BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019889
(334 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE
COMPLEXED With Zn2+
Length = 304
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 119/246 (48%), Gaps = 54/246 (21%)
Query: 89 RCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPRELLDVKAA-----KKAILDGFRKTD 143
+C+ FA++DGHGG A+Y LH LP L V+A +KA+ + F D
Sbjct: 50 QCSFFAVYDGHGGAEVAQYCS--LH-------LPTFLKTVEAYGRKEFEKALKEAFLGFD 100
Query: 144 ESLLQESV-------SG---------GWQDGATAVCIWILGRTVFVANIGDAKAVVARSS 187
+LLQE V SG G G TAV + G+ ++VAN GD++ VV R+
Sbjct: 101 ATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNG 160
Query: 188 IVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGD 247
KA+ ++ HK E RI+K+GG V+ +GR+ G L +SRA GD
Sbjct: 161 ---------------KALEMSFDHKPEDTVEYQRIEKAGGRVTLDGRVNGGLNLSRAIGD 205
Query: 248 RQFK--------KFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQ-KLLK 298
+K + + A PDI V D F++L CDG+W V+FVQ ++ K
Sbjct: 206 HGYKMNKSLPAEEQMISALPDIEKITVGPEDEFMVLACDGIWNFMTSEQVVQFVQERINK 265
Query: 299 EGLSVT 304
G+ ++
Sbjct: 266 PGMKLS 271
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 3 Mm Of Mn2+
pdb|3FXK|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 10 Mm Of Mn2+
pdb|3FXL|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 1 Mm Of Mn2+
pdb|3FXM|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 10 Mm Of Mn2+
pdb|3FXO|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 1 Mm Of Mn2+
Length = 390
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 106/224 (47%), Gaps = 38/224 (16%)
Query: 93 FAIFDGHGGRLAAEYAQKRLHANVI-------SAGLPRELLDVKAAKKAILDGFRKTDES 145
FA++DGH G A+Y + L ++ SAG P V+ K I GF + DE
Sbjct: 56 FAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAP----SVENVKNGIRTGFLEIDEH 111
Query: 146 L--LQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLK 203
+ + E G + G+TAV + I + + N GD++ ++ R+ K
Sbjct: 112 MRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNR---------------K 156
Query: 204 AIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFG--------V 255
T+ HK P E+ RIQ +GG+V R+ G L VSRA GD +K V
Sbjct: 157 VHFFTQDHKPSNPLEKERIQNAGGSVMIQ-RVNGSLAVSRALGDFDYKCVHGKGPTEQLV 215
Query: 256 VATPDIHSFEVTERD-HFIILGCDGLWGVFGPSDAVEFVQKLLK 298
P++H E +E D FIIL CDG+W V G + +FV+ L+
Sbjct: 216 SPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLE 259
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE
PHOSPHATASE 2C AT 2 A Resolution
Length = 382
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 106/224 (47%), Gaps = 38/224 (16%)
Query: 93 FAIFDGHGGRLAAEYAQKRLHANVI-------SAGLPRELLDVKAAKKAILDGFRKTDES 145
FA++DGH G A+Y + L ++ SAG P V+ K I GF + DE
Sbjct: 56 FAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAP----SVENVKNGIRTGFLEIDEH 111
Query: 146 L--LQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLK 203
+ + E G + G+TAV + I + + N GD++ ++ R+ K
Sbjct: 112 MRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNR---------------K 156
Query: 204 AIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFG--------V 255
T+ HK P E+ RIQ +GG+V R+ G L VSRA GD +K V
Sbjct: 157 VHFFTQDHKPSNPLEKERIQNAGGSVMIQ-RVNGSLAVSRALGDFDYKCVHGKGPTEQLV 215
Query: 256 VATPDIHSFEVTERD-HFIILGCDGLWGVFGPSDAVEFVQKLLK 298
P++H E +E D FIIL CDG+W V G + +FV+ L+
Sbjct: 216 SPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLE 259
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
pdb|2P8E|B Chain B, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
Length = 307
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 104/225 (46%), Gaps = 36/225 (16%)
Query: 93 FAIFDGHGGRLAAEYAQKRLHANVIS---------AGLPRELLDVKAAKKAILDGFRKTD 143
FA++DGH G A Y L ++ + +G EL V+ K I GF K D
Sbjct: 58 FAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALEL-SVENVKNGIRTGFLKID 116
Query: 144 ESL--LQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSS 201
E + + +G + G+TAV + I + ++ N GD++AV+ R+
Sbjct: 117 EYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNG-------------- 162
Query: 202 LKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFG------- 254
+ T+ HK P+E+ RIQ +GG+V R+ G L VSRA GD +K
Sbjct: 163 -QVCFSTQDHKPCNPREKERIQNAGGSVMIQ-RVNGSLAVSRALGDYDYKCVDGKGPTEQ 220
Query: 255 -VVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLK 298
V P+++ E D FIIL DG+W V + E+V+ L+
Sbjct: 221 LVSPEPEVYEILRAEEDEFIILAXDGIWDVMSNEELCEYVKSRLE 265
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
pdb|3NMN|D Chain D, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
Length = 319
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 107/215 (49%), Gaps = 35/215 (16%)
Query: 93 FAIFDGHGGRLAAEYAQKRLH---ANVISAGLPRELLD----VKAAKKAILDGFRKTD-- 143
F ++DGHGG A Y ++R+H A I+ P L D ++ KKA+ + F + D
Sbjct: 58 FGVYDGHGGSQVANYCRERMHLALAEEIAKEKPM-LCDGDTWLEKWKKALFNSFLRVDSE 116
Query: 144 -ESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSL 202
ES+ E+V G+T+V + +FVAN GD++AV+ R
Sbjct: 117 IESVAPETV------GSTSVVAVVFPSHIFVANCGDSRAVLCRGKT-------------- 156
Query: 203 KAIVVTRVHKAIYPQERARIQKSGGTV-SSNG-RLQGRLEVSRAFGDRQFKKFGVVATPD 260
A+ ++ HK E ARI+ +GG V NG R+ G L +SR+ GDR K ++ P+
Sbjct: 157 -ALPLSVDHKPDREDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKP-SIIPDPE 214
Query: 261 IHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQK 295
+ + + + D +IL DG+W V +A E +K
Sbjct: 215 VTAVKRVKEDDCLILASDGVWDVMTDEEACEMARK 249
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With
Abi1
Length = 326
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 107/215 (49%), Gaps = 35/215 (16%)
Query: 93 FAIFDGHGGRLAAEYAQKRLH---ANVISAGLPRELLD----VKAAKKAILDGFRKTD-- 143
F ++DGHGG A Y ++R+H A I+ P L D ++ KKA+ + F + D
Sbjct: 70 FGVYDGHGGSQVANYCRERMHLALAEEIAKEKPM-LCDGDTWLEKWKKALFNSFLRVDSE 128
Query: 144 -ESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSL 202
ES+ E+V G+T+V + +FVAN GD++AV+ R
Sbjct: 129 IESVAPETV------GSTSVVAVVFPSHIFVANCGDSRAVLCRGKT-------------- 168
Query: 203 KAIVVTRVHKAIYPQERARIQKSGGTV-SSNG-RLQGRLEVSRAFGDRQFKKFGVVATPD 260
A+ ++ HK E ARI+ +GG V NG R+ G L +SR+ GDR K ++ P+
Sbjct: 169 -ALPLSVDHKPDREDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKP-SIIPDPE 226
Query: 261 IHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQK 295
+ + + + D +IL DG+W V +A E +K
Sbjct: 227 VTAVKRVKEDDCLILASDGVWDVMTDEEACEMARK 261
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1
Length = 316
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 107/215 (49%), Gaps = 35/215 (16%)
Query: 93 FAIFDGHGGRLAAEYAQKRLH---ANVISAGLPRELLD----VKAAKKAILDGFRKTD-- 143
F ++DGHGG A Y ++R+H A I+ P L D ++ KKA+ + F + D
Sbjct: 55 FGVYDGHGGSQVANYCRERMHLALAEEIAKEKPM-LSDGDTWLEKWKKALFNSFLRVDSE 113
Query: 144 -ESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSL 202
ES+ E+V G+T+V + +FVAN GD++AV+ R
Sbjct: 114 IESVAPETV------GSTSVVAVVFPSHIFVANCGDSRAVLCRGKT-------------- 153
Query: 203 KAIVVTRVHKAIYPQERARIQKSGGTV-SSNG-RLQGRLEVSRAFGDRQFKKFGVVATPD 260
A+ ++ HK E ARI+ +GG V NG R+ G L +SR+ GDR K ++ P+
Sbjct: 154 -ALPLSVDHKPDREDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKP-SIIPDPE 211
Query: 261 IHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQK 295
+ + + + D +IL DG+W V +A E +K
Sbjct: 212 VTAVKRVKEDDCLILASDGVWDVMTDEEACEMARK 246
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
pdb|3UJK|A Chain A, Crystal Structure Of Protein Phosphatase Abi2
pdb|3UJL|B Chain B, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 324
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 103/224 (45%), Gaps = 37/224 (16%)
Query: 86 PNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPRELLDVKAA-----------KKA 134
P+L F ++DGHGG A Y ++R+H L E++ K KKA
Sbjct: 55 PHLSAHFFGVYDGHGGSQVANYCRERMH-----LALTEEIVKEKPEFCDGDTWQEKWKKA 109
Query: 135 ILDGFRKTDESLLQESVSGGWQD-GATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSN 193
+ + F + D + E+V+ + G+T+V + +FVAN GD++AV+ R
Sbjct: 110 LFNSFMRVDSEI--ETVAHAPETVGSTSVVAVVFPTHIFVANCGDSRAVLCRGKT----- 162
Query: 194 NHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTV--SSNGRLQGRLEVSRAFGDRQFK 251
+ ++ HK E ARI+ +GG V + R+ G L +SR+ GDR K
Sbjct: 163 ----------PLALSVDHKPDRDDEAARIEAAGGKVIRWNGARVFGVLAMSRSIGDRYLK 212
Query: 252 KFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQK 295
V+ P++ S + D +IL DGLW V + + +K
Sbjct: 213 P-SVIPDPEVTSVRRVKEDDCLILASDGLWDVMTNEEVCDLARK 255
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|B Chain B, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|C Chain C, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
Length = 324
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 115/281 (40%), Gaps = 50/281 (17%)
Query: 90 CAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPRELL-----DVKAAK----------KA 134
CA F +FDG G A+E + + +IS+ +E+ DV A + +A
Sbjct: 53 CAFFGVFDGTVGDFASENVKDLVVPQLISSPAWQEVTEXLRSDVPATEVDEKLPQLLDQA 112
Query: 135 ILDGFRKTDESLLQ--ESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGS 192
+ D ++ D L++ E ++ + + + G V V ++GD++ I G
Sbjct: 113 VDDXYKNADNELVKXCEQLNKDYASSTSVTAVLAKG-FVAVGHLGDSR-------IAXG- 163
Query: 193 NNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVS--------------------SN 232
++ + L +T HK P E+ RI ++GG+V S
Sbjct: 164 ---VETPNGLNCEFLTVDHKPDXPHEKLRIXRNGGSVEYLHNHNNKPFIRGGDFSFRKSR 220
Query: 233 GRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEF 292
G +L+ SRAFG + K +G+ PD+ VT + IL DGLW V + AVE
Sbjct: 221 GEQPXQLQYSRAFGGKDLKXYGLSNQPDVRVVRVTPQHRVXILATDGLWDVXSAAQAVEI 280
Query: 293 VQKLLKEGLS-VTXXXXXXXXXXXXXXXCKDNCTAIVIIFR 332
+ +EG + DN TA + F+
Sbjct: 281 AXQARQEGRNPAQALVEXTLAEQQSRNQSADNITAXTVFFK 321
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 343
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 100/233 (42%), Gaps = 52/233 (22%)
Query: 93 FAIFDGHGGRLAAEYAQKRLHANVI-------------SAGLPREL----------LDVK 129
F ++DGHGG A+Y + RLH + + G R++ L V
Sbjct: 71 FGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVD 130
Query: 130 A-----AKKAILDGFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVA 184
+A++ K E++ E+V G+TAV + + V+N GD++AV+
Sbjct: 131 GEIEGKIGRAVVGSSDKVLEAVASETV------GSTAVVALVCSSHIVVSNCGDSRAVLF 184
Query: 185 RSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTV--SSNGRLQGRLEVS 242
R +A+ ++ HK E ARI+ +GG V R+ G L +S
Sbjct: 185 RGK---------------EAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMS 229
Query: 243 RAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQK 295
R+ GDR K + V+ P++ + D +IL DGLW V + E ++
Sbjct: 230 RSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARR 281
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 100/233 (42%), Gaps = 52/233 (22%)
Query: 93 FAIFDGHGGRLAAEYAQKRLHANVI-------------SAGLPREL----------LDVK 129
F ++DGHGG A+Y + RLH + + G R++ L V
Sbjct: 78 FGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVD 137
Query: 130 A-----AKKAILDGFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVA 184
+A++ K E++ E+V G+TAV + + V+N GD++AV+
Sbjct: 138 GEIEGKIGRAVVGSSDKVLEAVASETV------GSTAVVALVCSSHIVVSNCGDSRAVLF 191
Query: 185 RSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTV--SSNGRLQGRLEVS 242
R +A+ ++ HK E ARI+ +GG V R+ G L +S
Sbjct: 192 RGK---------------EAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMS 236
Query: 243 RAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQK 295
R+ GDR K + V+ P++ + D +IL DGLW V + E ++
Sbjct: 237 RSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARR 288
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 321
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 100/233 (42%), Gaps = 52/233 (22%)
Query: 93 FAIFDGHGGRLAAEYAQKRLHANVI-------------SAGLPREL----------LDVK 129
F ++DGHGG A+Y + RLH + + G R++ L V
Sbjct: 54 FGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVD 113
Query: 130 A-----AKKAILDGFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVA 184
+A++ K E++ E+V G+TAV + + V+N GD++AV+
Sbjct: 114 GEIEGKIGRAVVGSSDKVLEAVASETV------GSTAVVALVCSSHIVVSNCGDSRAVLF 167
Query: 185 RSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTV--SSNGRLQGRLEVS 242
R +A+ ++ HK E ARI+ +GG V R+ G L +S
Sbjct: 168 RGK---------------EAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMS 212
Query: 243 RAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQK 295
R+ GDR K + V+ P++ + D +IL DGLW V + E ++
Sbjct: 213 RSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARR 264
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In
Complex With The Hab1 Type 2c Phosphatase Catalytic
Domain
pdb|3ZVU|B Chain B, Structure Of The Pyr1 His60pro Mutant In Complex With The
Hab1 Phosphatase And Abscisic Acid
Length = 337
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 100/233 (42%), Gaps = 52/233 (22%)
Query: 93 FAIFDGHGGRLAAEYAQKRLHANVI-------------SAGLPREL----------LDVK 129
F ++DGHGG A+Y + RLH + + G R++ L V
Sbjct: 65 FGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVD 124
Query: 130 A-----AKKAILDGFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVA 184
+A++ K E++ E+V G+TAV + + V+N GD++AV+
Sbjct: 125 GEIEGKIGRAVVGSSDKVLEAVASETV------GSTAVVALVCSSHIVVSNCGDSRAVLF 178
Query: 185 RSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTV--SSNGRLQGRLEVS 242
R +A+ ++ HK E ARI+ +GG V R+ G L +S
Sbjct: 179 RGK---------------EAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMS 223
Query: 243 RAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQK 295
R+ GDR K + V+ P++ + D +IL DGLW V + E ++
Sbjct: 224 RSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARR 275
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
Length = 341
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 100/233 (42%), Gaps = 52/233 (22%)
Query: 93 FAIFDGHGGRLAAEYAQKRLHANVI-------------SAGLPREL----------LDVK 129
F ++DGHGG A+Y + RLH + + G R++ L V
Sbjct: 69 FGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVD 128
Query: 130 A-----AKKAILDGFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVA 184
+A++ K E++ E+V G+TAV + + V+N GD++AV+
Sbjct: 129 GEIEGKIGRAVVGSSDKVLEAVASETV------GSTAVVALVCSSHIVVSNCGDSRAVLF 182
Query: 185 RSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTV--SSNGRLQGRLEVS 242
R +A+ ++ HK E ARI+ +GG V R+ G L +S
Sbjct: 183 RGK---------------EAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMS 227
Query: 243 RAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQK 295
R+ GDR K + V+ P++ + D +IL DGLW V + E ++
Sbjct: 228 RSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARR 279
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid
Dehydrogenase Phosphatase With Mg (Ii) Ions At The
Active Site
Length = 389
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 106/250 (42%), Gaps = 35/250 (14%)
Query: 92 HFAIFDGHGGRLAAEYAQKRLHANVISAGLPRELLDVKAAKKAILDGFRKTDESLLQE-- 149
+FA++DGHGG AA++ + ++ LP+E K + + F + D++
Sbjct: 151 YFAVYDGHGGPAAADFCHTHMEKCIMDL-LPKE----KNLETLLTLAFLEIDKAFSSHAR 205
Query: 150 -SVSGGWQDGATAVCIWIL--GRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIV 206
S T + +L G + VA++GD++A++ R K +
Sbjct: 206 LSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKG---------------KPMK 250
Query: 207 VTRVHKAIYPQERARIQKSGGTVSSNG----RLQGRLEVSRAFGDRQFKKFGVVATPDIH 262
+T H E+ RI+K GG V+ N + GRL ++R+ GD K GV+A P+
Sbjct: 251 LTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETK 310
Query: 263 SFEVTER-DHFIILGCDGLWGVFGPSDAVEFVQKLLKEGLSVTXXXXXXXXXXXXXXXCK 321
++ D F++L DG+ + + +FV + +
Sbjct: 311 RIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPN-----EAAHAVTEQAIQYGTE 365
Query: 322 DNCTAIVIIF 331
DN TA+V+ F
Sbjct: 366 DNSTAVVVPF 375
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
pdb|3RT0|B Chain B, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
Length = 340
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 100/233 (42%), Gaps = 52/233 (22%)
Query: 93 FAIFDGHGGRLAAEYAQKRLHANVI-------------SAGLPREL----------LDVK 129
F ++DGHGG A+Y + RLH + + G R++ L V
Sbjct: 68 FGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELSKRNTGEGRQVQWDKVFTSCFLTVD 127
Query: 130 A-----AKKAILDGFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVA 184
+A++ K E++ E+V G+TAV + + V+N GD++AV+
Sbjct: 128 GEIEGKIGRAVVGSSDKVLEAVASETV------GSTAVVALVCSSHIVVSNCGDSRAVLF 181
Query: 185 RSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTV--SSNGRLQGRLEVS 242
R +A+ ++ HK E ARI+ +GG V R+ G L +S
Sbjct: 182 RGK---------------EAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMS 226
Query: 243 RAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQK 295
R+ GDR K + V+ P++ + D +IL DGLW V + E ++
Sbjct: 227 RSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARR 278
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k
Length = 274
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 30/214 (14%)
Query: 92 HFAIFDGHGGRLAAEYAQKRLHANVISAGLPRELLDVKAAKKAILDGFRKTDESLLQE-- 149
+FA++DGHGG AA++ + ++ LP+E K + + F + D++
Sbjct: 37 YFAVYDGHGGPAAADFCHTHMEKCIMDL-LPKE----KNLETLLTLAFLEIDKAFSSHAR 91
Query: 150 -SVSGGWQDGATAVCIWIL--GRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIV 206
S T + +L G + VA++GD++A++ R K +
Sbjct: 92 LSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKG---------------KPMK 136
Query: 207 VTRVHKAIYPQERARIQKSGGTVSSNG----RLQGRLEVSRAFGDRQFKKFGVVATPDIH 262
+T H E+ RI+K GG V+ N + GRL ++R+ GD K GV+A P+
Sbjct: 137 LTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETK 196
Query: 263 SFEVTER-DHFIILGCDGLWGVFGPSDAVEFVQK 295
++ D F++L DG+ + + +FV +
Sbjct: 197 RIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQ 230
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
pdb|2ISN|B Chain B, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
Length = 364
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 59/121 (48%), Gaps = 25/121 (20%)
Query: 171 VFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVS 230
V NIGD++A + S DG L ++ HK +P E +RI+K+GG+V
Sbjct: 175 VTAINIGDSRATLIHS---DGGLTRL-----------SKDHKPNHPTEASRIEKAGGSVE 220
Query: 231 S--NGRLQGRLEVSRAFGDRQFKKFG--------VVATPDIHSFEVTERDHFIILGCDGL 280
+ R+ G L +SRAFGD FK V+A PD+ F ++L CDG+
Sbjct: 221 TFDVPRVDGVLALSRAFGDSDFKXNPNLPPEEQKVIAVPDVRQF-YALSSDLLLLACDGV 279
Query: 281 W 281
+
Sbjct: 280 Y 280
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
pdb|2PNQ|B Chain B, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
Length = 467
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 88/231 (38%), Gaps = 66/231 (28%)
Query: 123 RELLDVKAA-------KKAILDGFRKTDESLLQESVSGGWQD------------GATAVC 163
+EL+D+ K+A+++ F++ D + E+ G GATA
Sbjct: 146 QELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSGATACV 205
Query: 164 IWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQ 223
+ G + VAN GD++A++ +E S A+ ++ H A +E R++
Sbjct: 206 AHVDGVDLHVANTGDSRAMLGVQ----------EEDGSWSAVTLSNDHNAQNERELQRLK 255
Query: 224 -----KSGGTVSSNGRLQGRLEVSRAFGDRQFK-----------------------KF-- 253
+V RL G L RAFGD +FK KF
Sbjct: 256 LEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIP 315
Query: 254 -------GVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLL 297
+ A P++ + +D F++L DGLW D V V + L
Sbjct: 316 PNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYL 366
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c
pdb|3N3C|A Chain A, Crystal Structure Of Native Bovine Pdp1c
Length = 467
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 88/231 (38%), Gaps = 66/231 (28%)
Query: 123 RELLDVKA-------AKKAILDGFRKTDESLLQESVSGGWQD------------GATAVC 163
+EL+D+ K+A+++ F++ D + E+ G GATA
Sbjct: 146 QELIDLNTGESTDIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSGATACV 205
Query: 164 IWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQ 223
+ G + VAN GD++A++ +E S A+ ++ H A +E R++
Sbjct: 206 AHVDGVDLHVANTGDSRAMLGVQ----------EEDGSWSAVTLSNDHNAQNEREVERLK 255
Query: 224 -----KSGGTVSSNGRLQGRLEVSRAFGDRQFK-----------------------KF-- 253
+V RL G L RAFGD +FK KF
Sbjct: 256 LEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIP 315
Query: 254 -------GVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLL 297
+ A P++ + +D F++L DGLW D V V + L
Sbjct: 316 PNYYTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYL 366
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex
pdb|2POP|C Chain C, The Crystal Structure Of Tab1 And Bir1 Complex
Length = 353
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 97/240 (40%), Gaps = 55/240 (22%)
Query: 90 CAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPRELLDVKAAKKAILDGFRKTDESLLQE 149
C + +F+G+ G + +RL A ++ L E + ++ +L F + S L E
Sbjct: 64 CFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEADV-RRVLLQAFDVVERSFL-E 121
Query: 150 SVSGGWQD------------------GATAVCIWILGRTVFVANIGDAKAVVARSSIVDG 191
S+ + GA AV +L ++VAN+G +A++ +S+ VDG
Sbjct: 122 SIDDALAEKASLQLERLKTLEREISGGAMAVVAVLLNNKLYVANVGTNRALLCKST-VDG 180
Query: 192 SNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSG---GTVSSNGRLQGRLEVSRAFGDR 248
L+ + H E R+ + G G + G + G+ E +R GD
Sbjct: 181 ----------LQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQVGIICGQ-ESTRRIGDY 229
Query: 249 QFKKFG--------------VVATPDIHSFEVTER-DHFIILGCDGLWGVF----GPSDA 289
+ K+G ++A P+IH + + F++L +GL+ GP A
Sbjct: 230 KV-KYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPGQA 288
>pdb|3D8K|A Chain A, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|B Chain B, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|C Chain C, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|D Chain D, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
Length = 377
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 27/126 (21%)
Query: 170 TVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTV 229
T+ VA++G+++ V+ S AI ++ H A +ER R+Q +GG
Sbjct: 167 TIHVASLGNSRCVLK---------------SGRTAIHLSTPHTASSHKERHRVQAAGGVF 211
Query: 230 SS-NGRL--QGRLEVSRAFGDRQFKKFG--------VVATPDIHSFEVTERDHFIILGCD 278
++ NG L G + +RAFG FKK G V A PD+ +F D I+ G
Sbjct: 212 TTVNGELLLGGVVPXTRAFGSFDFKKGGQGKLQQDLVSAVPDVTTFFAYPGDD-IVAGTA 270
Query: 279 GLWGVF 284
G + F
Sbjct: 271 GAFAHF 276
>pdb|2POM|A Chain A, Tab1 With Manganese Ion
Length = 372
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 105/261 (40%), Gaps = 78/261 (29%)
Query: 90 CAHFAIFDGHGG---------RLAAEYAQKRLHANVISAGLPRELL-------------- 126
C + +F+G+ G RL+AE +L+A A + R LL
Sbjct: 64 CFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVVERSFLESI 123
Query: 127 DVKAAKKAILDG--------------FRKTDESL--LQESVSGGWQDGATAVCIWILGRT 170
D A+KA L ++K E L L+ +SGG A AV +L
Sbjct: 124 DDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGG----AMAVVAVLLNNK 179
Query: 171 VFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSG---G 227
++VAN+G +A++ +S+ VDG L+ + H E R+ + G G
Sbjct: 180 LYVANVGTNRALLCKST-VDG----------LQVTQLNVDHTTENEDELFRLSQLGLDAG 228
Query: 228 TVSSNGRLQGRLEVSRAFGDRQFKKFG--------------VVATPDIHSFEVTER-DHF 272
+ G + G+ E +R GD + K+G ++A P+IH + + F
Sbjct: 229 KIKQVGIICGQ-ESTRRIGDYKV-KYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGF 286
Query: 273 IILGCDGLWGVF----GPSDA 289
++L +GL+ GP A
Sbjct: 287 LVLMSEGLYKALEAAHGPGQA 307
>pdb|2J4O|A Chain A, Structure Of Tab1
Length = 401
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 109/269 (40%), Gaps = 78/269 (28%)
Query: 90 CAHFAIFDGHGG---------RLAAEYAQKRLHANVISAGLPRELL-------------- 126
C + +F+G+ G RL+AE +L+A A + R LL
Sbjct: 62 CFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVVERSFLESI 121
Query: 127 DVKAAKKAILDG--------------FRKTDESL--LQESVSGGWQDGATAVCIWILGRT 170
D A+KA L ++K E L L+ +SGG A AV +L
Sbjct: 122 DDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGG----AMAVVAVLLNNK 177
Query: 171 VFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSG---G 227
++VAN+G +A++ +S+ VDG L+ + H E R+ + G G
Sbjct: 178 LYVANVGTNRALLCKST-VDG----------LQVTQLNVDHTTENEDELFRLSQLGLDAG 226
Query: 228 TVSSNGRLQGRLEVSRAFGDRQFKKFG--------------VVATPDIHSFEVTER-DHF 272
+ G + G+ E +R GD + K+G ++A P+IH + + F
Sbjct: 227 KIKQVGIICGQ-ESTRRIGDYKV-KYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGF 284
Query: 273 IILGCDGLWGVF----GPSDAVEFVQKLL 297
++L +GL+ GP A + + ++
Sbjct: 285 LVLMSEGLYKALEAAHGPGQANQEIAAMI 313
>pdb|1YEN|B Chain B, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betap36a Oxy (2mm Ihp, 20% Peg) (10 Test Sets)
pdb|1YEN|D Chain D, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betap36a Oxy (2mm Ihp, 20% Peg) (10 Test Sets)
pdb|1Y45|B Chain B, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betap36a Deoxy Low-Salt (10 Test Sets)
pdb|1Y45|D Chain D, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betap36a Deoxy Low-Salt (10 Test Sets)
Length = 146
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 214 IYPQERARIQKSGGTVSSN---GRLQGRLEVSRAFGDRQFKKFGVVATPD 260
+ P+E++ + G V+ + G GRL V A+ R F+ FG ++TPD
Sbjct: 3 LTPEEKSAVTALWGKVNVDEVGGEALGRLLVVYAWTQRFFESFGDLSTPD 52
>pdb|1NQP|B Chain B, Crystal Structure Of Human Hemoglobin E At 1.73 A
Resolution
pdb|1NQP|D Chain D, Crystal Structure Of Human Hemoglobin E At 1.73 A
Resolution
pdb|1YVQ|B Chain B, The Low Salt (Peg) Crystal Structure Of Co Hemoglobin E
(Betae26k) Approaching Physiological Ph (Ph 7.5)
pdb|1YVQ|D Chain D, The Low Salt (Peg) Crystal Structure Of Co Hemoglobin E
(Betae26k) Approaching Physiological Ph (Ph 7.5)
pdb|1YVT|B Chain B, The High Salt (Phosphate) Crystal Structure Of Co
Hemoglobin E (Glu26lys) At Physiological Ph (Ph 7.35)
pdb|3DUT|B Chain B, The High Salt (Phosphate) Crystal Structure Of Deoxy
Hemoglobin E (Glu26lys) At Physiological Ph (Ph 7.35)
pdb|3DUT|D Chain D, The High Salt (Phosphate) Crystal Structure Of Deoxy
Hemoglobin E (Glu26lys) At Physiological Ph (Ph 7.35)
Length = 146
Score = 31.2 bits (69), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 214 IYPQERARIQKSGGTVSSN---GRLQGRLEVSRAFGDRQFKKFGVVATPD 260
+ P+E++ + G V+ + G+ GRL V + R F+ FG ++TPD
Sbjct: 3 LTPEEKSAVTALWGKVNVDEVGGKALGRLLVVYPWTQRFFESFGDLSTPD 52
>pdb|1A00|B Chain B, Hemoglobin (Val Beta1 Met, Trp Beta37 Tyr) Mutant
pdb|1A00|D Chain D, Hemoglobin (Val Beta1 Met, Trp Beta37 Tyr) Mutant
pdb|1YEQ|B Chain B, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betaw37y Oxy (10 Test Sets)
pdb|1YEQ|D Chain D, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betaw37y Oxy (10 Test Sets)
pdb|1Y46|B Chain B, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betaw37y Deoxy Low-Salt (10 Test Sets)
pdb|1Y46|D Chain D, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betaw37y Deoxy Low-Salt (10 Test Sets)
Length = 146
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 214 IYPQERARIQKSGGTVSSN---GRLQGRLEVSRAFGDRQFKKFGVVATPD 260
+ P+E++ + G V+ + G GRL V + R F+ FG ++TPD
Sbjct: 3 LTPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPYTQRFFESFGDLSTPD 52
>pdb|1Y2Z|B Chain B, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betav34g Deoxy Low-Salt (1 Test Set)
pdb|1Y2Z|D Chain D, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betav34g Deoxy Low-Salt (1 Test Set)
Length = 146
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 214 IYPQERARIQKSGGTVSSN---GRLQGRLEVSRAFGDRQFKKFGVVATPD 260
+ P+E++ + G V+ + G GRL V + R F+ FG ++TPD
Sbjct: 3 LTPEEKSAVTALWGKVNVDEVGGEALGRLLVGYPWTQRFFESFGDLSTPD 52
>pdb|1QI8|B Chain B, Deoxygenated Structure Of A Distal Pocket Hemoglobin
Mutant
pdb|1QI8|D Chain D, Deoxygenated Structure Of A Distal Pocket Hemoglobin
Mutant
pdb|1J7W|B Chain B, Crystal Structure Of Deoxy Hbbetayq, A Site Directed
Mutant Of Hba
pdb|1J7W|D Chain D, Crystal Structure Of Deoxy Hbbetayq, A Site Directed
Mutant Of Hba
pdb|1J7Y|B Chain B, Crystal Structure Of Partially Ligated Mutant Of Hba
pdb|1J7Y|D Chain D, Crystal Structure Of Partially Ligated Mutant Of Hba
pdb|2W72|B Chain B, Deoxygenated Structure Of A Distal Site Hemoglobin Mutant
Plus Xe
pdb|2W72|D Chain D, Deoxygenated Structure Of A Distal Site Hemoglobin Mutant
Plus Xe
Length = 146
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 214 IYPQERARIQKSGGTVSSN---GRLQGRLEVSRAFGDRQFKKFGVVATPD 260
+ P+E++ + G V+ + G GRL V + R F+ FG ++TPD
Sbjct: 3 LTPEEKSAVTALWGKVNVDEVGGEAYGRLLVVYPWTQRFFESFGDLSTPD 52
>pdb|1YE1|B Chain B, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betay35a Oxy (2mm Ihp, 20% Peg) (1 Test Set)
pdb|1YE1|D Chain D, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betay35a Oxy (2mm Ihp, 20% Peg) (1 Test Set)
pdb|1Y31|B Chain B, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betay35a Deoxy Low-Salt (1 Test Set)
pdb|1Y31|D Chain D, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betay35a Deoxy Low-Salt (1 Test Set)
Length = 146
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 214 IYPQERARIQKSGGTVSSN---GRLQGRLEVSRAFGDRQFKKFGVVATPD 260
+ P+E++ + G V+ + G GRL V + R F+ FG ++TPD
Sbjct: 3 LTPEEKSAVTALWGKVNVDEVGGEALGRLLVVAPWTQRFFESFGDLSTPD 52
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,600,124
Number of Sequences: 62578
Number of extensions: 313067
Number of successful extensions: 818
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 747
Number of HSP's gapped (non-prelim): 38
length of query: 334
length of database: 14,973,337
effective HSP length: 99
effective length of query: 235
effective length of database: 8,778,115
effective search space: 2062857025
effective search space used: 2062857025
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)