Query 019888
Match_columns 334
No_of_seqs 233 out of 548
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 08:36:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019888.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019888hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fo8_A Alpha-1,3-mannosyl-glyc 100.0 6.3E-89 2.2E-93 660.8 30.4 327 1-332 9-339 (343)
2 1qg8_A Protein (spore coat pol 99.0 5.5E-09 1.9E-13 93.9 14.3 180 2-204 9-217 (255)
3 3bcv_A Putative glycosyltransf 98.7 7.3E-08 2.5E-12 85.5 10.3 104 2-126 13-117 (240)
4 2z86_A Chondroitin synthase; G 98.5 3.4E-07 1.2E-11 93.6 11.5 174 2-199 383-570 (625)
5 2z86_A Chondroitin synthase; G 98.5 1.2E-06 4.3E-11 89.4 13.7 108 2-131 101-211 (625)
6 4fix_A UDP-galactofuranosyl tr 98.4 1E-06 3.4E-11 91.7 10.5 112 1-130 187-304 (657)
7 1xhb_A Polypeptide N-acetylgal 98.3 4.2E-06 1.4E-10 82.6 12.9 180 2-203 37-259 (472)
8 2d7i_A Polypeptide N-acetylgal 98.2 5.2E-06 1.8E-10 84.7 12.0 179 2-202 120-338 (570)
9 2ffu_A Ppgalnact-2, polypeptid 98.1 1.4E-05 4.9E-10 79.6 12.1 175 2-202 74-290 (501)
10 3ckj_A Putative uncharacterize 98.1 4.2E-06 1.4E-10 79.2 6.7 109 2-131 56-169 (329)
11 3l7i_A Teichoic acid biosynthe 98.1 4.7E-07 1.6E-11 94.8 0.0 159 2-182 10-187 (729)
12 4hg6_A Cellulose synthase subu 98.0 5.3E-06 1.8E-10 88.1 6.4 146 2-168 148-333 (802)
13 3f1y_A Mannosyl-3-phosphoglyce 97.6 9.6E-05 3.3E-09 72.1 8.0 109 2-131 102-217 (387)
14 2nxv_A ATP synthase subunits r 96.8 0.0037 1.3E-07 56.4 8.4 91 2-130 23-114 (249)
15 2fy7_A Beta-1,4-galactosyltran 95.6 0.026 8.8E-07 52.6 7.4 71 2-108 73-146 (287)
16 2bo4_A Mannosylglycerate synth 93.9 0.084 2.9E-06 51.5 6.5 100 3-116 8-118 (397)
17 2wvl_A Mannosyl-3-phosphoglyce 89.0 1.6 5.4E-05 42.2 9.1 114 11-134 67-204 (391)
18 1g9r_A Glycosyl transferase; a 70.8 4.1 0.00014 37.6 4.7 112 6-129 12-129 (311)
19 3tzt_A Glycosyl transferase fa 56.6 30 0.001 31.3 7.6 115 4-129 15-134 (276)
20 1omz_A Alpha-1,4-N-acetylhexos 53.3 23 0.00079 32.9 6.2 95 2-116 36-131 (293)
21 3oam_A 3-deoxy-manno-octuloson 51.3 97 0.0033 27.0 10.0 91 3-116 25-116 (252)
22 3k8d_A 3-deoxy-manno-octuloson 50.8 99 0.0034 27.6 10.1 92 3-117 41-133 (264)
23 3st8_A Bifunctional protein GL 46.8 38 0.0013 33.0 7.1 107 3-133 38-153 (501)
24 2d0j_A Galactosylgalactosylxyl 44.5 1.8E+02 0.006 26.2 10.8 100 2-114 11-123 (246)
25 3tqd_A 3-deoxy-manno-octuloson 38.9 1.9E+02 0.0065 25.5 9.9 91 3-116 32-123 (256)
26 2zu9_A Mannosyl-3-phosphoglyce 34.2 88 0.003 30.1 7.2 22 91-113 160-182 (394)
27 3rsb_A Adenosylcobinamide-phos 31.9 1.6E+02 0.0056 24.0 7.9 91 4-117 26-118 (196)
28 1v84_A Galactosylgalactosylxyl 29.6 2.9E+02 0.01 24.9 9.4 100 2-114 11-129 (253)
29 3cu0_A Galactosylgalactosylxyl 27.8 3.6E+02 0.012 24.7 9.9 105 2-114 29-155 (281)
30 4fcu_A 3-deoxy-manno-octuloson 21.5 3.7E+02 0.013 23.5 8.6 90 4-116 25-116 (253)
31 2waw_A MOBA relate protein; un 20.4 3.3E+02 0.011 21.8 10.1 90 4-115 30-120 (199)
32 2wee_A MOBA-related protein; u 20.2 3.4E+02 0.012 21.7 8.5 88 4-115 30-120 (197)
No 1
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=100.00 E-value=6.3e-89 Score=660.82 Aligned_cols=327 Identities=42% Similarity=0.841 Sum_probs=284.3
Q ss_pred CcccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCC-cceEEeccCCCCC-CCCCCchhHHHHHHHH
Q 019888 1 MACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDK-LTYMQHLDFEPVH-ADNPGELTAYYKIARH 78 (334)
Q Consensus 1 ia~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~-~~~i~~~~~~~~~-~~~~~~~~~y~~ia~H 78 (334)
+|||||+ |++||+||++++|+ +++++|+|++||++++|+++|++|+. +.+++|++.+... ......+.+|++||+|
T Consensus 9 ~~yNRp~-l~~~L~sL~~~~p~-~~~~~iivsdDgs~~~~~~vi~~~~~~I~~~~~~d~~~~~~~~~N~g~~~y~~ia~h 86 (343)
T 1fo8_A 9 IACDRST-VRRCLDKLLHYRPS-AELFPIIVSQDCGHEETAQVIASYGSAVTHIRQPDLSNIAVQPDHRKFQGYYKIARH 86 (343)
T ss_dssp EESSCTT-HHHHHHHHHHHCSC-TTTSCEEEEECTTCHHHHHHHHTTGGGSEEEECSCCCCCCCCTTCGGGHHHHHHHHH
T ss_pred EECCcHH-HHHHHHHHHhcCCC-cCCcEEEEEECCCCHHHHHHHHHcCCceEEEEcCCccccccchhhcCcccchhHhHH
Confidence 5899999 99999999999974 67899999999999999999999853 5666666544321 0111235689999999
Q ss_pred HHHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCCCCCCCcccc--CCCceeeecCCCCccc
Q 019888 79 YKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSWNDNGQKQFV--HDPYVLYRSDFFPGLG 156 (334)
Q Consensus 79 yk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~ndng~~~~~--~~~~~lyrs~~fp~~G 156 (334)
|+|||+++|+.+++++||||||||++|||||+||++++++|++|++|+||||||++|....+ .+++.+||+++|||||
T Consensus 87 ~~~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~~~l~~y~~D~~I~~ISa~n~~g~~~~~~~~~~~~lyrs~~f~~wG 166 (343)
T 1fo8_A 87 YRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLWCVSAWNDNGKEQMVDSSKPELLYRTDFFPGLG 166 (343)
T ss_dssp HHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEEEEESCCTTCBGGGSCTTCTTCEEEESSCCCSS
T ss_pred HHHHHHHHHHhccCCEEEEEcCCCeECHHHHHHHHHHHHHhhcCCcEEEEecccCccccccccccCcceEEeecCCCchh
Confidence 99999999997779999999999999999999999999999999999999999999987654 4688999999999999
Q ss_pred ccccchhhhhhCCCCCchhHHHHHhhhhhhcCCeeEeecccccccccCcCCCcchhhhhhhccCCCCCCcccccccCccc
Q 019888 157 WMLTRTTWDELSPKWPKAYWDDWLRLKENHKGRQFIRPEVCRTYNFGEHGSSLGQFFQQYLAPIKLNDVPVDWKSRDLSY 236 (334)
Q Consensus 157 W~~~r~~W~el~~~wp~~~Wd~wlr~~~~rk~r~cI~P~isrt~n~G~~G~~~~~~~~~~l~~~~ln~~~v~~~~~d~~~ 236 (334)
||+||++|++++++||.++||+|||++++++|++||+|++|||+|||.+|+|+|+||++||++|++|+++|+|+++|++|
T Consensus 167 Wa~wr~~W~e~~~~wp~~~Wd~w~r~~~~~~~r~ci~P~vsrv~n~G~~G~~~~~f~~~~l~~~~~n~~~v~~~~~~~~~ 246 (343)
T 1fo8_A 167 WLLLAELWAELEPKWPKAFWDDWMRRPEQRKGRACVRPEISRTMTFGRKGVSHGQFFDQHLKFIKLNQQFVPFTQLDLSY 246 (343)
T ss_dssp EEEEHHHHHHHGGGCCSSCHHHHHTSHHHHTTCEEEEESSBSEEECC-------------CTTBCBCCSCCCGGGSCCGG
T ss_pred hhhcHHHHHHHhhhcchhHHHHHHHHHHHhCCCEEEEeccceeEeccccCcchhHHHHHHHhhcCCCcccccccccCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHhcCccccchhhhccCCCCceEEEEecChhHHHHHHHHhCccccCCCCCCCcCceeEEEEEEcCCc
Q 019888 237 LIKDNYEKYFAEIVKKATPVHGENVVLKAHDIEGDVRIEYKDQSHFEIIARQFGIFNEWKDGIPRTAYKGVVVFRYQTPR 316 (334)
Q Consensus 237 l~~~~Yd~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~i~y~~~~~~~~~a~~~~~~~~~~~g~~R~~y~gvv~~~~~~~~ 316 (334)
|.+++||+.|.++|.+|++++.++.........++++|+|+++++|+++|+|||||+|+|+|||||+|+|||+|+++ |+
T Consensus 247 l~~~~Y~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~i~y~~~~~~~~~a~~~~i~~d~~~g~~r~~y~gvv~~~~~-~~ 325 (343)
T 1fo8_A 247 LQQEAYDRDFLARVYGAPQLQVEKVRTNDRKELGEVRVQYTGRDSFKAFAKALGVMDDLKSGVPRAGYRGIVTFLFR-GR 325 (343)
T ss_dssp GSHHHHHHHHHHHHHHSCBCCHHHHHTTCCTTCSEEEEECCSHHHHHHHHHHTTCCCCEETTEETTCBTTBEEEEET-TE
T ss_pred HhHHHHHHHHHHHHhhCCcccHHHhhhcccCCCCcEEEEECChHHHHHHHHHhCCcccCcCCccccccceEEEEEEC-CE
Confidence 99999999999999999999887765433345689999999999999999999999999999999999999999998 99
Q ss_pred EEEEEcCCCccccCcC
Q 019888 317 RIFLVGPDSLRQLGIK 332 (334)
Q Consensus 317 ~v~l~~~~~~~~~~~~ 332 (334)
||||||+.+ +.||+
T Consensus 326 ~~~l~p~~~--~~~y~ 339 (343)
T 1fo8_A 326 RVHLAPPQT--WDGYD 339 (343)
T ss_dssp EEEEECCTT--CCSCC
T ss_pred EEEEECCCC--cCcCC
Confidence 999999987 45554
No 2
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.00 E-value=5.5e-09 Score=93.87 Aligned_cols=180 Identities=16% Similarity=0.127 Sum_probs=111.0
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCC---CcceEEeccCC-----CCCCCCCCchhHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYD---KLTYMQHLDFE-----PVHADNPGELTAYY 73 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~---~~~~i~~~~~~-----~~~~~~~~~~~~y~ 73 (334)
+||++++|++||+||+++.. ..++|+|..||+.+++.++++++. .+..+++.... .|.
T Consensus 9 ~yn~~~~l~~~l~Sl~~q~~---~~~eiivvDd~S~d~t~~~~~~~~~~~~i~~i~~~~~~~~~~~~n~----------- 74 (255)
T 1qg8_A 9 SYNKSDYVAKSISSILSQTF---SDFELFIMDDNSNEETLNVIRPFLNDNRVRFYQSDISGVKERTEKT----------- 74 (255)
T ss_dssp ESSCTTTHHHHHHHHHTCSC---CCEEEEEEECSCCHHHHHHHGGGGGSTTEEEEECCCCSHHHHHSSC-----------
T ss_pred cCCCHHHHHHHHHHHHhccC---CceEEEEEECCCCchHHHHHHHHhhcCCEEEEeccccccccccccc-----------
Confidence 79999999999999999875 368999999999999999999873 23333322000 221
Q ss_pred HHHHHHHHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCC------CCCCCccc--cCCCc-
Q 019888 74 KIARHYKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSW------NDNGQKQF--VHDPY- 144 (334)
Q Consensus 74 ~ia~Hyk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~------ndng~~~~--~~~~~- 144 (334)
.++.-.+.|+.. -..+.+++|++|..+.|++++-+.+.+ +.+|.+.+|++. +.+|.... .....
T Consensus 75 G~~~a~N~gi~~----a~g~~i~~lD~Dd~~~~~~l~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (255)
T 1qg8_A 75 RYAALINQAIEM----AEGEYITYATDDNIYMPDRLLKMVREL---DTHPEKAVIYSASKTYHLNENRDIVKETVRPAAQ 147 (255)
T ss_dssp HHHHHHHHHHHH----CCCSEEEEEETTEEECTTHHHHHHHHH---HHCTTCCEEEEEEEEEEEC---CEEEEEEECCCS
T ss_pred CHHHHHHHHHHH----cCCCEEEEeCCCCccChHHHHHHHHHH---HhCCCceEEEeceEEEEeCCCCcchhhccCchHH
Confidence 233333445444 358999999999999999887666554 455665555543 33332210 00000
Q ss_pred -eeeecCCCCcccccccchhhhhhC----CCCC-------chhHHHHHhhhhhhcCCeeEeecccccccccC
Q 019888 145 -VLYRSDFFPGLGWMLTRTTWDELS----PKWP-------KAYWDDWLRLKENHKGRQFIRPEVCRTYNFGE 204 (334)
Q Consensus 145 -~lyrs~~fp~~GW~~~r~~W~el~----~~wp-------~~~Wd~wlr~~~~rk~r~cI~P~isrt~n~G~ 204 (334)
........++.+.++.|+.++++. .-|+ ...|+-|+|. ...|+....|+.--.+..+.
T Consensus 148 ~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~--~~~g~~~~~~~~~~~~r~~~ 217 (255)
T 1qg8_A 148 VTWNAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRV--NHFYPFYPLDEELDLNYITD 217 (255)
T ss_dssp CBSCCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHH--TTTCCBEEEEEEEEEEEEC-
T ss_pred HHHhhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHH--HHhCCEEEecCcEEEEEEcC
Confidence 112334567888999999998743 2232 1255556664 34566555677654444443
No 3
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=98.69 E-value=7.3e-08 Score=85.52 Aligned_cols=104 Identities=13% Similarity=0.125 Sum_probs=72.5
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCC-cceEEeccCCCCCCCCCCchhHHHHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDK-LTYMQHLDFEPVHADNPGELTAYYKIARHYK 80 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~-~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk 80 (334)
+||++++|++||+||+++.. ..++|+|..||+...+.++++.+.. ...++.+. .+| .|. +.-.+
T Consensus 13 ~yn~~~~l~~~l~Sl~~q~~---~~~eiIvvDd~S~d~t~~~~~~~~~~~~~i~~i~-~~n-~G~----------~~a~N 77 (240)
T 3bcv_A 13 IYNVEKYLDQCVQALLAQTL---SDIEIILIDDESPDNCPKICDDYAAQYPNIKVIH-KKN-AGL----------GMACN 77 (240)
T ss_dssp ESSCTTTHHHHHHHHHTCSS---SSEEEEEEECCCSSSHHHHHHHHHHHCSSEEEEE-CCC-CCH----------HHHHH
T ss_pred cCCCHHHHHHHHHHHHhCcC---CCeEEEEEECCCCcCHHHHHHHHHhhCCCEEEEE-CCC-CCh----------HHHHH
Confidence 69999999999999999874 3689999999998888888776531 11222222 222 222 22223
Q ss_pred HHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEE
Q 019888 81 WALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIM 126 (334)
Q Consensus 81 ~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~ 126 (334)
.|+..+ ..+.+++|++|..+.|++++-+.+.+.. .+..+.
T Consensus 78 ~g~~~a----~g~~i~~lD~Dd~~~~~~l~~l~~~~~~--~~~~~v 117 (240)
T 3bcv_A 78 SGLDVA----TGEYVAFCDSDDYVDSDMYMTMYNVAQK--YTCDAV 117 (240)
T ss_dssp HHHHHC----CSSEEEECCTTCCCCTTHHHHHHHHHHH--HTCSEE
T ss_pred HHHHHc----CCCEEEEECCCCcCCHHHHHHHHHHHHh--cCCCEE
Confidence 344443 4899999999999999999887776654 245554
No 4
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=98.53 E-value=3.4e-07 Score=93.56 Aligned_cols=174 Identities=17% Similarity=0.163 Sum_probs=109.4
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCC-CcceEEeccCCCCCCCCCCchhHHHHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYD-KLTYMQHLDFEPVHADNPGELTAYYKIARHYK 80 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~-~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk 80 (334)
+||++++|.+||+||+++.. ..++|+|..||+.+.+.++++++. ....++.+. ++| .| ++.
T Consensus 383 ~yn~~~~l~~~l~s~~~q~~---~~~eiivvdd~S~d~t~~~~~~~~~~~~~i~~~~-~~n-~G----------~~~--- 444 (625)
T 2z86_A 383 AYNCSKYIVRCVESALNQTI---TDLEVCICDDGSTDDTLRILQEHYANHPRVRFIS-QKN-KG----------IGS--- 444 (625)
T ss_dssp ESSCTTTHHHHHHHHHSSSC---CSEEEEEEEESCSSSHHHHHHHHHTTCTTEEEEE-ECC-CC----------HHH---
T ss_pred CCCCHHHHHHHHHHHHhCcC---CCeEEEEEECcCChhHHHHHHHHHhhCCcEEEEe-CCC-CC----------HHH---
Confidence 79999999999999999875 467999999999888888887752 111222221 233 22 222
Q ss_pred HHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCC----CCCCCcccc--CCC---ceeeecCC
Q 019888 81 WALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSW----NDNGQKQFV--HDP---YVLYRSDF 151 (334)
Q Consensus 81 ~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~----ndng~~~~~--~~~---~~lyrs~~ 151 (334)
|++..+..-..+.+++|++|..+.|++++-+.+. +..++.+.+|.+. +.+|..... ..+ .......+
T Consensus 445 -a~n~g~~~a~g~~i~~ld~D~~~~~~~l~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (625)
T 2z86_A 445 -ASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDE---FRKDLSLACVYTTNRNIDREGNLISNGYNWPIYSREKLTSAM 520 (625)
T ss_dssp -HHHHHHHHCCSSEEEECCTTCEECTTHHHHHHHH---HHHCTTCSEEEEEEEEECTTSCEEEECCCCSSCCHHHHTTSC
T ss_pred -HHHHHHHhcCCCEEEEECCCcccChhHHHHHHHH---HHhCCCeeEEEeeeEEECCCCCEeccCcccccCCHHHHhhcc
Confidence 3344444335899999999999999999765543 4556776666552 223322100 001 11122345
Q ss_pred CCcccccccchhhhhhC---CCCC-chhHHHHHhhhhhhcCCeeEeeccccc
Q 019888 152 FPGLGWMLTRTTWDELS---PKWP-KAYWDDWLRLKENHKGRQFIRPEVCRT 199 (334)
Q Consensus 152 fp~~GW~~~r~~W~el~---~~wp-~~~Wd~wlr~~~~rk~r~cI~P~isrt 199 (334)
+++-+.++.|+.|+++. +... ...||-|+|. .+.|+....|++--.
T Consensus 521 ~~~~~~~~~r~~~~~~ggfd~~~~~~eD~dl~~r~--~~~g~~~~~~~~~~~ 570 (625)
T 2z86_A 521 ICHHFRMFTARAWNLTEGFNESISNAVDYDMYLKL--SEVGPFKHINKICYN 570 (625)
T ss_dssp CCCSCEEEEHHHHTTTTCCCSSCSSCHHHHHHHHH--TTTSCEEEEEEEEEE
T ss_pred cCCceEEEEHHHHHHhCCCCCccCChHHHHHHHHH--HHhCCEEEeCCcEEE
Confidence 66778889999998744 3332 2467778885 446765666876433
No 5
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=98.47 E-value=1.2e-06 Score=89.37 Aligned_cols=108 Identities=18% Similarity=0.311 Sum_probs=78.1
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCC---cceEEeccCCCCCCCCCCchhHHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDK---LTYMQHLDFEPVHADNPGELTAYYKIARH 78 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~---~~~i~~~~~~~~~~~~~~~~~~y~~ia~H 78 (334)
+||+++.|.+||+||+++..+ ..++|+|..||+.+++.++++.+.. +..+... .+ +. . .+.
T Consensus 101 ~~n~~~~l~~~l~sl~~q~~~--~~~eiivvDd~s~d~t~~~~~~~~~~~~i~~i~~~---~~--~~--g------~~~- 164 (625)
T 2z86_A 101 TYNRAKILAITLACLCNQKTI--YDYEVIVADDGSKENIEEIVREFESLLNIKYVRQK---DY--GY--Q------LCA- 164 (625)
T ss_dssp ESSCHHHHHHHHHHHHTCCCS--SCEEEEEEEESCSSCHHHHHHTTTTTSCEEEEEEC---CC--SC--C------HHH-
T ss_pred cCCcHHHHHHHHHHHHhhccC--CCeEEEEEeCCCchhHHHHHHHhhhcCCeEEEEeC---CC--Cc--c------hhH-
Confidence 699999999999999998642 4789999999999999999998853 3333321 11 11 1 222
Q ss_pred HHHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCC
Q 019888 79 YKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSW 131 (334)
Q Consensus 79 yk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~ 131 (334)
|++..+..-..+.++++++|+.+.|+++.-+.+. +..++.+..+++.
T Consensus 165 ---a~N~g~~~a~g~~v~~lD~D~~~~~~~l~~~~~~---~~~~~~~~~~g~~ 211 (625)
T 2z86_A 165 ---VRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMEL---LAVDDNVALIGPR 211 (625)
T ss_dssp ---HHHHHHHHCCSSEEEEECTTEEECTTHHHHHHHH---HHHCTTEEEECCE
T ss_pred ---HHHHHHHhCCcCEEEEECCCCCCCHHHHHHHHHH---HhcCCceEEEEee
Confidence 3333343335899999999999999999776654 4567777777653
No 6
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=98.38 E-value=1e-06 Score=91.75 Aligned_cols=112 Identities=13% Similarity=0.121 Sum_probs=75.6
Q ss_pred CcccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCH-----HHHHHHhhCC-CcceEEeccCCCCCCCCCCchhHHHH
Q 019888 1 MACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNP-----QVKSKALSYD-KLTYMQHLDFEPVHADNPGELTAYYK 74 (334)
Q Consensus 1 ia~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~-----evr~vi~~~~-~~~~i~~~~~~~~~~~~~~~~~~y~~ 74 (334)
.+|||+++|.+||+||.++.......++|||..||+.. ++.++++... .+..|+ .+ |. .
T Consensus 187 ptYN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~~~~I~vI~---~~-N~-----------G 251 (657)
T 4fix_A 187 PTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLGSRLSIHD---QP-NL-----------G 251 (657)
T ss_dssp CBSSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHHGGGEEEEE---CC-CC-----------H
T ss_pred EecCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHHhcCCCEEEEE---CC-CC-----------C
Confidence 37999999999999999875311123489999999843 4555555433 233333 22 32 2
Q ss_pred HHHHHHHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeC
Q 019888 75 IARHYKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSS 130 (334)
Q Consensus 75 ia~Hyk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa 130 (334)
.+.-++.|+..+....+++.+++|+||+++.|+++.-+.+.+ +.++.+.+|++
T Consensus 252 ~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l---~~~~~~~~vg~ 304 (657)
T 4fix_A 252 GSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMH---RFAKAPMLVGG 304 (657)
T ss_dssp HHHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHH---HHBSSCCEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHH---HhCCCcEEEEe
Confidence 344456688877764358999999999999999987666655 44555555553
No 7
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=98.32 E-value=4.2e-06 Score=82.65 Aligned_cols=180 Identities=16% Similarity=0.116 Sum_probs=105.5
Q ss_pred cccch-HHHHHHHHHHHhcCCCCCCCccEEEEeCCCCH-HHHHHHhhCC-Ccc-eEEeccCCCCCCCCCCchhHHHHHHH
Q 019888 2 ACNRA-NYLERTINSVFKYQGSVASKYPLFVSQDGSNP-QVKSKALSYD-KLT-YMQHLDFEPVHADNPGELTAYYKIAR 77 (334)
Q Consensus 2 a~NRp-~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~-evr~vi~~~~-~~~-~i~~~~~~~~~~~~~~~~~~y~~ia~ 77 (334)
+||++ ++|.+||+||+++.++ ...++|+|..||+.. ++.++++.+. ... .++.+..+.| .|. ++
T Consensus 37 ~yN~~~~~l~~~l~Sl~~q~~~-~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~~~v~vi~~~~n-~G~----------~~ 104 (472)
T 1xhb_A 37 FHNEAWSTLLRTVHSVINRSPR-HMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQR-SGL----------IR 104 (472)
T ss_dssp ESSCCHHHHHHHHHHHHHSSCG-GGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSSC-CCH----------HH
T ss_pred eCCCCHHHHHHHHHHHHhcCcH-hHceEEEEEECCCCcHHHHHHHHHHHHHCCCcEEEEECCCC-CCh----------HH
Confidence 69999 9999999999998863 234689999999976 4666665541 111 2333333333 222 22
Q ss_pred HHHHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCC---CCCCCcc-----c----c-----
Q 019888 78 HYKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSW---NDNGQKQ-----F----V----- 140 (334)
Q Consensus 78 Hyk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~---ndng~~~-----~----~----- 140 (334)
|.+..+..-..+.+++|++|+++.|++++-+.+. ++.++.+..+... +...... . .
T Consensus 105 ----a~N~g~~~A~gd~i~flD~D~~~~p~~L~~ll~~---~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (472)
T 1xhb_A 105 ----ARLKGAAVSRGQVITFLDAHCECTAGWLEPLLAR---IKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLN 177 (472)
T ss_dssp ----HHHHHHHHCCSSEEEEEESSEEECTTCHHHHHHH---HHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCC
T ss_pred ----HHHHHHHhccCCeEEEECCCeEeCccHHHHHHHH---HHhCCCEEEEeeeeeEcCCCceeccCCCcccceeeccce
Confidence 3344444334899999999999999998766554 4556665543321 1111100 0 0
Q ss_pred ---------------CCCceeeecCCCCcccccccchhhhhhC---CCCC---chhHHHHHhhhhhhcCCeeE-eecccc
Q 019888 141 ---------------HDPYVLYRSDFFPGLGWMLTRTTWDELS---PKWP---KAYWDDWLRLKENHKGRQFI-RPEVCR 198 (334)
Q Consensus 141 ---------------~~~~~lyrs~~fp~~GW~~~r~~W~el~---~~wp---~~~Wd~wlr~~~~rk~r~cI-~P~isr 198 (334)
.++....++..+.|-..++.|+.|+++. +... ...+|-++|. .+.|.... .|. ++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~R~--~~~G~~i~~~p~-~~ 254 (472)
T 1xhb_A 178 FRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRI--WQCGGTLEIVTC-SH 254 (472)
T ss_dssp EEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHH--HHTTCEEEEEEE-EE
T ss_pred eecccCCHHHHhcccCCCCCcccCccccceeEEEEHHHHHHcCCCCCcccccCchhHHHHHHH--HhcCCeEEEccC-cE
Confidence 0111133444556666788999998754 3332 3455666663 45665444 454 45
Q ss_pred ccccc
Q 019888 199 TYNFG 203 (334)
Q Consensus 199 t~n~G 203 (334)
+.|.+
T Consensus 255 v~H~~ 259 (472)
T 1xhb_A 255 VGHVF 259 (472)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 55554
No 8
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=98.25 E-value=5.2e-06 Score=84.66 Aligned_cols=179 Identities=14% Similarity=0.095 Sum_probs=104.9
Q ss_pred cccch-HHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHH-HHHHhhCC-CcceEEeccCCCCCCCCCCchhHHHHHHHH
Q 019888 2 ACNRA-NYLERTINSVFKYQGSVASKYPLFVSQDGSNPQV-KSKALSYD-KLTYMQHLDFEPVHADNPGELTAYYKIARH 78 (334)
Q Consensus 2 a~NRp-~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~ev-r~vi~~~~-~~~~i~~~~~~~~~~~~~~~~~~y~~ia~H 78 (334)
+||++ ++|.+||+||+++.++ ...++|||..||+...+ .++++.+. ....|+.+..+.| .|. ++
T Consensus 120 ~yNe~~~~L~~~L~Sll~qt~~-~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~~v~vi~~~~n-~G~----------~~- 186 (570)
T 2d7i_A 120 FHNEGWSSLLRTVHSVLNRSPP-ELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRILRTKKR-EGL----------IR- 186 (570)
T ss_dssp ESSCCHHHHHHHHHHHHHHSCG-GGEEEEEEEECSCCCGGGTHHHHHHHTTSTTEEEEECSSC-CCH----------HH-
T ss_pred ECCCCHHHHHHHHHHHHhcCCc-cCcEEEEEEECCCCcHHHHHHHHHHHHhCCeEEEEECCCC-CCH----------HH-
Confidence 69998 9999999999998863 22458999999997776 66665541 1122333322332 122 22
Q ss_pred HHHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCC---CCCC----------Ccc-------
Q 019888 79 YKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSW---NDNG----------QKQ------- 138 (334)
Q Consensus 79 yk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~---ndng----------~~~------- 138 (334)
|.+..+..-..+.+++|++|+++.|++++-+.+.+ ..++.+...+.. +... ...
T Consensus 187 ---A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~~l---~~~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (570)
T 2d7i_A 187 ---TRMLGASVATGDVITFLDSHCEANVNWLPPLLDRI---ARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMY 260 (570)
T ss_dssp ---HHHHHHHHCCSSEEEECCSSEEECTTCSHHHHHHH---HHCTTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCC
T ss_pred ---HHHHHHHhcCCCEEEEEcCCccccccHHHHHHHHH---HhCCCEEEeeeeeccCCCchhhccccCCccccccccccc
Confidence 33333433347999999999999999997666554 445555322111 1100 000
Q ss_pred ----------ccCCCceeeecCCCCcccccccchhhhhhC---CCCC---chhHHHHHhhhhhhcCCeeE-eeccccccc
Q 019888 139 ----------FVHDPYVLYRSDFFPGLGWMLTRTTWDELS---PKWP---KAYWDDWLRLKENHKGRQFI-RPEVCRTYN 201 (334)
Q Consensus 139 ----------~~~~~~~lyrs~~fp~~GW~~~r~~W~el~---~~wp---~~~Wd~wlr~~~~rk~r~cI-~P~isrt~n 201 (334)
...++...+++..+.|-..++.|+.|+++. +... ...+|-++| ..+.|...+ .|.. ++.|
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfDe~~~~~g~ED~dl~~R--l~~~G~~i~~~p~~-~v~H 337 (570)
T 2d7i_A 261 YKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFK--VWMCGGRMEDIPCS-RVGH 337 (570)
T ss_dssp EEEECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHHTTSSCTTCCSSSSHHHHHHHH--HHHTTCEEEEEEEE-EEEE
T ss_pred ccccccchhhhccCCCcceecccccceEEEEEHHHHHhcCCCCCcccccCcchHHHHHH--HHhCCCeEEEccCe-EEEE
Confidence 001112334455667778889999998754 3332 234555566 445665554 4653 4665
Q ss_pred c
Q 019888 202 F 202 (334)
Q Consensus 202 ~ 202 (334)
.
T Consensus 338 ~ 338 (570)
T 2d7i_A 338 I 338 (570)
T ss_dssp C
T ss_pred E
Confidence 4
No 9
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=98.13 E-value=1.4e-05 Score=79.65 Aligned_cols=175 Identities=17% Similarity=0.153 Sum_probs=101.9
Q ss_pred cccchH-HHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHH-HHHhhCCCcceEEeccCCCCCCCCCCchhHHHHHHHHH
Q 019888 2 ACNRAN-YLERTINSVFKYQGSVASKYPLFVSQDGSNPQVK-SKALSYDKLTYMQHLDFEPVHADNPGELTAYYKIARHY 79 (334)
Q Consensus 2 a~NRp~-~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr-~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hy 79 (334)
+||+++ +|.++|+||+++.++ ...++|+|..||+..++. .+++.+..+..++ .+.|. | +++
T Consensus 74 ~yN~~~~~L~~~l~Sl~~q~~~-~~~~EIIvVDDgS~D~t~~~~~~~~~~v~vi~---~~~n~-G----------~~~-- 136 (501)
T 2ffu_A 74 FHNEARSALLRTVVSVLKKSPP-HLIKEIILVDDYSNDPEDGALLGKIEKVRVLR---NDRRE-G----------LMR-- 136 (501)
T ss_dssp ESSCCHHHHHHHHHHHHHHSCG-GGEEEEEEEECSCSCTHHHHGGGGBTTEEEEE---CSSCC-H----------HHH--
T ss_pred eCcCcHHHHHHHHHHHHhhCch-hhceeEEEEECCCCchHHHHHHhcCCCEEEEE---CCCCc-C----------HHH--
Confidence 699997 999999999998863 224689999999977663 4444444344433 23321 2 233
Q ss_pred HHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCC----CCCCCcc----------c------
Q 019888 80 KWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSW----NDNGQKQ----------F------ 139 (334)
Q Consensus 80 k~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~----ndng~~~----------~------ 139 (334)
|++..+..-..+.+++|++|+++.|++++-+.+.+ +.++... |++. +..+... .
T Consensus 137 --A~N~G~~~A~gd~i~flD~D~~~~p~~L~~ll~~~---~~~~~~v-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (501)
T 2ffu_A 137 --SRVRGADAAQAKVLTFLDSHCECNEHWLEPLLERV---AEDRTRV-VSPIIDVINMDNFQYVGASADLKGGFDWNLVF 210 (501)
T ss_dssp --HHHHHHHHCCSSEEEECCSSEEECTTCHHHHHHHH---HHCTTEE-EEEEEEEECTTTCCEECBCSSEEEEECTTCCE
T ss_pred --HHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHH---HhCCCeE-EEeeeccCcCCCceeecCCcccceEeeecCCC
Confidence 34444443358999999999999999987766654 4444432 2211 1111000 0
Q ss_pred -------------cCCCceeeecCCCCcccccccchhhhhhC---CCC---CchhHHHHHhhhhhhcCCee-Eeeccccc
Q 019888 140 -------------VHDPYVLYRSDFFPGLGWMLTRTTWDELS---PKW---PKAYWDDWLRLKENHKGRQF-IRPEVCRT 199 (334)
Q Consensus 140 -------------~~~~~~lyrs~~fp~~GW~~~r~~W~el~---~~w---p~~~Wd~wlr~~~~rk~r~c-I~P~isrt 199 (334)
..++....++..+.|-..++.|+.++++. +.. ....+|-++|. .+.|... +.|. +++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~Rl--~~~G~~i~~~p~-~~v 287 (501)
T 2ffu_A 211 KWDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRV--WQCGGSLEIIPC-SRV 287 (501)
T ss_dssp EEEECCHHHHHHTSSCTTSCEECSSCCSSSEEEEHHHHHHTTCCCTTCCSSSSHHHHHHHHH--HHTTCEEEEEEE-EEE
T ss_pred ccccCCHHHHhhccCCCCCcccCccccceEEEEEHHHHHHhCCCCccccccCcchHHHHHHH--HhcCCeEEEccC-cEE
Confidence 00122233444566777899999998754 322 23455666663 3455444 3463 344
Q ss_pred ccc
Q 019888 200 YNF 202 (334)
Q Consensus 200 ~n~ 202 (334)
.|.
T Consensus 288 ~H~ 290 (501)
T 2ffu_A 288 GHV 290 (501)
T ss_dssp EEC
T ss_pred EEE
Confidence 443
No 10
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=98.08 E-value=4.2e-06 Score=79.21 Aligned_cols=109 Identities=17% Similarity=0.183 Sum_probs=76.2
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCcceEEe---cc-CCCCCCCCCCchhHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKLTYMQH---LD-FEPVHADNPGELTAYYKIAR 77 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~~~i~~---~~-~~~~~~~~~~~~~~y~~ia~ 77 (334)
+||+.++|.+||+||+++..+ ..++|+|..||+.+.+.++++++.. ..+.. +. .+.| .|. +.
T Consensus 56 ~yN~~~~l~~~l~sl~~q~~~--~~~eiivVDdgS~D~t~~~~~~~~~-~~~~~~~~~~~~~~n-~G~----------~~ 121 (329)
T 3ckj_A 56 ALDEEDTIGSVIDSISPLVDG--LVDELIVLDSGSTDDTEIRAVAAGA-RVVSREQALPEVPIR-PGK----------GE 121 (329)
T ss_dssp ESSCTTTHHHHHHHHGGGBTT--TBSEEEEEECSCCSSHHHHHHHTTC-EEEEHHHHCTTSCCC-CSH----------HH
T ss_pred eCCCHHHHHHHHHHHHHhhCC--CCcEEEEEeCCCCchHHHHHHHhhh-hhccceeeeccCCCC-CCH----------HH
Confidence 699999999999999998742 4579999999999999999998853 21111 11 2222 121 22
Q ss_pred HHHHHHHHHhhhcCccEEEEEccCce-eChhHHHHHHHHHHhhcCCCCEEEEeCC
Q 019888 78 HYKWALDNLFYKHNFSRVIILEDDME-IAPDFFDYFEAAADLLDKDKSIMAVSSW 131 (334)
Q Consensus 78 Hyk~al~~vF~~~~~~~vIiLEDDl~-~sPdFf~y~~~~l~~y~~D~~I~~ISa~ 131 (334)
|++..+..-..+.++++++|.. +.|+++.-+.+ .+..++.+..|.|.
T Consensus 122 ----a~n~g~~~a~gd~i~~lD~D~~~~~p~~l~~l~~---~l~~~~~~~~v~g~ 169 (329)
T 3ckj_A 122 ----ALWRSLAASRGDIVVFVDSDLINPHPMFVPWLVG---PLLTGDGVHLVKSF 169 (329)
T ss_dssp ----HHHHHHHHCCCSEEEECCTTEESCCTTHHHHHHH---HHHSCSSCCEEEEE
T ss_pred ----HHHHHHHhCCCCEEEEECCCCCCcChHHHHHHHH---HHHhCCCccEEEEE
Confidence 4444444445899999999999 89999876554 33566776655553
No 11
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=98.07 E-value=4.7e-07 Score=94.78 Aligned_cols=159 Identities=13% Similarity=0.175 Sum_probs=0.0
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCc--ceEEeccCCCCCCCCCCchhHHHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKL--TYMQHLDFEPVHADNPGELTAYYKIARHY 79 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~--~~i~~~~~~~~~~~~~~~~~~y~~ia~Hy 79 (334)
+||++++|.+||+||+++.. ..++|+|..||+.+++.++++++..- ..|+.+..+.| .|..++ .
T Consensus 10 ~yN~~~~L~~~L~Sll~Qt~---~~~EIIVVDDgStD~t~~il~~~~~~~~~~i~~i~~~~n-~G~~~a----------r 75 (729)
T 3l7i_A 10 YYNAEEYITGCLESIKQQRT---QDFNLIIVNDGSTDQSKKLMDEAIKDYDKNIRFIDLDEN-SGHAHA----------R 75 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCHHHHHHHHHHHHhCCC---CCeEEEEEECCCCCcHHHHHHHHHHhCCCCEEEEECCCC-CCHHHH----------H
Confidence 79999999999999999875 37799999999999999988877321 12332222333 233221 2
Q ss_pred HHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEE--EEeCCCCCCCccc----cC----CCcee--e
Q 019888 80 KWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIM--AVSSWNDNGQKQF----VH----DPYVL--Y 147 (334)
Q Consensus 80 k~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~--~ISa~ndng~~~~----~~----~~~~l--y 147 (334)
+.|+..+ ..+.+++|++|..+.|++++-+.+.+. +..+. .+..+...+.... .. ..... .
T Consensus 76 N~gi~~A----~gdyI~flD~Dd~~~p~~l~~l~~~l~----~~d~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (729)
T 3l7i_A 76 NIALEEV----ETPYFMFLDADDELASYAITFYLEKFN----NTDGLIAPIHSFTTQRPQFVDLDRVRVEYFNAKENINS 147 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhc----cCCEEEEECCCCCCChhHHHHHHHHhc----CCCEEEEeeEEeecCCCccccccceeeeeecchhhHHH
Confidence 2355444 379999999999999999987777665 33332 2222222211100 00 00000 0
Q ss_pred ecCCCCcccccccchhhhhhCCCCCch-----hHHHHHhh
Q 019888 148 RSDFFPGLGWMLTRTTWDELSPKWPKA-----YWDDWLRL 182 (334)
Q Consensus 148 rs~~fp~~GW~~~r~~W~el~~~wp~~-----~Wd~wlr~ 182 (334)
.....++|+.++.|+.+++..-.|+.. .||-|+|.
T Consensus 148 ~~~~~~~~~~~~rr~~l~~~gl~fde~~~~~ED~d~~~rl 187 (729)
T 3l7i_A 148 FLRKQSACNIIFRTAIVRAHHIRFNENLNTYVDWSFVLEY 187 (729)
T ss_dssp ----------------------------------------
T ss_pred HhhccchhheeeeHHHHHHcCCCcCCCCCcccCHHHHHHH
Confidence 011346788899999998655334332 45555663
No 12
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=98.00 E-value=5.3e-06 Score=88.08 Aligned_cols=146 Identities=16% Similarity=0.158 Sum_probs=91.3
Q ss_pred cccchHHH-HHHHHHHHhcCCCCCCCccEEEEeCCCCHHH---------------HHHHhhCC---CcceEEeccCCCCC
Q 019888 2 ACNRANYL-ERTINSVFKYQGSVASKYPLFVSQDGSNPQV---------------KSKALSYD---KLTYMQHLDFEPVH 62 (334)
Q Consensus 2 a~NRp~~l-~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~ev---------------r~vi~~~~---~~~~i~~~~~~~~~ 62 (334)
+||++..+ ++||+||+++.++ .++++|+|..||+.+.+ ++.++.+. .+..+.. +++.
T Consensus 148 tyNe~~~lL~~~L~Sl~~q~yp-~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~v~~i~~---~~~~ 223 (802)
T 4hg6_A 148 SYNEPADMLSVTLAAAKNMIYP-ARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELGVVYSTR---ERNE 223 (802)
T ss_dssp CTTCCHHHHHHHHHHHHTSSCC-TTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHTCEEEEC---SSCC
T ss_pred ECCCCHHHHHHHHHHHHhccCC-CCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhcCcEEEEe---cCCC
Confidence 68999765 9999999998875 45689999999986655 22222221 1333332 2221
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCCCC--CCC----
Q 019888 63 ADNPGELTAYYKIARHYKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSWND--NGQ---- 136 (334)
Q Consensus 63 ~~~~~~~~~y~~ia~Hyk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~nd--ng~---- 136 (334)
.| .+. |++..+..-+.|.++++++|+.+.||++.-+.+. +++|+.+.+|++-.. ++.
T Consensus 224 ~G----------Ka~----alN~gl~~a~gd~Il~lDaD~~~~pd~L~~lv~~---~~~dp~v~~V~~~~~~~~~~~~~~ 286 (802)
T 4hg6_A 224 HA----------KAG----NMSAALERLKGELVVVFDADHVPSRDFLARTVGY---FVEDPDLFLVQTPHFFINPDPIQR 286 (802)
T ss_dssp SH----------HHH----HHHHHHHHCCCSEEEECCTTEEECTTHHHHHHHH---HHHSSSCCEEECCCCBSSCCHHHH
T ss_pred Cc----------chH----HHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHH---HhcCCCeEEEeccEEEeCCchHhh
Confidence 11 122 4555555556899999999999999998766554 456899988887432 111
Q ss_pred -----ccccCCCc----------eeeecCCCCcccccccchhhhhhC
Q 019888 137 -----KQFVHDPY----------VLYRSDFFPGLGWMLTRTTWDELS 168 (334)
Q Consensus 137 -----~~~~~~~~----------~lyrs~~fp~~GW~~~r~~W~el~ 168 (334)
........ ..+...+++|-+-++.|+.++++.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~vG 333 (802)
T 4hg6_A 287 NLALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALDEAG 333 (802)
T ss_dssp HHTCCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHHHHT
T ss_pred hhhHHhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHHHHcC
Confidence 00000000 111223567778889999998864
No 13
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=97.63 E-value=9.6e-05 Score=72.08 Aligned_cols=109 Identities=11% Similarity=0.048 Sum_probs=75.7
Q ss_pred cccchHHHHHHHHHHHhc--CCCCCCCccEEEEeCCCCHHHHHHHhhCCCcceEEe----ccCCCCCCCCCCchhHHHHH
Q 019888 2 ACNRANYLERTINSVFKY--QGSVASKYPLFVSQDGSNPQVKSKALSYDKLTYMQH----LDFEPVHADNPGELTAYYKI 75 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~--~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~~~i~~----~~~~~~~~~~~~~~~~y~~i 75 (334)
+||..+.+.+||++|.++ +. ...++|+|..||+.+.|.++++++.. ..+.. +..+.| .|. ..
T Consensus 102 ~yNe~~~l~~~l~sl~~~l~~~--~~~~EIIVVDDgStD~T~~i~~~~~~-~v~~~~~~~i~~~~n-~G~----g~---- 169 (387)
T 3f1y_A 102 SRNVADTVGGIIDEIHALNERA--PLIDQILVVDADSEDGTAGVAASHGA-EVYSENELMSGYGDA-HGK----GD---- 169 (387)
T ss_dssp ESSCTTTHHHHHHHHHHHHHHS--CCCSEEEEEECSCSSSHHHHHHHTTC-EEEEGGGTTGGGCSC-CSH----HH----
T ss_pred cCCCHHHHHHHHHHHHHHHhcC--CCCeEEEEEcCcCCccHHHHHHHhCc-hhcccceeEecCCcc-CCH----HH----
Confidence 799999999999999873 32 24579999999999999999999853 22221 111222 121 11
Q ss_pred HHHHHHHHHHHhhhcCccEEEEEccCce-eChhHHHHHHHHHHhhcCCCCEEEEeCC
Q 019888 76 ARHYKWALDNLFYKHNFSRVIILEDDME-IAPDFFDYFEAAADLLDKDKSIMAVSSW 131 (334)
Q Consensus 76 a~Hyk~al~~vF~~~~~~~vIiLEDDl~-~sPdFf~y~~~~l~~y~~D~~I~~ISa~ 131 (334)
|++..+..-..+.+++++.|+. +.|+++.-+.+.+ ..++.+-+|.|+
T Consensus 170 ------A~n~G~~~A~gd~i~~lDaD~~~~~p~~L~~l~~~l---~~~p~~d~v~G~ 217 (387)
T 3f1y_A 170 ------AMWRALSVTRGDLVLYIDADTRDFRPQLAYGVLGPV---LEVPGVRFVKAA 217 (387)
T ss_dssp ------HHHHHTTTCCSSEEEECCTTCSSCCTHHHHTTHHHH---HHSTTCCEEEEE
T ss_pred ------HHHHHHHhcCCCEEEEEcCCCCcCCHHHHHHHHHHH---HHCCCceEEEEe
Confidence 6666666556899999999999 8999987665543 455666555553
No 14
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=96.78 E-value=0.0037 Score=56.37 Aligned_cols=91 Identities=13% Similarity=0.155 Sum_probs=60.7
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCcceEEeccCCCCCCCCCCchhHHHHHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKLTYMQHLDFEPVHADNPGELTAYYKIARHYKW 81 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk~ 81 (334)
+||+.+.|++||+||.+.-.. ...++|+|..+|+.. + .+.+.
T Consensus 23 ~yN~~~~l~~~l~sl~~sl~~-q~~~EiIVVDn~s~d--------~---------------~g~a~-------------- 64 (249)
T 2nxv_A 23 LVRDQAKYDRLLESFERFGFT-PDKAEFLAADNREGN--------Q---------------FHGFS-------------- 64 (249)
T ss_dssp EESCHHHHHHHHHHHHHTTCC-TTTEEEEEEECTTSC--------S---------------CCTTT--------------
T ss_pred eeCCHHHHHHHHHHHHHhccC-CCcEEEEEEECCCCC--------c---------------ccHHH--------------
Confidence 599999999999999864211 122789998877632 0 01111
Q ss_pred HHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhc-CCCCEEEEeC
Q 019888 82 ALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLD-KDKSIMAVSS 130 (334)
Q Consensus 82 al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~-~D~~I~~ISa 130 (334)
|.+.-...-..+++++|..|+.+.|++++-+.+.++... .+|.+.+++.
T Consensus 65 a~N~Gi~~A~g~yl~fln~D~~~~~~~l~~l~~~~~~~~~~~~~vg~vg~ 114 (249)
T 2nxv_A 65 WHKQMLPRCKGRYVIFCHEDVELVDRGYDDLVAAIEALEEADPKWLVAGV 114 (249)
T ss_dssp HHHHHGGGCCSSEEEEEETTEECSSCCHHHHHHHHHHHHHHCTTEEEEES
T ss_pred HHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhcccCCCCeeEEee
Confidence 444444443479999999999999999987666554321 2588876654
No 15
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=95.56 E-value=0.026 Score=52.56 Aligned_cols=71 Identities=13% Similarity=0.153 Sum_probs=48.4
Q ss_pred cccchHHHHHHHHHHH---hcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCcceEEeccCCCCCCCCCCchhHHHHHHHH
Q 019888 2 ACNRANYLERTINSVF---KYQGSVASKYPLFVSQDGSNPQVKSKALSYDKLTYMQHLDFEPVHADNPGELTAYYKIARH 78 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~---~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~H 78 (334)
+|||+++|++||+||. +++. ..++|+|..|+.+. +.+. ++-
T Consensus 73 ~yN~~~~L~~~L~sl~~~l~q~~---~~~EIiVVdds~d~--------------------~f~~-------------a~a 116 (287)
T 2fy7_A 73 FRNRQEHLKYWLYYLHPVLQRQQ---LDYGIYVINQAGDT--------------------IFNR-------------AKL 116 (287)
T ss_dssp ESSCHHHHHHHHHHHHHHHHHTT---CEEEEEEEEECSSS--------------------CCCH-------------HHH
T ss_pred eCCCHHHHHHHHHHHHHHHHHhc---CCceEEEEEeCCCC--------------------ccch-------------hhh
Confidence 6999999999999999 4443 46789998884320 0110 111
Q ss_pred HHHHHHHHhhhcCccEEEEEccCceeChhH
Q 019888 79 YKWALDNLFYKHNFSRVIILEDDMEIAPDF 108 (334)
Q Consensus 79 yk~al~~vF~~~~~~~vIiLEDDl~~sPdF 108 (334)
.+.|+......-..+.++++++|+++.||+
T Consensus 117 ~N~G~~~al~~A~gd~i~flD~D~i~~~d~ 146 (287)
T 2fy7_A 117 LNVGFQEALKDYDYTCFVFSDVDLIPMNDH 146 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEEECTTEEESBTT
T ss_pred hhhHHHHHHHhCCCCEEEEECCCcccCCCc
Confidence 122443333444589999999999999996
No 16
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=93.90 E-value=0.084 Score=51.48 Aligned_cols=100 Identities=13% Similarity=0.101 Sum_probs=59.4
Q ss_pred ccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHh----hCC---CcceEEeccC-CC--CCCCCCCchhHH
Q 019888 3 CNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKAL----SYD---KLTYMQHLDF-EP--VHADNPGELTAY 72 (334)
Q Consensus 3 ~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~----~~~---~~~~i~~~~~-~~--~~~~~~~~~~~y 72 (334)
||. +.+..+++.|..... ...++|+|..||+...|.++++ +.. +...+.+... .. | .|....
T Consensus 8 ~~e-E~I~~vl~~l~~~~~--~~~~EIIVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n-~GkG~A---- 79 (397)
T 2bo4_A 8 FKH-EHPEVLLHNVRVAAA--HPRVHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLR-PGKGDG---- 79 (397)
T ss_dssp CCS-SCHHHHHHHHHHHHH--STTCCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSS-SSHHHH----
T ss_pred CCc-cCHHHHHHHHHHhcc--CCCeEEEEEECcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCC-CCHHHH----
Confidence 443 457888888864321 1246899999999999999988 221 2232322211 01 2 233111
Q ss_pred HHHHHHHHHHHHHHhhhcCccEEEEEccCce-eChhHHHHHHHHH
Q 019888 73 YKIARHYKWALDNLFYKHNFSRVIILEDDME-IAPDFFDYFEAAA 116 (334)
Q Consensus 73 ~~ia~Hyk~al~~vF~~~~~~~vIiLEDDl~-~sPdFf~y~~~~l 116 (334)
+.. |+.++......+.+++++-|+. ..|+.+.-|.+.+
T Consensus 80 --l~~----G~~~Al~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l 118 (397)
T 2bo4_A 80 --MNT----ALRYFLEETQWERIHFYDADITSFGPDWITKAEEAA 118 (397)
T ss_dssp --HHH----HHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHH
T ss_pred --HHH----HHHHHHHhCCCCEEEEEcCCCCCCCHHHHHHHHHHH
Confidence 111 3322224445899999999996 8999887766543
No 17
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=89.02 E-value=1.6 Score=42.21 Aligned_cols=114 Identities=14% Similarity=0.068 Sum_probs=66.7
Q ss_pred HHHHHHHhcCCCCCCCccEEEEeCCCCHHH---HHHHhhCC-----CcceEEeccCC----CCCCCC---------CCch
Q 019888 11 RTINSVFKYQGSVASKYPLFVSQDGSNPQV---KSKALSYD-----KLTYMQHLDFE----PVHADN---------PGEL 69 (334)
Q Consensus 11 r~L~sL~~~~~~~~~~~~l~Is~Dg~~~ev---r~vi~~~~-----~~~~i~~~~~~----~~~~~~---------~~~~ 69 (334)
++|++++++.+ .+++|+|.+||+.+.+ .++++.|. .++-|++.+.+ .+..|. .+.-
T Consensus 67 ~lLesVl~qi~---~d~eIIlVdDGS~D~s~~e~dil~~~~~~~~~ri~viHQkn~gls~Ar~~~G~~~il~~~~~vR~G 143 (391)
T 2wvl_A 67 KLLEGVLSGIP---HEALILVASNSSPDRFQMERDLLEEFAHLTERPALIFHQKDPALAEALRAGGYPHPIGEDGLVRSG 143 (391)
T ss_dssp HHHHHHHHTSC---TTSEEEEEECCCHHHHHHHHHHHHHHHHHTTCCEEEEETTCHHHHHHHHHTTCCTTBCTTSSBCCS
T ss_pred HHHHHHHhcCC---CCceEEEEECCCCCChHhHHHHHHHHHhhcccceEEEeccChHHHHHHHhcCcchhhccccccccc
Confidence 47999999985 5789999999997666 45666653 14445442200 000010 0000
Q ss_pred hHHHHHHHHHHHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhh--cCCCCEEEE-eCCCCC
Q 019888 70 TAYYKIARHYKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLL--DKDKSIMAV-SSWNDN 134 (334)
Q Consensus 70 ~~y~~ia~Hyk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y--~~D~~I~~I-Sa~ndn 134 (334)
++...|. |+..+= ..+.++|-|++-|..++.+-.+|+......+ ...+ --+| =+|+.-
T Consensus 144 KGegmi~-----Gi~~Ak-~~~geYVgFvDADdyi~~~v~Eyvk~yaag~~~a~s~-~~MVRI~wR~k 204 (391)
T 2wvl_A 144 KAEGMIL-----ALVFAA-LSGRRYVGFIDADNYFPGAVWEYVRAYAAGFLMAKTP-FAMVRILWRYK 204 (391)
T ss_dssp HHHHHHH-----HHHHHH-HTTCSEEEECCSCBSCHHHHHHHHHHHHHHHHHCCSS-EEEEEEECCCC
T ss_pred chHHHHH-----HHHHHH-hcCCCEEEEEcCcCCCccCHHHHHHHHHHHhcccCCC-cceEEEecccC
Confidence 1111111 222210 0137999999999999999999998766553 2333 4455 678763
No 18
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=70.82 E-value=4.1 Score=37.63 Aligned_cols=112 Identities=15% Similarity=0.162 Sum_probs=60.0
Q ss_pred hHHHHHHHHHH-HhcCCCCCCCccEEEEeCCCCHHHHHHHhhC----CC-cceEEeccCCCCCCCCCCchhHHHHHHHHH
Q 019888 6 ANYLERTINSV-FKYQGSVASKYPLFVSQDGSNPQVKSKALSY----DK-LTYMQHLDFEPVHADNPGELTAYYKIARHY 79 (334)
Q Consensus 6 p~~l~r~L~sL-~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~----~~-~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hy 79 (334)
-..+.-++.|| +++. ..++.++|..|+-.++.++.++.. +. +..+ .++.+.. ...+.. .++...+..+
T Consensus 12 ~~~~~vli~Sl~l~~~---~~~~~f~il~~~ls~~~~~~L~~~~~~~~~~i~~~-~~~~~~~-~~~~~~-~~~~s~~~y~ 85 (311)
T 1g9r_A 12 AAYLCVAAKSVEAAHP---DTEIRFHVLDAGISEANRAAVAANLRGGGGNIRFI-DVNPEDF-AGFPLN-IRHISITTYA 85 (311)
T ss_dssp HHHHHHHHHHHHHTCT---TSCCEEEEEESSCCHHHHHHHHHHSGGGTTTEEEE-ECCGGGG-TTSCCC-CTTCCGGGGG
T ss_pred HHHHHHHHHHHHHHcC---CCCceEEEEECCCCHHHHHHHHHHHHHcCCEEEEE-EcCHHHH-hcCccc-cccCCHHHHH
Confidence 45677888999 7664 256788888888777766555443 32 2221 1111100 011100 0011122333
Q ss_pred HHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEe
Q 019888 80 KWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVS 129 (334)
Q Consensus 80 k~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~IS 129 (334)
|.-+-.+|. .+++||.|+.|+++--|-=+-++. =-.+..+.++.
T Consensus 86 Rl~l~~ll~--~~~kvlyLD~D~iv~~di~eL~~~----~l~~~~~aav~ 129 (311)
T 1g9r_A 86 RLKLGEYIA--DCDKVLYLDIDVLVRDSLTPLWDT----DLGDNWLGASI 129 (311)
T ss_dssp GGGHHHHCC--SCSCEEEECSSEEECSCCHHHHTC----CCTTCSEEEEE
T ss_pred HHHHHHHhh--hcCEEEEEcCCeEeccCHHHHhcc----CCCCcEEEEEe
Confidence 444555664 489999999999998775444432 11344566664
No 19
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=56.56 E-value=30 Score=31.25 Aligned_cols=115 Identities=12% Similarity=0.155 Sum_probs=64.2
Q ss_pred cchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHH----HHhhCCCcceEEeccCCCCCC-CCCCchhHHHHHHHH
Q 019888 4 NRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKS----KALSYDKLTYMQHLDFEPVHA-DNPGELTAYYKIARH 78 (334)
Q Consensus 4 NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~----vi~~~~~~~~i~~~~~~~~~~-~~~~~~~~y~~ia~H 78 (334)
|--..+.-++.||+++.+ ...+.++|..|+-.++.++ +++.++ +.++....+.... +.+ ....+..+..
T Consensus 15 ~Y~~~~~v~i~Sl~~~~~--~~~~~~~il~~~is~~~~~~L~~~~~~~~--~~i~~~~~~~~~~~~~~--~~~~~s~~~~ 88 (276)
T 3tzt_A 15 NYIPQMKVLMTSIYINNP--GRIFDVYLIHSRISEDKLKDLGEDLKKFS--YTLYPIRATDDLFSFAK--VTDRYPKEMY 88 (276)
T ss_dssp GGHHHHHHHHHHHHHHST--TCCEEEEEEESCCCHHHHHHHHHHHHTTT--CEEEEEECC---------------CHHHH
T ss_pred hHHHHHHHHHHHHHHhCC--CCceEEEEEeCCCCHHHHHHHHHHHHHcC--CEEEEEEeCHHHHhcCc--cccccCHHHH
Confidence 344567889999999874 2577888888887665544 334343 2222221111000 110 0111224455
Q ss_pred HHHHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEe
Q 019888 79 YKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVS 129 (334)
Q Consensus 79 yk~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~IS 129 (334)
+|.-+..++.. .+++||.|+.|+++--|.-+.++. + -.+..+.++.
T Consensus 89 ~rl~~~~l~p~-~~~kvlylD~D~iv~~di~~L~~~--d--l~~~~~aav~ 134 (276)
T 3tzt_A 89 YRLLAGEFLPE-NLGEILYLDPDMLVINPLDDLLRT--D--ISDYILAAAS 134 (276)
T ss_dssp HHHTHHHHSCT-TCCEEEEECSSEEECSCSHHHHTC--C--CTTSSEEEEE
T ss_pred HHHHHHHHccc-ccCeEEEEeCCeeecCCHHHHhhc--C--CCCCeEEEEE
Confidence 66666666631 389999999999998776665542 1 1234466654
No 20
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=53.26 E-value=23 Score=32.87 Aligned_cols=95 Identities=15% Similarity=0.067 Sum_probs=50.9
Q ss_pred cccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCC-cceEEeccCCCCCCCCCCchhHHHHHHHHHH
Q 019888 2 ACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDK-LTYMQHLDFEPVHADNPGELTAYYKIARHYK 80 (334)
Q Consensus 2 a~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~-~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk 80 (334)
||+|++.|.++|+.+.++... .++ |+|-.+...........+++. -..|+......|. +...+..
T Consensus 36 ty~R~~~L~~lv~~~~~~~~v--~~I-vVvWn~~~~~pp~~~~~~~~~~~vpv~v~~~~~ns--LnnRF~p--------- 101 (293)
T 1omz_A 36 TYNRTDLLLRLLNHYQAVPSL--HKV-IVVWNNVGEKGPEELWNSLGPHPIPVIFKPQTANK--MRNRLQV--------- 101 (293)
T ss_dssp ESSCHHHHHHHHHHHTTSTTE--EEE-EEEECCTTCCCTHHHHHHTCCCSSCEEEEECSSCC--GGGGGSC---------
T ss_pred eecccHHHHHHHHHHhcCCCC--CeE-EEEeCCCCCCCChhhccccCCCCccEEEEeCCCCc--hhhccCC---------
Confidence 799999999999999887642 332 344444321112222233321 0122222222221 1111111
Q ss_pred HHHHHHhhhcCccEEEEEccCceeChhHHHHHHHHH
Q 019888 81 WALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAA 116 (334)
Q Consensus 81 ~al~~vF~~~~~~~vIiLEDDl~~sPdFf~y~~~~l 116 (334)
+....-+.|..+|||..++.|=+++-=+.-
T Consensus 102 ------~~~i~T~AVLslDDDv~l~~~el~faF~vW 131 (293)
T 1omz_A 102 ------FPEVETNAVLMVDDDTLISAQDLVFAFSIW 131 (293)
T ss_dssp ------CTTCCSSEEEEECTTEEECHHHHHHHHHHH
T ss_pred ------CccCCcCEEEEEcCCCCCCHHHHHHHHHHH
Confidence 122346899999999999999877655544
No 21
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=51.29 E-value=97 Score=27.00 Aligned_cols=91 Identities=8% Similarity=0.110 Sum_probs=53.8
Q ss_pred ccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCcceEEeccCCCCCCCCCCchhHHHHHHHHHHHH
Q 019888 3 CNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKLTYMQHLDFEPVHADNPGELTAYYKIARHYKWA 82 (334)
Q Consensus 3 ~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk~a 82 (334)
.++| -+.++++++.++.. + +|+|+.| .+++++.++.++ +.-+.... +. ..| .++ ...+
T Consensus 25 ~GkP-li~~~l~~l~~~~~---~--~ivVv~~--~~~i~~~~~~~g-~~v~~~~~-~~-~~G----------t~~-~~~~ 82 (252)
T 3oam_A 25 GGKP-MIQWVYEQAMQAGA---D--RVIIATD--DERVEQAVQAFG-GVVCMTSP-NH-QSG----------TER-LAEV 82 (252)
T ss_dssp TTEE-HHHHHHHHHHHTTC---S--EEEEEES--CHHHHHHHHHTT-CEEEECCT-TC-CSH----------HHH-HHHH
T ss_pred CCEE-HHHHHHHHHHhCCC---C--eEEEECC--HHHHHHHHHHcC-CEEEEcCC-CC-CCc----------HHH-HHHH
Confidence 4566 47899999998752 2 6777776 478888888765 22221111 11 111 111 1224
Q ss_pred HHHHhhhcCccEEEEEccCc-eeChhHHHHHHHHH
Q 019888 83 LDNLFYKHNFSRVIILEDDM-EIAPDFFDYFEAAA 116 (334)
Q Consensus 83 l~~vF~~~~~~~vIiLEDDl-~~sPdFf~y~~~~l 116 (334)
+..+ ...+.+.++++--|. .++|+-+.-+-+.+
T Consensus 83 ~~~l-~~~~~d~vlv~~gD~Pli~~~~i~~l~~~~ 116 (252)
T 3oam_A 83 VAKM-AIPADHIVVNVQGDEPLIPPAIIRQVADNL 116 (252)
T ss_dssp HHHT-TCCTTSEEEECCTTCTTCCHHHHHHHHHHH
T ss_pred HHhc-CcCCCCEEEEEeCCeeecCHHHHHHHHHHH
Confidence 4432 101368999999998 68888876665554
No 22
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=50.75 E-value=99 Score=27.58 Aligned_cols=92 Identities=7% Similarity=0.051 Sum_probs=54.6
Q ss_pred ccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCcceEEeccCCCCCCCCCCchhHHHHHHHHHHHH
Q 019888 3 CNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKLTYMQHLDFEPVHADNPGELTAYYKIARHYKWA 82 (334)
Q Consensus 3 ~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk~a 82 (334)
.++| -+.++++.+.++.- + .|+|+.| .++++++++.++ +.-+.... +. ..| .++ ...|
T Consensus 41 ~GkP-mi~~~l~~l~~~~i---~--~IvV~t~--~~~i~~~~~~~g-~~v~~~~~-~~-~~G----------t~~-i~~~ 98 (264)
T 3k8d_A 41 NGKP-MIVHVLERARESGA---E--RIIVATD--HEDVARAVEAAG-GEVCMTRA-DH-QSG----------TER-LAEV 98 (264)
T ss_dssp TTEE-HHHHHHHHHHHTTC---S--EEEEEES--CHHHHHHHHHTT-CEEEECCT-TC-CSH----------HHH-HHHH
T ss_pred CCeE-HHHHHHHHHHhCCC---C--EEEEECC--HHHHHHHHHHcC-CEEEEecC-CC-CCC----------HHH-HHHH
Confidence 3566 47899999988642 2 6777776 478888888775 22221111 11 111 111 2224
Q ss_pred HHHHhhhcCccEEEEEccCc-eeChhHHHHHHHHHH
Q 019888 83 LDNLFYKHNFSRVIILEDDM-EIAPDFFDYFEAAAD 117 (334)
Q Consensus 83 l~~vF~~~~~~~vIiLEDDl-~~sPdFf~y~~~~l~ 117 (334)
+..+ ...+.+.++++--|. .++|+.++-+-+.+.
T Consensus 99 ~~~l-~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~ 133 (264)
T 3k8d_A 99 VEKC-AFSDDTVIVNVQGDEPMIPATIIRQVADNLA 133 (264)
T ss_dssp HHHH-TCCTTCEEEEECTTCTTCCHHHHHHHHHHHH
T ss_pred HHHh-ccCCCCEEEEEcCCcccCCHHHHHHHHHHHh
Confidence 4433 111368999999998 678988877666553
No 23
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=46.77 E-value=38 Score=32.99 Aligned_cols=107 Identities=9% Similarity=0.029 Sum_probs=59.9
Q ss_pred ccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhh----CC-CcceEEeccCCCCCCCCCCchhHHHHHHH
Q 019888 3 CNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALS----YD-KLTYMQHLDFEPVHADNPGELTAYYKIAR 77 (334)
Q Consensus 3 ~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~----~~-~~~~i~~~~~~~~~~~~~~~~~~y~~ia~ 77 (334)
++|| -|..+|++|.++.. + +|+|..-...+++++.+.. ++ .+..+.+. + .+|.+.
T Consensus 38 ~gkp-~i~~~l~~~~~~g~---~--~i~vv~~~~~~~i~~~~~~~~~~~~~~i~~~~q~---~-~lGTa~---------- 97 (501)
T 3st8_A 38 AGRS-MLSHVLHAIAKLAP---Q--RLIVVLGHDHQRIAPLVGELADTLGRTIDVALQD---R-PLGTGH---------- 97 (501)
T ss_dssp TTEE-HHHHHHHHHHHHCC---S--EEEEEECTTHHHHHHHHHHHHHHHTSCCEEEECS---S-CCCHHH----------
T ss_pred CChh-HHHHHHHHHHhCCC---C--EEEEEeCCCHHHHHHHHHHHHHhcCCcEEEEEcC---C-CCCcHH----------
Confidence 5788 58999999999863 3 4444443334567776643 22 13444332 1 233322
Q ss_pred HHHHHHHHHhhhcC----ccEEEEEccCceeChhHHHHHHHHHHhhcCCCCEEEEeCCCC
Q 019888 78 HYKWALDNLFYKHN----FSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSWND 133 (334)
Q Consensus 78 Hyk~al~~vF~~~~----~~~vIiLEDDl~~sPdFf~y~~~~l~~y~~D~~I~~ISa~nd 133 (334)
||.+..+.++ ...+|+.-|+.++.++.+.-+.+....-..+-+|++...-+.
T Consensus 98 ----Av~~a~~~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~~ti~~~~~~dp 153 (501)
T 3st8_A 98 ----AVLCGLSALPDDYAGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTVLTTTLDDP 153 (501)
T ss_dssp ----HHHHHHTTSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEECSCC
T ss_pred ----HHHHHHHHhccccccceeeecCcceeecHHHHHHHHHHHhhccccceEeeeccCCc
Confidence 5555444332 234555566778888887766665544455556666554443
No 24
>2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens}
Probab=44.51 E-value=1.8e+02 Score=26.19 Aligned_cols=100 Identities=14% Similarity=0.091 Sum_probs=62.0
Q ss_pred cccch---HHHHHHHHHHHhcCCCCCCCccEEEEeCCC--CHHHHHHHhhCCCcceEEeccCC-CCC--CCCCCchhHHH
Q 019888 2 ACNRA---NYLERTINSVFKYQGSVASKYPLFVSQDGS--NPQVKSKALSYDKLTYMQHLDFE-PVH--ADNPGELTAYY 73 (334)
Q Consensus 2 a~NRp---~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~--~~evr~vi~~~~~~~~i~~~~~~-~~~--~~~~~~~~~y~ 73 (334)
||.|| -+|-|+-..|+...+ ..=||.-|++ .+.|+++++.-+ +.+.+..... .+. .+.+...
T Consensus 11 Ty~R~~Q~a~LtRLa~TL~~Vp~-----l~WIVVEd~~~~~~~v~~lL~~sg-l~y~HL~~~~~~~~~~~~~prg~---- 80 (246)
T 2d0j_A 11 TYSRPVQKAELTRLANTFRQVAQ-----LHWILVEDAAARSELVSRFLARAG-LPSTHLHVPTPRRYKRPGLPRAT---- 80 (246)
T ss_dssp ECCSTTHHHHHHHHHHHHTTSTT-----EEEEEEESSSSCCHHHHHHHHHSC-SCEEEEECCCCCC----CCCCCH----
T ss_pred CCCccchhHHHHHHHHHHhcCCc-----eEEEEEcCCCCCCHHHHHHHHHcC-CceEEEecCCccccCCCCCcchH----
Confidence 46665 356788888887653 3667777876 456899998865 5443322211 111 1112221
Q ss_pred HHHHHHHHHHHHHhhhcC-----ccEEEEEccCceeChhHHHHHHH
Q 019888 74 KIARHYKWALDNLFYKHN-----FSRVIILEDDMEIAPDFFDYFEA 114 (334)
Q Consensus 74 ~ia~Hyk~al~~vF~~~~-----~~~vIiLEDDl~~sPdFf~y~~~ 114 (334)
+..+.||.++=++.. .+=|.|-+||..-+-.+|+=|.+
T Consensus 81 ---~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtY~l~LF~emR~ 123 (246)
T 2d0j_A 81 ---EQRNAGLAWLRQRHQHQRAQPGVLFFADDDNTYSLELFQEMRT 123 (246)
T ss_dssp ---HHHHHHHHHHHHHSCSSSCCCCEEEECCTTCEECTHHHHHHTT
T ss_pred ---HHHHHHHHHHHHhcccccCccceEEEccCCCcccHHHHHHHhh
Confidence 234569988866531 36788999999999999876544
No 25
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=38.93 E-value=1.9e+02 Score=25.52 Aligned_cols=91 Identities=13% Similarity=0.160 Sum_probs=53.3
Q ss_pred ccchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCcceEEeccCCCCCCCCCCchhHHHHHHHHHHHH
Q 019888 3 CNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKLTYMQHLDFEPVHADNPGELTAYYKIARHYKWA 82 (334)
Q Consensus 3 ~NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk~a 82 (334)
.++| -+.++++.+.++.- + .|+|+.| .++++++++.++ +.-+... +....| .++ ...|
T Consensus 32 ~GkP-li~~~l~~l~~~~i---~--~VvVvt~--~~~i~~~~~~~g-~~v~~~~--~~~~~G----------t~~-i~~a 89 (256)
T 3tqd_A 32 AGKP-MIQHVYESAIKSGA---E--EVVIATD--DKRIRQVAEDFG-AVVCMTS--SDHQSG----------TER-IAEA 89 (256)
T ss_dssp TTEE-HHHHHHHHHHHTTC---S--EEEEEES--CHHHHHHHHHTT-CEEEECC--TTCCSH----------HHH-HHHH
T ss_pred CCch-HHHHHHHHHHhCCC---C--EEEEECC--HHHHHHHHHHcC-CeEEEeC--CCCCCc----------HHH-HHHH
Confidence 3566 47899999998631 2 5777776 478888888775 2222111 110111 111 1224
Q ss_pred HHHHhhhcCccEEEEEccCc-eeChhHHHHHHHHH
Q 019888 83 LDNLFYKHNFSRVIILEDDM-EIAPDFFDYFEAAA 116 (334)
Q Consensus 83 l~~vF~~~~~~~vIiLEDDl-~~sPdFf~y~~~~l 116 (334)
+..+ ...+.+.++++--|. .++|+.+.-+-+.+
T Consensus 90 ~~~l-~~~~~d~vlv~~gD~Pli~~~~i~~li~~~ 123 (256)
T 3tqd_A 90 AVAL-GFEDDEIIVCLQGDEPLIPPDAIRKLAEDL 123 (256)
T ss_dssp HHHT-TCCTTCEEEEECTTCCCCCHHHHHHHHHHH
T ss_pred HHHh-CcCCCCEEEEEeCCcccCCHHHHHHHHHHH
Confidence 4432 101368999999998 68898887655543
No 26
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=34.17 E-value=88 Score=30.14 Aligned_cols=22 Identities=18% Similarity=0.288 Sum_probs=16.6
Q ss_pred CccEEEEEccCceeChhHH-HHHH
Q 019888 91 NFSRVIILEDDMEIAPDFF-DYFE 113 (334)
Q Consensus 91 ~~~~vIiLEDDl~~sPdFf-~y~~ 113 (334)
..+.|++++-|+ .-|.++ .|.+
T Consensus 160 ~gd~Vv~~DaDl-~iP~~v~~~~k 182 (394)
T 2zu9_A 160 GAEYVGFVDADN-YIPGAVNEYVK 182 (394)
T ss_dssp TCSEEEECCSCB-SCHHHHHHHHH
T ss_pred CCCEEEEEeCCC-CCHHHHHHHHH
Confidence 478999999999 457777 4444
No 27
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=31.91 E-value=1.6e+02 Score=23.95 Aligned_cols=91 Identities=11% Similarity=0.224 Sum_probs=51.9
Q ss_pred cchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhh-CCCcceEEeccCCCCCCCCCCchhHHHHHHHHHHHH
Q 019888 4 NRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALS-YDKLTYMQHLDFEPVHADNPGELTAYYKIARHYKWA 82 (334)
Q Consensus 4 NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~-~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk~a 82 (334)
++|= +.++++.+.+..- + +|+|+.....+++++.+.. +.....+.....+ ..|...++.. |
T Consensus 26 g~pl-i~~~l~~l~~~~~---~--~v~vv~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~g~~~si~~----------a 87 (196)
T 3rsb_A 26 GRCL-IDYVVSPLLKSKV---N--NIFIATSPNTPKTKEYINSAYKDYKNIVVIDTS--GKGYIEDLNE----------C 87 (196)
T ss_dssp TEEH-HHHHHHHHHSSSC---C--CEEEECCTTCHHHHHHHHHHTTTTTEEEE----------CCCCCT----------T
T ss_pred CEEH-HHHHHHHHHHCCC---C--EEEEEeCCChHHHHHHHHhhccCCCCEEEEECC--CCCcHHHHHH----------H
Confidence 4543 6889999988641 2 6777776566778877766 4322222222111 1233333333 4
Q ss_pred HHHHhhhcCccEEEEEccCce-eChhHHHHHHHHHH
Q 019888 83 LDNLFYKHNFSRVIILEDDME-IAPDFFDYFEAAAD 117 (334)
Q Consensus 83 l~~vF~~~~~~~vIiLEDDl~-~sPdFf~y~~~~l~ 117 (334)
+..+ .+.++++--|+- ++|+-+.-+-+...
T Consensus 88 l~~~-----~~~vlv~~~D~P~i~~~~i~~l~~~~~ 118 (196)
T 3rsb_A 88 IGYF-----SEPFLVVSSDLINLKSKIINSIVDYFY 118 (196)
T ss_dssp TTTC-----SSCEEEEETTEESCCHHHHHHHHHHHH
T ss_pred HHhC-----CCCEEEEeCCcccCCHHHHHHHHHHHH
Confidence 4433 478999999984 68888766665543
No 28
>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A*
Probab=29.58 E-value=2.9e+02 Score=24.85 Aligned_cols=100 Identities=18% Similarity=0.186 Sum_probs=61.9
Q ss_pred cccch---HHHHHHHHHHHhcCCCCCCCccEEEEeCCC--CHHHHHHHhhCCCcceEEeccCCC-CCC--------CCCC
Q 019888 2 ACNRA---NYLERTINSVFKYQGSVASKYPLFVSQDGS--NPQVKSKALSYDKLTYMQHLDFEP-VHA--------DNPG 67 (334)
Q Consensus 2 a~NRp---~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~--~~evr~vi~~~~~~~~i~~~~~~~-~~~--------~~~~ 67 (334)
||.|| -+|-|+-..|+...+ ..=||.-|++ ..+|+++++.-+ +.+.+.....+ +.. ..+.
T Consensus 11 Ty~R~~Q~a~LtRLa~TL~~Vp~-----L~WIVVEd~~~~t~~va~lL~~sg-l~y~HL~~~~p~~~~~~~~~~~~~~~r 84 (253)
T 1v84_A 11 TYSRPVQKAELTRMANTLLHVPN-----LHWLVVEDAPRRTPLTARLLRDTG-LNYTHLHVETPRNYKLRGDARDPRIPR 84 (253)
T ss_dssp ECCSTTHHHHHHHHHHHHTTSSS-----EEEEEEESSSSCCHHHHHHHHHHC-CEEEEEECCCCHHHHCC-------CCT
T ss_pred CCCccchhHHHHHHhhhhccCCc-----eEEEEEeCCCCCCHHHHHHHHHcC-CceEEeecCCCccccccccccCccccc
Confidence 45665 356788888876643 3667777865 689999999865 54433222111 100 0111
Q ss_pred chhHHHHHHHHHHHHHHHHhhhc-----CccEEEEEccCceeChhHHHHHHH
Q 019888 68 ELTAYYKIARHYKWALDNLFYKH-----NFSRVIILEDDMEIAPDFFDYFEA 114 (334)
Q Consensus 68 ~~~~y~~ia~Hyk~al~~vF~~~-----~~~~vIiLEDDl~~sPdFf~y~~~ 114 (334)
. .+..+.||.++=+++ ..+=|.|-+||..-+-.+|+=|.+
T Consensus 85 g-------~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtYdl~LF~emR~ 129 (253)
T 1v84_A 85 G-------TMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEMRS 129 (253)
T ss_dssp T-------HHHHHHHHHHHHHHSCSSSCCCEEEEECCTTSEECHHHHHHHHT
T ss_pred h-------HHHHHHHHHHHHHhcccccccceeEEEecCCCcccHHHHHHHhc
Confidence 1 233566999986542 235678899999999999876654
No 29
>3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A*
Probab=27.77 E-value=3.6e+02 Score=24.71 Aligned_cols=105 Identities=17% Similarity=0.164 Sum_probs=60.6
Q ss_pred cccch---HHHHHHHHHHHhcCCCCCCCccEEEEeCCC--CHHHHHHHhhCCCcceEEeccCCC-CCCCCCC---chhHH
Q 019888 2 ACNRA---NYLERTINSVFKYQGSVASKYPLFVSQDGS--NPQVKSKALSYDKLTYMQHLDFEP-VHADNPG---ELTAY 72 (334)
Q Consensus 2 a~NRp---~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~--~~evr~vi~~~~~~~~i~~~~~~~-~~~~~~~---~~~~y 72 (334)
||.|| -+|-|+-..|+...+ ..=||.-|+. .++|+++++.-+ +.+.+.....+ +.....+ -+..
T Consensus 29 Ty~R~~Q~a~LtRLa~TL~~Vp~-----L~WIVVEd~~~~t~~va~lL~rsG-l~y~HL~~~~p~~~~~~~~dp~w~~~- 101 (281)
T 3cu0_A 29 TYARLVQKAELVRLSQTLSLVPR-----LHWLLVEDAEGPTPLVSGLLAASG-LLFTHLVVLTPKAQRLREGEPGWVHP- 101 (281)
T ss_dssp ECCSTTHHHHHHHHHHHHTTSSS-----EEEEEEESSSSCCHHHHHHHHHHC-SEEEEEECCCC-----------CCCC-
T ss_pred CCCCcchhHHHHHHHHHHhcCCc-----eEEEEEcCCCCCCHHHHHHHHHcC-CceEEeccCCCccccccccccccccc-
Confidence 45565 356788888887753 3567777864 689999998865 44433222111 1000000 0000
Q ss_pred HHHHHHHHHHHHHHh--------hhcC-----ccEEEEEccCceeChhHHHHHHH
Q 019888 73 YKIARHYKWALDNLF--------YKHN-----FSRVIILEDDMEIAPDFFDYFEA 114 (334)
Q Consensus 73 ~~ia~Hyk~al~~vF--------~~~~-----~~~vIiLEDDl~~sPdFf~y~~~ 114 (334)
+-....+.||.++= ++++ .+=|.|-+||..-+-.+|+-|.+
T Consensus 102 -rg~~QRN~AL~~Ir~~~~~~~~~~~~~~~~~~GVVyFADDDNtYsl~LFdemR~ 155 (281)
T 3cu0_A 102 -RGVEQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEEMRW 155 (281)
T ss_dssp -CSHHHHHHHHHHHTTCCCEEEECCSCCCTTCCEEEEECCTTSEECHHHHHHHTS
T ss_pred -hhHHHHHHHHHHHHhhccccchhccccccCCceeEEEecCCCcccHHHHHHhhh
Confidence 01223566999996 4432 35678899999999998875543
No 30
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=21.53 E-value=3.7e+02 Score=23.48 Aligned_cols=90 Identities=7% Similarity=0.020 Sum_probs=52.6
Q ss_pred cchHHHHHHH-HHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCcceEEeccCCCCCCCCCCchhHHHHHHHHHHHH
Q 019888 4 NRANYLERTI-NSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKLTYMQHLDFEPVHADNPGELTAYYKIARHYKWA 82 (334)
Q Consensus 4 NRp~~l~r~L-~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk~a 82 (334)
++|= +.+++ +++++.. .+ .|+|+.| .+++.++++.++ +.-+.... ....|. .+++. |
T Consensus 25 GkPl-i~~~i~~~~~~~~---~~--~vvVvt~--~~~i~~~~~~~g-~~v~~~~~--~~~~Gt-------~~i~~----a 82 (253)
T 4fcu_A 25 DRPM-ILRVVDQAKKVEG---FD--DLCVATD--DERIAEICRAEG-VDVVLTSA--DHPSGT-------DRLSE----V 82 (253)
T ss_dssp TEEH-HHHHHHHHHTCTT---CC--EEEEEES--CHHHHHHHHTTT-CCEEECCT--TCCCHH-------HHHHH----H
T ss_pred CeEh-HHHHHHHHHHhcC---CC--EEEEECC--HHHHHHHHHHcC-CeEEEeCC--CCCChH-------HHHHH----H
Confidence 4554 68889 8887753 12 6788876 478888888765 22222111 101111 12222 4
Q ss_pred HHHHhhhcCccEEEEEccCc-eeChhHHHHHHHHH
Q 019888 83 LDNLFYKHNFSRVIILEDDM-EIAPDFFDYFEAAA 116 (334)
Q Consensus 83 l~~vF~~~~~~~vIiLEDDl-~~sPdFf~y~~~~l 116 (334)
+..+ ...+.+.++++--|. .++|+-++-+-+.+
T Consensus 83 ~~~~-~~~~~d~vlv~~gD~Pli~~~~i~~li~~~ 116 (253)
T 4fcu_A 83 ARIK-GWDADDIIVNVQGDEPLLPAQLVQQVAKLL 116 (253)
T ss_dssp HHHH-TCCTTCEEEECCTTCTTCCHHHHHHHHHHH
T ss_pred HHhc-CcCCCCEEEEEeCCcccCCHHHHHHHHHHH
Confidence 4443 111368999999999 78898887665544
No 31
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=20.43 E-value=3.3e+02 Score=21.76 Aligned_cols=90 Identities=16% Similarity=0.109 Sum_probs=49.3
Q ss_pred cchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCcceEEeccCCCCCCCCCCchhHHHHHHHHHHHHH
Q 019888 4 NRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKLTYMQHLDFEPVHADNPGELTAYYKIARHYKWAL 83 (334)
Q Consensus 4 NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk~al 83 (334)
++| -+.++++.+.+... + +|+|+.+...+++++.+..++ +..+... +. ..|...++.. |+
T Consensus 30 g~p-li~~~l~~l~~~~~---~--~i~vv~~~~~~~~~~~~~~~~-~~~~~~~--~~-~~g~~~~i~~----------al 89 (199)
T 2waw_A 30 DTT-LLGATLAMARRCPF---D--QLIVTLGGAADEVLEKVELDG-LDIVLVD--DA-GLGCSSSLKS----------AL 89 (199)
T ss_dssp TEE-HHHHHHHHHHTSSC---S--EEEEEECTTHHHHHHHSCCTT-SEEEECC--CC-CTTCCCHHHH----------HH
T ss_pred ccC-HHHHHHHHHHhCCC---C--cEEEEeCCCHHHHHHHhccCC-CEEEECC--Cc-ccCHHHHHHH----------HH
Confidence 344 36889999987642 2 577776655456666555443 3222211 11 1233233322 44
Q ss_pred HHHhhhcCccEEEEEccCce-eChhHHHHHHHH
Q 019888 84 DNLFYKHNFSRVIILEDDME-IAPDFFDYFEAA 115 (334)
Q Consensus 84 ~~vF~~~~~~~vIiLEDDl~-~sPdFf~y~~~~ 115 (334)
..+-. +.+.++|+--|+. ++++-+.-+-+.
T Consensus 90 ~~~~~--~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (199)
T 2waw_A 90 TWVDP--TAEGIVLMLGDQPGITASAVASLIAG 120 (199)
T ss_dssp HTSCT--TCSEEEEEETTCTTCCHHHHHHHHHH
T ss_pred Hhhhc--cCCeEEEEeCCcccCCHHHHHHHHhh
Confidence 43311 3688999999986 578776655443
No 32
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=20.16 E-value=3.4e+02 Score=21.73 Aligned_cols=88 Identities=10% Similarity=0.122 Sum_probs=47.4
Q ss_pred cchHHHHHHHHHHHhcCCCCCCCccEEEEeCCCCHHHHHHHhhCCCcceEEeccCCCCCCCCCCchhHHHHHHHHHHHHH
Q 019888 4 NRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKLTYMQHLDFEPVHADNPGELTAYYKIARHYKWAL 83 (334)
Q Consensus 4 NRp~~l~r~L~sL~~~~~~~~~~~~l~Is~Dg~~~evr~vi~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~ia~Hyk~al 83 (334)
++| -+.++++.+.+... + +|+|......+++++.+..++ +..+... +. ..|... ++
T Consensus 30 g~p-ll~~~l~~l~~~~~---~--~i~vv~~~~~~~~~~~~~~~~-~~~~~~~--~~-~~g~~~--------------~i 85 (197)
T 2wee_A 30 DTT-VLGATLDVARQAGF---D--QLILTLGGAASAVRAAMALDG-TDVVVVE--DV-ERGCAA--------------SL 85 (197)
T ss_dssp TEE-HHHHHHHHHHHTTC---S--EEEEEECTTHHHHHHHSCCTT-SEEEECC-------CCHH--------------HH
T ss_pred Ccc-HHHHHHHHHHhcCC---C--cEEEEeCCCHHHHHHHhccCC-CEEEECC--Cc-ccCHHH--------------HH
Confidence 344 36889999987641 2 566666544455555554432 3222211 11 112111 33
Q ss_pred HHHhhhc--CccEEEEEccCc-eeChhHHHHHHHH
Q 019888 84 DNLFYKH--NFSRVIILEDDM-EIAPDFFDYFEAA 115 (334)
Q Consensus 84 ~~vF~~~--~~~~vIiLEDDl-~~sPdFf~y~~~~ 115 (334)
....+.. +.+.++|+--|+ .++++-+.-+-+.
T Consensus 86 ~~al~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (197)
T 2wee_A 86 RVALARVHPRATGIVLMLGDQPQVAPATLRRIIDV 120 (197)
T ss_dssp HHHHTTSCTTEEEEEEEETTCTTCCHHHHHHHHHH
T ss_pred HHHHHHhcccCCeEEEEeCCcCCCCHHHHHHHHhh
Confidence 3333332 367899999999 5788877665554
Done!