BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019883
(334 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255542114|ref|XP_002512121.1| DNA binding protein, putative [Ricinus communis]
gi|223549301|gb|EEF50790.1| DNA binding protein, putative [Ricinus communis]
Length = 336
Score = 496 bits (1276), Expect = e-138, Method: Compositional matrix adjust.
Identities = 249/335 (74%), Positives = 276/335 (82%), Gaps = 7/335 (2%)
Query: 1 MVQVLSLSTLTTSGNGGFYGSPALWR-RHFKLLEKSR--IGIDRPCFCHQFVQGLHLRVT 57
MVQ LSL+ LT S N G S WR RHFKL+ ++ GIDR HQ VQ L+
Sbjct: 1 MVQNLSLNALTVSRNCGICVSLPSWRGRHFKLVRRTHNAFGIDR----HQLVQSLYFMGN 56
Query: 58 FNLLRQRNLRANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEE 117
NL R RNLR AGWLF G ++ +AS ERSESANEDIL FFFQLDLATRVQ ALN E+
Sbjct: 57 PNLSRHRNLRVEAGWLFNRGGNQESEASCERSESANEDILIFFFQLDLATRVQYALNTEQ 116
Query: 118 YDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALA 177
YDIAQQLRNKLTEVE E+ RQ EAKRG SSKSEAQDKALSIIRLRADLQ AI++ENYA+A
Sbjct: 117 YDIAQQLRNKLTEVEAEVIRQQEAKRGSSSKSEAQDKALSIIRLRADLQNAIENENYAMA 176
Query: 178 ADLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSS 237
A LRDQI KLEAESLAAS ALA+ENA++AFRLGQKV HK FGY+AV+CGMDPVCCESSS
Sbjct: 177 AQLRDQISKLEAESLAASVNALAYENAQYAFRLGQKVTHKTFGYQAVVCGMDPVCCESSS 236
Query: 238 WMEIAQVEKLQQGPSQPFYQVLVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFL 297
WME AQVEKL +G +QPFYQVLVDVHADPN+LVAYVAEENL+A +QPD+ RFDHPY+SFL
Sbjct: 237 WMETAQVEKLSRGSNQPFYQVLVDVHADPNLLVAYVAEENLVAPEQPDLGRFDHPYVSFL 296
Query: 298 FYGTDTAGDFIPIKQLREKYNRPRYEVPTDPEDEE 332
FYGTDTAGDFIPIKQLREKYNRPR+EVP DP DE+
Sbjct: 297 FYGTDTAGDFIPIKQLREKYNRPRHEVPFDPPDED 331
>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 244/335 (72%), Positives = 275/335 (82%), Gaps = 4/335 (1%)
Query: 1 MVQVLSLSTLTTSGNGGFYGSPALWRRHFKLLEKSRI--GIDRPCFCHQFVQGLHLRVTF 58
MVQ +S+STLTTSGNGG YGS ALW RHF+L+ K++I G +R H Q L
Sbjct: 1 MVQCVSVSTLTTSGNGGVYGSTALWGRHFQLMRKTQIRTGSERNFLWHHCAQRLFFAGQL 60
Query: 59 NLLRQRNLRANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEY 118
+ RQRNLR AGWLFKGG D+GLDASSE SESANEDIL FFFQLDLATRVQ ALN E+Y
Sbjct: 61 VMQRQRNLRVEAGWLFKGGGDQGLDASSECSESANEDILIFFFQLDLATRVQYALNTEQY 120
Query: 119 DIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAA 178
+IAQQLR+KLTEVE E+ +Q EAKRG +SKSEAQDKALS+IRLRADLQKAI++ENYALAA
Sbjct: 121 EIAQQLRDKLTEVEAEVVKQREAKRGSTSKSEAQDKALSMIRLRADLQKAIEAENYALAA 180
Query: 179 DLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSW 238
+LRD+I KLEAESLAASA AL +EN +AFRLGQKV HK+FGY AVICGMDPVCCESSSW
Sbjct: 181 ELRDEINKLEAESLAASANALVYENTPYAFRLGQKVRHKVFGYSAVICGMDPVCCESSSW 240
Query: 239 MEIAQVEKLQQGPSQPFYQVLVDVHADPNILVAYVAEENLLASD--QPDMARFDHPYISF 296
E A V+KL +G +QPFYQVLVDVH DPN+LVAYV EENLL D +P+ RFDHPY+SF
Sbjct: 241 RESAHVDKLTRGSNQPFYQVLVDVHVDPNLLVAYVPEENLLVPDGPRPNKGRFDHPYLSF 300
Query: 297 LFYGTDTAGDFIPIKQLREKYNRPRYEVPTDPEDE 331
LFYG D AGDFIPIKQLREKYNRPR+EVP DP E
Sbjct: 301 LFYGMDAAGDFIPIKQLREKYNRPRHEVPGDPPGE 335
>gi|225423547|ref|XP_002274826.1| PREDICTED: uncharacterized protein LOC100266199 [Vitis vinifera]
gi|297738051|emb|CBI27252.3| unnamed protein product [Vitis vinifera]
Length = 340
Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust.
Identities = 244/335 (72%), Positives = 275/335 (82%), Gaps = 4/335 (1%)
Query: 1 MVQVLSLSTLTTSGNGGFYGSPALWRRHFKLLEKSRI--GIDRPCFCHQFVQGLHLRVTF 58
MVQ +S+STLTTSGNGG YGS ALW RHF+L+ K++I G +R H Q L
Sbjct: 1 MVQCVSVSTLTTSGNGGVYGSTALWGRHFQLMRKTQIRTGSERNFLWHHCAQRLFFAGQL 60
Query: 59 NLLRQRNLRANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEY 118
+ RQRNLR AGWLFKGG D+GLDASSE SESANEDIL FFFQLDLATRVQ ALN E+Y
Sbjct: 61 VMQRQRNLRVEAGWLFKGGGDQGLDASSECSESANEDILIFFFQLDLATRVQYALNTEQY 120
Query: 119 DIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAA 178
+IAQQLR+KLTEVE E+ +Q EAKRG +SKSEAQDKALS+IRLRADLQKAI++ENYALAA
Sbjct: 121 EIAQQLRDKLTEVEAEVVKQREAKRGSTSKSEAQDKALSMIRLRADLQKAIEAENYALAA 180
Query: 179 DLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSW 238
+LRD+I KLEAESLAASA AL +EN +AFRLGQKV HK+FGY AVICGMDPVCCESSSW
Sbjct: 181 ELRDEINKLEAESLAASANALVYENTPYAFRLGQKVRHKVFGYSAVICGMDPVCCESSSW 240
Query: 239 MEIAQVEKLQQGPSQPFYQVLVDVHADPNILVAYVAEENLLASD--QPDMARFDHPYISF 296
E A V+KL +G +QPFYQVLVDVH DPN+LVAYV EENLL D +P+ RFDHPY+SF
Sbjct: 241 RESAHVDKLTRGSNQPFYQVLVDVHVDPNLLVAYVPEENLLVPDGPRPNKGRFDHPYLSF 300
Query: 297 LFYGTDTAGDFIPIKQLREKYNRPRYEVPTDPEDE 331
LFYG D AGDFIPIKQLREKYNRPR+EVP DP E
Sbjct: 301 LFYGMDAAGDFIPIKQLREKYNRPRHEVPGDPPGE 335
>gi|356499859|ref|XP_003518753.1| PREDICTED: uncharacterized protein LOC100794023 [Glycine max]
Length = 327
Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/334 (69%), Positives = 271/334 (81%), Gaps = 9/334 (2%)
Query: 1 MVQVLSLSTLTTSGNGGFYGSPALWRRHFKLLEKSRIGID--RPCFCHQFVQGLHLRVTF 58
MVQV+SLSTL T GN GS W F+ ++S+I R + VQ L L
Sbjct: 1 MVQVVSLSTLATCGNSRLCGSSPSWMAPFEPYKRSQITSSNGRHLVWNNSVQSLFL---- 56
Query: 59 NLLRQRNLRANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEY 118
R + RA A W+F+GG ++GLDASSE SESANEDIL FFFQLDLATRVQ ALNME+Y
Sbjct: 57 --TRHSDFRAEAAWMFRGG-EQGLDASSEHSESANEDILMFFFQLDLATRVQYALNMEQY 113
Query: 119 DIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAA 178
DIA+QLRNKL EVEEE+ +Q ++KRGLSSK EAQDKA+SIIRLR+DLQKAI++E+YALAA
Sbjct: 114 DIAKQLRNKLAEVEEEVIKQQQSKRGLSSKGEAQDKAISIIRLRSDLQKAIENEDYALAA 173
Query: 179 DLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSW 238
+LRD+I KLEAESLAASATALA ENA++AFRLGQKV HK FGYRAVICGMDPVC ESSSW
Sbjct: 174 ELRDEISKLEAESLAASATALAHENAQYAFRLGQKVRHKKFGYRAVICGMDPVCSESSSW 233
Query: 239 MEIAQVEKLQQGPSQPFYQVLVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLF 298
ME AQV+KL +G +QPFYQVLVDVHA+PN+LVAYV EENLL D+PD RFDHPYISFLF
Sbjct: 234 MENAQVKKLSRGSAQPFYQVLVDVHAEPNLLVAYVPEENLLTPDKPDTGRFDHPYISFLF 293
Query: 299 YGTDTAGDFIPIKQLREKYNRPRYEVPTDPEDEE 332
YG D+AGDFIPIKQLREKYN+PR+E+P DP ++E
Sbjct: 294 YGMDSAGDFIPIKQLREKYNKPRHEIPIDPPNDE 327
>gi|449452875|ref|XP_004144184.1| PREDICTED: uncharacterized protein LOC101203572 [Cucumis sativus]
Length = 336
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/336 (65%), Positives = 261/336 (77%), Gaps = 5/336 (1%)
Query: 1 MVQVLSLSTLTTSGNGGFYGSPALWRRHFKLLEKSRIG--IDRPCFCHQFVQGLHLRVTF 58
MVQ LS+ +T G+ YGS WRR+FK +++ + R CF HQ ++ L
Sbjct: 1 MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQP 60
Query: 59 NLLRQRNLRANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEY 118
++ + + AGWLFKGG ERSE+AN DIL FFFQLDLATRVQ ALN+E+Y
Sbjct: 61 RRSKRGSFKIRAGWLFKGGGQES-GGRIERSENANNDILIFFFQLDLATRVQYALNIEQY 119
Query: 119 DIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAA 178
+IAQ+LR KLTEVE E+ +Q E+K+GL+SKSE QDK L+IIRLRADLQKA++SENYALAA
Sbjct: 120 EIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLRADLQKAVESENYALAA 179
Query: 179 DLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSW 238
LRD+I KLE +SLAASA LA+E+A ++FRLGQKV HKIFGYR VICGMDPVCCESSSW
Sbjct: 180 QLRDEISKLETDSLAASAKVLAYESAEYSFRLGQKVRHKIFGYRGVICGMDPVCCESSSW 239
Query: 239 MEIAQVEKLQQGPSQPFYQVLVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLF 298
MEIAQVEKL +G +QPFYQVLVDV DP++LVAYVAEENLLA ++PD RFDHPY SFLF
Sbjct: 240 MEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLAPEEPDTERFDHPYSSFLF 299
Query: 299 YGTDTAGDFIPIKQLREKYNRPRYEVPTDPEDEELQ 334
YG D+AGDFIPIKQLREKYNRPRYEVP ED+E Q
Sbjct: 300 YGVDSAGDFIPIKQLREKYNRPRYEVPF--EDDEQQ 333
>gi|42568906|ref|NP_178438.2| uvrB/uvrC motif-containing protein [Arabidopsis thaliana]
gi|51971212|dbj|BAD44298.1| unknown protein [Arabidopsis thaliana]
gi|51971335|dbj|BAD44332.1| unknown protein [Arabidopsis thaliana]
gi|330250601|gb|AEC05695.1| uvrB/uvrC motif-containing protein [Arabidopsis thaliana]
Length = 330
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/333 (66%), Positives = 257/333 (77%), Gaps = 4/333 (1%)
Query: 1 MVQVLSLSTLTTSGNGGFYGSPALWRRHFKLLEKSRIGIDRPCFCHQFVQGLHLRVTFNL 60
MVQ SLSTLT G+ +L R ++ S + DR C + R +
Sbjct: 1 MVQSQSLSTLTICGS---VKVSSLLRNRLNSVKASSLIGDRCVSCQFLRKSPSFRSHWKS 57
Query: 61 LRQRNL-RANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEYD 119
L+QRNL R A W F+GG ++GLD SSERSESANEDIL FFFQLDLATRVQ A+N+E+YD
Sbjct: 58 LKQRNLLRVEARWPFQGGGEQGLDPSSERSESANEDILIFFFQLDLATRVQYAMNLEQYD 117
Query: 120 IAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAAD 179
IAQQLR KLTEVEEE R E KRG S+KSEAQDK +SIIRLRADLQ AIDSE+Y LAA
Sbjct: 118 IAQQLREKLTEVEEESIRLQEGKRGSSAKSEAQDKGISIIRLRADLQNAIDSEDYGLAAK 177
Query: 180 LRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWM 239
LRD+I KLEAESLA SA ALAFE A +AFRLGQK+ HK FGYRAV+CGMDP+C ESSSWM
Sbjct: 178 LRDEISKLEAESLAVSAKALAFEKAEYAFRLGQKLRHKTFGYRAVVCGMDPICSESSSWM 237
Query: 240 EIAQVEKLQQGPSQPFYQVLVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFY 299
E A+VEKL +G +QPFYQVLVDV P++LVAYVAE+NLLA ++PD RFDHPYISFL+Y
Sbjct: 238 EAAEVEKLPRGSNQPFYQVLVDVRTHPDLLVAYVAEDNLLAPEKPDKERFDHPYISFLYY 297
Query: 300 GTDTAGDFIPIKQLREKYNRPRYEVPTDPEDEE 332
G DTAGDFIP+KQLREKYNRPR+EVP D +DE+
Sbjct: 298 GADTAGDFIPVKQLREKYNRPRHEVPFDSQDED 330
>gi|297817996|ref|XP_002876881.1| hypothetical protein ARALYDRAFT_904615 [Arabidopsis lyrata subsp.
lyrata]
gi|297322719|gb|EFH53140.1| hypothetical protein ARALYDRAFT_904615 [Arabidopsis lyrata subsp.
lyrata]
Length = 331
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/334 (65%), Positives = 257/334 (76%), Gaps = 5/334 (1%)
Query: 1 MVQVLSLSTLTTSGNGGFYGSPALWRRHFKLLEKSRIGIDRPCFCHQFVQGLHLRVTFNL 60
MVQ SLSTLT G+ +L R + S + DR C + R +
Sbjct: 1 MVQSQSLSTLTICGS---VKVSSLLRNRLNSSKASSLIGDRCVSCQFLRKSPSFRSHWKS 57
Query: 61 LRQRNL-RANAGWLFKGGS-DRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEY 118
++QRNL R A W F+GG ++GLD SSERSESANEDIL FFFQLDLATRVQ A+N+E+Y
Sbjct: 58 IKQRNLLRVEARWPFQGGGGEQGLDPSSERSESANEDILIFFFQLDLATRVQYAMNLEQY 117
Query: 119 DIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAA 178
DIAQQLR KLTEVEEE R E KRG S+KSEAQDK +SIIRLRADLQ AIDSE+Y LAA
Sbjct: 118 DIAQQLREKLTEVEEESIRLQEGKRGSSAKSEAQDKGISIIRLRADLQNAIDSEDYGLAA 177
Query: 179 DLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSW 238
LRD+I KLEAESLA SA ALAFENA +AFRLGQK+ HK FGYRAV+CGMDP+CCESSSW
Sbjct: 178 KLRDEISKLEAESLAVSAKALAFENAEYAFRLGQKLRHKTFGYRAVVCGMDPICCESSSW 237
Query: 239 MEIAQVEKLQQGPSQPFYQVLVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLF 298
ME A+VEKL +G +QPFYQVLVD P+++VAYVAE+NLLA ++PD RFDHPYISFL+
Sbjct: 238 MEAAEVEKLPRGSNQPFYQVLVDARTHPDLVVAYVAEDNLLAPEKPDKERFDHPYISFLY 297
Query: 299 YGTDTAGDFIPIKQLREKYNRPRYEVPTDPEDEE 332
YG DTAGDFIP+KQLREKYNRPR+EVP D ++E+
Sbjct: 298 YGADTAGDFIPVKQLREKYNRPRHEVPFDSQEED 331
>gi|356494893|ref|XP_003516316.1| PREDICTED: uncharacterized protein LOC100783767 [Glycine max]
Length = 303
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/274 (75%), Positives = 240/274 (87%), Gaps = 2/274 (0%)
Query: 60 LLRQRNLRANAGWLFKGGSDRGLDASSERSESANEDIL-FFFFQLDLATRVQCALNMEEY 118
L R RA A W+F+GG ++GLD SSE SESANEDIL FFFFQLDLATRVQ ALNME+Y
Sbjct: 31 LTRHSGFRAEAAWMFRGG-EQGLDVSSEHSESANEDILMFFFFQLDLATRVQYALNMEQY 89
Query: 119 DIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAA 178
DIA+QLRNKL EVEEE+ +Q ++KRGLSSKSEAQDKA+SIIRL +DLQ AI++E+YALAA
Sbjct: 90 DIAKQLRNKLAEVEEEVIKQQQSKRGLSSKSEAQDKAISIIRLHSDLQNAIENEHYALAA 149
Query: 179 DLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSW 238
+LRD+I KLEAESLAASA ALA ENA++AFRLGQKV HK FGY+AVICGMDPVC ESSSW
Sbjct: 150 ELRDEISKLEAESLAASAKALAHENAQYAFRLGQKVRHKKFGYKAVICGMDPVCSESSSW 209
Query: 239 MEIAQVEKLQQGPSQPFYQVLVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLF 298
ME AQV+KL +G +QPFYQVLVDVHA+PN+LVAYV EENLL D+PD RFDHPYISFLF
Sbjct: 210 MENAQVKKLSRGSAQPFYQVLVDVHAEPNLLVAYVPEENLLTPDKPDKGRFDHPYISFLF 269
Query: 299 YGTDTAGDFIPIKQLREKYNRPRYEVPTDPEDEE 332
YG D+AGDFIPIKQLREKYN+PR+E+P DP ++E
Sbjct: 270 YGMDSAGDFIPIKQLREKYNKPRHEIPIDPPNDE 303
>gi|413952331|gb|AFW84980.1| hypothetical protein ZEAMMB73_938746 [Zea mays]
gi|413952332|gb|AFW84981.1| hypothetical protein ZEAMMB73_938746 [Zea mays]
gi|413952333|gb|AFW84982.1| hypothetical protein ZEAMMB73_938746 [Zea mays]
Length = 334
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/308 (64%), Positives = 235/308 (76%), Gaps = 12/308 (3%)
Query: 35 SRIGIDRPCFCHQFVQGLHLRVTF--------NLLRQRN--LRANAGWLFKGGSDRGLDA 84
+R + PC + QGLH + N R+ N ++ NA WLF GG R DA
Sbjct: 24 ARNDVRLPCEVNAVSQGLHSLHWWCAHKPQMKNNGRRMNAAVKTNARWLF-GGDGRSNDA 82
Query: 85 SSERSESANEDILFFFFQLDLATRVQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRG 144
ERSESANEDIL F+FQ+DL TR+Q ALN+E++D+A+QLR KLTE+E EI RQ EA+RG
Sbjct: 83 RLERSESANEDILIFYFQMDLQTRIQYALNIEQFDVAKQLREKLTEIETEIIRQREARRG 142
Query: 145 LSSKSEAQDKALSIIRLRADLQKAIDSENYALAADLRDQICKLEAESLAASATALAFENA 204
S K+EAQDKAL++IR+RADLQKAIDSENYALAA LRD I KLE ESLA SA ALA++N
Sbjct: 143 -SPKTEAQDKALNLIRVRADLQKAIDSENYALAAGLRDDIAKLEVESLAVSAKALAYQNV 201
Query: 205 RFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHA 264
++AFRLGQKV H I GYR VICGMDPVCCES SWME A VEKL +GP+QPFYQVLVDV+
Sbjct: 202 KYAFRLGQKVRHNIHGYRGVICGMDPVCCESKSWMETANVEKLSKGPNQPFYQVLVDVYV 261
Query: 265 DPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKYNRPRYEV 324
DP +LVAYVAEENL A+++ + RFDHPYI FLFYG DTAGDFIPIKQLREKY++PRYE
Sbjct: 262 DPELLVAYVAEENLSAAEESEKGRFDHPYIEFLFYGEDTAGDFIPIKQLREKYDQPRYEA 321
Query: 325 PTDPEDEE 332
D D +
Sbjct: 322 SGDESDND 329
>gi|125527819|gb|EAY75933.1| hypothetical protein OsI_03852 [Oryza sativa Indica Group]
gi|125572130|gb|EAZ13645.1| hypothetical protein OsJ_03562 [Oryza sativa Japonica Group]
Length = 275
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/260 (71%), Positives = 219/260 (84%), Gaps = 3/260 (1%)
Query: 65 NLRANAGWLFKGGSDRGL-DASSERSESANEDILFFFFQLDLATRVQCALNMEEYDIAQQ 123
+R NA WLF GG DR +A ERSESANEDIL F+FQLDL TR+Q ALN+E++D+A+Q
Sbjct: 4 TVRTNAKWLF-GGDDRSSSNARLERSESANEDILIFYFQLDLQTRIQYALNIEQFDVAKQ 62
Query: 124 LRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAADLRDQ 183
LR KLTE+E EI RQ EAKRG SSK+EAQDKA++++R+RADLQKA+DSENYALAA LRD+
Sbjct: 63 LREKLTEIETEIIRQREAKRG-SSKTEAQDKAINLLRVRADLQKAVDSENYALAAALRDE 121
Query: 184 ICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQ 243
I KLE ESLA SA ALA++N +AFRLGQKV HK+ GYRAVICGMDPVCCES SWME A
Sbjct: 122 IAKLETESLAVSAKALAYQNVEYAFRLGQKVRHKVHGYRAVICGMDPVCCESKSWMETAN 181
Query: 244 VEKLQQGPSQPFYQVLVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDT 303
VE L +GP+QPFYQVLVDV+ADP +LVAYVAEENL ++ + RFDHPYI FLF+G DT
Sbjct: 182 VENLSKGPNQPFYQVLVDVYADPELLVAYVAEENLAEAEISEKGRFDHPYIEFLFFGEDT 241
Query: 304 AGDFIPIKQLREKYNRPRYE 323
AGDFIPIKQLREKY++PRYE
Sbjct: 242 AGDFIPIKQLREKYDQPRYE 261
>gi|115475007|ref|NP_001061100.1| Os08g0172200 [Oryza sativa Japonica Group]
gi|40253874|dbj|BAD05809.1| unknown protein [Oryza sativa Japonica Group]
gi|113623069|dbj|BAF23014.1| Os08g0172200 [Oryza sativa Japonica Group]
Length = 334
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/275 (68%), Positives = 223/275 (81%), Gaps = 2/275 (0%)
Query: 49 VQGLHLRVTFNLLRQRNLRANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATR 108
V+ LH+R + +R NA WLF G +A ERSESANEDIL F+FQLDL TR
Sbjct: 48 VKKLHMRTNRRQM-GTTVRTNARWLFGGDGRSSSNARMERSESANEDILIFYFQLDLQTR 106
Query: 109 VQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKA 168
+Q ALN+E++D+A+QLR KLTE+E I RQ EAKRG SSK+EAQDKA++++R+RADLQKA
Sbjct: 107 IQYALNIEQFDVAKQLREKLTEIETVIIRQREAKRG-SSKTEAQDKAINLLRVRADLQKA 165
Query: 169 IDSENYALAADLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGM 228
+DSENYALAA LRD+I KLE ESLA SA ALA++N ++AFRLGQKV HK+ GYRAVICGM
Sbjct: 166 VDSENYALAAALRDEIAKLETESLAVSAKALAYQNVKYAFRLGQKVRHKVHGYRAVICGM 225
Query: 229 DPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPNILVAYVAEENLLASDQPDMAR 288
D VCCES SWME A VE L +GP+QPFYQVLVDV+ADP +LVAYVAEENL ++ P+ R
Sbjct: 226 DHVCCESKSWMETANVENLSKGPNQPFYQVLVDVYADPELLVAYVAEENLAEAEIPEKGR 285
Query: 289 FDHPYISFLFYGTDTAGDFIPIKQLREKYNRPRYE 323
FDHPYI FLF+G DTAGDFIPIKQLREKY++PRYE
Sbjct: 286 FDHPYIEFLFFGEDTAGDFIPIKQLREKYDQPRYE 320
>gi|222639995|gb|EEE68127.1| hypothetical protein OsJ_26212 [Oryza sativa Japonica Group]
Length = 275
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/259 (70%), Positives = 216/259 (83%), Gaps = 1/259 (0%)
Query: 65 NLRANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEYDIAQQL 124
+R NA WLF G +A ERSESANEDIL F+FQLDL TR+Q ALN+E++D+A+QL
Sbjct: 4 TVRTNARWLFGGDGRSSSNARMERSESANEDILIFYFQLDLQTRIQYALNIEQFDVAKQL 63
Query: 125 RNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAADLRDQI 184
R KLTE+E I RQ EAKRG SSK+EAQDKA++++R+RADLQKA+DSENYALAA LRD+I
Sbjct: 64 REKLTEIETVIIRQREAKRG-SSKTEAQDKAINLLRVRADLQKAVDSENYALAAALRDEI 122
Query: 185 CKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQV 244
KLE ESLA SA ALA++N ++AFRLGQKV HK+ GYRAVICGMD VCCES SWME A V
Sbjct: 123 AKLETESLAVSAKALAYQNVKYAFRLGQKVRHKVHGYRAVICGMDHVCCESKSWMETANV 182
Query: 245 EKLQQGPSQPFYQVLVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTA 304
E L +GP+QPFYQVLVDV+ADP +LVAYVAEENL ++ P+ RFDHPYI FLF+G DTA
Sbjct: 183 ENLSKGPNQPFYQVLVDVYADPELLVAYVAEENLAEAEIPEKGRFDHPYIEFLFFGEDTA 242
Query: 305 GDFIPIKQLREKYNRPRYE 323
GDFIPIKQLREKY++PRYE
Sbjct: 243 GDFIPIKQLREKYDQPRYE 261
>gi|357136589|ref|XP_003569886.1| PREDICTED: uncharacterized protein LOC100832648 [Brachypodium
distachyon]
Length = 337
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/286 (66%), Positives = 227/286 (79%), Gaps = 5/286 (1%)
Query: 51 GLHLRVTFNLLRQRN-LRANAGWLFKG---GSDRGLDASSERSESANEDILFFFFQLDLA 106
G L N R N +R NA WLF G S+ +A ERSESANEDIL F+FQLDL
Sbjct: 48 GEKLHKKINSRRVGNTVRTNARWLFGGDGRNSNSNANARLERSESANEDILIFYFQLDLQ 107
Query: 107 TRVQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQ 166
TR+Q ALN+E++D A+QLR KLTE+E EI+RQ EAKRG SSK+EAQDK+++++R+RADLQ
Sbjct: 108 TRIQYALNIEQFDAAKQLREKLTEIETEITRQREAKRG-SSKNEAQDKSINLLRVRADLQ 166
Query: 167 KAIDSENYALAADLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVIC 226
KAI+SENYALAA+LRD I KLE ESLA SA ALA++N ++ FRLGQKV HK+ GYRAVIC
Sbjct: 167 KAIESENYALAAELRDAIAKLEGESLALSAKALAYQNVKYEFRLGQKVRHKVHGYRAVIC 226
Query: 227 GMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPNILVAYVAEENLLASDQPDM 286
GMDPVCCES SWME A VEKL +GP+QPFYQVLVDV+ADP +LVAYVAEENL A+ + +
Sbjct: 227 GMDPVCCESKSWMETANVEKLSKGPNQPFYQVLVDVYADPELLVAYVAEENLSAAGESEK 286
Query: 287 ARFDHPYISFLFYGTDTAGDFIPIKQLREKYNRPRYEVPTDPEDEE 332
RFDHPYI FLFYG DTA DFIPIKQLREKY++ RYE D D++
Sbjct: 287 GRFDHPYIEFLFYGEDTARDFIPIKQLREKYDQQRYEASGDENDDD 332
>gi|218200550|gb|EEC82977.1| hypothetical protein OsI_27993 [Oryza sativa Indica Group]
Length = 275
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/259 (70%), Positives = 215/259 (83%), Gaps = 1/259 (0%)
Query: 65 NLRANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEYDIAQQL 124
+R NA WLF G +A ERSESANEDIL F+FQLDL TR+Q ALN+E++D+A+QL
Sbjct: 4 TVRTNARWLFGGDGRSSSNARMERSESANEDILIFYFQLDLQTRIQYALNIEQFDVAKQL 63
Query: 125 RNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAADLRDQI 184
R KLTE+E I RQ EAKRG SSK+EAQDKA++++R+RADLQKA+DSENYALAA LRD+I
Sbjct: 64 REKLTEIETVIIRQREAKRG-SSKTEAQDKAINLLRVRADLQKAVDSENYALAAALRDEI 122
Query: 185 CKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQV 244
KLE ESLA SA ALA++N ++AFRLGQKV HK+ GYRAVICGMD VCCES SWME A V
Sbjct: 123 AKLETESLAVSAKALAYQNVKYAFRLGQKVRHKVHGYRAVICGMDHVCCESKSWMETANV 182
Query: 245 EKLQQGPSQPFYQVLVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTA 304
E L +GP+QPFYQVLVDV+ADP +LVAYVAEENL ++ + RFDHPYI FLF+G DTA
Sbjct: 183 ENLSKGPNQPFYQVLVDVYADPELLVAYVAEENLAEAEISEKGRFDHPYIEFLFFGEDTA 242
Query: 305 GDFIPIKQLREKYNRPRYE 323
GDFIPIKQLREKY++PRYE
Sbjct: 243 GDFIPIKQLREKYDQPRYE 261
>gi|326495156|dbj|BAJ85674.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 339
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/336 (56%), Positives = 237/336 (70%), Gaps = 7/336 (2%)
Query: 2 VQVLSLSTLTTSGNGGFYGSPALWRRHFKLLEKSRIGIDRPCFCHQFVQGLHLRVTFNLL 61
+Q +S+ S +G S + R + K C + LH+R +
Sbjct: 1 MQGISVCDSVVSPHGTSCRSACVARNDLRFCYKINPVSHGACAWRWCAEKLHVRTDRRKM 60
Query: 62 RQRNLRANAGWLFKG-----GSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNME 116
+R NA W F G SD A ERSESANEDIL F+FQLD+ TR+Q ALN+E
Sbjct: 61 NT-TVRTNARWFFGGDARNSNSDGNAKARLERSESANEDILIFYFQLDVQTRIQYALNIE 119
Query: 117 EYDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYAL 176
++D A+QLR KL E+E EI+RQ EAKRG SSK+EAQDK+L+++R ADLQKAI+SENYAL
Sbjct: 120 QFDAAKQLREKLAEMETEINRQREAKRG-SSKNEAQDKSLNLLRACADLQKAIESENYAL 178
Query: 177 AADLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESS 236
AA+LRD I KLE +SLA SA ALA+++ ++ FRLGQKV HK+ GYRAVICGMDPVCCES
Sbjct: 179 AAELRDTIAKLEGDSLALSAKALAYQSVKYEFRLGQKVRHKVHGYRAVICGMDPVCCESK 238
Query: 237 SWMEIAQVEKLQQGPSQPFYQVLVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISF 296
SWME A VEKL +GP+QPFYQVLVDV+ADP +LVAYVAEENLL +D+ + RF+HPY F
Sbjct: 239 SWMETANVEKLSKGPNQPFYQVLVDVYADPELLVAYVAEENLLEADESEKGRFEHPYTEF 298
Query: 297 LFYGTDTAGDFIPIKQLREKYNRPRYEVPTDPEDEE 332
LFYG D A DFIP+KQLREKY++PRYE D D++
Sbjct: 299 LFYGEDMARDFIPVKQLREKYDQPRYEASGDENDDD 334
>gi|148906096|gb|ABR16207.1| unknown [Picea sitchensis]
Length = 340
Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 194/291 (66%), Positives = 234/291 (80%), Gaps = 5/291 (1%)
Query: 36 RIGIDRPCFCHQFVQGLHLRVTFNLLRQR-NLRANAGWLFKGGSDRGLDASSERSESANE 94
RI ++R H+ LH + ++ QR LR A + KG +D + A SE SESANE
Sbjct: 37 RISLNRRH--HELSHALHFSLMSSVDSQRRGLRVIAAGMSKG-NDPTVTAISECSESANE 93
Query: 95 DILFFFFQLDLATRVQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRG-LSSKSEAQD 153
DIL FFFQLDL TR+QCALN ++Y+IAQQLR+KL EVE+E++RQ E+K G SSK EAQD
Sbjct: 94 DILLFFFQLDLTTRIQCALNSDQYEIAQQLRSKLAEVEQEVARQRESKMGSTSSKDEAQD 153
Query: 154 KALSIIRLRADLQKAIDSENYALAADLRDQICKLEAESLAASATALAFENARFAFRLGQK 213
KA++I+RLR DLQKAI+ E+YA AA+LR++I KLEA+SLAA+A ALA++NA +AFRLGQK
Sbjct: 154 KAIAILRLRTDLQKAIEDEDYAYAAELRNKISKLEADSLAAAAKALAYQNAEYAFRLGQK 213
Query: 214 VNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPNILVAYV 273
V H IFGYRAVICGMDP+CCESSSW+E A V+KL +G +QPFYQVLVDVHADP+ LVAYV
Sbjct: 214 VRHAIFGYRAVICGMDPLCCESSSWIENANVDKLSRGRNQPFYQVLVDVHADPSPLVAYV 273
Query: 274 AEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKYNRPRYEV 324
AEENLL D+PD+ RFDHPYI LFYG DTAGDFIPIKQLREKYNR R+EV
Sbjct: 274 AEENLLKLDEPDLDRFDHPYIFLLFYGMDTAGDFIPIKQLREKYNRQRHEV 324
>gi|297818002|ref|XP_002876884.1| hypothetical protein ARALYDRAFT_322643 [Arabidopsis lyrata subsp.
lyrata]
gi|297322722|gb|EFH53143.1| hypothetical protein ARALYDRAFT_322643 [Arabidopsis lyrata subsp.
lyrata]
Length = 220
Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 164/220 (74%), Positives = 190/220 (86%)
Query: 113 LNMEEYDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSE 172
+N+E+YDIAQQLR KLTEVEEE R E KRG S+KSEAQDK +SIIRLRADLQ AIDSE
Sbjct: 1 MNLEQYDIAQQLREKLTEVEEESIRLQEGKRGSSAKSEAQDKGISIIRLRADLQNAIDSE 60
Query: 173 NYALAADLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVC 232
+Y LAA LRD+I KLEAESLA SA ALAFENA +AFRLGQK+ HK FGYRAV+CGMDP+C
Sbjct: 61 DYGLAAKLRDEISKLEAESLAVSAKALAFENAEYAFRLGQKLRHKTFGYRAVVCGMDPIC 120
Query: 233 CESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPNILVAYVAEENLLASDQPDMARFDHP 292
CESSSWME A+VEKL +G +QPFYQVLVD P+++VAYVAE+NLLA ++PD RFDHP
Sbjct: 121 CESSSWMEAAEVEKLPRGSNQPFYQVLVDARTHPDLVVAYVAEDNLLAPEKPDKERFDHP 180
Query: 293 YISFLFYGTDTAGDFIPIKQLREKYNRPRYEVPTDPEDEE 332
YISFL+YG DTAGDFIP+KQLREKYNRPR+EVP D ++E+
Sbjct: 181 YISFLYYGADTAGDFIPVKQLREKYNRPRHEVPFDSQEED 220
>gi|334184123|ref|NP_001189504.1| uvrB/uvrC motif-containing protein [Arabidopsis thaliana]
gi|4335771|gb|AAD17448.1| unknown protein [Arabidopsis thaliana]
gi|330250602|gb|AEC05696.1| uvrB/uvrC motif-containing protein [Arabidopsis thaliana]
Length = 220
Score = 347 bits (891), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 165/220 (75%), Positives = 189/220 (85%)
Query: 113 LNMEEYDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSE 172
+N+E+YDIAQQLR KLTEVEEE R E KRG S+KSEAQDK +SIIRLRADLQ AIDSE
Sbjct: 1 MNLEQYDIAQQLREKLTEVEEESIRLQEGKRGSSAKSEAQDKGISIIRLRADLQNAIDSE 60
Query: 173 NYALAADLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVC 232
+Y LAA LRD+I KLEAESLA SA ALAFE A +AFRLGQK+ HK FGYRAV+CGMDP+C
Sbjct: 61 DYGLAAKLRDEISKLEAESLAVSAKALAFEKAEYAFRLGQKLRHKTFGYRAVVCGMDPIC 120
Query: 233 CESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPNILVAYVAEENLLASDQPDMARFDHP 292
ESSSWME A+VEKL +G +QPFYQVLVDV P++LVAYVAE+NLLA ++PD RFDHP
Sbjct: 121 SESSSWMEAAEVEKLPRGSNQPFYQVLVDVRTHPDLLVAYVAEDNLLAPEKPDKERFDHP 180
Query: 293 YISFLFYGTDTAGDFIPIKQLREKYNRPRYEVPTDPEDEE 332
YISFL+YG DTAGDFIP+KQLREKYNRPR+EVP D +DE+
Sbjct: 181 YISFLYYGADTAGDFIPVKQLREKYNRPRHEVPFDSQDED 220
>gi|357487407|ref|XP_003613991.1| F-box only protein [Medicago truncatula]
gi|355515326|gb|AES96949.1| F-box only protein [Medicago truncatula]
Length = 300
Score = 323 bits (827), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 177/275 (64%), Positives = 216/275 (78%), Gaps = 10/275 (3%)
Query: 1 MVQVLSLSTLTTSGNGGFYGSPALWRRHFKLLEKSRI--GIDRPCFCHQFVQGL-HLRVT 57
MVQ +SLSTL T G YGSP F+ ++S I + ++ V+ L +
Sbjct: 1 MVQGVSLSTLATCGKSRIYGSP------FEPFKQSHITSSTGKHLVWNKCVKSLVFIGYP 54
Query: 58 FNLLRQRNLRANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEE 117
F ++ + AGW+F+GG ++ LDAS E+SESANEDIL FFFQLDLATRVQCALNMEE
Sbjct: 55 FASRQRSGFKVEAGWMFRGG-EQELDASVEQSESANEDILMFFFQLDLATRVQCALNMEE 113
Query: 118 YDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALA 177
YDIA+QLRNKLTEVEEE+ +Q ++KRG+SSKSEAQDKALS+IRLR+DLQ AI++E+YALA
Sbjct: 114 YDIAKQLRNKLTEVEEEVIKQKQSKRGMSSKSEAQDKALSVIRLRSDLQSAIENEDYALA 173
Query: 178 ADLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSS 237
A LRD+I KLEAESLAASA ALA ENA++ FRLGQKV HK+FGYRA+I GMDPVC ESSS
Sbjct: 174 AKLRDEISKLEAESLAASAKALAHENAQYVFRLGQKVKHKMFGYRAIIVGMDPVCSESSS 233
Query: 238 WMEIAQVEKLQQGPSQPFYQVLVDVHADPNILVAY 272
WME AQV+KL +G +QPFYQVLVDV A+P++LVAY
Sbjct: 234 WMENAQVKKLSRGTAQPFYQVLVDVRAEPDLLVAY 268
>gi|449531615|ref|XP_004172781.1| PREDICTED: F-box only protein 21-like, partial [Cucumis sativus]
Length = 179
Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 140/178 (78%), Positives = 157/178 (88%), Gaps = 2/178 (1%)
Query: 157 SIIRLRADLQKAIDSENYALAADLRDQICKLEAESLAASATALAFENARFAFRLGQKVNH 216
+IIRLRADLQKA++SENYALAA LRD+I KLE +SLAASA LA+E+A ++FRLGQKV H
Sbjct: 1 NIIRLRADLQKAVESENYALAAQLRDEISKLETDSLAASAKVLAYESAEYSFRLGQKVRH 60
Query: 217 KIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPNILVAYVAEE 276
KIFGYR VICGMDPVCCESSSWMEIAQVEKL +G +QPFYQVLVDV DP++LVAYVAEE
Sbjct: 61 KIFGYRGVICGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEE 120
Query: 277 NLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKYNRPRYEVPTDPEDEELQ 334
NLLA ++PD RFDHPY SFLFYG D+AGDFIPIKQLREKYNRPRYEVP ED+E Q
Sbjct: 121 NLLAPEEPDTERFDHPYSSFLFYGVDSAGDFIPIKQLREKYNRPRYEVPF--EDDEQQ 176
>gi|302793464|ref|XP_002978497.1| hypothetical protein SELMODRAFT_56554 [Selaginella moellendorffii]
gi|300153846|gb|EFJ20483.1| hypothetical protein SELMODRAFT_56554 [Selaginella moellendorffii]
Length = 241
Score = 284 bits (726), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 137/243 (56%), Positives = 184/243 (75%), Gaps = 3/243 (1%)
Query: 82 LDASSERSESANEDILFFFFQLDLATRVQCALNMEEYDIAQQLRNKLTEVEEEISRQLEA 141
L E SES NE++L+F FQLDLATR+Q ALN + YD AQ +R K+++VE+E+S+ E
Sbjct: 1 LSPKDEYSESVNEELLYFLFQLDLATRLQRALNQDHYDAAQAIREKISQVEKEVSKLREK 60
Query: 142 KRG-LSSKSEAQDKALSIIRLRADLQKAIDSENYALAADLRDQICKLEAESLAASATALA 200
K G +S+K+EAQDK ++++R R++L +I+ E+Y A L+D+I KLE+ESLAAS ALA
Sbjct: 61 KAGAVSAKNEAQDKEIALLRFRSELSASIEREDYEGARQLKDKISKLESESLAASVRALA 120
Query: 201 FENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLV 260
++N ++AFRLGQKV HK+FGYR V+CGMDPVCCES W + A+V Q +QPFYQVLV
Sbjct: 121 YQNVKYAFRLGQKVRHKLFGYRGVVCGMDPVCCESEKWCDRARV--YDQRKNQPFYQVLV 178
Query: 261 DVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKYNRP 320
DV ++P AYVAE++L A +PDM DHPYI FLF+G D+AGD+IP KQLR+KY+
Sbjct: 179 DVESEPQQEAAYVAEDSLEAPAEPDMEALDHPYIYFLFFGMDSAGDYIPTKQLRQKYDVA 238
Query: 321 RYE 323
R+E
Sbjct: 239 RHE 241
>gi|168037572|ref|XP_001771277.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677366|gb|EDQ63837.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 217
Score = 260 bits (665), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 120/211 (56%), Positives = 162/211 (76%), Gaps = 1/211 (0%)
Query: 118 YDIAQQLRNKLTEVEEEISRQLEAKRGL-SSKSEAQDKALSIIRLRADLQKAIDSENYAL 176
Y+ AQ LR K+ EVE+E++RQ +AK G SSK+E QD ++I++L+A+LQ+ I E+YA
Sbjct: 2 YEAAQGLREKIAEVEQEMARQRKAKTGSDSSKNEVQDTGIAILQLKAELQRLIAEEDYAA 61
Query: 177 AADLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESS 236
A +R+++ LEAESLAA AL+++ F FRLGQKV H++ GYR V+CGMDPVCCES
Sbjct: 62 AGAIRNKLTALEAESLAAQVQALSYQQRSFQFRLGQKVRHRVIGYRGVVCGMDPVCCESD 121
Query: 237 SWMEIAQVEKLQQGPSQPFYQVLVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISF 296
W E A V++L +G +QPFYQVLVDV +P+++V YVAE+NL+A ++PD +FDHPY+ F
Sbjct: 122 QWAETAGVDELPRGRNQPFYQVLVDVREEPSVMVTYVAEDNLVAPEEPDFEQFDHPYVYF 181
Query: 297 LFYGTDTAGDFIPIKQLREKYNRPRYEVPTD 327
LFYG D AGDFI KQLREKY+ PR+E+P D
Sbjct: 182 LFYGMDGAGDFIACKQLREKYDAPRHELPYD 212
>gi|302773998|ref|XP_002970416.1| hypothetical protein SELMODRAFT_93877 [Selaginella moellendorffii]
gi|300161932|gb|EFJ28546.1| hypothetical protein SELMODRAFT_93877 [Selaginella moellendorffii]
Length = 215
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 162/216 (75%), Gaps = 3/216 (1%)
Query: 113 LNMEEYDIAQQLRNKLTEVEEEISRQLEAKRG-LSSKSEAQDKALSIIRLRADLQKAIDS 171
LN + YD AQ +R K+++VE+E+S+ E K G +S+K+EAQDK ++++R R++L +I+
Sbjct: 1 LNQDHYDAAQAIREKISQVEKEVSKLREKKAGAVSAKNEAQDKEIALLRFRSELAASIER 60
Query: 172 ENYALAADLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPV 231
E+Y A L+D+I KLE+ESLAAS ALA++N ++AFRLGQKV HK+FGYR VICGMDPV
Sbjct: 61 EDYEGARQLKDKISKLESESLAASVRALAYQNVKYAFRLGQKVRHKLFGYRGVICGMDPV 120
Query: 232 CCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPNILVAYVAEENLLASDQPDMARFDH 291
CCES W + A+V Q +QPFYQVLVDV ++P AYVAE++L A +PD+ DH
Sbjct: 121 CCESEKWCDRARV--YDQRKNQPFYQVLVDVESEPQQEAAYVAEDSLEAPAEPDLEALDH 178
Query: 292 PYISFLFYGTDTAGDFIPIKQLREKYNRPRYEVPTD 327
PYI FLF+G D+AGD+IP KQLR+KY+ R+E D
Sbjct: 179 PYIYFLFFGMDSAGDYIPTKQLRQKYDVARHEQTND 214
>gi|413952334|gb|AFW84983.1| hypothetical protein ZEAMMB73_938746 [Zea mays]
Length = 218
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 115/187 (61%), Positives = 138/187 (73%), Gaps = 12/187 (6%)
Query: 42 PCFCHQFVQGLHLRVTF--------NLLRQRN--LRANAGWLFKGGSDRGLDASSERSES 91
PC + QGLH + N R+ N ++ NA WLF GG R DA ERSES
Sbjct: 31 PCEVNAVSQGLHSLHWWCAHKPQMKNNGRRMNAAVKTNARWLF-GGDGRSNDARLERSES 89
Query: 92 ANEDILFFFFQLDLATRVQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEA 151
ANEDIL F+FQ+DL TR+Q ALN+E++D+A+QLR KLTE+E EI RQ EA+RG S K+EA
Sbjct: 90 ANEDILIFYFQMDLQTRIQYALNIEQFDVAKQLREKLTEIETEIIRQREARRG-SPKTEA 148
Query: 152 QDKALSIIRLRADLQKAIDSENYALAADLRDQICKLEAESLAASATALAFENARFAFRLG 211
QDKAL++IR+RADLQKAIDSENYALAA LRD I KLE ESLA SA ALA++N ++AFRLG
Sbjct: 149 QDKALNLIRVRADLQKAIDSENYALAAGLRDDIAKLEVESLAVSAKALAYQNVKYAFRLG 208
Query: 212 QKVNHKI 218
QKV H I
Sbjct: 209 QKVRHNI 215
>gi|226528204|ref|NP_001146614.1| uncharacterized protein LOC100280211 [Zea mays]
gi|219888031|gb|ACL54390.1| unknown [Zea mays]
Length = 218
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 137/187 (73%), Gaps = 12/187 (6%)
Query: 42 PCFCHQFVQGLHLRVTF--------NLLRQRN--LRANAGWLFKGGSDRGLDASSERSES 91
PC + QGLH + N R+ N ++ NA WLF GG R DA ERSES
Sbjct: 31 PCEVNAVSQGLHSLHWWCAHKPQMKNNGRRMNAAVKTNARWLF-GGDGRSNDARLERSES 89
Query: 92 ANEDILFFFFQLDLATRVQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEA 151
ANEDIL F+FQ+DL TR+Q ALN+E++D+A+QLR KLTE+E EI RQ EA+RG S K+EA
Sbjct: 90 ANEDILIFYFQMDLQTRIQYALNIEQFDVAKQLREKLTEIETEIIRQREARRG-SPKTEA 148
Query: 152 QDKALSIIRLRADLQKAIDSENYALAADLRDQICKLEAESLAASATALAFENARFAFRLG 211
QDKAL++IR+RADLQKAIDSENYA AA LRD I KLE ESLA SA ALA++N ++AFRLG
Sbjct: 149 QDKALNLIRVRADLQKAIDSENYASAAGLRDDIAKLEVESLAVSAKALAYQNVKYAFRLG 208
Query: 212 QKVNHKI 218
QKV H I
Sbjct: 209 QKVRHNI 215
>gi|224108922|ref|XP_002315016.1| predicted protein [Populus trichocarpa]
gi|222864056|gb|EEF01187.1| predicted protein [Populus trichocarpa]
Length = 116
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 90/114 (78%), Positives = 101/114 (88%)
Query: 219 FGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPNILVAYVAEENL 278
GY+AV+CGMDP+CCESSSWME AQVEKL +G SQPFYQVLVDVH DPN+LVAYV EENL
Sbjct: 3 LGYQAVVCGMDPICCESSSWMETAQVEKLARGSSQPFYQVLVDVHEDPNLLVAYVPEENL 62
Query: 279 LASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKYNRPRYEVPTDPEDEE 332
+A ++PDM RFDHPY SFLFYG D AGDFIPIKQLREKYNRPR+EVP DP D++
Sbjct: 63 VAPEKPDMGRFDHPYTSFLFYGMDAAGDFIPIKQLREKYNRPRHEVPMDPPDDD 116
>gi|22136040|gb|AAM91602.1| unknown protein [Arabidopsis thaliana]
gi|23197744|gb|AAN15399.1| unknown protein [Arabidopsis thaliana]
Length = 138
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 85/114 (74%), Positives = 100/114 (87%)
Query: 219 FGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPNILVAYVAEENL 278
GYRAV+CGMDP+C ESSSWME A+VEKL +G +QPFYQVLVDV P++LVAYVAE+NL
Sbjct: 25 LGYRAVVCGMDPICSESSSWMEAAEVEKLPRGSNQPFYQVLVDVRTHPDLLVAYVAEDNL 84
Query: 279 LASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKYNRPRYEVPTDPEDEE 332
LA ++PD RFDHPYISFL+YG DTAGDFIP+KQLREKYNRPR+EVP D +DE+
Sbjct: 85 LAPEKPDKERFDHPYISFLYYGADTAGDFIPVKQLREKYNRPRHEVPFDSQDED 138
>gi|388516453|gb|AFK46288.1| unknown [Medicago truncatula]
Length = 120
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 85/115 (73%), Positives = 100/115 (86%)
Query: 218 IFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPNILVAYVAEEN 277
+FGYRA+I GMDPVC ESSSWME AQV+KL +G +QPFYQVLVDV A+P++LVAYVAEEN
Sbjct: 1 MFGYRAIIVGMDPVCSESSSWMENAQVKKLSRGTAQPFYQVLVDVCAEPDLLVAYVAEEN 60
Query: 278 LLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKYNRPRYEVPTDPEDEE 332
LL D+ D RFDHPY+SFLFYG D+AGDFIPIKQLREKYN+PR+E+P DP +E
Sbjct: 61 LLVPDKADKGRFDHPYMSFLFYGMDSAGDFIPIKQLREKYNKPRHEIPFDPPTDE 115
>gi|159483241|ref|XP_001699669.1| hypothetical protein CHLREDRAFT_141656 [Chlamydomonas reinhardtii]
gi|158281611|gb|EDP07365.1| predicted protein [Chlamydomonas reinhardtii]
Length = 293
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 151/273 (55%), Gaps = 24/273 (8%)
Query: 75 KGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEYDIAQQLRNKLTE-VEE 133
+GG+ ERS+ NE++++F FQLDL T++Q LN E Y+ AQ++R K ++E
Sbjct: 9 EGGATVRPVGERERSQLVNEEVVYFIFQLDLDTQLQRCLNYEAYEAAQEVRKKRQRSMKE 68
Query: 134 EISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAADLRDQICKLEAESLA 193
+R A + + A D A ++RLR ++Q+A+++E+Y AA RD + +LE E+
Sbjct: 69 RKARNTGAPVAVQRLAGA-DYAAELLRLRTEMQRAVEAEDYGSAAKYRDLLKELETEAKK 127
Query: 194 ASATALAFENARF---AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQG 250
A+A A ++ RLGQ+V HK GYR V+ G D CCES W+ A+V + +G
Sbjct: 128 AAALAAEWDTTSPNGPVLRLGQRVLHKQLGYRGVVVGWDMRCCESEEWIAAARVGECGRG 187
Query: 251 PSQPFYQVLVDV---HADPNI-LVAYVAEENLLASDQPDMAR---------------FDH 291
QPFY +LVD DP++ VAYV EE L + + A H
Sbjct: 188 IGQPFYHLLVDARDWEYDPHLPPVAYVPEELLTSPELEPPAEGAKPKSWAEVYGTDPLQH 247
Query: 292 PYISFLFYGTDTAGDFIPIKQLREKYNRPRYEV 324
PY+ LF G D GD++P +QLR++YN R +V
Sbjct: 248 PYLYILFLGLDGRGDYVPCRQLRDRYNVQRRDV 280
>gi|449534064|ref|XP_004173989.1| PREDICTED: uncharacterized protein LOC101228319, partial [Cucumis
sativus]
Length = 163
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/164 (51%), Positives = 110/164 (67%), Gaps = 3/164 (1%)
Query: 1 MVQVLSLSTLTTSGNGGFYGSPALWRRHFKLLEKSRIG--IDRPCFCHQFVQGLHLRVTF 58
MVQ LS+ +T G+ YGS WRR+FK +++ + R CF HQ ++ L
Sbjct: 1 MVQDLSIHAMTALGDPNVYGSALSWRRNFKYFKQTSLTQLTSRQCFWHQCMRSFSLTSQP 60
Query: 59 NLLRQRNLRANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEY 118
++ + + AGWLFKGG ERSE+AN DIL FFFQLDLATRVQ ALN+E+Y
Sbjct: 61 RRSKRGSFKIRAGWLFKGGGQES-GGRIERSENANNDILIFFFQLDLATRVQYALNIEQY 119
Query: 119 DIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLR 162
+IAQ+LR KLTEVE E+ +Q E+K+GL+SKSE QDK L+IIRLR
Sbjct: 120 EIAQELRMKLTEVEAEVIKQQESKKGLTSKSEVQDKGLNIIRLR 163
>gi|302843425|ref|XP_002953254.1| hypothetical protein VOLCADRAFT_94016 [Volvox carteri f.
nagariensis]
gi|300261351|gb|EFJ45564.1| hypothetical protein VOLCADRAFT_94016 [Volvox carteri f.
nagariensis]
Length = 381
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 95/249 (38%), Positives = 133/249 (53%), Gaps = 38/249 (15%)
Query: 102 QLDLATRVQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAKR------GLSSKSEAQDKA 155
QLDL T++Q LN E Y+ AQ++R K V+E + + E K S+K A D A
Sbjct: 15 QLDLDTQLQRCLNYEAYEAAQEVRKKRQRVDEAVQQMRERKARNTGMPAASTKLGAADFA 74
Query: 156 LSIIRLRADLQKAIDSENYALAADLRDQICKLEAESLAASATALAFENARFA-----FRL 210
+RLR+++Q+A+++ENYA AA RD + +LE + A+A A ++ + RL
Sbjct: 75 TEGLRLRSEMQRAVEAENYADAAKYRDLLRELETQVKKAAALAAEWDTTTSSSGGPKLRL 134
Query: 211 GQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLV-------DVH 263
GQ+V H+ GYR V+ G D CCES W+ ++ E LQ G Q FY +LV D H
Sbjct: 135 GQRVLHRQLGYRGVVVGWDSQCCESEDWIAQSKAESLQGGTRQVFYHLLVDARDWEYDAH 194
Query: 264 ADPNILVAYVAEENLLASDQPDMAR--------------FDHPYISFLFYGTDTAGDFIP 309
P VAYVAEE L P+M HPY+ LF G D GD++P
Sbjct: 195 LPP---VAYVAEELLT---WPEMESEGGKSWVEVYGNDPLQHPYLYILFLGLDGRGDYVP 248
Query: 310 IKQLREKYN 318
+QLR+KY+
Sbjct: 249 CRQLRDKYS 257
>gi|224108918|ref|XP_002315015.1| predicted protein [Populus trichocarpa]
gi|222864055|gb|EEF01186.1| predicted protein [Populus trichocarpa]
Length = 91
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/91 (76%), Positives = 81/91 (89%)
Query: 130 EVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAADLRDQICKLEA 189
+VE E+ RQ EAKRG SSKSEAQDKA+SIIRLRADLQ AI++ENYA+AA+LRDQI +LEA
Sbjct: 1 KVEGEVIRQQEAKRGSSSKSEAQDKAISIIRLRADLQNAIENENYAVAAELRDQISELEA 60
Query: 190 ESLAASATALAFENARFAFRLGQKVNHKIFG 220
ESLAASA AL +ENA++AFRLGQKV HK FG
Sbjct: 61 ESLAASAKALVYENAQYAFRLGQKVKHKTFG 91
>gi|384245506|gb|EIE19000.1| hypothetical protein COCSUDRAFT_54839 [Coccomyxa subellipsoidea
C-169]
Length = 253
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/254 (36%), Positives = 129/254 (50%), Gaps = 30/254 (11%)
Query: 94 EDILFFFFQLDLATRVQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQD 153
++++ F FQ + T++Q ALN E+YD A +R + V+E I E + S+
Sbjct: 14 QELVLFIFQQEFDTQLQRALNYEDYDQANDIRQRRQTVDEAI----EKLQVFPSQD---- 65
Query: 154 KALSIIRLRADLQKAIDSENYALAADLRDQICKLEAESLAAS---ATALAFENARFAFRL 210
++LR LQ+AI+ + Y AA LRD I L+ + A+ + ++ + R +L
Sbjct: 66 -----VQLRVQLQRAIEEQRYDDAAALRDTIGALQQKMRDAALQRSNSMQAQQPR-RLKL 119
Query: 211 GQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP---- 266
GQ+V H GYRAV+ G D CCE W A LQ G QPFY +LVDV P
Sbjct: 120 GQRVEHATSGYRAVVYGWDDGCCEDDDWKAAADFNNLQFGDLQPFYHLLVDVRDWPLNSS 179
Query: 267 NILVAYVAEENLLASDQPDMAR-------FDHPYISFLFYGTDTAGDFIPIKQLREKYNR 319
VAYV +E LLA P FDHP + LF G D GD IP + LR+K+ +
Sbjct: 180 TPPVAYVPQERLLAPQWPSTWESEKGADLFDHPMKTVLFLGEDDNGDLIPTRALRDKHGQ 239
Query: 320 PRYEVPTDPEDEEL 333
R ++ P DE L
Sbjct: 240 ARQDIF--PPDENL 251
>gi|297720435|ref|NP_001172579.1| Os01g0764500 [Oryza sativa Japonica Group]
gi|255673711|dbj|BAH91309.1| Os01g0764500, partial [Oryza sativa Japonica Group]
Length = 73
Score = 120 bits (301), Expect = 9e-25, Method: Composition-based stats.
Identities = 52/69 (75%), Positives = 58/69 (84%)
Query: 190 ESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQ 249
ESLA SA ALA++N +AFRLGQKV HK+ GYRAVICGMDPVCCES SWME A VE L +
Sbjct: 2 ESLAVSAKALAYQNVEYAFRLGQKVRHKVHGYRAVICGMDPVCCESKSWMETANVENLSK 61
Query: 250 GPSQPFYQV 258
GP+QPFYQV
Sbjct: 62 GPNQPFYQV 70
>gi|255638073|gb|ACU19351.1| unknown [Glycine max]
Length = 103
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/73 (73%), Positives = 60/73 (82%), Gaps = 2/73 (2%)
Query: 60 LLRQRNLRANAGWLFKGGSDRGLDASSERSESANEDIL-FFFFQLDLATRVQCALNMEEY 118
L R RA A W+F+GG ++GLD SSE SESANEDIL FFFFQLDLATRVQ ALNME+Y
Sbjct: 31 LTRHSGFRAEAAWMFRGG-EQGLDVSSEHSESANEDILMFFFFQLDLATRVQYALNMEQY 89
Query: 119 DIAQQLRNKLTEV 131
DIA+QLRNKL EV
Sbjct: 90 DIAKQLRNKLAEV 102
>gi|357487405|ref|XP_003613990.1| hypothetical protein MTR_5g043470 [Medicago truncatula]
gi|355515325|gb|AES96948.1| hypothetical protein MTR_5g043470 [Medicago truncatula]
Length = 72
Score = 102 bits (255), Expect = 2e-19, Method: Composition-based stats.
Identities = 44/60 (73%), Positives = 51/60 (85%)
Query: 273 VAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKYNRPRYEVPTDPEDEE 332
VAEENLL D+ D RFDHPY+SFLFYG D+AGDFIPIKQLREKYN+PR+E+P DP +E
Sbjct: 8 VAEENLLVPDKADKGRFDHPYMSFLFYGMDSAGDFIPIKQLREKYNKPRHEIPFDPPTDE 67
>gi|223974865|gb|ACN31620.1| unknown [Zea mays]
Length = 152
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 72/111 (64%), Gaps = 11/111 (9%)
Query: 35 SRIGIDRPCFCHQFVQGLHLRVTF--------NLLRQRN--LRANAGWLFKGGSDRGLDA 84
+R + PC + QGLH + N R+ N ++ NA WLF GG R DA
Sbjct: 24 ARNDVRLPCEVNAVSQGLHSLHWWCAHKPQMKNNGRRMNAAVKTNARWLF-GGDGRSNDA 82
Query: 85 SSERSESANEDILFFFFQLDLATRVQCALNMEEYDIAQQLRNKLTEVEEEI 135
ERSESANEDIL F+FQ+DL TR+Q ALN+E++D+A+QLR KLTE+E+++
Sbjct: 83 RLERSESANEDILIFYFQMDLQTRIQYALNIEQFDVAKQLREKLTEIEQKL 133
>gi|4335759|gb|AAD17436.1| unknown protein [Arabidopsis thaliana]
gi|45773924|gb|AAS76766.1| At2g03400 [Arabidopsis thaliana]
Length = 131
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 67/111 (60%), Gaps = 4/111 (3%)
Query: 1 MVQVLSLSTLTTSGNGGFYGSPALWRRHFKLLEKSRIGIDRPCFCHQFVQGLHLRVTFNL 60
MVQ SLSTLT G+ +L R ++ S + DR C + R +
Sbjct: 1 MVQSQSLSTLTICGS---VKVSSLLRNRLNSVKASSLIGDRCVSCQFLRKSPSFRSHWKS 57
Query: 61 LRQRNL-RANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQ 110
L+QRNL R A W F+GG ++GLD SSERSESANEDIL FFFQLDLATRVQ
Sbjct: 58 LKQRNLLRVEARWPFQGGGEQGLDPSSERSESANEDILIFFFQLDLATRVQ 108
>gi|195613214|gb|ACG28437.1| hypothetical protein [Zea mays]
Length = 148
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 67/105 (63%), Gaps = 10/105 (9%)
Query: 35 SRIGIDRPCFCHQFVQGLH-LRVTFNLLRQRN--------LRANAGWLFKGGSDRGLDAS 85
+R + PC + QGLH L + + +N ++ NA WLF GG R DA
Sbjct: 24 ARNDVRLPCEVNAVSQGLHSLHWCAHKPQMKNNGRRMNAAVKTNARWLF-GGDGRSNDAR 82
Query: 86 SERSESANEDILFFFFQLDLATRVQCALNMEEYDIAQQLRNKLTE 130
ERSESANEDIL F+FQ+DL TR+Q ALN+E++D+A+QLR KLTE
Sbjct: 83 LERSESANEDILIFYFQMDLQTRIQYALNIEQFDVAKQLREKLTE 127
>gi|413952335|gb|AFW84984.1| hypothetical protein ZEAMMB73_938746 [Zea mays]
Length = 149
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 67/106 (63%), Gaps = 11/106 (10%)
Query: 35 SRIGIDRPCFCHQFVQGLHLRVTF--------NLLRQRN--LRANAGWLFKGGSDRGLDA 84
+R + PC + QGLH + N R+ N ++ NA WLF GG R DA
Sbjct: 24 ARNDVRLPCEVNAVSQGLHSLHWWCAHKPQMKNNGRRMNAAVKTNARWLF-GGDGRSNDA 82
Query: 85 SSERSESANEDILFFFFQLDLATRVQCALNMEEYDIAQQLRNKLTE 130
ERSESANEDIL F+FQ+DL TR+Q ALN+E++D+A+QLR KLTE
Sbjct: 83 RLERSESANEDILIFYFQMDLQTRIQYALNIEQFDVAKQLREKLTE 128
>gi|307109179|gb|EFN57417.1| hypothetical protein CHLNCDRAFT_18065, partial [Chlorella
variabilis]
Length = 104
Score = 77.4 bits (189), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Query: 216 HKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPNILVAYVAE 275
H + YR VI G DP+CC W ++ +V+ L G +QPFY+VLVD P YVA+
Sbjct: 4 HARYNYRGVIVGYDPICCAPDEWCQMMRVDSLPLGRNQPFYEVLVDERDRPGAQSCYVAQ 63
Query: 276 ENLLASDQPDMARFDHPYISFLFYG-TDTAGDFIPIKQLREKY 317
EN++ P R HP + F + G ++P LR Y
Sbjct: 64 ENVMPMRAPREVR--HPLVPHFFSAFSPEEGGYVPSPLLRAAY 104
>gi|384249751|gb|EIE23232.1| hypothetical protein COCSUDRAFT_63588 [Coccomyxa subellipsoidea
C-169]
Length = 714
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDV 262
N +R+G+ + H+ +GYR VI G DP C W+ V+ L G QPFY VLVD+
Sbjct: 282 NGSVLYRVGEIMEHRRYGYRGVIFGWDPTCTAGDEWIAQMNVDALPGGRHQPFYHVLVDI 341
Query: 263 HADPNILVAYVAEENLLASDQPDMARFDHP 292
+ PN YVA+EN+ MAR P
Sbjct: 342 GSRPN-QSTYVAQENIERFADMPMARMGSP 370
>gi|428168745|gb|EKX37686.1| hypothetical protein GUITHDRAFT_165416 [Guillardia theta CCMP2712]
Length = 479
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 23/172 (13%)
Query: 108 RVQCALNMEEYDIAQQLRNKL-------------TEVEEEISRQL-EAKRGLSSKSEAQD 153
+++ A+N EE++ A L+ +L T ++EEI + +AK A +
Sbjct: 188 KMKNAVNAEEFEKADALKKELVGHEIKKMYHSLYTRIKEEIKKDYGKAKEIFDRMITADE 247
Query: 154 KALSIIRLRADLQKAIDSENYALAADLRDQICKLEAESLAA---SATALAFENARFAFRL 210
K RL + +A +S + +DLR ++ +L S++ + ++F RF R+
Sbjct: 248 KK----RLEVQIARAAESNRWKSVSDLRARLVRLYVNSISRPILTTLGVSFRPPRF--RI 301
Query: 211 GQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDV 262
G V HK GYR V+ G D C + W++ ++++L +G +Q FY +L D
Sbjct: 302 GDTVKHKGLGYRGVVIGWDDKCLATEYWIKHYKIDQLSKGRTQRFYHILPDT 353
>gi|380030133|ref|XP_003698710.1| PREDICTED: F-box only protein 21-like [Apis florea]
Length = 627
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 64/126 (50%), Gaps = 18/126 (14%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+ +G + HKI+GY VI G D C S+ WM V+ L++G QPFY++ VD +
Sbjct: 502 YAIGLIMKHKIYGYLCVITGWDVRCMASTEWMNEMNVDGLEEGADQPFYKIFVDDGS--- 558
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKYNRPRYEVPTD 327
Y A+ENLL + P+ +H I FY + +IP ++ ++Y
Sbjct: 559 --CQYAAQENLLLAPNPEW--INHHAIGRYFYKF-SGAHYIPNEEKAKEY---------- 603
Query: 328 PEDEEL 333
PEDE++
Sbjct: 604 PEDEKV 609
>gi|328778823|ref|XP_396942.4| PREDICTED: f-box only protein 21-like [Apis mellifera]
Length = 627
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 64/126 (50%), Gaps = 18/126 (14%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+ +G + HKI+GY VI G D C S+ WM V+ L++G QPFY++ VD +
Sbjct: 502 YAIGLIMKHKIYGYLCVITGWDVRCMASTEWMNEMNVDGLEEGADQPFYKIFVDDGS--- 558
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKYNRPRYEVPTD 327
Y A+ENLL + P+ +H I FY + +IP ++ ++Y
Sbjct: 559 --CQYAAQENLLLAPNPEW--INHHAIGRYFYKF-SGAHYIPNEEKAKEY---------- 603
Query: 328 PEDEEL 333
PEDE++
Sbjct: 604 PEDEKV 609
>gi|94496207|ref|ZP_01302785.1| Hemimethylated DNA-binding region protein [Sphingomonas sp. SKA58]
gi|94424386|gb|EAT09409.1| Hemimethylated DNA-binding region protein [Sphingomonas sp. SKA58]
Length = 123
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 68/125 (54%), Gaps = 12/125 (9%)
Query: 185 CKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQV 244
K ++ A TA +ARF+ +G V H++FG+R V+ +DPV S W E A
Sbjct: 1 MKEMSQIFGAGMTAPPIVHARFS--IGDVVKHRMFGFRGVVFDIDPVFANSEEWYE-AIP 57
Query: 245 EKLQQGPSQPFYQVLVDVHADPNILVAYVAEENLLA--SDQPDMARFDHPYISFLFYGTD 302
E + QPFY +L + + D + VAYV+++NL+ SD+P DHP IS +F GT
Sbjct: 58 EAARPDKHQPFYHLLAE-NGDSS-YVAYVSQQNLVTDDSDEP----VDHPAISGMF-GTY 110
Query: 303 TAGDF 307
G +
Sbjct: 111 AKGKY 115
>gi|381200581|ref|ZP_09907718.1| hypothetical protein SyanX_08818 [Sphingobium yanoikuyae XLDN2-5]
gi|427410116|ref|ZP_18900318.1| hemimethylated DNA binding domain-containing protein [Sphingobium
yanoikuyae ATCC 51230]
gi|425712249|gb|EKU75264.1| hemimethylated DNA binding domain-containing protein [Sphingobium
yanoikuyae ATCC 51230]
Length = 123
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 70/134 (52%), Gaps = 14/134 (10%)
Query: 185 CKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQV 244
K+ +++ TA +ARF+ +G + H+ FG+R V+ +DPV S W E +
Sbjct: 1 MKVTIQNIGTGITAPPVVHARFS--IGDVLKHRSFGFRGVVFDIDPVFANSEEWYE-SIP 57
Query: 245 EKLQQGPSQPFYQVLVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTA 304
E + QPFY +L + N VAYV+++NL+A D + DHP I+ LF
Sbjct: 58 EHARPDKQQPFYHLLAE--NGENSYVAYVSQQNLVADDSEEPV--DHPAITGLF------ 107
Query: 305 GDFIPIK-QLREKY 317
GD+ K QLR ++
Sbjct: 108 GDYADGKYQLRPRH 121
>gi|87200491|ref|YP_497748.1| hemimethylated DNA-binding region protein [Novosphingobium
aromaticivorans DSM 12444]
gi|87136172|gb|ABD26914.1| Hemimethylated DNA-binding region protein [Novosphingobium
aromaticivorans DSM 12444]
Length = 126
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 7/104 (6%)
Query: 197 TALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFY 256
+A +ARF+ +G V H++FG+R VI +DPV S W E + E ++ QPFY
Sbjct: 16 SAPPVSSARFS--IGDVVRHRMFGFRGVIFDIDPVFANSEEWYE-SIPEDMRPPRDQPFY 72
Query: 257 QVLVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYG 300
+L + D N VAYV+++NLLA + DHP + +F G
Sbjct: 73 HLLAE--NDENSYVAYVSQQNLLADAE--AGPVDHPSLDEMFEG 112
>gi|350402750|ref|XP_003486590.1| PREDICTED: F-box only protein 21-like [Bombus impatiens]
Length = 627
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 60/131 (45%), Gaps = 20/131 (15%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDV 262
N ++A +G + HKI GY VI G D C ++ WM V L GP QPFY + VD
Sbjct: 499 NVKYA--IGLIMKHKIHGYMCVITGWDTYCTATTEWMNEMNVGGLVDGPGQPFYNIFVDD 556
Query: 263 HADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKYNRPRY 322
+ YVA+ENL + P H I FY A +IP ++ +Y
Sbjct: 557 GS-----CHYVAQENLELASNP--GWIHHHAIGRYFYKFSGA-HYIPNEEKAREY----- 603
Query: 323 EVPTDPEDEEL 333
PEDE++
Sbjct: 604 -----PEDEKI 609
>gi|340711833|ref|XP_003394473.1| PREDICTED: f-box only protein 21-like [Bombus terrestris]
Length = 627
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 18/126 (14%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+ +G + HKI GY VI G D C ++ WM V L GP QPFY + VD +
Sbjct: 502 YAIGLIMKHKIHGYMCVITGWDTYCTATTEWMNEMNVGGLVDGPGQPFYNIFVDDGS--- 558
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKYNRPRYEVPTD 327
YVA+ENL + P H I FY A +IP ++ +Y
Sbjct: 559 --CHYVAQENLELASNP--GWIHHHAIGRYFYKFSGA-HYIPNEEKAREY---------- 603
Query: 328 PEDEEL 333
PEDE++
Sbjct: 604 PEDEKI 609
>gi|443711607|gb|ELU05313.1| hypothetical protein CAPTEDRAFT_212049 [Capitella teleta]
Length = 226
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 55/134 (41%), Gaps = 13/134 (9%)
Query: 190 ESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQ 249
E AS +R+GQ + HK +GYR +I G DP SW++
Sbjct: 100 EYFGASKEPRYPRPPHVKYRVGQVIKHKKWGYRGIIVGWDPYTKAPESWIKEMHPADKPH 159
Query: 250 GPSQPFYQVLVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIP 309
+P Y VLVD P YVAEEN+ + HP I FY D A ++P
Sbjct: 160 WRKKPSYSVLVDTRDRPEPQATYVAEENIEVVTN---TKVIHPAIDDYFYKYDGA-QYLP 215
Query: 310 IKQLREKYNRPRYE 323
RP+Y+
Sbjct: 216 ---------RPKYK 220
>gi|224101425|ref|XP_002312274.1| predicted protein [Populus trichocarpa]
gi|222852094|gb|EEE89641.1| predicted protein [Populus trichocarpa]
Length = 50
Score = 64.3 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/34 (82%), Positives = 29/34 (85%)
Query: 288 RFDHPYISFLFYGTDTAGDFIPIKQLREKYNRPR 321
RFDHP SFLFYG +T GDFI IKQLREKYNRPR
Sbjct: 15 RFDHPCTSFLFYGMETPGDFILIKQLREKYNRPR 48
>gi|399069126|ref|ZP_10749297.1| hemimethylated DNA binding domain containing protein [Caulobacter
sp. AP07]
gi|398045278|gb|EJL38017.1| hemimethylated DNA binding domain containing protein [Caulobacter
sp. AP07]
Length = 109
Score = 64.3 bits (155), Expect = 8e-08, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 6/101 (5%)
Query: 203 NARFA-FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
N+RFA F +GQ V H+IF +R V+ +DPV + W + E ++ QPFY +L +
Sbjct: 2 NSRFAKFAIGQVVKHRIFPFRGVVFDVDPVFANTEEWWN-SIPEDIRPTKDQPFYHLLAE 60
Query: 262 VHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTD 302
D N VAYV+E+NLLA + + HP + +F D
Sbjct: 61 --NDDNTYVAYVSEQNLLADETGEPV--GHPQTAVIFESFD 97
>gi|294010682|ref|YP_003544142.1| hypothetical protein SJA_C1-06960 [Sphingobium japonicum UT26S]
gi|390169323|ref|ZP_10221263.1| hypothetical protein SIDU_17573 [Sphingobium indicum B90A]
gi|292674012|dbj|BAI95530.1| conserved hypothetical protein [Sphingobium japonicum UT26S]
gi|389588076|gb|EIM66131.1| hypothetical protein SIDU_17573 [Sphingobium indicum B90A]
Length = 123
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 66/123 (53%), Gaps = 12/123 (9%)
Query: 192 LAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGP 251
TA +ARF+ LG V H++FG+R V+ +DPV + W + A E+++
Sbjct: 8 FGPDVTAPPIVHARFS--LGDVVQHRLFGFRGVVFDIDPVFANTEEWYQ-AIPEEVRPDK 64
Query: 252 SQPFYQVLVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIK 311
QPFY +L + + VAYV+++NL+A D + DHP IS +F GT G +
Sbjct: 65 HQPFYHLLAE--NGESSYVAYVSQQNLVADDSEEPV--DHPAISGMF-GTYANGKY---- 115
Query: 312 QLR 314
QLR
Sbjct: 116 QLR 118
>gi|307103624|gb|EFN51882.1| hypothetical protein CHLNCDRAFT_59044 [Chlorella variabilis]
Length = 285
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 50/94 (53%), Gaps = 12/94 (12%)
Query: 243 QVEKLQQGPSQPFYQVLVDVHADP----NILVAYVAEENLLA-------SDQPDM-ARFD 290
Q+ +L G Q FY VLVD P VAYVAEE L A SDQP + F+
Sbjct: 141 QMHELAHGADQLFYHVLVDARDWPLDGDTPPVAYVAEECLTAGSSADFSSDQPLVDGSFE 200
Query: 291 HPYISFLFYGTDTAGDFIPIKQLREKYNRPRYEV 324
HPY LF G D G+ +P +QLR+KY R +V
Sbjct: 201 HPYSYLLFLGADGQGNMVPARQLRDKYCVGRRDV 234
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 85 SSERSESANEDILFFFFQLDLATRVQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRG 144
++ERS N++++ F FQL++ +++Q AL E +D+AQ++R + +V+ + R+L+ +G
Sbjct: 70 TAERSMLINKEVVLFLFQLEMDSQLQRALTYERFDMAQEVRGRREQVDAAL-RELQQLKG 128
>gi|307108514|gb|EFN56754.1| hypothetical protein CHLNCDRAFT_144212 [Chlorella variabilis]
Length = 351
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+F +GQ + H+ + YR VI G DP C S W++ V++L G QPFY VL D P
Sbjct: 233 SFVVGQVIRHRRYQYRGVIIGWDPECRASEEWVQQMGVDRLPGGRRQPFYHVLPDPEDRP 292
Query: 267 NILVAYVAEENL 278
YVA+EN+
Sbjct: 293 GQAQTYVAQENV 304
>gi|383647913|ref|ZP_09958319.1| hemimethylated DNA binding protein [Sphingomonas elodea ATCC 31461]
Length = 126
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 8/109 (7%)
Query: 191 SLAASATAL-AFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQ 249
++A+S T + + +ARFA +G V H++ +R VI +DPV + W + V+ +Q
Sbjct: 9 TIASSGTPMPSIASARFA--IGDVVRHRLLDFRGVIFDVDPVFANTDEWYDSIPVD-MQP 65
Query: 250 GPSQPFYQVLVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLF 298
QPFY +L + D + +AYV+++NL+A D + HP IS LF
Sbjct: 66 AKDQPFYHLLAE--NDDSTYIAYVSQQNLVADDSDEPVY--HPGISGLF 110
>gi|390604575|gb|EIN13966.1| YccV-like-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 527
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDV 262
N + +G H + Y VI G DPVC ES WM +V++L +G QPFYQ LV
Sbjct: 384 NTTIKYFVGAMFRHNKYEYDGVIVGWDPVCAESEQWMNQMKVDELNRGRRQPFYQALVT- 442
Query: 263 HADPNILVAYVAEENL 278
N YVAEEN+
Sbjct: 443 ----NGPSRYVAEENI 454
>gi|326433202|gb|EGD78772.1| hemimethylated DNA binding domain-containing protein [Salpingoeca
sp. ATCC 50818]
Length = 216
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 68/165 (41%), Gaps = 12/165 (7%)
Query: 165 LQKAIDSENYALAADLRDQI-------CKLEAESLAASATALAFENARFAFRLGQKVNHK 217
LQ+ + + A+ R Q +++ + A + + FR+GQ + HK
Sbjct: 53 LQQPTEQHTSSTASTSRQQTEPPTTHNTRIDRQEYYAGSKMPRRDRTGVKFRVGQVIRHK 112
Query: 218 IFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVH-ADPNILVAYVAEE 276
+GYR +I G D W E V K + S PFY VLVD P YV +
Sbjct: 113 RYGYRGIIIGWDTFAKAPDGWFEKMGVNKEHR--SDPFYSVLVDTRDRGPRPQTTYVWQG 170
Query: 277 NL-LASDQPDMARFDHPYISFLFYGTDTA-GDFIPIKQLREKYNR 319
N+ + D A HP F+ + G ++P LR +Y R
Sbjct: 171 NIDVDVTDSDKASISHPEKGRYFHVYERRYGAYVPRDWLRRRYPR 215
>gi|196010988|ref|XP_002115358.1| hypothetical protein TRIADDRAFT_59194 [Trichoplax adhaerens]
gi|190582129|gb|EDV22203.1| hypothetical protein TRIADDRAFT_59194 [Trichoplax adhaerens]
Length = 531
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 67/116 (57%), Gaps = 8/116 (6%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
E + F++G + HK + ++ ++CG D VC + +W+ + +L QG +QPFY VL
Sbjct: 415 EYPQVKFKIGDILLHKRYNFQCIVCGWDSVCDKGEAWILQNGINQLSQGKNQPFYNVL-- 472
Query: 262 VHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
AD + YVA+ENL +D+ ++ + HP + ++ + ++ + P +Q+ ++Y
Sbjct: 473 -GADSS--ERYVAQENLETTDRTELIQ--HPELG-RYFNSFSSKIYEPNEQMHKRY 522
>gi|220936087|ref|YP_002514986.1| hemimethylated DNA-binding region [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219997397|gb|ACL73999.1| hemimethylated DNA-binding region [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 103
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +GQ ++H++FGYR V+ +DPV + W AQV + Q +P+Y VLVD A
Sbjct: 6 FSIGQIIHHRLFGYRGVVVDVDPVFQGTEEWY--AQVAQSQPPRDEPWYHVLVDGEA--- 60
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYG 300
+ YVA++NL D + +HPY F G
Sbjct: 61 -VETYVAQQNLEPGDASE--PIEHPYTEAFFTG 90
>gi|398384777|ref|ZP_10542805.1| hemimethylated DNA binding domain-containing protein [Sphingobium
sp. AP49]
gi|397722057|gb|EJK82602.1| hemimethylated DNA binding domain-containing protein [Sphingobium
sp. AP49]
Length = 123
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 69/134 (51%), Gaps = 14/134 (10%)
Query: 185 CKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQV 244
K+ +++ A + +ARF+ +G + H+ FG+R V+ +DPV S W E +
Sbjct: 1 MKVTIQNIGTGIAAPSIVHARFS--IGDVLKHRSFGFRGVVFDIDPVFANSDEWYE-SIP 57
Query: 245 EKLQQGPSQPFYQVLVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTA 304
E + QPFY +L + N VAYV+++NL+A D + DHP I LF
Sbjct: 58 EHARPDKEQPFYHLLAE--NGENSYVAYVSQQNLVADDSEEPV--DHPAIIGLF------ 107
Query: 305 GDFIPIK-QLREKY 317
GD+ K QLR ++
Sbjct: 108 GDYADGKYQLRPRH 121
>gi|118098856|ref|XP_425297.2| PREDICTED: F-box only protein 21 [Gallus gallus]
Length = 610
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 58/132 (43%), Gaps = 18/132 (13%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
++ F +G + HK +GY VI G DP C W+ V L GP QPFY VLV+
Sbjct: 469 KHKEVCFSIGLIMKHKRYGYNCVIYGWDPACMMGHEWIRNMNVHSLPHGPHQPFYNVLVE 528
Query: 262 VHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKYNRPR 321
+ Y A+ENL + +P HP I ++ T ++ +L +Y
Sbjct: 529 DGS-----CRYAAQENLEHNSEP--REIPHPDIG-RYFSEFTGTHYLANTELEIRY---- 576
Query: 322 YEVPTDPEDEEL 333
PED EL
Sbjct: 577 ------PEDLEL 582
>gi|347527964|ref|YP_004834711.1| putative DNA-binding protein [Sphingobium sp. SYK-6]
gi|345136645|dbj|BAK66254.1| putative DNA-binding protein [Sphingobium sp. SYK-6]
Length = 136
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
FR+G V H++FG+R V+ +DPV S W E V + QPFY + D +
Sbjct: 35 FRIGDTVRHRMFGFRGVVFDIDPVFANSEEWYEAIPV-AARPPRDQPFYHLFAD--NGES 91
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLF 298
VAYV+++NL+A + D DHP I LF
Sbjct: 92 SYVAYVSQQNLVADETGDP--IDHPAIDALF 120
>gi|326387957|ref|ZP_08209562.1| hemimethylated DNA-binding region protein [Novosphingobium
nitrogenifigens DSM 19370]
gi|326207548|gb|EGD58360.1| hemimethylated DNA-binding region protein [Novosphingobium
nitrogenifigens DSM 19370]
Length = 126
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Query: 197 TALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFY 256
TA ARFA +G V HK+F +R VI +DPV + W E + E ++ QPFY
Sbjct: 16 TAPDISVARFA--IGDVVRHKLFDFRGVIFDIDPVFANTEEWYE-SIPEDIRPPRDQPFY 72
Query: 257 QVLVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYG 300
+L + D N VAYV+++NL +D + DHP ++ +F G
Sbjct: 73 HLLAE--NDENNYVAYVSQQNL--ADDAESGPVDHPSLTEMFEG 112
>gi|393721414|ref|ZP_10341341.1| hypothetical protein SechA1_16783 [Sphingomonas echinoides ATCC
14820]
Length = 126
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 60/107 (56%), Gaps = 11/107 (10%)
Query: 194 ASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQ 253
++ T +ARFA +G V H++F +R V+ +DP+ S W + A EKL+ Q
Sbjct: 13 STITLPPIAHARFA--IGDVVRHRMFDFRGVVFDIDPIFANSDEWYD-AIPEKLRPRKDQ 69
Query: 254 PFYQVLVDVHADPNILVAYVAEENLLA--SDQPDMARFDHPYISFLF 298
PFY +L + + VAYV+++NL+ SD+P DHP IS LF
Sbjct: 70 PFYHLLAENME--SSYVAYVSQQNLVPDDSDEP----VDHPAISGLF 110
>gi|260821103|ref|XP_002605873.1| hypothetical protein BRAFLDRAFT_90800 [Branchiostoma floridae]
gi|229291209|gb|EEN61883.1| hypothetical protein BRAFLDRAFT_90800 [Branchiostoma floridae]
Length = 521
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 59/133 (44%), Gaps = 18/133 (13%)
Query: 201 FENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLV 260
F + +G + H+ + Y VI G DP C S WM V L GP+QPF+ VLV
Sbjct: 396 FNTEGVIYSVGMIMRHRRYSYNCVIYGWDPQCEMSEEWMIQMGVHSLSMGPNQPFFNVLV 455
Query: 261 DVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKYNRP 320
++ Y A ENL P HP I ++ T ++P +L+++Y
Sbjct: 456 ADGSN-----RYAARENLEHHQHP--CEITHPEIG-RYFQQFTGNYYVPNDELKKRY--- 504
Query: 321 RYEVPTDPEDEEL 333
P+DEE+
Sbjct: 505 -------PQDEEM 510
>gi|449265788|gb|EMC76926.1| F-box only protein 21 [Columba livia]
Length = 545
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 54/127 (42%), Gaps = 18/127 (14%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +G + HK +GY VI G DP C W+ V L GP QPFY VLV+ +
Sbjct: 423 CFSIGLIMKHKRYGYNCVIYGWDPACMMGHEWIRNMNVHSLTHGPHQPFYNVLVEDGS-- 480
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKYNRPRYEVPT 326
Y A+ENL + +P HP I F +F I L RY
Sbjct: 481 ---CRYAAQENLEYNSEP--REIPHPDIGRYF------SEFTGIHYLANTELEIRY---- 525
Query: 327 DPEDEEL 333
PED +L
Sbjct: 526 -PEDMDL 531
>gi|295689973|ref|YP_003593666.1| hemimethylated DNA binding protein [Caulobacter segnis ATCC 21756]
gi|295431876|gb|ADG11048.1| hemimethylated DNA binding protein [Caulobacter segnis ATCC 21756]
Length = 109
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 6/101 (5%)
Query: 203 NARFA-FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
N+R A F +GQ V H+IF +R V+ +DPV + W E + E+++ QPFY +L +
Sbjct: 2 NSRLAKFAIGQVVRHRIFPFRGVVFDVDPVFANTEEWWE-SIPEEIRPTKDQPFYHLLAE 60
Query: 262 VHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTD 302
+ N VAYV+E+NLL D + HP + +F D
Sbjct: 61 --NEDNSYVAYVSEQNLLPDDSGEPV--GHPQTAVIFESFD 97
>gi|47221488|emb|CAG08150.1| unnamed protein product [Tetraodon nigroviridis]
Length = 427
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 97/259 (37%), Gaps = 31/259 (11%)
Query: 60 LLRQRNLRANAGWLFKGGSDRGLDASSERSESANEDILFFFFQLDLATRVQCALNMEEYD 119
LRQ+N+ + K +R + S +EDI F + Q EY
Sbjct: 146 FLRQQNILRS----LKSFLERPAEQQSALEGVTSEDIFDFVYIDAFGKGKQLTAKECEYL 201
Query: 120 IAQQLRNKL---TEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSEN--- 173
I Q+ E + R + + + E +K+ ++R DL I+ +N
Sbjct: 202 IGHQVTADYYSAISTNELLLRMVGNLLNIGKRGEGNEKSYQLLRDSLDLYLTINPDNVQY 261
Query: 174 --------YALAADLRDQICKLE----AESLAASATAL--AFENARFAFRLGQKVNHKIF 219
+ L R LE + AA L + E+A + +G + HK
Sbjct: 262 LLLQARLYFHLGIMARKVQHTLEHIQHKKHPAAPEVKLRSSPEHAEVQYSVGLIMKHKRS 321
Query: 220 GYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPNILVAYVAEENLL 279
GY VI G DP C + W+ +V L GP QPFY VLV + Y A+ENL
Sbjct: 322 GYNCVIYGWDPKCTMNQEWITTMRVNLLPNGPQQPFYNVLVQ-----DGTCRYAAQENLE 376
Query: 280 ASDQPDMARFDHPYISFLF 298
P HP + F
Sbjct: 377 PHSAP--MEIGHPEVGRYF 393
>gi|334346085|ref|YP_004554637.1| hemimethylated DNA binding protein [Sphingobium chlorophenolicum
L-1]
gi|334102707|gb|AEG50131.1| hemimethylated DNA binding protein [Sphingobium chlorophenolicum
L-1]
Length = 123
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 12/123 (9%)
Query: 192 LAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGP 251
TA +ARF+ +G V H+ FG+R VI +DPV + W + A E+++
Sbjct: 8 FGQDVTAPPIVHARFS--IGDVVQHRRFGFRGVIFDIDPVFANTEEWYQ-AIPEEVRPHK 64
Query: 252 SQPFYQVLVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIK 311
QPFY +L + + VAYV+++NL+A D + DHP IS +F GT G +
Sbjct: 65 EQPFYHLLAE--NGESSYVAYVSQQNLVADDSEEPV--DHPAISDMF-GTYANGKY---- 115
Query: 312 QLR 314
QLR
Sbjct: 116 QLR 118
>gi|83643114|ref|YP_431549.1| hypothetical protein HCH_00208 [Hahella chejuensis KCTC 2396]
gi|83631157|gb|ABC27124.1| uncharacterized conserved protein [Hahella chejuensis KCTC 2396]
Length = 103
Score = 61.6 bits (148), Expect = 5e-07, Method: Composition-based stats.
Identities = 40/104 (38%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 204 ARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVH 263
A+ F +GQ V H +FGYR V+ G+DP+ + +W E V K + QP+Y VL VH
Sbjct: 2 AQAHFFVGQLVEHNLFGYRGVVIGVDPMFNHTDAWYE--SVAKSRPPKDQPWYHVL--VH 57
Query: 264 ADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDF 307
++ YVAE NL S D + DHP + F D A F
Sbjct: 58 ESDHM--TYVAERNLRVS--LDTTQIDHPLLGAYFDRYDGARYF 97
>gi|449477492|ref|XP_002196975.2| PREDICTED: F-box only protein 21 [Taeniopygia guttata]
Length = 556
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 56/132 (42%), Gaps = 18/132 (13%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
++ F +G + HK +GY VI G DP C W+ V L GP QPFY VLV+
Sbjct: 429 KHKEVCFSIGLIMKHKRYGYNCVIYGWDPACMMGHEWIRNMNVHSLPHGPHQPFYNVLVE 488
Query: 262 VHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKYNRPR 321
+ Y A+ENL + +P HP I F +F + L R
Sbjct: 489 DGS-----CRYAAQENLEYNSEP--REIPHPDIGRYF------SEFTGVHYLANTELEIR 535
Query: 322 YEVPTDPEDEEL 333
Y PED EL
Sbjct: 536 Y-----PEDLEL 542
>gi|187607970|ref|NP_001120516.1| F-box protein 21 [Xenopus (Silurana) tropicalis]
gi|170284790|gb|AAI61417.1| LOC100145649 protein [Xenopus (Silurana) tropicalis]
gi|170284792|gb|AAI61423.1| LOC100145649 protein [Xenopus (Silurana) tropicalis]
Length = 617
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 84/179 (46%), Gaps = 21/179 (11%)
Query: 153 DKALSIIRLRADLQKAIDSENYALAADLRDQICKLEA--ESLAASATALAFENARFAFRL 210
+K L I++ ++Q S++ A+A ++ + +E E A + EN + ++ +
Sbjct: 438 EKVLDILQ---NIQALDPSQHGAVAYLVQHTLVHIEKRKEENALDCKLRSNEN-QVSYSI 493
Query: 211 GQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPNILV 270
G V HK + Y VI G DP C W++ + L QG Q FY VL++ +
Sbjct: 494 GLVVRHKRYDYSGVIFGWDPFCMMPPDWIDNMDIHSLSQGADQAFYNVLLEDGS-----C 548
Query: 271 AYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKYNRPRYEVPTDPE 329
+YVA+ENL P R HP I L++ T +I + L+ +Y P DPE
Sbjct: 549 SYVAQENLEPHPSPKEIR--HPEIG-LYFSEFTGTYYIANENLQLQY-------PEDPE 597
>gi|405976334|gb|EKC40846.1| F-box only protein 21 [Crassostrea gigas]
Length = 224
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 62/149 (41%), Gaps = 11/149 (7%)
Query: 173 NYALAADLRDQICKLEAESL-------AASATALAFENARFAFRLGQKVNHKIFGYRAVI 225
+YA DL + LE AS + +R+GQ + HKI+GYR VI
Sbjct: 74 SYAGQDDLNGESPALEVMKFKDPEGYFGASTEPRSPRPPEVRYRVGQVIRHKIWGYRGVI 133
Query: 226 CGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPNILVAYVAEENLLASDQPD 285
DP W+E + Q +QP Y +LVD + YV +EN+ D
Sbjct: 134 VAWDPQARAPEGWVEQNHRKDKPQWRTQPNYAILVDTRDRMTPQLTYVPQENI---DIIS 190
Query: 286 MARFDHPYISFLFYGTDTAGDFIPIKQLR 314
+ HP I F G D A +IP L+
Sbjct: 191 NVKIMHPGIENYFEGFDGA-QYIPRPWLK 218
>gi|167646172|ref|YP_001683835.1| hemimethylated DNA-binding protein [Caulobacter sp. K31]
gi|167348602|gb|ABZ71337.1| hemimethylated DNA binding protein [Caulobacter sp. K31]
Length = 109
Score = 61.2 bits (147), Expect = 7e-07, Method: Composition-based stats.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 203 NARFA-FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
N+R A F +GQ V H+IF +R V+ +DPV + W + E ++ QPFY +L +
Sbjct: 2 NSRTAKFAIGQVVKHRIFPFRGVVFDVDPVFANTEEWWN-SIPEDIRPTKDQPFYHLLAE 60
Query: 262 VHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTD 302
D N VAYV+E+NLLA + + HP + +F D
Sbjct: 61 --NDDNTYVAYVSEQNLLADETGEPV--GHPQTAVIFESFD 97
>gi|163760196|ref|ZP_02167279.1| hypothetical protein HPDFL43_08039 [Hoeflea phototrophica DFL-43]
gi|162282595|gb|EDQ32883.1| hypothetical protein HPDFL43_08039 [Hoeflea phototrophica DFL-43]
Length = 109
Score = 61.2 bits (147), Expect = 7e-07, Method: Composition-based stats.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +GQ V H+IF +R VI +DPV + W A E ++ QPFY +L + D
Sbjct: 8 FTIGQVVKHRIFPFRGVIFDVDPVYANTEEWWN-AIPENVRPRKDQPFYHLLAE--NDDT 64
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQL 313
VAYV+E+NLL D + R HP ++ F+ T G ++P +++
Sbjct: 65 EYVAYVSEQNLLIDDSENPIR--HPQLA-EFFETQIDGVYMPKERI 107
>gi|327306473|ref|XP_003237928.1| F-box protein [Trichophyton rubrum CBS 118892]
gi|326460926|gb|EGD86379.1| F-box protein [Trichophyton rubrum CBS 118892]
Length = 595
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDV 262
N +++GQ HK + Y +I G DP C WME V++L G Q FY VLV+
Sbjct: 482 NGNVKYKVGQLFRHKRYEYIGLITGWDPECGAGEQWMERMGVDRLHAGRHQSFYHVLVED 541
Query: 263 HADPNILVAYVAEEN-----LLASDQPD 285
+ V YVAEEN L AS+ PD
Sbjct: 542 KS-----VRYVAEENIEICELEASEVPD 564
>gi|326470477|gb|EGD94486.1| F-box protein [Trichophyton tonsurans CBS 112818]
gi|326478661|gb|EGE02671.1| F-box domain-containing protein [Trichophyton equinum CBS 127.97]
Length = 595
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDV 262
N +++GQ HK + Y +I G DP C WME V++L G Q FY VLV+
Sbjct: 482 NGNVKYKVGQLFRHKRYEYIGLITGWDPECGAGEQWMERMGVDRLHAGRHQSFYHVLVED 541
Query: 263 HADPNILVAYVAEEN-----LLASDQPD 285
+ V YVAEEN L AS+ PD
Sbjct: 542 KS-----VRYVAEENIEICELEASEVPD 564
>gi|315047616|ref|XP_003173183.1| F-box domain-containing protein [Arthroderma gypseum CBS 118893]
gi|311343569|gb|EFR02772.1| F-box domain-containing protein [Arthroderma gypseum CBS 118893]
Length = 595
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDV 262
N +++GQ HK + Y +I G DP C WME V++L G Q FY VLV+
Sbjct: 482 NGNVKYKVGQLFRHKRYEYIGLITGWDPECGAGEQWMERMGVDRLHAGRHQSFYHVLVED 541
Query: 263 HADPNILVAYVAEEN-----LLASDQPD 285
+ V YVAEEN L AS+ PD
Sbjct: 542 KS-----VRYVAEENIEICELEASEVPD 564
>gi|302498555|ref|XP_003011275.1| hypothetical protein ARB_02557 [Arthroderma benhamiae CBS 112371]
gi|302657356|ref|XP_003020402.1| hypothetical protein TRV_05520 [Trichophyton verrucosum HKI 0517]
gi|291174824|gb|EFE30635.1| hypothetical protein ARB_02557 [Arthroderma benhamiae CBS 112371]
gi|291184232|gb|EFE39784.1| hypothetical protein TRV_05520 [Trichophyton verrucosum HKI 0517]
Length = 595
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDV 262
N +++GQ HK + Y +I G DP C WME V++L G Q FY VLV+
Sbjct: 482 NGNVKYKVGQLFRHKRYEYIGLITGWDPECGAGEQWMERMGVDRLHAGRHQSFYHVLVED 541
Query: 263 HADPNILVAYVAEEN-----LLASDQPD 285
+ V YVAEEN L AS+ PD
Sbjct: 542 KS-----VRYVAEENIEICELEASEVPD 564
>gi|85716366|ref|ZP_01047339.1| hemimethylated DNA-binding region protein [Nitrobacter sp. Nb-311A]
gi|85696882|gb|EAQ34767.1| hemimethylated DNA-binding region protein [Nitrobacter sp. Nb-311A]
Length = 110
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 60/103 (58%), Gaps = 6/103 (5%)
Query: 204 ARFA-FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDV 262
AR A F++GQ V+H+IF +R VI +DPV + W ++ E ++ QPFY +L +
Sbjct: 4 ARIAKFQIGQIVSHRIFSFRGVIFDIDPVFNNTEEWW-LSIPENIRPHKDQPFYHLLAE- 61
Query: 263 HADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAG 305
AD VAYV+E+NLL+ D + R H ++ +F ++ G
Sbjct: 62 SADSE-YVAYVSEQNLLSDDSGEPIR--HSQVTKIFVQDESGG 101
>gi|85710506|ref|ZP_01041570.1| hypothetical protein NAP1_08852 [Erythrobacter sp. NAP1]
gi|85687684|gb|EAQ27689.1| hypothetical protein NAP1_08852 [Erythrobacter sp. NAP1]
Length = 126
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 5/108 (4%)
Query: 191 SLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQG 250
S A T A ++R F +G+ V H++F +R V+ +DPV S W E + E+++
Sbjct: 8 SSQAGRTINAPRSSRSRFGIGELVRHRLFDFRGVVFDIDPVFANSEEWYE-SIPEEIRPP 66
Query: 251 PSQPFYQVLVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLF 298
QPFY +L + + + VAYV++ NL+A P DHP + LF
Sbjct: 67 RDQPFYHLLAE--NEESSYVAYVSQGNLVA--DPSGGPIDHPTVPQLF 110
>gi|193786667|dbj|BAG51990.1| unnamed protein product [Homo sapiens]
Length = 371
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 56/126 (44%), Gaps = 18/126 (14%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 246 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS--- 302
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKYNRPRYEVPTD 327
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 303 --CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY---------- 347
Query: 328 PEDEEL 333
PED EL
Sbjct: 348 PEDLEL 353
>gi|296804864|ref|XP_002843280.1| F-box domain-containing protein [Arthroderma otae CBS 113480]
gi|238845882|gb|EEQ35544.1| F-box domain-containing protein [Arthroderma otae CBS 113480]
Length = 580
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDV 262
N +++GQ HK + Y ++ G DP C WME V++L G Q FY VLV+
Sbjct: 467 NGNVKYKVGQLFRHKRYEYIGLVTGWDPECGAGEQWMERMGVDRLHAGRHQSFYHVLVED 526
Query: 263 HADPNILVAYVAEEN-----LLASDQPD 285
+ V YVAEEN L AS+ PD
Sbjct: 527 KS-----VRYVAEENIEVCELEASEIPD 549
>gi|351694761|gb|EHA97679.1| Nitric oxide synthase, brain [Heterocephalus glaber]
Length = 1802
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 1677 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS--- 1733
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 1734 --CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 1778
>gi|417403538|gb|JAA48569.1| Putative f-box only protein 21 [Desmodus rotundus]
Length = 637
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 512 CYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 569
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 570 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELELRY 614
>gi|332187077|ref|ZP_08388817.1| hemimethylated DNA binding domain protein [Sphingomonas sp. S17]
gi|332012777|gb|EGI54842.1| hemimethylated DNA binding domain protein [Sphingomonas sp. S17]
Length = 112
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 60/100 (60%), Gaps = 11/100 (11%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDV 262
+ARFA +G V H++F R VI +DPV S W + A E+++ QPFY +L +
Sbjct: 8 SARFA--IGDVVRHRMFDIRGVIFDVDPVFANSDEWYD-AIPEQIRPAKDQPFYHLLAE- 63
Query: 263 HADPNILVAYVAEENLLA--SDQPDMARFDHPYISFLFYG 300
+A+ + VAYV+++NLL SD+P DHP ++ LF G
Sbjct: 64 NAESS-YVAYVSQQNLLPDDSDEP----VDHPALAGLFTG 98
>gi|330907499|ref|XP_003295833.1| hypothetical protein PTT_03336 [Pyrenophora teres f. teres 0-1]
gi|311332510|gb|EFQ96070.1| hypothetical protein PTT_03336 [Pyrenophora teres f. teres 0-1]
Length = 512
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 205 RFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHA 264
+ +FR+GQ HK + Y AVI G D VC S W+ +V+ L G +Q FY VLV
Sbjct: 402 KVSFRVGQLFRHKRYNYEAVITGWDVVCDMSEDWIRATRVDNLPDGRNQAFYHVLV---C 458
Query: 265 DPNILVAYVAEENLLASDQ 283
D +I YVA EN+ D+
Sbjct: 459 DKSI--RYVAAENIQPVDR 475
>gi|16125860|ref|NP_420424.1| hypothetical protein CC_1613 [Caulobacter crescentus CB15]
gi|221234622|ref|YP_002517058.1| hemimethylated DNA-binding protein yccV [Caulobacter crescentus
NA1000]
gi|13423012|gb|AAK23592.1| conserved hypothetical protein [Caulobacter crescentus CB15]
gi|220963794|gb|ACL95150.1| hemimethylated DNA-binding protein yccV [Caulobacter crescentus
NA1000]
Length = 109
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 203 NARFA-FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
N+R A F +GQ V H+IF +R V+ +DPV + W + + E ++ QPFY +L +
Sbjct: 2 NSRLAKFAIGQVVRHRIFPFRGVVFDVDPVFANTEEWWQ-SIPEDIRPTKDQPFYHLLAE 60
Query: 262 VHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTD 302
+ N VAYV+E+NLL D + HP + +F D
Sbjct: 61 --NEDNSYVAYVSEQNLLPDDSGE--PIGHPQTAVIFESFD 97
>gi|417403459|gb|JAA48533.1| Putative f-box only protein 21 [Desmodus rotundus]
Length = 628
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 503 CYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 560
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 561 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELELRY 605
>gi|26006223|dbj|BAC41454.1| mKIAA0875 protein [Mus musculus]
Length = 625
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 500 CYSIGLVMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 557
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 558 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 602
>gi|335057501|ref|NP_001101808.2| F-box only protein 21 [Rattus norvegicus]
Length = 620
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 495 CYSIGLVMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 552
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 553 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 597
>gi|149063492|gb|EDM13815.1| F-box only protein 21 (predicted) [Rattus norvegicus]
Length = 632
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 507 CYSIGLVMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 564
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 565 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 609
>gi|26339162|dbj|BAC33252.1| unnamed protein product [Mus musculus]
gi|26339396|dbj|BAC33369.1| unnamed protein product [Mus musculus]
Length = 620
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 495 CYSIGLVMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 552
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 553 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 597
>gi|395833958|ref|XP_003789984.1| PREDICTED: F-box only protein 21 isoform 1 [Otolemur garnettii]
Length = 621
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 495 CYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 552
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 553 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 597
>gi|148687854|gb|EDL19801.1| F-box only protein 21, isoform CRA_a [Mus musculus]
Length = 637
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 512 CYSIGLVMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 569
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 570 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 614
>gi|21704134|ref|NP_663539.1| F-box only protein 21 [Mus musculus]
gi|51316047|sp|Q8VDH1.1|FBX21_MOUSE RecName: Full=F-box only protein 21
gi|18256900|gb|AAH21871.1| F-box protein 21 [Mus musculus]
gi|26340462|dbj|BAC33894.1| unnamed protein product [Mus musculus]
Length = 627
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 502 CYSIGLVMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 559
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 560 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 604
>gi|148687855|gb|EDL19802.1| F-box only protein 21, isoform CRA_b [Mus musculus]
Length = 620
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 495 CYSIGLVMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 552
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 553 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 597
>gi|395833960|ref|XP_003789985.1| PREDICTED: F-box only protein 21 isoform 2 [Otolemur garnettii]
Length = 628
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 502 CYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 559
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 560 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 604
>gi|345790904|ref|XP_543416.3| PREDICTED: F-box only protein 21 isoform 2 [Canis lupus familiaris]
Length = 620
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 495 CYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 552
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 553 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 597
>gi|431914239|gb|ELK15497.1| F-box only protein 21 [Pteropus alecto]
Length = 536
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 411 CYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 468
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 469 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELELRY 513
>gi|60688267|gb|AAH91496.1| FBXO21 protein, partial [Homo sapiens]
Length = 620
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 494 CYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 551
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 552 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 596
>gi|344295245|ref|XP_003419324.1| PREDICTED: F-box only protein 21 isoform 2 [Loxodonta africana]
Length = 620
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 495 CYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 552
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 553 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 597
>gi|432116790|gb|ELK37415.1| F-box only protein 21 [Myotis davidii]
Length = 578
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 454 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS--- 510
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 511 --CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELELRY 555
>gi|60390171|sp|Q5R5S1.1|FBX21_PONAB RecName: Full=F-box only protein 21
gi|55732388|emb|CAH92895.1| hypothetical protein [Pongo abelii]
Length = 621
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 495 CYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 552
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 553 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 597
>gi|301770735|ref|XP_002920785.1| PREDICTED: f-box only protein 21-like [Ailuropoda melanoleuca]
Length = 565
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 441 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS--- 497
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 498 --CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 542
>gi|291407086|ref|XP_002719851.1| PREDICTED: F-box only protein 21 isoform 1 [Oryctolagus cuniculus]
Length = 621
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 495 CYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 552
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 553 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 597
>gi|402887803|ref|XP_003907270.1| PREDICTED: F-box only protein 21 [Papio anubis]
Length = 621
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 495 CYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 552
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 553 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 597
>gi|344295243|ref|XP_003419323.1| PREDICTED: F-box only protein 21 isoform 1 [Loxodonta africana]
Length = 627
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 502 CYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 559
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 560 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 604
>gi|354466988|ref|XP_003495953.1| PREDICTED: F-box only protein 21 [Cricetulus griseus]
gi|344237032|gb|EGV93135.1| F-box only protein 21 [Cricetulus griseus]
Length = 627
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 502 CYSIGLVMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 559
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 560 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 604
>gi|291407088|ref|XP_002719852.1| PREDICTED: F-box only protein 21 isoform 2 [Oryctolagus cuniculus]
Length = 628
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 502 CYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 559
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 560 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 604
>gi|345790906|ref|XP_003433428.1| PREDICTED: F-box only protein 21 isoform 1 [Canis lupus familiaris]
Length = 627
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 502 CYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 559
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 560 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 604
>gi|299756203|ref|XP_001829165.2| hypothetical protein CC1G_01845 [Coprinopsis cinerea okayama7#130]
gi|298411570|gb|EAU92800.2| hypothetical protein CC1G_01845 [Coprinopsis cinerea okayama7#130]
Length = 626
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 16/174 (9%)
Query: 158 IIRLRADLQKAIDSENYALAADLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHK 217
+I R L K D A I + E++ A A ++R + +G +NH
Sbjct: 425 LILYRNLLPKLNDEHQAAFNEHCVKAIQQEESKIAALDAPKRRASSSRPKYFVGMAMNHL 484
Query: 218 IFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPNILVA--YVAE 275
+ YR VI G P C W+E V+ L G SQPFY V +P L+ YVAE
Sbjct: 485 KYNYRGVIFGWTPKCEAPEEWIENMDVDSLAGGRSQPFYHVFSVNELNPRSLLNTYYVAE 544
Query: 276 EN------------LLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
EN +L + PD+ R+ + F G + G F+P ++ +Y
Sbjct: 545 ENIKPRSLDAELGEILLNHIPDLPRY-FGKVEFP-RGKEGFGRFVPSPEMSLEY 596
>gi|16306502|ref|NP_296373.1| F-box only protein 21 isoform 1 [Homo sapiens]
gi|114647180|ref|XP_001155956.1| PREDICTED: F-box only protein 21 isoform 6 [Pan troglodytes]
gi|395744917|ref|XP_003778181.1| PREDICTED: F-box only protein 21 [Pongo abelii]
gi|426374292|ref|XP_004054010.1| PREDICTED: F-box only protein 21 isoform 2 [Gorilla gorilla
gorilla]
gi|218512038|sp|O94952.2|FBX21_HUMAN RecName: Full=F-box only protein 21
gi|119618508|gb|EAW98102.1| F-box protein 21, isoform CRA_a [Homo sapiens]
gi|119618510|gb|EAW98104.1| F-box protein 21, isoform CRA_a [Homo sapiens]
gi|410227128|gb|JAA10783.1| F-box protein 21 [Pan troglodytes]
gi|410249124|gb|JAA12529.1| F-box protein 21 [Pan troglodytes]
gi|410298840|gb|JAA28020.1| F-box protein 21 [Pan troglodytes]
gi|410334517|gb|JAA36205.1| F-box protein 21 [Pan troglodytes]
Length = 628
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 502 CYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 559
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 560 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 604
>gi|380810786|gb|AFE77268.1| F-box only protein 21 isoform 2 [Macaca mulatta]
Length = 621
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 495 CYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 552
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 553 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 597
>gi|347300233|ref|NP_001231426.1| F-box only protein 21 [Sus scrofa]
Length = 627
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 502 CYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 559
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 560 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 604
>gi|16306500|ref|NP_055817.1| F-box only protein 21 isoform 2 [Homo sapiens]
gi|114647178|ref|XP_001156074.1| PREDICTED: F-box only protein 21 isoform 8 [Pan troglodytes]
gi|297693122|ref|XP_002823873.1| PREDICTED: F-box only protein 21 isoform 2 [Pongo abelii]
gi|426374290|ref|XP_004054009.1| PREDICTED: F-box only protein 21 isoform 1 [Gorilla gorilla
gorilla]
gi|6164745|gb|AAF04522.1|AF174601_1 F-box protein Fbx21 [Homo sapiens]
gi|4240239|dbj|BAA74898.1| KIAA0875 protein [Homo sapiens]
gi|119618511|gb|EAW98105.1| F-box protein 21, isoform CRA_c [Homo sapiens]
gi|119618512|gb|EAW98106.1| F-box protein 21, isoform CRA_c [Homo sapiens]
gi|168269512|dbj|BAG09883.1| F-box only protein 21 [synthetic construct]
gi|193786072|dbj|BAG50962.1| unnamed protein product [Homo sapiens]
gi|410227126|gb|JAA10782.1| F-box protein 21 [Pan troglodytes]
gi|410249122|gb|JAA12528.1| F-box protein 21 [Pan troglodytes]
gi|410298838|gb|JAA28019.1| F-box protein 21 [Pan troglodytes]
gi|410334515|gb|JAA36204.1| F-box protein 21 [Pan troglodytes]
Length = 621
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 495 CYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 552
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 553 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 597
>gi|332250698|ref|XP_003274489.1| PREDICTED: F-box only protein 21 isoform 1 [Nomascus leucogenys]
Length = 621
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 495 CYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 552
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 553 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 597
>gi|109098894|ref|XP_001083109.1| PREDICTED: f-box only protein 21 isoform 5 [Macaca mulatta]
Length = 621
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 495 CYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 552
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 553 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 597
>gi|355688311|gb|AER98463.1| F-box protein 21 [Mustela putorius furo]
Length = 562
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 441 CYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 498
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 499 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 543
>gi|410976704|ref|XP_003994753.1| PREDICTED: F-box only protein 21 [Felis catus]
Length = 476
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 351 CYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 408
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 409 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 453
>gi|380810784|gb|AFE77267.1| F-box only protein 21 isoform 1 [Macaca mulatta]
Length = 628
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 502 CYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 559
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 560 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 604
>gi|444723214|gb|ELW63875.1| F-box only protein 21, partial [Tupaia chinensis]
Length = 542
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 416 CYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 473
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 474 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 518
>gi|390468258|ref|XP_002753105.2| PREDICTED: LOW QUALITY PROTEIN: F-box only protein 21 [Callithrix
jacchus]
Length = 647
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 522 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS--- 578
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 579 --CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 623
>gi|426247750|ref|XP_004017639.1| PREDICTED: F-box only protein 21 [Ovis aries]
Length = 549
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 424 CYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 481
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 482 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 526
>gi|281343739|gb|EFB19323.1| hypothetical protein PANDA_009569 [Ailuropoda melanoleuca]
Length = 548
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 423 CYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 480
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 481 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 525
>gi|71051436|gb|AAH34045.1| FBXO21 protein [Homo sapiens]
Length = 537
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 411 CYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 468
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 469 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 513
>gi|27503437|gb|AAH42333.1| FBXO21 protein [Homo sapiens]
gi|119618509|gb|EAW98103.1| F-box protein 21, isoform CRA_b [Homo sapiens]
Length = 477
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 351 CYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 408
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 409 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 453
>gi|432872855|ref|XP_004072158.1| PREDICTED: F-box only protein 21-like [Oryzias latipes]
Length = 648
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 200 AFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVL 259
A E+ F +G + HK GY VI G DP C S W+ +V +L G +QPFY VL
Sbjct: 492 APEHLEVQFSVGLIMKHKRSGYNCVIYGWDPKCTMSQEWITTMRVHQLSSGANQPFYNVL 551
Query: 260 VDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLF 298
V + Y A+ENL P HP + F
Sbjct: 552 VQ-----DGTCRYAAQENLEPHSSP--LEIGHPEVGRYF 583
>gi|378731949|gb|EHY58408.1| F-box protein 21 [Exophiala dermatitidis NIH/UT8656]
Length = 604
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 210 LGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPNIL 269
+GQ H+ GY AVI G DP C W+ + QV++L G QPFY VLV+ +
Sbjct: 495 VGQIFRHRRRGYLAVIYGWDPYCRMQEQWIHMNQVDRLPNGRHQPFYNVLVEDES----- 549
Query: 270 VAYVAEENLL 279
YVAEEN++
Sbjct: 550 TRYVAEENIV 559
>gi|355786571|gb|EHH66754.1| hypothetical protein EGM_03804, partial [Macaca fascicularis]
Length = 549
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 423 CYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 480
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 481 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 525
>gi|338727760|ref|XP_001489475.3| PREDICTED: LOW QUALITY PROTEIN: f-box only protein 21, partial
[Equus caballus]
Length = 531
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 406 CYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 463
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 464 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 508
>gi|403281572|ref|XP_003932256.1| PREDICTED: F-box only protein 21 [Saimiri boliviensis boliviensis]
Length = 537
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 411 CYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 468
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 469 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 513
>gi|355564721|gb|EHH21221.1| hypothetical protein EGK_04235 [Macaca mulatta]
Length = 567
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 442 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS--- 498
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 499 --CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 543
>gi|103486585|ref|YP_616146.1| hemimethylated DNA-binding region [Sphingopyxis alaskensis RB2256]
gi|98976662|gb|ABF52813.1| Hemimethylated DNA-binding region [Sphingopyxis alaskensis RB2256]
Length = 124
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 204 ARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVH 263
AR F G V H++F +R V+ +DPV S W E A E+++ QP+Y +L + +
Sbjct: 19 ARARFAPGDIVRHRMFDFRGVVFDIDPVFANSDEWYE-AIPEEIRPAKEQPYYHLLAE-N 76
Query: 264 ADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTD 302
D + +AYV+++NL+A D DHP I +F G +
Sbjct: 77 GD-SSYIAYVSQQNLVADG--DGGPIDHPQIETMFDGME 112
>gi|397524992|ref|XP_003832463.1| PREDICTED: F-box only protein 21 [Pan paniscus]
Length = 469
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 343 CYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 400
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 401 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 445
>gi|358369013|dbj|GAA85628.1| F-box domain protein [Aspergillus kawachii IFO 4308]
Length = 509
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+R+GQ H+ + YRA+I G D C WM +++LQ G Q FY VLV+ +
Sbjct: 401 YRVGQVFRHRRYDYRAIITGWDTECGAGEQWMRRMGIDRLQGGRHQSFYHVLVEDKS--- 457
Query: 268 ILVAYVAEENL 278
V YVAEEN+
Sbjct: 458 --VRYVAEENI 466
>gi|357975002|ref|ZP_09138973.1| hemimethylated DNA binding protein [Sphingomonas sp. KC8]
Length = 126
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 11/107 (10%)
Query: 194 ASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQ 253
A A A +ARFA +G V H++ +R VI +DPV S W + A E ++ Q
Sbjct: 13 AQLVAPAVTHARFA--IGDVVRHRLLEFRGVIFDVDPVFANSEEWYD-AIPEGVRPARDQ 69
Query: 254 PFYQVLVDVHADPNILVAYVAEENLLA--SDQPDMARFDHPYISFLF 298
PFY +L + +AD + VAYV+++NL SD+P DHP IS +F
Sbjct: 70 PFYHLLAE-NADSS-YVAYVSQQNLEHDQSDEP----VDHPAISGIF 110
>gi|440638435|gb|ELR08354.1| hypothetical protein GMDG_03149 [Geomyces destructans 20631-21]
Length = 602
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDV 262
+ + + +GQ HK +GY AVI G D C +S WME V+ L++G Q FY LV+
Sbjct: 492 HGKIQYEVGQVFQHKRYGYTAVITGWDVECTMNSRWMEQNHVDTLRKGQHQSFYHALVE- 550
Query: 263 HADPNILVAYVAEEN--LLASDQP 284
+ + VAEEN ++ D P
Sbjct: 551 ----DTSIRCVAEENVEVIEPDNP 570
>gi|83593699|ref|YP_427451.1| hemimethylated DNA-binding region [Rhodospirillum rubrum ATCC
11170]
gi|386350444|ref|YP_006048692.1| hemimethylated DNA-binding region [Rhodospirillum rubrum F11]
gi|83576613|gb|ABC23164.1| Hemimethylated DNA-binding region [Rhodospirillum rubrum ATCC
11170]
gi|346718880|gb|AEO48895.1| hemimethylated DNA-binding region [Rhodospirillum rubrum F11]
Length = 109
Score = 58.5 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+R+GQ V H+++ +R VI +DPV + W + A E ++ QPFY +L + +
Sbjct: 8 YRIGQVVRHRVYPFRGVIFDVDPVFNNTEEWYD-AIPEDIRPARDQPFYHLLAE--NGES 64
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLF 298
AYV+E+NLLA D P + HP ++ +F
Sbjct: 65 TYTAYVSEQNLLAEDNPRPVQ--HPELAEMF 93
>gi|350561945|ref|ZP_08930782.1| hemimethylated DNA binding protein [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349780263|gb|EGZ34598.1| hemimethylated DNA binding protein [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 106
Score = 58.5 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 12/88 (13%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G+ V+H+ FGYR VI G+DPV + W E V + + +P+Y VLVD A
Sbjct: 7 FSVGELVHHRKFGYRGVIVGVDPVFAGTDEWYE--AVARSRPPRDRPWYHVLVDGQAHS- 63
Query: 268 ILVAYVAEENLLAS------DQPDMARF 289
YVAE +L A D PD+ R+
Sbjct: 64 ---TYVAERHLEADTSGMQVDHPDLGRY 88
>gi|92117577|ref|YP_577306.1| hemimethylated DNA-binding region [Nitrobacter hamburgensis X14]
gi|91800471|gb|ABE62846.1| Hemimethylated DNA-binding region [Nitrobacter hamburgensis X14]
Length = 110
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 60/107 (56%), Gaps = 7/107 (6%)
Query: 204 ARFA-FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDV 262
AR A F++GQ V H+IF +R VI +DPV + W ++ E ++ QPFY +L +
Sbjct: 4 ARIARFQIGQIVRHRIFPFRGVIFDIDPVFNNTEEWW-LSIPENVRPHKDQPFYHLLAE- 61
Query: 263 HADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIP 309
AD VAYV+E+NLL D + R H ++ +F D +G + P
Sbjct: 62 SADSE-YVAYVSEQNLLPDDTSEPIR--HSQVTEIFV-KDKSGGYRP 104
>gi|383856996|ref|XP_003703992.1| PREDICTED: F-box only protein 21-like [Megachile rotundata]
Length = 619
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+ +G + HKI Y VI G D C S+ WM V++L G QPFY V V+ +
Sbjct: 499 YAIGLIMEHKILRYLCVITGWDTRCMASTEWMNEMNVDELTHGADQPFYNVFVNDGS--- 555
Query: 268 ILVAYVAEENLLASDQPD 285
YVA+ENL + PD
Sbjct: 556 --CHYVAQENLQLASNPD 571
>gi|347841269|emb|CCD55841.1| similar to F-box domain-containing protein [Botryotinia fuckeliana]
Length = 605
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 205 RFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHA 264
R F++GQ H+ +GY I G D C S+W+ Q++ G +Q FY VLV+
Sbjct: 497 RVKFKIGQVFRHQRYGYTGAIIGWDVGCHMGSNWIAQHQIDSYPGGRNQSFYHVLVE--- 553
Query: 265 DPNILVAYVAEENLLASDQPDMA 287
+ + YVAE+N+ QPD++
Sbjct: 554 --DASLRYVAEDNIEIVTQPDLS 574
>gi|393723748|ref|ZP_10343675.1| hemimethylated DNA binding protein [Sphingomonas sp. PAMC 26605]
Length = 126
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 7/114 (6%)
Query: 185 CKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQV 244
+ + +A +ARFA +G V H++F +R V+ +DPV S W + A
Sbjct: 4 TPITSPPFSAEIPLPPISHARFA--IGDVVRHRMFDFRGVVFDVDPVFANSDEWYD-AIP 60
Query: 245 EKLQQGPSQPFYQVLVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLF 298
E ++ QPFY +L + + VAYV+++NL+ D + DHP IS LF
Sbjct: 61 ENIRPRKDQPFYHLLAENME--SSYVAYVSQQNLVPDDLDEPV--DHPAISGLF 110
>gi|156394187|ref|XP_001636708.1| predicted protein [Nematostella vectensis]
gi|156223813|gb|EDO44645.1| predicted protein [Nematostella vectensis]
Length = 584
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 16/103 (15%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDV 262
+++ +++G + H+ + Y VI G DP C S +W++ V++L G SQPFY VL D
Sbjct: 471 HSKVIYKVGMVMRHRRYHYGCVIWGWDPFCNMSDAWIQQMGVDRLPNGRSQPFYNVLGD- 529
Query: 263 HADPNILVAYVAEENLLA------SDQPDMARF-----DHPYI 294
+ Y AEENL+ + PD+ ++ H YI
Sbjct: 530 ----DGTSRYAAEENLVIETGQEFNRHPDLGKYFKAWKGHRYI 568
>gi|410923547|ref|XP_003975243.1| PREDICTED: F-box only protein 21-like [Takifugu rubripes]
Length = 612
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 200 AFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVL 259
A E+ + +G + HK GY VI G DP C + W+ +V L GP+QPFY VL
Sbjct: 466 APEHLEVQYSVGLIMKHKRSGYNCVIYGWDPKCTMNQEWITTMRVNLLPNGPNQPFYNVL 525
Query: 260 VDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLF 298
V + Y A+ENL P HP + F
Sbjct: 526 VQ-----DGTCRYAAQENLEPHSAP--MEIGHPEVGRYF 557
>gi|430762309|ref|YP_007218166.1| hemimethylated DNA binding protein [Thioalkalivibrio
nitratireducens DSM 14787]
gi|430011933|gb|AGA34685.1| hemimethylated DNA binding protein [Thioalkalivibrio
nitratireducens DSM 14787]
Length = 106
Score = 58.2 bits (139), Expect = 6e-06, Method: Composition-based stats.
Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 16/90 (17%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLV--DVHAD 265
F +G+ V+H+ FGYR VI G+DPV S W E V + + QP+Y VLV D H+
Sbjct: 7 FSVGELVHHRKFGYRGVIVGVDPVFAGSDEWYE--AVARSRPPRDQPWYHVLVDGDTHS- 63
Query: 266 PNILVAYVAEENLLAS------DQPDMARF 289
YVAE +L A + PD+ R+
Sbjct: 64 -----TYVAERHLEADTSGVQIEHPDLGRY 88
>gi|398389955|ref|XP_003848438.1| hypothetical protein MYCGRDRAFT_77046 [Zymoseptoria tritici IPO323]
gi|339468313|gb|EGP83414.1| hypothetical protein MYCGRDRAFT_77046 [Zymoseptoria tritici IPO323]
Length = 621
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+++G + HK FGY + G D C W+E +V++L +G Q FY V+ D +
Sbjct: 511 YKIGTWMRHKRFGYEGFVVGWDATCGAEERWVEQMRVDELSRGREQGFYNVVAD-----D 565
Query: 268 ILVAYVAEENLLA 280
+ YVAEEN++A
Sbjct: 566 KTIRYVAEENIIA 578
>gi|327351397|gb|EGE80254.1| F-box domain-containing protein [Ajellomyces dermatitidis ATCC
18188]
Length = 600
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
E+ +++GQ H+ +GY AVI G D C WM+ +++L+ G Q FY VLV
Sbjct: 486 EHKHVKYKVGQVFRHRRYGYVAVITGWDAECGAGEQWMQRMGIDRLRAGRHQSFYHVLVS 545
Query: 262 VHADPNILVAYVAEENL 278
+ V YVAEEN+
Sbjct: 546 DKS-----VRYVAEENI 557
>gi|75675700|ref|YP_318121.1| hemimethylated DNA-binding region [Nitrobacter winogradskyi Nb-255]
gi|74420570|gb|ABA04769.1| hemimethylated DNA-binding region [Nitrobacter winogradskyi Nb-255]
Length = 114
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F++GQ V H+I+ +R VI +DPV + W ++ E ++ QPFY +L + +AD
Sbjct: 13 FQIGQIVRHRIYSFRGVIFDIDPVFNNTEEWW-LSIPENVRPHKDQPFYHMLAE-NADSE 70
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAG 305
VAYV+E+NLL D + R H ++ +F ++ G
Sbjct: 71 -YVAYVSEQNLLPDDSGEPIR--HSQVTEIFIQDESGG 105
>gi|395492336|ref|ZP_10423915.1| hemimethylated DNA binding protein [Sphingomonas sp. PAMC 26617]
Length = 126
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 7/114 (6%)
Query: 185 CKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQV 244
+++ + +ARFA +G V H++F +R V+ +DP+ S W + A
Sbjct: 4 TPIQSPPFDTTIALPPISHARFA--IGAVVRHRMFDFRGVVFDIDPIFANSDEWYD-AIP 60
Query: 245 EKLQQGPSQPFYQVLVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLF 298
E ++ QPFY +L + + VAYV+++NL+ D + DHP I+ LF
Sbjct: 61 ENIRPRKDQPFYHLLAENTE--STYVAYVSQQNLIPDDTDEPV--DHPAIAGLF 110
>gi|404252719|ref|ZP_10956687.1| hemimethylated DNA binding protein [Sphingomonas sp. PAMC 26621]
Length = 126
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 7/114 (6%)
Query: 185 CKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQV 244
+++ + +ARFA +G V H++F +R V+ +DP+ S W + A
Sbjct: 4 TPIQSPPFDTTIALPPISHARFA--IGAVVRHRMFDFRGVVFDIDPIFANSDEWYD-AIP 60
Query: 245 EKLQQGPSQPFYQVLVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLF 298
E ++ QPFY +L + + VAYV+++NL+ D + DHP I+ LF
Sbjct: 61 ENIRPRKDQPFYHLLAENTE--STYVAYVSQQNLIPDDTDEPV--DHPAIAGLF 110
>gi|153870135|ref|ZP_01999596.1| Hemimethylated DNA-binding region [Beggiatoa sp. PS]
gi|152073396|gb|EDN70401.1| Hemimethylated DNA-binding region [Beggiatoa sp. PS]
Length = 104
Score = 57.8 bits (138), Expect = 7e-06, Method: Composition-based stats.
Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 12/93 (12%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +GQ V H++F YR VI +DP S W ++ V K QP+Y+VL VH PN
Sbjct: 7 FFIGQLVTHQLFQYRGVIIDVDPYFMLSEQWYDV--VAKSHPPKDQPWYRVL--VHNVPN 62
Query: 268 ILVAYVAEENLLA--SDQPDMARFDHPYISFLF 298
YVA+ NL+A SD+P +HP I+ F
Sbjct: 63 --QTYVAQRNLIADSSDEP----INHPEINQYF 89
>gi|189534325|ref|XP_696130.3| PREDICTED: f-box only protein 21 [Danio rerio]
Length = 637
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 8/118 (6%)
Query: 200 AFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVL 259
A E+ F G + HK GY VI G DP C S W+ +V +L +G QPFY VL
Sbjct: 488 APEHRDVQFSTGLIMKHKRSGYNCVIYGWDPKCTMSQEWINTMRVHQLSKGADQPFYNVL 547
Query: 260 VDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
V + Y A+ENL P HP I ++ + +I ++L+ +Y
Sbjct: 548 VQ-----DGTCRYAAQENLEPHSAP--LEIAHPEIG-RYFNEYSETHYISNEELQARY 597
>gi|449304277|gb|EMD00285.1| hypothetical protein BAUCODRAFT_63524 [Baudoinia compniacensis UAMH
10762]
Length = 603
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ ++G H+ +GY +I G D C W+E +V++L +G QPFY V+ D
Sbjct: 497 SHKIGTYFQHRRYGYEGMIVGWDTKCAAEPRWIEQMRVDELPRGREQPFYNVVAD----- 551
Query: 267 NILVAYVAEENL 278
+ V YVAEEN+
Sbjct: 552 DKTVRYVAEENI 563
>gi|326930072|ref|XP_003211176.1| PREDICTED: f-box only protein 21-like [Meleagris gallopavo]
Length = 683
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
++ F +G + HK +GY VI G DP C W+ V L GP QPFY VLV+
Sbjct: 420 KHKEVCFSIGLIMKHKRYGYNCVIYGWDPACMMGHEWIRNMNVHSLPHGPHQPFYNVLVE 479
>gi|348533418|ref|XP_003454202.1| PREDICTED: F-box only protein 21-like [Oreochromis niloticus]
Length = 638
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 200 AFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVL 259
A E+ + +G + HK GY VI G DP C S W+ +V +L G +QPFY VL
Sbjct: 488 APEHLEVQYSVGLIMKHKRSGYNCVIYGWDPKCTMSPEWISTMRVHQLSNGANQPFYNVL 547
Query: 260 VDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLF 298
V + Y A+ENL P HP + F
Sbjct: 548 VQ-----DGTCRYAAQENLEPHSAP--LEIGHPEVGRYF 579
>gi|197104876|ref|YP_002130253.1| hypothetical protein PHZ_c1410 [Phenylobacterium zucineum HLK1]
gi|196478296|gb|ACG77824.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 188
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 64/137 (46%), Gaps = 24/137 (17%)
Query: 178 ADLRDQICKLEAESLAASATAL------------AFENARFA-FRLGQKVNHKIFGYRAV 224
D ++ EA+ L ATAL F R A F +GQ V H+++ +R V
Sbjct: 44 GDCSKRLTASEAQPLNGRATALRSPSSQQMGSRFEFMGTRLAKFTIGQVVRHRVYPFRGV 103
Query: 225 ICGMDPVCCESSS-WMEIAQVEKLQQGPSQPFYQVLVDVHADPNILVAYVAEENLLA--S 281
I +DP + W+ I E ++ QPFY +L + D + VAYV+E+NL+ S
Sbjct: 104 IFDVDPTFNNTEEYWLSIP--EHIRPHKDQPFYHLLAE--NDDSAYVAYVSEQNLVPDES 159
Query: 282 DQPDMARFDHPYISFLF 298
QP HP + LF
Sbjct: 160 GQP----VGHPQATLLF 172
>gi|451855551|gb|EMD68843.1| hypothetical protein COCSADRAFT_33702 [Cochliobolus sativus ND90Pr]
Length = 597
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+F++GQ HK +GY VI G D VC + W++ +V+ L G +Q FY VLV D
Sbjct: 489 SFKVGQLFQHKRYGYEGVITGWDVVCDANEDWIQNTRVDSLPNGRNQAFYHVLV---CDK 545
Query: 267 NILVAYVAEENL 278
+ V YVA EN+
Sbjct: 546 S--VRYVAAENI 555
>gi|452004997|gb|EMD97453.1| hypothetical protein COCHEDRAFT_1220865 [Cochliobolus
heterostrophus C5]
Length = 597
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+F++GQ HK +GY VI G D VC + W++ +V+ L G +Q FY VLV D
Sbjct: 489 SFKVGQLFQHKRYGYEGVITGWDVVCDANEDWIQNTRVDSLPNGRNQAFYHVLV---CDK 545
Query: 267 NILVAYVAEENL 278
+ V YVA EN+
Sbjct: 546 S--VRYVAAENI 555
>gi|67904144|ref|XP_682328.1| hypothetical protein AN9059.2 [Aspergillus nidulans FGSC A4]
gi|40742702|gb|EAA61892.1| hypothetical protein AN9059.2 [Aspergillus nidulans FGSC A4]
gi|259485530|tpe|CBF82629.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 477
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 200 AFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVL 259
+FE+ + +GQ H+ + Y A+I G D C WM ++ LQ G Q FY V+
Sbjct: 361 SFEHKSVKYHIGQVFRHRRYNYTAIITGWDAECGAGEQWMRRMGIDHLQSGRHQSFYHVI 420
Query: 260 VDVHADPNILVAYVAEENL 278
V+ + V YVAEEN+
Sbjct: 421 VEDKS-----VRYVAEENI 434
>gi|320040175|gb|EFW22108.1| hypothetical protein CPSG_00007 [Coccidioides posadasii str.
Silveira]
Length = 586
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
++ +R+GQ H+ + Y AVI G DP C WM+ +++L+ G Q FY V V+
Sbjct: 472 DHTNIKYRVGQVFRHRRYNYVAVIIGWDPECGAREEWMQQMGIDRLRAGRHQSFYHVCVE 531
Query: 262 VHADPNILVAYVAEENL 278
+ V YVAEEN+
Sbjct: 532 DKS-----VRYVAEENI 543
>gi|303321432|ref|XP_003070710.1| hemimethylated DNA binding domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240110407|gb|EER28565.1| hemimethylated DNA binding domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 589
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
++ +R+GQ H+ + Y AVI G DP C WM+ +++L+ G Q FY V V+
Sbjct: 475 DHTNIKYRVGQVFRHRRYNYVAVIIGWDPECGAREEWMQQMGIDRLRAGRHQSFYHVCVE 534
Query: 262 VHADPNILVAYVAEENL 278
+ V YVAEEN+
Sbjct: 535 DKS-----VRYVAEENI 546
>gi|327276144|ref|XP_003222830.1| PREDICTED: f-box only protein 21-like [Anolis carolinensis]
Length = 620
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 58/129 (44%), Gaps = 20/129 (15%)
Query: 206 FAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHAD 265
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 498 ICYSVGMIMKHKRYGYNCVIYGWDPSCMMGHEWIRNMNVHSLPLGAHQPFYNVLVEDGS- 556
Query: 266 PNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAG-DFIPIKQLREKYNRPRYEV 324
Y A+ENL + +M ++ P+ Y T+ AG ++ +L +Y
Sbjct: 557 ----CRYAAQENL----EHNMEPYEIPHPDIGRYFTEFAGTHYVANTELEIRY------- 601
Query: 325 PTDPEDEEL 333
PED EL
Sbjct: 602 ---PEDLEL 607
>gi|119195523|ref|XP_001248365.1| hypothetical protein CIMG_02136 [Coccidioides immitis RS]
gi|392862418|gb|EAS36940.2| hemimethylated DNA binding domain-containing protein [Coccidioides
immitis RS]
Length = 589
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
++ +R+GQ H+ + Y AVI G DP C WM+ +++L+ G Q FY V V+
Sbjct: 475 DHTNIKYRVGQVFRHRRYNYVAVIIGWDPECGAREEWMQQMGIDRLRAGRHQSFYHVCVE 534
Query: 262 VHADPNILVAYVAEENL 278
+ V YVAEEN+
Sbjct: 535 DKS-----VRYVAEENI 546
>gi|425778589|gb|EKV16707.1| hypothetical protein PDIG_18960 [Penicillium digitatum PHI26]
Length = 522
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDV 262
NA +++GQ H+ + Y A+I G D C WM +++L+ G Q FY VL
Sbjct: 406 NANIQYKVGQIFRHRRYHYEAIITGWDSECGAGEQWMRRMGIDRLEAGRHQSFYHVLKHS 465
Query: 263 HADPNILVAYVAEENL 278
AD + V YVAEEN+
Sbjct: 466 VADRS--VRYVAEENI 479
>gi|425784147|gb|EKV21941.1| hypothetical protein PDIP_01660 [Penicillium digitatum Pd1]
Length = 583
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDV 262
NA +++GQ H+ + Y A+I G D C WM +++L+ G Q FY VL
Sbjct: 467 NANIQYKVGQIFRHRRYHYEAIITGWDSECGAGEQWMRRMGIDRLEAGRHQSFYHVLKHS 526
Query: 263 HADPNILVAYVAEENL 278
AD + V YVAEEN+
Sbjct: 527 VADRS--VRYVAEENI 540
>gi|86749962|ref|YP_486458.1| hemimethylated DNA-binding region [Rhodopseudomonas palustris HaA2]
gi|91977098|ref|YP_569757.1| hemimethylated DNA-binding region [Rhodopseudomonas palustris
BisB5]
gi|86572990|gb|ABD07547.1| Hemimethylated DNA-binding region [Rhodopseudomonas palustris HaA2]
gi|91683554|gb|ABE39856.1| Hemimethylated DNA-binding region [Rhodopseudomonas palustris
BisB5]
Length = 110
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F++GQ V H+IF +R V+ +DP + W ++ E+++ QPFY +L + +AD
Sbjct: 9 FQIGQIVRHRIFSFRGVVFDIDPEFNNTEEWW-LSIPEEVRPHKDQPFYHLLAE-NADSE 66
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIP 309
VAYV+E+NLL D + R H ++ +F D AG + P
Sbjct: 67 -YVAYVSEQNLLPDDSGEPIR--HSQVAEIFV-KDKAGGYRP 104
>gi|453081032|gb|EMF09082.1| F-box only protein [Mycosphaerella populorum SO2202]
Length = 589
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 209 RLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPNI 268
R+G HK + Y VI G D C W+E +V+ L +G QPFY ++ D +
Sbjct: 485 RIGTHFRHKRYDYEGVIVGWDRRCSAEQRWIEQMRVDDLPRGREQPFYNIVADDKS---- 540
Query: 269 LVAYVAEENL-LASDQP 284
V YVAEEN+ + D+P
Sbjct: 541 -VRYVAEENIEVVRDEP 556
>gi|255945239|ref|XP_002563387.1| Pc20g08640 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588122|emb|CAP86193.1| Pc20g08640 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 585
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVL-VD 261
NA +R+GQ H+ + Y A+I G D C WM +++L+ G Q FY VL V
Sbjct: 468 NANIQYRVGQVFRHRRYHYEAIITGWDSECGAGEQWMRRMGIDRLEAGRHQSFYHVLWVV 527
Query: 262 VHADPNILVAYVAEENL 278
+ AD + V YVAEEN+
Sbjct: 528 LVADRS--VRYVAEENI 542
>gi|407973207|ref|ZP_11154119.1| hemimethylated DNA binding protein [Nitratireductor indicus C115]
gi|407431048|gb|EKF43720.1| hemimethylated DNA binding protein [Nitratireductor indicus C115]
Length = 110
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
FR+GQ V H++F +R V+ +DP + W E E ++ QPFY +L + D
Sbjct: 9 FRIGQVVKHRLFSFRGVVFDVDPEFNNTEEWYEAIPAE-VRPRKDQPFYHLLAE--NDET 65
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGT 301
VAYV+E+NL A + + R HP ++ F T
Sbjct: 66 EYVAYVSEQNLQADESGEPMR--HPQLAEFFVET 97
>gi|119474795|ref|ZP_01615148.1| hypothetical protein GP2143_13286 [marine gamma proteobacterium
HTCC2143]
gi|119450998|gb|EAW32231.1| hypothetical protein GP2143_13286 [marine gamma proteobacterium
HTCC2143]
Length = 109
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +GQ V H+++ +R VI +DP + W + + E ++ QP+Y +L + D N
Sbjct: 8 FNIGQIVRHRLYPFRGVIFDVDPTFNNTEEWWQ-SIPEDVRPKKDQPYYHLLAE--NDAN 64
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDF 307
+AYV+E+NLL D + + HP + LF + GDF
Sbjct: 65 AYIAYVSEQNLLIDDSGEPVQ--HPQVQELF--GEFKGDF 100
>gi|39935735|ref|NP_948011.1| hemimethylated DNA-binding region [Rhodopseudomonas palustris
CGA009]
gi|192291322|ref|YP_001991927.1| hemimethylated DNA binding protein [Rhodopseudomonas palustris
TIE-1]
gi|39649588|emb|CAE28110.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
gi|192285071|gb|ACF01452.1| hemimethylated DNA binding protein [Rhodopseudomonas palustris
TIE-1]
Length = 110
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F++GQ V H+IF +R V+ +DP + W +A E+++ QPFY +L + +A+
Sbjct: 9 FQIGQIVRHRIFSFRGVVFDIDPEFANTEEWW-LAIPEEVRPSKDQPFYHLLAE-NAESE 66
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIP 309
VAYV+E+NLL D + R H ++ +F D +G + P
Sbjct: 67 -YVAYVSEQNLLPDDSGEPIR--HSQVAEIFI-KDKSGGYRP 104
>gi|15965394|ref|NP_385747.1| hypothetical protein SMc00949 [Sinorhizobium meliloti 1021]
gi|334316278|ref|YP_004548897.1| hemimethylated DNA binding protein [Sinorhizobium meliloti AK83]
gi|384529461|ref|YP_005713549.1| hemimethylated DNA binding protein [Sinorhizobium meliloti BL225C]
gi|384536211|ref|YP_005720296.1| hypothetical protein SM11_chr1767 [Sinorhizobium meliloti SM11]
gi|407720589|ref|YP_006840251.1| hypothetical protein BN406_01380 [Sinorhizobium meliloti Rm41]
gi|418400445|ref|ZP_12973985.1| hemimethylated DNA binding protein [Sinorhizobium meliloti
CCNWSX0020]
gi|433613423|ref|YP_007190221.1| hemimethylated DNA binding domain protein [Sinorhizobium meliloti
GR4]
gi|15074574|emb|CAC46220.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
gi|333811637|gb|AEG04306.1| hemimethylated DNA binding protein [Sinorhizobium meliloti BL225C]
gi|334095272|gb|AEG53283.1| hemimethylated DNA binding protein [Sinorhizobium meliloti AK83]
gi|336033103|gb|AEH79035.1| hypothetical protein SM11_chr1767 [Sinorhizobium meliloti SM11]
gi|359505497|gb|EHK78019.1| hemimethylated DNA binding protein [Sinorhizobium meliloti
CCNWSX0020]
gi|407318821|emb|CCM67425.1| hypothetical protein BN406_01380 [Sinorhizobium meliloti Rm41]
gi|429551613|gb|AGA06622.1| hemimethylated DNA binding domain protein [Sinorhizobium meliloti
GR4]
Length = 109
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +GQ V H++F +R V+ +DP + W A ++++ QPFY + + D +
Sbjct: 8 FEIGQVVRHRMFPFRGVVFDVDPEYANTEEWWN-AIPQEIRPEKDQPFYHLFAE--NDES 64
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIP 309
VAYV+E+NL++ D R HP + LF D AG + P
Sbjct: 65 EYVAYVSEQNLVSDDSDRPIR--HPQVDALFEKAD-AGHYKP 103
>gi|312114435|ref|YP_004012031.1| hemimethylated DNA binding protein [Rhodomicrobium vannielii ATCC
17100]
gi|311219564|gb|ADP70932.1| hemimethylated DNA binding protein [Rhodomicrobium vannielii ATCC
17100]
Length = 118
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 7/102 (6%)
Query: 204 ARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVH 263
ARFA +G+ V H+ F +R +I +DP + W +A E ++ QPFY +L +
Sbjct: 15 ARFA--IGEVVKHRFFPFRGIIFDVDPEFANTDEWW-LAIPEDIRPEKDQPFYHLLAE-- 69
Query: 264 ADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAG 305
+ VAYV+E+NLL D + R HP + LF + G
Sbjct: 70 NEETEYVAYVSEQNLLPDDSGEPLR--HPQLDELFDELENGG 109
>gi|384261281|ref|YP_005416467.1| Hemimethylated DNA-binding region [Rhodospirillum photometricum DSM
122]
gi|378402381|emb|CCG07497.1| Hemimethylated DNA-binding region [Rhodospirillum photometricum DSM
122]
Length = 138
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 191 SLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQG 250
S A AT + E F +GQ V HK+ +R VI +DPV + W A E ++
Sbjct: 20 SGARGATGGSMEIRVAKFHIGQVVRHKVHPFRGVIVDVDPVFDNTEEWYA-AIPEAIRPS 78
Query: 251 PSQPFYQVLVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLF 298
QPFY +L + AYV+E+NLL + P HP I+ F
Sbjct: 79 RDQPFYHLLAE--NGETTYTAYVSEQNLLPEEDP--TPLTHPAITDFF 122
>gi|402849696|ref|ZP_10897922.1| putative Hemimethylated DNA-binding region [Rhodovulum sp. PH10]
gi|402499979|gb|EJW11665.1| putative Hemimethylated DNA-binding region [Rhodovulum sp. PH10]
Length = 114
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 5/102 (4%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+ +GQ V H+I+ +R VI +DPV + W E A E+ + QPFY + + +A+
Sbjct: 12 YTIGQVVRHRIYPFRGVIFDVDPVFANTDEWYE-AIPEESRPNKDQPFYHLFAE-NAE-T 68
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIP 309
+AYV+E+NLL + + R HP +S +F + G + P
Sbjct: 69 EYIAYVSEQNLLPDESGEPLR--HPQVSEVFERDEEDGSYRP 108
>gi|421604437|ref|ZP_16046617.1| hypothetical protein BCCGELA001_37727 [Bradyrhizobium sp.
CCGE-LA001]
gi|404263453|gb|EJZ28953.1| hypothetical protein BCCGELA001_37727 [Bradyrhizobium sp.
CCGE-LA001]
Length = 110
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F++GQ V H+IF +R VI +DP + W ++ E+++ QPFY +L + +A+
Sbjct: 9 FQIGQVVRHRIFSFRGVIFDIDPEFNNTEEWW-LSIPEEVRPHKDQPFYHLLAE-NAESE 66
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIP 309
VAYV+E+NLL D + R H ++ +F D AG + P
Sbjct: 67 -YVAYVSEQNLLPDDSGEPVR--HSQVAEIFI-KDKAGGYRP 104
>gi|395514055|ref|XP_003761236.1| PREDICTED: F-box only protein 21 [Sarcophilus harrisii]
Length = 634
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 18/127 (14%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 509 CYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 566
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKYNRPRYEVPT 326
Y A+ENL + +P HP + ++ T ++ +L +Y
Sbjct: 567 ---CRYAAQENLEYNMEPQ--EISHPDVG-RYFSEFTGTHYVANTELEIRY--------- 611
Query: 327 DPEDEEL 333
PED E
Sbjct: 612 -PEDSEF 617
>gi|338974449|ref|ZP_08629809.1| hypothetical protein CSIRO_2904 [Bradyrhizobiaceae bacterium SG-6C]
gi|414166800|ref|ZP_11423032.1| hemimethylated DNA binding domain-containing protein [Afipia
clevelandensis ATCC 49720]
gi|338232322|gb|EGP07452.1| hypothetical protein CSIRO_2904 [Bradyrhizobiaceae bacterium SG-6C]
gi|410892644|gb|EKS40436.1| hemimethylated DNA binding domain-containing protein [Afipia
clevelandensis ATCC 49720]
Length = 110
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 6/102 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F++GQ V H+IF +R VI +DPV + W ++ E+++ QPFY +L + +
Sbjct: 9 FQIGQIVRHRIFSFRGVIYDIDPVFNNTEEWW-LSIPEEMRPHKDQPFYHLLAE--NSES 65
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIP 309
VAYV+E+NLL + + R H ++ +F D +G + P
Sbjct: 66 EYVAYVSEQNLLPDESGEPIR--HSQVAEIFI-KDKSGGYRP 104
>gi|148556791|ref|YP_001264373.1| hemimethylated DNA binding protein [Sphingomonas wittichii RW1]
gi|148501981|gb|ABQ70235.1| hemimethylated DNA binding protein [Sphingomonas wittichii RW1]
Length = 130
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 65/115 (56%), Gaps = 14/115 (12%)
Query: 191 SLAASATAL-------AFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQ 243
S+ A+A AL + +ARF+ +G V H++F +R V+ +DPV S W + A
Sbjct: 7 SIPAAAGALHQGIISPSISHARFS--IGDVVRHRMFEFRGVVFDVDPVFANSEEWYQ-AI 63
Query: 244 VEKLQQGPSQPFYQVLVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLF 298
E ++ QPFY + + ++D + +AYV+++NL+ + ++ DHP I+ LF
Sbjct: 64 PEDMRPAKEQPFYHLFAE-NSDSS-YIAYVSQQNLVHDESDELV--DHPAIAGLF 114
>gi|126324696|ref|XP_001374929.1| PREDICTED: f-box only protein 21 [Monodelphis domestica]
Length = 629
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 54/126 (42%), Gaps = 18/126 (14%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 504 CYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 561
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKYNRPRYEVPT 326
Y A+ENL + +P HP + ++ T ++ +L +Y
Sbjct: 562 ---CRYAAQENLEYNMEPQ--EISHPDVG-RYFSEFTGTHYVANAELEIRY--------- 606
Query: 327 DPEDEE 332
PED E
Sbjct: 607 -PEDAE 611
>gi|358058793|dbj|GAA95756.1| hypothetical protein E5Q_02413 [Mixia osmundae IAM 14324]
Length = 623
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 178 ADLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSS 237
A+ + Q +LEA +L ++T L A+ +G HK +GY VI D C
Sbjct: 441 AEAQAQTSRLEA-ALLETSTPLRRTAGSPAYTIGTVFRHKKYGYTGVIISWDLTCQAPDQ 499
Query: 238 WMEIAQVEKLQQGPSQPFYQVLVDVHADPNILVA----YVAEENL 278
W Q+ +L +G QPFYQVL D+ A YVAEEN+
Sbjct: 500 WQAQMQIHRLPRGADQPFYQVLDDMGPLDQDGSANRHRYVAEENI 544
>gi|402819205|ref|ZP_10868774.1| hypothetical protein IMCC14465_00080 [alpha proteobacterium
IMCC14465]
gi|402511909|gb|EJW22169.1| hypothetical protein IMCC14465_00080 [alpha proteobacterium
IMCC14465]
Length = 113
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 200 AFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVL 259
F + F +GQ V H++F +R VI +DP+ + W E + E ++ +QPFY +L
Sbjct: 4 TFTLKKAKFTIGQVVKHRLFPFRGVIFDVDPIFDNTDEWWE-SIPEDIRPHKNQPFYHLL 62
Query: 260 VDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTD 302
+ + +AYV+E+NLL D D+ +HP I +F D
Sbjct: 63 AE--NEETEYIAYVSEQNLLVDDL-DLP-VNHPQIDEIFGAYD 101
>gi|316934172|ref|YP_004109154.1| hemimethylated DNA-binding protein [Rhodopseudomonas palustris
DX-1]
gi|315601886|gb|ADU44421.1| hemimethylated DNA binding protein [Rhodopseudomonas palustris
DX-1]
Length = 110
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 6/102 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F++GQ V H+IF +R V+ +DP + W +A E ++ QPFY +L + +A+
Sbjct: 9 FQIGQIVRHRIFSFRGVVFDIDPEFANTEEWW-LAIPEDVRPSKDQPFYHLLAE-NAESE 66
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIP 309
VAYV+E+NLL D + R H ++ +F D +G + P
Sbjct: 67 -YVAYVSEQNLLPDDSGEPIR--HSQVAEIFI-KDKSGGYRP 104
>gi|292492714|ref|YP_003528153.1| hemimethylated DNA binding protein [Nitrosococcus halophilus Nc4]
gi|291581309|gb|ADE15766.1| hemimethylated DNA binding protein [Nitrosococcus halophilus Nc4]
Length = 105
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 201 FENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLV 260
+ +R F +GQ V HK+F YR V+ DPV S W E Q+ + Q +P+Y VLV
Sbjct: 1 MQQSRAKFGIGQLVRHKLFHYRGVVVDADPVFQGSPEWYE--QMAQSQPPKDRPWYHVLV 58
Query: 261 DVHADPNILVAYVAEENLLASDQPDMAR--FDHPYISFLF 298
D +AD YVAE NL D +R +HP I F
Sbjct: 59 D-NAD---YQTYVAERNLDL----DTSREPINHPAIELFF 90
>gi|409051841|gb|EKM61317.1| hypothetical protein PHACADRAFT_82095, partial [Phanerochaete
carnosa HHB-10118-sp]
Length = 598
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 64/167 (38%), Gaps = 30/167 (17%)
Query: 138 QLEAKRGLSSKSEAQDKAL----SIIRLRADLQKAI----DSENYALAADLRDQICKL-- 187
Q E G +E D A S I + + I DS+ A L D +C L
Sbjct: 363 QQEIVTGAPQSAEIHDSAFYAGSSWIMIEGEAGHIIPSPPDSKPLDFGAVLLDTLCPLLP 422
Query: 188 ---------------EAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVC 232
E + A + L F +G H+ + Y VI G DP C
Sbjct: 423 PVTRPAISAHYERIIEDDEARARSVKLRSNFPALKFFVGLPFMHRRYDYLGVIYGWDPTC 482
Query: 233 CESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPNILVAYVAEENLL 279
S W+E QV +L QG +QPFY V+ YVA+EN++
Sbjct: 483 MASEEWIEQMQVNRLSQGRNQPFYHVIPSEGQS-----KYVAQENII 524
>gi|156363269|ref|XP_001625968.1| predicted protein [Nematostella vectensis]
gi|156212826|gb|EDO33868.1| predicted protein [Nematostella vectensis]
Length = 204
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 42/93 (45%)
Query: 186 KLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVE 245
K A SA + + +R+GQ + HK++ YRAVI G DP W +
Sbjct: 74 KDPAGHFGMSAEVRSPRPSNVKYRVGQVIRHKLWNYRAVIVGWDPKLKAPDFWRDANHPA 133
Query: 246 KLQQGPSQPFYQVLVDVHADPNILVAYVAEENL 278
+ P Y +LVD P+ + YV EEN+
Sbjct: 134 DKKHWKDMPNYALLVDTRDRPSPQITYVPEENI 166
>gi|121717430|ref|XP_001276076.1| F-box domain protein [Aspergillus clavatus NRRL 1]
gi|119404266|gb|EAW14650.1| F-box domain protein [Aspergillus clavatus NRRL 1]
Length = 604
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
++ R +R+GQ H+ + Y A+I G D C WM +++LQ G Q FY VL +
Sbjct: 490 KHLRVKYRIGQVFCHRRYNYTAIITGWDTECDAGEQWMRRMGIDRLQAGRQQSFYHVLAE 549
Query: 262 VHADPNILVAYVAEENL 278
+ V YVAEEN+
Sbjct: 550 -----DKTVRYVAEENV 561
>gi|359398262|ref|ZP_09191285.1| hemimethylated DNA-binding region protein [Novosphingobium
pentaromativorans US6-1]
gi|357600353|gb|EHJ62049.1| hemimethylated DNA-binding region protein [Novosphingobium
pentaromativorans US6-1]
Length = 126
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 204 ARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVH 263
ARFA +G V HK +R VI +DPV S W + +E L+ QP+Y +L +
Sbjct: 23 ARFA--IGDVVRHKQHDFRGVIFDIDPVFANSEEWYQSIPLE-LRPSREQPYYHLLAE-- 77
Query: 264 ADPNILVAYVAEENLLASDQPDMARFDHPYISFLF 298
+ + VAYV++ENLL D D +HP +S +F
Sbjct: 78 NEDSSYVAYVSQENLL--DDADGGPVEHPSVSEIF 110
>gi|225685099|gb|EEH23383.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 597
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
E+ +++GQ H+ + Y AVI G D C WM+ +++L+ G Q FY VLV
Sbjct: 483 EHKNVKYKIGQVFRHRRYDYIAVITGWDAECGAGEQWMQQMGIDRLRAGKHQSFYHVLVS 542
Query: 262 VHADPNILVAYVAEENL 278
+ V YVAEEN+
Sbjct: 543 DKS-----VRYVAEENI 554
>gi|239614386|gb|EEQ91373.1| F-box domain-containing protein [Ajellomyces dermatitidis ER-3]
Length = 597
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
E+ +++GQ H+ + Y AVI G D C WM+ +++L+ G Q FY VLV
Sbjct: 483 EHKHVKYKIGQVFRHRRYDYVAVITGWDAECGAGEQWMQRMGIDRLRAGRHQSFYHVLVS 542
Query: 262 VHADPNILVAYVAEENL 278
+ V YVAEEN+
Sbjct: 543 DKS-----VRYVAEENI 554
>gi|115524801|ref|YP_781712.1| hemimethylated DNA-binding region [Rhodopseudomonas palustris
BisA53]
gi|115518748|gb|ABJ06732.1| hemimethylated DNA binding protein [Rhodopseudomonas palustris
BisA53]
Length = 110
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F++GQ V H+IF +R VI +DP + W +A E+++ QPFY +L + +
Sbjct: 9 FQIGQIVRHRIFSFRGVIFDIDPEFNNTEEWW-LAIPEEVRPPKDQPFYHLLAE--NSES 65
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIP 309
+AYV+E+NLL D + R H ++ +F D +G + P
Sbjct: 66 EYIAYVSEQNLLPDDSGEPIR--HSQLAEIFV-EDKSGGYRP 104
>gi|297183852|gb|ADI19975.1| hypothetical protein [uncultured marine bacterium EB000_55B11]
Length = 108
Score = 55.5 bits (132), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 8/105 (7%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDV 262
NA+F+ +GQ V H+ +R VI +DP + W E + EK + QPFY +L +
Sbjct: 5 NAKFS--IGQVVRHRKHPFRGVIFDIDPTFSNTDXWWE-SIPEKHRPIKEQPFYHLLAE- 60
Query: 263 HADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDF 307
D + VAYV+E+NLL + D +HP ++ +F G T G +
Sbjct: 61 -NDESFYVAYVSEQNLLIDETGD--PIEHPEVAEMF-GEMTNGKY 101
>gi|198412658|ref|XP_002129491.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 565
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 200 AFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVL 259
A ENAR F +G H +GY V+ G D C S W + + +L G +QP+Y VL
Sbjct: 438 ADENARVMFSVGTVTRHLKYGYVCVVRGWDNYCDMSVRWQRLMGIPQLNDGATQPYYNVL 497
Query: 260 VDVHADPNILVAYVAEENL 278
VH D + Y A+ENL
Sbjct: 498 --VHEDGS--ERYAAQENL 512
>gi|261195791|ref|XP_002624299.1| F-box domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|239587432|gb|EEQ70075.1| F-box domain-containing protein [Ajellomyces dermatitidis SLH14081]
Length = 597
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
E+ +++GQ H+ + Y AVI G D C WM+ +++L+ G Q FY VLV
Sbjct: 483 EHKHVKYKIGQVFRHRRYDYVAVITGWDAECGAGEQWMQRMGIDRLRGGRHQSFYHVLVS 542
Query: 262 VHADPNILVAYVAEENL 278
+ V YVAEEN+
Sbjct: 543 DKS-----VRYVAEENI 554
>gi|328543856|ref|YP_004303965.1| Hemimethylated DNA binding protein [Polymorphum gilvum SL003B-26A1]
gi|326413600|gb|ADZ70663.1| Hemimethylated DNA binding protein [Polymorphum gilvum SL003B-26A1]
Length = 113
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F++GQ V H+I+ +R VI +DP + W A E ++ QPFY +L + +
Sbjct: 12 FKIGQVVRHRIYPFRGVIFDVDPTFNNTEEWWN-AIPEDVRPSRDQPFYHLLAE--NEET 68
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIP 309
VAYV+E+NL+ + D R HP + +F + G ++P
Sbjct: 69 EYVAYVSEQNLVPDETGDPIR--HPQVDEIF-EEQSDGSYLP 107
>gi|304391754|ref|ZP_07373696.1| hemimethylated DNA binding protein [Ahrensia sp. R2A130]
gi|303295983|gb|EFL90341.1| hemimethylated DNA binding protein [Ahrensia sp. R2A130]
Length = 107
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 59/108 (54%), Gaps = 10/108 (9%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F++GQ V H+++ +R V+ +DP + W + A E ++ QPFY + + +
Sbjct: 6 FQIGQVVKHRVYPFRGVVFDVDPTFDNTDEWYD-AIPEDIRPAKDQPFYHLFAE--NEET 62
Query: 268 ILVAYVAEENLL--ASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQL 313
+AYV+E+NL+ + D+P HP I +F+ TD AG + P Q+
Sbjct: 63 EYIAYVSEQNLVPDSDDEP----LRHPQIDEIFHRTD-AGAYEPRDQI 105
>gi|396484014|ref|XP_003841844.1| similar to F-box domain containing protein [Leptosphaeria maculans
JN3]
gi|312218419|emb|CBX98365.1| similar to F-box domain containing protein [Leptosphaeria maculans
JN3]
Length = 606
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 205 RFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHA 264
+ AF++GQ H+ +GY VI G D C W+ V+ L G Q FY VLV
Sbjct: 496 KVAFKVGQLFQHRRYGYEGVITGWDVACGAGEEWIMNQDVDGLPHGRDQAFYHVLV---C 552
Query: 265 DPNILVAYVAEENL 278
D + V YVAEEN+
Sbjct: 553 DKS--VRYVAEENI 564
>gi|114769828|ref|ZP_01447438.1| hypothetical protein OM2255_09676 [Rhodobacterales bacterium
HTCC2255]
gi|114549533|gb|EAU52415.1| hypothetical protein OM2255_09676 [alpha proteobacterium HTCC2255]
Length = 108
Score = 55.1 bits (131), Expect = 5e-05, Method: Composition-based stats.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 8/105 (7%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDV 262
NA+F+ +GQ V H+ +R VI +DP + W E + EK + QPFY +L +
Sbjct: 5 NAKFS--IGQVVRHRKHPFRGVIFDIDPTFSNTDEWWE-SIPEKHRPIKEQPFYHLLAE- 60
Query: 263 HADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDF 307
D + VAYV+E+NLL + D +HP ++ +F G T G +
Sbjct: 61 -NDESFYVAYVSEQNLLIDETGD--PIEHPEVAEMF-GEMTNGKY 101
>gi|386817369|ref|ZP_10104587.1| hemimethylated DNA binding protein [Thiothrix nivea DSM 5205]
gi|386421945|gb|EIJ35780.1| hemimethylated DNA binding protein [Thiothrix nivea DSM 5205]
Length = 109
Score = 55.1 bits (131), Expect = 5e-05, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
E +F +GQ ++H++F YR VI +DP + W E VE +P+Y VL+D
Sbjct: 3 EEKTASFGIGQVIHHRLFNYRGVIFDVDPDFQGTEEWFE-KNVEAGNPSKEEPWYHVLID 61
Query: 262 VHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQ 312
VAYVAE NL A + +HP + F G + GD +Q
Sbjct: 62 QDGR----VAYVAECNLEAEADDLIEPVEHPLLENFFTGFN--GDHYQARQ 106
>gi|365896313|ref|ZP_09434394.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
gi|365422946|emb|CCE06936.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
Length = 110
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F++GQ V H+IF +R VI +DP + W ++ E+++ QPFY +L + +AD
Sbjct: 9 FQIGQIVKHRIFSFRGVIFDIDPEFNNTEEWW-LSIPEEVRPHKDQPFYHLLAE-NADSE 66
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIP 309
VAYV+E+NLL + + R H ++ +F D +G + P
Sbjct: 67 -YVAYVSEQNLLPDNSGEPIR--HSQVAEIFI-KDKSGGYRP 104
>gi|114798382|ref|YP_760504.1| hemimethylated DNA binding domain-containing protein [Hyphomonas
neptunium ATCC 15444]
gi|114738556|gb|ABI76681.1| hemimethylated DNA binding domain protein [Hyphomonas neptunium
ATCC 15444]
Length = 150
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F++GQ V HK+F +R VI +DP + W + + E+++ QPFY + + D
Sbjct: 49 FQIGQVVRHKLFPFRGVIFDVDPQFANTDEWYD-SIPEEVRPRKDQPFYHLFAE--NDRT 105
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLF 298
+AYV+E+NL+ D D+ HP IS F
Sbjct: 106 HYIAYVSEQNLIPDDS-DVP-LSHPDISDWF 134
>gi|383771770|ref|YP_005450835.1| hypothetical protein S23_35230 [Bradyrhizobium sp. S23321]
gi|381359893|dbj|BAL76723.1| hypothetical protein S23_35230 [Bradyrhizobium sp. S23321]
Length = 110
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F++GQ V H+IF +R VI +DP + W ++ E+++ QPFY +L + +A+
Sbjct: 9 FQIGQVVRHRIFSFRGVIFDIDPEFNNTEEWW-LSIPEEVRPHKDQPFYHLLAE-NAESE 66
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDF 307
VAYV+E+NLL D + R H ++ +F D AG +
Sbjct: 67 -YVAYVSEQNLLPDDSGEPIR--HSQVAEIFI-KDKAGGY 102
>gi|398819213|ref|ZP_10577773.1| hemimethylated DNA binding domain containing protein
[Bradyrhizobium sp. YR681]
gi|398230086|gb|EJN16148.1| hemimethylated DNA binding domain containing protein
[Bradyrhizobium sp. YR681]
Length = 110
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F++GQ V H+IF +R VI +DP + W ++ E+++ QPFY +L + +A+
Sbjct: 9 FQIGQVVRHRIFSFRGVIFDIDPEFNNTEEWW-LSIPEEVRPHKDQPFYHLLAE-NAESE 66
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIP 309
VAYV+E+NLL + + R H ++ +F D AG + P
Sbjct: 67 -YVAYVSEQNLLPDESGEPVR--HSQVAEIFI-KDKAGGYRP 104
>gi|342321683|gb|EGU13615.1| F-box domain protein [Rhodotorula glutinis ATCC 204091]
Length = 595
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 11/112 (9%)
Query: 176 LAADLRDQI---CKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVC 232
L+A++R +I C+ E AA+ N + +G H++F Y AVI G D C
Sbjct: 447 LSAEVRPRISVLCEAIREEDAANKEQ-KLVNGEIKWPIGHVFRHRLFRYVAVIRGWDYKC 505
Query: 233 CESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPNILVAYVAEENLLASDQP 284
S W+ +V+ L G +QPFY V+VD + YVA+EN+ +D P
Sbjct: 506 EASEQWIRQMRVDTLPHGRNQPFYHVVVD-----DGSARYVAQENV--TDTP 550
>gi|325091698|gb|EGC45008.1| F-box domain-containing protein [Ajellomyces capsulatus H88]
Length = 595
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
E+ +++GQ H+ + Y AVI G D C WM+ +++L+ G Q FY VLV
Sbjct: 481 EHKNIKYKIGQVFRHRRYDYVAVITGWDAECGAGEQWMQRMGIDRLRAGRHQSFYHVLV- 539
Query: 262 VHADPNILVAYVAEENL 278
D + V YVAEEN+
Sbjct: 540 --CDKS--VRYVAEENI 552
>gi|212545096|ref|XP_002152702.1| F-box only protein, putative [Talaromyces marneffei ATCC 18224]
gi|210065671|gb|EEA19765.1| F-box only protein, putative [Talaromyces marneffei ATCC 18224]
Length = 578
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 189 AESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQ 248
+ +A + E+ +R+GQ H+ + Y+A+I G D C W+ +++LQ
Sbjct: 451 VDEMAKTVHPRGPEHQNVKYRVGQVFIHRRYDYQAIITGWDAECDAGEEWVRRMGIDQLQ 510
Query: 249 QGPSQPFYQVLVDVHADPNILVAYVAEENL 278
G Q FY LV+ + + YVAEENL
Sbjct: 511 AGRKQSFYHALVEDRS-----IRYVAEENL 535
>gi|240274230|gb|EER37747.1| F-box protein [Ajellomyces capsulatus H143]
Length = 595
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
E+ +++GQ H+ + Y AVI G D C WM+ +++L+ G Q FY VLV
Sbjct: 481 EHKNIKYKIGQVFRHRRYDYVAVITGWDAECGAGEQWMQRMGIDRLRAGRHQSFYHVLV- 539
Query: 262 VHADPNILVAYVAEENL 278
D + V YVAEEN+
Sbjct: 540 --CDKS--VRYVAEENI 552
>gi|407779772|ref|ZP_11127024.1| hemimethylated DNA binding protein [Nitratireductor pacificus
pht-3B]
gi|407298391|gb|EKF17531.1| hemimethylated DNA binding protein [Nitratireductor pacificus
pht-3B]
Length = 107
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +GQ V H++F +R VI +DP + +W + A E+++ QPFY +L + +
Sbjct: 6 FSIGQVVRHRLFDFRGVIFDVDPEFNNTEAWYQ-AIPEEMRPRKDQPFYHLLAE--NEET 62
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLR 314
VAYV+E+NLL + R HP ++ F T G + P ++L
Sbjct: 63 EYVAYVSEQNLLVDESGLPVR--HPQLAEFFIET-ADGHYTPRERLH 106
>gi|407917462|gb|EKG10770.1| F-box domain cyclin-like protein [Macrophomina phaseolina MS6]
Length = 603
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
+N R+ +GQ HK + Y VI G DP C WM ++ L G +Q FY VL +
Sbjct: 493 KNVRYG--VGQCFKHKRYHYYGVIVGWDPYCNAGDDWMHAMNIDGLPNGRNQAFYNVLCE 550
Query: 262 VHADPNILVAYVAEENL-LASDQP 284
+ YVAEEN+ + +D P
Sbjct: 551 DSSS-----RYVAEENIQITTDPP 569
>gi|299133926|ref|ZP_07027120.1| hemimethylated DNA binding protein [Afipia sp. 1NLS2]
gi|298591762|gb|EFI51963.1| hemimethylated DNA binding protein [Afipia sp. 1NLS2]
Length = 109
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F++GQ V H+ F +R VI +DP + W ++ E+++ QPFY +L + ++D
Sbjct: 8 FQIGQVVRHRSFSFRGVIFDIDPEFNNTEEWW-LSIPEEMRPHKDQPFYHLLAE-NSDSE 65
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDF 307
+AYV+E+NLL + D R H +S +F D AG +
Sbjct: 66 -YIAYVSEQNLLPDETGDPVR--HSQVSEIFI-KDKAGGY 101
>gi|289208401|ref|YP_003460467.1| hemimethylated DNA binding protein [Thioalkalivibrio sp. K90mix]
gi|288944032|gb|ADC71731.1| hemimethylated DNA binding protein [Thioalkalivibrio sp. K90mix]
Length = 106
Score = 54.7 bits (130), Expect = 6e-05, Method: Composition-based stats.
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G+ V+H FGYR VI +DPV S W E V + + +P+Y VLVD ++
Sbjct: 7 FTVGELVHHTKFGYRGVIVEVDPVYSGSDEWYE--TVARSRPPKDRPWYHVLVDGYSHS- 63
Query: 268 ILVAYVAEENLLASDQPDMA--RFDHPYISFLF 298
YVAE +L +PD + + DHP + F
Sbjct: 64 ---TYVAERHL----EPDTSGQQIDHPALGQFF 89
>gi|227822027|ref|YP_002825998.1| hemimethylated DNA-binding region [Sinorhizobium fredii NGR234]
gi|227341027|gb|ACP25245.1| hemimethylated DNA-binding region [Sinorhizobium fredii NGR234]
Length = 109
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +GQ V H+ F +R VI +DP + W + ++++ QPFY + + D +
Sbjct: 8 FEIGQIVRHRFFPFRGVIFDVDPEYANTEEWWN-SIPQEIRPSKDQPFYHLFAE--NDES 64
Query: 268 ILVAYVAEENLLA--SDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLR 314
VAYV+E+NL++ SDQP H + LF D AG + P R
Sbjct: 65 EYVAYVSEQNLVSDESDQP----IRHTQVDVLFEKAD-AGHYRPRADYR 108
>gi|198437036|ref|XP_002125379.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 245
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 192 LAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGP 251
A S+T + +R+GQ + HK++GYR VI G D C W+ ++
Sbjct: 122 FATSSTPRVPRPKKVKYRVGQVIKHKLYGYRGVIVGWDDHCKAPDLWIRRMHGDR-PTWQ 180
Query: 252 SQPFYQVLVDVHADPNILVAYVAEENL 278
+QP Y +LVD + YV EEN+
Sbjct: 181 TQPNYAILVDERDRKDSQTTYVVEENI 207
>gi|414173619|ref|ZP_11428246.1| hemimethylated DNA binding domain-containing protein [Afipia
broomeae ATCC 49717]
gi|410890253|gb|EKS38052.1| hemimethylated DNA binding domain-containing protein [Afipia
broomeae ATCC 49717]
Length = 110
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F++GQ V H+IF +R VI +DP + W ++ E+++ QPFY +L + +
Sbjct: 9 FQIGQIVRHRIFSFRGVIYDIDPEFNNTEEWW-LSIPEEMRPHKDQPFYHLLAE--NSES 65
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIP 309
VAYV+E+NLL + + R H ++ +F D +G + P
Sbjct: 66 EYVAYVSEQNLLPDESGEPIR--HSQVAEIFV-KDKSGSYRP 104
>gi|384919441|ref|ZP_10019489.1| hemimethylated DNA binding protein [Citreicella sp. 357]
gi|384466660|gb|EIE51157.1| hemimethylated DNA binding protein [Citreicella sp. 357]
Length = 108
Score = 54.3 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 39/105 (37%), Positives = 56/105 (53%), Gaps = 10/105 (9%)
Query: 205 RFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHA 264
R + LGQ V H+ +R V+ +DP + W E A E+ + +QPFY +L +
Sbjct: 5 RAKYHLGQVVRHRKHPFRGVVFDVDPEFSNTDDWYE-AIPEESRPVKNQPFYHLLAE--N 61
Query: 265 DPNILVAYVAEENLLA--SDQPDMARFDHPYISFLFYGTDTAGDF 307
D + VAYV+E+NL+A S +P DHP I LF G T G +
Sbjct: 62 DQSFYVAYVSEQNLIADYSGEP----VDHPDIPDLF-GNFTDGSY 101
>gi|402826752|ref|ZP_10875912.1| hemimethylated DNA-binding protein [Sphingomonas sp. LH128]
gi|402259708|gb|EJU09911.1| hemimethylated DNA-binding protein [Sphingomonas sp. LH128]
Length = 126
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 204 ARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVH 263
ARFA +G V H++ +R V+ +DPV S W + E ++ QPFY +L +
Sbjct: 23 ARFA--IGDVVRHRLHDFRGVVFDIDPVFANSEEWYQAIPAE-VRPKRDQPFYHLLAE-- 77
Query: 264 ADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTA 304
+D + VAYV+++NL D DHP +S +F D
Sbjct: 78 SDDSSYVAYVSQQNLTGD--ADGGPVDHPSLSQMFDDYDNG 116
>gi|90424114|ref|YP_532484.1| hemimethylated DNA-binding region [Rhodopseudomonas palustris
BisB18]
gi|90106128|gb|ABD88165.1| Hemimethylated DNA-binding region [Rhodopseudomonas palustris
BisB18]
Length = 110
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F++GQ V H+IF +R VI +DP + W ++ E+++ QPFY +L + ++D
Sbjct: 9 FQIGQIVRHRIFSFRGVIFDIDPEFNNTEEWW-LSIPEEVRPHKDQPFYHLLAE-NSDSE 66
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIP 309
VAYV+E+NLL + + R H ++ +F D +G + P
Sbjct: 67 -YVAYVSEQNLLPDESGEPIR--HSQVAEIFV-KDKSGSYRP 104
>gi|158422850|ref|YP_001524142.1| hemimethylated DNA-binding protein [Azorhizobium caulinodans ORS
571]
gi|158329739|dbj|BAF87224.1| hemimethylated DNA-binding region protein [Azorhizobium caulinodans
ORS 571]
Length = 148
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 9/100 (9%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
FR+G V H+ F +R V+ +DPV + W ++ E+++ QPFY +L + +AD N
Sbjct: 47 FRIGDVVRHRHFPFRGVVFDVDPVFDNTEEWY-LSIPEEIRPRKDQPFYHLLAE-NAD-N 103
Query: 268 ILVAYVAEENLLASDQPDMAR--FDHPYISFLFYGTDTAG 305
VAYV+E+NL +PD + HP ++ T G
Sbjct: 104 EYVAYVSEQNL----EPDTSNEPVRHPRVAEALASDGTGG 139
>gi|452978188|gb|EME77952.1| hypothetical protein MYCFIDRAFT_33434 [Pseudocercospora fijiensis
CIRAD86]
Length = 597
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
A+++G HK +GY VI G + C W+E +V+ L +G QPFY + + +
Sbjct: 489 AYKIGHHFRHKRYGYEGVIIGWNMRCTAEQRWIEQMRVDDLPRGREQPFYNAVANDKS-- 546
Query: 267 NILVAYVAEENL 278
YVAEEN+
Sbjct: 547 ---TRYVAEENI 555
>gi|260427828|ref|ZP_05781807.1| hemimethylated DNA binding protein [Citreicella sp. SE45]
gi|260422320|gb|EEX15571.1| hemimethylated DNA binding protein [Citreicella sp. SE45]
Length = 114
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 53/105 (50%), Gaps = 9/105 (8%)
Query: 196 ATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPF 255
A +A R + LGQ V H+ +R V+ +DP + W E A E + QPF
Sbjct: 2 AQEVAMHTQRAKYHLGQVVRHRKHPFRGVVFDVDPEFSNTEEWYE-AIPEDSRPVRDQPF 60
Query: 256 YQVLVDVHADPNILVAYVAEENLLA--SDQPDMARFDHPYISFLF 298
Y +L + D + VAYV+E+NL+A S +P DHP I LF
Sbjct: 61 YHLLAE--NDQSFYVAYVSEQNLVADYSGEP----VDHPDIPDLF 99
>gi|337268949|ref|YP_004613004.1| hemimethylated DNA binding protein [Mesorhizobium opportunistum
WSM2075]
gi|336029259|gb|AEH88910.1| hemimethylated DNA binding protein [Mesorhizobium opportunistum
WSM2075]
Length = 111
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 8/115 (6%)
Query: 200 AFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVL 259
+ A+FA +GQ V H++F +R +I +DP + W E + ++ QPFY +L
Sbjct: 4 TMKTAKFA--IGQVVRHRLFPFRGIIFDVDPQFANTDEWYEAIPAD-VRPSKDQPFYHLL 60
Query: 260 VDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLR 314
+ +AYV+E+NLLA + R HP I +F G + P +Q R
Sbjct: 61 AE--NSETEYIAYVSEQNLLADQSGEPVR--HPQIKEMF-DKRPDGRYEPKRQSR 110
>gi|433775379|ref|YP_007305846.1| hemimethylated DNA binding domain protein [Mesorhizobium
australicum WSM2073]
gi|433667394|gb|AGB46470.1| hemimethylated DNA binding domain protein [Mesorhizobium
australicum WSM2073]
Length = 111
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 8/115 (6%)
Query: 200 AFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVL 259
A + A+FA +GQ V H++F +R +I +DP + W E + ++ QPFY +L
Sbjct: 4 AMKTAKFA--IGQVVRHRLFPFRGIIFDVDPQFANTDEWYEAIPAD-VRPRKDQPFYHLL 60
Query: 260 VDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLR 314
+ +AYV+E+NLL + R HP I +F G + P +Q R
Sbjct: 61 AE--NSETEYIAYVSEQNLLEDQSGEPVR--HPQIKEMF-DKKPDGRYAPKRQSR 110
>gi|126728549|ref|ZP_01744365.1| hypothetical protein SSE37_21202 [Sagittula stellata E-37]
gi|126711514|gb|EBA10564.1| hypothetical protein SSE37_21202 [Sagittula stellata E-37]
Length = 108
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 205 RFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHA 264
R + LGQ V H+ +R V+ +DP + W E + E+ + QPFY +L +
Sbjct: 5 RAKYHLGQVVRHRKHPFRGVVFDVDPEFNNTEEWYE-SIPEESRPAKKQPFYHLLAE--N 61
Query: 265 DPNILVAYVAEENLLA--SDQPDMARFDHPYISFLFYGTDTAGDF 307
D + VAYV+E+NL+A S +P DHP I LF G T G +
Sbjct: 62 DQSFYVAYVSEQNLIADYSGEP----VDHPDIPDLF-GAFTDGSY 101
>gi|163745447|ref|ZP_02152807.1| hypothetical protein OIHEL45_07650 [Oceanibulbus indolifex HEL-45]
gi|161382265|gb|EDQ06674.1| hypothetical protein OIHEL45_07650 [Oceanibulbus indolifex HEL-45]
Length = 108
Score = 53.9 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 38/96 (39%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 205 RFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHA 264
R + LGQ V HK +R VI +DP + W E A E+ + QPFY +L +
Sbjct: 5 RAKYHLGQIVRHKKHPFRGVIFDVDPEFANTEEWYE-AIPEESRPVKDQPFYHLLAE--N 61
Query: 265 DPNILVAYVAEENLLA--SDQPDMARFDHPYISFLF 298
D + VAYV+E+NL+A S +P DHP I LF
Sbjct: 62 DQSYYVAYVSEQNLVADYSGEP----VDHPDIPDLF 93
>gi|367476791|ref|ZP_09476166.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
gi|365270987|emb|CCD88634.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
Length = 110
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F++GQ V H++F +R VI +DP + W ++ E+++ QPFY +L + +AD
Sbjct: 9 FQIGQIVRHRVFSFRGVIFDIDPEFNNTEEWW-LSIPEEVRPHKDQPFYHLLAE-NADSE 66
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIP 309
VAYV+E+NL+ + + R H ++ +F D AG + P
Sbjct: 67 -YVAYVSEQNLVPDESGEPIR--HSQVAEIFI-KDKAGGYRP 104
>gi|361128081|gb|EHL00034.1| putative F-box only protein 21 [Glarea lozoyensis 74030]
Length = 630
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+++GQ H+ + Y AVI G D C + W+ V+ L +G +Q FY VLV+ +
Sbjct: 528 YKVGQVFRHRRYAYMAVIIGWDVECGMNPHWIASNGVDNLSRGRNQSFYHVLVE-----D 582
Query: 268 ILVAYVAEEN--LLASDQPD 285
+ YVAEEN +L +D+ D
Sbjct: 583 TSIRYVAEENIEILETDEVD 602
>gi|150396604|ref|YP_001327071.1| hemimethylated DNA binding protein [Sinorhizobium medicae WSM419]
gi|150028119|gb|ABR60236.1| hemimethylated DNA binding protein [Sinorhizobium medicae WSM419]
Length = 109
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 10/104 (9%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +GQ V H++F +R VI +DP + W A ++++ QPFY + + + +
Sbjct: 8 FEIGQVVRHRMFPFRGVIFDVDPEYANTDEWWN-AIPQEIRPEKDQPFYHLFAE--NEES 64
Query: 268 ILVAYVAEENLLA--SDQPDMARFDHPYISFLFYGTDTAGDFIP 309
VAYV+E+NL++ SD+P HP + LF D AG + P
Sbjct: 65 EYVAYVSEQNLVSDESDRP----VRHPQVDALFERAD-AGHYKP 103
>gi|255262310|ref|ZP_05341652.1| hemimethylated DNA binding protein [Thalassiobium sp. R2A62]
gi|255104645|gb|EET47319.1| hemimethylated DNA binding protein [Thalassiobium sp. R2A62]
Length = 108
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 204 ARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVH 263
R + LGQ V H+ +R V+ +DP + W E A E+ + QPFY +L +
Sbjct: 4 TRAKYYLGQVVRHRKHPFRGVVFDVDPTFSNTDDWYE-AIPEEARPAKDQPFYHLLAE-- 60
Query: 264 ADPNILVAYVAEENLLA--SDQPDMARFDHPYISFLF 298
D + VAYV+E+NL+A S +P DHP + LF
Sbjct: 61 NDQSYYVAYVSEQNLIADYSGEP----VDHPDLGDLF 93
>gi|254469367|ref|ZP_05082772.1| hemimethylated DNA binding protein [Pseudovibrio sp. JE062]
gi|211961202|gb|EEA96397.1| hemimethylated DNA binding protein [Pseudovibrio sp. JE062]
Length = 110
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 6/101 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
FR+GQ V H+++ +R ++ +DP + W E + E+ + QPFY +L + +A+
Sbjct: 9 FRIGQVVRHRLYPFRGIVFDVDPTFDNTEEWWE-SIPEEARPSKDQPFYHLLAE-NAESE 66
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFI 308
+AYV+E+NL D + R HP + F+ T GD+I
Sbjct: 67 -YIAYVSEQNLEKDDSGEPVR--HPQVE-EFFDETTDGDYI 103
>gi|374575599|ref|ZP_09648695.1| hemimethylated DNA binding domain protein [Bradyrhizobium sp.
WSM471]
gi|386395199|ref|ZP_10079977.1| hemimethylated DNA binding domain [Bradyrhizobium sp. WSM1253]
gi|374423920|gb|EHR03453.1| hemimethylated DNA binding domain protein [Bradyrhizobium sp.
WSM471]
gi|385735825|gb|EIG56021.1| hemimethylated DNA binding domain [Bradyrhizobium sp. WSM1253]
Length = 110
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F++GQ V H+IF +R VI +DP + W ++ E+++ QPFY +L + +
Sbjct: 9 FQIGQVVRHRIFSFRGVIFDIDPEFNNTEEWW-LSIPEEVRPHKDQPFYHLLAE--NSES 65
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAG 305
VAYV+E+NL+ D + R H ++ +F T G
Sbjct: 66 EYVAYVSEQNLVPDDSGEPVR--HSQVAEIFVKDKTGG 101
>gi|452838226|gb|EME40167.1| hypothetical protein DOTSEDRAFT_74857 [Dothistroma septosporum
NZE10]
Length = 596
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDV 262
A +++G HK + Y I G D C W+E +V+ L G SQPFY V+ +
Sbjct: 486 TAAVKYKIGNHFRHKRYEYEGFIVGWDMKCEAEDRWIEQMRVDHLPDGRSQPFYNVVAED 545
Query: 263 HADPNILVAYVAEENL-LASDQP 284
+ V YVA EN+ +A +QP
Sbjct: 546 ES-----VRYVAAENINIADEQP 563
>gi|390451299|ref|ZP_10236876.1| hemimethylated DNA binding protein [Nitratireductor aquibiodomus
RA22]
gi|389661206|gb|EIM72832.1| hemimethylated DNA binding protein [Nitratireductor aquibiodomus
RA22]
Length = 110
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
FR+GQ V H++F +R VI +DP + +W + A E+++ QPFY +L + +
Sbjct: 9 FRIGQVVRHRVFDFRGVIFDVDPEFNNTEAWYQ-AIPEEVRPRKDQPFYHLLAE--NEET 65
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGT 301
VAYV+E+NL+ + R HP ++ F T
Sbjct: 66 EYVAYVSEQNLMPDESGVPVR--HPQLAEFFVET 97
>gi|242814620|ref|XP_002486404.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218714743|gb|EED14166.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 578
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
E+ +R+GQ H+ + Y+AVI G D C + WM +++L+ G Q FY LV+
Sbjct: 464 EHQNVKYRVGQVFIHRRYEYQAVITGWDAECDANEEWMRRMGIDQLRAGRKQSFYHALVE 523
Query: 262 VHADPNILVAYVAEENL 278
+ + YVAEEN+
Sbjct: 524 DRS-----IRYVAEENI 535
>gi|196005633|ref|XP_002112683.1| hypothetical protein TRIADDRAFT_56958 [Trichoplax adhaerens]
gi|190584724|gb|EDV24793.1| hypothetical protein TRIADDRAFT_56958 [Trichoplax adhaerens]
Length = 210
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 190 ESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQ 249
E+ A S +R+GQ + H+ +GYR VI G DPV W++
Sbjct: 84 ENFAKSTIPRTPRPPHVRYRIGQVIRHRQWGYRGVIVGWDPVAKAPKEWLDHMHPADKPH 143
Query: 250 GPSQPFYQVLVDVHADPNILVAYVAEENL-LASDQPDMARFDHPYISFLFYGTDTAGDFI 308
+ Y VLVD YVAEEN+ + +++ + HP + F D + +I
Sbjct: 144 WRKKANYLVLVDTRDRLTPQSTYVAEENIEILTNR----KIIHPKVGDHFEEFDNSR-YI 198
Query: 309 PIKQLREKY 317
P LR+ Y
Sbjct: 199 PRPWLRKVY 207
>gi|427428158|ref|ZP_18918200.1| Hemimethylated DNA-binding region [Caenispirillum salinarum AK4]
gi|425882859|gb|EKV31538.1| Hemimethylated DNA-binding region [Caenispirillum salinarum AK4]
Length = 109
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 9/108 (8%)
Query: 205 RFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHA 264
R F +GQ V HK + YR ++ +DP +W A + Q +P+Y VLV
Sbjct: 9 RARFSIGQTVRHKSYRYRGIVVDVDPSFRMDDAWY--ADQTERQPPKDKPWYHVLV---- 62
Query: 265 DPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQ 312
D + YVAE NLLA D D DHP + F +D G + P+ +
Sbjct: 63 DQTEMSTYVAERNLLADDTDD--PIDHPDVEEWFNESD-EGLYTPLSR 107
>gi|169779842|ref|XP_001824385.1| F-box domain protein [Aspergillus oryzae RIB40]
gi|83773125|dbj|BAE63252.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391868745|gb|EIT77955.1| F-box domain protein [Aspergillus oryzae 3.042]
Length = 581
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+R+GQ H+ + Y A+I G D C WM +++LQ G Q FY V+V +
Sbjct: 473 YRIGQVFRHRRYNYIAIITGWDTECDAGEQWMRRMGIDRLQGGRHQSFYHVIVQDRS--- 529
Query: 268 ILVAYVAEENL 278
V YVAEEN+
Sbjct: 530 --VRYVAEENI 538
>gi|427793599|gb|JAA62251.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 660
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDV 262
+AR A+ +G + HK + Y VI G D C + W+ V L QPFY VLV+
Sbjct: 522 HARVAYAVGMIMRHKKYHYHCVIYGWDGKCAANRDWIFQMGVHNLSHEDRQPFYNVLVED 581
Query: 263 HADPNILVAYVAEENLLASDQPDMARFDHPYISFLF 298
++ Y A+ENL S P++ HP + F
Sbjct: 582 GSN-----RYAAQENLEISTSPEV--ITHPDVGKYF 610
>gi|254485913|ref|ZP_05099118.1| hypothetical protein RGAI101_569 [Roseobacter sp. GAI101]
gi|214042782|gb|EEB83420.1| hypothetical protein RGAI101_569 [Roseobacter sp. GAI101]
Length = 108
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/96 (38%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 205 RFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHA 264
R + LGQ V HK +R VI +DP + W E A E+ + QP+Y +L +
Sbjct: 5 RAKYHLGQVVRHKKHPFRGVIFDVDPEFANTDEWYE-AIPEESRPVKDQPYYHLLAE--N 61
Query: 265 DPNILVAYVAEENLLA--SDQPDMARFDHPYISFLF 298
D + VAYV+E+NL+A S +P DHP I LF
Sbjct: 62 DQSYYVAYVSEQNLVADYSGEP----VDHPDIPDLF 93
>gi|27379699|ref|NP_771228.1| hypothetical protein blr4588 [Bradyrhizobium japonicum USDA 110]
gi|27352851|dbj|BAC49853.1| blr4588 [Bradyrhizobium japonicum USDA 110]
Length = 110
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 6/102 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F++GQ V H+IF +R VI +DP + W ++ E+++ QPFY +L + +A+
Sbjct: 9 FQIGQVVRHRIFSFRGVIFDIDPEFNNTEEWW-LSIPEEVRPHKDQPFYHLLAE-NAESE 66
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIP 309
VAYV+E+NLL + + R H ++ +F D G + P
Sbjct: 67 -YVAYVSEQNLLPDESGEPIR--HSQVAEIFI-KDKGGGYRP 104
>gi|384218778|ref|YP_005609944.1| hypothetical protein BJ6T_50950 [Bradyrhizobium japonicum USDA 6]
gi|354957677|dbj|BAL10356.1| hypothetical protein BJ6T_50950 [Bradyrhizobium japonicum USDA 6]
Length = 110
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F++GQ V H+IF +R VI +DP + W ++ E+++ QPFY +L + +A+
Sbjct: 9 FQIGQVVRHRIFSFRGVIFDIDPEFNNTEEWW-LSIPEEVRPHKDQPFYHLLAE-NAESE 66
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAG 305
VAYV+E+NL+ D + R H ++ +F T G
Sbjct: 67 -YVAYVSEQNLVPDDSGEPIR--HSQVAEIFIKDKTGG 101
>gi|148255533|ref|YP_001240118.1| hypothetical protein BBta_4151 [Bradyrhizobium sp. BTAi1]
gi|146407706|gb|ABQ36212.1| hypothetical protein BBta_4151 [Bradyrhizobium sp. BTAi1]
Length = 110
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F++GQ V H++F +R VI +DP + W ++ E+++ QPFY +L + +A+
Sbjct: 9 FQIGQIVRHRVFSFRGVIFDIDPEFNNTEEWW-LSIPEEVRPHKDQPFYHLLAE-NAESE 66
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIP 309
VAYV+E+NL+ D + R H ++ +F D +G + P
Sbjct: 67 -YVAYVSEQNLVPDDSGEPIR--HSQVAEIFI-KDKSGGYRP 104
>gi|294055617|ref|YP_003549275.1| hemimethylated DNA binding protein [Coraliomargarita akajimensis
DSM 45221]
gi|293614950|gb|ADE55105.1| hemimethylated DNA binding protein [Coraliomargarita akajimensis
DSM 45221]
Length = 116
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 204 ARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVH 263
A + +G V HK++GYR V+ DP C ++W K Q QP+Y VLV
Sbjct: 14 APVLYEIGSVVTHKLYGYRGVVVAYDPQCMAGNTWY---MANKTQPPKDQPWYHVLVH-- 68
Query: 264 ADPNILVAYVAEENL 278
+ L YVA+ NL
Sbjct: 69 -ESGGLSTYVAQSNL 82
>gi|149185681|ref|ZP_01863997.1| Hemimethylated DNA-binding region protein [Erythrobacter sp. SD-21]
gi|148830901|gb|EDL49336.1| Hemimethylated DNA-binding region protein [Erythrobacter sp. SD-21]
Length = 126
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G V HK F +R VI +DPV S W + + E ++ +QPFY +L + +D +
Sbjct: 25 FAIGDVVRHKAFDFRGVIFDVDPVFANSEDWYQ-SIPEDIRPDRNQPFYHLLAE--SDES 81
Query: 268 ILVAYVAEENLL 279
VAYV+++NL+
Sbjct: 82 DYVAYVSQQNLV 93
>gi|393771312|ref|ZP_10359785.1| hemimethylated DNA-binding protein [Novosphingobium sp. Rr 2-17]
gi|392723383|gb|EIZ80775.1| hemimethylated DNA-binding protein [Novosphingobium sp. Rr 2-17]
Length = 126
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 204 ARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVH 263
ARFA +G V HK +R V+ +DPV W + E L+ QP+Y +L +
Sbjct: 23 ARFA--IGDVVKHKQHDFRGVVFDIDPVFANKEEWYQAIPAE-LRPLRDQPYYHLLAE-- 77
Query: 264 ADPNILVAYVAEENLLASDQPDMARFDHPYISFLFY 299
+ + VAYV++ENLLA + DHP +S LF+
Sbjct: 78 NEESSYVAYVSQENLLADGE--NGPVDHPSLSQLFH 111
>gi|359790955|ref|ZP_09293828.1| hypothetical protein MAXJ12_16011 [Mesorhizobium alhagi CCNWXJ12-2]
gi|359253069|gb|EHK56249.1| hypothetical protein MAXJ12_16011 [Mesorhizobium alhagi CCNWXJ12-2]
Length = 136
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +GQ V H++F +R VI +DP + W E E ++ QPFY +L + +A+
Sbjct: 35 FAIGQVVRHRLFPFRGVIYDVDPQFANTEEWYEAIPAE-VRPRKDQPFYHLLAE-NAETE 92
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQL 313
+AYV+E+NLL + R HP I +F T G + P L
Sbjct: 93 -YIAYVSEQNLLEDQSGEPVR--HPQIGEIFDKT-ADGRYRPKSHL 134
>gi|296284994|ref|ZP_06862992.1| hypothetical protein CbatJ_15310 [Citromicrobium bathyomarinum
JL354]
Length = 126
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G V HK+F +R V+ +DP S W E A E+++ QP+Y + + +D
Sbjct: 25 FGVGDVVRHKMFDFRGVVFDIDPTFANSEEWYE-AIPEQIRPERDQPYYHLFAE--SDDA 81
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLF 298
VAYV+++NL+ DHP I +F
Sbjct: 82 YYVAYVSQQNLVGDGT--GGPVDHPNIDEMF 110
>gi|85373540|ref|YP_457602.1| hypothetical protein ELI_03565 [Erythrobacter litoralis HTCC2594]
gi|84786623|gb|ABC62805.1| hypothetical protein ELI_03565 [Erythrobacter litoralis HTCC2594]
Length = 126
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDV 262
NARF +G V H++F +R VI +DPV S W E + ++++ QP+Y + +
Sbjct: 22 NARFG--IGDVVRHRMFDFRGVIFDIDPVFANSEEWYE-SIPQEIRPRRDQPYYHLFAE- 77
Query: 263 HADPNILVAYVAEENLLASDQPDMARFDHPYISFLF 298
+ + VAYV+++NL+A + +HP + LF
Sbjct: 78 -NEDSSYVAYVSQQNLVADSE--NGAVEHPQVPELF 110
>gi|378825959|ref|YP_005188691.1| Hemimethylated DNA-binding protein [Sinorhizobium fredii HH103]
gi|365179011|emb|CCE95866.1| Hemimethylated DNA-binding protein [Sinorhizobium fredii HH103]
Length = 109
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +GQ V H+ F +R VI +DP + W + ++++ QPFY + + D +
Sbjct: 8 FEIGQIVRHRFFPFRGVIFDVDPEYANTEEWWN-SIPQEIRPSKDQPFYHLFAE--NDES 64
Query: 268 ILVAYVAEENLLA--SDQP 284
VAYV+E+NL++ SDQP
Sbjct: 65 EYVAYVSEQNLVSDESDQP 83
>gi|119474627|ref|XP_001259189.1| F-box domain protein [Neosartorya fischeri NRRL 181]
gi|119407342|gb|EAW17292.1| F-box domain protein [Neosartorya fischeri NRRL 181]
Length = 581
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+R+GQ H+ + Y AVI G D C S WM +++L+ G Q FY L + +
Sbjct: 473 YRIGQVFRHRRYSYLAVITGWDTECDASEQWMRRMGIDRLEAGRHQSFYHALAEDKS--- 529
Query: 268 ILVAYVAEENL 278
V YVAEEN+
Sbjct: 530 --VRYVAEENV 538
>gi|399039371|ref|ZP_10734975.1| hemimethylated DNA binding domain-containing protein [Rhizobium sp.
CF122]
gi|398062659|gb|EJL54429.1| hemimethylated DNA binding domain-containing protein [Rhizobium sp.
CF122]
Length = 109
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 12/111 (10%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G+ V HK+F +R VI +DP + W E ++ QPFY +L + D N
Sbjct: 8 FSIGEVVRHKVFPFRGVIFDVDPEFANTEEWWNSIPAE-VRPSKDQPFYHLLAE--NDEN 64
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKYN 318
VAYV+E+NL+ + R + Y F D P Q + K N
Sbjct: 65 EYVAYVSEQNLVNDESGVPLRNEQVYQIF---------DMAPTGQFKPKMN 106
>gi|357023397|ref|ZP_09085598.1| hypothetical protein MEA186_01968 [Mesorhizobium amorphae
CCNWGS0123]
gi|355544683|gb|EHH13758.1| hypothetical protein MEA186_01968 [Mesorhizobium amorphae
CCNWGS0123]
Length = 107
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +GQ V H++F +R VI +DP + W E + ++ QPFY +L +
Sbjct: 6 FSIGQVVRHRLFPFRGVIFDVDPQFANTEEWYEAIPAD-VRPRKDQPFYHLLAE--NSET 62
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLR 314
+AYV+E+NLL + R HP I +F G + P +Q R
Sbjct: 63 EYIAYVSEQNLLEDQSGEPVR--HPQIREMF-DKRPDGRYQPKRQSR 106
>gi|110634049|ref|YP_674257.1| hemimethylated DNA binding protein [Chelativorans sp. BNC1]
gi|110285033|gb|ABG63092.1| hemimethylated DNA binding protein [Chelativorans sp. BNC1]
Length = 110
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +GQ V H++F +R VI +DP + W + E ++ QPFY +L + +
Sbjct: 9 FSIGQVVRHRLFPFRGVIFDIDPEFNNTEEWYQAIPAE-VRPSKDQPFYHLLAE--NEET 65
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIP 309
VAYV+E+NLL + + R HP + +F T G + P
Sbjct: 66 EYVAYVSEQNLLEDESGEPVR--HPQLFEMFIQTGD-GKYTP 104
>gi|114767091|ref|ZP_01445974.1| hypothetical protein 1100011001186_R2601_16715 [Pelagibaca
bermudensis HTCC2601]
gi|114540744|gb|EAU43810.1| hypothetical protein R2601_16715 [Roseovarius sp. HTCC2601]
Length = 108
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 205 RFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHA 264
R + LGQ V H+ +R V+ +DP + W E A E + QPFY +L +
Sbjct: 5 RAKYHLGQVVRHRKHPFRGVVFDVDPEFSNTEEWYE-AIPEDARPVKDQPFYHLLAE--N 61
Query: 265 DPNILVAYVAEENLLA--SDQPDMARFDHPYISFLF 298
D + VAYV+E+NL+A S +P DHP I LF
Sbjct: 62 DQSFYVAYVSEQNLVADYSGEP----VDHPDIPDLF 93
>gi|291223575|ref|XP_002731786.1| PREDICTED: F-box only protein 21-like [Saccoglossus kowalevskii]
Length = 596
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
+N F +G + HK++ Y VI G D +C W+ V L + QPFY VLV+
Sbjct: 473 DNNEVQFSVGMIMKHKLYSYVCVIYGWDSLCKMPEDWIIQMGVYNLPKKEKQPFYNVLVE 532
Query: 262 VHADPNILVAYVAEENLLASDQPDM 286
D Y A+ENL +++P M
Sbjct: 533 DGTD-----RYAAQENLELAEEPYM 552
>gi|334141172|ref|YP_004534378.1| hemimethylated DNA-binding protein [Novosphingobium sp. PP1Y]
gi|333939202|emb|CCA92560.1| hemimethylated DNA-binding region protein [Novosphingobium sp.
PP1Y]
Length = 126
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 204 ARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVH 263
ARFA +G V HK +R VI +DPV S W + +E L+ QP+Y +L +
Sbjct: 23 ARFA--IGDVVRHKQHDFRGVIFDIDPVFANSEEWYQSIPLE-LRPSREQPYYHLLAE-- 77
Query: 264 ADPNILVAYVAEENLLASDQPDMARFDHPYISFLF 298
+ + VAYV+++NLL + + DHP +S +F
Sbjct: 78 NEDSSYVAYVSQQNLL--EDAEGGPVDHPSVSEIF 110
>gi|398353533|ref|YP_006398997.1| hemimethylated DNA-binding region [Sinorhizobium fredii USDA 257]
gi|390128859|gb|AFL52240.1| hemimethylated DNA-binding region [Sinorhizobium fredii USDA 257]
Length = 109
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +GQ V H+ F +R VI +DP + W + ++++ QPFY + + D +
Sbjct: 8 FEIGQIVRHRFFPFRGVIFDVDPEYANTEEWWN-SIPQEIRPSKDQPFYHLFAE--NDES 64
Query: 268 ILVAYVAEENLLA--SDQP 284
VAYV+E+NL++ SDQP
Sbjct: 65 EYVAYVSEQNLVSDESDQP 83
>gi|307947125|ref|ZP_07662460.1| hemimethylated DNA binding protein [Roseibium sp. TrichSKD4]
gi|307770789|gb|EFO30015.1| hemimethylated DNA binding protein [Roseibium sp. TrichSKD4]
Length = 119
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +GQ V H+I+ +R VI +DP + W + A E ++ QPFY +L + D
Sbjct: 18 FNIGQVVRHRIYPFRGVIFDVDPTFSNTEEWWD-AIPEDVRPKRDQPFYHLLAE--NDET 74
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLF 298
VAYV+E+NL+ + R HP + +F
Sbjct: 75 EYVAYVSEQNLVLDMTGEPIR--HPQVEEIF 103
>gi|13470730|ref|NP_102299.1| hypothetical protein mlr0512 [Mesorhizobium loti MAFF303099]
gi|14021473|dbj|BAB48085.1| mlr0512 [Mesorhizobium loti MAFF303099]
Length = 174
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 8/115 (6%)
Query: 200 AFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVL 259
+ A+FA +GQ V H++F +R +I +DP + W E + ++ QPFY +L
Sbjct: 67 TMKTAKFA--IGQVVRHRLFPFRGIIFDVDPQFANTDEWYEAIPAD-VRPRKDQPFYHLL 123
Query: 260 VDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLR 314
+ +AYV+E+NLL + R HP I +F G + P +Q R
Sbjct: 124 AE--NSETEYIAYVSEQNLLEDRSGEPVR--HPQIKEMF-DKRPDGRYEPKRQSR 173
>gi|189200465|ref|XP_001936569.1| F-box domain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187983668|gb|EDU49156.1| F-box domain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 590
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 12/91 (13%)
Query: 188 EAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKL 247
+ +++ A + + F++GQ HK + Y VI G D C +S W++ +V+ L
Sbjct: 470 QVDAMRKPAITRSTRTNKVTFKVGQLFTHKRYRYEGVITGWDVACDQSEDWIQNMRVDNL 529
Query: 248 QQGPSQPFYQVLVDVHADPNILVAYVAEENL 278
G +Q FY VL YVA EN+
Sbjct: 530 PDGRNQAFYHVL------------YVAAENI 548
>gi|118589822|ref|ZP_01547226.1| hypothetical protein SIAM614_14195 [Stappia aggregata IAM 12614]
gi|118437319|gb|EAV43956.1| hypothetical protein SIAM614_14195 [Stappia aggregata IAM 12614]
Length = 107
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
FR+GQ V H+I+ +R VI +DP + W A E ++ QPFY +L + +
Sbjct: 6 FRIGQVVRHRIYPFRGVIFDVDPTFSNTEEWWN-AIPEDVRPLRDQPFYHLLAE--NEET 62
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIP 309
VAYV+E+NL A + R HP + +F T G ++P
Sbjct: 63 EYVAYVSEQNLEADMTGEPIR--HPQVEEIFE-EQTDGSYLP 101
>gi|399064997|ref|ZP_10747705.1| hemimethylated DNA binding domain containing protein
[Novosphingobium sp. AP12]
gi|398030202|gb|EJL23630.1| hemimethylated DNA binding domain containing protein
[Novosphingobium sp. AP12]
Length = 126
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 7/95 (7%)
Query: 204 ARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVH 263
ARFA +G V H++ +R V+ +DPV S W + E ++ QPFY +L +
Sbjct: 23 ARFA--IGDVVRHRLHDFRGVVFDIDPVFANSEEWYQSIPAE-VRPTREQPFYHLLAE-- 77
Query: 264 ADPNILVAYVAEENLLASDQPDMARFDHPYISFLF 298
+ + VAYV+++NL+ D DHP +S +F
Sbjct: 78 NEESSYVAYVSQQNLMGD--ADGGPVDHPSLSQMF 110
>gi|156546078|ref|XP_001601019.1| PREDICTED: F-box only protein 21-like [Nasonia vitripennis]
Length = 617
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G ++H+ +GY VI G D C + W+ VE+L G QPFY V + +
Sbjct: 501 FAIGMIMSHERYGYLCVITGWDLKCEATPEWINEMGVEELSGGRKQPFYNVFAEDGSS-- 558
Query: 268 ILVAYVAEENLLASDQP 284
Y A+ENL+ +D P
Sbjct: 559 ---RYAAQENLVMADSP 572
>gi|90419670|ref|ZP_01227580.1| putative Hemimethylated DNA-binding region [Aurantimonas
manganoxydans SI85-9A1]
gi|90336607|gb|EAS50348.1| putative Hemimethylated DNA-binding region [Aurantimonas
manganoxydans SI85-9A1]
Length = 107
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +GQ V H++F +R VI +DP S W E + ++ QPFY + + +A+ +
Sbjct: 6 FFIGQVVKHRVFPFRGVIFDVDPEFDNSDEWYESIPAD-VRPRKDQPFYHLFAE-NAE-S 62
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYG 300
+AYV+E+NLL + R HP IS LF G
Sbjct: 63 EYIAYVSEQNLLPDESGTPVR--HPQISELFDG 93
>gi|154253536|ref|YP_001414360.1| hemimethylated DNA-binding protein [Parvibaculum lavamentivorans
DS-1]
gi|154157486|gb|ABS64703.1| hemimethylated DNA binding protein [Parvibaculum lavamentivorans
DS-1]
Length = 110
Score = 52.0 bits (123), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
FR+GQ V H+ + +R VI +DP + W ++ E+++ QP+Y +L + ++D
Sbjct: 9 FRIGQIVRHRFYPFRGVIFDVDPTFNNTEEWW-LSIPEEVRPRKDQPYYHLLAE-NSDTE 66
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLF 298
VAYV+E+NLL + + R HP + LF
Sbjct: 67 -YVAYVSEQNLLPDETGEPVR--HPQVHELF 94
>gi|115403031|ref|XP_001217592.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114189438|gb|EAU31138.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 491
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+R+GQ H+ + Y +I G D C WM V++L G Q FY VLV+ +
Sbjct: 383 YRVGQVFRHRRYNYVGIIIGWDTECDAGEQWMRRMGVDRLAGGRHQSFYHVLVEDRS--- 439
Query: 268 ILVAYVAEENLL--ASDQPDMAR 288
V YVAEEN+ A DM R
Sbjct: 440 --VRYVAEENIWPTAPRLADMPR 460
>gi|361067221|gb|AEW07922.1| Pinus taeda anonymous locus 0_14675_01 genomic sequence
gi|383144419|gb|AFG53702.1| Pinus taeda anonymous locus 0_14675_01 genomic sequence
gi|383144421|gb|AFG53703.1| Pinus taeda anonymous locus 0_14675_01 genomic sequence
gi|383144423|gb|AFG53704.1| Pinus taeda anonymous locus 0_14675_01 genomic sequence
gi|383144425|gb|AFG53705.1| Pinus taeda anonymous locus 0_14675_01 genomic sequence
gi|383144427|gb|AFG53706.1| Pinus taeda anonymous locus 0_14675_01 genomic sequence
gi|383144429|gb|AFG53707.1| Pinus taeda anonymous locus 0_14675_01 genomic sequence
gi|383144431|gb|AFG53708.1| Pinus taeda anonymous locus 0_14675_01 genomic sequence
gi|383144435|gb|AFG53710.1| Pinus taeda anonymous locus 0_14675_01 genomic sequence
gi|383144437|gb|AFG53711.1| Pinus taeda anonymous locus 0_14675_01 genomic sequence
gi|383144439|gb|AFG53712.1| Pinus taeda anonymous locus 0_14675_01 genomic sequence
gi|383144443|gb|AFG53714.1| Pinus taeda anonymous locus 0_14675_01 genomic sequence
gi|383144445|gb|AFG53715.1| Pinus taeda anonymous locus 0_14675_01 genomic sequence
gi|383144449|gb|AFG53717.1| Pinus taeda anonymous locus 0_14675_01 genomic sequence
Length = 40
Score = 52.0 bits (123), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/26 (84%), Positives = 23/26 (88%)
Query: 300 GTDTAGDFIPIKQLREKYNRPRYEVP 325
G D AGDFIPIKQLREKYNR R+EVP
Sbjct: 1 GMDAAGDFIPIKQLREKYNRLRHEVP 26
>gi|297182580|gb|ADI18740.1| uncharacterized conserved protein [uncultured Rhizobiales bacterium
HF4000_32B18]
Length = 104
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +GQ V H++F Y VI +D V E+ +W + E + QPFY+V VD +
Sbjct: 9 FNIGQAVRHRVFDYAGVIVDIDAVFGETDAWYQAIPAEN-RPNRDQPFYRVRVDYEGVES 67
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFL 297
VAYV+E+NL+ D D P FL
Sbjct: 68 --VAYVSEQNLVC----DAFGLDTPAREFL 91
>gi|346993101|ref|ZP_08861173.1| hypothetical protein RTW15_09346 [Ruegeria sp. TW15]
Length = 108
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+RLGQ V HK +R VI +DP S W + A E + QPFY +L + D +
Sbjct: 8 YRLGQVVRHKRHPFRGVIFDVDPEFSNSEEWYQ-AIPEDSRPLKDQPFYHLLAE--NDQS 64
Query: 268 ILVAYVAEENLL--ASDQPDMARFDHPYISFLF 298
VAYV+E+NL+ S +P DHP I +F
Sbjct: 65 FYVAYVSEQNLIEDQSGEP----VDHPDIPNMF 93
>gi|182679155|ref|YP_001833301.1| hemimethylated DNA binding protein [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182635038|gb|ACB95812.1| hemimethylated DNA binding protein [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 109
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +GQ V H+ + +R VI +DPV + W + A E+++ QPFY + + +A+
Sbjct: 8 FGIGQVVRHRKYPFRGVIYDVDPVFANTEEWWQ-AIPEEVRPNKDQPFYHLFAE-NAETE 65
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLF 298
VAYV+E+NLL D R HP + +F
Sbjct: 66 -YVAYVSEQNLLLDTSGDPLR--HPQVEEVF 93
>gi|255600173|ref|XP_002537402.1| conserved hypothetical protein [Ricinus communis]
gi|223516486|gb|EEF24982.1| conserved hypothetical protein [Ricinus communis]
Length = 115
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G+ V HK+F +R VI +DP + W E ++ QPFY +L + D N
Sbjct: 14 FGIGEVVRHKVFPFRGVIFDVDPEFANTEEWWNSIPAE-VRPSKDQPFYHLLAE--NDEN 70
Query: 268 ILVAYVAEENLL 279
VAYV+E+NL+
Sbjct: 71 EYVAYVSEQNLV 82
>gi|310817200|ref|YP_003965164.1| Heat shock protein hspQ [Ketogulonicigenium vulgare Y25]
gi|308755935|gb|ADO43864.1| Heat shock protein hspQ [Ketogulonicigenium vulgare Y25]
Length = 108
Score = 51.6 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
+ R F LGQ V H++ +R V+ +DP S W + + E ++ QPFY +L +
Sbjct: 2 QTRRAKFHLGQIVRHRVHQFRGVVFDVDPEFANSEGWYQ-SIPEDIRPRKDQPFYHLLAE 60
Query: 262 VHADPNILVAYVAEENLLASDQPDMARFDHPYISFLF 298
+ + VAYV+E+NL+ P DHP + +F
Sbjct: 61 --SAESYYVAYVSEQNLVLD--PTGDPVDHPDVPNMF 93
>gi|259417550|ref|ZP_05741469.1| hemimethylated DNA-binding region [Silicibacter sp. TrichCH4B]
gi|259346456|gb|EEW58270.1| hemimethylated DNA-binding region [Silicibacter sp. TrichCH4B]
Length = 108
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 204 ARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVH 263
R + LGQ V H+ +R V+ +DP + W E A E+ + QP+Y +L +
Sbjct: 4 TRAKYNLGQVVRHRKHPFRGVVFDVDPEFANTEEWYE-AIPEESRPAKEQPYYHLLAE-- 60
Query: 264 ADPNILVAYVAEENLLA--SDQPDMARFDHPYISFLFYGTD 302
D VAYV+E+NL+A S +P HP + +F G D
Sbjct: 61 NDQTYYVAYVSEQNLVADYSGEP----VSHPDLHEMFTGFD 97
>gi|169617884|ref|XP_001802356.1| hypothetical protein SNOG_12123 [Phaeosphaeria nodorum SN15]
gi|111059415|gb|EAT80535.1| hypothetical protein SNOG_12123 [Phaeosphaeria nodorum SN15]
Length = 596
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDV 262
A F++GQ H+ + Y ++ G D C W++ V+ L +G +Q FY VLV
Sbjct: 484 TANVKFKIGQLFQHRRYHYEGIVTGWDVSCDAGEEWIQNMDVDHLPKGRNQAFYHVLV-- 541
Query: 263 HADPNILVAYVAEENL 278
D + V YVAEEN+
Sbjct: 542 -CDKS--VRYVAEENI 554
>gi|383144417|gb|AFG53701.1| Pinus taeda anonymous locus 0_14675_01 genomic sequence
gi|383144433|gb|AFG53709.1| Pinus taeda anonymous locus 0_14675_01 genomic sequence
gi|383144441|gb|AFG53713.1| Pinus taeda anonymous locus 0_14675_01 genomic sequence
Length = 40
Score = 51.2 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/28 (78%), Positives = 24/28 (85%)
Query: 300 GTDTAGDFIPIKQLREKYNRPRYEVPTD 327
G D AGDFIPIKQLREKYNR R+EVP +
Sbjct: 1 GMDAAGDFIPIKQLREKYNRLRHEVPRE 28
>gi|146340725|ref|YP_001205773.1| hypothetical protein BRADO3778 [Bradyrhizobium sp. ORS 278]
gi|365878410|ref|ZP_09417887.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
gi|365891889|ref|ZP_09430250.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
gi|146193531|emb|CAL77548.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
gi|365293726|emb|CCD90418.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
gi|365332098|emb|CCE02781.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
Length = 110
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F++GQ V H++F +R VI +DP + W ++ E+++ QPFY +L + +A+
Sbjct: 9 FQIGQIVRHRVFSFRGVIFDIDPEFNNTEEWW-LSIPEEVRPHKDQPFYHLLAE-NAESE 66
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIP 309
VAYV+E+NL+ + + R H ++ +F D +G + P
Sbjct: 67 -YVAYVSEQNLVPDESGEPIR--HSQVAEIFI-KDKSGGYRP 104
>gi|260789582|ref|XP_002589825.1| hypothetical protein BRAFLDRAFT_90535 [Branchiostoma floridae]
gi|229275008|gb|EEN45836.1| hypothetical protein BRAFLDRAFT_90535 [Branchiostoma floridae]
Length = 226
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 36/87 (41%)
Query: 192 LAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGP 251
A S +R+GQ + HK +GYR VI G D + +W+
Sbjct: 102 FAGSTVPRRPRPVHVKYRVGQTIRHKRYGYRGVIIGWDVIAKAPPNWLLANHPADKPYWK 161
Query: 252 SQPFYQVLVDVHADPNILVAYVAEENL 278
P Y VLVD P+ YV EEN+
Sbjct: 162 KTPNYSVLVDERDRPDGQRTYVVEENI 188
>gi|383144447|gb|AFG53716.1| Pinus taeda anonymous locus 0_14675_01 genomic sequence
Length = 40
Score = 51.2 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/26 (84%), Positives = 23/26 (88%)
Query: 300 GTDTAGDFIPIKQLREKYNRPRYEVP 325
G D AGDFIPIKQLREKYNR R+EVP
Sbjct: 1 GMDAAGDFIPIKQLREKYNRLRHEVP 26
>gi|294678841|ref|YP_003579456.1| hemimethylated DNA-binding protein family [Rhodobacter capsulatus
SB 1003]
gi|294477661|gb|ADE87049.1| hemimethylated DNA-binding protein family [Rhodobacter capsulatus
SB 1003]
Length = 108
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 15/102 (14%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+ +GQ V H+ +R V+ +D + + +W E A E+ + QPFY +L + D
Sbjct: 8 YHIGQIVRHRKHPFRGVVFDVDAMFSNTDAWYE-AIPEESRPAKDQPFYHLLAE--NDQT 64
Query: 268 ILVAYVAEENLLA--SDQPDMARFDHPYISFLFYGTDTAGDF 307
VAYV+E+NLL S +P DHP +S LF GDF
Sbjct: 65 YYVAYVSEQNLLPDNSGEP----IDHPDLSDLF------GDF 96
>gi|84500690|ref|ZP_00998939.1| hypothetical protein OB2597_12046 [Oceanicola batsensis HTCC2597]
gi|84391643|gb|EAQ03975.1| hypothetical protein OB2597_12046 [Oceanicola batsensis HTCC2597]
Length = 108
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 204 ARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVH 263
R + LGQ V HK +R V+ +DP + W + A E + QPFY +L +
Sbjct: 4 TRAKYHLGQVVRHKKHPFRGVVFDVDPEFSNTEEWYD-AIPEDSRPEREQPFYHLLAE-- 60
Query: 264 ADPNILVAYVAEENLLA--SDQPDMARFDHPYISFLF 298
D + VAYV+E+NL+A S +P DHP I LF
Sbjct: 61 NDQSYYVAYVSEQNLVADYSGEP----VDHPDIPDLF 93
>gi|456355371|dbj|BAM89816.1| hypothetical protein S58_38260 [Agromonas oligotrophica S58]
Length = 110
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F++GQ V H++F +R VI +DP + W ++ E+++ QPFY +L + +A+
Sbjct: 9 FQIGQIVRHRVFSFRGVIFDIDPEFNNTEEWW-LSIPEEVRPHKDQPFYHLLAE-NAESE 66
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIP 309
VAYV+E+NL+ + + R H ++ +F D +G + P
Sbjct: 67 -YVAYVSEQNLVPDESGEPIR--HSQVAEIFI-KDKSGGYRP 104
>gi|220926920|ref|YP_002502222.1| hemimethylated DNA binding protein [Methylobacterium nodulans ORS
2060]
gi|219951527|gb|ACL61919.1| hemimethylated DNA binding protein [Methylobacterium nodulans ORS
2060]
Length = 157
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 178 ADLRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSS 237
ADL L A S +A A+F +G V H+I+ +R +I +DPV +
Sbjct: 28 ADL-PATSPLPAMSPHPDPGPVAIRRAKF--NIGAVVRHRIYPFRGIIFDVDPVFSNTEE 84
Query: 238 WMEIAQVEKLQQGPSQPFYQVLVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFL 297
W +A E+++ QPFY +L + VAYV+E+NL+ + R H I L
Sbjct: 85 WW-LAIPEEVRPSKDQPFYHLLAENQE--TEYVAYVSEQNLVPDTSGEALR--HARIPEL 139
Query: 298 FYGTDTAGDF 307
F G +
Sbjct: 140 FVHDAATGTY 149
>gi|153010957|ref|YP_001372171.1| hemimethylated DNA binding protein [Ochrobactrum anthropi ATCC
49188]
gi|404317892|ref|ZP_10965825.1| hemimethylated DNA binding protein [Ochrobactrum anthropi CTS-325]
gi|151562845|gb|ABS16342.1| hemimethylated DNA binding protein [Ochrobactrum anthropi ATCC
49188]
Length = 112
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F++GQ V H++F +R VI +DP + W E + E+ + QPFY +L + +A+ +
Sbjct: 11 FQIGQVVKHRLFPFRGVIFDVDPEFANTEEWYE-SIPEEARPHRDQPFYHLLAE-NAE-S 67
Query: 268 ILVAYVAEENLLASDQPDMA--RFDHPYISFLFYGTDTA 304
VAYV+E+NL+ PD++ HP I +F D
Sbjct: 68 EYVAYVSEQNLV----PDLSGEPLRHPQIEEMFDRQDNG 102
>gi|300023175|ref|YP_003755786.1| hemimethylated DNA binding protein [Hyphomicrobium denitrificans
ATCC 51888]
gi|299524996|gb|ADJ23465.1| hemimethylated DNA binding protein [Hyphomicrobium denitrificans
ATCC 51888]
Length = 110
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 200 AFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVL 259
+ +A+FA +GQ V H+I+ +R +I +DP + W ++ E ++ QPFY +
Sbjct: 3 SIRHAKFA--IGQVVRHRIYPFRGLIFDIDPEFANTEEWW-LSIPEDVRPRKDQPFYHLY 59
Query: 260 VDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDF 307
+ D +AYV+E+NLL + A HP IS F +D G +
Sbjct: 60 AE--NDETTYLAYVSEQNLLLDET--SAPLRHPDISDRFI-SDAGGTY 102
>gi|239833938|ref|ZP_04682266.1| hemimethylated DNA binding domain-containing protein [Ochrobactrum
intermedium LMG 3301]
gi|444309985|ref|ZP_21145613.1| hemimethylated DNA binding protein [Ochrobactrum intermedium M86]
gi|239822001|gb|EEQ93570.1| hemimethylated DNA binding domain-containing protein [Ochrobactrum
intermedium LMG 3301]
gi|443486632|gb|ELT49406.1| hemimethylated DNA binding protein [Ochrobactrum intermedium M86]
Length = 112
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 9/93 (9%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F++GQ V H++F +R VI +DP + W E + E+ + QPFY +L + +A+ +
Sbjct: 11 FQIGQVVKHRLFPFRGVIFDVDPEFANTEEWYE-SIPEEARPHRDQPFYHLLAE-NAE-S 67
Query: 268 ILVAYVAEENLLASDQPDMA--RFDHPYISFLF 298
VAYV+E+NL+ PD++ HP I +F
Sbjct: 68 EYVAYVSEQNLV----PDLSGEPLRHPQIEEMF 96
>gi|222148741|ref|YP_002549698.1| hypothetical protein Avi_2374 [Agrobacterium vitis S4]
gi|221735727|gb|ACM36690.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 125
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Query: 192 LAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGP 251
L A+ NA+F +G V HK+F +R V+ +DP + W E L+
Sbjct: 10 LTKGNKAMKQRNAKFG--IGDIVRHKVFPFRGVVFDVDPEFANTEEWWNAIPAE-LRPSK 66
Query: 252 SQPFYQVLVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIP 309
QPFY +L + +A+ VAYV+E+NL + + R +P+I+ +F + AG + P
Sbjct: 67 DQPFYHLLAE-NAETE-YVAYVSEQNLETDESGEPLR--NPHINQIFV-EEQAGHYKP 119
>gi|409437386|ref|ZP_11264500.1| conserved hypothetical protein [Rhizobium mesoamericanum STM3625]
gi|408750814|emb|CCM75656.1| conserved hypothetical protein [Rhizobium mesoamericanum STM3625]
Length = 109
Score = 50.8 bits (120), Expect = 9e-04, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 12/109 (11%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G+ V HK+F +R VI +DP + W E ++ QPFY +L + D N
Sbjct: 8 FSIGEVVRHKVFPFRGVIFDVDPEFANTEEWWNSIPAE-VRPSKDQPFYHLLAE--NDEN 64
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREK 316
VAYV+E+NL+ + R + Y F D P Q + K
Sbjct: 65 EYVAYVSEQNLINDESGVPLRNEQVYQIF---------DMAPTGQFKPK 104
>gi|393765280|ref|ZP_10353865.1| hemimethylated DNA binding protein [Methylobacterium sp. GXF4]
gi|392729279|gb|EIZ86559.1| hemimethylated DNA binding protein [Methylobacterium sp. GXF4]
Length = 112
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 60/111 (54%), Gaps = 8/111 (7%)
Query: 197 TALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFY 256
T + A+FA +G V H+I+ +R ++ +DPV + W +A E+++ QPFY
Sbjct: 2 TDVTLRTAKFA--IGAVVRHRIYPFRGIVFDVDPVFDNTEEWW-LAIPEEVRPRKDQPFY 58
Query: 257 QVLVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDF 307
+L + +A+ VAYV+E+NLL + R H I+ +F D AG +
Sbjct: 59 HLLAE-NAETE-YVAYVSEQNLLPDTSGEALR--HAGIAEMF-ERDAAGGY 104
>gi|320168803|gb|EFW45702.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 198
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 53/116 (45%), Gaps = 9/116 (7%)
Query: 199 LAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQV 258
L +N A +G V HK G RAVI DP C W ++ +++L G +QPFY
Sbjct: 76 LPRDNPAQAIDVGSFVFHKSSGVRAVIVRSDPQCKRRELWCQLNGIDRLTHGRNQPFYLA 135
Query: 259 LVDVH-ADPNIL-VAYVAEENLL--ASDQPDMARFDHPYISFLFYGTDTA-GDFIP 309
L D P L YV E+++ AS+ P HP F+ D+ G IP
Sbjct: 136 LPDARDCSPQELSFIYVPHESVIPFASNTP----IQHPLAPFVIKSFDSVLGRCIP 187
>gi|449550956|gb|EMD41920.1| hypothetical protein CERSUDRAFT_110478 [Ceriporiopsis subvermispora
B]
Length = 620
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 180 LRDQICKLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWM 239
L +Q +E + + T + A +G H +GY I G +P C S W
Sbjct: 450 LEEQAGDIEKQDEQRAQTKYRRSEHKVAHFVGLVFKHARYGYTGCITGWEPKCAASVEWQ 509
Query: 240 EIAQVEKLQQGPSQPFYQVL-VDVHADPNILVAYVAEENLL 279
+V KL +G QPFY V+ +D H YVAEEN++
Sbjct: 510 AQMEVFKLPRGAKQPFYTVIAMDGHKR------YVAEENII 544
>gi|319783565|ref|YP_004143041.1| hemimethylated DNA binding protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317169453|gb|ADV12991.1| hemimethylated DNA binding protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 111
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 200 AFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVL 259
+ A+FA +GQ V H++F +R +I +DP + W E + ++ QPFY +L
Sbjct: 4 TMKTAKFA--IGQVVRHRLFPFRGIIFDVDPQFANTDEWYEAIPAD-VRPRKDQPFYHLL 60
Query: 260 VDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLF 298
+ +AYV+E+NLL + R HP I +F
Sbjct: 61 AE--NSETEYIAYVSEQNLLEDQSGEPVR--HPQIKEMF 95
>gi|83941767|ref|ZP_00954229.1| hypothetical protein EE36_06023 [Sulfitobacter sp. EE-36]
gi|83847587|gb|EAP85462.1| hypothetical protein EE36_06023 [Sulfitobacter sp. EE-36]
Length = 108
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 205 RFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHA 264
R + LGQ V HK +R VI +DP + W E A E + QP+Y +L +
Sbjct: 5 RAKYHLGQIVRHKKHPFRGVIFDVDPEFANTEEWYE-AIPEDSRPEKDQPYYHLLAE--N 61
Query: 265 DPNILVAYVAEENLLA--SDQPDMARFDHPYISFLF 298
+ + VAYV+E+NL+A S +P DHP I LF
Sbjct: 62 EQSYYVAYVSEQNLVADYSGEP----VDHPDIPDLF 93
>gi|339505364|ref|YP_004692784.1| hemimethylated DNA-binding protein [Roseobacter litoralis Och 149]
gi|338759357|gb|AEI95821.1| hemimethylated DNA-binding protein, YccV like protein [Roseobacter
litoralis Och 149]
Length = 108
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 205 RFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHA 264
R + LGQ V HK +R VI +DP + W E A E + QP+Y +L +
Sbjct: 5 RAKYHLGQIVRHKKHPFRGVIFDVDPEFSNTEEWYE-AIPEDSRPVKEQPYYHLLAE--N 61
Query: 265 DPNILVAYVAEENLLA--SDQPDMARFDHPYISFLF 298
+ + VAYV+E+NL+A S +P DHP I LF
Sbjct: 62 EQSYYVAYVSEQNLIADYSGEP----VDHPDIPDLF 93
>gi|110677448|ref|YP_680455.1| hypothetical protein RD1_0029 [Roseobacter denitrificans OCh 114]
gi|109453564|gb|ABG29769.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
Length = 108
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 205 RFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHA 264
R + LGQ V HK +R VI +DP + W E A E + QP+Y +L +
Sbjct: 5 RAKYHLGQIVRHKKHPFRGVIFDVDPEFSNTEEWYE-AIPEDSRPVKEQPYYHLLAE--N 61
Query: 265 DPNILVAYVAEENLLA--SDQPDMARFDHPYISFLF 298
+ + VAYV+E+NL+A S +P DHP I LF
Sbjct: 62 EQSYYVAYVSEQNLIADYSGEP----VDHPDIPDLF 93
>gi|149915480|ref|ZP_01904007.1| hypothetical protein RAZWK3B_05677 [Roseobacter sp. AzwK-3b]
gi|149810769|gb|EDM70610.1| hypothetical protein RAZWK3B_05677 [Roseobacter sp. AzwK-3b]
Length = 108
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 204 ARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVH 263
AR + LGQ V HK +R V+ +DP + W A E + QPFY +L +
Sbjct: 4 ARAKYSLGQVVRHKKHPFRGVVFDVDPEFANTEEWYH-AIPEDSRPSRQQPFYHLLAE-- 60
Query: 264 ADPNILVAYVAEENLLA--SDQPDMARFDHPYISFLF 298
+ + VAYV+E+NL+A S +P DHP I LF
Sbjct: 61 NEQSYYVAYVSEQNLVADYSGEP----VDHPDIPDLF 93
>gi|406706995|ref|YP_006757348.1| Hemimethylated DNA-binding protein YccV like protein [alpha
proteobacterium HIMB5]
gi|406652771|gb|AFS48171.1| Hemimethylated DNA-binding protein YccV like protein [alpha
proteobacterium HIMB5]
Length = 106
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Query: 199 LAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQV 258
+A + A+F+ +G+ V HK F +R VI +D S W + + + ++ QPFY +
Sbjct: 1 MAIQKAKFS--IGEIVKHKHFDFRGVIYDVDFEFNNSEEWYQ-SIPKNVRPRKDQPFYHL 57
Query: 259 LVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDF 307
L + D AYV+E+NLL D + + HP I +F G AG F
Sbjct: 58 LAE--NDEITYEAYVSEQNLLVDDSDEPIK--HPLIEEIFSGKKGAGYF 102
>gi|384251853|gb|EIE25330.1| hypothetical protein COCSUDRAFT_61552 [Coccomyxa subellipsoidea
C-169]
Length = 238
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 56/123 (45%), Gaps = 15/123 (12%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
+ +R AF LG HK FGY+ V+ G D C +W + P+QPFY VL D
Sbjct: 74 DRSRVAFSLGTVFIHKKFGYKGVVYGWDQECERDPAWAAAVHAD-----PTQPFYHVLPD 128
Query: 262 VHADPNILVA-----YVAEENLLASDQPDMARFDHPYISFLF--YGTDTAGDFIPIKQLR 314
I A YVA++N+ P R +H I+ F Y D ++P +L+
Sbjct: 129 EDDCQRIFGAVRISKYVAQDNMEPLLVP--HRVNHRAIAHYFDSYSPDLLR-YVPNSRLQ 185
Query: 315 EKY 317
+Y
Sbjct: 186 YEY 188
>gi|170744359|ref|YP_001773014.1| hemimethylated DNA binding protein [Methylobacterium sp. 4-46]
gi|168198633|gb|ACA20580.1| hemimethylated DNA binding protein [Methylobacterium sp. 4-46]
Length = 115
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Query: 205 RFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHA 264
R F +G V H+I+ +R +I +DPV + W +A E+++ QPFY +L +
Sbjct: 10 RAKFNIGAVVRHRIYPFRGIIFDVDPVFNNTEEWW-LAIPEEVRPAKDQPFYHLLAENQD 68
Query: 265 DPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDF 307
VAYV+E+NL+ + R H I LF G +
Sbjct: 69 --TEYVAYVSEQNLVPDTSGEALR--HARIPDLFVHDAATGTY 107
>gi|402218117|gb|EJT98195.1| hypothetical protein DACRYDRAFT_118922 [Dacryopinax sp. DJM-731
SS1]
Length = 700
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 49/116 (42%), Gaps = 13/116 (11%)
Query: 177 AADLRDQICKL----EAESLAASATA----LAFENARFAFRLGQKVNHKIFGYRAVICGM 228
A +RDQ+ + E L A A LA + F +G + H F Y VI
Sbjct: 471 AVQVRDQLIHMYELQETNELQAKRDADSMPLAVDGTNVEFHVGTLMRHAKFAYIGVIADW 530
Query: 229 DPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPNILVAYVAEENLLASDQP 284
+ C + WM V+ L +G +QPFY V + V YVAEEN+ P
Sbjct: 531 NTKCHQPEQWMREMGVDMLSRGRNQPFYTVFA-----MDGTVRYVAEENVEVHTLP 581
>gi|190891746|ref|YP_001978288.1| hypothetical protein RHECIAT_CH0002152 [Rhizobium etli CIAT 652]
gi|218507615|ref|ZP_03505493.1| hypothetical protein RetlB5_08375 [Rhizobium etli Brasil 5]
gi|417097316|ref|ZP_11959123.1| hypothetical protein RHECNPAF_169001 [Rhizobium etli CNPAF512]
gi|190697025|gb|ACE91110.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
gi|327193320|gb|EGE60224.1| hypothetical protein RHECNPAF_169001 [Rhizobium etli CNPAF512]
Length = 109
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G+ V HK+F +R VI +DP + W E ++ QPFY +L + D +
Sbjct: 8 FSIGEVVRHKVFPFRGVIFDVDPEFANTEEWWNSIPAE-VRPSKDQPFYHLLAE--NDES 64
Query: 268 ILVAYVAEENLL 279
VAYV+E+NL+
Sbjct: 65 EYVAYVSEQNLV 76
>gi|218461386|ref|ZP_03501477.1| hypothetical protein RetlK5_18627 [Rhizobium etli Kim 5]
gi|218660052|ref|ZP_03515982.1| hypothetical protein RetlI_10617 [Rhizobium etli IE4771]
Length = 109
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G+ V HK+F +R VI +DP + W E ++ QPFY +L + D +
Sbjct: 8 FSIGEVVRHKVFPFRGVIFDVDPEFANTEEWWNSIPAE-VRPSKDQPFYHLLAE--NDES 64
Query: 268 ILVAYVAEENLL 279
VAYV+E+NL+
Sbjct: 65 EYVAYVSEQNLV 76
>gi|77164386|ref|YP_342911.1| hemimethylated DNA-binding region [Nitrosococcus oceani ATCC 19707]
gi|254434807|ref|ZP_05048315.1| hypothetical protein NOC27_1738 [Nitrosococcus oceani AFC27]
gi|76882700|gb|ABA57381.1| Hemimethylated DNA-binding region [Nitrosococcus oceani ATCC 19707]
gi|207091140|gb|EDZ68411.1| hypothetical protein NOC27_1738 [Nitrosococcus oceani AFC27]
Length = 105
Score = 50.1 bits (118), Expect = 0.002, Method: Composition-based stats.
Identities = 37/99 (37%), Positives = 47/99 (47%), Gaps = 12/99 (12%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
E A+ F +GQ V HK+F YR V+ DP S W E + Q +P+Y VLV+
Sbjct: 2 EQAKAKFTIGQIVRHKLFHYRGVVVDADPSFQGSPEWYE--HMACSQPPKDRPWYHVLVN 59
Query: 262 VHADPNILVAYVAEEN--LLASDQPDMARFDHPYISFLF 298
AD YVAE N L S QP +HP + F
Sbjct: 60 -DADYE---TYVAERNLDLDGSGQP----INHPAVEMFF 90
>gi|56459822|ref|YP_155103.1| hypothetical protein IL0713 [Idiomarina loihiensis L2TR]
gi|56178832|gb|AAV81554.1| Uncharacterized conserved protein [Idiomarina loihiensis L2TR]
Length = 103
Score = 50.1 bits (118), Expect = 0.002, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +GQ + H ++GYR VI DP S SW K QP+Y +LV+ +
Sbjct: 6 FSIGQLITHSLYGYRGVIIDADPCFTLSDSWYNKMATSK--PAKDQPWYHILVNNSS--- 60
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTA 304
+ YV+E +L A D + A HP + LF G +
Sbjct: 61 -IQTYVSESSLEA-DFSEQA-IQHPMVDLLFSGKSAS 94
>gi|312084396|ref|XP_003144259.1| hemimethylated DNA binding domain-containing protein [Loa loa]
Length = 194
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+R+G V HKI GYR VI G D SW++ + ++ P Y V++D
Sbjct: 88 YRVGDVVRHKIHGYRGVIIGWDEKAVAPQSWLDKTHKGR-KEWSEMPNYSVIIDTRDRLI 146
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTD 302
+AYV EEN+ + R HP I F D
Sbjct: 147 PQLAYVVEENIELGE----GRIFHPLIKNYFEAFD 177
>gi|407793283|ref|ZP_11140317.1| hypothetical protein A10D4_04015 [Idiomarina xiamenensis 10-D-4]
gi|407214906|gb|EKE84747.1| hypothetical protein A10D4_04015 [Idiomarina xiamenensis 10-D-4]
Length = 103
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F LGQ V H+++GYR VI +D S W + + + QP+Y +LV+ +
Sbjct: 6 FALGQLVVHELYGYRGVIVDVDACFSLSDDWYQRMALSR--PAKQQPWYLLLVNNSS--- 60
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLF 298
L YVAE++LLA +P + HP ++ L
Sbjct: 61 -LQTYVAEQHLLAESEPK--QISHPLLNSLL 88
>gi|116252143|ref|YP_767981.1| hypothetical protein RL2391 [Rhizobium leguminosarum bv. viciae
3841]
gi|209549331|ref|YP_002281248.1| hemimethylated DNA binding protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|241204644|ref|YP_002975740.1| hemimethylated DNA binding protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|424870617|ref|ZP_18294279.1| hemimethylated DNA binding domain protein [Rhizobium leguminosarum
bv. viciae WSM1455]
gi|424913988|ref|ZP_18337352.1| hemimethylated DNA binding domain protein [Rhizobium leguminosarum
bv. trifolii WSM597]
gi|115256791|emb|CAK07881.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
gi|209535087|gb|ACI55022.1| hemimethylated DNA binding protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|240858534|gb|ACS56201.1| hemimethylated DNA binding protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|392850164|gb|EJB02685.1| hemimethylated DNA binding domain protein [Rhizobium leguminosarum
bv. trifolii WSM597]
gi|393166318|gb|EJC66365.1| hemimethylated DNA binding domain protein [Rhizobium leguminosarum
bv. viciae WSM1455]
Length = 109
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G+ V HK+F +R VI +DP + W E ++ QPFY +L + D +
Sbjct: 8 FSIGEVVRHKVFPFRGVIFDVDPEFANTEEWWNSIPAE-VRPSRDQPFYHLLAE--NDES 64
Query: 268 ILVAYVAEENLL 279
VAYV+E+NL+
Sbjct: 65 EYVAYVSEQNLM 76
>gi|300114815|ref|YP_003761390.1| hemimethylated DNA-binding protein [Nitrosococcus watsonii C-113]
gi|299540752|gb|ADJ29069.1| hemimethylated DNA binding protein [Nitrosococcus watsonii C-113]
Length = 105
Score = 50.1 bits (118), Expect = 0.002, Method: Composition-based stats.
Identities = 36/99 (36%), Positives = 47/99 (47%), Gaps = 12/99 (12%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
E A+ F +GQ V HK+F YR V+ DP S W E + Q +P+Y +LV+
Sbjct: 2 EQAKAKFAIGQVVRHKLFHYRGVVVDADPSFQGSPEWYE--HMACSQPPKDRPWYHILVN 59
Query: 262 VHADPNILVAYVAEEN--LLASDQPDMARFDHPYISFLF 298
AD YVAE N L S QP +HP + F
Sbjct: 60 -DADYE---TYVAERNLDLDGSGQP----INHPAVGLFF 90
>gi|86357720|ref|YP_469612.1| hypothetical protein RHE_CH02101 [Rhizobium etli CFN 42]
gi|421588989|ref|ZP_16034201.1| hypothetical protein RCCGEPOP_09454 [Rhizobium sp. Pop5]
gi|86281822|gb|ABC90885.1| hypothetical conserved protein [Rhizobium etli CFN 42]
gi|403706172|gb|EJZ21532.1| hypothetical protein RCCGEPOP_09454 [Rhizobium sp. Pop5]
Length = 109
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G+ V HK+F +R VI +DP + W E ++ QPFY +L + D +
Sbjct: 8 FSIGEVVRHKVFPFRGVIFDVDPEFANTEEWWNSIPAE-VRPSKDQPFYHLLAE--NDES 64
Query: 268 ILVAYVAEENLL 279
VAYV+E+NL+
Sbjct: 65 EYVAYVSEQNLV 76
>gi|424881571|ref|ZP_18305203.1| hemimethylated DNA binding domain protein [Rhizobium leguminosarum
bv. trifolii WU95]
gi|392517934|gb|EIW42666.1| hemimethylated DNA binding domain protein [Rhizobium leguminosarum
bv. trifolii WU95]
Length = 109
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G+ V HK+F +R VI +DP + W E ++ QPFY +L + D +
Sbjct: 8 FSIGEVVRHKVFPFRGVIFDVDPEFANTEEWWNSIPAE-VRPSRDQPFYHLLAE--NDES 64
Query: 268 ILVAYVAEENLL 279
VAYV+E+NL+
Sbjct: 65 EYVAYVSEQNLM 76
>gi|402487709|ref|ZP_10834527.1| hemimethylated DNA binding protein [Rhizobium sp. CCGE 510]
gi|401813578|gb|EJT05922.1| hemimethylated DNA binding protein [Rhizobium sp. CCGE 510]
Length = 109
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G+ V HK+F +R VI +DP + W E ++ QPFY +L + D +
Sbjct: 8 FSIGEVVRHKVFPFRGVIFDVDPEFANTEEWWNSIPAE-VRPSRDQPFYHLLAE--NDDS 64
Query: 268 ILVAYVAEENLL 279
VAYV+E+NL+
Sbjct: 65 EYVAYVSEQNLM 76
>gi|365900719|ref|ZP_09438582.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
gi|365418529|emb|CCE11124.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
Length = 108
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +GQ H+++ R V+ +DP W I +L + QPFY +L + N
Sbjct: 8 FTIGQVARHRVYDLRGVVFDVDPSFSNDEGWRAITMDARLAK--DQPFYYLLAE--CGEN 63
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAG 305
+AYV E+NL+ D R HP I LF D G
Sbjct: 64 SYIAYVPEQNLVEDVSGDPVR--HPDIGELFDMDDQGG 99
>gi|329850836|ref|ZP_08265681.1| hemimethylated DNA binding domain protein [Asticcacaulis
biprosthecum C19]
gi|328841151|gb|EGF90722.1| hemimethylated DNA binding domain protein [Asticcacaulis
biprosthecum C19]
Length = 109
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 205 RFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHA 264
R F +GQ V H +F +R VI +DP + W E A E ++ +QPFY +L + +
Sbjct: 5 RAKFDIGQIVKHNLFEFRGVIFDVDPEFANTDEWWE-AIPESVRPSKNQPFYHLLAE-NG 62
Query: 265 DPNILVAYVAEENLLASDQPDMA--RFDHPYISFLF 298
D + VAY +E NL PD A HP LF
Sbjct: 63 DSH-YVAYASEGNLC----PDTAGGPLHHPQTRLLF 93
>gi|393905838|gb|EFO19811.2| hemimethylated DNA binding domain-containing protein [Loa loa]
Length = 203
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+R+G V HKI GYR VI G D SW++ + ++ P Y V++D
Sbjct: 97 YRVGDVVRHKIHGYRGVIIGWDEKAVAPQSWLDKTHKGR-KEWSEMPNYSVIIDTRDRLI 155
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTD 302
+AYV EEN+ + R HP I F D
Sbjct: 156 PQLAYVVEENIELGE----GRIFHPLIKNYFEAFD 186
>gi|217978379|ref|YP_002362526.1| hemimethylated DNA binding protein [Methylocella silvestris BL2]
gi|217503755|gb|ACK51164.1| hemimethylated DNA binding protein [Methylocella silvestris BL2]
Length = 109
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +GQ V H+ + +R VI +DPV + W + + E+++ QPFY + + +A+
Sbjct: 8 FGIGQVVKHRKYPFRGVIYDVDPVFSNTDEWWQ-SIPEEVRPRKDQPFYHLFAE-NAETE 65
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAG 305
+AYV+E+NLL D R HP + +F G
Sbjct: 66 -YIAYVSEQNLLPDTSGDPVR--HPQVDEIFTRAQDGG 100
>gi|221117768|ref|XP_002161928.1| PREDICTED: uncharacterized protein LOC100198489 [Hydra
magnipapillata]
Length = 212
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
+ A +R+GQ + HK G++ VI G D W++ ++K +QP Y +LVD
Sbjct: 100 DRANVKYRIGQVIIHKKSGFKGVISGWDYKTKAPDLWIQANNLDKFLL--NQPSYSILVD 157
Query: 262 VHADPNILVAYVAEENLLA-----SDQPDMARF 289
+ N +AYV E++L D PD+ +
Sbjct: 158 TKSRVNFKIAYVVEDHLEVVLNHEVDHPDIIDY 190
>gi|340384062|ref|XP_003390534.1| PREDICTED: f-box only protein 21-like [Amphimedon queenslandica]
Length = 105
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 8/105 (7%)
Query: 214 VNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPNILVAYV 273
+ H + Y VI G D C + +W+ V++L GP+QPFY VLV+ + Y
Sbjct: 1 MKHIRYDYYCVIYGWDYSCEMTEAWIHQMGVDQLPLGPNQPFYNVLVNDGTN-----RYA 55
Query: 274 AEENLLASDQPDMARFDHPYISFLFYGTDTAGD-FIPIKQLREKY 317
A+E+L ++ H + F AGD +IP L+EKY
Sbjct: 56 AQESLTICPVSELRPIRHWEVGKYF--KSFAGDRYIPNNALQEKY 98
>gi|268569332|ref|XP_002640492.1| Hypothetical protein CBG13628 [Caenorhabditis briggsae]
Length = 487
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVE-KLQQGPSQPFYQVLVDVHADP 266
FR+G V HK G+R +I G D + ++++A + K +QP Y +L+D
Sbjct: 44 FRVGDVVYHKKLGFRGLIIGWDELAIAPEKFLKVAHGDNKASHFATQPNYAILIDTRDRF 103
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTD 302
++YV +EN+ Q D HP + F G D
Sbjct: 104 TPQMSYVVQENI----QLDKGTIWHPLVEKFFDGFD 135
>gi|402591079|gb|EJW85009.1| hemimethylated DNA binding domain-containing protein [Wuchereria
bancrofti]
Length = 194
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 68/164 (41%), Gaps = 14/164 (8%)
Query: 145 LSSKSEAQDKALSIIRLRADLQKAIDSENYALAADLRDQICKL-----EAESLAASATAL 199
L S S + D + +LR L + S ++ + D++ + E + S
Sbjct: 22 LLSPSSSSDVRYHLHKLRNSLSRF--SRSFLYREEEVDEVTDISEDEKETKYFGGSLEPR 79
Query: 200 AFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQ-PFYQV 258
+R+G V HKI GYR VI G D SW++ + K ++ S+ P Y V
Sbjct: 80 DPRPPYVKYRVGDVVRHKIHGYRGVIIGWDEKAVAPQSWLD--KTHKGRKDWSEMPNYSV 137
Query: 259 LVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTD 302
++D +AYV EEN+ + R HP I F D
Sbjct: 138 IIDTRDRLIPQLAYVVEENIELGE----GRIFHPLIKNYFEAFD 177
>gi|405376113|ref|ZP_11030071.1| hemimethylated DNA binding domain containing protein [Rhizobium sp.
CF142]
gi|397327356|gb|EJJ31663.1| hemimethylated DNA binding domain containing protein [Rhizobium sp.
CF142]
Length = 109
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G+ V HK+F +R VI +DP + W E ++ QPFY +L + D +
Sbjct: 8 FSIGEVVRHKVFPFRGVIFDVDPEFANTEEWWNSIPAE-VRPSKDQPFYHLLAE--NDDS 64
Query: 268 ILVAYVAEENLLA--SDQP 284
VAYV+E+NL++ SD P
Sbjct: 65 EYVAYVSEQNLVSDESDTP 83
>gi|341614818|ref|ZP_08701687.1| hypothetical protein CJLT1_07673 [Citromicrobium sp. JLT1363]
Length = 126
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G V HK+F +R V+ +DP S W E A + ++ QP+Y + + +D
Sbjct: 25 FGVGDVVRHKMFDFRGVVFDIDPTFANSEEWYE-AIPQDIRPERDQPYYHLFAE--SDDA 81
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLF 298
VAYV+++NL DHP I+ +F
Sbjct: 82 YYVAYVSQQNLTGDGI--GGPVDHPNIAEMF 110
>gi|114569720|ref|YP_756400.1| hemimethylated DNA binding protein [Maricaulis maris MCS10]
gi|114340182|gb|ABI65462.1| hemimethylated DNA binding protein [Maricaulis maris MCS10]
Length = 111
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F LG V H++F +R V+ +DP + W E + E ++ QPFY +L + D +
Sbjct: 8 FGLGDVVRHRLFPFRGVVVDVDPQFANTEEWYE-SIPENVRPSKDQPFYHLLAE--NDES 64
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTD 302
AYV+E NLL + +HP I+ F D
Sbjct: 65 YYGAYVSEGNLLPDAE--NGPVEHPQIAEAFESFD 97
>gi|291224930|ref|XP_002732456.1| PREDICTED: cytochrome P450, family 3, subfamily A, polypeptide
4-like [Saccoglossus kowalevskii]
Length = 706
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 3/111 (2%)
Query: 192 LAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGP 251
A S + A +R+GQ + HK +GYR VI G D W++ +
Sbjct: 101 FAGSPEPRSPRPAHVKYRVGQVIRHKKWGYRGVITGWDLTAKAPEEWLKQMHPKDKPYWR 160
Query: 252 SQPFYQVLVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTD 302
+ P Y +LVD + Y+ EEN+ + HP I F G D
Sbjct: 161 NHPNYAILVDTRDRAVPQLTYIPEENIEIITN---TKIIHPEIENYFEGFD 208
>gi|430003745|emb|CCF19534.1| conserved hypothetical protein [Rhizobium sp.]
Length = 109
Score = 49.3 bits (116), Expect = 0.003, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G+ V HK+F +R V+ +DP S W E ++ QPFY +L + D
Sbjct: 8 FTIGEVVRHKVFPFRGVVFDVDPEFANSEEWWNAIPAE-IRPNRDQPFYHLLAE--NDET 64
Query: 268 ILVAYVAEENLLASDQPDM 286
VAYV+E+N L D+ DM
Sbjct: 65 EYVAYVSEQN-LEHDESDM 82
>gi|196010724|ref|XP_002115226.1| hypothetical protein TRIADDRAFT_59192 [Trichoplax adhaerens]
gi|190581997|gb|EDV22071.1| hypothetical protein TRIADDRAFT_59192 [Trichoplax adhaerens]
Length = 591
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 17/115 (14%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+++G + H+ + Y VI G D C + +W+ V+ L G QPFY VLV+ +
Sbjct: 486 YKVGMMMQHRRYNYTCVIYGWDYECRMTQAWVTQMGVDMLPNGTKQPFYNVLVEDGSQ-- 543
Query: 268 ILVAYVAEENLLASDQ-----PDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL ++ P+ F+ + T +++P QLR +Y
Sbjct: 544 ---RYAAQENLRQIEEQIEPCPNAEVGK-------FFQSFTGTNYVPNDQLRIRY 588
>gi|56698734|ref|YP_168608.1| hypothetical protein SPO3412 [Ruegeria pomeroyi DSS-3]
gi|56680471|gb|AAV97137.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3]
Length = 110
Score = 49.3 bits (116), Expect = 0.003, Method: Composition-based stats.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+ LGQ V H+ +R V+ +DP + W + A E + QPFY +L + D +
Sbjct: 10 YHLGQVVRHRKHPFRGVVFDVDPQFANTEEWYQ-AIPEDSRPLKEQPFYHLLAE--NDQS 66
Query: 268 ILVAYVAEENLLA--SDQPDMARFDHPYISFLF 298
VAYV+E+NL+A S +P DHP I +F
Sbjct: 67 YYVAYVSEQNLIADYSGEP----VDHPDIPDMF 95
>gi|163853317|ref|YP_001641360.1| hemimethylated DNA binding protein [Methylobacterium extorquens
PA1]
gi|254563240|ref|YP_003070335.1| DNA-binding protein, hemimethylated [Methylobacterium extorquens
DM4]
gi|418063669|ref|ZP_12701311.1| hemimethylated DNA binding protein [Methylobacterium extorquens DSM
13060]
gi|163664922|gb|ABY32289.1| hemimethylated DNA binding protein [Methylobacterium extorquens
PA1]
gi|254270518|emb|CAX26521.1| putative DNA-binding protein, hemimethylated (yccV-like)
[Methylobacterium extorquens DM4]
gi|373557362|gb|EHP83794.1| hemimethylated DNA binding protein [Methylobacterium extorquens DSM
13060]
Length = 124
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Query: 190 ESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQ 249
E+ + T + A+F LG V H+I+ +R V+ +DP + W +A E ++
Sbjct: 7 EAYLSVMTQTSMRTAKFG--LGAVVRHRIYPFRGVVFDVDPEFANTEEWW-LAIPEDVRP 63
Query: 250 GPSQPFYQVLVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLF 298
QPFY +L + +AD VAYV+E+NL+ + R H IS +F
Sbjct: 64 RKDQPFYHLLAE-NADSE-YVAYVSEQNLVPDTSGEALR--HAGISEVF 108
>gi|85704073|ref|ZP_01035176.1| hypothetical protein ROS217_13781 [Roseovarius sp. 217]
gi|85671393|gb|EAQ26251.1| hypothetical protein ROS217_13781 [Roseovarius sp. 217]
Length = 108
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 204 ARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVH 263
R + LGQ V HK +R VI +DP + W + E + QPFY +L +
Sbjct: 4 TRAKYHLGQVVRHKKHPFRGVIFDVDPQFSNTEEWY-ASIPEDSRPSKEQPFYHLLAE-- 60
Query: 264 ADPNILVAYVAEENLLA--SDQPDMARFDHPYISFLF 298
+ + VAYV+E+NL+A S +P DHP I LF
Sbjct: 61 NEQSYYVAYVSEQNLVADYSGEP----VDHPDIPDLF 93
>gi|424890413|ref|ZP_18314012.1| hemimethylated DNA binding domain protein [Rhizobium leguminosarum
bv. trifolii WSM2012]
gi|393172631|gb|EJC72676.1| hemimethylated DNA binding domain protein [Rhizobium leguminosarum
bv. trifolii WSM2012]
Length = 109
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G+ V HK+F +R VI +DP + W E ++ QPFY +L + D +
Sbjct: 8 FSIGEVVRHKVFPFRGVIFDVDPEFANTEEWWNSIPAE-VRPSRDQPFYHLLAE--NDES 64
Query: 268 ILVAYVAEENL 278
VAYV+E+NL
Sbjct: 65 EYVAYVSEQNL 75
>gi|414162571|ref|ZP_11418818.1| hemimethylated DNA binding domain-containing protein [Afipia felis
ATCC 53690]
gi|410880351|gb|EKS28191.1| hemimethylated DNA binding domain-containing protein [Afipia felis
ATCC 53690]
Length = 109
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F++GQ V H+ +R VI +D + W ++ E+++ QPFY +L + ++D
Sbjct: 8 FQIGQVVRHRSLSFRGVIFDIDAEFNNTEEWW-MSIPEEMRPHKDQPFYHLLAE-NSDSE 65
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDF 307
+AYV+E+NLL + D R H +S +F D AG +
Sbjct: 66 -YIAYVSEQNLLPDETGDPVR--HSQVSEIFI-KDKAGGY 101
>gi|254440379|ref|ZP_05053873.1| hypothetical protein OA307_5249 [Octadecabacter antarcticus 307]
gi|198255825|gb|EDY80139.1| hypothetical protein OA307_5249 [Octadecabacter antarcticus 307]
Length = 108
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+ LGQ V H+ +R V+ +D + + W + A E+ + QPFY +L + D +
Sbjct: 8 YHLGQVVRHRKHPFRGVVFDVDAMFTNTEEWYD-AIPEEARPQKDQPFYHLLAE--NDQS 64
Query: 268 ILVAYVAEENLLA--SDQPDMARFDHPYISFLF 298
VAYV+E+NL+A S QP DHP + LF
Sbjct: 65 YYVAYVSEQNLVADYSGQP----VDHPDLDDLF 93
>gi|89070983|ref|ZP_01158206.1| hypothetical protein OG2516_12466 [Oceanicola granulosus HTCC2516]
gi|89043446|gb|EAR49661.1| hypothetical protein OG2516_12466 [Oceanicola granulosus HTCC2516]
Length = 108
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 204 ARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVH 263
R + LGQ V H+ +R V+ +D + + W E A E + QPFY +L +
Sbjct: 4 TRAKYSLGQVVRHRKHPFRGVVFDVDAMFNNTDEWYE-AIPEDARPKKDQPFYHLLAE-- 60
Query: 264 ADPNILVAYVAEENLLA--SDQPDMARFDHPYISFLF 298
D + VAYV+E+NL+A S +P DHP + LF
Sbjct: 61 NDQSYYVAYVSEQNLVADYSGEP----VDHPDLDDLF 93
>gi|390357817|ref|XP_003729107.1| PREDICTED: uncharacterized protein LOC100888448 isoform 1
[Strongylocentrotus purpuratus]
Length = 246
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 47/102 (46%), Gaps = 14/102 (13%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIA----QVEKLQQGPSQPFYQVLVDV- 262
FR+GQ V HK GYR VI G D + W+ Q+ L+ PFY + +DV
Sbjct: 134 FRIGQVVRHKRLGYRGVIVGWDLTAKAPAQWLSDNIPRDQIHTLK----FPFYALAIDVR 189
Query: 263 --HADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTD 302
H P +V Y +EE+L P M + HP + F D
Sbjct: 190 DMHV-PVPIVVYHSEEDLEVMTIPTMVQ--HPQVDEYFTAYD 228
>gi|417859810|ref|ZP_12504866.1| hypothetical protein Agau_C200872 [Agrobacterium tumefaciens F2]
gi|338822874|gb|EGP56842.1| hypothetical protein Agau_C200872 [Agrobacterium tumefaciens F2]
Length = 116
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F LG+ V HK+F +R V+ +DP + W E ++ QPFY +L + +
Sbjct: 15 FTLGEIVRHKVFPFRGVVIDVDPEYANTEEWWNAIPAE-IRPDRDQPFYHLLAE--NEET 71
Query: 268 ILVAYVAEENLL 279
VAYV+E+NL+
Sbjct: 72 EYVAYVSEQNLV 83
>gi|424895009|ref|ZP_18318583.1| hemimethylated DNA binding domain protein [Rhizobium leguminosarum
bv. trifolii WSM2297]
gi|393179236|gb|EJC79275.1| hemimethylated DNA binding domain protein [Rhizobium leguminosarum
bv. trifolii WSM2297]
Length = 109
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G+ V HK+F +R VI +DP + W E ++ QPFY +L + D +
Sbjct: 8 FSIGEVVRHKVFPFRGVIFDVDPEFANTEEWWNSIPAE-VRPSRDQPFYHLLAE--NDES 64
Query: 268 ILVAYVAEENL 278
VAYV+E+NL
Sbjct: 65 EYVAYVSEQNL 75
>gi|154247792|ref|YP_001418750.1| hemimethylated DNA binding protein [Xanthobacter autotrophicus Py2]
gi|154161877|gb|ABS69093.1| hemimethylated DNA binding protein [Xanthobacter autotrophicus Py2]
Length = 107
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
FR+G+ V HK F +R V+ +DPV + W ++ E+++ QPFY +L + +AD
Sbjct: 6 FRIGEVVRHKHFPFRGVVFDVDPVFDNTEEWW-LSIPEEIRPHKDQPFYHLLAE-NADSE 63
Query: 268 ILVAYVAEENL 278
VAYV+E+NL
Sbjct: 64 -YVAYVSEQNL 73
>gi|357406876|ref|YP_004918800.1| heat shock protein [Methylomicrobium alcaliphilum 20Z]
gi|351719541|emb|CCE25217.1| putative heat shock protein [Methylomicrobium alcaliphilum 20Z]
Length = 103
Score = 48.9 bits (115), Expect = 0.004, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+ LGQ V+HK+F YR VI +D W E +V + + +QP+Y VLVD +
Sbjct: 6 YFLGQIVHHKLFNYRGVIYDVDFEFRGGEEWYE--KVARSRPAKNQPWYHVLVDNASHQ- 62
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLF 298
YVAE NL+ S + R +P + + F
Sbjct: 63 ---TYVAECNLMVSQ--NKQRIHNPMVDYYF 88
>gi|222085978|ref|YP_002544510.1| hypothetical protein Arad_2371 [Agrobacterium radiobacter K84]
gi|221723426|gb|ACM26582.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 115
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 198 ALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQ 257
A+ NA+F +G V H++F +R VI +DP + W +E ++ QPFY
Sbjct: 6 AMKQRNAKF--NIGDVVRHRMFPFRGVIFDVDPEFANTEEWWNSIPME-VRPSKDQPFYH 62
Query: 258 VLVDVHADPNILVAYVAEENLL 279
+L + D VAYV+E+NL+
Sbjct: 63 LLAE--NDETEYVAYVSEQNLI 82
>gi|71082993|ref|YP_265712.1| hypothetical protein SAR11_0288 [Candidatus Pelagibacter ubique
HTCC1062]
gi|91762585|ref|ZP_01264550.1| hypothetical protein PU1002_04931 [Candidatus Pelagibacter ubique
HTCC1002]
gi|71062106|gb|AAZ21109.1| conserved hypothetical protein [Candidatus Pelagibacter ubique
HTCC1062]
gi|91718387|gb|EAS85037.1| hypothetical protein PU1002_04931 [Candidatus Pelagibacter ubique
HTCC1002]
Length = 106
Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 199 LAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQV 258
+A + A+F+ +G V HK F +R VI +D S W + + + ++ QPFY +
Sbjct: 1 MAIQKAKFS--IGDIVKHKHFEFRGVIYDVDFEFNNSEEWYQ-SIPKNVRPRKDQPFYHL 57
Query: 259 LVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIP 309
L + D AYV+E+NLL D D + HP I +F G + F P
Sbjct: 58 LAE--NDEITYEAYVSEQNLLMDDSEDPIK--HPLIEEIFSGKRGSSYFKP 104
>gi|218532174|ref|YP_002422990.1| hemimethylated DNA binding protein [Methylobacterium extorquens
CM4]
gi|240140729|ref|YP_002965209.1| DNA-binding protein, hemimethylated (yccV-like) [Methylobacterium
extorquens AM1]
gi|218524477|gb|ACK85062.1| hemimethylated DNA binding protein [Methylobacterium extorquens
CM4]
gi|240010706|gb|ACS41932.1| putative DNA-binding protein, hemimethylated (yccV-like)
[Methylobacterium extorquens AM1]
Length = 112
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F LG V H+I+ +R V+ +DP + W +A E ++ QPFY +L + +AD
Sbjct: 11 FGLGAVVRHRIYPFRGVVFDVDPEFANTEEWW-LAIPEDVRPRKDQPFYHLLAE-NADSE 68
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLF 298
VAYV+E+NL+ + R H IS +F
Sbjct: 69 -YVAYVSEQNLVPDTSGEALR--HAGISEVF 96
>gi|294142405|ref|YP_003558383.1| hypothetical protein SVI_3634 [Shewanella violacea DSS12]
gi|293328874|dbj|BAJ03605.1| conserved hypothetical protein [Shewanella violacea DSS12]
Length = 112
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 204 ARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVH 263
A+ + +G+ ++H++FGYR VI +D S W E+ V + + +P+Y VLVD
Sbjct: 11 AKAKYSIGELIHHRLFGYRGVILDVDADFQLSPEWYEM--VARSRPAKDKPWYHVLVDQA 68
Query: 264 ADPNILVAYVAEENLLA 280
+ YVAE+NL A
Sbjct: 69 SHS----TYVAEQNLEA 81
>gi|170748073|ref|YP_001754333.1| hemimethylated DNA binding protein [Methylobacterium radiotolerans
JCM 2831]
gi|170654595|gb|ACB23650.1| hemimethylated DNA binding protein [Methylobacterium radiotolerans
JCM 2831]
Length = 112
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G V H+I+ +R V+ +DPV + W ++ E+++ QPFY +L + +A+
Sbjct: 11 FAIGAVVRHRIYPFRGVVFDVDPVFDNTEEWW-LSIPEEVRPRKDQPFYHLLAE-NAETE 68
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDF 307
VAYV+E+NLL + R H I+ +F D AG +
Sbjct: 69 -YVAYVSEQNLLPDTSGEALR--HAGIAEMF-ERDAAGAY 104
>gi|23012279|ref|ZP_00052404.1| COG3785: Uncharacterized conserved protein [Magnetospirillum
magnetotacticum MS-1]
Length = 124
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 190 ESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQ 249
E+ + T + A+F LG V H+I+ +R V+ +DP + W +A E+++
Sbjct: 7 EAYLSVMTQTSMRTAKFG--LGAVVRHRIYPFRGVVFDVDPEFSNTEEWW-LAIPEEVRP 63
Query: 250 GPSQPFYQVLVDVHADPNILVAYVAEENLL 279
QPFY +L + +AD VAYV+E+NL+
Sbjct: 64 RKDQPFYHLLAE-NADSE-YVAYVSEQNLV 91
>gi|372280960|ref|ZP_09516996.1| hypothetical protein OS124_15005 [Oceanicola sp. S124]
Length = 108
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+ LGQ V H+ +R VI +DP + W + A E + QPFY +L + D +
Sbjct: 8 YHLGQVVRHRKHPFRGVIFDVDPEFSNTEEWYD-AIPEDARPMRDQPFYHLLAE--NDQS 64
Query: 268 ILVAYVAEENLLASDQPDMA--RFDHPYISFLF 298
VAYV+E+NL + DM+ DHP I LF
Sbjct: 65 YYVAYVSEQNL----EEDMSGEPVDHPDIPDLF 93
>gi|114704736|ref|ZP_01437644.1| hypothetical protein FP2506_07366 [Fulvimarina pelagi HTCC2506]
gi|114539521|gb|EAU42641.1| hypothetical protein FP2506_07366 [Fulvimarina pelagi HTCC2506]
Length = 143
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 7/106 (6%)
Query: 195 SATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQP 254
+ + + ARF +GQ V H+++ +R VI +DPV + W E E ++ QP
Sbjct: 31 NGVEFSMQTARFF--IGQIVKHRVYPFRGVIFDVDPVFDNTEEWYEAIPAE-VRPRKDQP 87
Query: 255 FYQVLVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYG 300
FY + + +A+ VAY +E+NL+ + R HP I +F G
Sbjct: 88 FYHLFAE-NAE-TEYVAYCSEQNLVPDESGQPVR--HPQIREMFDG 129
>gi|254464510|ref|ZP_05077921.1| hypothetical protein RBY4I_1111 [Rhodobacterales bacterium Y4I]
gi|206685418|gb|EDZ45900.1| hypothetical protein RBY4I_1111 [Rhodobacterales bacterium Y4I]
Length = 110
Score = 48.5 bits (114), Expect = 0.005, Method: Composition-based stats.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 205 RFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHA 264
R + LGQ V H+ +R V+ +DP + W E A E + QPFY +L +
Sbjct: 7 RAKYNLGQVVRHRKHPFRGVVFDVDPEFSNTEEWYE-AIPEDSRPVKDQPFYHLLAE--N 63
Query: 265 DPNILVAYVAEENLLA--SDQPDMARFDHPYISFLFYGTDTAGDF 307
D + VAYV+E+NL+A S +P HP + +F GT G +
Sbjct: 64 DQSYYVAYVSEQNLVADYSGEP----VGHPDVPEMF-GTFDGGAY 103
>gi|296417597|ref|XP_002838439.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634378|emb|CAZ82630.1| unnamed protein product [Tuber melanosporum]
Length = 567
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCC--ESSSWMEIAQVEKLQQGPSQPFYQVLVDVHAD 265
+R+G HK + ++ V+ G C E WM+ V+ L +G QPFY LV +
Sbjct: 460 YRVGTVFVHKRYPFQGVVFGWSRTCAPREGEEWMQTMGVDTLSRGRHQPFYLALVMDGS- 518
Query: 266 PNILVAYVAEENLLAS 281
V YVAEEN++ S
Sbjct: 519 ----VRYVAEENIVVS 530
>gi|323135578|ref|ZP_08070661.1| hemimethylated DNA binding protein [Methylocystis sp. ATCC 49242]
gi|322398669|gb|EFY01188.1| hemimethylated DNA binding protein [Methylocystis sp. ATCC 49242]
Length = 110
Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +GQ V H+ + +R VI +DPV + W ++ E+L+ QPFY + + +A+
Sbjct: 9 FAIGQVVKHRRYPFRGVIYDVDPVFANTEEWW-LSIPEELRPRKDQPFYHLFAE-NAETE 66
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLF 298
VAYV+E+NL+ D R HP + F
Sbjct: 67 -YVAYVSEQNLVPDTSGDPVR--HPQVEETF 94
>gi|402772601|ref|YP_006592138.1| hemimethylated DNA binding protein [Methylocystis sp. SC2]
gi|401774621|emb|CCJ07487.1| Hemimethylated DNA binding protein [Methylocystis sp. SC2]
Length = 110
Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +GQ V H+ + +R VI +DPV + W ++ E+L+ QPFY + + +A+
Sbjct: 9 FAIGQVVKHRRYPFRGVIYDVDPVFANTEEWW-LSIPEELRPNKDQPFYHLFAE-NAETE 66
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLF 298
VAYV+E+NLL + R HP + F
Sbjct: 67 -YVAYVSEQNLLPDNTNRPVR--HPQVDETF 94
>gi|126724344|ref|ZP_01740187.1| hypothetical protein RB2150_10951 [Rhodobacterales bacterium
HTCC2150]
gi|126705508|gb|EBA04598.1| hypothetical protein RB2150_10951 [Rhodobacteraceae bacterium
HTCC2150]
Length = 113
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 11/100 (11%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+ LGQ V HK +R V+ +DP + W + A E+ + +QPFY +L + D +
Sbjct: 13 YHLGQIVRHKRHPFRGVVFDVDPEFSNTEEWYD-AIPEESRPVKNQPFYHLLAE--NDQS 69
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDF 307
VAYV+E+NL+ + + HP +S LF GDF
Sbjct: 70 YYVAYVSEQNLIEDETGEPMT--HPDLSDLF------GDF 101
>gi|188583582|ref|YP_001927027.1| hemimethylated DNA binding protein [Methylobacterium populi BJ001]
gi|179347080|gb|ACB82492.1| hemimethylated DNA binding protein [Methylobacterium populi BJ001]
Length = 112
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F LG V H+I+ +R V+ +DP + W +A E ++ QPFY +L + +AD
Sbjct: 11 FGLGAVVRHRIYPFRGVVFDVDPEFANTEEWW-LAIPEDVRPRKDQPFYHLLAE-NADSE 68
Query: 268 ILVAYVAEENLL 279
VAYV+E+NL+
Sbjct: 69 -YVAYVSEQNLV 79
>gi|163751555|ref|ZP_02158777.1| hypothetical protein KT99_01122 [Shewanella benthica KT99]
gi|161328563|gb|EDP99716.1| hypothetical protein KT99_01122 [Shewanella benthica KT99]
Length = 109
Score = 48.1 bits (113), Expect = 0.006, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 196 ATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPF 255
T NA+F+ +G ++H++FGYR VI +D + +W E QV K + ++P+
Sbjct: 2 GTVTNITNAKFS--VGDLIHHRLFGYRGVIVDVDLNFQLTDNWYE--QVAKSRPPKNKPW 57
Query: 256 YQVLVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLF 298
Y VL VH + YVAE+NL D + HP + F
Sbjct: 58 YSVL--VHGSSH--STYVAEQNLAPDDI--LEPISHPMLKQYF 94
>gi|99079904|ref|YP_612058.1| hemimethylated DNA-binding region [Ruegeria sp. TM1040]
gi|99036184|gb|ABF62796.1| Hemimethylated DNA-binding region [Ruegeria sp. TM1040]
Length = 108
Score = 48.1 bits (113), Expect = 0.006, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 205 RFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHA 264
R + LGQ V H+ +R V+ +DP + W E A E + QP+Y +L +
Sbjct: 5 RAKYNLGQVVRHRKHPFRGVVFDVDPEFANTEEWYE-AIPEDSRPAKEQPYYHLLAE--N 61
Query: 265 DPNILVAYVAEENLLA--SDQPDMARFDHPYISFLFYGTD 302
+ VAYV+E+NL+A S +P HP + +F G D
Sbjct: 62 EQTYYVAYVSEQNLVADYSGEP----VTHPDLHEMFTGFD 97
>gi|254475906|ref|ZP_05089292.1| hypothetical protein RR11_1744 [Ruegeria sp. R11]
gi|214030149|gb|EEB70984.1| hypothetical protein RR11_1744 [Ruegeria sp. R11]
Length = 108
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 204 ARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVH 263
R F LGQ V H+ +R V+ +DP + W + A E + QP+Y +L +
Sbjct: 4 TRAKFSLGQVVRHRKHPFRGVVFDVDPEFANTEEWYQ-AIPEDSRPIKEQPYYHLLAE-- 60
Query: 264 ADPNILVAYVAEENLLASDQPDMA--RFDHPYISFLF 298
D VAYV+E+NLL PD + HP +S +F
Sbjct: 61 NDQTYYVAYVSEQNLL----PDYSGEPIGHPDVSEMF 93
>gi|403049054|ref|ZP_10903538.1| hemimethylated DNA binding protein [SAR86 cluster bacterium SAR86D]
gi|403049403|ref|ZP_10903887.1| hemimethylated DNA binding protein [SAR86 cluster bacterium SAR86D]
Length = 110
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 6/107 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G V H+ +R VI +DP S W +A E+++ QPFY + + +
Sbjct: 9 FSIGNIVKHRFLNFRGVIFDLDPEFNNSEEWY-LAIPEQIRPSKDQPFYHLFAE--NEEI 65
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLR 314
+AYV+E+NLL + +HP I +F + +++P K+ +
Sbjct: 66 FYIAYVSEQNLLLDK--SQKQCNHPGIKEIF-ESFNGLNYLPYKKAK 109
>gi|225554853|gb|EEH03147.1| F-box domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 578
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVL 259
E+ +++GQ H+ + Y AVI G D C WM+ +++L+ G Q FY VL
Sbjct: 519 EHKNIKYKIGQVFRHRRYDYVAVITGWDAECGAGEQWMQRMGIDRLRAGRHQSFYHVL 576
>gi|418056247|ref|ZP_12694300.1| hemimethylated DNA binding protein [Hyphomicrobium denitrificans
1NES1]
gi|353209466|gb|EHB74869.1| hemimethylated DNA binding protein [Hyphomicrobium denitrificans
1NES1]
Length = 110
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 12/117 (10%)
Query: 200 AFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVL 259
A +A+FA +GQ V H+I+ +R +I +DP + W ++ E ++ QP+Y +
Sbjct: 3 AIRHAKFA--IGQVVRHRIYPFRGLIFDIDPEFANTEEWW-LSIPEDVRPRKDQPYYHLY 59
Query: 260 VDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREK 316
+ +A+ L AYV+E+NLL + A HP IS F +D +G I +LR +
Sbjct: 60 AE-NAETTYL-AYVSEQNLLLDET--SAPLRHPDISDRFI-SDESG----IYRLRPR 107
>gi|398828368|ref|ZP_10586569.1| hemimethylated DNA binding domain containing protein
[Phyllobacterium sp. YR531]
gi|398218403|gb|EJN04913.1| hemimethylated DNA binding domain containing protein
[Phyllobacterium sp. YR531]
Length = 113
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F++GQ V+H+IF +R +I +DP + W + E ++ QPFY + + +A+
Sbjct: 12 FQIGQVVSHRIFAFRGLIFDVDPEFNNTEEWYR-SIPEDIRPRRDQPFYHLFAE-NAESE 69
Query: 268 ILVAYVAEENLLA 280
VAYV+E+NL+A
Sbjct: 70 -YVAYVSEQNLVA 81
>gi|424864390|ref|ZP_18288294.1| hemimethylated DNA binding protein [SAR86 cluster bacterium SAR86B]
gi|400759819|gb|EJP74000.1| hemimethylated DNA binding protein [SAR86 cluster bacterium SAR86B]
Length = 112
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G+ V H+ +R I +DP S W ++ E ++ QPFY +L +
Sbjct: 9 FSIGEIVKHRFLAFRGAIIDIDPEFNNSEEWY-LSIPENIRPRKEQPFYHLLAEDLEKKI 67
Query: 268 ILVAYVAEENLLASD------QPDMARF 289
VAYV+E+NLL + P++ +F
Sbjct: 68 CYVAYVSEQNLLIDESYEECVHPEIKKF 95
>gi|126733900|ref|ZP_01749647.1| hypothetical protein RCCS2_07074 [Roseobacter sp. CCS2]
gi|126716766|gb|EBA13630.1| hypothetical protein RCCS2_07074 [Roseobacter sp. CCS2]
Length = 108
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 204 ARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVH 263
R + LGQ V H+ +R V+ +D + + W A E + QPFY +L +
Sbjct: 4 TRAKYHLGQVVRHRKHPFRGVVFDVDAMFSNTDEWYN-AIPEDSRPKKDQPFYHLLAE-- 60
Query: 264 ADPNILVAYVAEENLLA--SDQPDMARFDHPYISFLF 298
D + VAYV+E+NL+A S +P DHP + LF
Sbjct: 61 NDQSFYVAYVSEQNLVADYSGEP----VDHPDLDDLF 93
>gi|83945235|ref|ZP_00957584.1| hypothetical protein OA2633_00670 [Oceanicaulis sp. HTCC2633]
gi|83851405|gb|EAP89261.1| hypothetical protein OA2633_00670 [Oceanicaulis sp. HTCC2633]
Length = 109
Score = 47.8 bits (112), Expect = 0.008, Method: Composition-based stats.
Identities = 35/100 (35%), Positives = 48/100 (48%), Gaps = 15/100 (15%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLV---DVHA 264
F +G V H++F +R VI +DPV + W ++ E L+ QPFY +L D H
Sbjct: 6 FTIGDVVRHRLFPFRGVIFDVDPVFANTEDWW-LSIPESLRPDKDQPFYHLLAENEDGHY 64
Query: 265 DPNILVAYVAEENLLASDQPDM--ARFDHPYISFLFYGTD 302
+ AYV+E NLL PD HP +F G D
Sbjct: 65 E-----AYVSEGNLL----PDAENGAVGHPDTVEIFEGFD 95
>gi|218516086|ref|ZP_03512926.1| hypothetical protein Retl8_21653 [Rhizobium etli 8C-3]
Length = 100
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 210 LGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPNIL 269
+G+ V HK+F +R VI +DP + W E ++ QPFY +L + D +
Sbjct: 1 IGEVVRHKVFPFRGVIFDVDPEFANTEEWWNSIPAE-VRPSKDQPFYHLLAE--NDESEY 57
Query: 270 VAYVAEENLL 279
VAYV+E+NL+
Sbjct: 58 VAYVSEQNLV 67
>gi|83855245|ref|ZP_00948775.1| hypothetical protein NAS141_10956 [Sulfitobacter sp. NAS-14.1]
gi|83843088|gb|EAP82255.1| hypothetical protein NAS141_10956 [Sulfitobacter sp. NAS-14.1]
Length = 99
Score = 47.8 bits (112), Expect = 0.008, Method: Composition-based stats.
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
Query: 210 LGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPNIL 269
+GQ V HK +R VI +DP + W E A E + QP+Y +L + + +
Sbjct: 1 MGQIVRHKKHPFRGVIFDVDPEFANTEEWYE-AIPEDSRPEKDQPYYHLLAE--NEQSYY 57
Query: 270 VAYVAEENLLA--SDQPDMARFDHPYISFLF 298
VAYV+E+NL+A S +P DHP I LF
Sbjct: 58 VAYVSEQNLVADYSGEP----VDHPDIPDLF 84
>gi|159042626|ref|YP_001531420.1| hemimethylated DNA-binding protein [Dinoroseobacter shibae DFL 12]
gi|157910386|gb|ABV91819.1| hemimethylated DNA binding protein [Dinoroseobacter shibae DFL 12]
Length = 108
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
Query: 204 ARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVH 263
A+ + LGQ V H+ +R V+ +DP + W + A E + QPFY +L +
Sbjct: 4 AQAKYNLGQVVRHRKHPFRGVVFDIDPEFSNTEEWYD-AIPEDSRPRKDQPFYHLLAE-- 60
Query: 264 ADPNILVAYVAEENLL--ASDQPDMARFDHPYISFLFYGTDTAGDF 307
D + VAYV+E+NL+ A+ P DHP + LF GDF
Sbjct: 61 NDQSYYVAYVSEQNLVVDAAGGP----VDHPDVPDLF------GDF 96
>gi|251788843|ref|YP_003003564.1| heat shock protein HspQ [Dickeya zeae Ech1591]
gi|247537464|gb|ACT06085.1| hemimethylated DNA binding protein [Dickeya zeae Ech1591]
Length = 102
Score = 47.8 bits (112), Expect = 0.008, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ++ HK+ GY V+ +DP E W E++ + L+ P ++ V+ D H P
Sbjct: 6 FTIGQQIRHKLLGYPGVVIDIDPEYSLEQPKWEELSVNDTLRTAPW--YHVVMEDEHGRP 63
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFL 297
+ Y+AEE L+ D + DHP + L
Sbjct: 64 --IHTYLAEEQLINEDPNPI---DHPSLDEL 89
>gi|167045732|gb|ABZ10379.1| hypothetical protein ALOHA_HF4000APKG2098ctg37 [uncultured marine
bacterium HF4000_APKG2098]
Length = 106
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 15/115 (13%)
Query: 199 LAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQV 258
+A A+F+ +G V HK F +R VI +D S W + + + ++ +QP+Y +
Sbjct: 1 MAITTAKFS--IGDVVKHKHFNFRGVIYDVDFEFNNSEEWYQ-SIPKDVRPRKNQPYYHL 57
Query: 259 LVDVHADPNILV--AYVAEENLLA--SDQPDMARFDHPYISFLFYGTDTAGDFIP 309
L A+ N + AYV+E+NL++ SD+P HP I +F G +G F P
Sbjct: 58 L----AENNEITYEAYVSEQNLVSDDSDEP----IKHPLIEEIFAGKKGSGYFKP 104
>gi|440226625|ref|YP_007333716.1| hemimethylated DNA binding protein [Rhizobium tropici CIAT 899]
gi|440038136|gb|AGB71170.1| hemimethylated DNA binding protein [Rhizobium tropici CIAT 899]
Length = 109
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G V H++F +R VI +DP + W E ++ QPFY +L + D
Sbjct: 8 FNIGDVVRHRMFPFRGVIFDVDPEFANTEEWWNSIPAE-VRPDKDQPFYHLLAE--NDET 64
Query: 268 ILVAYVAEENLL 279
VAYV+E+NL+
Sbjct: 65 EYVAYVSEQNLI 76
>gi|154281251|ref|XP_001541438.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411617|gb|EDN07005.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 242
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVL 259
E+ +++GQ H+ + Y AVI G D C WM+ +++L+ G Q FY VL
Sbjct: 183 EHKNIKYKIGQVFRHRRYDYVAVITGWDAECGAGEQWMQRMGIDRLRAGRHQSFYHVL 240
>gi|449688715|ref|XP_004211825.1| PREDICTED: uncharacterized protein LOC101235532, partial [Hydra
magnipapillata]
Length = 235
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
EN +R+G + H + Y VI G D C + W + L+ QP+Y VLVD
Sbjct: 111 ENKDVLYRIGMVMRHLRYNYICVIYGWDNECIMNEEWKMQMGIYNLKHKDKQPYYNVLVD 170
Query: 262 VHADPNILVAYVAEENLLAS 281
+ YVA+EN++ +
Sbjct: 171 DGS-----THYVAQENIVQT 185
>gi|83952506|ref|ZP_00961237.1| hypothetical protein ISM_10151 [Roseovarius nubinhibens ISM]
gi|83836179|gb|EAP75477.1| hypothetical protein ISM_10151 [Roseovarius nubinhibens ISM]
Length = 108
Score = 47.4 bits (111), Expect = 0.009, Method: Composition-based stats.
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 205 RFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHA 264
R + LGQ V HK +R V+ +DP + W + + E + QPFY +L +
Sbjct: 5 RAKYNLGQVVQHKKHPFRGVVFDVDPEFSNTEEWYD-SIPEDSRPTRDQPFYHLLAE--N 61
Query: 265 DPNILVAYVAEENLLA--SDQPDMARFDHPYISFLF 298
D + VAYV+E+NL+A S P +HP I LF
Sbjct: 62 DQSYYVAYVSEQNLIADYSGVP----VEHPDIPDLF 93
>gi|302698103|ref|XP_003038730.1| hypothetical protein SCHCODRAFT_104151 [Schizophyllum commune H4-8]
gi|300112427|gb|EFJ03828.1| hypothetical protein SCHCODRAFT_104151, partial [Schizophyllum
commune H4-8]
Length = 602
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+ +G H +GY VI G C SW+ V+ L +G +QPFY V D++
Sbjct: 471 YFVGMIFRHVRYGYTGVITGWSSTCESPESWIHQMGVDHLPRGRNQPFYHVF-DMYGQQR 529
Query: 268 ILVAYVAEENLLASDQP 284
YVAEEN+ P
Sbjct: 530 ----YVAEENIAVDHSP 542
>gi|418937326|ref|ZP_13490977.1| hemimethylated DNA binding protein [Rhizobium sp. PDO1-076]
gi|375055985|gb|EHS52194.1| hemimethylated DNA binding protein [Rhizobium sp. PDO1-076]
Length = 109
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 10/104 (9%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G V HK+F +R VI +DP S W E ++ QPFY +L +
Sbjct: 8 FGIGDVVRHKVFPFRGVIFDVDPEFANSEEWWNAIPAE-VRPNKDQPFYHLLAE--NSET 64
Query: 268 ILVAYVAEENLLASDQPDMAR--FDHPYISFLFYGTDTAGDFIP 309
VAYV+E+NL +PD + +P+I +F AG + P
Sbjct: 65 EYVAYVSEQNL----EPDGSEEPLRNPHIQQIF-DKAQAGHYRP 103
>gi|295657185|ref|XP_002789164.1| F-box domain-containing protein [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226284508|gb|EEH40074.1| F-box domain-containing protein [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 572
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVL 259
E+ +++GQ H+ + Y AVI G D C WM+ +++L+ G Q FY VL
Sbjct: 483 EHKNVKYKIGQVFRHRRYDYVAVITGWDAECGAGEQWMQQMGIDRLRAGKHQSFYHVL 540
>gi|399994441|ref|YP_006574681.1| hemimethylated DNA-binding protein, YccV-like protein [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
gi|400755989|ref|YP_006564357.1| hemimethylated DNA-binding protein, YccV-like protein [Phaeobacter
gallaeciensis 2.10]
gi|398655142|gb|AFO89112.1| hemimethylated DNA-binding protein, YccV-like protein [Phaeobacter
gallaeciensis 2.10]
gi|398658996|gb|AFO92962.1| hemimethylated DNA-binding protein, YccV-like protein [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
Length = 108
Score = 47.4 bits (111), Expect = 0.010, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Query: 205 RFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHA 264
R + LGQ V H+ +R V+ +DP + W E A E + QP+Y +L +
Sbjct: 5 RAKYNLGQVVRHRKHPFRGVVFDVDPEFANTEEWYE-AIPEDSRPVKDQPYYHLLAE--N 61
Query: 265 DPNILVAYVAEENLLA--SDQPDMARFDHPYISFLFYGTD 302
D VAYV+E+NL+A S +P HP I +F D
Sbjct: 62 DQTYYVAYVSEQNLIADYSGEP----VGHPDIPEMFGSFD 97
>gi|226294414|gb|EEH49834.1| F-box domain-containing protein [Paracoccidioides brasiliensis
Pb18]
Length = 572
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVL 259
E+ +++GQ H+ + Y AVI G D C WM+ +++L+ G Q FY VL
Sbjct: 483 EHKNVKYKIGQVFRHRRYDYIAVITGWDAECGAGEQWMQQMGIDRLRAGKHQSFYHVL 540
>gi|260432335|ref|ZP_05786306.1| hemimethylated DNA binding protein [Silicibacter lacuscaerulensis
ITI-1157]
gi|260416163|gb|EEX09422.1| hemimethylated DNA binding protein [Silicibacter lacuscaerulensis
ITI-1157]
Length = 126
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 210 LGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPNIL 269
LGQ V HK +R VI +DP + W + A E + QPFY +L + D +
Sbjct: 28 LGQVVRHKKHPFRGVIFDVDPEFSNTEEWYQ-AIPEDSRPIKDQPFYHLLAE--NDQSFY 84
Query: 270 VAYVAEENLLA--SDQPDMARFDHPYISFLF 298
VAYV+E+NL+ S +P DHP I +F
Sbjct: 85 VAYVSEQNLVEDRSGEP----VDHPDIPNMF 111
>gi|389691648|ref|ZP_10180442.1| hemimethylated DNA binding domain protein [Microvirga sp. WSM3557]
gi|388588631|gb|EIM28921.1| hemimethylated DNA binding domain protein [Microvirga sp. WSM3557]
Length = 109
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +GQ V H++F +R +I +DP + W ++ E ++ QPFY + + +A+
Sbjct: 8 FAIGQVVRHRVFDFRGLIFDVDPEFDNTEEWW-LSIPEDVRPRKDQPFYHLFAE-NAETE 65
Query: 268 ILVAYVAEENLLA--SDQP 284
+AYV+E+NLL SD+P
Sbjct: 66 -YIAYVSEQNLLPDLSDEP 83
>gi|86136937|ref|ZP_01055515.1| hypothetical protein MED193_14722 [Roseobacter sp. MED193]
gi|85826261|gb|EAQ46458.1| hypothetical protein MED193_14722 [Roseobacter sp. MED193]
Length = 108
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 204 ARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVH 263
R + LGQ V H+ +R V+ +DP + W E + E+ + +QPFY +L +
Sbjct: 4 TRAKYNLGQVVRHRKHPFRGVVFDVDPEFENTEEWYE-SIPEESRPVKNQPFYHLLAE-- 60
Query: 264 ADPNILVAYVAEENLLA 280
D VAYV+E+NL+A
Sbjct: 61 NDQTYYVAYVSEQNLVA 77
>gi|265989887|ref|ZP_06102444.1| hemimethylated DNA binding protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265993007|ref|ZP_06105564.1| hemimethylated DNA binding protein [Brucella melitensis bv. 3 str.
Ether]
gi|262763877|gb|EEZ09909.1| hemimethylated DNA binding protein [Brucella melitensis bv. 3 str.
Ether]
gi|263000556|gb|EEZ13246.1| hemimethylated DNA binding protein [Brucella melitensis bv. 1 str.
Rev.1]
Length = 110
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+++GQ V H++F +R VI +DP + W + E + QPFY +L +
Sbjct: 9 YQIGQVVQHRLFPFRGVIFDVDPEFANTEEWYQNIP-EDARPRRDQPFYHLLAE--NGET 65
Query: 268 ILVAYVAEENLLASDQPDMA--RFDHPYISFLFYGTDTA 304
VAYV+E+NL+ PD++ HP I +F D
Sbjct: 66 EYVAYVSEQNLV----PDLSGEPLRHPQIDEMFDRMDNG 100
>gi|265986547|ref|ZP_06099104.1| hemimethylated DNA binding protein [Brucella pinnipedialis
M292/94/1]
gi|265996239|ref|ZP_06108796.1| hemimethylated DNA binding protein [Brucella ceti M490/95/1]
gi|262550536|gb|EEZ06697.1| hemimethylated DNA binding protein [Brucella ceti M490/95/1]
gi|264658744|gb|EEZ29005.1| hemimethylated DNA binding protein [Brucella pinnipedialis
M292/94/1]
Length = 110
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+++GQ V H++F +R VI +DP + W + E + QPFY +L +
Sbjct: 9 YQIGQVVKHRLFPFRGVIFDVDPEFANTEEWYQNIP-EDARPRRDQPFYHLLAE--NGET 65
Query: 268 ILVAYVAEENLLASDQPDMA--RFDHPYISFLFYGTDTA 304
VAYV+E+NL+ PD++ HP I +F D
Sbjct: 66 EYVAYVSEQNLV----PDLSGEPLRHPQIDEMFDRMDNG 100
>gi|23500318|ref|NP_699758.1| hypothetical protein BRA0574 [Brucella suis 1330]
gi|161620636|ref|YP_001594522.1| hemimethylated DNA binding domain-containing protein [Brucella
canis ATCC 23365]
gi|163844726|ref|YP_001622381.1| hemimethylated DNA binding domain-containing protein [Brucella suis
ATCC 23445]
gi|225629069|ref|ZP_03787102.1| hemimethylated DNA binding domain-containing protein [Brucella ceti
str. Cudo]
gi|256015350|ref|YP_003105359.1| hypothetical protein BMI_II568 [Brucella microti CCM 4915]
gi|260568139|ref|ZP_05838608.1| hemimethylated DNA binding protein [Brucella suis bv. 4 str. 40]
gi|261217190|ref|ZP_05931471.1| hemimethylated DNA binding protein [Brucella ceti M13/05/1]
gi|261220410|ref|ZP_05934691.1| hemimethylated DNA binding protein [Brucella ceti B1/94]
gi|261318749|ref|ZP_05957946.1| hemimethylated DNA binding protein [Brucella pinnipedialis B2/94]
gi|261320061|ref|ZP_05959258.1| hemimethylated DNA binding protein [Brucella ceti M644/93/1]
gi|261750283|ref|ZP_05993992.1| hemimethylated DNA binding protein [Brucella suis bv. 5 str. 513]
gi|261753556|ref|ZP_05997265.1| hemimethylated DNA binding protein [Brucella suis bv. 3 str. 686]
gi|261756780|ref|ZP_06000489.1| hemimethylated DNA binding protein [Brucella sp. F5/99]
gi|265985458|ref|ZP_06098193.1| hemimethylated DNA binding protein [Brucella sp. 83/13]
gi|294853629|ref|ZP_06794301.1| hemimethylated DNA binding domain-containing protein [Brucella sp.
NVSL 07-0026]
gi|306839700|ref|ZP_07472503.1| hemimethylated DNA binding protein [Brucella sp. NF 2653]
gi|306841778|ref|ZP_07474464.1| hemimethylated DNA binding protein [Brucella sp. BO2]
gi|306845906|ref|ZP_07478474.1| hemimethylated DNA binding protein [Brucella inopinata BO1]
gi|340792358|ref|YP_004757822.1| hypothetical protein BPI_II626 [Brucella pinnipedialis B2/94]
gi|376276727|ref|YP_005152788.1| hemimethylated DNA binding protein [Brucella canis HSK A52141]
gi|376278540|ref|YP_005108573.1| hypothetical protein BSVBI22_B0568 [Brucella suis VBI22]
gi|384223101|ref|YP_005614266.1| hypothetical protein BS1330_II0569 [Brucella suis 1330]
gi|23463931|gb|AAN33763.1| conserved hypothetical protein [Brucella suis 1330]
gi|161337447|gb|ABX63751.1| hemimethylated DNA binding domain [Brucella canis ATCC 23365]
gi|163675449|gb|ABY39559.1| hemimethylated DNA binding domain [Brucella suis ATCC 23445]
gi|225615565|gb|EEH12614.1| hemimethylated DNA binding domain-containing protein [Brucella ceti
str. Cudo]
gi|255998010|gb|ACU49697.1| hypothetical protein BMI_II568 [Brucella microti CCM 4915]
gi|260154804|gb|EEW89885.1| hemimethylated DNA binding protein [Brucella suis bv. 4 str. 40]
gi|260918994|gb|EEX85647.1| hemimethylated DNA binding protein [Brucella ceti B1/94]
gi|260922279|gb|EEX88847.1| hemimethylated DNA binding protein [Brucella ceti M13/05/1]
gi|261292751|gb|EEX96247.1| hemimethylated DNA binding protein [Brucella ceti M644/93/1]
gi|261297972|gb|EEY01469.1| hemimethylated DNA binding protein [Brucella pinnipedialis B2/94]
gi|261736764|gb|EEY24760.1| hemimethylated DNA binding protein [Brucella sp. F5/99]
gi|261740036|gb|EEY27962.1| hemimethylated DNA binding protein [Brucella suis bv. 5 str. 513]
gi|261743309|gb|EEY31235.1| hemimethylated DNA binding protein [Brucella suis bv. 3 str. 686]
gi|264664050|gb|EEZ34311.1| hemimethylated DNA binding protein [Brucella sp. 83/13]
gi|294819284|gb|EFG36284.1| hemimethylated DNA binding domain-containing protein [Brucella sp.
NVSL 07-0026]
gi|306273798|gb|EFM55636.1| hemimethylated DNA binding protein [Brucella inopinata BO1]
gi|306288183|gb|EFM59570.1| hemimethylated DNA binding protein [Brucella sp. BO2]
gi|306405280|gb|EFM61556.1| hemimethylated DNA binding protein [Brucella sp. NF 2653]
gi|340560817|gb|AEK56054.1| hypothetical protein BPI_II626 [Brucella pinnipedialis B2/94]
gi|343384549|gb|AEM20040.1| hypothetical protein BS1330_II0569 [Brucella suis 1330]
gi|358259978|gb|AEU07711.1| hypothetical protein BSVBI22_B0568 [Brucella suis VBI22]
gi|363405101|gb|AEW15395.1| hemimethylated DNA binding protein [Brucella canis HSK A52141]
Length = 112
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+++GQ V H++F +R VI +DP + W + E + QPFY +L +
Sbjct: 11 YQIGQVVKHRLFPFRGVIFDVDPEFANTEEWYQNIP-EDARPRRDQPFYHLLAE--NGET 67
Query: 268 ILVAYVAEENLLASDQPDMA--RFDHPYISFLFYGTDTA 304
VAYV+E+NL+ PD++ HP I +F D
Sbjct: 68 EYVAYVSEQNLV----PDLSGEPLRHPQIDEMFDRMDNG 102
>gi|119383570|ref|YP_914626.1| hemimethylated DNA binding protein [Paracoccus denitrificans
PD1222]
gi|119373337|gb|ABL68930.1| hemimethylated DNA binding protein [Paracoccus denitrificans
PD1222]
Length = 110
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+ LGQ V H+ +R V+ +DP + W E + E + +QPFY + + A
Sbjct: 10 YNLGQVVRHREHPFRGVVFDVDPEFANTEEWYE-SIPEDSRPSRNQPFYHLYAETEA--T 66
Query: 268 ILVAYVAEENLLASDQPDMA--RFDHPYISFLF 298
VAYV+E+NL+ PD + +HP ++ +F
Sbjct: 67 YYVAYVSEQNLV----PDYSGEPLEHPEVTEMF 95
>gi|418299545|ref|ZP_12911378.1| hypothetical protein ATCR1_18500 [Agrobacterium tumefaciens
CCNWGS0286]
gi|355535010|gb|EHH04306.1| hypothetical protein ATCR1_18500 [Agrobacterium tumefaciens
CCNWGS0286]
Length = 109
Score = 47.0 bits (110), Expect = 0.013, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F LG+ V HK+F +R V+ +DP + W E ++ QPFY +L + +
Sbjct: 8 FTLGEIVRHKVFPFRGVVIDVDPEYANTEEWWNAIPAE-IRPDRDQPFYHLLAE--NEET 64
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLF 298
VAYV+E+NL+ + R +P I +F
Sbjct: 65 EYVAYVSEQNLVHDENETPLR--NPNIGRIF 93
>gi|17989038|ref|NP_541671.1| cytoplasmic protein [Brucella melitensis bv. 1 str. 16M]
gi|62317569|ref|YP_223422.1| hypothetical protein BruAb2_0650 [Brucella abortus bv. 1 str.
9-941]
gi|83269550|ref|YP_418841.1| hypothetical protein BAB2_0666 [Brucella melitensis biovar Abortus
2308]
gi|189022823|ref|YP_001932564.1| hypothetical protein BAbS19_II06230 [Brucella abortus S19]
gi|225686359|ref|YP_002734331.1| hemimethylated DNA binding domain-containing protein [Brucella
melitensis ATCC 23457]
gi|237817117|ref|ZP_04596109.1| hemimethylated DNA binding domain-containing protein [Brucella
abortus str. 2308 A]
gi|256262499|ref|ZP_05465031.1| hemimethylated DNA binding protein [Brucella melitensis bv. 2 str.
63/9]
gi|260544806|ref|ZP_05820627.1| hemimethylated DNA binding protein [Brucella abortus NCTC 8038]
gi|260564665|ref|ZP_05835150.1| hemimethylated DNA binding protein [Brucella melitensis bv. 1 str.
16M]
gi|260756663|ref|ZP_05869011.1| hemimethylated DNA binding protein [Brucella abortus bv. 6 str.
870]
gi|260760094|ref|ZP_05872442.1| hemimethylated DNA binding protein [Brucella abortus bv. 4 str.
292]
gi|260763332|ref|ZP_05875664.1| hemimethylated DNA binding protein [Brucella abortus bv. 2 str.
86/8/59]
gi|261216026|ref|ZP_05930307.1| hemimethylated DNA binding protein [Brucella abortus bv. 3 str.
Tulya]
gi|376271209|ref|YP_005114254.1| cytoplasmic protein [Brucella abortus A13334]
gi|384213084|ref|YP_005602167.1| putative cytoplasmic protein [Brucella melitensis M5-90]
gi|384410184|ref|YP_005598804.1| putative cytoplasmic protein [Brucella melitensis M28]
gi|384446711|ref|YP_005660929.1| hemimethylated DNA binding domain-containing protein [Brucella
melitensis NI]
gi|423168537|ref|ZP_17155239.1| hemimethylated DNA binding domain-containing protein [Brucella
abortus bv. 1 str. NI435a]
gi|423172030|ref|ZP_17158704.1| hemimethylated DNA binding domain-containing protein [Brucella
abortus bv. 1 str. NI474]
gi|423174239|ref|ZP_17160909.1| hemimethylated DNA binding domain-containing protein [Brucella
abortus bv. 1 str. NI486]
gi|423176116|ref|ZP_17162782.1| hemimethylated DNA binding domain-containing protein [Brucella
abortus bv. 1 str. NI488]
gi|423181459|ref|ZP_17168099.1| hemimethylated DNA binding domain-containing protein [Brucella
abortus bv. 1 str. NI010]
gi|423184592|ref|ZP_17171228.1| hemimethylated DNA binding domain-containing protein [Brucella
abortus bv. 1 str. NI016]
gi|423187742|ref|ZP_17174355.1| hemimethylated DNA binding domain-containing protein [Brucella
abortus bv. 1 str. NI021]
gi|423190163|ref|ZP_17176772.1| hemimethylated DNA binding domain-containing protein [Brucella
abortus bv. 1 str. NI259]
gi|17984880|gb|AAL53935.1| hypothetical cytosolic protein [Brucella melitensis bv. 1 str. 16M]
gi|62197762|gb|AAX76061.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82939824|emb|CAJ12832.1| conserved hypothetical protein [Brucella melitensis biovar Abortus
2308]
gi|189021397|gb|ACD74118.1| hypothetical protein BAbS19_II06230 [Brucella abortus S19]
gi|225642464|gb|ACO02377.1| hemimethylated DNA binding domain-containing protein [Brucella
melitensis ATCC 23457]
gi|237787930|gb|EEP62146.1| hemimethylated DNA binding domain-containing protein [Brucella
abortus str. 2308 A]
gi|260098077|gb|EEW81951.1| hemimethylated DNA binding protein [Brucella abortus NCTC 8038]
gi|260152308|gb|EEW87401.1| hemimethylated DNA binding protein [Brucella melitensis bv. 1 str.
16M]
gi|260670412|gb|EEX57352.1| hemimethylated DNA binding protein [Brucella abortus bv. 4 str.
292]
gi|260673753|gb|EEX60574.1| hemimethylated DNA binding protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260676771|gb|EEX63592.1| hemimethylated DNA binding protein [Brucella abortus bv. 6 str.
870]
gi|260917633|gb|EEX84494.1| hemimethylated DNA binding protein [Brucella abortus bv. 3 str.
Tulya]
gi|263092236|gb|EEZ16533.1| hemimethylated DNA binding protein [Brucella melitensis bv. 2 str.
63/9]
gi|326410731|gb|ADZ67795.1| putative cytoplasmic protein [Brucella melitensis M28]
gi|326554024|gb|ADZ88663.1| putative cytoplasmic protein [Brucella melitensis M5-90]
gi|349744708|gb|AEQ10250.1| hemimethylated DNA binding domain-containing protein [Brucella
melitensis NI]
gi|363402381|gb|AEW19350.1| putative cytoplasmic protein [Brucella abortus A13334]
gi|374536452|gb|EHR07972.1| hemimethylated DNA binding domain-containing protein [Brucella
abortus bv. 1 str. NI474]
gi|374537743|gb|EHR09253.1| hemimethylated DNA binding domain-containing protein [Brucella
abortus bv. 1 str. NI435a]
gi|374540240|gb|EHR11742.1| hemimethylated DNA binding domain-containing protein [Brucella
abortus bv. 1 str. NI486]
gi|374546049|gb|EHR17509.1| hemimethylated DNA binding domain-containing protein [Brucella
abortus bv. 1 str. NI010]
gi|374546892|gb|EHR18351.1| hemimethylated DNA binding domain-containing protein [Brucella
abortus bv. 1 str. NI016]
gi|374554718|gb|EHR26128.1| hemimethylated DNA binding domain-containing protein [Brucella
abortus bv. 1 str. NI488]
gi|374555546|gb|EHR26955.1| hemimethylated DNA binding domain-containing protein [Brucella
abortus bv. 1 str. NI021]
gi|374556203|gb|EHR27608.1| hemimethylated DNA binding domain-containing protein [Brucella
abortus bv. 1 str. NI259]
Length = 112
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+++GQ V H++F +R VI +DP + W + E + QPFY +L +
Sbjct: 11 YQIGQVVQHRLFPFRGVIFDVDPEFANTEEWYQNIP-EDARPRRDQPFYHLLAE--NGET 67
Query: 268 ILVAYVAEENLLASDQPDMA--RFDHPYISFLFYGTDTA 304
VAYV+E+NL+ PD++ HP I +F D
Sbjct: 68 EYVAYVSEQNLV----PDLSGEPLRHPQIDEMFDRMDNG 102
>gi|420238861|ref|ZP_14743233.1| hemimethylated DNA binding domain-containing protein [Rhizobium sp.
CF080]
gi|398084391|gb|EJL75077.1| hemimethylated DNA binding domain-containing protein [Rhizobium sp.
CF080]
Length = 109
Score = 47.0 bits (110), Expect = 0.013, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDV 262
NA+F +G+ V HK+F +R V+ +DP + W E ++ QPFY +L +
Sbjct: 5 NAKFT--IGEVVRHKVFPFRGVVFDVDPEFANTEEWWNSIPAE-IRPNKDQPFYHLLAE- 60
Query: 263 HADPNILVAYVAEENL 278
D VAYV+E+NL
Sbjct: 61 -NDETEYVAYVSEQNL 75
>gi|170582031|ref|XP_001895946.1| hemimethylated DNA binding domain containing protein [Brugia
malayi]
gi|158596951|gb|EDP35206.1| hemimethylated DNA binding domain containing protein [Brugia
malayi]
Length = 125
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 206 FAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQ-PFYQVLVDVHA 264
+R+G V HKI GYR VI G D SW++ + K ++ S+ P Y V++D
Sbjct: 40 IKYRVGDVVRHKIHGYRGVIIGWDEKAVAPQSWLD--KTHKGRKDWSEMPNYSVIIDTRD 97
Query: 265 DPNILVAYVAEENL 278
+AYV EEN+
Sbjct: 98 RLIPQLAYVVEENI 111
>gi|154300268|ref|XP_001550550.1| hypothetical protein BC1G_11323 [Botryotinia fuckeliana B05.10]
Length = 551
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 205 RFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVL 259
R F++GQ H+ +GY I G D C S+W+ Q++ G +Q FY VL
Sbjct: 497 RVKFKIGQVFRHQRYGYTGAIIGWDVGCHMGSNWIAQHQIDSYPGGRNQSFYHVL 551
>gi|408787092|ref|ZP_11198825.1| hypothetical protein C241_13382 [Rhizobium lupini HPC(L)]
gi|424910561|ref|ZP_18333938.1| hemimethylated DNA binding domain protein [Rhizobium leguminosarum
bv. viciae USDA 2370]
gi|392846592|gb|EJA99114.1| hemimethylated DNA binding domain protein [Rhizobium leguminosarum
bv. viciae USDA 2370]
gi|408487045|gb|EKJ95366.1| hypothetical protein C241_13382 [Rhizobium lupini HPC(L)]
Length = 109
Score = 46.6 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDV 262
NA+F LG+ V HK+F +R V+ +DP + W E ++ QPFY +L +
Sbjct: 5 NAKFT--LGEIVRHKVFPFRGVVIDVDPEYANTEEWWNAIPAE-IRPERDQPFYHLLAE- 60
Query: 263 HADPNILVAYVAEENLLASDQPDMARFDHPYISFLF 298
+ VAYV+E+NL+ + R +P I +F
Sbjct: 61 -NEETEYVAYVSEQNLVHDENETPLR--NPNIGRIF 93
>gi|149204853|ref|ZP_01881815.1| hypothetical protein RTM1035_03118 [Roseovarius sp. TM1035]
gi|149141723|gb|EDM29778.1| hypothetical protein RTM1035_03118 [Roseovarius sp. TM1035]
Length = 108
Score = 46.6 bits (109), Expect = 0.015, Method: Composition-based stats.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 205 RFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHA 264
R + LGQ V HK +R VI +DP + W + E + QPFY +L +
Sbjct: 5 RAKYHLGQVVRHKKHPFRGVIFDVDPQFSNTEEWYA-SIPEDSRPSKEQPFYHLLAE--N 61
Query: 265 DPNILVAYVAEENLLA--SDQPDMARFDHPYISFLF 298
+ + VAYV+E+NL+A S +P HP I LF
Sbjct: 62 EQSYYVAYVSEQNLVADYSGEP----VGHPDIPDLF 93
>gi|350631773|gb|EHA20144.1| hypothetical protein ASPNIDRAFT_53116 [Aspergillus niger ATCC 1015]
Length = 524
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 210 LGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVL 259
+GQ H+ + YRA+I G D C WM +++LQ G Q FY VL
Sbjct: 475 VGQVFRHRRYDYRAIITGWDTECGAGEQWMRRMGIDRLQGGRHQSFYHVL 524
>gi|345569762|gb|EGX52591.1| hypothetical protein AOL_s00007g579 [Arthrobotrys oligospora ATCC
24927]
Length = 561
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 8/78 (10%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
EN FR+G H+ + Y+AVI G + ++I + E LQ+G QPFY+V+VD
Sbjct: 452 ENRGVLFRIGTIFKHRRYNYQAVITGW--TINMAYEGLDIEEGE-LQKGLMQPFYRVMVD 508
Query: 262 VHADPNILVAYVAEENLL 279
++ + YVA+EN+L
Sbjct: 509 -----DLSIRYVAQENIL 521
>gi|402549037|ref|ZP_10845890.1| hemimethylated DNA binding protein [SAR86 cluster bacterium SAR86C]
Length = 105
Score = 46.6 bits (109), Expect = 0.016, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G V HK +R VI +DP S W + EK++ +QPFY + + +
Sbjct: 9 FSIGNIVKHKYLDFRGVIFDLDPEFNNSEEWYN-SIPEKIRPKKNQPFYHLFAE--NEDI 65
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGT 301
+AYV+E+NLL + +HP I F T
Sbjct: 66 FYIAYVSEQNLLTDESG--VPCNHPDIKKCFLNT 97
>gi|159185436|ref|NP_354756.2| conserved hypothetical protein [Agrobacterium fabrum str. C58]
gi|335036424|ref|ZP_08529751.1| hypothetical protein AGRO_3757 [Agrobacterium sp. ATCC 31749]
gi|159140684|gb|AAK87541.2| conserved hypothetical protein [Agrobacterium fabrum str. C58]
gi|333792315|gb|EGL63685.1| hypothetical protein AGRO_3757 [Agrobacterium sp. ATCC 31749]
Length = 109
Score = 46.6 bits (109), Expect = 0.018, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F LG+ V HK+F +R V+ +DP + W E ++ QPFY +L + +
Sbjct: 8 FTLGEIVRHKVFPFRGVVIDVDPEYANTEEWWNAIPAE-IRPERDQPFYHLLAE--NEET 64
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLF 298
VAYV+E+NL+ + R +P I +F
Sbjct: 65 EYVAYVSEQNLVHDENDTPLR--NPNIGRIF 93
>gi|148257178|ref|YP_001241763.1| hypothetical protein BBta_5916 [Bradyrhizobium sp. BTAi1]
gi|146409351|gb|ABQ37857.1| hypothetical protein BBta_5916 [Bradyrhizobium sp. BTAi1]
Length = 108
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 10/93 (10%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +GQ H+++ R V+ +D E W I +L + QPFY +L + + +
Sbjct: 8 FTIGQVTRHRVYDLRGVVFDVDLSFSEEEGWRAITMDARLDK--EQPFYYLLAE--SGDS 63
Query: 268 ILVAYVAEENLL--ASDQPDMARFDHPYISFLF 298
+AYV E+NLL AS +P HP I LF
Sbjct: 64 SYIAYVPEQNLLPDASGEP----VKHPDIGELF 92
>gi|392597697|gb|EIW87019.1| YccV-like-domain-containing protein [Coniophora puteana RWD-64-598
SS2]
Length = 627
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 50/131 (38%), Gaps = 21/131 (16%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G HK F Y + G D C + W+ V+ L +G QPFY VL N
Sbjct: 483 FFVGTVFRHKRFDYIGYVIGWDAKCMATEQWIVQMGVDMLSRGRHQPFYNVLTQ-----N 537
Query: 268 ILVAYVAEENLLASDQPDMARFD----HPYISFLFYGTDTAGD--FIPIKQLREKYNRPR 321
YVAEEN+ A D P F + G IP +LR Y
Sbjct: 538 GSQRYVAEENIQPIGLSGTAVRDIFVVAPQAERYFEDIEIRGKTRLIPSPELRAAY---- 593
Query: 322 YEVPTDPEDEE 332
PEDEE
Sbjct: 594 ------PEDEE 598
>gi|426201181|gb|EKV51104.1| hypothetical protein AGABI2DRAFT_189400 [Agaricus bisporus var.
bisporus H97]
Length = 242
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 53/125 (42%), Gaps = 10/125 (8%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+ +G H+ F Y A I D C +W++ V+ L +G QPFY+ +V D
Sbjct: 107 YFVGLPFKHRKFDYVACIIRWDATCKADETWIQRMGVDSLDRGRHQPFYKSVV---LDQE 163
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY-NRPRYEVPT 326
YVAEEN+ A P+ YI F + + Q+ E N R+ +
Sbjct: 164 ATQRYVAEENVEAVPLPE------NYIEQFFEKHASMAKYFQSVQVEETSGNLKRWRLVL 217
Query: 327 DPEDE 331
PE +
Sbjct: 218 SPESK 222
>gi|393244417|gb|EJD51929.1| hypothetical protein AURDEDRAFT_158772 [Auricularia delicata
TFB-10046 SS5]
Length = 622
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%)
Query: 199 LAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQV 258
L R + +GQ V H+ + Y VI D C + SW+ + V++L G QPFY+V
Sbjct: 454 LQVRTERILYAVGQIVFHRRYHYWGVIRSWDHSCTGTESWINLMDVDRLPGGRQQPFYRV 513
Query: 259 L 259
Sbjct: 514 F 514
>gi|338738770|ref|YP_004675732.1| DNA-binding protein, hemimethylated (yccV-like) [Hyphomicrobium sp.
MC1]
gi|337759333|emb|CCB65162.1| putative DNA-binding protein, hemimethylated (yccV-like)
[Hyphomicrobium sp. MC1]
Length = 110
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +GQ V H+++ +R +I +DP + W ++ E+++ QP+Y + + +A+
Sbjct: 9 FSIGQVVRHRLYPFRGLIFDIDPEFANTEEWW-LSIPEEVRPHKDQPYYHLFAE-NAETT 66
Query: 268 ILVAYVAEENLLASD 282
L AYV+E+NLL D
Sbjct: 67 YL-AYVSEQNLLLDD 80
>gi|330813416|ref|YP_004357655.1| hypothetical protein SAR11G3_00441 [Candidatus Pelagibacter sp.
IMCC9063]
gi|327486511|gb|AEA80916.1| hypothetical protein SAR11G3_00441 [Candidatus Pelagibacter sp.
IMCC9063]
Length = 110
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G+ V H++F +R VI +D S W + + + + QPFY +L + D
Sbjct: 11 FSIGEVVRHRLFEFRGVIYDVDFQFNNSDEWYQ-SIPKDARPRKDQPFYHLLAE--NDEI 67
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFI 308
AYV+E+NL+ D+ D HP ++ +F G G ++
Sbjct: 68 TYEAYVSEQNLVLDDRSDP--IGHPLLNEIFKGKTKDGLYL 106
>gi|209885325|ref|YP_002289182.1| hemimethylated DNA-binding region [Oligotropha carboxidovorans OM5]
gi|337741054|ref|YP_004632782.1| hemimethylated DNA-binding region [Oligotropha carboxidovorans OM5]
gi|386030071|ref|YP_005950846.1| hemimethylated DNA-binding region [Oligotropha carboxidovorans OM4]
gi|209873521|gb|ACI93317.1| hemimethylated DNA-binding region [Oligotropha carboxidovorans OM5]
gi|336095139|gb|AEI02965.1| hemimethylated DNA-binding region [Oligotropha carboxidovorans OM4]
gi|336098718|gb|AEI06541.1| hemimethylated DNA-binding region [Oligotropha carboxidovorans OM5]
Length = 109
Score = 46.2 bits (108), Expect = 0.021, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +GQ V H++F +R VI +D + W ++ E+L+ QPFY +L + +A+
Sbjct: 8 FHIGQIVRHRVFSFRGVIFDIDGEFNNTEEWW-LSIPEELRPEKDQPFYHLLAE-NAESE 65
Query: 268 ILVAYVAEENLLASDQPD 285
+AYV+E+NLL + D
Sbjct: 66 -YIAYVSEQNLLPDETGD 82
>gi|149910136|ref|ZP_01898783.1| Hemimethylated DNA-binding region [Moritella sp. PE36]
gi|149806861|gb|EDM66823.1| Hemimethylated DNA-binding region [Moritella sp. PE36]
Length = 110
Score = 46.2 bits (108), Expect = 0.022, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+ +G V+HK+F YR + +DP W V + + QP+Y V+V + +
Sbjct: 13 YSIGDLVHHKLFDYRGAVIDIDPYFQLPEEWY--VAVARSRPPKDQPWYHVIV----NDS 66
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLF 298
+ YVAE+NL P + +HP + LF
Sbjct: 67 TKLTYVAEQNLEVD--PSGNKINHPMVKKLF 95
>gi|407785035|ref|ZP_11132184.1| hypothetical protein B30_03300 [Celeribacter baekdonensis B30]
gi|407204737|gb|EKE74718.1| hypothetical protein B30_03300 [Celeribacter baekdonensis B30]
Length = 108
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 203 NARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDV 262
+R + LGQ V HK +R VI +D + + W + A E + QPFY +L +
Sbjct: 3 TSRAKYHLGQVVCHKQHRFRGVIFDVDAMFSNTQEWYD-AIPEDSRPHKDQPFYHLLAE- 60
Query: 263 HADPNILVAYVAEENLLAS------DQPDMARFDHPY 293
D + VAYV+E+NL+A + PD++ P+
Sbjct: 61 -NDQSYYVAYVSEQNLVADYSGVPVEHPDLSDLFGPF 96
>gi|221640989|ref|YP_002527251.1| Hemimethylated DNA binding protein [Rhodobacter sphaeroides KD131]
gi|332559963|ref|ZP_08414285.1| hemimethylated DNA binding protein [Rhodobacter sphaeroides WS8N]
gi|429206725|ref|ZP_19197989.1| hypothetical protein D516_4190 [Rhodobacter sp. AKP1]
gi|221161770|gb|ACM02750.1| Hemimethylated DNA binding protein [Rhodobacter sphaeroides KD131]
gi|332277675|gb|EGJ22990.1| hemimethylated DNA binding protein [Rhodobacter sphaeroides WS8N]
gi|428190311|gb|EKX58859.1| hypothetical protein D516_4190 [Rhodobacter sp. AKP1]
Length = 108
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+ LGQ + H+ +R V+ +D + + W + A E+ + QPFY +L + D +
Sbjct: 8 YHLGQVLRHRKHPFRGVVFDVDAMFANTEEWYD-AIPEESRPSRDQPFYHLLAE--NDQS 64
Query: 268 ILVAYVAEENLLASD------QPDMA 287
VAYV+E+NL+ D PD+A
Sbjct: 65 YYVAYVSEQNLVPDDTGEPVEHPDLA 90
>gi|146342277|ref|YP_001207325.1| hypothetical protein BRADO5431 [Bradyrhizobium sp. ORS 278]
gi|146195083|emb|CAL79108.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
Length = 108
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +GQ H+++ R V+ +D E W I +L + QPFY +L + + +
Sbjct: 8 FTIGQVARHRVYDLRGVVFDVDLSFSEEEGWRAITMDARLDK--EQPFYYLLAE--SGDS 63
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDF 307
+AYV E+NL+A + + HP I LF D G +
Sbjct: 64 SYIAYVPEQNLIADASGEPVK--HPDIGELF-DVDDGGSY 100
>gi|359407354|ref|ZP_09199831.1| hemimethylated DNA binding domain protein [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356677393|gb|EHI49737.1| hemimethylated DNA binding domain protein [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 113
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G V H+++ +R VI +DP + W + E ++ QPFY +L + +AD +
Sbjct: 12 FCIGDIVRHRLYPFRGVIVDVDPEFDNTEEWY-ASIPEDVRPDREQPFYHLLAE-NAD-S 68
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYG 300
AYV+++NLL+ D+ HP I +F G
Sbjct: 69 YYSAYVSQQNLLSDDE--NGPVGHPDIEDVFTG 99
>gi|313231121|emb|CBY19119.1| unnamed protein product [Oikopleura dioica]
Length = 261
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
FR+GQ HK GY V+ G D C ++W + + QPFY VL D
Sbjct: 143 FRVGQVFKHKTLGYYGVVVGWDETCKAPAAWQQQMLGANWKIKCQQPFYAVLTS-SGDSR 201
Query: 268 ILVAYVAEENLL 279
YV EEN++
Sbjct: 202 ----YVMEENII 209
>gi|77462036|ref|YP_351540.1| hypothetical protein RSP_1498 [Rhodobacter sphaeroides 2.4.1]
gi|126460926|ref|YP_001042040.1| hemimethylated DNA binding protein [Rhodobacter sphaeroides ATCC
17029]
gi|77386454|gb|ABA77639.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
gi|126102590|gb|ABN75268.1| hemimethylated DNA binding protein [Rhodobacter sphaeroides ATCC
17029]
Length = 121
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+ LGQ + H+ +R V+ +D + + W + A E+ + QPFY +L + D +
Sbjct: 21 YHLGQVLRHRKHPFRGVVFDVDAMFANTEEWYD-AIPEESRPSRDQPFYHLLAE--NDQS 77
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLF 298
VAYV+E+NL+ D + +HP ++ LF
Sbjct: 78 YYVAYVSEQNLVPDDTGEPV--EHPDLAELF 106
>gi|325293157|ref|YP_004279021.1| hypothetical protein AGROH133_06759 [Agrobacterium sp. H13-3]
gi|418408418|ref|ZP_12981734.1| hypothetical protein AT5A_14392 [Agrobacterium tumefaciens 5A]
gi|325061010|gb|ADY64701.1| hypothetical protein AGROH133_06759 [Agrobacterium sp. H13-3]
gi|358005332|gb|EHJ97658.1| hypothetical protein AT5A_14392 [Agrobacterium tumefaciens 5A]
Length = 109
Score = 45.8 bits (107), Expect = 0.026, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F LG+ V HK+F +R V+ +DP + W + ++ QPFY +L + D
Sbjct: 8 FTLGEIVRHKVFPFRGVVIDVDPEYANTEEWWNAIPAD-IRPERDQPFYHLLAE--NDET 64
Query: 268 ILVAYVAEENLL 279
VAYV+E+NL+
Sbjct: 65 EYVAYVSEQNLV 76
>gi|398378742|ref|ZP_10536898.1| hemimethylated DNA binding domain-containing protein [Rhizobium sp.
AP16]
gi|397724394|gb|EJK84865.1| hemimethylated DNA binding domain-containing protein [Rhizobium sp.
AP16]
Length = 109
Score = 45.8 bits (107), Expect = 0.026, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G V H++F +R VI +DP + W +E ++ QPFY +L + D
Sbjct: 8 FNIGDVVRHRMFPFRGVIFDVDPEFANTEEWWNSIPME-VRPSKDQPFYHLLAE--NDET 64
Query: 268 ILVAYVAEENLL 279
VAYV+E+NL+
Sbjct: 65 EYVAYVSEQNLI 76
>gi|88811014|ref|ZP_01126270.1| Hemimethylated DNA-binding region [Nitrococcus mobilis Nb-231]
gi|88791553|gb|EAR22664.1| Hemimethylated DNA-binding region [Nitrococcus mobilis Nb-231]
Length = 104
Score = 45.8 bits (107), Expect = 0.028, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 12/93 (12%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +GQ V+H +F YR VI +DPV + W E+ + + + +P+Y VLV +A+
Sbjct: 7 FTIGQLVHHTLFDYRGVIVDVDPVFQGTEEWYEM--MARSRPPKDKPWYHVLVH-NANHG 63
Query: 268 ILVAYVAEENLLASDQPDMA--RFDHPYISFLF 298
YVAE +L +PD + + +HP ++ +F
Sbjct: 64 ---TYVAERHL----EPDESAEQINHPALNEIF 89
>gi|7509185|pir||T26319 hypothetical protein W09G3.3 - Caenorhabditis elegans
Length = 522
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 5/115 (4%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
FR+G + H +R VI G D ++++A E + +QP Y VL+D
Sbjct: 44 FRVGDVITHTKLNFRGVIIGWDEHAIAPEKFLKVAHGEN-KNYATQPNYAVLIDTRDRLT 102
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKYNRPRY 322
++Y+ +ENL + D HP + F G D + ++ ++ R+
Sbjct: 103 PQLSYIVQENL----EIDKGTVMHPLVDKFFDGFDEKRQKLVTSKMISRWQTTRF 153
>gi|261323183|ref|ZP_05962380.1| hemimethylated DNA binding protein [Brucella neotomae 5K33]
gi|261299163|gb|EEY02660.1| hemimethylated DNA binding protein [Brucella neotomae 5K33]
Length = 110
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+++G+ V H++F +R VI +DP + W + E + QPFY +L +
Sbjct: 9 YQIGRVVKHRLFPFRGVIFDVDPEFANTEEWYQNIP-EDARPRRDQPFYHLLAE--NGET 65
Query: 268 ILVAYVAEENLLASDQPDMA--RFDHPYISFLFYGTDTA 304
VAYV+E+NL+ PD++ HP I +F D
Sbjct: 66 EYVAYVSEQNLV----PDLSGEPLRHPQIDEMFDRMDNG 100
>gi|221483819|gb|EEE22131.1| ubiquitin carboxyl-terminal hydrolase, putative [Toxoplasma gondii
GT1]
Length = 4302
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 5/108 (4%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHA-- 264
AFR+G+ V H+ Y AV+ D C W + +P Y +LVD A
Sbjct: 4143 AFRVGRLVRHRWSKYTAVVLSWDRSCEAPPDWTAKVYEHYPESSSHKPHYLLLVDQAAVR 4202
Query: 265 DPNI-LVAYVAEENLLASDQPDMARFDHPYISFLFYGTDT-AGDFIPI 310
+P + L AYV E L + F HP S+ F+ T +G F+P+
Sbjct: 4203 EPQLPLFAYVPEVALEPAPA-GQGLFRHPLTSYFFHHFSTHSGHFVPL 4249
>gi|341886903|gb|EGT42838.1| hypothetical protein CAEBREN_02906 [Caenorhabditis brenneri]
Length = 200
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 5/110 (4%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
FR+G V+HK+ YR VI G DP + ++++ E + +Q Y +L+D
Sbjct: 92 FRVGDIVSHKVQDYRGVIIGWDPEAIATEAFIKHV-YEGKEHLINQHTYAILIDTRDRLT 150
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
V YV++ENL Q + HP + F G D ++ L KY
Sbjct: 151 PQVGYVSQENL----QIEKGTVLHPLVEKFFDGFDEKRQKYMLRPLYRKY 196
>gi|237843871|ref|XP_002371233.1| ubiquitin carboxyl-terminal hydrolase, putative [Toxoplasma gondii
ME49]
gi|211968897|gb|EEB04093.1| ubiquitin carboxyl-terminal hydrolase, putative [Toxoplasma gondii
ME49]
Length = 4302
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 5/108 (4%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHA-- 264
AFR+G+ V H+ Y AV+ D C W + +P Y +LVD A
Sbjct: 4143 AFRVGRLVRHRWSKYTAVVLSWDRSCEAPPDWTAKVYEHYPESSSHKPHYLLLVDQAAVR 4202
Query: 265 DPNI-LVAYVAEENLLASDQPDMARFDHPYISFLFYGTDT-AGDFIPI 310
+P + L AYV E L + F HP S+ F+ T +G F+P+
Sbjct: 4203 EPQLPLFAYVPEVALEPAPA-GQGLFRHPLTSYFFHHFSTHSGHFVPL 4249
>gi|456353836|dbj|BAM88281.1| conserved hypothetical protein [Agromonas oligotrophica S58]
Length = 108
Score = 45.4 bits (106), Expect = 0.035, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +GQ H+++ R V+ +D E W I+ +L + QPFY +L + + +
Sbjct: 8 FTIGQVTRHRVYDLRGVVFDVDLSFSEGEGWRAISMDARLDK--EQPFYYLLAE--SGES 63
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAG 305
+AYV E+NL+A + + HP I LF D G
Sbjct: 64 SYIAYVPEQNLVADVTGEPVK--HPDIGELFDVDDGGG 99
>gi|221504182|gb|EEE29857.1| hypothetical protein TGVEG_008740 [Toxoplasma gondii VEG]
Length = 4307
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 5/108 (4%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHA-- 264
AFR+G+ V H+ Y AV+ D C W + +P Y +LVD A
Sbjct: 4148 AFRVGRLVRHRWSKYTAVVLSWDRSCEAPPDWTAKVYEHYPESSSHKPHYLLLVDQAAVR 4207
Query: 265 DPNI-LVAYVAEENLLASDQPDMARFDHPYISFLFYGTDT-AGDFIPI 310
+P + L AYV E L + F HP S+ F+ T +G F+P+
Sbjct: 4208 EPQLPLFAYVPEVALEPAPA-GQGLFRHPLTSYFFHHFSTHSGHFVPL 4254
>gi|424863694|ref|ZP_18287606.1| hemimethylated DNA binding protein [SAR86 cluster bacterium SAR86A]
gi|400757015|gb|EJP71227.1| hemimethylated DNA binding protein [SAR86 cluster bacterium SAR86A]
Length = 110
Score = 45.4 bits (106), Expect = 0.037, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G V HK +R VI +DP + W + + + QPFY V + +
Sbjct: 9 FSIGNVVKHKFLNFRGVIFDLDPSFNNTEEWYN-SIPKDFRPKKDQPFYHVFAE--NEEI 65
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIP 309
+AYV+E+NL+ D + +HP I +F D +IP
Sbjct: 66 FYIAYVSEQNLI--DDVESGPANHPDIKKIFSHFD-GNSYIP 104
>gi|260882480|ref|ZP_05894094.1| hemimethylated DNA binding protein [Brucella abortus bv. 9 str.
C68]
gi|260872008|gb|EEX79077.1| hemimethylated DNA binding protein [Brucella abortus bv. 9 str.
C68]
Length = 110
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+++GQ V H++F +R VI +DP W + E + QPFY +L +
Sbjct: 9 YQIGQVVQHRLFPFRGVIFDVDPEFANIEEWYQNIP-EDARPRRDQPFYHLLAE--NGET 65
Query: 268 ILVAYVAEENLLASDQPDMA--RFDHPYISFLFYGTDTA 304
VAYV+E+NL+ PD++ HP I +F D
Sbjct: 66 EYVAYVSEQNLV----PDLSGEPLRHPQIDEMFDRMDNG 100
>gi|443705935|gb|ELU02231.1| hypothetical protein CAPTEDRAFT_213768 [Capitella teleta]
Length = 585
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 48/112 (42%), Gaps = 10/112 (8%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + H+ + Y VI G D C S SW+ V L Q QPFY VLV +
Sbjct: 463 CYSVGLVMVHRRYDYSCVIYGWDETCKASESWIIQMGVNNLPQKQFQPFYNVLVSDGSS- 521
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGD-FIPIKQLREKY 317
Y A+ENL S P D Y D G+ ++ QLR +Y
Sbjct: 522 ----RYAAQENLRLSLNPTEITND----EIGRYFQDFTGEYYVANDQLRGRY 565
>gi|336364774|gb|EGN93128.1| hypothetical protein SERLA73DRAFT_78970 [Serpula lacrymans var.
lacrymans S7.3]
Length = 572
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 7/93 (7%)
Query: 187 LEAESLAASATALAFENAR-FAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVE 245
L +E A+++ L + + F +G H Y I G P C S W+ V+
Sbjct: 419 LRSEENASTSIKLRSQQVKNIKFFVGMMFKHIKLAYVGCIIGWAPTCMASEDWIIQGGVD 478
Query: 246 KLQQGPSQPFYQVLVDVHADPNILVAYVAEENL 278
+G QPFY V+ D YVAEEN+
Sbjct: 479 AFPRGRHQPFYTVIFDNSTR------YVAEENI 505
>gi|297249609|ref|ZP_06933310.1| hypothetical protein BAYG_02368 [Brucella abortus bv. 5 str. B3196]
gi|297173478|gb|EFH32842.1| hypothetical protein BAYG_02368 [Brucella abortus bv. 5 str. B3196]
Length = 112
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+++GQ V H++F +R VI +DP W + E + QPFY +L +
Sbjct: 11 YQIGQVVQHRLFPFRGVIFDVDPEFANIEEWYQNIP-EDARPRRDQPFYHLLAE--NGET 67
Query: 268 ILVAYVAEENLLASDQPDMA--RFDHPYISFLFYGTDTA 304
VAYV+E+NL+ PD++ HP I +F D
Sbjct: 68 EYVAYVSEQNLV----PDLSGEPLRHPQIDEMFDRMDNG 102
>gi|296446405|ref|ZP_06888349.1| hemimethylated DNA binding protein [Methylosinus trichosporium
OB3b]
gi|296256040|gb|EFH03123.1| hemimethylated DNA binding protein [Methylosinus trichosporium
OB3b]
Length = 110
Score = 45.4 bits (106), Expect = 0.041, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +GQ V H+ + +R VI +DP + W ++ E+++ QPFY + +
Sbjct: 9 FAIGQVVKHRRYPFRGVIYDVDPEFANTEEWW-LSIPEEVRPRKDQPFYHLFAE--NSET 65
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLF 298
VAYV+E+NL+ + D R HP + F
Sbjct: 66 EYVAYVSEQNLVPDESGDPVR--HPQVDETF 94
>gi|365886164|ref|ZP_09425125.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
gi|365338357|emb|CCD97656.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
Length = 108
Score = 45.1 bits (105), Expect = 0.043, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +GQ H+++ R V+ +D E W I ++L + QPFY +L + + +
Sbjct: 8 FTIGQVTRHRVYDLRGVVFDVDLSFSEEEGWRAITMDKRLDK--EQPFYYLLAE--SGDS 63
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDF 307
+AYV E+NL+A + + HP I LF D +G +
Sbjct: 64 SYIAYVPEQNLVADASGEPVK--HPDIGELF-DVDDSGSY 100
>gi|50120693|ref|YP_049860.1| heat shock protein HspQ [Pectobacterium atrosepticum SCRI1043]
gi|81645404|sp|Q6D6C5.1|HSPQ_ERWCT RecName: Full=Heat shock protein HspQ
gi|49611219|emb|CAG74665.1| conserved hypothetical protein [Pectobacterium atrosepticum
SCRI1043]
Length = 102
Score = 45.1 bits (105), Expect = 0.046, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLV-DVHAD 265
F LGQ++ HK+ G+ VI +DP E+ +W EI+ + + S+P+Y V++ D
Sbjct: 6 FGLGQQIRHKLLGFPGVIIDIDPEYSLETPTWEEISGNDTPR---SEPWYHVVMEDNEGQ 62
Query: 266 PNILVAYVAEENLLASDQPDMARFDHPYISFL 297
P + Y+AE +L+ + +++ DHP ++ L
Sbjct: 63 P--MHTYLAEAHLM---KEELSEHDHPSLNEL 89
>gi|408379640|ref|ZP_11177233.1| hypothetical protein QWE_18649 [Agrobacterium albertimagni AOL15]
gi|407746451|gb|EKF57974.1| hypothetical protein QWE_18649 [Agrobacterium albertimagni AOL15]
Length = 109
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G V HK F +R VI +DP S W E ++ QPFY +L +
Sbjct: 8 FGIGDVVRHKFFPFRGVIFDVDPEFANSEEWWNAIPAE-VRPHKDQPFYHLLAE--NSET 64
Query: 268 ILVAYVAEENL 278
VAYV+E+NL
Sbjct: 65 EYVAYVSEQNL 75
>gi|50744786|ref|XP_419873.1| PREDICTED: uncharacterized protein LOC421856 [Gallus gallus]
Length = 239
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 7/133 (5%)
Query: 188 EAES---LAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQV 244
EAE+ AAS + + F +GQ + HK FGY VI G D W++
Sbjct: 108 EAENHSYFAASPHVHSPKPESIQFSVGQVIVHKRFGYSGVIVGWDVKAKAPEEWLQHKYP 167
Query: 245 EKLQQGPSQPFYQVLVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTA 304
+ Q P Y++L++ + AYV EE + + + HP + F G D
Sbjct: 168 PEKQDVKDTPHYRILINNASGFGKSTAYVPEEEIKTTVG---LQVHHPDVKVYFCGYD-G 223
Query: 305 GDFIPIKQLREKY 317
+I LR+ Y
Sbjct: 224 SKYILQPWLRDIY 236
>gi|260574470|ref|ZP_05842474.1| hemimethylated DNA binding protein [Rhodobacter sp. SW2]
gi|259023366|gb|EEW26658.1| hemimethylated DNA binding protein [Rhodobacter sp. SW2]
Length = 108
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 11/100 (11%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+ LGQ + H+ +R V+ +D + + W E E + QPFY +L + D +
Sbjct: 8 YHLGQVLRHRKHPFRGVVFDVDAMFSNTEEWYENIPEESRPRR-DQPFYHLLAE--NDQS 64
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDF 307
VAYV+E+NL+ + + DHP + LF GDF
Sbjct: 65 YYVAYVSEQNLVPDETGEPV--DHPDLGDLF------GDF 96
>gi|409083760|gb|EKM84117.1| hypothetical protein AGABI1DRAFT_110698 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 242
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 53/125 (42%), Gaps = 10/125 (8%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+ +G H+ F Y A I D C +W++ V+ L +G QPFY+ +V D
Sbjct: 107 YFVGLPFKHRKFDYVACIIRWDATCKADETWIQRMGVDSLDRGRHQPFYKSVV---LDQE 163
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY-NRPRYEVPT 326
YVAE+N+ A P+ YI F + + Q+ E N R+ +
Sbjct: 164 ATQRYVAEDNVEAVPLPE------NYIEQFFEKHASMAKYFQSVQVEETSGNLKRWRLVL 217
Query: 327 DPEDE 331
PE +
Sbjct: 218 SPESK 222
>gi|242814624|ref|XP_002486405.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218714744|gb|EED14167.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 534
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLV 260
E+ +R+GQ H+ + Y+AVI G D C + WM +++L+ G Q FY L+
Sbjct: 464 EHQNVKYRVGQVFIHRRYEYQAVITGWDAECDANEEWMRRMGIDQLRAGRKQSFYHALL 522
>gi|341875401|gb|EGT31336.1| hypothetical protein CAEBREN_25736 [Caenorhabditis brenneri]
Length = 186
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
FR+G V+HK+ YR VI G DP + ++++ E + +Q Y +L+D
Sbjct: 92 FRVGDIVSHKVQDYRGVIIGWDPEAIATDAFIKHV-YEGKEHLINQHTYAILIDTRDRLT 150
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTD 302
V YV++ENL Q + HP + F G D
Sbjct: 151 PQVGYVSQENL----QLEKGTVLHPLVEKFFDGFD 181
>gi|148558617|ref|YP_001257563.1| hemimethylated DNA-binding region [Brucella ovis ATCC 25840]
gi|148369902|gb|ABQ62774.1| hemimethylated DNA-binding region [Brucella ovis ATCC 25840]
Length = 112
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+++GQ V H++F +R VI +DP + W + E + QPFY +L +
Sbjct: 11 YQIGQVVKHRLFPFRGVIFDVDPEFANTEEWYQNIP-EDARPRRDQPFYHLLAE--NGET 67
Query: 268 ILVAYVAEENLLASDQPDMA--RFDHPYI 294
VAYV+E+NL+ PD++ HP I
Sbjct: 68 EYVAYVSEQNLV----PDLSGEPLRHPQI 92
>gi|294083582|ref|YP_003550339.1| hemimethylated DNA binding protein [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292663154|gb|ADE38255.1| hemimethylated DNA binding protein [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 109
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G V H+++ +R V+ +DP S W E + QPFY +L + +AD +
Sbjct: 8 FSIGAIVRHRLYPFRGVVVDVDPEFDNSEEWYNSIPAEARPEK-DQPFYHLLAE-NAD-S 64
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLF 298
AYV+++NLLA + HP I +F
Sbjct: 65 YYTAYVSQQNLLADGE--NGPVGHPDIDEVF 93
>gi|315499630|ref|YP_004088433.1| hemimethylated DNA binding protein [Asticcacaulis excentricus CB
48]
gi|315417642|gb|ADU14282.1| hemimethylated DNA binding protein [Asticcacaulis excentricus CB
48]
Length = 126
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 193 AASATALAFENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPS 252
A T ARF +GQ V H +F +R V+ +DP ++ W+ +A E ++
Sbjct: 12 GAYVTGGGDRAARFG--IGQLVRHVLFDFRGVVFDIDPQFSDTEEWL-MAIPEAVRPEKD 68
Query: 253 QPFYQVLVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLF 298
QPFY +L + + D VAY +E N L D+ M HP +F
Sbjct: 69 QPFYHLLAE-NGD-ICYVAYASEGN-LCPDETGMP-LRHPQTDLIF 110
>gi|298291685|ref|YP_003693624.1| hemimethylated DNA binding protein [Starkeya novella DSM 506]
gi|296928196|gb|ADH89005.1| hemimethylated DNA binding protein [Starkeya novella DSM 506]
Length = 110
Score = 44.7 bits (104), Expect = 0.060, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+R+GQ V H+ + +R V+ +DP + W E + E ++ QPFY +L + +A+
Sbjct: 9 YRIGQIVRHRHYPFRGVVFDVDPEFANTDEWWE-SIPEHIRPTKDQPFYHLLAE-NAETE 66
Query: 268 ILVAYVAEENLLASDQPDMA 287
VAYV+E+NL +PD +
Sbjct: 67 -YVAYVSEQNL----EPDTS 81
>gi|242240107|ref|YP_002988288.1| heat shock protein HspQ [Dickeya dadantii Ech703]
gi|242132164|gb|ACS86466.1| hemimethylated DNA binding protein [Dickeya dadantii Ech703]
Length = 102
Score = 44.7 bits (104), Expect = 0.068, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ++ HK+ GY V+ +DP E W E+A + L+ P ++ V+ D P
Sbjct: 6 FAIGQQIRHKLLGYPGVVIDIDPEYSLEQPKWEELATNDTLRTAPW--YHVVMEDKEGHP 63
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFL 297
+ Y+AEE L+ + + DHP + L
Sbjct: 64 --IHTYLAEEQLM---DETLNQSDHPSLDEL 89
>gi|367472273|ref|ZP_09471856.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
gi|365275357|emb|CCD84324.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
Length = 108
Score = 44.7 bits (104), Expect = 0.069, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +GQ H+++ R V+ +D E W I ++L + QPFY +L + +
Sbjct: 8 FTIGQVTRHRVYDLRGVVFDVDLSFSEEEGWRAITMDKRLDK--EQPFYYLLAE--CGDS 63
Query: 268 ILVAYVAEENLLA--SDQPDMARFDHPYISFLFYGTDTAGDF 307
+AYV E+NL+A S +P HP I LF D G +
Sbjct: 64 SYIAYVPEQNLVADVSGEP----VKHPDIGELF-DVDDGGSY 100
>gi|271501505|ref|YP_003334531.1| hemimethylated DNA-binding protein [Dickeya dadantii Ech586]
gi|270345060|gb|ACZ77825.1| hemimethylated DNA binding protein [Dickeya dadantii Ech586]
Length = 102
Score = 44.3 bits (103), Expect = 0.072, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ++ HK+ GY V+ +DP W E++ + L+ P ++ V+ D H P
Sbjct: 6 FTIGQQIRHKLLGYPGVVIDIDPEYSLAQPKWEELSVNDTLRTAPW--YHVVMEDEHGRP 63
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFL 297
+ Y+AEE L+ ++ P+ + DHP + L
Sbjct: 64 --IHTYLAEEQLI-NEGPNPS--DHPSLDEL 89
>gi|71992585|ref|NP_001021670.1| Protein TAG-229 [Caenorhabditis elegans]
gi|31441798|emb|CAD92380.1| Protein TAG-229 [Caenorhabditis elegans]
Length = 200
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 15/117 (12%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
FR+G + H +R VI G D ++++A E + +QP Y VL+D
Sbjct: 92 FRVGDVITHTKLNFRGVIIGWDEHAIAPEKFLKVAHGEN-KNYATQPNYAVLIDTRDRLT 150
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY-NRPRYE 323
++Y+ +ENL + D HP + F G D + R+KY RP Y+
Sbjct: 151 PQLSYIVQENL----EIDKGTVMHPLVDKFFDGFD---------EKRQKYIMRPLYK 194
>gi|354597031|ref|ZP_09015048.1| hemimethylated DNA binding protein [Brenneria sp. EniD312]
gi|353674966|gb|EHD20999.1| hemimethylated DNA binding protein [Brenneria sp. EniD312]
Length = 102
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ++ HK+ GY V+ +DP E+ +W E+ ++L+ + P+Y V+++ A
Sbjct: 6 FGIGQQIRHKLLGYPGVVIDIDPEYSLEAPAWEELDAQDRLR---TAPWYHVVMEDGAGR 62
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFL 297
I Y+AE L+ + R DHP + L
Sbjct: 63 PIHT-YLAEAQLIKEES---YRGDHPSLDEL 89
>gi|390357819|ref|XP_003729108.1| PREDICTED: uncharacterized protein LOC100888448 isoform 2
[Strongylocentrotus purpuratus]
Length = 243
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 3/97 (3%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
FR+GQ V HK GYR VI G D + W+ +QP Y +LV +
Sbjct: 134 FRIGQVVRHKRLGYRGVIVGWDLTAKAPAQWLSDNIPRDQIHYRNQPNYMLLVHSLDKQS 193
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTA 304
AY+ +E LL Q + HP + F D +
Sbjct: 194 FTTAYITQE-LLQGVQ--HVKVQHPQVDEYFTAYDGS 227
>gi|452752400|ref|ZP_21952143.1| Hemimethylated DNA-binding region protein [alpha proteobacterium
JLT2015]
gi|451960476|gb|EMD82889.1| Hemimethylated DNA-binding region protein [alpha proteobacterium
JLT2015]
Length = 117
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +G V H+ + +R +I +DP S W + + E ++ QP+Y +L D +
Sbjct: 15 TFGIGDVVKHRFYPFRGIIFDVDPEFANSEEWYQ-SIPEDVRPIREQPYYHLLADNGQE- 72
Query: 267 NILVAYVAEENLLASDQ 283
VAYV+++NLL ++
Sbjct: 73 -AYVAYVSQQNLLTDEE 88
>gi|163796289|ref|ZP_02190250.1| hypothetical protein BAL199_19011 [alpha proteobacterium BAL199]
gi|159178431|gb|EDP62973.1| hypothetical protein BAL199_19011 [alpha proteobacterium BAL199]
Length = 149
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP- 266
F LG V H++ +R V+ +D + W E + E ++ QPFY +L + +P
Sbjct: 49 FSLGAIVRHRLHDFRGVVFDIDAEFANTEEWYE-SIPEHMRPRRDQPFYHLLAE---NPE 104
Query: 267 NILVAYVAEENLL--ASDQPDMARFDHPYISFLF 298
+ VAYV+E+NL+ A++ P DHP + F
Sbjct: 105 SYYVAYVSEQNLVEDATNGP----VDHPKVPEFF 134
>gi|146278935|ref|YP_001169094.1| hemimethylated DNA binding protein [Rhodobacter sphaeroides ATCC
17025]
gi|145557176|gb|ABP71789.1| hemimethylated DNA binding protein [Rhodobacter sphaeroides ATCC
17025]
Length = 121
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+ LGQ + H+ +R V+ +D + + W + A E+ + QPFY +L + + +
Sbjct: 21 YHLGQVLRHRKHPFRGVVFDVDAMFSNTEEWYD-AIPEESRPSRDQPFYHLLAE--NEQS 77
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLF 298
VAYV+E+NL+ D + +HP ++ LF
Sbjct: 78 YYVAYVSEQNLVPDDTGEPV--EHPDLAELF 106
>gi|410447836|ref|ZP_11301928.1| hemimethylated DNA binding domain protein [SAR86 cluster bacterium
SAR86E]
gi|409979416|gb|EKO36178.1| hemimethylated DNA binding domain protein [SAR86 cluster bacterium
SAR86E]
Length = 114
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G V H+ +R VI +DP + W + + ++ +QPFY + +
Sbjct: 13 FAIGAIVKHRFLDFRGVIFDVDPEFNNTEEWYQ-SIPTSIRPRKNQPFYHLFAE--NGQI 69
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPI 310
VAYV+E+NL++ ++ + HP I +F + G F+P+
Sbjct: 70 FYVAYVSEQNLISDVSEELPK--HPEIKNIFSHFED-GKFVPL 109
>gi|254456312|ref|ZP_05069741.1| putative hemimethylated DNA binding domain protein [Candidatus
Pelagibacter sp. HTCC7211]
gi|207083314|gb|EDZ60740.1| putative hemimethylated DNA binding domain protein [Candidatus
Pelagibacter sp. HTCC7211]
Length = 106
Score = 43.9 bits (102), Expect = 0.093, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G V HK F +R VI +D S W + + + ++ QPFY +L + D
Sbjct: 8 FSIGDIVKHKHFEFRGVIYDVDFEFNNSEEWYQ-SIPKNVRPRKDQPFYHLLAE--NDEI 64
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYG 300
AYV+E+NLL D + + HP I +F G
Sbjct: 65 TYEAYVSEQNLLMDDSDEPIK--HPLIEEIFSG 95
>gi|307109790|gb|EFN58027.1| hypothetical protein CHLNCDRAFT_142233 [Chlorella variabilis]
Length = 271
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 15/122 (12%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +GQ HK +G+R V+ G D C W V Q P QPFY L D
Sbjct: 117 FAVGQVFIHKKYGFRGVVYGWDRECQRDEDWQRAMNV----QHPHQPFYYCLPDETDCVR 172
Query: 268 I-----LVAYVAEENLLASDQPDMARFDHPYI-SFLFYGTDTAGDFIPIKQLREKYNRPR 321
+ + YVA++N+ QP +R H + ++ + + +IP ++L+ +Y R
Sbjct: 173 LFGGVRITKYVAQDNI----QPIDSRIVHRALDNYFSSYSASRSRYIPCRKLQYEYP-DR 227
Query: 322 YE 323
YE
Sbjct: 228 YE 229
>gi|340028894|ref|ZP_08664957.1| hemimethylated DNA binding protein [Paracoccus sp. TRP]
Length = 110
Score = 43.9 bits (102), Expect = 0.098, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+ LGQ V H+ +R V+ +DP + W E + E + +QPFY + + A
Sbjct: 10 YNLGQVVRHREHPFRGVVFDVDPEFSNTEEWYE-SIPEDSRPARNQPFYHLYAETEA--T 66
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLF 298
VAYV+E+NL+ + + +HP + +F
Sbjct: 67 YYVAYVSEQNLVPDNSGE--PLEHPEVMEMF 95
>gi|407799831|ref|ZP_11146709.1| hemimethylated DNA binding protein [Oceaniovalibus guishaninsula
JLT2003]
gi|407058308|gb|EKE44266.1| hemimethylated DNA binding protein [Oceaniovalibus guishaninsula
JLT2003]
Length = 108
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 12/88 (13%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F LGQ V H+ +R VI +D + W A E + QPFY +L + D +
Sbjct: 8 FHLGQIVRHRKHPFRGVIFDVDATFSNTEEWY-AAIPEDSRPRRDQPFYHLLAE--NDDS 64
Query: 268 ILVAYVAEENLLA---------SDQPDM 286
VAYV+E+NL+ D PDM
Sbjct: 65 FYVAYVSEQNLVPDESGMPVGHPDLPDM 92
>gi|84683896|ref|ZP_01011798.1| hypothetical protein 1099457000262_RB2654_15646 [Maritimibacter
alkaliphilus HTCC2654]
gi|84667649|gb|EAQ14117.1| hypothetical protein RB2654_15646 [Rhodobacterales bacterium
HTCC2654]
Length = 108
Score = 43.9 bits (102), Expect = 0.10, Method: Composition-based stats.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 15/102 (14%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+ LGQ V H+ +R VI +D + + W + A E+ + QPFY +L + D
Sbjct: 8 YHLGQIVRHRKHPFRGVIFDVDAMFSNTQEWYD-AIPEESRPPKDQPFYHLLAE--NDQT 64
Query: 268 ILVAYVAEENLLA--SDQPDMARFDHPYISFLFYGTDTAGDF 307
VAYV+E+NL+ S +P HP + LF GDF
Sbjct: 65 YYVAYVSEQNLVEDYSGEP----VTHPDVEDLF------GDF 96
>gi|262277859|ref|ZP_06055652.1| hemimethylated DNA binding protein [alpha proteobacterium HIMB114]
gi|262224962|gb|EEY75421.1| hemimethylated DNA binding protein [alpha proteobacterium HIMB114]
Length = 110
Score = 43.9 bits (102), Expect = 0.11, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G+ V H++F +R +I +D S W + + + ++ QPFY +L + D
Sbjct: 11 FSIGEVVRHRLFEFRGIIYDVDFEFNNSEEWYQ-SIPKDVRPRKDQPFYHILAE--NDEI 67
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFI 308
AYV+E+NL+ D+ + HP + +F G G ++
Sbjct: 68 TYEAYVSEQNLVLDDRNEPV--GHPLVKEIFNGQGKDGLYL 106
>gi|365885789|ref|ZP_09424774.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
gi|365285558|emb|CCD97305.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
Length = 108
Score = 43.9 bits (102), Expect = 0.12, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 11/102 (10%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +GQ H+++ R V+ +D E W I +L + QPFY +L + +
Sbjct: 8 FTIGQVTRHRVYDLRGVVFDVDLSFSEEEGWRAITMDARLDK--EQPFYYLLAE--CGDS 63
Query: 268 ILVAYVAEENLLA--SDQPDMARFDHPYISFLFYGTDTAGDF 307
+AYV E+NL+A S +P HP I LF D G +
Sbjct: 64 SYIAYVPEQNLVADVSGEP----VKHPDIGELF-DVDDGGSY 100
>gi|297180305|gb|ADI16523.1| uncharacterized conserved protein [uncultured bacterium
HF4000_009C18]
Length = 106
Score = 43.9 bits (102), Expect = 0.12, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 13/106 (12%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G V HK F +R VI +D S W + + + ++ QPFY +L A+ N
Sbjct: 8 FSIGDVVKHKQFNFRGVIYDVDFEFNNSEEWYK-SIPKDVRPRKDQPFYHLL----AENN 62
Query: 268 ILV--AYVAEENLLA--SDQPDMARFDHPYISFLFYGTDTAGDFIP 309
+ AYV+E+NL+ SD+P HP I +F +G F P
Sbjct: 63 EITYEAYVSEQNLVNDDSDEP----IKHPLIEEIFSAKKGSGYFRP 104
>gi|406862066|gb|EKD15118.1| F-box domain protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 557
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVL 259
+++GQ H+ + Y AVI G D C ++ W+ +++L +G +Q FY L
Sbjct: 506 YKIGQVFRHRRYAYTAVITGWDIECETNTDWLAHNNLDELSRGRNQSFYHAL 557
>gi|217073514|gb|ACJ85117.1| unknown [Medicago truncatula]
Length = 185
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 16/104 (15%)
Query: 137 RQLEAKRGLSSKS-----EAQDKALSIIRLRADLQKAIDSENYALAADLRDQICKLEAES 191
R+ ++G+ S+ ++D AL L +LQ AI ENYA AA++RD + L+ +
Sbjct: 2 RRFRTRQGVKSEDAESMLSSEDIALDENTLEEELQNAIAEENYAKAAEIRDTLKNLQKD- 60
Query: 192 LAASATALAFENARF--AFRLGQKVNHKIFGYRAVICGMDPVCC 233
S TA+ N++F +FR N + + + MD VCC
Sbjct: 61 ---SNTAVFGANSKFYDSFR-----NGDLAAMQGMWAKMDEVCC 96
>gi|89052923|ref|YP_508374.1| hemimethylated DNA-binding protein [Jannaschia sp. CCS1]
gi|88862472|gb|ABD53349.1| Hemimethylated DNA-binding protein [Jannaschia sp. CCS1]
Length = 108
Score = 43.5 bits (101), Expect = 0.14, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+ +GQ V H+ +R V+ +D S W E A E + QPFY +L + D
Sbjct: 8 YNIGQIVKHRKHPFRGVVFDIDAEFSNSDEWYE-AIPEDARPLKDQPFYHLLAE--NDQT 64
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLF 298
VAYV+E+NL+ D + HP + LF
Sbjct: 65 YYVAYVSEQNLVPDDTGEPV--THPDLPDLF 93
>gi|307132005|ref|YP_003884021.1| DNA-binding protein [Dickeya dadantii 3937]
gi|306529534|gb|ADM99464.1| DNA-binding protein, hemimethylated [Dickeya dadantii 3937]
Length = 102
Score = 43.5 bits (101), Expect = 0.15, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ++ HK+ GY V+ +DP E W E+A + L+ P ++ V+ D P
Sbjct: 6 FTIGQQIRHKLLGYPGVVIDIDPEYSLEQPKWEELAVNDTLRTAPW--YHVVMEDEQGRP 63
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFL 297
+ Y+AEE L+ D P+ + +HP + L
Sbjct: 64 --IHTYLAEEQLVNED-PNPS--EHPSLDEL 89
>gi|254451361|ref|ZP_05064798.1| hemimethylated DNA-binding protein [Octadecabacter arcticus 238]
gi|198265767|gb|EDY90037.1| hemimethylated DNA-binding protein [Octadecabacter arcticus 238]
Length = 96
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 214 VNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPNILVAYV 273
V H+ +R V+ +D + + W E E Q QPFY +L + D + VAYV
Sbjct: 2 VRHRKHPFRGVVFDVDAMFTNTEEWYEAIPEEARPQK-DQPFYHLLAE--NDQSYYVAYV 58
Query: 274 AEENLLA--SDQPDMARFDHPYISFLF 298
+E+NL+A S QP DHP + LF
Sbjct: 59 SEQNLVADYSGQP----VDHPDLDDLF 81
>gi|344323312|gb|AEN14437.1| conserved hypothetical protein [Lentinula edodes]
Length = 622
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 186 KLEAESLAASATALAFENARFAFRLGQKVNHKIFGYRAVICGMD-PVCCESSSWMEIAQV 244
LE E++ A L N + +G H+ Y A+I G D PV S SW+ ++
Sbjct: 444 SLEEEAITAQEVKLRTPNTTVRYFVGMLFEHRSLCYTALITGWDHPVM--SKSWIRETEI 501
Query: 245 EKLQQGPSQPFYQVLVDVHADPNILVAYVAEENL 278
L +G QP Y VL ++ YVAE+N+
Sbjct: 502 SDLPRGRDQPCYHVLRMDNSS-----QYVAEDNI 530
>gi|261822102|ref|YP_003260208.1| heat shock protein HspQ [Pectobacterium wasabiae WPP163]
gi|261606115|gb|ACX88601.1| hemimethylated DNA binding protein [Pectobacterium wasabiae WPP163]
gi|385872395|gb|AFI90915.1| Heat shock protein hspQ [Pectobacterium sp. SCC3193]
Length = 102
Score = 43.1 bits (100), Expect = 0.19, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLV-DVHAD 265
F +GQ++ HK+ G+ +I +DP E+ +W EI+ + + S+P+Y V++ D
Sbjct: 6 FGIGQQIRHKLLGFPGIIIDIDPEYSLETPTWEEISGNDTPR---SEPWYHVVMEDDEGQ 62
Query: 266 PNILVAYVAEENLLASDQPDMARFDHPYISFL 297
P + Y+AE L+ + +++ DHP ++ L
Sbjct: 63 P--IHTYLAEAQLM---KEELSEHDHPSLNEL 89
>gi|84517263|ref|ZP_01004618.1| hypothetical protein SKA53_00450 [Loktanella vestfoldensis SKA53]
gi|84508938|gb|EAQ05400.1| hypothetical protein SKA53_00450 [Loktanella vestfoldensis SKA53]
Length = 108
Score = 42.7 bits (99), Expect = 0.24, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+ LGQ V H+ +R VI +D + + W A E + QP+Y +L + + +
Sbjct: 8 YHLGQIVRHRKHPFRGVIFDVDAMFANTDEWYN-AIPEDSRPLKDQPYYHLLAE--NEQS 64
Query: 268 ILVAYVAEENLLA--SDQPDMARFDHPYISFLF 298
VAYV+E+NL+A S +P DHP + +F
Sbjct: 65 FYVAYVSEQNLVADHSGEP----VDHPDLDDMF 93
>gi|421080614|ref|ZP_15541532.1| Heat shock protein HspQ [Pectobacterium wasabiae CFBP 3304]
gi|401704626|gb|EJS94831.1| Heat shock protein HspQ [Pectobacterium wasabiae CFBP 3304]
Length = 102
Score = 42.0 bits (97), Expect = 0.40, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLV-DVHAD 265
F +GQ++ HK+ G+ +I +DP E+ +W EI+ + + ++P+Y V++ D
Sbjct: 6 FGIGQQIRHKLLGFPGIIIDIDPEYSLETPTWEEISGNDTPR---TEPWYHVVMEDDEGQ 62
Query: 266 PNILVAYVAEENLLASDQPDMARFDHPYISFL 297
P + Y+AE L+ + +++ DHP ++ L
Sbjct: 63 P--IHTYLAEAQLM---KEELSEHDHPSLNEL 89
>gi|407001028|gb|EKE18141.1| hypothetical protein ACD_10C00112G0003 [uncultured bacterium]
Length = 108
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 11/100 (11%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+ +GQ + H+ +R V+ +D + + W A E + +QPFY +L + D +
Sbjct: 8 YHIGQVLRHRKHPFRGVVFDVDAMFSNTEEWYH-AIPEDARPSRNQPFYHLLAE--NDQS 64
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDF 307
VAYV+E+NL+ + + HP + LF GDF
Sbjct: 65 YYVAYVSEQNLVPDETGEPV--SHPDLPDLF------GDF 96
>gi|449283575|gb|EMC90180.1| F-box only protein 21 [Columba livia]
Length = 218
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 44/108 (40%), Gaps = 6/108 (5%)
Query: 188 EAESLAASATALAFENARFA-FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEK 246
E S A +T + ++ F +GQ + HK FGY VI G D W++
Sbjct: 89 ETHSYFAESTHVHSPKPQYIQFSVGQVIVHKRFGYSGVIVGWDVKAKAPEEWLQHNYPPA 148
Query: 247 LQQGPSQPFYQVLVDVHADPNILVAYVAEENL-----LASDQPDMARF 289
Q P Y++L++ AY+ EE + L PDM +
Sbjct: 149 KQDLKDTPHYRILINKANGFGKSTAYIPEEEITIIMGLEVHHPDMKAY 196
>gi|324497849|gb|ADY39573.1| hypothetical protein [Hottentotta judaicus]
Length = 186
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 39/101 (38%), Gaps = 14/101 (13%)
Query: 187 LEAESLAASATALAFENARFA--------------FRLGQKVNHKIFGYRAVICGMDPVC 232
L+AES A ++ FA +R+GQ V HKI+ YR VI G D
Sbjct: 86 LQAESPAVEVMKYKQKHGYFASSPEPRNPRSPSVKYRIGQVVVHKIWHYRGVIIGWDEEA 145
Query: 233 CESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPNILVAYV 273
W +I + P Y +LVD + YV
Sbjct: 146 KAPEEWFKIMHGTGRPHWRTMPNYAILVDSRDRSKPQITYV 186
>gi|403416428|emb|CCM03128.1| predicted protein [Fibroporia radiculosa]
Length = 635
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 210 LGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPNIL 269
+G V H + Y + G P+C + +V++L++G QPFY V+ A
Sbjct: 491 VGMVVRHLWYDYVGCVIGWHPLCLAKEDLTPVIEVQRLRRGWDQPFYWVVTVDGAK---- 546
Query: 270 VAYVAEENL 278
YVAEE+L
Sbjct: 547 -RYVAEEDL 554
>gi|160872423|ref|ZP_02062555.1| hemimethylated DNA-binding region [Rickettsiella grylli]
gi|159121222|gb|EDP46560.1| hemimethylated DNA-binding region [Rickettsiella grylli]
Length = 105
Score = 41.2 bits (95), Expect = 0.70, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 12/99 (12%)
Query: 202 ENARFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLV- 260
E + F +G+ V H +FGYR V+ +D +W ++ +QP+Y +LV
Sbjct: 2 EPIKARFGIGEIVQHSLFGYRGVVVDVDAGFQGDDAWY--SKNAPGNPPKNQPWYHLLVH 59
Query: 261 -DVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLF 298
VH AY AE NL D D +HP + + F
Sbjct: 60 GSVHH------AYAAEINLTQDDTHDPV--EHPELDYFF 90
>gi|253688917|ref|YP_003018107.1| hemimethylated DNA binding protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|259491402|sp|C6DKX0.1|HSPQ_PECCP RecName: Full=Heat shock protein HspQ
gi|251755495|gb|ACT13571.1| hemimethylated DNA binding protein [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 102
Score = 41.2 bits (95), Expect = 0.70, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLV-DVHAD 265
F +GQ++ HK+ G+ V+ +DP E+ +W EI+ + + S+P+Y V++ D
Sbjct: 6 FGIGQQIRHKLLGFPGVVIDIDPEYSLETPTWEEISGNDTPR---SEPWYHVVMEDDEGQ 62
Query: 266 PNILVAYVAEENLLASDQPDMARFDHPYISFL 297
P + Y+AE L+ + +++ +HP ++ L
Sbjct: 63 P--IHTYLAEAQLM---KEELSEHEHPSLNEL 89
>gi|283781590|ref|YP_003372345.1| UvrB/UvrC protein [Pirellula staleyi DSM 6068]
gi|283440043|gb|ADB18485.1| UvrB/UvrC protein [Pirellula staleyi DSM 6068]
Length = 171
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 141 AKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAADLRDQICKLEAES 191
KR + S SE D +IRLR ++++A+D E+Y A+ LRD+I ++E E
Sbjct: 119 GKRPVGS-SEGTDAQTDLIRLRREMKEAVDREDYEQASKLRDEIRRVETEG 168
>gi|85712087|ref|ZP_01043140.1| hypothetical protein OS145_07092 [Idiomarina baltica OS145]
gi|85694077|gb|EAQ32022.1| hypothetical protein OS145_07092 [Idiomarina baltica OS145]
Length = 107
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 10/78 (12%)
Query: 205 RFAFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGP--SQPFYQVLVDV 262
R +F LGQ + H ++GY VI +D V S W + +++ G QP+Y +LV
Sbjct: 11 RASFNLGQPIKHCLYGYEGVIVDVDAVFSLSDEWYQ----QRVLSGADKQQPWYLILVKN 66
Query: 263 HADPNILVAYVAEENLLA 280
+ + YVAE L+A
Sbjct: 67 SS----IQTYVAESCLIA 80
>gi|397638869|gb|EJK73261.1| hypothetical protein THAOC_05129 [Thalassiosira oceanica]
Length = 749
Score = 40.8 bits (94), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 205 RFAFRLGQKVNHKIFGYRAVICGMDPVC-CESSSWMEIAQVEKLQQGPSQPFYQVLVDVH 263
+ + LGQ V HK++G+R VI G D + S+W + VE + +PFY + D++
Sbjct: 435 KIEYSLGQIVRHKLYGFRGVIVGFDEKPRIDVSNWDGLQGVEDASE---KPFYHIRPDIN 491
>gi|391343542|ref|XP_003746068.1| PREDICTED: uncharacterized protein LOC100905690 [Metaseiulus
occidentalis]
Length = 257
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 16/124 (12%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEI------AQVEKLQQGPSQPFYQVLVD 261
FR+G V H+I GYR VI G D W + + ++ ++P Y VLVD
Sbjct: 137 FRVGNMVQHQIQGYRGVIVGWDLTAKAPEHWFKALYDSDEVVADHIR---AEPHYAVLVD 193
Query: 262 VHADPNILVAYVAEENL------LASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLRE 315
+ P + YV + L L+ D + HP + ++ +++P LR
Sbjct: 194 IRDLPEPQMIYVPQYLLIRHHVRLSLDNAAFHQIVHP-ATISYFSEFNGRNYVPQPWLRA 252
Query: 316 KYNR 319
Y +
Sbjct: 253 LYPK 256
>gi|255587201|ref|XP_002534177.1| conserved hypothetical protein [Ricinus communis]
gi|223525737|gb|EEF28201.1| conserved hypothetical protein [Ricinus communis]
Length = 190
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 54/107 (50%), Gaps = 18/107 (16%)
Query: 136 SRQLEAKRGLSSKSEAQDKALS---II----RLRADLQKAIDSENYALAADLRDQICKLE 188
+ +L + R KSE ++ LS II L DLQ AI+ ENYA AA +RD + L+
Sbjct: 5 ASRLLSIRACQVKSEDSEEMLSGESIILDEQALTRDLQIAIEEENYAQAAKIRDSLRLLQ 64
Query: 189 AESLAASATALAFENARF--AFRLGQKVNHKIFGYRAVICGMDPVCC 233
+S A+ A NARF AFR N + +A+ D VCC
Sbjct: 65 EDSKASVLAA----NARFYNAFR-----NGDLASMQALWAKGDNVCC 102
>gi|399156841|ref|ZP_10756908.1| hypothetical protein SclubSA_07972 [SAR324 cluster bacterium SCGC
AAA001-C10]
Length = 102
Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +GQ ++H F YR VI +D S W ++ K + +P+Y VLV D +
Sbjct: 7 FSIGQIIHHLRFDYRGVIVDVDADFQGSEEWYR--EMAKSKPPRDKPWYHVLV----DQS 60
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLF 298
YVAE+NL ++P HP + F
Sbjct: 61 NTTTYVAEQNL--EEEPSPQPVLHPLLGQYF 89
>gi|343427190|emb|CBQ70718.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 987
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 17/86 (19%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKL--------------QQGPS 252
A R+G +H+ +GY I G D C S W+ V+ L ++G +
Sbjct: 801 AHRVGTVFSHRTYGYMGHIVGWDTQCAASEDWIVHMGVDNLPAPYDPAASQSTTRRRGRN 860
Query: 253 QPFYQVLVDVHADPNILVAYVAEENL 278
QPFYQ + D Y+AE N+
Sbjct: 861 QPFYQSITYDEQDTG---RYIAEVNV 883
>gi|47497763|dbj|BAD19863.1| unknown protein [Oryza sativa Japonica Group]
Length = 231
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 47/94 (50%), Gaps = 13/94 (13%)
Query: 127 KLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIR----LRADLQKAIDSENYALAADLRD 182
++T R + K G ++E SI R L+ DLQ AI ENYA AA LRD
Sbjct: 41 QMTSTRANKVRTVHVKSG---EAEGSPSTESITRDEETLQRDLQTAIQEENYAQAAKLRD 97
Query: 183 QICKLEAESLAASATALAFENARF--AFRLGQKV 214
++ L+ +S +A A NARF AF+ G V
Sbjct: 98 ELRVLQEDSRSAVLAA----NARFYNAFKNGDLV 127
>gi|115449137|ref|NP_001048348.1| Os02g0788500 [Oryza sativa Japonica Group]
gi|113537879|dbj|BAF10262.1| Os02g0788500 [Oryza sativa Japonica Group]
gi|215692516|dbj|BAG87936.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737625|dbj|BAG96755.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218191718|gb|EEC74145.1| hypothetical protein OsI_09224 [Oryza sativa Indica Group]
gi|222623813|gb|EEE57945.1| hypothetical protein OsJ_08664 [Oryza sativa Japonica Group]
Length = 240
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 47/94 (50%), Gaps = 13/94 (13%)
Query: 127 KLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIR----LRADLQKAIDSENYALAADLRD 182
++T R + K G ++E SI R L+ DLQ AI ENYA AA LRD
Sbjct: 50 QMTSTRANKVRTVHVKSG---EAEGSPSTESITRDEETLQRDLQTAIQEENYAQAAKLRD 106
Query: 183 QICKLEAESLAASATALAFENARF--AFRLGQKV 214
++ L+ +S +A A NARF AF+ G V
Sbjct: 107 ELRVLQEDSRSAVLAA----NARFYNAFKNGDLV 136
>gi|385787955|ref|YP_005819064.1| heat shock protein HspQ [Erwinia sp. Ejp617]
gi|310767227|gb|ADP12177.1| heat shock protein HspQ [Erwinia sp. Ejp617]
Length = 105
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F LGQ+V H++FG+ VI +DP + + +IA E L+ S P+Y V+++ D
Sbjct: 6 FGLGQQVRHQLFGFLGVIVDVDPEYSLDETEADDIAASEALR---SAPWYHVVME-DDDG 61
Query: 267 NILVAYVAEENL---LASDQPDMARFD 290
+ Y+AE L + + P+ D
Sbjct: 62 QTVQTYLAEAQLSWEVPGEHPEQPSMD 88
>gi|296121028|ref|YP_003628806.1| UvrB/UvrC protein [Planctomyces limnophilus DSM 3776]
gi|296013368|gb|ADG66607.1| UvrB/UvrC protein [Planctomyces limnophilus DSM 3776]
Length = 173
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 123 QLRNKLTEVEEEISRQLEAKRGLSSKS-EAQDKALSIIRLRADLQKAIDSENYALAADLR 181
R +LT + E I +++ + + +A + +IRL+ L++AID ENY AA LR
Sbjct: 97 HFREELTRLIENIHSEVQHVGKVPKRQPDASRQQFDLIRLKLQLKEAIDEENYEKAAGLR 156
Query: 182 DQICKLEAESLAAS 195
DQI ++E E ++S
Sbjct: 157 DQIRQVELELRSSS 170
>gi|308504994|ref|XP_003114680.1| CRE-TAG-229 protein [Caenorhabditis remanei]
gi|308258862|gb|EFP02815.1| CRE-TAG-229 protein [Caenorhabditis remanei]
Length = 200
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
FR+G V H +R VI G D ++++A + + +QP Y VL+D
Sbjct: 92 FRVGDVVFHPKLEFRGVIIGWDEQAIAPEKYIKVAHGDN-KHFSTQPNYAVLIDTRDRFT 150
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISFLFYGTD 302
++Y+ +ENL + HP + F G D
Sbjct: 151 PQMSYIVQENLRL----EKGTIWHPLVDKFFEGFD 181
>gi|403059084|ref|YP_006647301.1| hypothetical protein PCC21_026450 [Pectobacterium carotovorum
subsp. carotovorum PCC21]
gi|402806410|gb|AFR04048.1| hypothetical protein PCC21_026450 [Pectobacterium carotovorum
subsp. carotovorum PCC21]
Length = 102
Score = 39.3 bits (90), Expect = 2.4, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLV-DVHAD 265
F +GQ++ HK G+ V+ +DP ++ +W EI+ + + S+P+Y V++ D
Sbjct: 6 FGIGQQIRHKQLGFPGVVIDIDPEYSLDTPTWEEISGNDTPR---SEPWYHVVMEDDEGQ 62
Query: 266 PNILVAYVAEENLLASDQPDMARFDHPYISFL 297
P + Y+AE L+ + +++ DHP ++ L
Sbjct: 63 P--IHTYLAEAQLM---KEEISEHDHPSLNEL 89
>gi|297819718|ref|XP_002877742.1| hypothetical protein ARALYDRAFT_485388 [Arabidopsis lyrata subsp.
lyrata]
gi|297323580|gb|EFH54001.1| hypothetical protein ARALYDRAFT_485388 [Arabidopsis lyrata subsp.
lyrata]
Length = 2182
Score = 39.3 bits (90), Expect = 2.4, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 15/111 (13%)
Query: 113 LNMEEYDIAQQLRNKLTEVEEEIS-RQLEAKRGLSSKSE-AQDKALSIIRLR-------- 162
L MEE Q + KL E+EE+IS RQ EA +G SS S ++DK L I++ +
Sbjct: 552 LFMEEERRKQAAKQKLLELEEKISRRQAEAAKGCSSSSTISEDKFLDIVKEKESADVVDW 611
Query: 163 ADLQKAIDSENYALAADLRDQICKLEAESLAASATALAFENARFAFRLGQK 213
D ++ +D + DL I S +SAT+ + F F QK
Sbjct: 612 EDSERMVDRITTSSTLDLSVPI-----RSFESSATSQFSRDGSFGFPDRQK 657
>gi|159483425|ref|XP_001699761.1| predicted protein [Chlamydomonas reinhardtii]
gi|158281703|gb|EDP07457.1| predicted protein [Chlamydomonas reinhardtii]
Length = 951
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 14/104 (13%)
Query: 94 EDILFFFFQLDLATRVQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQD 153
+D LF FQ A + N+++ AQQ R E+E + LE G S+ EA+
Sbjct: 550 QDCLFIVFQEAKARLAELGTNLQD---AQQGRQ-----EKEAA--LEVLSGRVSQLEARA 599
Query: 154 KALSIIRLR-ADLQK---AIDSENYALAADLRDQICKLEAESLA 193
L +RLR A+L+ ++D+ YA+ A+LRD++ +LEAE+ A
Sbjct: 600 AELEAMRLRVAELEAQGASLDASRYAVTAELRDRVGELEAETEA 643
>gi|241608415|ref|XP_002405977.1| hypothetical protein IscW_ISCW019647 [Ixodes scapularis]
gi|215500733|gb|EEC10227.1| hypothetical protein IscW_ISCW019647 [Ixodes scapularis]
Length = 475
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 7/80 (8%)
Query: 219 FGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPNILVAYVAEENL 278
+ Y+ VI G D C + W+ V L QPFY VLV+ ++ Y A+ENL
Sbjct: 352 YHYQCVIYGWDGKCAANRDWIYQMGVHNLSHEDRQPFYNVLVEDGSN-----RYAAQENL 406
Query: 279 LASDQPDMARFDHPYISFLF 298
S P HP + F
Sbjct: 407 RPSMGPKA--IPHPDVGKYF 424
>gi|292487879|ref|YP_003530754.1| hypothetical protein EAMY_1396 [Erwinia amylovora CFBP1430]
gi|292899102|ref|YP_003538471.1| hypothetical protein EAM_1386 [Erwinia amylovora ATCC 49946]
gi|428784814|ref|ZP_19002305.1| hypothetical protein EaACW_1404 [Erwinia amylovora ACW56400]
gi|291198950|emb|CBJ46061.1| conserved hypothetical protein [Erwinia amylovora ATCC 49946]
gi|291553301|emb|CBA20346.1| Uncharacterized protein yccV [Erwinia amylovora CFBP1430]
gi|312172001|emb|CBX80258.1| Uncharacterized protein yccV [Erwinia amylovora ATCC BAA-2158]
gi|426276376|gb|EKV54103.1| hypothetical protein EaACW_1404 [Erwinia amylovora ACW56400]
Length = 105
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F LGQ+V H++ G+ VI +DP + +IA E L+ S P+Y V+++ + D
Sbjct: 6 FGLGQQVRHQLLGFLGVIVDVDPEYSLDEMDTDDIAASEALR---SAPWYHVVME-NDDG 61
Query: 267 NILVAYVAEENL---LASDQPDMARFD 290
+ Y+AE L + D P+ D
Sbjct: 62 QTIQTYLAEAQLSWEVPGDHPEQPSMD 88
>gi|356504325|ref|XP_003520947.1| PREDICTED: uncharacterized protein LOC100815544 [Glycine max]
Length = 252
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 11/81 (13%)
Query: 155 ALSIIRLRADLQKAIDSENYALAADLRDQICKLEAESLAASATALAFENARF--AFRLGQ 212
AL L +LQ AI ENYA AA++RD + L+ + S T + N+RF +FR G
Sbjct: 93 ALDEQTLEEELQHAIAEENYAKAAEIRDTLKNLQKD----SKTTVCGANSRFYESFRTGD 148
Query: 213 KVNHKIFGYRAVICGMDPVCC 233
+ +A+ D VCC
Sbjct: 149 -----LAAMQALWAKRDGVCC 164
>gi|32491252|ref|NP_871506.1| heat shock protein HspQ [Wigglesworthia glossinidia endosymbiont of
Glossina brevipalpis]
gi|25166459|dbj|BAC24649.1| yccV [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 109
Score = 38.9 bits (89), Expect = 3.5, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V HK+ GY VI +DP E S EI+ + L++ P +Y V+ D P
Sbjct: 10 FGIGQQVRHKLLGYLGVIIDVDPEYSLEKPSLEEISADDSLRRSPW--YYVVMEDEDGKP 67
Query: 267 NILVAYVAEENL---LASDQPDMARFD 290
+ Y+AE L ++ P+ + D
Sbjct: 68 --VHTYLAEAQLGYEISPVHPEQPKLD 92
>gi|440230360|ref|YP_007344153.1| hemimethylated DNA binding domain protein [Serratia marcescens
FGI94]
gi|440052065|gb|AGB81968.1| hemimethylated DNA binding domain protein [Serratia marcescens
FGI94]
Length = 105
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLV-DVHAD 265
F +GQ+V HK+ GY V+ +DP E EIA + L+ S P+Y V++ D
Sbjct: 6 FGIGQQVRHKLLGYLGVVIDIDPEYSLEQPQADEIAANDDLR---SAPWYHVVMEDEEGQ 62
Query: 266 PNILVAYVAEENLLASDQ 283
P + Y+AE L +Q
Sbjct: 63 P--VHTYLAEAQLAGEEQ 78
>gi|166223030|sp|Q8D251.2|HSPQ_WIGBR RecName: Full=Heat shock protein HspQ
Length = 105
Score = 38.9 bits (89), Expect = 3.5, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V HK+ GY VI +DP E S EI+ + L++ P +Y V+ D P
Sbjct: 6 FGIGQQVRHKLLGYLGVIIDVDPEYSLEKPSLEEISADDSLRRSPW--YYVVMEDEDGKP 63
Query: 267 NILVAYVAEENL---LASDQPDMARFD 290
+ Y+AE L ++ P+ + D
Sbjct: 64 --VHTYLAEAQLGYEISPVHPEQPKLD 88
>gi|334139319|ref|ZP_08512711.1| excinuclease ABC, B subunit [Paenibacillus sp. HGF7]
gi|333602132|gb|EGL13563.1| excinuclease ABC, B subunit [Paenibacillus sp. HGF7]
Length = 665
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 10/89 (11%)
Query: 109 VQCALNMEE----YDIAQQLRNKL--TEVEEEISRQL-EAKRGLSSKSEAQDKALSIIRL 161
+Q A N+E IA+++R+ + T+V EE + L E K G SK +D+A I RL
Sbjct: 579 IQEAYNIEHGITPQTIAKKIRDVIEATKVAEEKTEYLAEVKTGKMSK---KDRAAVIERL 635
Query: 162 RADLQKAIDSENYALAADLRDQICKLEAE 190
A+++ A S + AA+LRD + +L+AE
Sbjct: 636 EAEMKDAAKSLQFERAAELRDALLELKAE 664
>gi|32475126|ref|NP_868120.1| hypothetical protein RB7962 [Rhodopirellula baltica SH 1]
gi|421613772|ref|ZP_16054843.1| UvrB/UvrC protein [Rhodopirellula baltica SH28]
gi|440716892|ref|ZP_20897395.1| UvrB/UvrC protein [Rhodopirellula baltica SWK14]
gi|449138300|ref|ZP_21773570.1| UvrB/UvrC protein [Rhodopirellula europaea 6C]
gi|32445666|emb|CAD75672.1| conserved hypothetical protein [Rhodopirellula baltica SH 1]
gi|408495358|gb|EKJ99945.1| UvrB/UvrC protein [Rhodopirellula baltica SH28]
gi|436438085|gb|ELP31661.1| UvrB/UvrC protein [Rhodopirellula baltica SWK14]
gi|448883073|gb|EMB13617.1| UvrB/UvrC protein [Rhodopirellula europaea 6C]
Length = 173
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 100 FFQLDLATRVQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSII 159
FF+ + R+ C L+ + ++ L+ L + + + KR + + A +A +I
Sbjct: 80 FFEFRNSGRLGCPLDYDHFEA--DLKPLLINIHDSLEHT--GKRPTRAAATADSQA-DLI 134
Query: 160 RLRADLQKAIDSENYALAADLRDQICKLEAE 190
RLR +++ A++ E Y A++LRDQI ++ E
Sbjct: 135 RLRKEMEAAVEREEYERASELRDQINAIQGE 165
>gi|6523048|emb|CAB62316.1| putative protein [Arabidopsis thaliana]
Length = 2152
Score = 38.5 bits (88), Expect = 4.7, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 113 LNMEEYDIAQQLRNKLTEVEEEIS-RQLEAKRGLSSKSE-AQDKALSIIRLR--ADLQKA 168
L MEE Q + KL E+EE+IS RQ EA +G SS S ++DK L I++ + AD+
Sbjct: 555 LFMEEERRKQAAKQKLLELEEKISRRQAEAAKGCSSSSTISEDKFLDIVKEKDSADVVDW 614
Query: 169 IDSE 172
DSE
Sbjct: 615 EDSE 618
>gi|363581114|ref|ZP_09313924.1| two component regulator three Y domain-containing protein
[Flavobacteriaceae bacterium HQM9]
Length = 202
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 12/106 (11%)
Query: 112 ALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDS 171
L E+ D+ QL +K E++IS L + LS + ++ K S I++ DLQK I +
Sbjct: 39 TLETEKLDLVTQLISK----EKDIS--LRTREILSLQMQSVKKLQSKIKIAEDLQKVIKN 92
Query: 172 ----ENYALAADLRDQICKLEAESLAASATALAFENARFAFRLGQK 213
+ Y++ AD+R KLE E + +A NA F F+L K
Sbjct: 93 KTKVDTYSILADIRS--SKLEDEKVLVIKQQIAEHNASFIFQLTGK 136
>gi|240255576|ref|NP_190606.6| uncharacterized protein [Arabidopsis thaliana]
gi|332645138|gb|AEE78659.1| uncharacterized protein [Arabidopsis thaliana]
Length = 2156
Score = 38.1 bits (87), Expect = 5.1, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 113 LNMEEYDIAQQLRNKLTEVEEEIS-RQLEAKRGLSSKSE-AQDKALSIIRLR--ADLQKA 168
L MEE Q + KL E+EE+IS RQ EA +G SS S ++DK L I++ + AD+
Sbjct: 528 LFMEEERRKQAAKQKLLELEEKISRRQAEAAKGCSSSSTISEDKFLDIVKEKDSADVVDW 587
Query: 169 IDSE 172
DSE
Sbjct: 588 EDSE 591
>gi|388454979|ref|ZP_10137274.1| hypothetical protein FdumT_00310 [Fluoribacter dumoffii Tex-KL]
Length = 103
Score = 38.1 bits (87), Expect = 5.4, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F +G V HK YRA++ +DP+ S ++ Q +K + P+Y++LVD +
Sbjct: 7 FNIGDLVIHKNSRYRAIVVDVDPLFQASGNYN--PQAQKREFATRNPWYRLLVDDSSQ-- 62
Query: 268 ILVAYVAEENLLASDQPDMARFDHPYISF 296
+ YV EE +L +D M ++P++ F
Sbjct: 63 --ITYV-EECMLIADTSQMP-INNPHLPF 87
>gi|227329092|ref|ZP_03833116.1| hypothetical protein PcarcW_17860 [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 102
Score = 38.1 bits (87), Expect = 6.2, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLV-DVHAD 265
F +GQ++ H+ G+ V+ +DP E+ +W EI+ + + S+P+Y V++ D
Sbjct: 6 FGIGQQIRHRQLGFPGVVIDIDPEYSLETPTWEEISGNDTPR---SEPWYHVVMEDDEGQ 62
Query: 266 PNILVAYVAEENLLASDQPDMARFDHPYISFL 297
P + Y+AE L+ + +++ +HP ++ L
Sbjct: 63 P--IHTYLAEAQLM---KEELSEHEHPSLNEL 89
>gi|326428987|gb|EGD74557.1| ClpB [Salpingoeca sp. ATCC 50818]
Length = 799
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 18/185 (9%)
Query: 123 QLRNKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAADLR- 181
QL+ K EV+E +R E +R + ++E +++ + +LR DLQ A+ +Y LA+ L+
Sbjct: 382 QLKEKQKEVDELTARWQEERREIEQRNEDRER---LDKLRIDLQNAMRRGDYELASKLQY 438
Query: 182 DQICKLEAESLAASATALAFENARFAFRLGQKVNHK-IFGYRAVICGMDPVCCESSSWME 240
I +LE + A + A LG+ V + I + I G+ PV M
Sbjct: 439 GDIPELEKKVEAHEEEEAQLNHEHAARLLGEAVTSRDIAEVVSRITGI-PVRT-----MM 492
Query: 241 IAQVEKLQQGPSQPFYQVLVDVHADPNILVAYVAEENLLASDQPDMARFDHPYISFLFYG 300
++ EKL Q +V+ H A A N + + +A + P SF+F G
Sbjct: 493 QSEKEKLLQLEDHLRARVIGQDH-------ALTAVSNAVRLSRAGLASRNRPIASFMFLG 545
Query: 301 TDTAG 305
G
Sbjct: 546 PTGVG 550
>gi|402306007|ref|ZP_10825060.1| UvrB/UvrC domain protein [Prevotella sp. MSX73]
gi|400380096|gb|EJP32923.1| UvrB/UvrC domain protein [Prevotella sp. MSX73]
Length = 166
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 134 EISRQLEAKRGLSSK-SEAQDKALSIIRLRADLQKAIDSENYALAADLRDQI 184
E+ R L+ +++K + Q++ L + RL +DL +AI +EN+ L A +R+QI
Sbjct: 108 ELKRTLKQFSAIATKLQKRQNRVLLVARLESDLNEAIQAENFELCASIREQI 159
>gi|301096229|ref|XP_002897212.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262107297|gb|EEY65349.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1262
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 20/197 (10%)
Query: 23 ALWRRHFKLLEKSRIGIDRPCFCHQFVQGLHLRVTFNLLRQRNLRANAGWLFKGGSDRGL 82
LW L+ S + F H +GL + F + +A+ G
Sbjct: 839 GLWEMREITLDSSGV-----VFYHSLNEGLPVTRRFQWGQPEEWKASEG---------NE 884
Query: 83 DASSERSESANEDILFFFFQLDLATRVQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAK 142
D SE S ++ ++ F + T Q +N E Q+L L E +E+ +QL+AK
Sbjct: 885 DEESESSVTSRSELSAGSFTVSTITSKQ-QVNSE---AQQELMRSLLE-DEQFLQQLKAK 939
Query: 143 RGLSSKSEAQDKALSIIRLRADLQKAIDSENYALAADLRDQICKLEAESLAASATAL-AF 201
GL+S+S +A + R+ + + + EN A DL+D++ L E++ S +AL A
Sbjct: 940 LGLTSRSRPASRAAARSGRRSLVFEDREDENDARQVDLKDEMDALVDEAMDRSKSALVAA 999
Query: 202 ENARFAFRLGQKVNHKI 218
+ A+ +L Q ++
Sbjct: 1000 KVAKLQLKLPQTTGVRV 1016
>gi|224140331|ref|XP_002323536.1| predicted protein [Populus trichocarpa]
gi|222868166|gb|EEF05297.1| predicted protein [Populus trichocarpa]
Length = 153
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 11/72 (15%)
Query: 164 DLQKAIDSENYALAADLRDQICKLEAESLAASATALAFENARF--AFRLGQKVNHKIFGY 221
+LQ AI+ ENYA AA +RD + L+ +S A+ A NARF AFR G +
Sbjct: 3 ELQVAIEEENYAQAAKIRDGLKVLQEDSKASVLAA----NARFYNAFRKGD-----LAAM 53
Query: 222 RAVICGMDPVCC 233
+++ D VCC
Sbjct: 54 QSLWAKADNVCC 65
>gi|283768498|ref|ZP_06341410.1| excinuclease ABC, B subunit [Bulleidia extructa W1219]
gi|283104890|gb|EFC06262.1| excinuclease ABC, B subunit [Bulleidia extructa W1219]
Length = 660
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 109 VQCALNMEEYDIAQQLRNKLTEVEEEISRQLEAKRGLSSKSE--AQDKALSIIRLRADLQ 166
+Q N E + + + ++ + +V Q A R + K++ QD A I L A+++
Sbjct: 575 IQETYNKEHHIVPKTVQKSIGDVIRGKETQEMASRYIRKKAKMSKQDTATLITHLEAEMK 634
Query: 167 KAIDSENYALAADLRDQICKLEAES 191
+A + N+ AA+LRD + +L+AES
Sbjct: 635 EAAANLNFERAAELRDMVLELKAES 659
>gi|356496112|ref|XP_003516914.1| PREDICTED: uncharacterized protein LOC100811218 [Glycine max]
Length = 300
Score = 37.4 bits (85), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 18/117 (15%)
Query: 126 NKLTEVEEEISRQLEAKRGLSSKSEAQDKALSIIRLRAD-------LQKAIDSENYALAA 178
++L + IS+ + L KSE + LS + D LQ AI ENYA AA
Sbjct: 105 DQLCLLPGHISKLQMGRLRLGVKSEDSESILSSDNIALDEQTLEEELQNAIAEENYAKAA 164
Query: 179 DLRDQICKLEAESLAASATALAFENARF--AFRLGQKVNHKIFGYRAVICGMDPVCC 233
++RD + L+ + S T + N+RF +FR G + ++ D VCC
Sbjct: 165 EIRDTLKNLQKD----SKTTVFGANSRFYESFRTGDLAAMQTLWAKS-----DEVCC 212
>gi|357137361|ref|XP_003570269.1| PREDICTED: uncharacterized protein LOC100845596 [Brachypodium
distachyon]
Length = 249
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
Query: 146 SSKSEAQDKALSII---RLRADLQKAIDSENYALAADLRDQICKLEAESLAASATALAFE 202
SS +E A+ ++ LR DL+ AI+ E+Y AA LRD++ L + +A A
Sbjct: 73 SSDTENATTAIPVVDEETLRRDLEAAIEDEDYVSAARLRDELRHLREDGRSAVLAA---- 128
Query: 203 NARF--AFRLG 211
NARF AFR G
Sbjct: 129 NARFYDAFREG 139
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.135 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,926,729,138
Number of Sequences: 23463169
Number of extensions: 191458228
Number of successful extensions: 522579
Number of sequences better than 100.0: 592
Number of HSP's better than 100.0 without gapping: 218
Number of HSP's successfully gapped in prelim test: 374
Number of HSP's that attempted gapping in prelim test: 521996
Number of HSP's gapped (non-prelim): 710
length of query: 334
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 191
effective length of database: 9,003,962,200
effective search space: 1719756780200
effective search space used: 1719756780200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 77 (34.3 bits)