Query 019880
Match_columns 334
No_of_seqs 271 out of 1301
Neff 8.5
Searched_HMMs 13730
Date Mon Mar 25 08:29:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019880.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/019880hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1olma3 c.13.1.1 (A:76-274) Su 100.0 1E-39 7.4E-44 281.7 14.3 184 84-276 5-197 (199)
2 d1auaa2 c.13.1.1 (A:97-299) C- 100.0 1.9E-35 1.4E-39 255.6 14.2 171 84-260 7-182 (203)
3 d1r5la2 c.13.1.1 (A:91-275) Al 100.0 5.5E-32 4E-36 230.3 11.7 156 81-249 3-160 (185)
4 d1olma1 a.5.3.1 (A:1-75) Super 99.6 5.7E-15 4.2E-19 105.2 8.2 62 3-72 12-73 (75)
5 d1auaa1 a.5.3.1 (A:4-96) N-ter 99.4 7.9E-14 5.8E-18 102.9 7.2 61 3-72 30-90 (93)
6 d1r5la1 a.5.3.1 (A:25-90) Alph 99.3 3.8E-13 2.8E-17 92.6 4.7 57 4-66 1-57 (66)
7 d2di0a1 a.5.2.4 (A:8-70) Activ 81.0 1.2 9E-05 28.2 4.5 28 30-57 18-45 (63)
8 d1xb2b1 a.5.2.2 (B:56-111) Elo 78.3 2.2 0.00016 26.4 5.0 41 2-58 3-43 (56)
9 d1efub3 a.5.2.2 (B:1-54) Elong 75.3 3.3 0.00024 25.3 5.2 40 2-57 3-42 (54)
10 d1vg5a_ a.5.2.1 (A:) Rhomboid 73.1 2.1 0.00015 28.1 4.1 28 30-57 39-66 (73)
11 d1wgla_ a.5.2.4 (A:) Toll-inte 72.9 3.1 0.00023 26.0 4.7 30 28-57 19-48 (59)
12 d2daha1 a.5.2.1 (A:8-48) Ubiqu 71.7 2.4 0.00017 24.4 3.6 26 32-57 15-40 (41)
13 d1v92a_ a.5.2.3 (A:) NSFL1 (p9 68.9 3.3 0.00024 24.4 4.0 24 32-55 18-41 (46)
14 d2dnaa1 a.5.2.1 (A:12-61) Ubiq 67.3 3.5 0.00025 24.8 3.8 26 32-57 21-46 (50)
15 d2bwba1 a.5.2.1 (A:328-371) DS 64.6 3.1 0.00023 24.3 3.1 25 32-56 18-42 (44)
16 d1aipc1 a.5.2.2 (C:2-53) Elong 63.2 8 0.00058 23.3 5.0 22 36-57 19-40 (52)
17 d1ufza_ a.5.9.1 (A:) HBS1-like 58.2 12 0.00087 24.7 5.5 29 29-57 46-74 (83)
18 d1mn3a_ a.5.2.4 (A:) Vacuolar 56.8 17 0.0013 21.9 5.8 33 25-57 19-51 (54)
19 d2k0bx1 a.5.2.1 (X:1-52) Seque 50.2 3.5 0.00025 24.8 1.6 22 35-56 27-48 (52)
20 d1veja1 a.5.2.1 (A:8-68) 49314 47.7 9.4 0.00069 23.8 3.5 24 33-56 36-59 (61)
21 d1oqya1 a.5.2.1 (A:160-200) DN 44.5 4.7 0.00034 23.1 1.5 26 30-55 14-39 (41)
22 d1wgna_ a.5.2.1 (A:) Ubiquitin 44.2 9.1 0.00066 24.0 3.1 28 31-58 30-57 (63)
23 d1vdla_ a.5.2.1 (A:) Ubiquitin 36.5 25 0.0018 22.6 4.2 25 33-57 39-63 (80)
24 d1oaia_ a.5.2.3 (A:) FG-bindin 35.1 31 0.0023 21.0 4.5 27 31-57 19-45 (59)
25 d1ijwc_ a.4.1.2 (C:) HIN recom 34.4 32 0.0023 19.9 4.3 39 2-45 6-46 (47)
26 d1wjia_ a.5.2.1 (A:) Tudor dom 32.0 30 0.0022 21.3 4.1 29 30-58 19-47 (63)
27 d2g3qa1 a.5.2.1 (A:1339-1381) 26.9 33 0.0024 19.4 3.2 27 30-56 14-40 (43)
28 d1wiva_ a.5.2.1 (A:) Ubiquitin 25.7 31 0.0023 22.0 3.4 27 31-57 40-66 (73)
29 d1umqa_ a.4.1.12 (A:) Photosyn 25.5 29 0.0021 21.1 3.1 22 34-55 22-43 (60)
30 d2q3la1 c.13.2.2 (A:1-125) Unc 24.2 22 0.0016 25.2 2.7 50 154-211 60-110 (125)
31 d3e46a1 a.5.2.1 (A:157-198) Ub 23.8 54 0.004 17.7 3.6 26 30-55 16-41 (42)
32 d2oo3a1 c.66.1.59 (A:9-279) Un 22.7 14 0.001 30.3 1.4 25 186-210 229-253 (271)
No 1
>d1olma3 c.13.1.1 (A:76-274) Supernatant protein factor (SPF), middle domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1e-39 Score=281.74 Aligned_cols=184 Identities=24% Similarity=0.396 Sum_probs=164.0
Q ss_pred HHhcccccccccCCCCCeEEEEeeCCcCcc----cchHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcceEEEEEeCCCC
Q 019880 84 VRDSQLVGVSGYSKEGLPVIAVGVGLSTHD----KASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGL 159 (334)
Q Consensus 84 l~~~~~~~~~g~Dk~G~pV~~~~~g~~~~~----~~~~~~~l~~~i~~~E~~~~~~l~~~~~~~~~~~~~~v~IiDl~g~ 159 (334)
++++.+.++||+|++||||+++++|+++++ ..+.+++++++++.+|...+.. ..++.+.+++++++++|+||+|+
T Consensus 5 i~~~~p~~~~G~Dk~Grpv~~~r~g~~d~~~l~~~~~~~~~~~~~~~~~E~~~~~~-~~~~~~~~~~v~~~~~I~Dl~g~ 83 (199)
T d1olma3 5 IQQYLSGGMCGYDLDGCPVWYDIIGPLDAKGLLFSASKQDLLRTKMRECELLLQEC-AHQTTKLGRKVETITIIYDCEGL 83 (199)
T ss_dssp HHHHCCBEEEEECTTSCEEEEEECTTCCHHHHHTTSCHHHHHHHHHHHHHHHHHHH-HHHHHHHTSCCCCEEEEEECTTC
T ss_pred HHHHCCCccccCCCCCCEEEEEecccCChHHhhccCCHHHHHHHHHHHHHHHHHHH-HHHHHhcCCccceEEEEEECCCC
Confidence 577889999999999999999999998865 3567889999999999887654 44556778899999999999999
Q ss_pred cccccch--hHHHHHHHHhhhccCcccccceEEEcCChhhHHHHHHHcccCChhhhcceEEeCCCChhHHHhhCCCCCCC
Q 019880 160 KLSALNQ--IKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLP 237 (334)
Q Consensus 160 ~l~~~~~--~~~~~~i~~i~~~~YPerl~~i~ivN~P~~f~~~~~~vkpfL~~~t~~KI~i~~~~~~~~L~~~I~~~~LP 237 (334)
++++++. +++++.++.++|++|||+++++||||+|++|+++|+++||||+++|++||+|+++++.++|.++|++++||
T Consensus 84 s~~~~~~~~~~~l~~~~~~~q~~YPerl~~i~iiN~P~~f~~~w~ivk~fl~~~t~~KI~~~~~~~~~~L~~~i~~~~lP 163 (199)
T d1olma3 84 GLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGANWKEVLLKHISPDQVP 163 (199)
T ss_dssp CGGGGCHHHHHHHHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHHHHGGGSCHHHHHTEEECCTTHHHHHTTTSCGGGSB
T ss_pred chhhhccccHHHHHHHHHHHHHHHHHhhhheEEECCCHHHHHHHHHHHHhcCHHhhccEEEeCCCCHHHHHHhCCHhhCC
Confidence 9999975 57889999999999999999999999999999999999999999999999999877788999999999999
Q ss_pred cccccCCCCcccccCCCCCCCccc---CCccchHHHHHHHHh
Q 019880 238 HFCRKEGSGSSRHIGNGTTENCFS---LDHAFHQRLYNYIKQ 276 (334)
Q Consensus 238 ~~~~~e~GG~~~~~~~~~~~~c~~---~~~p~~~~~y~~i~~ 276 (334)
++| ||++++ +++++.|.. .++++|+++| +++
T Consensus 164 ~~y----GGt~~~--~~~~~~~~~~~~~~~~~p~~~~--~~~ 197 (199)
T d1olma3 164 VEY----GGTMTD--PDGNPKCKSKINYGGDIPRKYY--VRD 197 (199)
T ss_dssp GGG----TSSBCC--TTCCTTCTTTCBCCCCCCGGGC--SCS
T ss_pred HHh----CCCCCC--CCCChhhhccCCCCCcCCHHHh--hcc
Confidence 988 999988 688888864 4889999988 544
No 2
>d1auaa2 c.13.1.1 (A:97-299) C-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=1.9e-35 Score=255.57 Aligned_cols=171 Identities=24% Similarity=0.357 Sum_probs=152.1
Q ss_pred HHhcccccccccCCCCCeEEEEeeCCcCcc----cchHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcceEEEEEeCCCC
Q 019880 84 VRDSQLVGVSGYSKEGLPVIAVGVGLSTHD----KASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGL 159 (334)
Q Consensus 84 l~~~~~~~~~g~Dk~G~pV~~~~~g~~~~~----~~~~~~~l~~~i~~~E~~~~~~l~~~~~~~~~~~~~~v~IiDl~g~ 159 (334)
+.++.+.++||+|++||||+|+++|.+++. ..+.+++++++++.+|+..+..+.......+..++++++|+||+|+
T Consensus 7 ~~~~~p~~~~G~Dk~GrpV~~~r~g~~~~~~l~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~v~~~i~IiD~~g~ 86 (203)
T d1auaa2 7 IAKFYPQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHLVETSCTIMDLKGI 86 (203)
T ss_dssp HGGGSCCEEEEECTTSCEEEEECGGGCCHHHHTTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTSCCCCEEEEEECTTC
T ss_pred HHHHCCCcCCCCCCCCCEEEEEECCCCChHHhcccCCHHHHHHHHHHHHHHHHHHHHHHhhhhccCccceEEEEEECCCC
Confidence 467889999999999999999999998764 3477889999999999988877666667778889999999999999
Q ss_pred cccccch-hHHHHHHHHhhhccCcccccceEEEcCChhhHHHHHHHcccCChhhhcceEEeCCCChhHHHhhCCCCCCCc
Q 019880 160 KLSALNQ-IKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLPH 238 (334)
Q Consensus 160 ~l~~~~~-~~~~~~i~~i~~~~YPerl~~i~ivN~P~~f~~~~~~vkpfL~~~t~~KI~i~~~~~~~~L~~~I~~~~LP~ 238 (334)
++++++. +.+++.++++++++||++++++||||+|++|+++|+++||||+++|++||+++++++.+.|.++||+++||+
T Consensus 87 s~~~~~~~~~~~k~~~~~~q~~yPe~l~~i~ivN~P~~~~~~~~~vk~fl~~~t~~KI~~~~~~~~~~L~~~id~~~LP~ 166 (203)
T d1auaa2 87 SISSAYSVMSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLPV 166 (203)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEESCCHHHHHHHHHHGGGSCHHHHTTEEECCSCCHHHHTTTSCSSSSBG
T ss_pred ChHHhhhHHHHHHHHHHHHHHhChHhhcceEEECCcHHHHHHHHHHHhhcCHHHhhceeecCCCCHHHHHhhCCHhhChH
Confidence 9999865 467889999999999999999999999999999999999999999999999998888999999999999999
Q ss_pred ccccCCCCcccccCCCCCCCcc
Q 019880 239 FCRKEGSGSSRHIGNGTTENCF 260 (334)
Q Consensus 239 ~~~~e~GG~~~~~~~~~~~~c~ 260 (334)
+| ||++++. +..+.|.
T Consensus 167 ~~----GG~~~~~--~~~g~~~ 182 (203)
T d1auaa2 167 KF----GGKSEVD--ESKGGLY 182 (203)
T ss_dssp GG----TSCBCCC--GGGCCST
T ss_pred Hh----CCCCcCC--CCCCCcc
Confidence 88 9999873 3344454
No 3
>d1r5la2 c.13.1.1 (A:91-275) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97 E-value=5.5e-32 Score=230.28 Aligned_cols=156 Identities=15% Similarity=0.165 Sum_probs=135.3
Q ss_pred HHHHHhcccccccccCCCCCeEEEEeeCCcCcccchHHHHHHHHHHHHHHHHHhcchhhhhhcCCCcceEEEEEeCCCCc
Q 019880 81 YRAVRDSQLVGVSGYSKEGLPVIAVGVGLSTHDKASVNYYVQSHIQMNEYRDRVVLPSASKKHGRYIGTSLKVLDMTGLK 160 (334)
Q Consensus 81 ~~~l~~~~~~~~~g~Dk~G~pV~~~~~g~~~~~~~~~~~~l~~~i~~~E~~~~~~l~~~~~~~~~~~~~~v~IiDl~g~~ 160 (334)
.+.++.+.+..+||+|++||||+++++|+++++..+.+++++.+++..|...+ + ...+++|+++|+||+|++
T Consensus 3 ~~~l~~g~~~~lp~rD~~Gr~v~~~r~~~~d~~~~~~~~~~r~~~~~~e~~~~---~-----~~~~~~g~~~I~D~~g~s 74 (185)
T d1r5la2 3 IGLLKAGYHGVLRSRDPTGSKVLIYRIAHWDPKVFTAYDVFRVSLITSELIVQ---E-----VETQRNGIKAIFDLEGWQ 74 (185)
T ss_dssp HHHHHTTCEEECSSCCTTCCEEEEEEGGGCCTTTSCHHHHHHHHHHHHHHHTT---S-----HHHHHHCEEEEEECTTCC
T ss_pred HHHHHcCCceecCCCCcCcCEEEEEEcccCCCCCCCHHHHHHHHHHHHHHHHh---c-----cccCCceEEEEEECCCCC
Confidence 45678888888999999999999999999999888889999998888885421 1 122467899999999999
Q ss_pred ccccch--hHHHHHHHHhhhccCcccccceEEEcCChhhHHHHHHHcccCChhhhcceEEeCCCChhHHHhhCCCCCCCc
Q 019880 161 LSALNQ--IKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQERTRRKMQVLQGNGRDELLKIMDYASLPH 238 (334)
Q Consensus 161 l~~~~~--~~~~~~i~~i~~~~YPerl~~i~ivN~P~~f~~~~~~vkpfL~~~t~~KI~i~~~~~~~~L~~~I~~~~LP~ 238 (334)
++++++ +++++.+++++|++||+|++++|+||+|++|+++|+++||||+++|++||++++++ .+++..++++++||.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~q~~yP~rl~~i~ivn~P~~~~~~~~~vk~fl~~k~~~Ki~~~~~~-~~~~~~~~~~~~LP~ 153 (185)
T d1r5la2 75 FSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNN-YKQSLLQHFPDILPL 153 (185)
T ss_dssp HHHHHHCCHHHHHHHHHHHHTSSSSCEEEEEEESCCGGGHHHHHHHGGGSCHHHHTTEEECCSS-CHHHHHHHSTTTSCG
T ss_pred HHHhhhccHHHHHHHHHHHHhhCchhhheeEEEcCCHHHHHHHHHHHHhccHHHHhheEEeccc-hHHHHhhcCHHhCCH
Confidence 999754 67899999999999999999999999999999999999999999999999998754 556777788999999
Q ss_pred ccccCCCCccc
Q 019880 239 FCRKEGSGSSR 249 (334)
Q Consensus 239 ~~~~e~GG~~~ 249 (334)
+| ||++.
T Consensus 154 ~~----GG~~~ 160 (185)
T d1r5la2 154 EY----GGEEF 160 (185)
T ss_dssp GG----TCSSC
T ss_pred hc----CCCCC
Confidence 88 88763
No 4
>d1olma1 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=5.7e-15 Score=105.22 Aligned_cols=62 Identities=27% Similarity=0.514 Sum_probs=53.4
Q ss_pred hHHHHHHHHHHHhhccHHHHHHhhhhcCCCChHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHcCcchhhc
Q 019880 3 HQEEIKQFQTLMEDLDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKMLVDCLRWRIENDIDNILA 72 (334)
Q Consensus 3 ~~~~i~~lr~~l~~~~~~l~~~~~~~~~~~~d~~LlRFLra~~~dv~kA~~~l~~~l~wR~~~~id~i~~ 72 (334)
.++++++||+++.+.... ....||.+|+||||||+||+++|.+||++|++||+++++|+|+.
T Consensus 12 q~~~l~elr~~l~~~~~~--------~~~~dd~~LlRFLrAr~fdv~kA~~ml~~~l~WR~~~~vD~Il~ 73 (75)
T d1olma1 12 QKEALAKFRENVQDVLPA--------LPNPDDYFLLRWLRARSFDLQKSEAMLRKHVEFRKQKDIDNIIS 73 (75)
T ss_dssp HHHHHHHHHHHHGGGGGG--------SSCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTGGGGGG
T ss_pred HHHHHHHHHHHHHhhccc--------CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHcCchhhhc
Confidence 367899999998875432 24578999999999999999999999999999999999999874
No 5
>d1auaa1 a.5.3.1 (A:4-96) N-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.44 E-value=7.9e-14 Score=102.93 Aligned_cols=61 Identities=31% Similarity=0.607 Sum_probs=53.5
Q ss_pred hHHHHHHHHHHHhhccHHHHHHhhhhcCCCChHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHcCcchhhc
Q 019880 3 HQEEIKQFQTLMEDLDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKMLVDCLRWRIENDIDNILA 72 (334)
Q Consensus 3 ~~~~i~~lr~~l~~~~~~l~~~~~~~~~~~~d~~LlRFLra~~~dv~kA~~~l~~~l~wR~~~~id~i~~ 72 (334)
.++++++||+++.+.+. ...++|.+|+||||||+||+++|.+||+++++||+++++|+|+.
T Consensus 30 q~~~L~elr~~l~~~~~---------~~~~DD~~llRfLrAr~fd~~~a~~ml~~~l~wR~~~~~d~i~~ 90 (93)
T d1auaa1 30 QEKALAELRKLLEDAGF---------IERLDDSTLLRFLRARKFDVQLAKEMFENCEKWRKDYGTDTILQ 90 (93)
T ss_dssp HHHHHHHHHHHHHHTTC---------CSSCSHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTGGGHHH
T ss_pred HHHHHHHHHHHHHHCCC---------CCCCCHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhCcchhhh
Confidence 36789999999887642 34678999999999999999999999999999999999998864
No 6
>d1r5la1 a.5.3.1 (A:25-90) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.34 E-value=3.8e-13 Score=92.65 Aligned_cols=57 Identities=23% Similarity=0.391 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHhhccHHHHHHhhhhcCCCChHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHcC
Q 019880 4 QEEIKQFQTLMEDLDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKMLVDCLRWRIEND 66 (334)
Q Consensus 4 ~~~i~~lr~~l~~~~~~l~~~~~~~~~~~~d~~LlRFLra~~~dv~kA~~~l~~~l~wR~~~~ 66 (334)
+++|+|||+++.+...+ .++...+|.+|+||||||+||+++|.+||+++++||++++
T Consensus 1 q~aL~elR~~l~~~~~p------~lp~~~dD~~LlrFLRarkf~~~ka~~~l~~y~~~R~~~p 57 (66)
T d1r5la1 1 QPGLAALRRRAREAGVP------LAPLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRAECP 57 (66)
T ss_dssp CTTHHHHHHHHHHHTCC------CSSSCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHCH
T ss_pred CHHHHHHHHHHHHcCCC------cCCCCCCHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHCH
Confidence 46899999999776321 1245678999999999999999999999999999999984
No 7
>d2di0a1 a.5.2.4 (A:8-70) Activating signal cointegrator 1 complex subunit 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=81.00 E-value=1.2 Score=28.24 Aligned_cols=28 Identities=4% Similarity=0.096 Sum_probs=24.9
Q ss_pred CCCChHHHHHHHhhcCCCHHHHHHHHHH
Q 019880 30 QGNPTDTLVRFLKARDWNVSKAHKMLVD 57 (334)
Q Consensus 30 ~~~~d~~LlRFLra~~~dv~kA~~~l~~ 57 (334)
.++.+.|+.+.|..++.|++++..+|-+
T Consensus 18 PdLG~GFi~~~L~~Y~~n~E~vI~~lLe 45 (63)
T d2di0a1 18 PDLGEGFILACLEYYHYDPEQVINNILE 45 (63)
T ss_dssp CSSCHHHHHHHHHHTTTCHHHHHHHHHT
T ss_pred CCCcHHHHHHHHHHhCCCHHHHHHHHHc
Confidence 4678899999999999999999998855
No 8
>d1xb2b1 a.5.2.2 (B:56-111) Elongation factor Ts (EF-Ts), N-terminal domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=78.31 E-value=2.2 Score=26.39 Aligned_cols=41 Identities=10% Similarity=0.003 Sum_probs=30.7
Q ss_pred chHHHHHHHHHHHhhccHHHHHHhhhhcCCCChHHHHHHHhhcCCCHHHHHHHHHHH
Q 019880 2 AHQEEIKQFQTLMEDLDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKMLVDC 58 (334)
Q Consensus 2 ~~~~~i~~lr~~l~~~~~~l~~~~~~~~~~~~d~~LlRFLra~~~dv~kA~~~l~~~ 58 (334)
++.+.|.+||+..... =..+-+-|..+++|+++|.+.|+.-
T Consensus 3 ~s~~lvk~LRe~Tga~----------------~~dcKkAL~e~~gD~ekA~e~Lrkk 43 (56)
T d1xb2b1 3 SSKELLMKLRRKTGYS----------------FINCKKALETCGGDLKQAESWLHKQ 43 (56)
T ss_dssp HHHHHHHHHHHHHCCC----------------HHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhCCC----------------HHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 4667788888765443 2356678889999999999999863
No 9
>d1efub3 a.5.2.2 (B:1-54) Elongation factor Ts (EF-Ts), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=75.32 E-value=3.3 Score=25.34 Aligned_cols=40 Identities=8% Similarity=-0.031 Sum_probs=30.0
Q ss_pred chHHHHHHHHHHHhhccHHHHHHhhhhcCCCChHHHHHHHhhcCCCHHHHHHHHHH
Q 019880 2 AHQEEIKQFQTLMEDLDDSLKETFKNVHQGNPTDTLVRFLKARDWNVSKAHKMLVD 57 (334)
Q Consensus 2 ~~~~~i~~lr~~l~~~~~~l~~~~~~~~~~~~d~~LlRFLra~~~dv~kA~~~l~~ 57 (334)
++.+.|++||+....-- ..+-+-|...++|+++|.+.|+.
T Consensus 3 is~~~iK~LR~~Tgag~----------------~dCKkAL~e~~gD~ekA~e~Lr~ 42 (54)
T d1efub3 3 ITASLVKELRERTGAGM----------------MDCKKALTEANGDIELAIENMRK 42 (54)
T ss_dssp CCHHHHHHHHHHHCCCH----------------HHHHHHHHHTTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCH----------------HHHHHHHHHcCCCHHHHHHHHHH
Confidence 56788888888765432 24556678899999999998875
No 10
>d1vg5a_ a.5.2.1 (A:) Rhomboid family protein At3g58460 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=73.12 E-value=2.1 Score=28.11 Aligned_cols=28 Identities=21% Similarity=0.194 Sum_probs=23.3
Q ss_pred CCCChHHHHHHHhhcCCCHHHHHHHHHH
Q 019880 30 QGNPTDTLVRFLKARDWNVSKAHKMLVD 57 (334)
Q Consensus 30 ~~~~d~~LlRFLra~~~dv~kA~~~l~~ 57 (334)
-+++.....+=|+++++|++.|...|-.
T Consensus 39 MGF~~~~a~~AL~~~~~n~e~A~~~Ll~ 66 (73)
T d1vg5a_ 39 MGFDRTQVEVALAAADDDLTVAVEILMS 66 (73)
T ss_dssp TTCCHHHHHHHHHHHTSCHHHHHHHHHT
T ss_pred hCCCHHHHHHHHHHhCCCHHHHHHHHHh
Confidence 3678888899999999999999988743
No 11
>d1wgla_ a.5.2.4 (A:) Toll-interacting protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=72.91 E-value=3.1 Score=25.98 Aligned_cols=30 Identities=17% Similarity=0.174 Sum_probs=25.8
Q ss_pred hcCCCChHHHHHHHhhcCCCHHHHHHHHHH
Q 019880 28 VHQGNPTDTLVRFLKARDWNVSKAHKMLVD 57 (334)
Q Consensus 28 ~~~~~~d~~LlRFLra~~~dv~kA~~~l~~ 57 (334)
+-.++|+..+..-|++++++++.|+..|..
T Consensus 19 MFP~~D~~vI~~VL~a~~G~vd~aid~LL~ 48 (59)
T d1wgla_ 19 MFPNMDQEVIRSVLEAQRGNKDAAINSLLQ 48 (59)
T ss_dssp HCSSSCHHHHHHHHTTTTTCHHHHHHHHHH
T ss_pred HCCCCCHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 345678889999999999999999998864
No 12
>d2daha1 a.5.2.1 (A:8-48) Ubiquilin-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=71.74 E-value=2.4 Score=24.43 Aligned_cols=26 Identities=19% Similarity=0.082 Sum_probs=22.7
Q ss_pred CChHHHHHHHhhcCCCHHHHHHHHHH
Q 019880 32 NPTDTLVRFLKARDWNVSKAHKMLVD 57 (334)
Q Consensus 32 ~~d~~LlRFLra~~~dv~kA~~~l~~ 57 (334)
.|+..-++-|++.++||++|++.|.+
T Consensus 15 ~d~~~Ni~AL~~t~Gdv~~Aie~Ll~ 40 (41)
T d2daha1 15 LNREANLQALIATGGDVDAAVEKLRQ 40 (41)
T ss_dssp CCHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 35678899999999999999999875
No 13
>d1v92a_ a.5.2.3 (A:) NSFL1 (p97 ATPase) cofactor p47, UBA-like domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=68.89 E-value=3.3 Score=24.36 Aligned_cols=24 Identities=21% Similarity=0.376 Sum_probs=19.7
Q ss_pred CChHHHHHHHhhcCCCHHHHHHHH
Q 019880 32 NPTDTLVRFLKARDWNVSKAHKML 55 (334)
Q Consensus 32 ~~d~~LlRFLra~~~dv~kA~~~l 55 (334)
.+...-..||.+++||++.|+...
T Consensus 18 ~~~~~A~~~Le~~~w~Le~Ai~~y 41 (46)
T d1v92a_ 18 AEEDRARFFLESAGWDLQIALASF 41 (46)
T ss_dssp CCHHHHHHHHHHTTSCSHHHHHHH
T ss_pred cCHHHHHHHHHHcCCcHHHHHHHH
Confidence 455566789999999999998875
No 14
>d2dnaa1 a.5.2.1 (A:12-61) Ubiquilin-like protein Ubqlnl {Mouse (Mus musculus) [TaxId: 10090]}
Probab=67.30 E-value=3.5 Score=24.79 Aligned_cols=26 Identities=19% Similarity=0.038 Sum_probs=23.0
Q ss_pred CChHHHHHHHhhcCCCHHHHHHHHHH
Q 019880 32 NPTDTLVRFLKARDWNVSKAHKMLVD 57 (334)
Q Consensus 32 ~~d~~LlRFLra~~~dv~kA~~~l~~ 57 (334)
.|++.-++-|.+.++||+.|++.|.+
T Consensus 21 ~d~~~Ni~AL~~t~GdV~~Aie~Ll~ 46 (50)
T d2dnaa1 21 VNYNANLQALIATDGDTNAAIYKLKS 46 (50)
T ss_dssp CCHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 36678899999999999999999875
No 15
>d2bwba1 a.5.2.1 (A:328-371) DSK2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=64.56 E-value=3.1 Score=24.29 Aligned_cols=25 Identities=24% Similarity=0.093 Sum_probs=21.9
Q ss_pred CChHHHHHHHhhcCCCHHHHHHHHH
Q 019880 32 NPTDTLVRFLKARDWNVSKAHKMLV 56 (334)
Q Consensus 32 ~~d~~LlRFLra~~~dv~kA~~~l~ 56 (334)
.|+..-++-|++.++||+.|++.|.
T Consensus 18 ~d~~~Ni~AL~~t~GdV~~Aie~Ll 42 (44)
T d2bwba1 18 FDFDRNVAALRRSGGSVQGALDSLL 42 (44)
T ss_dssp CCHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CcHHHHHHHHHHcCCCHHHHHHHHh
Confidence 3567889999999999999999874
No 16
>d1aipc1 a.5.2.2 (C:2-53) Elongation factor Ts (EF-Ts), N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=63.16 E-value=8 Score=23.31 Aligned_cols=22 Identities=27% Similarity=0.519 Sum_probs=18.5
Q ss_pred HHHHHHhhcCCCHHHHHHHHHH
Q 019880 36 TLVRFLKARDWNVSKAHKMLVD 57 (334)
Q Consensus 36 ~LlRFLra~~~dv~kA~~~l~~ 57 (334)
.+-+-|...++|+++|.+.|+.
T Consensus 19 dcKkAL~e~~gD~ekA~e~Lr~ 40 (52)
T d1aipc1 19 DVKRALEDAGWDEEKAVQLLRE 40 (52)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHH
Confidence 5567788999999999999875
No 17
>d1ufza_ a.5.9.1 (A:) HBS1-like protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=58.19 E-value=12 Score=24.73 Aligned_cols=29 Identities=21% Similarity=0.393 Sum_probs=25.2
Q ss_pred cCCCChHHHHHHHhhcCCCHHHHHHHHHH
Q 019880 29 HQGNPTDTLVRFLKARDWNVSKAHKMLVD 57 (334)
Q Consensus 29 ~~~~~d~~LlRFLra~~~dv~kA~~~l~~ 57 (334)
.+.+++..|.+-....+||+++|...+-+
T Consensus 46 GDsvpe~~lv~avlk~dydvekALd~vL~ 74 (83)
T d1ufza_ 46 GDAVPDDILTEAILKHKFDVQKALSVVLE 74 (83)
T ss_dssp TTTSCHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHccCCHHHHHHHHHh
Confidence 35578999999999999999999998765
No 18
>d1mn3a_ a.5.2.4 (A:) Vacuolar protein sorting-associated protein vps9 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=56.81 E-value=17 Score=21.91 Aligned_cols=33 Identities=9% Similarity=0.124 Sum_probs=27.7
Q ss_pred hhhhcCCCChHHHHHHHhhcCCCHHHHHHHHHH
Q 019880 25 FKNVHQGNPTDTLVRFLKARDWNVSKAHKMLVD 57 (334)
Q Consensus 25 ~~~~~~~~~d~~LlRFLra~~~dv~kA~~~l~~ 57 (334)
++.+-.++|...+---|+|++++++.|+..|..
T Consensus 19 Lk~MFP~~D~~VI~~VL~a~~G~vd~aidaLL~ 51 (54)
T d1mn3a_ 19 LQNMFPDMDPSLIEDVCIAKKSRIEPCVDALLS 51 (54)
T ss_dssp HHHHCTTSCHHHHHHHHSCSSCSHHHHHHHHHH
T ss_pred HHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 344556889999999999999999999988754
No 19
>d2k0bx1 a.5.2.1 (X:1-52) Sequestosome 1 (Sqstm1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.24 E-value=3.5 Score=24.75 Aligned_cols=22 Identities=18% Similarity=0.447 Sum_probs=19.6
Q ss_pred HHHHHHHhhcCCCHHHHHHHHH
Q 019880 35 DTLVRFLKARDWNVSKAHKMLV 56 (334)
Q Consensus 35 ~~LlRFLra~~~dv~kA~~~l~ 56 (334)
.+|.+.|.++++|+.+|...|.
T Consensus 27 GWLt~LL~skn~dI~~aLD~iq 48 (52)
T d2k0bx1 27 GWLTRLLQTKNYDIGAALDTIQ 48 (52)
T ss_dssp SCHHHHHHHTTSCHHHHHHHTT
T ss_pred hHHHHHHHHcCCCHHHHHHHHh
Confidence 3999999999999999998763
No 20
>d1veja1 a.5.2.1 (A:8-68) 4931431F19Rik {Mouse (Mus musculus) [TaxId: 10090]}
Probab=47.68 E-value=9.4 Score=23.79 Aligned_cols=24 Identities=29% Similarity=0.329 Sum_probs=21.1
Q ss_pred ChHHHHHHHhhcCCCHHHHHHHHH
Q 019880 33 PTDTLVRFLKARDWNVSKAHKMLV 56 (334)
Q Consensus 33 ~d~~LlRFLra~~~dv~kA~~~l~ 56 (334)
|++.-++-|++.++||+.|++.|.
T Consensus 36 d~~~Nl~AL~~t~Gdv~~Aie~Ll 59 (61)
T d1veja1 36 NRDANLQALVATDGDIHAAIEMLL 59 (61)
T ss_dssp CHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHh
Confidence 566779999999999999999875
No 21
>d1oqya1 a.5.2.1 (A:160-200) DNA repair protein Hhr23a {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.46 E-value=4.7 Score=23.07 Aligned_cols=26 Identities=27% Similarity=0.267 Sum_probs=22.4
Q ss_pred CCCChHHHHHHHhhcCCCHHHHHHHH
Q 019880 30 QGNPTDTLVRFLKARDWNVSKAHKML 55 (334)
Q Consensus 30 ~~~~d~~LlRFLra~~~dv~kA~~~l 55 (334)
=+++.....+=|++.++|+++|..-|
T Consensus 14 MGF~~~~a~~AL~~~~~N~e~A~~~L 39 (41)
T d1oqya1 14 MGYERERVVAALRASYNNPHRAVEYL 39 (41)
T ss_dssp TTCCSHHHHHHHHHSCSSTTHHHHTT
T ss_pred cCCCHHHHHHHHHHhCCCHHHHHHHH
Confidence 46888899999999999999998754
No 22
>d1wgna_ a.5.2.1 (A:) Ubiquitin-associated protein 1, UBAP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.19 E-value=9.1 Score=23.98 Aligned_cols=28 Identities=18% Similarity=0.296 Sum_probs=24.1
Q ss_pred CCChHHHHHHHhhcCCCHHHHHHHHHHH
Q 019880 31 GNPTDTLVRFLKARDWNVSKAHKMLVDC 58 (334)
Q Consensus 31 ~~~d~~LlRFLra~~~dv~kA~~~l~~~ 58 (334)
+++.....+=|+++++|++.|+..|-.+
T Consensus 30 GF~~~~a~~AL~~~~~n~e~A~~~Lls~ 57 (63)
T d1wgna_ 30 GYSYECVLRAMKKKGENIEQILDYLFAH 57 (63)
T ss_dssp HCCHHHHHHHHHHHCSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCHHHHHHHHHhC
Confidence 5788889999999999999999887653
No 23
>d1vdla_ a.5.2.1 (A:) Ubiquitin carboxyl-terminal hydrolase 25 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=36.49 E-value=25 Score=22.58 Aligned_cols=25 Identities=24% Similarity=0.212 Sum_probs=21.4
Q ss_pred ChHHHHHHHhhcCCCHHHHHHHHHH
Q 019880 33 PTDTLVRFLKARDWNVSKAHKMLVD 57 (334)
Q Consensus 33 ~d~~LlRFLra~~~dv~kA~~~l~~ 57 (334)
|-.+|..-|+|.++|+..|+..|.+
T Consensus 39 D~q~L~~ALkas~Gdl~~AV~~LT~ 63 (80)
T d1vdla_ 39 DAQILQQALKDSNGNLELAVAFLTA 63 (80)
T ss_dssp CHHHHHHHHHHHTSCHHHHHHHHHT
T ss_pred cHHHHHHHHHhcCCCHHHHHHHHhc
Confidence 3458999999999999999998854
No 24
>d1oaia_ a.5.2.3 (A:) FG-binding, C-terminal domain of TAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.12 E-value=31 Score=21.04 Aligned_cols=27 Identities=11% Similarity=0.377 Sum_probs=24.2
Q ss_pred CCChHHHHHHHhhcCCCHHHHHHHHHH
Q 019880 31 GNPTDTLVRFLKARDWNVSKAHKMLVD 57 (334)
Q Consensus 31 ~~~d~~LlRFLra~~~dv~kA~~~l~~ 57 (334)
+.+-.+-.++|...+||.++|.+.+..
T Consensus 19 ~mn~e~s~~cLe~~~Wd~~~A~~~F~~ 45 (59)
T d1oaia_ 19 GMNLEWSQKCLQDNNWDYTRSAQAFTH 45 (59)
T ss_dssp CCCHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 577889999999999999999998865
No 25
>d1ijwc_ a.4.1.2 (C:) HIN recombinase (DNA-binding domain) {Synthetic}
Probab=34.41 E-value=32 Score=19.86 Aligned_cols=39 Identities=26% Similarity=0.314 Sum_probs=27.2
Q ss_pred chHHHHHHHHHHHhhcc--HHHHHHhhhhcCCCChHHHHHHHhhcC
Q 019880 2 AHQEEIKQFQTLMEDLD--DSLKETFKNVHQGNPTDTLVRFLKARD 45 (334)
Q Consensus 2 ~~~~~i~~lr~~l~~~~--~~l~~~~~~~~~~~~d~~LlRFLra~~ 45 (334)
.+++++++.|+++++-. .++-.. -+.....|+|||-|+.
T Consensus 6 lt~~q~~~a~~l~~~G~s~~~iA~~-----~gVSr~TiYry~pa~~ 46 (47)
T d1ijwc_ 6 INKHEQEQISRLLEKGHPRQQLAII-----FGIGVSTLYRYFPASS 46 (47)
T ss_dssp SCHHHHHHHHHHHHTTCCHHHHHHH-----HTCCHHHHHHHSCSTT
T ss_pred CCHHHHHHHHHHHHCCCCHHHHHHH-----HCcCHHHHHhhCCccc
Confidence 36789999999998752 222222 3577889999987653
No 26
>d1wjia_ a.5.2.1 (A:) Tudor domain containing protein 3, TDRD3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.02 E-value=30 Score=21.32 Aligned_cols=29 Identities=17% Similarity=0.171 Sum_probs=24.1
Q ss_pred CCCChHHHHHHHhhcCCCHHHHHHHHHHH
Q 019880 30 QGNPTDTLVRFLKARDWNVSKAHKMLVDC 58 (334)
Q Consensus 30 ~~~~d~~LlRFLra~~~dv~kA~~~l~~~ 58 (334)
-+++.....|=|++++.|+++|+.-|-.+
T Consensus 19 MGF~~~~a~~AL~~~~~~~e~A~~wL~~~ 47 (63)
T d1wjia_ 19 MGFSKEASRQALMDNGNNLEAALNVLLTS 47 (63)
T ss_dssp TTCCHHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHhCCCHHHHHHHHHHC
Confidence 46888888999999999999998877664
No 27
>d2g3qa1 a.5.2.1 (A:1339-1381) Endocytic protein Ede1, YBL047C {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=26.91 E-value=33 Score=19.39 Aligned_cols=27 Identities=19% Similarity=0.409 Sum_probs=22.6
Q ss_pred CCCChHHHHHHHhhcCCCHHHHHHHHH
Q 019880 30 QGNPTDTLVRFLKARDWNVSKAHKMLV 56 (334)
Q Consensus 30 ~~~~d~~LlRFLra~~~dv~kA~~~l~ 56 (334)
=+++++.-.+-|.-++||.+.|...|.
T Consensus 14 MGF~e~~A~~AL~k~~wnleaAtN~LL 40 (43)
T d2g3qa1 14 MGFTEEEAHNALEKCNWDLEAATNFLL 40 (43)
T ss_dssp TTSCHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHcCCCHHHHHHHHH
Confidence 467888888999999999999987764
No 28
>d1wiva_ a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=25.73 E-value=31 Score=21.98 Aligned_cols=27 Identities=26% Similarity=0.316 Sum_probs=20.2
Q ss_pred CCChHHHHHHHhhcCCCHHHHHHHHHH
Q 019880 31 GNPTDTLVRFLKARDWNVSKAHKMLVD 57 (334)
Q Consensus 31 ~~~d~~LlRFLra~~~dv~kA~~~l~~ 57 (334)
+++.....+-|+++++|++.|+.-|-.
T Consensus 40 GF~~~~a~~AL~~~~~n~e~Av~~Lls 66 (73)
T d1wiva_ 40 GFAEDVARKALKASGGDIEKATDWVFN 66 (73)
T ss_dssp TCCHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCHHHHHHHHHc
Confidence 567777788888888888888776643
No 29
>d1umqa_ a.4.1.12 (A:) Photosynthetic apparatus regulatory protein PprA (RegA), DNA-binding domain {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=25.49 E-value=29 Score=21.08 Aligned_cols=22 Identities=27% Similarity=0.346 Sum_probs=20.3
Q ss_pred hHHHHHHHhhcCCCHHHHHHHH
Q 019880 34 TDTLVRFLKARDWNVSKAHKML 55 (334)
Q Consensus 34 d~~LlRFLra~~~dv~kA~~~l 55 (334)
...+.+-|..++||+.+|.++|
T Consensus 22 r~~I~~aL~~~~gn~~~aA~~L 43 (60)
T d1umqa_ 22 WEHIQRIYEMCDRNVSETARRL 43 (60)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHHHHhcCcHHHHHHHH
Confidence 4689999999999999999997
No 30
>d2q3la1 c.13.2.2 (A:1-125) Uncharacterized protein Shew3102 {Shewanella loihica [TaxId: 359303]}
Probab=24.16 E-value=22 Score=25.20 Aligned_cols=50 Identities=16% Similarity=0.098 Sum_probs=35.7
Q ss_pred EeCCCCcccccch-hHHHHHHHHhhhccCcccccceEEEcCChhhHHHHHHHcccCChh
Q 019880 154 LDMTGLKLSALNQ-IKLMTVITTIDDLNYPEKTETYYIVNAPYIFSACWKVVKPLLQER 211 (334)
Q Consensus 154 iDl~g~~l~~~~~-~~~~~~i~~i~~~~YPerl~~i~ivN~P~~f~~~~~~vkpfL~~~ 211 (334)
-|+.|+++..++. +++. . .|. ..+.++-||-.+.|...+-++.+||++..
T Consensus 60 ~~F~G~~~~A~~ed~k~~---~----~h~-~~f~RiAiV~d~~W~~~~~~~~~~f~~~e 110 (125)
T d2q3la1 60 TELDGLSLHAAWDDLKLG---L----KHG-KEFKRVAIIGQGELQEWATRVANWFTPGE 110 (125)
T ss_dssp EEEEEECHHHHHHHHHHH---H----HHG-GGEEEEEEECCSHHHHHHHHHHHHHCSSE
T ss_pred CCCCCCCHHHHHHHHHhH---H----hhh-ccccEEEEEcChHHHHHHHHHHhhccCCc
Confidence 3567777665532 2221 1 133 67899999999999999999999999853
No 31
>d3e46a1 a.5.2.1 (A:157-198) Ubiquitin-conjugating enzyme E2-25 kDa, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.80 E-value=54 Score=17.71 Aligned_cols=26 Identities=23% Similarity=0.570 Sum_probs=22.1
Q ss_pred CCCChHHHHHHHhhcCCCHHHHHHHH
Q 019880 30 QGNPTDTLVRFLKARDWNVSKAHKML 55 (334)
Q Consensus 30 ~~~~d~~LlRFLra~~~dv~kA~~~l 55 (334)
-+++..-++--|.+..|||+.|.+.|
T Consensus 16 ~gf~knavi~alsskswdvetatell 41 (42)
T d3e46a1 16 AGFDRNAVIVALSSKSWDVETATELL 41 (42)
T ss_dssp TTCCHHHHHHHHHHTTTCHHHHHHHH
T ss_pred ccccccceeeeeccCccchhhHHHhh
Confidence 46788888888999999999998775
No 32
>d2oo3a1 c.66.1.59 (A:9-279) Uncharacterized protein LPG1296 {Legionella pneumophila [TaxId: 446]}
Probab=22.68 E-value=14 Score=30.27 Aligned_cols=25 Identities=32% Similarity=0.509 Sum_probs=18.4
Q ss_pred cceEEEcCChhhHHHHHHHcccCCh
Q 019880 186 ETYYIVNAPYIFSACWKVVKPLLQE 210 (334)
Q Consensus 186 ~~i~ivN~P~~f~~~~~~vkpfL~~ 210 (334)
..++|||+||-+.....-+-|+|.+
T Consensus 229 SGm~iiNPPw~l~~~l~~~L~~L~~ 253 (271)
T d2oo3a1 229 CGLWIINPPYTFPSEIKLVLETLTT 253 (271)
T ss_dssp EEEEEESCCTTHHHHHHHHHHHHHH
T ss_pred eEEEEECCCccHHHHHHHHHHHHHH
Confidence 3589999999998776666555443
Done!