Query 019888
Match_columns 334
No_of_seqs 233 out of 548
Neff 6.5
Searched_HMMs 46136
Date Fri Mar 29 05:20:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019888.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019888hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF03071 GNT-I: GNT-I family; 100.0 3E-104 6E-109 780.0 26.1 329 1-331 100-432 (434)
2 cd02514 GT13_GLCNAC-TI GT13_GL 100.0 3.5E-97 8E-102 714.4 29.2 323 1-325 7-334 (334)
3 KOG1413 N-acetylglucosaminyltr 100.0 1.8E-94 3.8E-99 680.9 22.0 330 1-332 74-409 (411)
4 PF05060 MGAT2: N-acetylglucos 99.8 2.3E-18 5E-23 166.6 16.5 199 2-209 39-297 (356)
5 KOG2791 N-acetylglucosaminyltr 99.7 3.3E-16 7.2E-21 148.7 13.0 203 2-211 125-383 (455)
6 cd04185 GT_2_like_b Subfamily 98.9 2.4E-08 5.1E-13 88.4 14.1 135 1-169 4-138 (202)
7 cd04186 GT_2_like_c Subfamily 98.9 3.3E-08 7.2E-13 83.3 13.6 124 2-168 5-128 (166)
8 cd04196 GT_2_like_d Subfamily 98.8 1.1E-07 2.3E-12 84.1 13.7 174 2-196 6-198 (214)
9 cd02520 Glucosylceramide_synth 98.7 1.6E-07 3.6E-12 83.3 12.9 171 2-213 9-186 (196)
10 cd06433 GT_2_WfgS_like WfgS an 98.7 3.1E-07 6.8E-12 79.7 13.2 175 2-203 6-196 (202)
11 cd06420 GT2_Chondriotin_Pol_N 98.7 3.2E-07 7E-12 79.4 12.5 135 2-167 5-141 (182)
12 cd06423 CESA_like CESA_like is 98.6 3.2E-07 6.8E-12 76.6 11.1 112 2-134 5-118 (180)
13 PF00535 Glycos_transf_2: Glyc 98.6 1.1E-07 2.4E-12 79.5 7.9 96 2-118 6-105 (169)
14 cd06421 CESA_CelA_like CESA_Ce 98.6 3.8E-07 8.2E-12 82.0 11.3 111 2-130 9-120 (234)
15 cd02525 Succinoglycan_BP_ExoA 98.6 1.6E-06 3.4E-11 78.4 14.4 97 2-115 8-105 (249)
16 TIGR01556 rhamnosyltran L-rham 98.5 1.6E-06 3.4E-11 81.4 13.2 176 1-203 1-203 (281)
17 cd06434 GT2_HAS Hyaluronan syn 98.5 1E-06 2.2E-11 79.5 11.0 106 2-132 8-114 (235)
18 cd06427 CESA_like_2 CESA_like_ 98.5 1.8E-06 4E-11 79.0 12.6 112 2-131 9-122 (241)
19 cd02510 pp-GalNAc-T pp-GalNAc- 98.5 4.1E-06 8.8E-11 79.5 15.1 181 2-204 6-227 (299)
20 PRK11204 N-glycosyltransferase 98.5 7.1E-07 1.5E-11 88.7 10.1 109 2-131 62-171 (420)
21 cd06439 CESA_like_1 CESA_like_ 98.5 1.1E-06 2.5E-11 80.2 10.7 108 2-130 37-144 (251)
22 cd00761 Glyco_tranf_GTA_type G 98.5 2.2E-06 4.8E-11 69.7 10.8 128 2-173 5-133 (156)
23 cd04184 GT2_RfbC_Mx_like Myxoc 98.4 4.2E-06 9.1E-11 73.6 12.6 172 2-196 9-196 (202)
24 cd04192 GT_2_like_e Subfamily 98.4 2.1E-06 4.5E-11 76.6 10.6 98 2-115 5-106 (229)
25 PRK10018 putative glycosyl tra 98.4 1.1E-05 2.4E-10 76.8 16.0 183 2-207 13-212 (279)
26 cd04195 GT2_AmsE_like GT2_AmsE 98.4 2.2E-06 4.8E-11 75.4 10.3 109 2-131 6-117 (201)
27 TIGR03111 glyc2_xrt_Gpos1 puta 98.4 1.7E-06 3.7E-11 87.2 10.1 112 2-132 57-169 (439)
28 cd02526 GT2_RfbF_like RfbF is 98.4 6.6E-06 1.4E-10 74.3 12.7 178 1-199 4-202 (237)
29 cd06442 DPM1_like DPM1_like re 98.3 3.2E-06 7E-11 75.5 10.0 111 2-131 5-116 (224)
30 cd06913 beta3GnTL1_like Beta 1 98.3 1.1E-05 2.5E-10 72.4 13.5 183 2-202 5-210 (219)
31 cd04179 DPM_DPG-synthase_like 98.3 5.4E-06 1.2E-10 71.7 9.9 116 1-134 4-120 (185)
32 cd02522 GT_2_like_a GT_2_like_ 98.2 3.4E-05 7.4E-10 68.7 13.8 165 2-196 7-181 (221)
33 cd06436 GlcNAc-1-P_transferase 98.2 1.3E-05 2.9E-10 71.0 10.8 110 2-130 5-124 (191)
34 PF13641 Glyco_tranf_2_3: Glyc 98.2 1.5E-06 3.3E-11 78.1 4.7 174 2-196 9-205 (228)
35 cd06437 CESA_CaSu_A2 Cellulose 98.2 1.5E-05 3.2E-10 72.3 11.1 110 2-131 9-123 (232)
36 cd06438 EpsO_like EpsO protein 98.2 1.2E-05 2.5E-10 70.5 10.0 101 2-116 5-106 (183)
37 PRK14583 hmsR N-glycosyltransf 98.2 8.1E-06 1.8E-10 82.3 9.8 109 2-131 83-192 (444)
38 PRK11498 bcsA cellulose syntha 98.2 1.3E-05 2.9E-10 86.7 11.7 167 2-193 268-460 (852)
39 cd06435 CESA_NdvC_like NdvC_li 98.2 2.2E-05 4.8E-10 71.0 11.3 108 2-130 6-119 (236)
40 TIGR03472 HpnI hopanoid biosyn 98.1 1.7E-05 3.7E-10 78.1 10.6 111 2-131 49-162 (373)
41 PRK10073 putative glycosyl tra 98.1 2.1E-05 4.5E-10 76.5 10.5 104 2-126 14-118 (328)
42 cd04187 DPM1_like_bac Bacteria 98.1 2E-05 4.3E-10 68.5 9.4 107 2-126 5-112 (181)
43 TIGR03469 HonB hopene-associat 98.0 3.4E-05 7.5E-10 76.3 9.9 102 2-116 48-158 (384)
44 PRK10063 putative glycosyl tra 98.0 5.8E-05 1.3E-09 70.4 10.5 180 1-201 8-196 (248)
45 TIGR03030 CelA cellulose synth 97.9 9.5E-05 2E-09 79.1 11.8 167 2-193 139-349 (713)
46 cd04190 Chitin_synth_C C-termi 97.8 9.2E-05 2E-09 68.4 9.6 99 2-132 5-111 (244)
47 cd02511 Beta4Glucosyltransfera 97.8 0.00012 2.6E-09 66.9 9.1 90 1-116 7-96 (229)
48 cd04188 DPG_synthase DPG_synth 97.8 0.0002 4.3E-09 63.9 10.1 99 2-115 5-106 (211)
49 COG1216 Predicted glycosyltran 97.7 0.00024 5.3E-09 67.9 9.7 112 1-133 10-123 (305)
50 PLN02726 dolichyl-phosphate be 97.6 0.00027 5.9E-09 64.9 9.1 98 2-115 17-117 (243)
51 PRK13915 putative glucosyl-3-p 97.5 0.00048 1E-08 66.5 9.7 110 2-131 39-153 (306)
52 cd04191 Glucan_BSP_ModH Glucan 97.5 0.001 2.2E-08 62.6 11.1 110 2-130 7-131 (254)
53 PRK05454 glucosyltransferase M 97.4 0.0015 3.2E-08 69.8 11.4 110 2-130 132-256 (691)
54 COG0463 WcaA Glycosyltransfera 97.2 0.0012 2.5E-08 54.7 7.4 91 2-111 11-102 (291)
55 COG1215 Glycosyltransferases, 97.1 0.0042 9.2E-08 61.4 10.7 108 2-129 62-172 (439)
56 PRK10714 undecaprenyl phosphat 97.0 0.0021 4.6E-08 62.4 8.2 100 2-116 14-115 (325)
57 PF10111 Glyco_tranf_2_2: Glyc 97.0 0.013 2.9E-07 55.4 13.3 106 7-129 17-127 (281)
58 PTZ00260 dolichyl-phosphate be 96.8 0.0051 1.1E-07 60.0 8.8 114 2-131 78-201 (333)
59 PRK14716 bacteriophage N4 adso 96.6 0.0097 2.1E-07 61.4 9.4 99 2-115 74-182 (504)
60 PF01755 Glyco_transf_25: Glyc 95.9 0.045 9.7E-07 48.7 8.7 99 5-120 12-114 (200)
61 PRK11234 nfrB bacteriophage N4 95.3 0.063 1.4E-06 57.9 8.7 99 2-115 71-179 (727)
62 PRK15489 nfrB bacteriophage N4 94.8 0.11 2.5E-06 55.6 8.6 107 2-127 79-195 (703)
63 KOG2978 Dolichol-phosphate man 94.2 0.14 3.1E-06 46.3 6.6 99 3-117 12-114 (238)
64 PF04666 Glyco_transf_54: N-Ac 90.2 3.5 7.6E-05 39.9 11.0 30 92-121 170-199 (297)
65 cd06532 Glyco_transf_25 Glycos 89.7 0.54 1.2E-05 39.2 4.5 88 4-107 9-98 (128)
66 PF03214 RGP: Reversibly glyco 87.1 0.26 5.6E-06 48.1 0.9 87 16-112 25-112 (348)
67 PF13506 Glyco_transf_21: Glyc 86.5 1.6 3.5E-05 38.5 5.7 47 82-132 21-68 (175)
68 cd04194 GT8_A4GalT_like A4GalT 82.9 6.1 0.00013 36.3 8.1 102 7-114 13-118 (248)
69 PF13712 Glyco_tranf_2_5: Glyc 82.8 8.5 0.00019 35.2 8.9 45 82-129 45-90 (217)
70 cd00505 Glyco_transf_8 Members 82.3 6.4 0.00014 36.3 8.0 106 4-114 11-118 (246)
71 PF01501 Glyco_transf_8: Glyco 77.6 3.1 6.8E-05 37.3 4.2 119 5-130 10-133 (250)
72 COG2943 MdoH Membrane glycosyl 76.9 14 0.00031 38.6 8.9 105 9-130 164-276 (736)
73 COG3306 Glycosyltransferase in 72.5 5.3 0.00012 37.8 4.4 29 91-119 86-114 (255)
74 PF01762 Galactosyl_T: Galacto 70.7 27 0.00059 30.9 8.4 86 82-167 70-163 (195)
75 PF11316 Rhamno_transf: Putati 70.7 32 0.00068 32.1 9.1 87 11-119 46-142 (234)
76 cd00218 GlcAT-I Beta1,3-glucur 65.4 88 0.0019 29.1 10.7 102 2-115 9-119 (223)
77 PF13704 Glyco_tranf_2_4: Glyc 63.3 66 0.0014 24.6 9.3 86 4-107 2-87 (97)
78 PF12804 NTP_transf_3: MobA-li 62.6 91 0.002 26.0 10.0 94 9-129 27-122 (160)
79 PF13632 Glyco_trans_2_3: Glyc 61.0 10 0.00023 32.8 3.7 98 94-196 1-119 (193)
80 TIGR02251 HIF-SF_euk Dullard-l 58.2 13 0.00029 32.2 3.8 39 2-48 41-79 (162)
81 PF09258 Glyco_transf_64: Glyc 57.9 39 0.00085 31.6 7.2 97 3-126 9-108 (247)
82 PRK15171 lipopolysaccharide 1, 57.7 76 0.0017 31.0 9.4 114 6-129 37-154 (334)
83 PLN02718 Probable galacturonos 52.7 57 0.0012 34.6 8.0 100 11-113 328-439 (603)
84 COG1213 Predicted sugar nucleo 51.3 1.4E+02 0.0031 28.0 9.5 100 9-135 34-135 (239)
85 COG4092 Predicted glycosyltran 50.6 69 0.0015 30.9 7.4 106 4-120 15-123 (346)
86 KOG4179 Lysyl hydrolase/glycos 47.9 1.1E+02 0.0023 31.3 8.6 106 4-121 301-408 (568)
87 cd02537 GT8_Glycogenin Glycoge 46.3 1.6E+02 0.0035 27.0 9.3 95 7-112 14-110 (240)
88 cd06431 GT8_LARGE_C LARGE cata 44.0 2E+02 0.0042 27.4 9.7 116 6-129 13-133 (280)
89 cd02523 PC_cytidylyltransferas 40.6 2.3E+02 0.0051 25.1 9.3 84 9-114 32-115 (229)
90 cd06429 GT8_like_1 GT8_like_1 39.7 1E+02 0.0022 29.0 6.9 41 72-114 96-136 (257)
91 PLN02458 transferase, transfer 39.2 3.7E+02 0.0081 26.6 10.7 101 2-114 120-225 (346)
92 PLN02867 Probable galacturonos 37.6 41 0.00089 35.2 4.1 53 71-129 326-378 (535)
93 PF00483 NTP_transferase: Nucl 36.7 2E+02 0.0043 25.7 8.2 92 8-118 33-129 (248)
94 PLN02190 cellulose synthase-li 35.5 43 0.00093 36.5 4.0 32 6-38 109-140 (756)
95 PLN03180 reversibly glycosylat 34.6 20 0.00043 35.3 1.2 24 92-115 94-124 (346)
96 PLN00176 galactinol synthase 34.0 1.9E+02 0.0041 28.5 7.9 93 10-112 40-133 (333)
97 PF07573 AreA_N: Nitrogen regu 33.8 21 0.00045 27.8 1.0 16 290-305 69-84 (88)
98 PLN02523 galacturonosyltransfe 31.8 54 0.0012 34.5 3.9 40 71-112 358-397 (559)
99 KOG2977 Glycosyltransferase [G 31.3 1.5E+02 0.0032 28.9 6.4 82 7-103 84-169 (323)
100 PLN02659 Probable galacturonos 31.2 46 0.001 34.8 3.3 41 71-113 325-365 (534)
101 KOG2792 Putative cytochrome C 30.1 1.5E+02 0.0032 28.4 6.1 41 6-48 156-202 (280)
102 cd06422 NTP_transferase_like_1 29.5 3.9E+02 0.0085 23.5 10.6 89 8-115 32-120 (221)
103 COG1442 RfaJ Lipopolysaccharid 28.1 4.1E+02 0.009 26.0 9.2 101 8-114 16-120 (325)
104 cd04181 NTP_transferase NTP_tr 27.8 3.6E+02 0.0078 23.3 8.2 90 4-114 28-118 (217)
105 PLN02829 Probable galacturonos 26.5 73 0.0016 34.0 3.8 40 71-112 438-477 (639)
106 PLN02769 Probable galacturonos 26.1 69 0.0015 34.2 3.5 41 71-113 433-473 (629)
107 cd06432 GT8_HUGT1_C_like The C 26.0 4E+02 0.0086 24.8 8.4 97 7-112 14-116 (248)
108 PF03142 Chitin_synth_2: Chiti 25.9 1E+02 0.0022 32.3 4.8 38 92-132 202-239 (527)
109 PLN02870 Probable galacturonos 25.3 70 0.0015 33.5 3.4 40 71-112 324-363 (533)
110 PF06306 CgtA: Beta-1,4-N-acet 25.0 1.7E+02 0.0036 28.9 5.7 114 4-133 97-214 (347)
111 PLN02893 Cellulose synthase-li 24.3 77 0.0017 34.6 3.6 32 6-38 117-148 (734)
112 PF13419 HAD_2: Haloacid dehal 22.2 3.3E+02 0.0071 22.1 6.5 34 9-48 82-115 (176)
113 TIGR02250 FCP1_euk FCP1-like p 21.9 2.7E+02 0.0059 24.0 6.0 78 3-103 58-138 (156)
114 PF11735 CAP59_mtransfer: Cryp 21.4 6.8E+02 0.015 23.4 10.1 106 7-114 17-135 (241)
115 TIGR01454 AHBA_synth_RP 3-amin 21.2 5.1E+02 0.011 22.4 7.9 35 9-49 80-114 (205)
116 PLN02910 polygalacturonate 4-a 20.9 1.2E+02 0.0025 32.6 4.0 40 71-112 456-495 (657)
117 KOG2288 Galactosyltransferases 20.7 3.6E+02 0.0079 25.8 6.8 54 70-126 87-140 (274)
118 PLN02195 cellulose synthase A 20.2 1.1E+02 0.0023 34.6 3.7 46 6-52 268-320 (977)
119 PLN02742 Probable galacturonos 20.2 1E+02 0.0023 32.3 3.5 40 71-112 334-373 (534)
No 1
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=100.00 E-value=2.6e-104 Score=779.96 Aligned_cols=329 Identities=55% Similarity=1.034 Sum_probs=256.5
Q ss_pred CcccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCC-CcceEEeccCCCCCCC-CCCchhHHHHHHHH
Q 019888 1 MACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYD-KLTYMQHLDFEPVHAD-NPGELTAYYKIARH 78 (334)
Q Consensus 1 ia~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~-~~~~i~~~~~~~~~~~-~~~~~~~y~~ia~H 78 (334)
||||||+||+|||++|++++| .++.+||+|||||.+++|+++|++|+ .+.+|+|++..++... ...++.+|++||+|
T Consensus 100 ~AcNRp~yl~r~L~sLl~~rp-~~~~fpIiVSQDg~~~~~~~vi~~y~~~v~~i~~~~~~~i~~~~~~~~~~~y~~IA~H 178 (434)
T PF03071_consen 100 FACNRPDYLRRTLDSLLKYRP-SAEKFPIIVSQDGDDEEVAEVIKSYGDQVTYIQHPDFSPITIPPKEKKFKGYYKIARH 178 (434)
T ss_dssp EESS-TT-HHHHHHHHHHH-S--TTTS-EEEEE-TT-HHHHHHHHGGGGGSEEEE-S--S-----TT-GGGHHHHHHHHH
T ss_pred EecCCcHHHHHHHHHHHHcCC-CCCCccEEEEecCCcHHHHHHHHHhhhhheeeecCCcCCceeCcccccccchHHHHHH
Confidence 699999999999999999997 58999999999999999999999995 5889998876554322 11357899999999
Q ss_pred HHHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCCCCCCCccccCC--CceeeecCCCCccc
Q 019888 79 YKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSWNDNGQKQFVHD--PYVLYRSDFFPGLG 156 (334)
Q Consensus 79 yk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~ndng~~~~~~~--~~~lyrs~~fp~~G 156 (334)
|||||++||+.++|++||||||||++|||||+||++++++|++|++|||||||||||+.+.+++ |..+||++||||||
T Consensus 179 Yk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~~~~~ll~~D~sl~ciSawNdnG~~~~~~~~~~~~lyRsdffpglG 258 (434)
T PF03071_consen 179 YKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFSATLPLLENDPSLWCISAWNDNGKEHFVDDSRPSLLYRSDFFPGLG 258 (434)
T ss_dssp HHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHHHHHHHHHH-TTEEEEES--TT-BGGGS-TT-TT-EEEESS---SS
T ss_pred HHHHHHHHHHhcCCceEEEEecCcccCccHHHHHHHHHHHHhcCCCeEEEEccccCCccccccCCCccceEecccCCchH
Confidence 9999999999889999999999999999999999999999999999999999999999998877 99999999999999
Q ss_pred ccccchhhhhhCCCCCchhHHHHHhhhhhhcCCeeEeecccccccccCcCCCcchhhhhhhccCCCCCCcccccccCccc
Q 019888 157 WMLTRTTWDELSPKWPKAYWDDWLRLKENHKGRQFIRPEVCRTYNFGEHGSSLGQFFQQYLAPIKLNDVPVDWKSRDLSY 236 (334)
Q Consensus 157 W~~~r~~W~el~~~wp~~~Wd~wlr~~~~rk~r~cI~P~isrt~n~G~~G~~~~~~~~~~l~~~~ln~~~v~~~~~d~~~ 236 (334)
|||||++|+|++|+||+++||||||+|++|+||+||+||||||+|||..|+|+|+||++||++|++|+++|+|+++|++|
T Consensus 259 Wml~r~~w~el~~~Wp~~~WDdwmR~~~~rkgR~cIrPeisRt~~fg~~G~s~g~~f~~~l~~i~ln~~~v~~~~~dl~y 338 (434)
T PF03071_consen 259 WMLTRELWDELEPKWPKAFWDDWMRQPEQRKGRQCIRPEISRTYHFGKKGVSNGQFFDKYLKKIKLNTEFVDFTKMDLSY 338 (434)
T ss_dssp EEEEHHHHHHHGGG--SS-HHHHHTSHHHHTT-EEEEESSBSEEE--SSSSS-THHHHHTGGGB-B--S---GGGS--GG
T ss_pred HHhhHHHHHhhcccCCCCCchhhhcCccccCCCceeeccCCCccccCcCCcchHHHHHHHHhhccccCCcccceeCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHhcCccccchhhhccCCCCceEEEEecChhHHHHHHHHhCccccCCCCCCCcCceeEEEEEEcCCc
Q 019888 237 LIKDNYEKYFAEIVKKATPVHGENVVLKAHDIEGDVRIEYKDQSHFEIIARQFGIFNEWKDGIPRTAYKGVVVFRYQTPR 316 (334)
Q Consensus 237 l~~~~Yd~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~i~y~~~~~~~~~a~~~~~~~~~~~g~~R~~y~gvv~~~~~~~~ 316 (334)
|.+++||+.|.+.|++|++|++.+..+....+.++|||+|+++++|+++|++||||+|||+|||||+|+|||+|+|+ |+
T Consensus 339 l~~~~Yd~~~~~~v~~a~~v~~~~~~~~~~~~~~~vri~Y~~~~~~~~~a~~l~im~d~k~GvpRtaY~GVV~~~~~-g~ 417 (434)
T PF03071_consen 339 LLKDNYDKEFKKEVYSAPPVDSSDLITFAFSTSGDVRIQYSSQPDFKRIAKKLGIMDDWKSGVPRTAYKGVVTFFYK-GR 417 (434)
T ss_dssp GSHHHHHHHHHHHHHHS-B--HHHHHTT--TT-SEEEEE--SHHHHHHHHHHTT----EETTEETT-BTTBEEEEET-TE
T ss_pred hhhhhhHHHHHHHHhcCcccchhhhccccccCCCCEEEEECChHHHHHHHHhCCchhhccCCCcccccceEEEEEEC-CE
Confidence 99999999999999999999999988777667789999999999999999999999999999999999999999999 99
Q ss_pred EEEEEcCCCccccCc
Q 019888 317 RIFLVGPDSLRQLGI 331 (334)
Q Consensus 317 ~v~l~~~~~~~~~~~ 331 (334)
||||||+.+|+.++.
T Consensus 418 rv~lvp~~~~~~y~~ 432 (434)
T PF03071_consen 418 RVFLVPPYSWSGYDP 432 (434)
T ss_dssp EEEEE--TT--S--T
T ss_pred EEEEECCcchhhcCC
Confidence 999999999766653
No 2
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=100.00 E-value=3.5e-97 Score=714.39 Aligned_cols=323 Identities=51% Similarity=0.955 Sum_probs=303.9
Q ss_pred CcccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCC-CcceEEeccCCCCCCCCCCchhHHHHHHHHH
Q 019888 1 MACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYD-KLTYMQHLDFEPVHADNPGELTAYYKIARHY 79 (334)
Q Consensus 1 ia~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~-~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hy 79 (334)
||||||++|+|||+||++++| .+++++|||+|||+++++.++++++. .+++++|+..+..+.+....+.+|++||+||
T Consensus 7 ~ayNRp~~l~r~LesLl~~~p-~~~~~~liIs~DG~~~~~~~~v~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~ia~hy 85 (334)
T cd02514 7 IACNRPDYLRRMLDSLLSYRP-SAEKFPIIVSQDGGYEEVADVAKSFGDGVTHIQHPPISIKNVNPPHKFQGYYRIARHY 85 (334)
T ss_pred EecCCHHHHHHHHHHHHhccc-cCCCceEEEEeCCCchHHHHHHHhhccccEEEEcccccccccCcccccchhhHHHHHH
Confidence 689999999999999999986 58999999999999999999999984 3778888765544445555788999999999
Q ss_pred HHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCCCCCCCccccCC-CceeeecCCCCccccc
Q 019888 80 KWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSWNDNGQKQFVHD-PYVLYRSDFFPGLGWM 158 (334)
Q Consensus 80 k~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~ndng~~~~~~~-~~~lyrs~~fp~~GW~ 158 (334)
+|||+++|+.+++++||||||||++|||||+||++++++|++|++|+||||||+||+.+.+++ +..+||++||||||||
T Consensus 86 k~aln~vF~~~~~~~vIILEDDl~~sPdFf~yf~~~l~~y~~D~~v~~ISa~NdnG~~~~~~~~~~~lyrs~ff~glGWm 165 (334)
T cd02514 86 KWALTQTFNLFGYSFVIILEDDLDIAPDFFSYFQATLPLLEEDPSLWCISAWNDNGKEHFVDDTPSLLYRTDFFPGLGWM 165 (334)
T ss_pred HHHHHHHHHhcCCCEEEEECCCCccCHhHHHHHHHHHHHHhcCCCEEEEEeeccCCcccccCCCcceEEEecCCCchHHH
Confidence 999999999888999999999999999999999999999999999999999999999887766 8999999999999999
Q ss_pred ccchhhhhhCCCCCchhHHHHHhhhhhhcCCeeEeecccccccccCcCCCcchhhhhhhccCCCCCCcccccccCccccc
Q 019888 159 LTRTTWDELSPKWPKAYWDDWLRLKENHKGRQFIRPEVCRTYNFGEHGSSLGQFFQQYLAPIKLNDVPVDWKSRDLSYLI 238 (334)
Q Consensus 159 ~~r~~W~el~~~wp~~~Wd~wlr~~~~rk~r~cI~P~isrt~n~G~~G~~~~~~~~~~l~~~~ln~~~v~~~~~d~~~l~ 238 (334)
+||++|++++++||..+||+|||.|++||||+||+||||||+|||.+|+|.|+||++||++|+||+.+|+|.++|++||.
T Consensus 166 l~r~~W~e~~~~wp~~~WD~w~R~~~~rkgr~cirPeisRt~~~g~~g~s~g~f~~~~l~~i~ln~~~v~~~~~dl~~l~ 245 (334)
T cd02514 166 LTRKLWKELEPKWPKAFWDDWMRLPEQRKGRECIRPEISRTYHFGKKGVSNGQFFDKYLKKIKLNTVFVVFTKLDLSYLK 245 (334)
T ss_pred HHHHHHHHhCCCCCCCChHHhhcchhhhcCCccccCCcchheeccccccccchHHHHHhhcccccccccccccCCHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhcCccccchhh---hccCCCCceEEEEecChhHHHHHHHHhCccccCCCCCCCcCceeEEEEEEcCC
Q 019888 239 KDNYEKYFAEIVKKATPVHGENVV---LKAHDIEGDVRIEYKDQSHFEIIARQFGIFNEWKDGIPRTAYKGVVVFRYQTP 315 (334)
Q Consensus 239 ~~~Yd~~~~~~~~~a~~~~~~~~~---~~~~~~~~~~~i~y~~~~~~~~~a~~~~~~~~~~~g~~R~~y~gvv~~~~~~~ 315 (334)
+++||+.+.++|++|+++++.+.+ ...+++++++||+|+++.+|+++|++||+|+|||+|||||+|+|||+|+|+ |
T Consensus 246 ~~~y~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~i~y~~~~~~~~~a~~~~~~~~~k~g~~R~~y~gvv~~~~~-~ 324 (334)
T cd02514 246 KDNYDKEFHRLVYGAVVLDHEKNPCELSFVPDTEGKVRVVYTGRDDFKTWAKAFGVMDDLKDGVPRTAYKGIVRFFFK-G 324 (334)
T ss_pred HHHHHHHHHHHHhcCcccchhcccchhhcCcCCCCCEEEEECCHHHHHHHHHHhCcccccccCCcccceeEEEEEEEC-C
Confidence 999999999999999999999875 345678899999999999999999999999999999999999999999999 9
Q ss_pred cEEEEEcCCC
Q 019888 316 RRIFLVGPDS 325 (334)
Q Consensus 316 ~~v~l~~~~~ 325 (334)
+||||||+.+
T Consensus 325 ~~v~lv~~~~ 334 (334)
T cd02514 325 NRVFLVPPPT 334 (334)
T ss_pred EEEEEeCCCC
Confidence 9999999864
No 3
>KOG1413 consensus N-acetylglucosaminyltransferase I [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.8e-94 Score=680.88 Aligned_cols=330 Identities=50% Similarity=0.912 Sum_probs=310.6
Q ss_pred CcccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCC-cceEEeccC--CCCC-CCCCCchhHHHHHH
Q 019888 1 MACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDK-LTYMQHLDF--EPVH-ADNPGELTAYYKIA 76 (334)
Q Consensus 1 ia~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~-~~~i~~~~~--~~~~-~~~~~~~~~y~~ia 76 (334)
|+||||++|++|++.|+.++| +++++||||||||.+++|.+.+++|+. +.+++|+.. ..+. +...+.+.+||+||
T Consensus 74 f~csR~~~lr~~v~kll~yrP-saekfpiiVSQD~~~e~vk~~~~~~g~~v~~i~~~~h~~~ei~v~~~~~k~~~Yy~Ia 152 (411)
T KOG1413|consen 74 FACSRADALRRHVKKLLEYRP-SAEKFPIIVSQDCEKEAVKKKLLSYGSDVSHIQHPMHLKDEISVPPRHKKFNAYYKIA 152 (411)
T ss_pred EecCcHHHHHHHHHHHHHhCc-chhhcCEEEeccCCcHHHHHHHHHhccchhhhcCccccccccccCCcccccchhHHHH
Confidence 689999999999999999997 599999999999999999999999985 788888742 2211 23346788999999
Q ss_pred HHHHHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCCCCCCCccccCC--CceeeecCCCCc
Q 019888 77 RHYKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSWNDNGQKQFVHD--PYVLYRSDFFPG 154 (334)
Q Consensus 77 ~Hyk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~ndng~~~~~~~--~~~lyrs~~fp~ 154 (334)
|||+|||+++|..+++++||++|||+.++||||+||..+..+++.|++|||+|||||||++..++. |+.+||+|||||
T Consensus 153 rHYkwAL~q~F~~~~~s~vii~eDDl~iapDFF~YF~~t~~llk~D~siwcvsaWNDNGk~~~Id~~~~~~lYRtDFFpG 232 (411)
T KOG1413|consen 153 RHYKWALNQLFIVFRESRVIITEDDLNIAPDFFSYFRNTIILLKGDPSIWCVSAWNDNGKKQTIDSTRPSLLYRTDFFPG 232 (411)
T ss_pred HHHHHHHhhHHhhcCCceeEEecchhhhhhHHHHHHHHHHHHHhcCCceEEeeeeccCCCcccccccccchhhhcccccc
Confidence 999999999998889999999999999999999999999999999999999999999999998877 899999999999
Q ss_pred ccccccchhhhhhCCCCCchhHHHHHhhhhhhcCCeeEeecccccccccCcCCCcchhhhhhhccCCCCCCcccccccCc
Q 019888 155 LGWMLTRTTWDELSPKWPKAYWDDWLRLKENHKGRQFIRPEVCRTYNFGEHGSSLGQFFQQYLAPIKLNDVPVDWKSRDL 234 (334)
Q Consensus 155 ~GW~~~r~~W~el~~~wp~~~Wd~wlr~~~~rk~r~cI~P~isrt~n~G~~G~~~~~~~~~~l~~~~ln~~~v~~~~~d~ 234 (334)
||||+++++|+|++|+||.+|||||||.|++||+|+||+||+|||+++|..|++.||||++||++|++|+.+|+|++.|+
T Consensus 233 LGWml~~~~W~ELsp~wP~~fWDDWmr~pe~rK~R~cIRPEiSRTmtyg~~G~S~GQfFsd~L~~IK~n~~~v~fs~i~l 312 (411)
T KOG1413|consen 233 LGWMLTKKLWEELSPKWPVAFWDDWMRIPENRKGRQCIRPEISRTMTYGKKGSSEGQFFSDYLEKIKANDQQVKFSKIDL 312 (411)
T ss_pred chHHHHHHHHHhhCCCCcccchhhhhhchhhhccccccChHhhhhhhcccccccccccHHHHHHHhhhhhhhccccccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchHHHHHHHHHHHHhcCccccchhhhccCCCCceEEEEecChhHHHHHHHHhCccccCCCCCCCcCceeEEEEEEcC
Q 019888 235 SYLIKDNYEKYFAEIVKKATPVHGENVVLKAHDIEGDVRIEYKDQSHFEIIARQFGIFNEWKDGIPRTAYKGVVVFRYQT 314 (334)
Q Consensus 235 ~~l~~~~Yd~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~i~y~~~~~~~~~a~~~~~~~~~~~g~~R~~y~gvv~~~~~~ 314 (334)
+||.+++|++.+...|++|.+++.++...+..+.++.|||+|++..+|.++|+.||+|+|||+|||||||.|||+|+++
T Consensus 313 ~ylqk~~y~~~~~~~I~~ar~id~e~~~~~~~k~~~~vrI~Y~~~~e~~r~ak~l~lm~d~k~GvpRtaY~GiVt~~in- 391 (411)
T KOG1413|consen 313 SYLQKSNYDKLFSIEIMRARPIDLEKLILDRDKSEGDVRIQYTNIMEFSRVAKELGLMHDLKKGVPRTAYIGIVTFLIN- 391 (411)
T ss_pred HhhhhhhhhhHHHHHHHhcCcccHHHhhhhhhccccceeEEecchHHHHHHHHHhccHHHHhccCcccccceEEEEEEc-
Confidence 9999999999999999999999999988877666778999999999999999999999999999999999999999999
Q ss_pred CcEEEEEcCCCccccCcC
Q 019888 315 PRRIFLVGPDSLRQLGIK 332 (334)
Q Consensus 315 ~~~v~l~~~~~~~~~~~~ 332 (334)
|+||||||+.|+.+++++
T Consensus 392 ~~Rv~Lvp~~s~~~y~~~ 409 (411)
T KOG1413|consen 392 GRRVFLVPPVSVMGYDIS 409 (411)
T ss_pred ceEEEecCCccccccCCC
Confidence 899999999997766654
No 4
>PF05060 MGAT2: N-acetylglucosaminyltransferase II (MGAT2); InterPro: IPR007754 N-acetylglucosaminyltransferase II (2.4.1.143 from EC) is a Golgi resident enzyme that catalyzes an essential step in the biosynthetic pathway leading from high mannose to complex N-linked oligosaccharides []. Mutations in the MGAT2 gene lead to a congenital disorder of glycosylation (CDG IIa). CDG IIa patients have an increased bleeding tendency, unrelated to coagulation factors []. Synonym(s): UDP-N-acetyl-D-glucosamine:alpha-6-D-mannoside beta-1,2-N- acetylglucosaminyltransferase II, GnT II/MGAT2.; GO: 0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0009312 oligosaccharide biosynthetic process, 0005795 Golgi stack, 0016021 integral to membrane
Probab=99.79 E-value=2.3e-18 Score=166.65 Aligned_cols=199 Identities=24% Similarity=0.406 Sum_probs=150.1
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCcceEEecc--------------CCCCCCCCCC
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKLTYMQHLD--------------FEPVHADNPG 67 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~~~i~~~~--------------~~~~~~~~~~ 67 (334)
+.|||+||+.+|+||.++++ .++.-|+||.|+..+|+.++|++++ ||-+.|++ .+|+ .|++
T Consensus 39 VH~r~~yl~~li~sL~~~~~--I~~~llifSHd~~~~ein~~v~~I~-Fc~v~QIf~P~S~ql~p~~FPG~dP~--DCpr 113 (356)
T PF05060_consen 39 VHNRPEYLKLLIDSLSQARG--IEEALLIFSHDFYSEEINDLVQSID-FCRVMQIFYPYSIQLYPNEFPGQDPN--DCPR 113 (356)
T ss_pred ECCcHHHHHHHHHHHHHhhC--ccceEEEEeccCChHHHHHHHHhCC-cceeEEEecccchhhCCCCCCCCCcc--cccc
Confidence 57999999999999999995 6899999999999999999999987 77766543 1121 2221
Q ss_pred c------------------------hhHHHHHHHHHHHHHHHHhhhcC-----ccEEEEEccCceeChhHHHHHHHHHHh
Q 019888 68 E------------------------LTAYYKIARHYKWALDNLFYKHN-----FSRVIILEDDMEIAPDFFDYFEAAADL 118 (334)
Q Consensus 68 ~------------------------~~~y~~ia~Hyk~al~~vF~~~~-----~~~vIiLEDDl~~sPdFf~y~~~~l~~ 118 (334)
+ -..+..|.+|+.|.++.||+.+. .+.||+||||-.++|||+..+..+..+
T Consensus 114 ~i~k~~a~~~~C~na~~pD~yGhyRea~~tq~KHHWWWk~n~Vf~~l~~~~~~~g~v~fLEEDhyv~pD~l~~l~~~~~~ 193 (356)
T PF05060_consen 114 DIKKEDALKLGCNNAEYPDSYGHYREAKFTQIKHHWWWKLNFVFDGLEETRNHNGWVLFLEEDHYVAPDFLHVLRLMIKL 193 (356)
T ss_pred cccHhHHHhccCCCCCCccccCCcccccchhhhHHHHHHHHHHHHhhhhhccCCceEEEEecccccchhHHHHHHHHHHH
Confidence 0 12457899999999999999752 478999999999999999988877666
Q ss_pred h---cCCCCEEEEeCCCC-CCCccccCCCce----eeecCCCCcccccccchhhhhhCC------CCCchhHHHHHhh--
Q 019888 119 L---DKDKSIMAVSSWND-NGQKQFVHDPYV----LYRSDFFPGLGWMLTRTTWDELSP------KWPKAYWDDWLRL-- 182 (334)
Q Consensus 119 y---~~D~~I~~ISa~nd-ng~~~~~~~~~~----lyrs~~fp~~GW~~~r~~W~el~~------~wp~~~Wd~wlr~-- 182 (334)
- ..+..|.+.++|.- ++.. .++.. -+.| ..+..|-|+.|++|+.+.. .+.+..||--|..
T Consensus 194 ~~~~cp~c~~~sLG~y~~~~~~~---~~~~~v~~~~W~S-skHNmGmAfNRs~W~kI~~ca~~FC~yDDYNWDwSL~~ls 269 (356)
T PF05060_consen 194 KKSECPDCDILSLGTYDKSNGYQ---SDPNKVEVTPWIS-SKHNMGMAFNRSTWNKIKSCADEFCTYDDYNWDWSLQHLS 269 (356)
T ss_pred hhhcCCCCCEEeccCCccccccc---cccceeeeecccc-ccccceeEecHHHHHHHHHHHHHhCCCCCCCchHHHHHHH
Confidence 4 35677888888863 2222 12212 2222 2358999999999998774 2566677554433
Q ss_pred -hhhhcCCeeEeecccccccccCcCCCc
Q 019888 183 -KENHKGRQFIRPEVCRTYNFGEHGSSL 209 (334)
Q Consensus 183 -~~~rk~r~cI~P~isrt~n~G~~G~~~ 209 (334)
+...+....+.|..+|+.|+|..|.|.
T Consensus 270 ~~cl~~~~kvL~~~~PRV~HiGdCGlH~ 297 (356)
T PF05060_consen 270 QRCLPSPLKVLVPKGPRVFHIGDCGLHH 297 (356)
T ss_pred hhccCCccEEEEEccCcEEEcccccccc
Confidence 345566778899999999999999985
No 5
>KOG2791 consensus N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism]
Probab=99.68 E-value=3.3e-16 Score=148.67 Aligned_cols=203 Identities=20% Similarity=0.361 Sum_probs=150.9
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCcceEEeccCC--------------CC------
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKLTYMQHLDFE--------------PV------ 61 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~~~i~~~~~~--------------~~------ 61 (334)
+.|||+||+-++|||+++++ .++.-|++|.||..+|+.++|+++. ||.+.|++.. ++
T Consensus 125 VHnRp~Ylr~lveSlrk~kG--I~~tLlifSHD~~~~eiN~~I~~i~-Fc~V~QiF~Pys~qlypt~FPG~~p~DCp~km 201 (455)
T KOG2791|consen 125 VHNRPQYLRVLVESLRKVKG--ISETLLIFSHDGYFEEINRIIESIK-FCQVKQIFSPYSPQLYPTSFPGVTPNDCPNKM 201 (455)
T ss_pred EcCcHHHHHHHHHHHHhccC--ccceEEEEeccchHHHHHHHHhhcc-cceeEEEecCCCcccccCcCCCCCchhccccc
Confidence 47999999999999999996 5899999999999999999999987 8887765421 11
Q ss_pred ------CCCCCC-----ch-----hHHHHHHHHHHHHHHHHhhhc-----CccEEEEEccCceeChhHHHHHHHHHHh--
Q 019888 62 ------HADNPG-----EL-----TAYYKIARHYKWALDNLFYKH-----NFSRVIILEDDMEIAPDFFDYFEAAADL-- 118 (334)
Q Consensus 62 ------~~~~~~-----~~-----~~y~~ia~Hyk~al~~vF~~~-----~~~~vIiLEDDl~~sPdFf~y~~~~l~~-- 118 (334)
.++|.+ ++ ....++.+|+.|-++.||+.. ..+.+.+||+|..++|||+.-+..+..+
T Consensus 202 kk~~a~k~~C~n~ssPD~yGnyR~ak~~q~KHHWWWkmnfVwd~ve~~~~~~g~iLflEEDH~LaPdayhv~~~l~~lkp 281 (455)
T KOG2791|consen 202 KKGDAAKGHCENNSSPDQYGNYRSAKIVQLKHHWWWKMNFVWDGVEETKGHEGHILFLEEDHFLAPDAYHVIQTLTRLKP 281 (455)
T ss_pred ccchhhhcCCcCCCCcccccCccchhhhhhhhhhhHhHHHHHHHHHHhccCCceEEEEecccccChhHHHHHHHHHhcCc
Confidence 011111 11 233678999999999999854 2588999999999999999999876544
Q ss_pred -hcCCCCEEEEeCCC-CC--CCccccCCCceeeecCCCCcccccccchhhhhhCC------CCCchhHHH--H-Hhhhhh
Q 019888 119 -LDKDKSIMAVSSWN-DN--GQKQFVHDPYVLYRSDFFPGLGWMLTRTTWDELSP------KWPKAYWDD--W-LRLKEN 185 (334)
Q Consensus 119 -y~~D~~I~~ISa~n-dn--g~~~~~~~~~~lyrs~~fp~~GW~~~r~~W~el~~------~wp~~~Wd~--w-lr~~~~ 185 (334)
+..|..+.+..-|- -+ |+.+ -...++.+ .++..|.|+.|.+|+.+.. +|.+..||= | +--++.
T Consensus 282 ~~Cp~C~~~sLg~y~s~sryGqD~---~~v~~w~s-~~hNmG~al~rn~wqki~~c~~~FC~~DDYNWDwtl~~~~~~cl 357 (455)
T KOG2791|consen 282 AKCPDCFAASLGPYDSKSRYGQDE---GLVSLWAS-RMHNMGYALNRNVWQKIHQCAREFCFFDDYNWDWTLWATVFPCL 357 (455)
T ss_pred ccCCcceeeecccccccccccccc---cceeehhh-hcccchhhhhHHHHHHHHHhHHhhcccccCCcceeehhhhcccc
Confidence 56777777666662 11 2111 01133433 4678999999999997663 366666642 2 234678
Q ss_pred hcCCeeEeecccccccccCcCCCcch
Q 019888 186 HKGRQFIRPEVCRTYNFGEHGSSLGQ 211 (334)
Q Consensus 186 rk~r~cI~P~isrt~n~G~~G~~~~~ 211 (334)
.+-...|+|.+.|+.|+|..|.|.+.
T Consensus 358 p~~~~vl~~~~pr~~H~GdCG~H~~~ 383 (455)
T KOG2791|consen 358 PSPVYVLRGPRPRAVHFGDCGLHQGR 383 (455)
T ss_pred CcceEEeecCCCceEEecccccccCC
Confidence 88889999999999999999999874
No 6
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.93 E-value=2.4e-08 Score=88.38 Aligned_cols=135 Identities=14% Similarity=0.215 Sum_probs=92.1
Q ss_pred CcccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCcceEEeccCCCCCCCCCCchhHHHHHHHHHH
Q 019888 1 MACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKLTYMQHLDFEPVHADNPGELTAYYKIARHYK 80 (334)
Q Consensus 1 ia~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk 80 (334)
.+||+++.|.+||+||+++..+ .++|+|..||+...+.++++++.....++.+..++| .|.+.. .+
T Consensus 4 ~~~n~~~~l~~~l~sl~~q~~~---~~eiiivD~~s~d~t~~~~~~~~~~~~i~~~~~~~n-~g~~~~----------~n 69 (202)
T cd04185 4 VTYNRLDLLKECLDALLAQTRP---PDHIIVIDNASTDGTAEWLTSLGDLDNIVYLRLPEN-LGGAGG----------FY 69 (202)
T ss_pred EeeCCHHHHHHHHHHHHhccCC---CceEEEEECCCCcchHHHHHHhcCCCceEEEECccc-cchhhH----------HH
Confidence 4799999999999999998753 468999999999999999998764322333333333 233221 22
Q ss_pred HHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCCCCCCCccccCCCceeeecCCCCccccccc
Q 019888 81 WALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSWNDNGQKQFVHDPYVLYRSDFFPGLGWMLT 160 (334)
Q Consensus 81 ~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~ndng~~~~~~~~~~lyrs~~fp~~GW~~~ 160 (334)
.|++.+. ..+++.++++++|+.+.|+++.-+.+.+ + ++.+.++.+.-... +. +..|+++.
T Consensus 70 ~~~~~a~-~~~~d~v~~ld~D~~~~~~~l~~l~~~~---~-~~~~~~~~~~~~~~------~~---------~~~~~~~~ 129 (202)
T cd04185 70 EGVRRAY-ELGYDWIWLMDDDAIPDPDALEKLLAYA---D-KDNPQFLAPLVLDP------DG---------SFVGVLIS 129 (202)
T ss_pred HHHHHHh-ccCCCEEEEeCCCCCcChHHHHHHHHHH---h-cCCceEecceeEcC------CC---------ceEEEEEe
Confidence 3555554 2358999999999999999987666654 3 56665554421110 11 45778899
Q ss_pred chhhhhhCC
Q 019888 161 RTTWDELSP 169 (334)
Q Consensus 161 r~~W~el~~ 169 (334)
|+.|+++.-
T Consensus 130 ~~~~~~~g~ 138 (202)
T cd04185 130 RRVVEKIGL 138 (202)
T ss_pred HHHHHHhCC
Confidence 999987653
No 7
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.91 E-value=3.3e-08 Score=83.32 Aligned_cols=124 Identities=13% Similarity=0.135 Sum_probs=89.3
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCcceEEeccCCCCCCCCCCchhHHHHHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKLTYMQHLDFEPVHADNPGELTAYYKIARHYKW 81 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk~ 81 (334)
+|||++.+.++|+||.++.. ....|+|..||+.+++.+.++.... .++....+.+ .|..+
T Consensus 5 ~~~~~~~l~~~l~sl~~~~~---~~~~iiivdd~s~~~~~~~~~~~~~--~~~~~~~~~~-~g~~~-------------- 64 (166)
T cd04186 5 NYNSLEYLKACLDSLLAQTY---PDFEVIVVDNASTDGSVELLRELFP--EVRLIRNGEN-LGFGA-------------- 64 (166)
T ss_pred ecCCHHHHHHHHHHHHhccC---CCeEEEEEECCCCchHHHHHHHhCC--CeEEEecCCC-cChHH--------------
Confidence 79999999999999999863 4668999999999888888876542 2332222232 23221
Q ss_pred HHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCCCCCCCccccCCCceeeecCCCCcccccccc
Q 019888 82 ALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSWNDNGQKQFVHDPYVLYRSDFFPGLGWMLTR 161 (334)
Q Consensus 82 al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~ndng~~~~~~~~~~lyrs~~fp~~GW~~~r 161 (334)
|++..+...+++.++++|||+.++|+++..+.+. +...+.+..+++- ..|-++++.+
T Consensus 65 a~n~~~~~~~~~~i~~~D~D~~~~~~~l~~~~~~---~~~~~~~~~~~~~--------------------~~~~~~~~~~ 121 (166)
T cd04186 65 GNNQGIREAKGDYVLLLNPDTVVEPGALLELLDA---AEQDPDVGIVGPK--------------------VSGAFLLVRR 121 (166)
T ss_pred HhhHHHhhCCCCEEEEECCCcEECccHHHHHHHH---HHhCCCceEEEcc--------------------CceeeEeeeH
Confidence 4455555446999999999999999998777664 4566777767665 3456667777
Q ss_pred hhhhhhC
Q 019888 162 TTWDELS 168 (334)
Q Consensus 162 ~~W~el~ 168 (334)
+.|+++.
T Consensus 122 ~~~~~~~ 128 (166)
T cd04186 122 EVFEEVG 128 (166)
T ss_pred HHHHHcC
Confidence 7887654
No 8
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.80 E-value=1.1e-07 Score=84.10 Aligned_cols=174 Identities=20% Similarity=0.152 Sum_probs=105.0
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCc--ceEEeccCCCCCCCCCCchhHHHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKL--TYMQHLDFEPVHADNPGELTAYYKIARHY 79 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~--~~i~~~~~~~~~~~~~~~~~~y~~ia~Hy 79 (334)
+|||++.|.+||+||+++.. ..++|+|..||+.+++.++++.+..- ..+.....+.+ .|. ++..
T Consensus 6 ~yn~~~~l~~~l~sl~~q~~---~~~eiiVvddgS~d~t~~~~~~~~~~~~~~~~~~~~~~~-~G~----------~~~~ 71 (214)
T cd04196 6 TYNGEKYLREQLDSILAQTY---KNDELIISDDGSTDGTVEIIKEYIDKDPFIIILIRNGKN-LGV----------ARNF 71 (214)
T ss_pred ecCcHHHHHHHHHHHHhCcC---CCeEEEEEeCCCCCCcHHHHHHHHhcCCceEEEEeCCCC-ccH----------HHHH
Confidence 79999999999999999874 36899999999988888888876421 12222222232 122 3333
Q ss_pred HHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCCC----CCCCcccc----CC-------Cc
Q 019888 80 KWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSWN----DNGQKQFV----HD-------PY 144 (334)
Q Consensus 80 k~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~n----dng~~~~~----~~-------~~ 144 (334)
+.|+. .-+.+.++++++|..+.|+++.-+.+. +..++...++.+.- ..+..... .. ..
T Consensus 72 n~g~~----~~~g~~v~~ld~Dd~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (214)
T cd04196 72 ESLLQ----AADGDYVFFCDQDDIWLPDKLERLLKA---FLKDDKPLLVYSDLELVDENGNPIGESFFEYQKIKPGTSFN 144 (214)
T ss_pred HHHHH----hCCCCEEEEECCCcccChhHHHHHHHH---HhcCCCceEEecCcEEECCCCCCcccccccccccCCccCHH
Confidence 33433 334899999999999999998766665 34566665555531 11111000 00 01
Q ss_pred eeeecCCCCcccccccchhhhhhCCCCCc--hhHHHHHhhhhhhcCCeeEeecc
Q 019888 145 VLYRSDFFPGLGWMLTRTTWDELSPKWPK--AYWDDWLRLKENHKGRQFIRPEV 196 (334)
Q Consensus 145 ~lyrs~~fp~~GW~~~r~~W~el~~~wp~--~~Wd~wlr~~~~rk~r~cI~P~i 196 (334)
.++....+++-+.+++|+.++++.+.-+. .+.|.++.....+.+.....|+.
T Consensus 145 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 198 (214)
T cd04196 145 NLLFQNVVTGCTMAFNRELLELALPFPDADVIMHDWWLALLASAFGKVVFLDEP 198 (214)
T ss_pred HHHHhCccCCceeeEEHHHHHhhccccccccccchHHHHHHHHHcCceEEcchh
Confidence 11223355677888999999886553332 23233443333445554555654
No 9
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=98.74 E-value=1.6e-07 Score=83.32 Aligned_cols=171 Identities=15% Similarity=0.181 Sum_probs=105.6
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCC----CcceEEeccCCCCCCCCCCchhHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYD----KLTYMQHLDFEPVHADNPGELTAYYKIAR 77 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~----~~~~i~~~~~~~~~~~~~~~~~~y~~ia~ 77 (334)
+||..+.|.++|+||+++..+ .++|+|..|++..++.++++.+. .. .++....+.+ .|..+. +.
T Consensus 9 ~~n~~~~l~~~L~sl~~q~~~---~~eiivVdd~s~d~t~~~~~~~~~~~~~~-~~~~~~~~~~-~g~~~~-------~~ 76 (196)
T cd02520 9 LCGVDPNLYENLESFFQQDYP---KYEILFCVQDEDDPAIPVVRKLIAKYPNV-DARLLIGGEK-VGINPK-------VN 76 (196)
T ss_pred cCCCCccHHHHHHHHHhccCC---CeEEEEEeCCCcchHHHHHHHHHHHCCCC-cEEEEecCCc-CCCCHh-------HH
Confidence 689999999999999998753 48999999999888777776542 11 1211111121 122111 11
Q ss_pred HHHHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCCCCCCCccccCCCceeeecCCCCcccc
Q 019888 78 HYKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSWNDNGQKQFVHDPYVLYRSDFFPGLGW 157 (334)
Q Consensus 78 Hyk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~ndng~~~~~~~~~~lyrs~~fp~~GW 157 (334)
+++..+..-.++.++++++|+.++|+++..+.+.+ .++.+.+|++. +..|-+.
T Consensus 77 ----~~n~g~~~a~~d~i~~~D~D~~~~~~~l~~l~~~~----~~~~~~~v~~~-------------------~~~g~~~ 129 (196)
T cd02520 77 ----NLIKGYEEARYDILVISDSDISVPPDYLRRMVAPL----MDPGVGLVTCL-------------------CAFGKSM 129 (196)
T ss_pred ----HHHHHHHhCCCCEEEEECCCceEChhHHHHHHHHh----hCCCCCeEEee-------------------cccCcee
Confidence 33444444458999999999999999998777653 46778888876 2345566
Q ss_pred cccchhhhhhCC--CCCch-hHHHHHhhhhhhcCCeeEeecccccccccCcCCCcchhh
Q 019888 158 MLTRTTWDELSP--KWPKA-YWDDWLRLKENHKGRQFIRPEVCRTYNFGEHGSSLGQFF 213 (334)
Q Consensus 158 ~~~r~~W~el~~--~wp~~-~Wd~wlr~~~~rk~r~cI~P~isrt~n~G~~G~~~~~~~ 213 (334)
|+.|+.|+++.. ..+.. ..|.++-....++|..+.+..-..+.+.+ +.+...++
T Consensus 130 ~~r~~~~~~~ggf~~~~~~~~eD~~l~~rl~~~G~~i~~~~~~~~~~~~--~~~~~~~~ 186 (196)
T cd02520 130 ALRREVLDAIGGFEAFADYLAEDYFLGKLIWRLGYRVVLSPYVVMQPLG--STSLASFW 186 (196)
T ss_pred eeEHHHHHhccChHHHhHHHHHHHHHHHHHHHcCCeEEEcchheeccCC--cccHHHHH
Confidence 777888876542 11211 23444444456677666553334554444 33444444
No 10
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.70 E-value=3.1e-07 Score=79.71 Aligned_cols=175 Identities=21% Similarity=0.182 Sum_probs=108.1
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCc-ceEEeccCCCCCCCCCCchhHHHHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKL-TYMQHLDFEPVHADNPGELTAYYKIARHYK 80 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~-~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk 80 (334)
+||+++.|.+||+||.++.. ..++|+|..||+..++.++++++..- ..+. .+++ .| .+..++
T Consensus 6 ~~n~~~~l~~~l~sl~~q~~---~~~evivvDd~s~d~~~~~~~~~~~~~~~~~---~~~~-~g----------~~~a~n 68 (202)
T cd06433 6 TYNQAETLEETIDSVLSQTY---PNIEYIVIDGGSTDGTVDIIKKYEDKITYWI---SEPD-KG----------IYDAMN 68 (202)
T ss_pred ccchHHHHHHHHHHHHhCCC---CCceEEEEeCCCCccHHHHHHHhHhhcEEEE---ecCC-cC----------HHHHHH
Confidence 79999999999999998874 23899999999999999999887531 2222 1222 12 233344
Q ss_pred HHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCCC----CCCCcccc-----CCCceeeecCC
Q 019888 81 WALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSWN----DNGQKQFV-----HDPYVLYRSDF 151 (334)
Q Consensus 81 ~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~n----dng~~~~~-----~~~~~lyrs~~ 151 (334)
.|+..+ +.+.++++++|+.+.|+.+.-+.. .+..++.+.+|+|.- .++..... .....+....+
T Consensus 69 ~~~~~a----~~~~v~~ld~D~~~~~~~~~~~~~---~~~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (202)
T cd06433 69 KGIALA----TGDIIGFLNSDDTLLPGALLAVVA---AFAEHPEVDVVYGDVLLVDENGRVIGRRRPPPFLDKFLLYGMP 141 (202)
T ss_pred HHHHHc----CCCEEEEeCCCcccCchHHHHHHH---HHHhCCCccEEEeeeEEEcCCCCcccCCCCcchhhhHHhhcCc
Confidence 455443 489999999999999988766652 234455555555432 12211111 01113334446
Q ss_pred CCcccccccchhhhhhCCCCCc-----hhHHHHHhhhhhhcCCee-Eeeccccccccc
Q 019888 152 FPGLGWMLTRTTWDELSPKWPK-----AYWDDWLRLKENHKGRQF-IRPEVCRTYNFG 203 (334)
Q Consensus 152 fp~~GW~~~r~~W~el~~~wp~-----~~Wd~wlr~~~~rk~r~c-I~P~isrt~n~G 203 (334)
+++-|+++.|+.|+++.. |+. ..|+-|+| ..+.|..- ..|+.-.....+
T Consensus 142 ~~~~~~~~~~~~~~~~~~-f~~~~~~~~D~~~~~r--~~~~g~~~~~~~~~~~~~~~~ 196 (202)
T cd06433 142 ICHQATFFRRSLFEKYGG-FDESYRIAADYDLLLR--LLLAGKIFKYLPEVLAAFRLG 196 (202)
T ss_pred ccCcceEEEHHHHHHhCC-CchhhCchhhHHHHHH--HHHcCCceEecchhhhhheec
Confidence 678888999999998753 332 13444455 44455544 446554444444
No 11
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=98.68 E-value=3.2e-07 Score=79.36 Aligned_cols=135 Identities=16% Similarity=0.154 Sum_probs=82.9
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCC--cceEEeccCCCCCCCCCCchhHHHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDK--LTYMQHLDFEPVHADNPGELTAYYKIARHY 79 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~--~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hy 79 (334)
+||+++.|++||+||.++.. ..++|+|..||+...+.++++.+.. -..+.+...... +. ..+...
T Consensus 5 ~~n~~~~l~~~l~sl~~q~~---~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~--~~--------~~~~~~ 71 (182)
T cd06420 5 TYNRPEALELVLKSVLNQSI---LPFEVIIADDGSTEETKELIEEFKSQFPIPIKHVWQEDE--GF--------RKAKIR 71 (182)
T ss_pred ecCChHHHHHHHHHHHhccC---CCCEEEEEeCCCchhHHHHHHHHHhhcCCceEEEEcCCc--ch--------hHHHHH
Confidence 79999999999999999874 4578999999999888888876532 011122111111 11 223323
Q ss_pred HHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCCCCCCCccccCCCceeeecCCCCcccccc
Q 019888 80 KWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSWNDNGQKQFVHDPYVLYRSDFFPGLGWML 159 (334)
Q Consensus 80 k~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~ndng~~~~~~~~~~lyrs~~fp~~GW~~ 159 (334)
+.|+.. -..+.+++|++|+.++|+|+.-+.+.+ ++.+.. +|-........ . . ..+.+-+.++
T Consensus 72 n~g~~~----a~g~~i~~lD~D~~~~~~~l~~~~~~~-----~~~~~v-~g~~~~~~~~~---~-~----~~~~~~~~~~ 133 (182)
T cd06420 72 NKAIAA----AKGDYLIFIDGDCIPHPDFIADHIELA-----EPGVFL-SGSRVLLNEKL---T-E----RGIRGCNMSF 133 (182)
T ss_pred HHHHHH----hcCCEEEEEcCCcccCHHHHHHHHHHh-----CCCcEE-ecceeeccccc---c-e----eEeccceEEE
Confidence 334433 348999999999999999988666543 344443 33222111100 0 0 2334556678
Q ss_pred cchhhhhh
Q 019888 160 TRTTWDEL 167 (334)
Q Consensus 160 ~r~~W~el 167 (334)
+|+.|.++
T Consensus 134 ~r~~~~~~ 141 (182)
T cd06420 134 WKKDLLAV 141 (182)
T ss_pred EHHHHHHh
Confidence 88888753
No 12
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=98.65 E-value=3.2e-07 Score=76.62 Aligned_cols=112 Identities=21% Similarity=0.186 Sum_probs=78.3
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCc--ceEEeccCCCCCCCCCCchhHHHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKL--TYMQHLDFEPVHADNPGELTAYYKIARHY 79 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~--~~i~~~~~~~~~~~~~~~~~~y~~ia~Hy 79 (334)
+|||+++|.+||+||+++.. ..+.|+|..||+..++.+++..+... ..+.....+++ .|. ++-.
T Consensus 5 ~~n~~~~l~~~l~sl~~q~~---~~~~iivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~-~g~----------~~~~ 70 (180)
T cd06423 5 AYNEEAVIERTIESLLALDY---PKLEVIVVDDGSTDDTLEILEELAALYIRRVLVVRDKEN-GGK----------AGAL 70 (180)
T ss_pred ccChHHHHHHHHHHHHhCCC---CceEEEEEeCCCccchHHHHHHHhccccceEEEEEeccc-CCc----------hHHH
Confidence 79999999999999999763 56799999999988888888775421 11222222222 233 2223
Q ss_pred HHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCCCCC
Q 019888 80 KWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSWNDN 134 (334)
Q Consensus 80 k~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~ndn 134 (334)
++|+..+ +.+.++++++|..+.|+++.-+ +..+..++.+.+|++....
T Consensus 71 n~~~~~~----~~~~i~~~D~D~~~~~~~l~~~---~~~~~~~~~~~~v~~~~~~ 118 (180)
T cd06423 71 NAGLRHA----KGDIVVVLDADTILEPDALKRL---VVPFFADPKVGAVQGRVRV 118 (180)
T ss_pred HHHHHhc----CCCEEEEECCCCCcChHHHHHH---HHHhccCCCeeeEeeeEEE
Confidence 3355444 5899999999999999988777 2334567888888776543
No 13
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=98.63 E-value=1.1e-07 Score=79.51 Aligned_cols=96 Identities=23% Similarity=0.418 Sum_probs=67.8
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCC----CcceEEeccCCCCCCCCCCchhHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYD----KLTYMQHLDFEPVHADNPGELTAYYKIAR 77 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~----~~~~i~~~~~~~~~~~~~~~~~~y~~ia~ 77 (334)
+||++++|.+||+||+++. ...++|+|..||+..++.++++++. .+..+++ +.+. ..+.
T Consensus 6 ~~n~~~~l~~~l~sl~~q~---~~~~eiivvdd~s~d~~~~~~~~~~~~~~~i~~i~~---~~n~-----------g~~~ 68 (169)
T PF00535_consen 6 TYNEAEYLERTLESLLKQT---DPDFEIIVVDDGSTDETEEILEEYAESDPNIRYIRN---PENL-----------GFSA 68 (169)
T ss_dssp ESS-TTTHHHHHHHHHHHS---GCEEEEEEEECS-SSSHHHHHHHHHCCSTTEEEEEH---CCCS-----------HHHH
T ss_pred eeCCHHHHHHHHHHHhhcc---CCCEEEEEeccccccccccccccccccccccccccc---cccc-----------cccc
Confidence 7999999999999999994 3677999999999889999988863 2444432 2321 2333
Q ss_pred HHHHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHh
Q 019888 78 HYKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADL 118 (334)
Q Consensus 78 Hyk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~ 118 (334)
.++.|+..+ ..+.+++++||+++.|++++-+-+.+..
T Consensus 69 ~~n~~~~~a----~~~~i~~ld~D~~~~~~~l~~l~~~~~~ 105 (169)
T PF00535_consen 69 ARNRGIKHA----KGEYILFLDDDDIISPDWLEELVEALEK 105 (169)
T ss_dssp HHHHHHHH------SSEEEEEETTEEE-TTHHHHHHHHHHH
T ss_pred ccccccccc----ceeEEEEeCCCceEcHHHHHHHHHHHHh
Confidence 334455554 3689999999999999988777776654
No 14
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=98.61 E-value=3.8e-07 Score=81.96 Aligned_cols=111 Identities=18% Similarity=0.206 Sum_probs=76.8
Q ss_pred cccch-HHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCcceEEeccCCCCCCCCCCchhHHHHHHHHHH
Q 019888 2 ACNRA-NYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKLTYMQHLDFEPVHADNPGELTAYYKIARHYK 80 (334)
Q Consensus 2 a~NRp-~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk 80 (334)
+||++ +.|++||+||+++..+ .++++|+|..||+.+++.++++.+..-..++....+.+..+.. .
T Consensus 9 ~~n~~~~~l~~~l~sl~~q~~~-~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~~~----------~--- 74 (234)
T cd06421 9 TYNEPLEIVRKTLRAALAIDYP-HDKLRVYVLDDGRRPELRALAAELGVEYGYRYLTRPDNRHAKA----------G--- 74 (234)
T ss_pred cCCCcHHHHHHHHHHHHhcCCC-cccEEEEEEcCCCchhHHHHHHHhhcccCceEEEeCCCCCCcH----------H---
Confidence 68985 8899999999998864 3358999999999999999999875311122222222211111 1
Q ss_pred HHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeC
Q 019888 81 WALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSS 130 (334)
Q Consensus 81 ~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa 130 (334)
+++..+...+++.++++++|..+.|+++.-+.+.+ .+++.+.+|++
T Consensus 75 -~~n~~~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~---~~~~~~~~v~~ 120 (234)
T cd06421 75 -NLNNALAHTTGDFVAILDADHVPTPDFLRRTLGYF---LDDPKVALVQT 120 (234)
T ss_pred -HHHHHHHhCCCCEEEEEccccCcCccHHHHHHHHH---hcCCCeEEEec
Confidence 23333333358999999999999999887666654 55688888875
No 15
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=98.58 E-value=1.6e-06 Score=78.37 Aligned_cols=97 Identities=14% Similarity=0.169 Sum_probs=69.2
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCC-cceEEeccCCCCCCCCCCchhHHHHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDK-LTYMQHLDFEPVHADNPGELTAYYKIARHYK 80 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~-~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk 80 (334)
+||+++++.++|++|+++..+ ...++|+|..||+.+++.++++.+.. ...++.+.. ++. +.. .
T Consensus 8 ~~n~~~~l~~~l~sl~~q~~~-~~~~evivvd~~s~d~~~~~~~~~~~~~~~v~~i~~-~~~-~~~----------~--- 71 (249)
T cd02525 8 VRNEEKYIEELLESLLNQSYP-KDLIEIIVVDGGSTDGTREIVQEYAAKDPRIRLIDN-PKR-IQS----------A--- 71 (249)
T ss_pred cCCchhhHHHHHHHHHhccCC-CCccEEEEEeCCCCccHHHHHHHHHhcCCeEEEEeC-CCC-Cch----------H---
Confidence 799999999999999988753 46789999999999888888887653 112333221 111 221 1
Q ss_pred HHHHHHhhhcCccEEEEEccCceeChhHHHHHHHH
Q 019888 81 WALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAA 115 (334)
Q Consensus 81 ~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~ 115 (334)
|++..++..+++.++++++|+.+.|++++-+.+.
T Consensus 72 -a~N~g~~~a~~d~v~~lD~D~~~~~~~l~~~~~~ 105 (249)
T cd02525 72 -GLNIGIRNSRGDIIIRVDAHAVYPKDYILELVEA 105 (249)
T ss_pred -HHHHHHHHhCCCEEEEECCCccCCHHHHHHHHHH
Confidence 3333333335899999999999999999877753
No 16
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=98.52 E-value=1.6e-06 Score=81.40 Aligned_cols=176 Identities=16% Similarity=0.219 Sum_probs=102.3
Q ss_pred Ccccc-hHHHHHHHHHHHhcCCCCCCCccEEEEeCCCC--HHHHHHHhhCCCcceEEeccCCCCCCCCCCchhHHHHHHH
Q 019888 1 MACNR-ANYLERTINSVFKYQGSVASKYPLFVSQDGSN--PQVKSKALSYDKLTYMQHLDFEPVHADNPGELTAYYKIAR 77 (334)
Q Consensus 1 ia~NR-p~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~--~evr~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~ 77 (334)
+|||| ++.|++||+||.++.. .|+|..||+. +.+.++.+....+..++ .+.| .|.+ .
T Consensus 1 Vtyn~~~~~l~~~l~sl~~q~~------~iiVVDN~S~~~~~~~~~~~~~~~i~~i~---~~~N-~G~a----------~ 60 (281)
T TIGR01556 1 VTFNPDLEHLGELITSLPKQVD------RIIAVDNSPHSDQPLKNARLRGQKIALIH---LGDN-QGIA----------G 60 (281)
T ss_pred CccCccHHHHHHHHHHHHhcCC------EEEEEECcCCCcHhHHHHhccCCCeEEEE---CCCC-cchH----------H
Confidence 68999 6999999999998642 7999999964 35666666554444333 3343 3433 3
Q ss_pred HHHHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCC-CEEEEeCCCCC--CCcc--c------------c
Q 019888 78 HYKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDK-SIMAVSSWNDN--GQKQ--F------------V 140 (334)
Q Consensus 78 Hyk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~-~I~~ISa~ndn--g~~~--~------------~ 140 (334)
-++.|+..+.+. ++|.+++++||..+.|+++.-+.+. ++.++ .+.++++--.. +... . .
T Consensus 61 a~N~Gi~~a~~~-~~d~i~~lD~D~~~~~~~l~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (281)
T TIGR01556 61 AQNQGLDASFRR-GVQGVLLLDQDSRPGNAFLAAQWKL---LSAENGQACALGPRFFDRGTSRRLPAIHLDGLLLRQISL 136 (281)
T ss_pred HHHHHHHHHHHC-CCCEEEEECCCCCCCHHHHHHHHHH---HHhcCCceEEECCeEEcCCCcccCCceeecccceeeecc
Confidence 344477777643 5899999999999999988765554 44444 67666653211 1000 0 0
Q ss_pred CCCceeeecCCCCcccccccchhhhhhCCCCCch---hHHH---HHhhhhhhcCCee-Eeeccccccccc
Q 019888 141 HDPYVLYRSDFFPGLGWMLTRTTWDELSPKWPKA---YWDD---WLRLKENHKGRQF-IRPEVCRTYNFG 203 (334)
Q Consensus 141 ~~~~~lyrs~~fp~~GW~~~r~~W~el~~~wp~~---~Wd~---wlr~~~~rk~r~c-I~P~isrt~n~G 203 (334)
.........++..+-|.++.|+.++++.. +.+. +++| .+| ...+|..+ ..|++-..-..|
T Consensus 137 ~~~~~~~~~~~~~~sg~li~~~~~~~iG~-fde~~fi~~~D~e~~~R--~~~~G~~i~~~~~~~~~H~~g 203 (281)
T TIGR01556 137 DGLTTPQKTSFLISSGCLITREVYQRLGM-MDEELFIDHVDTEWSLR--AQNYGIPLYIDPDIVLEHRIG 203 (281)
T ss_pred cccCCceeccEEEcCcceeeHHHHHHhCC-ccHhhcccchHHHHHHH--HHHCCCEEEEeCCEEEEEecC
Confidence 01111122233345577899999987643 1111 2222 234 44566544 457664333334
No 17
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=98.50 E-value=1e-06 Score=79.47 Aligned_cols=106 Identities=14% Similarity=0.185 Sum_probs=73.3
Q ss_pred cccch-HHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCcceEEeccCCCCCCCCCCchhHHHHHHHHHH
Q 019888 2 ACNRA-NYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKLTYMQHLDFEPVHADNPGELTAYYKIARHYK 80 (334)
Q Consensus 2 a~NRp-~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk 80 (334)
+||++ +.|.+||++|.++. .++|+|..||+.+++.+.++.......+.... .++ .|..+
T Consensus 8 ~~ne~~~~l~~~l~sl~~q~-----~~eiivvdd~s~d~~~~~l~~~~~~~~~~v~~-~~~-~g~~~------------- 67 (235)
T cd06434 8 VYDEDPDVFRECLRSILRQK-----PLEIIVVTDGDDEPYLSILSQTVKYGGIFVIT-VPH-PGKRR------------- 67 (235)
T ss_pred ecCCChHHHHHHHHHHHhCC-----CCEEEEEeCCCChHHHHHHHhhccCCcEEEEe-cCC-CChHH-------------
Confidence 79999 99999999999876 34899999999888887753322212222221 222 23211
Q ss_pred HHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCCC
Q 019888 81 WALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSWN 132 (334)
Q Consensus 81 ~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~n 132 (334)
|++..+..-+++.++++++|+.+.|+++ +.++..+. ++.+.+|++-.
T Consensus 68 -a~n~g~~~a~~d~v~~lD~D~~~~~~~l---~~l~~~~~-~~~v~~v~~~~ 114 (235)
T cd06434 68 -ALAEGIRHVTTDIVVLLDSDTVWPPNAL---PEMLKPFE-DPKVGGVGTNQ 114 (235)
T ss_pred -HHHHHHHHhCCCEEEEECCCceeChhHH---HHHHHhcc-CCCEeEEcCce
Confidence 3333343335899999999999999986 45555566 89999998753
No 18
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=98.49 E-value=1.8e-06 Score=79.03 Aligned_cols=112 Identities=15% Similarity=0.073 Sum_probs=78.9
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCC--cceEEeccCCCCCCCCCCchhHHHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDK--LTYMQHLDFEPVHADNPGELTAYYKIARHY 79 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~--~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hy 79 (334)
+||..+.+.++|+||+++..+ ...++|+|..|++.+++.++++.+.. ...+.......+ .|.+ +
T Consensus 9 ~~Ne~~~l~~~l~sl~~~~y~-~~~~eiivVdd~s~d~t~~i~~~~~~~~~~~i~~~~~~~~-~G~~----~-------- 74 (241)
T cd06427 9 LYKEAEVLPQLIASLSALDYP-RSKLDVKLLLEEDDEETIAAARALRLPSIFRVVVVPPSQP-RTKP----K-------- 74 (241)
T ss_pred cCCcHHHHHHHHHHHHhCcCC-cccEEEEEEECCCCchHHHHHHHhccCCCeeEEEecCCCC-CchH----H--------
Confidence 799999999999999998753 35688999999999999999988642 112333221121 1221 1
Q ss_pred HHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCC
Q 019888 80 KWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSW 131 (334)
Q Consensus 80 k~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~ 131 (334)
|++..+..-..+.++++++|+.+.|+++.-+...+. +.++.+.++++.
T Consensus 75 --a~n~g~~~a~gd~i~~~DaD~~~~~~~l~~~~~~~~--~~~~~v~~~~~~ 122 (241)
T cd06427 75 --ACNYALAFARGEYVVIYDAEDAPDPDQLKKAVAAFA--RLDDKLACVQAP 122 (241)
T ss_pred --HHHHHHHhcCCCEEEEEcCCCCCChHHHHHHHHHHH--hcCCCEEEEeCc
Confidence 555555555689999999999999999874444332 345888888764
No 19
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=98.48 E-value=4.1e-06 Score=79.49 Aligned_cols=181 Identities=15% Similarity=0.099 Sum_probs=104.5
Q ss_pred cccch-HHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhC---CCcceEEeccCCCCCCCCCCchhHHHHHHH
Q 019888 2 ACNRA-NYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSY---DKLTYMQHLDFEPVHADNPGELTAYYKIAR 77 (334)
Q Consensus 2 a~NRp-~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~---~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~ 77 (334)
+||++ +.|.+||+||.++.++ ...++|+|..||+...+.+++... .....++.+..+.| .|. ++
T Consensus 6 ~~N~~~~~l~~~l~Sl~~~~~~-~~~~EIIvVDd~S~d~t~~~~~~~~~~~~~~~v~vi~~~~n-~G~----------~~ 73 (299)
T cd02510 6 FHNEALSTLLRTVHSVINRTPP-ELLKEIILVDDFSDKPELKLLLEEYYKKYLPKVKVLRLKKR-EGL----------IR 73 (299)
T ss_pred EecCcHHHHHHHHHHHHhcCch-hcCCEEEEEECCCCchHHHHHHHHHHhhcCCcEEEEEcCCC-CCH----------HH
Confidence 68999 9999999999988753 234699999999988877766431 11223443333333 232 22
Q ss_pred HHHHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCCC--------CCCCcc-----------
Q 019888 78 HYKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSWN--------DNGQKQ----------- 138 (334)
Q Consensus 78 Hyk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~n--------dng~~~----------- 138 (334)
-.+.|+..+ ..+.+++|++|+++.|++++-+-+.+ ..++......... ..+...
T Consensus 74 a~N~g~~~A----~gd~i~fLD~D~~~~~~wL~~ll~~l---~~~~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (299)
T cd02510 74 ARIAGARAA----TGDVLVFLDSHCEVNVGWLEPLLARI---AENRKTVVCPIIDVIDADTFEYRGSSGDARGGFDWSLH 146 (299)
T ss_pred HHHHHHHHc----cCCEEEEEeCCcccCccHHHHHHHHH---HhCCCeEEEeeeccccCCCeeEecCCCceeEEecccce
Confidence 223344443 48999999999999999986655544 4555543222111 111100
Q ss_pred ---c-c-------CCCceeeecCCCCcccccccchhhhhh---CCCCCc---hhHHHHHhhhhhhcCCeeEe-ecccccc
Q 019888 139 ---F-V-------HDPYVLYRSDFFPGLGWMLTRTTWDEL---SPKWPK---AYWDDWLRLKENHKGRQFIR-PEVCRTY 200 (334)
Q Consensus 139 ---~-~-------~~~~~lyrs~~fp~~GW~~~r~~W~el---~~~wp~---~~Wd~wlr~~~~rk~r~cI~-P~isrt~ 200 (334)
. . ..+...+++..++|-..|+.|+.|+++ ++.... ...|-++| ....|..+++ |+ +++.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~vGgfDe~~~~~~~ED~Dl~~R--~~~~G~~i~~~p~-a~v~ 223 (299)
T cd02510 147 FKWLPLPEEERRRESPTAPIRSPTMAGGLFAIDREWFLELGGYDEGMDIWGGENLELSFK--VWQCGGSIEIVPC-SRVG 223 (299)
T ss_pred eccccCCHHHhhhcCCCCCccCccccceeeEEEHHHHHHhCCCCCcccccCchhHHHHHH--HHHcCCeEEEeec-cEEE
Confidence 0 0 001123344455566678999999874 444332 23344454 4456666554 65 4566
Q ss_pred cccC
Q 019888 201 NFGE 204 (334)
Q Consensus 201 n~G~ 204 (334)
|++.
T Consensus 224 H~~~ 227 (299)
T cd02510 224 HIFR 227 (299)
T ss_pred Eecc
Confidence 6554
No 20
>PRK11204 N-glycosyltransferase; Provisional
Probab=98.47 E-value=7.1e-07 Score=88.66 Aligned_cols=109 Identities=15% Similarity=0.206 Sum_probs=79.3
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCC-cceEEeccCCCCCCCCCCchhHHHHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDK-LTYMQHLDFEPVHADNPGELTAYYKIARHYK 80 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~-~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk 80 (334)
+||+.+.+++||+||.++.++ +++|+|..||+.+++.++++++.. ...++....++| .|.+ .
T Consensus 62 ~yne~~~i~~~l~sl~~q~yp---~~eiiVvdD~s~d~t~~~l~~~~~~~~~v~~i~~~~n-~Gka----------~--- 124 (420)
T PRK11204 62 CYNEGENVEETISHLLALRYP---NYEVIAINDGSSDNTGEILDRLAAQIPRLRVIHLAEN-QGKA----------N--- 124 (420)
T ss_pred cCCCHHHHHHHHHHHHhCCCC---CeEEEEEECCCCccHHHHHHHHHHhCCcEEEEEcCCC-CCHH----------H---
Confidence 799999999999999998753 678999999999888888776532 112332222333 2321 1
Q ss_pred HHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCC
Q 019888 81 WALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSW 131 (334)
Q Consensus 81 ~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~ 131 (334)
|++..++.-++|.++++++|..+.||++..+.+. +++||++.+|+|-
T Consensus 125 -aln~g~~~a~~d~i~~lDaD~~~~~d~L~~l~~~---~~~~~~v~~v~g~ 171 (420)
T PRK11204 125 -ALNTGAAAARSEYLVCIDGDALLDPDAAAYMVEH---FLHNPRVGAVTGN 171 (420)
T ss_pred -HHHHHHHHcCCCEEEEECCCCCCChhHHHHHHHH---HHhCCCeEEEECC
Confidence 4444444445899999999999999998776654 4678999999874
No 21
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=98.47 E-value=1.1e-06 Score=80.23 Aligned_cols=108 Identities=19% Similarity=0.250 Sum_probs=76.5
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCcceEEeccCCCCCCCCCCchhHHHHHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKLTYMQHLDFEPVHADNPGELTAYYKIARHYKW 81 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk~ 81 (334)
+||+.+.|.+||++|.++..+ ...++|+|..||+.+.+.++++.+... .++....+++ .|..+
T Consensus 37 ~~n~~~~l~~~l~si~~q~~~-~~~~eiivvdd~s~d~t~~~~~~~~~~-~v~~i~~~~~-~g~~~-------------- 99 (251)
T cd06439 37 AYNEEAVIEAKLENLLALDYP-RDRLEIIVVSDGSTDGTAEIAREYADK-GVKLLRFPER-RGKAA-------------- 99 (251)
T ss_pred cCCcHHHHHHHHHHHHhCcCC-CCcEEEEEEECCCCccHHHHHHHHhhC-cEEEEEcCCC-CChHH--------------
Confidence 799999999999999998763 345899999999999999999887532 2333323333 23211
Q ss_pred HHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeC
Q 019888 82 ALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSS 130 (334)
Q Consensus 82 al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa 130 (334)
|++..+.....|.++++++|+.+.|+++.-+.+. +. ++.+.+|++
T Consensus 100 a~n~gi~~a~~d~i~~lD~D~~~~~~~l~~l~~~---~~-~~~~~~v~~ 144 (251)
T cd06439 100 ALNRALALATGEIVVFTDANALLDPDALRLLVRH---FA-DPSVGAVSG 144 (251)
T ss_pred HHHHHHHHcCCCEEEEEccccCcCHHHHHHHHHH---hc-CCCccEEEe
Confidence 4444444445799999999999999988766555 43 456665554
No 22
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=98.45 E-value=2.2e-06 Score=69.75 Aligned_cols=128 Identities=20% Similarity=0.190 Sum_probs=83.4
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCc-ceEEeccCCCCCCCCCCchhHHHHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKL-TYMQHLDFEPVHADNPGELTAYYKIARHYK 80 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~-~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk 80 (334)
++|+++.+..+|+++.++.. ....|+|..|++.+++.+.+.+.... ..+.......+ .+. +...+
T Consensus 5 ~~~~~~~l~~~l~s~~~~~~---~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~----------~~~~~ 70 (156)
T cd00761 5 AYNEEPYLERCLESLLAQTY---PNFEVIVVDDGSTDGTLEILEEYAKKDPRVIRVINEEN-QGL----------AAARN 70 (156)
T ss_pred ecCcHHHHHHHHHHHHhCCc---cceEEEEEeCCCCccHHHHHHHHHhcCCCeEEEEecCC-CCh----------HHHHH
Confidence 78999999999999999873 34589999999988888877765321 11111111111 121 22222
Q ss_pred HHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCCCCCCCccccCCCceeeecCCCCccccccc
Q 019888 81 WALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSWNDNGQKQFVHDPYVLYRSDFFPGLGWMLT 160 (334)
Q Consensus 81 ~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~ndng~~~~~~~~~~lyrs~~fp~~GW~~~ 160 (334)
.|+... +.+.++++++|+.+.|+++..+ +..+..++...++.+. .++++.
T Consensus 71 ~~~~~~----~~d~v~~~d~D~~~~~~~~~~~---~~~~~~~~~~~~v~~~-----------------------~~~~~~ 120 (156)
T cd00761 71 AGLKAA----RGEYILFLDADDLLLPDWLERL---VAELLADPEADAVGGP-----------------------GNLLFR 120 (156)
T ss_pred HHHHHh----cCCEEEEECCCCccCccHHHHH---HHHHhcCCCceEEecc-----------------------chheee
Confidence 344443 5899999999999999999886 2233455555555554 556677
Q ss_pred chhhhhhCCCCCc
Q 019888 161 RTTWDELSPKWPK 173 (334)
Q Consensus 161 r~~W~el~~~wp~ 173 (334)
++.|+++....+.
T Consensus 121 ~~~~~~~~~~~~~ 133 (156)
T cd00761 121 RELLEEIGGFDEA 133 (156)
T ss_pred HHHHHHhCCcchH
Confidence 7778776654433
No 23
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=98.42 E-value=4.2e-06 Score=73.56 Aligned_cols=172 Identities=19% Similarity=0.164 Sum_probs=97.7
Q ss_pred cccch-HHHHHHHHHHHhcCCCCCCCccEEEEeCCCCH-HHHHHHhhCCC-cceEEeccCCCCCCCCCCchhHHHHHHHH
Q 019888 2 ACNRA-NYLERTINSVFKYQGSVASKYPLFVSQDGSNP-QVKSKALSYDK-LTYMQHLDFEPVHADNPGELTAYYKIARH 78 (334)
Q Consensus 2 a~NRp-~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~-evr~vi~~~~~-~~~i~~~~~~~~~~~~~~~~~~y~~ia~H 78 (334)
+||+. +.|.+||+||+++.. ..++|+|..||+.. .+.++++.+.. -..++....+++ .|. ++
T Consensus 9 ~~n~~~~~l~~~l~sl~~q~~---~~~eiivvd~gs~d~~~~~~~~~~~~~~~~~~~~~~~~~-~g~----------~~- 73 (202)
T cd04184 9 VYNTPEKYLREAIESVRAQTY---PNWELCIADDASTDPEVKRVLKKYAAQDPRIKVVFREEN-GGI----------SA- 73 (202)
T ss_pred cccCcHHHHHHHHHHHHhCcC---CCeEEEEEeCCCCChHHHHHHHHHHhcCCCEEEEEcccC-CCH----------HH-
Confidence 69999 999999999999764 34789999999855 45566654421 112222222222 121 22
Q ss_pred HHHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCCCC----CCCcc-cc-CC--CceeeecC
Q 019888 79 YKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSWND----NGQKQ-FV-HD--PYVLYRSD 150 (334)
Q Consensus 79 yk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~nd----ng~~~-~~-~~--~~~lyrs~ 150 (334)
|++..+.....+.++++++|+.+.|+++.-+.+.+ +.++.+..|.+.-. ++... .. .. ....+...
T Consensus 74 ---a~n~g~~~a~~d~i~~ld~D~~~~~~~l~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (202)
T cd04184 74 ---ATNSALELATGEFVALLDHDDELAPHALYEVVKAL---NEHPDADLIYSDEDKIDEGGKRSEPFFKPDWSPDLLLSQ 147 (202)
T ss_pred ---HHHHHHHhhcCCEEEEECCCCcCChHHHHHHHHHH---HhCCCCCEEEccHHhccCCCCEeccccCCCCCHHHhhhc
Confidence 45555554458999999999999999997777654 33444433322111 11110 00 00 11122222
Q ss_pred CCCcccccccchhhhhhC---CCCCc-hhHHHHHhhhhhhcCC-eeEeecc
Q 019888 151 FFPGLGWMLTRTTWDELS---PKWPK-AYWDDWLRLKENHKGR-QFIRPEV 196 (334)
Q Consensus 151 ~fp~~GW~~~r~~W~el~---~~wp~-~~Wd~wlr~~~~rk~r-~cI~P~i 196 (334)
.+.+-+.++.|+.|+++. +.... ..||-|+|. ..+|. .+..|++
T Consensus 148 ~~~~~~~~~~r~~~~~iggf~~~~~~~eD~~l~~rl--~~~g~~~~~~~~~ 196 (202)
T cd04184 148 NYIGHLLVYRRSLVRQVGGFREGFEGAQDYDLVLRV--SEHTDRIAHIPRV 196 (202)
T ss_pred CCccceEeEEHHHHHHhCCCCcCcccchhHHHHHHH--HhccceEEEccHh
Confidence 334555678888998753 33322 366667774 23343 3445664
No 24
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.41 E-value=2.1e-06 Score=76.62 Aligned_cols=98 Identities=15% Similarity=0.148 Sum_probs=66.2
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHh-hCC-CcceEEeccCC--CCCCCCCCchhHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKAL-SYD-KLTYMQHLDFE--PVHADNPGELTAYYKIAR 77 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~-~~~-~~~~i~~~~~~--~~~~~~~~~~~~y~~ia~ 77 (334)
+||++++|.+||+||+++..+ .+.++|+|..||+.+.+.++++ ... .-..+.....+ .+ .|. +.
T Consensus 5 ~~n~~~~l~~~l~sl~~q~~~-~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~v~~~~~~~~~~-~g~----------~~ 72 (229)
T cd04192 5 ARNEAENLPRLLQSLSALDYP-KEKFEVILVDDHSTDGTVQILEFAAAKPNFQLKILNNSRVSI-SGK----------KN 72 (229)
T ss_pred ecCcHHHHHHHHHHHHhCCCC-CCceEEEEEcCCCCcChHHHHHHHHhCCCcceEEeeccCccc-chh----------HH
Confidence 799999999999999998864 3458999999999888887775 211 11122222211 11 111 11
Q ss_pred HHHHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHH
Q 019888 78 HYKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAA 115 (334)
Q Consensus 78 Hyk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~ 115 (334)
|++..+...+.+.++++++|+.++|++++-+.+.
T Consensus 73 ----a~n~g~~~~~~d~i~~~D~D~~~~~~~l~~l~~~ 106 (229)
T cd04192 73 ----ALTTAIKAAKGDWIVTTDADCVVPSNWLLTFVAF 106 (229)
T ss_pred ----HHHHHHHHhcCCEEEEECCCcccCHHHHHHHHHH
Confidence 4444444445899999999999999988766653
No 25
>PRK10018 putative glycosyl transferase; Provisional
Probab=98.41 E-value=1.1e-05 Score=76.78 Aligned_cols=183 Identities=14% Similarity=0.160 Sum_probs=101.7
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCC--HHHHHHHhhCCCcceEEeccCCCCCCCCCCchhHHHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSN--PQVKSKALSYDKLTYMQHLDFEPVHADNPGELTAYYKIARHY 79 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~--~evr~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hy 79 (334)
+||+++++.++|+||+++.. ..++|+|..||+. +.+.++++.+.. ..|+....+.|. |. +.
T Consensus 13 ~yN~~~~l~~~l~Svl~Qt~---~~~EiIVVDDgS~~~~~~~~~~~~~~~-~ri~~i~~~~n~-G~----------~~-- 75 (279)
T PRK10018 13 TWNRQQLAIRAIKSVLRQDY---SNWEMIIVDDCSTSWEQLQQYVTALND-PRITYIHNDINS-GA----------CA-- 75 (279)
T ss_pred eCCCHHHHHHHHHHHHhCCC---CCeEEEEEECCCCCHHHHHHHHHHcCC-CCEEEEECCCCC-CH----------HH--
Confidence 79999999999999999875 4689999999997 445667666543 123333233332 22 22
Q ss_pred HHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCC-CCCCC----cccc-CCC------ceee
Q 019888 80 KWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSW-NDNGQ----KQFV-HDP------YVLY 147 (334)
Q Consensus 80 k~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~-ndng~----~~~~-~~~------~~ly 147 (334)
|.+..+..-..+.+++|++|....|+.+.-+-+.+...... -++.+.. -..|. .... ..| ..++
T Consensus 76 --a~N~gi~~a~g~~I~~lDaDD~~~p~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 151 (279)
T PRK10018 76 --VRNQAIMLAQGEYITGIDDDDEWTPNRLSVFLAHKQQLVTH--AFLYANDYVCQGEVYSQPASLPLYPKSPYSRRLFY 151 (279)
T ss_pred --HHHHHHHHcCCCEEEEECCCCCCCccHHHHHHHHHHhCCCc--cEEEccceeecCcccccccccCCCCCCCCCHHHHH
Confidence 33333333358999999999999999987655544321111 1111110 01111 0000 001 1122
Q ss_pred ecCCCCcccccccchhhh--hhCCCCCc-hhHHHHHhhhhhhcCCeeEeecccccccccCcCC
Q 019888 148 RSDFFPGLGWMLTRTTWD--ELSPKWPK-AYWDDWLRLKENHKGRQFIRPEVCRTYNFGEHGS 207 (334)
Q Consensus 148 rs~~fp~~GW~~~r~~W~--el~~~wp~-~~Wd~wlr~~~~rk~r~cI~P~isrt~n~G~~G~ 207 (334)
+..+.+... +.++.... .+++..+. +.||-|+|.-. +-+..+..|+...+++++..+.
T Consensus 152 ~~n~ig~~~-~~~~~~~~~~~fd~~~~~~eDydlwlrl~~-~~~~~~~~~~~l~~y~~~~~s~ 212 (279)
T PRK10018 152 KRNIIGNQV-FTWAWRFKECLFDTELKAAQDYDIFLRMVV-EYGEPWKVEEATQILHINHGEM 212 (279)
T ss_pred HhcCcCcee-eehhhhhhhcccCCCCCccccHHHHHHHHH-hcCceEeeccceEEEEcCCCCc
Confidence 222333332 33333332 24455553 58999999632 2344455799877788765443
No 26
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=98.40 E-value=2.2e-06 Score=75.38 Aligned_cols=109 Identities=15% Similarity=0.200 Sum_probs=73.3
Q ss_pred cccch--HHHHHHHHHHHhcCCCCCCCccEEEEeCCC-CHHHHHHHhhCCCcceEEeccCCCCCCCCCCchhHHHHHHHH
Q 019888 2 ACNRA--NYLERTINSVFKYQGSVASKYPLFVSQDGS-NPQVKSKALSYDKLTYMQHLDFEPVHADNPGELTAYYKIARH 78 (334)
Q Consensus 2 a~NRp--~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~-~~evr~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~H 78 (334)
+||+. +++.+||+||+++..+ .++|+|..||+ ...+.++++++..-..++....+.| .|.. .
T Consensus 6 ~~n~~~~~~l~~~l~Sl~~q~~~---~~eiiivdd~ss~d~t~~~~~~~~~~~~i~~i~~~~n-~G~~----------~- 70 (201)
T cd04195 6 VYIKEKPEFLREALESILKQTLP---PDEVVLVKDGPVTQSLNEVLEEFKRKLPLKVVPLEKN-RGLG----------K- 70 (201)
T ss_pred ccccchHHHHHHHHHHHHhcCCC---CcEEEEEECCCCchhHHHHHHHHHhcCCeEEEEcCcc-ccHH----------H-
Confidence 67774 7999999999998742 46889999998 7778888887643111333322333 2321 1
Q ss_pred HHHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCC
Q 019888 79 YKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSW 131 (334)
Q Consensus 79 yk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~ 131 (334)
|.+..+..-..+.++++++|+.+.|+++.-+-+. +.+++.+..+++.
T Consensus 71 ---a~N~g~~~a~gd~i~~lD~Dd~~~~~~l~~~~~~---~~~~~~~~~~~~~ 117 (201)
T cd04195 71 ---ALNEGLKHCTYDWVARMDTDDISLPDRFEKQLDF---IEKNPEIDIVGGG 117 (201)
T ss_pred ---HHHHHHHhcCCCEEEEeCCccccCcHHHHHHHHH---HHhCCCeEEEccc
Confidence 3444444335899999999999999988766654 4556666555544
No 27
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=98.37 E-value=1.7e-06 Score=87.16 Aligned_cols=112 Identities=13% Similarity=0.134 Sum_probs=79.7
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCC-cceEEeccCCCCCCCCCCchhHHHHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDK-LTYMQHLDFEPVHADNPGELTAYYKIARHYK 80 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~-~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk 80 (334)
+||..+.+.+||+||.++.++ .+.++|+|..||+.+++.++++++.. ...+.....+++ .|. ++
T Consensus 57 ~yNe~~~l~~~l~sl~~q~yp-~~~~eIiVVDd~StD~T~~il~~~~~~~~~v~v~~~~~~-~Gk----------a~--- 121 (439)
T TIGR03111 57 VYNSEDTLFNCIESIYNQTYP-IELIDIILANNQSTDDSFQVFCRAQNEFPGLSLRYMNSD-QGK----------AK--- 121 (439)
T ss_pred eCCChHHHHHHHHHHHhcCCC-CCCeEEEEEECCCChhHHHHHHHHHHhCCCeEEEEeCCC-CCH----------HH---
Confidence 799999999999999998875 45678999999999998887764321 111211111222 122 22
Q ss_pred HHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCCC
Q 019888 81 WALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSWN 132 (334)
Q Consensus 81 ~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~n 132 (334)
|++..++..+.+.+++++.|+.+.||++.-+.+ .+++|+++.+++|.-
T Consensus 122 -AlN~gl~~s~g~~v~~~DaD~~~~~d~L~~l~~---~f~~~~~v~~v~g~~ 169 (439)
T TIGR03111 122 -ALNAAIYNSIGKYIIHIDSDGKLHKDAIKNMVT---RFENNPDIHAMTGVI 169 (439)
T ss_pred -HHHHHHHHccCCEEEEECCCCCcChHHHHHHHH---HHHhCCCeEEEEeEE
Confidence 555555555689999999999999999865554 456789999888754
No 28
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=98.36 E-value=6.6e-06 Score=74.28 Aligned_cols=178 Identities=15% Similarity=0.181 Sum_probs=99.2
Q ss_pred Ccccch-HHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCcceEEeccCCCCCCCCCCchhHHHHHHHHH
Q 019888 1 MACNRA-NYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKLTYMQHLDFEPVHADNPGELTAYYKIARHY 79 (334)
Q Consensus 1 ia~NRp-~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hy 79 (334)
.+||+. +.|.+||+||.++ . ..|+|..||+.+.+..+.+. . ...++.+..+.| .|.+.. +
T Consensus 4 ~~yn~~~~~l~~~l~sl~~q-~-----~~iivvDn~s~~~~~~~~~~-~-~~~i~~i~~~~n-~G~~~a----------~ 64 (237)
T cd02526 4 VTYNPDLSKLKELLAALAEQ-V-----DKVVVVDNSSGNDIELRLRL-N-SEKIELIHLGEN-LGIAKA----------L 64 (237)
T ss_pred EEecCCHHHHHHHHHHHhcc-C-----CEEEEEeCCCCccHHHHhhc-c-CCcEEEEECCCc-eehHHh----------h
Confidence 379999 9999999999986 2 27888888887666555443 1 112222222333 233221 2
Q ss_pred HHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCCCC--CCCcc--ccCC-----------Cc
Q 019888 80 KWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSWND--NGQKQ--FVHD-----------PY 144 (334)
Q Consensus 80 k~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~nd--ng~~~--~~~~-----------~~ 144 (334)
+.|+..+-.. +++.++++++|..+.|+++.-+......+..++.+.+++.--. .+... .... ..
T Consensus 65 N~g~~~a~~~-~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (237)
T cd02526 65 NIGIKAALEN-GADYVLLFDQDSVPPPDMVEKLLAYKILSDKNSNIGAVGPRIIDRRTGENSPGVRKSGYKLRIQKEGEE 143 (237)
T ss_pred hHHHHHHHhC-CCCEEEEECCCCCcCHhHHHHHHHHHHhhccCCCeEEEeeeEEcCCCCeeccceeccCccceecccccC
Confidence 2244443321 4799999999999999999988533344567787776654211 11100 0000 00
Q ss_pred eeeecCCCCcccccccchhhhhhCCCCCch----hHHHHHhhhhhhcCCe-eEeeccccc
Q 019888 145 VLYRSDFFPGLGWMLTRTTWDELSPKWPKA----YWDDWLRLKENHKGRQ-FIRPEVCRT 199 (334)
Q Consensus 145 ~lyrs~~fp~~GW~~~r~~W~el~~~wp~~----~Wd~wlr~~~~rk~r~-cI~P~isrt 199 (334)
.....+...+-|.++.|+.++++.. |+.. ..|..+-....++|.. ...|.+--.
T Consensus 144 ~~~~~~~~~~~~~~~rr~~~~~~gg-fd~~~~~~~eD~d~~~r~~~~G~~~~~~~~~~v~ 202 (237)
T cd02526 144 GLKEVDFLITSGSLISLEALEKVGG-FDEDLFIDYVDTEWCLRARSKGYKIYVVPDAVLK 202 (237)
T ss_pred CceEeeeeeccceEEcHHHHHHhCC-CCHHHcCccchHHHHHHHHHcCCcEEEEcCeEEE
Confidence 1111223335567788888987653 3322 1133333334566644 445766443
No 29
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=98.34 E-value=3.2e-06 Score=75.50 Aligned_cols=111 Identities=13% Similarity=0.138 Sum_probs=74.7
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCC-cceEEeccCCCCCCCCCCchhHHHHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDK-LTYMQHLDFEPVHADNPGELTAYYKIARHYK 80 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~-~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk 80 (334)
+||++++|.++|++|.++.. ...++|+|..||+.+.+.++++++.. ...++....+.+ .|...
T Consensus 5 ~yn~~~~l~~~l~sl~~q~~--~~~~eiiiVDd~S~d~t~~~~~~~~~~~~~i~~~~~~~n-~G~~~------------- 68 (224)
T cd06442 5 TYNERENIPELIERLDAALK--GIDYEIIVVDDNSPDGTAEIVRELAKEYPRVRLIVRPGK-RGLGS------------- 68 (224)
T ss_pred ccchhhhHHHHHHHHHHhhc--CCCeEEEEEeCCCCCChHHHHHHHHHhCCceEEEecCCC-CChHH-------------
Confidence 79999999999999998774 25679999999998888888776632 112222222333 23211
Q ss_pred HHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCC
Q 019888 81 WALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSW 131 (334)
Q Consensus 81 ~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~ 131 (334)
|++..+..-..+.++++++|+.++|+++.-+.+.+ ..+++.+.+-+.+
T Consensus 69 -a~n~g~~~a~gd~i~~lD~D~~~~~~~l~~l~~~~--~~~~~~~v~g~~~ 116 (224)
T cd06442 69 -AYIEGFKAARGDVIVVMDADLSHPPEYIPELLEAQ--LEGGADLVIGSRY 116 (224)
T ss_pred -HHHHHHHHcCCCEEEEEECCCCCCHHHHHHHHHHH--hcCCCCEEEEeee
Confidence 33334433346899999999999999998776653 3455555544433
No 30
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=98.33 E-value=1.1e-05 Score=72.40 Aligned_cols=183 Identities=12% Similarity=0.082 Sum_probs=98.8
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCC---cceEEeccCCCCCCCCCCchhHHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDK---LTYMQHLDFEPVHADNPGELTAYYKIARH 78 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~---~~~i~~~~~~~~~~~~~~~~~~y~~ia~H 78 (334)
+||+.++|.+||+||.++..+ ..++|+|..||+...+.++++++.. ...++......+. +....+ +.
T Consensus 5 ~yn~~~~l~~~l~sl~~q~~~--~~~eiiVvDd~S~d~t~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~G~------~~- 74 (219)
T cd06913 5 VHNGEQWLDECLESVLQQDFE--GTLELSVFNDASTDKSAEIIEKWRKKLEDSGVIVLVGSHNS-PSPKGV------GY- 74 (219)
T ss_pred ecCcHHHHHHHHHHHHhCCCC--CCEEEEEEeCCCCccHHHHHHHHHHhCcccCeEEEEecccC-CCCccH------HH-
Confidence 799999999999999998753 4689999999998888888877531 0011111111110 111111 11
Q ss_pred HHHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCCCC---CCCccc---cCC--Cceee---
Q 019888 79 YKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSWND---NGQKQF---VHD--PYVLY--- 147 (334)
Q Consensus 79 yk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~nd---ng~~~~---~~~--~~~ly--- 147 (334)
|.+..+..-..+.+++|++|..+.|+.+.-+-. .+.+++..+..+.... ...... ... ...+.
T Consensus 75 ---a~N~g~~~a~gd~i~~lD~D~~~~~~~l~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (219)
T cd06913 75 ---AKNQAIAQSSGRYLCFLDSDDVMMPQRIRLQYE---AALQHPNSIIGCQVRRIPEDSTERYTRWINTLTREQLLTQV 148 (219)
T ss_pred ---HHHHHHHhcCCCEEEEECCCccCChhHHHHHHH---HHHhCCCcEEEEEEEecCcccchhhHHHHHhcCHHHHHHHH
Confidence 334444433589999999999999998865433 3333444332333221 111100 000 00010
Q ss_pred ec---CCCCcccccccchhhhhhCC---CCC--chhHHHHHhhhhhhcCCee-Eeecccccccc
Q 019888 148 RS---DFFPGLGWMLTRTTWDELSP---KWP--KAYWDDWLRLKENHKGRQF-IRPEVCRTYNF 202 (334)
Q Consensus 148 rs---~~fp~~GW~~~r~~W~el~~---~wp--~~~Wd~wlr~~~~rk~r~c-I~P~isrt~n~ 202 (334)
.+ ...+.-+|+..|+.|+++.. ... ...|+-|+|. ..+|..+ ..|+.--.+..
T Consensus 149 ~~~~~~~~~~~~~~~rr~~~~~~g~f~~~~~~~~eD~~l~~r~--~~~g~~i~~~~~~~~~yr~ 210 (219)
T cd06913 149 YTSHGPTVIMPTWFCSREWFSHVGPFDEGGKGVPEDLLFFYEH--LRKGGGVYRVDRCLLLYRY 210 (219)
T ss_pred HhhcCCccccccceeehhHHhhcCCccchhccchhHHHHHHHH--HHcCCceEEEcceeeeeee
Confidence 00 01123357889999987543 221 1366777774 3455433 34664444433
No 31
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=98.29 E-value=5.4e-06 Score=71.72 Aligned_cols=116 Identities=11% Similarity=0.143 Sum_probs=77.3
Q ss_pred CcccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCC-cceEEeccCCCCCCCCCCchhHHHHHHHHH
Q 019888 1 MACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDK-LTYMQHLDFEPVHADNPGELTAYYKIARHY 79 (334)
Q Consensus 1 ia~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~-~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hy 79 (334)
.+||+++++.+||++|.++... ...++|+|..||+...+.++++.+.. +..++....+.+ .|.+ .-.
T Consensus 4 ~~~n~~~~l~~~l~sl~~~~~~-~~~~eiivvd~~s~d~~~~~~~~~~~~~~~~~~~~~~~n-~G~~----------~a~ 71 (185)
T cd04179 4 PAYNEEENIPELVERLLAVLEE-GYDYEIIVVDDGSTDGTAEIARELAARVPRVRVIRLSRN-FGKG----------AAV 71 (185)
T ss_pred cccChHhhHHHHHHHHHHHhcc-CCCEEEEEEcCCCCCChHHHHHHHHHhCCCeEEEEccCC-CCcc----------HHH
Confidence 3799999999999999998742 35679999999998888888877542 222222222333 2332 222
Q ss_pred HHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCCCCC
Q 019888 80 KWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSWNDN 134 (334)
Q Consensus 80 k~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~ndn 134 (334)
+.|+.... .+.++++++|..++|++++-+...+ ...+..+.+......+
T Consensus 72 n~g~~~a~----gd~i~~lD~D~~~~~~~l~~l~~~~--~~~~~~~v~g~~~~~~ 120 (185)
T cd04179 72 RAGFKAAR----GDIVVTMDADLQHPPEDIPKLLEKL--LEGGADVVIGSRFVRG 120 (185)
T ss_pred HHHHHHhc----CCEEEEEeCCCCCCHHHHHHHHHHH--hccCCcEEEEEeecCC
Confidence 23444443 6899999999999999987666642 3455555554444333
No 32
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=98.22 E-value=3.4e-05 Score=68.69 Aligned_cols=165 Identities=16% Similarity=0.172 Sum_probs=93.9
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCcceEEeccCCCCCCCCCCchhHHHHHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKLTYMQHLDFEPVHADNPGELTAYYKIARHYKW 81 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk~ 81 (334)
+||+++.+.++|+||+++.. ..++|+|..||+..++.+++++.. +..+. .+ .|.. .-.+.
T Consensus 7 ~~n~~~~l~~~l~sl~~q~~---~~~evivvdd~s~d~~~~~~~~~~-~~~~~-----~~-~g~~----------~a~n~ 66 (221)
T cd02522 7 TLNEAENLPRLLASLRRLNP---LPLEIIVVDGGSTDGTVAIARSAG-VVVIS-----SP-KGRA----------RQMNA 66 (221)
T ss_pred ccCcHHHHHHHHHHHHhccC---CCcEEEEEeCCCCccHHHHHhcCC-eEEEe-----CC-cCHH----------HHHHH
Confidence 68999999999999998764 567899999999888888887732 22211 11 1221 11122
Q ss_pred HHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCCCCCCCcccc-----CC-CceeeecCCCCcc
Q 019888 82 ALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSWNDNGQKQFV-----HD-PYVLYRSDFFPGL 155 (334)
Q Consensus 82 al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~ndng~~~~~-----~~-~~~lyrs~~fp~~ 155 (334)
|+.. ...+.++++++|+.+.|++++-+ +.....+..+.+............. .. .........+.+-
T Consensus 67 g~~~----a~~~~i~~~D~D~~~~~~~l~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (221)
T cd02522 67 GAAA----ARGDWLLFLHADTRLPPDWDAAI---IETLRADGAVAGAFRLRFDDPGPRLRLLELGANLRSRLFGLPYGDQ 139 (221)
T ss_pred HHHh----ccCCEEEEEcCCCCCChhHHHHH---HHHhhcCCcEEEEEEeeecCCccchhhhhhcccceecccCCCcCCc
Confidence 4433 34799999999999999998876 3333444444333322221111000 00 0011111123344
Q ss_pred cccccchhhhhhCCCCCc----hhHHHHHhhhhhhcCCeeEeecc
Q 019888 156 GWMLTRTTWDELSPKWPK----AYWDDWLRLKENHKGRQFIRPEV 196 (334)
Q Consensus 156 GW~~~r~~W~el~~~wp~----~~Wd~wlr~~~~rk~r~cI~P~i 196 (334)
|.++.|+.|+++.. |++ ..+|-++| ..+.|.....|..
T Consensus 140 ~~~~r~~~~~~~G~-fd~~~~~ED~d~~~r--~~~~G~~~~~~~~ 181 (221)
T cd02522 140 GLFIRRELFEELGG-FPELPLMEDVELVRR--LRRRGRPALLPSP 181 (221)
T ss_pred eEEEEHHHHHHhCC-CCccccccHHHHHHH--HHhCCCEEEcCce
Confidence 77888889987653 322 23444444 4556665554543
No 33
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=98.20 E-value=1.3e-05 Score=70.99 Aligned_cols=110 Identities=12% Similarity=0.189 Sum_probs=72.5
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHh-hCC--CcceEEeccCCCCCCCCCCchhHHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKAL-SYD--KLTYMQHLDFEPVHADNPGELTAYYKIARH 78 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~-~~~--~~~~i~~~~~~~~~~~~~~~~~~y~~ia~H 78 (334)
+||..++|.+||+||.++. ..++|+|..||+.+.+.++++ ... .+..+++.....+ .|.. .-
T Consensus 5 ~~Ne~~~l~~~l~sl~~~~----~~~eIivvdd~S~D~t~~~~~~~~~~~~v~~i~~~~~~~~-~Gk~----------~a 69 (191)
T cd06436 5 CLNEEAVIQRTLASLLRNK----PNFLVLVIDDASDDDTAGIVRLAITDSRVHLLRRHLPNAR-TGKG----------DA 69 (191)
T ss_pred ccccHHHHHHHHHHHHhCC----CCeEEEEEECCCCcCHHHHHhheecCCcEEEEeccCCcCC-CCHH----------HH
Confidence 7999999999999999876 346899999999999999887 221 2333332111111 1221 11
Q ss_pred HHHHHHHHhhhc-------CccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeC
Q 019888 79 YKWALDNLFYKH-------NFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSS 130 (334)
Q Consensus 79 yk~al~~vF~~~-------~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa 130 (334)
.++|+..+-... ..+.+++++.|..+.|+++..+...+ .+|.+.+|.+
T Consensus 70 ln~g~~~~~~~~~~~g~~~~~d~v~~~DaD~~~~~~~l~~~~~~~----~~~~v~~v~~ 124 (191)
T cd06436 70 LNAAYDQIRQILIEEGADPERVIIAVIDADGRLDPNALEAVAPYF----SDPRVAGTQS 124 (191)
T ss_pred HHHHHHHHhhhccccccCCCccEEEEECCCCCcCHhHHHHHHHhh----cCCceEEEee
Confidence 222444443210 13689999999999999998866543 4788876654
No 34
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=98.20 E-value=1.5e-06 Score=78.13 Aligned_cols=174 Identities=21% Similarity=0.263 Sum_probs=86.8
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHH----hhCCCcceEEeccCCCCCCCCCCchhHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKA----LSYDKLTYMQHLDFEPVHADNPGELTAYYKIAR 77 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi----~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~ 77 (334)
+||+++.+.++|+||+++.. .+++|+|..|++.+++.+.+ ..+.. ..++.+..+.+. + -...++
T Consensus 9 ~~~~~~~l~~~l~sl~~~~~---~~~~v~vvd~~~~~~~~~~~~~~~~~~~~-~~v~vi~~~~~~-g-------~~~k~~ 76 (228)
T PF13641_consen 9 AYNEDDVLRRCLESLLAQDY---PRLEVVVVDDGSDDETAEILRALAARYPR-VRVRVIRRPRNP-G-------PGGKAR 76 (228)
T ss_dssp BSS-HHHHHHHHHHHTTSHH---HTEEEEEEEE-SSS-GCTTHHHHHHTTGG--GEEEEE----H-H-------HHHHHH
T ss_pred ecCCHHHHHHHHHHHHcCCC---CCeEEEEEECCCChHHHHHHHHHHHHcCC-CceEEeecCCCC-C-------cchHHH
Confidence 68999999999999998764 45899999998876654444 44432 122222111110 1 012344
Q ss_pred HHHHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCCCC--CCCcc--ccCC-----------
Q 019888 78 HYKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSWND--NGQKQ--FVHD----------- 142 (334)
Q Consensus 78 Hyk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~nd--ng~~~--~~~~----------- 142 (334)
+.+.|+..+ .++.+++++||+.+.|+++.-+.+.+ .++.+.+|++... ++... ...+
T Consensus 77 a~n~~~~~~----~~d~i~~lD~D~~~~p~~l~~~~~~~----~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (228)
T PF13641_consen 77 ALNEALAAA----RGDYILFLDDDTVLDPDWLERLLAAF----ADPGVGAVGGPVFPDNDRNWLTRLQDLFFARWHLRFR 148 (228)
T ss_dssp HHHHHHHH-------SEEEEE-SSEEE-CHHHHHHHHHH----HBSS--EEEEEEEETTCCCEEEE-TT--S-EETTTS-
T ss_pred HHHHHHHhc----CCCEEEEECCCcEECHHHHHHHHHHH----HhCCCCeEeeeEeecCCCCHHHHHHHHHHhhhhhhhh
Confidence 445555554 48999999999999999987766655 6778877775431 22110 0000
Q ss_pred -CceeeecCCCCcccccccchhhhhhCCCCCc-hhHHH-HHhhhhhhcCCeeEe-ecc
Q 019888 143 -PYVLYRSDFFPGLGWMLTRTTWDELSPKWPK-AYWDD-WLRLKENHKGRQFIR-PEV 196 (334)
Q Consensus 143 -~~~lyrs~~fp~~GW~~~r~~W~el~~~wp~-~~Wd~-wlr~~~~rk~r~cI~-P~i 196 (334)
........+..|-+.++.|+.++++.. |+. ...+| .+-.....+|..+.+ |+.
T Consensus 149 ~~~~~~~~~~~~G~~~~~rr~~~~~~g~-fd~~~~~eD~~l~~r~~~~G~~~~~~~~~ 205 (228)
T PF13641_consen 149 SGRRALGVAFLSGSGMLFRRSALEEVGG-FDPFILGEDFDLCLRLRAAGWRIVYAPDA 205 (228)
T ss_dssp TT-B----S-B--TEEEEEHHHHHHH-S---SSSSSHHHHHHHHHHHTT--EEEEEEE
T ss_pred hhhcccceeeccCcEEEEEHHHHHHhCC-CCCCCcccHHHHHHHHHHCCCcEEEECCc
Confidence 001112223456777888888887642 221 11122 222234456765554 543
No 35
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=98.19 E-value=1.5e-05 Score=72.29 Aligned_cols=110 Identities=18% Similarity=0.118 Sum_probs=71.8
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCC----C-cceEEeccCCCCCCCCCCchhHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYD----K-LTYMQHLDFEPVHADNPGELTAYYKIA 76 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~----~-~~~i~~~~~~~~~~~~~~~~~~y~~ia 76 (334)
+||..+.+.++|+||.++..+ .+.+.|+|..| +.+.+.++++.+. . -..++++....+. |.. +
T Consensus 9 ~yNe~~~l~~~L~sl~~q~~~-~~~~eIiVvD~-s~D~t~~~~~~~~~~~~~~~~~i~~~~~~~~~-G~k---------~ 76 (232)
T cd06437 9 VFNEKYVVERLIEAACALDYP-KDRLEIQVLDD-STDETVRLAREIVEEYAAQGVNIKHVRRADRT-GYK---------A 76 (232)
T ss_pred cCCcHHHHHHHHHHHHhcCCC-ccceEEEEEEC-CCCcHHHHHHHHHHHHhhcCCceEEEECCCCC-CCc---------h
Confidence 799999999999999988764 45677888766 6555665555431 0 0123333222221 210 1
Q ss_pred HHHHHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCC
Q 019888 77 RHYKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSW 131 (334)
Q Consensus 77 ~Hyk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~ 131 (334)
. |++..++..+++.+++++.|+.+.|++++-+... ..++.+.+|++.
T Consensus 77 ~----a~n~g~~~a~~~~i~~~DaD~~~~~~~l~~~~~~----~~~~~v~~v~~~ 123 (232)
T cd06437 77 G----ALAEGMKVAKGEYVAIFDADFVPPPDFLQKTPPY----FADPKLGFVQTR 123 (232)
T ss_pred H----HHHHHHHhCCCCEEEEEcCCCCCChHHHHHhhhh----hcCCCeEEEecc
Confidence 1 3444444435899999999999999998875543 357889998873
No 36
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=98.19 E-value=1.2e-05 Score=70.52 Aligned_cols=101 Identities=15% Similarity=0.193 Sum_probs=70.5
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCcceEEeccCCCCCCCCCCchhHHHHHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKLTYMQHLDFEPVHADNPGELTAYYKIARHYKW 81 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk~ 81 (334)
+||.++.+.+||++|.++.++ ...++|+|..||+..+|.++++.+.. . +.......+ .|. +.-.++
T Consensus 5 ~~ne~~~i~~~l~sl~~~~~p-~~~~eiivvdd~s~D~t~~~~~~~~~-~-~~~~~~~~~-~gk----------~~aln~ 70 (183)
T cd06438 5 AHNEEAVIGNTVRSLKAQDYP-RELYRIFVVADNCTDDTAQVARAAGA-T-VLERHDPER-RGK----------GYALDF 70 (183)
T ss_pred ccchHHHHHHHHHHHHhcCCC-CcccEEEEEeCCCCchHHHHHHHcCC-e-EEEeCCCCC-CCH----------HHHHHH
Confidence 799999999999999998763 35678999999999999999988753 2 211111111 121 111223
Q ss_pred HHHHHhh-hcCccEEEEEccCceeChhHHHHHHHHH
Q 019888 82 ALDNLFY-KHNFSRVIILEDDMEIAPDFFDYFEAAA 116 (334)
Q Consensus 82 al~~vF~-~~~~~~vIiLEDDl~~sPdFf~y~~~~l 116 (334)
|+..+-. .-+++.+++++.|+.+.|+++.-+.+.+
T Consensus 71 g~~~a~~~~~~~d~v~~~DaD~~~~p~~l~~l~~~~ 106 (183)
T cd06438 71 GFRHLLNLADDPDAVVVFDADNLVDPNALEELNARF 106 (183)
T ss_pred HHHHHHhcCCCCCEEEEEcCCCCCChhHHHHHHHHH
Confidence 4444421 1138999999999999999998887765
No 37
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=98.17 E-value=8.1e-06 Score=82.31 Aligned_cols=109 Identities=13% Similarity=0.074 Sum_probs=77.8
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCC-cceEEeccCCCCCCCCCCchhHHHHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDK-LTYMQHLDFEPVHADNPGELTAYYKIARHYK 80 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~-~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk 80 (334)
+||.++.+.+||++++++.++ .++|+|..||+.+++.++++++.. ...++....+.|. |++ .
T Consensus 83 ~yNE~~~i~~~l~sll~q~yp---~~eIivVdDgs~D~t~~~~~~~~~~~~~v~vv~~~~n~-Gka----------~--- 145 (444)
T PRK14583 83 CFNEGLNARETIHAALAQTYT---NIEVIAINDGSSDDTAQVLDALLAEDPRLRVIHLAHNQ-GKA----------I--- 145 (444)
T ss_pred eCCCHHHHHHHHHHHHcCCCC---CeEEEEEECCCCccHHHHHHHHHHhCCCEEEEEeCCCC-CHH----------H---
Confidence 799999999999999998764 479999999998888877765421 1122222222322 221 1
Q ss_pred HHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCC
Q 019888 81 WALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSW 131 (334)
Q Consensus 81 ~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~ 131 (334)
|++.....-++|.++++|.|+.+.||++..+.+. +.+|+++.+|++-
T Consensus 146 -AlN~gl~~a~~d~iv~lDAD~~~~~d~L~~lv~~---~~~~~~~g~v~g~ 192 (444)
T PRK14583 146 -ALRMGAAAARSEYLVCIDGDALLDKNAVPYLVAP---LIANPRTGAVTGN 192 (444)
T ss_pred -HHHHHHHhCCCCEEEEECCCCCcCHHHHHHHHHH---HHhCCCeEEEEcc
Confidence 4444444335899999999999999999887664 3568999999874
No 38
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=98.16 E-value=1.3e-05 Score=86.65 Aligned_cols=167 Identities=17% Similarity=0.226 Sum_probs=108.9
Q ss_pred cccch-HHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCcceEEeccCCCCCCCCCCchhHHHHHHHHHH
Q 019888 2 ACNRA-NYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKLTYMQHLDFEPVHADNPGELTAYYKIARHYK 80 (334)
Q Consensus 2 a~NRp-~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk 80 (334)
|||.+ +.+++++.++++..++ .++++|+|.+||+.+++++++++.+ +..+..+ .|..++++
T Consensus 268 tYNE~~~vv~~tI~a~l~~dYP-~~k~EViVVDDgS~D~t~~la~~~~-v~yI~R~---~n~~gKAG------------- 329 (852)
T PRK11498 268 TYNEDLNVVKNTIYASLGIDWP-KDKLNIWILDDGGREEFRQFAQEVG-VKYIARP---THEHAKAG------------- 329 (852)
T ss_pred cCCCcHHHHHHHHHHHHhccCC-CCceEEEEEeCCCChHHHHHHHHCC-cEEEEeC---CCCcchHH-------------
Confidence 79998 5678999999998886 6789999999999999999999874 5555432 22212222
Q ss_pred HHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCC----CCCCCc-------cccCCCce----
Q 019888 81 WALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSW----NDNGQK-------QFVHDPYV---- 145 (334)
Q Consensus 81 ~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~----ndng~~-------~~~~~~~~---- 145 (334)
+++..+..-+.|.+++++-|.++.|||+. .+...+.+||+|..|.+- |..... ...+....
T Consensus 330 -nLN~aL~~a~GEyIavlDAD~ip~pdfL~---~~V~~f~~dP~VglVQtp~~f~n~dp~~rnl~~~~~~~~e~~~fy~~ 405 (852)
T PRK11498 330 -NINNALKYAKGEFVAIFDCDHVPTRSFLQ---MTMGWFLKDKKLAMMQTPHHFFSPDPFERNLGRFRKTPNEGTLFYGL 405 (852)
T ss_pred -HHHHHHHhCCCCEEEEECCCCCCChHHHH---HHHHHHHhCCCeEEEEcceeccCCchHHHhhHHHhhcccchhHHHHH
Confidence 34444443458999999999999999986 444555679999999863 221100 00011111
Q ss_pred ------eeecCCCCcccccccchhhhhhCCCCCc----hhHHHHHhhhhhhcCCeeEe
Q 019888 146 ------LYRSDFFPGLGWMLTRTTWDELSPKWPK----AYWDDWLRLKENHKGRQFIR 193 (334)
Q Consensus 146 ------lyrs~~fp~~GW~~~r~~W~el~~~wp~----~~Wd~wlr~~~~rk~r~cI~ 193 (334)
.+...++.|=+-++.|+.++++.. |+. ..+|-++|. .++|..+++
T Consensus 406 iq~g~~~~~a~~~~Gs~aviRReaLeeVGG-fd~~titED~dlslRL--~~~Gyrv~y 460 (852)
T PRK11498 406 VQDGNDMWDATFFCGSCAVIRRKPLDEIGG-IAVETVTEDAHTSLRL--HRRGYTSAY 460 (852)
T ss_pred HHhHHHhhcccccccceeeeEHHHHHHhcC-CCCCccCccHHHHHHH--HHcCCEEEE
Confidence 112234566666788889988653 332 355666663 456665554
No 39
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=98.15 E-value=2.2e-05 Score=71.02 Aligned_cols=108 Identities=12% Similarity=0.304 Sum_probs=69.7
Q ss_pred cccch-HHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHH-----HHHhhCCCcceEEeccCCCCCCCCCCchhHHHHH
Q 019888 2 ACNRA-NYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVK-----SKALSYDKLTYMQHLDFEPVHADNPGELTAYYKI 75 (334)
Q Consensus 2 a~NRp-~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr-----~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~i 75 (334)
+||.+ ++|+++|+||+++.+ ..++|+|..||+.+.+. ++.+..+. .+.....+.+. |.. .+
T Consensus 6 ~~ne~~~~l~~~l~sl~~q~~---~~~eiiVvdd~s~D~t~~~~i~~~~~~~~~--~i~~i~~~~~~-G~~---~~---- 72 (236)
T cd06435 6 CYEEPPEMVKETLDSLAALDY---PNFEVIVIDNNTKDEALWKPVEAHCAQLGE--RFRFFHVEPLP-GAK---AG---- 72 (236)
T ss_pred eCCCcHHHHHHHHHHHHhCCC---CCcEEEEEeCCCCchhHHHHHHHHHHHhCC--cEEEEEcCCCC-CCc---hH----
Confidence 68985 899999999998875 34789999999865542 44444331 22222222322 320 11
Q ss_pred HHHHHHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeC
Q 019888 76 ARHYKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSS 130 (334)
Q Consensus 76 a~Hyk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa 130 (334)
-.+.|+..+-. ++|.++++++|+.++|+++..+... ++ ++.+.+|++
T Consensus 73 --a~n~g~~~a~~--~~d~i~~lD~D~~~~~~~l~~l~~~---~~-~~~~~~v~~ 119 (236)
T cd06435 73 --ALNYALERTAP--DAEIIAVIDADYQVEPDWLKRLVPI---FD-DPRVGFVQA 119 (236)
T ss_pred --HHHHHHHhcCC--CCCEEEEEcCCCCcCHHHHHHHHHH---hc-CCCeeEEec
Confidence 12234444322 2799999999999999999877654 33 578888876
No 40
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=98.12 E-value=1.7e-05 Score=78.14 Aligned_cols=111 Identities=11% Similarity=0.122 Sum_probs=75.5
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCC---cceEEeccCCCCCCCCCCchhHHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDK---LTYMQHLDFEPVHADNPGELTAYYKIARH 78 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~---~~~i~~~~~~~~~~~~~~~~~~y~~ia~H 78 (334)
+||..+.+.+||+||.++.++ .++|+|..|++.+.+.++++.+.. -..++.+..+.+ .|..++.
T Consensus 49 ~~nee~~l~~~L~Sl~~q~Yp---~~EIivvdd~s~D~t~~iv~~~~~~~p~~~i~~v~~~~~-~G~~~K~--------- 115 (373)
T TIGR03472 49 LHGDEPELYENLASFCRQDYP---GFQMLFGVQDPDDPALAVVRRLRADFPDADIDLVIDARR-HGPNRKV--------- 115 (373)
T ss_pred CCCCChhHHHHHHHHHhcCCC---CeEEEEEeCCCCCcHHHHHHHHHHhCCCCceEEEECCCC-CCCChHH---------
Confidence 689999999999999999874 389999889887777777655421 112332222222 2322221
Q ss_pred HHHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCC
Q 019888 79 YKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSW 131 (334)
Q Consensus 79 yk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~ 131 (334)
+++.+....-++|.++++++|+.++||+++-+.+. + .|+.+.+|++.
T Consensus 116 --~~l~~~~~~a~ge~i~~~DaD~~~~p~~L~~lv~~---~-~~~~v~~V~~~ 162 (373)
T TIGR03472 116 --SNLINMLPHARHDILVIADSDISVGPDYLRQVVAP---L-ADPDVGLVTCL 162 (373)
T ss_pred --HHHHHHHHhccCCEEEEECCCCCcChhHHHHHHHH---h-cCCCcceEecc
Confidence 13444444445899999999999999999766554 3 47889888874
No 41
>PRK10073 putative glycosyl transferase; Provisional
Probab=98.09 E-value=2.1e-05 Score=76.47 Aligned_cols=104 Identities=14% Similarity=0.148 Sum_probs=71.7
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCC-cceEEeccCCCCCCCCCCchhHHHHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDK-LTYMQHLDFEPVHADNPGELTAYYKIARHYK 80 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~-~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk 80 (334)
+||++++|.+||+||+++.. ..++|+|..||+.+.+.++++.+.. ...++.+. .+| .|. +.-.+
T Consensus 14 ~yN~~~~L~~~l~Sl~~Qt~---~~~EIIiVdDgStD~t~~i~~~~~~~~~~i~vi~-~~n-~G~----------~~arN 78 (328)
T PRK10073 14 LYNAGKDFRAFMESLIAQTW---TALEIIIVNDGSTDNSVEIAKHYAENYPHVRLLH-QAN-AGV----------SVARN 78 (328)
T ss_pred ccCCHHHHHHHHHHHHhCCC---CCeEEEEEeCCCCccHHHHHHHHHhhCCCEEEEE-CCC-CCh----------HHHHH
Confidence 69999999999999999874 4679999999999888888877632 22233322 223 232 22123
Q ss_pred HHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEE
Q 019888 81 WALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIM 126 (334)
Q Consensus 81 ~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~ 126 (334)
.|+..+ ..++++++++|..+.|++++-+.+.+. +.+..+.
T Consensus 79 ~gl~~a----~g~yi~flD~DD~~~p~~l~~l~~~~~--~~~~dvv 118 (328)
T PRK10073 79 TGLAVA----TGKYVAFPDADDVVYPTMYETLMTMAL--EDDLDVA 118 (328)
T ss_pred HHHHhC----CCCEEEEECCCCccChhHHHHHHHHHH--hCCCCEE
Confidence 344433 479999999999999999876665432 2344554
No 42
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=98.09 E-value=2e-05 Score=68.51 Aligned_cols=107 Identities=13% Similarity=0.135 Sum_probs=72.1
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCC-cceEEeccCCCCCCCCCCchhHHHHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDK-LTYMQHLDFEPVHADNPGELTAYYKIARHYK 80 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~-~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk 80 (334)
+||+++.+.++|++|.++.......++|+|..||+.+++.++++.+.. ...++.+..+.| .|.. +
T Consensus 5 ~~n~~~~l~~~l~sl~~~~~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~i~~i~~~~n-~G~~----------~--- 70 (181)
T cd04187 5 VYNEEENLPELYERLKAVLESLGYDYEIIFVDDGSTDRTLEILRELAARDPRVKVIRLSRN-FGQQ----------A--- 70 (181)
T ss_pred ecCchhhHHHHHHHHHHHHHhcCCCeEEEEEeCCCCccHHHHHHHHHhhCCCEEEEEecCC-CCcH----------H---
Confidence 799999999999999876531135679999999999888888877632 112222222333 2321 1
Q ss_pred HHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEE
Q 019888 81 WALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIM 126 (334)
Q Consensus 81 ~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~ 126 (334)
|++..+.....+.++++++|+.++|+++.-+-+. ++.+..+.
T Consensus 71 -a~n~g~~~a~~d~i~~~D~D~~~~~~~l~~l~~~---~~~~~~~v 112 (181)
T cd04187 71 -ALLAGLDHARGDAVITMDADLQDPPELIPEMLAK---WEEGYDVV 112 (181)
T ss_pred -HHHHHHHhcCCCEEEEEeCCCCCCHHHHHHHHHH---HhCCCcEE
Confidence 4444444444799999999999999988777664 45555543
No 43
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=97.98 E-value=3.4e-05 Score=76.32 Aligned_cols=102 Identities=17% Similarity=0.240 Sum_probs=70.3
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCC-c---ceEEeccCCCCCCCCCCchhHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDK-L---TYMQHLDFEPVHADNPGELTAYYKIAR 77 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~-~---~~i~~~~~~~~~~~~~~~~~~y~~ia~ 77 (334)
+||..+.+.+||+||.++.++ ..++|+|..||+.+.|.++++++.. . ..++....+++..|..+.
T Consensus 48 a~Ne~~~L~~~L~sL~~q~yp--~~~eIIVVDd~StD~T~~i~~~~~~~~~~~~~i~vi~~~~~~~g~~Gk--------- 116 (384)
T TIGR03469 48 ARNEADVIGECVTSLLEQDYP--GKLHVILVDDHSTDGTADIARAAARAYGRGDRLTVVSGQPLPPGWSGK--------- 116 (384)
T ss_pred cCCcHhHHHHHHHHHHhCCCC--CceEEEEEeCCCCCcHHHHHHHHHHhcCCCCcEEEecCCCCCCCCcch---------
Confidence 789999999999999998764 4589999999999888888876531 1 123333222211232221
Q ss_pred HHHHHHHHHhhhcC-----ccEEEEEccCceeChhHHHHHHHHH
Q 019888 78 HYKWALDNLFYKHN-----FSRVIILEDDMEIAPDFFDYFEAAA 116 (334)
Q Consensus 78 Hyk~al~~vF~~~~-----~~~vIiLEDDl~~sPdFf~y~~~~l 116 (334)
.+|+++....-. .|.++++++|+.+.|+++.-+-+.+
T Consensus 117 --~~A~n~g~~~A~~~~~~gd~llflDaD~~~~p~~l~~lv~~~ 158 (384)
T TIGR03469 117 --LWAVSQGIAAARTLAPPADYLLLTDADIAHGPDNLARLVARA 158 (384)
T ss_pred --HHHHHHHHHHHhccCCCCCEEEEECCCCCCChhHHHHHHHHH
Confidence 124555444433 7999999999999999987666554
No 44
>PRK10063 putative glycosyl transferase; Provisional
Probab=97.96 E-value=5.8e-05 Score=70.42 Aligned_cols=180 Identities=13% Similarity=0.127 Sum_probs=100.5
Q ss_pred CcccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCcceEEeccCCCCCCCCCCchhHHHHHHHHHH
Q 019888 1 MACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKLTYMQHLDFEPVHADNPGELTAYYKIARHYK 80 (334)
Q Consensus 1 ia~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk 80 (334)
.+||..+.|.+||+||.++.......++|+|..||+.+.+.++++++.....++.+. .++. |.. +
T Consensus 8 ~~yN~~~~l~~~l~sl~~~~~~~~~~~EiIVvDdgStD~t~~i~~~~~~~~~i~~i~-~~~~-G~~----~--------- 72 (248)
T PRK10063 8 VAFRNLEGIVKTHASLRHLAQDPGISFEWIVVDGGSNDGTREFLENLNGIFNLRFVS-EPDN-GIY----D--------- 72 (248)
T ss_pred EeCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEECcCcccHHHHHHHhcccCCEEEEE-CCCC-CHH----H---------
Confidence 379999999999999986421013568999999999999999999875311233222 2332 321 1
Q ss_pred HHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCCC-C--CCCccc-cCCC-ceeeecCCCCcc
Q 019888 81 WALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSWN-D--NGQKQF-VHDP-YVLYRSDFFPGL 155 (334)
Q Consensus 81 ~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~n-d--ng~~~~-~~~~-~~lyrs~~fp~~ 155 (334)
|++..+..-..+.+++|+.|....|+.++.+.++ ....+...+++++- + .|.... ...+ ..+++.-.+.+-
T Consensus 73 -A~N~Gi~~a~g~~v~~ld~DD~~~~~~~~~~~~~---~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (248)
T PRK10063 73 -AMNKGIAMAQGRFALFLNSGDIFHQDAANFVRQL---KMQKDNAMIIGDALLDFGDGHKIKRSAKPGWYIYHSLPASHQ 148 (248)
T ss_pred -HHHHHHHHcCCCEEEEEeCCcccCcCHHHHHHHH---HhCCCCeEEEeeeEEEcCCCcEEEEccCChhHHhcCCCCCCc
Confidence 4444444334899999997777788987766654 23445555555542 1 121110 0111 111111111122
Q ss_pred cccccchhhhh--hCCCCCc-hhHHHHHhhhhhhcCCeeE-eeccccccc
Q 019888 156 GWMLTRTTWDE--LSPKWPK-AYWDDWLRLKENHKGRQFI-RPEVCRTYN 201 (334)
Q Consensus 156 GW~~~r~~W~e--l~~~wp~-~~Wd~wlr~~~~rk~r~cI-~P~isrt~n 201 (334)
+-+..++.++. +++..+- ..|+-|+|. .++|.... .|+.--.+.
T Consensus 149 ~~~~~~~~~~~~~fd~~~~~~~Dydl~lrl--~~~g~~~~~v~~~l~~y~ 196 (248)
T PRK10063 149 AIFFPVSGLKKWRYDLQYKVSSDYALAARL--YKAGYAFKKLNGLVSEFS 196 (248)
T ss_pred EEEEEHHHHhcCCCCcccchHHhHHHHHHH--HHcCCcEEEcCceeEEEe
Confidence 33344555542 4444443 478888884 45654433 365543333
No 45
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=97.89 E-value=9.5e-05 Score=79.12 Aligned_cols=167 Identities=15% Similarity=0.227 Sum_probs=101.6
Q ss_pred cccchH-HHHHHHHHHHhcCCCCCCCccEEEEeCCCC------------------HHHHHHHhhCCCcceEEeccCCCCC
Q 019888 2 ACNRAN-YLERTINSVFKYQGSVASKYPLFVSQDGSN------------------PQVKSKALSYDKLTYMQHLDFEPVH 62 (334)
Q Consensus 2 a~NRp~-~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~------------------~evr~vi~~~~~~~~i~~~~~~~~~ 62 (334)
+||.+. .++++|+++++..++ +++++|+|..||+. ++++++++..+ +.++. ++.|.
T Consensus 139 ~yNE~~~iv~~tl~s~~~~dYP-~~~~eIiVvDDgStD~t~~~~~~~~~~~~~~~~~~~~l~~~~~-v~yi~---r~~n~ 213 (713)
T TIGR03030 139 TYNEDLEIVATTVLAAKNMDYP-ADKFRVWILDDGGTDQKRNDPDPEQAEAAQRREELKEFCRKLG-VNYIT---RPRNV 213 (713)
T ss_pred CCCCCHHHHHHHHHHHHhCCCC-ccceEEEEEECcCCccccccchhhhhhhhhhHHHHHHHHHHcC-cEEEE---CCCCC
Confidence 799975 557899999998875 67899999999963 34455555543 44444 33332
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCC----CCCCCcc
Q 019888 63 ADNPGELTAYYKIARHYKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSW----NDNGQKQ 138 (334)
Q Consensus 63 ~~~~~~~~~y~~ia~Hyk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~----ndng~~~ 138 (334)
.++++ +++...+..+.|.+++++.|..+.|||+. ++...+.+||++.+|.+- |......
T Consensus 214 ~~KAg--------------nLN~al~~a~gd~Il~lDAD~v~~pd~L~---~~v~~f~~dp~v~~Vqtp~~f~~p~~~~~ 276 (713)
T TIGR03030 214 HAKAG--------------NINNALKHTDGELILIFDADHVPTRDFLQ---RTVGWFVEDPKLFLVQTPHFFVSPDPIER 276 (713)
T ss_pred CCChH--------------HHHHHHHhcCCCEEEEECCCCCcChhHHH---HHHHHHHhCCCEEEEeCCeeccCCCHHhh
Confidence 22222 34444444458999999999999999985 455566789999988652 2111000
Q ss_pred c-------cCCCc----------eeeecCCCCcccccccchhhhhhCCCCC----chhHHHHHhhhhhhcCCeeEe
Q 019888 139 F-------VHDPY----------VLYRSDFFPGLGWMLTRTTWDELSPKWP----KAYWDDWLRLKENHKGRQFIR 193 (334)
Q Consensus 139 ~-------~~~~~----------~lyrs~~fp~~GW~~~r~~W~el~~~wp----~~~Wd~wlr~~~~rk~r~cI~ 193 (334)
. .+... ..+...++.|-+.++.|+.++++.. |+ ....+-++| ..++|..+++
T Consensus 277 nl~~~~~~~~e~~~f~~~i~~g~~~~~~~~~~Gs~~~iRR~al~~iGG-f~~~~vtED~~l~~r--L~~~G~~~~y 349 (713)
T TIGR03030 277 NLGTFRRMPNENELFYGLIQDGNDFWNAAFFCGSAAVLRREALDEIGG-IAGETVTEDAETALK--LHRRGWNSAY 349 (713)
T ss_pred hhHHHHHhhhHHHHHHHHHHHHHhhhCCeeecCceeEEEHHHHHHcCC-CCCCCcCcHHHHHHH--HHHcCCeEEE
Confidence 0 00000 1112234566677888999988653 22 224444454 3456665544
No 46
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=97.85 E-value=9.2e-05 Score=68.39 Aligned_cols=99 Identities=19% Similarity=0.205 Sum_probs=70.0
Q ss_pred cccch-HHHHHHHHHHHhcCCCC-------CCCccEEEEeCCCCHHHHHHHhhCCCcceEEeccCCCCCCCCCCchhHHH
Q 019888 2 ACNRA-NYLERTINSVFKYQGSV-------ASKYPLFVSQDGSNPQVKSKALSYDKLTYMQHLDFEPVHADNPGELTAYY 73 (334)
Q Consensus 2 a~NRp-~~l~r~L~sL~~~~~~~-------~~~~~l~Is~Dg~~~evr~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~ 73 (334)
+||-+ +++.++|+||+++.++. .++++|+|..||+.. .| .|...+.
T Consensus 5 ~yNE~~~~i~~~l~sv~~q~y~~~~~~~~~~~~~evivv~Dgs~d---------------------~~-~gk~~~~---- 58 (244)
T cd04190 5 MYNEDEEELARTLDSILKNDYPFCARGGDSWKKIVVCVIFDGAIK---------------------KN-RGKRDSQ---- 58 (244)
T ss_pred eecCCHHHHHHHHHHHHHhhHHHHhcCCCCccEEEEEEEeCCccc---------------------cc-CcchHHH----
Confidence 79995 89999999999999741 468999999999975 11 1221110
Q ss_pred HHHHHHHHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCCC
Q 019888 74 KIARHYKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSWN 132 (334)
Q Consensus 74 ~ia~Hyk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~n 132 (334)
.++-.++......-+.+.+++++.|..+.|+++..+.+. +..||++.+|+|..
T Consensus 59 ---~~~~~~~~~~~~~a~~e~i~~~DaD~~~~~~~l~~l~~~---~~~~p~vg~v~g~~ 111 (244)
T cd04190 59 ---LWFFNYFCRVLFPDDPEFILLVDADTKFDPDSIVQLYKA---MDKDPEIGGVCGEI 111 (244)
T ss_pred ---HHHHHHHHHHhhcCCCCEEEEECCCCcCCHhHHHHHHHH---HHhCCCEEEEEeee
Confidence 011123333332235899999999999999999876654 45689999998864
No 47
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=97.78 E-value=0.00012 Score=66.87 Aligned_cols=90 Identities=21% Similarity=0.217 Sum_probs=65.9
Q ss_pred CcccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCcceEEeccCCCCCCCCCCchhHHHHHHHHHH
Q 019888 1 MACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKLTYMQHLDFEPVHADNPGELTAYYKIARHYK 80 (334)
Q Consensus 1 ia~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk 80 (334)
.+||..+.|.+||+||..+. + +|+|..||+.+.|.++++.++ ..-+++ ++ .|. +.-.+
T Consensus 7 ~~~Ne~~~l~~~l~sl~~~~----~--eiivvD~gStD~t~~i~~~~~-~~v~~~----~~-~g~----------~~~~n 64 (229)
T cd02511 7 ITKNEERNIERCLESVKWAV----D--EIIVVDSGSTDRTVEIAKEYG-AKVYQR----WW-DGF----------GAQRN 64 (229)
T ss_pred EeCCcHHHHHHHHHHHhccc----C--EEEEEeCCCCccHHHHHHHcC-CEEEEC----CC-CCh----------HHHHH
Confidence 47999999999999998653 1 799999999999999999775 332222 21 121 22233
Q ss_pred HHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHH
Q 019888 81 WALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAA 116 (334)
Q Consensus 81 ~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l 116 (334)
+|++. ...+.+++|+.|..++|+++.-+.+.+
T Consensus 65 ~~~~~----a~~d~vl~lDaD~~~~~~~~~~l~~~~ 96 (229)
T cd02511 65 FALEL----ATNDWVLSLDADERLTPELADEILALL 96 (229)
T ss_pred HHHHh----CCCCEEEEEeCCcCcCHHHHHHHHHHH
Confidence 45544 347899999999999999998777654
No 48
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=97.76 E-value=0.0002 Score=63.89 Aligned_cols=99 Identities=17% Similarity=0.229 Sum_probs=69.3
Q ss_pred cccchHHHHHHHHHHHhcCCC-CCCCccEEEEeCCCCHHHHHHHhhCCC-c-ceEEeccCCCCCCCCCCchhHHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGS-VASKYPLFVSQDGSNPQVKSKALSYDK-L-TYMQHLDFEPVHADNPGELTAYYKIARH 78 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~-~~~~~~l~Is~Dg~~~evr~vi~~~~~-~-~~i~~~~~~~~~~~~~~~~~~y~~ia~H 78 (334)
+||..+++.+||++|+++... ....++|+|..||+...+.++++.+.. . ..++....+.| .|..+
T Consensus 5 ~yN~~~~l~~~l~~l~~~~~~~~~~~~eiivvdd~S~D~t~~~~~~~~~~~~~~i~~i~~~~n-~G~~~----------- 72 (211)
T cd04188 5 AYNEEKRLPPTLEEAVEYLEERPSFSYEIIVVDDGSKDGTAEVARKLARKNPALIRVLTLPKN-RGKGG----------- 72 (211)
T ss_pred ccChHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCCCCchHHHHHHHHHhCCCcEEEEEcccC-CCcHH-----------
Confidence 799999999999999987420 124679999999998888888877632 1 11233333333 23321
Q ss_pred HHHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHH
Q 019888 79 YKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAA 115 (334)
Q Consensus 79 yk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~ 115 (334)
|++..+..-..+.+++++.|..+.|+++.-+.+.
T Consensus 73 ---a~~~g~~~a~gd~i~~ld~D~~~~~~~l~~l~~~ 106 (211)
T cd04188 73 ---AVRAGMLAARGDYILFADADLATPFEELEKLEEA 106 (211)
T ss_pred ---HHHHHHHHhcCCEEEEEeCCCCCCHHHHHHHHHH
Confidence 4454554444799999999999999999776665
No 49
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=97.67 E-value=0.00024 Score=67.95 Aligned_cols=112 Identities=14% Similarity=0.161 Sum_probs=77.3
Q ss_pred CcccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhC--CCcceEEeccCCCCCCCCCCchhHHHHHHHH
Q 019888 1 MACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSY--DKLTYMQHLDFEPVHADNPGELTAYYKIARH 78 (334)
Q Consensus 1 ia~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~--~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~H 78 (334)
++|||++++..||++|.++.++ . ..+++.++|+...+.+.++.. .++..++ ...| .|-++...
T Consensus 10 v~yn~~~~l~~~l~~l~~~~~~--~-~~iv~vDn~s~d~~~~~~~~~~~~~v~~i~---~~~N-lG~agg~n-------- 74 (305)
T COG1216 10 VTYNRGEDLVECLASLAAQTYP--D-DVIVVVDNGSTDGSLEALKARFFPNVRLIE---NGEN-LGFAGGFN-------- 74 (305)
T ss_pred EecCCHHHHHHHHHHHhcCCCC--C-cEEEEccCCCCCCCHHHHHhhcCCcEEEEE---cCCC-ccchhhhh--------
Confidence 4799999999999999999864 2 234456778887888777763 3344443 3444 45544433
Q ss_pred HHHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCCCC
Q 019888 79 YKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSWND 133 (334)
Q Consensus 79 yk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~nd 133 (334)
.|+..++.. .++++++|-+|.++.||++. ++++..+.++.++++.+.-.
T Consensus 75 --~g~~~a~~~-~~~~~l~LN~D~~~~~~~l~---~ll~~~~~~~~~~~~~~~i~ 123 (305)
T COG1216 75 --RGIKYALAK-GDDYVLLLNPDTVVEPDLLE---ELLKAAEEDPAAGVVGPLIR 123 (305)
T ss_pred --HHHHHHhcC-CCcEEEEEcCCeeeChhHHH---HHHHHHHhCCCCeEeeeeEe
Confidence 266666653 23389999999999999984 55566677787777766533
No 50
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=97.63 E-value=0.00027 Score=64.88 Aligned_cols=98 Identities=14% Similarity=0.131 Sum_probs=67.4
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCC---cceEEeccCCCCCCCCCCchhHHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDK---LTYMQHLDFEPVHADNPGELTAYYKIARH 78 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~---~~~i~~~~~~~~~~~~~~~~~~y~~ia~H 78 (334)
+||..+.+..++++|.+.... ...++|+|..||+.+.|.++++++.. ...+.......| .|.. +
T Consensus 17 ~yne~~~l~~~l~~l~~~~~~-~~~~eiivvDdgS~D~t~~i~~~~~~~~~~~~v~~~~~~~n-~G~~----~------- 83 (243)
T PLN02726 17 TYNERLNIALIVYLIFKALQD-VKDFEIIVVDDGSPDGTQDVVKQLQKVYGEDRILLRPRPGK-LGLG----T------- 83 (243)
T ss_pred cCCchhhHHHHHHHHHHHhcc-CCCeEEEEEeCCCCCCHHHHHHHHHHhcCCCcEEEEecCCC-CCHH----H-------
Confidence 799999999999999875431 34789999999999889988877531 112322222222 1221 1
Q ss_pred HHHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHH
Q 019888 79 YKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAA 115 (334)
Q Consensus 79 yk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~ 115 (334)
|++..+..-..+.+++++.|+.+.|+++.-+-+.
T Consensus 84 ---a~n~g~~~a~g~~i~~lD~D~~~~~~~l~~l~~~ 117 (243)
T PLN02726 84 ---AYIHGLKHASGDFVVIMDADLSHHPKYLPSFIKK 117 (243)
T ss_pred ---HHHHHHHHcCCCEEEEEcCCCCCCHHHHHHHHHH
Confidence 4444444435799999999999999998765553
No 51
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=97.54 E-value=0.00048 Score=66.47 Aligned_cols=110 Identities=16% Similarity=0.171 Sum_probs=72.7
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCcceEEecc----CCCCCCCCCCchhHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKLTYMQHLD----FEPVHADNPGELTAYYKIAR 77 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~~~i~~~~----~~~~~~~~~~~~~~y~~ia~ 77 (334)
+||..+.+.+||++|.++... ....+|+|..||+.+.|.++++++.. ..+.+.. .+.| .|.. .
T Consensus 39 ayNee~~I~~~l~sl~~~~~~-~~~~EIIVVDDgStD~T~~ia~~~~~-~v~~~~~~~~~~~~n-~Gkg----~------ 105 (306)
T PRK13915 39 ALNEEETVGKVVDSIRPLLME-PLVDELIVIDSGSTDATAERAAAAGA-RVVSREEILPELPPR-PGKG----E------ 105 (306)
T ss_pred cCCcHHHHHHHHHHHHHHhcc-CCCcEEEEEeCCCccHHHHHHHHhcc-hhhcchhhhhccccC-CCHH----H------
Confidence 799999999999999986531 23468999999999999999988752 1111100 1121 1221 1
Q ss_pred HHHHHHHHHhhhcCccEEEEEccCce-eChhHHHHHHHHHHhhcCCCCEEEEeCC
Q 019888 78 HYKWALDNLFYKHNFSRVIILEDDME-IAPDFFDYFEAAADLLDKDKSIMAVSSW 131 (334)
Q Consensus 78 Hyk~al~~vF~~~~~~~vIiLEDDl~-~sPdFf~y~~~~l~~y~~D~~I~~ISa~ 131 (334)
|+...+..-..+.+++++.|+. +.|+++.=+. ..+..++.+-.|.|+
T Consensus 106 ----A~~~g~~~a~gd~vv~lDaD~~~~~p~~l~~l~---~~l~~~~~~~~V~g~ 153 (306)
T PRK13915 106 ----ALWRSLAATTGDIVVFVDADLINFDPMFVPGLL---GPLLTDPGVHLVKAF 153 (306)
T ss_pred ----HHHHHHHhcCCCEEEEEeCccccCCHHHHHHHH---HHHHhCCCceEEEEE
Confidence 3334444345899999999996 8999875444 344556777656554
No 52
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=97.50 E-value=0.001 Score=62.56 Aligned_cols=110 Identities=7% Similarity=0.139 Sum_probs=68.1
Q ss_pred cccchHH-HHHHHHHHHh----cCCCCCCCccEEEEeCCCCHHHH--------HHHhhCCCcceEEeccCCCCCCCCCCc
Q 019888 2 ACNRANY-LERTINSVFK----YQGSVASKYPLFVSQDGSNPQVK--------SKALSYDKLTYMQHLDFEPVHADNPGE 68 (334)
Q Consensus 2 a~NRp~~-l~r~L~sL~~----~~~~~~~~~~l~Is~Dg~~~evr--------~vi~~~~~~~~i~~~~~~~~~~~~~~~ 68 (334)
+||-+.. |..+|++..+ +.+ +.++.|+|.+|+.++++. ++++.+.....++...+..+. |..
T Consensus 7 ~~ne~~~~l~~~l~~~~~~~~~~~~--~~~~eI~vldD~~d~~~~~~~~~~~~~l~~~~~~~~~v~~~~r~~~~-g~K-- 81 (254)
T cd04191 7 VYNEDPARVFAGLRAMYESLAKTGL--ADHFDFFILSDTRDPDIWLAEEAAWLDLCEELGAQGRIYYRRRRENT-GRK-- 81 (254)
T ss_pred CCCCCHHHHHHHHHHHHHHHHhcCC--cCceEEEEECCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEcCCCC-Ccc--
Confidence 4666654 7788887765 332 256899999999976532 244444322223322233332 221
Q ss_pred hhHHHHHHHHHHHHHHHHhhh--cCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeC
Q 019888 69 LTAYYKIARHYKWALDNLFYK--HNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSS 130 (334)
Q Consensus 69 ~~~y~~ia~Hyk~al~~vF~~--~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa 130 (334)
.+ +|+..... -+++.+++++-|..+.|||+..+-. .+..||+|..|.+
T Consensus 82 -ag----------~l~~~~~~~~~~~~~i~~~DaD~~~~p~~l~~~v~---~~~~~~~vg~vq~ 131 (254)
T cd04191 82 -AG----------NIADFCRRWGSRYDYMVVLDADSLMSGDTIVRLVR---RMEANPRAGIIQT 131 (254)
T ss_pred -HH----------HHHHHHHHhCCCCCEEEEEeCCCCCCHHHHHHHHH---HHHhCCCEEEEeC
Confidence 11 33333332 2489999999999999999976555 4567999999974
No 53
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=97.35 E-value=0.0015 Score=69.80 Aligned_cols=110 Identities=10% Similarity=0.162 Sum_probs=71.3
Q ss_pred cccch-----HHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHH--------HHHhhCCCcceEEeccCCCCCCCCCCc
Q 019888 2 ACNRA-----NYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVK--------SKALSYDKLTYMQHLDFEPVHADNPGE 68 (334)
Q Consensus 2 a~NRp-----~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr--------~vi~~~~~~~~i~~~~~~~~~~~~~~~ 68 (334)
+||-+ +.++.+++||.++.+ .++++++|-+|+.++++. ++.+.+..-..+....+..|...++++
T Consensus 132 ~yNEd~~~v~~~L~a~~~Sl~~~~~--~~~~e~~vLdD~~d~~~~~~e~~~~~~L~~~~~~~~~i~yr~R~~n~~~KaGN 209 (691)
T PRK05454 132 IYNEDPARVFAGLRAMYESLAATGH--GAHFDFFILSDTRDPDIAAAEEAAWLELRAELGGEGRIFYRRRRRNVGRKAGN 209 (691)
T ss_pred CCCCChHHHHHHHHHHHHHHHhcCC--CCCEEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCcEEEEECCcCCCccHHH
Confidence 46765 358899999998764 368899999999977654 344444321122222233332122233
Q ss_pred hhHHHHHHHHHHHHHHHHhhh--cCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeC
Q 019888 69 LTAYYKIARHYKWALDNLFYK--HNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSS 130 (334)
Q Consensus 69 ~~~y~~ia~Hyk~al~~vF~~--~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa 130 (334)
|...+.. -+||++|++|-|..++|||+.-+-. .+++||++..|.+
T Consensus 210 --------------l~~~~~~~~~~~eyivvLDADs~m~~d~L~~lv~---~m~~dP~vGlVQt 256 (691)
T PRK05454 210 --------------IADFCRRWGGAYDYMVVLDADSLMSGDTLVRLVR---LMEANPRAGLIQT 256 (691)
T ss_pred --------------HHHHHHhcCCCcCEEEEEcCCCCCCHHHHHHHHH---HHhhCcCEEEEeC
Confidence 2223332 1489999999999999999866554 4567999999985
No 54
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=97.24 E-value=0.0012 Score=54.73 Aligned_cols=91 Identities=18% Similarity=0.191 Sum_probs=62.8
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCcc-eEEeccCCCCCCCCCCchhHHHHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKLT-YMQHLDFEPVHADNPGELTAYYKIARHYK 80 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~~-~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk 80 (334)
+||+++++.++|+|+.++... .++|+|..||+...+.++++.+.... .+.......| .|. +.
T Consensus 11 ~~n~~~~l~~~l~s~~~q~~~---~~eiivvddgs~d~t~~~~~~~~~~~~~~~~~~~~~~-~g~----------~~--- 73 (291)
T COG0463 11 TYNEEEYLPEALESLLNQTYK---DFEIIVVDDGSTDGTTEIAIEYGAKDVRVIRLINERN-GGL----------GA--- 73 (291)
T ss_pred ccchhhhHHHHHHHHHhhhhc---ceEEEEEeCCCCCChHHHHHHHhhhcceEEEeecccC-CCh----------HH---
Confidence 799999999999999999853 26799999999999999888875321 1222211222 122 11
Q ss_pred HHHHHHhhhcCccEEEEEccCceeChhHHHH
Q 019888 81 WALDNLFYKHNFSRVIILEDDMEIAPDFFDY 111 (334)
Q Consensus 81 ~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y 111 (334)
|.+..+.....+.+.+++.|.. .|+-+..
T Consensus 74 -~~~~~~~~~~~~~~~~~d~d~~-~~~~~~~ 102 (291)
T COG0463 74 -ARNAGLEYARGDYIVFLDADDQ-HPPELIP 102 (291)
T ss_pred -HHHhhHHhccCCEEEEEccCCC-CCHHHHH
Confidence 3344443333589999999999 7777776
No 55
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=97.06 E-value=0.0042 Score=61.43 Aligned_cols=108 Identities=21% Similarity=0.248 Sum_probs=74.4
Q ss_pred cccchH-HHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCC-c-ceEEeccCCCCCCCCCCchhHHHHHHHH
Q 019888 2 ACNRAN-YLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDK-L-TYMQHLDFEPVHADNPGELTAYYKIARH 78 (334)
Q Consensus 2 a~NRp~-~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~-~-~~i~~~~~~~~~~~~~~~~~~y~~ia~H 78 (334)
+||-+. .++++++++.++.++ .++|+|..|++.+++.+++++... . ..++....+..+.|+++
T Consensus 62 ~ynE~~~~~~~~l~s~~~~dyp---~~evivv~d~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gK~~----------- 127 (439)
T COG1215 62 AYNEEPEVLEETLESLLSQDYP---RYEVIVVDDGSTDETYEILEELGAEYGPNFRVIYPEKKNGGKAG----------- 127 (439)
T ss_pred cCCCchhhHHHHHHHHHhCCCC---CceEEEECCCCChhHHHHHHHHHhhcCcceEEEeccccCccchH-----------
Confidence 567777 999999999999975 378999999999999999887652 1 12222211011112211
Q ss_pred HHHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEe
Q 019888 79 YKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVS 129 (334)
Q Consensus 79 yk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~IS 129 (334)
|++..+....+|.|+++|-|-.+.|||+..+-. .+++++.+.+++
T Consensus 128 ---al~~~l~~~~~d~V~~~DaD~~~~~d~l~~~~~---~f~~~~~~~v~~ 172 (439)
T COG1215 128 ---ALNNGLKRAKGDVVVILDADTVPEPDALRELVS---PFEDPPVGAVVG 172 (439)
T ss_pred ---HHHHHHhhcCCCEEEEEcCCCCCChhHHHHHHh---hhcCCCeeEEeC
Confidence 566666655689999999999999999976655 445555553333
No 56
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=97.05 E-value=0.0021 Score=62.41 Aligned_cols=100 Identities=16% Similarity=0.160 Sum_probs=67.3
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCC--cceEEeccCCCCCCCCCCchhHHHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDK--LTYMQHLDFEPVHADNPGELTAYYKIARHY 79 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~--~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hy 79 (334)
+||..+.+.+++++|.+........++|+|..||+.+.+.+++++... -..+.....+.| .|...
T Consensus 14 ~yNE~~~i~~~l~~l~~~~~~~~~~~EIIvVDDgS~D~T~~il~~~~~~~~~~v~~i~~~~n-~G~~~------------ 80 (325)
T PRK10714 14 VYNEQESLPELIRRTTAACESLGKEYEILLIDDGSSDNSAEMLVEAAQAPDSHIVAILLNRN-YGQHS------------ 80 (325)
T ss_pred ccCchhhHHHHHHHHHHHHHhCCCCEEEEEEeCCCCCcHHHHHHHHHhhcCCcEEEEEeCCC-CCHHH------------
Confidence 689999999999998753211134679999999998888888765421 112222212232 23211
Q ss_pred HHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHH
Q 019888 80 KWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAA 116 (334)
Q Consensus 80 k~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l 116 (334)
|+...++.-..|.+++++.|+...|+.+.-|-+.+
T Consensus 81 --A~~~G~~~A~gd~vv~~DaD~q~~p~~i~~l~~~~ 115 (325)
T PRK10714 81 --AIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKA 115 (325)
T ss_pred --HHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHH
Confidence 44444544458999999999999999987777755
No 57
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=97.03 E-value=0.013 Score=55.40 Aligned_cols=106 Identities=20% Similarity=0.310 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHH----HHHHhhCCCcceEEeccCCCCCCCCCCchhHHHHHHHHHHHH
Q 019888 7 NYLERTINSVFKYQGSVASKYPLFVSQDGSNPQV----KSKALSYDKLTYMQHLDFEPVHADNPGELTAYYKIARHYKWA 82 (334)
Q Consensus 7 ~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~ev----r~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk~a 82 (334)
+.|+.||++|.+... ...++|+|..||+.++. .++++.......+.+...... ...|+-.+.|
T Consensus 17 ~~l~~~l~~l~~~~~--~~~~eiIvvd~~s~~~~~~~l~~~~~~~~~~~~i~~~~~~~~-----------f~~a~arN~g 83 (281)
T PF10111_consen 17 ERLRNCLESLSQFQS--DPDFEIIVVDDGSSDEFDEELKKLCEKNGFIRYIRHEDNGEP-----------FSRAKARNIG 83 (281)
T ss_pred HHHHHHHHHHHhcCC--CCCEEEEEEECCCchhHHHHHHHHHhccCceEEEEcCCCCCC-----------cCHHHHHHHH
Confidence 446667999999764 48889999999987665 344444432224443321110 1123323334
Q ss_pred HHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcC-CCCEEEEe
Q 019888 83 LDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDK-DKSIMAVS 129 (334)
Q Consensus 83 l~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~-D~~I~~IS 129 (334)
+..+ ..+.+++++-||.++|+|+.-+.+.+..+.. ...+.+..
T Consensus 84 ~~~A----~~d~l~flD~D~i~~~~~i~~~~~~~~~l~~~~~~~~~~p 127 (281)
T PF10111_consen 84 AKYA----RGDYLIFLDADCIPSPDFIEKLLNHVKKLDKNPNAFLVYP 127 (281)
T ss_pred HHHc----CCCEEEEEcCCeeeCHHHHHHHHHHHHHHhcCCCceEEEe
Confidence 4444 4899999999999999999988882223333 33444433
No 58
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=96.83 E-value=0.0051 Score=59.97 Aligned_cols=114 Identities=18% Similarity=0.206 Sum_probs=74.0
Q ss_pred cccchHHHHHHHHHHHhcCCC-----CCCCccEEEEeCCCCHHHHHHHhhCCC-----cceEEeccCCCCCCCCCCchhH
Q 019888 2 ACNRANYLERTINSVFKYQGS-----VASKYPLFVSQDGSNPQVKSKALSYDK-----LTYMQHLDFEPVHADNPGELTA 71 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~-----~~~~~~l~Is~Dg~~~evr~vi~~~~~-----~~~i~~~~~~~~~~~~~~~~~~ 71 (334)
+||..+.+.++|+++.++-.. ....++|+|..||+.+.|.++++.+.. -..++.+..+.| .|..+
T Consensus 78 ~yNe~~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~~i~~~~~~~~~~~~~~i~vi~~~~N-~G~~~---- 152 (333)
T PTZ00260 78 AYNEEDRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLKVAKDFWRQNINPNIDIRLLSLLRN-KGKGG---- 152 (333)
T ss_pred eCCCHHHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchHHHHHHHHHhcCCCCCcEEEEEcCCC-CChHH----
Confidence 799999999999999875210 024679999999998888888876531 012333333333 24322
Q ss_pred HHHHHHHHHHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCC
Q 019888 72 YYKIARHYKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSW 131 (334)
Q Consensus 72 y~~ia~Hyk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~ 131 (334)
|+...+..-..+.+++++.|....|+.+.-+.+.+.-+.+ +.+-.|.|.
T Consensus 153 ----------A~~~Gi~~a~gd~I~~~DaD~~~~~~~l~~l~~~l~~~~~-~~~dvV~Gs 201 (333)
T PTZ00260 153 ----------AVRIGMLASRGKYILMVDADGATDIDDFDKLEDIMLKIEQ-NGLGIVFGS 201 (333)
T ss_pred ----------HHHHHHHHccCCEEEEEeCCCCCCHHHHHHHHHHHHHhhc-cCCceEEee
Confidence 3333333334799999999999999998877766544332 344444443
No 59
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=96.62 E-value=0.0097 Score=61.42 Aligned_cols=99 Identities=15% Similarity=0.296 Sum_probs=63.8
Q ss_pred cccchHHHHHHHHHHHhc-CCCCCCCccEEEEeCCCCHHHHHHHhh----CCCcceEEeccCCCCCCCCCCchhHHHHHH
Q 019888 2 ACNRANYLERTINSVFKY-QGSVASKYPLFVSQDGSNPQVKSKALS----YDKLTYMQHLDFEPVHADNPGELTAYYKIA 76 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~-~~~~~~~~~l~Is~Dg~~~evr~vi~~----~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia 76 (334)
|||-.+.+.++|+++++. .+ +++.|+|..|+++++|.+.++. +..+..+.....++ .++ +
T Consensus 74 A~NE~~vI~~~l~s~L~~ldY---~~~eIiVv~d~ndd~T~~~v~~l~~~~p~v~~vv~~~~gp--~~K----------a 138 (504)
T PRK14716 74 AWREADVIGRMLEHNLATLDY---ENYRIFVGTYPNDPATLREVDRLAARYPRVHLVIVPHDGP--TSK----------A 138 (504)
T ss_pred ccCchhHHHHHHHHHHHcCCC---CCeEEEEEECCCChhHHHHHHHHHHHCCCeEEEEeCCCCC--CCH----------H
Confidence 688899999999997544 44 5688999999988776666554 33332222211111 111 1
Q ss_pred HHHHHHHHHHhh--h---cCccEEEEEccCceeChhHHHHHHHH
Q 019888 77 RHYKWALDNLFY--K---HNFSRVIILEDDMEIAPDFFDYFEAA 115 (334)
Q Consensus 77 ~Hyk~al~~vF~--~---~~~~~vIiLEDDl~~sPdFf~y~~~~ 115 (334)
.--++|+..++. . -++|.+++++-|..++|+++..+++.
T Consensus 139 ~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~v~Pd~Lr~~~~~ 182 (504)
T PRK14716 139 DCLNWIYQAIFAFERERGIRFAIIVLHDAEDVIHPLELRLYNYL 182 (504)
T ss_pred HHHHHHHHHHHHhhhhcCCCcCEEEEEcCCCCcCccHHHHHHhh
Confidence 122335544432 1 12589999999999999999988764
No 60
>PF01755 Glyco_transf_25: Glycosyltransferase family 25 (LPS biosynthesis protein); InterPro: IPR002654 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 25 GT25 from CAZY comprises enzymes with only one known activity; as a lipopolysaccharide biosynthesis protein. These enzymes catalyse the transfer of various sugars onto the growing lipopolysaccharide chain during its biosynthesis [].; GO: 0009103 lipopolysaccharide biosynthetic process
Probab=95.91 E-value=0.045 Score=48.73 Aligned_cols=99 Identities=22% Similarity=0.282 Sum_probs=59.0
Q ss_pred chHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCC-cce---EEeccCCCCCCCCCCchhHHHHHHHHHH
Q 019888 5 RANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDK-LTY---MQHLDFEPVHADNPGELTAYYKIARHYK 80 (334)
Q Consensus 5 Rp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~-~~~---i~~~~~~~~~~~~~~~~~~y~~ia~Hyk 80 (334)
+++-..++.+.+.+.. -.++.+=+.||......+....++. ... -+.+..++ .||.-+ |++
T Consensus 12 ~~~Rr~~~~~~~~~~~----~~~e~~~Avdg~~l~~~~~~~~~~~~~~~~~~~~~lt~gE--iGC~lS---------H~~ 76 (200)
T PF01755_consen 12 STERRERIQQQLAKLG----INFEFFDAVDGRDLSEDELFRRYDPELFKKRYGRPLTPGE--IGCALS---------HIK 76 (200)
T ss_pred CHHHHHHHHHHHHHcC----CceEEEEeecccccchHHHHHHhhhhhhhccccccCCcce--Eeehhh---------HHH
Confidence 4555555666666553 3578888889986554444443332 111 01111122 356322 222
Q ss_pred HHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhc
Q 019888 81 WALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLD 120 (334)
Q Consensus 81 ~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~ 120 (334)
+...+.+. +.+.++|||||..++++|-+.++.++....
T Consensus 77 -~w~~~v~~-~~~~~lIlEDDv~~~~~f~~~l~~~~~~~~ 114 (200)
T PF01755_consen 77 -AWQRIVDS-GLEYALILEDDVIFDPDFKEFLEEILSHIP 114 (200)
T ss_pred -HHHHHHHc-CCCeEEEEeccccccccHHHHHHHHHhhcc
Confidence 44555544 579999999999999999999888776654
No 61
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=95.35 E-value=0.063 Score=57.86 Aligned_cols=99 Identities=14% Similarity=0.196 Sum_probs=63.0
Q ss_pred cccchHHHHHHHHHHH-hcCCCCCCCccEEEEeCCCCHHHHHHHh----hCCCcceEEeccCCCCCCCCCCchhHHHHHH
Q 019888 2 ACNRANYLERTINSVF-KYQGSVASKYPLFVSQDGSNPQVKSKAL----SYDKLTYMQHLDFEPVHADNPGELTAYYKIA 76 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~-~~~~~~~~~~~l~Is~Dg~~~evr~vi~----~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia 76 (334)
|||-...+.+++++++ +..++ .+.|+|..|+++.+|.++++ .+..+.-+.....++ .+++
T Consensus 71 a~nE~~vi~~~i~~ll~~ldYP---~~eI~vi~~~nD~~T~~~~~~l~~~~p~~~~v~~~~~g~--~gKa---------- 135 (727)
T PRK11234 71 AWNETGVIGNMAELAATTLDYE---NYHIFVGTYPNDPATQADVDAVCARFPNVHKVVCARPGP--TSKA---------- 135 (727)
T ss_pred cCcchhhHHHHHHHHHHhCCCC---CeEEEEEecCCChhHHHHHHHHHHHCCCcEEEEeCCCCC--CCHH----------
Confidence 5788999999999986 45654 37999987766656655554 444343232222111 2332
Q ss_pred HHHHHHHHHHhhhc-----CccEEEEEccCceeChhHHHHHHHH
Q 019888 77 RHYKWALDNLFYKH-----NFSRVIILEDDMEIAPDFFDYFEAA 115 (334)
Q Consensus 77 ~Hyk~al~~vF~~~-----~~~~vIiLEDDl~~sPdFf~y~~~~ 115 (334)
.--++|+..++... .++-+||.|-|+.++||++.+++.+
T Consensus 136 ~aLN~~l~~~~~~e~~~~~~~~vvvi~DAD~~v~pd~L~~~~~l 179 (727)
T PRK11234 136 DCLNNVLDAITQFERSANFAFAGFILHDAEDVISPMELRLFNYL 179 (727)
T ss_pred HHHHHHHHHHHhhhcccCCcccEEEEEcCCCCCChhHHHHHHhh
Confidence 22233666654321 3577899999999999999977654
No 62
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=94.75 E-value=0.11 Score=55.57 Aligned_cols=107 Identities=16% Similarity=0.321 Sum_probs=65.4
Q ss_pred cccchHHHHHHHHHHH-hcCCCCCCCccEEEEeCCCCHHHHHHHhhC----CCcceEEeccCCCCCCCCCCchhHHHHHH
Q 019888 2 ACNRANYLERTINSVF-KYQGSVASKYPLFVSQDGSNPQVKSKALSY----DKLTYMQHLDFEPVHADNPGELTAYYKIA 76 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~-~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~----~~~~~i~~~~~~~~~~~~~~~~~~y~~ia 76 (334)
|||-.+.+.+++++++ +..++ .+.|+|..+..+.+|.+.++.. ..+.-|..+..++ .++ +
T Consensus 79 a~nE~~VI~~~v~~ll~~ldYp---~~~I~v~~~~nD~~T~~~~~~~~~~~p~~~~v~~~~~gp--~gK----------a 143 (703)
T PRK15489 79 AWKEYDVIAKMIENMLATLDYR---RYVIFVGTYPNDAETITEVERMRRRYKRLVRVEVPHDGP--TCK----------A 143 (703)
T ss_pred CCCcHHHHHHHHHHHHhcCCCC---CeEEEEEecCCCccHHHHHHHHhccCCcEEEEEcCCCCC--CCH----------H
Confidence 6889999999999975 65664 4678885433333555555443 2334444333222 122 2
Q ss_pred HHHHHHHHHHhhhc-----CccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEE
Q 019888 77 RHYKWALDNLFYKH-----NFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMA 127 (334)
Q Consensus 77 ~Hyk~al~~vF~~~-----~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ 127 (334)
.--+||+..+|... .++.+++.+-|.+++|+++.+|+..+ .++.+..
T Consensus 144 ~ALN~~l~~~~~~e~~~~~~fa~vvi~DAEd~~~P~~L~~~~~~~----~~~~~iQ 195 (703)
T PRK15489 144 DCLNWIIQAIFRYEAGHGIEFAGVILHDSEDVLHPLELKYFNYLL----PRKDLVQ 195 (703)
T ss_pred HHHHHHHHHHHhhhhhccCccceEEEEcCCCCCChhHHHHHHhhc----CCcceee
Confidence 22344666665421 14458999999999999999997543 3445543
No 63
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=94.23 E-value=0.14 Score=46.31 Aligned_cols=99 Identities=17% Similarity=0.212 Sum_probs=58.3
Q ss_pred ccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhh----CCCcceEEeccCCCCCCCCCCchhHHHHHHHH
Q 019888 3 CNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALS----YDKLTYMQHLDFEPVHADNPGELTAYYKIARH 78 (334)
Q Consensus 3 ~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~----~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~H 78 (334)
||--+-+.-++.-+.+.-+....+++|+|..|++.+-|.+++++ ++.. .|....+.. ..|+...
T Consensus 12 YnEk~Nlpi~~~li~~~~~e~~~~~eiIivDD~SpDGt~~~a~~L~k~yg~d-~i~l~pR~~-klGLgtA---------- 79 (238)
T KOG2978|consen 12 YNEKENLPIITRLIAKYMSEEGKKYEIIIVDDASPDGTQEVAKALQKIYGED-NILLKPRTK-KLGLGTA---------- 79 (238)
T ss_pred ccCCCCCeeeHHHHHhhhhhhcCceEEEEEeCCCCCccHHHHHHHHHHhCCC-cEEEEeccC-cccchHH----------
Confidence 44433344344444444433457889999999986655555554 4432 222222222 2344222
Q ss_pred HHHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHH
Q 019888 79 YKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAAD 117 (334)
Q Consensus 79 yk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~ 117 (334)
|.-|+.+. ..+++|+++-|+-=+|-|+.=|-++.+
T Consensus 80 y~hgl~~a----~g~fiviMDaDlsHhPk~ipe~i~lq~ 114 (238)
T KOG2978|consen 80 YIHGLKHA----TGDFIVIMDADLSHHPKFIPEFIRLQK 114 (238)
T ss_pred HHhhhhhc----cCCeEEEEeCccCCCchhHHHHHHHhh
Confidence 22355444 379999999999999999987777543
No 64
>PF04666 Glyco_transf_54: N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region; InterPro: IPR006759 The complex-type of oligosaccharides are synthesised through elongation by glycosyltransferases after trimming of the precursor oligosaccharides transferred to proteins in the endoplasmic reticulum. N-Acetylglucosaminyltransferases (GnTs) take part in the formation of branches in the biosynthesis of complex-type sugar chains. In vertebrates, six GnTs, designated as GnT-I to -VI, which catalyse the transfer of GlcNAc to the core mannose residues of Asn-linked sugar chains, have been identified. GnT-IV (2.4.1.145 from EC) catalyzes the transfer of GlcNAc from UDP-GlcNAc to the GlcNAc1-2Man1-3 arm of core oligosaccharide [Gn2(22)core oligosaccharide] and forms a GlcNAc1-4(GlcNAc1-2)Man1-3 structure on the core oligosaccharide (Gn3(2,4,2)core oligosaccharide). In some members the conserved region occupies all but the very N-terminal, where there is a signal sequence on all members. For other members the conserved region does not occupy the entire protein but is still to the N-terminal end of the protein [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane
Probab=90.18 E-value=3.5 Score=39.86 Aligned_cols=30 Identities=23% Similarity=0.326 Sum_probs=27.6
Q ss_pred ccEEEEEccCceeChhHHHHHHHHHHhhcC
Q 019888 92 FSRVIILEDDMEIAPDFFDYFEAAADLLDK 121 (334)
Q Consensus 92 ~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~ 121 (334)
.++.+.||||.+.+|+|+..+...+...+.
T Consensus 170 ~~YyL~LEDDVia~~~f~~~i~~~v~~~~~ 199 (297)
T PF04666_consen 170 GDYYLQLEDDVIAAPGFLSRIKRFVEAWES 199 (297)
T ss_pred CCeEEEecCCeEechhHHHHHHHHHHHhcC
Confidence 689999999999999999999999888765
No 65
>cd06532 Glyco_transf_25 Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis. The members include the beta(1,4) galactosyltransferases: Lgt2 of Moraxella catarrhalis, LgtB and LgtE of Neisseria gonorrhoeae and Lic2A of Haemophilus influenzae. M. catarrhalis Lgt2 catalyzes the addition of galactose (Gal) to the growing chain of LOS on the cell surface. N. gonorrhoeae LgtB and LgtE link Gal-beta(1,4) to GlcNAc (N-acetylglucosamine) and Glc (glucose), respectively. The genes encoding LgtB and LgtE are two genes of a five gene locus involved in the synthesis of gonococcal LOS. LgtE is believed to perform the first step in LOS biosynthesis.
Probab=89.73 E-value=0.54 Score=39.24 Aligned_cols=88 Identities=23% Similarity=0.355 Sum_probs=45.6
Q ss_pred cchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCcceEEecc--CCCCCCCCCCchhHHHHHHHHHHH
Q 019888 4 NRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKLTYMQHLD--FEPVHADNPGELTAYYKIARHYKW 81 (334)
Q Consensus 4 NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~~~i~~~~--~~~~~~~~~~~~~~y~~ia~Hyk~ 81 (334)
+||+-..++.+.+.... -.+..+=+.||.............. ....... ..+.-.||. ..|++
T Consensus 9 ~~~~Rr~~~~~~~~~~~----~~~~~~~Avd~~~~~~~~~~~~~~~-~~~~~~~~~l~~gEiGC~---------lSH~~- 73 (128)
T cd06532 9 RSTDRRERMEAQLAALG----LDFEFFDAVDGKDLSEEELAALYDA-LFLPRYGRPLTPGEIGCF---------LSHYK- 73 (128)
T ss_pred CCHHHHHHHHHHHHHcC----CCeEEEeccccccCCHHHHHHHhHH-HhhhhcCCCCChhhHHHH---------HHHHH-
Confidence 46666666666665543 3567887888875433333222111 0000000 001012331 22322
Q ss_pred HHHHHhhhcCccEEEEEccCceeChh
Q 019888 82 ALDNLFYKHNFSRVIILEDDMEIAPD 107 (334)
Q Consensus 82 al~~vF~~~~~~~vIiLEDDl~~sPd 107 (334)
+...+.+. +.+.++|||||..++|+
T Consensus 74 ~w~~~~~~-~~~~alIlEDDv~~~~~ 98 (128)
T cd06532 74 LWQKIVES-NLEYALILEDDAILDPD 98 (128)
T ss_pred HHHHHHHc-CCCeEEEEccCcEECCC
Confidence 34445443 57999999999999999
No 66
>PF03214 RGP: Reversibly glycosylated polypeptide; InterPro: IPR004901 Alpha-1,4-glucan-protein synthase catalyses the reaction: protein + UDP-D-glucose = alpha-D-glucosyl-protein + UDP The enzyme has a possible role in the synthesis of cell wall polysaccharides in plants []. It is found associated with the cell wall, with the highest concentrations in the plasmodesmata. It is also located in the Golgi apparatus.; GO: 0008466 glycogenin glucosyltransferase activity, 0016758 transferase activity, transferring hexosyl groups, 0007047 cellular cell wall organization, 0030244 cellulose biosynthetic process, 0005618 cell wall, 0030054 cell junction
Probab=87.05 E-value=0.26 Score=48.08 Aligned_cols=87 Identities=20% Similarity=0.192 Sum_probs=47.3
Q ss_pred HHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCcceEE-eccCCCCCCCCCCchhHHHHHHHHHHHHHHHHhhhcCccE
Q 019888 16 VFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKLTYMQ-HLDFEPVHADNPGELTAYYKIARHYKWALDNLFYKHNFSR 94 (334)
Q Consensus 16 L~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~~~i~-~~~~~~~~~~~~~~~~~y~~ia~Hyk~al~~vF~~~~~~~ 94 (334)
|..-+| --+.++|||.|||.-.+.-++-+.|+- ++. +-+.+.. +|.+ ..+.| +-|-...+..+.++ .++
T Consensus 25 ~~~wr~-~~~~~hliiv~d~~~~~~~~~p~g~~~--~~y~~~di~~~-lg~~-~~i~~---~~~a~R~fGyL~s~--~~y 94 (348)
T PF03214_consen 25 LEEWRP-FFSPYHLIIVQDPDPNEEIKVPEGFDY--EVYNRNDIERV-LGAK-TLIPF---KGDACRNFGYLVSK--KDY 94 (348)
T ss_pred HHHHHH-hhcceeEEEEeCCCccccccCCcccce--eeecHhhHHhh-cCCc-ccccc---cccchhhhHhhhcc--cce
Confidence 333444 357889999999987666666666542 111 1110110 1211 11111 01111233344444 699
Q ss_pred EEEEccCceeChhHHHHH
Q 019888 95 VIILEDDMEIAPDFFDYF 112 (334)
Q Consensus 95 vIiLEDDl~~sPdFf~y~ 112 (334)
+|.++|||.++.|++-..
T Consensus 95 ivsiDDD~~P~~D~~g~~ 112 (348)
T PF03214_consen 95 IVSIDDDCLPAKDDFGTH 112 (348)
T ss_pred EEEEccccccccCCccce
Confidence 999999999999988443
No 67
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=86.49 E-value=1.6 Score=38.50 Aligned_cols=47 Identities=17% Similarity=0.339 Sum_probs=36.2
Q ss_pred HHHHHhhh-cCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCCC
Q 019888 82 ALDNLFYK-HNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSWN 132 (334)
Q Consensus 82 al~~vF~~-~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~n 132 (334)
.|...++. -++|.++|+++|+.++||++.-+.+-+ .||.+..|++.-
T Consensus 21 nL~~~~~~~a~~d~~~~~DsDi~v~p~~L~~lv~~l----~~p~vglVt~~~ 68 (175)
T PF13506_consen 21 NLAQGLEAGAKYDYLVISDSDIRVPPDYLRELVAPL----ADPGVGLVTGLP 68 (175)
T ss_pred HHHHHHHhhCCCCEEEEECCCeeECHHHHHHHHHHH----hCCCCcEEEecc
Confidence 34444444 469999999999999999988777654 458999998753
No 68
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=82.86 E-value=6.1 Score=36.26 Aligned_cols=102 Identities=20% Similarity=0.339 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhC----CCcceEEeccCCCCCCCCCCchhHHHHHHHHHHHH
Q 019888 7 NYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSY----DKLTYMQHLDFEPVHADNPGELTAYYKIARHYKWA 82 (334)
Q Consensus 7 ~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~----~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk~a 82 (334)
..+.-++.||+++.+. ..+.++|..|+-.++.++.++++ +.-..+...+.+. ...... .......+..+|.-
T Consensus 13 ~~~~~~l~Sl~~~~~~--~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~i~~~~-~~~~~~-~~~~~~~~~y~rl~ 88 (248)
T cd04194 13 PYLAVTIKSILANNSK--RDYDFYILNDDISEENKKKLKELLKKYNSSIEFIKIDNDD-FKFFPA-TTDHISYATYYRLL 88 (248)
T ss_pred HHHHHHHHHHHhcCCC--CceEEEEEeCCCCHHHHHHHHHHHHhcCCeEEEEEcCHHH-HhcCCc-ccccccHHHHHHHH
Confidence 5678899999998742 67889999998777666666554 2111111121110 001000 01112334456666
Q ss_pred HHHHhhhcCccEEEEEccCceeChhHHHHHHH
Q 019888 83 LDNLFYKHNFSRVIILEDDMEIAPDFFDYFEA 114 (334)
Q Consensus 83 l~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~ 114 (334)
+..++.. ++++|.|+-|+++--|.=+.++.
T Consensus 89 l~~ll~~--~~rvlylD~D~lv~~di~~L~~~ 118 (248)
T cd04194 89 IPDLLPD--YDKVLYLDADIIVLGDLSELFDI 118 (248)
T ss_pred HHHHhcc--cCEEEEEeCCEEecCCHHHHhcC
Confidence 6777763 99999999999998887766643
No 69
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=82.83 E-value=8.5 Score=35.21 Aligned_cols=45 Identities=18% Similarity=0.353 Sum_probs=30.2
Q ss_pred HHHHHhhhcCccEEEEEccCceeC-hhHHHHHHHHHHhhcCCCCEEEEe
Q 019888 82 ALDNLFYKHNFSRVIILEDDMEIA-PDFFDYFEAAADLLDKDKSIMAVS 129 (334)
Q Consensus 82 al~~vF~~~~~~~vIiLEDDl~~s-PdFf~y~~~~l~~y~~D~~I~~IS 129 (334)
|.++..+.-+++++|++=||..+. ++|+ ..+++.++.|+++..|.
T Consensus 45 ~yN~a~~~a~~~ylvflHqDv~i~~~~~l---~~il~~~~~~~~~G~iG 90 (217)
T PF13712_consen 45 AYNEAMEKAKAKYLVFLHQDVFIINENWL---EDILEIFEEDPNIGMIG 90 (217)
T ss_dssp HHHHHGGG--SSEEEEEETTEE-SSHHHH---HHHHHHHHH-TTEEEEE
T ss_pred HHHHHHHhCCCCEEEEEeCCeEEcchhHH---HHHHHHHhhCCCccEEE
Confidence 555556555689999999999985 6666 55666667789986654
No 70
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=82.35 E-value=6.4 Score=36.31 Aligned_cols=106 Identities=13% Similarity=0.153 Sum_probs=65.1
Q ss_pred cchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCC--cceEEeccCCCCCCCCCCchhHHHHHHHHHHH
Q 019888 4 NRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDK--LTYMQHLDFEPVHADNPGELTAYYKIARHYKW 81 (334)
Q Consensus 4 NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~--~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk~ 81 (334)
|.-.++.-++.||+++.. ....++|..|+-.++.++.++.... -+.++-...+............+..++..+|.
T Consensus 11 ~y~~~~~v~i~Sl~~~~~---~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~y~RL 87 (246)
T cd00505 11 EYLRGAIVLMKSVLRHRT---KPLRFHVLTNPLSDTFKAALDNLRKLYNFNYELIPVDILDSVDSEHLKRPIKIVTLTKL 87 (246)
T ss_pred chhHHHHHHHHHHHHhCC---CCeEEEEEEccccHHHHHHHHHHHhccCceEEEEeccccCcchhhhhcCccccceeHHH
Confidence 455678889999999864 2678899889877666665554321 01121111111000000000123345666777
Q ss_pred HHHHHhhhcCccEEEEEccCceeChhHHHHHHH
Q 019888 82 ALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEA 114 (334)
Q Consensus 82 al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~ 114 (334)
.+..++.. +++||.|+.|+++--|.=+.++.
T Consensus 88 ~i~~llp~--~~kvlYLD~D~iv~~di~~L~~~ 118 (246)
T cd00505 88 HLPNLVPD--YDKILYVDADILVLTDIDELWDT 118 (246)
T ss_pred HHHHHhhc--cCeEEEEcCCeeeccCHHHHhhc
Confidence 78888863 99999999999998887776654
No 71
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=77.62 E-value=3.1 Score=37.28 Aligned_cols=119 Identities=14% Similarity=0.161 Sum_probs=61.0
Q ss_pred chHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCC-c---ceEEeccCCCCC-CCCCCchhHHHHHHHHH
Q 019888 5 RANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDK-L---TYMQHLDFEPVH-ADNPGELTAYYKIARHY 79 (334)
Q Consensus 5 Rp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~-~---~~i~~~~~~~~~-~~~~~~~~~y~~ia~Hy 79 (334)
.-..+.-++.||++..+ ....+.++|..|+-.++..+.++.... + ..+......... .........+...+.++
T Consensus 10 y~~~~~v~i~Sl~~~~~-~~~~~~i~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (250)
T PF01501_consen 10 YLEGAAVLIKSLLKNNP-DPSNLHIYIITDDISEEDFEKLRALAAEVIEIEPIEFPDISMLEEFQFNSPSKRHFSPATFA 88 (250)
T ss_dssp GHHHHHHHHHHHHHTTT-T-SSEEEEEEESSS-HHHHHHHHHHSCCCCTTECEEETSGGHHH--TTS-HCCTCGGGGGGG
T ss_pred HHHHHHHHHHHHHHhcc-ccccceEEEecCCCCHHHHHHHhhhcccccceeeeccchHHhhhhhhhcccccccccHHHHH
Confidence 34567788999999885 235667888888877666655544332 2 222222211000 00000000111233445
Q ss_pred HHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeC
Q 019888 80 KWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSS 130 (334)
Q Consensus 80 k~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa 130 (334)
|.-+-.+|. +++++|.|+.|.++--|-=+.|.. -..+.-+.++..
T Consensus 89 rl~i~~ll~--~~drilyLD~D~lv~~dl~~lf~~----~~~~~~~~a~~~ 133 (250)
T PF01501_consen 89 RLFIPDLLP--DYDRILYLDADTLVLGDLDELFDL----DLQGKYLAAVED 133 (250)
T ss_dssp GGGHHHHST--TSSEEEEE-TTEEESS-SHHHHC-------TTSSEEEEE-
T ss_pred HhhhHHHHh--hcCeEEEEcCCeeeecChhhhhcc----cchhhhcccccc
Confidence 555666664 499999999999997765555543 223445565554
No 72
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=76.87 E-value=14 Score=38.62 Aligned_cols=105 Identities=14% Similarity=0.258 Sum_probs=67.6
Q ss_pred HHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHH--------HHHhhCCCcceEEeccCCCCCCCCCCchhHHHHHHHHHH
Q 019888 9 LERTINSVFKYQGSVASKYPLFVSQDGSNPQVK--------SKALSYDKLTYMQHLDFEPVHADNPGELTAYYKIARHYK 80 (334)
Q Consensus 9 l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr--------~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk 80 (334)
|+.+-+||.+-- ..+.|.+||-+|-.+++++ .+.++.++.+.|--.-+..|-..++|++..+- .+
T Consensus 164 LrA~~eSla~Tg--~~~~FD~FVLSDs~dpdialAEq~a~~~l~~e~~g~~~ifYRrRr~n~~RKaGNIaDfc-----rR 236 (736)
T COG2943 164 LRATYESLAATG--HAEHFDFFVLSDSRDPDIALAEQKAWAELCRELGGEGNIFYRRRRRNVKRKAGNIADFC-----RR 236 (736)
T ss_pred HHHHHHHHHhhC--CcccceEEEEcCCCCchhhhhHHHHHHHHHHHhCCCCceeeehHhhhhcccccCHHHHH-----HH
Confidence 566677777754 5899999999999876533 24445454454432223333334455554310 11
Q ss_pred HHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeC
Q 019888 81 WALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSS 130 (334)
Q Consensus 81 ~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa 130 (334)
|| + .|++.+||+-|-+.++|-+ ..+..+++.+|...-|-.
T Consensus 237 wG-----~--~Y~~MlVLDADSvMtgd~l---vrLv~~ME~~P~aGlIQt 276 (736)
T COG2943 237 WG-----S--AYSYMLVLDADSVMTGDCL---VRLVRLMEANPDAGLIQT 276 (736)
T ss_pred hC-----c--ccceEEEeecccccCchHH---HHHHHHHhhCCCCceeec
Confidence 21 1 3999999999999999976 566667889998775543
No 73
>COG3306 Glycosyltransferase involved in LPS biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=72.49 E-value=5.3 Score=37.76 Aligned_cols=29 Identities=34% Similarity=0.637 Sum_probs=26.0
Q ss_pred CccEEEEEccCceeChhHHHHHHHHHHhh
Q 019888 91 NFSRVIILEDDMEIAPDFFDYFEAAADLL 119 (334)
Q Consensus 91 ~~~~vIiLEDDl~~sPdFf~y~~~~l~~y 119 (334)
+..++.|+|||.+++.||-...+..+...
T Consensus 86 ~~~yi~I~EDDV~l~~~f~~~l~~~~~~~ 114 (255)
T COG3306 86 NLPYILILEDDVVLGEDFEEFLEDDLKLP 114 (255)
T ss_pred CCCeEEEecccccccccHHHHHHHHHhhh
Confidence 57899999999999999999999987664
No 74
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane
Probab=70.72 E-value=27 Score=30.86 Aligned_cols=86 Identities=17% Similarity=0.148 Sum_probs=42.7
Q ss_pred HHHHHhhhcC-ccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCCCCCCCccccC---CCceeeecC----CCC
Q 019888 82 ALDNLFYKHN-FSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSWNDNGQKQFVH---DPYVLYRSD----FFP 153 (334)
Q Consensus 82 al~~vF~~~~-~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~ndng~~~~~~---~~~~lyrs~----~fp 153 (334)
++.|+.+..+ ++.++.++||+.+-++=+.-.......-.....++|-...+......... -+...|... +..
T Consensus 70 ~~~w~~~~c~~~~~v~k~DDD~~vn~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~r~~~~kw~v~~~~y~~~~yP~y~~ 149 (195)
T PF01762_consen 70 GLKWASKHCPNAKYVLKVDDDVFVNPDRLVSFLKSLKQDPSKNSIYGGCIKNGPPIRDPSSKWYVSEEEYPDDYYPPYCS 149 (195)
T ss_pred HHHHHHhhCCchhheeecCcEEEEehHHhhhhhhhcccCccccccccccccCCccccccccCceeeeeecccccCCCcCC
Confidence 4444544433 89999999999998764432222111123334444443333211111000 012223222 345
Q ss_pred cccccccchhhhhh
Q 019888 154 GLGWMLTRTTWDEL 167 (334)
Q Consensus 154 ~~GW~~~r~~W~el 167 (334)
|-|+++++++=+.|
T Consensus 150 G~~yvls~~~v~~i 163 (195)
T PF01762_consen 150 GGGYVLSSDVVKRI 163 (195)
T ss_pred CCeEEecHHHHHHH
Confidence 78888888876643
No 75
>PF11316 Rhamno_transf: Putative rhamnosyl transferase ; InterPro: IPR021466 This bacterial family of proteins has no known function.
Probab=70.68 E-value=32 Score=32.10 Aligned_cols=87 Identities=17% Similarity=0.166 Sum_probs=51.0
Q ss_pred HHHHHHHhcCCCCCCCccEEEEeCCC-CHH----HHHHHhhCCCcceEEeccCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 019888 11 RTINSVFKYQGSVASKYPLFVSQDGS-NPQ----VKSKALSYDKLTYMQHLDFEPVHADNPGELTAYYKIARHYKWALDN 85 (334)
Q Consensus 11 r~L~sL~~~~~~~~~~~~l~Is~Dg~-~~e----vr~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk~al~~ 85 (334)
-||-||+++.. ..|.++|..|.. .+. ++++++.+.++.- ...++. . .+ -++..
T Consensus 46 ~~LpSl~~QTd---~dF~~lv~~~~~~P~~~~~rL~~l~~~~p~~~i---~~~~~~------~--~~--------~~~~~ 103 (234)
T PF11316_consen 46 YCLPSLRAQTD---QDFTWLVLFDDDLPEPYRERLRDLLADYPQFRI---VFRPPG------P--HR--------DAMRR 103 (234)
T ss_pred HHhhHHHhccC---CCeEEEEEECCCCCHHHHHHHHHHhccCCCcEE---EecCCc------h--HH--------HHHHH
Confidence 48999999884 468888766665 333 3344444433222 222221 1 11 14455
Q ss_pred Hhhhc---CccEEEE--EccCceeChhHHHHHHHHHHhh
Q 019888 86 LFYKH---NFSRVII--LEDDMEIAPDFFDYFEAAADLL 119 (334)
Q Consensus 86 vF~~~---~~~~vIi--LEDDl~~sPdFf~y~~~~l~~y 119 (334)
+++.. +.+.+|. ||||--+++||..-+.+....+
T Consensus 104 ~~~~~~~~~~~~~~~~RLDdDDAl~~dFV~rlr~~a~~~ 142 (234)
T PF11316_consen 104 AINAARRDGADPVLQFRLDDDDALHRDFVARLRRAAADL 142 (234)
T ss_pred HHhhhccCCCCEEEEEEECCcchhhHHHHHHHHHHHHhc
Confidence 54211 2555554 5999999999999988876543
No 76
>cd00218 GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43).
Probab=65.36 E-value=88 Score=29.12 Aligned_cols=102 Identities=16% Similarity=0.077 Sum_probs=65.5
Q ss_pred cccch---HHHHHHHHHHHhcCCCCCCCccEEEEeCCC--CHHHHHHHhhCCCcceEEeccCCCC-CCCCCCchhHHHHH
Q 019888 2 ACNRA---NYLERTINSVFKYQGSVASKYPLFVSQDGS--NPQVKSKALSYDKLTYMQHLDFEPV-HADNPGELTAYYKI 75 (334)
Q Consensus 2 a~NRp---~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~--~~evr~vi~~~~~~~~i~~~~~~~~-~~~~~~~~~~y~~i 75 (334)
+|.|| -+|-|+-..|+...+. .=||.-|+. .++|+++++.-+ +.+.+.....+. ..... . +-
T Consensus 9 Ty~R~~Q~~~LtRLa~TL~lVp~l-----~WIVVEd~~~~t~~va~lL~~sg-l~y~HL~~~~~~~~~~~~----~--rg 76 (223)
T cd00218 9 TYARPVQKAELTRLAHTLRLVPPL-----HWIVVEDSEEKTPLVAELLRRSG-LMYTHLNAKTPSDPTWLK----P--RG 76 (223)
T ss_pred CCccchhhHHHHHHHHHHhcCCce-----EEEEEeCCCCCCHHHHHHHHHcC-CceEEeccCCCCCcccCC----c--cc
Confidence 46666 3578888888887643 667778886 568999998865 555433221110 01111 0 22
Q ss_pred HHHHHHHHHHHhhhc---CccEEEEEccCceeChhHHHHHHHH
Q 019888 76 ARHYKWALDNLFYKH---NFSRVIILEDDMEIAPDFFDYFEAA 115 (334)
Q Consensus 76 a~Hyk~al~~vF~~~---~~~~vIiLEDDl~~sPdFf~y~~~~ 115 (334)
....+.||.++=++. ..+=|.|-+||..-|-.+|+=|.+.
T Consensus 77 ~~qRn~AL~~ir~~~~~~~~GVVyFADDdN~Ysl~lF~emR~i 119 (223)
T cd00218 77 VEQRNLALRWIREHLSAKLDGVVYFADDDNTYDLELFEEMRKI 119 (223)
T ss_pred HHHHHHHHHHHHhccccCcceEEEEccCCCcccHHHHHHHhcc
Confidence 333567999987652 3577889999999998888776653
No 77
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=63.32 E-value=66 Score=24.65 Aligned_cols=86 Identities=17% Similarity=0.306 Sum_probs=51.4
Q ss_pred cchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCcceEEeccCCCCCCCCCCchhHHHHHHHHHHHHH
Q 019888 4 NRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKLTYMQHLDFEPVHADNPGELTAYYKIARHYKWAL 83 (334)
Q Consensus 4 NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk~al 83 (334)
|-...|...|...++. + .+ .++|..||+...+.++++++..+..+.... +. . .. . .-...++..+
T Consensus 2 ne~~~L~~wl~~~~~l-G--~d--~i~i~d~~s~D~t~~~l~~~~~v~i~~~~~-~~---~--~~--~--~~~~~~~~~~ 66 (97)
T PF13704_consen 2 NEADYLPEWLAHHLAL-G--VD--HIYIYDDGSTDGTREILRALPGVGIIRWVD-PY---R--DE--R--RQRAWRNALI 66 (97)
T ss_pred ChHHHHHHHHHHHHHc-C--CC--EEEEEECCCCccHHHHHHhCCCcEEEEeCC-Cc---c--ch--H--HHHHHHHHHH
Confidence 5567788888887655 2 23 689999999999999999987644443321 11 0 00 0 1111222222
Q ss_pred HHHhhhcCccEEEEEccCceeChh
Q 019888 84 DNLFYKHNFSRVIILEDDMEIAPD 107 (334)
Q Consensus 84 ~~vF~~~~~~~vIiLEDDl~~sPd 107 (334)
.... +.+.+++++=|=.+.|.
T Consensus 67 ~~~~---~~dWvl~~D~DEfl~~~ 87 (97)
T PF13704_consen 67 ERAF---DADWVLFLDADEFLVPP 87 (97)
T ss_pred HhCC---CCCEEEEEeeeEEEecC
Confidence 2222 48999999988665543
No 78
>PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B ....
Probab=62.57 E-value=91 Score=26.00 Aligned_cols=94 Identities=16% Similarity=0.245 Sum_probs=57.5
Q ss_pred HHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCcceEEeccCCCCCCCCCCchhHHHHHHHHHHHHHHHHhh
Q 019888 9 LERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKLTYMQHLDFEPVHADNPGELTAYYKIARHYKWALDNLFY 88 (334)
Q Consensus 9 l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk~al~~vF~ 88 (334)
+.++++.+.++... +|+|+.-. +++.+.+...+ +..+.... + + .+.+ . ||...+.
T Consensus 27 i~~~l~~l~~~~~~-----~Ivvv~~~--~~~~~~~~~~~-~~~v~~~~--~---~-~G~~-~----------sl~~a~~ 81 (160)
T PF12804_consen 27 IERVLEALREAGVD-----DIVVVTGE--EEIYEYLERYG-IKVVVDPE--P---G-QGPL-A----------SLLAALS 81 (160)
T ss_dssp HHHHHHHHHHHTES-----EEEEEEST--HHHHHHHTTTT-SEEEE-ST--S---S-CSHH-H----------HHHHHHH
T ss_pred HHHHHHHhhccCCc-----eEEEecCh--HHHHHHHhccC-ceEEEecc--c---c-CChH-H----------HHHHHHH
Confidence 68999999988422 67776554 56666666554 44444321 1 1 1111 1 5555555
Q ss_pred hc-CccEEEEEccCc-eeChhHHHHHHHHHHhhcCCCCEEEEe
Q 019888 89 KH-NFSRVIILEDDM-EIAPDFFDYFEAAADLLDKDKSIMAVS 129 (334)
Q Consensus 89 ~~-~~~~vIiLEDDl-~~sPdFf~y~~~~l~~y~~D~~I~~IS 129 (334)
.. +.+.++|+-=|+ .++|+.+..+...+. +....+.+.+
T Consensus 82 ~~~~~~~vlv~~~D~p~~~~~~l~~l~~~~~--~~~~~i~~~~ 122 (160)
T PF12804_consen 82 QLPSSEPVLVLPCDQPFLSPELLRRLLEALE--KSPADIVVPV 122 (160)
T ss_dssp TSTTSSEEEEEETTETTS-HHHHHHHHHHHH--HTTTSEEEEE
T ss_pred hcccCCCcEEEeCCccccCHHHHHHHHHHHh--ccCCcEEEEE
Confidence 54 579999999999 579999988887765 2345565443
No 79
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=60.97 E-value=10 Score=32.78 Aligned_cols=98 Identities=24% Similarity=0.353 Sum_probs=55.1
Q ss_pred EEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCCCCC-CCcccc---CCC-------------ceeeecCCCCccc
Q 019888 94 RVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSWNDN-GQKQFV---HDP-------------YVLYRSDFFPGLG 156 (334)
Q Consensus 94 ~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~ndn-g~~~~~---~~~-------------~~lyrs~~fp~~G 156 (334)
.|+++++|..+.||++..+.+. ++ +|++..|.+-.-. +..... .+. ..+....+++|=|
T Consensus 1 ~v~~~DaDt~~~~d~l~~~~~~---~~-~~~~~~vq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 76 (193)
T PF13632_consen 1 YVLFLDADTRLPPDFLERLVAA---LE-DPKVDAVQGPIIFRNRGSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLSGSG 76 (193)
T ss_pred CEEEEcCCCCCChHHHHHHHHH---Hh-CCCceEEEccEEecCCCChhheeehhhhhhhhhhhHHHHHhcCCCccccCcc
Confidence 3789999999999999777654 55 6777766544321 111100 000 1122333466777
Q ss_pred ccccchhhhhhCCCCC--chh-HHHHHhhhhhhcCCeeEe-ecc
Q 019888 157 WMLTRTTWDELSPKWP--KAY-WDDWLRLKENHKGRQFIR-PEV 196 (334)
Q Consensus 157 W~~~r~~W~el~~~wp--~~~-Wd~wlr~~~~rk~r~cI~-P~i 196 (334)
-+..++..+++.. |+ ... -|..+-....++|..+.+ |+.
T Consensus 77 ~~~r~~~l~~vg~-~~~~~~~~ED~~l~~~l~~~G~~~~~~~~~ 119 (193)
T PF13632_consen 77 MLFRREALREVGG-FDDPFSIGEDMDLGFRLRRAGYRIVYVPDA 119 (193)
T ss_pred eeeeHHHHHHhCc-ccccccccchHHHHHHHHHCCCEEEEeccc
Confidence 7888888887643 33 221 122333334667766654 554
No 80
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=58.16 E-value=13 Score=32.23 Aligned_cols=39 Identities=15% Similarity=0.222 Sum_probs=31.9
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCC
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYD 48 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~ 48 (334)
++.||- +...|+.|.+. ++|+|+.-|...-++.+++.++
T Consensus 41 v~~RPg-l~eFL~~l~~~-------yei~I~Ts~~~~yA~~il~~ld 79 (162)
T TIGR02251 41 VFKRPH-VDEFLERVSKW-------YELVIFTASLEEYADPVLDILD 79 (162)
T ss_pred EEECCC-HHHHHHHHHhc-------CEEEEEcCCcHHHHHHHHHHHC
Confidence 467998 58899998764 3899999999888888888876
No 81
>PF09258 Glyco_transf_64: Glycosyl transferase family 64 domain; InterPro: IPR015338 Members of this entry catalyse the transfer reaction of N-acetylglucosamine and N-acetylgalactosamine from the respective UDP-sugars to the non-reducing end of [glucuronic acid]beta 1-3[galactose]beta 1-O-naphthalenemethanol, an acceptor substrate analogue of the natural common linker of various glycosylaminoglycans. They are also required for the biosynthesis of heparan-sulphate []. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0031227 intrinsic to endoplasmic reticulum membrane; PDB: 1ON6_B 1OMZ_B 1OMX_B 1ON8_B.
Probab=57.93 E-value=39 Score=31.61 Aligned_cols=97 Identities=16% Similarity=0.187 Sum_probs=50.5
Q ss_pred ccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCcceEEeccCCCCCCCCCCchhHHHHHHHHHHHH
Q 019888 3 CNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKLTYMQHLDFEPVHADNPGELTAYYKIARHYKWA 82 (334)
Q Consensus 3 ~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk~a 82 (334)
++|++.|.+.|..|.+... -.+ -|+|-.+ +.+.... .+....-..|+....+.| .
T Consensus 9 ~~R~~~L~~~l~~l~~~~~--l~~-IvVvWn~-~~~~P~~-~~~~~~~vpV~~~~~~~n--------------------s 63 (247)
T PF09258_consen 9 YKRSDLLKRLLRHLASSPS--LRK-IVVVWNN-PNPPPPS-SKWPSTGVPVRVVRSSRN--------------------S 63 (247)
T ss_dssp SS-HHHHHHHHHHHTTSTT--EEE-EEEEEE--TS--THH-HHHT---S-EEEEEESSH--------------------H
T ss_pred ccchHHHHHHHHHHHcCCC--CCe-EEEEeCC-CCCCCcc-cccCCCCceEEEEecCCc--------------------c
Confidence 8999999999999977653 233 3444455 3322111 111111122222211221 2
Q ss_pred HHHHhh---hcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEE
Q 019888 83 LDNLFY---KHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIM 126 (334)
Q Consensus 83 l~~vF~---~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~ 126 (334)
|+.-|. ...-+.|+.++||..++++=++|.=++-. +.-.+|.
T Consensus 64 LnnRF~p~~~i~T~AVl~~DDDv~~~~~~l~faF~~W~--~~pdrlV 108 (247)
T PF09258_consen 64 LNNRFLPDPEIETDAVLSLDDDVMLSCDELEFAFQVWR--EFPDRLV 108 (247)
T ss_dssp GGGGGS--TT--SSEEEEEETTEEE-HHHHHHHHHHHC--CSTTSEE
T ss_pred HHhcCcCccccCcceEEEecCCcccCHHHHHHHHHHHH--hChhhee
Confidence 222221 22369999999999999999988777665 3344554
No 82
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=57.66 E-value=76 Score=31.00 Aligned_cols=114 Identities=16% Similarity=0.211 Sum_probs=66.4
Q ss_pred hHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHH----HHHhhCCCcceEEeccCCCCCCCCCCchhHHHHHHHHHHH
Q 019888 6 ANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVK----SKALSYDKLTYMQHLDFEPVHADNPGELTAYYKIARHYKW 81 (334)
Q Consensus 6 p~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr----~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk~ 81 (334)
..++.-++.||+.+.+ ...+.++|..|+-.++-. ++++.++.-..+..++.+.. .+.+.. .....+.-||.
T Consensus 37 ~~~~~vsi~Sil~nn~--~~~~~f~Il~~~is~e~~~~l~~l~~~~~~~i~~~~id~~~~-~~~~~~--~~~s~atY~Rl 111 (334)
T PRK15171 37 LFGCGVSIASVLLNNP--DKSLVFHVFTDYISDADKQRFSALAKQYNTRINIYLINCERL-KSLPST--KNWTYATYFRF 111 (334)
T ss_pred HHHHHHHHHHHHHhCC--CCCEEEEEEeCCCCHHHHHHHHHHHHhcCCeEEEEEeCHHHH-hCCccc--CcCCHHHHHHH
Confidence 4567889999998753 246789999998765544 44455542112222221110 011100 01124444566
Q ss_pred HHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEe
Q 019888 82 ALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVS 129 (334)
Q Consensus 82 al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~IS 129 (334)
.+..+|.. .+++||.|+-|+++--|.=+.++.- + .+..+.++.
T Consensus 112 ~ip~llp~-~~dkvLYLD~Diiv~~dl~~L~~~d---l-~~~~~aav~ 154 (334)
T PRK15171 112 IIADYFID-KTDKVLYLDADIACKGSIKELIDLD---F-AENEIAAVV 154 (334)
T ss_pred HHHHhhhh-hcCEEEEeeCCEEecCCHHHHHhcc---C-CCCeEEEEE
Confidence 77778742 3899999999999988877666441 1 234566664
No 83
>PLN02718 Probable galacturonosyltransferase
Probab=52.72 E-value=57 Score=34.63 Aligned_cols=100 Identities=14% Similarity=0.210 Sum_probs=59.0
Q ss_pred HHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCc--ceE--EeccCCC-CC-------CCCCCchhHHHHHHHH
Q 019888 11 RTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKL--TYM--QHLDFEP-VH-------ADNPGELTAYYKIARH 78 (334)
Q Consensus 11 r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~--~~i--~~~~~~~-~~-------~~~~~~~~~y~~ia~H 78 (334)
-++.|+..+.. ++..+.++|..|+-..+..+........ +.| ..++.-. .. ...+..-..|..++.|
T Consensus 328 VvInSil~Ns~-np~~ivFHVvTD~is~~~mk~wf~l~~~~~a~I~V~~Iddf~~lp~~~~~~lk~l~s~~~~~~S~~~y 406 (603)
T PLN02718 328 VVVNSTISSSK-EPEKIVFHVVTDSLNYPAISMWFLLNPPGKATIQILNIDDMNVLPADYNSLLMKQNSHDPRYISALNH 406 (603)
T ss_pred EEhhhhhhccC-CCCcEEEEEEeCCCCHHHHHHHHHhCCCCCcEEEEEecchhccccccchhhhhhccccccccccHHHH
Confidence 35778877632 2357888999999766554433222211 122 2222100 00 0000011135568889
Q ss_pred HHHHHHHHhhhcCccEEEEEccCceeChhHHHHHH
Q 019888 79 YKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFE 113 (334)
Q Consensus 79 yk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~ 113 (334)
+|.-|-.+|.. .++||.|++|+++--|--+-++
T Consensus 407 ~Rl~ipellp~--l~KvLYLD~DvVV~~DL~eL~~ 439 (603)
T PLN02718 407 ARFYLPDIFPG--LNKIVLFDHDVVVQRDLSRLWS 439 (603)
T ss_pred HHHHHHHHhcc--cCEEEEEECCEEecCCHHHHhc
Confidence 99999999975 8999999999999877554443
No 84
>COG1213 Predicted sugar nucleotidyltransferases [Cell envelope biogenesis, outer membrane]
Probab=51.34 E-value=1.4e+02 Score=28.03 Aligned_cols=100 Identities=18% Similarity=0.205 Sum_probs=63.0
Q ss_pred HHHHHHHHHhcCCCCCCCccEEEEeCCCCH-HHHHHHhhCC-CcceEEeccCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 019888 9 LERTINSVFKYQGSVASKYPLFVSQDGSNP-QVKSKALSYD-KLTYMQHLDFEPVHADNPGELTAYYKIARHYKWALDNL 86 (334)
Q Consensus 9 l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~-evr~vi~~~~-~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk~al~~v 86 (334)
+.|++++|.++.-. +++|..-|-.. -+.+.+..+. ...-+.+...+.-+++ -++-- |.+.+
T Consensus 34 i~~~i~~L~~~gi~-----e~vvV~~g~~~~lve~~l~~~~~~~~iv~N~~y~ktN~~--~Sl~~----------akd~~ 96 (239)
T COG1213 34 IYRTIENLAKAGIT-----EFVVVTNGYRADLVEEFLKKYPFNAKIVINSDYEKTNTG--YSLLL----------AKDYM 96 (239)
T ss_pred HHHHHHHHHHcCCc-----eEEEEeccchHHHHHHHHhcCCcceEEEeCCCcccCCce--eEEee----------ehhhh
Confidence 67899999998632 56776667654 4667777776 3333333332221111 12111 33333
Q ss_pred hhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCCCCCC
Q 019888 87 FYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSWNDNG 135 (334)
Q Consensus 87 F~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~ndng 135 (334)
-+.+|++.-|.+..|+|++.+-. ...+.+.++..+-..+
T Consensus 97 -----~~~fii~~sD~vye~~~~e~l~~-----a~~~~li~d~~~~~~~ 135 (239)
T COG1213 97 -----DGRFILVMSDHVYEPSILERLLE-----APGEGLIVDRRPRYVG 135 (239)
T ss_pred -----cCcEEEEeCCEeecHHHHHHHHh-----CcCCcEEEeccccccc
Confidence 35699999999999999998877 3478888888765443
No 85
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=50.59 E-value=69 Score=30.88 Aligned_cols=106 Identities=13% Similarity=0.046 Sum_probs=59.2
Q ss_pred cchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCH---HHHHHHhhCCCcceEEeccCCCCCCCCCCchhHHHHHHHHHH
Q 019888 4 NRANYLERTINSVFKYQGSVASKYPLFVSQDGSNP---QVKSKALSYDKLTYMQHLDFEPVHADNPGELTAYYKIARHYK 80 (334)
Q Consensus 4 NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~---evr~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk 80 (334)
-||..-.|++..+..+.--.++...-+|..||..- +.+.+|..+--+.++..-..++ + +.-++--+
T Consensus 15 e~p~~~~R~f~~~~~~k~fts~~~~~vi~~~~~~~~d~~i~~~i~~~~~~~yl~~~s~~~--------F---~s~~~c~n 83 (346)
T COG4092 15 ELPLTDSRQFSRTSAVKVFTSSDITMVICLRAHEVMDRLIRSYIDPMPRVLYLDFGSPEP--------F---ASETICAN 83 (346)
T ss_pred ccchhHHHHHhhHhhhhhccccccEEEEEEecchhHHHHHHHHhccccceEEEecCCCcc--------c---cchhhhhh
Confidence 36777788888333222112344456667788743 3333443332222222111111 0 00111223
Q ss_pred HHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhc
Q 019888 81 WALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLD 120 (334)
Q Consensus 81 ~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~ 120 (334)
-|.+..+++...+.+.+|+=||..|-|=|.=|.......+
T Consensus 84 ~ga~Ysh~~~~Sn~vlFlDvDc~~S~dnF~k~l~~~~ikk 123 (346)
T COG4092 84 NGADYSHEKCESNLVLFLDVDCFGSSDNFAKMLSIATIKK 123 (346)
T ss_pred ccchhhhccccccEEEEEeccccccHHHHHHHHHHHHHHH
Confidence 3778888877789999999999999888877776555544
No 86
>KOG4179 consensus Lysyl hydrolase/glycosyltransferase family 25 [Posttranslational modification, protein turnover, chaperones]
Probab=47.85 E-value=1.1e+02 Score=31.33 Aligned_cols=106 Identities=17% Similarity=0.218 Sum_probs=62.4
Q ss_pred cchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHh-hCCCcceEEeccCCCCC-CCCCCchhHHHHHHHHHHH
Q 019888 4 NRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKAL-SYDKLTYMQHLDFEPVH-ADNPGELTAYYKIARHYKW 81 (334)
Q Consensus 4 NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~-~~~~~~~i~~~~~~~~~-~~~~~~~~~y~~ia~Hyk~ 81 (334)
.|||-..|++..+-..- -+..++=+.||.--.+.++-. .++-+-..+.+..+... .|--|-+ -.||+=
T Consensus 301 RR~eRreRM~r~fde~g----Ie~~~veAvDgk~lnt~~~~~lgv~~LpGY~DPys~Rplt~GEiGCF------LSHY~i 370 (568)
T KOG4179|consen 301 RRPERRERMLRIFDELG----IEYSLVEAVDGKKLNTSQLEALGVQMLPGYRDPYSGRPLTKGEIGCF------LSHYNI 370 (568)
T ss_pred cChHHHHHHHHHHHHhc----ceEEEEecccccccchhHHHhcCceecCCccCcccCCcccCcceeee------hhHHHH
Confidence 48999999988887654 345788888997544444322 22212222222211110 1111112 235541
Q ss_pred HHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcC
Q 019888 82 ALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDK 121 (334)
Q Consensus 82 al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~ 121 (334)
-..|.++ +.++|+|+|||+-..++|..-...+++-.++
T Consensus 371 -W~evV~r-~l~kvlvfEDD~RFe~~f~~rl~~lm~d~~~ 408 (568)
T KOG4179|consen 371 -WKEVVDR-GLEKVLVFEDDLRFEHDFRTRLMRLMQDVDA 408 (568)
T ss_pred -HHHHHHh-ccceEEEecccccccHHHHHHHHHHHHHHHh
Confidence 1234433 6899999999999999999888887766554
No 87
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=46.31 E-value=1.6e+02 Score=27.00 Aligned_cols=95 Identities=14% Similarity=0.066 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHhcCCCCCCCccEEEEeCC-CCHHHHHHHhhCCC-cceEEeccCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 019888 7 NYLERTINSVFKYQGSVASKYPLFVSQDG-SNPQVKSKALSYDK-LTYMQHLDFEPVHADNPGELTAYYKIARHYKWALD 84 (334)
Q Consensus 7 ~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg-~~~evr~vi~~~~~-~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk~al~ 84 (334)
..+.-++.||+++.+ ..+++|..+. -.++.++.+++.+. +..+..+..... ...... . .-.+..+|.
T Consensus 14 ~~a~vl~~SL~~~~~----~~~~~vl~~~~is~~~~~~L~~~~~~~~~v~~i~~~~~-~~~~~~--~-~~~~~~~kl--- 82 (240)
T cd02537 14 PGALVLGYSLRKVGS----SYDLVVLVTPGVSEESREALEEVGWIVREVEPIDPPDS-ANLLKR--P-RFKDTYTKL--- 82 (240)
T ss_pred HHHHHHHHHHHhcCC----CCCEEEEECCCCCHHHHHHHHHcCCEEEecCccCCcch-hhhccc--h-HHHHHhHHH---
Confidence 356678888888753 3466666654 56777777777652 222222111100 000000 1 112222332
Q ss_pred HHhhhcCccEEEEEccCceeChhHHHHH
Q 019888 85 NLFYKHNFSRVIILEDDMEIAPDFFDYF 112 (334)
Q Consensus 85 ~vF~~~~~~~vIiLEDDl~~sPdFf~y~ 112 (334)
.+|+..++++||.|+-|+++-.+-=+.|
T Consensus 83 ~~~~l~~~drvlylD~D~~v~~~i~~Lf 110 (240)
T cd02537 83 RLWNLTEYDKVVFLDADTLVLRNIDELF 110 (240)
T ss_pred HhccccccceEEEEeCCeeEccCHHHHh
Confidence 2333335999999999999987744433
No 88
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=44.00 E-value=2e+02 Score=27.44 Aligned_cols=116 Identities=14% Similarity=0.223 Sum_probs=66.6
Q ss_pred hHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHH-HHHhhCCC-cceEEeccCC--CCCCC-CCCchhHHHHHHHHHH
Q 019888 6 ANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVK-SKALSYDK-LTYMQHLDFE--PVHAD-NPGELTAYYKIARHYK 80 (334)
Q Consensus 6 p~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr-~vi~~~~~-~~~i~~~~~~--~~~~~-~~~~~~~y~~ia~Hyk 80 (334)
...+..++.||+.+. ...+.++|..|+-.++.. .+.+.... -+.|.-...+ ..... .+.. .|......+|
T Consensus 13 ~~~~~~~i~Sil~n~---~~~~~fhii~d~~s~~~~~~l~~~~~~~~~~i~f~~i~~~~~~~~~~~~~--~~s~~y~y~R 87 (280)
T cd06431 13 SRDVVTLVKSVLFYR---RNPLHFHLITDEIARRILATLFQTWMVPAVEVSFYNAEELKSRVSWIPNK--HYSGIYGLMK 87 (280)
T ss_pred HHHHHHHHHHHHHcC---CCCEEEEEEECCcCHHHHHHHHHhccccCcEEEEEEhHHhhhhhccCccc--chhhHHHHHH
Confidence 566789999999985 356889999998766553 34333221 1223221111 00000 1111 2222225567
Q ss_pred HHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEe
Q 019888 81 WALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVS 129 (334)
Q Consensus 81 ~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~IS 129 (334)
..+-.+|.. .+++||.|+-|+++--|--+-++...+ -.+..++++.
T Consensus 88 L~ip~llp~-~~dkvLYLD~Diiv~~di~eL~~~~~~--~~~~~~~a~v 133 (280)
T cd06431 88 LVLTEALPS-DLEKVIVLDTDITFATDIAELWKIFHK--FTGQQVLGLV 133 (280)
T ss_pred HHHHHhchh-hcCEEEEEcCCEEEcCCHHHHHHHhhh--cCCCcEEEEe
Confidence 788888852 389999999999998776555544111 1244566664
No 89
>cd02523 PC_cytidylyltransferase Phosphocholine cytidylyltransferases catalyze the synthesis of CDP-choline. This family contains proteins similar to prokaryotic phosphocholine (P-cho) cytidylyltransferases. Phosphocholine (PC) cytidylyltransferases catalyze the transfer of a cytidine monophosphate from CTP to phosphocholine to form CDP-choline. PC is the most abundant phospholipid in eukaryotic membranes and it is also important in prokaryotic membranes. For pathogenic prokaryotes, the cell surface PC facilitates the interaction with host surface and induces attachment and invasion. In addition cell wall PC serves as scaffold for a group of choline-binding proteins that are secreted from the cells. Phosphocholine (PC) cytidylyltransferase is a key enzyme in the prokaryotic choline metabolism pathway. It has been hypothesized to consist of a choline transport system, a choline kinase, CTP:phosphocholine cytidylyltransferase, and a choline phosphotransferase that transfers P-Cho from CDP
Probab=40.62 E-value=2.3e+02 Score=25.11 Aligned_cols=84 Identities=19% Similarity=0.300 Sum_probs=45.2
Q ss_pred HHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCcceEEeccCCCCCCCCCCchhHHHHHHHHHHHHHHHHhh
Q 019888 9 LERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKLTYMQHLDFEPVHADNPGELTAYYKIARHYKWALDNLFY 88 (334)
Q Consensus 9 l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk~al~~vF~ 88 (334)
+.++|++|.++. .+ +|+|......+++.+.+.+...+..+.....++ .|...++. .|+..+
T Consensus 32 i~~~l~~l~~~g---i~--~i~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~s~~----------~~~~~~-- 92 (229)
T cd02523 32 LERQIETLKEAG---ID--DIVIVTGYKKEQIEELLKKYPNIKFVYNPDYAE--TNNIYSLY----------LARDFL-- 92 (229)
T ss_pred HHHHHHHHHHCC---Cc--eEEEEeccCHHHHHHHHhccCCeEEEeCcchhh--hCcHHHHH----------HHHHHc--
Confidence 678889888863 23 345544444456666665532222222211111 22211211 144333
Q ss_pred hcCccEEEEEccCceeChhHHHHHHH
Q 019888 89 KHNFSRVIILEDDMEIAPDFFDYFEA 114 (334)
Q Consensus 89 ~~~~~~vIiLEDDl~~sPdFf~y~~~ 114 (334)
.+.++|+.-|+...++.++.+.+
T Consensus 93 ---~~~~lv~~~D~~~~~~~~~~~~~ 115 (229)
T cd02523 93 ---DEDFLLLEGDVVFDPSILERLLS 115 (229)
T ss_pred ---CCCEEEEeCCEecCHHHHHHHHc
Confidence 26799999999999987776654
No 90
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=39.75 E-value=1e+02 Score=29.03 Aligned_cols=41 Identities=27% Similarity=0.555 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHhhhcCccEEEEEccCceeChhHHHHHHH
Q 019888 72 YYKIARHYKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEA 114 (334)
Q Consensus 72 y~~ia~Hyk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~ 114 (334)
+...+.++|.-+-.++.. .+++|.|+.|+++--|-=+-++.
T Consensus 96 ~~s~~~y~Rl~ip~llp~--~~kvlYLD~Dviv~~dl~eL~~~ 136 (257)
T cd06429 96 YISLLNFARFYLPELFPK--LEKVIYLDDDVVVQKDLTELWNT 136 (257)
T ss_pred ccCHHHHHHHHHHHHhhh--hCeEEEEeCCEEEeCCHHHHhhC
Confidence 345678889999999874 89999999999998876555543
No 91
>PLN02458 transferase, transferring glycosyl groups
Probab=39.19 E-value=3.7e+02 Score=26.64 Aligned_cols=101 Identities=17% Similarity=0.126 Sum_probs=64.2
Q ss_pred ccc-ch---HHHHHHHHHHHhcCCCCCCCccEEEEeCCC-CHHHHHHHhhCCCcceEEeccCCCCCCCCCCchhHHHHHH
Q 019888 2 ACN-RA---NYLERTINSVFKYQGSVASKYPLFVSQDGS-NPQVKSKALSYDKLTYMQHLDFEPVHADNPGELTAYYKIA 76 (334)
Q Consensus 2 a~N-Rp---~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~-~~evr~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia 76 (334)
||. || -+|-|+-..|+...|+ ..=||.-|+. ..+|+++++.-+ +.+.+ +....+.... .. +..
T Consensus 120 TY~rR~~Q~a~LTRLahTL~lVp~p----L~WIVVEd~~~t~~va~lLrrsG-l~y~H-L~~k~~~~~~-~~-----r~~ 187 (346)
T PLN02458 120 ISTKDRYQGVLLRRLANTLRLVPPP----LLWIVVEGQSDSEEVSEMLRKTG-IMYRH-LVFKENFTDP-EA-----ELD 187 (346)
T ss_pred CCCCcchhHHHHHHHHHHHhcCCCC----ceEEEEeCCCCCHHHHHHHHHcC-CceEE-eccCCCCCCc-cc-----hhH
Confidence 465 43 4588999999988743 2445555654 568999998865 55433 3222222111 11 223
Q ss_pred HHHHHHHHHHhhhcCccEEEEEccCceeChhHHHHHHH
Q 019888 77 RHYKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEA 114 (334)
Q Consensus 77 ~Hyk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~ 114 (334)
+-.+.||.++=+....+-|.|-+||..-+-++|+-|.+
T Consensus 188 ~QRN~AL~~IR~h~l~GVVyFADDdNtYsl~LFeEmR~ 225 (346)
T PLN02458 188 HQRNLALRHIEHHKLSGIVHFAGLSNVYDLDFFDEIRD 225 (346)
T ss_pred HHHHHHHHHHHhcCcCceEEEccCCCcccHHHHHHHhc
Confidence 44567999997654467788999999999888876554
No 92
>PLN02867 Probable galacturonosyltransferase
Probab=37.59 E-value=41 Score=35.19 Aligned_cols=53 Identities=21% Similarity=0.372 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEe
Q 019888 71 AYYKIARHYKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVS 129 (334)
Q Consensus 71 ~y~~ia~Hyk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~IS 129 (334)
.|..+..|+|..|-++|.. .++||.||+|+++--|.=+-++- =-.+.-+.+|.
T Consensus 326 kylS~lnYlRflIPeLLP~--LdKVLYLD~DVVVqgDLseLwdi----DL~gkviaAV~ 378 (535)
T PLN02867 326 SCLSLLNHLRIYIPELFPD--LNKIVFLDDDVVVQHDLSSLWEL----DLNGKVVGAVV 378 (535)
T ss_pred hhhhHHHHHHHHHHHHhhc--cCeEEEecCCEEEcCchHHHHhC----cCCCCeEEEEe
Confidence 5778999999999999985 89999999999998875443332 11344456664
No 93
>PF00483 NTP_transferase: Nucleotidyl transferase This Prosite entry is only a sub-family of the Pfam entry.; InterPro: IPR005835 Nucleotidyl transferases transfer nucleotides from one compound to another. This domain is found in a number of enzymes that transfer nucleotides onto phosphosugars.; GO: 0016779 nucleotidyltransferase activity, 0009058 biosynthetic process; PDB: 1YP2_C 1YP4_D 1YP3_B 1H5S_D 1H5R_C 1H5T_C 2E3D_B 1JYL_C 1JYK_A 1MP5_C ....
Probab=36.66 E-value=2e+02 Score=25.73 Aligned_cols=92 Identities=13% Similarity=0.097 Sum_probs=52.9
Q ss_pred HHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCcc-eEEeccCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 019888 8 YLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKLT-YMQHLDFEPVHADNPGELTAYYKIARHYKWALDNL 86 (334)
Q Consensus 8 ~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~~-~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk~al~~v 86 (334)
-+..+|+.|.++.. +++ ++|......+.+.+.+++..... .+.....+. ..|.++ ||..+
T Consensus 33 li~~~l~~l~~~g~---~~i-i~V~~~~~~~~i~~~~~~~~~~~~~i~~i~~~~-~~Gta~--------------al~~a 93 (248)
T PF00483_consen 33 LIDYVLENLANAGI---KEI-IVVVNGYKEEQIEEHLGSGYKFGVKIEYIVQPE-PLGTAG--------------ALLQA 93 (248)
T ss_dssp HHHHHHHHHHHTTC---SEE-EEEEETTTHHHHHHHHTTSGGGTEEEEEEEESS-SSCHHH--------------HHHHT
T ss_pred chhhhhhhhcccCC---ceE-EEEEeecccccccccccccccccccceeeeccc-ccchhH--------------HHHHH
Confidence 47889999998653 332 55655555567878777654211 222221111 122222 44444
Q ss_pred hhhcCcc----EEEEEccCceeChhHHHHHHHHHHh
Q 019888 87 FYKHNFS----RVIILEDDMEIAPDFFDYFEAAADL 118 (334)
Q Consensus 87 F~~~~~~----~vIiLEDDl~~sPdFf~y~~~~l~~ 118 (334)
.+....+ .++|+=+|++...+|-+.++...+.
T Consensus 94 ~~~i~~~~~~~~~lv~~gD~i~~~~~~~~l~~~~~~ 129 (248)
T PF00483_consen 94 LDFIEEEDDDEDFLVLNGDIIFDDDLQDMLEFHRES 129 (248)
T ss_dssp HHHHTTSEE-SEEEEETTEEEESTTHHHHHHHHHHH
T ss_pred HHHhhhccccceEEEEeccccccchhhhHHHhhhcc
Confidence 4333333 4999999999999887777665443
No 94
>PLN02190 cellulose synthase-like protein
Probab=35.49 E-value=43 Score=36.51 Aligned_cols=32 Identities=28% Similarity=0.397 Sum_probs=28.9
Q ss_pred hHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCH
Q 019888 6 ANYLERTINSVFKYQGSVASKYPLFVSQDGSNP 38 (334)
Q Consensus 6 p~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~ 38 (334)
|..+..++-|+++..+| .++.-+|||+||...
T Consensus 109 pl~v~nTvLSilA~dYP-~eklscYvSDDG~s~ 140 (756)
T PLN02190 109 PIIVVNTVLSLLAVNYP-ANKLACYVSDDGCSP 140 (756)
T ss_pred HHHHHHHHHHHHhccCC-ccccceEEecCCCcH
Confidence 67889999999999997 799999999999965
No 95
>PLN03180 reversibly glycosylated polypeptide; Provisional
Probab=34.60 E-value=20 Score=35.34 Aligned_cols=24 Identities=17% Similarity=0.216 Sum_probs=19.9
Q ss_pred ccEEEEEccCceeChh-------HHHHHHHH
Q 019888 92 FSRVIILEDDMEIAPD-------FFDYFEAA 115 (334)
Q Consensus 92 ~~~vIiLEDDl~~sPd-------Ff~y~~~~ 115 (334)
.+++|.++|||.++.| ||.-+-.-
T Consensus 94 ~~yivsiDDD~~Pa~d~~g~~i~~~~qH~~N 124 (346)
T PLN03180 94 KKYIFTIDDDCFVAKDPSGKLINALEQHIKN 124 (346)
T ss_pred ceEEEEECCCCCCCCCCccccccHHHHHHHh
Confidence 7899999999999998 88754443
No 96
>PLN00176 galactinol synthase
Probab=34.01 E-value=1.9e+02 Score=28.51 Aligned_cols=93 Identities=16% Similarity=0.145 Sum_probs=47.6
Q ss_pred HHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCC-cceEEeccCCCCCCCCCCchhHHHHHHHHHHHHHHHHhh
Q 019888 10 ERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDK-LTYMQHLDFEPVHADNPGELTAYYKIARHYKWALDNLFY 88 (334)
Q Consensus 10 ~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~-~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk~al~~vF~ 88 (334)
.-+..||++.. .+.+.-++|..|= .++.++.+++.+. +..|..+....+...... .++.|. .-|+ .+|+
T Consensus 40 ~vL~~SLr~~~--s~~~lVvlVt~dV-p~e~r~~L~~~g~~V~~V~~i~~~~~~~~~~~---~~~~i~-~tKl---~iw~ 109 (333)
T PLN00176 40 VGLAKGLRKVK--SAYPLVVAVLPDV-PEEHRRILVSQGCIVREIEPVYPPENQTQFAM---AYYVIN-YSKL---RIWE 109 (333)
T ss_pred HHHHHHHHHhC--CCCCEEEEECCCC-CHHHHHHHHHcCCEEEEecccCCccccccccc---chhhhh-hhhh---hhcc
Confidence 44567887765 2444455555554 4567777777654 333333221111101100 111111 0011 2344
Q ss_pred hcCccEEEEEccCceeChhHHHHH
Q 019888 89 KHNFSRVIILEDDMEIAPDFFDYF 112 (334)
Q Consensus 89 ~~~~~~vIiLEDDl~~sPdFf~y~ 112 (334)
...|+++|.|+-|+++--+.=+-|
T Consensus 110 l~~ydkvlyLDaD~lv~~nid~Lf 133 (333)
T PLN00176 110 FVEYSKMIYLDGDIQVFENIDHLF 133 (333)
T ss_pred ccccceEEEecCCEEeecChHHHh
Confidence 335999999999999976655444
No 97
>PF07573 AreA_N: Nitrogen regulatory protein AreA N terminus; InterPro: IPR011420 The AreA nitrogen regulatory proteins (which are GATA type transcription factors) share a highly conserved N terminus and have IPR000679 from INTERPRO at the C terminus.; GO: 0003677 DNA binding, 0008270 zinc ion binding, 0042128 nitrate assimilation, 0005634 nucleus
Probab=33.78 E-value=21 Score=27.84 Aligned_cols=16 Identities=38% Similarity=1.043 Sum_probs=13.3
Q ss_pred CccccCCCCCCCcCce
Q 019888 290 GIFNEWKDGIPRTAYK 305 (334)
Q Consensus 290 ~~~~~~~~g~~R~~y~ 305 (334)
.|+.+|+.|.||++..
T Consensus 69 slFPEW~~gaPR~gvd 84 (88)
T PF07573_consen 69 SLFPEWRNGAPRPGVD 84 (88)
T ss_pred ccccccccCCCCCCCC
Confidence 4899999999998543
No 98
>PLN02523 galacturonosyltransferase
Probab=31.77 E-value=54 Score=34.49 Aligned_cols=40 Identities=23% Similarity=0.593 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHHhhhcCccEEEEEccCceeChhHHHHH
Q 019888 71 AYYKIARHYKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYF 112 (334)
Q Consensus 71 ~y~~ia~Hyk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~ 112 (334)
.|..++.|++.-|-.+|.+ .++||.||+|+++--|-=+-+
T Consensus 358 ~ylS~~ny~Rf~IPeLLP~--ldKVLYLD~DVVVq~DLseLw 397 (559)
T PLN02523 358 KYLSMLNHLRFYLPEMYPK--LHRILFLDDDVVVQKDLTGLW 397 (559)
T ss_pred chhhHHHHHHHHHHHHhcc--cCeEEEEeCCEEecCCHHHHH
Confidence 5678899999999999985 899999999999987754433
No 99
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=31.31 E-value=1.5e+02 Score=28.90 Aligned_cols=82 Identities=15% Similarity=0.212 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHhcCCC-CCCCccEEEEeCCCCHHHHHHHhhCC---CcceEEeccCCCCCCCCCCchhHHHHHHHHHHHH
Q 019888 7 NYLERTINSVFKYQGS-VASKYPLFVSQDGSNPQVKSKALSYD---KLTYMQHLDFEPVHADNPGELTAYYKIARHYKWA 82 (334)
Q Consensus 7 ~~l~r~L~sL~~~~~~-~~~~~~l~Is~Dg~~~evr~vi~~~~---~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk~a 82 (334)
..+..+++.|.+-... ..-.+.++|++||+..+|.+++-.|. +.-.++......|+ |..+.+.. |
T Consensus 84 ~mldeav~~le~ry~~~~~F~~eiiVvddgs~d~T~~~a~k~s~K~~~d~irV~~l~~nr-gKGgAvR~----------g 152 (323)
T KOG2977|consen 84 AMLDEAVDYLEKRYLSDKSFTYEIIVVDDGSTDSTVEVALKFSRKLGDDNIRVIKLKKNR-GKGGAVRK----------G 152 (323)
T ss_pred HHHHHHHHHHHHHhccCCCCceeEEEeCCCCchhHHHHHHHHHHHcCcceEEEeehhccC-CCCcceeh----------h
Confidence 3456677777764422 12467999999999988888776553 12334444444443 44333321 2
Q ss_pred HHHHhhhcCccEEEEEccCce
Q 019888 83 LDNLFYKHNFSRVIILEDDME 103 (334)
Q Consensus 83 l~~vF~~~~~~~vIiLEDDl~ 103 (334)
+... ..+.+++.+-|--
T Consensus 153 ~l~~----rG~~ilfadAdGa 169 (323)
T KOG2977|consen 153 MLSS----RGQKILFADADGA 169 (323)
T ss_pred hHhc----cCceEEEEcCCCC
Confidence 2111 2567788877753
No 100
>PLN02659 Probable galacturonosyltransferase
Probab=31.23 E-value=46 Score=34.79 Aligned_cols=41 Identities=24% Similarity=0.559 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcCccEEEEEccCceeChhHHHHHH
Q 019888 71 AYYKIARHYKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFE 113 (334)
Q Consensus 71 ~y~~ia~Hyk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~ 113 (334)
.|..+..|+|.-|-.+|.. .++||.||+|+++--|-=+-++
T Consensus 325 ~ylS~~nY~RL~IPeLLP~--LdKVLYLD~DVVVqgDLseLw~ 365 (534)
T PLN02659 325 KYNSVMNHIRIHLPELFPS--LNKVVFLDDDIVVQTDLSPLWD 365 (534)
T ss_pred cceeHHHHHHHHHHHHhhh--cCeEEEeeCCEEEcCchHHHHh
Confidence 5678999999999999985 8999999999999877554443
No 101
>KOG2792 consensus Putative cytochrome C oxidase assembly protein [Energy production and conversion]
Probab=30.09 E-value=1.5e+02 Score=28.44 Aligned_cols=41 Identities=22% Similarity=0.342 Sum_probs=25.6
Q ss_pred hHHHHHH---HHHHHhcCCCCCCCccEEEEeCCC---CHHHHHHHhhCC
Q 019888 6 ANYLERT---INSVFKYQGSVASKYPLFVSQDGS---NPQVKSKALSYD 48 (334)
Q Consensus 6 p~~l~r~---L~sL~~~~~~~~~~~~l~Is~Dg~---~~evr~vi~~~~ 48 (334)
||-|.++ ++.|.+..+ ....||+|+.|-. .+.+.++++.|.
T Consensus 156 PdELeKm~~~Vd~i~~~~~--~~~~PlFIsvDPeRD~~~~~~eY~~eF~ 202 (280)
T KOG2792|consen 156 PDELEKMSAVVDEIEAKPG--LPPVPLFISVDPERDSVEVVAEYVSEFH 202 (280)
T ss_pred hHHHHHHHHHHHHHhccCC--CCccceEEEeCcccCCHHHHHHHHHhcC
Confidence 4555544 455555443 3444899999995 456667777764
No 102
>cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.
Probab=29.51 E-value=3.9e+02 Score=23.48 Aligned_cols=89 Identities=10% Similarity=0.030 Sum_probs=48.8
Q ss_pred HHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCcceEEeccCCCCCCCCCCchhHHHHHHHHHHHHHHHHh
Q 019888 8 YLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKLTYMQHLDFEPVHADNPGELTAYYKIARHYKWALDNLF 87 (334)
Q Consensus 8 ~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk~al~~vF 87 (334)
-+.++|++|.++-- . .|+|......+++.+.+..-.+-..+..........|..+++. .|+..+
T Consensus 32 li~~~l~~l~~~gi---~--~i~iv~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~g~~~~l~----------~~~~~~- 95 (221)
T cd06422 32 LIDHALDRLAAAGI---R--RIVVNTHHLADQIEAHLGDSRFGLRITISDEPDELLETGGGIK----------KALPLL- 95 (221)
T ss_pred HHHHHHHHHHHCCC---C--EEEEEccCCHHHHHHHHhcccCCceEEEecCCCcccccHHHHH----------HHHHhc-
Confidence 36788999988642 2 4666555555666666654112112222111101122222211 133332
Q ss_pred hhcCccEEEEEccCceeChhHHHHHHHH
Q 019888 88 YKHNFSRVIILEDDMEIAPDFFDYFEAA 115 (334)
Q Consensus 88 ~~~~~~~vIiLEDDl~~sPdFf~y~~~~ 115 (334)
+.+.++|+--|++...||...+...
T Consensus 96 ---~~~~~lv~~~D~i~~~~~~~~~~~~ 120 (221)
T cd06422 96 ---GDEPFLVVNGDILWDGDLAPLLLLH 120 (221)
T ss_pred ---CCCCEEEEeCCeeeCCCHHHHHHHH
Confidence 2368999999999999988877754
No 103
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=28.07 E-value=4.1e+02 Score=26.05 Aligned_cols=101 Identities=19% Similarity=0.316 Sum_probs=61.7
Q ss_pred HHHHHHHHHHhcCCCCCCCccEEEEeCCCCHH----HHHHHhhCCCcceEEeccCCCCCCCCCCchhHHHHHHHHHHHHH
Q 019888 8 YLERTINSVFKYQGSVASKYPLFVSQDGSNPQ----VKSKALSYDKLTYMQHLDFEPVHADNPGELTAYYKIARHYKWAL 83 (334)
Q Consensus 8 ~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~e----vr~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk~al 83 (334)
.+.-++.||+.+.. ...+.++|..||-.+| .++.++.|+.+..+..++.++-. ..+.....|. -+-=+|.-+
T Consensus 16 ~~gvsI~SiL~~n~--~~~~~fhil~~~i~~e~~~~l~~~~~~f~~~i~~~~id~~~~~-~~~~~~~~~s-~~v~~R~fi 91 (325)
T COG1442 16 PAGVSIYSLLEHNR--KIFYKFHILVDGLNEEDKKKLNETAEPFKSFIVLEVIDIEPFL-DYPPFTKRFS-KMVLVRYFL 91 (325)
T ss_pred hHHHHHHHHHHhCc--cccEEEEEEecCCCHHHHHHHHHHHHhhccceeeEEEechhhh-cccccccchH-HHHHHHHHH
Confidence 45678889998763 2478899999998665 55677777753333333322211 1110111111 234456667
Q ss_pred HHHhhhcCccEEEEEccCceeChhHHHHHHH
Q 019888 84 DNLFYKHNFSRVIILEDDMEIAPDFFDYFEA 114 (334)
Q Consensus 84 ~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~ 114 (334)
..+|.+ ++++|-++=|.++--|+=+-|.-
T Consensus 92 adlf~~--~dK~lylD~Dvi~~g~l~~lf~~ 120 (325)
T COG1442 92 ADLFPQ--YDKMLYLDVDVIFCGDLSELFFI 120 (325)
T ss_pred HHhccc--cCeEEEEecCEEEcCcHHHHHhc
Confidence 778876 79999999999987766444333
No 104
>cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars. Nucleotidyltransferases transfer nucleotides onto phosphosugars. The enzyme family includes Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase. The products are activated sugars that are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides.
Probab=27.82 E-value=3.6e+02 Score=23.32 Aligned_cols=90 Identities=12% Similarity=0.052 Sum_probs=48.9
Q ss_pred cchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCC-CcceEEeccCCCCCCCCCCchhHHHHHHHHHHHH
Q 019888 4 NRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYD-KLTYMQHLDFEPVHADNPGELTAYYKIARHYKWA 82 (334)
Q Consensus 4 NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~-~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk~a 82 (334)
+||= +..+|++|.++.- + +++|......+++++.+.+.. +-..+.....+. ..|...++.. |
T Consensus 28 g~pl-i~~~l~~l~~~g~---~--~i~vv~~~~~~~i~~~~~~~~~~~~~i~~~~~~~-~~g~~~al~~----------~ 90 (217)
T cd04181 28 GKPI-LEYIIERLARAGI---D--EIILVVGYLGEQIEEYFGDGSKFGVNIEYVVQEE-PLGTAGAVRN----------A 90 (217)
T ss_pred CeeH-HHHHHHHHHHCCC---C--EEEEEeccCHHHHHHHHcChhhcCceEEEEeCCC-CCccHHHHHH----------h
Confidence 4543 6778888887631 2 456655545556666665421 111222211111 1222222211 4
Q ss_pred HHHHhhhcCccEEEEEccCceeChhHHHHHHH
Q 019888 83 LDNLFYKHNFSRVIILEDDMEIAPDFFDYFEA 114 (334)
Q Consensus 83 l~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~ 114 (334)
+..+ +.+.++|+--|++..+|+...++.
T Consensus 91 ~~~~----~~~~~lv~~~D~~~~~~~~~~~~~ 118 (217)
T cd04181 91 EDFL----GDDDFLVVNGDVLTDLDLSELLRF 118 (217)
T ss_pred hhhc----CCCCEEEEECCeecCcCHHHHHHH
Confidence 4333 367899999999999998877643
No 105
>PLN02829 Probable galacturonosyltransferase
Probab=26.47 E-value=73 Score=33.99 Aligned_cols=40 Identities=28% Similarity=0.624 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHHhhhcCccEEEEEccCceeChhHHHHH
Q 019888 71 AYYKIARHYKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYF 112 (334)
Q Consensus 71 ~y~~ia~Hyk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~ 112 (334)
.|..++.|++.-|-.+|.. .++||.||+|+++--|-=+.+
T Consensus 438 ~ylS~lnY~RfyLPeLLP~--LdKVLYLD~DVVVqgDLseLw 477 (639)
T PLN02829 438 KYLSILNHLRFYLPEIFPK--LNKVLFLDDDIVVQKDLTGLW 477 (639)
T ss_pred chhhHHHHHHHHHHHHhcc--cCeEEEEeCCEEeCCChHHHH
Confidence 4567888999999999985 899999999999987754433
No 106
>PLN02769 Probable galacturonosyltransferase
Probab=26.06 E-value=69 Score=34.23 Aligned_cols=41 Identities=24% Similarity=0.544 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHHhhhcCccEEEEEccCceeChhHHHHHH
Q 019888 71 AYYKIARHYKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFE 113 (334)
Q Consensus 71 ~y~~ia~Hyk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~ 113 (334)
.|..+..|+++-|-.+|.. .++||.|++|+++--|-=+-++
T Consensus 433 eyiS~~nh~RfyIPELLP~--LdKVLYLD~DVVVqgDLseLw~ 473 (629)
T PLN02769 433 EYLSVFSHSHFLLPEIFKK--LKKVVVLDDDVVVQRDLSFLWN 473 (629)
T ss_pred ccccHHHHHHHHHHHHhhh--cCeEEEEeCCEEecCcHHHHhc
Confidence 5667899999999999975 8999999999999887655443
No 107
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=25.96 E-value=4e+02 Score=24.76 Aligned_cols=97 Identities=21% Similarity=0.211 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHH----HHHHhhCCC-cceEEecc-CCCCCCCCCCchhHHHHHHHHHH
Q 019888 7 NYLERTINSVFKYQGSVASKYPLFVSQDGSNPQV----KSKALSYDK-LTYMQHLD-FEPVHADNPGELTAYYKIARHYK 80 (334)
Q Consensus 7 ~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~ev----r~vi~~~~~-~~~i~~~~-~~~~~~~~~~~~~~y~~ia~Hyk 80 (334)
.++..+|.||+++.. ..+.++|..|+-.++- .+.++.++. +..+ ..+ ...-. ..+.. . ..+...++
T Consensus 14 ~~~~v~l~Sll~nn~---~~~~fyil~~~is~e~~~~l~~~~~~~~~~i~~i-~i~~~~~~~-~~~~~--~-~~~~~y~r 85 (248)
T cd06432 14 RFLRIMMLSVMKNTK---SPVKFWFIKNFLSPQFKEFLPEMAKEYGFEYELV-TYKWPRWLH-KQTEK--Q-RIIWGYKI 85 (248)
T ss_pred HHHHHHHHHHHHcCC---CCEEEEEEeCCCCHHHHHHHHHHHHHhCCceEEE-EecChhhhh-ccccc--c-hhHHHHHH
Confidence 357889999998752 5789999999976554 445555542 2222 111 01000 00000 0 00111222
Q ss_pred HHHHHHhhhcCccEEEEEccCceeChhHHHHH
Q 019888 81 WALDNLFYKHNFSRVIILEDDMEIAPDFFDYF 112 (334)
Q Consensus 81 ~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~ 112 (334)
..+..++.. ..++||.|+=|+++--|-=+.+
T Consensus 86 L~~~~lLP~-~vdkvLYLD~Dilv~~dL~eL~ 116 (248)
T cd06432 86 LFLDVLFPL-NVDKVIFVDADQIVRTDLKELM 116 (248)
T ss_pred HHHHHhhhh-ccCEEEEEcCCceecccHHHHH
Confidence 344545542 3799999999999876654433
No 108
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=25.95 E-value=1e+02 Score=32.34 Aligned_cols=38 Identities=16% Similarity=0.389 Sum_probs=32.8
Q ss_pred ccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCCC
Q 019888 92 FSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSWN 132 (334)
Q Consensus 92 ~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~n 132 (334)
+++++.++-|..+.||-+..|-. .+.+|++|+++||..
T Consensus 202 ~~~il~~DaDt~~~p~~~~~lv~---~m~~d~~i~gvCG~t 239 (527)
T PF03142_consen 202 YEYILMVDADTKFDPDSVNRLVD---AMERDPKIGGVCGET 239 (527)
T ss_pred eEEEEEecCCceEcHHHHHHHHH---HHcCCCCeEEEecee
Confidence 79999999999999998866555 457999999999963
No 109
>PLN02870 Probable galacturonosyltransferase
Probab=25.28 E-value=70 Score=33.47 Aligned_cols=40 Identities=28% Similarity=0.538 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHHhhhcCccEEEEEccCceeChhHHHHH
Q 019888 71 AYYKIARHYKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYF 112 (334)
Q Consensus 71 ~y~~ia~Hyk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~ 112 (334)
.|..+..|++.-|-.+|.. .++||.||+|+++--|-=+-+
T Consensus 324 ~ylS~lny~Rl~LPelLP~--LdKVLYLD~DVVVqgDLseLw 363 (533)
T PLN02870 324 KYISLLNHLRIYLPELFPN--LDKVVFLDDDVVIQRDLSPLW 363 (533)
T ss_pred cccCHHHHHHHHHHHHhhh--cCeEEEEeCCEEecCcHHHHh
Confidence 4677899999999999985 899999999999977754433
No 110
>PF06306 CgtA: Beta-1,4-N-acetylgalactosaminyltransferase (CgtA); InterPro: IPR010446 This family consists of several beta-1,4-N-acetylgalactosaminyltransferase proteins from Campylobacter jejuni [].
Probab=25.00 E-value=1.7e+02 Score=28.95 Aligned_cols=114 Identities=16% Similarity=0.161 Sum_probs=67.4
Q ss_pred cchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhC----CCcceEEeccCCCCCCCCCCchhHHHHHHHHH
Q 019888 4 NRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSY----DKLTYMQHLDFEPVHADNPGELTAYYKIARHY 79 (334)
Q Consensus 4 NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~----~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hy 79 (334)
|-...|+.+|+|++-+--. -|+.+.||.+ .|.++|..| -.+..+..+. ++..+.+.+ .+-++..-|
T Consensus 97 nE~~tl~~si~S~Lpai~~-----gVI~yNdc~D-~t~Eiil~fckkyP~fip~~Ypy--~v~~~n~~~--~~n~l~~YY 166 (347)
T PF06306_consen 97 NEAMTLAESIESILPAIDE-----GVIGYNDCTD-GTEEIILEFCKKYPSFIPIKYPY--EVIIKNPKS--EENSLYNYY 166 (347)
T ss_pred chhhhHHHHHHHHHHHHhc-----cEEEeecCCC-CHHHHHHHHHHhCcccccccCcc--hhhccCCch--hhhhhhhhh
Confidence 4457899999999987632 5788888864 345555544 3333343332 111233322 234666778
Q ss_pred HHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCCCC
Q 019888 80 KWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSWND 133 (334)
Q Consensus 80 k~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~nd 133 (334)
+++++.+- +++.+|=++.|.+--+.=+ | +..-+-+++..+.|.|-=|.
T Consensus 167 Ny~ls~ip---k~~w~iKID~DhIy~~~KL-~--ksfY~pk~~~~~v~YsRINF 214 (347)
T PF06306_consen 167 NYVLSFIP---KNEWAIKIDADHIYDTKKL-Y--KSFYIPKNDYDVVSYSRINF 214 (347)
T ss_pred hhhhcccc---cceEEEEeccceeecHHHH-h--hhheeeccccceEEecceeE
Confidence 88877664 2789999999999877654 1 11111245555666665543
No 111
>PLN02893 Cellulose synthase-like protein
Probab=24.33 E-value=77 Score=34.57 Aligned_cols=32 Identities=28% Similarity=0.363 Sum_probs=27.6
Q ss_pred hHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCH
Q 019888 6 ANYLERTINSVFKYQGSVASKYPLFVSQDGSNP 38 (334)
Q Consensus 6 p~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~ 38 (334)
|-.+-.++-|++++.+| +++..+|||+||+..
T Consensus 117 p~~~~ntvLSilA~dyp-~~kls~YvSDDGgs~ 148 (734)
T PLN02893 117 PMGVVNTALSVMAYDYP-TEKLSVYVSDDGGSK 148 (734)
T ss_pred hHHHHHHHHHHHhhccC-ccceEEEEecCCccH
Confidence 45677889999999987 899999999999964
No 112
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=22.21 E-value=3.3e+02 Score=22.13 Aligned_cols=34 Identities=12% Similarity=0.234 Sum_probs=26.2
Q ss_pred HHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCC
Q 019888 9 LERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYD 48 (334)
Q Consensus 9 l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~ 48 (334)
+..+|+.|.+.. ++++|..+++...++.+++..+
T Consensus 82 ~~~~L~~l~~~~------~~~~i~Sn~~~~~~~~~l~~~~ 115 (176)
T PF13419_consen 82 VRELLERLKAKG------IPLVIVSNGSRERIERVLERLG 115 (176)
T ss_dssp HHHHHHHHHHTT------SEEEEEESSEHHHHHHHHHHTT
T ss_pred hhhhhhhccccc------ceeEEeecCCcccccccccccc
Confidence 467778886543 3899999998888888888776
No 113
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=21.86 E-value=2.7e+02 Score=23.95 Aligned_cols=78 Identities=22% Similarity=0.232 Sum_probs=47.7
Q ss_pred ccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCcc-eE-Ee-ccCCCCCCCCCCchhHHHHHHHHH
Q 019888 3 CNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKLT-YM-QH-LDFEPVHADNPGELTAYYKIARHY 79 (334)
Q Consensus 3 ~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~~-~i-~~-~~~~~~~~~~~~~~~~y~~ia~Hy 79 (334)
.-||. +...|+.|.+. ++|.|+.-++.+-+..+++.++--. .. .. ..++. +.+...
T Consensus 58 ~~rPg-v~efL~~l~~~-------yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~rd~----~~~~~~--------- 116 (156)
T TIGR02250 58 KLRPF-LHEFLKEASKL-------YEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRDE----SGSPHT--------- 116 (156)
T ss_pred EECCC-HHHHHHHHHhh-------cEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEecc----CCCCcc---------
Confidence 34775 68888888743 3899999999888888888876321 11 11 11221 111111
Q ss_pred HHHHHHHhhhcCccEEEEEccCce
Q 019888 80 KWALDNLFYKHNFSRVIILEDDME 103 (334)
Q Consensus 80 k~al~~vF~~~~~~~vIiLEDDl~ 103 (334)
.-|+.++.. +.+.+||++|.-.
T Consensus 117 -KdL~~i~~~-d~~~vvivDd~~~ 138 (156)
T TIGR02250 117 -KSLLRLFPA-DESMVVIIDDRED 138 (156)
T ss_pred -ccHHHHcCC-CcccEEEEeCCHH
Confidence 146666642 3678999998643
No 114
>PF11735 CAP59_mtransfer: Cryptococcal mannosyltransferase 1 ; InterPro: IPR021047 The capsule of pathogenic fungi is a complex polysaccharide whose formation is determined by a number of enzymes including, most importantly, alpha-1,3-mannosyltransferase 1 [, ]. It is responsible for addition of mannose residues in an alpha-1,3 linkage to a polymannosly precursor.
Probab=21.39 E-value=6.8e+02 Score=23.42 Aligned_cols=106 Identities=16% Similarity=0.234 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCC------Ccc-eEEeccCCCCCC-CCCCchhHHHHHHHH
Q 019888 7 NYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYD------KLT-YMQHLDFEPVHA-DNPGELTAYYKIARH 78 (334)
Q Consensus 7 ~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~------~~~-~i~~~~~~~~~~-~~~~~~~~y~~ia~H 78 (334)
.+....|-.|.+.-++ +..-|-|.--|+...|.++++.++ ++. .|...+...... ..+.....-..+|+.
T Consensus 17 ~~~~~~ll~li~~LGp--~nv~vSIyE~~S~D~T~~~L~~L~~~L~~lgv~~~i~~~~~~~~~~~~~~~~~~RI~~LA~l 94 (241)
T PF11735_consen 17 SLWGDALLELIRFLGP--ENVFVSIYESGSWDGTKEALRALDAELDALGVPHSIVLSDITHRDEIERPPRLRRIEYLAEL 94 (241)
T ss_pred HHHHHHHHHHHHHhCc--CeEEEEEEeCCCCccHHHHHHHHHHHHHhCCCCeEEEeCCCcccccccccchhhhHHHHHHH
Confidence 3444333344444443 544444555667777777666554 222 233222111110 011112223457899
Q ss_pred HHHHHHHHhh-----hcCccEEEEEccCceeChhHHHHHHH
Q 019888 79 YKWALDNLFY-----KHNFSRVIILEDDMEIAPDFFDYFEA 114 (334)
Q Consensus 79 yk~al~~vF~-----~~~~~~vIiLEDDl~~sPdFf~y~~~ 114 (334)
.+.||.-+.+ ..++++||+|-|=..-+.|.++-+.+
T Consensus 95 RN~ALePL~~~~~~~~~~fd~VlfLNDV~f~~~Dil~LL~~ 135 (241)
T PF11735_consen 95 RNRALEPLYDLARKRGRRFDKVLFLNDVFFCPEDILELLFT 135 (241)
T ss_pred HhHHHHHHHhhhhccCCCcCEEEEecCcccCHHHHHHHHhh
Confidence 9999999984 22489999998534444555554444
No 115
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=21.22 E-value=5.1e+02 Score=22.44 Aligned_cols=35 Identities=9% Similarity=0.041 Sum_probs=21.6
Q ss_pred HHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCC
Q 019888 9 LERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDK 49 (334)
Q Consensus 9 l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~ 49 (334)
+..+|+.|.+.. +++.|...++...++.+++.++.
T Consensus 80 ~~~~L~~L~~~g------~~~~i~Sn~~~~~~~~~l~~~~l 114 (205)
T TIGR01454 80 VPELLAELRADG------VGTAIATGKSGPRARSLLEALGL 114 (205)
T ss_pred HHHHHHHHHHCC------CeEEEEeCCchHHHHHHHHHcCC
Confidence 355566655542 26777777776667776666553
No 116
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=20.88 E-value=1.2e+02 Score=32.62 Aligned_cols=40 Identities=20% Similarity=0.572 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHHhhhcCccEEEEEccCceeChhHHHHH
Q 019888 71 AYYKIARHYKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYF 112 (334)
Q Consensus 71 ~y~~ia~Hyk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~ 112 (334)
.|..++.|++.-|-.+|.. .++||.|++|+++--|-=..+
T Consensus 456 ~ylS~lnY~Rf~LPelLp~--l~KVLYLD~DVVV~gDLseLw 495 (657)
T PLN02910 456 KYLSMLNHLRFYLPEVYPK--LEKILFLDDDIVVQKDLTPLW 495 (657)
T ss_pred chhhHHHHHHHHHHHHhhh--cCeEEEEeCCEEecCchHHHH
Confidence 5678899999999999985 899999999999977654333
No 117
>KOG2288 consensus Galactosyltransferases [Carbohydrate transport and metabolism]
Probab=20.67 E-value=3.6e+02 Score=25.79 Aligned_cols=54 Identities=9% Similarity=0.066 Sum_probs=41.3
Q ss_pred hHHHHHHHHHHHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEE
Q 019888 70 TAYYKIARHYKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIM 126 (334)
Q Consensus 70 ~~y~~ia~Hyk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~ 126 (334)
.+|.+++.--+.-+++++...+++..|=++||..+-++ -+..+|..+...|+++
T Consensus 87 E~Y~~Ls~Kt~~~f~~A~~~~daeFyvKvDDDv~v~l~---~L~~~la~~r~~pr~Y 140 (274)
T KOG2288|consen 87 EAYEELSAKTKAFFSAAVAHWDAEFYVKVDDDVYVRLA---RLGTLLARERSHPRLY 140 (274)
T ss_pred HHHHHHHHHHHHHHHHHHHhccceEEEEccccceecHH---HHHHHHHhhccCCceE
Confidence 45666666666677778887789999999999999994 4466777777777775
No 118
>PLN02195 cellulose synthase A
Probab=20.19 E-value=1.1e+02 Score=34.57 Aligned_cols=46 Identities=17% Similarity=0.166 Sum_probs=33.6
Q ss_pred hHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCH-------HHHHHHhhCCCcce
Q 019888 6 ANYLERTINSVFKYQGSVASKYPLFVSQDGSNP-------QVKSKALSYDKLTY 52 (334)
Q Consensus 6 p~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~-------evr~vi~~~~~~~~ 52 (334)
|=.+-.|+-||+++.+| +++.-+|||+||+.. |+.+.++..--||-
T Consensus 268 Pl~t~NTVLSiLA~DYP-~eKlscYvSDDGgS~LTf~AL~EAa~FA~~WvPFCk 320 (977)
T PLN02195 268 PLITANTVLSILAVDYP-VDKVSCYVSDDGAAMLSFESLVETAEFARKWVPFCK 320 (977)
T ss_pred chHHHHHHHHHHhhccc-ccceEEEEecCCchHHHHHHHHHHHHHHHhhccccc
Confidence 34567889999999997 899999999999964 44455554322553
No 119
>PLN02742 Probable galacturonosyltransferase
Probab=20.17 E-value=1e+02 Score=32.26 Aligned_cols=40 Identities=20% Similarity=0.566 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHhhhcCccEEEEEccCceeChhHHHHH
Q 019888 71 AYYKIARHYKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYF 112 (334)
Q Consensus 71 ~y~~ia~Hyk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~ 112 (334)
.|..+..|++.-|-.+|.. .++||.|++|+++--|--+-+
T Consensus 334 ~y~s~~~y~R~~lP~llp~--l~KvlYLD~DvVV~~DL~eL~ 373 (534)
T PLN02742 334 KYLSMLNHLRFYIPEIYPA--LEKVVFLDDDVVVQKDLTPLF 373 (534)
T ss_pred ccccHHHHHHHHHHHHhhc--cCeEEEEeCCEEecCChHHHh
Confidence 4566889999999999985 899999999999988755444
Done!