhCC
Confidence            6899999999999999999998875       79998887    22110    01100 0111 1355555667888999


Q ss_pred             CCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCccccccccChHHH
Q 019878           66 CHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (334)
Q Consensus        66 ~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (334)
                      +|+|||+||...........++..|+..++++++++.++. .-.+||++|...-.- ..- ........++   ...++.
T Consensus        84 aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~-t~~-~~~~~~~~p~---~~v~g~  158 (329)
T 1b8p_A           84 ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTN-AYI-AMKSAPSLPA---KNFTAM  158 (329)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHH-HHH-HHHTCTTSCG---GGEEEC
T ss_pred             CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHH-HHH-HHHHcCCCCH---HHEEEe
Confidence            9999999997554334456688999999999999999983 344899998632100 000 0000000111   123555


Q ss_pred             HHHHHHHHHHHHhh-cCCCEEEEecCceecC
Q 019878          145 SKAVADKIALQAAS-EGLPIVPVYPGVIYGP  174 (334)
Q Consensus       145 sK~~~E~~~~~~~~-~g~~~~ilR~~~v~G~  174 (334)
                      ++....++...+.+ .|++...++...|+|.
T Consensus       159 t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~  189 (329)
T 1b8p_A          159 LRLDHNRALSQIAAKTGKPVSSIEKLFVWGN  189 (329)
T ss_dssp             CHHHHHHHHHHHHHHHTCCGGGEESCEEEBC
T ss_pred             ecHHHHHHHHHHHHHhCcCHHHceEEEEEec
Confidence            66655555555544 4777777777778884

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=99.15  E-value=4.8e-11  Score=104.64  Aligned_cols=112  Identities=15%  Similarity=0.131  Sum_probs=81.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCC--CCCCC-CCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDIS--GLPSE-GALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~--~~~~~-~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      |||+||||+||+|+.++..|+++|  ++|+++++++....  .+... ....+ .+ +.+.+++.++++++|+|||+|+.
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v-~~-~~~t~d~~~al~gaDvVi~~ag~   86 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVV-RG-FLGQQQLEAALTGMDLIIVPAGV   86 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEE-EE-EESHHHHHHHHTTCSEEEECCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceE-EE-EeCCCCHHHHcCCCCEEEEcCCc
Confidence            789999999999999999999988  88999987654100  01100 01111 11 23355678889999999999997


Q ss_pred             cCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecc
Q 019878           76 VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (334)
Q Consensus        76 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss  115 (334)
                      ..........+...|+.+++++++.+.++ +.+.+|+++|
T Consensus        87 ~~~~g~~r~dl~~~N~~~~~~i~~~i~~~-~p~~~viv~S  125 (326)
T 1smk_A           87 PRKPGMTRDDLFKINAGIVKTLCEGIAKC-CPRAIVNLIS  125 (326)
T ss_dssp             CCCSSCCCSHHHHHHHHHHHHHHHHHHHH-CTTSEEEECC
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEEC
Confidence            54433344567899999999999999998 4666666665

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=99.05  E-value=3.4e-10  Score=98.73  Aligned_cols=109  Identities=14%  Similarity=0.128  Sum_probs=76.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC--eEEEEEc--CCCCCC-------CC-CCC-CCeEEEEcCCCChhhHHHHhcCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVR--RTSDIS-------GL-PSE-GALELVYGDVTDYRSLVDACFGCH   67 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~-------~~-~~~-~~v~~~~~Dl~d~~~~~~~~~~~d   67 (334)
                      |||+||||+||+|++++..|+.+|.  ++.++++  +.++..       .. ... ..+++...    .+++.++++++|
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~----~d~l~~al~gaD   76 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVE----SDENLRIIDESD   76 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEE----ETTCGGGGTTCS
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeC----CcchHHHhCCCC
Confidence            8999999999999999999998874  6788887  432110       00 000 01222211    123566789999


Q ss_pred             EEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecc
Q 019878           68 VIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (334)
Q Consensus        68 ~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss  115 (334)
                      +|||+||...........++..|+.+++++++++.++ + +.+|+++|
T Consensus        77 ~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~-~~~vlv~S  122 (313)
T 1hye_A           77 VVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEI-C-DTKIFVIT  122 (313)
T ss_dssp             EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-C-CCEEEECS
T ss_pred             EEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEEec
Confidence            9999999754433444567899999999999999999 5 66666665

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=99.05  E-value=5e-11  Score=103.48  Aligned_cols=107  Identities=17%  Similarity=0.144  Sum_probs=75.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC--eEEEEEc--CCCCCCC----CC----CCCCeEEEEcCCCChhhHHHHhcCCCE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVR--RTSDISG----LP----SEGALELVYGDVTDYRSLVDACFGCHV   68 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~----~~----~~~~v~~~~~Dl~d~~~~~~~~~~~d~   68 (334)
                      |||+||||+|++|++++..|+.+|.  ++.++++  .+++...    +.    ...++++.. +  +    .++++++|+
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDv   73 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G----YEDTAGSDV   73 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C----GGGGTTCSE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C----HHHhCCCCE
Confidence            8999999999999999999998874  6777887  4321100    00    001222222 1  1    456789999


Q ss_pred             EEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecc
Q 019878           69 IFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (334)
Q Consensus        69 vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss  115 (334)
                      |||+|+...........++..|+.+++++++++.++ +...+|+++|
T Consensus        74 Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~p~~~viv~S  119 (303)
T 1o6z_A           74 VVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISLTTS  119 (303)
T ss_dssp             EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEEEECC
T ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEeC
Confidence            999999754433344567899999999999999998 5666666665

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=98.96  E-value=5.2e-09  Score=113.30  Aligned_cols=219  Identities=15%  Similarity=0.195  Sum_probs=136.3

Q ss_pred             cEEEEcCCCh-hhHHHHHHHHhCCCeEEEEEcCCCC-----CCC----CCC-CCCeEEEEcCCCChhhHHHHh----c--
Q 019878            2 KILVSGASGY-LGGRLCHALLKQGHSVRALVRRTSD-----ISG----LPS-EGALELVYGDVTDYRSLVDAC----F--   64 (334)
Q Consensus         2 ~ilItG~tG~-iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~----~~~-~~~v~~~~~Dl~d~~~~~~~~----~--   64 (334)
                      ++|||||++. ||.++++.|++.|++|++++|+.+.     ...    +.. ...+..+.+|++|.+++.+++    +  
T Consensus      2138 vaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i~~~~ 2217 (3089)
T 3zen_D         2138 VAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWVGTEQ 2217 (3089)
T ss_dssp             EEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHTSCC
T ss_pred             EEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHHHhhh
Confidence            5899999999 9999999999999999999998654     111    111 125778999999999887764    2  


Q ss_pred             -----CCCEEEEeccc----cC---C----CCCCcccc----hhhhhHHHHHHHHHHHhcC---CCc---EEEEecccce
Q 019878           65 -----GCHVIFHTAAL----VE---P----WLPDPSRF----FAVNVEGLKNVVQAAKETK---TVE---KIIYTSSFFA  118 (334)
Q Consensus        65 -----~~d~vih~a~~----~~---~----~~~~~~~~----~~~n~~~~~~l~~~~~~~~---~~~---~~v~~Ss~~v  118 (334)
                           .+|++||+||.    ..   .    ...++...    +++|+.++..++..+....   +..   .+|..+|. .
T Consensus      2218 ~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ss-~ 2296 (3089)
T 3zen_D         2218 TESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPGSP-N 2296 (3089)
T ss_dssp             EEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEECS-S
T ss_pred             hhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEECCc-c
Confidence                 37999999996    11   1    11233333    7889999988888776531   111   22222221 1


Q ss_pred             eccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHhhc-----CCCEEEEecCceecCCCCCchhHHHHHHHHHHcC
Q 019878          119 LGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE-----GLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNG  193 (334)
Q Consensus       119 ~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~  193 (334)
                      .+....              ...|+.||.+.+.+.+.+..+     ++++..+.||++-+.+........    ......
T Consensus      2297 ~g~~g~--------------~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~~~~----~~~~~~ 2358 (3089)
T 3zen_D         2297 RGMFGG--------------DGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQNDAI----VSAVEE 2358 (3089)
T ss_dssp             TTSCSS--------------CSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTTTTTT----HHHHGG
T ss_pred             cccCCC--------------chHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccccchhH----HHHHHh
Confidence            111110              146999999988888876533     577888999998754321111111    111111


Q ss_pred             CCCccccCCCCceeeeeHHHHHHHHHHHhhcCC----CCCeE--EecC---C-CCCHHHHHHHHHH
Q 019878          194 RLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR----SGERY--LLTG---E-NASFMQIFDMAAV  249 (334)
Q Consensus       194 ~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~----~g~~~--~i~g---~-~~s~~e~~~~i~~  249 (334)
                      . +        .+ ....+|+|.+++.++....    .+...  .++|   . ...+.++.+.+++
T Consensus      2359 ~-~--------~r-~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~~~~~~~~~ 2414 (3089)
T 3zen_D         2359 A-G--------VT-TYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMAELAAKARE 2414 (3089)
T ss_dssp             G-S--------CB-CEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHHHHTHHHHH
T ss_pred             c-C--------CC-CCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHHHHHHHHHH
Confidence            1 0        11 2278999999999876421    23332  3333   2 3688888876543

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.86  E-value=9.2e-09  Score=78.85  Aligned_cols=101  Identities=18%  Similarity=0.231  Sum_probs=74.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHH-hcCCCEEEEeccccCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTAALVEPWL   80 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vih~a~~~~~~~   80 (334)
                      +|+|+|+ |.+|+.+++.|.+.|++|+++++++++...+... ...++.+|..+.+.+.++ +.++|+||++++.     
T Consensus         8 ~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~-~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~-----   80 (144)
T 2hmt_A            8 QFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASY-ATHAVIANATEENELLSLGIRNFEYVIVAIGA-----   80 (144)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTT-CSEEEECCTTCHHHHHTTTGGGCSEEEECCCS-----
T ss_pred             cEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh-CCEEEEeCCCCHHHHHhcCCCCCCEEEECCCC-----
Confidence            5999997 9999999999999999999999986554433332 457788999998887776 6789999999862     


Q ss_pred             CCcccchhhhhHHHHHHHHHHHhcCCCcEEEEeccccee
Q 019878           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL  119 (334)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~  119 (334)
                       +    .+.|.    .+++.+++. +.+++|..++...+
T Consensus        81 -~----~~~~~----~~~~~~~~~-~~~~ii~~~~~~~~  109 (144)
T 2hmt_A           81 -N----IQAST----LTTLLLKEL-DIPNIWVKAQNYYH  109 (144)
T ss_dssp             -C----HHHHH----HHHHHHHHT-TCSEEEEECCSHHH
T ss_pred             -c----hHHHH----HHHHHHHHc-CCCeEEEEeCCHHH
Confidence             1    12232    456667776 56677776654433

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.80  E-value=5.9e-09  Score=93.09  Aligned_cols=92  Identities=17%  Similarity=0.217  Sum_probs=74.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~   80 (334)
                      |||+|.|+ |++|+.+++.|.+ .++|.+.+++..+.+.+..  .+..+..|..|.+++.++++++|+||++++..    
T Consensus        17 mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~--~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~----   88 (365)
T 3abi_A           17 MKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKE--FATPLKVDASNFDKLVEVMKEFELVIGALPGF----   88 (365)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTT--TSEEEECCTTCHHHHHHHHTTCSEEEECCCGG----
T ss_pred             cEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhc--cCCcEEEecCCHHHHHHHHhCCCEEEEecCCc----
Confidence            89999998 9999999999976 4899999998765544433  57788999999999999999999999998631    


Q ss_pred             CCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                            +      -..++++|.+++  +++|=+|
T Consensus        89 ------~------~~~v~~~~~~~g--~~yvD~s  108 (365)
T 3abi_A           89 ------L------GFKSIKAAIKSK--VDMVDVS  108 (365)
T ss_dssp             ------G------HHHHHHHHHHHT--CEEEECC
T ss_pred             ------c------cchHHHHHHhcC--cceEeee
Confidence                  1      147889999983  3777766

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.79  E-value=7.9e-09  Score=78.85  Aligned_cols=97  Identities=23%  Similarity=0.250  Sum_probs=70.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHH-hcCCCEEEEeccccCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTAALVEPW   79 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vih~a~~~~~~   79 (334)
                      |+|+|+|+ |++|+.+++.|.+.|++|++++|+++....+....++.++.+|..+.+.+.+. +.++|+||++.+.    
T Consensus         5 m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~----   79 (140)
T 1lss_A            5 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGK----   79 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSC----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCC----
Confidence            78999985 99999999999999999999999765433222111567788999988877655 6789999999642    


Q ss_pred             CCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           80 LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        80 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                         .    ..|    ..+.+.++.. +.+++|..+
T Consensus        80 ---~----~~~----~~~~~~~~~~-~~~~ii~~~  102 (140)
T 1lss_A           80 ---E----EVN----LMSSLLAKSY-GINKTIARI  102 (140)
T ss_dssp             ---H----HHH----HHHHHHHHHT-TCCCEEEEC
T ss_pred             ---c----hHH----HHHHHHHHHc-CCCEEEEEe
Confidence               1    223    2455566665 456776544

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.75  E-value=1.5e-08  Score=77.60  Aligned_cols=95  Identities=20%  Similarity=0.175  Sum_probs=70.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHH-hcCCCEEEEeccccCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTAALVEPWL   80 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vih~a~~~~~~~   80 (334)
                      +|+|+|+ |.+|+++++.|.++|++|++++++++....+.. .++.++.+|.++++.+.++ +.++|+||.+.+.     
T Consensus         8 ~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~-~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~-----   80 (141)
T 3llv_A            8 EYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED-EGFDAVIADPTDESFYRSLDLEGVSAVLITGSD-----   80 (141)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-TTCEEEECCTTCHHHHHHSCCTTCSEEEECCSC-----
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH-CCCcEEECCCCCHHHHHhCCcccCCEEEEecCC-----
Confidence            6999996 999999999999999999999998765433322 2678899999999988876 4579999987651     


Q ss_pred             CCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                            ...|    ..++..+++.+ ..++|...
T Consensus        81 ------~~~n----~~~~~~a~~~~-~~~iia~~  103 (141)
T 3llv_A           81 ------DEFN----LKILKALRSVS-DVYAIVRV  103 (141)
T ss_dssp             ------HHHH----HHHHHHHHHHC-CCCEEEEE
T ss_pred             ------HHHH----HHHHHHHHHhC-CceEEEEE
Confidence                  1233    34555666664 55555444

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.74  E-value=1.1e-08  Score=89.20  Aligned_cols=111  Identities=19%  Similarity=0.137  Sum_probs=80.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCC--CCCCC---CCeEEEEcCCCChhhHHHHhcCCCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDIS--GLPSE---GALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~--~~~~~---~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a   73 (334)
                      |||.|+||+|++|+.++..|+.+|  .+|.++++++....  .+...   .+++.+.    ..+++.++++++|+||++|
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~----~t~d~~~a~~~aDvVvi~a   76 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYL----GPEQLPDCLKGCDVVVIPA   76 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEE----SGGGHHHHHTTCSEEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEec----CCCCHHHHhCCCCEEEECC
Confidence            899999999999999999999888  78999999762110  01110   0122111    1235677899999999999


Q ss_pred             cccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecc
Q 019878           74 ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (334)
Q Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss  115 (334)
                      |............+..|+..++.+++.+.++..-.++|++|-
T Consensus        77 g~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sN  118 (314)
T 1mld_A           77 GVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISN  118 (314)
T ss_dssp             SCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence            975443344456789999999999999999854458888763

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.74  E-value=1.8e-09  Score=93.16  Aligned_cols=75  Identities=21%  Similarity=0.272  Sum_probs=61.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC----CCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS----EGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      +++|||||+|++|+++++.|++.|++|++++|+.++...+..    ..++.++.+|++|.+++.++++++|+|||+|+.
T Consensus       120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~ag~  198 (287)
T 1lu9_A          120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAGAI  198 (287)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECCCT
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEECCCc
Confidence            369999999999999999999999999999998654322110    013567889999999999999999999999975

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.73  E-value=1.4e-07  Score=73.43  Aligned_cols=100  Identities=21%  Similarity=0.200  Sum_probs=73.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHH-hcCCCEEEEeccccCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTAALVEPW   79 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vih~a~~~~~~   79 (334)
                      |+|+|+| +|.+|+.+++.|.+.|++|++++|++.+...+....++..+.+|..+.+.+.++ +.++|+||.+.+.    
T Consensus        20 ~~v~IiG-~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~----   94 (155)
T 2g1u_A           20 KYIVIFG-CGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTND----   94 (155)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSC----
T ss_pred             CcEEEEC-CCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCC----
Confidence            5799999 599999999999999999999999887665554122567888999888777765 6789999988752    


Q ss_pred             CCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEeccc
Q 019878           80 LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF  116 (334)
Q Consensus        80 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~  116 (334)
                         .    ..    ...+++.++...+..++|...+.
T Consensus        95 ---~----~~----~~~~~~~~~~~~~~~~iv~~~~~  120 (155)
T 2g1u_A           95 ---D----ST----NFFISMNARYMFNVENVIARVYD  120 (155)
T ss_dssp             ---H----HH----HHHHHHHHHHTSCCSEEEEECSS
T ss_pred             ---c----HH----HHHHHHHHHHHCCCCeEEEEECC
Confidence               0    11    23455566663355677666543

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.63  E-value=1.5e-07  Score=77.24  Aligned_cols=73  Identities=25%  Similarity=0.392  Sum_probs=54.3

Q ss_pred             CcEEEEcC----------------CChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhH----H
Q 019878            1 MKILVSGA----------------SGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSL----V   60 (334)
Q Consensus         1 m~ilItG~----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~----~   60 (334)
                      |+||||||                +|.+|.+++++|+++|++|++++|+.......  ..++..+  |+.+.+++    .
T Consensus         4 k~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~~--~~~~~~~--~v~s~~em~~~v~   79 (232)
T 2gk4_A            4 MKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPEP--HPNLSIR--EITNTKDLLIEMQ   79 (232)
T ss_dssp             CEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCCC--CTTEEEE--ECCSHHHHHHHHH
T ss_pred             CEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccccC--CCCeEEE--EHhHHHHHHHHHH
Confidence            68999999                99999999999999999999999976422111  1256655  44455443    3


Q ss_pred             HHhcCCCEEEEeccccC
Q 019878           61 DACFGCHVIFHTAALVE   77 (334)
Q Consensus        61 ~~~~~~d~vih~a~~~~   77 (334)
                      +.+.++|++||+||...
T Consensus        80 ~~~~~~Dili~aAAvsD   96 (232)
T 2gk4_A           80 ERVQDYQVLIHSMAVSD   96 (232)
T ss_dssp             HHGGGCSEEEECSBCCS
T ss_pred             HhcCCCCEEEEcCcccc
Confidence            44457999999999743

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.61  E-value=3.9e-08  Score=89.89  Aligned_cols=104  Identities=16%  Similarity=0.165  Sum_probs=74.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC-CCeEEEEcCCCChhhHHHHhcCCCEEEEeccccC-CC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-GALELVYGDVTDYRSLVDACFGCHVIFHTAALVE-PW   79 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~-~~   79 (334)
                      +|+|+| +|++|+++++.|++.|++|++++|+.++...+... +++..+.+|+.|.+++.++++++|+|||+++... ..
T Consensus         5 ~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~~~~~   83 (450)
T 1ff9_A            5 SVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTFHAT   83 (450)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--CHHH
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccccchH
Confidence            699998 89999999999999999999999986544333221 2478889999999999999999999999998521 10


Q ss_pred             C-----CCcccchh--hhhHHHHHHHHHHHhcCCC
Q 019878           80 L-----PDPSRFFA--VNVEGLKNVVQAAKETKTV  107 (334)
Q Consensus        80 ~-----~~~~~~~~--~n~~~~~~l~~~~~~~~~~  107 (334)
                      .     ..-..++.  .....+.+++++|++. ++
T Consensus        84 i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~a-Gv  117 (450)
T 1ff9_A           84 VIKSAIRQKKHVVTTSYVSPAMMELDQAAKDA-GI  117 (450)
T ss_dssp             HHHHHHHHTCEEEESSCCCHHHHHTHHHHHHT-TC
T ss_pred             HHHHHHhCCCeEEEeecccHHHHHHHHHHHHC-CC
Confidence            0     00011111  1134678899999987 54

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.60  E-value=8.8e-09  Score=90.12  Aligned_cols=111  Identities=17%  Similarity=0.097  Sum_probs=78.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC--e-----EEEEEcCCC--CCC----CCCC--CCCeEEEEcCCCChhhHHHHhcC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH--S-----VRALVRRTS--DIS----GLPS--EGALELVYGDVTDYRSLVDACFG   65 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~--~-----V~~~~r~~~--~~~----~~~~--~~~v~~~~~Dl~d~~~~~~~~~~   65 (334)
                      |||+||||+|+||++++..|...|.  +     ++++++.+.  ...    ++..  .+...    ++...+...+.+++
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~----~~~~~~~~~~~~~d   79 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLK----DVIATDKEEIAFKD   79 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEE----EEEEESCHHHHTTT
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccC----CEEEcCCcHHHhCC
Confidence            6899999999999999999998764  4     888888642  100    0000  00111    22222345677899


Q ss_pred             CCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCc-EEEEecc
Q 019878           66 CHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVE-KIIYTSS  115 (334)
Q Consensus        66 ~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~Ss  115 (334)
                      +|+|||+||............++.|+..++.+++++.++..-. +++.+|.
T Consensus        80 aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN  130 (333)
T 5mdh_A           80 LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN  130 (333)
T ss_dssp             CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            9999999997544445566789999999999999999984322 6887774

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.57  E-value=3.1e-08  Score=89.53  Aligned_cols=95  Identities=20%  Similarity=0.261  Sum_probs=72.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC---CeEEEEEcCCCCCCCCCC------CCCeEEEEcCCCChhhHHHHhcC--CCEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG---HSVRALVRRTSDISGLPS------EGALELVYGDVTDYRSLVDACFG--CHVI   69 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~------~~~v~~~~~Dl~d~~~~~~~~~~--~d~v   69 (334)
                      |||+|+|+ |++|+.+++.|++.|   .+|.+.+|+.++...+..      ..++..+.+|++|.+++.+++++  +|+|
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvV   80 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIV   80 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEE
Confidence            47999998 999999999999988   389999998654332111      02578899999999999999987  9999


Q ss_pred             EEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        70 ih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      ||+++...                ...++++|.+. ++ +++-++
T Consensus        81 in~ag~~~----------------~~~v~~a~l~~-g~-~vvD~a  107 (405)
T 4ina_A           81 LNIALPYQ----------------DLTIMEACLRT-GV-PYLDTA  107 (405)
T ss_dssp             EECSCGGG----------------HHHHHHHHHHH-TC-CEEESS
T ss_pred             EECCCccc----------------ChHHHHHHHHh-CC-CEEEec
Confidence            99997311                14677888887 43 455443

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.53  E-value=7.4e-07  Score=78.36  Aligned_cols=75  Identities=13%  Similarity=-0.040  Sum_probs=60.3

Q ss_pred             cEEEEcCCChhhHHHHHHHH-hCCCeEEEEEcCCCCCCCCCC-----------------CCCeEEEEcCCCChhhHHHHh
Q 019878            2 KILVSGASGYLGGRLCHALL-KQGHSVRALVRRTSDISGLPS-----------------EGALELVYGDVTDYRSLVDAC   63 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~-----------------~~~v~~~~~Dl~d~~~~~~~~   63 (334)
                      ++|||||+..+|.+.+..|+ ..|.+++++.+..+..+....                 -.....+.+|+.|.+...+++
T Consensus        52 ~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~vi  131 (401)
T 4ggo_A           52 NVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKAQVI  131 (401)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHH
T ss_pred             EEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHHHHH
Confidence            69999999999999999998 578999999987765433211                 035788999999998887776


Q ss_pred             c-------CCCEEEEecccc
Q 019878           64 F-------GCHVIFHTAALV   76 (334)
Q Consensus        64 ~-------~~d~vih~a~~~   76 (334)
                      +       ++|++||.+|..
T Consensus       132 ~~i~~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          132 EEAKKKGIKFDLIVYSLASP  151 (401)
T ss_dssp             HHHHHTTCCEEEEEECCCCS
T ss_pred             HHHHHhcCCCCEEEEecccc
Confidence            4       489999999963

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.52  E-value=9.8e-08  Score=78.75  Aligned_cols=98  Identities=16%  Similarity=0.159  Sum_probs=72.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHH-hcCCCEEEEeccccCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTAALVEPW   79 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vih~a~~~~~~   79 (334)
                      |+|+|+|+ |.+|+++++.|.++|++|++++++++....+....++.++.+|.++.+.+.++ ++++|+||-+.+.    
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~----   75 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPR----   75 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSC----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCC----
Confidence            99999995 99999999999999999999999876544332212578999999999998887 6789999966541    


Q ss_pred             CCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           80 LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        80 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                         .    ..|    ..++..+++..+..++|...
T Consensus        76 ---d----~~n----~~~~~~a~~~~~~~~iia~~   99 (218)
T 3l4b_C           76 ---D----EVN----LFIAQLVMKDFGVKRVVSLV   99 (218)
T ss_dssp             ---H----HHH----HHHHHHHHHTSCCCEEEECC
T ss_pred             ---c----HHH----HHHHHHHHHHcCCCeEEEEE
Confidence               1    123    23455555533566766443

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.45  E-value=1e-07  Score=76.34  Aligned_cols=72  Identities=17%  Similarity=0.188  Sum_probs=59.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC-CCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHH--hcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA--CFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~--~~~~d~vih~a~   74 (334)
                      |+|+|+| .|.+|..+++.|.+. |++|+++++++++...+.. .++..+.+|.++.+.+.++  ++++|+||.+.+
T Consensus        40 ~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~-~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~  114 (183)
T 3c85_A           40 AQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS-EGRNVISGDATDPDFWERILDTGHVKLVLLAMP  114 (183)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH-TTCCEEECCTTCHHHHHTBCSCCCCCEEEECCS
T ss_pred             CcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH-CCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCC
Confidence            5799998 699999999999999 9999999998765433322 2577888999998888877  778999998764

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.43  E-value=3.2e-06  Score=65.40  Aligned_cols=72  Identities=22%  Similarity=0.314  Sum_probs=57.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCC-CCCCCCCC--CCCeEEEEcCCCChhhHHHH-hcCCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT-SDISGLPS--EGALELVYGDVTDYRSLVDA-CFGCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~-~~~~d~vih~a~   74 (334)
                      +|+|+|+ |.+|+.+++.|.+.|++|+++++++ +....+..  ..++.++.+|.++.+.+.++ ++++|+||-+.+
T Consensus         5 ~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (153)
T 1id1_A            5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSD   80 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred             cEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecC
Confidence            5999995 9999999999999999999999974 21111110  12689999999999998887 788999997764

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.39  E-value=8.7e-08  Score=87.79  Aligned_cols=73  Identities=18%  Similarity=0.251  Sum_probs=60.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhC-CCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      +|+|+|+ |++|+++++.|++. |++|++++|+.++...+....++..+.+|+.|.+++.+++.++|+|||+++.
T Consensus        25 ~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~   98 (467)
T 2axq_A           25 NVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPY   98 (467)
T ss_dssp             EEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCG
T ss_pred             EEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCch
Confidence            6999997 99999999999998 7899999998655433221124677889999999999999999999999985

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.37  E-value=1.2e-06  Score=71.68  Aligned_cols=70  Identities=20%  Similarity=0.276  Sum_probs=53.3

Q ss_pred             CcEEEEcC----------------CChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHH--
Q 019878            1 MKILVSGA----------------SGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA--   62 (334)
Q Consensus         1 m~ilItG~----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~--   62 (334)
                      ++||||||                +|.+|.++++.|.++|++|++++++.. .. .+  .++.  ..|+.+.+++.+.  
T Consensus         9 k~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~-~~--~g~~--~~dv~~~~~~~~~v~   82 (226)
T 1u7z_A            9 LNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP-TP--PFVK--RVDVMTALEMEAAVN   82 (226)
T ss_dssp             CEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC-CC--TTEE--EEECCSHHHHHHHHH
T ss_pred             CEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc-cC--CCCe--EEccCcHHHHHHHHH
Confidence            46999999                699999999999999999999988652 11 11  2444  3577887665443  


Q ss_pred             --hcCCCEEEEecccc
Q 019878           63 --CFGCHVIFHTAALV   76 (334)
Q Consensus        63 --~~~~d~vih~a~~~   76 (334)
                        +.++|++||+||..
T Consensus        83 ~~~~~~Dili~~Aav~   98 (226)
T 1u7z_A           83 ASVQQQNIFIGCAAVA   98 (226)
T ss_dssp             HHGGGCSEEEECCBCC
T ss_pred             HhcCCCCEEEECCccc
Confidence              35699999999974

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.27  E-value=1.5e-06  Score=66.29  Aligned_cols=71  Identities=17%  Similarity=0.201  Sum_probs=58.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHH-hcCCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vih~a~   74 (334)
                      +|+|.| .|.+|+.+++.|.+.|++|++++++++..+.+.. .++.++.+|.++.+.+.++ ++++|+||-+.+
T Consensus         9 ~viIiG-~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~-~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (140)
T 3fwz_A            9 HALLVG-YGRVGSLLGEKLLASDIPLVVIETSRTRVDELRE-RGVRAVLGNAANEEIMQLAHLECAKWLILTIP   80 (140)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-TTCEEEESCTTSHHHHHHTTGGGCSEEEECCS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-cCCCEEECCCCCHHHHHhcCcccCCEEEEECC
Confidence            699999 5999999999999999999999999875443332 2688999999999988775 567999997764

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.19  E-value=4.1e-07  Score=79.73  Aligned_cols=111  Identities=12%  Similarity=0.045  Sum_probs=73.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCCC----CCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG----LPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~----~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |||.|+|++|++|+.++..|+.+|  .+|+++++..++...    +..   ..+...++.-.....++++++|+||.+||
T Consensus         9 ~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~---~~~~~~~i~~t~d~~~al~dADvVvitaG   85 (343)
T 3fi9_A            9 EKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRH---CGFEGLNLTFTSDIKEALTDAKYIVSSGG   85 (343)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHH---HCCTTCCCEEESCHHHHHTTEEEEEECCC
T ss_pred             CEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhh---CcCCCCceEEcCCHHHHhCCCCEEEEccC
Confidence            589999999999999999999988  589999986542110    000   00000111112345677899999999999


Q ss_pred             ccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCc-EEEEec
Q 019878           75 LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVE-KIIYTS  114 (334)
Q Consensus        75 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~S  114 (334)
                      ............+..|+...+.+++.+.++..-. .++.+|
T Consensus        86 ~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvs  126 (343)
T 3fi9_A           86 APRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIF  126 (343)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECS
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEec
Confidence            7443333445678899999999999999984333 356666

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=98.04  E-value=6e-07  Score=76.33  Aligned_cols=72  Identities=24%  Similarity=0.249  Sum_probs=42.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHh-CCCeEEEE-EcCCCCC--CCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLK-QGHSVRAL-VRRTSDI--SGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~-~g~~V~~~-~r~~~~~--~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |||+|+|++|.+|+.+++.+.+ .|++++++ ++++...  ..+....++.  ..++...+++.++++++|+||+++.
T Consensus         6 mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~--~~~v~~~~dl~~~l~~~DvVIDft~   81 (273)
T 1dih_A            6 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAG--KTGVTVQSSLDAVKDDFDVFIDFTR   81 (273)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSS--CCSCCEESCSTTTTTSCSEEEECSC
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCC--cCCceecCCHHHHhcCCCEEEEcCC
Confidence            6899999999999999999875 57888755 4443221  1111100000  0111111223345567999998875

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=98.03  E-value=6e-06  Score=68.70  Aligned_cols=70  Identities=14%  Similarity=0.061  Sum_probs=58.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHH-hcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vih~a~   74 (334)
                      |+|+|.|+ |.+|+.+++.|.+.|+ |++++++++....+.  .++.++.+|.+|.+.+.++ ++++|.||-+.+
T Consensus        10 ~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~--~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (234)
T 2aef_A           10 RHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR--SGANFVHGDPTRVSDLEKANVRGARAVIVDLE   80 (234)
T ss_dssp             CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH--TTCEEEESCTTCHHHHHHTTCTTCSEEEECCS
T ss_pred             CEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh--cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCC
Confidence            47999996 9999999999999999 999998876543333  2689999999999998877 788999997754

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.97  E-value=7.3e-06  Score=71.36  Aligned_cols=107  Identities=17%  Similarity=0.258  Sum_probs=75.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC--eEEEEEcCCCCCCC----C----CCC-CCeEEEEcCCCChhhHHHHhcCCCEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISG----L----PSE-GALELVYGDVTDYRSLVDACFGCHVI   69 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~----~~~-~~v~~~~~Dl~d~~~~~~~~~~~d~v   69 (334)
                      |||.|+|+ |.+|+.++..|+..|.  +|+++++++++...    +    +.. .+++....|       .+.++++|+|
T Consensus         6 ~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~-------~~a~~~aDvV   77 (326)
T 3pqe_A            6 NKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT-------YEDCKDADIV   77 (326)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC-------GGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc-------HHHhCCCCEE
Confidence            58999995 9999999999999886  89999986543211    0    000 134443333       2467899999


Q ss_pred             EEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecc
Q 019878           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (334)
Q Consensus        70 ih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss  115 (334)
                      |.+||............+..|+...+.+++.+.++..-..++.+|.
T Consensus        78 vi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtN  123 (326)
T 3pqe_A           78 CICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATN  123 (326)
T ss_dssp             EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             EEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC
Confidence            9999974433334456788999999999999999844446776663

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.94  E-value=2.7e-07  Score=75.72  Aligned_cols=72  Identities=24%  Similarity=0.290  Sum_probs=50.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEE-cCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVY-GDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~-~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |||+|+||+|++|+.+++.|++.|++|++++|++++...+...-+. ++. .|+. .+++.++++++|+||++..
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~D~Vi~~~~   73 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR-IAGDASIT-GMKNEDAAEACDIAVLTIP   73 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH-HHSSCCEE-EEEHHHHHHHCSEEEECSC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-ccccCCCC-hhhHHHHHhcCCEEEEeCC
Confidence            8999999999999999999999999999999986543221110000 000 1222 2345666778999999875

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.93  E-value=5.5e-06  Score=71.69  Aligned_cols=110  Identities=25%  Similarity=0.171  Sum_probs=76.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC-C--CeEEEEEcCCCCCC----CCCCC-CCeEEEEcCCCChhhHHHHhcCCCEEEEe
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ-G--HSVRALVRRTSDIS----GLPSE-GALELVYGDVTDYRSLVDACFGCHVIFHT   72 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~-g--~~V~~~~r~~~~~~----~~~~~-~~v~~~~~Dl~d~~~~~~~~~~~d~vih~   72 (334)
                      |||.|+||+|.+|+.++..|..+ +  .+++++++.+ ...    ++... ...+.... ..  +...+.++++|+||-+
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~-~~--~~~~~~~~~aDivii~   76 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGF-SG--EDATPALEGADVVLIS   76 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEE-CS--SCCHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEe-cC--CCcHHHhCCCCEEEEe
Confidence            89999999999999999999875 4  5889998876 211    01100 01222110 00  1135678899999999


Q ss_pred             ccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           73 AALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        73 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      ||............++.|....+.+.+.+.++..-..++.+|
T Consensus        77 ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvt  118 (312)
T 3hhp_A           77 AGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (312)
T ss_dssp             CSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEec
Confidence            997544334556788999999999999999884444677666

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.92  E-value=1.8e-05  Score=71.35  Aligned_cols=72  Identities=24%  Similarity=0.368  Sum_probs=60.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHH-hcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vih~a~   74 (334)
                      |+|+|.| .|-+|+.+++.|.+.|++|++++++++....+.. .++.++.||.++.+.+.++ ++++|+||-+.+
T Consensus         5 ~~viIiG-~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~-~g~~vi~GDat~~~~L~~agi~~A~~viv~~~   77 (413)
T 3l9w_A            5 MRVIIAG-FGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK-FGMKVFYGDATRMDLLESAGAAKAEVLINAID   77 (413)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH-TTCCCEESCTTCHHHHHHTTTTTCSEEEECCS
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh-CCCeEEEcCCCCHHHHHhcCCCccCEEEECCC
Confidence            6799999 5999999999999999999999999875443322 2678899999999999887 678999987754

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.92  E-value=2.8e-05  Score=67.54  Aligned_cols=106  Identities=13%  Similarity=0.149  Sum_probs=65.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC--eEEEEEcCCCCCC-------CC-CCCCCeEEEEcCCCChhhHHHHhcCCCEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDIS-------GL-PSEGALELVYGDVTDYRSLVDACFGCHVIF   70 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~-------~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   70 (334)
                      |||.|+|+ |.+|+.++..|+..|.  +++++++++++..       +. .-...++....|       .+.++++|+||
T Consensus        10 ~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~-------~~a~~~aDiVv   81 (326)
T 3vku_A           10 QKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE-------YSDAKDADLVV   81 (326)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC-------GGGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc-------HHHhcCCCEEE
Confidence            68999995 9999999999998875  8999998654221       10 000134444332       34678999999


Q ss_pred             EeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        71 h~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      .+||............++.|+.-.+.+.+.+.++..-..++.+|
T Consensus        82 i~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt  125 (326)
T 3vku_A           82 ITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             ECCCCC----------------CHHHHHHHHHTTTCCSEEEECS
T ss_pred             ECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence            99997543333455678899999999999999885444666666

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=97.87  E-value=3.5e-06  Score=68.12  Aligned_cols=96  Identities=16%  Similarity=0.150  Sum_probs=61.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhh---HHHHhc--CCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRS---LVDACF--GCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~---~~~~~~--~~d~vih~a~~   75 (334)
                      ++|||+||+|.||..+++.+...|.+|++++|++++.+.+... +... ..|..+.+.   +.+...  ++|+||+++|.
T Consensus        40 ~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~-g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~  117 (198)
T 1pqw_A           40 ERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRL-GVEY-VGDSRSVDFADEILELTDGYGVDVVLNSLAG  117 (198)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTT-CCSE-EEETTCSTHHHHHHHHTTTCCEEEEEECCCT
T ss_pred             CEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc-CCCE-EeeCCcHHHHHHHHHHhCCCCCeEEEECCch
Confidence            3699999999999999999999999999999876543222111 2222 236655433   333332  49999999872


Q ss_pred             cCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccc
Q 019878           76 VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF  117 (334)
Q Consensus        76 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~  117 (334)
                               .       .....++.++..   .++|.+++..
T Consensus       118 ---------~-------~~~~~~~~l~~~---G~~v~~g~~~  140 (198)
T 1pqw_A          118 ---------E-------AIQRGVQILAPG---GRFIELGKKD  140 (198)
T ss_dssp             ---------H-------HHHHHHHTEEEE---EEEEECSCGG
T ss_pred             ---------H-------HHHHHHHHhccC---CEEEEEcCCC
Confidence                     0       123444444433   3899888754

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.86  E-value=5.5e-06  Score=71.07  Aligned_cols=105  Identities=20%  Similarity=0.171  Sum_probs=76.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC--eEEEEEcCCCCCC-----------CCCCCCCeEEEEcCCCChhhHHHHhcCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDIS-----------GLPSEGALELVYGDVTDYRSLVDACFGCH   67 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~-----------~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d   67 (334)
                      |||.|+|+ |.+|..++..|+..|+  +|.+++++++..+           .+..  ..+....  .|    .++++++|
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~--~~~i~~t--~d----~~a~~~aD   71 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDK--YPKIVGG--AD----YSLLKGSE   71 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTC--CCEEEEE--SC----GGGGTTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCC--CCEEEEe--CC----HHHhCCCC
Confidence            99999998 9999999999999887  8999999775421           0111  1222211  12    45778999


Q ss_pred             EEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           68 VIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        68 ~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      +||.+||............+..|..-.+.+.+.+.++..-..++.+|
T Consensus        72 iVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs  118 (294)
T 1oju_A           72 IIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (294)
T ss_dssp             EEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             EEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            99999997543333445678899999999999999985445677776

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.83  E-value=1.3e-05  Score=69.36  Aligned_cols=107  Identities=21%  Similarity=0.164  Sum_probs=73.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC--eEEEEEcCCCCCCC----CCC-----CCCeEEEEcCCCChhhHHHHhcCCCEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISG----LPS-----EGALELVYGDVTDYRSLVDACFGCHVI   69 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~-----~~~v~~~~~Dl~d~~~~~~~~~~~d~v   69 (334)
                      |||.|+|+ |.+|+.++..|+..|.  +|+++++++++...    +..     ....+....|  +    .+.++++|+|
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~----~~a~~~aDvV   73 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--D----YGPTEDSDVC   73 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--S----SGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--C----HHHhCCCCEE
Confidence            99999995 9999999999998875  89999998764220    000     0012222111  1    3467889999


Q ss_pred             EEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        70 ih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      |.+||............+..|+.-.+.+.+.+.++..-..++.+|
T Consensus        74 ii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  118 (314)
T 3nep_X           74 IITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVA  118 (314)
T ss_dssp             EECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECC
T ss_pred             EECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecC
Confidence            999997543334455788999999999999999885445677666

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=97.74  E-value=2.2e-05  Score=68.10  Aligned_cols=106  Identities=17%  Similarity=0.128  Sum_probs=67.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCC----CCC-----CCCeEEEEcCCCChhhHHHHhcCCCEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISG----LPS-----EGALELVYGDVTDYRSLVDACFGCHVIF   70 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~----~~~-----~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   70 (334)
                      |||.|+|+ |.+|..++..|+..|+ +|.++++++++...    +..     ....+....  .|   . +.++++|+||
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d---~-~a~~~aD~Vi   75 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NN---Y-ADTANSDVIV   75 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SC---G-GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC--CC---H-HHHCCCCEEE
Confidence            48999998 9999999999999996 88888887643211    000     001111110  12   2 4578999999


Q ss_pred             EeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        71 h~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      .+++...............|+...+.+.+.+.++. ...+|.+.
T Consensus        76 ~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~  118 (309)
T 1ur5_A           76 VTSGAPRKPGMSREDLIKVNADITRACISQAAPLS-PNAVIIMV  118 (309)
T ss_dssp             ECCCC--------CHHHHHHHHHHHHHHHHHGGGC-TTCEEEEC
T ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEc
Confidence            99986433222234567889999999999999883 34344333

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.73  E-value=5.6e-06  Score=75.87  Aligned_cols=71  Identities=21%  Similarity=0.395  Sum_probs=59.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHH-hcCCCEEEEe
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHT   72 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vih~   72 (334)
                      |||+|.| .|-+|++|++.|.+.|++|++++++++....+.+.-++..+.||.++++.+.++ ++++|.+|-+
T Consensus         4 M~iiI~G-~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~   75 (461)
T 4g65_A            4 MKIIILG-AGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAV   75 (461)
T ss_dssp             EEEEEEC-CSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEEC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEE
Confidence            8999999 699999999999999999999999877654433222688999999999999887 4679998844

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.73  E-value=5.3e-06  Score=73.93  Aligned_cols=73  Identities=12%  Similarity=0.116  Sum_probs=55.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      ++|+|+|+ |.+|..+++.|...|++|++++|++++...+.+..+.. +.+|..+.+.+.+.+.++|+||++++.
T Consensus       167 ~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~-~~~~~~~~~~l~~~~~~~DvVi~~~g~  239 (369)
T 2eez_A          167 ASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGR-VITLTATEANIKKSVQHADLLIGAVLV  239 (369)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTS-EEEEECCHHHHHHHHHHCSEEEECCC-
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCce-EEEecCCHHHHHHHHhCCCEEEECCCC
Confidence            57999998 99999999999999999999999865432111100111 345667788888888899999999985

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.73  E-value=0.00017  Score=63.03  Aligned_cols=106  Identities=17%  Similarity=0.129  Sum_probs=72.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCC-----------CCCCCCeEEEEcCCCChhhHHHHhcCCCE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISG-----------LPSEGALELVYGDVTDYRSLVDACFGCHV   68 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~-----------~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~   68 (334)
                      |||.|+|+ |.+|..++..|+..|+ +|.+++++++..+.           +....+++.       ..++.++++++|+
T Consensus        10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-------t~d~~ea~~~aDi   81 (331)
T 1pzg_A           10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-------EYSYEAALTGADC   81 (331)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-------ECSHHHHHTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-------eCCHHHHhCCCCE
Confidence            68999997 9999999999999998 99999998753321           000011221       1234557889999


Q ss_pred             EEEeccccCCCCC-----CcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           69 IFHTAALVEPWLP-----DPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        69 vih~a~~~~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      ||-+++.......     ........|+...+.+++.+.++..-..++.+|
T Consensus        82 Vi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  132 (331)
T 1pzg_A           82 VIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  132 (331)
T ss_dssp             EEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence            9999976432212     234567788899999999999884323455444

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=97.71  E-value=0.00018  Score=62.56  Aligned_cols=106  Identities=20%  Similarity=0.170  Sum_probs=69.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC--eEEEEEcCCCCCCC----CCC----CCCeEEEEcCCCChhhHHHHhcCCCEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISG----LPS----EGALELVYGDVTDYRSLVDACFGCHVIF   70 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~----~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   70 (334)
                      |||.|+|+ |.+|..++..|+..|.  +|.+++.++++...    +..    ...+++..   .+    .++++++|+||
T Consensus         8 ~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~---~~----~~a~~~aDvVi   79 (318)
T 1y6j_A            8 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA---GD----YSDVKDCDVIV   79 (318)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C----GGGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE---CC----HHHhCCCCEEE
Confidence            58999997 9999999999999886  89999998754331    000    01232221   12    34588999999


Q ss_pred             EeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        71 h~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      .+++...............|+...+.+++.+.++..-..++.+|
T Consensus        80 i~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (318)
T 1y6j_A           80 VTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  123 (318)
T ss_dssp             ECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             EcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEec
Confidence            99986432222334567899999999999999874334555544

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.71  E-value=1.4e-05  Score=68.41  Aligned_cols=106  Identities=20%  Similarity=0.193  Sum_probs=76.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCC-----------CCCCCCCeEEEEcCCCChhhHHHHhcCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDIS-----------GLPSEGALELVYGDVTDYRSLVDACFGCH   67 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~-----------~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d   67 (334)
                      |||.|+| +|.||+.++-.|..++  .++..++..++...           .+..  ..+....+  |+    +.++++|
T Consensus         1 MKV~IiG-aG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~--~~~i~~~~--d~----~~~~~aD   71 (294)
T 2x0j_A            1 MKLGFVG-AGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDK--YPKIVGGA--DY----SLLKGSE   71 (294)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTC--CCEEEEES--CG----GGGTTCS
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCC--CCeEecCC--CH----HHhCCCC
Confidence            9999999 5999999999998776  57899888653211           0111  12222221  22    3578899


Q ss_pred             EEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecc
Q 019878           68 VIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (334)
Q Consensus        68 ~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss  115 (334)
                      +||-.||............++.|..-.+.+.+.+.++..-..++.+|-
T Consensus        72 vVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsN  119 (294)
T 2x0j_A           72 IIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             EEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             EEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecC
Confidence            999999986655556677899999999999999999854446666663

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.67  E-value=1.3e-05  Score=69.76  Aligned_cols=107  Identities=19%  Similarity=0.196  Sum_probs=74.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCC----CCCC-----CCeEEE-EcCCCChhhHHHHhcCCCEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISG----LPSE-----GALELV-YGDVTDYRSLVDACFGCHVI   69 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~----~~~~-----~~v~~~-~~Dl~d~~~~~~~~~~~d~v   69 (334)
                      |||.|+|+ |.+|..++..|+..|+ +|+++++++++...    +...     ...+.. ..|      . ++++++|+|
T Consensus         8 ~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d------~-~a~~~aDiV   79 (324)
T 3gvi_A            8 NKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGAND------Y-AAIEGADVV   79 (324)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESS------G-GGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCC------H-HHHCCCCEE
Confidence            58999997 9999999999999988 99999998764310    0000     011211 112      2 577899999


Q ss_pred             EEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecc
Q 019878           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (334)
Q Consensus        70 ih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss  115 (334)
                      |.+||............+..|+...+.+++.+.++..-..++.+|.
T Consensus        80 Iiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN  125 (324)
T 3gvi_A           80 IVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITN  125 (324)
T ss_dssp             EECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             EEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence            9999874433234456778899999999999999854446777663

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.63  E-value=2.5e-05  Score=68.05  Aligned_cols=108  Identities=18%  Similarity=0.179  Sum_probs=76.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC--eEEEEEcCCCCCCC----CCC----CCCeEEEEcCCCChhhHHHHhcCCCEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISG----LPS----EGALELVYGDVTDYRSLVDACFGCHVIF   70 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~----~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   70 (334)
                      |||.|+|+ |.+|+.++..|+.+|.  ++++++++.++...    +..    ......+..+  |+    +.++++|+||
T Consensus        20 ~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~--d~----~~~~~aDiVv   92 (331)
T 4aj2_A           20 NKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSK--DY----SVTANSKLVI   92 (331)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECS--SG----GGGTTEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcC--CH----HHhCCCCEEE
Confidence            68999996 9999999999999886  89999986532110    000    0011222221  22    2578999999


Q ss_pred             EeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecc
Q 019878           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (334)
Q Consensus        71 h~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss  115 (334)
                      .+||............++.|..-.+.+.+.+.++..-..++.+|.
T Consensus        93 i~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtN  137 (331)
T 4aj2_A           93 ITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSN  137 (331)
T ss_dssp             ECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             EccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            999975544445667899999999999999999844457777763

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.60  E-value=3.9e-05  Score=66.47  Aligned_cols=106  Identities=16%  Similarity=0.163  Sum_probs=73.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCC--CCCCC----CCCC-----CCeEEEEcCCCChhhHHHHhcCCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRT--SDISG----LPSE-----GALELVYGDVTDYRSLVDACFGCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~--~~~~~----~~~~-----~~v~~~~~Dl~d~~~~~~~~~~~d~v   69 (334)
                      ||.|+|+ |.+|+.++..|+..|+ +|+++++++  .....    +...     ........  .|    .+.++++|+|
T Consensus        10 kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t--~d----~~a~~~aDvV   82 (315)
T 3tl2_A           10 KVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT--SD----YADTADSDVV   82 (315)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE--SC----GGGGTTCSEE
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc--CC----HHHhCCCCEE
Confidence            7999995 9999999999999998 999999983  21110    0000     01111111  12    2467889999


Q ss_pred             EEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        70 ih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      |-+||............+..|+...+.+.+.+.++..-..++.+|
T Consensus        83 Iiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvs  127 (315)
T 3tl2_A           83 VITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLT  127 (315)
T ss_dssp             EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECC
Confidence            999997544334455678899999999999999884444677766

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.59  E-value=9e-05  Score=64.40  Aligned_cols=107  Identities=18%  Similarity=0.164  Sum_probs=75.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCC----CCCCC-----CCeEEEEcCCCChhhHHHHhcCCCEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDIS----GLPSE-----GALELVYGDVTDYRSLVDACFGCHVIF   70 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~----~~~~~-----~~v~~~~~Dl~d~~~~~~~~~~~d~vi   70 (334)
                      |||.|+| +|.+|+.++..|+..|. +|+++++++++..    .+...     ...+....  .|    .++++++|+||
T Consensus         6 ~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d----~~a~~~aDvVI   78 (321)
T 3p7m_A            6 KKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--ND----YKDLENSDVVI   78 (321)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SC----GGGGTTCSEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CC----HHHHCCCCEEE
Confidence            5899999 59999999999999887 9999999876431    01100     01222211  12    25788999999


Q ss_pred             EeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        71 h~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      .+||............+..|+...+.+++.+.++..-..++.+|
T Consensus        79 i~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  122 (321)
T 3p7m_A           79 VTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT  122 (321)
T ss_dssp             ECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            99987543333445567889999999999999985444677666

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=97.57  E-value=0.00039  Score=60.03  Aligned_cols=106  Identities=17%  Similarity=0.200  Sum_probs=67.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC--eEEEEEcCCCCCC--------CCCCCCCeEEEEcCCCChhhHHHHhcCCCEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDIS--------GLPSEGALELVYGDVTDYRSLVDACFGCHVIF   70 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~--------~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   70 (334)
                      |||.|+|+ |.+|..++..|+..|+  +|.++++++++..        ........+...   .+    .+.++++|+||
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~----~~a~~~aDvVI   72 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GG----HSELADAQVVI   72 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---EC----GGGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CC----HHHhCCCCEEE
Confidence            89999997 9999999999999998  9999998754211        000001223322   12    24578999999


Q ss_pred             EeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        71 h~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      .+++............+..|+...+.+++.+.++..-..++.+|
T Consensus        73 i~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~t  116 (304)
T 2v6b_A           73 LTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTS  116 (304)
T ss_dssp             ECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECS
T ss_pred             EcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            99975332222334567889999999999998873333555555

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.57  E-value=3.2e-05  Score=67.67  Aligned_cols=109  Identities=15%  Similarity=0.091  Sum_probs=74.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-------eEEEEEcCCCCC---------CCCCCCCCeEEEEcCCCChhhHHHHhcC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-------SVRALVRRTSDI---------SGLPSEGALELVYGDVTDYRSLVDACFG   65 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~---------~~~~~~~~v~~~~~Dl~d~~~~~~~~~~   65 (334)
                      ||.|+||+|.||+.|+-.|.....       ++..++..+...         .+.........+..+     ...+++++
T Consensus        26 KVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~-----~~~~a~~~  100 (345)
T 4h7p_A           26 KVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTA-----DPRVAFDG  100 (345)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEES-----CHHHHTTT
T ss_pred             EEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcC-----ChHHHhCC
Confidence            799999999999999999887532       688888754210         000100012222221     23567899


Q ss_pred             CCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecc
Q 019878           66 CHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSS  115 (334)
Q Consensus        66 ~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss  115 (334)
                      +|+||-+||..........+.++.|..-.+.+.+.+.++. .-.+++.+|.
T Consensus       101 advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsN  151 (345)
T 4h7p_A          101 VAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGN  151 (345)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             CCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCC
Confidence            9999999998655445567789999999999999998862 2235666663

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=97.57  E-value=3.1e-05  Score=68.35  Aligned_cols=71  Identities=23%  Similarity=0.201  Sum_probs=50.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHh----c-CCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC----F-GCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~----~-~~d~vih~a~   74 (334)
                      +|||+|++|.+|..+++.+...|.+|++++|++++.+.+.+. +...+ .|+.+.+++.+.+    . ++|+||+++|
T Consensus       172 ~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~-g~~~~-~d~~~~~~~~~~~~~~~~~~~D~vi~~~g  247 (347)
T 2hcy_A          172 WVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSI-GGEVF-IDFTKEKDIVGAVLKATDGGAHGVINVSV  247 (347)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHT-TCCEE-EETTTCSCHHHHHHHHHTSCEEEEEECSS
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHc-CCceE-EecCccHhHHHHHHHHhCCCCCEEEECCC
Confidence            599999999999999999999999999999987654322211 22222 3666433333332    2 5899999987

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=97.55  E-value=6.8e-05  Score=65.90  Aligned_cols=91  Identities=25%  Similarity=0.239  Sum_probs=57.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC-----C-eEEEEEcCCCCCCCCC----CC---CCeEEEEcCCCChhhHHHHhcCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG-----H-SVRALVRRTSDISGLP----SE---GALELVYGDVTDYRSLVDACFGCH   67 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g-----~-~V~~~~r~~~~~~~~~----~~---~~v~~~~~Dl~d~~~~~~~~~~~d   67 (334)
                      |||+|.||||++|+.|++.|.+++     + +++.+.++......+.    ..   ..+.+.  |+ +.    +.+.++|
T Consensus        10 ~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~--~~-~~----~~~~~~D   82 (352)
T 2nqt_A           10 TKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVE--PT-EA----AVLGGHD   82 (352)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCE--EC-CH----HHHTTCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeec--cC-CH----HHhcCCC
Confidence            479999999999999999999876     3 6777754332111111    00   011211  21 22    2355899


Q ss_pred             EEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccc
Q 019878           68 VIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF  117 (334)
Q Consensus        68 ~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~  117 (334)
                      +||.+.+...                +..++..+ +. + .++|-+|+..
T Consensus        83 vVf~alg~~~----------------s~~~~~~~-~~-G-~~vIDlSa~~  113 (352)
T 2nqt_A           83 AVFLALPHGH----------------SAVLAQQL-SP-E-TLIIDCGADF  113 (352)
T ss_dssp             EEEECCTTSC----------------CHHHHHHS-CT-T-SEEEECSSTT
T ss_pred             EEEECCCCcc----------------hHHHHHHH-hC-C-CEEEEECCCc
Confidence            9999887421                24666666 54 4 4899999865

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=97.52  E-value=0.00014  Score=66.42  Aligned_cols=108  Identities=19%  Similarity=0.214  Sum_probs=64.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC------CCeE-EE-----EcCCCChhhHHHHhcCCCE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE------GALE-LV-----YGDVTDYRSLVDACFGCHV   68 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~v~-~~-----~~Dl~d~~~~~~~~~~~d~   68 (334)
                      |||.|.| +|++|..++..|++.|++|++++|++++.+.+...      ++.. .+     .+.+.-..++.++++++|+
T Consensus         3 mkI~VIG-~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDv   81 (450)
T 3gg2_A            3 LDIAVVG-IGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADI   81 (450)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSE
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCE
Confidence            6899998 79999999999999999999999986543221110      0000 00     0111112335567788999


Q ss_pred             EEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcE-EEEecc
Q 019878           69 IFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEK-IIYTSS  115 (334)
Q Consensus        69 vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~v~~Ss  115 (334)
                      ||-+.+....      ..-..++.....+++...+.-.-.. +|..||
T Consensus        82 ViiaVptp~~------~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~ST  123 (450)
T 3gg2_A           82 IFIAVGTPAG------EDGSADMSYVLDAARSIGRAMSRYILIVTKST  123 (450)
T ss_dssp             EEECCCCCBC------TTSSBCCHHHHHHHHHHHHHCCSCEEEEECSC
T ss_pred             EEEEcCCCcc------cCCCcChHHHHHHHHHHHhhCCCCCEEEEeee
Confidence            9988763211      1113455556666666655422223 444453

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.49  E-value=3.8e-05  Score=66.77  Aligned_cols=106  Identities=14%  Similarity=0.182  Sum_probs=70.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC--eEEEEEcCCCCCCC----CC----CCCCeEEEEcCCCChhhHHHHhcCCCEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISG----LP----SEGALELVYGDVTDYRSLVDACFGCHVIF   70 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~----~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   70 (334)
                      |||.|+|+ |.+|..++..|+..+.  ++.++++++++...    +.    ....+++.. |  +    .++++++|+||
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDvVi   77 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--E----YSDCKDADLVV   77 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--C----GGGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCCEEE
Confidence            58999998 9999999999998764  89999986532210    00    001333332 2  2    44588999999


Q ss_pred             EeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        71 h~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      ..++............+..|+...+.+.+.+.++..-..++.+|
T Consensus        78 i~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  121 (318)
T 1ez4_A           78 ITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (318)
T ss_dssp             ECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence            99987433223334677899999999999999985445677665

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=97.49  E-value=8.2e-05  Score=64.53  Aligned_cols=107  Identities=21%  Similarity=0.167  Sum_probs=71.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC--CCeEEEEEcCCCCCCCC----CCC-----CCeEEEEcCCCChhhHHHHhcCCCEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ--GHSVRALVRRTSDISGL----PSE-----GALELVYGDVTDYRSLVDACFGCHVI   69 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~----~~~-----~~v~~~~~Dl~d~~~~~~~~~~~d~v   69 (334)
                      |||.|+|+ |.+|..++..|+..  |++|.++++++++.+.+    ...     ........  .|.   .. ++++|+|
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d~---~~-l~~aDvV   73 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDY---AD-TANSDIV   73 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCG---GG-GTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC--CCH---HH-HCCCCEE
Confidence            89999997 99999999999985  79999999987543211    000     01111110  122   23 6889999


Q ss_pred             EEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        70 ih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      |-+++............+..|+.....+++.+.++..-..++.+|
T Consensus        74 iiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~t  118 (310)
T 1guz_A           74 IITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (310)
T ss_dssp             EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             EEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEc
Confidence            999975322112233566788999999999998874344666664

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=97.47  E-value=2.8e-05  Score=68.20  Aligned_cols=71  Identities=21%  Similarity=0.227  Sum_probs=49.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHh-----cCCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC-----FGCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~-----~~~d~vih~a~   74 (334)
                      +||||||+|.||..+++.+...|.+|+++++++++.+.+... +.. ...|..+.+++.+.+     .++|+||+++|
T Consensus       148 ~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~-g~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g  223 (333)
T 1v3u_A          148 TVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQI-GFD-AAFNYKTVNSLEEALKKASPDGYDCYFDNVG  223 (333)
T ss_dssp             EEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-TCS-EEEETTSCSCHHHHHHHHCTTCEEEEEESSC
T ss_pred             EEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc-CCc-EEEecCCHHHHHHHHHHHhCCCCeEEEECCC
Confidence            599999999999999999999999999999876543222111 222 223666523333222     25899999998

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.46  E-value=9.7e-05  Score=64.88  Aligned_cols=70  Identities=13%  Similarity=0.059  Sum_probs=59.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHH-hcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vih~a~   74 (334)
                      ++|+|.|+ |.+|+.+++.|.++|+ |++++++++..+ +.. .++.++.||.+|++.+.++ ++++|.||-+.+
T Consensus       116 ~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~-~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~  186 (336)
T 1lnq_A          116 RHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLE  186 (336)
T ss_dssp             CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH-TTCEEEESCTTSHHHHHHTCSTTEEEEEECCS
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh-CCcEEEEeCCCCHHHHHhcChhhccEEEEcCC
Confidence            36999995 9999999999999999 999999887654 332 3789999999999999887 788999987653

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=97.42  E-value=5.7e-05  Score=65.44  Aligned_cols=106  Identities=14%  Similarity=0.120  Sum_probs=74.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCCC----CCC----CCCeEEEEcCCCChhhHHHHhcCCCEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG----LPS----EGALELVYGDVTDYRSLVDACFGCHVIF   70 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~----~~~----~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   70 (334)
                      |||.|+|+ |.+|..++..|+..+  .++.++++++++...    +..    ...+++.. |  +    .++++++|+||
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~----~~a~~~aD~Vi   72 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--S----YGDLEGARAVV   72 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGTTEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--C----HHHhCCCCEEE
Confidence            89999997 999999999999876  689999987532210    000    01333332 2  2    34588999999


Q ss_pred             EeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        71 h~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      ..++...............|+...+.+.+.+.++..-..++.+|
T Consensus        73 i~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  116 (310)
T 2xxj_A           73 LAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVAT  116 (310)
T ss_dssp             ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             ECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            99987443223334567889999999999999885445677665

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.42  E-value=0.00051  Score=59.60  Aligned_cols=104  Identities=14%  Similarity=0.051  Sum_probs=75.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC--eEEEEEcCCCCCC----------CCCCCCCeEEE-EcCCCChhhHHHHhcCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDIS----------GLPSEGALELV-YGDVTDYRSLVDACFGCH   67 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~----------~~~~~~~v~~~-~~Dl~d~~~~~~~~~~~d   67 (334)
                      |||.|+|+ |.+|+.++..|+..|.  +|+++++++++..          .+..  ..... ..|+.       .++++|
T Consensus        22 ~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~--~~~i~~t~d~~-------~~~daD   91 (330)
T 3ldh_A           22 NKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLH--TAKIVSGKDYS-------VSAGSK   91 (330)
T ss_dssp             CEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSC--CSEEEEESSSC-------SCSSCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhccc--CCeEEEcCCHH-------HhCCCC
Confidence            68999997 9999999999998885  8999998654211          0111  11222 22322       267899


Q ss_pred             EEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           68 VIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        68 ~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      +||-+||............+..|+.-.+.+.+.+.++..-..++.+|
T Consensus        92 iVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvt  138 (330)
T 3ldh_A           92 LVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHP  138 (330)
T ss_dssp             EEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCC
Confidence            99999998554445556788999999999999999985445677666

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.40  E-value=4.7e-05  Score=66.41  Aligned_cols=106  Identities=14%  Similarity=0.172  Sum_probs=72.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC--eEEEEEcCCCCCCC----CCC----CCCeEEEEcCCCChhhHHHHhcCCCEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISG----LPS----EGALELVYGDVTDYRSLVDACFGCHVIF   70 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~----~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   70 (334)
                      |||.|+|+ |.+|..++..|+..+.  ++.++++++++...    +..    ...+++.. |  +    .++++++|+||
T Consensus        10 ~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~----~~a~~~aDvVi   81 (326)
T 2zqz_A           10 QKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--E----YSDAKDADLVV   81 (326)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGGGCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCCEEE
Confidence            68999998 9999999999988764  89999986532210    000    01333332 2  2    44578999999


Q ss_pred             EeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        71 h~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      ..++...........++..|+...+.+.+.+.++..-..++.+|
T Consensus        82 i~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  125 (326)
T 2zqz_A           82 ITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             ECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence            99987433223334567889999999999999885445677665

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=97.40  E-value=5.8e-05  Score=68.77  Aligned_cols=73  Identities=22%  Similarity=0.332  Sum_probs=48.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEE-------------EcCCCChhhHHHHhcCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELV-------------YGDVTDYRSLVDACFGCH   67 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~-------------~~Dl~d~~~~~~~~~~~d   67 (334)
                      |||.|.| +|++|..++..|++.|++|++++|++++.+.+... ...+.             .+.+....++.++++++|
T Consensus         1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~-~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aD   78 (436)
T 1mv8_A            1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQG-KSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSD   78 (436)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT-CCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCS
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCC-CCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCC
Confidence            8999998 89999999999999999999999976543222110 00000             011111223455677899


Q ss_pred             EEEEeccc
Q 019878           68 VIFHTAAL   75 (334)
Q Consensus        68 ~vih~a~~   75 (334)
                      +||-+...
T Consensus        79 vviiaVpt   86 (436)
T 1mv8_A           79 VSFICVGT   86 (436)
T ss_dssp             EEEECCCC
T ss_pred             EEEEEcCC
Confidence            99988753

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.40  E-value=9.1e-05  Score=60.63  Aligned_cols=64  Identities=23%  Similarity=0.210  Sum_probs=48.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |+|.|+| +|.+|+.+++.|.+.|++|++.+|++++...+... +++..        ++.++++++|+||.+..
T Consensus        29 ~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~-g~~~~--------~~~~~~~~~DvVi~av~   92 (215)
T 2vns_A           29 PKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPS-AAQVT--------FQEEAVSSPEVIFVAVF   92 (215)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBT-TSEEE--------EHHHHTTSCSEEEECSC
T ss_pred             CEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCcee--------cHHHHHhCCCEEEECCC
Confidence            6899999 99999999999999999999999986543332221 33331        34566788999998765

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=97.38  E-value=0.00023  Score=61.90  Aligned_cols=105  Identities=17%  Similarity=0.180  Sum_probs=70.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCC----C-------CCCCCeEEEEcCCCChhhHHHHhcCCCE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISG----L-------PSEGALELVYGDVTDYRSLVDACFGCHV   68 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~----~-------~~~~~v~~~~~Dl~d~~~~~~~~~~~d~   68 (334)
                      |||.|+|+ |.+|..++..|+..|+ +|.++++++++...    +       ....+++.. .|      + ++++++|+
T Consensus         5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d------~-~al~~aD~   75 (322)
T 1t2d_A            5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS-NT------Y-DDLAGADV   75 (322)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE-CC------G-GGGTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC-CC------H-HHhCCCCE
Confidence            58999997 9999999999999997 89999987653221    0       000112211 12      3 56789999


Q ss_pred             EEEeccccCCCCCC-----cccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           69 IFHTAALVEPWLPD-----PSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        69 vih~a~~~~~~~~~-----~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      ||-+++........     .......|+...+.+++.+.+...-..++.+|
T Consensus        76 Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  126 (322)
T 1t2d_A           76 VIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  126 (322)
T ss_dssp             EEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             EEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            99999863321111     34556778888899999888874333566555

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=97.37  E-value=0.0001  Score=65.01  Aligned_cols=108  Identities=11%  Similarity=0.042  Sum_probs=72.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC-----eEEEEEcCCCCC-----------CCCC--CCCCeEEEEcCCCChhhHHHH
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH-----SVRALVRRTSDI-----------SGLP--SEGALELVYGDVTDYRSLVDA   62 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~-----~V~~~~r~~~~~-----------~~~~--~~~~v~~~~~Dl~d~~~~~~~   62 (334)
                      +||.|+||+|.||++++-.|+..+.     .+.+.+...+..           .+..  -..++..     .+  ...+.
T Consensus        33 ~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i-----~~--~~y~~  105 (375)
T 7mdh_A           33 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI-----GI--DPYEV  105 (375)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE-----ES--CHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEE-----ec--CCHHH
Confidence            4799999999999999999998752     266654433220           0100  0001221     11  23667


Q ss_pred             hcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhc-CCCcEEEEecc
Q 019878           63 CFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKET-KTVEKIIYTSS  115 (334)
Q Consensus        63 ~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~Ss  115 (334)
                      ++++|+||-+||............++.|..-.+.+.+.+.++ ..-..++.+|.
T Consensus       106 ~~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsN  159 (375)
T 7mdh_A          106 FEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGN  159 (375)
T ss_dssp             TTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             hCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence            899999999999755444455678899999999999999885 33457777774

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=97.32  E-value=9.6e-05  Score=64.23  Aligned_cols=106  Identities=16%  Similarity=0.255  Sum_probs=71.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCCC--------CCCC-CCeEEEEcCCCChhhHHHHhcCCCEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG--------LPSE-GALELVYGDVTDYRSLVDACFGCHVI   69 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~--------~~~~-~~v~~~~~Dl~d~~~~~~~~~~~d~v   69 (334)
                      |||.|+|+ |.+|+.++..|+..|  .+|++++++++....        .... ..+++.. |  +    .+.++++|+|
T Consensus         7 ~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~----~~al~~aDvV   78 (316)
T 1ldn_A            7 ARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--D----YDDCRDADLV   78 (316)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--C----GGGTTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--c----HHHhCCCCEE
Confidence            57999997 999999999998876  489999987542110        0000 0233332 1  2    3457899999


Q ss_pred             EEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        70 ih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      |-+++............+..|....+.+++.+.++..-..++.+|
T Consensus        79 iia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~t  123 (316)
T 1ldn_A           79 VICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (316)
T ss_dssp             EECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             EEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeC
Confidence            999987443223335667889999999999998874333555555

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.32  E-value=6.9e-05  Score=66.27  Aligned_cols=71  Identities=17%  Similarity=0.147  Sum_probs=49.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhh---HHHHhc--CCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRS---LVDACF--GCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~---~~~~~~--~~d~vih~a~   74 (334)
                      +|||+|++|.+|..+++.+...|.+|+++++++++.+..... +... ..|..+.+.   +.+...  ++|+||+++|
T Consensus       173 ~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~-ga~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~G  248 (351)
T 1yb5_A          173 SVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQN-GAHE-VFNHREVNYIDKIKKYVGEKGIDIIIEMLA  248 (351)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-TCSE-EEETTSTTHHHHHHHHHCTTCEEEEEESCH
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHc-CCCE-EEeCCCchHHHHHHHHcCCCCcEEEEECCC
Confidence            599999999999999999999999999999886543322111 1221 135555432   333333  5999999998

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.31  E-value=3.3e-05  Score=67.63  Aligned_cols=71  Identities=13%  Similarity=0.096  Sum_probs=49.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhh---HHHHhc--CCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRS---LVDACF--GCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~---~~~~~~--~~d~vih~a~   74 (334)
                      +|||+||+|.||..+++.+...|++|+++++++++.+.+... +... ..|..+.+.   +.+...  ++|+||+++|
T Consensus       143 ~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~-g~~~-~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g  218 (327)
T 1qor_A          143 QFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKA-GAWQ-VINYREEDLVERLKEITGGKKVRVVYDSVG  218 (327)
T ss_dssp             EEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH-TCSE-EEETTTSCHHHHHHHHTTTCCEEEEEECSC
T ss_pred             EEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc-CCCE-EEECCCccHHHHHHHHhCCCCceEEEECCc
Confidence            599999999999999999999999999999976543222111 1121 135555433   333332  4899999998

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=97.31  E-value=0.00037  Score=60.59  Aligned_cols=106  Identities=22%  Similarity=0.179  Sum_probs=71.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCC-----------CCCCeEEEEcCCCChhhHHHHhcCCCE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLP-----------SEGALELVYGDVTDYRSLVDACFGCHV   68 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-----------~~~~v~~~~~Dl~d~~~~~~~~~~~d~   68 (334)
                      |||.|.|+ |.+|+.++..|+..|+ +|++++++++......           ...++... .   |   + +.++++|+
T Consensus         5 ~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t-~---d---~-~a~~~aDi   75 (317)
T 2ewd_A            5 RKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT-D---D---Y-ADISGSDV   75 (317)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE-S---C---G-GGGTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC-C---C---H-HHhCCCCE
Confidence            57999996 9999999999999998 9999999875432110           00012111 1   2   2 46788999


Q ss_pred             EEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecc
Q 019878           69 IFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (334)
Q Consensus        69 vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss  115 (334)
                      ||-+++..........+....|....+.+++.+.++..-..++.+|.
T Consensus        76 Vi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sN  122 (317)
T 2ewd_A           76 VIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITN  122 (317)
T ss_dssp             EEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             EEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence            99999864332223344567788888888888887744345666664

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.30  E-value=4.3e-05  Score=67.04  Aligned_cols=71  Identities=13%  Similarity=0.121  Sum_probs=49.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChh---hHHHHhc--CCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYR---SLVDACF--GCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~---~~~~~~~--~~d~vih~a~   74 (334)
                      +|||+||+|.||..+++.+...|++|++++|++++.+.+.+. +... ..|..+.+   .+.+...  ++|+||+++|
T Consensus       148 ~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~-g~~~-~~d~~~~~~~~~i~~~~~~~~~d~vi~~~g  223 (333)
T 1wly_A          148 YVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKL-GCHH-TINYSTQDFAEVVREITGGKGVDVVYDSIG  223 (333)
T ss_dssp             EEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-TCSE-EEETTTSCHHHHHHHHHTTCCEEEEEECSC
T ss_pred             EEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCCE-EEECCCHHHHHHHHHHhCCCCCeEEEECCc
Confidence            599999999999999999999999999999986443222111 1121 13555433   2333332  5999999998

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.29  E-value=5.3e-05  Score=66.80  Aligned_cols=71  Identities=17%  Similarity=0.156  Sum_probs=48.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-CCCCeEEEEcCCCChh----hHHHHh-cCCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-SEGALELVYGDVTDYR----SLVDAC-FGCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~v~~~~~Dl~d~~----~~~~~~-~~~d~vih~a~   74 (334)
                      +|||+|++|.+|..+++.+...|.+|+++++++.+.+.+. .. +...+ .|..+.+    .+.+.. .++|+||+++|
T Consensus       158 ~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~-g~~~~-~d~~~~~~~~~~~~~~~~~~~d~vi~~~g  234 (345)
T 2j3h_A          158 TVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF-GFDDA-FNYKEESDLTAALKRCFPNGIDIYFENVG  234 (345)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS-CCSEE-EETTSCSCSHHHHHHHCTTCEEEEEESSC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-CCceE-EecCCHHHHHHHHHHHhCCCCcEEEECCC
Confidence            5999999999999999999999999999998865433222 11 22221 2555432    223222 25999999987

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.28  E-value=4.8e-05  Score=67.44  Aligned_cols=72  Identities=22%  Similarity=0.226  Sum_probs=48.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhh---HHHHhc-CCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRS---LVDACF-GCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~---~~~~~~-~~d~vih~a~   74 (334)
                      +|||+||+|.||..+++.+...|. +|+++++++++.+.+.+.-+... ..|..+.+.   +.+... ++|+||+++|
T Consensus       163 ~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~d~vi~~~G  239 (357)
T 2zb4_A          163 TMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDA-AINYKKDNVAEQLRESCPAGVDVYFDNVG  239 (357)
T ss_dssp             EEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSE-EEETTTSCHHHHHHHHCTTCEEEEEESCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCce-EEecCchHHHHHHHHhcCCCCCEEEECCC
Confidence            699999999999999999999999 99999987644322211002222 235555332   233222 5999999998

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.25  E-value=0.00087  Score=57.52  Aligned_cols=26  Identities=35%  Similarity=0.370  Sum_probs=24.1

Q ss_pred             ChhhHHHHHHHHhCCCeEEEEEcCCC
Q 019878           10 GYLGGRLCHALLKQGHSVRALVRRTS   35 (334)
Q Consensus        10 G~iG~~l~~~L~~~g~~V~~~~r~~~   35 (334)
                      |-.|.+++++++++|++|+.+.+...
T Consensus        65 GkmG~aiAe~~~~~Ga~V~lv~g~~s   90 (313)
T 1p9o_A           65 GRRGATSAEAFLAAGYGVLFLYRARS   90 (313)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred             cHHHHHHHHHHHHCCCEEEEEecCCC
Confidence            99999999999999999999998654

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=97.25  E-value=0.0002  Score=62.35  Aligned_cols=106  Identities=18%  Similarity=0.211  Sum_probs=70.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC--eEEEEEcCCCCCCCCCC--------CCCeEEEEcCCCChhhHHHHhcCCCEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGLPS--------EGALELVYGDVTDYRSLVDACFGCHVIF   70 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~--------~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   70 (334)
                      |||.|.|+ |.+|+.++..|+..|+  +|+++++++++...+..        ........   .|.    +.++++|+||
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~d~----~~~~~aDvVi   72 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA---GDY----ADLKGSDVVI   72 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE---CCG----GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe---CCH----HHhCCCCEEE
Confidence            89999997 9999999999999998  99999997643221100        00122221   232    3467899999


Q ss_pred             EeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        71 h~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      -+++...............|+.....+++.+.++..-..+|.+|
T Consensus        73 iav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~t  116 (319)
T 1a5z_A           73 VAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (319)
T ss_dssp             ECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            99876432111233456778888899999988863333566554

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.22  E-value=0.00012  Score=63.28  Aligned_cols=73  Identities=14%  Similarity=0.200  Sum_probs=53.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCC---CCCCCCCC----CCCeEEEEcCCCChhhHHHHhcCCCEEEEec
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRT---SDISGLPS----EGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~---~~~~~~~~----~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a   73 (334)
                      ++||+|+ |.+|++++..|.+.|. +|++++|+.   ++...+..    .........++.+.+.+.+.+.++|+|||+.
T Consensus       156 ~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiIINaT  234 (315)
T 3tnl_A          156 KMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNAT  234 (315)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEEECS
T ss_pred             EEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEEEECc
Confidence            6999996 8999999999999997 899999983   32221110    0123344456777777888889999999998


Q ss_pred             cc
Q 019878           74 AL   75 (334)
Q Consensus        74 ~~   75 (334)
                      +.
T Consensus       235 p~  236 (315)
T 3tnl_A          235 GV  236 (315)
T ss_dssp             ST
T ss_pred             cC
Confidence            65

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.21  E-value=0.00067  Score=57.54  Aligned_cols=67  Identities=16%  Similarity=0.174  Sum_probs=52.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      ++++|+|+ |..|+.++..|.+.|. +|++++|+.++...+..  .+...     ..+++.+.+.++|+||++-+.
T Consensus       118 k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~--~~~~~-----~~~~~~~~~~~aDiVInaTp~  185 (277)
T 3don_A          118 AYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL--NINKI-----NLSHAESHLDEFDIIINTTPA  185 (277)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS--CCEEE-----CHHHHHHTGGGCSEEEECCC-
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH--hcccc-----cHhhHHHHhcCCCEEEECccC
Confidence            36999995 8999999999999998 89999999887666554  23322     345566778889999999754

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=97.21  E-value=0.00058  Score=59.85  Aligned_cols=93  Identities=22%  Similarity=0.208  Sum_probs=54.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC---eEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH---SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVE   77 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~   77 (334)
                      |||+|.||||.+|+.+++.|.++++   +++.+.........+. ..+......|+ +++    .+.++|+||-+.+.. 
T Consensus         7 ~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~-~~g~~i~~~~~-~~~----~~~~~DvV~~a~g~~-   79 (340)
T 2hjs_A            7 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG-FAESSLRVGDV-DSF----DFSSVGLAFFAAAAE-   79 (340)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE-ETTEEEECEEG-GGC----CGGGCSEEEECSCHH-
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccc-cCCcceEEecC-CHH----HhcCCCEEEEcCCcH-
Confidence            5799999999999999999997654   4555542211111000 00111111122 121    246899999887631 


Q ss_pred             CCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccc
Q 019878           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF  117 (334)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~  117 (334)
                                     .+...+..+.+. ++ ++|.+|+..
T Consensus        80 ---------------~s~~~a~~~~~a-G~-kvId~Sa~~  102 (340)
T 2hjs_A           80 ---------------VSRAHAERARAA-GC-SVIDLSGAL  102 (340)
T ss_dssp             ---------------HHHHHHHHHHHT-TC-EEEETTCTT
T ss_pred             ---------------HHHHHHHHHHHC-CC-EEEEeCCCC
Confidence                           234666777776 44 588888764

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=97.21  E-value=0.00018  Score=62.85  Aligned_cols=105  Identities=17%  Similarity=0.101  Sum_probs=70.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCC-----------CCCCCeEEEEcCCCChhhHHHHhcCCCE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGL-----------PSEGALELVYGDVTDYRSLVDACFGCHV   68 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~-----------~~~~~v~~~~~Dl~d~~~~~~~~~~~d~   68 (334)
                      |||.|+|+ |.+|..++..|+..|+ +|.+.+++++..+..           ....+++.. .|      + ++++++|+
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d------~-~al~~aD~   85 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-NN------Y-EYLQNSDV   85 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SC------G-GGGTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-CC------H-HHHCCCCE
Confidence            57999997 9999999999999998 999999987543210           000122211 12      2 46789999


Q ss_pred             EEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           69 IFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        69 vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      ||-+++...............|+...+.+++.+.++..-..++.+|
T Consensus        86 VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  131 (328)
T 2hjr_A           86 VIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICIT  131 (328)
T ss_dssp             EEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9999976332112223456778888999999888873333555555

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.21  E-value=0.00031  Score=60.99  Aligned_cols=106  Identities=15%  Similarity=0.245  Sum_probs=72.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCCC----C----CCC-CCeEEEEcCCCChhhHHHHhcCCCEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG----L----PSE-GALELVYGDVTDYRSLVDACFGCHVI   69 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~----~----~~~-~~v~~~~~Dl~d~~~~~~~~~~~d~v   69 (334)
                      |||.|+|+ |.+|..++..|+.+|  .+|.++++++++...    +    +.. ..+++.. |  +    .++++++|+|
T Consensus         7 ~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~----~~a~~~aDvV   78 (317)
T 3d0o_A            7 NKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--E----YSDCHDADLV   78 (317)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--C----GGGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--C----HHHhCCCCEE
Confidence            58999998 999999999999877  489999876532110    0    000 1233332 2  2    4458899999


Q ss_pred             EEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        70 ih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      |.+++...............|+...+.+.+.+.++..-..++.+|
T Consensus        79 vi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (317)
T 3d0o_A           79 VICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT  123 (317)
T ss_dssp             EECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence            999987433223334567889999999999999884444666655

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.20  E-value=0.0015  Score=54.61  Aligned_cols=101  Identities=17%  Similarity=0.166  Sum_probs=64.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCC------------------------C--CeEEEEcCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSE------------------------G--ALELVYGDV   53 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~------------------------~--~v~~~~~Dl   53 (334)
                      ++|+|.| .|.+|+.+++.|...|. ++++++++.-...++..+                        +  .++.+..++
T Consensus        32 ~~VlVvG-~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~  110 (249)
T 1jw9_B           32 SRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL  110 (249)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred             CeEEEEe-eCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC
Confidence            4799999 68999999999999995 888888876221111100                        1  245555555


Q ss_pred             CChhhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceec
Q 019878           54 TDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG  120 (334)
Q Consensus        54 ~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~  120 (334)
                      . .+.+.+.+.++|+||.+..               |...-..+.+.|.+. + ..+|..+....+|
T Consensus       111 ~-~~~~~~~~~~~DvVi~~~d---------------~~~~~~~l~~~~~~~-~-~p~i~~~~~g~~g  159 (249)
T 1jw9_B          111 D-DAELAALIAEHDLVLDCTD---------------NVAVRNQLNAGCFAA-K-VPLVSGAAIRMEG  159 (249)
T ss_dssp             C-HHHHHHHHHTSSEEEECCS---------------SHHHHHHHHHHHHHH-T-CCEEEEEEEBTEE
T ss_pred             C-HhHHHHHHhCCCEEEEeCC---------------CHHHHHHHHHHHHHc-C-CCEEEeeeccceE
Confidence            5 3456677889999998753               112234566677776 3 3566665444333

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.15  E-value=8.1e-05  Score=65.89  Aligned_cols=71  Identities=7%  Similarity=-0.022  Sum_probs=49.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChh---hHHHHhc--CCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYR---SLVDACF--GCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~---~~~~~~~--~~d~vih~a~   74 (334)
                      +|||+||+|.||..+++.+...|.+|+++++++++.+.+... +... ..|..+.+   .+.+...  ++|+||+++|
T Consensus       165 ~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~-g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~~~G  240 (354)
T 2j8z_A          165 YVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKL-GAAA-GFNYKKEDFSEATLKFTKGAGVNLILDCIG  240 (354)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-TCSE-EEETTTSCHHHHHHHHTTTSCEEEEEESSC
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc-CCcE-EEecCChHHHHHHHHHhcCCCceEEEECCC
Confidence            599999999999999999999999999999876543322111 1121 23554433   2333332  5899999998

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=97.14  E-value=0.0015  Score=54.19  Aligned_cols=33  Identities=24%  Similarity=0.358  Sum_probs=29.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC-CCeEEEEEcC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRR   33 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~-g~~V~~~~r~   33 (334)
                      |||+|.|++|-+|+.+++.+.+. +++++++...
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~   34 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDA   34 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEcc
Confidence            89999999999999999999865 8998877654

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.13  E-value=1.6e-05  Score=60.72  Aligned_cols=69  Identities=17%  Similarity=0.175  Sum_probs=49.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      ++|+|.| +|.+|+.+++.|.+.|++|++.+|++++...+...-++...     ..+++.+++.++|+||.+.+.
T Consensus        22 ~~v~iiG-~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~-----~~~~~~~~~~~~Divi~at~~   90 (144)
T 3oj0_A           22 NKILLVG-NGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYV-----LINDIDSLIKNNDVIITATSS   90 (144)
T ss_dssp             CEEEEEC-CSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEE-----ECSCHHHHHHTCSEEEECSCC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceE-----eecCHHHHhcCCCEEEEeCCC
Confidence            5799999 59999999999999999999999987653322111012221     223456677889999998874

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=97.13  E-value=0.0006  Score=61.72  Aligned_cols=86  Identities=8%  Similarity=0.177  Sum_probs=58.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC-C---eEEEEEcCCCCCCCCCCCCCeEEEEcCCC--Chhh-HHHHhcCCCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG-H---SVRALVRRTSDISGLPSEGALELVYGDVT--DYRS-LVDACFGCHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g-~---~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~--d~~~-~~~~~~~~d~vih~a   73 (334)
                      |||+|.| +|.||+.+++.|+++. +   +|++++......+ +....++++...+++  |.++ +.+++++.|+|||++
T Consensus        14 ~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~-~~~~~g~~~~~~~Vdadnv~~~l~aLl~~~DvVIN~s   91 (480)
T 2ph5_A           14 NRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVD-VAQQYGVSFKLQQITPQNYLEVIGSTLEENDFLIDVS   91 (480)
T ss_dssp             SCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCC-HHHHHTCEEEECCCCTTTHHHHTGGGCCTTCEEEECC
T ss_pred             CCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhhh-HHhhcCCceeEEeccchhHHHHHHHHhcCCCEEEECC
Confidence            6899999 9999999999999864 4   6888776654422 111113556655554  4434 456777779999976


Q ss_pred             cccCCCCCCcccchhhhhHHHHHHHHHHHhc
Q 019878           74 ALVEPWLPDPSRFFAVNVEGLKNVVQAAKET  104 (334)
Q Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  104 (334)
                      ...                ....++++|.+.
T Consensus        92 ~~~----------------~~l~Im~aclea  106 (480)
T 2ph5_A           92 IGI----------------SSLALIILCNQK  106 (480)
T ss_dssp             SSS----------------CHHHHHHHHHHH
T ss_pred             ccc----------------cCHHHHHHHHHc
Confidence            421                125889999998

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.10  E-value=0.00019  Score=63.10  Aligned_cols=73  Identities=23%  Similarity=0.258  Sum_probs=49.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCCh-hhHHHHhc--CCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY-RSLVDACF--GCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~-~~~~~~~~--~~d~vih~a~~   75 (334)
                      +|||+||+|.+|...++.+...|.+|+++++++++.+.+.+...-..+..+ .+. +.+.+...  ++|+||+++|.
T Consensus       162 ~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~~g~  237 (342)
T 4eye_A          162 TVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLE-EGWAKAVREATGGAGVDMVVDPIGG  237 (342)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESS-TTHHHHHHHHTTTSCEEEEEESCC-
T ss_pred             EEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCc-hhHHHHHHHHhCCCCceEEEECCch
Confidence            599999999999999999999999999999987654322221112233333 222 23333433  49999999983

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=97.10  E-value=0.00074  Score=59.29  Aligned_cols=95  Identities=14%  Similarity=0.077  Sum_probs=57.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCC-CCeEE-EEcCCCChhhHHHHhcCCCEEEEeccccC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSE-GALEL-VYGDVTDYRSLVDACFGCHVIFHTAALVE   77 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~-~~v~~-~~~Dl~d~~~~~~~~~~~d~vih~a~~~~   77 (334)
                      |||.|.|+||.+|+.+++.|.+++ .+++.+.+.......+.+. +.+.- ....+.+.+   + +.++|+|+.+.+.. 
T Consensus         5 ~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~---~-~~~vDvV~~a~g~~-   79 (345)
T 2ozp_A            5 KTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPE---K-LEPADILVLALPHG-   79 (345)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGG---G-CCCCSEEEECCCTT-
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcccccccchh---H-hcCCCEEEEcCCcH-
Confidence            479999999999999999999765 4777776643322212110 00000 001122322   2 46899999988631 


Q ss_pred             CCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccc
Q 019878           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF  117 (334)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~  117 (334)
                                     ....++..+.+. + .++|-+|+..
T Consensus        80 ---------------~s~~~a~~~~~a-G-~~VId~Sa~~  102 (345)
T 2ozp_A           80 ---------------VFAREFDRYSAL-A-PVLVDLSADF  102 (345)
T ss_dssp             ---------------HHHHTHHHHHTT-C-SEEEECSSTT
T ss_pred             ---------------HHHHHHHHHHHC-C-CEEEEcCccc
Confidence                           124555666665 4 3788888853

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=97.09  E-value=0.0012  Score=55.72  Aligned_cols=71  Identities=21%  Similarity=0.204  Sum_probs=44.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC-CCeEEEE-EcCCCCCC--CCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRAL-VRRTSDIS--GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~--~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |||.|.|++|.+|+.+++.+.+. +.+++++ +|+.+...  ...+.-+..  . ++.-.+++.++++++|+||++..
T Consensus         8 ikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~--~-gv~v~~dl~~ll~~~DVVIDfT~   82 (272)
T 4f3y_A            8 MKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQ--T-GVALTDDIERVCAEADYLIDFTL   82 (272)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCC--C-SCBCBCCHHHHHHHCSEEEECSC
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCC--C-CceecCCHHHHhcCCCEEEEcCC
Confidence            47999999999999999999875 5677764 55543211  111100111  0 22223345566678999999863

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.08  E-value=0.0003  Score=61.66  Aligned_cols=71  Identities=18%  Similarity=0.234  Sum_probs=49.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC-CCCCCeEEEEcCCCChhhH---HHHh-cCCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-PSEGALELVYGDVTDYRSL---VDAC-FGCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~v~~~~~Dl~d~~~~---~~~~-~~~d~vih~a~   74 (334)
                      +|||+|++|.||..+++.+...|.+|+++++++++.+.+ .+. +...+ .|..+.+..   .+.. .++|+||+++|
T Consensus       152 ~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~-g~~~~-~~~~~~~~~~~~~~~~~~~~d~vi~~~g  227 (336)
T 4b7c_A          152 TVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL-GFDGA-IDYKNEDLAAGLKRECPKGIDVFFDNVG  227 (336)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT-CCSEE-EETTTSCHHHHHHHHCTTCEEEEEESSC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-CCCEE-EECCCHHHHHHHHHhcCCCceEEEECCC
Confidence            599999999999999999999999999999887544333 222 22221 244443322   2222 25999999997

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.06  E-value=0.00013  Score=64.18  Aligned_cols=94  Identities=12%  Similarity=0.050  Sum_probs=61.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChh---hHHHHhc--CCCEEEEecccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYR---SLVDACF--GCHVIFHTAALV   76 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~---~~~~~~~--~~d~vih~a~~~   76 (334)
                      +|||+|++|.+|..+++.+...|++|+++++++++.+.+... +...+ .|..+.+   .+.+...  ++|+||+++| .
T Consensus       169 ~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~-ga~~~-~d~~~~~~~~~~~~~~~~~~~d~vi~~~g-~  245 (343)
T 2eih_A          169 DVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKAL-GADET-VNYTHPDWPKEVRRLTGGKGADKVVDHTG-A  245 (343)
T ss_dssp             EEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-TCSEE-EETTSTTHHHHHHHHTTTTCEEEEEESSC-S
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc-CCCEE-EcCCcccHHHHHHHHhCCCCceEEEECCC-H
Confidence            699999999999999999999999999999976543322111 12222 3555533   2333332  5899999998 2


Q ss_pred             CCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEeccc
Q 019878           77 EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF  116 (334)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~  116 (334)
                      .               .....++.++.. +  ++|.+++.
T Consensus       246 ~---------------~~~~~~~~l~~~-G--~~v~~g~~  267 (343)
T 2eih_A          246 L---------------YFEGVIKATANG-G--RIAIAGAS  267 (343)
T ss_dssp             S---------------SHHHHHHHEEEE-E--EEEESSCC
T ss_pred             H---------------HHHHHHHhhccC-C--EEEEEecC
Confidence            1               123445555543 3  88888764

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.04  E-value=0.00013  Score=62.00  Aligned_cols=70  Identities=19%  Similarity=0.149  Sum_probs=46.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC-CC-eEEEEcCCCChhhHHHHhcCCCEEEEecccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-GA-LELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~-v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~   76 (334)
                      ++++|+|+ |.+|+++++.|++.|.+|++.+|+.++...+... .. ......|+   +++.+  .++|+||++++..
T Consensus       120 k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~---~~~~~--~~~DivVn~t~~~  191 (271)
T 1nyt_A          120 LRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSM---DELEG--HEFDLIINATSSG  191 (271)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCS---GGGTT--CCCSEEEECCSCG
T ss_pred             CEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecH---HHhcc--CCCCEEEECCCCC
Confidence            46999997 7899999999999999999999986543222110 00 01112232   22222  5799999999863

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.03  E-value=0.00029  Score=60.78  Aligned_cols=70  Identities=20%  Similarity=0.192  Sum_probs=50.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      +|||+|++|.+|..+++.+...|.+|+++++++.+.+.+.+. +...+ .|..+.+.+.+.+.++|+||+ +|
T Consensus       128 ~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~-ga~~~-~~~~~~~~~~~~~~~~d~vid-~g  197 (302)
T 1iz0_A          128 KVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLAL-GAEEA-ATYAEVPERAKAWGGLDLVLE-VR  197 (302)
T ss_dssp             EEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHT-TCSEE-EEGGGHHHHHHHTTSEEEEEE-CS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc-CCCEE-EECCcchhHHHHhcCceEEEE-CC
Confidence            699999999999999999999999999999987654432221 22222 354441334444478999999 87

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=97.03  E-value=0.0022  Score=56.50  Aligned_cols=94  Identities=14%  Similarity=0.038  Sum_probs=53.7

Q ss_pred             CcEEEEcCCChhhHHHHH-HHHhCC---CeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecccc
Q 019878            1 MKILVSGASGYLGGRLCH-ALLKQG---HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~-~L~~~g---~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~   76 (334)
                      |||.|.||||++|+.|++ .|.++.   .++..++-+. ....+....+.....-|..+.+    .++++|+|+-+.+..
T Consensus         1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~-aG~~~~~~~~~~~~~~~~~~~~----~~~~~Dvvf~a~~~~   75 (370)
T 3pzr_A            1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ-IGVPAPNFGKDAGMLHDAFDIE----SLKQLDAVITCQGGS   75 (370)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBCCCSSSCCCBCEETTCHH----HHTTCSEEEECSCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccc-cCcCHHHhCCCceEEEecCChh----HhccCCEEEECCChH
Confidence            899999999999999999 666655   3555554332 1111111111111111222322    257899999988631


Q ss_pred             CCCCCCcccchhhhhHHHHHHHHHHHhcCCC-cEEEEeccc
Q 019878           77 EPWLPDPSRFFAVNVEGLKNVVQAAKETKTV-EKIIYTSSF  116 (334)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~v~~Ss~  116 (334)
                                      .+...+..+.+. ++ +++|=.|+.
T Consensus        76 ----------------~s~~~~~~~~~~-G~k~~VID~ss~   99 (370)
T 3pzr_A           76 ----------------YTEKVYPALRQA-GWKGYWIDAAST   99 (370)
T ss_dssp             ----------------HHHHHHHHHHHT-TCCCEEEECSST
T ss_pred             ----------------HHHHHHHHHHHC-CCCEEEEeCCch
Confidence                            123455555555 45 477777764

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=97.02  E-value=0.00036  Score=60.42  Aligned_cols=106  Identities=19%  Similarity=0.167  Sum_probs=69.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCCCCCC---------CCCeEEEEcCCCChhhHHHHhcCCCEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLPS---------EGALELVYGDVTDYRSLVDACFGCHVI   69 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~---------~~~v~~~~~Dl~d~~~~~~~~~~~d~v   69 (334)
                      |||.|.| +|.+|+.++..|++.|  ++|++++|++++...+..         ...+.....   |   . +.++++|+|
T Consensus         2 ~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---d---~-~~~~~aDvV   73 (309)
T 1hyh_A            2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIN---D---W-AALADADVV   73 (309)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEES---C---G-GGGTTCSEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeC---C---H-HHhCCCCEE
Confidence            6899999 8999999999999988  899999997643321110         002233222   2   2 456789999


Q ss_pred             EEeccccCC----CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           70 FHTAALVEP----WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        70 ih~a~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      |-+++....    ...........|+.....+++.+.++..-..+|.+|
T Consensus        74 iiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~t  122 (309)
T 1hyh_A           74 ISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (309)
T ss_dssp             EECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence            999875331    112233567788888899999988763323555544

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=97.01  E-value=0.0018  Score=56.24  Aligned_cols=107  Identities=16%  Similarity=0.144  Sum_probs=69.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC--eEEEEEcCCCCCC--CC--CC----CCCeEEEEcCCCChhhHHHHhcCCCEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDIS--GL--PS----EGALELVYGDVTDYRSLVDACFGCHVIF   70 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~--~~--~~----~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   70 (334)
                      |||.|.|+ |.+|..++..|+..|+  +|.+++|++++..  .+  ..    .........  .+.    +.+.++|+||
T Consensus         8 mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~----~~~~~aD~Vi   80 (319)
T 1lld_A            8 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDP----EICRDADMVV   80 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCG----GGGTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeC--CCH----HHhCCCCEEE
Confidence            78999997 9999999999999998  9999999763321  00  00    001222211  122    3467899999


Q ss_pred             EeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        71 h~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      -+++...............|+.....+++.+.+...-..+|.++
T Consensus        81 i~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~  124 (319)
T 1lld_A           81 ITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLIT  124 (319)
T ss_dssp             ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEec
Confidence            99875332222334566788888888888888763223444433

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=96.97  E-value=0.001  Score=58.63  Aligned_cols=72  Identities=14%  Similarity=0.142  Sum_probs=49.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChh---hHHHHh--cCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYR---SLVDAC--FGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~---~~~~~~--~~~d~vih~a~~   75 (334)
                      +|||+||+|.+|...++.+...|.+|+++++++++.+.+.+..--..+  |..+.+   .+.+..  .++|+||+++|.
T Consensus       167 ~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~--~~~~~~~~~~v~~~~~~~g~D~vid~~g~  243 (349)
T 3pi7_A          167 AFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVL--NEKAPDFEATLREVMKAEQPRIFLDAVTG  243 (349)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEE--ETTSTTHHHHHHHHHHHHCCCEEEESSCH
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEE--ECCcHHHHHHHHHHhcCCCCcEEEECCCC
Confidence            589999999999999999999999999999887654332221111222  333332   233333  269999999873

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=96.95  E-value=0.00032  Score=62.20  Aligned_cols=95  Identities=17%  Similarity=0.084  Sum_probs=60.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChh---hHHHHh-cCCCEEEEeccccC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYR---SLVDAC-FGCHVIFHTAALVE   77 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~---~~~~~~-~~~d~vih~a~~~~   77 (334)
                      +|||+||+|.+|..+++.+...|.+|+++++++++.+.+.+. +...+ .|..+.+   .+.+.. .++|+||+++|.  
T Consensus       166 ~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~-Ga~~~-~~~~~~~~~~~~~~~~~~g~D~vid~~g~--  241 (362)
T 2c0c_A          166 KVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSL-GCDRP-INYKTEPVGTVLKQEYPEGVDVVYESVGG--  241 (362)
T ss_dssp             EEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-TCSEE-EETTTSCHHHHHHHHCTTCEEEEEECSCT--
T ss_pred             EEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHc-CCcEE-EecCChhHHHHHHHhcCCCCCEEEECCCH--
Confidence            699999999999999999999999999999876543222111 22221 2333322   222222 258999999872  


Q ss_pred             CCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccc
Q 019878           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF  117 (334)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~  117 (334)
                                    ......++.++.. +  ++|.+++..
T Consensus       242 --------------~~~~~~~~~l~~~-G--~iv~~g~~~  264 (362)
T 2c0c_A          242 --------------AMFDLAVDALATK-G--RLIVIGFIS  264 (362)
T ss_dssp             --------------HHHHHHHHHEEEE-E--EEEECCCGG
T ss_pred             --------------HHHHHHHHHHhcC-C--EEEEEeCCC
Confidence                          1223445555443 3  899888653

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.93  E-value=0.0016  Score=56.08  Aligned_cols=53  Identities=23%  Similarity=0.297  Sum_probs=43.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |+|.|.||+|.+|+.+++.|.+.|++|++.+|++..                     ...+++.++|+||-+..
T Consensus        22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~---------------------~~~~~~~~aDvVilavp   74 (298)
T 2pv7_A           22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA---------------------VAESILANADVVIVSVP   74 (298)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG---------------------GHHHHHTTCSEEEECSC
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc---------------------CHHHHhcCCCEEEEeCC
Confidence            379999999999999999999999999999876531                     24556778998887753

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=96.93  E-value=0.00039  Score=61.35  Aligned_cols=94  Identities=18%  Similarity=0.215  Sum_probs=56.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCC----CCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPS----EGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~----~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      |||.|.||+|.+|+.+++.|.++. .+++++.+..+....+.+    ..+..  ..|+.-.+  .+.++++|+|+.+.+.
T Consensus        17 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v--~~dl~~~~--~~~~~~vDvVf~atp~   92 (359)
T 1xyg_A           17 IRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQK--LPTLVSVK--DADFSTVDAVFCCLPH   92 (359)
T ss_dssp             EEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSC--CCCCBCGG--GCCGGGCSEEEECCCT
T ss_pred             cEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcc--cccceecc--hhHhcCCCEEEEcCCc
Confidence            379999999999999999999875 477777654332211110    00100  12433222  3345689999998863


Q ss_pred             cCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccc
Q 019878           76 VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF  117 (334)
Q Consensus        76 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~  117 (334)
                      ..                +...+..+ +. + .++|-.|+..
T Consensus        93 ~~----------------s~~~a~~~-~a-G-~~VId~sa~~  115 (359)
T 1xyg_A           93 GT----------------TQEIIKEL-PT-A-LKIVDLSADF  115 (359)
T ss_dssp             TT----------------HHHHHHTS-CT-T-CEEEECSSTT
T ss_pred             hh----------------HHHHHHHH-hC-C-CEEEECCccc
Confidence            11                13444555 44 3 3788888753

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=96.89  E-value=0.0013  Score=50.79  Aligned_cols=67  Identities=18%  Similarity=0.091  Sum_probs=48.8

Q ss_pred             CChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-------CC-CCeEEEEcCCCCh--hhHHHHhc------CCCEEEEe
Q 019878            9 SGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-------SE-GALELVYGDVTDY--RSLVDACF------GCHVIFHT   72 (334)
Q Consensus         9 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~-~~v~~~~~Dl~d~--~~~~~~~~------~~d~vih~   72 (334)
                      +|+++...++.|.+.|.+|++..|+.......+       .. .....+++|++++  +++.++++      +-|++|||
T Consensus        25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVLVnn  104 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVLVHC  104 (157)
T ss_dssp             EBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEEEEC
T ss_pred             cCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEEEEC
Confidence            578999999999999999999888655432210       01 2356678899998  77766542      23999999


Q ss_pred             ccc
Q 019878           73 AAL   75 (334)
Q Consensus        73 a~~   75 (334)
                      ||.
T Consensus       105 Agg  107 (157)
T 3gxh_A          105 LAN  107 (157)
T ss_dssp             SBS
T ss_pred             CCC
Confidence            984

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=96.89  E-value=0.00044  Score=60.55  Aligned_cols=93  Identities=16%  Similarity=0.151  Sum_probs=59.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChh---hHHHHhc--CCCEEEEecccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYR---SLVDACF--GCHVIFHTAALV   76 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~---~~~~~~~--~~d~vih~a~~~   76 (334)
                      +|||+||+|.+|...++.+...|.+|+++++++++.+...+.+.-..+  |..+.+   .+.+...  ++|+||+++|..
T Consensus       151 ~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~--~~~~~~~~~~~~~~~~~~g~D~vid~~g~~  228 (334)
T 3qwb_A          151 YVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLI--NASKEDILRQVLKFTNGKGVDASFDSVGKD  228 (334)
T ss_dssp             EEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEE--ETTTSCHHHHHHHHTTTSCEEEEEECCGGG
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEE--eCCCchHHHHHHHHhCCCCceEEEECCChH
Confidence            599999999999999999999999999999976543322221111222  333332   3333332  499999999831


Q ss_pred             CCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecc
Q 019878           77 EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (334)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss  115 (334)
                                      .....++.++.. +  ++|.++.
T Consensus       229 ----------------~~~~~~~~l~~~-G--~iv~~G~  248 (334)
T 3qwb_A          229 ----------------TFEISLAALKRK-G--VFVSFGN  248 (334)
T ss_dssp             ----------------GHHHHHHHEEEE-E--EEEECCC
T ss_pred             ----------------HHHHHHHHhccC-C--EEEEEcC
Confidence                            123444544443 3  8888775

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=96.87  E-value=0.00011  Score=65.08  Aligned_cols=70  Identities=16%  Similarity=0.262  Sum_probs=51.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC--CCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      +|+|+|+ |-+|..+++.|...|.+|++++|++++.+.+.+.  ..+..+   ..+.+.+.+.+.++|+||++++.
T Consensus       169 ~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~DvVI~~~~~  240 (361)
T 1pjc_A          169 KVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELL---YSNSAEIETAVAEADLLIGAVLV  240 (361)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEE---ECCHHHHHHHHHTCSEEEECCCC
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEee---eCCHHHHHHHHcCCCEEEECCCc
Confidence            6999998 9999999999999999999999987643322110  012121   12445667777899999999875

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=96.86  E-value=0.00044  Score=63.56  Aligned_cols=108  Identities=19%  Similarity=0.139  Sum_probs=61.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC------CCeE-EE-----EcCCCChhhHHHHhcCCCE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE------GALE-LV-----YGDVTDYRSLVDACFGCHV   68 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~v~-~~-----~~Dl~d~~~~~~~~~~~d~   68 (334)
                      |||.|.| +|++|..++..|++.|++|+++++++++.+.+...      ++++ .+     .+.+.-..++.++++++|+
T Consensus         9 ~~I~VIG-~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aDv   87 (478)
T 2y0c_A            9 MNLTIIG-SGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDV   87 (478)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCSE
T ss_pred             ceEEEEC-cCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCCE
Confidence            8999998 99999999999999999999999976543222111      0110 00     0001111223456677999


Q ss_pred             EEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcE-EEEecc
Q 019878           69 IFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEK-IIYTSS  115 (334)
Q Consensus        69 vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~v~~Ss  115 (334)
                      ||-+......      ..-..++..+..+++...+.-.-.. +|..||
T Consensus        88 viiaVptp~~------~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~ST  129 (478)
T 2y0c_A           88 QFIAVGTPPD------EDGSADLQYVLAAARNIGRYMTGFKVIVDKST  129 (478)
T ss_dssp             EEECCCCCBC------TTSSBCCHHHHHHHHHHHHHCCSCEEEEECSC
T ss_pred             EEEEeCCCcc------cCCCccHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence            9987653111      1112445555666665555422223 444443

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.85  E-value=0.00086  Score=58.34  Aligned_cols=65  Identities=15%  Similarity=0.220  Sum_probs=49.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |||.|.| +|.+|..+++.|++.|++|++.+|++++.+.+... ++..       ..++.++++++|+||-+..
T Consensus        32 ~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~-g~~~-------~~~~~e~~~~aDvVi~~vp   96 (320)
T 4dll_A           32 RKITFLG-TGSMGLPMARRLCEAGYALQVWNRTPARAASLAAL-GATI-------HEQARAAARDADIVVSMLE   96 (320)
T ss_dssp             SEEEEEC-CTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT-TCEE-------ESSHHHHHTTCSEEEECCS
T ss_pred             CEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHC-CCEe-------eCCHHHHHhcCCEEEEECC
Confidence            6899997 79999999999999999999999987654433221 2322       2345667788999997753

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=96.84  E-value=0.00035  Score=62.98  Aligned_cols=72  Identities=21%  Similarity=0.237  Sum_probs=46.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC------CCeE-EE---EcCCCChhhHHHHhcCCCEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE------GALE-LV---YGDVTDYRSLVDACFGCHVIF   70 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~v~-~~---~~Dl~d~~~~~~~~~~~d~vi   70 (334)
                      |||.|.| +|++|..++..|++ |++|+++++++++.+.+...      ++++ .+   .+.+.-..++.++++++|+||
T Consensus        37 mkIaVIG-lG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~aDvVi  114 (432)
T 3pid_A           37 MKITISG-TGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRNADYVI  114 (432)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTTCSEEE
T ss_pred             CEEEEEC-cCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhCCCEEE
Confidence            7899998 79999999999987 99999999987643322210      0000 00   011111223556778899998


Q ss_pred             Eecc
Q 019878           71 HTAA   74 (334)
Q Consensus        71 h~a~   74 (334)
                      -+..
T Consensus       115 iaVP  118 (432)
T 3pid_A          115 IATP  118 (432)
T ss_dssp             ECCC
T ss_pred             EeCC
Confidence            7754

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=96.83  E-value=0.00082  Score=59.66  Aligned_cols=94  Identities=19%  Similarity=0.109  Sum_probs=63.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-CCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-SEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~   80 (334)
                      +|||+|+ |.+|...++.+...|.+|+++++++++.+... .. +...+ .|..+.+.+.++..++|+||+++|....  
T Consensus       190 ~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l-Ga~~v-~~~~~~~~~~~~~~~~D~vid~~g~~~~--  264 (366)
T 1yqd_A          190 HIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF-GADSF-LVSRDQEQMQAAAGTLDGIIDTVSAVHP--  264 (366)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS-CCSEE-EETTCHHHHHHTTTCEEEEEECCSSCCC--
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-CCceE-EeccCHHHHHHhhCCCCEEEECCCcHHH--
Confidence            6999995 99999999999999999999998876543221 11 22222 3666666676666789999999974210  


Q ss_pred             CCcccchhhhhHHHHHHHHHHHhcCCCcEEEEeccc
Q 019878           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF  116 (334)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~  116 (334)
                                   ....++.++..   .++|.+++.
T Consensus       265 -------------~~~~~~~l~~~---G~iv~~g~~  284 (366)
T 1yqd_A          265 -------------LLPLFGLLKSH---GKLILVGAP  284 (366)
T ss_dssp             -------------SHHHHHHEEEE---EEEEECCCC
T ss_pred             -------------HHHHHHHHhcC---CEEEEEccC
Confidence                         12344444443   388888763

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=96.82  E-value=0.0037  Score=55.25  Aligned_cols=94  Identities=17%  Similarity=0.076  Sum_probs=53.7

Q ss_pred             CcEEEEcCCChhhHHHHH-HHHhCC---CeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecccc
Q 019878            1 MKILVSGASGYLGGRLCH-ALLKQG---HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~-~L~~~g---~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~   76 (334)
                      |||.|.||||++|+.|++ .|.++.   .++..++-+ .....+....+.....-++.+.+    .++++|+|+-+.+..
T Consensus         5 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~-~aG~~~~~~~~~~~~v~~~~~~~----~~~~vDvvf~a~~~~   79 (377)
T 3uw3_A            5 MNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS-NAGGKAPSFAKNETTLKDATSID----DLKKCDVIITCQGGD   79 (377)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-CTTSBCCTTCCSCCBCEETTCHH----HHHTCSEEEECSCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEech-hcCCCHHHcCCCceEEEeCCChh----HhcCCCEEEECCChH
Confidence            789999999999999999 666655   355555433 21111111111111111222322    246899999988631


Q ss_pred             CCCCCCcccchhhhhHHHHHHHHHHHhcCCC-cEEEEeccc
Q 019878           77 EPWLPDPSRFFAVNVEGLKNVVQAAKETKTV-EKIIYTSSF  116 (334)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~v~~Ss~  116 (334)
                                      .+...+..+.+. ++ +++|=.|+.
T Consensus        80 ----------------~s~~~~~~~~~~-G~k~~VID~ss~  103 (377)
T 3uw3_A           80 ----------------YTNDVFPKLRAA-GWNGYWIDAASS  103 (377)
T ss_dssp             ----------------HHHHHHHHHHHT-TCCSEEEECSST
T ss_pred             ----------------HHHHHHHHHHHC-CCCEEEEeCCcc
Confidence                            124555555565 55 477777764

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=96.80  E-value=0.00039  Score=61.44  Aligned_cols=72  Identities=15%  Similarity=0.132  Sum_probs=49.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChh---hHHHHh-cCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYR---SLVDAC-FGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~---~~~~~~-~~~d~vih~a~~   75 (334)
                      +|||+||+|.+|..+++.+...|.+|+++++++++.+.+.+.+.-..  .|..+.+   .+.+.. .++|+||+++|.
T Consensus       170 ~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~--~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  245 (353)
T 4dup_A          170 SVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRG--INYRSEDFAAVIKAETGQGVDIILDMIGA  245 (353)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEE--EETTTSCHHHHHHHHHSSCEEEEEESCCG
T ss_pred             EEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEE--EeCCchHHHHHHHHHhCCCceEEEECCCH
Confidence            59999999999999999999999999999988754332221111122  2444332   222222 259999999983

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.80  E-value=0.00022  Score=61.33  Aligned_cols=72  Identities=19%  Similarity=0.191  Sum_probs=50.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      ++++|+|+ |.+|+.++..|.+.|. +|++.+|+.++...+...-+...  .+..+.+++.+.+.++|+||++.+.
T Consensus       142 ~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~--~~~~~~~~~~~~~~~aDivIn~t~~  214 (297)
T 2egg_A          142 KRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERR--SAYFSLAEAETRLAEYDIIINTTSV  214 (297)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSS--CCEECHHHHHHTGGGCSEEEECSCT
T ss_pred             CEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhcc--CceeeHHHHHhhhccCCEEEECCCC
Confidence            47999996 7899999999999997 99999998754332211000000  0122335667778889999999986

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=96.79  E-value=0.0033  Score=55.96  Aligned_cols=67  Identities=24%  Similarity=0.235  Sum_probs=53.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFH   71 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih   71 (334)
                      ++|+|+| .|.+|..+++.+.+.|++|++++..+.......   .-.++.+|..|.+.+.++.+++|+|.-
T Consensus        13 ~~IlIlG-~G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~---ad~~~~~~~~d~~~l~~~~~~~dvi~~   79 (377)
T 3orq_A           13 ATIGIIG-GGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYV---AHEFIQAKYDDEKALNQLGQKCDVITY   79 (377)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCTTCTTGGG---SSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCCCChhhhh---CCEEEECCCCCHHHHHHHHHhCCccee
Confidence            3699999 789999999999999999999987654322111   125677899999999999888998753

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=96.78  E-value=0.0036  Score=53.98  Aligned_cols=107  Identities=15%  Similarity=0.214  Sum_probs=72.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCC----CCC-----CCCeEEEEcCCCChhhHHHHhcCCCEEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISG----LPS-----EGALELVYGDVTDYRSLVDACFGCHVIFH   71 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~----~~~-----~~~v~~~~~Dl~d~~~~~~~~~~~d~vih   71 (334)
                      ||.|+|+ |.+|..++..|+..|. +|..+++++++...    +..     ....++...  .|   . ++++++|+||-
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d---~-~a~~~aD~Vi~   73 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS--NS---Y-EDMRGSDIVLV   73 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE--SC---G-GGGTTCSEEEE
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC--CC---H-HHhCCCCEEEE
Confidence            6899997 9999999999988776 69999998653321    000     001122210  12   2 46889999999


Q ss_pred             eccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecc
Q 019878           72 TAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (334)
Q Consensus        72 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss  115 (334)
                      .++...............|+.-.+.+++.+.++..-..+|.+|-
T Consensus        74 ~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  117 (308)
T 2d4a_B           74 TAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTN  117 (308)
T ss_dssp             CCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             eCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            99874433233445678899999999999988743346777663

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.77  E-value=0.0021  Score=55.16  Aligned_cols=64  Identities=19%  Similarity=0.223  Sum_probs=48.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |||.|.| +|.+|..+++.|++.|++|++.+|++++.+.+... +++.       ..++.++++ +|+||-+..
T Consensus        16 ~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~-g~~~-------~~~~~~~~~-aDvvi~~vp   79 (296)
T 3qha_A           16 LKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEA-GATL-------ADSVADVAA-ADLIHITVL   79 (296)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHT-TCEE-------CSSHHHHTT-SSEEEECCS
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC-CCEE-------cCCHHHHHh-CCEEEEECC
Confidence            4799998 89999999999999999999999998865543321 2222       234566777 999997764

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.77  E-value=0.008  Score=50.19  Aligned_cols=101  Identities=20%  Similarity=0.197  Sum_probs=62.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCC------------------------CC--eEEEEcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSE------------------------GA--LELVYGDVT   54 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~------------------------~~--v~~~~~Dl~   54 (334)
                      +|+|.|+ |.+|+++++.|...|. ++++++++.-...++..+                        +.  ++.+..++.
T Consensus        30 ~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~~  108 (251)
T 1zud_1           30 QVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRLT  108 (251)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCCC
T ss_pred             cEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence            6999995 6699999999999995 777877754322222111                        12  344444443


Q ss_pred             ChhhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceecc
Q 019878           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS  121 (334)
Q Consensus        55 d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~  121 (334)
                       .+.+.+.++++|+||.+..               |...-..+.++|.+. + ..+|..+....+|.
T Consensus       109 -~~~~~~~~~~~DvVi~~~d---------------~~~~r~~l~~~~~~~-~-~p~i~~~~~g~~G~  157 (251)
T 1zud_1          109 -GEALKDAVARADVVLDCTD---------------NMATRQEINAACVAL-N-TPLITASAVGFGGQ  157 (251)
T ss_dssp             -HHHHHHHHHHCSEEEECCS---------------SHHHHHHHHHHHHHT-T-CCEEEEEEEBTEEE
T ss_pred             -HHHHHHHHhcCCEEEECCC---------------CHHHHHHHHHHHHHh-C-CCEEEEeccccceE
Confidence             3556777788999998742               222234556667665 3 35777766554443

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=96.76  E-value=0.00029  Score=62.12  Aligned_cols=72  Identities=15%  Similarity=0.177  Sum_probs=49.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhC-CCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhh---HHHHhc--CCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRS---LVDACF--GCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~---~~~~~~--~~d~vih~a~~   75 (334)
                      +|||+|++|.+|..+++.+... |.+|+++++++.+.+.+.+. +...+ .|..+.+.   +.+...  ++|+||+++|.
T Consensus       173 ~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~-g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~  250 (347)
T 1jvb_A          173 TLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA-GADYV-INASMQDPLAEIRRITESKGVDAVIDLNNS  250 (347)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH-TCSEE-EETTTSCHHHHHHHHTTTSCEEEEEESCCC
T ss_pred             EEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh-CCCEE-ecCCCccHHHHHHHHhcCCCceEEEECCCC
Confidence            5999999999999999999998 99999999876543322111 11111 24444332   444443  59999999983

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=96.76  E-value=0.0008  Score=59.04  Aligned_cols=72  Identities=13%  Similarity=0.123  Sum_probs=50.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChh---hHHHHhc--CCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYR---SLVDACF--GCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~---~~~~~~~--~~d~vih~a~~   75 (334)
                      +|||+|++|.+|...++.+...|.+|+++++++++.+.+.+. +...+ .|..+.+   .+.+...  ++|+||+++|.
T Consensus       147 ~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l-ga~~~-~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  223 (340)
T 3gms_A          147 VLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRL-GAAYV-IDTSTAPLYETVMELTNGIGADAAIDSIGG  223 (340)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH-TCSEE-EETTTSCHHHHHHHHTTTSCEEEEEESSCH
T ss_pred             EEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhC-CCcEE-EeCCcccHHHHHHHHhCCCCCcEEEECCCC
Confidence            599999999999999999999999999999988764432221 12211 2444332   2333333  59999999983

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=96.74  E-value=0.0004  Score=60.60  Aligned_cols=72  Identities=19%  Similarity=0.282  Sum_probs=49.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChh---hHHHHhc--CCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYR---SLVDACF--GCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~---~~~~~~~--~~d~vih~a~~   75 (334)
                      +|||+||+|.+|...++.+...|.+|+++++++.+.+.+.+...-..+  |..+.+   .+.+...  ++|+||+++|.
T Consensus       143 ~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~--~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  219 (325)
T 3jyn_A          143 IILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETI--DYSHEDVAKRVLELTDGKKCPVVYDGVGQ  219 (325)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEE--ETTTSCHHHHHHHHTTTCCEEEEEESSCG
T ss_pred             EEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEE--eCCCccHHHHHHHHhCCCCceEEEECCCh
Confidence            599999999999999999999999999999876543322211111222  444332   3333333  59999999983

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=96.73  E-value=0.0011  Score=60.60  Aligned_cols=34  Identities=26%  Similarity=0.289  Sum_probs=32.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC-CC-eEEEEEcCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ-GH-SVRALVRRTS   35 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~-g~-~V~~~~r~~~   35 (334)
                      |||.|.| +|++|..++..|++. |+ +|++++++++
T Consensus        19 mkIaVIG-lG~mG~~lA~~la~~~G~~~V~~~D~~~~   54 (478)
T 3g79_A           19 KKIGVLG-MGYVGIPAAVLFADAPCFEKVLGFQRNSK   54 (478)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred             CEEEEEC-cCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence            7899998 899999999999999 99 9999999988

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.72  E-value=0.00043  Score=59.25  Aligned_cols=65  Identities=25%  Similarity=0.304  Sum_probs=49.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |||.|.| +|.+|+.+++.|.+.|++|++.+|++++.+.+... ++..       ..++.++++++|+||-+..
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-g~~~-------~~~~~~~~~~aDvvi~~vp   66 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAAL-GAER-------AATPCEVVESCPVTFAMLA   66 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHT-TCEE-------CSSHHHHHHHCSEEEECCS
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-CCee-------cCCHHHHHhcCCEEEEEcC
Confidence            8999998 79999999999999999999999988765433221 2221       2345666778999997753

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=96.70  E-value=0.0013  Score=57.88  Aligned_cols=93  Identities=19%  Similarity=0.247  Sum_probs=53.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC---eEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH---SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVE   77 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~   77 (334)
                      |||.|.||||++|+.|++.|.++++   ++..+..+......+.. .+.....-++. .    ..++++|+|+-+.+.. 
T Consensus         3 ~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~-~~~~~~~~~~~-~----~~~~~~Dvvf~a~~~~-   75 (366)
T 3pwk_A            3 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKF-KDQDITIEETT-E----TAFEGVDIALFSAGSS-   75 (366)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEE-TTEEEEEEECC-T----TTTTTCSEEEECSCHH-
T ss_pred             cEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCccee-cCCCceEeeCC-H----HHhcCCCEEEECCChH-
Confidence            4799999999999999999998754   34444322221111110 01111111111 1    1246899999887631 


Q ss_pred             CCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccc
Q 019878           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF  117 (334)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~  117 (334)
                                     .+...+..+.+. ++ ++|-.|+..
T Consensus        76 ---------------~s~~~a~~~~~~-G~-~vIDlSa~~   98 (366)
T 3pwk_A           76 ---------------TSAKYAPYAVKA-GV-VVVDNTSYF   98 (366)
T ss_dssp             ---------------HHHHHHHHHHHT-TC-EEEECSSTT
T ss_pred             ---------------hHHHHHHHHHHC-CC-EEEEcCCcc
Confidence                           124555555555 33 788888753

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.66  E-value=0.0019  Score=54.05  Aligned_cols=66  Identities=18%  Similarity=0.293  Sum_probs=50.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      +++|+| +|..|++++..|.+.|. +|++.+|+.++...+..  .....     ..+++.+.++++|+||++-..
T Consensus       110 ~vliiG-aGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~--~~~~~-----~~~~~~~~~~~aDiVInatp~  176 (253)
T 3u62_A          110 PVVVVG-AGGAARAVIYALLQMGVKDIWVVNRTIERAKALDF--PVKIF-----SLDQLDEVVKKAKSLFNTTSV  176 (253)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCS--SCEEE-----EGGGHHHHHHTCSEEEECSST
T ss_pred             eEEEEC-cHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH--HcccC-----CHHHHHhhhcCCCEEEECCCC
Confidence            589999 59999999999999997 89999999876655544  22222     234566778889999998754

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=96.61  E-value=0.0066  Score=52.42  Aligned_cols=64  Identities=17%  Similarity=0.239  Sum_probs=50.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      |+|.|.| .|-||+.+++.|...|.+|++.+|++....      .+....    ...++.++++++|+|+.+...
T Consensus       140 ~tvGIiG-~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~------~~~~~~----~~~~l~ell~~aDiV~l~~Pl  203 (315)
T 3pp8_A          140 FSVGIMG-AGVLGAKVAESLQAWGFPLRCWSRSRKSWP------GVESYV----GREELRAFLNQTRVLINLLPN  203 (315)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHTTTCCEEEEESSCCCCT------TCEEEE----SHHHHHHHHHTCSEEEECCCC
T ss_pred             CEEEEEe-eCHHHHHHHHHHHHCCCEEEEEcCCchhhh------hhhhhc----ccCCHHHHHhhCCEEEEecCC
Confidence            5799999 899999999999999999999999876432      222221    236788899999999887653

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=96.60  E-value=0.00031  Score=62.57  Aligned_cols=73  Identities=16%  Similarity=0.133  Sum_probs=51.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      ++|+|+|+ |-+|..+++.+...|.+|++++|++.+.+.+.+..+..+ ..+..+.+.+.+.+.++|+||++++.
T Consensus       169 ~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~-~~~~~~~~~l~~~l~~aDvVi~~~~~  241 (377)
T 2vhw_A          169 ADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRI-HTRYSSAYELEGAVKRADLVIGAVLV  241 (377)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSS-EEEECCHHHHHHHHHHCSEEEECCCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCee-EeccCCHHHHHHHHcCCCEEEECCCc
Confidence            36999997 999999999999999999999998654321111001110 11233456677788889999998874

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=96.58  E-value=0.0014  Score=59.88  Aligned_cols=36  Identities=28%  Similarity=0.273  Sum_probs=32.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~   37 (334)
                      +|||+|++|.||...++.+...|.+|+++++++.+.
T Consensus       223 ~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~  258 (447)
T 4a0s_A          223 IVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKE  258 (447)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            599999999999999999999999999999876543

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=96.58  E-value=0.0011  Score=57.77  Aligned_cols=71  Identities=20%  Similarity=0.167  Sum_probs=46.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCCh--hhHHHHh-cCCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY--RSLVDAC-FGCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~--~~~~~~~-~~~d~vih~a~   74 (334)
                      +|||+|++|.+|...++.+...|.+|+++++++++.+.+.+. +...+ .|..+.  +.+.++. .++|+||+++|
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~l-Ga~~~-i~~~~~~~~~~~~~~~~~~d~vid~~g  225 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVL-GAKEV-LAREDVMAERIRPLDKQRWAAAVDPVG  225 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHT-TCSEE-EECC---------CCSCCEEEEEECST
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc-CCcEE-EecCCcHHHHHHHhcCCcccEEEECCc
Confidence            699999999999999999999999999999987654332222 22221 233332  1122222 24899999987

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=96.57  E-value=0.0034  Score=57.00  Aligned_cols=107  Identities=16%  Similarity=0.176  Sum_probs=64.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEE-------------cCCCChhhHHHHhcCCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVY-------------GDVTDYRSLVDACFGCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~-------------~Dl~d~~~~~~~~~~~d~   68 (334)
                      +|.|.| +|++|..++..|++.|++|++.+|++++.+.+... ....+.             +.+.-..++.++++++|+
T Consensus        10 ~~~vIG-lG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g-~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDv   87 (446)
T 4a7p_A           10 RIAMIG-TGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQN-VMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADA   87 (446)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTT-CCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSE
T ss_pred             EEEEEc-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcC-CCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCE
Confidence            688888 99999999999999999999999998865544331 111111             111112345567788999


Q ss_pred             EEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEecc
Q 019878           69 IFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSS  115 (334)
Q Consensus        69 vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~Ss  115 (334)
                      ||-+.+....  .   ..-..++.....+++...+.-. -.-+|..||
T Consensus        88 vii~Vptp~~--~---~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~ST  130 (446)
T 4a7p_A           88 VFIAVGTPSR--R---GDGHADLSYVFAAAREIAENLTKPSVIVTKST  130 (446)
T ss_dssp             EEECCCCCBC--T---TTCCBCTHHHHHHHHHHHHSCCSCCEEEECSC
T ss_pred             EEEEcCCCCc--c---ccCCccHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence            9987653110  0   0113345555666666655422 234555554

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=96.57  E-value=0.021  Score=53.65  Aligned_cols=68  Identities=24%  Similarity=0.211  Sum_probs=57.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHh-cCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC-FGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~-~~~d~vih~a~   74 (334)
                      |+++|.| .|-+|.++++.|.+.|++|++++.+++....+.     .++.||.+|.+.+.++- +++|.+|-+.+
T Consensus       349 ~~viIiG-~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~-----~~i~gD~t~~~~L~~agi~~ad~vi~~~~  417 (565)
T 4gx0_A          349 ELIFIIG-HGRIGCAAAAFLDRKPVPFILIDRQESPVCNDH-----VVVYGDATVGQTLRQAGIDRASGIIVTTN  417 (565)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSS-----CEEESCSSSSTHHHHHTTTSCSEEEECCS
T ss_pred             CCEEEEC-CCHHHHHHHHHHHHCCCCEEEEECChHHHhhcC-----CEEEeCCCCHHHHHhcCccccCEEEEECC
Confidence            5789999 599999999999999999999999998765542     78999999999988764 66999986654

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=96.56  E-value=0.00039  Score=60.20  Aligned_cols=72  Identities=19%  Similarity=0.267  Sum_probs=46.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEE--------cCCCChhhHHHHhcCCCEEEEe
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVY--------GDVTDYRSLVDACFGCHVIFHT   72 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~--------~Dl~d~~~~~~~~~~~d~vih~   72 (334)
                      |||.|.| +|.+|+.++..|.+.|++|++++|++++.+.+... ++....        .+..+.+++.+.++++|+||-+
T Consensus         4 m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~   81 (316)
T 2ew2_A            4 MKIAIAG-AGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKN-GLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIAL   81 (316)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH-CEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEEC
T ss_pred             CeEEEEC-cCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhC-CEEEEeCCCeeEecceeecchhhcccCCCCCEEEEE
Confidence            7899999 59999999999999999999999976543322111 222211        1122333333334578988877


Q ss_pred             cc
Q 019878           73 AA   74 (334)
Q Consensus        73 a~   74 (334)
                      ..
T Consensus        82 v~   83 (316)
T 2ew2_A           82 TK   83 (316)
T ss_dssp             SC
T ss_pred             ec
Confidence            53

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.56  E-value=0.019  Score=48.87  Aligned_cols=96  Identities=11%  Similarity=0.128  Sum_probs=59.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCC-----------------------C--CeEEEEcCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSE-----------------------G--ALELVYGDVTD   55 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~-----------------------~--~v~~~~~Dl~d   55 (334)
                      +|+|.| .|.+|+.+++.|...| -++.++|.+.-...++...                       +  .++.+..++++
T Consensus        38 ~VlVvG-aGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~~l~~  116 (292)
T 3h8v_A           38 AVAIVG-VGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYNITT  116 (292)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECCCTTS
T ss_pred             eEEEEC-cCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecccCCc
Confidence            699998 7999999999999988 5788888765332222211                       1  34555566665


Q ss_pred             hhhHHHHh-----------cCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecc
Q 019878           56 YRSLVDAC-----------FGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (334)
Q Consensus        56 ~~~~~~~~-----------~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss  115 (334)
                      .+.+...+           .++|+||.+.               .|...-..+-++|.+. ++ .+|+.+.
T Consensus       117 ~~~~~~~~~~~~~~~l~~~~~~DlVid~~---------------Dn~~~R~~in~~c~~~-~~-Pli~~gv  170 (292)
T 3h8v_A          117 VENFQHFMDRISNGGLEEGKPVDLVLSCV---------------DNFEARMTINTACNEL-GQ-TWMESGV  170 (292)
T ss_dssp             HHHHHHHHHHHHHBSSSTTBCCSEEEECC---------------SSHHHHHHHHHHHHHH-TC-CEEEEEE
T ss_pred             HHHHHHHhhhhcccccccCCCCCEEEECC---------------cchhhhhHHHHHHHHh-CC-CEEEeee
Confidence            55554443           4688888664               2333345667778777 33 5666554

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=96.55  E-value=0.0052  Score=53.52  Aligned_cols=94  Identities=22%  Similarity=0.213  Sum_probs=55.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC-CCeEEEEEcCC---CCCCC-------CCCCCCeEEEEcCCCChhhHHHHhcCCCEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRT---SDISG-------LPSEGALELVYGDVTDYRSLVDACFGCHVI   69 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~-g~~V~~~~r~~---~~~~~-------~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   69 (334)
                      |||.|.|+||++|+.+++.|.+. +.++..+..+.   .....       +.......+...  .+.   .++.+++|+|
T Consensus         5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~--~~~---~~~~~~~Dvv   79 (337)
T 3dr3_A            5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPM--SDI---SEFSPGVDVV   79 (337)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEE--SSG---GGTCTTCSEE
T ss_pred             eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEecc--CCH---HHHhcCCCEE
Confidence            48999999999999999999984 56787775544   21111       111001222211  011   1223689999


Q ss_pred             EEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccc
Q 019878           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF  117 (334)
Q Consensus        70 ih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~  117 (334)
                      +-+.+..                .+...+..+.+. + .++|-.|+..
T Consensus        80 f~a~p~~----------------~s~~~~~~~~~~-g-~~vIDlSa~f  109 (337)
T 3dr3_A           80 FLATAHE----------------VSHDLAPQFLEA-G-CVVFDLSGAF  109 (337)
T ss_dssp             EECSCHH----------------HHHHHHHHHHHT-T-CEEEECSSTT
T ss_pred             EECCChH----------------HHHHHHHHHHHC-C-CEEEEcCCcc
Confidence            9876531                124555555555 3 3788888763

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=96.55  E-value=0.001  Score=58.56  Aligned_cols=70  Identities=17%  Similarity=0.107  Sum_probs=47.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCCeEEEEcCCCChh---hHHHHhc--CCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYR---SLVDACF--GCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~---~~~~~~~--~~d~vih~a~   74 (334)
                      +|||+|+ |.+|..+++.+...|. +|+++++++++.+.+.+. +...+ .|..+.+   .+.++..  ++|+||+++|
T Consensus       170 ~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~-Ga~~~-~~~~~~~~~~~v~~~~~g~g~D~vid~~g  245 (348)
T 2d8a_A          170 SVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV-GADYV-INPFEEDVVKEVMDITDGNGVDVFLEFSG  245 (348)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH-TCSEE-ECTTTSCHHHHHHHHTTTSCEEEEEECSC
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-CCCEE-ECCCCcCHHHHHHHHcCCCCCCEEEECCC
Confidence            6999999 9999999999999998 999999886543222111 12211 2444332   2333332  5999999987

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=96.53  E-value=0.014  Score=51.62  Aligned_cols=94  Identities=14%  Similarity=0.069  Sum_probs=53.2

Q ss_pred             CcEEEEcCCChhhHHHHH-HHHhCCC---eEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecccc
Q 019878            1 MKILVSGASGYLGGRLCH-ALLKQGH---SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~-~L~~~g~---~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~   76 (334)
                      |||.|.||+|++|+.+++ .|.++++   .++.+..+. ....+....+......|..+++.    ++++|+|+-+.+. 
T Consensus         2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s-~G~~v~~~~g~~i~~~~~~~~~~----~~~~DvVf~a~g~-   75 (367)
T 1t4b_A            2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ-LGQAAPSFGGTTGTLQDAFDLEA----LKALDIIVTCQGG-   75 (367)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBCCGGGTCCCBCEETTCHHH----HHTCSEEEECSCH-
T ss_pred             cEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCC-CCCCccccCCCceEEEecCChHH----hcCCCEEEECCCc-
Confidence            489999999999999999 4554543   445554432 21122100011122223334443    3589999988763 


Q ss_pred             CCCCCCcccchhhhhHHHHHHHHHHHhcCCCc-EEEEeccc
Q 019878           77 EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVE-KIIYTSSF  116 (334)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~Ss~  116 (334)
                                     ..+...+..+.+. +++ .+|=.||.
T Consensus        76 ---------------~~s~~~a~~~~~~-G~k~vVID~ss~  100 (367)
T 1t4b_A           76 ---------------DYTNEIYPKLRES-GWQGYWIDAASS  100 (367)
T ss_dssp             ---------------HHHHHHHHHHHHT-TCCCEEEECSST
T ss_pred             ---------------hhHHHHHHHHHHC-CCCEEEEcCChh
Confidence                           1234556666666 553 56656654

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=96.52  E-value=0.00086  Score=57.95  Aligned_cols=65  Identities=23%  Similarity=0.283  Sum_probs=47.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |||.|.| .|.+|+.+++.|++.|++|++.+|++++...+... ++..       ..++.++++++|+||-+..
T Consensus        10 ~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~-g~~~-------~~~~~e~~~~aDvVi~~vp   74 (306)
T 3l6d_A           10 FDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAA-GAHL-------CESVKAALSASPATIFVLL   74 (306)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH-TCEE-------CSSHHHHHHHSSEEEECCS
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC-CCee-------cCCHHHHHhcCCEEEEEeC
Confidence            5799998 89999999999999999999999987654322211 2221       2345666778999997764

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=96.52  E-value=0.0037  Score=54.61  Aligned_cols=91  Identities=18%  Similarity=0.208  Sum_probs=55.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC---CeEEEEEcCCCCCCC--CCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG---HSVRALVRRTSDISG--LPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~--~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      |||.|.||||++|+.+++.|.+++   .+++++.........  +.. ..+.+.  |+ +++    .+.++|+|+-+.+.
T Consensus         4 ~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~~-~~i~~~--~~-~~~----~~~~vDvVf~a~g~   75 (336)
T 2r00_A            4 FNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFNG-KTVRVQ--NV-EEF----DWSQVHIALFSAGG   75 (336)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEETT-EEEEEE--EG-GGC----CGGGCSEEEECSCH
T ss_pred             cEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeecC-ceeEEe--cC-ChH----HhcCCCEEEECCCc
Confidence            579999999999999999999873   466666532211111  111 022222  21 111    33579999988763


Q ss_pred             cCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccc
Q 019878           76 VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF  117 (334)
Q Consensus        76 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~  117 (334)
                      .                .+...+..+.+. ++ ++|-.|+..
T Consensus        76 ~----------------~s~~~a~~~~~~-G~-~vId~s~~~   99 (336)
T 2r00_A           76 E----------------LSAKWAPIAAEA-GV-VVIDNTSHF   99 (336)
T ss_dssp             H----------------HHHHHHHHHHHT-TC-EEEECSSTT
T ss_pred             h----------------HHHHHHHHHHHc-CC-EEEEcCCcc
Confidence            1                134556666665 44 788888764

>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*

Probab=96.52  E-value=0.0006  Score=61.33  Aligned_cols=35  Identities=37%  Similarity=0.414  Sum_probs=31.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~   37 (334)
                      |||.|.| +|++|..++..|++ |++|++++|++++.
T Consensus         1 MkI~VIG-~G~vG~~~A~~La~-G~~V~~~d~~~~~~   35 (402)
T 1dlj_A            1 MKIAVAG-SGYVGLSLGVLLSL-QNEVTIVDILPSKV   35 (402)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTT-TSEEEEECSCHHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHhC-CCEEEEEECCHHHH
Confidence            8999998 69999999999999 99999999986543

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=96.51  E-value=0.0042  Score=50.37  Aligned_cols=34  Identities=26%  Similarity=0.440  Sum_probs=31.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~   35 (334)
                      |+|.|.| +|.+|+.+++.|.+.|++|++.+|+++
T Consensus        20 ~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~   53 (209)
T 2raf_A           20 MEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ   53 (209)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            7899999 899999999999999999999988753

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=96.50  E-value=0.0046  Score=54.48  Aligned_cols=32  Identities=31%  Similarity=0.447  Sum_probs=27.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcC
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRR   33 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~   33 (334)
                      ||.|.||+|++|+.+++.|.+.+ .+|+++.++
T Consensus        10 kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s   42 (354)
T 1ys4_A           10 KVGVLGATGSVGQRFVQLLADHPMFELTALAAS   42 (354)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTCSSEEEEEEEEC
T ss_pred             eEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcc
Confidence            79999999999999999998764 578878654

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=96.50  E-value=0.00088  Score=57.78  Aligned_cols=73  Identities=11%  Similarity=0.215  Sum_probs=50.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCC---CCCCCCC----CCCeEEEEcCCCChhhHHHHhcCCCEEEEec
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTS---DISGLPS----EGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~---~~~~~~~----~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a   73 (334)
                      ++||+|+ |..|++++..|.+.|. +|+++.|+.+   +...+.+    ..+......++.+.+.+.+.+.++|+|||+-
T Consensus       150 ~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiIINaT  228 (312)
T 3t4e_A          150 TMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADILTNGT  228 (312)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEEEECS
T ss_pred             EEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEEEECC
Confidence            6899996 8999999999999997 8999999833   2221110    0012233345556544566778899999997


Q ss_pred             cc
Q 019878           74 AL   75 (334)
Q Consensus        74 ~~   75 (334)
                      +.
T Consensus       229 p~  230 (312)
T 3t4e_A          229 KV  230 (312)
T ss_dssp             ST
T ss_pred             cC
Confidence            65

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=96.49  E-value=0.0023  Score=56.95  Aligned_cols=71  Identities=15%  Similarity=0.049  Sum_probs=46.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHh--cCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC--FGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~--~~~d~vih~a~~   75 (334)
                      +|||+||+|.+|...++.+...|.+|+++++ +++.+.+.+. +...+ .|..+.+....+.  .++|+||+++|.
T Consensus       186 ~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~~~~l-Ga~~v-~~~~~~~~~~~~~~~~g~D~vid~~g~  258 (375)
T 2vn8_A          186 RVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASELVRKL-GADDV-IDYKSGSVEEQLKSLKPFDFILDNVGG  258 (375)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHHHHHT-TCSEE-EETTSSCHHHHHHTSCCBSEEEESSCT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHHHHHc-CCCEE-EECCchHHHHHHhhcCCCCEEEECCCC
Confidence            5999999999999999999999999998874 3332222111 22221 2444433222232  469999999983

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=96.49  E-value=0.0088  Score=53.19  Aligned_cols=68  Identities=25%  Similarity=0.209  Sum_probs=52.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEe
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHT   72 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~   72 (334)
                      +||||+|+ |.+|..+++.|.+.|+++++++.++..... ..  .-.++..|..|.+.+.+++.++|+|+..
T Consensus         2 ~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~-~~--~~~~~~~~~~d~~~l~~~~~~~d~v~~~   69 (380)
T 3ax6_A            2 KKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSPAG-QV--ADEQIVAGFFDSERIEDLVKGSDVTTYD   69 (380)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTG-GG--SSEEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchh-hh--CceEEECCCCCHHHHHHHHhcCCEEEec
Confidence            26999995 899999999999999999999876543211 10  1245678999999998888889998753

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=96.48  E-value=0.0007  Score=59.60  Aligned_cols=71  Identities=14%  Similarity=0.115  Sum_probs=47.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCC--hhhHHHHh-cCCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTD--YRSLVDAC-FGCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d--~~~~~~~~-~~~d~vih~a~   74 (334)
                      +|||+||+|.+|...++.+...|.+|+++++++++.+.+.+. +...+ .|..+  .+.+.+.. .++|+||+++|
T Consensus       153 ~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l-Ga~~v-i~~~~~~~~~~~~~~~~g~Dvv~d~~g  226 (346)
T 3fbg_A          153 TLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKM-GADIV-LNHKESLLNQFKTQGIELVDYVFCTFN  226 (346)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHH-TCSEE-ECTTSCHHHHHHHHTCCCEEEEEESSC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc-CCcEE-EECCccHHHHHHHhCCCCccEEEECCC
Confidence            599999999999999999999999999999876543322211 12211 13222  12233331 24999999987

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=96.48  E-value=7.7e-05  Score=63.98  Aligned_cols=71  Identities=14%  Similarity=0.092  Sum_probs=46.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC-CC----eEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-GA----LELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~----v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      ++++|||++ .+|+++++.|++.| +|++.+|+.++...+... ..    ...+.+|+.+.   .+.+.++|+|||+++.
T Consensus       129 k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~---~~~~~~~DilVn~ag~  203 (287)
T 1nvt_A          129 KNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL---DVDLDGVDIIINATPI  203 (287)
T ss_dssp             CEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT---TCCCTTCCEEEECSCT
T ss_pred             CEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH---HHhhCCCCEEEECCCC
Confidence            369999975 99999999999999 999999986543222110 00    00011233331   3445679999999986


Q ss_pred             c
Q 019878           76 V   76 (334)
Q Consensus        76 ~   76 (334)
                      .
T Consensus       204 ~  204 (287)
T 1nvt_A          204 G  204 (287)
T ss_dssp             T
T ss_pred             C
Confidence            3

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.47  E-value=0.00064  Score=57.92  Aligned_cols=70  Identities=21%  Similarity=0.291  Sum_probs=49.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCC-----CCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSE-----GALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~-----~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      +++|+|+ |.+|++++..|.+.|. +|++++|+.++...+...     +.++....++   +++.+.+.++|+|||+-+.
T Consensus       129 ~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~---~~l~~~l~~~DiVInaTp~  204 (283)
T 3jyo_A          129 SVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDA---RGIEDVIAAADGVVNATPM  204 (283)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECS---TTHHHHHHHSSEEEECSST
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCH---HHHHHHHhcCCEEEECCCC
Confidence            6999996 8999999999999997 799999987654322110     0122323333   3456677789999999864

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=96.47  E-value=0.00077  Score=59.53  Aligned_cols=74  Identities=20%  Similarity=0.095  Sum_probs=48.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEE------cCC-CChhhHHHHhcCCCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVY------GDV-TDYRSLVDACFGCHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~------~Dl-~d~~~~~~~~~~~d~vih~a   73 (334)
                      |||+|.| +|.+|+.++..|.+.|++|++++|++++.+.+.....+....      ..+ ....++.+++.++|+||-+.
T Consensus         5 mki~iiG-~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v   83 (359)
T 1bg6_A            5 KTYAVLG-LGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVV   83 (359)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECS
T ss_pred             CeEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEeC
Confidence            6899999 599999999999999999999999765432221110111110      011 01223456677899999887


Q ss_pred             cc
Q 019878           74 AL   75 (334)
Q Consensus        74 ~~   75 (334)
                      ..
T Consensus        84 ~~   85 (359)
T 1bg6_A           84 PA   85 (359)
T ss_dssp             CG
T ss_pred             Cc
Confidence            53

>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*

Probab=96.46  E-value=0.015  Score=51.34  Aligned_cols=70  Identities=16%  Similarity=0.083  Sum_probs=50.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCC-CChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDV-TDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl-~d~~~~~~~~~~~d~vih~a~   74 (334)
                      .||+|+| +|..|..+++.+.+.|++|++++.++.....--   --+++..|. .|.+.+....+++|+|+-..+
T Consensus         2 K~I~ilG-gg~~g~~~~~~Ak~~G~~vv~vd~~~~~~~~~~---aD~~~~~~~~~d~~~~~~~~~~~D~v~~~~~   72 (363)
T 4ffl_A            2 KTICLVG-GKLQGFEAAYLSKKAGMKVVLVDKNPQALIRNY---ADEFYCFDVIKEPEKLLELSKRVDAVLPVNE   72 (363)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTT---SSEEEECCTTTCHHHHHHHHTSSSEEEECCC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCChhHhh---CCEEEECCCCcCHHHHHHHhcCCCEEEECCC
Confidence            1499998 689999999999999999999988765432211   124555665 466667777788998875443

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=96.45  E-value=0.013  Score=52.38  Aligned_cols=65  Identities=17%  Similarity=0.132  Sum_probs=51.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIF   70 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   70 (334)
                      +|+|+| +|.+|..+++.+.+.|++|++++..+.......   .-..+..|..|.+.+.++++++|+|.
T Consensus        16 ~IlIlG-~G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~---ad~~~~~~~~d~~~l~~~~~~~dvI~   80 (389)
T 3q2o_A           16 TIGIIG-GGQLGRMMALAAKEMGYKIAVLDPTKNSPCAQV---ADIEIVASYDDLKAIQHLAEISDVVT   80 (389)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSTTCTTTTT---CSEEEECCTTCHHHHHHHHHTCSEEE
T ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCEEEEEeCCCCCchHHh---CCceEecCcCCHHHHHHHHHhCCEee
Confidence            699998 788999999999999999999987654322111   12456689999999999999999874

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=96.45  E-value=0.00056  Score=56.07  Aligned_cols=65  Identities=11%  Similarity=0.133  Sum_probs=45.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEE-EEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRA-LVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a   73 (334)
                      |||.|.| +|.+|+.+++.|.+.|++|++ .+|++++...+...-++....    +   ..+.++++|+||-+.
T Consensus        24 mkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~----~---~~~~~~~aDvVilav   89 (220)
T 4huj_A           24 TTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKA----V---ELKDALQADVVILAV   89 (220)
T ss_dssp             CCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEE----C---CHHHHTTSSEEEEES
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCccc----C---hHHHHhcCCEEEEeC
Confidence            6899999 999999999999999999999 788776543321100111111    1   123467899999775

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=96.45  E-value=0.0061  Score=54.75  Aligned_cols=66  Identities=20%  Similarity=0.234  Sum_probs=52.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC-CCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-GLPSEGALELVYGDVTDYRSLVDACFGCHVIFH   71 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih   71 (334)
                      ||+|+| .|.+|..+++.+.+.|++|++++ .+.... .+..  ....+.+|..|.+.+.++.+.+|+|+-
T Consensus        26 ~I~ilG-gG~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~ad--~~~~~~~~~~d~~~l~~~a~~~d~i~~   92 (403)
T 3k5i_A           26 KVGVLG-GGQLGRMLVESANRLNIQVNVLD-ADNSPAKQISA--HDGHVTGSFKEREAVRQLAKTCDVVTA   92 (403)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGCC--SSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhcc--ccceeecCCCCHHHHHHHHHhCCEEEE
Confidence            799999 58999999999999999999999 543221 1211  224577899999999999999998764

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=96.43  E-value=0.012  Score=51.37  Aligned_cols=60  Identities=28%  Similarity=0.166  Sum_probs=46.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |+|.|.| .|-||+.+++.|...|.+|++.+|++....      ....       ..++.++++++|+|+-+..
T Consensus       172 ktiGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~------~~~~-------~~sl~ell~~aDvVil~vP  231 (340)
T 4dgs_A          172 KRIGVLG-LGQIGRALASRAEAFGMSVRYWNRSTLSGV------DWIA-------HQSPVDLARDSDVLAVCVA  231 (340)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCTTS------CCEE-------CSSHHHHHHTCSEEEECC-
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCccccc------Ccee-------cCCHHHHHhcCCEEEEeCC
Confidence            5799999 799999999999999999999999876421      1221       2346778889999998765

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.42  E-value=0.00086  Score=58.06  Aligned_cols=65  Identities=22%  Similarity=0.290  Sum_probs=48.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |||.|.| +|.+|..+++.|++.|++|++.+|++++...+... ++..       ..+..++++++|+||-+..
T Consensus        22 ~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~-g~~~-------~~~~~~~~~~aDvvi~~vp   86 (310)
T 3doj_A           22 MEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEH-GASV-------CESPAEVIKKCKYTIAMLS   86 (310)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHT-TCEE-------CSSHHHHHHHCSEEEECCS
T ss_pred             CEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC-CCeE-------cCCHHHHHHhCCEEEEEcC
Confidence            6899998 89999999999999999999999998765433221 2221       2345566777899997753

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=96.42  E-value=0.007  Score=51.34  Aligned_cols=91  Identities=19%  Similarity=0.162  Sum_probs=53.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC-CCeEEEE-EcCCCCCC--CCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRAL-VRRTSDIS--GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~--~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~   76 (334)
                      |||.|.|++|-+|+.+++.+.+. +.+++++ +|+.+...  ...+..++.  ..++.-.+++.+++.++|+||.+... 
T Consensus        22 irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~--~~gv~v~~dl~~ll~~aDVvIDFT~p-   98 (288)
T 3ijp_A           22 MRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSD--FLGVRITDDPESAFSNTEGILDFSQP-   98 (288)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCS--CCSCBCBSCHHHHTTSCSEEEECSCH-
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccC--cCCceeeCCHHHHhcCCCEEEEcCCH-
Confidence            47999999999999999999864 5676666 44432211  000000000  11222223466677899999988632 


Q ss_pred             CCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEE
Q 019878           77 EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKII  111 (334)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v  111 (334)
                                     ..+...++.|.++ ++ .+|
T Consensus        99 ---------------~a~~~~~~~~l~~-Gv-~vV  116 (288)
T 3ijp_A           99 ---------------QASVLYANYAAQK-SL-IHI  116 (288)
T ss_dssp             ---------------HHHHHHHHHHHHH-TC-EEE
T ss_pred             ---------------HHHHHHHHHHHHc-CC-CEE
Confidence                           2334556677776 33 444

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=96.40  E-value=0.0054  Score=53.97  Aligned_cols=69  Identities=19%  Similarity=0.102  Sum_probs=47.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCe-EEEEcCCCC----hhhHHHHhc-----CCCEEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGAL-ELVYGDVTD----YRSLVDACF-----GCHVIFH   71 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v-~~~~~Dl~d----~~~~~~~~~-----~~d~vih   71 (334)
                      +|||+|+ |.+|...++.+...|.+|+++++++++.+.+.+. +. ..+  |..+    .+.+.+...     ++|+||+
T Consensus       171 ~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l-Ga~~~~--~~~~~~~~~~~i~~~~~~~~g~g~D~vid  246 (352)
T 1e3j_A          171 TVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNC-GADVTL--VVDPAKEEESSIIERIRSAIGDLPNVTID  246 (352)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT-TCSEEE--ECCTTTSCHHHHHHHHHHHSSSCCSEEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHh-CCCEEE--cCcccccHHHHHHHHhccccCCCCCEEEE
Confidence            5999996 9999999999999999999998876543322211 22 222  3332    334444443     5999999


Q ss_pred             ecc
Q 019878           72 TAA   74 (334)
Q Consensus        72 ~a~   74 (334)
                      ++|
T Consensus       247 ~~g  249 (352)
T 1e3j_A          247 CSG  249 (352)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            987

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=96.38  E-value=0.0023  Score=54.79  Aligned_cols=64  Identities=19%  Similarity=0.214  Sum_probs=46.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |||.|.| +|.+|+.+++.|.+.|++|++.+ ++++...+... ++       ....++.++++++|+||-+..
T Consensus         4 m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~-g~-------~~~~~~~~~~~~~D~vi~~vp   67 (295)
T 1yb4_A            4 MKLGFIG-LGIMGSPMAINLARAGHQLHVTT-IGPVADELLSL-GA-------VNVETARQVTEFADIIFIMVP   67 (295)
T ss_dssp             CEEEECC-CSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTT-TC-------BCCSSHHHHHHTCSEEEECCS
T ss_pred             CEEEEEc-cCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHc-CC-------cccCCHHHHHhcCCEEEEECC
Confidence            6899998 89999999999999999999888 66554333221 21       112335566778999998764

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=96.37  E-value=0.01  Score=51.03  Aligned_cols=105  Identities=20%  Similarity=0.157  Sum_probs=69.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC--eEEEEEcCCCCCCCCC-----CCCCeEEEEcCCCChhhHHHHhcCCCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a   73 (334)
                      |||.|+|+ |.+|..++..|+.+|.  +|..++++++......     ..++++.. .|      + +.++++|+||-.+
T Consensus        15 ~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~t-~d------~-~~l~~aD~Vi~aa   85 (303)
T 2i6t_A           15 NKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEIS-KD------L-SASAHSKVVIFTV   85 (303)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEEE-SC------G-GGGTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEEe-CC------H-HHHCCCCEEEEcC
Confidence            57999995 9999999999999887  9999999874111000     00133331 22      2 4578999999999


Q ss_pred             cccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecc
Q 019878           74 ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (334)
Q Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss  115 (334)
                      +...+. .........|+.-.+.+++.+.++..-..++.+|-
T Consensus        86 g~~~pG-~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sN  126 (303)
T 2i6t_A           86 NSLGSS-QSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQ  126 (303)
T ss_dssp             CC-----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSS
T ss_pred             CCCCCC-CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCC
Confidence            874221 22334667899999999999988743345666663

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=96.36  E-value=0.0049  Score=51.08  Aligned_cols=33  Identities=27%  Similarity=0.477  Sum_probs=27.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEE-EEcCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRA-LVRRT   34 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~-~~r~~   34 (334)
                      |||.|+|+ |.+|+.+++.+.++++++++ ++++.
T Consensus         4 mkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~~   37 (243)
T 3qy9_A            4 MKILLIGY-GAMNQRVARLAEEKGHEIVGVIENTP   37 (243)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSC
T ss_pred             eEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecCc
Confidence            58999999 99999999999988777666 45544

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.36  E-value=0.00055  Score=58.86  Aligned_cols=65  Identities=25%  Similarity=0.306  Sum_probs=46.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |+|.|.| +|.+|+.+++.|.+.|++|.+.+|++++...+... ++..       ..++.++++++|+||-+..
T Consensus         6 m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~~-------~~~~~~~~~~~D~vi~~v~   70 (299)
T 1vpd_A            6 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAA-GAET-------ASTAKAIAEQCDVIITMLP   70 (299)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TCEE-------CSSHHHHHHHCSEEEECCS
T ss_pred             ceEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHC-CCee-------cCCHHHHHhCCCEEEEECC
Confidence            6899999 89999999999999999999999886543322211 2221       1224455667999998864

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=96.33  E-value=0.0016  Score=57.03  Aligned_cols=70  Identities=19%  Similarity=0.103  Sum_probs=48.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChh---hHHHHhcCCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYR---SLVDACFGCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~---~~~~~~~~~d~vih~a~   74 (334)
                      +|||+|+ |.+|..+++.+...|.+|+++++++.+.+.+.+. +...+ .|..+.+   .+.+...++|+||+++|
T Consensus       167 ~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l-Ga~~~-~d~~~~~~~~~~~~~~~~~d~vid~~g  239 (339)
T 1rjw_A          167 WVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKEL-GADLV-VNPLKEDAAKFMKEKVGGVHAAVVTAV  239 (339)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TCSEE-ECTTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHC-CCCEE-ecCCCccHHHHHHHHhCCCCEEEECCC
Confidence            6999999 7799999999999999999999876543322211 22222 3555432   23333357999999987

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=96.32  E-value=0.00055  Score=60.76  Aligned_cols=69  Identities=22%  Similarity=0.276  Sum_probs=47.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCC---CCCCCCCCCCCeEEEEcCCCC--hhhHHHHhcCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT---SDISGLPSEGALELVYGDVTD--YRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~---~~~~~~~~~~~v~~~~~Dl~d--~~~~~~~~~~~d~vih~a~~   75 (334)
                      +|||+|+ |.+|..+++.+...|.+|+++++++   ++.+.+.+. ++..+  | .+  .+.+.+.-.++|+||+++|.
T Consensus       183 ~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~-ga~~v--~-~~~~~~~~~~~~~~~d~vid~~g~  256 (366)
T 2cdc_A          183 KVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEET-KTNYY--N-SSNGYDKLKDSVGKFDVIIDATGA  256 (366)
T ss_dssp             EEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHH-TCEEE--E-CTTCSHHHHHHHCCEEEEEECCCC
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHh-CCcee--c-hHHHHHHHHHhCCCCCEEEECCCC
Confidence            5999999 9999999999999999999999987   443221111 34444  4 43  12233212469999999983

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=96.31  E-value=0.021  Score=42.77  Aligned_cols=84  Identities=25%  Similarity=0.296  Sum_probs=54.8

Q ss_pred             cEEEEcCC---ChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCC
Q 019878            2 KILVSGAS---GYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (334)
Q Consensus         2 ~ilItG~t---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~   78 (334)
                      +|.|.|++   |.+|..+++.|++.|++|+.++.+.+..      .++.       -..++.++.+.+|+++-+...   
T Consensus        16 ~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i------~G~~-------~~~s~~el~~~vDlvii~vp~---   79 (138)
T 1y81_A           16 KIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI------EGLK-------CYRSVRELPKDVDVIVFVVPP---   79 (138)
T ss_dssp             EEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE------TTEE-------CBSSGGGSCTTCCEEEECSCH---
T ss_pred             eEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE------CCee-------ecCCHHHhCCCCCEEEEEeCH---
Confidence            68999987   8999999999999999877766553221      1233       222333444578988866431   


Q ss_pred             CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecc
Q 019878           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (334)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss  115 (334)
                                   .....+++.|.+. +++.++..++
T Consensus        80 -------------~~v~~v~~~~~~~-g~~~i~~~~~  102 (138)
T 1y81_A           80 -------------KVGLQVAKEAVEA-GFKKLWFQPG  102 (138)
T ss_dssp             -------------HHHHHHHHHHHHT-TCCEEEECTT
T ss_pred             -------------HHHHHHHHHHHHc-CCCEEEEcCc
Confidence                         2335666667775 6777766654

>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}

Probab=96.30  E-value=0.0018  Score=58.38  Aligned_cols=35  Identities=26%  Similarity=0.284  Sum_probs=31.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~   37 (334)
                      +|.|.| +|++|..++..|++.|++|++++.++.+.
T Consensus        23 ~IaViG-lGYVGLp~A~~~A~~G~~V~g~Did~~kV   57 (444)
T 3vtf_A           23 SLSVLG-LGYVGVVHAVGFALLGHRVVGYDVNPSIV   57 (444)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHH
T ss_pred             EEEEEc-cCHHHHHHHHHHHhCCCcEEEEECCHHHH
Confidence            588997 99999999999999999999999887643

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.30  E-value=0.033  Score=48.34  Aligned_cols=34  Identities=29%  Similarity=0.451  Sum_probs=28.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSD   36 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~   36 (334)
                      ||+|.| +|.+|+++++.|...| -++++++++.-.
T Consensus        36 ~VlIvG-aGGlGs~va~~La~aGVg~ItlvD~D~Ve   70 (340)
T 3rui_A           36 KVLLLG-AGTLGCYVSRALIAWGVRKITFVDNGTVS   70 (340)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCCBCC
T ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCCEEEEecCCEec
Confidence            699999 7999999999999999 478888876543

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=96.30  E-value=0.019  Score=50.34  Aligned_cols=100  Identities=14%  Similarity=0.138  Sum_probs=65.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCC------------------------C--CeEEEEcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSE------------------------G--ALELVYGDVT   54 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~------------------------~--~v~~~~~Dl~   54 (334)
                      +|+|.| .|.+|+.+++.|...|. ++++++.+.-...++..+                        +  .++.+..++.
T Consensus        38 ~VlivG-~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~~~~~~  116 (346)
T 1y8q_A           38 RVLLVG-LKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDTEDIE  116 (346)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEECSCGG
T ss_pred             eEEEEC-CCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEEecccC
Confidence            699999 68899999999999995 788887653222221110                        2  2445555544


Q ss_pred             ChhhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceecc
Q 019878           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS  121 (334)
Q Consensus        55 d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~  121 (334)
                      +  ...+.+.++|+||.+..               |...-..+-++|.+. + ..+|..++.+.+|.
T Consensus       117 ~--~~~~~~~~~dvVv~~~d---------------~~~~r~~ln~~~~~~-~-ip~i~~~~~G~~G~  164 (346)
T 1y8q_A          117 K--KPESFFTQFDAVCLTCC---------------SRDVIVKVDQICHKN-S-IKFFTGDVFGYHGY  164 (346)
T ss_dssp             G--CCHHHHTTCSEEEEESC---------------CHHHHHHHHHHHHHT-T-CEEEEEEEEBTEEE
T ss_pred             c--chHHHhcCCCEEEEcCC---------------CHHHHHHHHHHHHHc-C-CCEEEEeecccEEE
Confidence            3  23456678898887632               333445677778876 3 48888887777664

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=96.29  E-value=0.0013  Score=60.25  Aligned_cols=36  Identities=28%  Similarity=0.345  Sum_probs=32.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~   37 (334)
                      +|||+|++|.+|...++.+...|.+|+++++++.+.
T Consensus       231 ~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~  266 (456)
T 3krt_A          231 NVLIWGASGGLGSYATQFALAGGANPICVVSSPQKA  266 (456)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHH
Confidence            599999999999999999999999999999876543

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.29  E-value=0.015  Score=51.04  Aligned_cols=95  Identities=14%  Similarity=0.188  Sum_probs=61.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCC------------------------C--CeEEEEcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSE------------------------G--ALELVYGDVT   54 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~------------------------~--~v~~~~~Dl~   54 (334)
                      +|+|.| +|.+|+.+++.|...| -++++++++.-...++..+                        +  .++.+..++.
T Consensus       120 ~VlvvG-~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~i~  198 (353)
T 3h5n_A          120 KVVILG-CGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIALNIN  198 (353)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEECCCC
T ss_pred             eEEEEC-CCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEeecccC
Confidence            699999 5889999999999998 4788888765322222111                        1  3566666776


Q ss_pred             ChhhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhH-HHHHHHHHHHhcCCCcEEEEecc
Q 019878           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVE-GLKNVVQAAKETKTVEKIIYTSS  115 (334)
Q Consensus        55 d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~-~~~~l~~~~~~~~~~~~~v~~Ss  115 (334)
                      +...+.+ +.++|+||.+.-               |.. .-..+-++|.+. + +.+|+.+.
T Consensus       199 ~~~~~~~-~~~~DlVvd~~D---------------n~~~~r~~ln~~c~~~-~-~p~i~~~~  242 (353)
T 3h5n_A          199 DYTDLHK-VPEADIWVVSAD---------------HPFNLINWVNKYCVRA-N-QPYINAGY  242 (353)
T ss_dssp             SGGGGGG-SCCCSEEEECCC---------------CSTTHHHHHHHHHHHT-T-CCEEEEEE
T ss_pred             chhhhhH-hccCCEEEEecC---------------ChHHHHHHHHHHHHHh-C-CCEEEEEE
Confidence            6554555 788999998752               111 123455677776 4 36776654

>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6

Probab=96.26  E-value=0.0008  Score=58.83  Aligned_cols=73  Identities=18%  Similarity=0.230  Sum_probs=47.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEc--CCCCCCCCCCCC-----CeEEEEcCCCChhhHHHHhcCCCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVR--RTSDISGLPSEG-----ALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r--~~~~~~~~~~~~-----~v~~~~~Dl~d~~~~~~~~~~~d~vih~a   73 (334)
                      |||.|.| +|.+|+.++..|.+.|++|++++|  ++++.+.+....     ++++......+.++..++++++|+||-+.
T Consensus         1 m~I~iiG-~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v   79 (335)
T 1txg_A            1 MIVSILG-AGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV   79 (335)
T ss_dssp             CEEEEES-CCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcC
Confidence            8999999 699999999999999999999999  654322111110     11100001122234566778899999876


Q ss_pred             c
Q 019878           74 A   74 (334)
Q Consensus        74 ~   74 (334)
                      .
T Consensus        80 ~   80 (335)
T 1txg_A           80 S   80 (335)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.26  E-value=0.0013  Score=58.25  Aligned_cols=71  Identities=11%  Similarity=-0.040  Sum_probs=49.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCCh-hhHHHHhcCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY-RSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~-~~~~~~~~~~d~vih~a~~   75 (334)
                      +|||+|+ |.+|...++.+...|.+|+++++++.+.+.+.+. +...+ .|..+. +....+..++|+||+++|.
T Consensus       182 ~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~l-Ga~~v-~~~~~~~~~~~~~~~~~D~vid~~g~  253 (360)
T 1piw_A          182 KVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKM-GADHY-IATLEEGDWGEKYFDTFDLIVVCASS  253 (360)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH-TCSEE-EEGGGTSCHHHHSCSCEEEEEECCSC
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHc-CCCEE-EcCcCchHHHHHhhcCCCEEEECCCC
Confidence            6999999 9999999999998999999999988764332221 12221 244333 3233333579999999874

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.25  E-value=0.0011  Score=56.33  Aligned_cols=67  Identities=27%  Similarity=0.251  Sum_probs=48.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      |+|+|.| +|.+|+++++.|.+.|.+|++.+|++++...+...-++..  .+     ++.+.++++|+||++...
T Consensus       130 ~~v~iiG-aG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~--~~-----~~~~~~~~aDiVi~atp~  196 (275)
T 2hk9_A          130 KSILVLG-AGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEV--VN-----SPEEVIDKVQVIVNTTSV  196 (275)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEE--CS-----CGGGTGGGCSEEEECSST
T ss_pred             CEEEEEC-chHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCee--eh-----hHHhhhcCCCEEEEeCCC
Confidence            5799999 5899999999999999999999998654333322112322  11     234566789999999875

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=96.24  E-value=0.00038  Score=59.07  Aligned_cols=67  Identities=16%  Similarity=0.205  Sum_probs=45.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC----CCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE----GALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      ++++|+|+ |.+|++++..|++.|.+|++.+|+.++...+...    ..+..  .|+   +++.+  .++|+||++++.
T Consensus       120 ~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~--~~~---~~~~~--~~~DivIn~t~~  190 (272)
T 1p77_A          120 QHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQA--VSM---DSIPL--QTYDLVINATSA  190 (272)
T ss_dssp             CEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEE--EEG---GGCCC--SCCSEEEECCCC
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEE--eeH---HHhcc--CCCCEEEECCCC
Confidence            47999997 7899999999999999999999987543322110    01221  232   11111  379999999986

>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}

Probab=96.24  E-value=0.011  Score=51.25  Aligned_cols=64  Identities=19%  Similarity=0.290  Sum_probs=49.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      ++|.|.| .|-||+.+++.|...|.+|++.+|++.......     ..     ....++.++++++|+|+.+...
T Consensus       141 ~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~-----~~-----~~~~~l~ell~~aDvV~l~lPl  204 (324)
T 3hg7_A          141 RTLLILG-TGSIGQHIAHTGKHFGMKVLGVSRSGRERAGFD-----QV-----YQLPALNKMLAQADVIVSVLPA  204 (324)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCTTCS-----EE-----ECGGGHHHHHHTCSEEEECCCC
T ss_pred             ceEEEEE-ECHHHHHHHHHHHhCCCEEEEEcCChHHhhhhh-----cc-----cccCCHHHHHhhCCEEEEeCCC
Confidence            5789999 999999999999999999999999875433211     11     1245678889999999988764

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=96.23  E-value=0.0038  Score=56.40  Aligned_cols=65  Identities=22%  Similarity=0.235  Sum_probs=51.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIF   70 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   70 (334)
                      ||+|+| .|.+|+.+++.+.+.|++|++++..+.......   .-.++..|..|.+.+.++.+++|+|+
T Consensus        37 ~IlIlG-~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~---ad~~~~~~~~d~~~l~~~a~~~D~V~  101 (419)
T 4e4t_A           37 WLGMVG-GGQLGRMFCFAAQSMGYRVAVLDPDPASPAGAV---ADRHLRAAYDDEAALAELAGLCEAVS  101 (419)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCTTCHHHHH---SSEEECCCTTCHHHHHHHHHHCSEEE
T ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCEEEEECCCCcCchhhh---CCEEEECCcCCHHHHHHHHhcCCEEE
Confidence            699998 689999999999999999999876543211100   12466789999999999998899988

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.23  E-value=0.0018  Score=57.19  Aligned_cols=71  Identities=11%  Similarity=0.028  Sum_probs=50.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-CCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-SEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      +|||+|+ |.+|...++.+...|.+|+++++++++.+.+. +. +...+ .|..+.+.+.++..++|+||+++|.
T Consensus       183 ~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~l-Ga~~v-i~~~~~~~~~~~~~g~D~vid~~g~  254 (357)
T 2cf5_A          183 RGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDL-GADDY-VIGSDQAKMSELADSLDYVIDTVPV  254 (357)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTS-CCSCE-EETTCHHHHHHSTTTEEEEEECCCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHc-CCcee-eccccHHHHHHhcCCCCEEEECCCC
Confidence            5999995 99999999999989999999999876533221 11 22211 2445555666665679999999974

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=96.22  E-value=0.00083  Score=57.45  Aligned_cols=65  Identities=20%  Similarity=0.334  Sum_probs=48.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |||.|.| +|.+|+.+++.|++.|++|++.+|++++.+.+... ++..       ..+..++++++|+||-+..
T Consensus         2 ~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-g~~~-------~~~~~~~~~~advvi~~v~   66 (287)
T 3pdu_A            2 TTYGFLG-LGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVAL-GARQ-------ASSPAEVCAACDITIAMLA   66 (287)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHH-TCEE-------CSCHHHHHHHCSEEEECCS
T ss_pred             CeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-CCee-------cCCHHHHHHcCCEEEEEcC
Confidence            5799998 89999999999999999999999998765433221 2221       2235566677899997764

>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A

Probab=96.21  E-value=0.0014  Score=60.20  Aligned_cols=72  Identities=22%  Similarity=0.309  Sum_probs=47.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC--CCeEEEEEcCCCCCCCCCCCCCeEEEE------------cCCCChhhHHHHhcCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ--GHSVRALVRRTSDISGLPSEGALELVY------------GDVTDYRSLVDACFGC   66 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~v~~~~------------~Dl~d~~~~~~~~~~~   66 (334)
                      |||.|.| +|.+|..++..|++.  |++|++++|++++.+.+... ...+..            ..+.-..++.++++++
T Consensus         6 mkI~VIG-~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g-~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~a   83 (467)
T 2q3e_A            6 KKICCIG-AGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSP-TLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEA   83 (467)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSS-SCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHC
T ss_pred             cEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCC-CCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcC
Confidence            6899998 899999999999998  89999999986543322210 000000            0111112234566789


Q ss_pred             CEEEEecc
Q 019878           67 HVIFHTAA   74 (334)
Q Consensus        67 d~vih~a~   74 (334)
                      |+||-+..
T Consensus        84 DvViiaVp   91 (467)
T 2q3e_A           84 DLVFISVN   91 (467)
T ss_dssp             SEEEECCC
T ss_pred             CEEEEEcC
Confidence            99998875

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=96.21  E-value=0.0012  Score=56.61  Aligned_cols=64  Identities=17%  Similarity=0.193  Sum_probs=46.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a   73 (334)
                      |||.|.| +|.+|+.+++.|.+.|++|++.+|++++...+... ++...       .+..++++++|+||-+.
T Consensus         1 m~i~iiG-~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~~~-------~~~~~~~~~~Dvvi~~v   64 (296)
T 2gf2_A            1 MPVGFIG-LGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDA-GEQVV-------SSPADVAEKADRIITML   64 (296)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTT-TCEEC-------SSHHHHHHHCSEEEECC
T ss_pred             CeEEEEe-ccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCeec-------CCHHHHHhcCCEEEEeC
Confidence            8999998 79999999999999999999999987644332221 23221       22345566789998775

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.20  E-value=0.0019  Score=57.30  Aligned_cols=71  Identities=18%  Similarity=0.120  Sum_probs=50.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      +|||+|+ |.+|...++.+...|.+|+++++++++.+.+.+. +...+ .|..+.+.+.++..++|+||+++|.
T Consensus       197 ~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~l-Ga~~v-i~~~~~~~~~~~~~g~Dvvid~~g~  267 (369)
T 1uuf_A          197 KVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKAL-GADEV-VNSRNADEMAAHLKSFDFILNTVAA  267 (369)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH-TCSEE-EETTCHHHHHTTTTCEEEEEECCSS
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCcEE-eccccHHHHHHhhcCCCEEEECCCC
Confidence            5999997 8899999999999999999999887654322211 22221 2555555445544679999999874

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.17  E-value=0.003  Score=56.19  Aligned_cols=72  Identities=19%  Similarity=0.204  Sum_probs=51.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcC----------------CCC------hhhH
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGD----------------VTD------YRSL   59 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~D----------------l~d------~~~~   59 (334)
                      ||+|+|+ |-+|...++.+...|.+|+++++++.+...+.+. +.+++..+                +++      .+.+
T Consensus       192 kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~-G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~l  269 (405)
T 4dio_A          192 KIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVASL-GAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAALV  269 (405)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHT-TCEECCCCC-----------------CHHHHHHHHHH
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHc-CCceeecccccccccccccchhhhcchhhhhhhHhHH
Confidence            6999995 9999999999999999999999988643222111 23333222                122      2467


Q ss_pred             HHHhcCCCEEEEeccc
Q 019878           60 VDACFGCHVIFHTAAL   75 (334)
Q Consensus        60 ~~~~~~~d~vih~a~~   75 (334)
                      .+++.++|+||.++..
T Consensus       270 ~e~l~~aDVVI~tvli  285 (405)
T 4dio_A          270 AEHIAKQDIVITTALI  285 (405)
T ss_dssp             HHHHHTCSEEEECCCC
T ss_pred             HHHhcCCCEEEECCcC
Confidence            8888999999998754

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=96.17  E-value=0.001  Score=57.18  Aligned_cols=65  Identities=20%  Similarity=0.309  Sum_probs=46.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |||.|.| +|.+|+.+++.|.+.|++|++.+|++++...+... ++..       ..+..+++.++|+||-+..
T Consensus         5 ~~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~~-------~~~~~~~~~~~D~vi~~vp   69 (301)
T 3cky_A            5 IKIGFIG-LGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQ-GAQA-------CENNQKVAAASDIIFTSLP   69 (301)
T ss_dssp             CEEEEEC-CCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTT-TCEE-------CSSHHHHHHHCSEEEECCS
T ss_pred             CEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC-CCee-------cCCHHHHHhCCCEEEEECC
Confidence            6899998 79999999999999999999999876543322221 2322       1224455667899998763

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=96.15  E-value=0.02  Score=53.97  Aligned_cols=101  Identities=18%  Similarity=0.210  Sum_probs=63.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCC--------------------------CCeEEEEcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSE--------------------------GALELVYGDVT   54 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~--------------------------~~v~~~~~Dl~   54 (334)
                      +|||.| .|.+|+.+++.|+..|. ++++++.+.-...++..+                          -+++.+..++.
T Consensus        19 ~VlVVG-aGGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP~v~V~a~~~~i~   97 (640)
T 1y8q_B           19 RVLVVG-AGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKANIVAYHDSIM   97 (640)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCTTCEEEEEESCTT
T ss_pred             eEEEEC-cCHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCCCCeEEEEecccc
Confidence            699999 68899999999999984 788888754322221111                          13555666665


Q ss_pred             ChhhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceec
Q 019878           55 DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG  120 (334)
Q Consensus        55 d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~  120 (334)
                      +.......+.++|+||.+.-               |+..-..+-+.|.++ + ..+|..++.+.+|
T Consensus        98 ~~~~~~~~~~~~DlVvda~D---------------n~~aR~~ln~~c~~~-~-iPlI~~g~~G~~G  146 (640)
T 1y8q_B           98 NPDYNVEFFRQFILVMNALD---------------NRAARNHVNRMCLAA-D-VPLIESGTAGYLG  146 (640)
T ss_dssp             STTSCHHHHTTCSEEEECCS---------------CHHHHHHHHHHHHHH-T-CCEEEEEEETTEE
T ss_pred             hhhhhHhhhcCCCEEEECCC---------------CHHHHHHHHHHHHHc-C-CCEEEEEEecccc
Confidence            43322455677888887632               344445666777776 3 3577766655444

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=96.14  E-value=0.0016  Score=57.12  Aligned_cols=70  Identities=19%  Similarity=0.247  Sum_probs=46.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCCh-hhHHHHhc--CCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY-RSLVDACF--GCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~-~~~~~~~~--~~d~vih~a~   74 (334)
                      +|||+||+|.+|...++.+...|.+|+++ +++++.+.+.+. +...+. +-.+. +.+.+...  ++|+||+++|
T Consensus       153 ~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~l-Ga~~i~-~~~~~~~~~~~~~~~~g~D~vid~~g  225 (343)
T 3gaz_A          153 TVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDL-GATPID-ASREPEDYAAEHTAGQGFDLVYDTLG  225 (343)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHH-TSEEEE-TTSCHHHHHHHHHTTSCEEEEEESSC
T ss_pred             EEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHc-CCCEec-cCCCHHHHHHHHhcCCCceEEEECCC
Confidence            59999999999999999999999999998 655443222211 233332 22222 22333333  5999999987

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=96.14  E-value=0.01  Score=51.44  Aligned_cols=63  Identities=19%  Similarity=0.256  Sum_probs=48.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      ++|.|.| .|-||+.+++.|...|.+|++.+|++.....+.     ..+.     ..++.++++++|+|+.+..
T Consensus       138 ktvGIiG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~-----~~~~-----~~~l~ell~~aDvV~l~lP  200 (324)
T 3evt_A          138 QQLLIYG-TGQIGQSLAAKASALGMHVIGVNTTGHPADHFH-----ETVA-----FTATADALATANFIVNALP  200 (324)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSCCCCTTCS-----EEEE-----GGGCHHHHHHCSEEEECCC
T ss_pred             CeEEEEC-cCHHHHHHHHHHHhCCCEEEEECCCcchhHhHh-----hccc-----cCCHHHHHhhCCEEEEcCC
Confidence            4789998 899999999999999999999999876543321     1111     3456677888999997765

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=96.14  E-value=0.0045  Score=54.06  Aligned_cols=93  Identities=20%  Similarity=0.177  Sum_probs=53.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC---eEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH---SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVE   77 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~   77 (334)
                      |||.|.|+||++|+.|++.|.++.+   ++..+..+......+.- .+.....-|+.+     ..++++|+|+-+.+.. 
T Consensus         2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~~-~~~~~~~~~~~~-----~~~~~~Dvvf~a~~~~-   74 (344)
T 3tz6_A            2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLAF-RGQEIEVEDAET-----ADPSGLDIALFSAGSA-   74 (344)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEEE-TTEEEEEEETTT-----SCCTTCSEEEECSCHH-
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCceee-cCCceEEEeCCH-----HHhccCCEEEECCChH-
Confidence            6899999999999999999988743   45555432221111110 011111112111     2346799999888631 


Q ss_pred             CCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccc
Q 019878           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF  117 (334)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~  117 (334)
                                     .+...+..+.+. ++ ++|-.|+..
T Consensus        75 ---------------~s~~~a~~~~~~-G~-~vID~Sa~~   97 (344)
T 3tz6_A           75 ---------------MSKVQAPRFAAA-GV-TVIDNSSAW   97 (344)
T ss_dssp             ---------------HHHHHHHHHHHT-TC-EEEECSSTT
T ss_pred             ---------------HHHHHHHHHHhC-CC-EEEECCCcc
Confidence                           124555555555 33 788888753

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.13  E-value=0.0024  Score=54.95  Aligned_cols=68  Identities=15%  Similarity=0.202  Sum_probs=49.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      ++|+|.| .|-+|+.+++.|...|.+|++.+|+.++...+... +++.+     +.+++.+++.++|+|+.+...
T Consensus       158 ~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~-g~~~~-----~~~~l~~~l~~aDvVi~~~p~  225 (300)
T 2rir_A          158 SQVAVLG-LGRTGMTIARTFAALGANVKVGARSSAHLARITEM-GLVPF-----HTDELKEHVKDIDICINTIPS  225 (300)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-TCEEE-----EGGGHHHHSTTCSEEEECCSS
T ss_pred             CEEEEEc-ccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC-CCeEE-----chhhHHHHhhCCCEEEECCCh
Confidence            5799999 59999999999999999999999986532211111 23322     234577788899999998763

>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}

Probab=96.13  E-value=0.0028  Score=58.28  Aligned_cols=36  Identities=28%  Similarity=0.566  Sum_probs=32.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC--CCeEEEEEcCCCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ--GHSVRALVRRTSDI   37 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~--g~~V~~~~r~~~~~   37 (334)
                      |||.|.| +|++|..++..|++.  |++|++++|++++.
T Consensus        10 mkI~VIG-~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v   47 (481)
T 2o3j_A           10 SKVVCVG-AGYVGGPTCAMIAHKCPHITVTVVDMNTAKI   47 (481)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHHCTTSEEEEECSCHHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEECCHHHH
Confidence            6899998 899999999999998  79999999976543

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.12  E-value=0.002  Score=56.64  Aligned_cols=66  Identities=23%  Similarity=0.222  Sum_probs=47.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      +|||+|+ |.+|...++.+...|.+|+++++++++.+.+.+. +...+.   .+.+.+.   +++|+||+++|.
T Consensus       179 ~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l-Ga~~v~---~~~~~~~---~~~D~vid~~g~  244 (348)
T 3two_A          179 KVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSM-GVKHFY---TDPKQCK---EELDFIISTIPT  244 (348)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHT-TCSEEE---SSGGGCC---SCEEEEEECCCS
T ss_pred             EEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhc-CCCeec---CCHHHHh---cCCCEEEECCCc
Confidence            6999996 9999999999999999999999988765433332 222222   3333322   279999999874

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.12  E-value=0.0018  Score=57.20  Aligned_cols=72  Identities=18%  Similarity=0.159  Sum_probs=51.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCC------------------CChhhHHHHh
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDV------------------TDYRSLVDAC   63 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl------------------~d~~~~~~~~   63 (334)
                      ||+|+|+ |-+|...++.+...|.+|++++|++.+...+.+. +.+++..|.                  .+.+.+.+.+
T Consensus       186 kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~l-Ga~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~l  263 (381)
T 3p2y_A          186 SALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSV-GAQWLDLGIDAAGEGGYARELSEAERAQQQQALEDAI  263 (381)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHT-TCEECCCC-------------CHHHHHHHHHHHHHHH
T ss_pred             EEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCeEEeccccccccccchhhhhHHHHhhhHHHHHHHH
Confidence            6999995 9999999999999999999999987653322221 344443221                  1234677888


Q ss_pred             cCCCEEEEeccc
Q 019878           64 FGCHVIFHTAAL   75 (334)
Q Consensus        64 ~~~d~vih~a~~   75 (334)
                      .++|+||.++..
T Consensus       264 ~~aDIVI~tv~i  275 (381)
T 3p2y_A          264 TKFDIVITTALV  275 (381)
T ss_dssp             TTCSEEEECCCC
T ss_pred             hcCCEEEECCCC
Confidence            899999988743

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.11  E-value=0.00074  Score=58.28  Aligned_cols=66  Identities=12%  Similarity=0.052  Sum_probs=46.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |||.|.| +|.+|+.+++.|++.|++|++.+|++++.+.+... +......|      +.++++++|+||-+..
T Consensus         8 ~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-g~~~~~~~------~~e~~~~aDvvi~~vp   73 (303)
T 3g0o_A            8 FHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQACANLLAE-GACGAAAS------AREFAGVVDALVILVV   73 (303)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TCSEEESS------STTTTTTCSEEEECCS
T ss_pred             CeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc-CCccccCC------HHHHHhcCCEEEEECC
Confidence            6799997 89999999999999999999999987644322221 22221222      2345567888887754

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=96.11  E-value=0.0055  Score=53.73  Aligned_cols=69  Identities=14%  Similarity=0.135  Sum_probs=47.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCCeEEEEcCCCChh---hHHHHh-cCCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYR---SLVDAC-FGCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~---~~~~~~-~~~d~vih~a~   74 (334)
                      +|||+|+ |.+|...++.+...|. +|+++++++++.+.+.+. --..  .|..+.+   .+.++. .++|+||+++|
T Consensus       167 ~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v--~~~~~~~~~~~~~~~~~~g~D~vid~~g  240 (343)
T 2dq4_A          167 SVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRL--VNPLEEDLLEVVRRVTGSGVEVLLEFSG  240 (343)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEE--ECTTTSCHHHHHHHHHSSCEEEEEECSC
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhc--cCcCccCHHHHHHHhcCCCCCEEEECCC
Confidence            6999999 9999999999999998 999999886554333322 1122  2444322   222222 25999999987

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=96.09  E-value=0.0065  Score=51.78  Aligned_cols=61  Identities=21%  Similarity=0.153  Sum_probs=48.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      |+|.|.| .|-||+.+++.|...|.+|++.+|++.+...      ++       ..+++.++++++|+|+.+...
T Consensus       123 ~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~------~~-------~~~~l~ell~~aDiV~l~~P~  183 (290)
T 3gvx_A          123 KALGILG-YGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV------DV-------ISESPADLFRQSDFVLIAIPL  183 (290)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSCCCTTC------SE-------ECSSHHHHHHHCSEEEECCCC
T ss_pred             chheeec-cCchhHHHHHHHHhhCcEEEEEecccccccc------cc-------ccCChHHHhhccCeEEEEeec
Confidence            5789998 8999999999999999999999998765321      11       123567788889999988753

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.08  E-value=0.0045  Score=55.20  Aligned_cols=72  Identities=18%  Similarity=0.154  Sum_probs=49.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCC----------------------Chhh
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVT----------------------DYRS   58 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~----------------------d~~~   58 (334)
                      .+|+|+| +|-+|..+++.+...|.+|++++|++.+.....+. +.+++..|..                      ..+.
T Consensus       173 ~~V~ViG-aG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~-Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~  250 (384)
T 1l7d_A          173 ARVLVFG-VGVAGLQAIATAKRLGAVVMATDVRAATKEQVESL-GGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEA  250 (384)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHT-TCEECCC-----------------------CCHHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCeEEeecccccccccccccchhhcCHHHHhhhHHH
Confidence            3699999 59999999999999999999999987653221111 2333211221                      1233


Q ss_pred             HHHHhcCCCEEEEecc
Q 019878           59 LVDACFGCHVIFHTAA   74 (334)
Q Consensus        59 ~~~~~~~~d~vih~a~   74 (334)
                      +.+.+.++|+||+++.
T Consensus       251 l~~~~~~aDvVi~~~~  266 (384)
T 1l7d_A          251 VLKELVKTDIAITTAL  266 (384)
T ss_dssp             HHHHHTTCSEEEECCC
T ss_pred             HHHHhCCCCEEEECCc
Confidence            6777888999999883

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.06  E-value=0.0028  Score=54.34  Aligned_cols=67  Identities=15%  Similarity=0.201  Sum_probs=49.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      ++|+|.| .|-+|+.+++.|...|.+|++.+|+..+...+... +++.+     +.+++.+++.++|+|+.+..
T Consensus       156 ~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-g~~~~-----~~~~l~~~l~~aDvVi~~~p  222 (293)
T 3d4o_A          156 ANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLLARIAEM-GMEPF-----HISKAAQELRDVDVCINTIP  222 (293)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-TSEEE-----EGGGHHHHTTTCSEEEECCS
T ss_pred             CEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHC-CCeec-----ChhhHHHHhcCCCEEEECCC
Confidence            4799999 79999999999999999999999986532211111 23332     23456778889999999874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	334
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	4e-44
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	1e-43
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-39
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	3e-37
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	2e-29
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	8e-29
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	5e-27
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	6e-27
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	1e-26
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	1e-25
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	6e-25
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	2e-24
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	1e-21
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	2e-21
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	5e-21
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	2e-20
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	9e-19
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	6e-18
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	7e-18
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	1e-17
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	4e-16
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	5e-15
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	5e-15
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	6e-14
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	3e-13
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	7e-12
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	4e-11
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	4e-10
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	6e-09
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	2e-07
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	4e-07
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	6e-07
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	3e-06
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	4e-06
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	6e-06
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	8e-06
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	8e-06
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	2e-05
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	4e-05
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	8e-05
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	1e-04
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	1e-04
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	1e-04
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	3e-04
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	4e-04
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	4e-04
d1vm6a3	128	c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate red	6e-04
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	7e-04
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	7e-04
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	0.001
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	0.001
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	0.001
d1mlda1	144	c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus s	0.001
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	0.002
d2cmda1	145	c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichi	0.002
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	0.002
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	0.002
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	0.003

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score =  152 bits (386), Expect = 4e-44
 Identities = 59/355 (16%), Positives = 128/355 (36%), Gaps = 46/355 (12%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS------DISGLPSEGALELVYGDVT 54
           MKIL++G +G++G  +   ++K        + + +       +S +         + D+ 
Sbjct: 1   MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60

Query: 55  DYRSLVDAC--FGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKET------ 104
           D   +      +    + H AA   V+  +  P+ F   N+ G   +++ A++       
Sbjct: 61  DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGE 120

Query: 105 --KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ-------YERSKAVADKIALQ 155
             K   +  + S+    G        EN V    +  T        Y  SKA +D +   
Sbjct: 121 DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180

Query: 156 -AASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV 214
              + GLP +       YGP       L+  +++    G+     G G+    + +V+D 
Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH 239

Query: 215 VDGHIAAMEKGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVF 274
                  + +G++GE Y + G                   +    +   + +    I+  
Sbjct: 240 ARALHMVVTEGKAGETYNIGG----------------HNEKKNLDVVFTICDLLDEIVPK 283

Query: 275 FSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRS 328
            +    ++  ++    H    ++A    K   ELG+ P  + + G+++ + W  +
Sbjct: 284 ATSYREQITYVADRPGHD--RRYAIDAGKISRELGWKPLETFESGIRKTVEWYLA 336

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  150 bits (379), Expect = 1e-43
 Identities = 63/337 (18%), Positives = 124/337 (36%), Gaps = 45/337 (13%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVR----RTSDISGLPSEGALELVYGDVTDYR 57
           +IL++G +G++G  L   L+  GH V  +      R  ++         EL+  DV +  
Sbjct: 3   RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE-- 60

Query: 58  SLVDACFGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS 115
                      I+H A+      ++ +P +    N  G  N++  AK      +++  S+
Sbjct: 61  ---PLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--RLLLAST 115

Query: 116 FFALGSTDGYIADENQVHEEKYFCTQ--YERSKAVADKIALQ-AASEGLPIVPVYPGVIY 172
               G  + +   E+          +  Y+  K VA+ +       EG+ +        +
Sbjct: 116 SEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTF 175

Query: 173 GPG-KLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERY 231
           GP   +  G +V+  +++   G      G G+   +F +V D+V+G +A M    S    
Sbjct: 176 GPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVN 235

Query: 232 LLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVH 291
           L   E  + ++   +   + G+                           ++  +S     
Sbjct: 236 LGNPEEHTILEFAQLIKNLVGSG-------------------------SEIQFLSEAQDD 270

Query: 292 VLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLR 327
               +      KAK  LG+ P   L+EGL + + + R
Sbjct: 271 P--QKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFR 305

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score =  139 bits (352), Expect = 1e-39
 Identities = 70/343 (20%), Positives = 127/343 (37%), Gaps = 47/343 (13%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVR-----------RTSDISGLPSEGALELV 49
           M++LV+G +G++G      LL   +                    ++++ + ++  L  V
Sbjct: 1   MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFV 60

Query: 50  YGDVTDYRSLVDACFGCHVIFHTA--ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV 107
           +GD+ D   L     G   I H A  + V+  +   S F   NV+G + ++Q A +    
Sbjct: 61  HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGV- 119

Query: 108 EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ-AASEGLPIVPV 166
            ++++ S+    GS D     E+   E     + Y  SKA +D +A     + GL +   
Sbjct: 120 GRVVHVSTNQVYGSIDSGSWTESSPLEPN---SPYAASKAGSDLVARAYHRTYGLDVRIT 176

Query: 167 YPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR 226
                YGP +     L+   +    +G      G G +   + H DD   G    +  GR
Sbjct: 177 RCCNNYGPYQ-HPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR 235

Query: 227 SGERYLL-TGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLI 285
           +GE Y +  G   +  ++  +     G                   +   +   G     
Sbjct: 236 AGEIYHIGGGLELTNRELTGILLDSLGADWS--------------SVRKVADRKGHDL-- 279

Query: 286 SYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLR 327
                     +++    K + ELGY P+ S  +GL   + W R
Sbjct: 280 ----------RYSLDGGKIERELGYRPQVSFADGLARTVRWYR 312

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score =  134 bits (338), Expect = 3e-37
 Identities = 59/349 (16%), Positives = 106/349 (30%), Gaps = 28/349 (8%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS----------GLPSEGALELVYG 51
             L++G +G  G  L   LL++G+ V  + RR S  +                   L YG
Sbjct: 3   VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62

Query: 52  DVTDYRSLVDACFGC----HVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKET--K 105
           D++D  +L                  + V      P     V+  G   +++A +    +
Sbjct: 63  DLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLE 122

Query: 106 TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ-AASEGLPIV 164
              +    S+    G        E      +   + Y  +K  A  I +    S G+   
Sbjct: 123 KKTRFYQASTSELYGLVQEIPQKETTPFYPR---SPYAVAKLYAYWITVNYRESYGMYAC 179

Query: 165 PVYPGVIYGPG---KLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAA 221
                    P       T  +   +           Y+G  +    + H  D V      
Sbjct: 180 NGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMM 239

Query: 222 MEKGRSGERYLLTGENASFMQIFDMAAVITGTSRPR--FCIPLWLIEAYGWILVFFSRIT 279
           +++ +  +  + TG   S  Q  +MAA   G         +    I              
Sbjct: 240 LQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKP 299

Query: 280 GKLPLISYPTVHVLAHQWAY--SCVKAKTELGYNPR-SLKEGLQEVLPW 325
           G + +   P     A          KA  +LG+ P  +L+E + E++  
Sbjct: 300 GDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVAN 348

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  113 bits (283), Expect = 2e-29
 Identities = 62/354 (17%), Positives = 115/354 (32%), Gaps = 36/354 (10%)

Query: 2   KI-LVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-----------GLPSEGALELV 49
            + L++G +G  G  L   LL++G+ V  +VRR+S  +               EG ++L 
Sbjct: 2   NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH 61

Query: 50  YGDVTDYRSLVDACFGC----HVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK 105
           YGD+TD   LV                 + V+           V+  G   ++ A K   
Sbjct: 62  YGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCG 121

Query: 106 --TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ-AASEGLP 162
                K    S+    G        E      +   + Y  +K  A  I +    +  L 
Sbjct: 122 LINSVKFYQASTSELYGKVQEIPQKETTPFYPR---SPYGAAKLYAYWIVVNFREAYNLF 178

Query: 163 IVPVYPGVIYGPG---KLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHI 219
            V         P       T  +   +            +G  + +  + H  D V+   
Sbjct: 179 AVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMW 238

Query: 220 AAMEKGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRIT 279
             ++     +  + TGE  S  +  + + +  G +          +           ++ 
Sbjct: 239 LMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEV----GRCKETGKVH 294

Query: 280 GKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEV----LPWLRS 328
             + L  Y    V        C KAK +L + PR +  E ++E+    +  +R+
Sbjct: 295 VTVDLKYYRPTEV--DFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVELMRT 346

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score =  111 bits (277), Expect = 8e-29
 Identities = 57/338 (16%), Positives = 110/338 (32%), Gaps = 40/338 (11%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-----ISGLPSEGALELVYGDVTDY 56
             LV+G +G  G  L   LL++G+ V  LV R S      +  L  EG ++   GD+ D 
Sbjct: 2   SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADA 61

Query: 57  RSLVDACFGCHVIFHTAALVEPWLPDPSR----FFAVNVEGLKNVVQAAKETKTVEKIIY 112
            S+  A              + ++            V+  G+ ++++A ++     +   
Sbjct: 62  CSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQ 121

Query: 113 TSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ-AASEGLPIVPVYPGVI 171
            S+    G       DEN      Y  + Y  +K     I +    S GL          
Sbjct: 122 ASTSEMFGLIQAERQDENTPF---YPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNH 178

Query: 172 YGP---GKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSG 228
             P    +  T  +   +   +   +    +G  + +  +    D V+     +++ ++ 
Sbjct: 179 ESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDKAD 238

Query: 229 ERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYP 288
           +  + TG   +   +  +A    G     F            + V               
Sbjct: 239 DYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPA--------- 289

Query: 289 TVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPW 325
                         KA+  LG+ PR SL E ++ ++  
Sbjct: 290 --------------KAQRVLGWKPRTSLDELIRMMVEA 313

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score =  106 bits (265), Expect = 5e-27
 Identities = 54/359 (15%), Positives = 91/359 (25%), Gaps = 61/359 (16%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS--GLPSEGALELVYGDVTDYRSL 59
            I V GA+G  G  L       GH VRA V     +    L +   + L  G + +   L
Sbjct: 5   TIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPL 64

Query: 60  VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
           +D  F    +              +      +   K++  AAK   T++  IY       
Sbjct: 65  MDTLFEGAHLAFIN---------TTSQAGDEIAIGKDLADAAKRAGTIQHYIY------- 108

Query: 120 GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTT 179
            S+    +          +  ++     V             P   VY G+         
Sbjct: 109 -SSMPDHSLYGPWPAVPMWAPKFTVENYVRQLGL--------PSTFVYAGIYNNNFTSLP 159

Query: 180 GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAME---KGRSGERYLLTGE 236
             L    ++                        DV    +   +   +  +G R  LT E
Sbjct: 160 YPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFE 219

Query: 237 NASFMQIFDMAAVITGTSRPRFCIPLWLI-----EAYGWILVFFSRITGKLPLISYPTV- 290
             S +Q+    +           +P   I       Y   L     + G+     +P   
Sbjct: 220 TLSPVQVCAAFSRALNRRVTYVQVPKVEIKVNIPVGYREQLEAIEVVFGEHKAPYFPLPE 279

Query: 291 -------------------HVLAHQWAYS------CVKAKTELGYNPRSLKEGLQEVLP 324
                                                    +L    R ++E  +EV P
Sbjct: 280 FSRPAAGSPKGLGPANGKGAGAGMMQGPGGVISQRVTDEARKLWSGWRDMEEYAREVFP 338

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score =  106 bits (265), Expect = 6e-27
 Identities = 69/346 (19%), Positives = 116/346 (33%), Gaps = 46/346 (13%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVR-------RTSDISGLPSEGALELVYGDV 53
             I+V+G +G++G    H +      V   V          +++  +  +  +ELV GD+
Sbjct: 3   KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDR-VELVVGDI 61

Query: 54  TDYRSLVDACFGCHVIFHTA--ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKII 111
            D   +         I H A  +  +  L DPS F   N  G   +++AA++       +
Sbjct: 62  ADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHV 121

Query: 112 YTSSFFALGSTDGYIADENQVHEEKYFCTQ-------YERSKAVADKIALQ-AASEGLPI 163
            T   +        +    +   EK+           Y  +KA +D I      S G+  
Sbjct: 122 STDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKA 181

Query: 164 VPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAME 223
                   YGP +      + + +     G  P   G G +   + H +D   G  A + 
Sbjct: 182 TISNCSNNYGPYQHIEKF-IPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILT 240

Query: 224 KGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLP 283
           KGR GE Y                                  E    IL    +      
Sbjct: 241 KGRMGETY-----------------------LIGADGEKNNKEVLELILEKMGQPKDAYD 277

Query: 284 LISYPTVHVLAHQWAYSCVKAKTELGYNPR--SLKEGLQEVLPWLR 327
            ++    H L  ++A    K + ELG+ P+     EGL+E + W  
Sbjct: 278 HVTDRAGHDL--RYAIDASKLRDELGWTPQFTDFSEGLEETIQWYT 321

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  106 bits (264), Expect = 1e-26
 Identities = 56/341 (16%), Positives = 108/341 (31%), Gaps = 43/341 (12%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           +KI ++GA G++   +   L  +GH V A   + ++          E    D+    + +
Sbjct: 16  LKISITGAGGFIASHIARRLKHEGHYVIASDWKKNE-HMTEDMFCDEFHLVDLRVMENCL 74

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFF---AVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
               G   +F+ AA +       S        N     N+++AA+    +++  Y SS  
Sbjct: 75  KVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASSAC 133

Query: 118 ALGSTDGYIADENQVHEEKYFCTQ----YERSKAVADKIALQAASE-GLPIVPVYPGVIY 172
                         + E   +  +    +   K   +++      + G+         IY
Sbjct: 134 IYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIY 193

Query: 173 GPG----KLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSG 228
           GP             A     + +       G G    SF  +D+ V+G +   +     
Sbjct: 194 GPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFRE 253

Query: 229 ERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYP 288
              + + E  S  ++ +M         P   IP                + G+    +  
Sbjct: 254 PVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIP------------GPEGVRGRNSDNN-- 299

Query: 289 TVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRS 328
                           K +LG+ P   LKEGL+    W++ 
Sbjct: 300 --------------LIKEKLGWAPNMRLKEGLRITYFWIKE 326

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score =  102 bits (254), Expect = 1e-25
 Identities = 56/343 (16%), Positives = 101/343 (29%), Gaps = 51/343 (14%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           ++ ++G  G +G  +   L ++G     L  R                  ++ D R++ D
Sbjct: 4   RVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE---------------LNLLDSRAVHD 48

Query: 62  --ACFGCHVIFHTAALVEPW---LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF 116
             A      ++  AA V         P+ F   N+    N++ AA +   V K+++  S 
Sbjct: 49  FFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSS 107

Query: 117 FALGSTDGYIADENQVHEEKYFCTQ--YERSKAVADKIALQAASE-GLPIVPVYPGVIYG 173
                       E+++ +     T   Y  +K    K+      + G     V P  +YG
Sbjct: 108 CIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYG 167

Query: 174 PG--------KLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG 225
           P          +    L                 G G     F HVDD+    I  ME  
Sbjct: 168 PHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMEL- 226

Query: 226 RSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLI 285
                      +  +++                C    L +         +++ G    +
Sbjct: 227 ----------AHEVWLENTQPMLSHINVGTGVDCTIRELAQT-------IAKVVGYKGRV 269

Query: 286 SYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLR 327
            +              V    +LG+    SL+ GL     W  
Sbjct: 270 VFDASKPDGTPRKLLDVTRLHQLGWYHEISLEAGLASTYQWFL 312

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score =  100 bits (250), Expect = 6e-25
 Identities = 70/355 (19%), Positives = 110/355 (30%), Gaps = 53/355 (14%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS------DISGLPSEGALELVYGDVT 54
           M++LV+G SGY+G   C  LL+ GH V  L    +       +           V GD+ 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60

Query: 55  DYRSLVDAC--FGCHVIFHTAAL--VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKI 110
           +   + +         + H A L  V   +  P  ++  NV G   ++ A +    V+  
Sbjct: 61  NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNF 119

Query: 111 IYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGV 170
           I++SS    G        E+             +         LQ A     I  +    
Sbjct: 120 IFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFN 179

Query: 171 IYGP------GKLTTG--NLVAKLMIERFNGRLPGYIGYGNDRF--------SFCHVDDV 214
             G       G+   G  N +   + +   GR      +GND           + HV D+
Sbjct: 180 PVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDL 239

Query: 215 VDGHIAAMEKGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVF 274
            DGH+ AM                           I           L ++ A       
Sbjct: 240 ADGHVVAM-----------------EKLANKPGVHIYNLGAGVGNSVLDVVNA------- 275

Query: 275 FSRITGKLPLISY-PTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLR 327
           FS+  GK     + P        +     KA  EL +    +L E  Q+   W  
Sbjct: 276 FSKACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQS 330

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 99.6 bits (247), Expect = 2e-24
 Identities = 58/344 (16%), Positives = 109/344 (31%), Gaps = 40/344 (11%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS----------DISGLPSEGALELVYG 51
             L++G +G++G  L   LLK    V  L    +           +         + + G
Sbjct: 18  VWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQG 77

Query: 52  DVTDYRSLVDACFGC--HVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEK 109
           D+ +     +AC G    +       V   + DP    A N++G  N++ AA++ K  + 
Sbjct: 78  DIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKV-QS 136

Query: 110 IIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ-AASEGLPIVPVYP 168
             Y +S    G   G    E+ + +     + Y  +K V +  A   +   G   + +  
Sbjct: 137 FTYAASSSTYGDHPGLPKVEDTIGKPL---SPYAVTKYVNELYADVFSRCYGFSTIGLRY 193

Query: 169 GVIY---GPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG 225
             ++            ++ K       G      G G     FC++++ V  ++ A   G
Sbjct: 194 FNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAG 253

Query: 226 RSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLI 285
                 +          +  +   +               +      V + R        
Sbjct: 254 LDARNQVYNIAVGGRTSLNQLFFAL--------------RDGLAENGVSYHREPVYRDFR 299

Query: 286 SYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRS 328
                H LA        KA   LGY P+  +  G+   +PW   
Sbjct: 300 EGDVRHSLA-----DISKAAKLLGYAPKYDVSAGVALAMPWYIM 338

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 91.7 bits (226), Expect = 1e-21
 Identities = 61/363 (16%), Positives = 118/363 (32%), Gaps = 63/363 (17%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVR-----RTSDISGLPSEGALELVYGDVTDY 56
           K+L++G  G+LG  L    L QG  +           T ++  L S G  E V+GD+ + 
Sbjct: 2   KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNK 61

Query: 57  RSLVDACFGCH--VIFHTA--ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY 112
             +            FH A    +   + +P   F +NV G  N+++A ++  +   IIY
Sbjct: 62  NDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIY 121

Query: 113 TSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE------------- 159
           +S+    G  + Y  +E +                  D  +    S+             
Sbjct: 122 SSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARI 181

Query: 160 -GLPIVPVYPGVIYGPGKLTTG-------NLVAKLMIERFNGRLPGYIGYGNDRFSFCHV 211
            GL  V      +YG  +  T             + I+    +     G G       H 
Sbjct: 182 FGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHA 241

Query: 212 DDVVDGHIAAMEK-----GRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIE 266
           +D++  +  A+       G +         + S +++F +             +P+   +
Sbjct: 242 EDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRESD 301

Query: 267 AYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPW 325
              ++                               K    + ++P+ S K+G+Q++  W
Sbjct: 302 QRVFVA---------------------------DIKKITNAIDWSPKVSAKDGVQKMYDW 334

Query: 326 LRS 328
             S
Sbjct: 335 TSS 337

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 91.0 bits (224), Expect = 2e-21
 Identities = 54/352 (15%), Positives = 104/352 (29%), Gaps = 57/352 (16%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALE-------LVYGDVT 54
            +LV+GA+G++   +   LL+ G+ VR   R  S ++ L      +        V  D+ 
Sbjct: 13  LVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDML 72

Query: 55  DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
              +  D            A V  +           + G  N ++AA  T +V++ + TS
Sbjct: 73  KQGAY-DEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTS 131

Query: 115 SFFALGSTDGYIADENQVHEEKYF-----------------CTQYERSKAVADKIALQAA 157
           S  +       +       +                        Y  SK  A+  A +  
Sbjct: 132 STVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFM 191

Query: 158 SEGLPIVP---VYPGVIYGP--GKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVD 212
            E  P      V P    G      T     +  M+  FNG +   +     ++    VD
Sbjct: 192 DENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAVD 251

Query: 213 DVVDGHIAAMEKGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWIL 272
             +      +       R   T     +  +      +     P    P    +    + 
Sbjct: 252 IGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLY----PSKTFPADFPDQGQDLS 307

Query: 273 VFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNP-RSLKEGLQEVL 323
            F +  +                      ++    LG    RS++E +++++
Sbjct: 308 KFDTAPS----------------------LEILKSLGRPGWRSIEESIKDLV 337

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 89.4 bits (220), Expect = 5e-21
 Identities = 41/337 (12%), Positives = 103/337 (30%), Gaps = 42/337 (12%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGA-------LELVYGDV 53
            ++L+ G +GY+G R+ +A +  GH    L R     +    +          +L+   +
Sbjct: 4   SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASL 63

Query: 54  TDYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYT 113
            D++ LVDA     V+                  + ++     +V+A KE   +++ + +
Sbjct: 64  DDHQRLVDALKQVDVVISAL---------AGGVLSHHILEQLKLVEAIKEAGNIKRFLPS 114

Query: 114 SSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYG 173
                    +  +   +    +K    +   +               +P   V   +  G
Sbjct: 115 EFGMDPDIMEHALQPGSITFIDKRKVRRAIEAA-------------SIPYTYVSSNMFAG 161

Query: 174 PGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGER--Y 231
                 G+L                 G GN +  +   DDV    I +++  ++  +  Y
Sbjct: 162 YF---AGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMY 218

Query: 232 LLTGENA-SFMQIFDMAAVITGTSRPRFCIPLW----LIEAYGWILVFFSRITGKLPLIS 286
           +    N  S  ++  +   ++  +  +  I        ++   +          ++    
Sbjct: 219 IRPPMNILSQKEVIQIWERLSEQNLDKIYISSQDFLADMKDKSYEEKIVRCHLYQIFFRG 278

Query: 287 YPTVHVLAHQWAYSCVKAKTELGYNPRSLKEGLQEVL 323
                 +      +    K        ++   L+  +
Sbjct: 279 DLYNFEIGPNAIEAT---KLYPEVKYVTMDSYLERYV 312

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 87.9 bits (216), Expect = 2e-20
 Identities = 48/327 (14%), Positives = 95/327 (29%), Gaps = 27/327 (8%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
            +IL+ GA+GY+G  +  A L  GH    LVR ++  S       LE             
Sbjct: 4   SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASG------A 57

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
           +   G      +       +              +  +  A +     K  + S F    
Sbjct: 58  NIVHGSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDV 117

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTG 180
                +     V E K    +   ++ +                 V      G       
Sbjct: 118 DNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTY-------------VSSNCFAGYF----L 160

Query: 181 NLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGER--YLLTGENA 238
             +A+  +          +G GN R  F   +D+    I A++  R+  +  YL    N 
Sbjct: 161 RSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANT 220

Query: 239 -SFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQW 297
            S  ++  +       +  +  +P   +        F + I+  +    +        + 
Sbjct: 221 LSLNELVALWEKKIDKTLEKAYVPEEEVLKLIADTPFPANISIAISHSIFVKGDQTNFEI 280

Query: 298 AYSCVKA-KTELGYNPRSLKEGLQEVL 323
             + V+A +        ++ E L   +
Sbjct: 281 GPAGVEASQLYPDVKYTTVDEYLSNFV 307

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 82.6 bits (202), Expect = 9e-19
 Identities = 41/328 (12%), Positives = 77/328 (23%), Gaps = 50/328 (15%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MKIL++GA+G LG  +   L  +   V     +  DI+             +V       
Sbjct: 2   MKILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDIT-------------NVLAVNKFF 48

Query: 61  DAC-FGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
           +       +       V+         + +N  G KN+  AA         I T      
Sbjct: 49  NEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYV--- 105

Query: 120 GSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTT 179
                +  +  +   E               +      +       V    +YG G    
Sbjct: 106 -----FDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNPKYYIVRTAWLYGDGN--- 157

Query: 180 GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTGENAS 239
                   +              +   +     D+    +  +++   G  +       S
Sbjct: 158 ---NFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEKNYGTFHCTCKGICS 214

Query: 240 FMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAY 299
           +         +TG                                  +P           
Sbjct: 215 WYDFAVEIFRLTGIDVKVTPCTTE----------------------EFPRPAKRPKYSVL 252

Query: 300 SCVKAKTELGYNPRSLKEGLQEVLPWLR 327
                +   G   R  KE L+E +  L+
Sbjct: 253 RNYMLELTTGDITREWKESLKEYIDLLQ 280

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 81.2 bits (199), Expect = 6e-18
 Identities = 50/350 (14%), Positives = 106/350 (30%), Gaps = 39/350 (11%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG------LPSEGALELVYGDVTDY 56
           +LV+G +GY+G      L++ G+        ++          + ++  +     D+ D 
Sbjct: 4   VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDR 63

Query: 57  RSLVDAC--FGCHVIFHTAA--LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY 112
           + L      +    + H A    V      P R++  N+ G   +++  ++   V K ++
Sbjct: 64  KGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQ-YNVSKFVF 122

Query: 113 TSSFFALGSTDGYIADENQVHEEKYFCT-QYERSKAVADKIALQAASE-----------G 160
           +SS    G    +        E     T  Y  +K   + I     +             
Sbjct: 123 SSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRY 182

Query: 161 LPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGND--RFSFCHVDDVVDGH 218
              +  +P  + G   L   N +   M +   GR      +G+D        + D +   
Sbjct: 183 FNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVV 242

Query: 219 IAAMEKGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRI 278
             A     + +             +     + +G     F +     +A G         
Sbjct: 243 DLAKGHIAALQYL---EAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGI-------- 291

Query: 279 TGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLR 327
              LP                   +AK EL +     +++  +++  W  
Sbjct: 292 --DLPYKVTGRRAGDVLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTT 339

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 80.9 bits (198), Expect = 7e-18
 Identities = 48/346 (13%), Positives = 104/346 (30%), Gaps = 47/346 (13%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-----------GLPSEGALELVY 50
             L++G +G  G  L   LL +G+ V  L+RR+S+ +              ++  ++L Y
Sbjct: 3   IALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHY 62

Query: 51  GDVTDYRSLVDACFGCHVIFHTAALVEPWLP----DPSRFFAVNVEGLKNVVQAAKETKT 106
            D+TD  SL                 +  +      P     V   G   +++A +    
Sbjct: 63  ADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTI 122

Query: 107 VEKIIYTSSFFALGSTDGYIADENQVHEEKYF--CTQYERSKAVADKIALQAA-SEGLPI 163
                    ++  GS++ + +      E   F   + Y  SK  A    +    + GL  
Sbjct: 123 DSGRTVK--YYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLFA 180

Query: 164 VPVYPGVIYGPG---KLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIA 220
                     P       T  +   L   +   +   ++G       +    D V+    
Sbjct: 181 CNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWL 240

Query: 221 AMEKGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITG 280
            +++ +  +                        +          ++     L    +   
Sbjct: 241 MLQQEKPDDYV---------------------VATEEGHTVEEFLDVSFGYLGLNWKDYV 279

Query: 281 KLPLISYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPW 325
           ++    +    V          KAK  LG+ P+   ++ ++ ++  
Sbjct: 280 EIDQRYFRPAEV--DNLQGDASKAKEVLGWKPQVGFEKLVKMMVDE 323

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 80.3 bits (196), Expect = 1e-17
 Identities = 56/344 (16%), Positives = 110/344 (31%), Gaps = 36/344 (10%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGAL----ELVYGDVTDYR 57
           ++ V+G +G+ GG L   L   G +V+        +  L     +    +   GD+ D  
Sbjct: 10  RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQN 69

Query: 58  SLVDACFGCHVIFHTAALVEPWLPD----PSRFFAVNVEGLKNVVQAAKETKTVEKIIYT 113
            L+++              +P +      P   ++ NV G   +++A +    V+ ++  
Sbjct: 70  KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNI 129

Query: 114 SSFFALGSTDGYIADENQVH--------EEKYFCTQYERSKAVADKIALQAASEGLPIVP 165
           +S     + +                    K        S   +          G  +  
Sbjct: 130 TSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVAT 189

Query: 166 VYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG 225
           V  G + G G      +V   ++  F    P  I   +    + HV + + G++   +K 
Sbjct: 190 VRAGNVIGGGDWALDRIV-PDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQKL 248

Query: 226 RSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLI 285
            +          A         A  T        +  +  E   W L   +         
Sbjct: 249 YTDGAE-----YAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHE----- 298

Query: 286 SYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRS 328
                   AH     C KAK +LG++PR +L   L+ ++ W ++
Sbjct: 299 --------AHYLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKN 334

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.9 bits (180), Expect = 4e-16
 Identities = 43/237 (18%), Positives = 69/237 (29%), Gaps = 37/237 (15%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
            KI + GA+G  G       ++ G+ V  LVR +S +       A  +V GDV     + 
Sbjct: 4   KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPA-HVVVGDVLQAADVD 62

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG 120
               G   +            +      V  EG +N+V A K    V+K++  +S F L 
Sbjct: 63  KTVAGQDAVIVLLG-----TRNDLSPTTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLW 116

Query: 121 STDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTG 180
                      V ++     +  R               GL  V V P  I    +  TG
Sbjct: 117 DPTKVPPRLQAVTDDHIRMHKVLR-------------ESGLKYVAVMPPHIG--DQPLTG 161

Query: 181 NLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR-SGERYLLTGE 236
                                G          D+    +  +      G     + +
Sbjct: 162 AYTV--------------TLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSHQ 204

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.8 bits (177), Expect = 5e-15
 Identities = 59/365 (16%), Positives = 110/365 (30%), Gaps = 69/365 (18%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGA------------LELV 49
           K+LV+G +GY+G      LL+ G+    +    +   G  S               +E  
Sbjct: 4   KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFE 63

Query: 50  YGDVTDYRSLVDACFGCHVIFHTA----ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK 105
             D+ D  +L         +          V   +  P  ++ VN+ G   +++  K   
Sbjct: 64  EMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG 123

Query: 106 TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADK--IALQAASEGLPI 163
               +  +S+       +      ++ H        Y +SK   ++    L  A +    
Sbjct: 124 VKNLVFSSSATV---YGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNA 180

Query: 164 VPVYPGVIYGP------GKLTTG--NLVAKLMIERFNGRLPGYIGYGNDRF--------S 207
           V +      G       G+   G  N +   + +   GR      +GND           
Sbjct: 181 VLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRD 240

Query: 208 FCHVDDVVDGHIAAME---KGRSGERYLLTGENA-SFMQIFDMAAVITGTSRPRFCIPLW 263
           + HV D+  GHIAA+    +      Y L      S +Q+       +G   P   +   
Sbjct: 241 YIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARR 300

Query: 264 LIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEV 322
             +                                 +   A+ ELG+     L    +++
Sbjct: 301 EGDVAACYA---------------------------NPSLAQEELGWTAALGLDRMCEDL 333

Query: 323 LPWLR 327
             W +
Sbjct: 334 WRWQK 338

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 71.4 bits (173), Expect = 5e-15
 Identities = 31/255 (12%), Positives = 61/255 (23%), Gaps = 17/255 (6%)

Query: 1   MK-ILVSGASGYLGGRLCHALLKQGHS--VRALVRRTSDISGLPSEGALELVYGDVTDYR 57
           +  +LV+GASG  G  +   L +       + LVR       +  E  + +      D  
Sbjct: 3   LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSI 62

Query: 58  SLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFF 117
           +         VI  +A        DP++                 +    +  I  +   
Sbjct: 63  NPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA 122

Query: 118 ALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKL 177
            +       +      +                K     A  G P   +  G +      
Sbjct: 123 GVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKE-- 180

Query: 178 TTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAME-KGRSGERYLLTGE 236
                            +                 DV +  I A+  +    + + L  +
Sbjct: 181 ----------GGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSK 230

Query: 237 N-ASFMQIFDMAAVI 250
              +     D  A+ 
Sbjct: 231 PEGTSTPTKDFKALF 245

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 69.2 bits (167), Expect = 6e-14
 Identities = 43/347 (12%), Positives = 97/347 (27%), Gaps = 32/347 (9%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSL 59
           M++L+ G +G++G  L   LL++ H  V  L   +  IS   +      V GD++ +   
Sbjct: 1   MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEW 60

Query: 60  VDA-----CFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
           ++           ++     +     P                       + +       
Sbjct: 61  IEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEV 120

Query: 115 SFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGP 174
                            V         Y  SK + D++      +      ++    +  
Sbjct: 121 YGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMG 180

Query: 175 GKLT--------TGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAME--- 223
            +L         +   + +L++    G     I  G  +  F  + D ++     +E   
Sbjct: 181 PRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAG 240

Query: 224 KGRSGERYLLTGENASFM--QIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGK 281
               GE   +          ++ +M          R   P +          ++ +    
Sbjct: 241 NRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQD 300

Query: 282 LPLISYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLR 327
           +            H+   S   A   L + P+  ++E + E L +  
Sbjct: 301 VE-----------HRKP-SIRNAHRCLDWEPKIDMQETIDETLDFFL 335

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 66.9 bits (161), Expect = 3e-13
 Identities = 45/331 (13%), Positives = 89/331 (26%), Gaps = 37/331 (11%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           M IL+ G +G +G  L  +L   G+ +   V                   GD ++ + + 
Sbjct: 1   MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKE-------------FCGDFSNPKGVA 47

Query: 61  DAC--FGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA 118
           +        VI + AA       +     A  +        A    +T   +++ S+ + 
Sbjct: 48  ETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYV 107

Query: 119 LGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLT 178
              T      E            Y ++K   +K       + L     +     G     
Sbjct: 108 FPGTGDIPWQETDAT---SPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAK 164

Query: 179 TGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTGENA 238
           T   +AK                 +   +    + + D    A+                
Sbjct: 165 TMLRLAKERQTLSV--------INDQYGAPTGAELLADCTAHAIRV-----------ALN 205

Query: 239 SFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWA 298
                     V  GT+       L   EA    +         +P  +YPT         
Sbjct: 206 KPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSR 265

Query: 299 YSCVKAKTELGYNPRSLKEGLQEVLPWLRSS 329
            +  K +          + G++ +L  + ++
Sbjct: 266 LNTEKFQRNFDLILPQWELGVKRMLTEMFTT 296

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 61.7 bits (148), Expect = 7e-12
 Identities = 32/242 (13%), Positives = 71/242 (29%), Gaps = 37/242 (15%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD 61
           ++L++GA+G  G  L   +L +    + +      ++  P                 L  
Sbjct: 4   RVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRL-----DNPVGPLAELLPQ 58

Query: 62  ACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS 121
                   F               F AV+ +    V + A E      ++          
Sbjct: 59  LDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVV--------- 109

Query: 122 TDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGN 181
                   + +  +      Y R K   ++   +     L I    P +++GP +     
Sbjct: 110 --------SALGADAKSSIFYNRVKGELEQALQEQGWPQLTI--ARPSLLFGPRE---EF 156

Query: 182 LVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTGENASFM 241
            +A+++       LPG       ++      D+         +   G R++   E+    
Sbjct: 157 RLAEILAAPIARILPG-------KYHGIEACDLARALWRLALEEGKGVRFV---ESDELR 206

Query: 242 QI 243
           ++
Sbjct: 207 KL 208

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.2 bits (144), Expect = 4e-11
 Identities = 36/249 (14%), Positives = 62/249 (24%), Gaps = 35/249 (14%)

Query: 1   MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISGLPSEGALELVYGDVTDYRS 58
             + + GASG  G  L   +L+QG    V  + RR                     +   
Sbjct: 15  KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAY---------KNVNQEV 65

Query: 59  LVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA 118
           +       +        V       +R  A     ++       ++  + K      F  
Sbjct: 66  VDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNL 125

Query: 119 LGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLT 178
           L S     +      + K                               PGV+    +  
Sbjct: 126 LSSKGADKSSNFLYLQVKGEVEAKVEELKFDRYSV------------FRPGVLLCDRQ-- 171

Query: 179 TGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTGENA 238
                  L+  +F G LP              V  VV   +  + + R  +  LL  +  
Sbjct: 172 ESRPGEWLVR-KFFGSLPD----SWASGHSVPVVTVVRAMLNNVVRPRDKQMELLENK-- 224

Query: 239 SFMQIFDMA 247
               I D+ 
Sbjct: 225 ---AIHDLG 230

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 58.3 bits (139), Expect = 4e-10
 Identities = 62/394 (15%), Positives = 122/394 (30%), Gaps = 100/394 (25%)

Query: 1   MKILVSGASGYLGGRLCHALLKQ-GHSVRAL----------------------VRRTSDI 37
           M++LV G +GY+G     ALL+   HSV  +                      ++++   
Sbjct: 3   MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGP 62

Query: 38  SGLPSEGALELVYGDVTDYRSLVDACFGCHVI-----FHTAALVEPWLPDPSRFFAVNVE 92
               ++    L  GDV +   L         I           V   + DP +++  NV 
Sbjct: 63  KPPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVV 122

Query: 93  GLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC---TQYERSKAVA 149
           G+  ++QA    K  + I  +S+      T G ++   +  +        + Y  SK +A
Sbjct: 123 GILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIA 182

Query: 150 DKIALQ-AASEGLPIVPVYPGVIYGPGKLT--------TGNLVAKLMIERFNGRLPG--- 197
           +++    A + G+  + +      G  +          + +L+  ++    +   P    
Sbjct: 183 ERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRL 242

Query: 198 -------------------YIGYGNDRFSFCHVDDVVDGHIAAMEK---------GRSGE 229
                                  G     + HV D+   HI A++           +   
Sbjct: 243 TIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFS 302

Query: 230 RYLL-TGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYP 288
            + L T    S  ++ ++A   TG   P         +    +                 
Sbjct: 303 VFNLGTSRGYSVREVIEVARKTTGHPIPVRECGRREGDPAYLVA---------------- 346

Query: 289 TVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQE 321
                      +  KA+  LG+ P+    E + E
Sbjct: 347 -----------ASDKAREVLGWKPKYDTLEAIME 369

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 54.6 bits (129), Expect = 6e-09
 Identities = 52/370 (14%), Positives = 95/370 (25%), Gaps = 49/370 (13%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRA---LVRRTSDISGLPSEGA------------ 45
            +++V G  GY G      L K+ + V     LVRR  D                     
Sbjct: 2   SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRW 61

Query: 46  -------LELVYGDVTDYRSLVDA-------CFGCHVIFHTAALVEPWLPDPSRFFAVNV 91
                  +EL  GD+ D+  L ++                +A                NV
Sbjct: 62  KALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNV 121

Query: 92  EGLKNVVQAAKETKTVEKIIYTSS-----------FFALGSTDGYIADENQVHEEKYFCT 140
            G  NV+ A KE      ++   +                +       +   + ++    
Sbjct: 122 IGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSF 181

Query: 141 QYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIG 200
            +      +  IA    + G+    +  GV+YG     T           ++      + 
Sbjct: 182 YHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALN 241

Query: 201 YGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCI 260
               + +  H   V              +         +         V    +      
Sbjct: 242 RFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQ--FS 299

Query: 261 PLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAY--SCVKAKTELGYNPR-SLKE 317
              L      +    S++   +  ++ P   V A +  Y     K   ELG  P      
Sbjct: 300 VNELAS---LVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLM-ELGLEPHYLSDS 355

Query: 318 GLQEVLPWLR 327
            L  +L +  
Sbjct: 356 LLDSLLNFAV 365

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 49.6 bits (116), Expect = 2e-07
 Identities = 53/329 (16%), Positives = 98/329 (29%), Gaps = 29/329 (8%)

Query: 3   ILVSGASGYLGGRLCHALLKQGH----SVRALVRRTSDISGLPSEGALELVYGDVTDYRS 58
           I+V+G +G++G  +  AL  +G      V  L   T  ++ +    A  +   D      
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIM 61

Query: 59  LVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA 118
             +       IFH  A       D       N +  K ++    E +       +++ + 
Sbjct: 62  AGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYG 121

Query: 119 LGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLT 178
             ++D   + E +     Y  +++   + V   +    +           G   G     
Sbjct: 122 GRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSM 181

Query: 179 TGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTGENA 238
                              + G  N +  F +V DV D ++  +E G SG   L TG   
Sbjct: 182 ASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFNLGTGRAE 241

Query: 239 SFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWA 298
           SF  + D         +  +                       +P          A   A
Sbjct: 242 SFQAVADATLAYHKKGQIEY-----------------------IPFPDKLKGRYQAFTQA 278

Query: 299 YSCVKAKTELGYNPR-SLKEGLQEVLPWL 326
                 +      P  ++ EG+ E + WL
Sbjct: 279 -DLTNLRAAGYDKPFKTVAEGVTEYMAWL 306

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.1 bits (114), Expect = 4e-07
 Identities = 34/183 (18%), Positives = 60/183 (32%), Gaps = 16/183 (8%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-GALELVYGDVTDYRSL- 59
           + LV+GA   +G     AL   G  V A+ R  SD+  L  E   +E V  D+ D+ +  
Sbjct: 7   RALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATE 66

Query: 60  --------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKII 111
                   VD       +      +E       R F+VN+  +  V Q          + 
Sbjct: 67  KALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVP 126

Query: 112 YTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVI 171
            +    +         +       K   T   ++      +A++     + +  V P V+
Sbjct: 127 GSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKA------MAMELGPHKIRVNSVNPTVV 180

Query: 172 YGP 174
              
Sbjct: 181 LTD 183

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.7 bits (113), Expect = 6e-07
 Identities = 35/205 (17%), Positives = 65/205 (31%), Gaps = 18/205 (8%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-GALELVYGDVTDYRSL- 59
           ++LV+GA   +G     AL   G  V A+ R  +D+  L  E   +E V  D+ D+ +  
Sbjct: 9   RVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATE 68

Query: 60  --------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKII 111
                   VD       +      +E       R F VN+  +  V Q          + 
Sbjct: 69  RALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVP 128

Query: 112 YTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPGVI 171
                 +   +   + + +     K       +       +AL+     + +  V P V+
Sbjct: 129 GAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKV------MALELGPHKIRVNAVNPTVV 182

Query: 172 YGPGKLTTGNLVAKLMIERFNGRLP 196
                +           +    R+P
Sbjct: 183 MTS--MGQATWSDPHKAKTMLNRIP 205

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 45.8 bits (108), Expect = 3e-06
 Identities = 30/190 (15%), Positives = 52/190 (27%), Gaps = 32/190 (16%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL------PSEGALELVYGDVTD 55
            ++   A G +G      L+K+      ++ R  + + L        +  +     DVT 
Sbjct: 7   NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTV 66

Query: 56  YRSLVDACF----------GCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK 105
             +                   +                R  A+N  GL N   A  +  
Sbjct: 67  PVAESKKLLKKIFDQLKTVDILINGAGILDDHQI----ERTIAINFTGLVNTTTAILDFW 122

Query: 106 TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIALQAASEGL 161
              K         + S  G+ A              Y  SKA      + +A  A   G+
Sbjct: 123 DKRKGGPGGIIANICSVTGFNAIHQVPV--------YSASKAAVVSFTNSLAKLAPITGV 174

Query: 162 PIVPVYPGVI 171
               + PG+ 
Sbjct: 175 TAYSINPGIT 184

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 45.2 bits (107), Expect = 4e-06
 Identities = 34/190 (17%), Positives = 57/190 (30%), Gaps = 29/190 (15%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSL-- 59
            +LV+G +  +G  +  A  ++G  V AL     +   +           D+ D R    
Sbjct: 7   GVLVTGGARGIGRAIAQAFAREGALV-ALCDLRPEGKEVAEAIGGAFFQVDLEDERERVR 65

Query: 60  -----------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVE 108
                      VD       I    + +   LP+  R   VN+    ++   A       
Sbjct: 66  FVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV 125

Query: 109 KIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIALQAASEGLPIV 164
                     + S  G  A++            Y  SK     +   +AL  A   + + 
Sbjct: 126 GGGA---IVNVASVQGLFAEQENAA--------YNASKGGLVNLTRSLALDLAPLRIRVN 174

Query: 165 PVYPGVIYGP 174
            V PG I   
Sbjct: 175 AVAPGAIATE 184

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (105), Expect = 6e-06
 Identities = 19/146 (13%), Positives = 40/146 (27%), Gaps = 21/146 (14%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-----GALELVYGDVTDYR 57
           +L++GA   +G    +   K    +         +    ++       +     D ++  
Sbjct: 10  VLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNRE 69

Query: 58  SL-------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAA--- 101
            +             V        + +T+ L     P   + F VNV       +A    
Sbjct: 70  DIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPA 129

Query: 102 KETKTVEKIIYTSSFFALGSTDGYIA 127
                   I+  +S     S    +A
Sbjct: 130 MTKNNHGHIVTVASAAGHVSVPFLLA 155

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.2 bits (104), Expect = 8e-06
 Identities = 34/142 (23%), Positives = 50/142 (35%), Gaps = 25/142 (17%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-------GALELVYGDVTD 55
            LV+GASG +G  +  AL++QG  V    R   +I  L +E       G L     D+++
Sbjct: 13  ALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN 72

Query: 56  YRSL-------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAA- 101
              +             VD C     +     L+          F VNV  L    + A 
Sbjct: 73  EEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAY 132

Query: 102 ---KETKTVE-KIIYTSSFFAL 119
              KE    +  II  +S    
Sbjct: 133 QSMKERNVDDGHIININSMSGH 154

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 44.1 bits (103), Expect = 8e-06
 Identities = 36/233 (15%), Positives = 73/233 (31%), Gaps = 35/233 (15%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVR--ALVRRTSDISGLPSE--GALELVYGDVTDYRS 58
           ++V+GA+  +G  L   L+K  +     A  R     + L S     + ++   VT  +S
Sbjct: 6   VVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKS 65

Query: 59  L---------------VDACFGCHVIFHT-AALVEPWLPDPSRFFAVNVEGLKNVVQAA- 101
           L               +        +  +     EP     +    VN   +  + Q   
Sbjct: 66  LDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLL 125

Query: 102 ------KETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADK 151
                    ++ +++  + +     S+      +N     ++    Y  SKA        
Sbjct: 126 PLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRT 185

Query: 152 IALQAASEGLPIVPVYPGVI----YGPGKLTTGNLVAKLMIERFNGRLPGYIG 200
           +A+    + + +V   PG +     G     T       +I  FN     + G
Sbjct: 186 LAVDLKDDNVLVVNFCPGWVQTNLGGKNAALTVEQSTAELISSFNKLDNSHNG 238

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 42.9 bits (100), Expect = 2e-05
 Identities = 36/187 (19%), Positives = 59/187 (31%), Gaps = 21/187 (11%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSL- 59
            L++G++  +G     A +++G  V              +E   A   +  DVTD  S+ 
Sbjct: 8   ALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASID 67

Query: 60  ------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV 107
                       +D       +F  A +VE       R FA+NV G   ++QA       
Sbjct: 68  RCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIA 127

Query: 108 EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVY 167
                     A  +     A        K       +S        L     G+ +  + 
Sbjct: 128 GGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQS------AGLNLIRHGINVNAIA 181

Query: 168 PGVIYGP 174
           PGV+ G 
Sbjct: 182 PGVVDGE 188

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (99), Expect = 4e-05
 Identities = 30/182 (16%), Positives = 57/182 (31%), Gaps = 16/182 (8%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSV-------RALVRRTSDISGLPSEGALELVYGDVTD 55
            LV+GA+  +G     ALL +G  V        A V+  + +           +  DV D
Sbjct: 6   ALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD 65

Query: 56  YRSL------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEK 109
            + L      V   FG   I    A V     +  +   +N+  + +      +  + + 
Sbjct: 66  QQQLRDTFRKVVDHFGRLDILVNNAGVNNE-KNWEKTLQINLVSVISGTYLGLDYMSKQN 124

Query: 110 IIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVPVYPG 169
                    + S  G +    Q                 +  +A    + G+ +  + PG
Sbjct: 125 GGEGGIIINMSSLAGLMPVAQQPV--YCASKHGIVGFTRSAALAANLMNSGVRLNAICPG 182

Query: 170 VI 171
            +
Sbjct: 183 FV 184

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.1 bits (96), Expect = 8e-05
 Identities = 30/193 (15%), Positives = 56/193 (29%), Gaps = 35/193 (18%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-GALELVYGDVTDYRSL-- 59
           ++V+G    +G  +  A +  G  V    +  S    L  E      +  DVT    +  
Sbjct: 9   VVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKT 68

Query: 60  -----------VDACFGCHVIFHTAALVEP-WLPDPSRFFAVNVEGLKNVVQAAKET--K 105
                      +D               E        +   +N+ G   + + A     K
Sbjct: 69  LVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRK 128

Query: 106 TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIALQAASEGL 161
           +   +I  SS          +               Y  +K     +   +AL  +  G+
Sbjct: 129 SQGNVINISSLVGAIGQAQAVP--------------YVATKGAVTAMTKALALDESPYGV 174

Query: 162 PIVPVYPGVIYGP 174
            +  + PG I+ P
Sbjct: 175 RVNCISPGNIWTP 187

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 41.1 bits (95), Expect = 1e-04
 Identities = 36/194 (18%), Positives = 60/194 (30%), Gaps = 15/194 (7%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
           +LV+G +G +GG++   L ++G     LV R    SG  ++GA ELV            A
Sbjct: 12  VLVTGGTGGVGGQIARWLARRGAPHLLLVSR----SGPDADGAGELVAELEALGARTTVA 67

Query: 63  CFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGST 122
                       L+     D       +     +       T    +    +      + 
Sbjct: 68  ACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNL 127

Query: 123 DGYIADENQVHEEKYFCTQ----------YERSKAVADKIALQAASEGLPIVPVYPGVIY 172
                + +      +              Y    A  D +A Q  S+GLP   V  G   
Sbjct: 128 HELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWA 187

Query: 173 GPGKLTTGNLVAKL 186
           G G +  G +  + 
Sbjct: 188 GSG-MAEGPVADRF 200

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 40.8 bits (95), Expect = 1e-04
 Identities = 30/191 (15%), Positives = 63/191 (32%), Gaps = 26/191 (13%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-----GALELVYGDVTDY- 56
            LV+G S  +G  +   L   G SV    R   +++   ++       +E    D++   
Sbjct: 11  ALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRS 70

Query: 57  --RSLVDAC---FGCHV--------IFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKE 103
             + L++     F   +        I       +  + D S   ++N E   ++   A  
Sbjct: 71  ERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHP 130

Query: 104 TKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPI 163
                +     +   + S  G +A   +      +         +   +A + A + + +
Sbjct: 131 FLKASERG---NVVFISSVSGALAVPYE----AVYGATKGAMDQLTRCLAFEWAKDNIRV 183

Query: 164 VPVYPGVIYGP 174
             V PGVI   
Sbjct: 184 NGVGPGVIATS 194

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 40.8 bits (95), Expect = 1e-04
 Identities = 24/147 (16%), Positives = 48/147 (32%), Gaps = 22/147 (14%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSL- 59
           +L++G +  LG  L    + +G  V  L +    ++ L ++    +  + GDV       
Sbjct: 8   VLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQK 67

Query: 60  ------------VDACFGCHVIFHTAALVEP-----WLPDPSRFFAVNVEGLKNVVQAAK 102
                       +D       I+  +  +               F +NV+G  + V+A  
Sbjct: 68  QAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACL 127

Query: 103 ETKTVEK--IIYTSSFFALGSTDGYIA 127
                 +  +I+T S        G   
Sbjct: 128 PALVASRGNVIFTISNAGFYPNGGGPL 154

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 39.7 bits (92), Expect = 3e-04
 Identities = 31/192 (16%), Positives = 61/192 (31%), Gaps = 27/192 (14%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-----ISGLPSEGALELVYGDVTDYR 57
            +++G +G +G       ++ G  V  +     D      + + S   +  V+ DVT   
Sbjct: 9   AIITGGAGGIGETTAKLFVRYGAKV-VIADIADDHGQKVCNNIGSPDVISFVHCDVTKDE 67

Query: 58  SL-------------VDACFGCHVIFHTA--ALVEPWLPDPSRFFAVNVEGLKNVVQAAK 102
            +             +D  FG   +  T   +++E    D  R   +NV G   V + A 
Sbjct: 68  DVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAA 127

Query: 103 ETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLP 162
                 K        ++ S        +     K+       S      +  +    G+ 
Sbjct: 128 RVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTS------LCTELGEYGIR 181

Query: 163 IVPVYPGVIYGP 174
           +  V P ++  P
Sbjct: 182 VNCVSPYIVASP 193

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 39.3 bits (91), Expect = 4e-04
 Identities = 33/213 (15%), Positives = 61/213 (28%), Gaps = 27/213 (12%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE------GALELVYGDVTDY 56
           ++++G+S  LG  +      +   V    R   D +    E      G    V GDVT  
Sbjct: 10  VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVE 69

Query: 57  RSL-------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKE 103
             +             +D       + +  +  E  L D ++    N+ G     + A +
Sbjct: 70  SDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIK 129

Query: 104 TKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPI 163
                 I  T    +                 K        +      +AL+ A +G+ +
Sbjct: 130 YFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTET------LALEYAPKGIRV 183

Query: 164 VPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLP 196
             + PG I  P  +                 +P
Sbjct: 184 NNIGPGAINTP--INAEKFADPEQRADVESMIP 214

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 39.0 bits (90), Expect = 4e-04
 Identities = 29/200 (14%), Positives = 60/200 (30%), Gaps = 38/200 (19%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALV-------RRTSDISGLPSE-----GALELVY 50
           +L++GA   +G  +     +                R  +D+  +  E        + + 
Sbjct: 4   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTIT 63

Query: 51  GDVTDYRSL-------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNV 97
            D++D   +             +D       +    AL +    D       N++G   +
Sbjct: 64  ADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFL 123

Query: 98  VQAAKETKTVEK---IIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIAL 154
            QA       +    I + +S  A  +                +C      + + + + L
Sbjct: 124 TQALFALMERQHSGHIFFITSVAATKAFRHSSI----------YCMSKFGQRGLVETMRL 173

Query: 155 QAASEGLPIVPVYPGVIYGP 174
            A    + I  V PG +Y P
Sbjct: 174 YARKCNVRITDVQPGAVYTP 193

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} Length = 128

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 37.2 bits (86), Expect = 6e-04
 Identities = 19/119 (15%), Positives = 38/119 (31%), Gaps = 14/119 (11%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLV 60
           MK  + G SG +G  +     ++GH +   V           +  ++    +       +
Sbjct: 1   MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEELDSPDVVIDFSSPEALPKTVDL 60

Query: 61  DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL 119
              +   ++  T AL E              E L+ + + +KE   V+    T      
Sbjct: 61  CKKYRAGLVLGTTALKE--------------EHLQMLRELSKEVPVVQAYSRTVFAIGA 105

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 38.1 bits (88), Expect = 7e-04
 Identities = 16/117 (13%), Positives = 40/117 (34%), Gaps = 19/117 (16%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-----SGLPSEGALELVYGDVTDYR 57
            +++G +  +G  +    +++G  V  +  R SD+       + +   ++    D +D  
Sbjct: 9   AIITGGTLGIGLAIATKFVEEGAKV-MITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDED 67

Query: 58  SL-------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAA 101
                          V        I    ++ E    +  +  AVN++G+    +  
Sbjct: 68  GWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLG 124

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 38.0 bits (88), Expect = 7e-04
 Identities = 32/189 (16%), Positives = 57/189 (30%), Gaps = 25/189 (13%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSL- 59
            LV+G +  +G  +   LL +G  V       +    L +E       V  DV+      
Sbjct: 9   ALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWT 68

Query: 60  ------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV 107
                       ++       I     +    L D SR   +N E +    Q        
Sbjct: 69  LVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKE 128

Query: 108 EK--IIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIVP 165
               II  +S  +    + Y          K   +   R+ A+    + +     + +  
Sbjct: 129 TGGSIINMASVSSWLPIEQYAG----YSASKAAVSALTRAAAL----SCRKQGYAIRVNS 180

Query: 166 VYPGVIYGP 174
           ++P  IY P
Sbjct: 181 IHPDGIYTP 189

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 37.7 bits (87), Expect = 0.001
 Identities = 36/207 (17%), Positives = 67/207 (32%), Gaps = 28/207 (13%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSL- 59
            LVSG +  +G     A++ +G  V        +   + +E   A   V+ DVT      
Sbjct: 9   ALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWK 68

Query: 60  ------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKET--- 104
                       +        I +   + +  L +  R   VN+ G+   ++A  +    
Sbjct: 69  AAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKE 128

Query: 105 KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPIV 164
                II  SS   L  T             K+      +S       AL+    G+ + 
Sbjct: 129 AGRGSIINISSIEGLAGTVACHGY----TATKFAVRGLTKS------TALELGPSGIRVN 178

Query: 165 PVYPGVIYGPGKLTTGNLVAKLMIERF 191
            ++PG++  P        + +  + R 
Sbjct: 179 SIHPGLVKTPMTDWVPEDIFQTALGRA 205

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 37.3 bits (86), Expect = 0.001
 Identities = 32/211 (15%), Positives = 62/211 (29%), Gaps = 38/211 (18%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSL- 59
           ++++G +  LG       +  G  V        + +    E   A    + DVT      
Sbjct: 8   VIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQ 67

Query: 60  ------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAA----KE 103
                       VD       I     L    +    +   +N+ G+   ++      K+
Sbjct: 68  RVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKD 127

Query: 104 TKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIALQAASE 159
                 I+  SS   L       +              Y  SK     ++   A++  ++
Sbjct: 128 AGGG-SIVNISSAAGLMGLALTSS--------------YGASKWGVRGLSKLAAVELGTD 172

Query: 160 GLPIVPVYPGVIYGPGKLTTGNLVAKLMIER 190
            + +  V+PG+ Y P    TG    +     
Sbjct: 173 RIRVNSVHPGMTYTPMTAETGIRQGEGNYPN 203

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 37.7 bits (87), Expect = 0.001
 Identities = 33/200 (16%), Positives = 54/200 (27%), Gaps = 45/200 (22%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELV------------- 49
           +LV+GA G LG     A  ++G  V                 A + V             
Sbjct: 10  VLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVA 69

Query: 50  -YGDVTDYRSLV----------DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVV 98
            Y  V     LV          D       I    +       D      V++ G   V 
Sbjct: 70  NYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVT 129

Query: 99  QAAKETKTVEK---IIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADK 151
           +AA +    +    II T+S   +    G                 Y  +K     +A+ 
Sbjct: 130 RAAWDHMKKQNYGRIIMTASASGIYGNFGQAN--------------YSAAKLGLLGLANT 175

Query: 152 IALQAASEGLPIVPVYPGVI 171
           + ++     +    + P   
Sbjct: 176 LVIEGRKNNIHCNTIAPNAG 195

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Length = 144

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 36.1 bits (83), Expect = 0.001
 Identities = 28/119 (23%), Positives = 36/119 (30%), Gaps = 9/119 (7%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP------SEGALELVYGDVTD 55
           K+ V GASG +G  L   LLK    V  L     DI+  P      S             
Sbjct: 2   KVAVLGASGGIGQPLSL-LLKNSPLVSRLTLY--DIAHTPGVAADLSHIETRATVKGYLG 58

Query: 56  YRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
              L D   GC V+   A +           F  N   +  +  A  +      I   S
Sbjct: 59  PEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS 117

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 37.0 bits (85), Expect = 0.002
 Identities = 34/207 (16%), Positives = 67/207 (32%), Gaps = 30/207 (14%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSL- 59
            LV+GAS  +G  +   L  +G  V       +    +        + +  +VTD  S+ 
Sbjct: 7   ALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIE 66

Query: 60  ------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV 107
                       VD       I     L+     + +     N+  +  + +A       
Sbjct: 67  SVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMK 126

Query: 108 EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA----VADKIALQAASEGLPI 163
           ++         +GS  G + +  Q +        Y  +KA     +  +A + AS G+ +
Sbjct: 127 KR---HGRIITIGSVVGTMGNGGQAN--------YAAAKAGLIGFSKSLAREVASRGITV 175

Query: 164 VPVYPGVIYGPGKLTTGNLVAKLMIER 190
             V PG I         +     ++ +
Sbjct: 176 NVVAPGFIETDMTRALSDDQRAGILAQ 202

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} Length = 145

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 36.1 bits (83), Expect = 0.002
 Identities = 32/120 (26%), Positives = 46/120 (38%), Gaps = 8/120 (6%)

Query: 1   MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALEL------VYGDVT 54
           MK+ V GA+G +G  L   L  Q  S   L     DI+ +    A++L      V     
Sbjct: 1   MKVAVLGAAGGIGQALALLLKTQLPSGSELSL--YDIAPVTPGVAVDLSHIPTAVKIKGF 58

Query: 55  DYRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS 114
                  A  G  V+  +A +      D S  F VN   +KN+VQ   +T     I   +
Sbjct: 59  SGEDATPALEGADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT 118

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (85), Expect = 0.002
 Identities = 32/217 (14%), Positives = 63/217 (29%), Gaps = 31/217 (14%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE----------GALELVYGD 52
            +V+G +  +G  +   LL+ G +V    R+   +     E            +  +  +
Sbjct: 15  AIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCN 74

Query: 53  VTDY---RSLVDAC---FGCHVIF-------HTAALVEPWLPDPSRFFAVNVEGLKNVVQ 99
           + +     +LV +    FG              +                N+ G   + +
Sbjct: 75  IRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCK 134

Query: 100 AAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASE 159
           A   +   E      +      T             +       +S      +AL+ A  
Sbjct: 135 AVYSSWMKEHGGSIVNIIV--PTKAGFPLAVHSGAARAGVYNLTKS------LALEWACS 186

Query: 160 GLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLP 196
           G+ I  V PGVIY    +       +   E    ++P
Sbjct: 187 GIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIP 223

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.5 bits (84), Expect = 0.002
 Identities = 27/192 (14%), Positives = 55/192 (28%), Gaps = 26/192 (13%)

Query: 2   KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-----GALELVYGDVTDY 56
            +LV+G +  +G  +       G  +    R   +++   S+       +     D +  
Sbjct: 10  TVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLR 69

Query: 57  RSL--------------VDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAK 102
                            +D          +   ++    D S   + N+E   ++ Q A 
Sbjct: 70  PEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAH 129

Query: 103 ETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLP 162
                          ++          +     K    Q  R+      +A + AS+G+ 
Sbjct: 130 PLLKASGCGNIIFMSSIAGVVSAS-VGSIYSATKGALNQLARN------LACEWASDGIR 182

Query: 163 IVPVYPGVIYGP 174
              V P VI  P
Sbjct: 183 ANAVAPAVIATP 194

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 36.3 bits (83), Expect = 0.003
 Identities = 38/189 (20%), Positives = 55/189 (29%), Gaps = 30/189 (15%)

Query: 3   ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA 62
            LV+G +  LG     AL  +G+ V  L  R            L  V GDVT    +  A
Sbjct: 4   ALVTGGASGLGRAAALALKARGYRVVVLDLR-------REGEDLIYVEGDVTREEDVRRA 56

Query: 63  CFGCHVIFHTAALV----------------EPWLPDPSRFFAVNVEGLKNVVQAA---KE 103
                      A+V                   L    R   VN+ G  NV++ A     
Sbjct: 57  VARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMR 116

Query: 104 TKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGLPI 163
               +            S   +     Q      +        A+    A + A  G+ +
Sbjct: 117 ENPPDAEGQRGVIVNTASVAAFEGQIGQAA----YAASKGGVVALTLPAARELAGWGIRV 172

Query: 164 VPVYPGVIY 172
           V V PG+  
Sbjct: 173 VTVAPGLFD 181

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	334
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	100.0
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	100.0
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	100.0
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	100.0
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	100.0
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	100.0
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	100.0
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	100.0
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	100.0
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	100.0
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	100.0
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	100.0
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.97
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.97
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.97
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.97
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.95
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.95
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.94
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.85
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.85
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.83
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.83
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.83
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.83
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.83
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.83
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.83
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.82
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.82
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.82
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.81
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.81
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.81
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.81
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.81
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.81
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.81
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.8
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.8
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.8
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.8
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.8
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.8
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.8
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.8
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.8
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.79
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.78
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.78
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.77
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.77
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.77
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.77
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.76
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.76
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.75
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.75
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.75
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.75
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.74
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.74
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.74
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.73
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.72
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.72
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.72
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.71
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.7
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.69
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.69
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.68
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.68
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.67
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.65
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.59
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.59
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.57
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.57
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.54
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.52
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.47
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.46
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.41
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.29
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.1
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.74
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.55
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.42
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.4
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.27
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	98.2
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.13
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	98.08
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	98.07
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	98.06
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	98.06
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.04
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.97
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.95
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.94
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.94
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.8
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.8
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.77
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.75
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	97.72
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.71
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.71
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.71
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	97.69
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.68
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.65
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.65
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.62
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.6
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.53
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.51
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	97.47
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.4
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.39
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	97.38
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.37
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.33
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.32
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.26
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.15
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.12
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.11
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	97.09
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.03
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	96.96
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	96.92
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.92
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.9
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	96.79
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	96.78
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	96.75
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.75
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.74
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.71
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.7
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	96.68
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	96.62
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	96.51
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.49
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	96.46
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	96.38
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	96.37
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	96.36
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	96.24
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	96.19
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	96.18
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.17
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.11
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.08
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	95.94
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.88
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	95.81
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.8
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	95.76
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	95.73
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	95.56
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.45
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	95.39
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	95.37
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	95.34
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	95.33
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	95.29
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	95.23
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	95.23
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.18
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.11
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	95.1
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	95.1
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	95.09
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	95.09
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	95.08
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	95.08
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.04
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	95.04
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	94.98
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	94.94
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	94.84
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	94.81
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	94.74
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.73
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	94.71
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	94.62
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	94.6
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	94.56
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	94.53
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	94.51
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	94.5
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	94.38
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	94.36
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	94.27
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.23
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	94.14
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	94.03
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	93.94
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	93.91
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	93.89
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	93.89
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	93.84
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	93.82
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	93.75
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	93.69
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	93.54
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	93.52
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	93.51
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	93.5
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.44
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	93.39
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	93.26
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	93.19
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	93.16
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	93.11
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	93.02
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	93.01
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	93.0
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	92.92
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	92.92
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	92.81
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	92.75
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	92.67
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	92.58
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	92.51
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	92.24
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	92.15
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	91.76
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	91.74
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	91.71
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	91.61
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	91.52
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	91.39
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	91.19
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	91.14
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	91.04
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	91.0
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	90.88
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	90.7
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	90.68
d1vkza2	90	Glycinamide ribonucleotide synthetase (GAR-syn), N	90.48
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	90.45
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	90.4
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	90.2
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.05
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	89.94
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	89.94
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	89.91
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	89.87
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	89.72
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	89.52
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	89.4
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	89.32
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	89.28
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	88.56
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	88.31
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	88.06
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	87.68
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	87.68
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	87.66
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.57
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	86.88
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	86.82
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	86.72
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	86.71
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	86.19
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	85.76
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	84.76
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	84.58
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	84.13
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	84.11
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	83.57
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	83.56
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	83.54
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	83.44
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	83.04
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	82.83
d1rrva_	401	TDP-vancosaminyltransferase GftD {Amycolatopsis or	81.93
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	81.58
d1iira_	401	UDP-glucosyltransferase GtfB {Amycolatopsis orient	81.52
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	81.1
d1rzua_	477	Glycogen synthase 1, GlgA {Agrobacterium tumefacie	80.32
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	80.17

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=4.8e-52  Score=366.31  Aligned_cols=298  Identities=24%  Similarity=0.330  Sum_probs=248.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEE------EEcCCCC-----CCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRA------LVRRTSD-----ISGLPSEGALELVYGDVTDYRSLVDACFGCHVI   69 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~------~~r~~~~-----~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~v   69 (334)
                      |||||||||||||++|+++|+++|++|.+      +++....     ...+....+++++.+|+.+.........++|+|
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v   80 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccceE
Confidence            99999999999999999999999986544      3332111     112223347999999999999999999999999


Q ss_pred             EEeccccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHH
Q 019878           70 FHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (334)
Q Consensus        70 ih~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~  147 (334)
                      +|+|+....  ...++...+++|+.++.+++++|.+. ++++||++||.++||.....+.+|+.+..|   .++|+.+|.
T Consensus        81 i~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p---~~~Y~~sK~  156 (322)
T d1r6da_          81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDA-GVGRVVHVSTNQVYGSIDSGSWTESSPLEP---NSPYAASKA  156 (322)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHT-TCCEEEEEEEGGGGCCCSSSCBCTTSCCCC---CSHHHHHHH
T ss_pred             EeecccccccccccchHHHhhhhHHHHHHHHHHHHHc-CCceEEEeecceeecCCCCCCCCCCCCCCC---CCHHHHHHH
Confidence            999986332  34567788899999999999999998 689999999999999888777777776554   589999999


Q ss_pred             HHHHHHHHHhh-cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC
Q 019878          148 VADKIALQAAS-EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR  226 (334)
Q Consensus       148 ~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~  226 (334)
                      ++|.+++.+.+ ++++++++||+++|||++.. .++++.++.++..+++..++++|++.|+|+|++|+|+++..+++++.
T Consensus       157 ~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~-~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~  235 (322)
T d1r6da_         157 GSDLVARAYHRTYGLDVRITRCCNNYGPYQHP-EKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR  235 (322)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECEEECTTCCT-TSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHhCCCEEEEEeeeEECcCCCc-CcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCCC
Confidence            99999999875 69999999999999998653 46788888889999988889999999999999999999999999988


Q ss_pred             CCCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHH
Q 019878          227 SGERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAK  305 (334)
Q Consensus       227 ~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~  305 (334)
                      .+++||++ ++..++.|+++.+.+.+|.+.+.....                  ...+        .......+|++|++
T Consensus       236 ~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~------------------~~~~--------~~~~~~~~d~~k~~  289 (322)
T d1r6da_         236 AGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKV------------------ADRK--------GHDLRYSLDGGKIE  289 (322)
T ss_dssp             TTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEE------------------CCCT--------TCCCBCCBCCHHHH
T ss_pred             CCCeeEEeecccchhHHHHHHHHHHhCCCccceeec------------------CCCC--------CCCceeeeCHHHHH
Confidence            89999996 688999999999999999875543211                  0111        01123457999999


Q ss_pred             HhcCCCCC-CHHHHHHHHHHHHHhc
Q 019878          306 TELGYNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       306 ~~lG~~p~-~~~e~i~~~~~~~~~~  329 (334)
                      +.|||+|+ +++|+|+++++||+++
T Consensus       290 ~~lg~~p~~~~eegI~~~i~w~~~n  314 (322)
T d1r6da_         290 RELGYRPQVSFADGLARTVRWYREN  314 (322)
T ss_dssp             HHHCCCCCSCHHHHHHHHHHHHHHC
T ss_pred             HHHCCCCCCCHHHHHHHHHHHHHHh
Confidence            99999999 9999999999999875

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=9.2e-51  Score=363.12  Aligned_cols=309  Identities=18%  Similarity=0.279  Sum_probs=241.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEE-EEcCCCC-----CCCCCCCCCeEEEEcCCCChhhHHHHhc--CCCEEEEe
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRA-LVRRTSD-----ISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHT   72 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~-~~r~~~~-----~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vih~   72 (334)
                      |||||||||||||++|+++|+++|++|++ +++....     ...+...++++++.+|++|.+.+.++++  ++|+||||
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   80 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence            99999999999999999999999987555 4432221     2233444689999999999999999886  48999999


Q ss_pred             ccccCC--CCCCcccchhhhhHHHHHHHHHHHhcC--------CCcEEEEecccceeccCCCccCCCCCc-------ccc
Q 019878           73 AALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETK--------TVEKIIYTSSFFALGSTDGYIADENQV-------HEE  135 (334)
Q Consensus        73 a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~--------~~~~~v~~Ss~~v~~~~~~~~~~e~~~-------~~~  135 (334)
                      ||....  +..++..++++|+.++.+++++|.+.+        ++++||++||..|||.....+..|...       ..+
T Consensus        81 Aa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~  160 (361)
T d1kewa_          81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA  160 (361)
T ss_dssp             CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred             ccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCCC
Confidence            997442  345778899999999999999998762        245999999999999776544333221       122


Q ss_pred             ccccChHHHHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          136 KYFCTQYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       136 ~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      ..|.+.||.+|.++|.++..+.+ +|++++++||+++|||+... .++++.++.++..|+++.++++|++.|+|+|++|+
T Consensus       161 ~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~-~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~  239 (361)
T d1kewa_         161 YAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFP-EKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH  239 (361)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCT-TSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCc-CcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHHH
Confidence            23568899999999999999875 69999999999999998653 45788888889999988889999999999999999


Q ss_pred             HHHHHHHhhcCCCCCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHh
Q 019878          215 VDGHIAAMEKGRSGERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVL  293 (334)
Q Consensus       215 a~a~~~~~~~~~~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (334)
                      |+++..++++...+++||++ ++..++.|+++.+.+..+...+.........           ...+..+        ..
T Consensus       240 a~ai~~~~~~~~~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~-----------~~~~~~~--------~~  300 (361)
T d1kewa_         240 ARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQI-----------TYVADRP--------GH  300 (361)
T ss_dssp             HHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGE-----------EEECCCT--------TC
T ss_pred             HHHHHHHHhcCCCCCeEEECCCCCcchHHHHhHhhhhcccccccccCcccce-----------eecCCCC--------CC
Confidence            99999999998889999996 6789999999999987654332211000000           0000010        01


Q ss_pred             hccceechHHHHHhcCCCCC-CHHHHHHHHHHHHHhc
Q 019878          294 AHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       294 ~~~~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~  329 (334)
                      ...+.+|++|++++|||+|+ +++|+|+++++||+++
T Consensus       301 ~~~~~~d~~k~~~~lgw~P~~~l~e~i~~ti~w~~~n  337 (361)
T d1kewa_         301 DRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLAN  337 (361)
T ss_dssp             CCBCCBCCHHHHHHHCCCCSCCHHHHHHHHHHHHHHC
T ss_pred             CceeeeCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHh
Confidence            23345799999999999999 9999999999999875

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.2e-48  Score=349.00  Aligned_cols=317  Identities=18%  Similarity=0.163  Sum_probs=234.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC-----CCC-----CCCCCCeEEEEcCCCChhhHHHHhcC--CCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-----ISG-----LPSEGALELVYGDVTDYRSLVDACFG--CHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~-----~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~v   69 (334)
                      ++||||||||||++|+++|+++|++|++++|....     ...     ....++++++.+|++|.+++.+++++  +|+|
T Consensus         3 ~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   82 (357)
T d1db3a_           3 VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEV   82 (357)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCEE
Confidence            58899999999999999999999999999996432     111     11124799999999999999999985  6999


Q ss_pred             EEeccccC--CCCCCcccchhhhhHHHHHHHHHHHhcC--CCcEEEEecccceeccCCCccCCCCCccccccccChHHHH
Q 019878           70 FHTAALVE--PWLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (334)
Q Consensus        70 ih~a~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (334)
                      ||+|+...  .+..++..++++|+.||.+|+++|++.+  +++||||+||.+|||.....+.+|+++..|   .++|+.|
T Consensus        83 ~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P---~~~Y~~s  159 (357)
T d1db3a_          83 YNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYP---RSPYAVA  159 (357)
T ss_dssp             EECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCC---CSHHHHH
T ss_pred             EEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCC---CChHHHH
Confidence            99999843  3556778899999999999999999873  334899999999999877777888776554   5899999


Q ss_pred             HHHHHHHHHHHhh-cCCCEEEEecCceecCCCCC--chhHHHHHHHHHHcCCC-CccccCCCCceeeeeHHHHHHHHHHH
Q 019878          146 KAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLT--TGNLVAKLMIERFNGRL-PGYIGYGNDRFSFCHVDDVVDGHIAA  221 (334)
Q Consensus       146 K~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~D~a~a~~~~  221 (334)
                      |.++|++++.+.+ ++++++++||+++|||+...  ....+...+.....+.. ...+|++++.|+|+|++|+++++..+
T Consensus       160 K~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~  239 (357)
T d1db3a_         160 KLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMM  239 (357)
T ss_dssp             HHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHH
Confidence            9999999999885 69999999999999996432  23345556666665554 44568899999999999999999999


Q ss_pred             hhcCCCCCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHH----------
Q 019878          222 MEKGRSGERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTV----------  290 (334)
Q Consensus       222 ~~~~~~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------  290 (334)
                      +++. .++.||++ |+.+|+.|+++.+.+.+|...+....+.......      ........+...+...          
T Consensus       240 ~~~~-~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~r  312 (357)
T d1db3a_         240 LQQE-QPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIV------VSVTGHDAPGVKPGDVIIAVDPRYFR  312 (357)
T ss_dssp             TSSS-SCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEE------EEECSSSCTTCCTTCEEEEECGGGCC
T ss_pred             HhCC-CCCeEEECCCCceehHHHHHHHHHHhCCccccccccccccchh------hhhhcccccccccCceeEeeccccCC
Confidence            9865 56799995 7889999999999999985433221110000000      0000000010000000          


Q ss_pred             HHhhccceechHHHHHhcCCCCC-CHHHHHHHHHHHHHh
Q 019878          291 HVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRS  328 (334)
Q Consensus       291 ~~~~~~~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~  328 (334)
                      ........+|++|++++|||+|+ +++|+|+++++++++
T Consensus       313 ~~~~~~~~~d~skakk~LGw~P~~sl~egI~~~I~~~l~  351 (357)
T d1db3a_         313 PAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLE  351 (357)
T ss_dssp             CCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred             CccccccccCHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence            00012234699999999999999 999999999876543

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-50  Score=351.58  Aligned_cols=294  Identities=21%  Similarity=0.322  Sum_probs=235.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCC-CCCCC---CCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DISGL---PSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~---~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~   76 (334)
                      .||||||||||||++|+++|+++|++|++++|... ....+   .....+.....|+.     ..++.++|+|||+|+..
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~-----~~~~~~~d~VihlAa~~   76 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV-----EPLYIEVDQIYHLASPA   76 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTT-----SCCCCCCSEEEECCSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHH-----HHHHcCCCEEEECcccC
Confidence            47999999999999999999999999999987432 21111   12124555555543     44556899999999975


Q ss_pred             CC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCcc--ccccccChHHHHHHHHHHH
Q 019878           77 EP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVH--EEKYFCTQYERSKAVADKI  152 (334)
Q Consensus        77 ~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~--~~~~~~~~Y~~sK~~~E~~  152 (334)
                      ..  +..++...+++|+.++.+++++|++. ++ ++||+||.+|||.....+.+|+...  .+..|.++|+.+|.++|.+
T Consensus        77 ~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~-~~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~~  154 (312)
T d2b69a1          77 SPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETM  154 (312)
T ss_dssp             SHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHH
T ss_pred             CchhHHhCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHHHHH
Confidence            42  44677888999999999999999998 44 8999999999998776666665432  2334568999999999999


Q ss_pred             HHHHhh-cCCCEEEEecCceecCCCCCc-hhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCCCCe
Q 019878          153 ALQAAS-EGLPIVPVYPGVIYGPGKLTT-GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGER  230 (334)
Q Consensus       153 ~~~~~~-~g~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g~~  230 (334)
                      ++.+.+ +|++++++||++||||+.... ..+++.++.+++.|+++.+++++.+.|+|+|++|+++++..++++. .+++
T Consensus       155 ~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~-~~~~  233 (312)
T d2b69a1         155 CYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN-VSSP  233 (312)
T ss_dssp             HHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS-CCSC
T ss_pred             HHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhc-cCCc
Confidence            999875 699999999999999986533 4578888889999999988999999999999999999999988765 4568


Q ss_pred             EEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhcC
Q 019878          231 YLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELG  309 (334)
Q Consensus       231 ~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG  309 (334)
                      ||++ |+..++.++++.+.+.+|.+.+....+.                   .+ .       .......|++|++++||
T Consensus       234 ~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-------------------~~-~-------~~~~~~~d~~k~~~~lg  286 (312)
T d2b69a1         234 VNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSE-------------------AQ-D-------DPQKRKPDIKKAKLMLG  286 (312)
T ss_dssp             EEESCCCEEEHHHHHHHHHHHHTCCCCEEEECC-------------------CT-T-------CCCCCCBCCHHHHHHHC
T ss_pred             eEecCCcccchhhHHHHHHHHhCCCCceEECCC-------------------CC-C-------CCCeeeECHHHHHHHHC
Confidence            9995 6889999999999999998876543221                   00 0       01234569999999999


Q ss_pred             CCCC-CHHHHHHHHHHHHHhc
Q 019878          310 YNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       310 ~~p~-~~~e~i~~~~~~~~~~  329 (334)
                      |+|+ +++++|+++++||+++
T Consensus       287 w~p~~~l~~~I~~~i~w~~~~  307 (312)
T d2b69a1         287 WEPVVPLEEGLNKAIHYFRKE  307 (312)
T ss_dssp             CCCCSCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHH
Confidence            9999 9999999999999764

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=9.6e-48  Score=344.23  Aligned_cols=298  Identities=18%  Similarity=0.168  Sum_probs=240.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCC--
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP--   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~--   78 (334)
                      |||||||||||||++|+++|+++|++|+++++....... ......++..+|+.+.+.+.++++++|+|||+|+....  
T Consensus        16 MKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~~~~~~~   94 (363)
T d2c5aa1          16 LKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT-EDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMG   94 (363)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC-GGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh-hhcccCcEEEeechhHHHHHHHhhcCCeEeeccccccccc
Confidence            899999999999999999999999999999886553221 11135789999999999999999999999999987443  


Q ss_pred             -CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCc----cccccccChHHHHHHHHHHHH
Q 019878           79 -WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQV----HEEKYFCTQYERSKAVADKIA  153 (334)
Q Consensus        79 -~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~----~~~~~~~~~Y~~sK~~~E~~~  153 (334)
                       ....+......|+.++.+++++|.+. ++++||++||..+|+.....+.++...    ..+..|.++|+.+|.++|+++
T Consensus        95 ~~~~~~~~~~~~n~~gt~~ll~~~~~~-~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~~E~~~  173 (363)
T d2c5aa1          95 FIQSNHSVIMYNNTMISFNMIEAARIN-GIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELC  173 (363)
T ss_dssp             HHTTCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHH
T ss_pred             ccccccccccccccchhhHHHHhHHhh-CccccccccccccccccccccccccccccccCCcCCCCCHHHHHHHHHHHHH
Confidence             23566778899999999999999998 799999999999999776554444332    223345689999999999999


Q ss_pred             HHHhh-cCCCEEEEecCceecCCCCCc----hhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCCC
Q 019878          154 LQAAS-EGLPIVPVYPGVIYGPGKLTT----GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSG  228 (334)
Q Consensus       154 ~~~~~-~g~~~~ilR~~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g  228 (334)
                      +.+.+ +|++++++||+++||++....    ...................+++|.+.|+|+|++|+++++..++++. .+
T Consensus       174 ~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~~~~-~~  252 (363)
T d2c5aa1         174 KHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD-FR  252 (363)
T ss_dssp             HHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS-CC
T ss_pred             HHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHHhCC-CC
Confidence            99875 599999999999999875322    1122333444556666778899999999999999999999998864 57


Q ss_pred             CeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHh
Q 019878          229 ERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTE  307 (334)
Q Consensus       229 ~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~  307 (334)
                      ++||++ ++.+|+.|+++.+.+.+|.+.++...|.                   ..         ......+|++|+++.
T Consensus       253 ~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i~~~~~-------------------~~---------~~~~~~~d~ska~~~  304 (363)
T d2c5aa1         253 EPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPG-------------------PE---------GVRGRNSDNNLIKEK  304 (363)
T ss_dssp             SCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECC-------------------CC---------CCSBCEECCHHHHHH
T ss_pred             CeEEEecCCcccHHHHHHHHHHHhCCCCceEeCCC-------------------CC---------CccccccCHHHHHHH
Confidence            799995 7889999999999999999877654431                   00         012335799999999


Q ss_pred             cCCCCC-CHHHHHHHHHHHHHhc
Q 019878          308 LGYNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       308 lG~~p~-~~~e~i~~~~~~~~~~  329 (334)
                      |||+|+ +++++|+++++||+++
T Consensus       305 LGw~p~~sleegi~~ti~w~~~~  327 (363)
T d2c5aa1         305 LGWAPNMRLKEGLRITYFWIKEQ  327 (363)
T ss_dssp             HSCCCCCCHHHHHHHHHHHHHHH
T ss_pred             hCCCCCCCHHHHHHHHHHHHHHH
Confidence            999999 9999999999999664

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.2e-48  Score=344.57  Aligned_cols=316  Identities=20%  Similarity=0.265  Sum_probs=244.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHH-HhcCCCEEEEeccccCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD-ACFGCHVIFHTAALVEP   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~-~~~~~d~vih~a~~~~~   78 (334)
                      |||||||||||||++|+++|+++| ++|+++++..+....+...++++++.+|+++.+.+.+ +..++|+|||+|+....
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~~~~   80 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP   80 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCccccccccccc
Confidence            999999999999999999999998 5899999876655555555689999999998876655 66779999999997543


Q ss_pred             --CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCc----cccccccChHHHHHHHHHHH
Q 019878           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQV----HEEKYFCTQYERSKAVADKI  152 (334)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~----~~~~~~~~~Y~~sK~~~E~~  152 (334)
                        +..++...+..|+.++.+++++|.+. + .+++++||..+|+........|...    .+...|.+.|+.+|.++|++
T Consensus        81 ~~~~~~~~~~~~~nv~gt~~ll~~~~~~-~-~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~  158 (342)
T d2blla1          81 IEYTRNPLRVFELDFEENLRIIRYCVKY-R-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRV  158 (342)
T ss_dssp             HHHHHSHHHHHHHHTHHHHHHHHHHHHT-T-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHH
T ss_pred             cccccCCccccccccccccccccccccc-c-ccccccccccccccccccccccccccccccccCCCcchhhhcccchhhh
Confidence              33456678999999999999999997 3 3778899999999776554444332    23334568899999999999


Q ss_pred             HHHHhh-cCCCEEEEecCceecCCCCC-------chhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhc
Q 019878          153 ALQAAS-EGLPIVPVYPGVIYGPGKLT-------TGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEK  224 (334)
Q Consensus       153 ~~~~~~-~g~~~~ilR~~~v~G~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~  224 (334)
                      +..+.+ +|++++++|++.+||+....       ....+..++.+.+.|++..++++|++.|+|+|++|+|+++..++++
T Consensus       159 ~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~~~  238 (342)
T d2blla1         159 IWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIEN  238 (342)
T ss_dssp             HHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHC
T ss_pred             hhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeeeehhh
Confidence            999875 69999999999999985332       2346778888888999999999999999999999999999999987


Q ss_pred             C---CCCCeEEec-CCC-CCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhcccee
Q 019878          225 G---RSGERYLLT-GEN-ASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAY  299 (334)
Q Consensus       225 ~---~~g~~~~i~-g~~-~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (334)
                      +   ..|++||++ ++. +|+.|+++.+.+.+|........|.+......           ......... .........
T Consensus       239 ~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~-~~~~~~~~~  306 (342)
T d2blla1         239 AGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVV-----------ESSSYYGKG-YQDVEHRKP  306 (342)
T ss_dssp             GGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------------------CCCCCB
T ss_pred             ccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccccCccccccee-----------ccccccccc-ccccccccc
Confidence            4   247899995 655 79999999999999987665544321100000           000000000 001123346


Q ss_pred             chHHHHHhcCCCCC-CHHHHHHHHHHHHHhcC
Q 019878          300 SCVKAKTELGYNPR-SLKEGLQEVLPWLRSSG  330 (334)
Q Consensus       300 d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~~  330 (334)
                      |++|++++|||+|+ +++|+|+++++||+++.
T Consensus       307 d~~k~~~~lgw~P~~sleegl~~ti~~y~~~~  338 (342)
T d2blla1         307 SIRNAHRCLDWEPKIDMQETIDETLDFFLRTV  338 (342)
T ss_dssp             CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHS
T ss_pred             CHHHHHHHHCCCcCCCHHHHHHHHHHHHHhCc
Confidence            99999999999999 99999999999998764

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.1e-47  Score=338.63  Aligned_cols=299  Identities=23%  Similarity=0.301  Sum_probs=233.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC-CC-----CCCCeEEEEcCCCChhhHHHHhc--CCCEEEEe
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG-LP-----SEGALELVYGDVTDYRSLVDACF--GCHVIFHT   72 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~-----~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vih~   72 (334)
                      |||||||||||||++|++.|+++|++|++++|....... ++     ..++++++++|++|.+.+.++++  ++|+|||+
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl   80 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence            999999999999999999999999999999874432211 00     11379999999999999999987  69999999


Q ss_pred             ccccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHH
Q 019878           73 AALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVAD  150 (334)
Q Consensus        73 a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E  150 (334)
                      ||....  +..++...+++|+.|+.+++++|++. ++++||++||.++|+.....+..|....  ..+.++|+.+|.++|
T Consensus        81 Aa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~-~v~~~i~~Ss~~vy~~~~~~~~~e~~~~--~~p~~~Y~~sK~~~e  157 (338)
T d1udca_          81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-NVKNFIFSSSATVYGDQPKIPYVESFPT--GTPQSPYGKSKLMVE  157 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCSCCSSSBCTTSCC--CCCSSHHHHHHHHHH
T ss_pred             CCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHh-CCCEEEecCcceEEcccccccccccccc--CCCcchHHHHHhhhh
Confidence            997432  34567789999999999999999998 7999999999999987765544443322  223589999999999


Q ss_pred             HHHHHHh-h-cCCCEEEEecCceecCCCCCc---------hhHHHHHHHHHHcCC-CCcccc------CCCCceeeeeHH
Q 019878          151 KIALQAA-S-EGLPIVPVYPGVIYGPGKLTT---------GNLVAKLMIERFNGR-LPGYIG------YGNDRFSFCHVD  212 (334)
Q Consensus       151 ~~~~~~~-~-~g~~~~ilR~~~v~G~~~~~~---------~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~i~v~  212 (334)
                      +.+.++. . .+++++++|++++||++....         ..+++.++.....+. ++.++|      ++.+.|||+|++
T Consensus       158 ~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~  237 (338)
T d1udca_         158 QILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVM  237 (338)
T ss_dssp             HHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHH
T ss_pred             HHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEe
Confidence            9998755 3 489999999999999854211         235555555454433 333333      478899999999


Q ss_pred             HHHHHHHHHhhcC---CCCCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHH
Q 019878          213 DVVDGHIAAMEKG---RSGERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYP  288 (334)
Q Consensus       213 D~a~a~~~~~~~~---~~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (334)
                      |+++++..++...   ..+++||++ ++.+|+.|+++.+.+.+|.+.+....+.                   .+ .   
T Consensus       238 D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~~~~~~~~-------------------~~-~---  294 (338)
T d1udca_         238 DLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPR-------------------RE-G---  294 (338)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCCCEEEECC-------------------CT-T---
T ss_pred             ehhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCCceEECCC-------------------CC-C---
Confidence            9999988876643   346799997 5779999999999999998877644321                   00 0   


Q ss_pred             HHHHhhccceechHHHHHhcCCCCC-CHHHHHHHHHHHHHhc
Q 019878          289 TVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       289 ~~~~~~~~~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~  329 (334)
                          ......+|++|+++.|||+|+ +++++|+++++|++++
T Consensus       295 ----~~~~~~~d~~k~~~~lgwkp~~~l~egi~~ti~w~~~~  332 (338)
T d1udca_         295 ----DLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRH  332 (338)
T ss_dssp             ----CCSBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
T ss_pred             ----CCCEeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHhc
Confidence                012335799999999999999 9999999999999997

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=5.1e-47  Score=337.28  Aligned_cols=300  Identities=22%  Similarity=0.316  Sum_probs=238.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC--C--CCC--CCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD--I--SGL--PSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~--~--~~~--~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |||||||||||||++|+++|+++|++|.++.++...  .  ..+  ...++++++.+|++|.+.+..++.++|.|+|+|+
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~a~   82 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYAA   82 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhhhh
Confidence            789999999999999999999999887766654211  1  001  0114799999999999999999999999999998


Q ss_pred             ccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCc---------cCCCCCccccccccChHH
Q 019878           75 LVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGY---------IADENQVHEEKYFCTQYE  143 (334)
Q Consensus        75 ~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~---------~~~e~~~~~~~~~~~~Y~  143 (334)
                      ....  +..++..++++|+.|+.++++++...+  .++|++||..+||.....         +........+..|.+.|+
T Consensus        83 ~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~--~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~  160 (346)
T d1oc2a_          83 ESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD--IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYS  160 (346)
T ss_dssp             CCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT--CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHH
T ss_pred             cccccchhhCcccceeeehHhHHhhhhhhcccc--ccccccccceEecccCccccccccccCcccccccCCCCCCCCHHH
Confidence            7433  346778899999999999999999983  589999999999853210         001111112223468999


Q ss_pred             HHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHh
Q 019878          144 RSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAM  222 (334)
Q Consensus       144 ~sK~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~  222 (334)
                      .+|.++|.+++.+++ .|++++++||+++|||+... ...+..++.....+..+.+++++++.|+|+|++|+|+++..++
T Consensus       161 ~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~-~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~  239 (346)
T d1oc2a_         161 STKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHI-EKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAIL  239 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCT-TSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCc-cchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHHH
Confidence            999999999999875 69999999999999997643 4566777777888988989999999999999999999999999


Q ss_pred             hcCCCCCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceech
Q 019878          223 EKGRSGERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSC  301 (334)
Q Consensus       223 ~~~~~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  301 (334)
                      .++..++.||++ ++..++.++++.+.+.++.+.......                  ...+.        ....+..|+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~------------------~~~~~--------~~~~~~~d~  293 (346)
T d1oc2a_         240 TKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHV------------------TDRAG--------HDLRYAIDA  293 (346)
T ss_dssp             HHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEE------------------CCCTT--------CCCBCCBCC
T ss_pred             hhcccCccccccccccccchHHHHHHHHHhCCCCcceEEC------------------CCCCC--------CCceeeeCH
Confidence            998889999985 688999999999999998765433211                  01110        012345799


Q ss_pred             HHHHHhcCCCCC--CHHHHHHHHHHHHHhc
Q 019878          302 VKAKTELGYNPR--SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       302 ~k~~~~lG~~p~--~~~e~i~~~~~~~~~~  329 (334)
                      +|++++|||+|+  +++|+|+++++||++|
T Consensus       294 ~k~~~~LGw~P~~t~l~e~i~~ti~w~~~n  323 (346)
T d1oc2a_         294 SKLRDELGWTPQFTDFSEGLEETIQWYTDN  323 (346)
T ss_dssp             HHHHHHHCCCCSCCCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHCCCCcCCCHHHHHHHHHHHHHHH
Confidence            999999999997  6999999999999875

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=4.1e-47  Score=337.28  Aligned_cols=302  Identities=21%  Similarity=0.303  Sum_probs=245.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC----------CCCCCCCeEEEEcCCCChhhHHHHhcCCCEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS----------GLPSEGALELVYGDVTDYRSLVDACFGCHVIF   70 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----------~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   70 (334)
                      ++|||||||||||++|+++|+++|++|++++|......          ......+++++.+|+.|...+......+++|+
T Consensus        17 k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~~v~   96 (341)
T d1sb8a_          17 KVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDYVL   96 (341)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSEEE
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccccccccc
Confidence            36999999999999999999999999999997432110          00111368999999999999999999999999


Q ss_pred             EeccccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHH
Q 019878           71 HTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAV  148 (334)
Q Consensus        71 h~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~  148 (334)
                      |+++....  +..++...+++|+.|+.+++++|.+. ++++|||+||..+||.....+.+|+++..|   .+.|+.+|.+
T Consensus        97 ~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p---~~~Y~~sK~~  172 (341)
T d1sb8a_          97 HQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA-KVQSFTYAASSSTYGDHPGLPKVEDTIGKP---LSPYAVTKYV  172 (341)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHT-TCSEEEEEEEGGGGTTCCCSSBCTTCCCCC---CSHHHHHHHH
T ss_pred             cccccccccccccCccchhheeehhHHHHHHHHHhc-CCceEEEcccceeeCCCCCCCccCCCCCCC---CCcchHHHHH
Confidence            99986432  44567789999999999999999998 689999999999999888877888876654   5899999999


Q ss_pred             HHHHHHHHhh-cCCCEEEEecCceecCCCCCc---hhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhc
Q 019878          149 ADKIALQAAS-EGLPIVPVYPGVIYGPGKLTT---GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEK  224 (334)
Q Consensus       149 ~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~  224 (334)
                      +|+++..+.+ .+++++++||+++||++..+.   ..++..++..++.|++..++++|++.|+|+|++|++.++..++..
T Consensus       173 ~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~  252 (341)
T d1sb8a_         173 NELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATA  252 (341)
T ss_dssp             HHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhhhc
Confidence            9999998875 589999999999999976433   346778888888999999999999999999999999999999876


Q ss_pred             CC--CCCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceech
Q 019878          225 GR--SGERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSC  301 (334)
Q Consensus       225 ~~--~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  301 (334)
                      ..  .+++||++ ++..|+.|+++.+.+..+.+........               ........       .......|+
T Consensus       253 ~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~~~~~~~---------------~~~~~~~~-------~~~~~~~d~  310 (341)
T d1sb8a_         253 GLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREP---------------VYRDFREG-------DVRHSLADI  310 (341)
T ss_dssp             CGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCC---------------EEECCCTT-------CCSBCCBCC
T ss_pred             cccccceeeeecccccchHHHHHHHHHHHhccccccccccc---------------cccCCCCC-------CcCeeeeCH
Confidence            53  57899996 5889999999999998875432211000               00000000       012235699


Q ss_pred             HHHHHhcCCCCC-CHHHHHHHHHHHHHh
Q 019878          302 VKAKTELGYNPR-SLKEGLQEVLPWLRS  328 (334)
Q Consensus       302 ~k~~~~lG~~p~-~~~e~i~~~~~~~~~  328 (334)
                      +|+++.|||+|+ +++++|+++++||++
T Consensus       311 ~k~~~~LGw~p~~sl~~gi~~ti~wy~~  338 (341)
T d1sb8a_         311 SKAAKLLGYAPKYDVSAGVALAMPWYIM  338 (341)
T ss_dssp             HHHHHHTCCCCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence            999999999999 999999999999987

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=1.1e-45  Score=325.36  Aligned_cols=300  Identities=20%  Similarity=0.189  Sum_probs=238.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC-----CCCCCCCeEEEEcCCCChhhHHHHhcC--CCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-----GLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vih~a   73 (334)
                      .||||||||||||++|+++|+++||+|++++|......     .+...++++++.+|++|.+.+.+.+.+  +++++|+|
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a   80 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA   80 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence            47999999999999999999999999999999765422     122335799999999999999888765  78888888


Q ss_pred             cccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHH
Q 019878           74 ALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADK  151 (334)
Q Consensus        74 ~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~  151 (334)
                      +....  ...++..+++.|+.|+.+++++|++++..++|+++||..+|+.......+|+++..+   .++|+.+|.++|+
T Consensus        81 ~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p---~~~Y~~sK~~~E~  157 (321)
T d1rpna_          81 AQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYP---RSPYGVAKLYGHW  157 (321)
T ss_dssp             SCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCC---CSHHHHHHHHHHH
T ss_pred             ccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccc---cChhHHHHHHHHH
Confidence            76432  345677889999999999999999996667899999999999888777777766554   5899999999999


Q ss_pred             HHHHHhh-cCCCEEEEecCceecCCCCC--chhHHHHHHHHHHcCC-CCccccCCCCceeeeeHHHHHHHHHHHhhcCCC
Q 019878          152 IALQAAS-EGLPIVPVYPGVIYGPGKLT--TGNLVAKLMIERFNGR-LPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRS  227 (334)
Q Consensus       152 ~~~~~~~-~g~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~  227 (334)
                      ++..+.+ ++++++++||+++|||....  ..+.+...+.+...++ +...++++++.|+|+|++|+|+++..+++++..
T Consensus       158 ~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~~~  237 (321)
T d1rpna_         158 ITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDKA  237 (321)
T ss_dssp             HHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSSC
T ss_pred             HHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcCCc
Confidence            9999874 69999999999999996432  2234555666655554 445678999999999999999999999998754


Q ss_pred             CCeEEec-CCCCCHHHHHHHHHHHhCCCCCccc-ccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHH
Q 019878          228 GERYLLT-GENASFMQIFDMAAVITGTSRPRFC-IPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAK  305 (334)
Q Consensus       228 g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~  305 (334)
                       +.||++ ++..|+.++++.+.+..|.+.+... .+.                    ....+.    ....+..|++|++
T Consensus       238 -~~~ni~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~rp~----~~~~~~~d~~k~~  292 (321)
T d1rpna_         238 -DDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDP--------------------AFFRPA----EVDVLLGNPAKAQ  292 (321)
T ss_dssp             -CCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECG--------------------GGCCSS----CCCBCCBCTHHHH
T ss_pred             -CCceecccccceehhhhHHHHHHhCCCccceeecCC--------------------CCCCCC----ccCCccCCHHHHH
Confidence             568885 6889999999999999987654321 110                    000000    0123456999999


Q ss_pred             HhcCCCCC-CHHHHHHHHHHHHHh
Q 019878          306 TELGYNPR-SLKEGLQEVLPWLRS  328 (334)
Q Consensus       306 ~~lG~~p~-~~~e~i~~~~~~~~~  328 (334)
                      ++|||+|+ +++|+|+++++|+.+
T Consensus       293 k~lG~~P~~~l~e~i~~tv~~~l~  316 (321)
T d1rpna_         293 RVLGWKPRTSLDELIRMMVEADLR  316 (321)
T ss_dssp             HHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred             HHHCCCcCCCHHHHHHHHHHHHHH
Confidence            99999999 999999999999875

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-44  Score=321.31  Aligned_cols=312  Identities=19%  Similarity=0.161  Sum_probs=232.0

Q ss_pred             CcE-EEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC-----CC------CCCCCeEEEEcCCCChhhHHHHhcC--C
Q 019878            1 MKI-LVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-----GL------PSEGALELVYGDVTDYRSLVDACFG--C   66 (334)
Q Consensus         1 m~i-lItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~------~~~~~v~~~~~Dl~d~~~~~~~~~~--~   66 (334)
                      .|| ||||||||||++|+++|+++||+|++++|..+...     .+      ....+++++.+|++|.+.+..++.+  +
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   80 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP   80 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence            478 99999999999999999999999999999754211     10      1113689999999999999999864  7


Q ss_pred             CEEEEeccccCC--CCCCcccchhhhhHHHHHHHHHHHhcCC--CcEEEEecccceeccCCCccCCCCCccccccccChH
Q 019878           67 HVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKT--VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (334)
Q Consensus        67 d~vih~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y  142 (334)
                      ++|+|+|+....  ...++..++++|+.|+.+++++|++++.  .++|||+||.+|||.....+.+|+++..|   .++|
T Consensus        81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P---~~~Y  157 (347)
T d1t2aa_          81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYP---RSPY  157 (347)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCC---CSHH
T ss_pred             ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCC---CCHH
Confidence            899999986432  2345667789999999999999998732  34899999999999877777778776554   5899


Q ss_pred             HHHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCc---hhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHH
Q 019878          143 ERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTT---GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGH  218 (334)
Q Consensus       143 ~~sK~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  218 (334)
                      +.||.++|++++.+.+ ++++++++||+++|||+....   ......+......+..+..++++++.|+|+|++|+++++
T Consensus       158 g~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~  237 (347)
T d1t2aa_         158 GAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAM  237 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHH
Confidence            9999999999999864 699999999999999964322   122333444445666677789999999999999999999


Q ss_pred             HHHhhcCCCCCeEEe-cCCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCC----CCCHHHH-HH
Q 019878          219 IAAMEKGRSGERYLL-TGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLP----LISYPTV-HV  292 (334)
Q Consensus       219 ~~~~~~~~~g~~~~i-~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~  292 (334)
                      ..++++...+ .|++ .+...++.+....+...++........+.....           ......    ....... ..
T Consensus       238 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~rp~  305 (347)
T d1t2aa_         238 WLMLQNDEPE-DFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVG-----------RCKETGKVHVTVDLKYYRPT  305 (347)
T ss_dssp             HHHHHSSSCC-CEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEE-----------EETTTCCEEEEECGGGSCSS
T ss_pred             HHHhhcCCCc-cceeccccccccchhhhhhhhhhcceeeecccchhhhh-----------hhhhcCCceeeecccCCCCC
Confidence            9999986554 5666 478899999999999998876433221110000           000000    0000000 00


Q ss_pred             hhccceechHHHHHhcCCCCC-CHHHHHHHHHHHHH
Q 019878          293 LAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLR  327 (334)
Q Consensus       293 ~~~~~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~  327 (334)
                      ....+.+|++|++++|||+|+ +++|+|++++++..
T Consensus       306 ~~~~~~~d~skak~~Lgw~P~~sl~e~i~~~I~~~~  341 (347)
T d1t2aa_         306 EVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADV  341 (347)
T ss_dssp             CCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHH
T ss_pred             CcCEeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHH
Confidence            012335699999999999999 99999999987654

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-43  Score=313.15  Aligned_cols=299  Identities=21%  Similarity=0.253  Sum_probs=228.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC---CC---------CCCCeEEEEcCCCChhhHHHHhcC--CC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG---LP---------SEGALELVYGDVTDYRSLVDACFG--CH   67 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~---------~~~~v~~~~~Dl~d~~~~~~~~~~--~d   67 (334)
                      ||||||||||||++|+++|+++|++|++++|.......   ..         ...+++++.+|++|.+.+.+++.+  ++
T Consensus         4 KILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~~   83 (346)
T d1ek6a_           4 KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFM   83 (346)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCEE
T ss_pred             eEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccccccc
Confidence            59999999999999999999999999999863321111   10         114789999999999999998865  67


Q ss_pred             EEEEeccccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHH
Q 019878           68 VIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (334)
Q Consensus        68 ~vih~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (334)
                      +|+|+||....  +..++...++.|+.++.++++++.+. ++++||++||..+|+.......++...  ...+.++|+.+
T Consensus        84 ~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~-~v~~~i~~ss~~~~~~~~~~~~~~~~~--~~~~~~~Y~~~  160 (346)
T d1ek6a_          84 AVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH-GVKNLVFSSSATVYGNPQYLPLDEAHP--TGGCTNPYGKS  160 (346)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGGCSCSSSSBCTTSC--CCCCSSHHHHH
T ss_pred             cccccccccCcHhhHhCHHHHHHhhhcccccccchhhhc-Ccccccccccceeeecccccccccccc--ccccCChHHHH
Confidence            89999997442  34567788999999999999999998 799999999999999776443333222  12235889999


Q ss_pred             HHHHHHHHHHHhh--cCCCEEEEecCceecCCCCC---------chhHHHHHHHHHHcCCCC-cc------ccCCCCcee
Q 019878          146 KAVADKIALQAAS--EGLPIVPVYPGVIYGPGKLT---------TGNLVAKLMIERFNGRLP-GY------IGYGNDRFS  207 (334)
Q Consensus       146 K~~~E~~~~~~~~--~g~~~~ilR~~~v~G~~~~~---------~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~  207 (334)
                      |..+|+.+..+.+  .+++.+++||+++||+....         ...++..++..+.....+ .+      ..++.+.||
T Consensus       161 k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rd  240 (346)
T d1ek6a_         161 KFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRD  240 (346)
T ss_dssp             HHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEEC
T ss_pred             HHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEe
Confidence            9999999998764  48999999999999985321         123444444444433222 22      345778899


Q ss_pred             eeeHHHHHHHHHHHhhcC---CCCCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCC
Q 019878          208 FCHVDDVVDGHIAAMEKG---RSGERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLP  283 (334)
Q Consensus       208 ~i~v~D~a~a~~~~~~~~---~~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (334)
                      |+|++|+|.++..++...   ..+++||++ ++.+++.|+++.+.+..|.+.+....|.                   .+
T Consensus       241 fi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~~~~~~~-------------------~~  301 (346)
T d1ek6a_         241 YIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVAR-------------------RE  301 (346)
T ss_dssp             EEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECC-------------------CT
T ss_pred             EEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCCCeEECCC-------------------CC
Confidence            999999999998876543   356799996 5889999999999999998877644321                   10


Q ss_pred             CCCHHHHHHhhccceechHHHHHhcCCCCC-CHHHHHHHHHHHHHhcC
Q 019878          284 LISYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSSG  330 (334)
Q Consensus       284 ~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~~  330 (334)
                       .       .......|++|+++.|||+|+ +++|+|+++++|+++|.
T Consensus       302 -~-------e~~~~~~d~~k~~~~lgw~p~~slee~I~~~i~w~~~n~  341 (346)
T d1ek6a_         302 -G-------DVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNP  341 (346)
T ss_dssp             -T-------CCSEECBCCHHHHHTTCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred             -C-------CCCEeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHhCH
Confidence             0       012234699999999999999 99999999999999874

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.2e-43  Score=320.82  Aligned_cols=303  Identities=19%  Similarity=0.216  Sum_probs=227.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEc----------CCCCCCCCCC------------CCCeEEEEcCCCChhh
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVR----------RTSDISGLPS------------EGALELVYGDVTDYRS   58 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r----------~~~~~~~~~~------------~~~v~~~~~Dl~d~~~   58 (334)
                      |||||||||||||++|+++|+++||+|+++|.          ..........            ..+++++.+|++|.+.
T Consensus         2 ~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~   81 (393)
T d1i24a_           2 SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEF   81 (393)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHHH
Confidence            89999999999999999999999999999972          1111111110            1368999999999999


Q ss_pred             HHHHhcC--CCEEEEeccccCC--CC---CCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCC---
Q 019878           59 LVDACFG--CHVIFHTAALVEP--WL---PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIAD---  128 (334)
Q Consensus        59 ~~~~~~~--~d~vih~a~~~~~--~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~---  128 (334)
                      +.+++++  +|+|||+||....  +.   ..+..++..|+.|+.+++++|++.+..++++++||..+|+.......+   
T Consensus        82 l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~~~~  161 (393)
T d1i24a_          82 LAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYI  161 (393)
T ss_dssp             HHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSSEE
T ss_pred             HHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeeccccccccccccccccccc
Confidence            9999974  7999999986432  11   224467899999999999999998656678889988888755422111   


Q ss_pred             ---CC----CccccccccChHHHHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCc----------------hhHHH
Q 019878          129 ---EN----QVHEEKYFCTQYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTT----------------GNLVA  184 (334)
Q Consensus       129 ---e~----~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~----------------~~~~~  184 (334)
                         ++    ....+..|.++|+.+|.++|.++..+.+ ++++++++||+++|||+....                ...+.
T Consensus       162 ~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~  241 (393)
T d1i24a_         162 TITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALN  241 (393)
T ss_dssp             EEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHH
T ss_pred             cccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccccchh
Confidence               11    1112234568899999999999998875 699999999999999975321                23567


Q ss_pred             HHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCC-CCeEE--ecCCCCCHHHHHHHHHHHhC---CCCCcc
Q 019878          185 KLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRS-GERYL--LTGENASFMQIFDMAAVITG---TSRPRF  258 (334)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~-g~~~~--i~g~~~s~~e~~~~i~~~~g---~~~~~~  258 (334)
                      .++.+...++++.++|++.+.|||+|++|+++++..++++... |..+.  .+++.+|+.|+++.+.+..+   .+.+..
T Consensus       242 ~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~~~~~~~~~~  321 (393)
T d1i24a_         242 RFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLDVKKM  321 (393)
T ss_dssp             HHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTTTCCCCEE
T ss_pred             hhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHHhhCCCccee
Confidence            7778888899999999999999999999999999999998765 44333  34577999999999988754   333332


Q ss_pred             cccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhcCCCCC-CHHHHHHHHHHHHHhc
Q 019878          259 CIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~  329 (334)
                      ..+                    .+...     .....+..|++|+++ |||+|+ +++++++++++|+.+.
T Consensus       322 ~~~--------------------~~~~~-----~~~~~~~~d~~k~~~-LGw~P~~~~~~~i~~~~~~~~~~  367 (393)
T d1i24a_         322 TVP--------------------NPRVE-----AEEHYYNAKHTKLME-LGLEPHYLSDSLLDSLLNFAVQF  367 (393)
T ss_dssp             EEC--------------------CSSCS-----CSSCCCCBCCCHHHH-TTCCCCCCCHHHHHHHHHHHHHT
T ss_pred             ecc--------------------CCCCC-----CCccEecCCHHHHHH-cCCccccCHHHHHHHHHHHHHHH
Confidence            211                    01000     012334568899985 999999 9999999999998774

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.6e-43  Score=310.62  Aligned_cols=286  Identities=19%  Similarity=0.210  Sum_probs=224.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcC--CCEEEEeccccCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAALVEP   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vih~a~~~~~   78 (334)
                      +||||||||||||++|+++|+++|+.|+++++..+               .|+.|.+.+.+++..  +|.|+|+|+....
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~---------------~~~~~~~~~~~~~~~~~~d~v~~~a~~~~~   67 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE---------------LNLLDSRAVHDFFASERIDQVYLAAAKVGG   67 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT---------------CCTTCHHHHHHHHHHHCCSEEEECCCCCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh---------------ccccCHHHHHHHHhhcCCCEEEEcchhccc
Confidence            47999999999999999999999999887654432               488999999888754  8999999976543


Q ss_pred             ---CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCcc--ccccccChHHHHHHHHHHHH
Q 019878           79 ---WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVH--EEKYFCTQYERSKAVADKIA  153 (334)
Q Consensus        79 ---~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~--~~~~~~~~Y~~sK~~~E~~~  153 (334)
                         ...++..++++|+.++.+++++|.++ +++||||+||.+|||.....+.+|+.+.  ++.++.++|+.+|.++|+++
T Consensus        68 ~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~  146 (315)
T d1e6ua_          68 IVANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLC  146 (315)
T ss_dssp             HHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHH
T ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHHHHHH
Confidence               22345667899999999999999998 7999999999999998776666665433  22334568999999999999


Q ss_pred             HHHhh-cCCCEEEEecCceecCCCCCc---hh-----HHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhc
Q 019878          154 LQAAS-EGLPIVPVYPGVIYGPGKLTT---GN-----LVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEK  224 (334)
Q Consensus       154 ~~~~~-~g~~~~ilR~~~v~G~~~~~~---~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~  224 (334)
                      +.+.+ +|++++++||++||||++...   ..     ...........+....+++++.+.++|+|++|+++++..++.+
T Consensus       147 ~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~~~~~~  226 (315)
T d1e6ua_         147 ESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMEL  226 (315)
T ss_dssp             HHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHS
T ss_pred             HHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHHHhhhh
Confidence            99885 599999999999999975422   11     1222334455677777888999999999999999999999865


Q ss_pred             C---------CCCCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhh
Q 019878          225 G---------RSGERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLA  294 (334)
Q Consensus       225 ~---------~~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (334)
                      .         .....++++ +...++.++++.+.+.+|.+..+...+                   ..+.        ..
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~i~~~~-------------------~~~~--------~~  279 (315)
T d1e6ua_         227 AHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDA-------------------SKPD--------GT  279 (315)
T ss_dssp             CHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEET-------------------TSCC--------CC
T ss_pred             ccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCcceEECC-------------------CCCC--------CC
Confidence            3         234578885 788999999999999999876543211                   0010        01


Q ss_pred             ccceechHHHHHhcCCCCC-CHHHHHHHHHHHHHhcC
Q 019878          295 HQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSSG  330 (334)
Q Consensus       295 ~~~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~~  330 (334)
                      ....+|++|++ +|||+|+ +++++|+++++||++|+
T Consensus       280 ~~~~~d~sk~k-~Lg~~p~~~l~e~i~~ti~w~~~N~  315 (315)
T d1e6ua_         280 PRKLLDVTRLH-QLGWYHEISLEAGLASTYQWFLENQ  315 (315)
T ss_dssp             SBCCBCCHHHH-HTTCCCCCCHHHHHHHHHHHHHHTC
T ss_pred             ceeccCHHHHH-HcCCCCCCCHHHHHHHHHHHHHHcC
Confidence            12357999997 5999999 99999999999999874

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.9e-43  Score=313.00  Aligned_cols=297  Identities=16%  Similarity=0.201  Sum_probs=223.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC-CCCC-----CCCCeEEEEcCCCChhhHHHHhc--CCCEEEEec
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-SGLP-----SEGALELVYGDVTDYRSLVDACF--GCHVIFHTA   73 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vih~a   73 (334)
                      .|||||||||||++|++.|+++|++|+++++..... ....     ...+++++.+|++|.+.+..++.  ++|+|||+|
T Consensus         3 ~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~VihlA   82 (347)
T d1z45a2           3 IVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFA   82 (347)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEECC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEcc
Confidence            499999999999999999999999999998643321 1000     11378999999999999999886  699999999


Q ss_pred             cccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCC----ccCCCCCccccccccChHHHHHH
Q 019878           74 ALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDG----YIADENQVHEEKYFCTQYERSKA  147 (334)
Q Consensus        74 ~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~----~~~~e~~~~~~~~~~~~Y~~sK~  147 (334)
                      +....  ...++..+..+|+.++.+++++|++. ++++||++||.+|||....    .+.+|+.+..   |.++|+.+|.
T Consensus        83 a~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~-~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~---p~~~Y~~sK~  158 (347)
T d1z45a2          83 GLKAVGESTQIPLRYYHNNILGTVVLLELMQQY-NVSKFVFSSSATVYGDATRFPNMIPIPEECPLG---PTNPYGHTKY  158 (347)
T ss_dssp             SCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCC---CCSHHHHHHH
T ss_pred             ccccccccccCcccccccchhhhHHHHHHHHhc-ccceEEeecceeeecCcccCCCCCccccccCCC---CCChhHhHHH
Confidence            97532  34466788899999999999999998 7999999999999996653    2344444333   3589999999


Q ss_pred             HHHHHHHHHhh---cCCCEEEEecCceecCCCCC---------chhHHHHHHHHHHc-CCCCccccCC------CCceee
Q 019878          148 VADKIALQAAS---EGLPIVPVYPGVIYGPGKLT---------TGNLVAKLMIERFN-GRLPGYIGYG------NDRFSF  208 (334)
Q Consensus       148 ~~E~~~~~~~~---~g~~~~ilR~~~v~G~~~~~---------~~~~~~~~~~~~~~-~~~~~~~~~~------~~~~~~  208 (334)
                      ++|++++++.+   .+++++++||+++||+....         ...++..++..+.. +.++.++|++      ...+|+
T Consensus       159 ~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~  238 (347)
T d1z45a2         159 AIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDY  238 (347)
T ss_dssp             HHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECE
T ss_pred             HHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeee
Confidence            99999998753   47999999999999974321         12344444444433 3344455554      445678


Q ss_pred             eeHHHHHHHHHHHhhcC-------CCCCeEEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhC
Q 019878          209 CHVDDVVDGHIAAMEKG-------RSGERYLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITG  280 (334)
Q Consensus       209 i~v~D~a~a~~~~~~~~-------~~g~~~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (334)
                      +++.|.+.++..+++..       ..+++||++ ++.+|+.|+++.+.+.+|.+.+....+.                  
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~------------------  300 (347)
T d1z45a2         239 IHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGR------------------  300 (347)
T ss_dssp             EEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC-----------------------
T ss_pred             eeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCCceEeCCC------------------
Confidence            88888999988887642       236789996 6889999999999999998876532211                  


Q ss_pred             CCCCCCHHHHHHhhccceechHHHHHhcCCCCC-CHHHHHHHHHHHHHhc
Q 019878          281 KLPLISYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRSS  329 (334)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~~  329 (334)
                       .+        .......+|++|++++|||+|+ +++++|+++++|+++|
T Consensus       301 -~~--------~~~~~~~~d~sk~~~~lGw~p~~~lee~i~~ti~w~~~n  341 (347)
T d1z45a2         301 -RA--------GDVLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTEN  341 (347)
T ss_dssp             -------------CCCCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHC
T ss_pred             -CC--------CCCCEeeECHHHHHHHHCCCCCCCHHHHHHHHHHHHHhC
Confidence             00        0012335799999999999999 9999999999999987

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=100.00  E-value=5.3e-43  Score=315.41  Aligned_cols=298  Identities=22%  Similarity=0.258  Sum_probs=224.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHh-CCCeEEEEEcCC---CCCCCC-------------------CCCCCeEEEEcCCCChh
Q 019878            1 MKILVSGASGYLGGRLCHALLK-QGHSVRALVRRT---SDISGL-------------------PSEGALELVYGDVTDYR   57 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~-~g~~V~~~~r~~---~~~~~~-------------------~~~~~v~~~~~Dl~d~~   57 (334)
                      |||||||||||||++|+++|++ .|++|+++++-.   .....+                   .....+.++.+|++|.+
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~   82 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHH
Confidence            9999999999999999999986 689999998511   110000                   01136889999999999


Q ss_pred             hHHHHhc---CCCEEEEeccccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCcc------
Q 019878           58 SLVDACF---GCHVIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYI------  126 (334)
Q Consensus        58 ~~~~~~~---~~d~vih~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~------  126 (334)
                      .+.++++   ++|+|||+|+....  ...++...++.|+.++.++++++++. ++++++++||..+|+......      
T Consensus        83 ~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~  161 (383)
T d1gy8a_          83 FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLH-KCDKIIFSSSAAIFGNPTMGSVSTNAE  161 (383)
T ss_dssp             HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred             Hhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhcc-CCccccccccccccccccccccccccc
Confidence            9998885   47999999997432  23355678899999999999999998 789999999999998665322      


Q ss_pred             -CCCCCccccccccChHHHHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCc--------hhHHHHHHHHHH-----
Q 019878          127 -ADENQVHEEKYFCTQYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTT--------GNLVAKLMIERF-----  191 (334)
Q Consensus       127 -~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~--------~~~~~~~~~~~~-----  191 (334)
                       ..|++.   ..|.++|+.+|.++|+++..+.+ +|++++++||+++|||+....        .++++.++.+.+     
T Consensus       162 ~~~e~~~---~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~  238 (383)
T d1gy8a_         162 PIDINAK---KSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAP  238 (383)
T ss_dssp             CBCTTSC---CBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSC
T ss_pred             ccccccC---CCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhccc
Confidence             222222   23469999999999999999875 699999999999999976422        123333333322     


Q ss_pred             -----------cCCCCccc------cCCCCceeeeeHHHHHHHHHHHhhcC---------CCCCeEEec-CCCCCHHHHH
Q 019878          192 -----------NGRLPGYI------GYGNDRFSFCHVDDVVDGHIAAMEKG---------RSGERYLLT-GENASFMQIF  244 (334)
Q Consensus       192 -----------~~~~~~~~------~~~~~~~~~i~v~D~a~a~~~~~~~~---------~~g~~~~i~-g~~~s~~e~~  244 (334)
                                 .+....++      ++|.+.|+|+|++|+|+++..+++..         ..+++||++ |+++|+.|++
T Consensus       239 ~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el~  318 (383)
T d1gy8a_         239 DQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVI  318 (383)
T ss_dssp             C-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHH
T ss_pred             cccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHHHH
Confidence                       12222222      45788999999999999999998642         245799995 7889999999


Q ss_pred             HHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhcCCCCC-CHHHHHHHH-
Q 019878          245 DMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEV-  322 (334)
Q Consensus       245 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~-~~~e~i~~~-  322 (334)
                      +.+.+..|.+.+....+                   ..+ .       ....+..|++|++++|||+|+ +++|+|+++ 
T Consensus       319 ~~i~~~~~~~~~~~~~~-------------------~~~-~-------d~~~~~~d~~k~~k~LGw~P~~~l~e~i~~t~  371 (383)
T d1gy8a_         319 EVARKTTGHPIPVRECG-------------------RRE-G-------DPAYLVAASDKAREVLGWKPKYDTLEAIMETS  371 (383)
T ss_dssp             HHHHHHHCCCCCEEEEC-------------------CCT-T-------CCSEECBCCHHHHHHTCCCCSCCSHHHHHHHH
T ss_pred             HHHHHHhCCCCceEECC-------------------CCC-C-------CcCEeeeCHHHHHHHHCCccCCCHHHHHHHHH
Confidence            99999999887764332                   100 0       012335699999999999999 999999987 


Q ss_pred             HHHHHhc
Q 019878          323 LPWLRSS  329 (334)
Q Consensus       323 ~~~~~~~  329 (334)
                      +.|++.+
T Consensus       372 ~~w~~~~  378 (383)
T d1gy8a_         372 WKFQRTH  378 (383)
T ss_dssp             HHHHHTC
T ss_pred             HHHHHhC
Confidence            5788776

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=5.7e-43  Score=310.11  Aligned_cols=301  Identities=18%  Similarity=0.149  Sum_probs=229.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC-----CCCCC------CCCCeEEEEcCCCChhhHHHHhc--CCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-----ISGLP------SEGALELVYGDVTDYRSLVDACF--GCH   67 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~~~------~~~~v~~~~~Dl~d~~~~~~~~~--~~d   67 (334)
                      .++||||||||||++|+++|+++||+|++++|..+.     ...+.      ....++++.+|+++.+.+...++  ++|
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~D   81 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD   81 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhccc
Confidence            369999999999999999999999999999996542     11111      11368899999999999998875  489


Q ss_pred             EEEEeccccCC--CCCCcccchhhhhHHHHHHHHHHHhc----CCCcEEEEecccceeccCCCccCCCCCccccccccCh
Q 019878           68 VIFHTAALVEP--WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (334)
Q Consensus        68 ~vih~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  141 (334)
                      +|||+|+....  ...++...+..|+.++.+++++++..    ....++++.||..+|+.... ..+|+.+..|   .+.
T Consensus        82 ~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~-~~~E~~~~~p---~~~  157 (339)
T d1n7ha_          82 EVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPFHP---RSP  157 (339)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-SBCTTSCCCC---CSH
T ss_pred             hhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCC-CCCCCCCCCC---cch
Confidence            99999997443  23467788999999999999999764    13457888998888877654 3455554433   599


Q ss_pred             HHHHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCc--hhHHHHHHHHHH-cCCCCccccCCCCceeeeeHHHHHHH
Q 019878          142 YERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTT--GNLVAKLMIERF-NGRLPGYIGYGNDRFSFCHVDDVVDG  217 (334)
Q Consensus       142 Y~~sK~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~a  217 (334)
                      |+.+|.++|+++..+.+ ++++++++||++||||.....  .+.+...+.... .+......|++.+.|+|+|++|++++
T Consensus       158 Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~  237 (339)
T d1n7ha_         158 YAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEA  237 (339)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHH
Confidence            99999999999999875 699999999999999964321  223333333433 44455567889999999999999999


Q ss_pred             HHHHhhcCCCCCeEEecCCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccc
Q 019878          218 HIAAMEKGRSGERYLLTGENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQW  297 (334)
Q Consensus       218 ~~~~~~~~~~g~~~~i~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (334)
                      +..+++++..+..++.++...+..++++.+.+.++...+.......               ....| .       ....+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~r~-~-------~~~~~  294 (339)
T d1n7ha_         238 MWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQ---------------RYFRP-A-------EVDNL  294 (339)
T ss_dssp             HHHHHTSSSCCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECG---------------GGSCS-S-------CCCBC
T ss_pred             HHHHHhcCCCCccccccccccccchhhhhhhhhhhcccCceeeecc---------------CCCCC-C-------CCCee
Confidence            9999998877666666788899999999999999876443211000               00000 0       01233


Q ss_pred             eechHHHHHhcCCCCC-CHHHHHHHHHHHHHh
Q 019878          298 AYSCVKAKTELGYNPR-SLKEGLQEVLPWLRS  328 (334)
Q Consensus       298 ~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~  328 (334)
                      ..|++|++++|||+|+ +++++|++|++|+.+
T Consensus       295 ~~d~~Kak~~LGw~P~~~le~gi~~ti~~~~~  326 (339)
T d1n7ha_         295 QGDASKAKEVLGWKPQVGFEKLVKMMVDEDLE  326 (339)
T ss_dssp             CBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred             eECHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence            4699999999999999 999999999999965

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=100.00  E-value=1.9e-41  Score=299.80  Aligned_cols=299  Identities=22%  Similarity=0.306  Sum_probs=224.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC-----CCCCCCCCeEEEEcCCCChhhHHHHhcC--CCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-----SGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vih~a~   74 (334)
                      ||||||||||||++|+++|+++|++|+++++-....     ..+...++++++.+|++|.+.+.+++++  +|+|||+|+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa   81 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG   81 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecc
Confidence            799999999999999999999999999997532211     1112234799999999999999999875  699999999


Q ss_pred             ccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccce-eccCCCccCCCCCc-------------cccccc
Q 019878           75 LVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA-LGSTDGYIADENQV-------------HEEKYF  138 (334)
Q Consensus        75 ~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v-~~~~~~~~~~e~~~-------------~~~~~~  138 (334)
                      ....  ...++...+++|+.||.+|+++|.+. +++++|+.||..+ ++.....+..+...             ..+..+
T Consensus        82 ~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (338)
T d1orra_          82 QVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-NSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDF  160 (338)
T ss_dssp             CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCC
T ss_pred             cccccccccChHHHHHHHHHHHHHHHHhhhcc-cccccccccccccccccccccccccccccccccccccCcccCCcccc
Confidence            7543  33467788999999999999999998 5666555555544 44333222111110             111224


Q ss_pred             cChHHHHHHHHHHHHHHHhh-cCCCEEEEecCceecCCCCCc--hhHHHHHHHHHH-----cCCCCccccCCCCceeeee
Q 019878          139 CTQYERSKAVADKIALQAAS-EGLPIVPVYPGVIYGPGKLTT--GNLVAKLMIERF-----NGRLPGYIGYGNDRFSFCH  210 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~~-~g~~~~ilR~~~v~G~~~~~~--~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~  210 (334)
                      .+.|+.+|...|.+...+.+ ++...+++|++.+||+.....  ...+..++...+     .+.+..++|+|++.|+|+|
T Consensus       161 ~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~  240 (338)
T d1orra_         161 HSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLH  240 (338)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEE
T ss_pred             ccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEeeec
Confidence            58899999999999988764 699999999999998654221  223334433333     3666778899999999999


Q ss_pred             HHHHHHHHHHHhhcC--CCCCeEEec-C--CCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCC
Q 019878          211 VDDVVDGHIAAMEKG--RSGERYLLT-G--ENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLI  285 (334)
Q Consensus       211 v~D~a~a~~~~~~~~--~~g~~~~i~-g--~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (334)
                      ++|+++++..++++.  ..|++|++. +  +.+++.|+++.+.+..+.+.++...+.                   .+ .
T Consensus       241 v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~-------------------~~-~  300 (338)
T d1orra_         241 AEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPV-------------------RE-S  300 (338)
T ss_dssp             HHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECC-------------------CS-S
T ss_pred             ccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCceeEeCCC-------------------CC-C
Confidence            999999999999764  368899994 3  558999999999999998877644321                   00 0


Q ss_pred             CHHHHHHhhccceechHHHHHhcCCCCC-CHHHHHHHHHHHHHh
Q 019878          286 SYPTVHVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRS  328 (334)
Q Consensus       286 ~~~~~~~~~~~~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~  328 (334)
                             ....+..|++|++++|||+|+ +++|+|+++++|+++
T Consensus       301 -------~~~~~~~d~~k~~~~Lg~~p~~sl~e~i~~ti~W~k~  337 (338)
T d1orra_         301 -------DQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSS  337 (338)
T ss_dssp             -------CCSEECBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred             -------CcCeeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHc
Confidence                   012234699999999999999 999999999999975

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=100.00  E-value=3.1e-40  Score=294.37  Aligned_cols=298  Identities=20%  Similarity=0.305  Sum_probs=229.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CCCCCeEEEEcCCCChhhHHHHhcC--CCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vih~a~   74 (334)
                      +||||||||||||++|+++|+++|++|++++|+..+...+    ...++++++.+|++|++.+.++++.  +|+|+|+|+
T Consensus         9 KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~aa   88 (356)
T d1rkxa_           9 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMAA   88 (356)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhhhc
Confidence            5899999999999999999999999999999987754431    1224799999999999999998864  899999999


Q ss_pred             ccCC--CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCC-CccCCCCCccccccccChHHHHHHHHHH
Q 019878           75 LVEP--WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTD-GYIADENQVHEEKYFCTQYERSKAVADK  151 (334)
Q Consensus        75 ~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~-~~~~~e~~~~~~~~~~~~Y~~sK~~~E~  151 (334)
                      ....  +..++..++.+|+.++.++++++.+.+..+.+++.||..++.... ..+.+++.+..|   .++|+.+|..+|.
T Consensus        89 ~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p---~~~y~~~k~~~e~  165 (356)
T d1rkxa_          89 QPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGG---YDPYSNSKGCAEL  165 (356)
T ss_dssp             CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCC---SSHHHHHHHHHHH
T ss_pred             cccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCC---CCccccccccchh
Confidence            7433  345677889999999999999999986666777777766665444 344455544433   5899999999998


Q ss_pred             HHHHHh----------hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHH
Q 019878          152 IALQAA----------SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAA  221 (334)
Q Consensus       152 ~~~~~~----------~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~  221 (334)
                      .+..+.          ..++.++++||+++|||++.....++..++.. ..++.+..++.+.+.++|+|++|+++++..+
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~v~D~~~a~~~~  244 (356)
T d1rkxa_         166 VTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRA-FEQSQPVIIRNPHAIRPWQHVLEPLSGYLLL  244 (356)
T ss_dssp             HHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHH-HHTTCCEECSCTTCEECCEETHHHHHHHHHH
T ss_pred             hhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHH-HhCCCceEEeeccccccccccccccchhhhh
Confidence            877643          24788999999999999876555565555544 4566666788999999999999999999988


Q ss_pred             hhcCC-----CCCeEEec---CCCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHh
Q 019878          222 MEKGR-----SGERYLLT---GENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVL  293 (334)
Q Consensus       222 ~~~~~-----~g~~~~i~---g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (334)
                      +.+..     .+...+..   ++..++.++++.+.+..+...+....+.                      ..    ...
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~----------------------~~----~~~  298 (356)
T d1rkxa_         245 AQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGN----------------------AH----PHE  298 (356)
T ss_dssp             HHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC---------------------------------C
T ss_pred             hhhhcccccccccccccccccccccccchhhhhhHHHhCCCccEEEcCC----------------------CC----CCC
Confidence            87642     13333432   3568999999999999998766532110                      00    001


Q ss_pred             hccceechHHHHHhcCCCCC-CHHHHHHHHHHHHHh
Q 019878          294 AHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWLRS  328 (334)
Q Consensus       294 ~~~~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~~~  328 (334)
                      ......|++|++++|||+|+ +++++|+++++||++
T Consensus       299 ~~~~~~d~skak~~LGw~P~~~l~egi~~ti~wyk~  334 (356)
T d1rkxa_         299 AHYLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKN  334 (356)
T ss_dssp             CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_pred             cCeeeEcHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence            23335799999999999999 999999999999976

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=100.00  E-value=1e-39  Score=281.48  Aligned_cols=274  Identities=17%  Similarity=0.129  Sum_probs=222.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc--CCCEEEEeccccCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAALVEP   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vih~a~~~~~   78 (334)
                      |||||||||||||++|+++|.++||+|++++|+.                +|+.|.+.+.++++  ++|+|||+|+....
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~----------------~D~~d~~~~~~~l~~~~~d~vih~a~~~~~   65 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD----------------LDITNVLAVNKFFNEKKPNVVINCAAHTAV   65 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT----------------CCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh----------------ccCCCHHHHHHHHHHcCCCEEEeecccccc
Confidence            9999999999999999999999999999998863                48899999999987  58999999987442


Q ss_pred             --CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHH
Q 019878           79 --WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (334)
Q Consensus        79 --~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~  156 (334)
                        +...+......|+..+..+.+.+...  ...++++||..+|+.....+..|.+...+   .+.|+.+|..+|+++.+ 
T Consensus        66 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~--~~~~~~~ss~~v~~~~~~~~~~e~~~~~~---~~~~~~~k~~~e~~~~~-  139 (281)
T d1vl0a_          66 DKCEEQYDLAYKINAIGPKNLAAAAYSV--GAEIVQISTDYVFDGEAKEPITEFDEVNP---QSAYGKTKLEGENFVKA-  139 (281)
T ss_dssp             HHHHHCHHHHHHHHTHHHHHHHHHHHHH--TCEEEEEEEGGGSCSCCSSCBCTTSCCCC---CSHHHHHHHHHHHHHHH-
T ss_pred             ccccccchhhcccccccccccccccccc--cccccccccceeeeccccccccccccccc---hhhhhhhhhHHHHHHHH-
Confidence              33455677889999999999999886  45899999999999887777777666554   48899999999998877 


Q ss_pred             hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCCCCeEEec-C
Q 019878          157 ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLT-G  235 (334)
Q Consensus       157 ~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g~~~~i~-g  235 (334)
                        .+.+++++||+++||++.    ++...++.....+....+.+  ++.++++|++|+++++..++++...| +||++ +
T Consensus       140 --~~~~~~i~R~~~vyG~~~----~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~~~~~~~~~~~~~~g-~~~~~~~  210 (281)
T d1vl0a_         140 --LNPKYYIVRTAWLYGDGN----NFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEKNYG-TFHCTCK  210 (281)
T ss_dssp             --HCSSEEEEEECSEESSSS----CHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHTCCE-EEECCCB
T ss_pred             --hCCCccccceeEEeCCCc----ccccchhhhhccCCceeecC--CceeccchhhhhhhhhhhhhhhcccC-ceeEeCC
Confidence              678899999999999964    34556666666666665554  58999999999999999999987665 88885 6


Q ss_pred             CCCCHHHHHHHHHHHhCCCCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhcCCCCCCH
Q 019878          236 ENASFMQIFDMAAVITGTSRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTELGYNPRSL  315 (334)
Q Consensus       236 ~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~  315 (334)
                      +.+|+.|+++.+.+.+|.+.++.+++.                 ...+....     .+....+|++|+++.|||+|.++
T Consensus       211 ~~~s~~e~~~~i~~~~g~~~~i~~i~~-----------------~~~~~~a~-----rp~~~~ld~~k~~~~~g~~~~~~  268 (281)
T d1vl0a_         211 GICSWYDFAVEIFRLTGIDVKVTPCTT-----------------EEFPRPAK-----RPKYSVLRNYMLELTTGDITREW  268 (281)
T ss_dssp             SCEEHHHHHHHHHHHHCCCCEEEEECS-----------------TTSCCSSC-----CCSBCCBCCHHHHHTTCCCCCBH
T ss_pred             CccchHHHHHHHHHHhCCCceEEeccH-----------------HHcCCcCC-----CccccccCHHHHHHHhCCCCCCH
Confidence            889999999999999999877655431                 11110000     01223479999999999999999


Q ss_pred             HHHHHHHHHHHH
Q 019878          316 KEGLQEVLPWLR  327 (334)
Q Consensus       316 ~e~i~~~~~~~~  327 (334)
                      +++|++++++++
T Consensus       269 ~~~l~~~l~~l~  280 (281)
T d1vl0a_         269 KESLKEYIDLLQ  280 (281)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhc
Confidence            999999999985

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=100.00  E-value=2.6e-38  Score=280.28  Aligned_cols=296  Identities=19%  Similarity=0.185  Sum_probs=212.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC-------CCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-------PSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      +|||||||||||++|+++|+++|++|+++.|+..+...+       .......++.+|+.|.+.+.+++.++|+|+|+|+
T Consensus        13 ~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~~~a~   92 (342)
T d1y1pa1          13 LVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAHIAS   92 (342)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhhhhcc
Confidence            699999999999999999999999999999975432211       0112355688999999999999999999999999


Q ss_pred             ccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceecc-CC---CccCCCCCc-------------ccccc
Q 019878           75 LVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS-TD---GYIADENQV-------------HEEKY  137 (334)
Q Consensus        75 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~-~~---~~~~~e~~~-------------~~~~~  137 (334)
                      ..... .++..++..|+.|+.+++++|.+..++++||++||..+++. .+   ....+|+..             ..+..
T Consensus        93 ~~~~~-~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~  171 (342)
T d1y1pa1          93 VVSFS-NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQK  171 (342)
T ss_dssp             CCSCC-SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTH
T ss_pred             ccccc-ccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccccccCCCC
Confidence            75432 44566788999999999999999877999999999865432 21   222233221             12223


Q ss_pred             ccChHHHHHHHHHHHHHHHhh-c--CCCEEEEecCceecCCCCC--chhHHHHHHHHHHcCCCCccccCCCCceeeeeHH
Q 019878          138 FCTQYERSKAVADKIALQAAS-E--GLPIVPVYPGVIYGPGKLT--TGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVD  212 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~~~~-~--g~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  212 (334)
                      +.++|+.+|..+|++++.+.+ +  ++.++++||+.+|||...+  ....+..++.....+..... ..+.+.++|+|++
T Consensus       172 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~-~~~~~~~~~v~v~  250 (342)
T d1y1pa1         172 SLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPA-LALMPPQYYVSAV  250 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHH-HHTCCSEEEEEHH
T ss_pred             CcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcc-cCCccceeeeeHH
Confidence            457899999999999998864 3  5778899999999985322  23345666666677665544 4456778999999


Q ss_pred             HHHHHHHHHhhcCCCCCeEEe-cCCCCCHHHHHHHHHHHhCC-CCCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHH
Q 019878          213 DVVDGHIAAMEKGRSGERYLL-TGENASFMQIFDMAAVITGT-SRPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTV  290 (334)
Q Consensus       213 D~a~a~~~~~~~~~~g~~~~i-~g~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (334)
                      |+|++++.+++++..++.|++ +++.+|+.|+++++.+.... ..+. .++                  ...+...    
T Consensus       251 Dva~~~i~~l~~~~~~g~~~~~~~~~~t~~eia~~i~k~~p~~~~~~-~~~------------------~~~~~~~----  307 (342)
T d1y1pa1         251 DIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPA-DFP------------------DQGQDLS----  307 (342)
T ss_dssp             HHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSCCCC-CCC------------------CCCCCCC----
T ss_pred             HHHHHHHHhhcCccccceEEEEcCCceEHHHHHHHHHHHcCCCcCCc-cCC------------------ccCcccc----
Confidence            999999999998776554555 67889999999999987632 2211 111                  0000000    


Q ss_pred             HHhhccceechHHHHHhcCCCCC-CHHHHHHHHHHHH
Q 019878          291 HVLAHQWAYSCVKAKTELGYNPR-SLKEGLQEVLPWL  326 (334)
Q Consensus       291 ~~~~~~~~~d~~k~~~~lG~~p~-~~~e~i~~~~~~~  326 (334)
                         ..+...+ .+..+.|||++. +++++|++++++.
T Consensus       308 ---~~~~~~s-~~~~k~lg~~~~~~lee~i~d~I~s~  340 (342)
T d1y1pa1         308 ---KFDTAPS-LEILKSLGRPGWRSIEESIKDLVGSE  340 (342)
T ss_dssp             ---EECCHHH-HHHHHHTTCCSCCCHHHHHHHHHCCS
T ss_pred             ---cccchHH-HHHHHHcCCCCCcCHHHHHHHHHHhC
Confidence               0011112 334446999998 9999999998754

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.1e-36  Score=261.01  Aligned_cols=290  Identities=20%  Similarity=0.219  Sum_probs=191.6

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHH-H-----hcCCCEEEEeccc
Q 019878            3 ILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD-A-----CFGCHVIFHTAAL   75 (334)
Q Consensus         3 ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~-~-----~~~~d~vih~a~~   75 (334)
                      |||||||||||++|++.|+++|+ +|+++++-...... ..  ..+....|..+.+.+.. .     +..+++|+|+|+.
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa~   78 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-VN--LVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGAC   78 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGG-HH--HHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchh-hc--ccccchhhhccchHHHHHHhhhhcccchhhhhhhccc
Confidence            89999999999999999999995 78888643221110 00  01111122223332222 2     2358999999987


Q ss_pred             cCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHH
Q 019878           76 VEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ  155 (334)
Q Consensus        76 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~  155 (334)
                      ......+.......|+.++.+++++++.. ++ ++|+.||..+|+.......+++....   +.+.|+.+|.++|.++..
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~i-~~v~~ss~~~~~~~~~~~~~~~~~~~---~~~~Y~~~K~~~e~~~~~  153 (307)
T d1eq2a_          79 SSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAATYGGRTSDFIESREYEK---PLNVYGYSKFLFDEYVRQ  153 (307)
T ss_dssp             CCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEGGGGTTCCSCBCSSGGGCC---CSSHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccc-cc-cccccccccccccccccccccccccc---cccccccccchhhhhccc
Confidence            66655667778899999999999999998 55 56777777777665544444444433   358999999999999999


Q ss_pred             Hhh-cCCCEEEEecCceecCCCCCc---hhHHHHHHHHHHcCCCCcc-ccCCCCceeeeeHHHHHHHHHHHhhcCCCCCe
Q 019878          156 AAS-EGLPIVPVYPGVIYGPGKLTT---GNLVAKLMIERFNGRLPGY-IGYGNDRFSFCHVDDVVDGHIAAMEKGRSGER  230 (334)
Q Consensus       156 ~~~-~g~~~~ilR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g~~  230 (334)
                      +.+ ++++++++||+++|||+....   ...+..+......++.+.+ .+++...|+|+|++|+++++..++++.. .+.
T Consensus       154 ~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~-~~~  232 (307)
T d1eq2a_         154 ILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-SGI  232 (307)
T ss_dssp             HGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC-CEE
T ss_pred             cccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhcc-ccc
Confidence            875 699999999999999975422   1234445555555555444 4778889999999999999999998764 458


Q ss_pred             EEec-CCCCCHHHHHHHHHHHhCCC-CCcccccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHHHhc
Q 019878          231 YLLT-GENASFMQIFDMAAVITGTS-RPRFCIPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAKTEL  308 (334)
Q Consensus       231 ~~i~-g~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l  308 (334)
                      ||++ |+..|+.|+++++.+..+.. .+..+.|.                         ............|++|+++.+
T Consensus       233 ~~~~~~~~~si~~i~~~i~~~~~~~~i~~~~~~~-------------------------~~~~~~~~~~~~d~~k~~~~~  287 (307)
T d1eq2a_         233 FNLGTGRAESFQAVADATLAYHKKGQIEYIPFPD-------------------------KLKGRYQAFTQADLTNLRAAG  287 (307)
T ss_dssp             EEESCSCCBCHHHHHHHC----------------------------------------------CCCSCCBCCHHHHHTT
T ss_pred             cccccccchhHHHHHHHHHHhcCCCCeeEeeCCc-------------------------cCCCCCceeeecCHHHHHHHH
Confidence            8885 78899999999998765431 11111110                         000001112234899999999


Q ss_pred             CCCCC-CHHHHHHHHHHHH
Q 019878          309 GYNPR-SLKEGLQEVLPWL  326 (334)
Q Consensus       309 G~~p~-~~~e~i~~~~~~~  326 (334)
                      ||+|+ +++|+|+++++|+
T Consensus       288 ~~~p~~sl~egi~~~i~w~  306 (307)
T d1eq2a_         288 YDKPFKTVAEGVTEYMAWL  306 (307)
T ss_dssp             CCCCCCCHHHHHHHHHHHT
T ss_pred             CCCCCCCHHHHHHHHHHhC
Confidence            99999 9999999999996

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=100.00  E-value=5.7e-36  Score=259.70  Aligned_cols=282  Identities=14%  Similarity=0.131  Sum_probs=206.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcC--CCEEEEeccccC-
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG--CHVIFHTAALVE-   77 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~--~d~vih~a~~~~-   77 (334)
                      |||||||||||||++|++.|.++|+ ++++++....            +.+|++|.+.+.+++++  +|+||||||... 
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~------------~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~~~   67 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE------------FCGDFSNPKGVAETVRKLRPDVIVNAAAHTAV   67 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS------------SCCCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc------------ccCcCCCHHHHHHHHHHcCCCEEEEecccccc
Confidence            9999999999999999999999886 5555555432            23699999999998874  799999999754 


Q ss_pred             -CCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHH
Q 019878           78 -PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA  156 (334)
Q Consensus        78 -~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~  156 (334)
                       .+..++...+..|+.++.+++++|++. + .+++++||..+|+.....+.+|+.+..|   .+.|+.+|..+|+.+...
T Consensus        68 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~~~~ss~~~~~~~~~~~~~E~~~~~p---~~~y~~~k~~~e~~~~~~  142 (298)
T d1n2sa_          68 DKAESEPELAQLLNATSVEAIAKAANET-G-AWVVHYSTDYVFPGTGDIPWQETDATSP---LNVYGKTKLAGEKALQDN  142 (298)
T ss_dssp             HHHTTCHHHHHHHHTHHHHHHHHHHTTT-T-CEEEEEEEGGGSCCCTTCCBCTTSCCCC---SSHHHHHHHHHHHHHHHH
T ss_pred             cccccCccccccccccccccchhhhhcc-c-cccccccccccccCCCCCCCccccccCC---CchHhhhhhhhhhhHHhh
Confidence             245677788999999999999999987 3 5899999999998887777777776554   589999999999998874


Q ss_pred             hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhc----CCCCCeEE
Q 019878          157 ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEK----GRSGERYL  232 (334)
Q Consensus       157 ~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~----~~~g~~~~  232 (334)
                      .   ....++|++..|+....   +....+......+....  ..+.+.++++|++|+++++..++..    +..+++||
T Consensus       143 ~---~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~~~n  214 (298)
T d1n2sa_         143 C---PKHLIFRTSWVYAGKGN---NFAKTMLRLAKERQTLS--VINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYH  214 (298)
T ss_dssp             C---SSEEEEEECSEECSSSC---CHHHHHHHHHHHCSEEE--EECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEE
T ss_pred             h---cccccccccceeeccCC---ccchhhhhhhcccceee--cccceeecccccchHHHHHHHHHhhhhcccccccccc
Confidence            3   34667777766644321   22223333333343333  3356788999999999999888753    34678999


Q ss_pred             ecC-CCCCHHHHHHHHHHHhCCC---CCccc---ccHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHhhccceechHHHH
Q 019878          233 LTG-ENASFMQIFDMAAVITGTS---RPRFC---IPLWLIEAYGWILVFFSRITGKLPLISYPTVHVLAHQWAYSCVKAK  305 (334)
Q Consensus       233 i~g-~~~s~~e~~~~i~~~~g~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~  305 (334)
                      +++ +.++..++++.+.+..+..   .+...   ++.                 ...+...     ..+....+|++|++
T Consensus       215 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~-----------------~~~~~~a-----~RP~~~~ld~~K~~  272 (298)
T d1n2sa_         215 LVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPT-----------------SAYPTPA-----SRPGNSRLNTEKFQ  272 (298)
T ss_dssp             CCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECS-----------------TTSCCSS-----CCCSBCCBCCHHHH
T ss_pred             ccCCCceecHHHHHHHHhhhhccCccccccceeeeeh-----------------hhcCccC-----CCccccccCHHHHH
Confidence            975 7799999999988765432   22111   000                 0000000     00123357999999


Q ss_pred             HhcCCCCCCHHHHHHHHHHHHHhcC
Q 019878          306 TELGYNPRSLKEGLQEVLPWLRSSG  330 (334)
Q Consensus       306 ~~lG~~p~~~~e~i~~~~~~~~~~~  330 (334)
                      +.|||+|++++++|+++++++.+..
T Consensus       273 ~~~~~~~~~~~~gl~~~i~~~~~~~  297 (298)
T d1n2sa_         273 RNFDLILPQWELGVKRMLTEMFTTT  297 (298)
T ss_dssp             HHHTCCCCBHHHHHHHHHHHHHSCC
T ss_pred             HHHCCCCCcHHHHHHHHHHHHHhhc
Confidence            9999999999999999999998764

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3e-30  Score=211.34  Aligned_cols=199  Identities=20%  Similarity=0.161  Sum_probs=162.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWLP   81 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~~   81 (334)
                      ||+||||||+||++++++|+++|++|++++|++++...... .+++++.+|++|.+++.+++.++|+|||++|...    
T Consensus         5 kIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~~----   79 (205)
T d1hdoa_           5 KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGP-RPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRN----   79 (205)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSC-CCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTT----
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccc-cccccccccccchhhHHHHhcCCCEEEEEeccCC----
Confidence            69999999999999999999999999999999877654433 4799999999999999999999999999998632    


Q ss_pred             CcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHhhcCC
Q 019878           82 DPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAASEGL  161 (334)
Q Consensus        82 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~  161 (334)
                       .....+.+..++.+++++++++ +++|||++||..++++....+       +   ....|...|..+|+++++   .|+
T Consensus        80 -~~~~~~~~~~~~~~l~~aa~~~-~v~r~i~~ss~~~~~~~~~~~-------~---~~~~~~~~~~~~e~~l~~---~~~  144 (205)
T d1hdoa_          80 -DLSPTTVMSEGARNIVAAMKAH-GVDKVVACTSAFLLWDPTKVP-------P---RLQAVTDDHIRMHKVLRE---SGL  144 (205)
T ss_dssp             -CCSCCCHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCTTCSC-------G---GGHHHHHHHHHHHHHHHH---TCS
T ss_pred             -chhhhhhhHHHHHHHHHHHHhc-CCCeEEEEeeeeccCCCcccc-------c---cccccchHHHHHHHHHHh---cCC
Confidence             2233467889999999999998 799999999998887544221       1   135688999999988775   899


Q ss_pred             CEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC-CCCeEEecCC
Q 019878          162 PIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR-SGERYLLTGE  236 (334)
Q Consensus       162 ~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-~g~~~~i~g~  236 (334)
                      ++|++||+.+++....                ....+..++.....+++++|+|++++.+++++. .|+.+.++.+
T Consensus       145 ~~tiirp~~~~~~~~~----------------~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~s~~  204 (205)
T d1hdoa_         145 KYVAVMPPHIGDQPLT----------------GAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSHQ  204 (205)
T ss_dssp             EEEEECCSEEECCCCC----------------SCCEEESSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEECC
T ss_pred             ceEEEecceecCCCCc----------------ccEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCCCCCEEEecCCc
Confidence            9999999999875321                223345566777889999999999999999876 5887777643

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.6e-30  Score=215.84  Aligned_cols=206  Identities=19%  Similarity=0.140  Sum_probs=161.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC--eEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~   78 (334)
                      ++|||||||||||++|+++|+++|+  +|++++|++.+.... ....++...+|+.+.+.+..++.++|+|||++|....
T Consensus        15 k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~-~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~~~~   93 (232)
T d2bkaa1          15 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE-AYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTRG   93 (232)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG-GGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCCHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc-ccceeeeeeeccccccccccccccccccccccccccc
Confidence            4699999999999999999999884  899999987654432 2247899999999999999999999999999986321


Q ss_pred             CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHhh
Q 019878           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAAS  158 (334)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~  158 (334)
                       ..+...+.+.|+.++.+++++|.+. ++++||++||..+++...                +.|+.+|..+|+.+.+   
T Consensus        94 -~~~~~~~~~~~~~~~~~~~~~a~~~-~v~~fi~~Ss~~~~~~~~----------------~~Y~~~K~~~E~~l~~---  152 (232)
T d2bkaa1          94 -KAGAEGFVRVDRDYVLKSAELAKAG-GCKHFNLLSSKGADKSSN----------------FLYLQVKGEVEAKVEE---  152 (232)
T ss_dssp             -HHHHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTTCS----------------SHHHHHHHHHHHHHHT---
T ss_pred             -ccchhhhhhhcccccceeeeccccc-CccccccCCccccccCcc----------------chhHHHHHHhhhcccc---
Confidence             1234567889999999999999998 799999999998875432                6699999999998876   


Q ss_pred             cCCC-EEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCCCCeEEecC
Q 019878          159 EGLP-IVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTG  235 (334)
Q Consensus       159 ~g~~-~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g~~~~i~g  235 (334)
                      .+++ ++|+||+.+||++...  +....++..... ..+    ........+|++|+|++++.++..+..++++.+++
T Consensus       153 ~~~~~~~IlRP~~i~G~~~~~--~~~~~~~~~~~~-~~~----~~~~~~~~I~~~dvA~a~i~~~~~~~~~~~~i~~~  223 (232)
T d2bkaa1         153 LKFDRYSVFRPGVLLCDRQES--RPGEWLVRKFFG-SLP----DSWASGHSVPVVTVVRAMLNNVVRPRDKQMELLEN  223 (232)
T ss_dssp             TCCSEEEEEECCEEECTTGGG--SHHHHHHHHHHC-SCC----TTGGGGTEEEHHHHHHHHHHHHTSCCCSSEEEEEH
T ss_pred             ccccceEEecCceeecCCCcC--cHHHHHHHHHhh-ccC----CcccCCCeEEHHHHHHHHHHHHhcCccCCeEEEcH
Confidence            5665 8999999999987532  233333333332 221    22334457999999999999998887888888764

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.97  E-value=5.3e-32  Score=235.95  Aligned_cols=239  Identities=17%  Similarity=0.097  Sum_probs=182.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC-------CCCCCeEEEEcCCCChhhHHHHhcCCCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-------PSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a   73 (334)
                      +||||||||||||++|+++|+++|++|++++|+.......       ....+++++.+|+.|.+.+.+.+.+.++++|++
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~~~   83 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISAL   83 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhhhh
Confidence            5899999999999999999999999999999986543210       011369999999999999999999999999998


Q ss_pred             cccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHH
Q 019878           74 ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIA  153 (334)
Q Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~  153 (334)
                      +..         ....|..+..+++++|++. ...++++.||.+++.....         .+..+...|..+|..++...
T Consensus        84 ~~~---------~~~~~~~~~~~~l~~a~~~-~~~~~v~~Ss~g~~~~~~~---------~~~~~~~~~~~~~~~~~~~~  144 (312)
T d1qyda_          84 AGG---------VLSHHILEQLKLVEAIKEA-GNIKRFLPSEFGMDPDIME---------HALQPGSITFIDKRKVRRAI  144 (312)
T ss_dssp             CCS---------SSSTTTTTHHHHHHHHHHS-CCCSEEECSCCSSCTTSCC---------CCCSSTTHHHHHHHHHHHHH
T ss_pred             hhc---------ccccchhhhhHHHHHHHHh-cCCcEEEEeeccccCCCcc---------cccchhhhhhHHHHHHHHhh
Confidence            742         2245777788999999998 5677888888666543321         11122466888888877765


Q ss_pred             HHHhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC-CCCe-E
Q 019878          154 LQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR-SGER-Y  231 (334)
Q Consensus       154 ~~~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-~g~~-~  231 (334)
                      .+   .+++++++||+.+||+.........   ......+....+++++++.++|+|++|+|++++.++.++. .++. |
T Consensus       145 ~~---~~~~~~i~r~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~  218 (312)
T d1qyda_         145 EA---ASIPYTYVSSNMFAGYFAGSLAQLD---GHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMY  218 (312)
T ss_dssp             HH---TTCCBCEEECCEEHHHHTTTSSCTT---CCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEE
T ss_pred             cc---cccceEEeccceeecCCccchhhHH---HHhhhcccccccccccccccceeeHHHHHHHHHHHhcCccccCceEE
Confidence            54   7899999999999997432221111   1112245566678899999999999999999999998865 3554 5


Q ss_pred             Eec-CCCCCHHHHHHHHHHHhCCCCCcccccHHH
Q 019878          232 LLT-GENASFMQIFDMAAVITGTSRPRFCIPLWL  264 (334)
Q Consensus       232 ~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~  264 (334)
                      +++ ++.+|+.|+++.+.+++|.+.+...+|.+.
T Consensus       219 ~~~~~~~~s~~e~~~~~~~~~g~~~~~~~i~~~~  252 (312)
T d1qyda_         219 IRPPMNILSQKEVIQIWERLSEQNLDKIYISSQD  252 (312)
T ss_dssp             CCCGGGEEEHHHHHHHHHHHHTCCCEECCBCSHH
T ss_pred             EeCCCcCCCHHHHHHHHHHHHCCCCeEEECCHHH
Confidence            565 467999999999999999998888887653

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.97  E-value=1.2e-30  Score=226.21  Aligned_cols=233  Identities=23%  Similarity=0.256  Sum_probs=177.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC--------CCCCeEEEEcCCCChhhHHHHhcCCCEEEEe
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP--------SEGALELVYGDVTDYRSLVDACFGCHVIFHT   72 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~   72 (334)
                      +||||||||||||++|+++|+++|++|++++|++.......        ...+++++.+|+.+...+.+.+++++.|+|+
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi~~   83 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIST   83 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeeeec
Confidence            58999999999999999999999999999999876543211        0136899999999999999999999999999


Q ss_pred             ccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHH
Q 019878           73 AALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKI  152 (334)
Q Consensus        73 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~  152 (334)
                      ++.             .+..+..++++++... +++++++.||........       ....   +...+...+...+..
T Consensus        84 ~~~-------------~~~~~~~~~~~a~~~~-~~~~~~~~s~~~~~~~~~-------~~~~---~~~~~~~~~~~~~~~  139 (307)
T d1qyca_          84 VGS-------------LQIESQVNIIKAIKEV-GTVKRFFPSEFGNDVDNV-------HAVE---PAKSVFEVKAKVRRA  139 (307)
T ss_dssp             CCG-------------GGSGGGHHHHHHHHHH-CCCSEEECSCCSSCTTSC-------CCCT---THHHHHHHHHHHHHH
T ss_pred             ccc-------------cccchhhHHHHHHHHh-ccccceeeeccccccccc-------cccc---cccccccccccccch
Confidence            874             2444567888899888 678888888754433221       1111   123456666666666


Q ss_pred             HHHHhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCC-CCC-e
Q 019878          153 ALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGR-SGE-R  230 (334)
Q Consensus       153 ~~~~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-~g~-~  230 (334)
                      +.+   .+++++++||+++||++....    ..+......+....+++.+++.++|+|++|+|+++..++.++. .++ +
T Consensus       140 ~~~---~~~~~~i~r~~~v~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~  212 (307)
T d1qyca_         140 IEA---EGIPYTYVSSNCFAGYFLRSL----AQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTL  212 (307)
T ss_dssp             HHH---HTCCBEEEECCEEHHHHTTTT----TCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEE
T ss_pred             hhc---cCCCceecccceecCCCccch----hhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcCcee
Confidence            554   789999999999999754321    1222233455566677889999999999999999999998764 344 5


Q ss_pred             EEec-CCCCCHHHHHHHHHHHhCCCCCcccccHHH
Q 019878          231 YLLT-GENASFMQIFDMAAVITGTSRPRFCIPLWL  264 (334)
Q Consensus       231 ~~i~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~  264 (334)
                      |+++ ++.+|+.|+++.+.+++|.+.+...+|.+.
T Consensus       213 ~~~~~~~~~s~~ei~~~~~~~~G~~~~~~~~~~~~  247 (307)
T d1qyca_         213 YLRLPANTLSLNELVALWEKKIDKTLEKAYVPEEE  247 (307)
T ss_dssp             ECCCGGGEEEHHHHHHHHHHHTTSCCEEEEECHHH
T ss_pred             EEeCCCCccCHHHHHHHHHHHHCCCCcEEECCHHH
Confidence            6665 578999999999999999998887777654

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.95  E-value=7.9e-28  Score=202.00  Aligned_cols=224  Identities=19%  Similarity=0.169  Sum_probs=163.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCe--EEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCC-
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHS--VRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP-   78 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~-   78 (334)
                      ||||||||||||+++++.|+++|++  |+.+.|++.+...+..  +++++.+|+.+.+.+.++++++|+|||+|+.... 
T Consensus         5 tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~~~   82 (252)
T d2q46a1           5 TVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG--EADVFIGDITDADSINPAFQGIDALVILTSAVPKM   82 (252)
T ss_dssp             EEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC--CTTEEECCTTSHHHHHHHHTTCSEEEECCCCCCEE
T ss_pred             EEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC--CcEEEEeeeccccccccccccceeeEEEEeecccc
Confidence            7999999999999999999999976  5556776654433333  7899999999999999999999999999986321 


Q ss_pred             --------------CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHH
Q 019878           79 --------------WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (334)
Q Consensus        79 --------------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (334)
                                    ..........+|+.++.++++.+... ..+++.+.|+..++......         ...+...|..
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~---------~~~~~~~~~~  152 (252)
T d2q46a1          83 KPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-GVKHIVVVGSMGGTNPDHPL---------NKLGNGNILV  152 (252)
T ss_dssp             CTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-TCSEEEEEEETTTTCTTCGG---------GGGGGCCHHH
T ss_pred             ccccchhhhhhcccccccchhhhccccccceeeccccccc-cccccccccccccCCCCccc---------ccccccchhh
Confidence                          11234556788999999999999988 68899998887665432211         1112355777


Q ss_pred             HHHHHHHHHHHHhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhc
Q 019878          145 SKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEK  224 (334)
Q Consensus       145 sK~~~E~~~~~~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~  224 (334)
                      .+.+.+.+...   .|++++++||+++||+......         ...+.....   .....+|+|++|+|++++.++++
T Consensus       153 ~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~---------~~~~~~~~~---~~~~~~~i~~~Dva~a~~~~l~~  217 (252)
T d2q46a1         153 WKRKAEQYLAD---SGTPYTIIRAGGLLDKEGGVRE---------LLVGKDDEL---LQTDTKTVPRADVAEVCIQALLF  217 (252)
T ss_dssp             HHHHHHHHHHH---SSSCEEEEEECEEECSCTTSSC---------EEEESTTGG---GGSSCCEEEHHHHHHHHHHHTTC
T ss_pred             hhhhhhhhhhc---ccccceeecceEEECCCcchhh---------hhhccCccc---ccCCCCeEEHHHHHHHHHHHhCC
Confidence            77776665554   7999999999999999653211         011111111   23446799999999999999988


Q ss_pred             CC-CCCeEEecC-C---CCCHHHHHHHHHHHhC
Q 019878          225 GR-SGERYLLTG-E---NASFMQIFDMAAVITG  252 (334)
Q Consensus       225 ~~-~g~~~~i~g-~---~~s~~e~~~~i~~~~g  252 (334)
                      +. .|++||+++ +   ..++.++.+++.++.+
T Consensus       218 ~~~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~~  250 (252)
T d2q46a1         218 EEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTS  250 (252)
T ss_dssp             GGGTTEEEEEEECCTTTSCCCCCHHHHHTTCCC
T ss_pred             ccccCcEEEEeeCCCCCChhHHHHHHHHHHHHh
Confidence            75 578999963 2   3567777777765543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.95  E-value=1.8e-27  Score=195.83  Aligned_cols=193  Identities=17%  Similarity=0.177  Sum_probs=139.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC--eEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc-CCCEEEEeccccC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-GCHVIFHTAALVE   77 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-~~d~vih~a~~~~   77 (334)
                      +||||||||||||++|+++|+++|+  +|+++.|++....     +.+   ..+..|..++...+. .+|+|||++|...
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~-----~~~---~~~~~d~~~~~~~~~~~~d~vi~~~g~~~   74 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEH-----PRL---DNPVGPLAELLPQLDGSIDTAFCCLGTTI   74 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCC-----TTE---ECCBSCHHHHGGGCCSCCSEEEECCCCCH
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhc-----ccc---cccccchhhhhhccccchheeeeeeeeec
Confidence            4799999999999999999999997  5666666543211     133   345555555544443 4899999998743


Q ss_pred             CCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHh
Q 019878           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA  157 (334)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~  157 (334)
                      ....+...+...|+.++.+++++|++. ++++|+++||.++++...                +.|+.+|..+|+.+++  
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~a~~~-~v~~~i~~Ss~~~~~~~~----------------~~y~~~K~~~E~~l~~--  135 (212)
T d2a35a1          75 KEAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVSALGADAKSS----------------IFYNRVKGELEQALQE--  135 (212)
T ss_dssp             HHHSSHHHHHHHHTHHHHHHHHHHHHT-TCCEEEEECCTTCCTTCS----------------SHHHHHHHHHHHHHTT--
T ss_pred             cccccccccccchhhhhhhcccccccc-cccccccccccccccccc----------------cchhHHHHHHhhhccc--
Confidence            333445678899999999999999997 799999999988876432                6699999999998765  


Q ss_pred             hcCCC-EEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcCCCCCeE
Q 019878          158 SEGLP-IVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKGRSGERY  231 (334)
Q Consensus       158 ~~g~~-~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~g~~~  231 (334)
                       .+++ ++|+||+.+||+.+.....   ..+     ......  .....+++||++|+|+++..+++++..|..|
T Consensus       136 -~~~~~~~I~Rp~~v~G~~~~~~~~---~~~-----~~~~~~--~~~~~~~~i~v~DvA~ai~~~~~~~~~g~~~  199 (212)
T d2a35a1         136 -QGWPQLTIARPSLLFGPREEFRLA---EIL-----AAPIAR--ILPGKYHGIEACDLARALWRLALEEGKGVRF  199 (212)
T ss_dssp             -SCCSEEEEEECCSEESTTSCEEGG---GGT-----TCCCC------CHHHHHHHHHHHHHHHHHHTCCCSEEEE
T ss_pred             -cccccceeeCCcceeCCcccccHH---HHH-----HHHHhh--ccCCCCcEEEHHHHHHHHHHHHcCCCCCCEE
Confidence             5664 9999999999997642111   111     111111  1123456799999999999999987766443

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.94  E-value=5.2e-27  Score=207.80  Aligned_cols=234  Identities=20%  Similarity=0.128  Sum_probs=170.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC--CCCCCCCeEEEEcCCCChhh-HHHHhcCCCEEEEeccccC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS--GLPSEGALELVYGDVTDYRS-LVDACFGCHVIFHTAALVE   77 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~v~~~~~Dl~d~~~-~~~~~~~~d~vih~a~~~~   77 (334)
                      ++|||||||||||++|++.|+++||+|+++.|++.+..  .+...++++++.+|+.|..+ +..++.++|++++....  
T Consensus         4 ktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~~--   81 (350)
T d1xgka_           4 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS--   81 (350)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS--
T ss_pred             CEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeeccc--
Confidence            47999999999999999999999999999999876432  12233489999999998654 66788889988876542  


Q ss_pred             CCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHHh
Q 019878           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQAA  157 (334)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~  157 (334)
                              ....|+..+.+++++|.+. +++++|+.||...........            ..+|..+|...|.++.+  
T Consensus        82 --------~~~~~~~~~~~~~~aa~~a-gv~~~v~~Ss~~~~~~~~~~~------------~~~~~~~k~~~~~~~~~--  138 (350)
T d1xgka_          82 --------QAGDEIAIGKDLADAAKRA-GTIQHYIYSSMPDHSLYGPWP------------AVPMWAPKFTVENYVRQ--  138 (350)
T ss_dssp             --------TTSCHHHHHHHHHHHHHHH-SCCSEEEEEECCCGGGTSSCC------------CCTTTHHHHHHHHHHHT--
T ss_pred             --------ccchhhhhhhHHHHHHHHh-CCCceEEEeeccccccCCccc------------chhhhhhHHHHHHHHHh--
Confidence                    1245778889999999998 688888888865544332211            24577888888877665  


Q ss_pred             hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCC-CCccccCCCCceeeeeH-HHHHHHHHHHhhcCC---CCCeEE
Q 019878          158 SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGR-LPGYIGYGNDRFSFCHV-DDVVDGHIAAMEKGR---SGERYL  232 (334)
Q Consensus       158 ~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v-~D~a~a~~~~~~~~~---~g~~~~  232 (334)
                       .+++++++|++.+++.........+..  .....+. ....+.+++..++++++ +|+++++..++..+.   .|++|+
T Consensus       139 -~~~~~~~vr~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~~  215 (350)
T d1xgka_         139 -LGLPSTFVYAGIYNNNFTSLPYPLFQM--ELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIA  215 (350)
T ss_dssp             -SSSCEEEEEECEEGGGCBSSSCSSCBE--EECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEE
T ss_pred             -hccCceeeeeceeeccccccccccccc--cccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEEE
Confidence             678999999999887532111100000  0000111 11233457788889986 799999999987542   588999


Q ss_pred             ecCCCCCHHHHHHHHHHHhCCCCCcccccH
Q 019878          233 LTGENASFMQIFDMAAVITGTSRPRFCIPL  262 (334)
Q Consensus       233 i~g~~~s~~e~~~~i~~~~g~~~~~~~~~~  262 (334)
                      ++++.+|+.|+++.+.+++|++.+...+|.
T Consensus       216 ~~g~~~T~~eia~~l~~~~G~~v~~~~vp~  245 (350)
T d1xgka_         216 LTFETLSPVQVCAAFSRALNRRVTYVQVPK  245 (350)
T ss_dssp             ECSEEECHHHHHHHHHHHHTSCEEEEECSS
T ss_pred             EeCCcCCHHHHHHHHHHHHCCcceEEECCH
Confidence            998889999999999999999876655553

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.85  E-value=8.1e-21  Score=157.51  Aligned_cols=202  Identities=20%  Similarity=0.169  Sum_probs=146.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~a~   74 (334)
                      ++|||||++.||.++++.|+++|++|++++|+.+...      ++..+.+|++|.+++.++++       ++|++||+||
T Consensus         9 ~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG   82 (237)
T d1uzma1           9 SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK------GLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAG   82 (237)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT------TSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhc------CceEEEEecCCHHHHHHHHHHHHHhcCCceEEEeeec
Confidence            6999999999999999999999999999999876543      56789999999998877664       4899999999


Q ss_pred             ccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChHHHH
Q 019878           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (334)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (334)
                      ....      ..++++..+++|+.++..+.+.+.+.   .+..++|++||.........              ...|+.+
T Consensus        83 ~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~--------------~~~Y~as  148 (237)
T d1uzma1          83 LSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGN--------------QANYAAS  148 (237)
T ss_dssp             CCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----C--------------CHHHHHH
T ss_pred             ccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcc--------------cHHHHHH
Confidence            7322      23356678999999998887766443   24569999999776543322              2669999


Q ss_pred             HHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHH
Q 019878          146 KAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAA  221 (334)
Q Consensus       146 K~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~  221 (334)
                      |.+.+.+.+.+    .++|+++..+.||.+..+..    ..+.....+......|        ..-+...+|+|+++..+
T Consensus       149 Kaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~----~~~~~~~~~~~~~~~p--------l~R~~~pedvA~~v~fL  216 (237)
T d1uzma1         149 KAGVIGMARSIARELSKANVTANVVAPGYIDTDMT----RALDERIQQGALQFIP--------AKRVGTPAEVAGVVSFL  216 (237)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH----HHSCHHHHHHHGGGCT--------TCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhh----hccCHHHHHHHHhcCC--------CCCCcCHHHHHHHHHHH
Confidence            99887766654    45799999999999965421    1111112222222211        11356799999999998


Q ss_pred             hhcC---CCCCeEEecC
Q 019878          222 MEKG---RSGERYLLTG  235 (334)
Q Consensus       222 ~~~~---~~g~~~~i~g  235 (334)
                      +...   -+|+++.+.|
T Consensus       217 ~S~~s~~itG~~i~vdG  233 (237)
T d1uzma1         217 ASEDASYISGAVIPVDG  233 (237)
T ss_dssp             HSGGGTTCCSCEEEEST
T ss_pred             hCchhcCCcCCeEEECC
Confidence            8643   3699999854

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.85  E-value=6.1e-21  Score=158.87  Aligned_cols=207  Identities=19%  Similarity=0.146  Sum_probs=150.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~a~   74 (334)
                      ++|||||++.||.++++.|+++|++|++.+|++++.+...+..+++++.+|++|++++.++++       .+|++||+||
T Consensus         7 ~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG   86 (242)
T d1ulsa_           7 AVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAG   86 (242)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEECCc
Confidence            399999999999999999999999999999987654433223367899999999998877763       4899999999


Q ss_pred             ccCC------CCCCcccchhhhhHHHHHHHHHHHhcC---CCcEEEEecccceeccCCCccCCCCCccccccccChHHHH
Q 019878           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (334)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (334)
                      ....      ..++++..+++|+.++..+.+++.+..   +..+++++||....+...               ...|+.+
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~~~---------------~~~Y~as  151 (242)
T d1ulsa_          87 ITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNLG---------------QANYAAS  151 (242)
T ss_dssp             CCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCTT---------------CHHHHHH
T ss_pred             ccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCCCC---------------CcchHHH
Confidence            7432      223466788999999999999887652   334677777754332211               2679999


Q ss_pred             HHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHH
Q 019878          146 KAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAA  221 (334)
Q Consensus       146 K~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~  221 (334)
                      |.+.+.+.+.+    .++|+++..+.||.+-.+.......   ..........+.         .-+...+|+|+++..+
T Consensus       152 Kaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~---~~~~~~~~~~pl---------~R~~~pedia~~v~fL  219 (242)
T d1ulsa_         152 MAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPE---KVREKAIAATPL---------GRAGKPLEVAYAALFL  219 (242)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCH---HHHHHHHHTCTT---------CSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCH---HHHHHHHhcCCC---------CCCCCHHHHHHHHHHH
Confidence            99887766654    4679999999999998765332221   222222222222         1255699999999998


Q ss_pred             hhcC---CCCCeEEecC
Q 019878          222 MEKG---RSGERYLLTG  235 (334)
Q Consensus       222 ~~~~---~~g~~~~i~g  235 (334)
                      +...   -+|+++.+.|
T Consensus       220 ~S~~s~~itG~~i~vDG  236 (242)
T d1ulsa_         220 LSDESSFITGQVLFVDG  236 (242)
T ss_dssp             HSGGGTTCCSCEEEEST
T ss_pred             hchhhCCCCCcEEEECC
Confidence            8643   3699999954

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=3e-21  Score=160.88  Aligned_cols=208  Identities=17%  Similarity=0.169  Sum_probs=151.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC--CCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      ++|||||++.||.++++.|+++|++|++.+|+++..+.+.+.  .+..++.+|++|.+++.++++       ++|++||+
T Consensus         6 ~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnn   85 (243)
T d1q7ba_           6 IALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNN   85 (243)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEEC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcceehhh
Confidence            589999999999999999999999999999987654322111  267889999999988877764       48999999


Q ss_pred             ccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChHH
Q 019878           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (334)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (334)
                      ||....      ..+++...+++|+.++..+.+++.++   ++-.++|++||.....+.+.              .+.|+
T Consensus        86 Ag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~--------------~~~Y~  151 (243)
T d1q7ba_          86 AGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGG--------------QANYA  151 (243)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT--------------CHHHH
T ss_pred             hhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCC--------------CHHHH
Confidence            987432      22345678899999999999988654   13468999999876644332              26799


Q ss_pred             HHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHH
Q 019878          144 RSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHI  219 (334)
Q Consensus       144 ~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  219 (334)
                      .+|.+.+.+.+.+    .++|+++..+.||.+-.+...   ............. .|        ..-+...+|+|+++.
T Consensus       152 asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~---~~~~~~~~~~~~~-~p--------l~R~~~pedvA~~v~  219 (243)
T d1q7ba_         152 AAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTR---ALSDDQRAGILAQ-VP--------AGRLGGAQEIANAVA  219 (243)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH---TSCHHHHHHHHTT-CT--------TSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhh---hhhhhHHHHHHhc-CC--------CCCCCCHHHHHHHHH
Confidence            9999887776654    467999999999988654211   1111222222222 21        123567999999999


Q ss_pred             HHhhcC---CCCCeEEecC
Q 019878          220 AAMEKG---RSGERYLLTG  235 (334)
Q Consensus       220 ~~~~~~---~~g~~~~i~g  235 (334)
                      .++...   -+|+++++.|
T Consensus       220 fL~S~~s~~itGq~i~vdG  238 (243)
T d1q7ba_         220 FLASDEAAYITGETLHVNG  238 (243)
T ss_dssp             HHHSGGGTTCCSCEEEEST
T ss_pred             HHhCchhcCCcCCeEEECC
Confidence            998643   3799999964

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.83  E-value=1.4e-20  Score=156.60  Aligned_cols=211  Identities=22%  Similarity=0.238  Sum_probs=150.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC-CCCCCeEEEEcCCCChhhHHHHhcC---CCEEEEecccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-PSEGALELVYGDVTDYRSLVDACFG---CHVIFHTAALV   76 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~---~d~vih~a~~~   76 (334)
                      +++|||||++.||.++++.|+++|++|++.+|++++...+ .+.+++.++.+|++|.+++.+++++   +|++||+||..
T Consensus         6 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnAg~~   85 (242)
T d1cyda_           6 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAALV   85 (242)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECCccc
Confidence            4699999999999999999999999999999986543221 1113688999999999999998874   89999999974


Q ss_pred             CC------CCCCcccchhhhhHHHHHHHHHHHhc----CCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHH
Q 019878           77 EP------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSK  146 (334)
Q Consensus        77 ~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK  146 (334)
                      ..      ..++++..+++|+.++..+.+++.+.    +.-.++|++||.......+.              ...|+.+|
T Consensus        86 ~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~--------------~~~Y~asK  151 (242)
T d1cyda_          86 IMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPN--------------LITYSSTK  151 (242)
T ss_dssp             CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT--------------BHHHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCc--------------cccccchH
Confidence            32      22345668899999999998876542    23458999999865543332              26699999


Q ss_pred             HHHHHHHHHH----hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHh
Q 019878          147 AVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAM  222 (334)
Q Consensus       147 ~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~  222 (334)
                      .+.+.+.+.+    .++|+++..+-||.+-.+...... .-...........+         ..-+...+|+++++..++
T Consensus       152 aal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~-~~~~~~~~~~~~~p---------l~R~~~peeva~~v~fL~  221 (242)
T d1cyda_         152 GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVS-ADPEFARKLKERHP---------LRKFAEVEDVVNSILFLL  221 (242)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHT-CCHHHHHHHHHHST---------TSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhc-CCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHh
Confidence            9888777664    457999999999988654210000 00111222221111         123567999999999988


Q ss_pred             hcC---CCCCeEEecC
Q 019878          223 EKG---RSGERYLLTG  235 (334)
Q Consensus       223 ~~~---~~g~~~~i~g  235 (334)
                      ...   -+|+++.+.|
T Consensus       222 S~~s~~itG~~i~vDG  237 (242)
T d1cyda_         222 SDRSASTSGGGILVDA  237 (242)
T ss_dssp             SGGGTTCCSSEEEEST
T ss_pred             CchhcCcCCceEEeCc
Confidence            643   3689999865

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.83  E-value=8.1e-21  Score=159.07  Aligned_cols=208  Identities=17%  Similarity=0.177  Sum_probs=149.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CCC-CCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPS-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      .+|||||++.||.++++.|+++|++|++.+|+++..+.    +.. ..++.++.+|++|.+++.++++       .+|++
T Consensus        12 valITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDil   91 (251)
T d2c07a1          12 VALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDIL   91 (251)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCceee
Confidence            58999999999999999999999999999998654321    111 1368999999999998877764       48999


Q ss_pred             EEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        70 ih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      ||+||....      ..+++...+++|+.++..+.+++.+.   ++-.++|++||.......+.              ..
T Consensus        92 vnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~--------------~~  157 (251)
T d2c07a1          92 VNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVG--------------QA  157 (251)
T ss_dssp             EECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT--------------CH
T ss_pred             eeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCC--------------CH
Confidence            999997332      22345678899999999988876543   13469999999876543322              26


Q ss_pred             hHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHH
Q 019878          141 QYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVD  216 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  216 (334)
                      .|+.+|.+.+.+.+.+    .++|+++..+.||.+-.+.....   ............+.         .-+...+|+|+
T Consensus       158 ~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~---~~~~~~~~~~~~pl---------~R~~~pedvA~  225 (251)
T d2c07a1         158 NYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI---SEQIKKNIISNIPA---------GRMGTPEEVAN  225 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C---CHHHHHHHHTTCTT---------SSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccccc---CHHHHHHHHhcCCC---------CCCcCHHHHHH
Confidence            6999999888777664    46799999999999987643211   12222222222221         12667999999


Q ss_pred             HHHHHhhcC---CCCCeEEecC
Q 019878          217 GHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       217 a~~~~~~~~---~~g~~~~i~g  235 (334)
                      ++..++...   -+|+++.+.|
T Consensus       226 ~v~fL~S~~s~~itG~~i~vDG  247 (251)
T d2c07a1         226 LACFLSSDKSGYINGRVFVIDG  247 (251)
T ss_dssp             HHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHhCchhCCCcCcEEEECC
Confidence            999988643   2689999864

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.83  E-value=1.1e-20  Score=157.31  Aligned_cols=203  Identities=20%  Similarity=0.215  Sum_probs=148.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      ++|||||++.||.++++.|+++|++|++.+|++++.+.+.+  .+++.++.+|++|.+++.++++       .+|++||+
T Consensus         8 ~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idilinn   87 (244)
T d1nffa_           8 VALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNN   87 (244)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeEEEEC
Confidence            58999999999999999999999999999998754332111  1368899999999998877664       48999999


Q ss_pred             ccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChHH
Q 019878           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (334)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (334)
                      ||....      ..+++...+++|+.++..+.+.+.+.   ++-.++|++||...+.+...              ...|+
T Consensus        88 AG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~--------------~~~Y~  153 (244)
T d1nffa_          88 AGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVA--------------CHGYT  153 (244)
T ss_dssp             CCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT--------------BHHHH
T ss_pred             CcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccccccccc--------------ccchh
Confidence            997432      22345678999999999998877444   13458999999876544332              26699


Q ss_pred             HHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHH
Q 019878          144 RSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHI  219 (334)
Q Consensus       144 ~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  219 (334)
                      .+|+..+.+.+.+    .++|+++..+-||.+-.+.....            .....     .....-+...+|+|+++.
T Consensus       154 asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~------------~~~~~-----~~pl~R~~~p~diA~~v~  216 (244)
T d1nffa_         154 ATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWV------------PEDIF-----QTALGRAAEPVEVSNLVV  216 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTS------------CTTCS-----CCSSSSCBCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhh------------hHHHH-----hccccCCCCHHHHHHHHH
Confidence            9999887766654    46799999999999876531100            00000     011223678999999999


Q ss_pred             HHhhcC---CCCCeEEecC
Q 019878          220 AAMEKG---RSGERYLLTG  235 (334)
Q Consensus       220 ~~~~~~---~~g~~~~i~g  235 (334)
                      .++...   -+|+++.+.|
T Consensus       217 fL~s~~s~~itG~~i~vDG  235 (244)
T d1nffa_         217 YLASDESSYSTGAEFVVDG  235 (244)
T ss_dssp             HHHSGGGTTCCSCEEEEST
T ss_pred             HHhChhhCCCcCCEEEECC
Confidence            998543   3699999964

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.83  E-value=2.1e-20  Score=156.03  Aligned_cols=211  Identities=18%  Similarity=0.160  Sum_probs=147.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~a~   74 (334)
                      ++|||||++.||.++++.|+++|++|++.+|+++..+.. +..+..++++|++|.+++.++++       ++|++||+||
T Consensus         7 ~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG   85 (248)
T d2d1ya1           7 GVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVA-EAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAA   85 (248)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHH-HHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEEeCc
Confidence            699999999999999999999999999999987542211 11256789999999988777664       4899999999


Q ss_pred             ccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChHHHH
Q 019878           75 LVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERS  145 (334)
Q Consensus        75 ~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~s  145 (334)
                      ....      ..++++..+++|+.++.++.+++.++   ++-.++|++||...+.+.+.              ...|+.+
T Consensus        86 ~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~--------------~~~Y~as  151 (248)
T d2d1ya1          86 IAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQE--------------NAAYNAS  151 (248)
T ss_dssp             CCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTT--------------BHHHHHH
T ss_pred             CCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccc--------------cchhHHH
Confidence            7432      22345678899999999999988765   23458999999876544322              3679999


Q ss_pred             HHHHHHHHHH----HhhcCCCEEEEecCceecCCCCCc--hhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHH
Q 019878          146 KAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTT--GNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHI  219 (334)
Q Consensus       146 K~~~E~~~~~----~~~~g~~~~ilR~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  219 (334)
                      |...+.+.+.    +.++|+++..+.||.+-.+.....  ....+....+......        ...-+...+|+++++.
T Consensus       152 Kaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~--------pl~R~~~pedia~~v~  223 (248)
T d2d1ya1         152 KGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLH--------ALRRLGKPEEVAEAVL  223 (248)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTS--------TTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcC--------CCCCCcCHHHHHHHHH
Confidence            9987776665    456799999999999865310000  0000000111111111        1223667999999999


Q ss_pred             HHhhcC---CCCCeEEecC
Q 019878          220 AAMEKG---RSGERYLLTG  235 (334)
Q Consensus       220 ~~~~~~---~~g~~~~i~g  235 (334)
                      .++...   -+|+++.+.|
T Consensus       224 fL~S~~s~~itG~~i~vDG  242 (248)
T d2d1ya1         224 FLASEKASFITGAILPVDG  242 (248)
T ss_dssp             HHHSGGGTTCCSCEEEEST
T ss_pred             HHhCchhcCCCCcEEEcCc
Confidence            998543   3699999964

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.2e-20  Score=157.45  Aligned_cols=210  Identities=21%  Similarity=0.234  Sum_probs=151.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-CCCCeEEEEcCCCChhhHHHHhcC---CCEEEEeccccC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-SEGALELVYGDVTDYRSLVDACFG---CHVIFHTAALVE   77 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~~---~d~vih~a~~~~   77 (334)
                      ++|||||++.||.++++.|+++|++|++++|++++.+.+. +.+++..+.+|++|.+++.+++++   +|++||+||...
T Consensus         9 ~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnnAg~~~   88 (244)
T d1pr9a_           9 RVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAAVAL   88 (244)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCCCCC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEecccccc
Confidence            6999999999999999999999999999999876543211 113688999999999999888864   899999999743


Q ss_pred             C------CCCCcccchhhhhHHHHHHHHHHHhc----CCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHH
Q 019878           78 P------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKA  147 (334)
Q Consensus        78 ~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~  147 (334)
                      .      ..++++..+++|+.++..+.+++.+.    ....++|++||.......+.              ...|+.+|.
T Consensus        89 ~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~--------------~~~Y~asKa  154 (244)
T d1pr9a_          89 LQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTN--------------HSVYCSTKG  154 (244)
T ss_dssp             CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT--------------BHHHHHHHH
T ss_pred             ccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccc--------------hhhhhhhHH
Confidence            2      22345678899999999988877552    23468999999876543332              266999999


Q ss_pred             HHHHHHHHH----hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhh
Q 019878          148 VADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAME  223 (334)
Q Consensus       148 ~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~  223 (334)
                      +.+.+.+.+    .++|+++..+.||.+..+....... -.......... .|        ...+...+|+|+++..++.
T Consensus       155 al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~-~~~~~~~~~~~-~p--------l~R~~~peevA~~v~fL~S  224 (244)
T d1pr9a_         155 ALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWS-DPHKAKTMLNR-IP--------LGKFAEVEHVVNAILFLLS  224 (244)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSC-SHHHHHHHHTT-CT--------TCSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhcc-ChHHHHHHHhc-CC--------CCCCcCHHHHHHHHHHHhC
Confidence            888777654    4569999999999997652100000 01112222222 22        1236679999999999886


Q ss_pred             cC---CCCCeEEecC
Q 019878          224 KG---RSGERYLLTG  235 (334)
Q Consensus       224 ~~---~~g~~~~i~g  235 (334)
                      ..   -+|+++.+.|
T Consensus       225 ~~a~~itG~~i~vDG  239 (244)
T d1pr9a_         225 DRSGMTTGSTLPVEG  239 (244)
T ss_dssp             GGGTTCCSCEEEEST
T ss_pred             chhCCcCCcEEEECc
Confidence            43   3688998864

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.83  E-value=2.1e-20  Score=156.50  Aligned_cols=208  Identities=14%  Similarity=0.117  Sum_probs=147.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      ++|||||++.||.++++.|+++|++|++.+|+.++...+.+  ..++.++.+|++|.+++.++++       ++|++||+
T Consensus         7 ~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnn   86 (254)
T d1hdca_           7 TVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNN   86 (254)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             EEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEEEec
Confidence            68999999999999999999999999999998754322111  1368999999999998877763       48999999


Q ss_pred             ccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChHH
Q 019878           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (334)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (334)
                      ||....      ..+++...+++|+.++..+.+++.++   ++-.++|++||...+.....              ...|+
T Consensus        87 Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~--------------~~~Y~  152 (254)
T d1hdca_          87 AGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLAL--------------TSSYG  152 (254)
T ss_dssp             CCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT--------------CHHHH
T ss_pred             CccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccc--------------hhhHH
Confidence            997432      22345678899999999999988543   23469999999876543322              26799


Q ss_pred             HHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceee-eeHHHHHHHH
Q 019878          144 RSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSF-CHVDDVVDGH  218 (334)
Q Consensus       144 ~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~v~D~a~a~  218 (334)
                      .+|.+.+.+.+.+    .++|+++..+.||.+..+       +.    .............. ....-+ ...+|+|+++
T Consensus       153 asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~-------~~----~~~~~~~~~~~~~~-~pl~R~g~~PedvA~~v  220 (254)
T d1hdca_         153 ASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTP-------MT----AETGIRQGEGNYPN-TPMGRVGNEPGEIAGAV  220 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH-------HH----HHHTCCCSTTSCTT-STTSSCB-CHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCc-------cc----hhcCHHHHHHHHhC-CCCCCCCCCHHHHHHHH
Confidence            9999887766654    467999999999998543       11    11111111111100 011112 3579999999


Q ss_pred             HHHhhcC---CCCCeEEecC
Q 019878          219 IAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       219 ~~~~~~~---~~g~~~~i~g  235 (334)
                      ..++...   -+|+++.+.|
T Consensus       221 ~fL~S~~a~~itG~~i~vDG  240 (254)
T d1hdca_         221 VKLLSDTSSYVTGAELAVDG  240 (254)
T ss_dssp             HHHHSGGGTTCCSCEEEEST
T ss_pred             HHHhchhhCCCCCceEEeCC
Confidence            9998643   3699999964

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.82  E-value=1e-20  Score=158.76  Aligned_cols=210  Identities=16%  Similarity=0.170  Sum_probs=150.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CC-CCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||++.||.++++.|+++|++|++.+|++++.+.+    .. ..++.++.+|++|++++.++++       ++|++
T Consensus        13 ~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~iDil   92 (255)
T d1fmca_          13 CAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDIL   92 (255)
T ss_dssp             EEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEe
Confidence            599999999999999999999999999999986543211    11 1368899999999988877653       58999


Q ss_pred             EEeccccCC-----CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccCh
Q 019878           70 FHTAALVEP-----WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (334)
Q Consensus        70 ih~a~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  141 (334)
                      ||+||....     ..++++..+++|+.++..+.+.+..+   .+-.++|++||...+...+.              ...
T Consensus        93 vnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~--------------~~~  158 (255)
T d1fmca_          93 VNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNIN--------------MTS  158 (255)
T ss_dssp             EECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT--------------CHH
T ss_pred             eeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccc--------------ccc
Confidence            999997432     22345678899999999998877654   13458999999766543322              367


Q ss_pred             HHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHH
Q 019878          142 YERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDG  217 (334)
Q Consensus       142 Y~~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  217 (334)
                      |+.+|.+.+.+.+.+    .++|+++..+.||.+-.+.....  .-........+..+.         .-+...+|+|++
T Consensus       159 Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~--~~~e~~~~~~~~~pl---------~R~g~pedvA~~  227 (255)
T d1fmca_         159 YASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV--ITPEIEQKMLQHTPI---------RRLGQPQDIANA  227 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT--CCHHHHHHHHHTCSS---------CSCBCHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhcc--CCHHHHHHHHhcCCC---------CCCcCHHHHHHH
Confidence            999999887766654    46799999999999965421000  001222222222221         125668999999


Q ss_pred             HHHHhhcC---CCCCeEEecCC
Q 019878          218 HIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       218 ~~~~~~~~---~~g~~~~i~g~  236 (334)
                      +..++...   -+|+++.+.|.
T Consensus       228 v~fL~S~~s~~itG~~i~vDGG  249 (255)
T d1fmca_         228 ALFLCSPAASWVSGQILTVSGG  249 (255)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHhCchhcCCcCCEEEECcC
Confidence            99998643   37999999653

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.82  E-value=4.1e-20  Score=155.28  Aligned_cols=216  Identities=22%  Similarity=0.202  Sum_probs=147.6

Q ss_pred             c-EEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC----C-CCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 K-ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~-ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      | +|||||++.||.++++.|+++|++|++.+|++++.+.+.    . ..++.++.+|++|.+++.++++       ++|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            5 599999999999999999999999999999875432211    1 1368889999999998877763       4899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHh----cCCCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKE----TKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      +||+||....      ..++++..+++|+.++..+++++.+    .+...++|++||...+.+.+.              
T Consensus        82 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~--------------  147 (255)
T d1gega_          82 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPE--------------  147 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT--------------
T ss_pred             EEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcc--------------
Confidence            9999997432      2234567889999999999888644    233457999999766543332              


Q ss_pred             cChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCcc---ccCCCCceeeeeH
Q 019878          139 CTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGY---IGYGNDRFSFCHV  211 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~v  211 (334)
                      ...|+.+|.+.+.+.+.+    .++|+++..+.||.+-.+.    ...+...............   ........-+...
T Consensus       148 ~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p  223 (255)
T d1gega_         148 LAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPM----WAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEP  223 (255)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH----HHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCH
T ss_pred             cccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChH----HhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCH
Confidence            266999999877766654    4679999999999985431    1111111111100000000   0000112236679


Q ss_pred             HHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          212 DDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       212 ~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +|+|+++..++...   -+|+++.+.|
T Consensus       224 eevA~~v~fL~S~~a~~itG~~i~vDG  250 (255)
T d1gega_         224 EDVAACVSYLASPDSDYMTGQSLLIDG  250 (255)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             HHHHHHHHHHhCchhCCccCcEEEecC
Confidence            99999999988643   2689999864

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.82  E-value=1.3e-19  Score=151.38  Aligned_cols=210  Identities=12%  Similarity=0.123  Sum_probs=144.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC--CC-CCCCeEEEEcCCCChhhHHHHhc-------CCCEEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG--LP-SEGALELVYGDVTDYRSLVDACF-------GCHVIFH   71 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih   71 (334)
                      ++|||||++.||.++++.|+++|++|++.+|++.+...  +. ...++.++.+|++|.+++.++++       ++|++||
T Consensus         7 valVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDilVn   86 (247)
T d2ew8a1           7 LAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVN   86 (247)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            58999999999999999999999999999997643110  00 11368899999999998877753       5899999


Q ss_pred             eccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC---CCcEEEEecccceeccCCCccCCCCCccccccccChH
Q 019878           72 TAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (334)
Q Consensus        72 ~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y  142 (334)
                      +||....      ..++++..+++|+.++..+.+++.+..   +-.++|++||.....+.+.              ...|
T Consensus        87 nAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~--------------~~~Y  152 (247)
T d2ew8a1          87 NAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEA--------------YTHY  152 (247)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSS--------------CHHH
T ss_pred             CCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcc--------------cccc
Confidence            9997432      224567789999999999999876541   3468999999866533222              2669


Q ss_pred             HHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHH
Q 019878          143 ERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGH  218 (334)
Q Consensus       143 ~~sK~~~E~~~~~----~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  218 (334)
                      +.+|.+.+.+.+.    +.++|+++..+.||.+-.+.....  ...... .......       ....-+...+|+|+++
T Consensus       153 ~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~--~~~~~~-~~~~~~~-------~~l~r~~~pedvA~~v  222 (247)
T d2ew8a1         153 ISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEAS--ALSAMF-DVLPNML-------QAIPRLQVPLDLTGAA  222 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC---------------------CTT-------SSSCSCCCTHHHHHHH
T ss_pred             hhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCcccccc--ccchhH-HHHHHHh-------ccCCCCCCHHHHHHHH
Confidence            9999977766655    446799999999999976532110  000111 1111110       1112356789999999


Q ss_pred             HHHhhcC---CCCCeEEecC
Q 019878          219 IAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       219 ~~~~~~~---~~g~~~~i~g  235 (334)
                      +.++...   -+|+++.+.|
T Consensus       223 ~fL~S~~s~~itG~~i~vDG  242 (247)
T d2ew8a1         223 AFLASDDASFITGQTLAVDG  242 (247)
T ss_dssp             HHHTSGGGTTCCSCEEEESS
T ss_pred             HHHhCchhcCCcCCeEEECC
Confidence            9998643   3699999864

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.81  E-value=5.5e-20  Score=153.87  Aligned_cols=208  Identities=16%  Similarity=0.106  Sum_probs=149.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC----C--CCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S--EGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||++.||.++++.|+++|++|++.+|+.++.....    +  ..++.++.+|++|.+++.++++       ++|+
T Consensus         7 ~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   86 (251)
T d1vl8a_           7 VALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDT   86 (251)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5999999999999999999999999999999865432111    0  1267889999999988877763       4899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC---CCcEEEEeccccee-ccCCCccCCCCCccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFAL-GSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~Ss~~v~-~~~~~~~~~e~~~~~~~~~  138 (334)
                      +||+||....      ..++++..+++|+.++..+.+++.++.   +-.++|++||.... .+...              
T Consensus        87 LVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~--------------  152 (251)
T d1vl8a_          87 VVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPN--------------  152 (251)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSS--------------
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCcc--------------
Confidence            9999997322      223456788999999999999887652   33589999986432 22211              


Q ss_pred             cChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCchhHH--HHHHHHHHcCCCCccccCCCCceeeeeHH
Q 019878          139 CTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLV--AKLMIERFNGRLPGYIGYGNDRFSFCHVD  212 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  212 (334)
                      ...|+.+|.+.+.+.+.+    .++|+++..+.||.+-.+...   ...  ........+..+.         .-+..++
T Consensus       153 ~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~---~~~~~~~~~~~~~~~~pl---------~R~~~pe  220 (251)
T d1vl8a_         153 ISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTE---AVFSDPEKLDYMLKRIPL---------GRTGVPE  220 (251)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTH---HHHTCHHHHHHHHHTCTT---------SSCBCGG
T ss_pred             ccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHH---hccCCHHHHHHHHhcCCC---------CCCCCHH
Confidence            256999999887776654    467999999999999766421   111  1222222222222         1245689


Q ss_pred             HHHHHHHHHhhcC---CCCCeEEecC
Q 019878          213 DVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       213 D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      |+|+++..++...   -+|+++.+.|
T Consensus       221 dvA~~v~fL~S~~a~~itG~~i~vDG  246 (251)
T d1vl8a_         221 DLKGVAVFLASEEAKYVTGQIIFVDG  246 (251)
T ss_dssp             GGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHhCchhCCCcCcEEEeCc
Confidence            9999999988643   3699999864

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=8.1e-20  Score=152.56  Aligned_cols=211  Identities=15%  Similarity=0.138  Sum_probs=148.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-CCCCeEEEEcCCCChhhHHHHhc-------CCCEEEEec
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-SEGALELVYGDVTDYRSLVDACF-------GCHVIFHTA   73 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~a   73 (334)
                      ++|||||++.||.++++.|+++|++|++.+|+++..+.+. +.+++.++.+|++|.+++.++++       ++|++||+|
T Consensus         8 ~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnnA   87 (250)
T d1ydea1           8 VVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNA   87 (250)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEEecc
Confidence            5999999999999999999999999999999875433221 11368999999999998877764       489999999


Q ss_pred             cccCC-------CCCCcccchhhhhHHHHHHHHHHHhcC--CCcEEEEecccceeccCCCccCCCCCccccccccChHHH
Q 019878           74 ALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (334)
Q Consensus        74 ~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (334)
                      |....       ..++++..+++|+.++..+.+++.+..  +-.++|++||.......+.              ...|+.
T Consensus        88 G~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~~--------------~~~Y~a  153 (250)
T d1ydea1          88 GHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQ--------------AVPYVA  153 (250)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTT--------------CHHHHH
T ss_pred             cccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccccccC--------------cchhHH
Confidence            96321       122356788999999999998886551  1248999999876543322              267999


Q ss_pred             HHHHHHHHHHH----HhhcCCCEEEEecCceecCCCCC---chhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHH
Q 019878          145 SKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLT---TGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDG  217 (334)
Q Consensus       145 sK~~~E~~~~~----~~~~g~~~~ilR~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  217 (334)
                      +|.+.+.+.+.    +.++|+++..+.||.|-.+....   ...-....+.+.....+.         .-+...+|+|++
T Consensus       154 sKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R~g~p~eva~~  224 (250)
T d1ydea1         154 TKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPL---------GRMGQPAEVGAA  224 (250)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTT---------SSCBCHHHHHHH
T ss_pred             HHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCC---------CCCCCHHHHHHH
Confidence            99987776665    44679999999999985431000   000001122222222221         236679999999


Q ss_pred             HHHHhhcC--CCCCeEEecC
Q 019878          218 HIAAMEKG--RSGERYLLTG  235 (334)
Q Consensus       218 ~~~~~~~~--~~g~~~~i~g  235 (334)
                      ++.++...  -+|+++.+.|
T Consensus       225 v~fL~Sda~~itG~~i~vDG  244 (250)
T d1ydea1         225 AVFLASEANFCTGIELLVTG  244 (250)
T ss_dssp             HHHHHHHCTTCCSCEEEEST
T ss_pred             HHHHhCccCCCcCCeEEECC
Confidence            99887532  2688898854

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.81  E-value=1.6e-19  Score=152.78  Aligned_cols=213  Identities=16%  Similarity=0.184  Sum_probs=149.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC----CCCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS----GLPSEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vi   70 (334)
                      ++|||||++.||.++++.|+++|++|++++|+.++.+    .+.....+.++.+|++|.+++.++++       ++|++|
T Consensus         8 valITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lV   87 (268)
T d2bgka1           8 VAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMF   87 (268)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCcceec
Confidence            5999999999999999999999999999999865432    12233468899999999998887764       489999


Q ss_pred             EeccccCCC--------CCCcccchhhhhHHHHHHHHHHHhcC---CCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           71 HTAALVEPW--------LPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        71 h~a~~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      |+||.....        .++++..+++|+.++..+.+++.++.   +-.++|++||...+......             .
T Consensus        88 nnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~-------------~  154 (268)
T d2bgka1          88 GNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGV-------------S  154 (268)
T ss_dssp             ECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTS-------------C
T ss_pred             cccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccccccc-------------c
Confidence            999963221        12345678999999999998886542   34589999987655322211             1


Q ss_pred             ChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHH-cCCCCccccCCCCceeeeeHHHH
Q 019878          140 TQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERF-NGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~----~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      ..|+.+|.+.+.+.+.    +.++|+++..+.||.+-.+........-........ ....+        ..-+...+|+
T Consensus       155 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~--------~gr~~~pedv  226 (268)
T d2bgka1         155 HVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANL--------KGTLLRAEDV  226 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSS--------CSCCCCHHHH
T ss_pred             cccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhcccc--------CCCCcCHHHH
Confidence            3699999988777665    446799999999999987743211110011111111 11111        1125679999


Q ss_pred             HHHHHHHhhcC---CCCCeEEecC
Q 019878          215 VDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       215 a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      |+++..++...   -+|+++.+.|
T Consensus       227 A~~v~fL~S~~s~~itGq~i~VDG  250 (268)
T d2bgka1         227 ADAVAYLAGDESKYVSGLNLVIDG  250 (268)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHhChhhCCccCceEEECc
Confidence            99999998643   3699999964

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=6.1e-21  Score=160.27  Aligned_cols=214  Identities=18%  Similarity=0.162  Sum_probs=148.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----C---CCCCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----L---PSEGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~---~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      ++|||||++.||.++++.|+++|++|++++|+.++...    +   ....++.++.+|++|.+++.++++       ++|
T Consensus         5 valITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   84 (254)
T d2gdza1           5 VALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLD   84 (254)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcCCcC
Confidence            58999999999999999999999999999998643211    1   111368899999999998877764       489


Q ss_pred             EEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcC------CCcEEEEecccceeccCCCccCCCCCccccccccCh
Q 019878           68 VIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK------TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (334)
Q Consensus        68 ~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~------~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  141 (334)
                      ++||+||....  .+++..+++|+.++.++..++.++.      ...++|++||...+.+.+.              ...
T Consensus        85 ilVnnAg~~~~--~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~--------------~~~  148 (254)
T d2gdza1          85 ILVNNAGVNNE--KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQ--------------QPV  148 (254)
T ss_dssp             EEEECCCCCCS--SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT--------------CHH
T ss_pred             eeccccccccc--ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCC--------------ccc
Confidence            99999998544  5678899999999888888876542      1246999999876543322              256


Q ss_pred             HHHHHHHHHHHHH------HHhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCcc---ccCCCCceeeeeHH
Q 019878          142 YERSKAVADKIAL------QAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGY---IGYGNDRFSFCHVD  212 (334)
Q Consensus       142 Y~~sK~~~E~~~~------~~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~v~  212 (334)
                      |+.+|.+.+.+.+      ++.++|+++..+.||.+-.+.       +..+......+.....   ....-....+...+
T Consensus       149 Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~-------~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe  221 (254)
T d2gdza1         149 YCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAI-------LESIEKEENMGQYIEYKDHIKDMIKYYGILDPP  221 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHH-------HHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChh-------hhhccccccccccHHHHHHHHhcCCCCCCcCHH
Confidence            9999998877654      345679999999999885431       0000000000000000   00000011245689


Q ss_pred             HHHHHHHHHhhcCC-CCCeEEec-CCCC
Q 019878          213 DVVDGHIAAMEKGR-SGERYLLT-GENA  238 (334)
Q Consensus       213 D~a~a~~~~~~~~~-~g~~~~i~-g~~~  238 (334)
                      |+|++++.++.... +|++..+. |..+
T Consensus       222 dvA~~v~fL~s~~~itG~~i~VdGG~~~  249 (254)
T d2gdza1         222 LIANGLITLIEDDALNGAIMKITTSKGI  249 (254)
T ss_dssp             HHHHHHHHHHHCTTCSSCEEEEETTTEE
T ss_pred             HHHHHHHHHHcCCCCCCCEEEECCCCee
Confidence            99999999998654 69999995 5544

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.81  E-value=4.6e-20  Score=154.96  Aligned_cols=219  Identities=20%  Similarity=0.173  Sum_probs=149.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      ++|||||++.||.++++.|+++|++|++.+|+.+....+..  ..++.++.+|++|.+++.++++       .+|++||+
T Consensus         7 ~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilVnn   86 (256)
T d1k2wa_           7 TALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDILVNN   86 (256)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEee
Confidence            48999999999999999999999999999998654322111  1368899999999998887764       48999999


Q ss_pred             ccccCC------CCCCcccchhhhhHHHHHHHHHHHhc----CCCcEEEEecccceeccCCCccCCCCCccccccccChH
Q 019878           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQY  142 (334)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y  142 (334)
                      ||....      ..++++..+++|+.++..+.+++...    +.-.++|++||.....+.+.              ...|
T Consensus        87 Ag~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~--------------~~~Y  152 (256)
T d1k2wa_          87 AALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEAL--------------VGVY  152 (256)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT--------------CHHH
T ss_pred             cccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcccccc--------------ccch
Confidence            997432      22345678999999999998875442    23468999999876543322              2669


Q ss_pred             HHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCcc---ccCCCCceeeeeHHHHH
Q 019878          143 ERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGY---IGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       143 ~~sK~~~E~~~~~----~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~v~D~a  215 (334)
                      +.+|.+.+.+.+.    +.++|+++..+.||.+-.+..   ...... ............   ........-+...+|+|
T Consensus       153 ~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA  228 (256)
T d1k2wa_         153 CATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHW---DGVDAK-FADYENLPRGEKKRQVGAAVPFGRMGRAEDLT  228 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTH---HHHHHH-HHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHH
T ss_pred             hhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhh---hhhhhh-hhhhccCChHHHHHHHHhcCCCCCCcCHHHHH
Confidence            9999988777665    446799999999998876631   111111 100000000000   00000112356799999


Q ss_pred             HHHHHHhhcC---CCCCeEEec-CCCC
Q 019878          216 DGHIAAMEKG---RSGERYLLT-GENA  238 (334)
Q Consensus       216 ~a~~~~~~~~---~~g~~~~i~-g~~~  238 (334)
                      +++..++...   -+|+++.+. |..+
T Consensus       229 ~~v~fL~S~~a~~iTG~~i~vDGG~~m  255 (256)
T d1k2wa_         229 GMAIFLATPEADYIVAQTYNVDGGNWM  255 (256)
T ss_dssp             HHHHHTTSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHHHHhCchhCCccCceEEECcchhh
Confidence            9999988543   369999996 4444

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.81  E-value=1.8e-20  Score=157.93  Aligned_cols=217  Identities=13%  Similarity=0.118  Sum_probs=145.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC-CCCCC----C--CCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISGLP----S--EGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~----~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      ++|||||++.||.++++.|+++|++|++.+|+... .+.+.    .  ..++.++.+|++|.+++.++++       ++|
T Consensus         6 ~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   85 (260)
T d1x1ta1           6 VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRID   85 (260)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhCCCc
Confidence            58999999999999999999999999999997532 11110    0  1268899999999998887764       489


Q ss_pred             EEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        68 ~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      ++||+||....      ..+++...+++|+.++..+.+++.++   ++-.++|++||.......+.              
T Consensus        86 iLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~--------------  151 (260)
T d1x1ta1          86 ILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASAN--------------  151 (260)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT--------------
T ss_pred             EEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCC--------------
Confidence            99999997432      22345678899999999888877554   13459999999876543322              


Q ss_pred             cChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHH-c--CCCCccccCCCCceeeeeH
Q 019878          139 CTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERF-N--GRLPGYIGYGNDRFSFCHV  211 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~i~v  211 (334)
                      ...|+.+|...+.+.+.+    .++|+++..+.||.+-.+....   .+........ .  ..............-+...
T Consensus       152 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~p  228 (260)
T d1x1ta1         152 KSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEK---QISALAEKNGVDQETAARELLSEKQPSLQFVTP  228 (260)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC---------------------------CHHHHCTTCCCBCH
T ss_pred             cchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhh---hhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCH
Confidence            266999999887776654    4568999999999987653211   0000000000 0  0000000000112236779


Q ss_pred             HHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          212 DDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       212 ~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +|+|+++..++...   -+|+++.+.|
T Consensus       229 ediA~~v~fL~S~~a~~itG~~i~vDG  255 (260)
T d1x1ta1         229 EQLGGTAVFLASDAAAQITGTTVSVDG  255 (260)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHhChhhCCCcCCEEEECc
Confidence            99999999988643   3688999864

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.81  E-value=5.9e-20  Score=154.65  Aligned_cols=211  Identities=16%  Similarity=0.160  Sum_probs=148.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CC-CCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||++.||.++++.|+++|++|++++|+++..+.+    .. ..++.++.+|++|.+++.++++       .+|++
T Consensus         7 ~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   86 (260)
T d1zema1           7 VCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFL   86 (260)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCee
Confidence            589999999999999999999999999999986543211    11 1368899999999988877764       48999


Q ss_pred             EEeccccCC-------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           70 FHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        70 ih~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      ||+||....       ..+++...+++|+.++..+.+++.++   ++-.++|++||...+.+.+.              .
T Consensus        87 VnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~--------------~  152 (260)
T d1zema1          87 FNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPN--------------M  152 (260)
T ss_dssp             EECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTT--------------B
T ss_pred             hhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcc--------------h
Confidence            999996422       22345678899999999999887654   23468999999876543322              2


Q ss_pred             ChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCC-------------CchhHHHHHHHHHHcCCCCccccCC
Q 019878          140 TQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKL-------------TTGNLVAKLMIERFNGRLPGYIGYG  202 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~  202 (334)
                      ..|+.+|.+.+.+.+.+    .++|+++..+.||.|-.+...             .................+.      
T Consensus       153 ~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl------  226 (260)
T d1zema1         153 AAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPM------  226 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTT------
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCC------
Confidence            56999999887766654    467999999999999654210             0000001111111112111      


Q ss_pred             CCceeeeeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          203 NDRFSFCHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       203 ~~~~~~i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                         .-+...+|+|+++..++...   -+|+++.+.|
T Consensus       227 ---~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDG  259 (260)
T d1zema1         227 ---RRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAG  259 (260)
T ss_dssp             ---SSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESC
T ss_pred             ---CCCcCHHHHHHHHHHHhCchhcCccCCeEEeCC
Confidence               12566899999999998643   3688888854

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.80  E-value=6.7e-20  Score=153.99  Aligned_cols=211  Identities=12%  Similarity=0.133  Sum_probs=148.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC-------CCCCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-------PSEGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      ++|||||++.||.++++.|+++|++|++.+|+.++.+..       ....++.++.+|++|.+++.++++       ++|
T Consensus         6 ~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iD   85 (258)
T d1iy8a_           6 VVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRID   85 (258)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhCCCC
Confidence            589999999999999999999999999999986543211       111268889999999998877763       489


Q ss_pred             EEEEeccccCC-------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccc
Q 019878           68 VIFHTAALVEP-------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        68 ~vih~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~  137 (334)
                      ++||+||....       ..++++..+++|+.++..+.+++...   ++-.++|++||.......+.             
T Consensus        86 iLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~-------------  152 (258)
T d1iy8a_          86 GFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGN-------------  152 (258)
T ss_dssp             EEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSS-------------
T ss_pred             EEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCC-------------
Confidence            99999996321       22345678999999999999887443   13458999999766543222             


Q ss_pred             ccChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCCCCc-----hhHHHHHHHHHHcCCCCccccCCCCceee
Q 019878          138 FCTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTT-----GNLVAKLMIERFNGRLPGYIGYGNDRFSF  208 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~----~~~~g~~~~ilR~~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (334)
                       ...|+.+|.+.+.+.+.    +.++|+++..+.||.+..+.....     ...............+         ..-+
T Consensus       153 -~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p---------l~R~  222 (258)
T d1iy8a_         153 -QSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNP---------SKRY  222 (258)
T ss_dssp             -BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCT---------TCSC
T ss_pred             -chHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCC---------CCCC
Confidence             36799999977766655    456799999999999965421000     0000111112222211         1235


Q ss_pred             eeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          209 CHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       209 i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      ...+|+|+++..++...   -+|+++.+.|
T Consensus       223 ~~p~dvA~~v~fL~S~~s~~itG~~i~VDG  252 (258)
T d1iy8a_         223 GEAPEIAAVVAFLLSDDASYVNATVVPIDG  252 (258)
T ss_dssp             BCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             cCHHHHHHHHHHHhCchhcCCcCceEEcCc
Confidence            67999999999998643   3688999954

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.80  E-value=7.2e-20  Score=153.97  Aligned_cols=211  Identities=15%  Similarity=0.106  Sum_probs=149.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEcCCCChhhHHHHhc--------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF--------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~--------~~d~   68 (334)
                      ++|||||++.||.++++.|+++|++|++.+|++++.+.+.     ...++.++.+|++|.+++.++++        .+|+
T Consensus        10 ~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~idi   89 (259)
T d2ae2a_          10 TALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNI   89 (259)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCCE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCCceE
Confidence            5899999999999999999999999999999865432211     11367889999999988776542        3899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      +||+||....      ..++++..+++|+.++..+.+++.+.   .+-.++|++||.......+.              .
T Consensus        90 lvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~--------------~  155 (259)
T d2ae2a_          90 LVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPY--------------E  155 (259)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTT--------------C
T ss_pred             EEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccccccc--------------c
Confidence            9999997432      22345678999999999988887554   23468999999765543322              2


Q ss_pred             ChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCC--chhHHHHHHHHHHcCCCCccccCCCCceeeeeHHH
Q 019878          140 TQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLT--TGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                      ..|+.+|...+.+.+.+    .++|+++..+.||.+-.+....  ........+.+.....+.         .-+...+|
T Consensus       156 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl---------~R~g~ped  226 (259)
T d2ae2a_         156 AVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCAL---------RRMGEPKE  226 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTT---------CSCBCHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCC---------CCCcCHHH
Confidence            67999999888777664    4568999999999986542100  000111222333332222         12556999


Q ss_pred             HHHHHHHHhhcC---CCCCeEEecC
Q 019878          214 VVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       214 ~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +|+++..++...   -+|+++.+.|
T Consensus       227 vA~~v~fL~S~~s~~itG~~i~VDG  251 (259)
T d2ae2a_         227 LAAMVAFLCFPAASYVTGQIIYVDG  251 (259)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHhCchhCCCcCcEEEECC
Confidence            999999988643   3689999864

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.80  E-value=7e-20  Score=153.31  Aligned_cols=209  Identities=14%  Similarity=0.135  Sum_probs=147.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC----CCCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS----GLPSEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vi   70 (334)
                      ++|||||++.||.++++.|+++|++|++.+|+.+..+    .+....++.++.+|++|.+++.++++       ++|++|
T Consensus         8 ~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLV   87 (251)
T d1zk4a1           8 VAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLV   87 (251)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCceEEE
Confidence            5899999999999999999999999999999865332    12223478999999999998877664       489999


Q ss_pred             EeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC---C-CcEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---T-VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        71 h~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~-~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      |+||....      ..+++...+++|+.++..+.+++....   + ..++|++||...+.+.+.              ..
T Consensus        88 nnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~--------------~~  153 (251)
T d1zk4a1          88 NNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPS--------------LG  153 (251)
T ss_dssp             ECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTT--------------CH
T ss_pred             eccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCC--------------ch
Confidence            99997432      223456688999999999999876542   2 247999999765533221              26


Q ss_pred             hHHHHHHHHHHHHHHH------hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          141 QYERSKAVADKIALQA------ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~------~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      .|+.+|...+.+.+.+      .++|+++..+.||.+-.+.......  ...... .....        ...-+...+|+
T Consensus       154 ~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~--~~~~~~-~~~~~--------pl~R~~~pedv  222 (251)
T d1zk4a1         154 AYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPG--AEEAMS-QRTKT--------PMGHIGEPNDI  222 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTT--HHHHHT-STTTC--------TTSSCBCHHHH
T ss_pred             hHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCC--HHHHHH-HHhCC--------CCCCCcCHHHH
Confidence            6999999887766543      2468999999999996542100000  011110 01111        11236679999


Q ss_pred             HHHHHHHhhcC---CCCCeEEecC
Q 019878          215 VDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       215 a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      |+++..++...   -+|+++.+.|
T Consensus       223 A~~v~fL~S~~s~~itG~~i~vDG  246 (251)
T d1zk4a1         223 AYICVYLASNESKFATGSEFVVDG  246 (251)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHhCchhCCCcCcEEEECc
Confidence            99999988643   3688999864

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.80  E-value=7.4e-20  Score=153.91  Aligned_cols=211  Identities=14%  Similarity=0.080  Sum_probs=149.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CC-CCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PS-EGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      .+|||||++.||.++++.|+++|++|++.+|+++..+.+    .. ..++.++.+|++|.+++.++++       ++|++
T Consensus         4 ValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDil   83 (257)
T d2rhca1           4 VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVL   83 (257)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCCEE
Confidence            369999999999999999999999999999986543211    11 1368999999999998877764       48999


Q ss_pred             EEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc-----CCCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET-----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        70 ih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      ||+||....      ..++++..+++|+.++..+.+++.++     .+..++|++||...+.+.+.              
T Consensus        84 VnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~--------------  149 (257)
T d2rhca1          84 VNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVH--------------  149 (257)
T ss_dssp             EECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTT--------------
T ss_pred             EecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccccccc--------------
Confidence            999997432      22346678999999999999998653     13358999998766544332              


Q ss_pred             cChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCc--------hhHHHHHHHHHHcCCCCccccCCCCce
Q 019878          139 CTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTT--------GNLVAKLMIERFNGRLPGYIGYGNDRF  206 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (334)
                      ...|+.+|...+.+.+.+.    ++|+++..+.||.+-.+.....        .......+.......+.         .
T Consensus       150 ~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~Pl---------g  220 (257)
T d2rhca1         150 AAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPI---------G  220 (257)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTT---------S
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCC---------C
Confidence            2669999998887777654    5689999999999854311000        00011122222222111         1


Q ss_pred             eeeeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          207 SFCHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       207 ~~i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      -+...+|+|+++..++...   -+|+++.+.|
T Consensus       221 R~~~pedia~~v~fL~S~~s~~itG~~i~vDG  252 (257)
T d2rhca1         221 RYVQPSEVAEMVAYLIGPGAAAVTAQALNVCG  252 (257)
T ss_dssp             SCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             CCcCHHHHHHHHHHHhCchhcCCcCceEEECc
Confidence            2667999999999998543   3689999864

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.80  E-value=2.7e-19  Score=149.91  Aligned_cols=206  Identities=17%  Similarity=0.157  Sum_probs=148.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC------CCCCCeEEEEcCCC-ChhhHHHHh-------cCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL------PSEGALELVYGDVT-DYRSLVDAC-------FGCH   67 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~~v~~~~~Dl~-d~~~~~~~~-------~~~d   67 (334)
                      +||||||++.||.++++.|+++|++|++++|+.++...+      ....++.++.+|++ +.+++.+++       .++|
T Consensus         7 ~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~iD   86 (254)
T d1sbya1           7 NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTVD   86 (254)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSCCC
T ss_pred             EEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcCCCC
Confidence            599999999999999999999999999999887653221      11136899999998 555555544       3589


Q ss_pred             EEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcC------CCcEEEEecccceeccCCCccCCCCCccccccccCh
Q 019878           68 VIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETK------TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQ  141 (334)
Q Consensus        68 ~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~------~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~  141 (334)
                      ++||+||....  +.++..+++|+.++.++.+++.+..      ...++|++||...+.+...              ...
T Consensus        87 ilvnnAG~~~~--~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~--------------~~~  150 (254)
T d1sbya1          87 ILINGAGILDD--HQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQ--------------VPV  150 (254)
T ss_dssp             EEEECCCCCCT--TCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT--------------SHH
T ss_pred             EEEeCCCCCCH--HHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCC--------------CHH
Confidence            99999997543  6788899999999999999887652      2357999999777644332              366


Q ss_pred             HHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCC--CchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          142 YERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKL--TTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       142 Y~~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      |+.+|++...+.+.+    .++|+++..+.||.|..+...  ....-....+....            ..+.....+++|
T Consensus       151 Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~e~va  218 (254)
T d1sbya1         151 YSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELL------------LSHPTQTSEQCG  218 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHH------------TTSCCEEHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhcc------------ccCCCCCHHHHH
Confidence            999999777666654    456999999999999764100  00000000111111            111244699999


Q ss_pred             HHHHHHhhcCCCCCeEEecC
Q 019878          216 DGHIAAMEKGRSGERYLLTG  235 (334)
Q Consensus       216 ~a~~~~~~~~~~g~~~~i~g  235 (334)
                      ++++.+++...+|.++.+.|
T Consensus       219 ~~~~~~~~~~~tG~vi~vdg  238 (254)
T d1sbya1         219 QNFVKAIEANKNGAIWKLDL  238 (254)
T ss_dssp             HHHHHHHHHCCTTCEEEEET
T ss_pred             HHHHHhhhCCCCCCEEEECC
Confidence            99999998877899999964

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.80  E-value=3.8e-20  Score=154.22  Aligned_cols=208  Identities=20%  Similarity=0.195  Sum_probs=146.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCC-CCCCCCC-----CCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS-DISGLPS-----EGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~-----~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      .||||||++.||.++++.|+++|++|++.+++.. ..+.+.+     ..++.++.+|++|.+++.++++       ++|+
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDV   82 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCc
Confidence            3799999999999999999999999998765432 2211110     1368889999999998877764       4899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC---CCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      +||+||....      ..++++..+++|+.++..+.+++.+..   +-.++|++||...+-+..+              .
T Consensus        83 LVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~--------------~  148 (244)
T d1edoa_          83 VVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIG--------------Q  148 (244)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT--------------C
T ss_pred             cccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCC--------------C
Confidence            9999997432      234566789999999999988886541   3469999999876543322              2


Q ss_pred             ChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          140 TQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      ..|+.+|.+.+.+.+.+    .++|+++..+.||.+-.+...   ........... ...|        ..-+...+|+|
T Consensus       149 ~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~---~~~~~~~~~~~-~~~p--------l~R~~~p~dvA  216 (244)
T d1edoa_         149 ANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTA---KLGEDMEKKIL-GTIP--------LGRTGQPENVA  216 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHH---TTCHHHHHHHH-TSCT--------TCSCBCHHHHH
T ss_pred             HHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHH---HhhHHHHHHHH-hcCC--------CCCCcCHHHHH
Confidence            66999999877766654    466999999999998654211   11112222222 2222        11256799999


Q ss_pred             HHHHHHhhcC----CCCCeEEecC
Q 019878          216 DGHIAAMEKG----RSGERYLLTG  235 (334)
Q Consensus       216 ~a~~~~~~~~----~~g~~~~i~g  235 (334)
                      +++..++.++    -+|+++.+.|
T Consensus       217 ~~v~fLa~S~~a~~itG~~i~vdG  240 (244)
T d1edoa_         217 GLVEFLALSPAASYITGQAFTIDG  240 (244)
T ss_dssp             HHHHHHHHCSGGGGCCSCEEEEST
T ss_pred             HHHHHHHCCchhcCCcCCeEEeCC
Confidence            9999886433    3688888854

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.80  E-value=7.4e-20  Score=153.79  Aligned_cols=209  Identities=16%  Similarity=0.135  Sum_probs=136.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEcCCCChhhHHHHhc--------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF--------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~--------~~d~   68 (334)
                      ++|||||++.||.++++.|+++|++|++++|++++.+...     ...++.++.+|++|.+++.++++        .+|+
T Consensus        10 ~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~idi   89 (259)
T d1xq1a_          10 TVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDI   89 (259)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCSE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCCccc
Confidence            5999999999999999999999999999999865432210     11368999999999988766552        3899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      +||+||....      ..++++..+++|+.++..+.+++.+.   ++-.++|++||.........              .
T Consensus        90 lvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~--------------~  155 (259)
T d1xq1a_          90 LINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASV--------------G  155 (259)
T ss_dssp             EEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC------------------------C
T ss_pred             ccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccccc--------------c
Confidence            9999997332      23356678899999999999887654   13469999999765543221              2


Q ss_pred             ChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          140 TQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~----~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      ..|+.+|.+.+.+.+.    +.++|+++..+-||.+-.+...   ........+......        ...-+...+|+|
T Consensus       156 ~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~---~~~~~~~~~~~~~~~--------pl~R~~~pedvA  224 (259)
T d1xq1a_         156 SIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAE---AVYDDEFKKVVISRK--------PLGRFGEPEEVS  224 (259)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC------------------------------------CCGGGGH
T ss_pred             ccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhh---hhchHHHHHHHHhCC--------CCCCCcCHHHHH
Confidence            6799999988776665    4467999999999999765321   111111111111111        112356799999


Q ss_pred             HHHHHHhhcC---CCCCeEEecC
Q 019878          216 DGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       216 ~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      .++..++...   -+|+++.+.|
T Consensus       225 ~~v~fL~S~~s~~iTG~~i~vDG  247 (259)
T d1xq1a_         225 SLVAFLCMPAASYITGQTICVDG  247 (259)
T ss_dssp             HHHHHHTSGGGTTCCSCEEECCC
T ss_pred             HHHHHHhCchhcCCcCcEEEeCC
Confidence            9999988542   3688888854

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.80  E-value=1.5e-19  Score=151.76  Aligned_cols=211  Identities=17%  Similarity=0.102  Sum_probs=147.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEcCCCChhhHHHHhc--------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF--------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~--------~~d~   68 (334)
                      ++|||||++.||.++++.|+++|++|++++|++++.+...     ....+.++.+|+++.+++.++++        .+|+
T Consensus         8 ~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~idi   87 (258)
T d1ae1a_           8 TALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNI   87 (258)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCCE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCCcEE
Confidence            6999999999999999999999999999999875432211     11357889999999998766652        2799


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      +||+||....      ..+++...+++|+.++..+.+++...   +...++|++||.....+.+.              .
T Consensus        88 linnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~--------------~  153 (258)
T d1ae1a_          88 LVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPS--------------V  153 (258)
T ss_dssp             EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTT--------------C
T ss_pred             EeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccccccc--------------c
Confidence            9999997432      23356678899999999988877543   24569999999877654332              2


Q ss_pred             ChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCchh---HHHHHHHHHHcCCCCccccCCCCceeeeeHH
Q 019878          140 TQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGN---LVAKLMIERFNGRLPGYIGYGNDRFSFCHVD  212 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  212 (334)
                      ..|+.+|.+.+.+.+.+    .++|+++..+.||.+..+.......   .....+.......+.         .-+...+
T Consensus       154 ~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---------gR~~~pe  224 (258)
T d1ae1a_         154 SLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM---------GRAGKPQ  224 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT---------CSCBCHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCC---------CCCcCHH
Confidence            66999999888777665    4568999999999998764211100   011222222222111         1267899


Q ss_pred             HHHHHHHHHhhcC---CCCCeEEecC
Q 019878          213 DVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       213 D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      |+|.++..++...   -+|+.+.+.|
T Consensus       225 diA~~v~fL~S~~s~~itG~~i~vDG  250 (258)
T d1ae1a_         225 EVSALIAFLCFPAASYITGQIIWADG  250 (258)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHhChhhCCCcCcEEEeCC
Confidence            9999999999532   3688888854

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.80  E-value=5e-19  Score=148.77  Aligned_cols=210  Identities=18%  Similarity=0.173  Sum_probs=148.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC-CCC----CCC-CCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD-ISG----LPS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~----~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||++.||.++++.|+++|++|++.+|+.+. .+.    +.. ..++.++.+|++|.+++.++++       ++|+
T Consensus         9 ~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDi   88 (261)
T d1geea_           9 VVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDV   88 (261)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            59999999999999999999999999999998642 111    111 1268889999999998877764       4899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc----CCCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      +||+||....      ..+++...+++|+.++..+.+++.++    +...++|++||.......+.              
T Consensus        89 LVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~--------------  154 (261)
T d1geea_          89 MINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPL--------------  154 (261)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTT--------------
T ss_pred             eeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCcc--------------
Confidence            9999997432      22345678999999999988877554    22346889999765533222              


Q ss_pred             cChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          139 CTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      ...|+.+|.+.+.+.+.+    .++|+++..+.||.+..+...  ......-.........|        ..-+...+|+
T Consensus       155 ~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~--~~~~~~~~~~~~~~~~p--------l~R~~~pedi  224 (261)
T d1geea_         155 FVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINA--EKFADPEQRADVESMIP--------MGYIGEPEEI  224 (261)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGH--HHHHSHHHHHHHHTTCT--------TSSCBCHHHH
T ss_pred             ccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHh--hhcCCHHHHHHHHhcCC--------CCCCCCHHHH
Confidence            266999999887766654    467999999999999765311  01111112222222222        1125679999


Q ss_pred             HHHHHHHhhcC---CCCCeEEecC
Q 019878          215 VDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       215 a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      |++++.++...   -+|+++.+.|
T Consensus       225 A~~v~fL~S~~s~~itG~~i~vDG  248 (261)
T d1geea_         225 AAVAAWLASSEASYVTGITLFADG  248 (261)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHhCchhcCCcCCeEEECC
Confidence            99999988643   3699999964

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.79  E-value=7.3e-19  Score=145.60  Aligned_cols=205  Identities=14%  Similarity=0.140  Sum_probs=146.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCCh-hhHHHHhcCCCEEEEeccccCC--
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY-RSLVDACFGCHVIFHTAALVEP--   78 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~-~~~~~~~~~~d~vih~a~~~~~--   78 (334)
                      ++|||||++.||.++++.|+++|++|++.+|+++..+..    ..+++.+|+++. +.+.+.+.++|++||+||....  
T Consensus         6 ~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~----~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~~~~~   81 (234)
T d1o5ia_           6 GVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS----GHRYVVCDLRKDLDLLFEKVKEVDILVLNAGGPKAGF   81 (234)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT----CSEEEECCTTTCHHHHHHHSCCCSEEEECCCCCCCBC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc----CCcEEEcchHHHHHHHHHHhCCCcEEEecccccCCcc
Confidence            699999999999999999999999999999987544332    457889999864 4455666779999999997322  


Q ss_pred             ----CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHH
Q 019878           79 ----WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADK  151 (334)
Q Consensus        79 ----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~  151 (334)
                          ..++++..+++|+.++..+.+++.+.   ++-.++|++||.........              ...|+.+|.+.+.
T Consensus        82 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~--------------~~~Y~asKaal~~  147 (234)
T d1o5ia_          82 FDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIEN--------------LYTSNSARMALTG  147 (234)
T ss_dssp             GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT--------------BHHHHHHHHHHHH
T ss_pred             hhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccc--------------cccchhHHHHHHH
Confidence                22345667899999988888877543   13458999999765543332              2569999998776


Q ss_pred             HHHH----HhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcC--
Q 019878          152 IALQ----AASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG--  225 (334)
Q Consensus       152 ~~~~----~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~--  225 (334)
                      +.+.    +.++|+++..+.||.+-.+..   ...+.....+......|        ...+...+|+|+++..++...  
T Consensus       148 ltk~lA~ela~~gIrVN~I~PG~v~T~~~---~~~~~~~~~~~~~~~~p--------l~R~~~pediA~~v~fL~S~~s~  216 (234)
T d1o5ia_         148 FLKTLSFEVAPYGITVNCVAPGWTETERV---KELLSEEKKKQVESQIP--------MRRMAKPEEIASVVAFLCSEKAS  216 (234)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCTTH---HHHSCHHHHHHHHTTST--------TSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHhcccCeEEeecccCccchhhh---hhhcCHHHHHHHHhcCC--------CCCCcCHHHHHHHHHHHhChhhc
Confidence            6655    456799999999999876532   11112222222222222        123667999999999988543  


Q ss_pred             -CCCCeEEecC
Q 019878          226 -RSGERYLLTG  235 (334)
Q Consensus       226 -~~g~~~~i~g  235 (334)
                       -+|+++.+.|
T Consensus       217 ~itG~~i~vDG  227 (234)
T d1o5ia_         217 YLTGQTIVVDG  227 (234)
T ss_dssp             TCCSCEEEEST
T ss_pred             CCcCcEEEECc
Confidence             3699999964

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.78  E-value=8.7e-20  Score=152.82  Aligned_cols=208  Identities=19%  Similarity=0.141  Sum_probs=146.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC--CCCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS--EGALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      ++|||||++.||.++++.|+++|++|++.+|+++..+.+.+  ..+..++.+|++|.+++.++++       .+|++||+
T Consensus         8 ~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDilVnn   87 (253)
T d1hxha_           8 VALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNN   87 (253)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEEC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeEEec
Confidence            59999999999999999999999999999998654322111  1267889999999988777664       48999999


Q ss_pred             ccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC--CCcEEEEecccceeccCCCccCCCCCccccccccChHHH
Q 019878           73 AALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (334)
Q Consensus        73 a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (334)
                      ||....      ..++++..+++|+.++..+++++.++.  .-.++|++||.....+.+.              ...|+.
T Consensus        88 AG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~~--------------~~~Y~a  153 (253)
T d1hxha_          88 AGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQ--------------YAGYSA  153 (253)
T ss_dssp             CCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTT--------------BHHHHH
T ss_pred             ccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCccc--------------cccccc
Confidence            997432      223456788999999999888886652  2258999999766533221              267999


Q ss_pred             HHHHHHHHHHHH----hhc--CCCEEEEecCceecCCCCCchhHHHHHH-----HHHHcCCCCccccCCCCceeeeeHHH
Q 019878          145 SKAVADKIALQA----ASE--GLPIVPVYPGVIYGPGKLTTGNLVAKLM-----IERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       145 sK~~~E~~~~~~----~~~--g~~~~ilR~~~v~G~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                      +|.+.+.+.+.+    .++  ++++..+-||.+..+.       ....+     ........+.     .....+...+|
T Consensus       154 sKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~-------~~~~~~~~~~~~~~~~~~~~-----~~~gr~~~ped  221 (253)
T d1hxha_         154 SKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPM-------MQASLPKGVSKEMVLHDPKL-----NRAGRAYMPER  221 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHH-------HHHHSCTTCCHHHHBCBTTT-----BTTCCEECHHH
T ss_pred             hhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHh-------HHhhCcchhhHHHHHhCccc-----cccCCCCCHHH
Confidence            999887766653    343  5899999999986531       10000     1111111111     11224778999


Q ss_pred             HHHHHHHHhhcC---CCCCeEEecC
Q 019878          214 VVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       214 ~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +|+++..++...   -+|+++++.|
T Consensus       222 vA~~v~fL~S~~s~~itG~~i~VDG  246 (253)
T d1hxha_         222 IAQLVLFLASDESSVMSGSELHADN  246 (253)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred             HHHHHHHHhChhhCCCcCcEEEECc
Confidence            999999988643   3699999964

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.78  E-value=3e-19  Score=148.29  Aligned_cols=189  Identities=15%  Similarity=0.145  Sum_probs=139.6

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCe-------EEEEEcCCCCCCCC----C-CCCCeEEEEcCCCChhhHHHHhc------
Q 019878            3 ILVSGASGYLGGRLCHALLKQGHS-------VRALVRRTSDISGL----P-SEGALELVYGDVTDYRSLVDACF------   64 (334)
Q Consensus         3 ilItG~tG~iG~~l~~~L~~~g~~-------V~~~~r~~~~~~~~----~-~~~~v~~~~~Dl~d~~~~~~~~~------   64 (334)
                      ||||||++.||.++++.|+++|++       |++.+|+.+..+.+    . ...++.++.+|++|.+++.++++      
T Consensus         4 vlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (240)
T d2bd0a1           4 LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVERY   83 (240)
T ss_dssp             EEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             EEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            799999999999999999999987       88888886543221    1 11367889999999998877664      


Q ss_pred             -CCCEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC---CCcEEEEecccceeccCCCccCCCCCccc
Q 019878           65 -GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHE  134 (334)
Q Consensus        65 -~~d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~  134 (334)
                       .+|++||+||....      ..++++..+++|+.++..+.+++.++.   +-.++|++||...+.+.+.          
T Consensus        84 g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~----------  153 (240)
T d2bd0a1          84 GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRH----------  153 (240)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----------
T ss_pred             CCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCC----------
Confidence             48999999997432      223566789999999999988886652   3458999999876544332          


Q ss_pred             cccccChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeee
Q 019878          135 EKYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCH  210 (334)
Q Consensus       135 ~~~~~~~Y~~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  210 (334)
                          ...|+.+|.+.+.+.+.+    .++|+++..+.||.+-.+.....            .         .+....+..
T Consensus       154 ----~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~------------~---------~~~~~~~~~  208 (240)
T d2bd0a1         154 ----SSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV------------D---------DEMQALMMM  208 (240)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC------------C---------STTGGGSBC
T ss_pred             ----ChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhc------------C---------HhhHhcCCC
Confidence                267999999777666654    45689999999999976532110            0         011123556


Q ss_pred             HHHHHHHHHHHhhcCC
Q 019878          211 VDDVVDGHIAAMEKGR  226 (334)
Q Consensus       211 v~D~a~a~~~~~~~~~  226 (334)
                      .+|+|+++..++..+.
T Consensus       209 PedvA~~v~~l~s~~~  224 (240)
T d2bd0a1         209 PEDIAAPVVQAYLQPS  224 (240)
T ss_dssp             HHHHHHHHHHHHTSCT
T ss_pred             HHHHHHHHHHHHcCCc
Confidence            8999999999998754

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.77  E-value=8.2e-19  Score=147.70  Aligned_cols=215  Identities=18%  Similarity=0.198  Sum_probs=148.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC------CCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS------EGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||++.||.++++.|+++|++|++++|+.++..+..+      ..++.++.+|++|.+++.++++       .+|+
T Consensus        11 ~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   90 (260)
T d1h5qa_          11 TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISG   90 (260)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCCCcE
Confidence            59999999999999999999999999999999875432110      1368899999999998877764       4899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc----CCCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET----KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      +||+||....      ..++++..+++|+.++..+.+++.++    ....+++..||...........       .+.+.
T Consensus        91 lVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~-------~~~~~  163 (260)
T d1h5qa_          91 LIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL-------NGSLT  163 (260)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEET-------TEECS
T ss_pred             ecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccccc-------ccCcc
Confidence            9999997322      22345678899999999888876543    2344677777655443221100       00111


Q ss_pred             cChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          139 CTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~----~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      ...|+.+|.+.+.+.+.    +.++|+++..+.||.+-.+....   .............+.         .-+...+|+
T Consensus       164 ~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~---~~~~~~~~~~~~~pl---------~R~g~pedv  231 (260)
T d1h5qa_         164 QVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAH---MDKKIRDHQASNIPL---------NRFAQPEEM  231 (260)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG---SCHHHHHHHHHTCTT---------SSCBCGGGG
T ss_pred             ccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhc---cCHHHHHHHHhcCCC---------CCCcCHHHH
Confidence            36799999988776665    44679999999999997653211   112222222222221         125569999


Q ss_pred             HHHHHHHhhcC---CCCCeEEecC
Q 019878          215 VDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       215 a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      |+++..++...   -+|+++.+.|
T Consensus       232 A~~v~fL~S~~s~~itG~~i~VDG  255 (260)
T d1h5qa_         232 TGQAILLLSDHATYMTGGEYFIDG  255 (260)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEECT
T ss_pred             HHHHHHHhcchhCCCcCceEEECC
Confidence            99999988543   3689999864

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.77  E-value=2.6e-19  Score=149.98  Aligned_cols=210  Identities=12%  Similarity=0.051  Sum_probs=145.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-------GCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~a~   74 (334)
                      ++|||||++.||..+++.|+++|++|++.+|+.+..+++... ...+..+|+.|.+++.++++       ++|++||+||
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~-~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg   80 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAF-AETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDI   80 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHH-HHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhh-hCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence            689999999999999999999999999999987654433211 22345678887766655543       5899999998


Q ss_pred             ccCC-------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccChHHH
Q 019878           75 LVEP-------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (334)
Q Consensus        75 ~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (334)
                      ....       ..+++...+++|+.++..+.+++.++   ++-.++|++||...+...+.              ...|+.
T Consensus        81 ~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~--------------~~~Y~a  146 (252)
T d1zmta1          81 FAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKE--------------LSTYTS  146 (252)
T ss_dssp             CCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTT--------------CHHHHH
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccccccc--------------cccccc
Confidence            6321       11235567889999999888877544   13458999999876554332              256999


Q ss_pred             HHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCch-h----HHHHHHHHHHcCCCCccccCCCCceeeeeHHHHH
Q 019878          145 SKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTG-N----LVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVV  215 (334)
Q Consensus       145 sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  215 (334)
                      +|...+.+.+.+    .++|+++..+.||.+-.+...... .    ..........+..+.         .-+...+|+|
T Consensus       147 sKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl---------~R~g~pedvA  217 (252)
T d1zmta1         147 ARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTAL---------QRLGTQKELG  217 (252)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSS---------SSCBCHHHHH
T ss_pred             ccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCC---------CCCcCHHHHH
Confidence            999877766654    467999999999999766432110 0    011222222222111         1256799999


Q ss_pred             HHHHHHhhcCC---CCCeEEecC
Q 019878          216 DGHIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       216 ~a~~~~~~~~~---~g~~~~i~g  235 (334)
                      +++..++....   +|+++.+.|
T Consensus       218 ~~v~fL~S~~s~~iTG~~i~vdG  240 (252)
T d1zmta1         218 ELVAFLASGSCDYLTGQVFWLAG  240 (252)
T ss_dssp             HHHHHHHTTSCGGGTTCEEEEST
T ss_pred             HHHHHHhCchhcCCcCCeEEECC
Confidence            99999986543   699999964

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.77  E-value=3.9e-19  Score=147.82  Aligned_cols=205  Identities=20%  Similarity=0.221  Sum_probs=147.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC----CCCCCCCeEEEEcCCCChhhHHHHhc-------CCCEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS----GLPSEGALELVYGDVTDYRSLVDACF-------GCHVIF   70 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~vi   70 (334)
                      ++|||||++.||.++++.|+++|++|++.+|+.++..    ++.  .++.++++|+++.+++.++++       ++|++|
T Consensus         7 ~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiLi   84 (241)
T d2a4ka1           7 TILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE--AEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVA   84 (241)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC--SSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC--CceEEEEecCCCHHHHHHHHHHHHHHhCCccEec
Confidence            6999999999999999999999999999999876432    222  368899999999998877664       489999


Q ss_pred             EeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcCCCcE-EEEecccceeccCCCccCCCCCccccccccChHH
Q 019878           71 HTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKTVEK-IIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (334)
Q Consensus        71 h~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (334)
                      |+|+....      ..+++...+++|+.++..+.+++.....-.. ++.+||.+....+               ....|+
T Consensus        85 nnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~~---------------~~~~Y~  149 (241)
T d2a4ka1          85 HFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAF---------------GLAHYA  149 (241)
T ss_dssp             EGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHH---------------HHHHHH
T ss_pred             cccccccccchhhhhccccccccccccccccccccccccccccccceeecccccccccc---------------Cccccc
Confidence            99987422      2224566889999999999999887744333 4444443322111               136699


Q ss_pred             HHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHH
Q 019878          144 RSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHI  219 (334)
Q Consensus       144 ~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  219 (334)
                      .+|.+.|.+.+.++    ++|+++..+.||.+-.+...   +.......+.....+.         .-+...+|+|+++.
T Consensus       150 ~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~---~~~~~~~~~~~~~~p~---------~r~~~p~dva~~v~  217 (241)
T d2a4ka1         150 AGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTA---GLPPWAWEQEVGASPL---------GRAGRPEEVAQAAL  217 (241)
T ss_dssp             HCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGT---TSCHHHHHHHHHTSTT---------CSCBCHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHH---hhhHhHHHHHHhCCCC---------CCCcCHHHHHHHHH
Confidence            99999888887754    56899999999999654321   1122233333333222         12567999999999


Q ss_pred             HHhhcC---CCCCeEEecC
Q 019878          220 AAMEKG---RSGERYLLTG  235 (334)
Q Consensus       220 ~~~~~~---~~g~~~~i~g  235 (334)
                      .++...   -+|+++.+.|
T Consensus       218 fL~S~~s~~itG~~i~vDG  236 (241)
T d2a4ka1         218 FLLSEESAYITGQALYVDG  236 (241)
T ss_dssp             HHHSGGGTTCCSCEEEEST
T ss_pred             HHhcchhCCCcCceEEeCC
Confidence            999643   3688888854

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.77  E-value=7.5e-19  Score=148.97  Aligned_cols=215  Identities=15%  Similarity=0.148  Sum_probs=146.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC--------CCCCeEEEEcCCCChhhHHHHhc-------CC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP--------SEGALELVYGDVTDYRSLVDACF-------GC   66 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~v~~~~~Dl~d~~~~~~~~~-------~~   66 (334)
                      ++|||||++.||.++++.|+++|++|++.+|+.++.+.+.        ...++.++.+|++|.+++.++++       ++
T Consensus         6 ~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   85 (274)
T d1xhla_           6 SVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKI   85 (274)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Confidence            6899999999999999999999999999999865432110        11268899999999988877664       48


Q ss_pred             CEEEEeccccCC--------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccc
Q 019878           67 HVIFHTAALVEP--------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEE  135 (334)
Q Consensus        67 d~vih~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~  135 (334)
                      |++||+||....        ..++++..+++|+.++..+.+++.++   ++-.+++++||.......+.           
T Consensus        86 DilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~-----------  154 (274)
T d1xhla_          86 DILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSG-----------  154 (274)
T ss_dssp             CEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTT-----------
T ss_pred             eEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCC-----------
Confidence            999999986321        11235668899999999998888664   23457888887654433222           


Q ss_pred             ccccChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCCCC--chhHHHHHHHHHHcCCCCccccCCCCceeee
Q 019878          136 KYFCTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLT--TGNLVAKLMIERFNGRLPGYIGYGNDRFSFC  209 (334)
Q Consensus       136 ~~~~~~Y~~sK~~~E~~~~~----~~~~g~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  209 (334)
                         ...|+.+|.+.+.+.+.    +.++|+++..+.||.+-.+....  ...................+     ...-+.
T Consensus       155 ---~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~i-----PlgR~g  226 (274)
T d1xhla_         155 ---YPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECI-----PVGHCG  226 (274)
T ss_dssp             ---SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTC-----TTSSCB
T ss_pred             ---CceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCC-----CCCCCc
Confidence               25699999987776655    45679999999999997652100  00111111112111111101     111256


Q ss_pred             eHHHHHHHHHHHhhc---C-CCCCeEEecC
Q 019878          210 HVDDVVDGHIAAMEK---G-RSGERYLLTG  235 (334)
Q Consensus       210 ~v~D~a~a~~~~~~~---~-~~g~~~~i~g  235 (334)
                      ..+|+|+++..++..   . -+|+++.+.|
T Consensus       227 ~pediA~~v~fL~S~d~s~~itG~~i~vDG  256 (274)
T d1xhla_         227 KPEEIANIIVFLADRNLSSYIIGQSIVADG  256 (274)
T ss_dssp             CHHHHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred             CHHHHHHHHHHHcCCccccCccCcEEEeCc
Confidence            799999999988852   2 3799999964

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.76  E-value=1.7e-18  Score=146.14  Aligned_cols=211  Identities=16%  Similarity=0.159  Sum_probs=140.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC--------CCCCCeEEEEcCCCChhhHHHHhc-------CC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL--------PSEGALELVYGDVTDYRSLVDACF-------GC   66 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~~v~~~~~Dl~d~~~~~~~~~-------~~   66 (334)
                      .+|||||++.||.++++.|+++|++|++.+|+.++.+.+        ....++.++.+|++|.+++.++++       ++
T Consensus         7 valVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i   86 (264)
T d1spxa_           7 VAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKL   86 (264)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             EEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            489999999999999999999999999999986543211        111368999999999998877764       48


Q ss_pred             CEEEEeccccCC----------CCCCcccchhhhhHHHHHHHHHHHhcC--CCcEEEEeccc-ceeccCCCccCCCCCcc
Q 019878           67 HVIFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSF-FALGSTDGYIADENQVH  133 (334)
Q Consensus        67 d~vih~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~-~v~~~~~~~~~~e~~~~  133 (334)
                      |++||+||...+          +.++++..+++|+.++..+.+++.+..  .-.++|.++|. +.....+.         
T Consensus        87 DilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~~---------  157 (264)
T d1spxa_          87 DILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPD---------  157 (264)
T ss_dssp             CEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTT---------
T ss_pred             CEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCCC---------
Confidence            999999986321          112356688999999999988886641  11355555554 33322221         


Q ss_pred             ccccccChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCCCCc------hhHHHHHHHHHHcCCCCccccCCC
Q 019878          134 EEKYFCTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTT------GNLVAKLMIERFNGRLPGYIGYGN  203 (334)
Q Consensus       134 ~~~~~~~~Y~~sK~~~E~~~~~----~~~~g~~~~ilR~~~v~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~  203 (334)
                           ...|+.+|.+.+.+.+.    +.++|+++..+.||.|-.+.....      ............+..+.       
T Consensus       158 -----~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-------  225 (264)
T d1spxa_         158 -----FPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPA-------  225 (264)
T ss_dssp             -----SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTT-------
T ss_pred             -----chhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCC-------
Confidence                 25699999987776665    446799999999999976532110      00011111111111111       


Q ss_pred             CceeeeeHHHHHHHHHHHhhcC----CCCCeEEecC
Q 019878          204 DRFSFCHVDDVVDGHIAAMEKG----RSGERYLLTG  235 (334)
Q Consensus       204 ~~~~~i~v~D~a~a~~~~~~~~----~~g~~~~i~g  235 (334)
                        .-+...+|+|+++..++..+    -+|+++.+.|
T Consensus       226 --~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDG  259 (264)
T d1spxa_         226 --GVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDG  259 (264)
T ss_dssp             --SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred             --CCCcCHHHHHHHHHHHhCCcccCCccCceEEeCC
Confidence              12556899999999988532    3799999954

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.76  E-value=2.7e-18  Score=144.61  Aligned_cols=196  Identities=23%  Similarity=0.301  Sum_probs=142.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCC-------C-CCCeEEEEcCCCChhhHHHHhcC------C
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLP-------S-EGALELVYGDVTDYRSLVDACFG------C   66 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-------~-~~~v~~~~~Dl~d~~~~~~~~~~------~   66 (334)
                      ++|||||+|.||.++++.|+++|+ +|++++|+..+.+...       . ..++.++.+|++|.+++.++++.      +
T Consensus        11 t~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~~i   90 (259)
T d2fr1a1          11 TVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVPL   90 (259)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccccccccc
Confidence            589999999999999999999998 5888888754332211       0 13689999999999998887753      7


Q ss_pred             CEEEEeccccCCC------CCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           67 HVIFHTAALVEPW------LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        67 d~vih~a~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      |.|+|+||.....      ..+....+..|+.++.++.+++... ...++|++||....-...+              ..
T Consensus        91 ~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~-~~~~iv~~SS~a~~~g~~~--------------~~  155 (259)
T d2fr1a1          91 SAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-DLTAFVLFSSFASAFGAPG--------------LG  155 (259)
T ss_dssp             EEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-CCSEEEEEEEHHHHTCCTT--------------CT
T ss_pred             cccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhcc-CCceEeeecchhhccCCcc--------------cH
Confidence            8999999974321      1223457889999999999988876 5679999999776543332              25


Q ss_pred             hHHHHHHHHHHHHHHHhhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHH
Q 019878          141 QYERSKAVADKIALQAASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIA  220 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~  220 (334)
                      .|+.+|...+.+.+++..+|++++.+.||.+.+++-..      ..+...+.          ..-...+..+++++++..
T Consensus       156 ~YaAaka~l~~la~~~~~~Gi~v~~I~pg~~~~~g~~~------~~~~~~~~----------~~G~~~~~~~~~~~~l~~  219 (259)
T d2fr1a1         156 GYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMAE------GPVADRFR----------RHGVIEMPPETACRALQN  219 (259)
T ss_dssp             TTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC------------------CT----------TTTEECBCHHHHHHHHHH
T ss_pred             HHHHHHHhHHHHHHHHHhCCCCEEECCCCcccCCcccc------chHHHHHH----------hcCCCCCCHHHHHHHHHH
Confidence            69999999999998888889999999999988764211      11111110          011245779999999999


Q ss_pred             HhhcCCCC
Q 019878          221 AMEKGRSG  228 (334)
Q Consensus       221 ~~~~~~~g  228 (334)
                      ++.+....
T Consensus       220 ~l~~~~~~  227 (259)
T d2fr1a1         220 ALDRAEVC  227 (259)
T ss_dssp             HHHTTCSS
T ss_pred             HHhCCCce
Confidence            99876543

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=6.4e-18  Score=140.71  Aligned_cols=211  Identities=17%  Similarity=0.148  Sum_probs=150.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHh---cCCCEEEEeccccCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC---FGCHVIFHTAALVEP   78 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~---~~~d~vih~a~~~~~   78 (334)
                      ++|||||++.||.++++.|+++|++|++.+|++++.+++.+..+++...+|+.+.+......   .++|++||+||....
T Consensus         8 ~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ag~~~~   87 (245)
T d2ag5a1           8 VIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGFVHH   87 (245)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCCCC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEecccccCC
Confidence            49999999999999999999999999999999876666555568899999999877666554   358999999997433


Q ss_pred             ------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccce-eccCCCccCCCCCccccccccChHHHHHHH
Q 019878           79 ------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFA-LGSTDGYIADENQVHEEKYFCTQYERSKAV  148 (334)
Q Consensus        79 ------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v-~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~  148 (334)
                            ..+++...+++|+.++..+.+++.+.   ....++|++||... ..+.              .....|+.+|.+
T Consensus        88 ~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~--------------~~~~~Y~~sKaa  153 (245)
T d2ag5a1          88 GTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGV--------------VNRCVYSTTKAA  153 (245)
T ss_dssp             BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC--------------TTBHHHHHHHHH
T ss_pred             CChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCc--------------cchhHHHHHHHH
Confidence                  22345678899999999998887653   23458999988542 1111              113679999998


Q ss_pred             HHHHHHHH----hhcCCCEEEEecCceecCCCCCch---hHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHH
Q 019878          149 ADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTG---NLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAA  221 (334)
Q Consensus       149 ~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~  221 (334)
                      .+.+.+.+    .++|+++..+.||.+-.+......   ..............+         ...+...+|+++++..+
T Consensus       154 l~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~p---------l~R~~~pedva~~v~fL  224 (245)
T d2ag5a1         154 VIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQK---------TGRFATAEEIAMLCVYL  224 (245)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCT---------TSSCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHH
Confidence            88877764    456999999999999765210000   000011111122211         12367799999999999


Q ss_pred             hhcC---CCCCeEEecC
Q 019878          222 MEKG---RSGERYLLTG  235 (334)
Q Consensus       222 ~~~~---~~g~~~~i~g  235 (334)
                      +...   -+|+++.+.|
T Consensus       225 ~s~~s~~iTG~~i~VDG  241 (245)
T d2ag5a1         225 ASDESAYVTGNPVIIDG  241 (245)
T ss_dssp             HSGGGTTCCSCEEEECT
T ss_pred             hChhhCCCcCceEEeCC
Confidence            9753   3699998854

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.5e-18  Score=148.57  Aligned_cols=210  Identities=14%  Similarity=0.145  Sum_probs=145.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC--------CC--CCCCeEEEEcCCCChhhHHHHhc-------
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG--------LP--SEGALELVYGDVTDYRSLVDACF-------   64 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------~~--~~~~v~~~~~Dl~d~~~~~~~~~-------   64 (334)
                      ++|||||++.||.++++.|+++|++|++.+|+.++...        +.  ...++.++.+|++|.+++.++++       
T Consensus        14 valITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~G   93 (297)
T d1yxma1          14 VAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFG   93 (297)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            59999999999999999999999999999998643211        11  11368899999999998877764       


Q ss_pred             CCCEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC---CCcEEEEecccceeccCCCccCCCCCcccc
Q 019878           65 GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHEE  135 (334)
Q Consensus        65 ~~d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~  135 (334)
                      ++|++||+||....      ..++++..+++|+.++..+.+++.+..   +..++|++||....+. +.           
T Consensus        94 ~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~~-~~-----------  161 (297)
T d1yxma1          94 KINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGF-PL-----------  161 (297)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCC-TT-----------
T ss_pred             CeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccccc-cc-----------
Confidence            48999999986322      223466788999999999999886542   2346888776433221 11           


Q ss_pred             ccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCc-hhHHHHHHHHHHcCCCCccccCCCCceeeee
Q 019878          136 KYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTT-GNLVAKLMIERFNGRLPGYIGYGNDRFSFCH  210 (334)
Q Consensus       136 ~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  210 (334)
                         ...|+.+|.+.+.+.+.++    ++|+++..+.||.|..+..... ...-..+....... .        ...-+..
T Consensus       162 ---~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~-~--------plgR~g~  229 (297)
T d1yxma1         162 ---AVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQK-I--------PAKRIGV  229 (297)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGG-S--------TTSSCBC
T ss_pred             ---cccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhc-C--------CCCCCcC
Confidence               2669999998887777654    5699999999999976632111 11001111111111 0        1123667


Q ss_pred             HHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          211 VDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       211 v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      .+|+|.++..++...   -+|+++.+.|
T Consensus       230 pedvA~~v~fL~Sd~s~~iTG~~i~VDG  257 (297)
T d1yxma1         230 PEEVSSVVCFLLSPAASFITGQSVDVDG  257 (297)
T ss_dssp             THHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHHhCchhcCcCCcEEEeCc
Confidence            899999999998643   3799999964

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.75  E-value=2.9e-18  Score=145.21  Aligned_cols=215  Identities=14%  Similarity=0.132  Sum_probs=141.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CC----CCCCeEEEEcCCCChhhHHHHhc-------CC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LP----SEGALELVYGDVTDYRSLVDACF-------GC   66 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~----~~~~v~~~~~Dl~d~~~~~~~~~-------~~   66 (334)
                      ++|||||++.||.++++.|+++|++|++.+|++++.+.    +.    ...++.++.+|++|.+++.++++       ++
T Consensus         7 ~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   86 (272)
T d1xkqa_           7 TVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKI   86 (272)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             EEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHhCCc
Confidence            59999999999999999999999999999998654221    10    11258899999999998877664       48


Q ss_pred             CEEEEeccccCCC------CC----CcccchhhhhHHHHHHHHHHHhcC--CCcEEEEecc-cceeccCCCccCCCCCcc
Q 019878           67 HVIFHTAALVEPW------LP----DPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSS-FFALGSTDGYIADENQVH  133 (334)
Q Consensus        67 d~vih~a~~~~~~------~~----~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss-~~v~~~~~~~~~~e~~~~  133 (334)
                      |++||+||.....      .+    ++...+++|+.++..+.+++.+..  +-..+|+++| .+.....+.         
T Consensus        87 DilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~---------  157 (272)
T d1xkqa_          87 DVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPD---------  157 (272)
T ss_dssp             CEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCS---------
T ss_pred             eEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCC---------
Confidence            9999999974321      01    245577899999999998876641  1124555544 443322221         


Q ss_pred             ccccccChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCCCC--chhHHHHHHHHHHcCCCCccccCCCCcee
Q 019878          134 EEKYFCTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLT--TGNLVAKLMIERFNGRLPGYIGYGNDRFS  207 (334)
Q Consensus       134 ~~~~~~~~Y~~sK~~~E~~~~~----~~~~g~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (334)
                           ...|+.+|.+.+.+.+.    +.++|+++..+.||.|-.+....  ...................+     ...-
T Consensus       158 -----~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-----PlgR  227 (272)
T d1xkqa_         158 -----FLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECI-----PIGA  227 (272)
T ss_dssp             -----SHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTC-----TTSS
T ss_pred             -----cchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCC-----CCCC
Confidence                 25699999977776665    44679999999999986542100  00001111111111111101     1112


Q ss_pred             eeeHHHHHHHHHHHhhc---C-CCCCeEEecC
Q 019878          208 FCHVDDVVDGHIAAMEK---G-RSGERYLLTG  235 (334)
Q Consensus       208 ~i~v~D~a~a~~~~~~~---~-~~g~~~~i~g  235 (334)
                      +...+|+|+++..++..   . -+|+++.+.|
T Consensus       228 ~g~pediA~~v~fL~S~~as~~iTG~~i~vDG  259 (272)
T d1xkqa_         228 AGKPEHIANIILFLADRNLSFYILGQSIVADG  259 (272)
T ss_dssp             CBCHHHHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred             CcCHHHHHHHHHHHhCcchhCCccCeEEEeCc
Confidence            66799999999998852   2 4799999964

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.75  E-value=4.2e-18  Score=142.42  Aligned_cols=162  Identities=18%  Similarity=0.186  Sum_probs=119.7

Q ss_pred             Cc-EEEEcCCChhhHHHHHHHH---hCCCeEEEEEcCCCCCCCCC----CCCCeEEEEcCCCChhhHHHHhc--------
Q 019878            1 MK-ILVSGASGYLGGRLCHALL---KQGHSVRALVRRTSDISGLP----SEGALELVYGDVTDYRSLVDACF--------   64 (334)
Q Consensus         1 m~-ilItG~tG~iG~~l~~~L~---~~g~~V~~~~r~~~~~~~~~----~~~~v~~~~~Dl~d~~~~~~~~~--------   64 (334)
                      || ||||||++.||.++++.|+   ++|++|++.+|++++...+.    ...++.++.+|++|.+++.++++        
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            65 9999999999999999997   46899999999987764332    12479999999999988766543        


Q ss_pred             -CCCEEEEeccccCCC----C---CCcccchhhhhHHHHHHHHHHHhcC--------------CCcEEEEeccccee-cc
Q 019878           65 -GCHVIFHTAALVEPW----L---PDPSRFFAVNVEGLKNVVQAAKETK--------------TVEKIIYTSSFFAL-GS  121 (334)
Q Consensus        65 -~~d~vih~a~~~~~~----~---~~~~~~~~~n~~~~~~l~~~~~~~~--------------~~~~~v~~Ss~~v~-~~  121 (334)
                       ++|++||+||.....    .   ++.+..+++|+.++..+.+++....              +..++|++||.... +.
T Consensus        82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~  161 (248)
T d1snya_          82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG  161 (248)
T ss_dssp             GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTT
T ss_pred             CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCC
Confidence             389999999973321    1   1244578999999999988875431              23589999986432 11


Q ss_pred             CCCccCCCCCccccccccChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecC
Q 019878          122 TDGYIADENQVHEEKYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGP  174 (334)
Q Consensus       122 ~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~  174 (334)
                      ...            .....|+.||++...+.+.+    .++|+++..+.||.|-.+
T Consensus       162 ~~~------------~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~  206 (248)
T d1snya_         162 NTD------------GGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD  206 (248)
T ss_dssp             CCS------------CCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred             CCC------------CChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence            110            01257999999777766654    456999999999998654

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=2.8e-18  Score=143.92  Aligned_cols=201  Identities=19%  Similarity=0.213  Sum_probs=137.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----C---CCCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----P---SEGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~---~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      ++|||||++.||.++++.|+++|++|++.+|++++.+.+    .   ...++.++.+|++|++++.++++       ++|
T Consensus        12 v~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g~iD   91 (257)
T d1xg5a_          12 LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVD   91 (257)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCCS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence            499999999999999999999999999999987543221    1   11368889999999998877653       489


Q ss_pred             EEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHh----cC-CCcEEEEecccceeccCCCccCCCCCccccc
Q 019878           68 VIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKE----TK-TVEKIIYTSSFFALGSTDGYIADENQVHEEK  136 (334)
Q Consensus        68 ~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~  136 (334)
                      ++||+||....      ..++++..+++|+.++..+.+.+.+    .+ .-.++|++||.+.+...+..           
T Consensus        92 ~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~-----------  160 (257)
T d1xg5a_          92 ICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLS-----------  160 (257)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCG-----------
T ss_pred             EEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCc-----------
Confidence            99999997432      2234566889999999888777643    22 23589999998754322211           


Q ss_pred             cccChHHHHHHHHHHHHHHHh------hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeee
Q 019878          137 YFCTQYERSKAVADKIALQAA------SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCH  210 (334)
Q Consensus       137 ~~~~~Y~~sK~~~E~~~~~~~------~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  210 (334)
                       ....|+.+|...+.+.+.+.      ++|+++..+-|+.+-.+................   .         ....++.
T Consensus       161 -~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~---~---------~~~r~~~  227 (257)
T d1xg5a_         161 -VTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAAT---Y---------EQMKCLK  227 (257)
T ss_dssp             -GGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHH---H---------C---CBC
T ss_pred             -ccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhc---C---------CCCCCcC
Confidence             12569999998887776543      468999999998775431000000000111110   0         1123667


Q ss_pred             HHHHHHHHHHHhhcCC
Q 019878          211 VDDVVDGHIAAMEKGR  226 (334)
Q Consensus       211 v~D~a~a~~~~~~~~~  226 (334)
                      .+|+|+++..++..+.
T Consensus       228 pedvA~~v~fL~s~~a  243 (257)
T d1xg5a_         228 PEDVAEAVIYVLSTPA  243 (257)
T ss_dssp             HHHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHHHhCChh
Confidence            9999999999987654

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.74  E-value=4.3e-18  Score=143.10  Aligned_cols=210  Identities=15%  Similarity=0.064  Sum_probs=142.3

Q ss_pred             cEEEEcCCC--hhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CCCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASG--YLGGRLCHALLKQGHSVRALVRRTSDISGL----PSEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+|  .||.++++.|+++|++|++.+|++......    .......++.+|++|.+++.++++       ++|+
T Consensus        10 ~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDi   89 (256)
T d1ulua_          10 KALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGLDY   89 (256)
T ss_dssp             EEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred             EEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCCceE
Confidence            599999998  799999999999999999988875422110    111357789999999988877764       4899


Q ss_pred             EEEeccccCC----------CCCCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCcccccc
Q 019878           69 IFHTAALVEP----------WLPDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        69 vih~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~  137 (334)
                      +||+|+....          ...++...+++|+.++..+++.+.... .-.++|++||.......+.             
T Consensus        90 lVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~-------------  156 (256)
T d1ulua_          90 LVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPK-------------  156 (256)
T ss_dssp             EEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTT-------------
T ss_pred             EEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCCC-------------
Confidence            9999986321          112344578899999999999887652 1147999998766543322             


Q ss_pred             ccChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHH
Q 019878          138 FCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                       ...|+.+|.+.+.+.+.+    .++|+++..+.|+.+..+...... ..........+..+.         .-+...+|
T Consensus       157 -~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~-~~~~~~~~~~~~~pl---------~R~~~ped  225 (256)
T d1ulua_         157 -YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIP-GFTKMYDRVAQTAPL---------RRNITQEE  225 (256)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------CHHHHHHHHHHSTT---------SSCCCHHH
T ss_pred             -chHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchh-hhHHHHHHHHhcCCC---------CCCcCHHH
Confidence             267999999888776654    467999999999999776432111 011222222222221         12556899


Q ss_pred             HHHHHHHHhhcC---CCCCeEEecC
Q 019878          214 VVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       214 ~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +|+++..++...   -+|+++.+.|
T Consensus       226 vA~~v~fL~S~~s~~itG~~i~VDG  250 (256)
T d1ulua_         226 VGNLGLFLLSPLASGITGEVVYVDA  250 (256)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHhCchhCCccCCeEEECc
Confidence            999999998643   3688988854

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.74  E-value=2.5e-17  Score=141.05  Aligned_cols=218  Identities=16%  Similarity=0.058  Sum_probs=150.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC-----------CCeEEEEcCCCChhhHHHHhc------
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-----------GALELVYGDVTDYRSLVDACF------   64 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----------~~v~~~~~Dl~d~~~~~~~~~------   64 (334)
                      ++|||||++.||.++++.|+++|++|++.+|+.+........           .....+.+|+.|.+...++++      
T Consensus         9 valITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~~   88 (302)
T d1gz6a_           9 VVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTALDTF   88 (302)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHHHHT
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHc
Confidence            499999999999999999999999999999876543221111           123456678888776655542      


Q ss_pred             -CCCEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC---CCcEEEEecccceeccCCCccCCCCCccc
Q 019878           65 -GCHVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK---TVEKIIYTSSFFALGSTDGYIADENQVHE  134 (334)
Q Consensus        65 -~~d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~  134 (334)
                       ++|++||+||....      ..++++..+++|+.++..+.+++..+.   +-.++|++||........+          
T Consensus        89 G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~----------  158 (302)
T d1gz6a_          89 GRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFG----------  158 (302)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT----------
T ss_pred             CCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCC----------
Confidence             58999999997432      223466788999999999999876541   3469999999776543322          


Q ss_pred             cccccChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeee
Q 019878          135 EKYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCH  210 (334)
Q Consensus       135 ~~~~~~~Y~~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  210 (334)
                          ...|+.+|...+.+.+.+    .++|+++..+.|+.+-...    ...+..                  ....++.
T Consensus       159 ----~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~----~~~~~~------------------~~~~~~~  212 (302)
T d1gz6a_         159 ----QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMT----ETVMPE------------------DLVEALK  212 (302)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTT----GGGSCH------------------HHHHHSC
T ss_pred             ----cHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcch----hhcCcH------------------hhHhcCC
Confidence                266999999877766654    4569999999998763221    111111                  1112344


Q ss_pred             HHHHHHHHHHHhhcC--CCCCeEEec-C-------------------CCCCHHHHHHHHHHHhCCCC
Q 019878          211 VDDVVDGHIAAMEKG--RSGERYLLT-G-------------------ENASFMQIFDMAAVITGTSR  255 (334)
Q Consensus       211 v~D~a~a~~~~~~~~--~~g~~~~i~-g-------------------~~~s~~e~~~~i~~~~g~~~  255 (334)
                      .+|+|.+++.++...  .+|+++.+. |                   ++.|..++.+...++.....
T Consensus       213 PedvA~~v~fL~S~~a~itG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~t~e~i~~~~~~i~d~~~  279 (302)
T d1gz6a_         213 PEYVAPLVLWLCHESCEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDFSN  279 (302)
T ss_dssp             GGGTHHHHHHHTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTCCTT
T ss_pred             HHHHHHHHHHHcCCCcCCCCcEEEeCCCceeEEEEeecCcccccCCCCCCCHHHHHHHHHHHhCccc
Confidence            799999999987532  246665542 1                   23577888888887765443

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=2.6e-17  Score=140.05  Aligned_cols=212  Identities=17%  Similarity=0.094  Sum_probs=138.9

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEEcCC---CCCCC-------C-CCCCCeEEEEcCCCChhhHHHHhcC-----C
Q 019878            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRT---SDISG-------L-PSEGALELVYGDVTDYRSLVDACFG-----C   66 (334)
Q Consensus         3 ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~---~~~~~-------~-~~~~~v~~~~~Dl~d~~~~~~~~~~-----~   66 (334)
                      ||||||++.||.++++.|+++|.+|+.+.+..   +....       + ....++.++.+|++|.+++.++++.     +
T Consensus         5 vlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g~i   84 (285)
T d1jtva_           5 VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGRV   84 (285)
T ss_dssp             EEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSCC
T ss_pred             EEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccccch
Confidence            78999999999999999999998876665432   21110       1 1124789999999999998887643     8


Q ss_pred             CEEEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCcccccc
Q 019878           67 HVIFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKY  137 (334)
Q Consensus        67 d~vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~  137 (334)
                      |+++|+|+....      ..+++...+++|+.++.++.+++..+   .+-.++|++||.....+.+.             
T Consensus        85 dilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~-------------  151 (285)
T d1jtva_          85 DVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPF-------------  151 (285)
T ss_dssp             SEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTT-------------
T ss_pred             hhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCC-------------
Confidence            999999987432      22345668899999999998887553   13469999999766543322             


Q ss_pred             ccChHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCCCCch------------hHHHHHHHHHHcCCCCccccC
Q 019878          138 FCTQYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGKLTTG------------NLVAKLMIERFNGRLPGYIGY  201 (334)
Q Consensus       138 ~~~~Y~~sK~~~E~~~~~----~~~~g~~~~ilR~~~v~G~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~  201 (334)
                       ...|+.+|++.+.+.+.    +.++|+++..+.||.|-.+......            .....+..........     
T Consensus       152 -~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  225 (285)
T d1jtva_         152 -NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQV-----  225 (285)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHH-----
T ss_pred             -chHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhh-----
Confidence             36799999977766655    4456999999999998654211100            0011111100000000     


Q ss_pred             CCCceeeeeHHHHHHHHHHHhhcCCCCCeEEecCC
Q 019878          202 GNDRFSFCHVDDVVDGHIAAMEKGRSGERYLLTGE  236 (334)
Q Consensus       202 ~~~~~~~i~v~D~a~a~~~~~~~~~~g~~~~i~g~  236 (334)
                        ........+|+|++++.++..+.+.- ..++++
T Consensus       226 --~~~~~~~PeeVA~~v~~~~~~~~p~~-ry~~g~  257 (285)
T d1jtva_         226 --FREAAQNPEEVAEVFLTALRAPKPTL-RYFTTE  257 (285)
T ss_dssp             --HHHHCBCHHHHHHHHHHHHHCSSCCS-EEESCS
T ss_pred             --hcccCCCHHHHHHHHHHHHhCCCCCe-EEecHH
Confidence              01124468999999999998765443 344454

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.72  E-value=1.1e-17  Score=140.59  Aligned_cols=212  Identities=18%  Similarity=0.134  Sum_probs=142.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC-CC----CCC-CCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-SG----LPS-EGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~----~~~-~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||++.||.++++.|+++|++|++..++..+. +.    +.. ..++.++.+|++|.+++.+.++       .+|+
T Consensus         8 ~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idi   87 (259)
T d1ja9a_           8 VALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDF   87 (259)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            589999999999999999999999999877654321 11    111 1368899999999988877664       4899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEecc-cceeccCCCccCCCCCccccccccC
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSS-FFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~Ss-~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      +||+||....      ..++++..+++|+.+...+++.+.++.. -.+.+.++| .+.+...+.              ..
T Consensus        88 linnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~~--------------~~  153 (259)
T d1ja9a_          88 VMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPN--------------HA  153 (259)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCS--------------CH
T ss_pred             EEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCCC--------------ch
Confidence            9999997432      2234567889999999999999987631 124555554 333322221              25


Q ss_pred             hHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC--------C-CCchhHHHHHHHHHHcCCCCccccCCCCcee
Q 019878          141 QYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG--------K-LTTGNLVAKLMIERFNGRLPGYIGYGNDRFS  207 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (334)
                      .|+.+|.+.+.+.+.+    .++|+++..+.||.+-.+.        . ..........+........|        ..-
T Consensus       154 ~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--------l~R  225 (259)
T d1ja9a_         154 LYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNP--------LKR  225 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTST--------TSS
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCC--------CCC
Confidence            6999999877766654    4569999999999985421        0 00000111122222211111        123


Q ss_pred             eeeHHHHHHHHHHHhhcCC---CCCeEEecC
Q 019878          208 FCHVDDVVDGHIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       208 ~i~v~D~a~a~~~~~~~~~---~g~~~~i~g  235 (334)
                      +...+|+++++..++....   +|+++.+.|
T Consensus       226 ~g~p~eVa~~v~fL~S~~a~~itG~~i~vDG  256 (259)
T d1ja9a_         226 IGYPADIGRAVSALCQEESEWINGQVIKLTG  256 (259)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CcCHHHHHHHHHHHhCchhcCCcCceEEeCC
Confidence            6679999999999987543   688988864

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=1.3e-18  Score=144.44  Aligned_cols=188  Identities=13%  Similarity=0.062  Sum_probs=137.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC-----CCCCeEEEEcCCCChhhHHHHhc-------CCCEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP-----SEGALELVYGDVTDYRSLVDACF-------GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~v   69 (334)
                      ++|||||++.||.++++.|+++|++|++.+|+.++.+.+.     ...++..+.+|++|.+++.++++       .+|++
T Consensus         9 v~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~idil   88 (244)
T d1yb1a_           9 IVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSIL   88 (244)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCcee
Confidence            5899999999999999999999999999999876533211     11368999999999998877663       48999


Q ss_pred             EEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           70 FHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        70 ih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      ||+||....      ..+.++..+++|+.++.++.+++.++   ++-.++|++||...+.+.+.              ..
T Consensus        89 innag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~--------------~~  154 (244)
T d1yb1a_          89 VNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPF--------------LL  154 (244)
T ss_dssp             EECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHH--------------HH
T ss_pred             EeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCC--------------cH
Confidence            999997432      11235578899999999998877654   24568999999876543221              36


Q ss_pred             hHHHHHHHHHHHHHHHh----h---cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHH
Q 019878          141 QYERSKAVADKIALQAA----S---EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDD  213 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~----~---~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  213 (334)
                      .|+.||++.+.+.+.+.    +   .|+++..+.||.|-.+.....   .                   ......+..+|
T Consensus       155 ~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~---~-------------------~~~~~~~~pe~  212 (244)
T d1yb1a_         155 AYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP---S-------------------TSLGPTLEPEE  212 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT---H-------------------HHHCCCCCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCc---C-------------------ccccCCCCHHH
Confidence            79999998777666543    3   379999999998855432110   0                   01112345899


Q ss_pred             HHHHHHHHhhcC
Q 019878          214 VVDGHIAAMEKG  225 (334)
Q Consensus       214 ~a~a~~~~~~~~  225 (334)
                      +++.+...+..+
T Consensus       213 va~~i~~~~~~~  224 (244)
T d1yb1a_         213 VVNRLMHGILTE  224 (244)
T ss_dssp             HHHHHHHHHHTT
T ss_pred             HHHHHHHHHhcC
Confidence            999999887764

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.72  E-value=5.8e-18  Score=143.59  Aligned_cols=212  Identities=17%  Similarity=0.199  Sum_probs=143.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC--CCeEEEEcCCCChhhHHHHhc-------CCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSLVDACF-------GCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~v~~~~~Dl~d~~~~~~~~~-------~~d~vih~   72 (334)
                      ++|||||++.||.++++.|+++|++|++++|++++...+...  .++..+.+|+++.+++.++++       .+|++||+
T Consensus         7 ~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idilvnn   86 (276)
T d1bdba_           7 AVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPN   86 (276)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCccccccc
Confidence            399999999999999999999999999999987644322111  368999999999988877653       58999999


Q ss_pred             ccccCCC-------CC----CcccchhhhhHHHHHHHHHHHhcC--CCcEEEEecccceeccCCCccCCCCCcccccccc
Q 019878           73 AALVEPW-------LP----DPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFC  139 (334)
Q Consensus        73 a~~~~~~-------~~----~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~  139 (334)
                      ||.....       .+    +++..+++|+.++..+.+++.++.  .-.++|++||...+.+.+.              .
T Consensus        87 AG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~~~~--------------~  152 (276)
T d1bdba_          87 AGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGG--------------G  152 (276)
T ss_dssp             CCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSTTSS--------------C
T ss_pred             ccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccCCCC--------------C
Confidence            9973221       11    245678999999999888875431  1247888887654432221              2


Q ss_pred             ChHHHHHHHHHHHHHHHhh---cCCCEEEEecCceecCCCCCch------hHHHHHHHHHHcCCCCccccCCCCceeeee
Q 019878          140 TQYERSKAVADKIALQAAS---EGLPIVPVYPGVIYGPGKLTTG------NLVAKLMIERFNGRLPGYIGYGNDRFSFCH  210 (334)
Q Consensus       140 ~~Y~~sK~~~E~~~~~~~~---~g~~~~ilR~~~v~G~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  210 (334)
                      ..|+.+|.+.+.+.+.++.   .++++..+.||.|-.+......      ......+........|        ..-+..
T Consensus       153 ~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~P--------lgR~g~  224 (276)
T d1bdba_         153 PLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLP--------IGRMPE  224 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCT--------TSSCCC
T ss_pred             chHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCC--------CCCCcC
Confidence            5699999988877766542   2599999999998655321110      0011111222222222        112556


Q ss_pred             HHHHHHHHHHHhhc---C-CCCCeEEecC
Q 019878          211 VDDVVDGHIAAMEK---G-RSGERYLLTG  235 (334)
Q Consensus       211 v~D~a~a~~~~~~~---~-~~g~~~~i~g  235 (334)
                      .+|+|+++..++..   . -+|+++++.|
T Consensus       225 peeva~~v~fL~S~~~a~~itG~~i~VDG  253 (276)
T d1bdba_         225 VEEYTGAYVFFATRGDAAPATGALLNYDG  253 (276)
T ss_dssp             GGGGSHHHHHHHCHHHHTTCSSCEEEESS
T ss_pred             HHHHHHHHHHHcCCcccCCeeCcEEEECc
Confidence            89999999887642   2 3799999964

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.71  E-value=2.8e-17  Score=140.94  Aligned_cols=211  Identities=12%  Similarity=0.082  Sum_probs=140.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC----C--CCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----S--EGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~--~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||+|.||.++++.|+++|++|++++|+.++.....    .  ...+.++.+|++|.+++.++++       .+|+
T Consensus        27 ~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDi  106 (294)
T d1w6ua_          27 VAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNI  106 (294)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccccch
Confidence            4999999999999999999999999999999865432111    0  1367899999999998776553       4899


Q ss_pred             EEEeccccCCC------CCCcccchhhhhHHHHHHHHHHH----hcCCCcEEEEecccceeccCCCccCCCCCccccccc
Q 019878           69 IFHTAALVEPW------LPDPSRFFAVNVEGLKNVVQAAK----ETKTVEKIIYTSSFFALGSTDGYIADENQVHEEKYF  138 (334)
Q Consensus        69 vih~a~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~  138 (334)
                      +||+||.....      ..+....+.+|..+...+...+.    .......++.+||.......+.              
T Consensus       107 lvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~--------------  172 (294)
T d1w6ua_         107 VINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGF--------------  172 (294)
T ss_dssp             EEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTT--------------
T ss_pred             hhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccc--------------
Confidence            99999974321      12234566778777766655543    2223456777777654433322              


Q ss_pred             cChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          139 CTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       139 ~~~Y~~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      ...|+.+|.+.+.+.+.+    .++|+++..+.||.+-.+....................+.         .-+...+|+
T Consensus       173 ~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl---------~R~~~pedi  243 (294)
T d1w6ua_         173 VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPC---------GRLGTVEEL  243 (294)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTT---------SSCBCHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCC---------CCCCCHHHH
Confidence            256999999888877764    4569999999999997653211100001122222222221         125569999


Q ss_pred             HHHHHHHhhcC---CCCCeEEecC
Q 019878          215 VDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       215 a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      |+++..++...   -+|++..+.|
T Consensus       244 A~~v~fL~sd~s~~itG~~i~vDG  267 (294)
T d1w6ua_         244 ANLAAFLCSDYASWINGAVIKFDG  267 (294)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHhCchhcCCCCcEEEECC
Confidence            99999998643   3799999964

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.70  E-value=9.5e-18  Score=141.15  Aligned_cols=206  Identities=15%  Similarity=0.170  Sum_probs=142.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHh---CCCeEEEEEcCCCCCCCCC-------CCCCeEEEEcCCCChhhHHHHhc-------
Q 019878            2 KILVSGASGYLGGRLCHALLK---QGHSVRALVRRTSDISGLP-------SEGALELVYGDVTDYRSLVDACF-------   64 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~-------~~~~v~~~~~Dl~d~~~~~~~~~-------   64 (334)
                      .++||||++.||.++++.|++   +|++|++++|+.++.+.+.       ...++.++.+|++|.+++.++++       
T Consensus         8 valITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~~~~   87 (259)
T d1oaaa_           8 VCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPR   87 (259)
T ss_dssp             EEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSCC
T ss_pred             EEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHhhh
Confidence            379999999999999999985   7999999999876433221       11268899999999988877652       


Q ss_pred             ----CCCEEEEeccccCCC------C---CCcccchhhhhHHHHHHHHHHHhcCC-----CcEEEEecccceeccCCCcc
Q 019878           65 ----GCHVIFHTAALVEPW------L---PDPSRFFAVNVEGLKNVVQAAKETKT-----VEKIIYTSSFFALGSTDGYI  126 (334)
Q Consensus        65 ----~~d~vih~a~~~~~~------~---~~~~~~~~~n~~~~~~l~~~~~~~~~-----~~~~v~~Ss~~v~~~~~~~~  126 (334)
                          ..|++||+||.....      +   +++...+++|+.++..+.+++.++..     ..++|++||...+.+.+.  
T Consensus        88 ~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~~~~--  165 (259)
T d1oaaa_          88 PEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKG--  165 (259)
T ss_dssp             CTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCTT--
T ss_pred             hccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCCCcc--
Confidence                257999999864221      1   13456889999999999999987632     247999999766543322  


Q ss_pred             CCCCCccccccccChHHHHHHHHHHHHHHHhh--cCCCEEEEecCceecCCCCC-----chhHHHHHHHHHHcCCCCccc
Q 019878          127 ADENQVHEEKYFCTQYERSKAVADKIALQAAS--EGLPIVPVYPGVIYGPGKLT-----TGNLVAKLMIERFNGRLPGYI  199 (334)
Q Consensus       127 ~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~--~g~~~~ilR~~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~  199 (334)
                                  ...|+.+|.+.+.+.+.+..  +|+++..+.||.+-.+....     ........+.....       
T Consensus       166 ------------~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~-------  226 (259)
T d1oaaa_         166 ------------WGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKS-------  226 (259)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHH-------
T ss_pred             ------------chHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCC-------
Confidence                        36799999999988888763  58999999999986542100     00000011111100       


Q ss_pred             cCCCCceeeeeHHHHHHHHHHHhhcC--CCCCeEEe
Q 019878          200 GYGNDRFSFCHVDDVVDGHIAAMEKG--RSGERYLL  233 (334)
Q Consensus       200 ~~~~~~~~~i~v~D~a~a~~~~~~~~--~~g~~~~i  233 (334)
                           ...+...+|+|++++.++...  .+|+.+++
T Consensus       227 -----~~r~~~p~evA~~i~~ll~~~s~~TG~~idv  257 (259)
T d1oaaa_         227 -----DGALVDCGTSAQKLLGLLQKDTFQSGAHVDF  257 (259)
T ss_dssp             -----TTCSBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred             -----CCCCCCHHHHHHHHHHHhhhccCCCCCeEEe
Confidence                 012456899999999888653  24665554

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.69  E-value=1.1e-16  Score=133.85  Aligned_cols=203  Identities=18%  Similarity=0.155  Sum_probs=134.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC--eEEEEEcCCCCCCCCCCC--CCeEEEEcCCCChhhHHHHhc---------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSDISGLPSE--GALELVYGDVTDYRSLVDACF---------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~--~~v~~~~~Dl~d~~~~~~~~~---------~~d~   68 (334)
                      +||||||++.||.+++++|+++|+  +|++.+|+.++...+.+.  .++.++.+|++|.+++.++++         ++|+
T Consensus         5 tilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~idi   84 (250)
T d1yo6a1           5 SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSL   84 (250)
T ss_dssp             EEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCeEE
Confidence            599999999999999999999995  688889987765443222  378999999999988766642         2899


Q ss_pred             EEEeccccCC----CC---CCcccchhhhhHHHHHHHHHHHhcC--------------CCcEEEEecccceeccCCCccC
Q 019878           69 IFHTAALVEP----WL---PDPSRFFAVNVEGLKNVVQAAKETK--------------TVEKIIYTSSFFALGSTDGYIA  127 (334)
Q Consensus        69 vih~a~~~~~----~~---~~~~~~~~~n~~~~~~l~~~~~~~~--------------~~~~~v~~Ss~~v~~~~~~~~~  127 (334)
                      +||+||....    .+   ++.+..+++|+.++..+.+.+....              ...+++.+|+...+-...... 
T Consensus        85 linnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~~~-  163 (250)
T d1yo6a1          85 LINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSG-  163 (250)
T ss_dssp             EEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCST-
T ss_pred             EEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCCccc-
Confidence            9999997432    11   1245688999999999988876431              124677777654432211100 


Q ss_pred             CCCCccccccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCC
Q 019878          128 DENQVHEEKYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGN  203 (334)
Q Consensus       128 ~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (334)
                            .+..+...|+.||++...+.+.+.    +.|+++..+.||.|-.+-.                +.         
T Consensus       164 ------~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~----------------~~---------  212 (250)
T d1yo6a1         164 ------SAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLG----------------GK---------  212 (250)
T ss_dssp             ------TSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------------------
T ss_pred             ------ccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCC----------------CC---------
Confidence                  001113569999998887776654    4589999999998853310                00         


Q ss_pred             CceeeeeHHHHHHHHHHHhhcC---CCCCeEEecCCCC
Q 019878          204 DRFSFCHVDDVVDGHIAAMEKG---RSGERYLLTGENA  238 (334)
Q Consensus       204 ~~~~~i~v~D~a~a~~~~~~~~---~~g~~~~i~g~~~  238 (334)
                        ...+..++.++.++..+...   ..|.+|+-.++++
T Consensus       213 --~~~~~~e~~a~~~~~~~~~~~~~~sG~f~~~~g~p~  248 (250)
T d1yo6a1         213 --NAALTVEQSTAELISSFNKLDNSHNGRFFMRNLKPY  248 (250)
T ss_dssp             --------HHHHHHHHHHHTTCCGGGTTCEEETTEEEC
T ss_pred             --CCCCCHHHHHHHHHHHHhcCCCCCCeEEECCCCeeC
Confidence              01235788888888888653   3577776544443

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.69  E-value=3.3e-16  Score=129.62  Aligned_cols=194  Identities=15%  Similarity=0.098  Sum_probs=137.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHH-------hc--CCCEEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-------CF--GCHVIFH   71 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-------~~--~~d~vih   71 (334)
                      ++||||||+|.||.++++.|+++|++|+++++.+.....     ....+..|..+.+.....       +.  ++|++||
T Consensus         3 K~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lIn   77 (236)
T d1dhra_           3 RRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS-----ASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILC   77 (236)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS-----EEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc-----ccceeecccCcHHHHHHHHHHHHHHhCCCCceEEEE
Confidence            479999999999999999999999999999987654321     344555666555443322       22  3899999


Q ss_pred             eccccC---CCC----CCcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCccccccccChHH
Q 019878           72 TAALVE---PWL----PDPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYE  143 (334)
Q Consensus        72 ~a~~~~---~~~----~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~  143 (334)
                      +||...   ...    ++++..+++|+.++.++.+++.++. .-.++|++||.....+.+.              ...|+
T Consensus        78 nAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~--------------~~~Y~  143 (236)
T d1dhra_          78 VAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPG--------------MIGYG  143 (236)
T ss_dssp             CCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT--------------BHHHH
T ss_pred             CCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccC--------------CcccH
Confidence            998521   111    2345578999999999999987752 2248999999876544332              26799


Q ss_pred             HHHHHHHHHHHHHhh------cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHH
Q 019878          144 RSKAVADKIALQAAS------EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDG  217 (334)
Q Consensus       144 ~sK~~~E~~~~~~~~------~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  217 (334)
                      .||.+.+.+.+.+..      +|+++..+.||.+..+.           .......         ...-.|+..+|+++.
T Consensus       144 asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~-----------~~~~~~~---------~~~~~~~~pe~va~~  203 (236)
T d1dhra_         144 MAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM-----------NRKSMPE---------ADFSSWTPLEFLVET  203 (236)
T ss_dssp             HHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH-----------HHHHSTT---------SCGGGSEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCc-----------chhhCcc---------chhhcCCCHHHHHHH
Confidence            999999999998752      47999999999996531           1111111         122357889999999


Q ss_pred             HHHHhhcC---CCCCeEEe
Q 019878          218 HIAAMEKG---RSGERYLL  233 (334)
Q Consensus       218 ~~~~~~~~---~~g~~~~i  233 (334)
                      +..++...   ..|.++.+
T Consensus       204 ~~~l~s~~~~~i~G~~i~v  222 (236)
T d1dhra_         204 FHDWITGNKRPNSGSLIQV  222 (236)
T ss_dssp             HHHHHTTTTCCCTTCEEEE
T ss_pred             HHHHhCCCccCCCCCeEEE
Confidence            99988754   35777665

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=3.4e-16  Score=130.72  Aligned_cols=207  Identities=22%  Similarity=0.192  Sum_probs=140.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC--CCeEEEEcCCCChhhHHHHh-------cCCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSLVDAC-------FGCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~v~~~~~Dl~d~~~~~~~~-------~~~d~vih~   72 (334)
                      ++|||||++.||.++++.|+++|++|++++|+.+..+...+.  ........|+.+.+...+..       ...|.++++
T Consensus         7 valITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (248)
T d2o23a1           7 VAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNC   86 (248)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCcccccccccccccccccccccccccccccccccc
Confidence            589999999999999999999999999999988654321110  26788889999887665443       247888888


Q ss_pred             ccccCC------------CCCCcccchhhhhHHHHHHHHHHHhcC---------CCcEEEEecccceeccCCCccCCCCC
Q 019878           73 AALVEP------------WLPDPSRFFAVNVEGLKNVVQAAKETK---------TVEKIIYTSSFFALGSTDGYIADENQ  131 (334)
Q Consensus        73 a~~~~~------------~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~~v~~Ss~~v~~~~~~~~~~e~~  131 (334)
                      ++....            ..+++...+++|+.++.++.+++..+.         +-.++|++||...+.+.+.       
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~-------  159 (248)
T d2o23a1          87 AGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVG-------  159 (248)
T ss_dssp             CCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTT-------
T ss_pred             cccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCC-------
Confidence            765221            112345678999999999999986541         2247999999876643332       


Q ss_pred             ccccccccChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCcee
Q 019878          132 VHEEKYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFS  207 (334)
Q Consensus       132 ~~~~~~~~~~Y~~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (334)
                             ...|+.+|.+.+.+.+.+    .++|+++..+.||.+..+....   ............ .+ +.      .-
T Consensus       160 -------~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~---~~~~~~~~~~~~-~p-l~------~R  221 (248)
T d2o23a1         160 -------QAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS---LPEKVCNFLASQ-VP-FP------SR  221 (248)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------------CHHHHT-CS-SS------CS
T ss_pred             -------chHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhc---CCHHHHHHHHhc-CC-CC------CC
Confidence                   266999999888777765    4569999999999987654211   111111111111 11 00      12


Q ss_pred             eeeHHHHHHHHHHHhhcCC-CCCeEEe
Q 019878          208 FCHVDDVVDGHIAAMEKGR-SGERYLL  233 (334)
Q Consensus       208 ~i~v~D~a~a~~~~~~~~~-~g~~~~i  233 (334)
                      +...+|+|+++..+++.+. +|++.++
T Consensus       222 ~g~peevA~~v~fL~s~~~itGq~I~v  248 (248)
T d2o23a1         222 LGDPAEYAHLVQAIIENPFLNGEVIRL  248 (248)
T ss_dssp             CBCHHHHHHHHHHHHHCTTCCSCEEEE
T ss_pred             CcCHHHHHHHHHHHHhCCCCCceEeEC
Confidence            5579999999999987643 5766553

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.68  E-value=3.3e-16  Score=132.52  Aligned_cols=211  Identities=16%  Similarity=0.107  Sum_probs=143.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC-CC----CC-CCCCeEEEEcCCCChhhHHHHhc-------CCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-SG----LP-SEGALELVYGDVTDYRSLVDACF-------GCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~----~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~   68 (334)
                      ++|||||++.||.++++.|+++|++|++.+|+.... +.    +. ....+.++.+|++|.+++.+.++       .+|+
T Consensus        20 ~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idi   99 (272)
T d1g0oa_          20 VALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDI   99 (272)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCCCCc
Confidence            599999999999999999999999999998875421 10    11 11368899999999988877764       4899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEecccceec-cCCCccCCCCCccccccccC
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALG-STDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~Ss~~v~~-~~~~~~~~e~~~~~~~~~~~  140 (334)
                      +||+++....      ..+++...+++|+.++..+++++..+.. -.+.++++|..... ...              ...
T Consensus       100 lV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~~--------------~~~  165 (272)
T d1g0oa_         100 VCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVP--------------KHA  165 (272)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCS--------------SCH
T ss_pred             cccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccccccccc--------------chh
Confidence            9999997432      2224556889999999999999987632 23677777654221 111              136


Q ss_pred             hHHHHHHHHHHHHHH----HhhcCCCEEEEecCceecCCC--------CCchhHHHHHH-HH-HHcCCCCccccCCCCce
Q 019878          141 QYERSKAVADKIALQ----AASEGLPIVPVYPGVIYGPGK--------LTTGNLVAKLM-IE-RFNGRLPGYIGYGNDRF  206 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~----~~~~g~~~~ilR~~~v~G~~~--------~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~  206 (334)
                      .|+.+|++.+.+.+.    +.++|+++..+.||.+-.+..        ........... .. .....+         ..
T Consensus       166 ~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P---------lg  236 (272)
T d1g0oa_         166 VYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSP---------LR  236 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCT---------TC
T ss_pred             hHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCC---------CC
Confidence            699999988877765    446799999999999954310        00000000111 11 111111         11


Q ss_pred             eeeeHHHHHHHHHHHhhcCC---CCCeEEecC
Q 019878          207 SFCHVDDVVDGHIAAMEKGR---SGERYLLTG  235 (334)
Q Consensus       207 ~~i~v~D~a~a~~~~~~~~~---~g~~~~i~g  235 (334)
                      -+...+|+|.++..++....   +|.+..+.|
T Consensus       237 R~~~peevA~~v~fL~s~~s~~itG~~i~vDG  268 (272)
T d1g0oa_         237 RVGLPIDIARVVCFLASNDGGWVTGKVIGIDG  268 (272)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CCcCHHHHHHHHHHHhCchhcCccCceEeECC
Confidence            36779999999999986532   688888854

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.67  E-value=4.3e-16  Score=128.89  Aligned_cols=193  Identities=16%  Similarity=0.142  Sum_probs=134.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHH-------h--cCCCEEEEe
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-------C--FGCHVIFHT   72 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-------~--~~~d~vih~   72 (334)
                      |||||||+|.||.++++.|+++|++|++++|++.....     ....+.+|..+.+.....       +  .++|++||+
T Consensus         4 kVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~linn   78 (235)
T d1ooea_           4 KVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD-----SNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCV   78 (235)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS-----EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhccc-----ccceeccccCchhHHHHHHHHHHHHhcCCCeeEEEEC
Confidence            69999999999999999999999999999998764321     344556676655443222       2  238999999


Q ss_pred             ccccCC---CCC----CcccchhhhhHHHHHHHHHHHhcC-CCcEEEEecccceeccCCCccCCCCCccccccccChHHH
Q 019878           73 AALVEP---WLP----DPSRFFAVNVEGLKNVVQAAKETK-TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYER  144 (334)
Q Consensus        73 a~~~~~---~~~----~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~  144 (334)
                      ||....   ...    .++..+++|+.++..+.+.+..+. .-.++|++||...+.+.+.              ...|+.
T Consensus        79 AG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~--------------~~~Y~a  144 (235)
T d1ooea_          79 AGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPS--------------MIGYGM  144 (235)
T ss_dssp             CCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT--------------BHHHHH
T ss_pred             CcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCccc--------------ccchHH
Confidence            996321   111    234578999999999999887762 1247999999766544332              367999


Q ss_pred             HHHHHHHHHHHHhh------cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHH
Q 019878          145 SKAVADKIALQAAS------EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGH  218 (334)
Q Consensus       145 sK~~~E~~~~~~~~------~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  218 (334)
                      +|.+.+.+.+.+..      .++++..+.|+.+-.+           +.......         .....|+..+|+++.+
T Consensus       145 sKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~-----------~~~~~~~~---------~~~~~~~~~~~va~~~  204 (235)
T d1ooea_         145 AKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP-----------MNRKWMPN---------ADHSSWTPLSFISEHL  204 (235)
T ss_dssp             HHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH-----------HHHHHSTT---------CCGGGCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCc-----------chhhhCcC---------CccccCCCHHHHHHHH
Confidence            99999999988752      3667888899987432           12222211         1233578899999998


Q ss_pred             HHHhhcC----CCCCeEEe
Q 019878          219 IAAMEKG----RSGERYLL  233 (334)
Q Consensus       219 ~~~~~~~----~~g~~~~i  233 (334)
                      +..+..+    ..|....+
T Consensus       205 ~~~l~~~~~~~~tG~~i~v  223 (235)
T d1ooea_         205 LKWTTETSSRPSSGALLKI  223 (235)
T ss_dssp             HHHHHCGGGCCCTTCEEEE
T ss_pred             HHHhcCccccCCCceEEEE
Confidence            7655432    35777777

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.65  E-value=2.2e-15  Score=125.16  Aligned_cols=203  Identities=25%  Similarity=0.193  Sum_probs=139.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc------CCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF------GCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~------~~d~vih~a~   74 (334)
                      .++|||||++.||.++++.|+++|++|++++|+++..       +....++|+.+......+..      ..+.+++.++
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~-------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGE-------DLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAG   74 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSS-------SSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccc-------cceEeeccccchhhhHHHHHhhhccccccchhhhhh
Confidence            3689999999999999999999999999999987643       46778899998876655543      2455566555


Q ss_pred             ccCC----------CCCCcccchhhhhHHHHHHHHHHHhc---------CCCcEEEEecccceeccCCCccCCCCCcccc
Q 019878           75 LVEP----------WLPDPSRFFAVNVEGLKNVVQAAKET---------KTVEKIIYTSSFFALGSTDGYIADENQVHEE  135 (334)
Q Consensus        75 ~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~  135 (334)
                      ....          ..+.+...++.|+.+...+...+...         .+-.++|++||...+.+.+.           
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~-----------  143 (241)
T d1uaya_          75 VGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIG-----------  143 (241)
T ss_dssp             CCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTT-----------
T ss_pred             ccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCC-----------
Confidence            4111          01123457789999988888777543         12348999999876644332           


Q ss_pred             ccccChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeH
Q 019878          136 KYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHV  211 (334)
Q Consensus       136 ~~~~~~Y~~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  211 (334)
                         ...|+.+|.+.+.+.+.+    .++|+++..+.||.+-.+....   .............++ . +      -+...
T Consensus       144 ---~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~---~~~~~~~~~~~~~~~-~-~------R~g~p  209 (241)
T d1uaya_         144 ---QAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG---LPEKAKASLAAQVPF-P-P------RLGRP  209 (241)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT---SCHHHHHHHHTTCCS-S-C------SCCCH
T ss_pred             ---chhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccch---hhhhHHHHHHhcCCC-C-C------CCcCH
Confidence               267999999887777654    4679999999999996542111   111222222222221 1 1      24569


Q ss_pred             HHHHHHHHHHhhcCC-CCCeEEecC
Q 019878          212 DDVVDGHIAAMEKGR-SGERYLLTG  235 (334)
Q Consensus       212 ~D~a~a~~~~~~~~~-~g~~~~i~g  235 (334)
                      +|+|+++..++.... +|+++.+.|
T Consensus       210 edvA~~v~fL~s~~~iTG~~i~VDG  234 (241)
T d1uaya_         210 EEYAALVLHILENPMLNGEVVRLDG  234 (241)
T ss_dssp             HHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred             HHHHHHHHHHHhCCCCCCCEEEECC
Confidence            999999999987543 689999954

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=1.2e-16  Score=135.53  Aligned_cols=174  Identities=14%  Similarity=0.145  Sum_probs=119.9

Q ss_pred             CcE-EEEcCCChhhHHHHHHHHhC-CCeEEEEEcCCCCCCC----CC-CCCCeEEEEcCCCChhhHHHHhc-------CC
Q 019878            1 MKI-LVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISG----LP-SEGALELVYGDVTDYRSLVDACF-------GC   66 (334)
Q Consensus         1 m~i-lItG~tG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~----~~-~~~~v~~~~~Dl~d~~~~~~~~~-------~~   66 (334)
                      |+| |||||++.||.++++.|+++ |++|++.+|+.++.+.    +. ...++.++.+|++|.+++.++++       .+
T Consensus         3 ~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~i   82 (275)
T d1wmaa1           3 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGL   82 (275)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             CeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence            565 89999999999999999985 8999999998764321    11 11368999999999998876653       48


Q ss_pred             CEEEEeccccCCC--C----CCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEecccceeccCCC-cc----------C-
Q 019878           67 HVIFHTAALVEPW--L----PDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDG-YI----------A-  127 (334)
Q Consensus        67 d~vih~a~~~~~~--~----~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~Ss~~v~~~~~~-~~----------~-  127 (334)
                      |++||+||.....  .    ++++..+++|+.++..+++.+..... -.++|++||......... .+          . 
T Consensus        83 DiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~~  162 (275)
T d1wmaa1          83 DVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETIT  162 (275)
T ss_dssp             EEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCC
T ss_pred             EEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhcccccc
Confidence            9999999985331  1    12345789999999999999987521 137999999755321110 00          0 


Q ss_pred             ---------------CCCCccccccccChHHHHHHHHHHHHHH----Hhh----cCCCEEEEecCceecC
Q 019878          128 ---------------DENQVHEEKYFCTQYERSKAVADKIALQ----AAS----EGLPIVPVYPGVIYGP  174 (334)
Q Consensus       128 ---------------~e~~~~~~~~~~~~Y~~sK~~~E~~~~~----~~~----~g~~~~ilR~~~v~G~  174 (334)
                                     .......+..+...|+.||.....+.+.    +.+    .|+.+..+.||.|-.+
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~  232 (275)
T d1wmaa1         163 EEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTD  232 (275)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCST
T ss_pred             hhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCC
Confidence                           0000011112246799999977665543    332    3899999999998654

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.59  E-value=3.2e-15  Score=125.50  Aligned_cols=211  Identities=14%  Similarity=0.076  Sum_probs=142.2

Q ss_pred             CcEEEEcCCC--hhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CCCCCeEEEEcCCCChhhHHHHhc-------CCC
Q 019878            1 MKILVSGASG--YLGGRLCHALLKQGHSVRALVRRTSDISGL----PSEGALELVYGDVTDYRSLVDACF-------GCH   67 (334)
Q Consensus         1 m~ilItG~tG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~v~~~~~Dl~d~~~~~~~~~-------~~d   67 (334)
                      +++|||||+|  .||.++++.|+++|++|++.+|+++....+    ........+..|+.+..+....+.       ..|
T Consensus         6 K~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d   85 (258)
T d1qsga_           6 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFD   85 (258)
T ss_dssp             CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSEE
T ss_pred             CEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcccccc
Confidence            3699999999  799999999999999999999986532211    111356788889999877666553       379


Q ss_pred             EEEEeccccCCCC-----------CCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEecccceeccCCCccCCCCCcccc
Q 019878           68 VIFHTAALVEPWL-----------PDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTSSFFALGSTDGYIADENQVHEE  135 (334)
Q Consensus        68 ~vih~a~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~  135 (334)
                      ++||+|+......           +.....+..|+.+...+++++..... -+.+|++||.....+.+.           
T Consensus        86 ~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~-----------  154 (258)
T d1qsga_          86 GFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPN-----------  154 (258)
T ss_dssp             EEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT-----------
T ss_pred             eEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCC-----------
Confidence            9999998632211           11233567888888888888876532 235888888654332221           


Q ss_pred             ccccChHHHHHHHHHHHHHHHh----hcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeH
Q 019878          136 KYFCTQYERSKAVADKIALQAA----SEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHV  211 (334)
Q Consensus       136 ~~~~~~Y~~sK~~~E~~~~~~~----~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  211 (334)
                         ...|+.+|.+.+.+.+.+.    ++|+++..++||.|..+...... .......... ...|        ..-+...
T Consensus       155 ---~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~-~~~~~~~~~~-~~~p--------l~R~~~p  221 (258)
T d1qsga_         155 ---YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK-DFRKMLAHCE-AVTP--------IRRTVTI  221 (258)
T ss_dssp             ---TTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGST-THHHHHHHHH-HHST--------TSSCCCH
T ss_pred             ---cHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccc-hhhhHHHHHH-hCCC--------CCCCcCH
Confidence               2669999998888777654    56899999999999876432111 1111122222 1111        1125669


Q ss_pred             HHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          212 DDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       212 ~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      +|++.++..++...   -+|+++.+.|
T Consensus       222 eeia~~v~fL~s~~s~~itG~~i~vDG  248 (258)
T d1qsga_         222 EDVGNSAAFLCSDLSAGISGEVVHVDG  248 (258)
T ss_dssp             HHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHHhCchhcCccCceEEECc
Confidence            99999999998643   3689999964

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.57  E-value=7.4e-14  Score=118.64  Aligned_cols=209  Identities=17%  Similarity=0.108  Sum_probs=133.4

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC-CC-----------------------CCCCCCeEEEEcCCCChhh
Q 019878            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI-SG-----------------------LPSEGALELVYGDVTDYRS   58 (334)
Q Consensus         3 ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~-----------------------~~~~~~v~~~~~Dl~d~~~   58 (334)
                      +|||||++.||.++++.|+++|++|++.+++.... +.                       ......+..+.+|+++.++
T Consensus         5 AlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~~   84 (284)
T d1e7wa_           5 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFTR   84 (284)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHHH
T ss_pred             EEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCHHH
Confidence            68999999999999999999999999988754210 00                       0000134456677888888


Q ss_pred             HHHHhc-------CCCEEEEeccccCCC------CCCcc--------------cchhhhhHHHHHHHHHHHhc-------
Q 019878           59 LVDACF-------GCHVIFHTAALVEPW------LPDPS--------------RFFAVNVEGLKNVVQAAKET-------  104 (334)
Q Consensus        59 ~~~~~~-------~~d~vih~a~~~~~~------~~~~~--------------~~~~~n~~~~~~l~~~~~~~-------  104 (334)
                      +.++++       ++|++||+||.....      ..+++              ..+.+|+.++..+.+++.+.       
T Consensus        85 v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~  164 (284)
T d1e7wa_          85 CAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAK  164 (284)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGG
T ss_pred             HHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhHHH
Confidence            777653       589999999974321      11111              25688999998888876542       


Q ss_pred             --CCCcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCC
Q 019878          105 --KTVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLT  178 (334)
Q Consensus       105 --~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~  178 (334)
                        +...++|.+||.....+..+              ...|+.+|...+.+.+.+    .++|+++..+.||.+-....  
T Consensus       165 ~~~~~~~ii~~~s~~~~~~~~~--------------~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~--  228 (284)
T d1e7wa_         165 HRGTNYSIINMVDAMTNQPLLG--------------YTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDD--  228 (284)
T ss_dssp             GSCSCEEEEEECCTTTTSCCTT--------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGG--
T ss_pred             hcCCCCcccccccccccCCccc--------------eeeeccccccchhhhHHHHHHhCCcccccccccccccccccc--
Confidence              12346777777654433222              266999999888777664    46699999999996432211  


Q ss_pred             chhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcC---CCCCeEEec-CCCC
Q 019878          179 TGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG---RSGERYLLT-GENA  238 (334)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~---~~g~~~~i~-g~~~  238 (334)
                         .............++  .      .-+...+|+++++..++...   -+|+++.+. |-.+
T Consensus       229 ---~~~~~~~~~~~~~pl--~------~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl  281 (284)
T d1e7wa_         229 ---MPPAVWEGHRSKVPL--Y------QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  281 (284)
T ss_dssp             ---SCHHHHHHHHTTCTT--T------TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ---CCHHHHHHHHhcCCC--C------CCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhc
Confidence               112233333333221  1      12456999999999998643   368999995 4433

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=1.8e-15  Score=127.62  Aligned_cols=190  Identities=16%  Similarity=0.110  Sum_probs=132.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC------CCCCeEEEEcCCCChhhHHHHh-------cCCCE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP------SEGALELVYGDVTDYRSLVDAC-------FGCHV   68 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~~v~~~~~Dl~d~~~~~~~~-------~~~d~   68 (334)
                      ++|||||++.||.++++.|+++|++|++++|+.++.+.+.      ....+..+.+|+.+.+......       ...|+
T Consensus        16 ~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~   95 (269)
T d1xu9a_          16 KVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDM   95 (269)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCSE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhCCccc
Confidence            5999999999999999999999999999999876433211      1135788899999887765544       35899


Q ss_pred             EEEeccccCC------CCCCcccchhhhhHHHHHHHHHHHhcC--CCcEEEEecccceeccCCCccCCCCCccccccccC
Q 019878           69 IFHTAALVEP------WLPDPSRFFAVNVEGLKNVVQAAKETK--TVEKIIYTSSFFALGSTDGYIADENQVHEEKYFCT  140 (334)
Q Consensus        69 vih~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~  140 (334)
                      ++|+|+....      ..++....+++|+.++..+.+.+....  +-.++|++||...+-+.+.              ..
T Consensus        96 li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~p~--------------~~  161 (269)
T d1xu9a_          96 LILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPM--------------VA  161 (269)
T ss_dssp             EEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTT--------------CH
T ss_pred             cccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCCCC--------------ch
Confidence            9999987332      112344578999999998888876431  1248999998765533322              36


Q ss_pred             hHHHHHHHHHHHHHHHh----h--cCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHHHH
Q 019878          141 QYERSKAVADKIALQAA----S--EGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDV  214 (334)
Q Consensus       141 ~Y~~sK~~~E~~~~~~~----~--~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  214 (334)
                      .|+.||++.+.+.+.+.    .  .|+++..+.||.|-.+           +..+...+.         ........+++
T Consensus       162 ~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~-----------~~~~~~~~~---------~~~~~~~~e~~  221 (269)
T d1xu9a_         162 AYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE-----------TAMKAVSGI---------VHMQAAPKEEC  221 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH-----------HHHHHSCGG---------GGGGCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCc-----------HHHHhccCC---------ccccCCCHHHH
Confidence            79999998887776653    2  3588889999988432           122222111         11234557899


Q ss_pred             HHHHHHHhhcC
Q 019878          215 VDGHIAAMEKG  225 (334)
Q Consensus       215 a~a~~~~~~~~  225 (334)
                      ++.+...+...
T Consensus       222 a~~i~~~~~~~  232 (269)
T d1xu9a_         222 ALEIIKGGALR  232 (269)
T ss_dssp             HHHHHHHHHTT
T ss_pred             HHHHHHHhhcC
Confidence            99888877654

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.54  E-value=4.3e-14  Score=119.10  Aligned_cols=211  Identities=15%  Similarity=0.118  Sum_probs=133.3

Q ss_pred             cEEEEcCCC--hhhHHHHHHHHhCCCeEEEEEcCCCCC-----CCCCCCCCeEEEEcCCCChhhHHHHh----------c
Q 019878            2 KILVSGASG--YLGGRLCHALLKQGHSVRALVRRTSDI-----SGLPSEGALELVYGDVTDYRSLVDAC----------F   64 (334)
Q Consensus         2 ~ilItG~tG--~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~~~v~~~~~Dl~d~~~~~~~~----------~   64 (334)
                      ++|||||+|  .||.++++.|+++|++|++.+|+..+.     +.+.  .+...+++|+.+.++...++          .
T Consensus         8 ~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~--~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~~   85 (268)
T d2h7ma1           8 RILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLP--AKAPLLELDVQNEEHLASLAGRVTEAIGAGN   85 (268)
T ss_dssp             EEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSS--SCCCEEECCTTCHHHHHHHHHHHHHHHCTTC
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcC--CceeeEeeecccccccccccchhhhccccCC
Confidence            699999765  599999999999999999999876532     1222  25788999999987655443          2


Q ss_pred             CCCEEEEeccccCCC---C--------CCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceeccCCCccCCCCCcc
Q 019878           65 GCHVIFHTAALVEPW---L--------PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGSTDGYIADENQVH  133 (334)
Q Consensus        65 ~~d~vih~a~~~~~~---~--------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~e~~~~  133 (334)
                      ..|+++|+|+.....   .        .+....+..|+.........+.....-...+.++|.......+.         
T Consensus        86 ~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~p~---------  156 (268)
T d2h7ma1          86 KLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPA---------  156 (268)
T ss_dssp             CEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCTT---------
T ss_pred             CcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccCcc---------
Confidence            379999999963211   0        11222456666677767776665533334555544433332221         


Q ss_pred             ccccccChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCC--------CCCchhHHHHHHHHHHcCCCCccccC
Q 019878          134 EEKYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPG--------KLTTGNLVAKLMIERFNGRLPGYIGY  201 (334)
Q Consensus       134 ~~~~~~~~Y~~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (334)
                           ...|+.+|.+.+.+.+.+    .++|+++..+.||.+-.+.        ...........+........|.    
T Consensus       157 -----~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl----  227 (268)
T d2h7ma1         157 -----YNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPI----  227 (268)
T ss_dssp             -----THHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTT----
T ss_pred             -----cchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCC----
Confidence                 366999999888877764    4568999999999886531        1000011112222222222221    


Q ss_pred             CCCceeeeeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          202 GNDRFSFCHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       202 ~~~~~~~i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                         .+.+..++|+++++..++...   -+|+++.+.|
T Consensus       228 ---~rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDG  261 (268)
T d2h7ma1         228 ---GWNMKDATPVAKTVCALLSDWLPATTGDIIYADG  261 (268)
T ss_dssp             ---CCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEEST
T ss_pred             ---CCCCCCHHHHHHHHHHHhCchhcCccCCEEEECc
Confidence               122455899999999998643   2688888853

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.52  E-value=4.5e-14  Score=119.40  Aligned_cols=211  Identities=11%  Similarity=0.027  Sum_probs=132.6

Q ss_pred             CcEEEEcCCC--hhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC----CCCCeEEEEcCCCChhhHHHHh-------cCCC
Q 019878            1 MKILVSGASG--YLGGRLCHALLKQGHSVRALVRRTSDISGLP----SEGALELVYGDVTDYRSLVDAC-------FGCH   67 (334)
Q Consensus         1 m~ilItG~tG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~v~~~~~Dl~d~~~~~~~~-------~~~d   67 (334)
                      +++|||||+|  .||.++++.|+++|++|++++|+++..+.+.    ......++.+|+++.+...+++       ..+|
T Consensus         6 K~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~id   85 (274)
T d2pd4a1           6 KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSLD   85 (274)
T ss_dssp             CEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCEE
T ss_pred             CEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCCCC
Confidence            3699999987  6999999999999999999999854221111    1135678899999988876665       3589


Q ss_pred             EEEEeccccCC--CCC----Cc-cc---chhhhhHHHHHHHHHHHhcCCCcE-EEEecccceeccCCCccCCCCCccccc
Q 019878           68 VIFHTAALVEP--WLP----DP-SR---FFAVNVEGLKNVVQAAKETKTVEK-IIYTSSFFALGSTDGYIADENQVHEEK  136 (334)
Q Consensus        68 ~vih~a~~~~~--~~~----~~-~~---~~~~n~~~~~~l~~~~~~~~~~~~-~v~~Ss~~v~~~~~~~~~~e~~~~~~~  136 (334)
                      ++||+++....  ...    .. ..   ....+..+...+.....+..+-.. ++.+|+.........            
T Consensus        86 ~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~------------  153 (274)
T d2pd4a1          86 FIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAH------------  153 (274)
T ss_dssp             EEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT------------
T ss_pred             eEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccccccc------------
Confidence            99999997322  111    11 11   222333344444554444322223 555555444433221            


Q ss_pred             cccChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCCCCccccCCCCceeeeeHH
Q 019878          137 YFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGRLPGYIGYGNDRFSFCHVD  212 (334)
Q Consensus       137 ~~~~~Y~~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  212 (334)
                        ...|+.+|...+.+.+..    .++|+++..+.|+.+..+....... ............+.         .-+...+
T Consensus       154 --~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~-~~~~~~~~~~~~p~---------~r~~~pe  221 (274)
T d2pd4a1         154 --YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIAD-FRMILKWNEINAPL---------RKNVSLE  221 (274)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTT-HHHHHHHHHHHSTT---------SSCCCHH
T ss_pred             --chhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCc-hHHHHHHHhhhhhc---------cCCcCHH
Confidence              266999999888877654    4579999999999998764321111 01111111111111         2356799


Q ss_pred             HHHHHHHHHhhcC---CCCCeEEecC
Q 019878          213 DVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       213 D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      |+|.++..++...   -+|+++.+.|
T Consensus       222 dIA~~v~fL~S~~s~~itG~~i~vDG  247 (274)
T d2pd4a1         222 EVGNAGMYLLSSLSSGVSGEVHFVDA  247 (274)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             HHHHHHHHHhChhhCCCcCceEEECC
Confidence            9999999998753   3699999964

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.47  E-value=1.9e-12  Score=108.69  Aligned_cols=207  Identities=18%  Similarity=0.228  Sum_probs=129.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC-CC------CCCCCeEEEEcCCCChh----hHHHH-------h
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-GL------PSEGALELVYGDVTDYR----SLVDA-------C   63 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~------~~~~~v~~~~~Dl~d~~----~~~~~-------~   63 (334)
                      ..|||||++.||.++++.|+++|++|++++|+.++.. .+      .....+..+..|..+..    .+.++       +
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   82 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence            3699999999999999999999999999999865321 00      00125666766665432    22222       2


Q ss_pred             cCCCEEEEeccccCCCC------C-----------CcccchhhhhHHHHHHHHHHHhcC--------CCcEEEEecccce
Q 019878           64 FGCHVIFHTAALVEPWL------P-----------DPSRFFAVNVEGLKNVVQAAKETK--------TVEKIIYTSSFFA  118 (334)
Q Consensus        64 ~~~d~vih~a~~~~~~~------~-----------~~~~~~~~n~~~~~~l~~~~~~~~--------~~~~~v~~Ss~~v  118 (334)
                      ..+|++||+||...+..      .           .....+..|+.+............        ....++.+|+...
T Consensus        83 g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (266)
T d1mxha_          83 GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT  162 (266)
T ss_dssp             SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGG
T ss_pred             CCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhccc
Confidence            35999999999743210      0           011234455555555555554432        1234555665544


Q ss_pred             eccCCCccCCCCCccccccccChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCchhHHHHHHHHHHcCC
Q 019878          119 LGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIERFNGR  194 (334)
Q Consensus       119 ~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~  194 (334)
                      ....+.              ...|+.||...+.+.+.+    .++|+++..+.||.+..+...+ .    .......+ .
T Consensus       163 ~~~~~~--------------~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~-~----~~~~~~~~-~  222 (266)
T d1mxha_         163 DLPLPG--------------FCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP-Q----ETQEEYRR-K  222 (266)
T ss_dssp             GSCCTT--------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC-H----HHHHHHHT-T
T ss_pred             cccCcc--------------hhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC-H----HHHHHHHh-c
Confidence            332222              367999999888777664    4569999999999987664322 1    22222222 2


Q ss_pred             CCccccCCCCceeeeeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          195 LPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       195 ~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      .+  .+     +-+...+|++.++..++...   -+|+++.+.|
T Consensus       223 ~p--l~-----r~~~~peeva~~v~fL~s~~s~~itG~~i~vDG  259 (266)
T d1mxha_         223 VP--LG-----QSEASAAQIADAIAFLVSKDAGYITGTTLKVDG  259 (266)
T ss_dssp             CT--TT-----SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             CC--CC-----CCCCCHHHHHHHHHHHhCchhCCccCCeEEECc
Confidence            22  11     12356999999999999753   3799999954

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.46  E-value=2.1e-12  Score=107.84  Aligned_cols=213  Identities=16%  Similarity=0.095  Sum_probs=123.4

Q ss_pred             Cc-EEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHh--------cCCCEEEE
Q 019878            1 MK-ILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC--------FGCHVIFH   71 (334)
Q Consensus         1 m~-ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~--------~~~d~vih   71 (334)
                      || ||||||++.||.++++.|+++|++|++++|+..+            ...|+.+.+......        ...|+++|
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~------------~~~d~~~~~~~~~~~~~~~~~~~~~id~lv~   68 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE------------VIADLSTAEGRKQAIADVLAKCSKGMDGLVL   68 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS------------EECCTTSHHHHHHHHHHHHTTCTTCCSEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH------------HHHHhcCHHHHHHHHHHHHHHhCCCCcEEEE
Confidence            77 6999999999999999999999999999997643            234777665544332        23899999


Q ss_pred             eccccCCCCCCcccchhhhhHHHHHHHHHHHhc---CCCcEEEEecccceeccCC-CccCC---C-C---------Cccc
Q 019878           72 TAALVEPWLPDPSRFFAVNVEGLKNVVQAAKET---KTVEKIIYTSSFFALGSTD-GYIAD---E-N---------QVHE  134 (334)
Q Consensus        72 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~-~~~~~---e-~---------~~~~  134 (334)
                      +|+.... ..........|..+...+.+.....   ........+++........ ..+..   . .         ....
T Consensus        69 ~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~~~~  147 (257)
T d1fjha_          69 CAGLGPQ-TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAG  147 (257)
T ss_dssp             CCCCCTT-CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCC
T ss_pred             cCCCCCc-HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehhccC
Confidence            9986432 2333455667777777666654332   1233455555432221110 00000   0 0         0000


Q ss_pred             cccccChHHHHHHHHHHHHHHH----hhcCCCEEEEecCceecCCCCCchhHHHHHHHHH-HcCCCCccccCCCCceeee
Q 019878          135 EKYFCTQYERSKAVADKIALQA----ASEGLPIVPVYPGVIYGPGKLTTGNLVAKLMIER-FNGRLPGYIGYGNDRFSFC  209 (334)
Q Consensus       135 ~~~~~~~Y~~sK~~~E~~~~~~----~~~g~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i  209 (334)
                      .......|+.+|.+.+.+.+.+    .++|+++..+.||.+-.+.....  +-....... .+...        ...-+.
T Consensus       148 ~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~--~~~~~~~~~~~~~~~--------PlgR~g  217 (257)
T d1fjha_         148 EQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAG--LQDPRYGESIAKFVP--------PMGRRA  217 (257)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------------CCC--------STTSCC
T ss_pred             CCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhh--cCCHHHHHHHHhcCC--------CCCCCc
Confidence            1111346999999888877764    46799999999999976532110  000111111 11111        111256


Q ss_pred             eHHHHHHHHHHHhhcC---CCCCeEEecCC
Q 019878          210 HVDDVVDGHIAAMEKG---RSGERYLLTGE  236 (334)
Q Consensus       210 ~v~D~a~a~~~~~~~~---~~g~~~~i~g~  236 (334)
                      ..+|+++++..++...   -+|+++.+.|.
T Consensus       218 ~p~eva~~v~fL~S~~s~~itG~~i~vDGG  247 (257)
T d1fjha_         218 EPSEMASVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             CTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHhCchhCCccCceEEeCCC
Confidence            7999999999998643   36889998643

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.41  E-value=5.1e-12  Score=107.79  Aligned_cols=211  Identities=9%  Similarity=0.052  Sum_probs=129.4

Q ss_pred             cEEEEcCCC--hhhHHHHHHHHhCCCeEEEEEcCCC-----------CC--CCC-C--CCCCe-EEEEcC--CC------
Q 019878            2 KILVSGASG--YLGGRLCHALLKQGHSVRALVRRTS-----------DI--SGL-P--SEGAL-ELVYGD--VT------   54 (334)
Q Consensus         2 ~ilItG~tG--~iG~~l~~~L~~~g~~V~~~~r~~~-----------~~--~~~-~--~~~~v-~~~~~D--l~------   54 (334)
                      ++|||||+|  .||.++++.|+++|.+|++.+|++.           ..  ... .  ..... ....+|  +.      
T Consensus        10 ~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (297)
T d1d7oa_          10 RAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPEDVP   89 (297)
T ss_dssp             EEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGGGSC
T ss_pred             EEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccccccch
Confidence            599999987  8999999999999999999988531           00  000 0  00011 122222  21      


Q ss_pred             ---------------ChhhH----HHHhcCCCEEEEeccccCC--------CCCCcccchhhhhHHHHHHHHHHHhcCCC
Q 019878           55 ---------------DYRSL----VDACFGCHVIFHTAALVEP--------WLPDPSRFFAVNVEGLKNVVQAAKETKTV  107 (334)
Q Consensus        55 ---------------d~~~~----~~~~~~~d~vih~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~  107 (334)
                                     +...+    .+.+.++|++||+||....        ..+++...+++|+.+...+++++......
T Consensus        90 ~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~  169 (297)
T d1d7oa_          90 EDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNP  169 (297)
T ss_dssp             HHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE
T ss_pred             hhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHHhhc
Confidence                           11222    2223468999999986321        11234567889999999999998876321


Q ss_pred             -cEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHH----Hh-hcCCCEEEEecCceecCCCCCchh
Q 019878          108 -EKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQ----AA-SEGLPIVPVYPGVIYGPGKLTTGN  181 (334)
Q Consensus       108 -~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~----~~-~~g~~~~ilR~~~v~G~~~~~~~~  181 (334)
                       .+.+.+++.+.......             ....|..+|...+.+.+.    +. ++|+++..+.||.+..+..... .
T Consensus       170 ~g~~~~~~~~~~~~~~~~-------------~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~-~  235 (297)
T d1d7oa_         170 GGASISLTYIASERIIPG-------------YGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI-G  235 (297)
T ss_dssp             EEEEEEEECGGGTSCCTT-------------CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC-S
T ss_pred             CCcceeeeehhhcccccc-------------cccceecccccccccccccchhccccceEEecccccccccchhhhhc-c
Confidence             13455555433221110             125699999877766554    33 4699999999999987754321 1


Q ss_pred             HHHHHHHHHHcCCCCccccCCCCceeeeeHHHHHHHHHHHhhcC---CCCCeEEecC
Q 019878          182 LVAKLMIERFNGRLPGYIGYGNDRFSFCHVDDVVDGHIAAMEKG---RSGERYLLTG  235 (334)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~---~~g~~~~i~g  235 (334)
                      ....+........+.         ..+...+|++.+++.++...   -+|+++.+.|
T Consensus       236 ~~~~~~~~~~~~~Pl---------gR~~~peevA~~v~fL~S~~a~~itGq~i~vDG  283 (297)
T d1d7oa_         236 FIDTMIEYSYNNAPI---------QKTLTADEVGNAAAFLVSPLASAITGATIYVDN  283 (297)
T ss_dssp             HHHHHHHHHHHHSSS---------CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             CCHHHHHHHHhCCCC---------CCCCCHHHHHHHHHHHhCchhcCCcCceEEECc
Confidence            222333333222221         12556999999999998643   3789999854

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.29  E-value=3.2e-11  Score=104.15  Aligned_cols=158  Identities=10%  Similarity=0.034  Sum_probs=104.8

Q ss_pred             cEEEEc--CCChhhHHHHHHHHhCCCeEEEEEcCCCC-----------CC------CCCCCCCeEEEEc-----------
Q 019878            2 KILVSG--ASGYLGGRLCHALLKQGHSVRALVRRTSD-----------IS------GLPSEGALELVYG-----------   51 (334)
Q Consensus         2 ~ilItG--~tG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------~~------~~~~~~~v~~~~~-----------   51 (334)
                      ..||||  ++..||.++++.|+++|.+|++..++...           ..      ............+           
T Consensus         4 VAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (329)
T d1uh5a_           4 ICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDID   83 (329)
T ss_dssp             EEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGGCC
T ss_pred             EEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcccc
Confidence            379999  45689999999999999999998764320           00      0000011233333           


Q ss_pred             ---------CCCChhhHHHH-------hcCCCEEEEeccccCC--------CCCCcccchhhhhHHHHHHHHHHHhcC-C
Q 019878           52 ---------DVTDYRSLVDA-------CFGCHVIFHTAALVEP--------WLPDPSRFFAVNVEGLKNVVQAAKETK-T  106 (334)
Q Consensus        52 ---------Dl~d~~~~~~~-------~~~~d~vih~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~  106 (334)
                               |+.+.+.+.++       +.++|++||+||....        ..+++...+++|+.++..+++++.++. .
T Consensus        84 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~  163 (329)
T d1uh5a_          84 EETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKP  163 (329)
T ss_dssp             HHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE
T ss_pred             hhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhccc
Confidence                     33343333333       3469999999986322        122455688999999999999988762 1


Q ss_pred             CcEEEEecccceeccCCCccCCCCCccccccccChHHHHHHHHHHHHHHH----hh-cCCCEEEEecCcee
Q 019878          107 VEKIIYTSSFFALGSTDGYIADENQVHEEKYFCTQYERSKAVADKIALQA----AS-EGLPIVPVYPGVIY  172 (334)
Q Consensus       107 ~~~~v~~Ss~~v~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~~----~~-~g~~~~ilR~~~v~  172 (334)
                      -.++|.+||.......+.             +.+.|+.+|...+.+.+.+    .+ +|+++..+.||.+-
T Consensus       164 ~GsIv~iss~~~~~~~p~-------------y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~  221 (329)
T d1uh5a_         164 QSSIISLTYHASQKVVPG-------------YGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLK  221 (329)
T ss_dssp             EEEEEEEECGGGTSCCTT-------------CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred             ccccccceeehhcccccc-------------cchhhhhhhccccccchhhHHHHhcccCcEEEEEecCccc
Confidence            247888888655433221             1256999999888777764    34 59999999999874

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.10  E-value=3.5e-12  Score=101.43  Aligned_cols=74  Identities=22%  Similarity=0.280  Sum_probs=63.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCC----CCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLP----SEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      +|+||||+|.||..+++.|+++|++|++++|+.++...+.    ....+....+|+.|.+++.+.+.++|+|||+||.
T Consensus        25 ~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDilin~Ag~  102 (191)
T d1luaa1          25 KAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAGAI  102 (191)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECCCT
T ss_pred             EEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeeeecCcc
Confidence            6999999999999999999999999999999876533211    1124567889999999999999999999999986

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.74  E-value=6.1e-09  Score=77.01  Aligned_cols=72  Identities=22%  Similarity=0.312  Sum_probs=60.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHH-hcCCCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vih~a   73 (334)
                      |+|+|.|+ |.+|+++++.|.+.|++|++++.+++....+....+..++.||.+|++.+.++ ++++|+++-+.
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t   73 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVT   73 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhcccC
Confidence            99999996 99999999999999999999999887544332222678999999999999888 46799888654

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.55  E-value=5.1e-08  Score=72.59  Aligned_cols=112  Identities=20%  Similarity=0.127  Sum_probs=79.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCCC--CCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccC
Q 019878            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG--LPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVE   77 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~--~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~   77 (334)
                      ||.|+||+|.+|++++..|..+|  .+++.++..+.+...  +.......... .........+.++++|+||.+||...
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~-~~~~~~~~~~~~~~aDivVitag~~~   80 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVK-GYLGPEQLPDCLKGCDVVVIPAGVPR   80 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEE-EEESGGGHHHHHTTCSEEEECCSCCC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCC-eEEcCCChHHHhCCCCEEEECCCcCC
Confidence            79999999999999999999887  578888876532110  11000011111 11234556778899999999999755


Q ss_pred             CCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      .........++.|....+.+++.+.++..-..++.+|
T Consensus        81 ~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt  117 (144)
T d1mlda1          81 KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (144)
T ss_dssp             CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            5445667889999999999999999995444566666

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.42  E-value=7.9e-07  Score=66.00  Aligned_cols=109  Identities=25%  Similarity=0.212  Sum_probs=76.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHh-C--CCeEEEEEcCCCCC------CCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLK-Q--GHSVRALVRRTSDI------SGLPSEGALELVYGDVTDYRSLVDACFGCHVIFH   71 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~-~--g~~V~~~~r~~~~~------~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih   71 (334)
                      |||.|+|++|.+|++++-.|.. .  ..++..++..+...      .+.........+ .+-.+    .+.+++.|+||.
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~-~~~~~----~~~~~~aDvvvi   75 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF-SGEDA----TPALEGADVVLI   75 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEE-CSSCC----HHHHTTCSEEEE
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEE-EcCCC----ccccCCCCEEEE
Confidence            9999999999999999988764 3  47899988754210      011111122222 11122    336789999999


Q ss_pred             eccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           72 TAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        72 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      +||............+..|....+.+.+.+.++..-..++.+|
T Consensus        76 taG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvt  118 (145)
T d2cmda1          76 SAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (145)
T ss_dssp             CCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCCccCCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEcc
Confidence            9998655445667889999999999999999985444567666

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.40  E-value=9.7e-07  Score=65.50  Aligned_cols=109  Identities=16%  Similarity=0.116  Sum_probs=76.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCC--CC-------C--CCCCCCeEEEEcCCCChhhHHHHhcCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSD--IS-------G--LPSEGALELVYGDVTDYRSLVDACFGCH   67 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~--~~-------~--~~~~~~v~~~~~Dl~d~~~~~~~~~~~d   67 (334)
                      |||.|+||+|.+|+.++..|..++  .++..+++.++.  ..       +  .....+++.....-.|    .+.++++|
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d----~~~l~~aD   76 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDEN----LRIIDESD   76 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTC----GGGGTTCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcch----HHHhccce
Confidence            999999999999999999999888  589999887531  00       0  0001123322111112    24667899


Q ss_pred             EEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           68 VIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        68 ~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      +||-+||............+..|..-.+.+++...++. -+.++.+|
T Consensus        77 vVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~~-~~~iivVt  122 (145)
T d1hyea1          77 VVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVIT  122 (145)
T ss_dssp             EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECS
T ss_pred             EEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhccC-CCeEEEEc
Confidence            99999997554444566788999999999999999984 34555443

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.27  E-value=4e-07  Score=67.81  Aligned_cols=106  Identities=13%  Similarity=0.178  Sum_probs=70.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCC-------C-CCCCCCeEEEEcCCCChhhHHHHhcCCCEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDIS-------G-LPSEGALELVYGDVTDYRSLVDACFGCHVIF   70 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~-------~-~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   70 (334)
                      |||.|.| +|++|+.++..|+.+|  .+++++++.+++..       . .........+.+|+       +.+.++|+||
T Consensus         6 ~KI~IIG-aG~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~-------~~~~~adivv   77 (146)
T d1ez4a1           6 QKVVLVG-DGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY-------SDCKDADLVV   77 (146)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG-------GGGTTCSEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH-------HHhccccEEE
Confidence            7899999 5999999999999877  68999998764211       0 00011334455553       2457899999


Q ss_pred             EeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        71 h~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      .+||............+..|+...+.+++.+.++..-..++.+|
T Consensus        78 itag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          78 ITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             ECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EecccccCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence            99997554445566788999999999999999984333455555

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=98.20  E-value=1.1e-06  Score=65.21  Aligned_cols=107  Identities=20%  Similarity=0.124  Sum_probs=75.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCCC----CCC-----CCCeEEEEcCCCChhhHHHHhcCCCEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG----LPS-----EGALELVYGDVTDYRSLVDACFGCHVI   69 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~----~~~-----~~~v~~~~~Dl~d~~~~~~~~~~~d~v   69 (334)
                      |||.|+|+ |.+|+.++..|+.++  .++..+++++.....    +..     ....++...  .|    .+.++++|+|
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~----~~~~~dadvv   73 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--ND----YADTANSDIV   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SC----GGGGTTCSEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CC----HHHhcCCeEE
Confidence            99999995 999999999999887  689999987764210    000     012233221  12    2356889999


Q ss_pred             EEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        70 ih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      +-+||............+..|..-.+.+++.+.++..-..++.+|
T Consensus        74 vitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1guza1          74 IITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (142)
T ss_dssp             EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             EEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhccCCCeEEEEec
Confidence            999997554434556778999999999999999984333555555

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.13  E-value=3.9e-06  Score=61.53  Aligned_cols=72  Identities=21%  Similarity=0.289  Sum_probs=58.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHH-hcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vih~a~   74 (334)
                      .+++|.| .|.+|+++++.|.++|++|++++.+++....+... ....+.+|.++++.+.++ +.++|.||=+.+
T Consensus         1 k~~iIiG-~G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~-~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~   73 (134)
T d2hmva1           1 KQFAVIG-LGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASY-ATHAVIANATEENELLSLGIRNFEYVIVAIG   73 (134)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTT-CSEEEECCTTCTTHHHHHTGGGCSEEEECCC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHh-CCcceeeecccchhhhccCCccccEEEEEcC
Confidence            3678887 59999999999999999999999988765554443 567888999999999887 677998875543

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.08  E-value=1.6e-06  Score=64.06  Aligned_cols=104  Identities=17%  Similarity=0.212  Sum_probs=74.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCC----------CCCCCCCeEEEEcCCCChhhHHHHhcCCCE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDIS----------GLPSEGALELVYGDVTDYRSLVDACFGCHV   68 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~----------~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~   68 (334)
                      |||.|.|+ |.+|+.++..|+.++  .++..+++++++..          .+.  .......+|       .+.++++|+
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~--~~~~~~~~~-------~~~~~~adi   70 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFT--RRANIYAGD-------YADLKGSDV   70 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGS--CCCEEEECC-------GGGGTTCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhcccccccccc--ccccccCCc-------HHHhcCCCE
Confidence            99999996 999999999998776  58999987654221          011  133444333       234678999


Q ss_pred             EEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           69 IFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        69 vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      ||-+||............+..|..-.+.+++...++..-..++.+|
T Consensus        71 vvitag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          71 VIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             EEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEEecccccCCCcchhhhhccccchHHHHHHHHHhcCCCcEEEEeC
Confidence            9999998655444556778889999999999999985444555555

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.07  E-value=1.6e-05  Score=59.06  Aligned_cols=105  Identities=16%  Similarity=0.272  Sum_probs=75.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCC-------C--CCCCCCeEEEEcCCCChhhHHHHhcCCCEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDIS-------G--LPSEGALELVYGDVTDYRSLVDACFGCHVIF   70 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~-------~--~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   70 (334)
                      ||.|.|+ |++|+.++..|..+|  .++..+++.++...       +  ......+.....|.       +.++++|+||
T Consensus         8 KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~l~daDvvv   79 (148)
T d1ldna1           8 RVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DDCRDADLVV   79 (148)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GGTTTCSEEE
T ss_pred             eEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH-------HHhccceeEE
Confidence            6999996 999999999999876  47999998654310       0  00011344444442       4567899999


Q ss_pred             EeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        71 h~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      .+||............+..|....+.+++.+.++..-..++.+|
T Consensus        80 itag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt  123 (148)
T d1ldna1          80 ICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (148)
T ss_dssp             ECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             EecccccccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence            99998655445566788999999999999999985444666665

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=98.06  E-value=1.2e-05  Score=59.17  Aligned_cols=104  Identities=16%  Similarity=0.109  Sum_probs=75.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCC--CCC----------CCCCCCCeEEEEcCCCChhhHHHHhcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTS--DIS----------GLPSEGALELVYGDVTDYRSLVDACFGCH   67 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~--~~~----------~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d   67 (334)
                      ||.|+|++|.+|+.++-.|..++  .++..++....  ...          .+.  ...+...+|..       .+.++|
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~--~~~~i~~~~~~-------~~~~aD   72 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYD--SNTRVRQGGYE-------DTAGSD   72 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTT--CCCEEEECCGG-------GGTTCS
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhccccc--CCceEeeCCHH-------HhhhcC
Confidence            79999999999999999999987  47888885321  100          111  13444444432       357899


Q ss_pred             EEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           68 VIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        68 ~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      +||-+||............++.|..-.+.+.+...++..-..++.+|
T Consensus        73 iVvitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivvt  119 (142)
T d1o6za1          73 VVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (142)
T ss_dssp             EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             EEEEecccccccCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEEec
Confidence            99999997655445566789999999999999999985434566665

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=98.06  E-value=2.3e-05  Score=57.73  Aligned_cols=106  Identities=23%  Similarity=0.221  Sum_probs=70.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCCC--------CCCCCCeEEEEcCCCChhhHHHHhcCCCEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG--------LPSEGALELVYGDVTDYRSLVDACFGCHVIF   70 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~--------~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   70 (334)
                      .||.|.|+ |.+|+.++-.|+.++  .++..+++.++....        ...........+|       .+.++++|+|+
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-------~~~~~~adivv   73 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD-------YSDVKDCDVIV   73 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C-------GGGGTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc-------HHHhCCCceEE
Confidence            37999996 999999999999887  489999988765321        1111223333222       23567899999


Q ss_pred             EeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        71 h~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      -+||............+..|..-.+.+++.+.++..-..++.+|
T Consensus        74 itag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivvt  117 (142)
T d1y6ja1          74 VTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  117 (142)
T ss_dssp             ECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             EecccccCcCcchhHHhhHHHHHHHHHHHHhhccCCCceEEEec
Confidence            99997554445566788999999999999999984334566665

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.04  E-value=1.9e-06  Score=66.51  Aligned_cols=72  Identities=17%  Similarity=0.185  Sum_probs=55.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC-CCeEEEEcCCCChhhHHHHhcCCCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-GALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a   73 (334)
                      .+|||.|+ |.+|+++++.|.++|++|++++|+.++...+.+. +.......+..+.......+...|.++.+.
T Consensus         3 K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~   75 (182)
T d1e5qa1           3 KSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLI   75 (182)
T ss_dssp             CEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeec
Confidence            36999985 9999999999999999999999998755443222 245555567777777788888889888664

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.97  E-value=2.5e-06  Score=66.88  Aligned_cols=36  Identities=31%  Similarity=0.490  Sum_probs=34.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~   36 (334)
                      |||.|+||+|.+|++|++.|++.|++|.+.+|++++
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~   36 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEK   36 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            999999999999999999999999999999998764

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.95  E-value=4.2e-07  Score=68.55  Aligned_cols=109  Identities=14%  Similarity=0.063  Sum_probs=70.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC----e---EEEEEcCC--CCCC-------CCCCCCCeEEEEcCCCChhhHHHHhc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH----S---VRALVRRT--SDIS-------GLPSEGALELVYGDVTDYRSLVDACF   64 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~----~---V~~~~r~~--~~~~-------~~~~~~~v~~~~~Dl~d~~~~~~~~~   64 (334)
                      |||.|+||+|++|++++..|...+.    +   ...+.-..  +...       ... ......+...    ....+.++
T Consensus         5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~   79 (154)
T d1y7ta1           5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA-FPLLAGLEAT----DDPKVAFK   79 (154)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT-CTTEEEEEEE----SCHHHHTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccc-cccccccccC----Cchhhhcc
Confidence            6899999999999999999987642    1   11111111  1000       000 0122222221    22357788


Q ss_pred             CCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEec
Q 019878           65 GCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTS  114 (334)
Q Consensus        65 ~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~S  114 (334)
                      ++|+||-+||.......+....+..|....+.+.+.+.++.. -..++.+|
T Consensus        80 ~advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          80 DADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             cccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence            999999999986655556677889999999999999999622 23565566

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.94  E-value=1.4e-05  Score=58.81  Aligned_cols=105  Identities=20%  Similarity=0.168  Sum_probs=74.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCC-----------CCCCCCCeEEEEcCCCChhhHHHHhcCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDIS-----------GLPSEGALELVYGDVTDYRSLVDACFGCH   67 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~-----------~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d   67 (334)
                      |||.|.|+ |.+|++++-.|..+|  .++..++++++...           .+..  ..+....+  |    .+.++++|
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~--~~~i~~~~--d----~~~~~~ad   71 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDK--YPKIVGGA--D----YSLLKGSE   71 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTC--CCEEEEES--C----GGGGTTCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCC--CCccccCC--C----HHHhcccc
Confidence            99999995 999999999999876  57999987764321           0111  12222211  2    23677899


Q ss_pred             EEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           68 VIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        68 ~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      +||-.||............+..|..-...+++.+.++..-..++.+|
T Consensus        72 iVvitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          72 IIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             EEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             EEEEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEec
Confidence            99999997555445566788999999999999999984434555555

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.94  E-value=2.7e-06  Score=65.16  Aligned_cols=108  Identities=15%  Similarity=0.036  Sum_probs=72.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-----C--eEEEEEcCCCCC---------CCCCCCCCeEEEEcCCCChhhHHHHhcC
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-----H--SVRALVRRTSDI---------SGLPSEGALELVYGDVTDYRSLVDACFG   65 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-----~--~V~~~~r~~~~~---------~~~~~~~~v~~~~~Dl~d~~~~~~~~~~   65 (334)
                      ||.||||+|.||++++-.|++.+     .  .++.++.+....         ..... +....+..    .....+.+++
T Consensus        26 kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~-~~~~~~~~----~~~~~~~~~~  100 (175)
T d7mdha1          26 NIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLY-PLLREVSI----GIDPYEVFED  100 (175)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTC-TTEEEEEE----ESCHHHHTTT
T ss_pred             EEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhccccc-ccccCccc----cccchhhccC
Confidence            69999999999999999998742     1  444445433210         00000 11111111    1224677889


Q ss_pred             CCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEec
Q 019878           66 CHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTS  114 (334)
Q Consensus        66 ~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~S  114 (334)
                      .|+||-+||............+..|....+.+.+++.++.. -.+++.+|
T Consensus       101 aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1         101 VDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             CceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence            99999999986655566778899999999999999999722 34566665

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.80  E-value=1.1e-05  Score=61.27  Aligned_cols=36  Identities=44%  Similarity=0.553  Sum_probs=33.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~   37 (334)
                      |||+|.|+ |.+|+.++..|++.|++|.+++|++.+.
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~   36 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPY   36 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence            99999996 9999999999999999999999988654

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.80  E-value=4.4e-05  Score=57.06  Aligned_cols=110  Identities=16%  Similarity=0.048  Sum_probs=70.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC-------eEEEEEcCCCCC--CCC------CCCCCeEEEEcCCCChhhHHHHhcC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH-------SVRALVRRTSDI--SGL------PSEGALELVYGDVTDYRSLVDACFG   65 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~--~~~------~~~~~v~~~~~Dl~d~~~~~~~~~~   65 (334)
                      |||.|+||+|.+|++++-.|.+.+-       +++.++......  ..+      ........+..    .....+.+++
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~   79 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIA----TDKEEIAFKD   79 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEE----ESCHHHHTTT
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccccccccccc----CcccccccCC
Confidence            7999999999999999999986531       344444433210  000      00011111111    1123567889


Q ss_pred             CCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCC-CcEEEEec
Q 019878           66 CHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKT-VEKIIYTS  114 (334)
Q Consensus        66 ~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~S  114 (334)
                      .|+||-+||............++.|..-.+.+.+...++.+ ...++.+|
T Consensus        80 ~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          80 LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEec
Confidence            99999999986655556667889999999999999988622 22455555

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.77  E-value=5.3e-06  Score=61.24  Aligned_cols=106  Identities=16%  Similarity=0.175  Sum_probs=74.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCCC----CC----CCCCeEEEEcCCCChhhHHHHhcCCCEEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDISG----LP----SEGALELVYGDVTDYRSLVDACFGCHVIFH   71 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~----~~----~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih   71 (334)
                      ||.|+|+ |.+|++++..|..+|  .++..+++.++....    +.    ..........+  +    .+.++++|+||-
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~----~~~~~daDvVVi   75 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD--D----PEICRDADMVVI   75 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES--C----GGGGTTCSEEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC--C----HHHhhCCcEEEE
Confidence            7899995 999999999999887  589999987643210    00    00122332221  2    234678999999


Q ss_pred             eccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           72 TAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        72 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      +||............+..|..-.+.++..+.++..-..++.+|
T Consensus        76 taG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~ivvt  118 (143)
T d1llda1          76 TAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLIT  118 (143)
T ss_dssp             CCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             ecccccCCCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            9998655445566788999999999999999984334556555

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.75  E-value=1.7e-05  Score=59.28  Aligned_cols=108  Identities=17%  Similarity=0.106  Sum_probs=72.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCC---------CCCeEEEEcCCCChhhHHHHhcCCCEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPS---------EGALELVYGDVTDYRSLVDACFGCHVIF   70 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~---------~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   70 (334)
                      +||.|.|+ |.+|+.++..|..++ .++.+++.+++.......         .......     ......+.++++|+||
T Consensus         8 ~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~-----~~~~~~~~~~~adiVv   81 (154)
T d1pzga1           8 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVR-----AEYSYEAALTGADCVI   81 (154)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEE-----EECSHHHHHTTCSEEE
T ss_pred             CcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEe-----ccCchhhhhcCCCeEE
Confidence            47999996 999999999888777 488888877653211000         0000111     1122356778999999


Q ss_pred             EeccccCCCC-----CCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           71 HTAALVEPWL-----PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        71 h~a~~~~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      -+||......     ......+..|....+.+++.+.++..-..++.+|
T Consensus        82 itag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivs  130 (154)
T d1pzga1          82 VTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  130 (154)
T ss_dssp             ECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            9998743321     1345678899999999999999984433455555

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.72  E-value=8.3e-06  Score=64.22  Aligned_cols=73  Identities=21%  Similarity=0.293  Sum_probs=48.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcC-------------CCChhhHHHHhcCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGD-------------VTDYRSLVDACFGCH   67 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~D-------------l~d~~~~~~~~~~~d   67 (334)
                      |||.|.| .|++|..++..|+++|++|++++.++...+.+.+. ...+.+-+             +.-...+.++++++|
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~g-~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~d   78 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQG-KSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSD   78 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT-CCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCS
T ss_pred             CEEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhccc-CCcccchhhhhhhhhhhcccccccCCCHHHHHhhCC
Confidence            9999997 99999999999999999999999865432221110 00001001             111123456677899


Q ss_pred             EEEEeccc
Q 019878           68 VIFHTAAL   75 (334)
Q Consensus        68 ~vih~a~~   75 (334)
                      +++-|.+-
T Consensus        79 ~i~i~VpT   86 (202)
T d1mv8a2          79 VSFICVGT   86 (202)
T ss_dssp             EEEECCCC
T ss_pred             EEEEecCc
Confidence            99988864

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.71  E-value=2.2e-05  Score=57.88  Aligned_cols=106  Identities=18%  Similarity=0.142  Sum_probs=67.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCC----CCCC-----CCeEEE-EcCCCChhhHHHHhcCCCEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISG----LPSE-----GALELV-YGDVTDYRSLVDACFGCHVI   69 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~----~~~~-----~~v~~~-~~Dl~d~~~~~~~~~~~d~v   69 (334)
                      +||.|.|+ |.+|++++-.|..++ .++..++..++....    +...     ...++. ..|       .+.+++.|+|
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d-------~~~~~~advv   73 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNN-------YADTANSDVI   73 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC-------GGGGTTCSEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCc-------HHHhcCCCEE
Confidence            47999995 999999999998876 488888877653210    0000     011222 122       2235679999


Q ss_pred             EEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           70 FHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        70 ih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      |-+||............+..|....+.+++...++..-..++.+|
T Consensus        74 vitag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          74 VVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             EECCSCC---------CHHHHHHHHHHHHHHHGGGCTTCEEEECS
T ss_pred             EEeeeccCCcCcchhHHHhHHHHHHHHHHHHHhccCCCceEEEeC
Confidence            999997554444556788999999999999999984434555554

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.71  E-value=4.9e-05  Score=56.84  Aligned_cols=105  Identities=19%  Similarity=0.145  Sum_probs=74.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCC----------CCCCCCCeEEEEcCCCChhhHHHHhcCCCE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDIS----------GLPSEGALELVYGDVTDYRSLVDACFGCHV   68 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~----------~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~   68 (334)
                      +||.|+|+ |.+|+.++..|..+|  .++..++++++...          .... ........|.       +.+.++|+
T Consensus        20 ~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~-~~~~~~~~d~-------~~~~~adi   90 (159)
T d2ldxa1          20 CKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLS-TPKIVFGKDY-------NVSANSKL   90 (159)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCS-CCEEEEESSG-------GGGTTEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcC-CCeEEeccch-------hhhccccE
Confidence            36999995 999999999999887  48999987653210          0111 1222233332       34578999


Q ss_pred             EEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           69 IFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        69 vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      ||-+||............++.|....+.+.....++..-..++.+|
T Consensus        91 vvitag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvt  136 (159)
T d2ldxa1          91 VIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVT  136 (159)
T ss_dssp             EEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECS
T ss_pred             EEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeC
Confidence            9999998655555666788999999999999998885444566666

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.71  E-value=0.00014  Score=53.47  Aligned_cols=94  Identities=12%  Similarity=0.089  Sum_probs=53.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC----CeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG----HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~   76 (334)
                      |||.|.||||++|+.|++.|++..    .++..++.+.............. ...+..+    ...++++|+|+.+.+..
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~~~~~~~-~~~~~~~----~~~~~~~DvvF~alp~~   75 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKDAG-MLHDAFD----IESLKQLDAVITCQGGS   75 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCCSSSCCC-BCEETTC----HHHHTTCSEEEECSCHH
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccccccCCcce-eeecccc----hhhhccccEEEEecCch
Confidence            999999999999999999887642    35555544332111111000000 0011122    23457899999887531


Q ss_pred             CCCCCCcccchhhhhHHHHHHHHHHHhcCCCc-EEEEeccc
Q 019878           77 EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVE-KIIYTSSF  116 (334)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~Ss~  116 (334)
                                      -+..+...+.+. +.+ .+|=.|+.
T Consensus        76 ----------------~s~~~~~~l~~~-g~~~~VIDlSsd   99 (147)
T d1mb4a1          76 ----------------YTEKVYPALRQA-GWKGYWIDAAST   99 (147)
T ss_dssp             ----------------HHHHHHHHHHHT-TCCSEEEESSST
T ss_pred             ----------------HHHHHhHHHHHc-CCceEEEeCCcc
Confidence                            124555666665 333 57767764

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.69  E-value=2.5e-05  Score=57.66  Aligned_cols=92  Identities=17%  Similarity=0.125  Sum_probs=53.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC---CeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG---HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVE   77 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~   77 (334)
                      |+|.|.||||++|+.|++.|.+++   .++..+..+......      +.+..-|+.-.+.-...+.++|+++.+++.. 
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~------i~~~~~~~~~~~~~~~~~~~~d~vf~a~p~~-   75 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQR------MGFAESSLRVGDVDSFDFSSVGLAFFAAAAE-   75 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCE------EEETTEEEECEEGGGCCGGGCSEEEECSCHH-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcc------eeeccccchhccchhhhhccceEEEecCCcc-
Confidence            899999999999999999998654   466666544332221      2111111111111122345689888776521 


Q ss_pred             CCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEeccc
Q 019878           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSF  116 (334)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~  116 (334)
                                     .+..+...+.+. + .++|-.||.
T Consensus        76 ---------------~s~~~~~~~~~~-g-~~VID~Ss~   97 (144)
T d2hjsa1          76 ---------------VSRAHAERARAA-G-CSVIDLSGA   97 (144)
T ss_dssp             ---------------HHHHHHHHHHHT-T-CEEEETTCT
T ss_pred             ---------------hhhhhccccccC-C-ceEEeechh
Confidence                           123444555554 2 478877775

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.68  E-value=7e-05  Score=52.35  Aligned_cols=65  Identities=22%  Similarity=0.151  Sum_probs=53.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc--CCCEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIF   70 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vi   70 (334)
                      ||.|.| +|++|+.++....+.|+++++++.+++......   .-.++.+|+.|.+.+.+...  ++|+|-
T Consensus        13 kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~v---a~~~i~~~~~d~~~l~~~~~~~~~DviT   79 (111)
T d1kjqa2          13 RVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMHV---AHRSHVINMLDGDALRRVVELEKPHYIV   79 (111)
T ss_dssp             EEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG---SSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             EEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhhc---CCeEEECCCCCHHHHHHHHHhhCCceEE
Confidence            699999 899999999999999999999998876433211   23778899999999988774  578885

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.65  E-value=1.7e-05  Score=59.43  Aligned_cols=105  Identities=16%  Similarity=0.105  Sum_probs=74.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCC-------C--CCCCCCeEEEEcCCCChhhHHHHhcCCCEEE
Q 019878            2 KILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDIS-------G--LPSEGALELVYGDVTDYRSLVDACFGCHVIF   70 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~-------~--~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   70 (334)
                      ||.|.|+ |.+|+.++-.|..+|  .++..+++.++...       +  ...........+|.       +.+.++|+||
T Consensus        22 KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~-------~~~~~adiVV   93 (160)
T d1i0za1          22 KITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDY-------SVTANSKIVV   93 (160)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSG-------GGGTTCSEEE
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccch-------hhcccccEEE
Confidence            7999995 999999999999988  48999988643211       0  00001222222232       3467899999


Q ss_pred             EeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           71 HTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        71 h~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      ..||............+..|....+.++...++...-.-++.+|
T Consensus        94 itAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvt  137 (160)
T d1i0za1          94 VTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVS  137 (160)
T ss_dssp             ECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EecCCccccCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            99998655445566788999999999999999984434566666

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.65  E-value=6.4e-06  Score=62.68  Aligned_cols=65  Identities=25%  Similarity=0.335  Sum_probs=44.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a   73 (334)
                      |||.|.| +|.+|+.+++.|.++|++|++.+|+++..+...+...+.... |  +    .+.++++|+||-+.
T Consensus         1 MkI~iIG-~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~-~--~----~~~~~~~DiIilav   65 (165)
T d2f1ka2           1 MKIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAG-Q--D----LSLLQTAKIIFLCT   65 (165)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEE-S--C----GGGGTTCSEEEECS
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceee-e--e----cccccccccccccC
Confidence            9999998 699999999999999999999999865432211111111111 1  1    23567899888543

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.62  E-value=7.5e-05  Score=55.32  Aligned_cols=107  Identities=17%  Similarity=0.179  Sum_probs=71.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCC----CC-----CCCeEEEEcCCCChhhHHHHhcCCCEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGL----PS-----EGALELVYGDVTDYRSLVDACFGCHVIF   70 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~----~~-----~~~v~~~~~Dl~d~~~~~~~~~~~d~vi   70 (334)
                      +||.|.| +|.+|++++..|..++ .++..+++.++.....    ..     .........+  +    .+.+++.|+||
T Consensus         4 ~KI~IIG-aG~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~----~~~~~~advvv   76 (150)
T d1t2da1           4 AKIVLVG-SGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--T----YDDLAGADVVI   76 (150)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--C----GGGGTTCSEEE
T ss_pred             CeEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--c----ccccCCCcEEE
Confidence            5899999 5999999998887776 5788888876532110    00     0012222211  1    24557899999


Q ss_pred             EeccccCCC-----CCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           71 HTAALVEPW-----LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        71 h~a~~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      -+|+.....     ..+....+..|....+.+++.++++..-..++.+|
T Consensus        77 itag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivvt  125 (150)
T d1t2da1          77 VTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  125 (150)
T ss_dssp             ECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             EecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            999974321     11345678999999999999999985434566665

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.60  E-value=0.00011  Score=53.97  Aligned_cols=68  Identities=12%  Similarity=0.088  Sum_probs=41.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC----CeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQG----HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      ||.|.||||++|+.+++.|+++.    .+++.+.++.......... .-.....++.+    ...+.++|+++.+++
T Consensus         3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~-~~~~~~~~~~~----~~~~~~~DivF~a~~   74 (146)
T d1t4ba1           3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFG-GTTGTLQDAFD----LEALKALDIIVTCQG   74 (146)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGG-TCCCBCEETTC----HHHHHTCSEEEECSC
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccccccc-CCceeeecccc----hhhhhcCcEEEEecC
Confidence            59999999999999999887652    3566666554432221110 00111112223    224578999998886

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.53  E-value=0.00015  Score=53.47  Aligned_cols=104  Identities=19%  Similarity=0.190  Sum_probs=70.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC--CeEEEEEcCCCCCC-----------CCCCCCCeEEEEcCCCChhhHHHHhcCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG--HSVRALVRRTSDIS-----------GLPSEGALELVYGDVTDYRSLVDACFGCH   67 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~-----------~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d   67 (334)
                      .||.|+| +|.+|+.++-.|+.+|  .++..+++++++..           ...  ........|.       +.++++|
T Consensus         2 kKI~IIG-aG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~--~~~~~~~~d~-------~~l~~ad   71 (146)
T d1hyha1           2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLE--AHGNIVINDW-------AALADAD   71 (146)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSS--SCCEEEESCG-------GGGTTCS
T ss_pred             CeEEEEC-cCHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccC--CccceeccCH-------HHhcccc
Confidence            3799999 5999999999999876  58888887654311           011  1233333332       3457899


Q ss_pred             EEEEeccccCCC----CCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           68 VIFHTAALVEPW----LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        68 ~vih~a~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      +||-+||.....    .......++.|....+.+.+...++..-..++.+|
T Consensus        72 iVVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aivivvt  122 (146)
T d1hyha1          72 VVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (146)
T ss_dssp             EEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEec
Confidence            999999964321    12234567889999999999999984434566555

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.51  E-value=2.4e-05  Score=59.71  Aligned_cols=71  Identities=20%  Similarity=0.192  Sum_probs=50.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      +|||+||+|-+|...++.+...|.+|+++++++++.+.+.+. ++..+ .|..+.........++|+|+++.|
T Consensus        30 ~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~l-Ga~~~-i~~~~~~~~~~~~~g~D~v~d~~G  100 (171)
T d1iz0a2          30 KVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLAL-GAEEA-ATYAEVPERAKAWGGLDLVLEVRG  100 (171)
T ss_dssp             EEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHT-TCSEE-EEGGGHHHHHHHTTSEEEEEECSC
T ss_pred             EEEEEeccccchhhhhhhhccccccccccccccccccccccc-cccee-eehhhhhhhhhccccccccccccc
Confidence            599999999999999999999999999999987665433322 22222 144443333334457999999876

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.47  E-value=0.00019  Score=51.46  Aligned_cols=72  Identities=21%  Similarity=0.291  Sum_probs=51.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~   80 (334)
                      |||.|.|++|-.|+.+++.+.++|+++.+..-...                        .+.++++|+||.+...     
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~------------------------~~~~~~~DVvIDFS~p-----   51 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNG------------------------VEELDSPDVVIDFSSP-----   51 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTE------------------------EEECSCCSEEEECSCG-----
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCc------------------------HHHhccCCEEEEecCH-----
Confidence            99999999999999999999999988775432110                        0123568999988532     


Q ss_pred             CCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                                 .++...++.|.++ ++ .+|.-+
T Consensus        52 -----------~~~~~~l~~~~~~-~~-p~ViGT   72 (128)
T d1vm6a3          52 -----------EALPKTVDLCKKY-RA-GLVLGT   72 (128)
T ss_dssp             -----------GGHHHHHHHHHHH-TC-EEEECC
T ss_pred             -----------HHHHHHHHHHHhc-CC-CEEEEc
Confidence                       2456888999988 43 554433

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.40  E-value=4e-05  Score=59.04  Aligned_cols=97  Identities=15%  Similarity=0.033  Sum_probs=60.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC-------CCeEEEEcCCCChhhHHHHhcCCCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE-------GALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-------~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a   73 (334)
                      +||.|.| +|.+|..++..|.++|++|.+++|++++.+.+...       +..+..........+..++++++|+||-+.
T Consensus         2 k~iaIiG-aG~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~v   80 (184)
T d1bg6a2           2 KTYAVLG-LGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVV   80 (184)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECS
T ss_pred             CEEEEEC-ccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEEE
Confidence            6899999 59999999999999999999999976432211110       111111112112234677888999999765


Q ss_pred             cccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           74 ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      ..                .....+++..+++-.-..+|.++
T Consensus        81 ~~----------------~~~~~~~~~i~~~l~~~~~iv~~  105 (184)
T d1bg6a2          81 PA----------------IHHASIAANIASYISEGQLIILN  105 (184)
T ss_dssp             CG----------------GGHHHHHHHHGGGCCTTCEEEES
T ss_pred             ch----------------hHHHHHHHHhhhccCCCCEEEEe
Confidence            31                12356777777663333445444

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.39  E-value=7.3e-05  Score=48.32  Aligned_cols=37  Identities=38%  Similarity=0.399  Sum_probs=33.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~   37 (334)
                      ++|||+||+|.+|...++.+...|.+|+++.+++++.
T Consensus        33 ~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~   69 (77)
T d1o8ca2          33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTH   69 (77)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHH
Confidence            3699999999999999999999999999999987653

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.38  E-value=0.00017  Score=55.25  Aligned_cols=97  Identities=16%  Similarity=0.197  Sum_probs=61.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC--CCCCC-----CCCCeEEEEcCCCChhhHHHHhcCCCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD--ISGLP-----SEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a   73 (334)
                      |||.|.| +|-.|.+++..|.++|++|.+..|+.++  ...+.     ..-.......++.-.+++.++++++|+||.+.
T Consensus         1 MkI~ViG-aG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~av   79 (180)
T d1txga2           1 MIVSILG-AGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV   79 (180)
T ss_dssp             CEEEEES-CCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhccc
Confidence            9999999 7999999999999999999999885321  00000     00011111112333566788899999998765


Q ss_pred             cccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           74 ALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        74 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      ..                .+...+++....+-.-+.+|.++
T Consensus        80 ps----------------~~~~~~~~~l~~~l~~~~ii~~t  104 (180)
T d1txga2          80 ST----------------DGVLPVMSRILPYLKDQYIVLIS  104 (180)
T ss_dssp             CG----------------GGHHHHHHHHTTTCCSCEEEECC
T ss_pred             ch----------------hhhHHHHHhhccccccceecccc
Confidence            32                23456677666653333444443

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.37  E-value=4.5e-05  Score=58.32  Aligned_cols=71  Identities=23%  Similarity=0.263  Sum_probs=47.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCCh-hhHHHHh--cCCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY-RSLVDAC--FGCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~-~~~~~~~--~~~d~vih~a~   74 (334)
                      +|||+||+|.+|+..++.....|.+|+++.+++++.+......--..+  |..+. ++.....  .++|+||++.|
T Consensus        34 ~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~lGa~~vi--~~~~~~~~~~~~~~~~gvD~vid~vg  107 (176)
T d1xa0a2          34 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVL--AREDVMAERIRPLDKQRWAAAVDPVG  107 (176)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEE--ECC---------CCSCCEEEEEECST
T ss_pred             EEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhcccceee--ecchhHHHHHHHhhccCcCEEEEcCC
Confidence            599999999999999999999999999999988875443332112222  22221 1222222  24999999987

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=3.7e-05  Score=58.83  Aligned_cols=71  Identities=18%  Similarity=0.163  Sum_probs=49.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHH---Hhc--CCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVD---ACF--GCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~---~~~--~~d~vih~a~   74 (334)
                      +|||+||+|.+|...++.+...|.+|+++++++++.+.+.+. +...+ .|.++.+..++   ...  ++|+|+++.|
T Consensus        31 ~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~-Ga~~v-i~~~~~~~~~~i~~~t~~~g~d~v~d~~g  106 (174)
T d1yb5a2          31 SVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQN-GAHEV-FNHREVNYIDKIKKYVGEKGIDIIIEMLA  106 (174)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-TCSEE-EETTSTTHHHHHHHHHCTTCEEEEEESCH
T ss_pred             EEEEEeccccccccccccccccCccccccccccccccccccc-Ccccc-cccccccHHHHhhhhhccCCceEEeeccc
Confidence            599999999999999999999999999999876544332222 22222 25555443333   322  4899999887

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.32  E-value=7.3e-05  Score=57.53  Aligned_cols=73  Identities=21%  Similarity=0.256  Sum_probs=50.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEE-EcCCCChhhHHHHhc--CCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELV-YGDVTDYRSLVDACF--GCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~-~~Dl~d~~~~~~~~~--~~d~vih~a~   74 (334)
                      +|||+||+|.+|...++.....|.+|+++++++++.+.+.....-+.+ .-|-...+.+.+...  ++|+|+++.|
T Consensus        32 ~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D~vG  107 (182)
T d1v3va2          32 TVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVG  107 (182)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSC
T ss_pred             EEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhhhhhcccccccHHHHHHHHhhcCCCceeEEecC
Confidence            599999999999999999999999999999987654333332222222 222222333333333  4999999987

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.26  E-value=0.00061  Score=53.86  Aligned_cols=71  Identities=17%  Similarity=0.184  Sum_probs=51.3

Q ss_pred             CcEEEEcC----------------CChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhH----H
Q 019878            1 MKILVSGA----------------SGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSL----V   60 (334)
Q Consensus         1 m~ilItG~----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~----~   60 (334)
                      |+||||+|                ||..|.+|++++..+|++|+++.-.....  .+  ..+..+...  +.+++    .
T Consensus         7 ~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~--~p--~~~~~~~~~--t~~~m~~~~~   80 (223)
T d1u7za_           7 LNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP--TP--PFVKRVDVM--TALEMEAAVN   80 (223)
T ss_dssp             CEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC--CC--TTEEEEECC--SHHHHHHHHH
T ss_pred             CEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC--cc--cccccceeh--hhHHHHHHHH
Confidence            57888865                79999999999999999999987765421  11  256666443  44333    3


Q ss_pred             HHhcCCCEEEEeccccC
Q 019878           61 DACFGCHVIFHTAALVE   77 (334)
Q Consensus        61 ~~~~~~d~vih~a~~~~   77 (334)
                      +.+.++|++|++|+..+
T Consensus        81 ~~~~~~D~~i~aAAvsD   97 (223)
T d1u7za_          81 ASVQQQNIFIGCAAVAD   97 (223)
T ss_dssp             HHGGGCSEEEECCBCCS
T ss_pred             hhhccceeEeeeechhh
Confidence            44567999999999744

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.15  E-value=8.8e-05  Score=57.05  Aligned_cols=71  Identities=18%  Similarity=0.313  Sum_probs=50.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChh---hHHHHh--cCCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYR---SLVDAC--FGCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~---~~~~~~--~~~d~vih~a~   74 (334)
                      +|||+||+|.+|...++.+...|.+|+++++++++.+.+.+. +...+ .|..+.+   .+.+..  .++|+|+++.|
T Consensus        28 ~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~-Ga~~v-i~~~~~~~~~~v~~~t~~~g~d~v~d~~g  103 (183)
T d1pqwa_          28 RVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRL-GVEYV-GDSRSVDFADEILELTDGYGVDVVLNSLA  103 (183)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTT-CCSEE-EETTCSTHHHHHHHHTTTCCEEEEEECCC
T ss_pred             EEEEECCCCCcccccchhhccccccceeeecccccccccccc-ccccc-ccCCccCHHHHHHHHhCCCCEEEEEeccc
Confidence            599999999999999999999999999999887654433332 22322 2444443   333333  34999999987

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.12  E-value=3.2e-05  Score=58.36  Aligned_cols=65  Identities=25%  Similarity=0.306  Sum_probs=49.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |||-|.| .|.+|+.+++.|+++|++|++.+|++++.+.+.+. ....       .+...++.+++|+||-+-.
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~-~~~~-------~~~~~e~~~~~d~ii~~v~   65 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAA-GAET-------ASTAKAIAEQCDVIITMLP   65 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TCEE-------CSSHHHHHHHCSEEEECCS
T ss_pred             CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHh-hhhh-------cccHHHHHhCCCeEEEEcC
Confidence            9999998 89999999999999999999999987754433221 2221       1234566778999987753

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.11  E-value=0.00022  Score=52.95  Aligned_cols=34  Identities=32%  Similarity=0.472  Sum_probs=31.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~   35 (334)
                      ||.|.||.|.+|+++++.|.+.||+|.+.+|+..
T Consensus        11 kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~   44 (152)
T d2pv7a2          11 KIVIVGGYGKLGGLFARYLRASGYPISILDREDW   44 (152)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred             eEEEEcCCCHHHHHHHHHHHHcCCCcEecccccc
Confidence            6999999999999999999999999999988754

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.09  E-value=0.00011  Score=54.69  Aligned_cols=65  Identities=14%  Similarity=0.242  Sum_probs=45.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      |||.|.| .|.+|+.+++.|+++|++|.+.++++++....... ++...       +...++++++|+||-+..
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~-~~~~~-------~~~~e~~~~~diIi~~v~   65 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERAR-TVGVT-------ETSEEDVYSCPVVISAVT   65 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHH-HHTCE-------ECCHHHHHTSSEEEECSC
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhh-ccccc-------ccHHHHHhhcCeEEEEec
Confidence            9999998 89999999999999999999988776543211100 11111       123456788999997653

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.03  E-value=0.0006  Score=50.51  Aligned_cols=70  Identities=20%  Similarity=0.251  Sum_probs=55.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC----CCCCCCCCeEEEEcCCCChhhHHHHh-cCCCEEEEec
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI----SGLPSEGALELVYGDVTDYRSLVDAC-FGCHVIFHTA   73 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~~v~~~~~Dl~d~~~~~~~~-~~~d~vih~a   73 (334)
                      +|+|.| .|-+|..+++.|.++|++|++++.++++.    ..... .++.++.||.+|++.+.++- +++|.||-+.
T Consensus         5 HiII~G-~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~-~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~   79 (153)
T d1id1a_           5 HFIVCG-HSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG-DNADVIPGDSNDSSVLKKAGIDRCRAILALS   79 (153)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC-TTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhc-CCcEEEEccCcchHHHHHhccccCCEEEEcc
Confidence            388888 58999999999999999999998876421    11111 27899999999999987764 5689998665

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=96.96  E-value=0.00051  Score=51.89  Aligned_cols=73  Identities=19%  Similarity=0.103  Sum_probs=47.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCC--CChhhHHHHh-----cCCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDV--TDYRSLVDAC-----FGCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl--~d~~~~~~~~-----~~~d~vih~a~   74 (334)
                      +|+|+| +|.+|...++.+...|.+|+++++++.+.+...+..--..+..|-  .+.....+.+     .++|+||.++|
T Consensus        29 ~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga~~~~~~~~~~~~~~~~~~~~~~~~g~g~D~vid~~g  107 (170)
T d1e3ja2          29 TVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSG  107 (170)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEECSC
T ss_pred             EEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHHcCCcEEEeccccccccchhhhhhhcccccCCceeeecCC
Confidence            589997 799999999999999999999999876543222111112222232  2333333333     34899999987


Q ss_pred             c
Q 019878           75 L   75 (334)
Q Consensus        75 ~   75 (334)
                      .
T Consensus       108 ~  108 (170)
T d1e3ja2         108 N  108 (170)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=96.92  E-value=6.7e-05  Score=56.30  Aligned_cols=68  Identities=25%  Similarity=0.331  Sum_probs=50.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      +|||.|+ |-+|+.+++.|..+|. ++.+..|+.++...+...-+.+.     .+.+++.+.+.++|+||.+.+.
T Consensus        26 ~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~-----~~~~~~~~~l~~~Divi~atss   94 (159)
T d1gpja2          26 TVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEA-----VRFDELVDHLARSDVVVSATAA   94 (159)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEE-----CCGGGHHHHHHTCSEEEECCSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhccc-----ccchhHHHHhccCCEEEEecCC
Confidence            6999996 9999999999999996 68888998665433222112222     3456778888999999999874

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.92  E-value=3.6e-05  Score=58.36  Aligned_cols=39  Identities=33%  Similarity=0.400  Sum_probs=35.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL   40 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~   40 (334)
                      +|||+||+|-+|...++.....|.+|+++++++++.+.+
T Consensus        26 ~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~   64 (167)
T d1tt7a2          26 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL   64 (167)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             EEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHH
Confidence            599999999999999999999999999999998875443

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.90  E-value=0.00013  Score=55.25  Aligned_cols=71  Identities=11%  Similarity=-0.028  Sum_probs=49.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCC-ChhhHHHHhcCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVT-DYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~-d~~~~~~~~~~~d~vih~a~~   75 (334)
                      +|+|.|+ |.+|...++.+...|.+|+++++++.+.+...+. +...+. |.. +.+......+.+|+++.+.+.
T Consensus        30 ~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~l-Ga~~~i-~~~~~~~~~~~~~~~~d~vi~~~~~  101 (168)
T d1piwa2          30 KVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKM-GADHYI-ATLEEGDWGEKYFDTFDLIVVCASS  101 (168)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH-TCSEEE-EGGGTSCHHHHSCSCEEEEEECCSC
T ss_pred             EEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhcc-CCcEEe-eccchHHHHHhhhcccceEEEEecC
Confidence            5899985 9999999999888999999999998765433222 222221 222 333344455669999998764

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.79  E-value=0.00085  Score=50.68  Aligned_cols=73  Identities=18%  Similarity=0.102  Sum_probs=48.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHh-----cCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC-----FGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~-----~~~d~vih~a~~   75 (334)
                      +|+|.|+ |.+|...++.+...|. +|+++++++.+.+...+.+--.++..+-.+.....+.+     .++|+||.+.|.
T Consensus        29 ~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvid~~G~  107 (171)
T d1pl8a2          29 KVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGA  107 (171)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECSCC
T ss_pred             EEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcccccccccccccccccccccCCCCceEEEeccCC
Confidence            4899985 9999999999999997 79999988765432222111133333434544444433     258999999873

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.78  E-value=8.8e-05  Score=55.26  Aligned_cols=65  Identities=17%  Similarity=0.116  Sum_probs=46.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEec
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a   73 (334)
                      |||.+.| +|-+|+++++.|.+.|+++++.+|+.++...+.+.-++.+       ..+..++++++|+|+-+.
T Consensus         1 MkIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~-------~~~~~~~~~~~dvIilav   65 (152)
T d2ahra2           1 MKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY-------AMSHQDLIDQVDLVILGI   65 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB-------CSSHHHHHHTCSEEEECS
T ss_pred             CEEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceee-------echhhhhhhccceeeeec
Confidence            9999998 9999999999999999999999998665433221101111       123456677899888553

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=96.75  E-value=0.00014  Score=55.93  Aligned_cols=31  Identities=29%  Similarity=0.581  Sum_probs=25.8

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC-CeEEEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALV   31 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~   31 (334)
                      +||.|.||||+.|+.|++.|.+.. .++..+.
T Consensus         6 ikVaIlGATGyvG~elirLL~~HP~~ei~~l~   37 (183)
T d2cvoa1           6 VRIAVLGASGYTGAEIVRLLANHPQFRIKVMT   37 (183)
T ss_dssp             EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             cEEEEECcccHHHHHHHHHHHhCCCceEEEEe
Confidence            479999999999999999999864 4665554

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.75  E-value=7.1e-05  Score=57.26  Aligned_cols=70  Identities=26%  Similarity=0.197  Sum_probs=46.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc--CCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vih~a~   74 (334)
                      +|||+||+|.+|...++.....|.+|+++++++++.+.+... +...+. |..+.+. .+.+.  ..|.+|++.+
T Consensus        34 ~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~l-Gad~vi-~~~~~~~-~~~l~~~~~~~vvD~Vg  105 (177)
T d1o89a2          34 EIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSL-GASRVL-PRDEFAE-SRPLEKQVWAGAIDTVG  105 (177)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHH-TEEEEE-EGGGSSS-CCSSCCCCEEEEEESSC
T ss_pred             cEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHhh-cccccc-ccccHHH-HHHHHhhcCCeeEEEcc
Confidence            489999999999999999999999999999988765433322 223221 3222222 22222  2577777765

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.74  E-value=0.0051  Score=41.01  Aligned_cols=66  Identities=20%  Similarity=0.328  Sum_probs=47.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC--CCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS--GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      ||+|.|. |--|.++++.|.++|++|++.+.+.....  .+..  .+.+..+...     ...+.++|.||-.-|.
T Consensus         7 ~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~~--~~~~~~~~~~-----~~~~~~~d~vi~SPGi   74 (93)
T d2jfga1           7 NVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPE--AVERHTGSLN-----DEWLMAADLIVASPGI   74 (93)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSCT--TSCEEESBCC-----HHHHHHCSEEEECTTS
T ss_pred             EEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHhh--ccceeecccc-----hhhhccCCEEEECCCC
Confidence            6999995 88899999999999999999998665322  2222  4555555432     2345678999987775

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.71  E-value=0.00033  Score=52.91  Aligned_cols=71  Identities=18%  Similarity=0.120  Sum_probs=52.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      +|||.|+ |.+|...++.+...|.+++++++++++.+...+. +...+ .|..+.+......+++|++|.+.|.
T Consensus        33 ~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~l-Gad~~-i~~~~~~~~~~~~~~~D~vid~~g~  103 (168)
T d1uufa2          33 KVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKAL-GADEV-VNSRNADEMAAHLKSFDFILNTVAA  103 (168)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH-TCSEE-EETTCHHHHHTTTTCEEEEEECCSS
T ss_pred             EEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHhcc-CCcEE-EECchhhHHHHhcCCCceeeeeeec
Confidence            5899985 8899999999999999999999887754322222 22222 3666666666666779999999873

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.70  E-value=0.0012  Score=50.43  Aligned_cols=73  Identities=11%  Similarity=0.167  Sum_probs=55.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCC-------CCCCeEEEEcCCCChhhHHHHhcCCCEEEEec
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLP-------SEGALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-------~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a   73 (334)
                      +|+|.| +|..|++++..|.+.|. +++++.|++++.+.+.       ..-.......|+.+.+.+...+.++|+|||+.
T Consensus        20 ~vlIlG-aGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~diiIN~T   98 (182)
T d1vi2a1          20 TMVLLG-AGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGT   98 (182)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEEECS
T ss_pred             EEEEEC-CcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhcccceecccc
Confidence            689999 58889999999999885 7888899876543211       00123445678889898999999999999998


Q ss_pred             cc
Q 019878           74 AL   75 (334)
Q Consensus        74 ~~   75 (334)
                      ..
T Consensus        99 p~  100 (182)
T d1vi2a1          99 KV  100 (182)
T ss_dssp             ST
T ss_pred             CC
Confidence            65

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=96.68  E-value=0.001  Score=49.63  Aligned_cols=94  Identities=20%  Similarity=0.220  Sum_probs=54.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC-CCeEEEEE-cCCCCCC--CCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALV-RRTSDIS--GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~-g~~V~~~~-r~~~~~~--~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~   76 (334)
                      |||.|.|++|-.|+.+++.+.+. +.++.+.. |...+..  .+....+..  ..+..-...+...++.+|+||.+.-  
T Consensus         5 ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~--~~~~~~~~~~~~~~~~~DViIDFs~--   80 (162)
T d1diha1           5 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAG--KTGVTVQSSLDAVKDDFDVFIDFTR--   80 (162)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSS--CCSCCEESCSTTTTTSCSEEEECSC--
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccc--cCCceeeccHHHHhcccceEEEecc--
Confidence            68999999999999999999875 56665443 3322111  010000000  0011111223345678999998853  


Q ss_pred             CCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           77 EPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                                    -.++...++.|.++ ++ .+|.-+
T Consensus        81 --------------p~~~~~~~~~a~~~-~~-~~ViGT  102 (162)
T d1diha1          81 --------------PEGTLNHLAFCRQH-GK-GMVIGT  102 (162)
T ss_dssp             --------------HHHHHHHHHHHHHT-TC-EEEECC
T ss_pred             --------------HHHHHHHHHHHHhc-cc-eeEEec
Confidence                          23456788899887 43 454433

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=96.62  E-value=0.00027  Score=54.02  Aligned_cols=71  Identities=14%  Similarity=0.117  Sum_probs=50.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhh---HHHHhc--CCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRS---LVDACF--GCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~---~~~~~~--~~d~vih~a~   74 (334)
                      +|||+||+|.+|..+++.....|.+|+++++++++.+.+.+. +...+ .|..+.+.   +.++..  ++|+|+++.+
T Consensus        31 ~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~l-Ga~~v-i~~~~~d~~~~v~~~t~g~g~d~v~d~~g  106 (179)
T d1qora2          31 QFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKA-GAWQV-INYREEDLVERLKEITGGKKVRVVYDSVG  106 (179)
T ss_dssp             EEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH-TCSEE-EETTTSCHHHHHHHHTTTCCEEEEEECSC
T ss_pred             EEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhc-CCeEE-EECCCCCHHHHHHHHhCCCCeEEEEeCcc
Confidence            599999999999999999999999999999998765433322 22222 25555433   333333  3899999987

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.51  E-value=0.00039  Score=52.74  Aligned_cols=33  Identities=27%  Similarity=0.412  Sum_probs=26.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRR   33 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~   33 (334)
                      |||.|.||||++|+.|++.|.+.. .++..+..+
T Consensus         2 ikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~   35 (176)
T d1vkna1           2 IRAGIIGATGYTGLELVRLLKNHPEAKITYLSSR   35 (176)
T ss_dssp             EEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCCceEEEeecc
Confidence            589999999999999999998754 466655433

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.49  E-value=0.00042  Score=52.39  Aligned_cols=35  Identities=23%  Similarity=0.583  Sum_probs=29.8

Q ss_pred             Cc-EEEEcCCChhhHHHHHHHHhCCC--eEEEEEcCCCC
Q 019878            1 MK-ILVSGASGYLGGRLCHALLKQGH--SVRALVRRTSD   36 (334)
Q Consensus         1 m~-ilItG~tG~iG~~l~~~L~~~g~--~V~~~~r~~~~   36 (334)
                      |+ |+|.| .|.+|+++++.|.+.|+  +|++.+++++.
T Consensus         1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~   38 (171)
T d2g5ca2           1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPES   38 (171)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHH
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHH
Confidence            66 99998 79999999999999985  67888887653

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.46  E-value=0.0018  Score=42.83  Aligned_cols=69  Identities=14%  Similarity=0.140  Sum_probs=49.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC-CCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~   76 (334)
                      |||.+.|..|-==+.|++.|+++|++|.+-|+...... .|.. .+++++.+.  +.+    .+.++|.||...++.
T Consensus         2 ~~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~-~Gi~i~~gh--~~~----~i~~~d~vV~SsAI~   71 (89)
T d1j6ua1           2 MKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRK-LGIPIFVPH--SAD----NWYDPDLVIKTPAVR   71 (89)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHH-TTCCEESSC--CTT----SCCCCSEEEECTTCC
T ss_pred             cEEEEEeECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHH-CCCeEEeee--ccc----ccCCCCEEEEecCcC
Confidence            89999998887777999999999999999998764321 1222 256666542  222    235789999888763

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=96.38  E-value=0.0011  Score=49.15  Aligned_cols=24  Identities=25%  Similarity=0.430  Sum_probs=21.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH   25 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~   25 (334)
                      ||.|.||||++|..|++.|.++.+
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCC
Confidence            689999999999999999988753

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.37  E-value=0.00036  Score=52.36  Aligned_cols=65  Identities=26%  Similarity=0.352  Sum_probs=47.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      +||.+.| .|..|+.+++.|+++||+|.+.+|++++.+.+...        .........+.+..+|+|+-+..
T Consensus         2 ~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~--------~~~~~~~~~e~~~~~diii~~v~   66 (162)
T d3cuma2           2 KQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAA--------GASAARSARDAVQGADVVISMLP   66 (162)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHT--------TCEECSSHHHHHTSCSEEEECCS
T ss_pred             CEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhh--------hccccchhhhhccccCeeeeccc
Confidence            3699998 89999999999999999999999987654332221        11112335677788998887764

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=96.36  E-value=0.00063  Score=52.04  Aligned_cols=73  Identities=18%  Similarity=0.144  Sum_probs=46.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhH----HHHhc--CCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSL----VDACF--GCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~----~~~~~--~~d~vih~a~   74 (334)
                      +|||+|+ |-+|...++.+...|. +|+++++++.+.+...+.+--..+.-.=.+..+.    .+...  ++|+||.+.|
T Consensus        31 ~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~~g~Dvvid~vG  109 (182)
T d1vj0a2          31 TVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATG  109 (182)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEECSS
T ss_pred             EEEEECC-CccchhheecccccccccccccccccccccccccccceEEEeccccchHHHHHHHHHhhCCCCceEEeecCC
Confidence            5899985 9999999999999997 7999999876543222211112332221233222    22222  4899999987


Q ss_pred             c
Q 019878           75 L   75 (334)
Q Consensus        75 ~   75 (334)
                      .
T Consensus       110 ~  110 (182)
T d1vj0a2         110 D  110 (182)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.24  E-value=0.0018  Score=49.27  Aligned_cols=31  Identities=32%  Similarity=0.575  Sum_probs=26.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC-CCeEEEEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALV   31 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~-g~~V~~~~   31 (334)
                      |||.|.||||++|+.|++.|.++ ..++..+.
T Consensus         2 ikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~   33 (179)
T d2g17a1           2 LNTLIVGASGYAGAELVSYVNRHPHMTITALT   33 (179)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             cEEEEECcccHHHHHHHHHHHhCCCCceEeeE
Confidence            58999999999999999999986 45665543

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.19  E-value=0.0081  Score=45.82  Aligned_cols=92  Identities=15%  Similarity=0.029  Sum_probs=59.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~   80 (334)
                      ++|.|.| .|.||+.+++.|..-|.+|++.++.......     ...       ..+.+.++++.+|+|+-++.....  
T Consensus        45 ~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~-----~~~-------~~~~l~ell~~sDii~i~~plt~~--  109 (188)
T d1sc6a1          45 KKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKLPLG-----NAT-------QVQHLSDLLNMSDVVSLHVPENPS--  109 (188)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCCT-----TCE-------ECSCHHHHHHHCSEEEECCCSSTT--
T ss_pred             eEEEEee-cccchhhhhhhcccccceEeeccccccchhh-----hhh-------hhhhHHHHHhhccceeecccCCcc--
Confidence            3688887 9999999999999999999999986543221     111       113567788889988877754322  


Q ss_pred             CCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccce
Q 019878           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA  118 (334)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v  118 (334)
                        ...++.      ...++.+++   ...+|.+|-..+
T Consensus       110 --T~~li~------~~~l~~mk~---~a~lIN~aRG~l  136 (188)
T d1sc6a1         110 --TKNMMG------AKEISLMKP---GSLLINASRGTV  136 (188)
T ss_dssp             --TTTCBC------HHHHHHSCT---TEEEEECSCSSS
T ss_pred             --hhhhcc------HHHHhhCCC---CCEEEEcCcHHh
Confidence              111222      345555543   237888875433

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.18  E-value=0.0017  Score=41.59  Aligned_cols=35  Identities=26%  Similarity=0.227  Sum_probs=31.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~   37 (334)
                      +|.|.| +|++|+.++..-.+.|+++++++-+++..
T Consensus         3 ~vgIlG-~GQLgrMl~~Aa~~LG~~v~vldp~~~~p   37 (78)
T d3etja2           3 QVCVLG-NGQLGRMLRQAGEPLGIAVWPVGLDAEPA   37 (78)
T ss_dssp             EEEEEB-CSHHHHHHHHHHGGGTEEEEEECTTSCGG
T ss_pred             EEEEEc-CCHHHHHHHHHHHHcCCEEEEEcCCCCCc
Confidence            589999 89999999999999999999999776543

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.17  E-value=0.0058  Score=46.30  Aligned_cols=60  Identities=25%  Similarity=0.233  Sum_probs=46.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      ++|.|.| .|-||+.+++.|..-|.+|++.+|++.....              .-.+++.+++..+|+|+.+...
T Consensus        43 k~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~~~~~--------------~~~~~l~ell~~sDiv~~~~pl  102 (181)
T d1qp8a1          43 EKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPKEGPW--------------RFTNSLEEALREARAAVCALPL  102 (181)
T ss_dssp             CEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCCCSSS--------------CCBSCSHHHHTTCSEEEECCCC
T ss_pred             ceEEEec-cccccccceeeeeccccccccccccccccce--------------eeeechhhhhhccchhhccccc
Confidence            4689999 8999999999999999999999988653221              1122467899999999977653

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.11  E-value=0.0021  Score=48.69  Aligned_cols=70  Identities=17%  Similarity=0.164  Sum_probs=49.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCC-CeEEEEcCCCChhhHHHHhcCCCEEEEec
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEG-ALELVYGDVTDYRSLVDACFGCHVIFHTA   73 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~v~~~~~Dl~d~~~~~~~~~~~d~vih~a   73 (334)
                      +|-|.| .|..|+.+++.|++.|++|++.+|++++.+.+.... ...... .....+++.+.+..+|.++-+.
T Consensus         4 nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~-~a~~~~~~~~~~~~~~~ii~~~   74 (176)
T d2pgda2           4 DIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVL-GAHSLEEMVSKLKKPRRIILLV   74 (176)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCE-ECSSHHHHHHHBCSSCEEEECS
T ss_pred             cEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhcccccccc-chhhhhhhhhhhcccceEEEec
Confidence            478888 899999999999999999999999886543221110 000000 1345677788888899888775

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.08  E-value=0.001  Score=50.14  Aligned_cols=74  Identities=16%  Similarity=0.190  Sum_probs=47.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCCCCeEEEEcCCCCh-hhHHHHh--cCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDY-RSLVDAC--FGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~-~~~~~~~--~~~d~vih~a~~   75 (334)
                      +|+|.|++|-+|...++.+...| .+|+++++++.+.+...+.+--..+..+-.|. +.+.+..  .++|+||.+++.
T Consensus        30 ~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~~d~vid~~g~  107 (170)
T d1jvba2          30 TLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNS  107 (170)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESCCC
T ss_pred             EEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeeccCCcCHHHHHHHHhhcccchhhhccccc
Confidence            58999999999999999999888 58888888876543222211113333332232 2222222  238999999873

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=95.94  E-value=0.0017  Score=46.48  Aligned_cols=68  Identities=18%  Similarity=0.161  Sum_probs=52.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHH-hcCCCEEEEec
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDA-CFGCHVIFHTA   73 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~vih~a   73 (334)
                      .|+|.| -|-+|+.+++.|.  +++|.+++.++.....+.. .++.++.||.++++.+.++ +++++.+|-+.
T Consensus         2 HivI~G-~g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~-~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~   70 (129)
T d2fy8a1           2 HVVICG-WSESTLECLRELR--GSEVFVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVNL   70 (129)
T ss_dssp             CEEEES-CCHHHHHHHHTSC--GGGEEEEESCTTHHHHHHH-TTCEEEESCTTSHHHHHHTTCTTCSEEEECC
T ss_pred             EEEEEC-CCHHHHHHHHHHc--CCCCEEEEcchHHHHHHHh-cCccccccccCCHHHHHHhhhhcCcEEEEec
Confidence            478888 6889999999994  5678888887765433322 3789999999999988876 45688888554

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.88  E-value=0.025  Score=45.00  Aligned_cols=101  Identities=17%  Similarity=0.183  Sum_probs=60.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCC------------------------CCeEEEEcCCC-C
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSE------------------------GALELVYGDVT-D   55 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~------------------------~~v~~~~~Dl~-d   55 (334)
                      ||+|.| .|.+|++++..|...|. +++++|.+.-...++..+                        +.++....+.. +
T Consensus        32 ~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~~~~~  110 (247)
T d1jw9b_          32 RVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALLD  110 (247)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCCC
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhhhhhh
Confidence            699999 88899999999999994 777777654332222221                        23333332221 2


Q ss_pred             hhhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceec
Q 019878           56 YRSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALG  120 (334)
Q Consensus        56 ~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~  120 (334)
                      .+.....+...|+|+.+.               .|...-..+-++|.++ ++ .+|+.+....+|
T Consensus       111 ~~~~~~~~~~~divid~~---------------d~~~~~~~in~~~~~~-~i-p~i~g~~~~~~g  158 (247)
T d1jw9b_         111 DAELAALIAEHDLVLDCT---------------DNVAVRNQLNAGCFAA-KV-PLVSGAAIRMEG  158 (247)
T ss_dssp             HHHHHHHHHTSSEEEECC---------------SSHHHHHHHHHHHHHH-TC-CEEEEEEEBTEE
T ss_pred             hccccccccccceeeecc---------------chhhhhhhHHHHHHHh-CC-Cccccccccccc
Confidence            344455556677777653               2333444666777776 43 577766555554

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.81  E-value=0.035  Score=39.23  Aligned_cols=84  Identities=17%  Similarity=0.157  Sum_probs=57.1

Q ss_pred             cEEEEcCC---ChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccC
Q 019878            2 KILVSGAS---GYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVE   77 (334)
Q Consensus         2 ~ilItG~t---G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~   77 (334)
                      +|.|.|++   |..|..+.+.|.+.| ++|+.+..+.+...      +...+ -++.|      +-..+|.++-+..   
T Consensus        10 sIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~------G~~~y-~sl~d------lp~~vDlvvi~vp---   73 (129)
T d2csua1          10 GIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQ------GVKAY-KSVKD------IPDEIDLAIIVVP---   73 (129)
T ss_dssp             EEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEET------TEECB-SSTTS------CSSCCSEEEECSC---
T ss_pred             eEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccC------CeEee-cchhh------cCCCCceEEEecC---
Confidence            59999998   999999999998766 68887765543322      22322 24433      3346888886643   


Q ss_pred             CCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecc
Q 019878           78 PWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (334)
Q Consensus        78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss  115 (334)
                                   -..+..+++.|.+. +++.++.+|+
T Consensus        74 -------------~~~~~~~~~~~~~~-g~~~~vi~s~   97 (129)
T d2csua1          74 -------------KRFVKDTLIQCGEK-GVKGVVIITA   97 (129)
T ss_dssp             -------------HHHHHHHHHHHHHH-TCCEEEECCC
T ss_pred             -------------hHHhHHHHHHHHHc-CCCEEEEecc
Confidence                         22345778888887 6888888876

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.80  E-value=0.0039  Score=47.19  Aligned_cols=36  Identities=28%  Similarity=0.422  Sum_probs=33.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~   37 (334)
                      |||-|.| .|..|..+++.|++.|++|.+.+|++++.
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~   37 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKS   37 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHH
T ss_pred             CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence            8999998 99999999999999999999999976543

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=95.76  E-value=0.0024  Score=48.90  Aligned_cols=71  Identities=21%  Similarity=0.227  Sum_probs=46.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC-------CCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL-------PSEGALELVYGDVTDYRSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~   74 (334)
                      ||.|.| +|..|++++..|.+.|++|.+.+|+++..+.+       .-.+++++ .-++.-...+.++++++|+||-+..
T Consensus         9 KI~ViG-aG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l-~~~i~~t~~l~~a~~~ad~iiiavP   86 (189)
T d1n1ea2           9 KAVVFG-SGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQL-ASNITFTSDVEKAYNGAEIILFVIP   86 (189)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBC-CTTEEEESCHHHHHTTCSCEEECSC
T ss_pred             eEEEEC-CCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhccccccccccccc-ccccccchhhhhccCCCCEEEEcCc
Confidence            599999 89999999999999999999999865321100       00011111 1122222347788889999987653

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.73  E-value=0.0022  Score=49.10  Aligned_cols=71  Identities=24%  Similarity=0.217  Sum_probs=43.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEE-EEcCCCCCCCCC-CCCCeEEEEcCCCChh---hHHHHh-cCCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRA-LVRRTSDISGLP-SEGALELVYGDVTDYR---SLVDAC-FGCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~-~~~~v~~~~~Dl~d~~---~~~~~~-~~~d~vih~a~   74 (334)
                      +|||+||+|-+|+..++.....|.++++ +++++++...+. ....-..+  |..+.+   .+.++. +++|+|+.+.|
T Consensus        33 tVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~vi--~~~~~~~~~~~~~~~~~GvDvv~D~vG  109 (187)
T d1vj1a2          33 TMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAV--NYKTGNVAEQLREACPGGVDVYFDNVG  109 (187)
T ss_dssp             EEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEEE--ETTSSCHHHHHHHHCTTCEEEEEESSC
T ss_pred             EEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEEe--eccchhHHHHHHHHhccCceEEEecCC
Confidence            4999999999999999999989976554 455433321111 11112222  444322   223332 24999999987

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.56  E-value=0.031  Score=38.46  Aligned_cols=90  Identities=19%  Similarity=0.171  Sum_probs=59.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC-CCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~   80 (334)
                      +|||.| +|-+|..-++.|++.|.+|++++....+.. .+....++++...+..+.     -+.+++.|+-+.+.     
T Consensus        14 ~vlVvG-~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----dl~~~~lv~~at~d-----   82 (113)
T d1pjqa1          14 DCLIVG-GGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDET-----LLDSCWLAIAATDD-----   82 (113)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGG-----GGTTCSEEEECCSC-----
T ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCceeeccCCCHH-----HhCCCcEEeecCCC-----
Confidence            699999 899999999999999999999887554211 111223677777666542     24667777755321     


Q ss_pred             CCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecc
Q 019878           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSS  115 (334)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss  115 (334)
                        .        .-...+.+.|++. +  .+|++..
T Consensus        83 --~--------~~n~~i~~~a~~~-~--ilVNv~D  104 (113)
T d1pjqa1          83 --D--------TVNQRVSDAAESR-R--IFCNVVD  104 (113)
T ss_dssp             --H--------HHHHHHHHHHHHT-T--CEEEETT
T ss_pred             --H--------HHHHHHHHHHHHc-C--CEEEeCC
Confidence              1        1124677788876 3  5676553

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.45  E-value=0.0058  Score=44.86  Aligned_cols=63  Identities=19%  Similarity=0.258  Sum_probs=43.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEe
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHT   72 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~   72 (334)
                      |||.+.| +|-+|+++++.|++.| ++|.+.+|++++.+.+....++... -|..       .+.++|+||-+
T Consensus         1 MkI~fIG-~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~-~~~~-------~v~~~Div~la   64 (152)
T d1yqga2           1 MNVYFLG-GGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETS-ATLP-------ELHSDDVLILA   64 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEE-SSCC-------CCCTTSEEEEC
T ss_pred             CEEEEEc-CcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccccc-cccc-------cccccceEEEe
Confidence            9999998 6999999999998876 9999999987654433322234332 1211       13567888744

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.39  E-value=0.029  Score=48.39  Aligned_cols=70  Identities=26%  Similarity=0.340  Sum_probs=45.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCC------------------------C--CeEEEEcCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSE------------------------G--ALELVYGDV   53 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~------------------------~--~v~~~~~Dl   53 (334)
                      +||||.|+ |.+|+.+++.|...|. +++++|.+.-...++..+                        +  ++..+..++
T Consensus        38 ~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~~i  116 (426)
T d1yovb1          38 CKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKI  116 (426)
T ss_dssp             CCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEECSCG
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeeeccc
Confidence            47999995 6699999999999995 788888754322222111                        1  345555555


Q ss_pred             CChhhHHHHhcCCCEEEEec
Q 019878           54 TDYRSLVDACFGCHVIFHTA   73 (334)
Q Consensus        54 ~d~~~~~~~~~~~d~vih~a   73 (334)
                      .+..  ...++++|+||.+.
T Consensus       117 ~~~~--~~~~~~~DlVi~~~  134 (426)
T d1yovb1         117 QDFN--DTFYRQFHIIVCGL  134 (426)
T ss_dssp             GGBC--HHHHTTCSEEEECC
T ss_pred             cchH--HHHHHhcchheecc
Confidence            4433  35667788888664

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=95.37  E-value=0.012  Score=41.34  Aligned_cols=35  Identities=20%  Similarity=0.347  Sum_probs=31.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~   37 (334)
                      +|+|.| +|++|..++..|.++|.+|+++.+++...
T Consensus        32 ~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~~~l   66 (121)
T d1d7ya2          32 RLLIVG-GGVIGLELAATARTAGVHVSLVETQPRLM   66 (121)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred             eEEEEC-cchhHHHHHHHhhcccceEEEEeeccccc
Confidence            578888 89999999999999999999999987643

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=95.34  E-value=0.016  Score=38.66  Aligned_cols=68  Identities=16%  Similarity=0.233  Sum_probs=47.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC-CCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-GLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      ++|.+.|..|--=++||+.|.++|++|.+-|+...... .+.+ .++++..++-.      +.+.++|.||...+.
T Consensus         9 ~~ihfiGigG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~-~Gi~v~~g~~~------~~i~~~d~vV~S~AI   77 (96)
T d1p3da1           9 QQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQ-AGAKIYIGHAE------EHIEGASVVVVSSAI   77 (96)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHH-TTCEEEESCCG------GGGTTCSEEEECTTS
T ss_pred             CEEEEEEECHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHH-CCCeEEECCcc------ccCCCCCEEEECCCc
Confidence            36888886666558899999999999999998754221 1222 26776665422      234678999988775

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=95.33  E-value=0.014  Score=44.79  Aligned_cols=93  Identities=18%  Similarity=0.101  Sum_probs=59.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~   80 (334)
                      ++|.|.| .|-||+.+++.|..-|.+|++.++........    .+.        ..++.++++.+|+|+.+......  
T Consensus        46 ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~----~~~--------~~~l~~l~~~~D~v~~~~plt~~--  110 (199)
T d1dxya1          46 QTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMKGDHP----DFD--------YVSLEDLFKQSDVIDLHVPGIEQ--  110 (199)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSSCCT----TCE--------ECCHHHHHHHCSEEEECCCCCGG--
T ss_pred             eeeeeee-cccccccccccccccceeeeccCCccchhhhc----chh--------HHHHHHHHHhcccceeeeccccc--
Confidence            3688888 99999999999999999999999876543211    122        22467778889988877643211  


Q ss_pred             CCcccchhhhhHHHHHHHHHHHhcCCCcEEEEeccccee
Q 019878           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL  119 (334)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~  119 (334)
                        ...++.      ...++.+++   ...+|.+|-..+.
T Consensus       111 --T~~li~------~~~l~~mk~---~a~lIN~aRG~vv  138 (199)
T d1dxya1         111 --NTHIIN------EAAFNLMKP---GAIVINTARPNLI  138 (199)
T ss_dssp             --GTTSBC------HHHHHHSCT---TEEEEECSCTTSB
T ss_pred             --cccccc------HHHhhccCC---ceEEEecccHhhh
Confidence              111111      344444443   3478888854443

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=95.29  E-value=0.0017  Score=48.71  Aligned_cols=64  Identities=14%  Similarity=0.246  Sum_probs=43.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      +|||.| +|..|++++..|.+.|. +|.++.|+.++...+...-+...+. ++.        ..++|+|||+-..
T Consensus        19 ~vlIlG-aGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~~-~~~--------~~~~DliINaTpi   83 (167)
T d1npya1          19 KVIVHG-SGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYIN-SLE--------NQQADILVNVTSI   83 (167)
T ss_dssp             CEEEEC-SSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEES-CCT--------TCCCSEEEECSST
T ss_pred             eEEEEC-CCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhhh-ccc--------ccchhhheecccc
Confidence            699999 69999999999999995 7999999876543322111122221 111        1358999998764

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=95.23  E-value=0.0018  Score=48.73  Aligned_cols=67  Identities=18%  Similarity=0.283  Sum_probs=45.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      ++|||.| +|..+++++..|.+.|.+|+++.|+.++...+    .....++.+  ++.+.     ...++|+|||+...
T Consensus        19 k~vlIlG-aGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~--~~~~~-----~~~~~dliIN~Tp~   89 (170)
T d1nyta1          19 LRILLIG-AGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQAL--SMDEL-----EGHEFDLIINATSS   89 (170)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEEC--CSGGG-----TTCCCSEEEECCSC
T ss_pred             CEEEEEC-CcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhccccccc--ccccc-----cccccceeeccccc
Confidence            3699999 58889999999999999999999987653321    111123332  22221     12468999999865

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=95.23  E-value=0.052  Score=40.30  Aligned_cols=100  Identities=12%  Similarity=0.105  Sum_probs=56.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC-CCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccC-C
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVE-P   78 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~-~   78 (334)
                      |||.|.| +|.+|+..++.|.+. +.+++++....+....     ......     ..+.....+++|+|+.+..... .
T Consensus         4 irvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~~~~~-----~~~~~~-----~~~~~~~~~~~D~Vvi~tp~~~h~   72 (170)
T d1f06a1           4 IRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRATLDT-----KTPVFD-----VADVDKHADDVDVLFLCMGSATDI   72 (170)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSCCSS-----SSCEEE-----GGGGGGTTTTCSEEEECSCTTTHH
T ss_pred             ceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEeccccccc-----cccccc-----chhhhhhccccceEEEeCCCcccH
Confidence            4689998 799999999999875 5677765443332211     111111     1223445567999998875411 0


Q ss_pred             --------CCCC---cccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           79 --------WLPD---PSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        79 --------~~~~---~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                              ...+   .+.....+......+.++|++. +  +.++++
T Consensus        73 ~~a~~aL~aG~~vv~~~~~~~~~~~~~~~l~~~A~~~-~--~~~~i~  116 (170)
T d1f06a1          73 PEQAPKFAQFACTVDTYDNHRDIPRHRQVMNEAATAA-G--NVALVS  116 (170)
T ss_dssp             HHHHHHHTTTSEEECCCCCGGGHHHHHHHHHHHHHHH-T--CEEECS
T ss_pred             HHHHHHHHCCCcEEEecCccccCHHHHHHHHHHHHhc-C--ceEEEe
Confidence                    0001   1123345556666777777775 3  444444

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.18  E-value=0.006  Score=46.88  Aligned_cols=63  Identities=17%  Similarity=0.004  Sum_probs=46.0

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      ++|.|.| .|.||+.+++.|..-|.+|++.++.......           .+....+++.+++..+|+|+.+...
T Consensus        44 k~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~-----------~~~~~~~~l~~~l~~sDii~~~~pl  106 (197)
T d1j4aa1          44 QVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPELE-----------KKGYYVDSLDDLYKQADVISLHVPD  106 (197)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHH-----------HTTCBCSCHHHHHHHCSEEEECSCC
T ss_pred             CeEEEec-ccccchhHHHhHhhhcccccccCcccccccc-----------cceeeeccccccccccccccccCCc
Confidence            3688999 9999999999999999999999876542111           0111234577788889988877653

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.11  E-value=0.02  Score=39.75  Aligned_cols=34  Identities=29%  Similarity=0.381  Sum_probs=31.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~   36 (334)
                      +++|.| +|++|..++..|.+.|.+|+++.|.+.-
T Consensus        24 ~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~i   57 (117)
T d1ebda2          24 SLVVIG-GGYIGIELGTAYANFGTKVTILEGAGEI   57 (117)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             eEEEEC-CCccceeeeeeecccccEEEEEEeccee
Confidence            588888 8999999999999999999999998764

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=95.10  E-value=0.0037  Score=47.04  Aligned_cols=73  Identities=18%  Similarity=0.143  Sum_probs=45.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc--CCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~vih~a~~   75 (334)
                      +|||.| +|.+|...++.+...|. .|+++++++.+.+...+....+++..+=.+.+...+...  ++|+||.++|.
T Consensus        35 ~vli~G-aG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~g~d~vid~~g~  110 (172)
T d1h2ba2          35 YVAIVG-VGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGS  110 (172)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSCHHHHHHHHTTTCCEEEEEESSCC
T ss_pred             EEEEeC-CChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCcccHHHHHHHhhCCCCceEEEEecCc
Confidence            488887 59999999999988774 667777776544332222223444333222333344332  48999999973

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=95.10  E-value=0.017  Score=40.03  Aligned_cols=34  Identities=21%  Similarity=0.338  Sum_probs=30.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~   36 (334)
                      ||+|.| +|++|..++..|.+.|.+|+++.|.+..
T Consensus        23 ~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~~   56 (116)
T d1gesa2          23 RVAVVG-AGYIGVELGGVINGLGAKTHLFEMFDAP   56 (116)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             EEEEEC-CChhhHHHHHHhhccccEEEEEeecchh
Confidence            588888 8999999999999999999999998754

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.09  E-value=0.074  Score=37.71  Aligned_cols=72  Identities=11%  Similarity=0.129  Sum_probs=46.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhC-CCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQ-GHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEPWL   80 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~   80 (334)
                      ||.|.|++|-.|+.+++.+.+. ++++.+..-..+                   +..  .....++|+||.+...     
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~-------------------~~~--~~~~~~~DvvIDFS~p-----   54 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD-------------------PLS--LLTDGNTEVVIDFTHP-----   54 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC-------------------CTH--HHHTTTCSEEEECCCT-----
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC-------------------chh--hhccccCCEEEEcccH-----
Confidence            7999999999999999998764 566665431111                   001  1112468999988532     


Q ss_pred             CCcccchhhhhHHHHHHHHHHHhcCCCcEEEE
Q 019878           81 PDPSRFFAVNVEGLKNVVQAAKETKTVEKIIY  112 (334)
Q Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~  112 (334)
                                 .++...++.|.++ ++ .+|.
T Consensus        55 -----------~~~~~~~~~~~~~-~~-~~Vi   73 (135)
T d1yl7a1          55 -----------DVVMGNLEFLIDN-GI-HAVV   73 (135)
T ss_dssp             -----------TTHHHHHHHHHHT-TC-EEEE
T ss_pred             -----------HHHHHHHHHHHhc-CC-CEEE
Confidence                       1345778888887 44 4443

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=95.09  E-value=0.0011  Score=49.34  Aligned_cols=71  Identities=15%  Similarity=0.249  Sum_probs=54.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCC--CCeEEEEcCCCChhhHHHHhcCCCEEEEecccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSE--GALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~   76 (334)
                      +|+|.| .|-.|..-++.....|.+|.+++.+.+....+...  ..+++.   ..+.+.+.+.+.++|+||.++-..
T Consensus        34 ~V~ViG-aGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~---~~~~~~l~~~~~~aDivI~aalip  106 (168)
T d1pjca1          34 KVVILG-GGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELL---YSNSAEIETAVAEADLLIGAVLVP  106 (168)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEE---ECCHHHHHHHHHTCSEEEECCCCT
T ss_pred             EEEEEC-CChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceee---hhhhhhHHHhhccCcEEEEeeecC
Confidence            689999 89999999999999999999999987654322211  133433   346778899999999999998653

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.08  E-value=0.017  Score=40.51  Aligned_cols=35  Identities=14%  Similarity=0.226  Sum_probs=31.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~   37 (334)
                      +++|.| +|+||-.++..|.+.|.+|+++.+.+.-.
T Consensus        25 ~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~~~~~~l   59 (122)
T d1v59a2          25 RLTIIG-GGIIGLEMGSVYSRLGSKVTVVEFQPQIG   59 (122)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred             eEEEEC-CCchHHHHHHHHHhhCcceeEEEeccccc
Confidence            588898 89999999999999999999999987643

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.08  E-value=0.0068  Score=45.12  Aligned_cols=70  Identities=21%  Similarity=0.165  Sum_probs=44.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChh---hHHHHhcCCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYR---SLVDACFGCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~---~~~~~~~~~d~vih~a~   74 (334)
                      +|+|.|+ |.+|...++.+...|.+|+++++++.+.+...+..-.+++  |..+.+   .+.+...+.+.+|-+++
T Consensus        30 ~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~Ga~~~i--~~~~~~~~~~~~~~~~g~~~~i~~~~  102 (166)
T d1llua2          30 WVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLTV--NARQEDPVEAIQRDIGGAHGVLVTAV  102 (166)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEE--ETTTSCHHHHHHHHHSSEEEEEECCS
T ss_pred             EEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhhccCccccc--cccchhHHHHHHHhhcCCcccccccc
Confidence            5899885 9999999999999999999999987654332222112333  333332   23333445566665544

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.04  E-value=0.018  Score=40.03  Aligned_cols=34  Identities=26%  Similarity=0.375  Sum_probs=30.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~   36 (334)
                      +|+|.| +|++|-.++..|.+.|.+|+++.|.+.-
T Consensus        24 ~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~i   57 (117)
T d1onfa2          24 KIGIVG-SGYIAVELINVIKRLGIDSYIFARGNRI   57 (117)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSSSS
T ss_pred             EEEEEC-CchHHHHHHHHHHhccccceeeehhccc
Confidence            688888 8999999999999999999999998754

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.04  E-value=0.0071  Score=46.44  Aligned_cols=34  Identities=38%  Similarity=0.423  Sum_probs=29.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~   36 (334)
                      |||.|.| .|++|..++..| ++|++|++++.++..
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~~   34 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPSK   34 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHHH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHHH
Confidence            9999997 999999999766 579999999987654

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=94.94  E-value=0.023  Score=39.53  Aligned_cols=34  Identities=26%  Similarity=0.272  Sum_probs=31.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~   36 (334)
                      +++|.| +|+||-.++..|.+.|.+|+++.++..-
T Consensus        24 ~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~~~l   57 (119)
T d3lada2          24 KLGVIG-AGVIGLELGSVWARLGAEVTVLEAMDKF   57 (119)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             eEEEEC-CChHHHHHHHHHHHcCCceEEEEeeccc
Confidence            588999 8999999999999999999999998764

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=94.84  E-value=0.0048  Score=46.47  Aligned_cols=71  Identities=17%  Similarity=0.141  Sum_probs=43.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEE-EEEcCCCCCCCCCCCCCeEEEEcCCCChhh---HHHHhc-CCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVR-ALVRRTSDISGLPSEGALELVYGDVTDYRS---LVDACF-GCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~-~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~---~~~~~~-~~d~vih~a~~   75 (334)
                      +|||.|+ |.+|...++.+...|.+++ +.++++.+.+...+..-.+++  |..+.+.   +.++.. ++|+||.+.|.
T Consensus        31 ~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i--~~~~~~~~~~i~~~t~gg~D~vid~~G~  106 (174)
T d1f8fa2          31 SFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVI--NSKTQDPVAAIKEITDGGVNFALESTGS  106 (174)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEE--ETTTSCHHHHHHHHTTSCEEEEEECSCC
T ss_pred             EEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEE--eCCCcCHHHHHHHHcCCCCcEEEEcCCc
Confidence            5899986 9999999999988887654 556555443322221122444  3333322   233333 38999999873

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.81  E-value=0.018  Score=40.37  Aligned_cols=31  Identities=32%  Similarity=0.404  Sum_probs=28.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRR   33 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~   33 (334)
                      +++|.| +|+||-.++..|.+.|.+|+++.|+
T Consensus        22 ~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          22 KTLVVG-ASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             eEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence            588888 8999999999999999999999875

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=94.74  E-value=0.0092  Score=45.66  Aligned_cols=65  Identities=17%  Similarity=0.090  Sum_probs=46.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      ++|.|.| .|-||+.+++.|..-|.+|.+.++.........         .++...+++.+++..+|+|+.+...
T Consensus        50 ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~---------~~~~~~~~l~~ll~~sD~i~~~~pl  114 (193)
T d1mx3a1          50 ETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVERA---------LGLQRVSTLQDLLFHSDCVTLHCGL  114 (193)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHH---------HTCEECSSHHHHHHHCSEEEECCCC
T ss_pred             ceEEEec-cccccccceeeeeccccceeeccCcccccchhh---------hccccccchhhccccCCEEEEeecc
Confidence            3688888 999999999999999999999988755321100         0112234567788889988777654

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.73  E-value=0.021  Score=40.04  Aligned_cols=34  Identities=29%  Similarity=0.459  Sum_probs=30.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~   36 (334)
                      +|+|.| +|++|..++..|.+.|.+|+++.+.+..
T Consensus        32 ~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~~~   65 (123)
T d1nhpa2          32 NVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILDRP   65 (123)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             EEEEEC-ChHHHHHHHHHhhccceEEEEEEecCcc
Confidence            578887 8999999999999999999999998654

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=94.71  E-value=0.0043  Score=46.77  Aligned_cols=71  Identities=13%  Similarity=0.139  Sum_probs=46.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCCeEEEEcCCCCh---hhHHHHhc--CCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDY---RSLVDACF--GCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~---~~~~~~~~--~~d~vih~a~~   75 (334)
                      +|||.|+ |.+|...++.+...|. +|+++++++.+.+...+.+-.+++  |..+.   +.+.+...  ++|+||.++|.
T Consensus        30 ~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i--~~~~~~~~~~v~~~t~g~G~D~vid~~g~  106 (174)
T d1jqba2          30 SVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDIL--NYKNGHIEDQVMKLTNGKGVDRVIMAGGG  106 (174)
T ss_dssp             CEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEE--CGGGSCHHHHHHHHTTTSCEEEEEECSSC
T ss_pred             EEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHhhCccccc--cccchhHHHHHHHHhhccCcceEEEccCC
Confidence            5899985 9999999999999996 788988877543322111111222  33332   33444443  39999999974

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.62  E-value=0.027  Score=39.54  Aligned_cols=35  Identities=17%  Similarity=0.426  Sum_probs=31.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~   37 (334)
                      +++|.| +|++|-.++..|.+.|.+|+++.|++.-.
T Consensus        24 ~vvIvG-gG~iG~E~A~~l~~~G~~Vtlv~~~~~~l   58 (125)
T d3grsa2          24 RSVIVG-AGYIAVEMAGILSALGSKTSLMIRHDKVL   58 (125)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred             EEEEEc-CCccHHHHHHHHhcCCcEEEEEeeccccc
Confidence            588998 89999999999999999999999987643

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.60  E-value=0.013  Score=44.74  Aligned_cols=102  Identities=13%  Similarity=0.218  Sum_probs=61.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCC-----------CCCe----------EEEEcCCCChhhHH
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPS-----------EGAL----------ELVYGDVTDYRSLV   60 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----------~~~v----------~~~~~Dl~d~~~~~   60 (334)
                      ||.|.|+ |.+|+.++..++..|++|++.+++++..+....           ....          .-....+.-..++.
T Consensus         6 kvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~d~~   84 (192)
T d1f0ya2           6 HVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAA   84 (192)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHHHHHHHHHhhhhccchhhHHHHHHHHhhccccchhH
Confidence            6999995 999999999999999999999998753211000           0000          00000111122345


Q ss_pred             HHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEeccccee
Q 019878           61 DACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFAL  119 (334)
Q Consensus        61 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~  119 (334)
                      .++.++|.||-+..      +        |+..=+.++....+. ..+..|+.|+++..
T Consensus        85 ~a~~~ad~ViEav~------E--------~l~~K~~v~~~l~~~-~~~~~ilasnTS~l  128 (192)
T d1f0ya2          85 SVVHSTDLVVEAIV------E--------NLKVKNELFKRLDKF-AAEHTIFASNTSSL  128 (192)
T ss_dssp             HHTTSCSEEEECCC------S--------CHHHHHHHHHHHTTT-SCTTCEEEECCSSS
T ss_pred             hhhcccceehhhcc------c--------chhHHHHHHHHHhhh-cccCceeeccCccc
Confidence            66778999997764      1        233335667666665 34456666655433

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=94.56  E-value=0.011  Score=44.39  Aligned_cols=73  Identities=18%  Similarity=0.160  Sum_probs=51.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCC----------------------CChhhH
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDV----------------------TDYRSL   59 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl----------------------~d~~~~   59 (334)
                      +|+|.| .|-.|.+-++-....|.+|.+++.+....+.+.+. .-+++..+.                      ...+.+
T Consensus        31 ~VvViG-aGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l-~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~~l  108 (183)
T d1l7da1          31 RVLVFG-VGVAGLQAIATAKRLGAVVMATDVRAATKEQVESL-GGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAV  108 (183)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHT-TCEECCC-----------------------CCHHHHH
T ss_pred             EEEEEc-CcHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHh-hcceEEEeccccccccccccchhhcCHHHHHHHHHHH
Confidence            589999 89999999999999999999999988765443322 222322211                      123456


Q ss_pred             HHHhcCCCEEEEecccc
Q 019878           60 VDACFGCHVIFHTAALV   76 (334)
Q Consensus        60 ~~~~~~~d~vih~a~~~   76 (334)
                      .+.+.++|+||-.+-..
T Consensus       109 ~~~l~~aDlVI~talip  125 (183)
T d1l7da1         109 LKELVKTDIAITTALIP  125 (183)
T ss_dssp             HHHHTTCSEEEECCCCT
T ss_pred             HHHHHhhhhheeeeecC
Confidence            66778899999888653

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=94.53  E-value=0.015  Score=47.18  Aligned_cols=34  Identities=26%  Similarity=0.379  Sum_probs=31.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~   35 (334)
                      |+|+|.| +|.-|...+.+|.++|++|.++.+++.
T Consensus         1 m~V~IIG-aG~aGL~aA~~L~~~G~~V~vlE~~~~   34 (347)
T d2ivda1           1 MNVAVVG-GGISGLAVAHHLRSRGTDAVLLESSAR   34 (347)
T ss_dssp             CCEEEEC-CBHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred             CeEEEEC-CCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence            9999999 599999999999999999999988754

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=94.51  E-value=0.018  Score=44.00  Aligned_cols=71  Identities=11%  Similarity=0.079  Sum_probs=46.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCCeEEEEcCCCCh---hhHHHHhc--CCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTDY---RSLVDACF--GCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~---~~~~~~~~--~~d~vih~a~~   75 (334)
                      +|||.| +|-+|...++.+...|. +|+++++++.+.+...+. +...+. |..+.   +.+.++..  ++|++|.+.|.
T Consensus        28 tVlV~G-aG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~-Ga~~~~-~~~~~~~~~~i~~~t~g~g~D~vid~vG~  104 (195)
T d1kola2          28 TVYVAG-AGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ-GFEIAD-LSLDTPLHEQIAALLGEPEVDCAVDAVGF  104 (195)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT-TCEEEE-TTSSSCHHHHHHHHHSSSCEEEEEECCCT
T ss_pred             EEEEEC-cCHHHHHHHHHHHhhcccceeeecccchhhHhhhhc-cccEEE-eCCCcCHHHHHHHHhCCCCcEEEEECccc
Confidence            589998 59999988888877775 788888877654322222 334332 33332   23344443  48999999984

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=94.50  E-value=0.019  Score=40.14  Aligned_cols=33  Identities=24%  Similarity=0.486  Sum_probs=29.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~   35 (334)
                      +++|.| +|++|-.++..|.+.|.+|+++.|++.
T Consensus        34 ~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          34 EAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             EEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             cEEEEC-CcHHHHHHHHHhhcccceEEEEecccc
Confidence            578888 899999999999999999999988754

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=94.38  E-value=0.044  Score=42.04  Aligned_cols=73  Identities=19%  Similarity=0.132  Sum_probs=45.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCC-C-CCCC-------CCeEEEE-cCCCChhhHHHHhc-CCCEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDIS-G-LPSE-------GALELVY-GDVTDYRSLVDACF-GCHVI   69 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~-~~~~-------~~v~~~~-~Dl~d~~~~~~~~~-~~d~v   69 (334)
                      |||++.| ++-.|..+.+.|.+.|++|.++.-.+++.. . ....       .++.++. .++.+.+.++.+.+ ++|++
T Consensus         1 Mkiv~~~-~~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~i~~~~~Dli   79 (203)
T d2blna2           1 MKTVVFA-YHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWVERIAQLSPDVI   79 (203)
T ss_dssp             CEEEEEE-CHHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCSHHHHHHHHHTCCSEE
T ss_pred             CeEEEEe-cCHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHHHcCCcceecccccchhhhhhhhhhcccce
Confidence            9999997 566899999999999999987654333211 1 1010       2455544 35555554433332 58988


Q ss_pred             EEecc
Q 019878           70 FHTAA   74 (334)
Q Consensus        70 ih~a~   74 (334)
                      +-+.+
T Consensus        80 i~~g~   84 (203)
T d2blna2          80 FSFYY   84 (203)
T ss_dssp             EEESC
T ss_pred             eeeec
Confidence            87764

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=94.36  E-value=0.025  Score=39.04  Aligned_cols=34  Identities=32%  Similarity=0.444  Sum_probs=30.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~   36 (334)
                      +++|.| +|++|-.++..|.+.|.+|+++.+.+.-
T Consensus        23 ~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~~i   56 (115)
T d1lvla2          23 HLVVVG-GGYIGLELGIAYRKLGAQVSVVEARERI   56 (115)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             eEEEEC-CCHHHHHHHHHHhhcccceEEEeeeccc
Confidence            577887 8999999999999999999999988754

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=94.27  E-value=0.013  Score=43.94  Aligned_cols=73  Identities=15%  Similarity=0.036  Sum_probs=46.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCCeEEEEcCCCC--hhhHHHHh--cCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTD--YRSLVDAC--FGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d--~~~~~~~~--~~~d~vih~a~~   75 (334)
                      +|||.| +|.+|...++.+...|. +|+++++++.+.+...+..-..++...-.|  .+......  .++|+||.+.+.
T Consensus        30 ~VlV~G-aGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~~d~~~~~~~~~~~~~G~d~vid~~g~  107 (174)
T d1p0fa2          30 TCAVFG-LGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGR  107 (174)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCC
T ss_pred             EEEEEC-CCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCCCchhHHHHHHHHhcCCCCcEEEEcCCC
Confidence            589998 59999999999999885 788888887765433222222333211112  12233333  249999999873

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=94.23  E-value=0.073  Score=39.06  Aligned_cols=55  Identities=20%  Similarity=0.234  Sum_probs=44.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVE   77 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~   77 (334)
                      ++|+|.|-+..+|+.|+..|.++|.+|+.+.....                      .+.+...+.|+||.++|...
T Consensus        38 K~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~----------------------~l~~~~~~ADivI~a~G~p~   92 (166)
T d1b0aa1          38 LNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK----------------------NLRHHVENADLLIVAVGKPG   92 (166)
T ss_dssp             CEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS----------------------CHHHHHHHCSEEEECSCCTT
T ss_pred             ceEEEEeccccccHHHHHHHHHhhccccccccccc----------------------hhHHHHhhhhHhhhhccCcc
Confidence            36899999999999999999999999987754432                      13556678999999998643

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=94.14  E-value=0.035  Score=39.41  Aligned_cols=35  Identities=23%  Similarity=0.419  Sum_probs=31.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~   37 (334)
                      +|+|.| +|++|-.++..|.+.|.+|+++.+.+...
T Consensus        37 ~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~~~l   71 (133)
T d1q1ra2          37 RLVVIG-GGYIGLEVAATAIKANMHVTLLDTAARVL   71 (133)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred             EEEEEC-CchHHHHHHHHHHhhCcceeeeeeccccc
Confidence            588998 89999999999999999999999987643

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=94.03  E-value=0.024  Score=45.53  Aligned_cols=31  Identities=23%  Similarity=0.354  Sum_probs=29.2

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEEcCC
Q 019878            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (334)
Q Consensus         3 ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~   34 (334)
                      |+|.| +|..|.+++.+|+++|++|.++.+..
T Consensus         7 vvIIG-aGi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIG-GGIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            99999 89999999999999999999999864

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=93.94  E-value=0.028  Score=39.38  Aligned_cols=35  Identities=23%  Similarity=0.385  Sum_probs=31.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~   37 (334)
                      +++|.| +|+||-.++..|.+.|.+|+++.|++...
T Consensus        27 ~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~~~~l   61 (123)
T d1dxla2          27 KLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFASEIV   61 (123)
T ss_dssp             EEEESC-CSHHHHHHHHHHHHHTCEEEEECSSSSSS
T ss_pred             eEEEEc-cchHHHHHHHHHHhcCCeEEEEEEccccC
Confidence            578888 89999999999999999999999988754

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=93.91  E-value=0.014  Score=43.76  Aligned_cols=73  Identities=16%  Similarity=0.139  Sum_probs=45.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCCCCeEEE-EcCCCC-hhhHHHHh--cCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELV-YGDVTD-YRSLVDAC--FGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~v~~~-~~Dl~d-~~~~~~~~--~~~d~vih~a~~   75 (334)
                      +|||.|+ |.+|...+..+...| .+|+++++++++.+...+......+ ..|-.+ .....+..  .++|++|.+.|.
T Consensus        31 tVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vid~~G~  108 (176)
T d2jhfa2          31 TCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGR  108 (176)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCC
T ss_pred             EEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecCCchhHHHHHHHHHhcCCCCEEEecCCc
Confidence            5999998 569999999999887 5888888887764432222112222 112222 22222332  359999999874

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=93.89  E-value=0.15  Score=35.08  Aligned_cols=82  Identities=26%  Similarity=0.306  Sum_probs=53.8

Q ss_pred             cEEEEcCC---ChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCC
Q 019878            2 KILVSGAS---GYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (334)
Q Consensus         2 ~ilItG~t---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~   78 (334)
                      +|.|.|++   +-.|..+.+.|++.||+|+.+..+.+...      +..       -..++.++-+.+|.++-+..    
T Consensus         3 sIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~------G~~-------~y~sl~~lp~~~D~vvi~vp----   65 (116)
T d1y81a1           3 KIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIE------GLK-------CYRSVRELPKDVDVIVFVVP----   65 (116)
T ss_dssp             EEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEET------TEE-------CBSSGGGSCTTCCEEEECSC----
T ss_pred             EEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEcccccccc------Ccc-------ccccchhccccceEEEEEeC----
Confidence            68999988   77999999999999999887754332211      222       22333444456888775532    


Q ss_pred             CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEe
Q 019878           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYT  113 (334)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  113 (334)
                                  -..+..+++.|.+. +++.+++-
T Consensus        66 ------------~~~~~~~l~~~~~~-g~k~v~~~   87 (116)
T d1y81a1          66 ------------PKVGLQVAKEAVEA-GFKKLWFQ   87 (116)
T ss_dssp             ------------HHHHHHHHHHHHHT-TCCEEEEC
T ss_pred             ------------HHHHHHHHHHHHhc-CCceEEec
Confidence                        22345777788887 67766543

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=93.89  E-value=0.12  Score=36.85  Aligned_cols=83  Identities=18%  Similarity=0.139  Sum_probs=55.4

Q ss_pred             cEEEEcCC---ChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccccCC
Q 019878            2 KILVSGAS---GYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALVEP   78 (334)
Q Consensus         2 ~ilItG~t---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~   78 (334)
                      +|.|.|++   +-.|..+++.|.+.||+|+.+........      +...       ..++.++-..+|.|+-+..    
T Consensus        21 sIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~------G~~~-------~~sl~dlp~~iD~v~i~vp----   83 (139)
T d2d59a1          21 KIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVL------GRKC-------YPSVLDIPDKIEVVDLFVK----   83 (139)
T ss_dssp             EEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEET------TEEC-------BSSGGGCSSCCSEEEECSC----
T ss_pred             eEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccC------CCcc-------cccccccCccceEEEEEeC----
Confidence            59999998   78999999999999999887764433221      2222       2223334456887775543    


Q ss_pred             CCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           79 WLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                                  -..+..+++.|.+. +++.+++-+
T Consensus        84 ------------~~~~~~~~~e~~~~-g~k~v~~~~  106 (139)
T d2d59a1          84 ------------PKLTMEYVEQAIKK-GAKVVWFQY  106 (139)
T ss_dssp             ------------HHHHHHHHHHHHHH-TCSEEEECT
T ss_pred             ------------HHHHHHHHHHHHHh-CCCEEEEec
Confidence                        23456788888887 677766544

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=93.84  E-value=0.034  Score=43.95  Aligned_cols=32  Identities=34%  Similarity=0.498  Sum_probs=30.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~   34 (334)
                      ||+|.| +|..|...+..|+++|++|.++.|..
T Consensus         8 kVvVIG-aGiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           8 RVVVLG-SGVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             cEEEEC-ccHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            699999 89999999999999999999999865

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=93.82  E-value=0.008  Score=45.08  Aligned_cols=66  Identities=17%  Similarity=0.184  Sum_probs=45.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCC----CCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGL----PSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      +|+|.| +|..+++++..|.+.+.+|+++.|+.++...+    ....++.....|-       ..+.++|+|||+...
T Consensus        20 ~vlIlG-aGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~-------~~~~~~diiIN~tp~   89 (171)
T d1p77a1          20 HVLILG-AGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDS-------IPLQTYDLVINATSA   89 (171)
T ss_dssp             EEEEEC-CSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG-------CCCSCCSEEEECCCC
T ss_pred             EEEEEC-CcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhcc-------ccccccceeeecccc
Confidence            689998 67779999999999889999999987653322    1111333333331       124579999999865

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=93.75  E-value=0.018  Score=43.73  Aligned_cols=66  Identities=17%  Similarity=0.053  Sum_probs=45.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      ++|.|.| .|-||+.+++.|..-|.+|...++..........        ..+....++.++++.+|+|+-+...
T Consensus        45 ~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~--------~~~~~~~~l~~~l~~sD~v~~~~pl  110 (188)
T d2naca1          45 MHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKE--------LNLTWHATREDMYPVCDVVTLNCPL  110 (188)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHH--------HTCEECSSHHHHGGGCSEEEECSCC
T ss_pred             cceeecc-ccccchhhhhhhhccCceEEEEeecccccccccc--------ccccccCCHHHHHHhccchhhcccc
Confidence            3577887 9999999999999999999999987543211000        0112234466778889988766543

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=93.69  E-value=0.025  Score=42.87  Aligned_cols=34  Identities=21%  Similarity=0.291  Sum_probs=30.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~   36 (334)
                      ||.|.|+ |.+|+.++..++..|++|++.+++++.
T Consensus         6 ~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~   39 (186)
T d1wdka3           6 QAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHG   39 (186)
T ss_dssp             SEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence            6999995 999999999999999999999997653

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=93.54  E-value=0.039  Score=39.97  Aligned_cols=33  Identities=27%  Similarity=0.381  Sum_probs=27.6

Q ss_pred             Cc-EEEEcCCChhhHHHHHHHHhC--CCeEEEEEcC
Q 019878            1 MK-ILVSGASGYLGGRLCHALLKQ--GHSVRALVRR   33 (334)
Q Consensus         1 m~-ilItG~tG~iG~~l~~~L~~~--g~~V~~~~r~   33 (334)
                      || |.|.|+||.||.....-+.+.  .++|.+++-.
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~   36 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAG   36 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEES
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEec
Confidence            65 999999999999999999875  3677777654

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=93.52  E-value=0.025  Score=42.31  Aligned_cols=73  Identities=15%  Similarity=0.100  Sum_probs=45.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCCeEEEEcCCCC--hhhHHHHh--cCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGDVTD--YRSLVDAC--FGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d--~~~~~~~~--~~~d~vih~a~~   75 (334)
                      +|+|.| +|.||...++.+...|. .|++.++++.+.+...+..-..++...-.|  .....+..  .++|+||.+.|.
T Consensus        31 ~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~d~vie~~G~  108 (174)
T d1e3ia2          31 TCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGT  108 (174)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCC
T ss_pred             EEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCccchhhhhhhHhhhhcCCCcEEEEeccc
Confidence            589997 69999999999999997 577778777654322221112233211111  12222222  359999999873

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=93.51  E-value=0.067  Score=37.03  Aligned_cols=35  Identities=17%  Similarity=0.120  Sum_probs=30.9

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~   37 (334)
                      +|+|.| +|++|..++..|.+.|.+|.++.|.+.-.
T Consensus        24 ~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~~~l   58 (121)
T d1mo9a2          24 TVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTEPLK   58 (121)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCTTT
T ss_pred             EEEEEC-CCHHHHHHHHHHHhcchhheEeeccchhh
Confidence            578887 89999999999999999999999987543

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=93.50  E-value=0.048  Score=43.25  Aligned_cols=35  Identities=23%  Similarity=0.200  Sum_probs=31.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~   36 (334)
                      +||+|.| +|.-|..++..|.++|++|+++.|++..
T Consensus         5 ~kV~IiG-aG~aGl~~A~~L~~~G~~v~v~Er~~~~   39 (265)
T d2voua1           5 DRIAVVG-GSISGLTAALMLRDAGVDVDVYERSPQP   39 (265)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CcEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence            4899999 8999999999999999999999987654

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.44  E-value=0.035  Score=42.26  Aligned_cols=33  Identities=24%  Similarity=0.274  Sum_probs=28.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhC--CCeEEEEEcCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQ--GHSVRALVRRT   34 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~--g~~V~~~~r~~   34 (334)
                      |||+|.| +|++|-.++..|.+.  +.+|+++.|.+
T Consensus         1 ~KVvIIG-gG~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLG-SSHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEEC-SSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            9999999 789999999999876  46788888764

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=93.39  E-value=0.049  Score=38.20  Aligned_cols=35  Identities=17%  Similarity=0.285  Sum_probs=31.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~   37 (334)
                      +++|.| +|+||-.++..|.+.|.+|+++.+.+.-.
T Consensus        28 ~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~~~~il   62 (125)
T d1ojta2          28 KLLIIG-GGIIGLEMGTVYSTLGSRLDVVEMMDGLM   62 (125)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHHTCEEEEECSSSSSS
T ss_pred             eEEEEC-CCHHHHHHHHHhhcCCCEEEEEEeecccc
Confidence            588898 89999999999999999999999987543

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.26  E-value=0.018  Score=42.70  Aligned_cols=70  Identities=19%  Similarity=0.123  Sum_probs=45.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCCh---hhHHHHhcCCCEEEEecc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDY---RSLVDACFGCHVIFHTAA   74 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~---~~~~~~~~~~d~vih~a~   74 (334)
                      +|||.| +|-+|...++.+...|.+|+++++++.+....++. ++..+. |..+.   +.+.....+.+.+|.+++
T Consensus        30 ~vlv~G-~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~-Ga~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~  102 (168)
T d1rjwa2          30 WVAIYG-IGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKEL-GADLVV-NPLKEDAAKFMKEKVGGVHAAVVTAV  102 (168)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-TCSEEE-CTTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred             EEEEee-cccchhhhhHHHhcCCCeEeccCCCHHHhhhhhhc-Ccceec-ccccchhhhhcccccCCCceEEeecC
Confidence            588887 59999999999999999999999887654333222 333332 22222   234444456666666654

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=93.19  E-value=0.024  Score=42.39  Aligned_cols=73  Identities=14%  Similarity=0.068  Sum_probs=42.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCCCCCCCCCCCCeEEEEcC--CCChhhHHHHh--cCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTSDISGLPSEGALELVYGD--VTDYRSLVDAC--FGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~v~~~~~D--l~d~~~~~~~~--~~~d~vih~a~~   75 (334)
                      +|||.|+ |.+|...++.+...|. .|+++++++.+.+...+..-..++..+  -.+.....+..  .++|+||.+.|.
T Consensus        31 tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~~~~~~~~~~~~~~~~~g~D~vid~~G~  108 (176)
T d2fzwa2          31 VCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGN  108 (176)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCC
T ss_pred             EEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCCchhhHHHHHHHHHcCCCCcEeeecCCC
Confidence            5899987 6789999999999885 566666666543322221112222111  11222222222  349999999873

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=93.16  E-value=0.06  Score=37.76  Aligned_cols=93  Identities=13%  Similarity=0.121  Sum_probs=58.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHh-CCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcC-CCEEEEeccccCCC
Q 019878            2 KILVSGASGYLGGRLCHALLK-QGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFG-CHVIFHTAALVEPW   79 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-~d~vih~a~~~~~~   79 (334)
                      +|+|.| +|.+|..|++++.. .+++++++..+.+.... ....++..+.     .+.+.+..++ ++.++-+...    
T Consensus         5 ~v~I~G-aG~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G-~~I~Gi~V~~-----~~~l~~~~~~~i~iai~~i~~----   73 (126)
T d2dt5a2           5 GLCIVG-MGRLGSALADYPGFGESFELRGFFDVDPEKVG-RPVRGGVIEH-----VDLLPQRVPGRIEIALLTVPR----   73 (126)
T ss_dssp             EEEEEC-CSHHHHHHHHCSCCCSSEEEEEEEESCTTTTT-CEETTEEEEE-----GGGHHHHSTTTCCEEEECSCH----
T ss_pred             eEEEEc-CCHHHHHHHHhHhhcCCcEEEEEEeCchHhcC-CEECCEEEec-----HHHHHHHHhhcccEEEEeCCH----
Confidence            588999 89999999998764 47888887665443221 1112566653     3345555543 5555544321    


Q ss_pred             CCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccce
Q 019878           80 LPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFA  118 (334)
Q Consensus        80 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v  118 (334)
                                  ...+.+++.|.++ +++.+..++....
T Consensus        74 ------------~~~~~I~d~l~~~-gIk~I~~f~~~~l   99 (126)
T d2dt5a2          74 ------------EAAQKAADLLVAA-GIKGILNFAPVVL   99 (126)
T ss_dssp             ------------HHHHHHHHHHHHH-TCCEEEECSSSCC
T ss_pred             ------------HHHHHHHHHHHHc-CCCEEeecCceee
Confidence                        2235788888888 7888887765443

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=93.11  E-value=0.15  Score=34.96  Aligned_cols=70  Identities=14%  Similarity=0.096  Sum_probs=49.2

Q ss_pred             cEEEEcCCC----------hhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc--CCCEE
Q 019878            2 KILVSGASG----------YLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG----------~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~v   69 (334)
                      ||||.|+..          +-+.+.++.|.+.|++++.+..++.....-..  -..-+...-...+.+.++++  ++|.|
T Consensus         6 kvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d--~aD~lYfeplt~e~v~~Ii~~E~p~~i   83 (121)
T d1a9xa4           6 KIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYD--TSDRLYFEPVTLEDVLEIVRIEKPKGV   83 (121)
T ss_dssp             EEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTT--SSSEEECCCCSHHHHHHHHHHHCCSEE
T ss_pred             EEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChh--hcCceEEccCCHHHHHHHHHHhCCCEE
Confidence            699999744          67889999999999999999888875432111  22334445566777887764  58877


Q ss_pred             EEec
Q 019878           70 FHTA   73 (334)
Q Consensus        70 ih~a   73 (334)
                      +-.-
T Consensus        84 i~~~   87 (121)
T d1a9xa4          84 IVQY   87 (121)
T ss_dssp             ECSS
T ss_pred             Eeeh
Confidence            6443

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=93.02  E-value=0.17  Score=40.76  Aligned_cols=32  Identities=22%  Similarity=0.207  Sum_probs=28.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~   34 (334)
                      ||+|-| .|.+|+++++.|.+.|.+|++++-+.
T Consensus        38 tvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD~~   69 (293)
T d1hwxa1          38 TFAVQG-FGNVGLHSMRYLHRFGAKCVAVGESD   69 (293)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             EEEEEC-CCHHHHHHHHHHHHCCCEEEEEEccc
Confidence            688888 79999999999999999999987654

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=93.01  E-value=0.16  Score=38.80  Aligned_cols=73  Identities=19%  Similarity=0.232  Sum_probs=47.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCC----CCCC--------CCeEEEEcCCCChhhHHHHhc--CC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISG----LPSE--------GALELVYGDVTDYRSLVDACF--GC   66 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~--------~~v~~~~~Dl~d~~~~~~~~~--~~   66 (334)
                      |||++.| ++..+..+.+.|.+.|++|.++...+++...    +...        .++.+...+..+.+...+.++  ++
T Consensus         4 mKI~f~G-~~~~~~~~L~~L~~~~~~i~~Vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (206)
T d1fmta2           4 LRIIFAG-TPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVAELQA   82 (206)
T ss_dssp             CEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCSCSHHHHHHHHHTTC
T ss_pred             cEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEeCCCcccccCccccccchhhhhhccCccccccccccchhhHHHHhhhcc
Confidence            9999998 6788999999999999998876644332111    1100        245565555555555555554  47


Q ss_pred             CEEEEecc
Q 019878           67 HVIFHTAA   74 (334)
Q Consensus        67 d~vih~a~   74 (334)
                      |+++-+.+
T Consensus        83 d~~v~~~~   90 (206)
T d1fmta2          83 DVMVVVAY   90 (206)
T ss_dssp             SEEEEESC
T ss_pred             eEEEeecc
Confidence            87776655

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=92.92  E-value=0.025  Score=42.99  Aligned_cols=65  Identities=15%  Similarity=0.009  Sum_probs=45.1

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      ++.|.| .|-||+.+++.|..-|.+|.+.++..........        ......+++.+++..+|+|+-+...
T Consensus        49 tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~--------~~~~~~~~l~~ll~~sD~v~l~~pl  113 (191)
T d1gdha1          49 TLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEAS--------YQATFHDSLDSLLSVSQFFSLNAPS  113 (191)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHH--------HTCEECSSHHHHHHHCSEEEECCCC
T ss_pred             ceEEee-cccchHHHHHHHHhhccccccccccccccchhhc--------ccccccCCHHHHHhhCCeEEecCCC
Confidence            578888 9999999999999999999998876543211000        0111224577788889988766654

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.92  E-value=0.0076  Score=47.55  Aligned_cols=27  Identities=30%  Similarity=0.474  Sum_probs=24.7

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEE
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVR   28 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~   28 (334)
                      |||+|.| +|.+|..++.+|+++|++|+
T Consensus         1 mkV~VIG-aGi~GlstA~~L~~~G~~v~   27 (246)
T d1kifa1           1 MRVVVIG-AGVIGLSTALCIHERYHSVL   27 (246)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHHTTTS
T ss_pred             CEEEEEC-chHHHHHHHHHHHHCCCCce
Confidence            9999999 89999999999999997643

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.81  E-value=0.21  Score=36.69  Aligned_cols=53  Identities=17%  Similarity=0.206  Sum_probs=43.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEecccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAALV   76 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~   76 (334)
                      +|.|.|-+..+|+.|+..|+++|..|..+......                      +.+...+.|+||.++|..
T Consensus        41 ~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~----------------------l~~~~~~aDivi~a~G~~   93 (170)
T d1a4ia1          41 HAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAH----------------------LDEEVNKGDILVVATGQP   93 (170)
T ss_dssp             EEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSS----------------------HHHHHTTCSEEEECCCCT
T ss_pred             eEEEEecCCccchHHHHHHHhccCceEEEeccccc----------------------HHHHHhhccchhhccccc
Confidence            68999999999999999999999999887765432                      345567899999988863

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=92.75  E-value=0.058  Score=44.45  Aligned_cols=34  Identities=32%  Similarity=0.617  Sum_probs=31.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~   35 (334)
                      +||+|.| +|+-|...|..|+++|++|.++.++..
T Consensus         3 KKI~IIG-aG~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           3 KKILIVG-AGFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            4799999 899999999999999999999988765

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=92.67  E-value=0.031  Score=41.90  Aligned_cols=73  Identities=15%  Similarity=0.135  Sum_probs=46.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCCCCeEEEE-cCCCC-hhhHHHHh--cCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVY-GDVTD-YRSLVDAC--FGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~v~~~~-~Dl~d-~~~~~~~~--~~~d~vih~a~~   75 (334)
                      +|+|+| +|-+|...++.+...| .+|+++++++++.+...+..-..++. -|-.+ ...+.+..  .++|++|.+.+.
T Consensus        32 tVlI~G-~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~~~~~~~~~~~~~~~g~G~d~vi~~~g~  109 (176)
T d1d1ta2          32 TCVVFG-LGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGH  109 (176)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHHTSCCCEEEECSCC
T ss_pred             EEEEEC-CCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECccccchHHHHHHHHhccccceEEEEeCCc
Confidence            489998 5999999999999998 58999999887644222111112221 12111 22233333  359999999874

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.58  E-value=0.033  Score=42.06  Aligned_cols=63  Identities=21%  Similarity=0.115  Sum_probs=44.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      ++.|.| .|.||+.+++.|..-|.+|++.++...+......  .++        ..++.+++.++|+|+-+...
T Consensus        46 ~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~--~~~--------~~~l~ell~~sDiv~~~~Pl  108 (184)
T d1ygya1          46 TVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQL--GIE--------LLSLDDLLARADFISVHLPK  108 (184)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHH--TCE--------ECCHHHHHHHCSEEEECCCC
T ss_pred             eeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHHhhc--Cce--------eccHHHHHhhCCEEEEcCCC
Confidence            567777 9999999999999999999999876543211000  111        23466788889988877654

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=92.51  E-value=0.011  Score=44.24  Aligned_cols=106  Identities=14%  Similarity=0.112  Sum_probs=65.2

Q ss_pred             CcEEEEcCCChhhHH--HHHHHHhC----CCeEEEEEcCCCCCCC-----------CCCCCCeEEEEcCCCChhhHHHHh
Q 019878            1 MKILVSGASGYLGGR--LCHALLKQ----GHSVRALVRRTSDISG-----------LPSEGALELVYGDVTDYRSLVDAC   63 (334)
Q Consensus         1 m~ilItG~tG~iG~~--l~~~L~~~----g~~V~~~~r~~~~~~~-----------~~~~~~v~~~~~Dl~d~~~~~~~~   63 (334)
                      |||.|.|| |.+|..  ++..|+..    +.+++.+++++++.+.           +..  ..++.     ...+..+++
T Consensus         3 mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~--~~~i~-----~~td~~eaL   74 (171)
T d1obba1           3 VKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGA--DLKFE-----KTMNLDDVI   74 (171)
T ss_dssp             CEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTC--CCEEE-----EESCHHHHH
T ss_pred             cEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCC--CeEEE-----EeCChhhcc
Confidence            89999995 888865  34445432    4689999998654321           111  12222     123356788


Q ss_pred             cCCCEEEEeccccCCC-------------------CC--C---c--ccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           64 FGCHVIFHTAALVEPW-------------------LP--D---P--SRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        64 ~~~d~vih~a~~~~~~-------------------~~--~---~--~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      .++|+|++.++.....                   ..  +   +  ......|+.-.+.+++...++..-..++.+|
T Consensus        75 ~dad~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~a~~i~~T  151 (171)
T d1obba1          75 IDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAA  151 (171)
T ss_dssp             TTCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             cCCCeEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcCeEEEEEC
Confidence            9999999998642110                   00  0   0  0112458889999999999985445677666

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=92.24  E-value=0.084  Score=36.77  Aligned_cols=71  Identities=21%  Similarity=0.305  Sum_probs=50.5

Q ss_pred             cEEEEcCCC----------hhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc--CCCEE
Q 019878            2 KILVSGASG----------YLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF--GCHVI   69 (334)
Q Consensus         2 ~ilItG~tG----------~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~v   69 (334)
                      ||||.|+..          +-+.+.++.|.+.|++++.+..++.....-..  -..-+...-.+.+.+.++++  ++|.|
T Consensus         9 kvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d--~aD~lYfePlt~e~v~~Ii~~E~pd~i   86 (127)
T d1a9xa3           9 SILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPE--MADATYIEPIHWEVVRKIIEKERPDAV   86 (127)
T ss_dssp             EEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGG--GSSEEECSCCCHHHHHHHHHHHCCSEE
T ss_pred             EEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChh--hcceeeeecCCHHHHHHHHHHhCcCCe
Confidence            699999744          56789999999999999999888775421111  12334456667888888875  59988


Q ss_pred             EEecc
Q 019878           70 FHTAA   74 (334)
Q Consensus        70 ih~a~   74 (334)
                      +-..|
T Consensus        87 l~~~G   91 (127)
T d1a9xa3          87 LPTMG   91 (127)
T ss_dssp             ECSSS
T ss_pred             EEEee
Confidence            85444

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.15  E-value=0.089  Score=39.53  Aligned_cols=34  Identities=18%  Similarity=0.202  Sum_probs=30.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH-SVRALVRRTS   35 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~   35 (334)
                      .||+|.| +|..|-..+..|.++|+ +|+++.|++.
T Consensus         5 ~kVaIIG-aGpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           5 AKIALLG-AGPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CEEEEEC-ChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            3799999 89999999999999998 5999998764

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.76  E-value=0.097  Score=41.66  Aligned_cols=35  Identities=29%  Similarity=0.346  Sum_probs=31.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSD   36 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~   36 (334)
                      |+|+|.| +|.-|..++..|.+.| ++|.++.+++..
T Consensus         2 ~~V~IvG-aG~aGl~~A~~L~~~Gi~~V~V~Er~~~~   37 (288)
T d3c96a1           2 IDILIAG-AGIGGLSCALALHQAGIGKVTLLESSSEI   37 (288)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESSSSC
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCCeEEEEeCCCCC
Confidence            7899999 8999999999999999 589999987653

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=91.74  E-value=0.11  Score=38.72  Aligned_cols=34  Identities=21%  Similarity=0.265  Sum_probs=31.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~   36 (334)
                      +|+|.| +|.-|-..+..|.++||+|+++.+.+.-
T Consensus        45 ~V~IIG-aGPAGL~AA~~la~~G~~Vtl~E~~~~~   78 (179)
T d1ps9a3          45 NLAVVG-AGPAGLAFAINAAARGHQVTLFDAHSEI   78 (179)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred             EEEEEC-ccHHHHHHHHHHHhhccceEEEeccCcc
Confidence            699999 8999999999999999999999998653

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.71  E-value=0.27  Score=39.63  Aligned_cols=29  Identities=34%  Similarity=0.311  Sum_probs=25.5

Q ss_pred             cCCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 019878            7 GASGYLGGRLCHALLKQGHSVRALVRRTS   35 (334)
Q Consensus         7 G~tG~iG~~l~~~L~~~g~~V~~~~r~~~   35 (334)
                      -.||-.|.+|++++..+|++|+.+.+...
T Consensus        43 ~SSGk~G~alA~~~~~~Ga~V~li~g~~s   71 (290)
T d1p9oa_          43 FSSGRRGATSAEAFLAAGYGVLFLYRARS   71 (290)
T ss_dssp             CCCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred             CCchHHHHHHHHHHHHcCCEEEEEecCCc
Confidence            35799999999999999999999987643

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.61  E-value=0.052  Score=48.19  Aligned_cols=102  Identities=9%  Similarity=0.069  Sum_probs=61.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCC-----------CCCCC-------------C--CeEEEEcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDIS-----------GLPSE-------------G--ALELVYGDVT   54 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~-----------~~~~~-------------~--~v~~~~~Dl~   54 (334)
                      +|+|.|+ |.+|..+++.|...| .++++++.+.-...           .+...             +  +++++..+..
T Consensus        27 ~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~~~~~~  105 (529)
T d1yova1          27 HVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESPE  105 (529)
T ss_dssp             EEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEESSCHH
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEEcCCch
Confidence            6999995 779999999999998 47777765432111           01000             1  2333333222


Q ss_pred             Ch-hhHHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCcEEEEecccceecc
Q 019878           55 DY-RSLVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVEKIIYTSSFFALGS  121 (334)
Q Consensus        55 d~-~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~  121 (334)
                      +. +...+.+.++|+||.+.               .|......+-+.|+++ ++ .||.++|.+.||.
T Consensus       106 ~~~~~~~~~~~~~dvVv~~~---------------~~~~~~~~l~~~c~~~-~i-p~i~~~~~G~~G~  156 (529)
T d1yova1         106 NLLDNDPSFFCRFTVVVATQ---------------LPESTSLRLADVLWNS-QI-PLLICRTYGLVGY  156 (529)
T ss_dssp             HHHHSCGGGGGGCSEEEEES---------------CCHHHHHHHHHHHHHH-TC-CEEEEEEETTEEE
T ss_pred             hhhhhHHHHhcCCCEEEECC---------------CCHHHHHHHHHHHHHc-CC-CEEEEeccCCEEE
Confidence            11 01123345678888553               2444456778888887 43 6888888888773

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.52  E-value=0.072  Score=42.99  Aligned_cols=34  Identities=35%  Similarity=0.374  Sum_probs=30.9

Q ss_pred             Cc--EEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 019878            1 MK--ILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (334)
Q Consensus         1 m~--ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~   35 (334)
                      ||  |+|.| +|..|..++..|.+.|++|.++.++++
T Consensus         1 mk~~V~IvG-aGp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           1 MKTQVAIIG-AGPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             CBCSEEEEC-CSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CCCCEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            65  99999 789999999999999999999998763

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=91.39  E-value=0.26  Score=39.18  Aligned_cols=32  Identities=25%  Similarity=0.271  Sum_probs=29.2

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 019878            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (334)
Q Consensus         3 ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~   35 (334)
                      |+|.| +|..|..++.+|+++|++|+++.+...
T Consensus         6 vvIIG-aGi~Gls~A~~La~~G~~V~viE~~~~   37 (281)
T d2gf3a1           6 VIVVG-AGSMGMAAGYQLAKQGVKTLLVDAFDP   37 (281)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            78888 899999999999999999999998653

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=91.19  E-value=0.096  Score=37.81  Aligned_cols=33  Identities=24%  Similarity=0.303  Sum_probs=27.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhC--CCeEEEEEcCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQ--GHSVRALVRRT   34 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~--g~~V~~~~r~~   34 (334)
                      +|.|.|+||.||....+-+.+.  .++|.+++-..
T Consensus         4 ~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~   38 (150)
T d1r0ka2           4 TVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR   38 (150)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC
Confidence            5999999999999999999875  37788776543

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.14  E-value=0.083  Score=38.17  Aligned_cols=32  Identities=22%  Similarity=0.308  Sum_probs=28.4

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRR   33 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~   33 (334)
                      ++|||.|| |.+|..-++.|++.|.+|++++..
T Consensus        14 krvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          14 KRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            36999995 999999999999999999999653

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=91.04  E-value=0.051  Score=40.23  Aligned_cols=108  Identities=8%  Similarity=0.066  Sum_probs=60.7

Q ss_pred             CcEEEEcCCChhhHH-HHHHHHhC-----CCeEEEEEcCCCCCCCCCCC---------CCeEEEEcCCCChhhHHHHhcC
Q 019878            1 MKILVSGASGYLGGR-LCHALLKQ-----GHSVRALVRRTSDISGLPSE---------GALELVYGDVTDYRSLVDACFG   65 (334)
Q Consensus         1 m~ilItG~tG~iG~~-l~~~L~~~-----g~~V~~~~r~~~~~~~~~~~---------~~v~~~~~Dl~d~~~~~~~~~~   65 (334)
                      +||.|.|| |.+|.. ++..|+.+     +.+++.++.++++.......         ...+...     ..+..+++++
T Consensus         4 ~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~eal~~   77 (167)
T d1u8xx1           4 FSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAA-----TTDPEEAFTD   77 (167)
T ss_dssp             EEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEE-----ESCHHHHHSS
T ss_pred             ceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEe-----cCChhhccCC
Confidence            37999997 445554 44455432     24799999877643210000         0122221     1235678899


Q ss_pred             CCEEEEeccccCCCCCCcccc--------------------hhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           66 CHVIFHTAALVEPWLPDPSRF--------------------FAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        66 ~d~vih~a~~~~~~~~~~~~~--------------------~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      +|+||..|+.........+..                    ...|+.....+++...++..-..++.+|
T Consensus        78 AD~Vvitag~~~~~g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~P~A~li~~T  146 (167)
T d1u8xx1          78 VDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYS  146 (167)
T ss_dssp             CSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CCEEEECCCcCCCCceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            999999998632110111111                    1235667778888888875445677666

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.00  E-value=0.03  Score=41.14  Aligned_cols=64  Identities=17%  Similarity=0.170  Sum_probs=45.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhcCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      +++|.| .|.||+.+++.|...|.+|.+.+.++.+.-.  .      . .|--....+.+++...|+||-+.|.
T Consensus        26 ~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~--A------~-~dG~~v~~~~~a~~~adivvtaTGn   89 (163)
T d1li4a1          26 VAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQ--A------A-MEGYEVTTMDEACQEGNIFVTTTGC   89 (163)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHH--H------H-HTTCEECCHHHHTTTCSEEEECSSC
T ss_pred             EEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHH--h------h-cCceEeeehhhhhhhccEEEecCCC
Confidence            577888 9999999999999999999999987643110  0      0 1222223456777788988877663

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=90.88  E-value=0.094  Score=42.73  Aligned_cols=33  Identities=24%  Similarity=0.424  Sum_probs=30.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~   35 (334)
                      .|+|.| +|.-|..+|+.|+++|++|.++.++..
T Consensus         3 dv~IIG-aG~sGl~~A~~L~~~g~~V~iiEk~~~   35 (298)
T d1i8ta1           3 DYIIVG-SGLFGAVCANELKKLNKKVLVIEKRNH   35 (298)
T ss_dssp             EEEEEC-CSHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred             cEEEEC-CcHHHHHHHHHHHhCCCcEEEEECCCC
Confidence            489999 899999999999999999999988764

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=90.70  E-value=0.068  Score=39.61  Aligned_cols=109  Identities=11%  Similarity=-0.010  Sum_probs=62.6

Q ss_pred             CcEEEEcC-CChhhHHHHHHHHhC----CCeEEEEEcCCCC--CCCCCC---------CCCeEEEEcCCCChhhHHHHhc
Q 019878            1 MKILVSGA-SGYLGGRLCHALLKQ----GHSVRALVRRTSD--ISGLPS---------EGALELVYGDVTDYRSLVDACF   64 (334)
Q Consensus         1 m~ilItG~-tG~iG~~l~~~L~~~----g~~V~~~~r~~~~--~~~~~~---------~~~v~~~~~Dl~d~~~~~~~~~   64 (334)
                      |||.|.|| +.+.+..++..++..    ..++..++.+++.  .+.+..         ..+.+..     ......+.++
T Consensus         2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~-----~~td~~~al~   76 (169)
T d1s6ya1           2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIH-----LTLDRRRALD   76 (169)
T ss_dssp             EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEE-----EESCHHHHHT
T ss_pred             cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceee-----ecCCchhhcC
Confidence            79999996 334455666655543    1488888887643  110000         0011111     1222456788


Q ss_pred             CCCEEEEeccccCC--CCCC----------------c--ccchhhhhHHHHHHHHHHHhcCCCcEEEEec
Q 019878           65 GCHVIFHTAALVEP--WLPD----------------P--SRFFAVNVEGLKNVVQAAKETKTVEKIIYTS  114 (334)
Q Consensus        65 ~~d~vih~a~~~~~--~~~~----------------~--~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  114 (334)
                      +.|+||..|+....  +..+                +  ......|+...+.+++.+.++..-..++.+|
T Consensus        77 gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~i~vt  146 (169)
T d1s6ya1          77 GADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFT  146 (169)
T ss_dssp             TCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CCCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEEEEeC
Confidence            99999999986321  0000                0  0122468888899999999985445666666

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=90.68  E-value=0.11  Score=39.06  Aligned_cols=35  Identities=9%  Similarity=0.161  Sum_probs=30.4

Q ss_pred             cEEE-EcCCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 019878            2 KILV-SGASGYLGGRLCHALLKQGHSVRALVRRTSD   36 (334)
Q Consensus         2 ~ilI-tG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~   36 (334)
                      +++| +||+|.+|...++.....|.+|+++.|+.+.
T Consensus        31 ~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~   66 (189)
T d1gu7a2          31 DWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN   66 (189)
T ss_dssp             CEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred             EEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccc
Confidence            3666 6999999999999999999999999987764

>d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain
species: Thermotoga maritima [TaxId: 2336]

Probab=90.48  E-value=0.18  Score=32.72  Aligned_cols=31  Identities=26%  Similarity=0.276  Sum_probs=26.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVR   32 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r   32 (334)
                      |||||.| +|.=-.++++.|.+..+++++..-
T Consensus         1 MkVLviG-sGgREHAia~~l~~s~~~v~~~pG   31 (90)
T d1vkza2           1 VRVHILG-SGGREHAIGWAFAKQGYEVHFYPG   31 (90)
T ss_dssp             CEEEEEE-CSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEEC-CCHHHHHHHHHHhcCCCeEEEecC
Confidence            9999999 777788999999988888887743

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.45  E-value=0.12  Score=40.07  Aligned_cols=32  Identities=22%  Similarity=0.303  Sum_probs=29.7

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 019878            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (334)
Q Consensus         3 ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~   35 (334)
                      |+|.| +|.-|...|..|+++|++|.++.+++.
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~~   39 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQDH   39 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence            78999 999999999999999999999998864

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=90.40  E-value=0.19  Score=36.35  Aligned_cols=33  Identities=15%  Similarity=0.284  Sum_probs=28.1

Q ss_pred             EEEE-cCCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 019878            3 ILVS-GASGYLGGRLCHALLKQGHSVRALVRRTS   35 (334)
Q Consensus         3 ilIt-G~tG~iG~~l~~~L~~~g~~V~~~~r~~~   35 (334)
                      ++|. .+.||+|..++..|.++|.+|+++.+.+.
T Consensus        42 vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          42 VVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             EEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             eEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            4444 35799999999999999999999999764

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=90.20  E-value=0.3  Score=32.79  Aligned_cols=34  Identities=15%  Similarity=0.031  Sum_probs=28.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~   35 (334)
                      ++|+|.| +|.=|.-++..|++...+++...|+..
T Consensus        33 K~VlVVG-~g~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          33 ESVLVVG-GASSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             CCEEEEC-SSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             CeEEEEC-CCCCHHHHHHHHHHhcCEEEEEEecCc
Confidence            5799999 889999999999988778777777654

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=90.05  E-value=0.093  Score=39.17  Aligned_cols=31  Identities=26%  Similarity=0.516  Sum_probs=25.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcC
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRR   33 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~   33 (334)
                      ||.|-| .|-||+.++|.|.+++ .+|+++...
T Consensus         3 KVaING-fGRIGR~v~Ral~~~~dievVaInd~   34 (178)
T d1b7go1           3 NVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKT   34 (178)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECS
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECC
Confidence            799998 8999999999999864 677776543

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=89.94  E-value=0.14  Score=41.42  Aligned_cols=32  Identities=25%  Similarity=0.570  Sum_probs=28.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRT   34 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~   34 (334)
                      +|+|.| +|.+|.+++.+|+++|. +|.+++|+.
T Consensus         3 dViIIG-aGi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIG-AGIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            589999 89999999999999995 699998875

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.94  E-value=0.18  Score=38.44  Aligned_cols=34  Identities=32%  Similarity=0.472  Sum_probs=29.2

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~   35 (334)
                      |||++.| ++..|..+.+.|.+.|++|.++...++
T Consensus         1 MkI~~~G-~~~~~~~~l~~L~~~~~~i~~V~t~p~   34 (203)
T d2bw0a2           1 MKIAVIG-QSLFGQEVYCHLRKEGHEVVGVFTVPD   34 (203)
T ss_dssp             CEEEEEC-CHHHHHHHHHHHHHTTCEEEEEEECCC
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHCCCcEEEEEcCCC
Confidence            9999998 678899999999999999997765443

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.91  E-value=0.3  Score=35.93  Aligned_cols=73  Identities=16%  Similarity=0.123  Sum_probs=49.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCC----CCCCCCCCCeEEEEcCC--CChhhHHHHhcCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSD----ISGLPSEGALELVYGDV--TDYRSLVDACFGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~----~~~~~~~~~v~~~~~Dl--~d~~~~~~~~~~~d~vih~a~~   75 (334)
                      +++|.|-+.-+|+.++..|+++|..|...+.....    ...+..   ......|+  ...+.+.+....+|+||..+|.
T Consensus        31 ~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~lk~~~~~aDIvIsavG~  107 (171)
T d1edza1          31 KCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKL---NKHHVEDLGEYSEDLLKKCSLDSDVVITGVPS  107 (171)
T ss_dssp             EEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSC---CCCEEEEEEECCHHHHHHHHHHCSEEEECCCC
T ss_pred             EEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceee---eeeccccccccchhHHhhccccCCEEEEccCC
Confidence            68999999999999999999999999877654211    000000   01111122  2355678888889999998886


Q ss_pred             cC
Q 019878           76 VE   77 (334)
Q Consensus        76 ~~   77 (334)
                      .+
T Consensus       108 p~  109 (171)
T d1edza1         108 EN  109 (171)
T ss_dssp             TT
T ss_pred             Cc
Confidence            43

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=89.87  E-value=0.74  Score=35.87  Aligned_cols=32  Identities=25%  Similarity=0.275  Sum_probs=28.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~   34 (334)
                      ||+|-| .|-+|+++++.|.+.|.+|++++.+.
T Consensus        33 ~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD~~   64 (242)
T d1v9la1          33 TVAIQG-MGNVGRWTAYWLEKMGAKVIAVSDIN   64 (242)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTTTCEEEEEECSS
T ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCeEEEeeccc
Confidence            688888 99999999999999999999887654

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=89.72  E-value=0.16  Score=40.78  Aligned_cols=34  Identities=21%  Similarity=0.227  Sum_probs=30.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~   35 (334)
                      +||+|.| +|.-|-..+.+|.+.|++|.++.+++.
T Consensus         2 KkV~IIG-aG~aGL~aA~~La~~G~~V~vlE~~~~   35 (373)
T d1seza1           2 KRVAVIG-AGVSGLAAAYKLKIHGLNVTVFEAEGK   35 (373)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHTTSCEEEEECSSSS
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            4799999 899999999999999999999987654

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=89.52  E-value=0.19  Score=38.16  Aligned_cols=64  Identities=22%  Similarity=0.265  Sum_probs=42.5

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHhc-CCCEEEEecc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDACF-GCHVIFHTAA   74 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-~~d~vih~a~   74 (334)
                      .||+|-| .|-+|+++++.|.+.|.+|++.+.+......... .+.+.+     +.   .+++. ++|+++-||.
T Consensus        28 k~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~-~g~~~~-----~~---~~~~~~~~DI~iPcA~   92 (201)
T d1c1da1          28 LTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAVA-LGHTAV-----AL---EDVLSTPCDVFAPCAM   92 (201)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCEEC-----CG---GGGGGCCCSEEEECSC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHHh-hccccc-----Cc---cccccccceeeecccc
Confidence            3688998 9999999999999999999988765443211110 022222     11   23443 5899998875

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=89.40  E-value=0.13  Score=38.36  Aligned_cols=32  Identities=19%  Similarity=0.182  Sum_probs=26.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~   34 (334)
                      +|+|.| +|++|-.++..|.+.|.++.++.+++
T Consensus         5 ~VvIIG-gG~~G~e~A~~l~~~g~~v~i~~~~~   36 (183)
T d1d7ya1           5 PVVVLG-AGLASVSFVAELRQAGYQGLITVVGD   36 (183)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHHTCCSCEEEEES
T ss_pred             CEEEEC-ccHHHHHHHHHHHhcCCceEEEEEec
Confidence            399999 89999999999999987776665544

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=89.32  E-value=0.14  Score=43.57  Aligned_cols=33  Identities=33%  Similarity=0.456  Sum_probs=26.4

Q ss_pred             CcEEEEcC------CChhh---HHHHHHHHhCCCeEEEEEcC
Q 019878            1 MKILVSGA------SGYLG---GRLCHALLKQGHSVRALVRR   33 (334)
Q Consensus         1 m~ilItG~------tG~iG---~~l~~~L~~~g~~V~~~~r~   33 (334)
                      ||||+.+.      +|.+|   .+|++.|.++||+|+++...
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~   42 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPS   42 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEecC
Confidence            99999764      35555   67799999999999998743

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=89.28  E-value=0.2  Score=36.97  Aligned_cols=33  Identities=15%  Similarity=0.297  Sum_probs=28.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~   35 (334)
                      +|+|.| +|++|-.++..|.+.|.+|.++.+.+.
T Consensus         5 ~VvIIG-gG~~G~e~A~~l~~~g~~v~v~~~~~~   37 (185)
T d1q1ra1           5 NVVIVG-TGLAGVEVAFGLRASGWEGNIRLVGDA   37 (185)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred             CEEEEC-CcHHHHHHHHHHHHcCCceEEEEecCc
Confidence            688888 899999999999999988877766654

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=88.56  E-value=1  Score=33.66  Aligned_cols=93  Identities=17%  Similarity=0.230  Sum_probs=61.3

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC---CeEEEEEcCCCCCCCCCCCCCeEEEEcCC-------------------CChhh
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG---HSVRALVRRTSDISGLPSEGALELVYGDV-------------------TDYRS   58 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl-------------------~d~~~   58 (334)
                      |||.|.| -|.-|.+++..|.+.+   .+.++++-+.......+.  ..+...+.-                   .+.+.
T Consensus         1 ~kI~viG-vGGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~~~a--~~ki~iG~~~t~G~G~g~~p~~g~~aa~e~~~~   77 (194)
T d1w5fa1           1 LKIKVIG-VGGAGNNAINRMIEIGIHGVEFVAVNTDLQVLEASNA--DVKIQIGENITRGLGAGGRPEIGEQAALESEEK   77 (194)
T ss_dssp             CCEEEEE-EHHHHHHHHHHHHHHCCTTEEEEEEESCHHHHHTCCC--SEEEECCTTTTTTSCCTTCHHHHHHHHHHTHHH
T ss_pred             CeEEEEE-eCchHHHHHHHHHHcCCCceEEEEEcCCHHHHhcCCc--ceEEecccccCCCcccccCchhhHhHHHHHHHH
Confidence            7999999 7889999999998865   344555544332222222  223333311                   12456


Q ss_pred             HHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCC
Q 019878           59 LVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTV  107 (334)
Q Consensus        59 ~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~  107 (334)
                      +.+.++++|.|+-+||....          +-..++-.+++.|++. ++
T Consensus        78 I~~~l~~~d~vfi~AGlGGg----------TGtgaapviA~~ake~-g~  115 (194)
T d1w5fa1          78 IREVLQDTHMVFITAGFGGG----------TGTGASPVIAKIAKEM-GI  115 (194)
T ss_dssp             HHHHTTTCSEEEEEEETTSS----------HHHHHHHHHHHHHHHT-TC
T ss_pred             HHHHhcCCCeEEEEEecCCC----------cccchHHHHHHHHHHc-CC
Confidence            77788899999999998553          3445666888889887 44

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=88.31  E-value=0.25  Score=38.33  Aligned_cols=33  Identities=21%  Similarity=0.382  Sum_probs=30.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~   35 (334)
                      +|+|.| +|..|-..+..|.++|++|+++.++..
T Consensus        51 ~VvIIG-aGpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          51 SVLIVG-AGPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             eEEEEc-ccHHHHHHHHHHHHhccceeeEeeccc
Confidence            589999 899999999999999999999988765

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=88.06  E-value=0.17  Score=41.18  Aligned_cols=33  Identities=24%  Similarity=0.388  Sum_probs=30.3

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~   35 (334)
                      ||+|.| +|.-|-..+.+|.++|++|.++.+++.
T Consensus        32 kV~IIG-aG~aGLsaA~~L~~~G~~V~vlE~~~~   64 (370)
T d2iida1          32 HVVIVG-AGMAGLSAAYVLAGAGHQVTVLEASER   64 (370)
T ss_dssp             EEEEEC-CBHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             eEEEEC-CCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            699999 899999999999999999999988654

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=87.68  E-value=0.25  Score=36.16  Aligned_cols=33  Identities=21%  Similarity=0.235  Sum_probs=27.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCC--eEEEEEcCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGH--SVRALVRRT   34 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~--~V~~~~r~~   34 (334)
                      .||+|.| +|+.|-.++..|.+.+.  +|+++.+++
T Consensus         3 krivIvG-gG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           3 RKVVVVG-GGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CcEEEEC-ccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            3799999 89999999999998774  677776654

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=87.68  E-value=0.24  Score=35.98  Aligned_cols=32  Identities=22%  Similarity=0.306  Sum_probs=27.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~   35 (334)
                      ||+|.| +|++|-.++..|.+ +.+|+++.+.+.
T Consensus         2 rVvIIG-gG~~G~e~A~~l~~-~~~Vtvv~~~~~   33 (167)
T d1xhca1           2 KVVIVG-NGPGGFELAKQLSQ-TYEVTVIDKEPV   33 (167)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTT-TSEEEEECSSSS
T ss_pred             eEEEEC-CcHHHHHHHHHHHc-CCCEEEEecccc
Confidence            789999 89999999999964 689999987653

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=87.66  E-value=0.17  Score=37.42  Aligned_cols=73  Identities=14%  Similarity=0.111  Sum_probs=43.6

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCCCCCCCCCeEEEEcCCC-C-hhhHHHHh--cCCCEEEEeccc
Q 019878            2 KILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDISGLPSEGALELVYGDVT-D-YRSLVDAC--FGCHVIFHTAAL   75 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~-d-~~~~~~~~--~~~d~vih~a~~   75 (334)
                      +|+|.|+ |-+|...+..+...| .+|+++++++.+.+...+..-.+++..+=. + .....+..  .++|+++.+.|.
T Consensus        31 ~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~~~~~~~~~~~~~~~~~G~d~vid~~G~  108 (175)
T d1cdoa2          31 TCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGN  108 (175)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSCC
T ss_pred             EEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCCCcchhHHHHHHhhccCCcceeeeecCC
Confidence            5899985 557777777777776 578888888765543332222233321111 1 12333333  359999999873

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=87.57  E-value=0.19  Score=37.15  Aligned_cols=73  Identities=18%  Similarity=0.188  Sum_probs=42.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC-CeEEEEEcCCCCCC--CCCCCCCeEEEEcCCCC-----------hhhHHHHhcCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG-HSVRALVRRTSDIS--GLPSEGALELVYGDVTD-----------YRSLVDACFGC   66 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~--~~~~~~~v~~~~~Dl~d-----------~~~~~~~~~~~   66 (334)
                      |||.|-| .|-||+.+++.|.++. .+++++....+...  .+.. .+...+..+-..           ...+..+.+++
T Consensus         3 irIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v   80 (172)
T d2czca2           3 VKVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKE-LGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKV   80 (172)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHH-TTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTC
T ss_pred             EEEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhh-cCceeecccccceeeecccCccccchhhhhhccC
Confidence            4699999 7999999999998764 56666543221110  0000 012222222211           12344455689


Q ss_pred             CEEEEeccc
Q 019878           67 HVIFHTAAL   75 (334)
Q Consensus        67 d~vih~a~~   75 (334)
                      |+||-|.|.
T Consensus        81 DvViEcTG~   89 (172)
T d2czca2          81 DIIVDATPG   89 (172)
T ss_dssp             SEEEECCST
T ss_pred             CEEEECCCC
Confidence            999999884

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=86.88  E-value=0.48  Score=32.25  Aligned_cols=34  Identities=15%  Similarity=0.246  Sum_probs=27.2

Q ss_pred             cEEEEcCCChhhHHHHHHHHh---CCCeEEEEEcCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLK---QGHSVRALVRRTSD   36 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~---~g~~V~~~~r~~~~   36 (334)
                      +++|.| +|++|-.++..|.+   +|.+|+++.|.+.-
T Consensus        22 ~v~ivG-gG~ig~E~A~~l~~l~~~~~~Vtli~~~~~i   58 (117)
T d1aoga2          22 RVLTVG-GGFISVEFAGIFNAYKPKDGQVTLCYRGEMI   58 (117)
T ss_dssp             EEEEEC-SSHHHHHHHHHHHHHCCTTCEEEEEESSSSS
T ss_pred             eEEEEC-CcHHHHHHHHHhhhcccCCcEEEEEeccchh
Confidence            588999 59999999977665   45689999987654

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=86.82  E-value=0.34  Score=37.69  Aligned_cols=34  Identities=24%  Similarity=0.291  Sum_probs=30.5

Q ss_pred             Cc--EEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 019878            1 MK--ILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (334)
Q Consensus         1 m~--ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~   35 (334)
                      |+  |+|.| +|..|...+..|.++|++|.++.+.+.
T Consensus         1 M~yDViIIG-aG~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           1 MHYDVIVIG-GGPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             CCCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CcCCEEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            55  89999 899999999999999999999988754

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=86.72  E-value=0.3  Score=38.12  Aligned_cols=33  Identities=21%  Similarity=0.324  Sum_probs=29.4

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCC-eEEEEEcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGH-SVRALVRRTS   35 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~-~V~~~~r~~~   35 (334)
                      +|+|.| +|.-|...+..|.++|+ +|+++.+++.
T Consensus         2 ~V~IIG-aG~aGL~aA~~L~~~G~~~V~vlE~~~~   35 (347)
T d1b5qa1           2 RVIVVG-AGMSGISAAKRLSEAGITDLLILEATDH   35 (347)
T ss_dssp             CEEEEC-CBHHHHHHHHHHHHTTCCCEEEECSSSS
T ss_pred             CEEEEC-CcHHHHHHHHHHHhCCCCcEEEEECCCC
Confidence            689999 89999999999999995 7999988754

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=86.71  E-value=0.51  Score=32.03  Aligned_cols=35  Identities=20%  Similarity=0.307  Sum_probs=28.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHh---CCCeEEEEEcCCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLK---QGHSVRALVRRTSDI   37 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~---~g~~V~~~~r~~~~~   37 (334)
                      +++|.| .|++|-.++..|.+   .|.+|+++.|++.-.
T Consensus        20 ~v~IiG-gG~ig~E~A~~l~~~~~~g~~Vtli~~~~~il   57 (117)
T d1feca2          20 RALCVG-GGYISIEFAGIFNAYKARGGQVDLAYRGDMIL   57 (117)
T ss_dssp             EEEEEC-SSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS
T ss_pred             eEEEEC-CChHHHHHHHHhHhhcccccccceeccccccc
Confidence            588888 89999999987664   488999999987543

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=85.76  E-value=1.4  Score=33.39  Aligned_cols=94  Identities=17%  Similarity=0.176  Sum_probs=59.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCC---CeEEEEEcCCCCCCCCCCCCCeEEEEcCC-------------------CChhh
Q 019878            1 MKILVSGASGYLGGRLCHALLKQG---HSVRALVRRTSDISGLPSEGALELVYGDV-------------------TDYRS   58 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl-------------------~d~~~   58 (334)
                      +||.|.| -|.-|.+++..|.+.|   .+.++++.+.......+.  ..+...+.-                   .+.+.
T Consensus        16 ~ki~ViG-vGGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~~~~--~~ki~ig~~~t~g~Gag~~p~~g~~aa~e~~~~   92 (209)
T d2vapa1          16 AKITVVG-CGGAGNNTITRLKMEGIEGAKTVAINTDAQQLIRTKA--DKKILIGKKLTRGLGAGGNPKIGEEAAKESAEE   92 (209)
T ss_dssp             CCEEEEE-EHHHHHHHHHHHHHHTCTTEEEEEEESBHHHHHTSCC--SEEEECCTTTTTTBCCTTCHHHHHHHHHHTHHH
T ss_pred             CcEEEEE-eCChHHHHHHHHHHcCCCceEEEEEeCCHHHHhcCCc--chhcccccccccccccccchHHHHHHHHHHHHH
Confidence            4789999 7889999999999876   344555554332222221  122222211                   12356


Q ss_pred             HHHHhcCCCEEEEeccccCCCCCCcccchhhhhHHHHHHHHHHHhcCCCc
Q 019878           59 LVDACFGCHVIFHTAALVEPWLPDPSRFFAVNVEGLKNVVQAAKETKTVE  108 (334)
Q Consensus        59 ~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  108 (334)
                      +.+.++++|.|+-+||....          +-..++-.+.+.+++. +..
T Consensus        93 I~~~l~~~d~vfi~AGlGGG----------TGsgaapvia~~ake~-g~l  131 (209)
T d2vapa1          93 IKAAIQDSDMVFITCGLGGG----------TGTGSAPVVAEISKKI-GAL  131 (209)
T ss_dssp             HHHHHTTCSEEEEEEETTSS----------HHHHHHHHHHHHHHHT-TCE
T ss_pred             HHHhccCCCEEEEEEeCCCC----------ccccHHHHHHHHHHHc-CCc
Confidence            77888899999999998543          3344556788888886 443

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=84.76  E-value=0.52  Score=36.45  Aligned_cols=66  Identities=17%  Similarity=0.241  Sum_probs=42.6

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCCCCCCCCCCeEEEEcCCCChhhHHHHh-cCCCEEEEeccc
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDISGLPSEGALELVYGDVTDYRSLVDAC-FGCHVIFHTAAL   75 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~-~~~d~vih~a~~   75 (334)
                      +||+|-| .|-+|+++++.|.+.|.+|++.+.+......+....+.+.     .+.+   +++ .++|+++=||--
T Consensus        40 ~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~-----~~~~---~~~~~~cDIl~PcA~~  106 (230)
T d1leha1          40 LAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADA-----VAPN---AIYGVTCDIFAPCALG  106 (230)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEE-----CCGG---GTTTCCCSEEEECSCS
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCcc-----cCCc---ccccccccEecccccc
Confidence            3688888 9999999999999999999988765432211110011121     1222   222 359999999863

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=84.13  E-value=0.56  Score=38.19  Aligned_cols=33  Identities=30%  Similarity=0.468  Sum_probs=22.7

Q ss_pred             CcEEEEcC-CC-hh--hHHHHHHHHhCCCeEEEEEcC
Q 019878            1 MKILVSGA-SG-YL--GGRLCHALLKQGHSVRALVRR   33 (334)
Q Consensus         1 m~ilItG~-tG-~i--G~~l~~~L~~~g~~V~~~~r~   33 (334)
                      .||||++| || -+  ..+|+++|.++||+|..++..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            47888864 32 11  224888998999999988754

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.11  E-value=0.5  Score=38.52  Aligned_cols=32  Identities=28%  Similarity=0.368  Sum_probs=29.0

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 019878            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (334)
Q Consensus         3 ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~   35 (334)
                      |+|.| +|.-|-..+..|+++|++|+++.++..
T Consensus         2 ViVIG-aG~aGL~aA~~L~~~G~~V~VlE~~~~   33 (383)
T d2v5za1           2 VVVVG-GGISGMAAAKLLHDSGLNVVVLEARDR   33 (383)
T ss_dssp             EEEEC-CBHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred             EEEEC-CCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence            67888 899999999999999999999987653

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=83.57  E-value=0.52  Score=39.04  Aligned_cols=31  Identities=23%  Similarity=0.190  Sum_probs=28.4

Q ss_pred             EEEEcCCChhhHHHHHHHHhCCCeEEEEEcCC
Q 019878            3 ILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (334)
Q Consensus         3 ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~   34 (334)
                      |+|.| +|+-|..++.+|.+.|++|.++-+..
T Consensus         5 VIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG~   35 (367)
T d1n4wa1           5 AVVIG-TGYGAAVSALRLGEAGVQTLMLEMGQ   35 (367)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred             EEEeC-cCHHHHHHHHHHHHCcCeEEEEecCC
Confidence            67888 99999999999999999999998853

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=83.56  E-value=2.1  Score=32.91  Aligned_cols=32  Identities=22%  Similarity=0.267  Sum_probs=26.9

Q ss_pred             CcEEEEcCCChhhHHHHHHHHh-CCCeEEEEEcC
Q 019878            1 MKILVSGASGYLGGRLCHALLK-QGHSVRALVRR   33 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~-~g~~V~~~~r~   33 (334)
                      +||+|-| .|-+|+++++.|.+ .|.+|++++-+
T Consensus        32 ~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd~   64 (234)
T d1b26a1          32 ATVAVQG-FGNVGQFAALLISQELGSKVVAVSDS   64 (234)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEET
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHhcCCceEEeecC
Confidence            3688887 99999999999974 69999988754

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=83.54  E-value=0.55  Score=37.93  Aligned_cols=33  Identities=27%  Similarity=0.371  Sum_probs=30.0

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~   35 (334)
                      .|+|.| +|+-|-..+..|.+.|.+|.++.+.+.
T Consensus         9 dV~IIG-AG~sGl~~a~~L~~~G~~v~i~Ek~~~   41 (298)
T d1w4xa1           9 DVLVVG-AGFSGLYALYRLRELGRSVHVIETAGD   41 (298)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CEEEEC-ccHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence            488999 899999999999999999999998764

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.44  E-value=0.51  Score=38.25  Aligned_cols=33  Identities=30%  Similarity=0.381  Sum_probs=29.7

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~   35 (334)
                      ||+|.| +|.-|-..+..|.++|++|.++-.+..
T Consensus         7 kViVIG-aG~aGL~aA~~L~~~G~~V~VlEa~~r   39 (449)
T d2dw4a2           7 KVIIIG-SGVSGLAAARQLQSFGMDVTLLEARDR   39 (449)
T ss_dssp             EEEEEC-CBHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cEEEEC-CCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            699999 899999999999999999999976543

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.04  E-value=0.75  Score=32.20  Aligned_cols=35  Identities=31%  Similarity=0.540  Sum_probs=28.5

Q ss_pred             cEEEEcCCChhhHHHHHHHHh----CCCeEEEEEcCCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLK----QGHSVRALVRRTSDI   37 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~----~g~~V~~~~r~~~~~   37 (334)
                      +++|.| +||+|-.++..|.+    .|.+|+.+.+.+...
T Consensus        39 ~i~IvG-gG~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~~l   77 (137)
T d1m6ia2          39 SITIIG-GGFLGSELACALGRKARALGTEVIQLFPEKGNM   77 (137)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTT
T ss_pred             EEEEEC-CCHHHHHHHHHHHHHHHhcCCEEEEecccccCC
Confidence            588887 79999999998863    588999998877643

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=82.83  E-value=0.54  Score=34.67  Aligned_cols=34  Identities=18%  Similarity=0.267  Sum_probs=28.8

Q ss_pred             cEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCCCCC
Q 019878            2 KILVSGASGYLGGRLCHALLKQGHSVRALVRRTSDI   37 (334)
Q Consensus         2 ~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~~~   37 (334)
                      +|||.| +|..+++++..|.+.| +|+++.|+.++.
T Consensus        20 ~vlIlG-aGG~arai~~aL~~~~-~i~I~nR~~~ka   53 (177)
T d1nvta1          20 NIVIYG-AGGAARAVAFELAKDN-NIIIANRTVEKA   53 (177)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTSSS-EEEEECSSHHHH
T ss_pred             EEEEEC-CcHHHHHHHHHHcccc-ceeeehhhhhHH
Confidence            699999 6778999999998776 899999987654

>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-vancosaminyltransferase GftD
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=81.93  E-value=0.49  Score=39.25  Aligned_cols=32  Identities=25%  Similarity=0.319  Sum_probs=23.7

Q ss_pred             CcEEEE-cCCC-h--hhHHHHHHHHhCCCeEEEEEc
Q 019878            1 MKILVS-GASG-Y--LGGRLCHALLKQGHSVRALVR   32 (334)
Q Consensus         1 m~ilIt-G~tG-~--iG~~l~~~L~~~g~~V~~~~r   32 (334)
                      ||||++ +||+ -  ---.|++.|.++||+|+.++-
T Consensus         1 mrIl~~~~gt~Ghv~P~l~lA~~L~~rGh~V~~~t~   36 (401)
T d1rrva_           1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAP   36 (401)
T ss_dssp             CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CeEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEEC
Confidence            998888 4442 1  223678999999999999874

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=81.58  E-value=0.64  Score=36.55  Aligned_cols=33  Identities=15%  Similarity=0.178  Sum_probs=29.1

Q ss_pred             CcEEEEcCCChhhHHHHHHHHhCCCeEEEEEcCC
Q 019878            1 MKILVSGASGYLGGRLCHALLKQGHSVRALVRRT   34 (334)
Q Consensus         1 m~ilItG~tG~iG~~l~~~L~~~g~~V~~~~r~~   34 (334)
                      .||+|-| .|-+|+++++.|.+.|.+|++++-+.
T Consensus        37 ~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD~~   69 (255)
T d1bgva1          37 KTVALAG-FGNVAWGAAKKLAELGAKAVTLSGPD   69 (255)
T ss_dssp             CEEEECC-SSHHHHHHHHHHHHHTCEEEEEEETT
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCeEEEEecCC
Confidence            3688888 89999999999999999999887653

>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: UDP-glucosyltransferase GtfB
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=81.52  E-value=0.79  Score=37.78  Aligned_cols=32  Identities=22%  Similarity=0.170  Sum_probs=24.9

Q ss_pred             CcEEEEcC-CC---hhhHHHHHHHHhCCCeEEEEEc
Q 019878            1 MKILVSGA-SG---YLGGRLCHALLKQGHSVRALVR   32 (334)
Q Consensus         1 m~ilItG~-tG---~iG~~l~~~L~~~g~~V~~~~r   32 (334)
                      |||||++. |+   +=.-+|++.|.++||+|+.++-
T Consensus         1 mkil~~~~gt~Gh~~P~lala~~L~~~Gh~V~~~~~   36 (401)
T d1iira_           1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAP   36 (401)
T ss_dssp             CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEeC
Confidence            99999853 21   2455699999999999999874

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=81.10  E-value=0.62  Score=38.46  Aligned_cols=32  Identities=22%  Similarity=0.203  Sum_probs=24.0

Q ss_pred             CcEEEE-cCCC-h--hhHHHHHHHHhCCCeEEEEEc
Q 019878            1 MKILVS-GASG-Y--LGGRLCHALLKQGHSVRALVR   32 (334)
Q Consensus         1 m~ilIt-G~tG-~--iG~~l~~~L~~~g~~V~~~~r   32 (334)
                      |||||+ |||+ -  =--.|++.|.++||+|+.++.
T Consensus         1 mril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~   36 (391)
T d1pn3a_           1 MRVLITGCGSRGDTEPLVALAARLRELGADARMCLP   36 (391)
T ss_dssp             CEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEC
Confidence            999885 4443 2  233589999999999999874

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=80.32  E-value=0.83  Score=39.32  Aligned_cols=31  Identities=35%  Similarity=0.498  Sum_probs=25.0

Q ss_pred             CcEEEEcC-------CChhh---HHHHHHHHhCCCeEEEEE
Q 019878            1 MKILVSGA-------SGYLG---GRLCHALLKQGHSVRALV   31 (334)
Q Consensus         1 m~ilItG~-------tG~iG---~~l~~~L~~~g~~V~~~~   31 (334)
                      ||||....       +|.+|   .+|++.|.++||+|.++.
T Consensus         1 M~i~~v~~e~~P~~~~GGl~~vv~~La~~L~~~Gh~V~Vi~   41 (477)
T d1rzua_           1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLI   41 (477)
T ss_dssp             CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CEEEEEEEeeecccccCcHHHHHHHHHHHHHHcCCeEEEEe
Confidence            89888754       46666   567999999999999985

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=80.17  E-value=1.1  Score=31.80  Aligned_cols=31  Identities=19%  Similarity=0.099  Sum_probs=20.8

Q ss_pred             EEEcCCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 019878            4 LVSGASGYLGGRLCHALLKQGHSVRALVRRTS   35 (334)
Q Consensus         4 lItG~tG~iG~~l~~~L~~~g~~V~~~~r~~~   35 (334)
                      -+.| +|.+|+++++.|.+.++.+.+.+|+++
T Consensus         3 gfIG-~G~mg~~l~~~L~~~~~~~~v~~R~~~   33 (153)
T d2i76a2           3 NFVG-TGTLTRFFLECLKDRYEIGYILSRSID   33 (153)
T ss_dssp             EEES-CCHHHHHHHHTTC----CCCEECSSHH
T ss_pred             EEEe-CcHHHHHHHHHHHhCCCEEEEEeCChh
Confidence            3556 999999999988765444457788654