Query 019889
Match_columns 334
No_of_seqs 283 out of 1445
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 08:37:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019889.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019889hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2p8e_A PPM1B beta isoform vari 100.0 7.9E-54 2.7E-58 394.3 27.7 261 53-333 21-299 (307)
2 2i0o_A Ser/Thr phosphatase; be 100.0 5.4E-54 1.9E-58 394.9 24.2 256 52-332 19-304 (304)
3 3qn1_B Protein phosphatase 2C 100.0 2.5E-53 8.6E-58 395.6 22.7 260 57-333 15-329 (337)
4 1a6q_A Phosphatase 2C; catalyt 100.0 3E-52 1E-56 393.5 27.9 261 53-333 19-293 (382)
5 2iq1_A Protein phosphatase 2C 100.0 3.4E-52 1.2E-56 377.5 26.5 247 55-333 7-263 (274)
6 3kdj_B Protein phosphatase 2C 100.0 1.1E-51 3.9E-56 381.4 27.6 259 55-333 8-306 (316)
7 2i44_A Serine-threonine phosph 100.0 4E-51 1.4E-55 379.1 30.0 265 54-333 20-322 (324)
8 2pnq_A [pyruvate dehydrogenase 100.0 9.7E-53 3.3E-57 405.5 19.1 291 23-333 7-456 (467)
9 4da1_A Protein phosphatase 1K, 100.0 1.6E-50 5.3E-55 383.4 25.6 246 56-333 122-377 (389)
10 2isn_A NYSGXRC-8828Z, phosphat 100.0 8.2E-50 2.8E-54 374.8 28.6 251 53-333 10-334 (364)
11 2irm_A Mitogen-activated prote 100.0 1.1E-50 3.6E-55 380.8 19.9 253 61-333 25-357 (358)
12 2j4o_A Mitogen-activated prote 100.0 9.4E-51 3.2E-55 386.1 19.7 261 54-333 25-367 (401)
13 3d8k_A PP2C, protein phosphata 100.0 2.2E-50 7.6E-55 379.9 19.4 249 52-333 9-325 (377)
14 2pk0_A Serine/threonine protei 100.0 5.7E-45 2E-49 325.5 24.9 241 54-333 4-247 (250)
15 1txo_A Putative bacterial enzy 100.0 8.2E-44 2.8E-48 315.6 22.6 231 54-333 3-237 (237)
16 2j82_A TPPHA, protein serine-t 100.0 1.1E-43 3.7E-48 315.2 20.8 233 56-331 1-240 (240)
17 2jfr_A Ser-Thr phosphatase MSP 100.0 4.2E-42 1.5E-46 303.9 21.0 225 54-331 4-233 (234)
18 3rnr_A Stage II sporulation E 100.0 4.2E-39 1.5E-43 280.5 12.4 195 89-331 9-211 (211)
19 3t91_A Stage II sporulation pr 99.9 1.7E-22 5.7E-27 179.1 15.6 208 52-333 4-221 (242)
20 3pu9_A Protein serine/threonin 99.9 9.9E-21 3.4E-25 167.7 21.8 206 53-333 8-225 (242)
21 3zt9_A Serine phosphatase; hyd 99.8 2.9E-17 1E-21 140.4 19.5 188 55-330 3-193 (193)
22 3f79_A Probable two-component 99.8 1.6E-17 5.4E-22 148.1 15.4 203 56-332 38-253 (255)
23 3ke6_A Protein RV1364C/MT1410; 99.2 8.5E-10 2.9E-14 104.4 21.5 191 68-333 50-258 (399)
24 3eq2_A Probable two-component 98.5 1.8E-06 6.3E-11 81.0 15.8 175 89-332 202-392 (394)
25 3c4z_A Rhodopsin kinase; Ser/T 52.9 0.44 1.5E-05 46.3 -5.8 78 240-327 43-126 (543)
26 2krx_A ASL3597 protein; struct 43.9 57 0.002 23.3 5.6 48 268-315 8-67 (94)
27 3q4f_C DNA repair protein XRCC 25.4 1.6E+02 0.0053 23.8 5.9 69 255-326 39-115 (186)
28 3mud_A DNA repair protein XRCC 23.2 2.1E+02 0.0071 23.0 6.3 70 255-327 13-90 (175)
29 1dhn_A DHNA, 7,8-dihydroneopte 21.8 2.2E+02 0.0077 20.9 6.1 41 276-316 44-86 (121)
No 1
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=100.00 E-value=7.9e-54 Score=394.28 Aligned_cols=261 Identities=31% Similarity=0.486 Sum_probs=223.4
Q ss_pred ccceeeeeecccCCCCCCCceEEEeccCCCCCCCCCceeEEEEEeCCCchHHHHHHHHHHHHHHHhcC-CChh-------
Q 019889 53 FVEIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAG-LPRE------- 124 (334)
Q Consensus 53 ~~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~l~~~l~~~~-~~~~------- 124 (334)
...+.++.++++|+|+.|||++++..+.+. ...++.||+|||||||+.+|++|++.+++.|.+.. +...
T Consensus 21 ~~~~~~~~~s~~G~R~~nED~~~~~~~~~~---~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~~~~ 97 (307)
T 2p8e_A 21 GNGLRYGLSSMQGWRVEMEDAHTAVVGIPH---GLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSAL 97 (307)
T ss_dssp ETTEEEEEEEEEETSSSCCEEEEEEEEETT---TEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSTTTC---------
T ss_pred CCCeeEEEEecCCCCCcccceEEEEecCCC---CCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHhhHhhhhcccccccc
Confidence 468899999999999999999988643211 12356899999999999999999999999987631 1111
Q ss_pred hhcHHHHHHHHHHHHHhhhHHHHHhhhc--CCCCCCCcEEEEEEeCCeEEEeeeCCceEEEEeeccCCCCCCCcccccce
Q 019889 125 LLDVKAAKKAILDGFRKTDESLLQESVS--GGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSL 202 (334)
Q Consensus 125 ~~~~~~~~~~l~~a~~~~~~~l~~~~~~--~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~~~ 202 (334)
......+.++|.++|.++|+.+.+.... ....+|||++++++.++++|+|||||||+|++|++
T Consensus 98 ~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g--------------- 162 (307)
T 2p8e_A 98 ELSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNG--------------- 162 (307)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEECSSEEEEEEESSCEEEEEETT---------------
T ss_pred cccHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEEEEECCcEEEEEccCcEEEEEECC---------------
Confidence 1134567899999999999999876432 23468999999999999999999999999999998
Q ss_pred eEEEeCCCCCCCChhHHHHHHhcCCEEeeCCeecCcccCcccccCccccCC--------CceecceeEEEEecCCCeEEE
Q 019889 203 KAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKF--------GVVATPDIHSFEVTERDHFII 274 (334)
Q Consensus 203 ~~~~LT~DH~~~~~~E~~ri~~~g~~v~~~~r~~g~~~~tRalGd~~~k~~--------~v~~~P~i~~~~l~~~d~~ll 274 (334)
++.+||+||++.++.|+.||...||.+. .+|++|.+.+|||||+..||.. .++++|++..+++.++|+|||
T Consensus 163 ~~~~lT~DH~~~~~~E~~rI~~~gg~v~-~~rv~g~l~ltRalGd~~~k~~~~~~~~~~~v~~~pdv~~~~l~~~d~~ll 241 (307)
T 2p8e_A 163 QVCFSTQDHKPCNPREKERIQNAGGSVM-IQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFII 241 (307)
T ss_dssp EEEEECCCCCTTSHHHHHHHHHTTCCEE-TTEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTEEEEE
T ss_pred ccccCCCCCCCCCHHHHHHHHHcCCEEE-eCcccCeEeccccccCHHHhcCcccCCCCCeEeccCeEEEEEcCCCCeEEE
Confidence 9999999999999999999999999886 5699999999999999998853 368999999999999888999
Q ss_pred EecCCCccccChHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCCccEEEEEEecC
Q 019889 275 LGCDGLWGVFGPSDAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRH 333 (334)
Q Consensus 275 L~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~a~~l~~~A~~~~g~~DNiTvivv~~~~ 333 (334)
||||||||+++++|+++++...+....+++.+|++|++.|+ .+|+.||||||||++.+
T Consensus 242 L~SDGl~d~ls~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~-~~g~~DNiTvivv~~~~ 299 (307)
T 2p8e_A 242 LACDGIWDVMSNEELCEYVKSRLEVSDDLENVCNWVVDTCL-HKGSRDNMSIVLVCFSN 299 (307)
T ss_dssp EECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHH-HTTCCSCEEEEEEEC--
T ss_pred EECCCcccCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH-HcCCCCCeEEEEEECCC
Confidence 99999999999999999999877656789999999999997 79999999999999864
No 2
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}
Probab=100.00 E-value=5.4e-54 Score=394.90 Aligned_cols=256 Identities=33% Similarity=0.562 Sum_probs=216.9
Q ss_pred cccceeeeeecccCCCCCCCceEEEeccCCCCCCCCCceeEEEEEeCCCchHHHHHHHHHHHHHHHhcCCChhhhcHHHH
Q 019889 52 DFVEIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPRELLDVKAA 131 (334)
Q Consensus 52 ~~~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~l~~~l~~~~~~~~~~~~~~~ 131 (334)
.+..+.++.++++|+|..|||++++..+. ..+..||+|||||||+.+|++|++.+++.|.+.. ......+
T Consensus 19 ~~~~~~~~~~s~~G~R~~nED~~~~~~~~------~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~----~~~~~~~ 88 (304)
T 2i0o_A 19 SNEFLASGSSSMQGWRISQEDAHNCILNF------DDQCSFFAVYDGHGGAEVAQYCSLHLPTFLKTVE----AYGRKEF 88 (304)
T ss_dssp ECSSEEEEEEEEEESSSCCCEEEEEEEEE------ETTEEEEEEEECSSCSHHHHHHHHHHHHHHHHSH----HHHTTCH
T ss_pred CCCceEEEEeecCCCCCCccCEEEEEecc------CCCeEEEEEEcCCCCHHHHHHHHHHHHHHHHhhh----hcccccH
Confidence 34678999999999999999999875432 1256899999999999999999999999887631 1112346
Q ss_pred HHHHHHHHHhhhHHHHHhh----------------hcCCCCCCCcEEEEEEeCCeEEEeeeCCceEEEEeeccCCCCCCC
Q 019889 132 KKAILDGFRKTDESLLQES----------------VSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNH 195 (334)
Q Consensus 132 ~~~l~~a~~~~~~~l~~~~----------------~~~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~ 195 (334)
.++|+++|.++|+.+.... ......+|||++++++.++++|+|||||||+|++|++
T Consensus 89 ~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g-------- 160 (304)
T 2i0o_A 89 EKALKEAFLGFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNG-------- 160 (304)
T ss_dssp HHHHHHHHHHHHHHTTSHHHHHHHHHHHCC-----CCTTTSCEEEEEEEEEETTEEEEEEESSCEEEEEETT--------
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHhhhccccccccccCCCCCCccEEEEEEECCEEEEEEccCcEEEEEECC--------
Confidence 7899999999999876432 1124469999999999999999999999999999998
Q ss_pred cccccceeEEEeCCCCCCCChhHHHHHHhcCCEEeeCCeecCcccCcccccCccccC--------CCceecceeEEEEec
Q 019889 196 LDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKK--------FGVVATPDIHSFEVT 267 (334)
Q Consensus 196 ~~~~~~~~~~~LT~DH~~~~~~E~~ri~~~g~~v~~~~r~~g~~~~tRalGd~~~k~--------~~v~~~P~i~~~~l~ 267 (334)
++++||+||++.++.|+.||...||.+..++|++|.+.+||+||+..+|. ++|+++|++..+++.
T Consensus 161 -------~~~~LT~DH~~~~~~e~~rI~~~gg~v~~~~rv~g~l~ltRalGd~~~k~~~~l~~~~~~v~~~pdi~~~~l~ 233 (304)
T 2i0o_A 161 -------KALEMSFDHKPEDTVEYQRIEKAGGRVTLDGRVNGGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKITVG 233 (304)
T ss_dssp -------EEEECCCCCCTTSHHHHHHHHHTTCCBCTTSCBTTSCSCSBCEECGGGCCCTTSCGGGSSSBCCCEEEEEECC
T ss_pred -------EEEEcCCCcCCcCHHHHHHHHhCCCEEEeCCeEcCceeccccccCHHHccCccCCccCCeEEeeCeEEEEEcC
Confidence 99999999999999999999999999987889999999999999999875 356899999999999
Q ss_pred CCCeEEEEecCCCccccChHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHh-----CCCCCccEEEEEEec
Q 019889 268 ERDHFIILGCDGLWGVFGPSDAVEFVQKLLKE-GLSVTAVSRRLVREAVLE-----RRCKDNCTAIVIIFR 332 (334)
Q Consensus 268 ~~d~~llL~SDGl~d~l~~~ei~~~~~~~~~~-~~~~~~~a~~l~~~A~~~-----~g~~DNiTvivv~~~ 332 (334)
++|.|||||||||||+++++++++++...+.. ..+++.+|++|++.|+.. .++.||||||||+|+
T Consensus 234 ~~D~fllL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~~a~~L~~~a~~~~~~g~~g~~DNiTvivv~~~ 304 (304)
T 2i0o_A 234 PEDEFMVLACDGIWNFMTSEQVVQFVQERINKPGMKLSKICEELFDHCLAPHTRGDGTGCDNMTAIIVQFK 304 (304)
T ss_dssp TTEEEEEEECHHHHTTCCHHHHHHHHHHHHTSTTCCHHHHHHHHHHHHC------------CEEEEEEEEC
T ss_pred CCCeEEEEECcCccccCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEEEeC
Confidence 99988999999999999999999999987765 568999999999999632 468999999999984
No 3
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*
Probab=100.00 E-value=2.5e-53 Score=395.56 Aligned_cols=260 Identities=28% Similarity=0.392 Sum_probs=218.2
Q ss_pred eeeeecccCCCCCCCceEEEeccCCC--------------CCCCCCceeEEEEEeCCCchHHHHHHHHHHHHHHHhcCCC
Q 019889 57 EADAAEDKGSRHTMEDASVVLVDASS--------------DSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLP 122 (334)
Q Consensus 57 ~~~~~s~~G~R~~nED~~~~~~~~~~--------------~~~~~~~~~l~~V~DGhGG~~~~~~as~~l~~~l~~~~~~ 122 (334)
.+|.++++|+|+.|||++++..++.. ......++.||||||||||+.+|++|++.++..|.+.+..
T Consensus 15 ~~G~~s~~G~R~~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~~~ 94 (337)
T 3qn1_B 15 LWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIER 94 (337)
T ss_dssp CEEEEEECTTSSSCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEeeeCCchhhhHHHHHhhhhcccchhcccccccccccccCCCeEEEEEEeCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 47999999999999999998654210 0011226789999999999999999999999988764211
Q ss_pred h---------hhhcHHHHHHHHHHHHHhhhHHHHHhhh-------------cCCCCCCCcEEEEEEeCCeEEEeeeCCce
Q 019889 123 R---------ELLDVKAAKKAILDGFRKTDESLLQESV-------------SGGWQDGATAVCIWILGRTVFVANIGDAK 180 (334)
Q Consensus 123 ~---------~~~~~~~~~~~l~~a~~~~~~~l~~~~~-------------~~~~~~GtT~~~~~i~~~~l~vanvGDSR 180 (334)
. .......+.++|+++|.++|..+..... .....+|||++++++.++++|+|||||||
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~~anvGDSR 174 (337)
T 3qn1_B 95 IKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSR 174 (337)
T ss_dssp TC------------CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCEECEEEEEECSSEEEEEEESSCE
T ss_pred hhhhhhccccccchHHHHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCCCceEEEEEEECCEEEEEeccCcE
Confidence 0 0111256889999999999999986541 12346899999999999999999999999
Q ss_pred EEEEeeccCCCCCCCcccccceeEEEeCCCCCCCChhHHHHHHhcCCEEee--CCeecCcccCcccccCccccCCCceec
Q 019889 181 AVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSS--NGRLQGRLEVSRAFGDRQFKKFGVVAT 258 (334)
Q Consensus 181 ~~l~r~~~~~~~~~~~~~~~~~~~~~LT~DH~~~~~~E~~ri~~~g~~v~~--~~r~~g~~~~tRalGd~~~k~~~v~~~ 258 (334)
+|++|.+ ++++||+||++.++.|+.||...||.+.. .+|++|.+++||+||+..+|+. ++++
T Consensus 175 ~~l~r~g---------------~~~~lT~DH~~~~~~e~~ri~~~gg~v~~~~~~r~~g~l~~sRalGd~~~~~~-v~~~ 238 (337)
T 3qn1_B 175 AVLFRGK---------------EAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPY-VIPE 238 (337)
T ss_dssp EEEEETT---------------EEEESCCCCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCSBCEECGGGTTT-SBCC
T ss_pred EEEEeCC---------------EeeeecCCCCCCCHHHHHHHHHcCCeEEecCCceecCccccccccccccccCC-CCCc
Confidence 9999998 99999999999999999999999999976 3599999999999999998876 8899
Q ss_pred ceeEEEEecCCCeEEEEecCCCccccChHHHHHHHHHHHHc-----------------CCCHHHHHHHHHHHHHHhCCCC
Q 019889 259 PDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKE-----------------GLSVTAVSRRLVREAVLERRCK 321 (334)
Q Consensus 259 P~i~~~~l~~~d~~llL~SDGl~d~l~~~ei~~~~~~~~~~-----------------~~~~~~~a~~l~~~A~~~~g~~ 321 (334)
|++..+++.+.++|||||||||||+++++||++++...+.. ..+++.+|+.|++.|+ .+|+.
T Consensus 239 pdv~~~~~~~~~d~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Lv~~A~-~~g~~ 317 (337)
T 3qn1_B 239 PEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLAL-QKGSK 317 (337)
T ss_dssp CEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHHHHHHHHCCC----CCSSCCHHHHHHHHHHHHHHH-HTTCC
T ss_pred ceEEEEEeCCCCCEEEEEecCcccCCCHHHHHHHHHHHhhhhccccccccccccccccChhHHHHHHHHHHHHH-HcCCC
Confidence 99999999776779999999999999999999999874321 2357899999999997 79999
Q ss_pred CccEEEEEEecC
Q 019889 322 DNCTAIVIIFRH 333 (334)
Q Consensus 322 DNiTvivv~~~~ 333 (334)
||||||||+|..
T Consensus 318 DNiTvivv~l~~ 329 (337)
T 3qn1_B 318 DNISIIVIDLKA 329 (337)
T ss_dssp SCEEEEEEECCS
T ss_pred CCEEEEEEEecC
Confidence 999999999975
No 4
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=100.00 E-value=3e-52 Score=393.50 Aligned_cols=261 Identities=31% Similarity=0.496 Sum_probs=225.1
Q ss_pred ccceeeeeecccCCCCCCCceEEEeccCCCCCCCCCceeEEEEEeCCCchHHHHHHHHHHHHHHHhc--CC-ChhhhcHH
Q 019889 53 FVEIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISA--GL-PRELLDVK 129 (334)
Q Consensus 53 ~~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~l~~~l~~~--~~-~~~~~~~~ 129 (334)
...+.++.++++|+|..|||++++...... ...++.||+|||||||+.+|++|++.++..|... +. ........
T Consensus 19 ~~~l~~g~~s~~G~R~~nEDa~~~~~~~~~---~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~~~~~~~~~~~~ 95 (382)
T 1a6q_A 19 GNGLRYGLSSMQGWRVEMEDAHTAVIGLPS---GLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVE 95 (382)
T ss_dssp ETTEEEEEEEEEETSSSCCEEEEEEEEETT---TEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSSSCCHH
T ss_pred CCceEEEEEecCCCCCCCCceeEEecCCCC---CCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHhhhhhhccCCCCCHH
Confidence 468899999999999999999998654211 1235689999999999999999999999988642 10 00112346
Q ss_pred HHHHHHHHHHHhhhHHHHHhhh--cCCCCCCCcEEEEEEeCCeEEEeeeCCceEEEEeeccCCCCCCCcccccceeEEEe
Q 019889 130 AAKKAILDGFRKTDESLLQESV--SGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVV 207 (334)
Q Consensus 130 ~~~~~l~~a~~~~~~~l~~~~~--~~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~~~~~~~L 207 (334)
.+..+|.++|..+|+.|..... .....+|||++++++.++++|+|||||||+|++|.+ ++.+|
T Consensus 96 ~~~~~l~~af~~~n~~i~~~~~~~~~~~~~GtT~~~~li~~~~l~vanvGDSRayl~r~g---------------~~~~L 160 (382)
T 1a6q_A 96 NVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNR---------------KVHFF 160 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETT---------------EEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccCCCCCcceEEEEEEECCeEEEEEcCCCeEEEEECC---------------ceEEe
Confidence 7789999999999999987652 233469999999999999999999999999999998 99999
Q ss_pred CCCCCCCChhHHHHHHhcCCEEeeCCeecCcccCcccccCccccCC--------CceecceeEEEEec-CCCeEEEEecC
Q 019889 208 TRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKF--------GVVATPDIHSFEVT-ERDHFIILGCD 278 (334)
Q Consensus 208 T~DH~~~~~~E~~ri~~~g~~v~~~~r~~g~~~~tRalGd~~~k~~--------~v~~~P~i~~~~l~-~~d~~llL~SD 278 (334)
|.||++.++.|+.||..+||.+. .+|++|.+++|||||+..||.. .|+++|++..+++. ++|+|||||||
T Consensus 161 T~DHs~~~~~E~~RI~~~gg~v~-~~Rv~g~l~ltRalGd~~~K~~~~~~~~~~~v~~~Pdv~~~~l~~~~dd~llLaSD 239 (382)
T 1a6q_A 161 TQDHKPSNPLEKERIQNAGGSVM-IQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACD 239 (382)
T ss_dssp CCCCCTTSHHHHHHHHHTTCCEE-TTEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECH
T ss_pred CCCCCCCCHHHHHHHHhcCcEEe-cccccCceeeeeecCcHhhcccccCCCccCeeeeeeeEEEEEccCCCCeEEEEecc
Confidence 99999999999999999999987 4699999999999999998853 36899999999998 77779999999
Q ss_pred CCccccChHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCCccEEEEEEecC
Q 019889 279 GLWGVFGPSDAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRH 333 (334)
Q Consensus 279 Gl~d~l~~~ei~~~~~~~~~~~~~~~~~a~~l~~~A~~~~g~~DNiTvivv~~~~ 333 (334)
||||+++++++++++...+....+++.+|++|++.|+ .+|+.||||||||+|..
T Consensus 240 Glwd~ls~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~-~~g~~DNiTvivv~~~~ 293 (382)
T 1a6q_A 240 GIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCL-YKGSRDNMSVILICFPN 293 (382)
T ss_dssp HHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHH-HTTCCSCEEEEEEECTT
T ss_pred CccCCCChHHHHHHHHHHHhcCCCHHHHHHHHHHHHH-hcCCcCCEEEEEEEecC
Confidence 9999999999999999877666789999999999997 69999999999999864
No 5
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.4e-52 Score=377.47 Aligned_cols=247 Identities=25% Similarity=0.398 Sum_probs=215.7
Q ss_pred ceeeeeecccCCCCCCCceEEEeccCCCCCCCCCceeEEEEEeCCCchHHHHHHHHHHHHHHHhcCCChhhhcHHHHHHH
Q 019889 55 EIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPRELLDVKAAKKA 134 (334)
Q Consensus 55 ~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~l~~~l~~~~~~~~~~~~~~~~~~ 134 (334)
...++.++++|+|+.|||++++... ..+..+|+|||||||+.+|++|++.+++.+.+.+.. ...+.++
T Consensus 7 ~~~~g~~s~~G~R~~nED~~~~~~~-------~~~~~l~~V~DG~GG~~~a~~as~~~~~~l~~~~~~-----~~~~~~~ 74 (274)
T 2iq1_A 7 LENVGCASQIGKRKENEDRFDFAQL-------TDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPK-----EKNLETL 74 (274)
T ss_dssp GGGCEEEEECCSSSSCCEEEEEEEC-------SSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHTTT-----CCCHHHH
T ss_pred CCeEEEEecccCCCCccceEEEeeC-------CCCeEEEEEECCCCCHHHHHHHHHHHHHHHHHHhcc-----cccHHHH
Confidence 3457889999999999999988531 235689999999999999999999999888654321 1245688
Q ss_pred HHHHHHhhhHHHHHhhhc----CCCCCCCcEEEEEEeC-CeEEEeeeCCceEEEEeeccCCCCCCCcccccceeEEEeCC
Q 019889 135 ILDGFRKTDESLLQESVS----GGWQDGATAVCIWILG-RTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTR 209 (334)
Q Consensus 135 l~~a~~~~~~~l~~~~~~----~~~~~GtT~~~~~i~~-~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~~~~~~~LT~ 209 (334)
|.++|..+|+.+.+.... ....+|||++++++.+ .++|+|||||||+|++|++ ++.+||.
T Consensus 75 l~~a~~~~~~~i~~~~~~~~~~~~~~~GtT~~~~~i~~~~~l~~anvGDSR~~l~r~g---------------~~~~lT~ 139 (274)
T 2iq1_A 75 LTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKG---------------KPMKLTI 139 (274)
T ss_dssp HHHHHHHHHHHHHHHHHC---CCGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETT---------------EEEECCC
T ss_pred HHHHHHHHHHHHHHHhhhccccCCCCCCCcEEEEEEECCCEEEEEEecCceEEEEeCC---------------EeeECCC
Confidence 999999999999876532 2346899999999985 5899999999999999998 9999999
Q ss_pred CCCCCChhHHHHHHhcCCEEeeCC----eecCcccCcccccCccccCCCceecceeEEEEecCC-CeEEEEecCCCcccc
Q 019889 210 VHKAIYPQERARIQKSGGTVSSNG----RLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTER-DHFIILGCDGLWGVF 284 (334)
Q Consensus 210 DH~~~~~~E~~ri~~~g~~v~~~~----r~~g~~~~tRalGd~~~k~~~v~~~P~i~~~~l~~~-d~~llL~SDGl~d~l 284 (334)
||++..+.|+.||.+.||.+..+. ++++.+.+||+||+..+|+++++++|++..+++.++ |+|||||||||||++
T Consensus 140 DH~~~~~~E~~Ri~~~gG~v~~~~~~~~~~~~~~~ltralGd~~~k~~~v~~~pdi~~~~l~~g~d~~lll~SDGl~d~l 219 (274)
T 2iq1_A 140 DHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMV 219 (274)
T ss_dssp CCCTTSHHHHHHHHHTTCCEEECTTSCEEETTTBSCSBCEECGGGTTTTCBCCCEEEEEECCTTTEEEEEEECHHHHTTC
T ss_pred CCCCcCHHHHHHHHHcCCEEEcCCCCceeECCeEeeccccCChhhccCCEEeCCEEEEEEeCCCCCcEEEEEccCcccCC
Confidence 999999999999999999998752 678999999999999999999999999999999985 569999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCCccEEEEEEecC
Q 019889 285 GPSDAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRH 333 (334)
Q Consensus 285 ~~~ei~~~~~~~~~~~~~~~~~a~~l~~~A~~~~g~~DNiTvivv~~~~ 333 (334)
+++++.+++.. ..+++++|+.|++.|+ .+|+.||+|||||++..
T Consensus 220 ~~~ei~~~~~~----~~~~~~~a~~L~~~A~-~~g~~DNiTvivv~~~~ 263 (274)
T 2iq1_A 220 NSQEICDFVNQ----CHDPNEAAHAVTEQAI-QYGTEDNSTAVVVPFGA 263 (274)
T ss_dssp CHHHHHHHHHT----SSSHHHHHHHHHHHHH-HTTCCSCEEEEEEECTT
T ss_pred CHHHHHHHHHH----cCCHHHHHHHHHHHHH-HcCCCCCeEEEEEEccC
Confidence 99999999876 5689999999999997 69999999999999865
No 6
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*
Probab=100.00 E-value=1.1e-51 Score=381.40 Aligned_cols=259 Identities=27% Similarity=0.430 Sum_probs=216.3
Q ss_pred ceeeeeecccCCCCCCCceEEEeccCCCC---------CCCCCceeEEEEEeCCCchHHHHHHHHHHHHHHHhcCCCh--
Q 019889 55 EIEADAAEDKGSRHTMEDASVVLVDASSD---------SPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPR-- 123 (334)
Q Consensus 55 ~~~~~~~s~~G~R~~nED~~~~~~~~~~~---------~~~~~~~~l~~V~DGhGG~~~~~~as~~l~~~l~~~~~~~-- 123 (334)
...+|.++++|+|+.|||++++..+.... +....+..+|+|||||||+.+|++|++.++..|.+.+...
T Consensus 8 ~~~~g~~s~~G~R~~nEDa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~~~~~~~ 87 (316)
T 3kdj_B 8 VPLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYCRERMHLALAEEIAKEKP 87 (316)
T ss_dssp --CEEEEEECTTSSSCCEEEEEETTCC-----------CCGGGGCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCeEEEEEeEeCCCCCccceeeecccccccccccccccccCCCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 35689999999999999999987553210 1122467899999999999999999999999887642110
Q ss_pred ----hhhcHHHHHHHHHHHHHhhhHHHHHhhhcCCCCCCCcEEEEEEeCCeEEEeeeCCceEEEEeeccCCCCCCCcccc
Q 019889 124 ----ELLDVKAAKKAILDGFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDEL 199 (334)
Q Consensus 124 ----~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~ 199 (334)
.....+.+.++|.++|.++|..+... ....+|||++++++.++++|+|||||||+|++|++
T Consensus 88 ~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~---~~~~~GtT~~~~~i~~~~l~vanvGDSR~yl~r~g------------ 152 (316)
T 3kdj_B 88 MLSDGDTWLEKWKKALFNSFLRVDSEIESV---APETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGK------------ 152 (316)
T ss_dssp CGGGTHHHHHHHHHHHHHHHHHHHHHGGGT---SCTTCEECEEEEEECSSEEEEEEESSCEEEEEETT------------
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHhcc---cCCCCCCcEEEEEEECCEEEEEEccCCEEEEEECC------------
Confidence 01123467889999999999988543 23468999999999999999999999999999998
Q ss_pred cceeEEEeCCCCCCCChhHHHHHHhcCCEEee--CCeecCcccCcccccCccccCCCceecceeEEEEecCCCeEEEEec
Q 019889 200 SSLKAIVVTRVHKAIYPQERARIQKSGGTVSS--NGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGC 277 (334)
Q Consensus 200 ~~~~~~~LT~DH~~~~~~E~~ri~~~g~~v~~--~~r~~g~~~~tRalGd~~~k~~~v~~~P~i~~~~l~~~d~~llL~S 277 (334)
++++||+||++.++.|+.||...||.+.. .+|++|.+++||+||+..+|+. ++++|++..+.+.+.++||||||
T Consensus 153 ---~~~~lT~DH~~~~~~e~~ri~~~~g~v~~~~~~r~~g~l~~sRalGd~~~~~~-~~~~pdv~~~~~~~~~d~llL~S 228 (316)
T 3kdj_B 153 ---TALPLSVDHKPDREDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKPS-IIPDPEVTAVKRVKEDDCLILAS 228 (316)
T ss_dssp ---EEEESCCCCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCSBCEECGGGTTT-SBCCCEEEEEECCTTEEEEEEEC
T ss_pred ---EecccCCCCCCCCHHHHHHHHHcCCeEEecCCceEcceeccccccCccccCCC-cCCCCceEEEEecCCCCEEEEEc
Confidence 99999999999999999999999999976 3599999999999999998875 89999999999555556999999
Q ss_pred CCCccccChHHHHHHHHHHHH-----------------------cCCCHHHHHHHHHHHHHHhCCCCCccEEEEEEecC
Q 019889 278 DGLWGVFGPSDAVEFVQKLLK-----------------------EGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRH 333 (334)
Q Consensus 278 DGl~d~l~~~ei~~~~~~~~~-----------------------~~~~~~~~a~~l~~~A~~~~g~~DNiTvivv~~~~ 333 (334)
|||||+++++|+++++...+. ...+++.+|+.|++.|+ .+|+.||||||||++.+
T Consensus 229 DGl~d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~Lv~~A~-~~g~~DNiTvivv~l~~ 306 (316)
T 3kdj_B 229 DGVWDVMTDEEACEMARKRILLWHKKNAVAGGASLLADERRKEGKDPAAMSAAEYLSKLAI-QRGSKDNISVVVVDLKP 306 (316)
T ss_dssp HHHHTSSCHHHHHHHHHHHHHHHTTC-----------------CCCHHHHHHHHHHHHHHH-HTTCCSCEEEEEEECSC
T ss_pred cCcccCCCHHHHHHHHHHHhhhhccccccccccccccccccccccCchHHHHHHHHHHHHH-HcCCCCCeEEEEEEccC
Confidence 999999999999999987321 12347889999999997 79999999999999875
No 7
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}
Probab=100.00 E-value=4e-51 Score=379.14 Aligned_cols=265 Identities=26% Similarity=0.395 Sum_probs=217.3
Q ss_pred cceeeeeecccCCCCCCCceEEEeccCCCCCCCCCceeEEEEEeCCCchHHHHHHHHHHHHHHHhcC-CCh-------h-
Q 019889 54 VEIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAG-LPR-------E- 124 (334)
Q Consensus 54 ~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~l~~~l~~~~-~~~-------~- 124 (334)
+.+.+++++++|+|+.|||++++..+. ++...+..||+|||||||+.+|++|++.++..|.+.. +.. .
T Consensus 20 ~~~~~~~~s~~G~R~~nED~~~~~~~~---~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~~~~~~~~~l~~~~ 96 (324)
T 2i44_A 20 PAFDAAIFTDIGGRKHQEDRFTLCPQL---VPGRDDCAFFGVFDGTVGDFASENVKDLVVPQLISSPAWQEVTEMLRSDV 96 (324)
T ss_dssp TTEEEEEEEECTTSSSCCEEEEEESCC---STTCSSEEEEEEEEEESSSHHHHHHHHHHHHHHHTCHHHHHHHHHHTSCC
T ss_pred cceEEEEEECCCCCCccCCeEEEEecC---CCCCCCeEEEEEeCCCCchHHHHHHHHHHHHHHHhhhHHHHHHHHhhccC
Confidence 568899999999999999999986432 2234567899999999999999999999999886531 000 0
Q ss_pred ------hhcHHHHHHHHHHHHHhhhHHHHHhhhcC-CCCCCCcEEEEEEeCCeEEEeeeCCceEEEEeeccCCCCCCCcc
Q 019889 125 ------LLDVKAAKKAILDGFRKTDESLLQESVSG-GWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLD 197 (334)
Q Consensus 125 ------~~~~~~~~~~l~~a~~~~~~~l~~~~~~~-~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~~~ 197 (334)
......+.++|+++|.++|+.|.+..... ....|+|++++++.++++|+|||||||+|++|.+.
T Consensus 97 ~~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~g~gtt~~~i~~~~l~vanvGDSRa~l~r~~~--------- 167 (324)
T 2i44_A 97 PATEVDEKLPQLLDQAVDDMYKNADNELVKMCEQLNKDYASSTSVTAVLAKGFVAVGHLGDSRIAMGVETP--------- 167 (324)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCEECEEEEEEETTEEEEEEESSCEEEEEEEET---------
T ss_pred CccccccccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEECCeEEEEEccCceEEEEeccC---------
Confidence 01134678899999999999998776432 22345555555689999999999999999999730
Q ss_pred cccceeEEEeCCCCCCCChhHHHHHHhcCCEEee-----C--CeecCcccCcccccC----ccc---------cCCCcee
Q 019889 198 ELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSS-----N--GRLQGRLEVSRAFGD----RQF---------KKFGVVA 257 (334)
Q Consensus 198 ~~~~~~~~~LT~DH~~~~~~E~~ri~~~g~~v~~-----~--~r~~g~~~~tRalGd----~~~---------k~~~v~~ 257 (334)
..|++++||.||++.++.|++||.++||.+.. + .+..|.+.+|||||+ ..| +.++|++
T Consensus 168 --~g~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~~~~~~~~~~~~g~l~~sra~Gd~p~~~~~~~~~g~~~~~~~~v~~ 245 (324)
T 2i44_A 168 --NGLNCEFLTVDHKPDMPHEKLRIMRNGGSVEYLHNHNNKPFIRGGDFSFRKSRGEQPMQLQYSRAFGGKDLKMYGLSN 245 (324)
T ss_dssp --TEEEEEESCCCCCTTSHHHHHHHHHTTCEEECCTTCTTSCEEECTTHHHHHHTTCCCCCBSSSBCEECGGGTTTTCBC
T ss_pred --CCceEEECCCCCCCcCHHHHHHHHHcCCEEEecccccCCCccccCcccchhhcCCccccceeccccCCccccCCeEee
Confidence 01379999999999999999999999999942 1 146788999999999 443 4566899
Q ss_pred cceeEEEEecCCCeEEEEecCCCccccChHHHHHHHHHHHHcCCCHHH--HHHHHHHHHHHhCCCCCccEEEEEEecC
Q 019889 258 TPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKEGLSVTA--VSRRLVREAVLERRCKDNCTAIVIIFRH 333 (334)
Q Consensus 258 ~P~i~~~~l~~~d~~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~--~a~~l~~~A~~~~g~~DNiTvivv~~~~ 333 (334)
+|++..+++.++|+|||||||||||+++++|+++++...+..+.+++. +|++|++.|+ .+|+.||||||||+|.+
T Consensus 246 ~pdv~~~~l~~~d~~llLaSDGl~d~ls~~ei~~~v~~~~~~~~~~~~~~~a~~L~~~A~-~~g~~DNiTvivv~~~~ 322 (324)
T 2i44_A 246 QPDVRVVRVTPQHRVMILATDGLWDVMSAAQAVEIAMQARQEGRNPAQALVEMTLAEQQS-RNQSADNITAMTVFFKK 322 (324)
T ss_dssp CCEEEEEECCTTEEEEEEECHHHHTTCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH-TTCCCCCEEEEEEEEC-
T ss_pred cCEEEEEEcCCCCeEEEEEcCchhccCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH-hcCCCCCCEEEEEEeeC
Confidence 999999999999889999999999999999999999987766678999 9999999996 79999999999999975
No 8
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A
Probab=100.00 E-value=9.7e-53 Score=405.52 Aligned_cols=291 Identities=25% Similarity=0.333 Sum_probs=225.8
Q ss_pred cccChhhHHHHHhhhHHHHHHHhhhcccccccceeeeeecccC-CCCCCCceEEEeccCCCCCCCCCceeEEEEEeCCCc
Q 019889 23 NLIAKKSKIEKVNENEEEAARAQIMHKQIDFVEIEADAAEDKG-SRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGG 101 (334)
Q Consensus 23 ~~~~~~~~~~~l~~~e~~~~~~~i~~~~~~~~~~~~~~~s~~G-~R~~nED~~~~~~~~~~~~~~~~~~~l~~V~DGhGG 101 (334)
.+|++++++.+|+.+|.++.-. +...++.....++.+++| .|..|||++.+.... ..++.||||||||||
T Consensus 7 ~~l~~~~~~~~l~~~e~s~~~~---~~~g~~~~~v~~~~s~~g~~R~~nED~~~v~~~~------~~~~~lfgVfDGHGG 77 (467)
T 2pnq_A 7 FYLTPPQVNSILKANEYSFKVP---EFDGKNVSSILGFDSNRLPANAPIEDRRSATTCL------QTRGMLLGVFDGHAG 77 (467)
T ss_dssp --CCHHHHHHHHHHHCEEEECC---CCTTTCCCSEEEEEEEEECCSSSCCEEEEEEEES------SSSCEEEEEEEEESS
T ss_pred ccCCHHHHHHHHhccCeeEEec---CCCCCcccceEEEEeeccCCCCCCCCceeeeecc------CCCcEEEEEECCCCC
Confidence 7899999999999987655431 111222233444556666 899999999876432 124579999999999
Q ss_pred hHHHHHHHHHHHHHHHhcCCChh---------------------------h----------------------h-----c
Q 019889 102 RLAAEYAQKRLHANVISAGLPRE---------------------------L----------------------L-----D 127 (334)
Q Consensus 102 ~~~~~~as~~l~~~l~~~~~~~~---------------------------~----------------------~-----~ 127 (334)
+.+|++|++.++.+|...+++.. . . .
T Consensus 78 ~~aa~~as~~L~~~i~~~l~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 157 (467)
T 2pnq_A 78 CACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRALLPILQWHKHPNDYFSKEASKLYFNGLRTYWQELIDLNTGESA 157 (467)
T ss_dssp SHHHHHHHHHHHHHHHHHHCCHHHHHHHHTTTC----CCCCEEECCCTTCCCCSTTHHHHHHHHHHHHHHHHHC------
T ss_pred HHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhccccccccccccccccccchhhhhhhhhcchhhhhhhhccccccccc
Confidence 99999999999998864311000 0 0 0
Q ss_pred HHHHHHHHHHHHHhhhHHHHHhhhc------------CCCCCCCcEEEEEEeCCeEEEeeeCCceEEEEeeccCCCCCCC
Q 019889 128 VKAAKKAILDGFRKTDESLLQESVS------------GGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNH 195 (334)
Q Consensus 128 ~~~~~~~l~~a~~~~~~~l~~~~~~------------~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~ 195 (334)
...+.++|+++|.++|+.|...... ....+|||++++++.++++|||||||||+|+++.+
T Consensus 158 ~~~~~~aL~~af~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~GtTa~v~li~~~~l~vAnvGDSRa~l~r~~-------- 229 (467)
T 2pnq_A 158 DIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQE-------- 229 (467)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHSEECEEEEEEETTEEEEEEESSCEEEEEEEC--------
T ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhcccccccccccccCCCCcceEEEEEEECCEEEEEECCCceEEEEEec--------
Confidence 0146789999999999999876532 12358999999999999999999999999999963
Q ss_pred cccccceeEEEeCCCCCCCChhHHHHHHhcCCE-----EeeCCeecCcccCcccccCccccC------------------
Q 019889 196 LDELSSLKAIVVTRVHKAIYPQERARIQKSGGT-----VSSNGRLQGRLEVSRAFGDRQFKK------------------ 252 (334)
Q Consensus 196 ~~~~~~~~~~~LT~DH~~~~~~E~~ri~~~g~~-----v~~~~r~~g~~~~tRalGd~~~k~------------------ 252 (334)
..+.|.+++||.||++.++.|++||.++|+. +...+|++|.+++||||||..||+
T Consensus 230 --~~g~~~~~~LT~DH~~~~~~E~~Ri~~~g~~~~~~~~~~~~Rv~G~l~vtRAlGd~~~K~~~~~~~~~~~~~~G~~~~ 307 (467)
T 2pnq_A 230 --EDGSWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLND 307 (467)
T ss_dssp --TTSCEEEEECCCCCSTTCHHHHHHHHHTSCGGGHHHHBSSSSBTTTBSSSBCEECGGGTSCHHHHHHHHSSSCC----
T ss_pred --CCCcEEEEECCCCCCCCCHHHHHHHHHcCCCcccceeEecCccccccccchhcCchhhcccchhhhhhhccccccccc
Confidence 1235789999999999999999999999853 334679999999999999998874
Q ss_pred --------------CCceecceeEEEEecCCCeEEEEecCCCccccChHHHHHHHHHHHHcC--CCH-------------
Q 019889 253 --------------FGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKEG--LSV------------- 303 (334)
Q Consensus 253 --------------~~v~~~P~i~~~~l~~~d~~llL~SDGl~d~l~~~ei~~~~~~~~~~~--~~~------------- 303 (334)
++++++|+|..+++.++|.|||||||||||+|+++|+++++...+... .+|
T Consensus 308 ~~~~~~~~~~~~~~p~v~~~Pdv~~~~l~~~D~fLVLaSDGLwd~ls~~eiv~iv~~~~~~~~~~~p~~~~~~~~~~~~~ 387 (467)
T 2pnq_A 308 NEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYLTGMHHQQPIAVGGYKVTLGQM 387 (467)
T ss_dssp -------CTTCSSSCCCBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCSSCC--------------
T ss_pred ccccccccccccCCCcccccceEEEEEcCCCCeEEEEEecCccccCChHHHHHHHHHHHhhccccCcccccccCccHHHH
Confidence 347999999999999999999999999999999999999999876321 011
Q ss_pred -----------------HHHHHHHHHHHHHhCC-----------------------CCCccEEEEEEecC
Q 019889 304 -----------------TAVSRRLVREAVLERR-----------------------CKDNCTAIVIIFRH 333 (334)
Q Consensus 304 -----------------~~~a~~l~~~A~~~~g-----------------------~~DNiTvivv~~~~ 333 (334)
+.+|..|++.|+ ..+ +.||||||||+|..
T Consensus 388 ~~~l~~r~~~~~~~~~~~naA~~Lir~Al-~~~~~Ge~~~~~~~~ll~~~~~~~R~~~DdITViVv~~~~ 456 (467)
T 2pnq_A 388 HGLLTERRAKMSSVFEDQNAATHLIRHAV-GNNEFGAVDHERLSKMLSLPEELARMYRDDITIIVVQFNS 456 (467)
T ss_dssp -----------------CCHHHHHHHHHH-C-------------------------CCSCEEEEEEEECH
T ss_pred HHHHHHhhhcccCCchhhHHHHHHHHHHh-cCCCcCcchHHHHHhhhcCCccccccCCCCcEEEEEEeCc
Confidence 567899999997 333 48999999999864
No 9
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A
Probab=100.00 E-value=1.6e-50 Score=383.45 Aligned_cols=246 Identities=25% Similarity=0.405 Sum_probs=216.0
Q ss_pred eeeeeecccCCCCCCCceEEEeccCCCCCCCCCceeEEEEEeCCCchHHHHHHHHHHHHHHHhcCCChhhhcHHHHHHHH
Q 019889 56 IEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPRELLDVKAAKKAI 135 (334)
Q Consensus 56 ~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~l~~~l~~~~~~~~~~~~~~~~~~l 135 (334)
+.++.++++|+|+.|||++++... ..+..+|+|||||||+.+|++|++.++..+...+.. ...+..+|
T Consensus 122 ~~~g~~s~~G~R~~NED~~~~~~~-------~~~~~l~~VaDG~GG~~~g~~as~~~~~~l~~~~~~-----~~~~~~~l 189 (389)
T 4da1_A 122 ENVGCASQIGKRKENEDRFDFAQL-------TDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPK-----EKNLETLL 189 (389)
T ss_dssp GGCEEEEECTTSSSCCEEEEEEEC-------SSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHTTT-----CCCHHHHH
T ss_pred eeEEEecCCCCCCCCcceeeeeec-------CCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHhcc-----ccCHHHHH
Confidence 346789999999999999988531 235689999999999999999999999988765322 13456889
Q ss_pred HHHHHhhhHHHHHhhhcC----CCCCCCcEEEEEEeCC-eEEEeeeCCceEEEEeeccCCCCCCCcccccceeEEEeCCC
Q 019889 136 LDGFRKTDESLLQESVSG----GWQDGATAVCIWILGR-TVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRV 210 (334)
Q Consensus 136 ~~a~~~~~~~l~~~~~~~----~~~~GtT~~~~~i~~~-~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~~~~~~~LT~D 210 (334)
..+|..+|+.+....... ...+|||++++++.++ ++++|||||||+|++|++ ++++||.|
T Consensus 190 ~~a~~~~n~~i~~~~~~~~~~~~~~~GtT~~~~li~~~~~l~vanvGDSRayl~r~g---------------~~~~LT~D 254 (389)
T 4da1_A 190 TLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKG---------------KPMKLTID 254 (389)
T ss_dssp HHHHHHHHHHHHHHHHHSSCGGGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETT---------------EEEECCCC
T ss_pred HHHHHHHHHHHHHHhhhccccccCCCCCeEEEEEEEcCCeEEEEEeeccEEEEEECC---------------EeEEeCCC
Confidence 999999999998765322 3358999999999876 999999999999999998 99999999
Q ss_pred CCCCChhHHHHHHhcCCEEeeC----CeecCcccCcccccCccccCCCceecceeEEEEecCC-CeEEEEecCCCccccC
Q 019889 211 HKAIYPQERARIQKSGGTVSSN----GRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTER-DHFIILGCDGLWGVFG 285 (334)
Q Consensus 211 H~~~~~~E~~ri~~~g~~v~~~----~r~~g~~~~tRalGd~~~k~~~v~~~P~i~~~~l~~~-d~~llL~SDGl~d~l~ 285 (334)
|++.++.|++||...||.+..+ .++++.+++|||||+..+|+++++++|++..+++.++ ++|||||||||||+++
T Consensus 255 Hs~~~~~E~~Ri~~~gG~v~~~~~~~~~~~g~l~ltRalGd~~~k~~~v~~~pdi~~~~l~~~~dd~llL~SDGL~d~l~ 334 (389)
T 4da1_A 255 HTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVN 334 (389)
T ss_dssp CCTTSHHHHHHHHHHTCCEECC---CCEETTTBSCSBCEECGGGGGGTCBCCCEEEEEECCSSSCEEEEEECHHHHTTCC
T ss_pred CCCCCHHHHHHHHHcCCeEecccCCCccCCCeEeeEeeeCChhhccCCCCCCCceEEEEEcCCCCcEEEEEeCCcccCCC
Confidence 9999999999999999999764 4889999999999999999999999999999999864 6699999999999999
Q ss_pred hHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCCccEEEEEEecC
Q 019889 286 PSDAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRH 333 (334)
Q Consensus 286 ~~ei~~~~~~~~~~~~~~~~~a~~l~~~A~~~~g~~DNiTvivv~~~~ 333 (334)
++++++++.. ..+++++|+.|++.|+ .+|+.||||||||+|..
T Consensus 335 ~~ei~~il~~----~~~~~~~a~~Lv~~A~-~~g~~DNiTvivv~~~~ 377 (389)
T 4da1_A 335 SQEICDFVNQ----CHDPNEAAHAVTEQAI-QYGTEDNSTAVVVPFGA 377 (389)
T ss_dssp HHHHHHHHHH----SSSHHHHHHHHHHHHH-HHTCCSCEEEEEEEECC
T ss_pred HHHHHHHHHh----cCCHHHHHHHHHHHHH-HcCCCCCeEEEEEEecC
Confidence 9999999976 5689999999999997 68999999999999864
No 10
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}
Probab=100.00 E-value=8.2e-50 Score=374.81 Aligned_cols=251 Identities=27% Similarity=0.385 Sum_probs=211.1
Q ss_pred ccceeeeeecccCCCCCCCceEEEeccCCCCCCCCCceeEEEEEeCCCchHHHHHHHHHHHHHHHhcCCChhhhcHHHHH
Q 019889 53 FVEIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPRELLDVKAAK 132 (334)
Q Consensus 53 ~~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~l~~~l~~~~~~~~~~~~~~~~ 132 (334)
...+.++.++++|+|+.|||++++..++ +...+..||+|||||||+.+|++|++.+...|.+.. . .. .
T Consensus 10 ~~~~~~~~~s~~G~R~~nED~~~v~~~~----~~~~~~~lf~VfDGHGG~~as~~a~~~l~~~l~~~~---~-~~----~ 77 (364)
T 2isn_A 10 EWYTTTVAATMLGRRPTDEDAILVSAPA----TSRPNVRIKAVFDGHAGEATSQYCAKHAAKHLGKLS---E-FT----F 77 (364)
T ss_dssp ETTEEEEEEEECTTSSSCCEEEEEECC--------CCEEEEEEEEEESCSHHHHHHHHHHHHHHTTCS---S-CC----H
T ss_pred CCceEEEEEEcCCCCCcCCCeeEEeccC----CCCCCeEEEEEEECCCCHHHHHHHHHHHHHHHHHhh---c-cc----H
Confidence 3457899999999999999999986432 234467899999999999999999999999875421 1 11 3
Q ss_pred HHHHHHHHhhhHHHHHhhhcCCCCCCCcEEEEEEeC--------------------------------------------
Q 019889 133 KAILDGFRKTDESLLQESVSGGWQDGATAVCIWILG-------------------------------------------- 168 (334)
Q Consensus 133 ~~l~~a~~~~~~~l~~~~~~~~~~~GtT~~~~~i~~-------------------------------------------- 168 (334)
+.|+++|..+|+.+.+..... ..+|||++++++.+
T Consensus 78 ~~l~~a~~~~d~~i~~~~~~~-~~~GtT~v~~~i~~~~~p~~~~~~g~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~ 156 (364)
T 2isn_A 78 AEVKKACLSLDAEIIRKLGPK-HVAGSTGIIVAIERLSAPVVENVVGREIVPRAHEETFVPLEKLIQEEEEAEHPELVGR 156 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHCSS-SCCEECEEEEEEEECSSCEEEEEETTEECCC-----CCCHHHHHHHHHHC-----CCS
T ss_pred HHHHHHHHHHHHHHHHhcccC-CCCCcceehhhhhccccccccccccccccccccccchhhhhhhhhhhhhccccccccc
Confidence 678999999999998765433 47899999988852
Q ss_pred ----------------CeEEEeeeCCceEEEE-eeccCCCCCCCcccccceeEEEeCCCCCCCChhHHHHHHhcCCEEee
Q 019889 169 ----------------RTVFVANIGDAKAVVA-RSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSS 231 (334)
Q Consensus 169 ----------------~~l~vanvGDSR~~l~-r~~~~~~~~~~~~~~~~~~~~~LT~DH~~~~~~E~~ri~~~g~~v~~ 231 (334)
.++|+|||||||+|++ |++ ++.+||+||++.++.|+.||.++||.+..
T Consensus 157 ~~~~~~~~~~~~~~g~~~l~vanvGDSRayl~~r~g---------------~~~~LT~DH~~~~~~e~~rI~~~gG~v~~ 221 (364)
T 2isn_A 157 YPRVPDVQQKTIPAGSFLVTAINIGDSRATLIHSDG---------------GLTRLSKDHKPNHPTEASRIEKAGGSVET 221 (364)
T ss_dssp SCCCCCCEEEEECTTCEEEEEEEESSCEEEEECTTS---------------CEEECCCCCCTTSHHHHHHHHHTTCCEEE
T ss_pred ccccccccccccccCccEEEEEECccCEEEEEeeCC---------------EEEEcCcCCCCCCHHHHHHHHHcCCeEec
Confidence 3899999999999999 566 99999999999999999999999999876
Q ss_pred CC--eecCcccCcccccCccccC--------CCceecceeEEEEecCCCeEEEEecCCCccccC--hHHHHHHHHHH-HH
Q 019889 232 NG--RLQGRLEVSRAFGDRQFKK--------FGVVATPDIHSFEVTERDHFIILGCDGLWGVFG--PSDAVEFVQKL-LK 298 (334)
Q Consensus 232 ~~--r~~g~~~~tRalGd~~~k~--------~~v~~~P~i~~~~l~~~d~~llL~SDGl~d~l~--~~ei~~~~~~~-~~ 298 (334)
.+ |+.+.+++||||||..+|. .+|+++|++..+++.++| |||||||||||+++ ++++.+++... +.
T Consensus 222 ~~~~rv~g~l~ltRalGd~~~k~~~~l~~~~~~v~~~Pdv~~~~l~~~D-~llL~SDGl~d~l~~~~~~v~~~~~~~~~~ 300 (364)
T 2isn_A 222 FDVPRVDGVLALSRAFGDSDFKMNPNLPPEEQKVIAVPDVRQFYALSSD-LLLLACDGVYEPSGMDWAYVRDLTVAEMQR 300 (364)
T ss_dssp SSSEEETTTBSCSBCEECGGGSCCCSSCGGGSSSBCCCEEEEEEECTTC-EEEEECHHHHCSSSCCHHHHHHHHHHHHHH
T ss_pred CCCcccCCceeeEEEecchhhccccccCcccCceEEEeEEEEEECCCCC-EEEEEcCCCCCCCCCCHHHHHHHHHHHHhh
Confidence 43 7788899999999999874 457899999999999988 99999999999976 88998876543 34
Q ss_pred cCCCHHHHHHHHHHHHHHhCCCCCccEEEEEEecC
Q 019889 299 EGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRH 333 (334)
Q Consensus 299 ~~~~~~~~a~~l~~~A~~~~g~~DNiTvivv~~~~ 333 (334)
...+++.+|++|++.|+ .+|+.||||||||+|.+
T Consensus 301 ~~~~~~~~a~~Lv~~A~-~~g~~DNiTvivv~~~~ 334 (364)
T 2isn_A 301 SKGDLEEVAARVMDYAY-DMNSQDNISVMLVAFHN 334 (364)
T ss_dssp TTSCHHHHHHHHHHHHH-HTTCCSCEEEEEEEECS
T ss_pred cCCCHHHHHHHHHHHHH-hcCCCCCEEEEEEEcCC
Confidence 45689999999999997 69999999999999864
No 11
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}
Probab=100.00 E-value=1.1e-50 Score=380.84 Aligned_cols=253 Identities=20% Similarity=0.303 Sum_probs=212.6
Q ss_pred ecccCCCC---CCCceEEEeccCCCCCCCCCceeEEEEEeCCCchHHHHHHHHHHHHHHHhcCCChhhhcHHHHHHHHHH
Q 019889 61 AEDKGSRH---TMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPRELLDVKAAKKAILD 137 (334)
Q Consensus 61 ~s~~G~R~---~nED~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~l~~~l~~~~~~~~~~~~~~~~~~l~~ 137 (334)
++.+|+|+ .|||++++.. ...+..||||||||||+.+|++|++.++..|....+. .......+.++|++
T Consensus 25 ~~~~G~r~~~~~nED~~~~~~-------~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~l~-~~~~~~~~~~~l~~ 96 (358)
T 2irm_A 25 YKDDGRRCEGYESRDKKCLCI-------SDNNTSLYAILSGHNGVTVAENALQEMAAELLLGQLN-VCNTDEAVKELIRQ 96 (358)
T ss_dssp ECSSSCEEECSSCCEEEEEEE-------CSSSEEEEEEEEEESCSHHHHHHHHHHHHHSSSSTTT-TCCSHHHHHHHHHH
T ss_pred eecCCCCCCCCCCCceEEEEE-------CCCCEEEEEEEcCCCCHHHHHHHHHHHHHHHHHhhhc-cccchhhHHHHHHH
Confidence 67799877 5999998753 2346689999999999999999999999988652221 12334678899999
Q ss_pred HHHhhhHHHHHhhh-------------------------------------cCCCCCCCcEEEEEEeCCeEEEeeeCCce
Q 019889 138 GFRKTDESLLQESV-------------------------------------SGGWQDGATAVCIWILGRTVFVANIGDAK 180 (334)
Q Consensus 138 a~~~~~~~l~~~~~-------------------------------------~~~~~~GtT~~~~~i~~~~l~vanvGDSR 180 (334)
+|.++|+.+..... .....+|||++++++.++++|||||||||
T Consensus 97 a~~~~d~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTav~~li~~~~l~vAnvGDSR 176 (358)
T 2irm_A 97 SFMSVEKGYFDSINPHVATKTAIQLHLSADGMNQYEISQQFENVLQKLDSLNNALSVGSSAVLALIHRSHLYLGNIGNCR 176 (358)
T ss_dssp HHHHHHHHHHHHSHHHHHHHHHHHHTTC---------------CCCTHHHHHTTTTCEEEEEEEEEESSEEEEEEESSCE
T ss_pred HHHHHHHHHHHHHHhhhhccccccccccccccccccchhhccchhhhcccccCCCCCCCcEEEEEEECCEEEEEEcccCe
Confidence 99999999875321 12346999999999999999999999999
Q ss_pred EEEEeeccCCCCCCCcccccceeEEEeCCCCCCCChhHHHHHHhcCCEEeeCCeecCcccCcccccCccccC--------
Q 019889 181 AVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKK-------- 252 (334)
Q Consensus 181 ~~l~r~~~~~~~~~~~~~~~~~~~~~LT~DH~~~~~~E~~ri~~~g~~v~~~~r~~g~~~~tRalGd~~~k~-------- 252 (334)
+|++|.. ..+.|++++||+||++.++.|++||.+.||.+.. +|+.|.+ +||||||..+|.
T Consensus 177 a~l~r~~----------~~g~~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~-~r~~g~l-lTRalGd~~~K~~~~~~~~~ 244 (358)
T 2irm_A 177 ALLCKTD----------EHDTLTVTQLSVDHNLLNAEEAARLFRLGLMAQN-FEGVPLY-STRCIGNYLGKAGYKDCNFL 244 (358)
T ss_dssp EEEEECC----------TTCSCEEEECSCCCBTTSHHHHHHHHTTTCCGGG-GTTCTTC-BSBCEECHHHHTTGGGSSSS
T ss_pred EEEEEec----------CCCceeeEeCCCCCCCCCHHHHHHHHHcCCeEec-cCcCCEE-cccCCcCHHHhccccccccc
Confidence 9999973 1124789999999999999999999999999864 5777766 999999988774
Q ss_pred -----CCceecceeEE-EEecCCCeEEEEecCCCccccC----------hHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Q 019889 253 -----FGVVATPDIHS-FEVTERDHFIILGCDGLWGVFG----------PSDAVEFVQKLLKEGLSVTAVSRRLVREAVL 316 (334)
Q Consensus 253 -----~~v~~~P~i~~-~~l~~~d~~llL~SDGl~d~l~----------~~ei~~~~~~~~~~~~~~~~~a~~l~~~A~~ 316 (334)
.+++++|++.. +++.++|.|||||||||||+++ +++|++++...+....+++.+|++|++.|+.
T Consensus 245 ~~~~~~~v~~~Pdi~~~~~l~~~d~fllL~SDGl~d~l~~~~~~~~~~~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~ 324 (358)
T 2irm_A 245 SSATAEPVIFEPEIVGGIQITPACRFLVLMSSGLCRALHEIFPGDASTGNRELVRMISEEFQNQSTLGGVAQSVVHRIVQ 324 (358)
T ss_dssp TTCSSCSSBCCCEEEEEEECCTTEEEEEEECHHHHHHHHHHSCSSSSHHHHHHHHHHHHHTTTCCSHHHHHHHHHHHHHH
T ss_pred cccCCCCEeccCeEEEEEEeCCCCcEEEEECCCcccCccccccccccccHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 46899999995 9999999899999999999999 9999999998776667999999999999964
Q ss_pred h--------------CC--CCCccEEEEEEecC
Q 019889 317 E--------------RR--CKDNCTAIVIIFRH 333 (334)
Q Consensus 317 ~--------------~g--~~DNiTvivv~~~~ 333 (334)
. +| +.||||||||+|.+
T Consensus 325 ~~~~~~~~~~~~~~~~Gg~~~DNiTvivv~~~~ 357 (358)
T 2irm_A 325 AHHDTYMQLVEEHRSVTFNSRDDVTLLIRNFNY 357 (358)
T ss_dssp HHHHHHHHHHSSSCCCCCCEECCEEEEEEESCC
T ss_pred hhhhhhccccccccccCCCCCCCeEEEEEeCCC
Confidence 2 47 89999999999864
No 12
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A
Probab=100.00 E-value=9.4e-51 Score=386.07 Aligned_cols=261 Identities=20% Similarity=0.322 Sum_probs=218.1
Q ss_pred cceeeeeecccCCCC--------CCCceEEEeccCCCCCCCCCceeEEEEEeCCCchHHHHHHHHHHHHHHHhcCCChhh
Q 019889 54 VEIEADAAEDKGSRH--------TMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPREL 125 (334)
Q Consensus 54 ~~~~~~~~s~~G~R~--------~nED~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~l~~~l~~~~~~~~~ 125 (334)
..+.+|.++++|+|+ .|||++++.. ...+..||||||||||+.+|++|++.++..|....+...
T Consensus 25 ~~~~~G~~~~~G~r~~g~~~~r~~nED~~~~~~-------~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~~~~- 96 (401)
T 2j4o_A 25 HLSGVGSASNRSYSADGKGTESHPPEDSWLKFR-------SENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAE- 96 (401)
T ss_dssp TTEEEEEECCEEECSSSSCEECCCCCEEEEEEE-------ETTTEEEEEEEEEESSSHHHHHHHHHHHHTTSSSSCCTT-
T ss_pred ccCceeEEecccccccccccCCCCCCceEEEec-------CCCCeEEEEEEcCCCCHHHHHHHHHHHHHHHHHhhhhcc-
Confidence 367899999999888 5999998753 233568999999999999999999999988865322211
Q ss_pred hcHHHHHHHHHHHHHhhhHHHHHhhh------------------------------------cCCCCCCCcEEEEEEeCC
Q 019889 126 LDVKAAKKAILDGFRKTDESLLQESV------------------------------------SGGWQDGATAVCIWILGR 169 (334)
Q Consensus 126 ~~~~~~~~~l~~a~~~~~~~l~~~~~------------------------------------~~~~~~GtT~~~~~i~~~ 169 (334)
.....+.++|.++|..+|+.+.+... .....+|||++++++.++
T Consensus 97 ~~~~~~~~~l~~af~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTa~~~li~~~ 176 (401)
T 2j4o_A 97 HAEADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLNN 176 (401)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCSSCSCGGGHHHHHHHHHHHHHHCCEEEEEEEEEETT
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccccccccchhhhhhhcccccCCCccCEEEEEEECC
Confidence 23457889999999999988765310 012358999999999999
Q ss_pred eEEEeeeCCceEEEEeeccCCCCCCCcccccceeEEEeCCCCCCCChhHHHHHHhcCCEEee--CCeecCcccCcccccC
Q 019889 170 TVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSS--NGRLQGRLEVSRAFGD 247 (334)
Q Consensus 170 ~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~~~~~~~LT~DH~~~~~~E~~ri~~~g~~v~~--~~r~~g~~~~tRalGd 247 (334)
++|||||||||+|++|.+. +.|++++||.||++.++.|++||.+.||.+.. ..|+.|.+++||||||
T Consensus 177 ~l~vanvGDSRa~l~r~~~-----------~g~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~~~~r~~g~l~vtRalGd 245 (401)
T 2j4o_A 177 KLYVANVGTNRALLCKSTV-----------DGLQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQVGIICGQESTRRIGD 245 (401)
T ss_dssp EEEEEEESSCEEEEEEECS-----------SSEEEEECSCCCSTTSHHHHHHHHTTTCCHHHHHHHCCBTTBCCSBCEEC
T ss_pred EEEEEEccCceEEEEEcCC-----------CCceEEECCCCCCCCCHHHHHHHHHcCCCeeeccCccccCCcccccccCC
Confidence 9999999999999999861 12689999999999999999999999998642 3477888999999999
Q ss_pred ccccC-------------CCceecceeEE-EEecCCCeEEEEecCCCcccc--------ChHHHHHHHHHHHHcCCCHHH
Q 019889 248 RQFKK-------------FGVVATPDIHS-FEVTERDHFIILGCDGLWGVF--------GPSDAVEFVQKLLKEGLSVTA 305 (334)
Q Consensus 248 ~~~k~-------------~~v~~~P~i~~-~~l~~~d~~llL~SDGl~d~l--------~~~ei~~~~~~~~~~~~~~~~ 305 (334)
..+|. ++++++|++.. +++.++|+|||||||||||+| +++||++++...+....+++.
T Consensus 246 ~~~k~~~~~~~~~~~~~~~~v~~~Pdv~~~~~l~~~d~flvLaSDGlwd~l~~~~~~~~s~~ei~~~v~~~l~~~~~~~~ 325 (401)
T 2j4o_A 246 YKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPGQANQEIAAMIDTEFAKQTSLDA 325 (401)
T ss_dssp HHHHHSGGGSTTTTTCSSCSSBCCCEEEEEEECTTCCEEEEEECHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHCSSHHH
T ss_pred HhhcccccccccccccCCCCeeccceEEEeEEeCCCCcEEEEEccchhhcccccccCCCCHHHHHHHHHHHHhcCCCHHH
Confidence 88773 46899999996 999999989999999999999 899999999987766678999
Q ss_pred HHHHHHHHHHH------hCCC--------CCccEEEEEEecC
Q 019889 306 VSRRLVREAVL------ERRC--------KDNCTAIVIIFRH 333 (334)
Q Consensus 306 ~a~~l~~~A~~------~~g~--------~DNiTvivv~~~~ 333 (334)
+|+.|++.|+. .+|+ .||||||||+|.+
T Consensus 326 ~a~~Lv~~A~~~~~~a~~~G~~~~~~~~~~DNiTvivv~~~~ 367 (401)
T 2j4o_A 326 VAQAVVDRVKRIHSDTFASGGERARFCPRHEDMTLLVRNFGY 367 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHSCSSGGGGCSEECCEEEEEEEEBC
T ss_pred HHHHHHHHHHHhhhhhhhcCCcccccCCCCCCeEEEEEEcCC
Confidence 99999999863 2565 8999999999875
No 13
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}
Probab=100.00 E-value=2.2e-50 Score=379.93 Aligned_cols=249 Identities=26% Similarity=0.355 Sum_probs=208.3
Q ss_pred cccceeeeeecccCCCCCCCc-----eEEEeccCCCCCCCCCceeEEEEEeCCCchHHHHHHHHHHHHHHHhcCCChhhh
Q 019889 52 DFVEIEADAAEDKGSRHTMED-----ASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPRELL 126 (334)
Q Consensus 52 ~~~~~~~~~~s~~G~R~~nED-----~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~l~~~l~~~~~~~~~~ 126 (334)
....+.++.++++|+|+.||| ++++... ++...+..||||||||||+.+|++|++.++..|.+.. .
T Consensus 9 ~~~~~~~~~~s~~G~R~~~ED~~neD~~~~~~~----~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~---~-- 79 (377)
T 3d8k_A 9 EEGRTVCASATSRNRRPTSESPHSDDVVVVEGM----LRGRPETRVHAMFDGFQGRHSAMWLAQNVMNYLNDLR---D-- 79 (377)
T ss_dssp THHHHHHHHTTTCEEEEEECC---CEEEEEEEE----CSSCTTEEEEEEEEBSSSSHHHHHHHHHHHHHHTTCS---S--
T ss_pred cCCcEEEEEEEccCCCCccccchhcceEEEecc----cCCCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHHhc---c--
Confidence 344567788999999998755 4454322 1234567899999999999999999999999885421 1
Q ss_pred cHHHHHHHHHHHHHhhhHHHHHhhhcCCCCCCCcEEEEEEe---------------------------------------
Q 019889 127 DVKAAKKAILDGFRKTDESLLQESVSGGWQDGATAVCIWIL--------------------------------------- 167 (334)
Q Consensus 127 ~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~GtT~~~~~i~--------------------------------------- 167 (334)
...++|+++|.++|+.+..... .+|||++++++.
T Consensus 80 ---~~~~al~~af~~~d~~l~~~~~----~~GtTa~~~~i~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~g~ta~a~va 152 (377)
T 3d8k_A 80 ---VNEEEITRQFERMDGDLRAANL----PGGSSALIIFVRYEKKPTEARVVGRQIVPEGAKEFTSVAEALGGPLMPVVA 152 (377)
T ss_dssp ---SSHHHHHHHHHHHHHHHHHHTC----CCCBCEEEEEEEEESSCCCEEEETTEEECCC---CCCHHHHSSCCCCCCEE
T ss_pred ---cHHHHHHHHHHHHHHHHHhccc----CCCCceEEEEEecccccccccccccccccccccccccccccccccccccee
Confidence 1257899999999999987643 589999988884
Q ss_pred ------------CCeEEEeeeCCceEEEEeeccCCCCCCCcccccceeEEEeCCCCCCCChhHHHHHHhcCCEEee-CC-
Q 019889 168 ------------GRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSS-NG- 233 (334)
Q Consensus 168 ------------~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~~~~~~~LT~DH~~~~~~E~~ri~~~g~~v~~-~~- 233 (334)
++++|||||||||+|++|++ ++++||+||++.++.|+.||.++||.+.. ++
T Consensus 153 li~~~~p~~~~~~~~l~vanvGDSRa~l~r~g---------------~~~~LT~DH~~~~~~E~~RI~~~gg~v~~~~g~ 217 (377)
T 3d8k_A 153 MNFRRDPRAAKGIYTIHVASLGNSRCVLKSGR---------------TAIHLSTPHTASSHKERHRVQAAGGVFTTVNGE 217 (377)
T ss_dssp ECGGGCGGGTTCEEEEEEEEESSCEEEEEETT---------------EEEESSCCCSSSSHHHHHHHHTTTCCEEECSSS
T ss_pred eecccccccccCCCeEEEEEcccceEEEEECC---------------EEEECCcCCCCCCHHHHHHHHHcCCEEEecCCc
Confidence 14899999999999999988 99999999999999999999999999874 45
Q ss_pred -eecCcccCcccccCccccC--------CCceecceeEEEEecCCCeEEEEecCCCccccChHHHHHHHHHHH-HcCCCH
Q 019889 234 -RLQGRLEVSRAFGDRQFKK--------FGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLL-KEGLSV 303 (334)
Q Consensus 234 -r~~g~~~~tRalGd~~~k~--------~~v~~~P~i~~~~l~~~d~~llL~SDGl~d~l~~~ei~~~~~~~~-~~~~~~ 303 (334)
|+.|.+++||||||..+|. ++++++|++..+++.++| +||||||||||+++++|+++.+.... ....++
T Consensus 218 ~rv~G~l~vtRalGd~~~k~~~~~~~~~~~v~~~Pdv~~~~l~~~D-~llL~SDGl~d~ls~~e~v~~v~~~~~~~~~~~ 296 (377)
T 3d8k_A 218 LLLGGVVPMTRAFGSFDFKKGGQGKLQQDLVSAVPDVTTFFAYPGD-DIVAGTAGAFAHFRSHAAIAAAIALYPVSPETV 296 (377)
T ss_dssp EEETTTBSCSBCSSCGGGSCC---CCSSCSSBCCCEEEEEEECTTC-EEEEECGGGGCSCSSHHHHHHHHTTSCCCGGGH
T ss_pred EEEcCceecceeecChhhhcccccccccCccccCCcEEEEEcCCCC-EEEEEECCcccCCCcHHHHHHHHHHhhccCCCH
Confidence 8999999999999999884 458899999999999998 99999999999999999887554321 113478
Q ss_pred HHHHHHHHHHHHHhCCCCCccEEEEEEecC
Q 019889 304 TAVSRRLVREAVLERRCKDNCTAIVIIFRH 333 (334)
Q Consensus 304 ~~~a~~l~~~A~~~~g~~DNiTvivv~~~~ 333 (334)
+.+|++|++.|+ .+|+.||||||||+|..
T Consensus 297 ~~~a~~Lv~~A~-~~g~~DNiTvivv~~~~ 325 (377)
T 3d8k_A 297 LDAAKAMVVNAK-RRKVTKNISTFVRHLPE 325 (377)
T ss_dssp HHHHHHHHHTTT-TSSCCSCCCEEEEECCS
T ss_pred HHHHHHHHHHHH-hcCCCCCEEEEEEEecC
Confidence 999999999996 79999999999999864
No 14
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}
Probab=100.00 E-value=5.7e-45 Score=325.53 Aligned_cols=241 Identities=17% Similarity=0.255 Sum_probs=200.1
Q ss_pred cceeeeeecccCC-CCCCCceEEEeccCCCCCCCCCceeEEEEEeCCCchHHHHHHHHHHHHHHHhcCCChhhhcHHHHH
Q 019889 54 VEIEADAAEDKGS-RHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPRELLDVKAAK 132 (334)
Q Consensus 54 ~~~~~~~~s~~G~-R~~nED~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~l~~~l~~~~~~~~~~~~~~~~ 132 (334)
..+.++.++++|. |+.|||++++.... .+..+|+|||||||+.+|++||+.+++.+.+.+..........+.
T Consensus 4 ~~~~~~~~s~~G~~r~~neD~~~~~~~~-------~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~ 76 (250)
T 2pk0_A 4 KYMEISLLTDIGQRRSNNQDFINQFENK-------AGVPLIILADGMGGHRAGNIASEMTVTDLGSDWAETDFSELSEIR 76 (250)
T ss_dssp CCEEEEEEEECCTTCSCCCEEEEEEECT-------TCCEEEEEEEEECTTTHHHHHHHHHHHHHHHHHTTCCCCSHHHHH
T ss_pred ceEEEEEecCCCCCCCcCCCceEeccCC-------CCcEEEEEEeCCCCcHHHHHHHHHHHHHHHHHHhhcccCChhhHH
Confidence 3578899999997 99999999986431 245899999999999999999999999887333322221346678
Q ss_pred HHHHHHHHhhhHHHHHhhhcC-CCCCCCcEEEEEEeCCeEEEeeeCCceEEEEeeccCCCCCCCcccccceeEEEeCCCC
Q 019889 133 KAILDGFRKTDESLLQESVSG-GWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVH 211 (334)
Q Consensus 133 ~~l~~a~~~~~~~l~~~~~~~-~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~~~~~~~LT~DH 211 (334)
.+|.++|..+|+.+....... ...+|||++++++.+++++++|+||||+|++|++ ++.+||.||
T Consensus 77 ~~l~~~~~~~~~~l~~~~~~~~~~~~gtT~~~~~i~~~~l~~anvGDsr~~l~r~g---------------~~~~lt~dh 141 (250)
T 2pk0_A 77 DWMLVSIETENRKIYELGQSDDYKGMGTTIEAVAIVGDNIIFAHVGDSRIGIVRQG---------------EYHLLTSDH 141 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCTTCEECEEEEEEETTEEEEEEESSCEEEEEETT---------------EEEECCCCC
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCCcceEEEEEEECCeEEEEEeCCCeEEEEcCC---------------cEEEeCCCC
Confidence 899999999999998776433 2458999999999999999999999999999988 999999999
Q ss_pred CCCChhHHHHHHhcCCEEeeC-CeecCcccCcccccCccccCCCceecceeEEEEecCCCeEEEEecCCCccccChHHHH
Q 019889 212 KAIYPQERARIQKSGGTVSSN-GRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAV 290 (334)
Q Consensus 212 ~~~~~~E~~ri~~~g~~v~~~-~r~~g~~~~tRalGd~~~k~~~v~~~P~i~~~~l~~~d~~llL~SDGl~d~l~~~ei~ 290 (334)
++.++ +.+.|+..... ..+++.+.+||+||+.. .++|++..+++.++| +||||||||||+++++++.
T Consensus 142 ~~~~~-----~~~~g~i~~~~~~~~~~~~~ltralG~~~------~~~p~~~~~~l~~gd-~lll~SDGl~d~l~~~~i~ 209 (250)
T 2pk0_A 142 SLVNE-----LVKAGQLTEEEAASHPQKNIITQSIGQAN------PVEPDLGVHLLEEGD-YLVVNSDGLTNMLSNADIA 209 (250)
T ss_dssp BHHHH-----HHHTTSSCHHHHHTCCSCCCBSCCBSCSS------CCCCEEEEEECCTTC-EEEEECHHHHTTSCHHHHH
T ss_pred CHHHH-----HHHcCCCCHHHHHhCCCcceEEeecCCCC------CccceEEEEEcCCCC-EEEEECCCCCCCcCHHHHH
Confidence 98433 33444332211 14678899999999986 678999999999988 9999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCCccEEEEEEecC
Q 019889 291 EFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRH 333 (334)
Q Consensus 291 ~~~~~~~~~~~~~~~~a~~l~~~A~~~~g~~DNiTvivv~~~~ 333 (334)
+++.. ..+++.+|+.|++.|. .+++.||+||||+++..
T Consensus 210 ~~~~~----~~~~~~~a~~L~~~a~-~~g~~DniTvivv~~~~ 247 (250)
T 2pk0_A 210 TVLTQ----EKTLDDKNQDLITLAN-HRGGLDNITVALVYVES 247 (250)
T ss_dssp HHHTS----SSCHHHHHHHHHHHHH-HTTCCSCEEEEEEEECC
T ss_pred HHHhc----CCCHHHHHHHHHHHHH-HcCCCCCeEEEEEEeeC
Confidence 98875 5689999999999996 68999999999999864
No 15
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A
Probab=100.00 E-value=8.2e-44 Score=315.56 Aligned_cols=231 Identities=20% Similarity=0.220 Sum_probs=190.2
Q ss_pred cceeeeeecccCC-CCCCCceEEEeccCCCCCCCCCceeEEEEEeCCCchHHHHHHHHHHHHHHHhcCCChhhhcHHHHH
Q 019889 54 VEIEADAAEDKGS-RHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPRELLDVKAAK 132 (334)
Q Consensus 54 ~~~~~~~~s~~G~-R~~nED~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~l~~~l~~~~~~~~~~~~~~~~ 132 (334)
+.+.++..+++|+ |+.|||++++. ..+|+|||||||+.+|++||+.+++.+.+..... + ...+.
T Consensus 3 ~~~~~~~~s~~G~~r~~nED~~~~~------------~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~--~-~~~~~ 67 (237)
T 1txo_A 3 LVLRYAARSDRGLVRANNEDSVYAG------------ARLLALADGMGGHAAGEVASQLVIAALAHLDDDE--P-GGDLL 67 (237)
T ss_dssp CEEEEEEEEECCSSCSSCCEEEEEC------------SSEEEEEEEECTTTHHHHHHHHHHHHHGGGGSSC--C-CSCHH
T ss_pred eEEEEEEecCCCCCCCcCCCccccC------------CCEEEEEeCCCCcHHHHHHHHHHHHHHHHHhhhC--C-chhHH
Confidence 5688999999995 99999999761 2689999999999999999999999887643211 1 12467
Q ss_pred HHHHHHHHhhhHHHHHhhhcC--CCCCCCcEEEEEEeCCeEEEeeeCCceEEEEeeccCCCCCCCcccccceeEEEeCCC
Q 019889 133 KAILDGFRKTDESLLQESVSG--GWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRV 210 (334)
Q Consensus 133 ~~l~~a~~~~~~~l~~~~~~~--~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~~~~~~~LT~D 210 (334)
++|.++|..+|..+.+..... ...+|||++++++.+++++++|+||||+|++|++ ++.+||.|
T Consensus 68 ~~l~~a~~~~~~~i~~~~~~~~~~~~~gtT~~~~~i~~~~l~~a~vGDsr~~l~r~g---------------~~~~lt~d 132 (237)
T 1txo_A 68 AKLDAAVRAGNSAIAAQVEMEPDLEGMGTTLTAILFAGNRLGLVHIGDSRGYLLRDG---------------ELTQITKD 132 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCGGGTTCEECEEEEEEETTEEEEEEESSCEEEEEETT---------------EEEECSCC
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCCCcceEEEEEEECCEEEEEEEccCcEEEEeCC---------------EeEEeCCC
Confidence 889999999999988765432 2358999999999999999999999999999988 99999999
Q ss_pred CCCCChhHHHHHHhcCCEEeeC-CeecCcccCcccccCccccCCCceecceeEEEEecCCCeEEEEecCCCccccChHHH
Q 019889 211 HKAIYPQERARIQKSGGTVSSN-GRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDA 289 (334)
Q Consensus 211 H~~~~~~E~~ri~~~g~~v~~~-~r~~g~~~~tRalGd~~~k~~~v~~~P~i~~~~l~~~d~~llL~SDGl~d~l~~~ei 289 (334)
|++. .++...|...... ...+.++.+||++|+. .++|++..+++.++| +||||||||||+++++++
T Consensus 133 h~~~-----~~~~~~G~i~~~~~~~~~~~~~~tr~lg~~-------~~~p~~~~~~l~~~d-~lvl~SDGl~d~l~~~~i 199 (237)
T 1txo_A 133 DTFV-----QTLVDEGRITPEEAHSHPQRSLIMRALTGH-------EVEPTLTMREARAGD-RYLLCSDGLSDPVSDETI 199 (237)
T ss_dssp CBHH-----HHHHHTTSSCTTGGGGCTTTTCBCCCBSSS-------CCCCEEEEEECCTTC-EEEEECHHHHTTSCHHHH
T ss_pred CCHH-----HHHHHcCCCCHHHHhhCccccceeeccCCC-------CccceEEEEecCCCC-EEEEECCCCCCCCCHHHH
Confidence 9974 2344444322211 1346677899999964 568999999999998 889999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCCccEEEEEEecC
Q 019889 290 VEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRH 333 (334)
Q Consensus 290 ~~~~~~~~~~~~~~~~~a~~l~~~A~~~~g~~DNiTvivv~~~~ 333 (334)
.+++.. .+++.+|+.|++.|+ .+|+.||+||||++|.+
T Consensus 200 ~~~~~~-----~~~~~~a~~L~~~a~-~~g~~DniTvivv~~~~ 237 (237)
T 1txo_A 200 LEALQI-----PEVAESAHRLIELAL-RGGGPDNVTVVVADLEH 237 (237)
T ss_dssp HHHHTS-----SSHHHHHHHHHHHHH-HTTCCSCEEEEEEEEEC
T ss_pred HHHHhc-----CCHHHHHHHHHHHHH-HcCCCCCeEEEEEEeeC
Confidence 999853 389999999999997 68999999999999874
No 16
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A
Probab=100.00 E-value=1.1e-43 Score=315.24 Aligned_cols=233 Identities=21% Similarity=0.269 Sum_probs=180.8
Q ss_pred eeeeeecccCC-CCCCCceEEEeccCCCCCCCCCceeEEEEEeCCCchHHHHHHHHHHHHHHHhcCCChhhhc-HHHHHH
Q 019889 56 IEADAAEDKGS-RHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPRELLD-VKAAKK 133 (334)
Q Consensus 56 ~~~~~~s~~G~-R~~nED~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~l~~~l~~~~~~~~~~~-~~~~~~ 133 (334)
|.++.+|++|. |+.|||++ +... .... +|+|||||||+.+|++||+.+++.+.+.+ .....+ ...+..
T Consensus 1 ~~~~~~s~~G~~r~~neD~~-~~~~-------~~~~-~~~V~DG~Gg~~~~~~as~~~~~~l~~~~-~~~~~~~~~~~~~ 70 (240)
T 2j82_A 1 MDVAGLTDCGLIRKSNQDAF-YIDE-------KHQR-FFIVADGMGGHAGGEEASRLAVDHIRQYL-ETHLEDLQHDPVT 70 (240)
T ss_dssp CEEEEEEECCSSCSSCCEEE-EECT-------TTCC-EEEEEEBC---CHHHHHHHHHHHHHHHHH-HHHHHHHTTSHHH
T ss_pred CeEEEeCCCCCCCCcCCCcc-EecC-------CCCe-EEEEEcCCCCchHHHHHHHHHHHHHHHHH-HhcccccchhHHH
Confidence 46889999997 99999999 6532 1234 99999999999999999999988876421 111101 234678
Q ss_pred HHHHHHHhhhHHHHHhhhcC--CCCCCCcEEEEEEe--CCeEEEeeeCCceEEEEeeccCCCCCCCcccccceeEEEeCC
Q 019889 134 AILDGFRKTDESLLQESVSG--GWQDGATAVCIWIL--GRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTR 209 (334)
Q Consensus 134 ~l~~a~~~~~~~l~~~~~~~--~~~~GtT~~~~~i~--~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~~~~~~~LT~ 209 (334)
+|.++|..+|+.+....... ...+|||++++++. +++++++|+||||+|++|++ ++.+||.
T Consensus 71 ~l~~~~~~~~~~l~~~~~~~~~~~~~gtT~~~~~i~~~~~~l~~anvGDsr~~l~r~~---------------~~~~lt~ 135 (240)
T 2j82_A 71 LLRQAFLAANHAIVEQQRQNSARADMGTTAVVILLDEKGDRAWCAHVGDSRIYRWRKD---------------QLQQITS 135 (240)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCSCTTCCBCEEEEEECTTSSEEEEEEESSCEEEEEETT---------------EEEECSC
T ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEEecCCEEEEEEEccCceEEEeCC---------------EEEEECC
Confidence 89999999999998876443 23579999999999 99999999999999999988 9999999
Q ss_pred CCCCCChhHHHHHHhcCCEEeeCC-eecCcccCcccccCccccCCCceecceeEEEEecCCCeEEEEecCCCccccChHH
Q 019889 210 VHKAIYPQERARIQKSGGTVSSNG-RLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSD 288 (334)
Q Consensus 210 DH~~~~~~E~~ri~~~g~~v~~~~-r~~g~~~~tRalGd~~~k~~~v~~~P~i~~~~l~~~d~~llL~SDGl~d~l~~~e 288 (334)
||++..+ +.+.|+...... .+++.+.+||+||+.. .++|++..+++.++| +||||||||||++++++
T Consensus 136 dh~~~~~-----~~~~g~i~~~~~~~~~~~~~ltralG~~~------~~~p~~~~~~l~~gd-~lll~SDGl~d~l~~~~ 203 (240)
T 2j82_A 136 DHTWIAQ-----AVQLGSLTIEQARQHPWRHVLSQCLGRED------LSQIDIQPIDLEPGD-RLLLCSDGLTEELTDDV 203 (240)
T ss_dssp CCBHHHH-----C----------------CCCBSCCBSCTT------CCCCEEEEEECCTTC-EEEEECHHHHTTSCHHH
T ss_pred CCcHHHH-----HHHcCCCCHHHHhcCCCcCeEeecCCCCC------ceeEEEEEEeeCCCC-EEEEECCCCCCCCCHHH
Confidence 9998432 333443333222 5678899999999976 679999999999998 89999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCCccEEEEEEe
Q 019889 289 AVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIF 331 (334)
Q Consensus 289 i~~~~~~~~~~~~~~~~~a~~l~~~A~~~~g~~DNiTvivv~~ 331 (334)
+.+++. ..+++.+|+.|++.|. .+|+.||+|+||+++
T Consensus 204 i~~~l~-----~~~~~~~a~~l~~~a~-~~g~~DniTvivv~~ 240 (240)
T 2j82_A 204 ISIYLS-----EPNVQKAAAALVDAAK-THGGRDNVTVVVISV 240 (240)
T ss_dssp HHHHHT-----CSSHHHHHHHHHHHHH-HTTCCSCEEEEEEEC
T ss_pred HHHHHc-----cCCHHHHHHHHHHHHH-HcCCCCCeEEEEEeC
Confidence 999886 3589999999999996 689999999999975
No 17
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A
Probab=100.00 E-value=4.2e-42 Score=303.94 Aligned_cols=225 Identities=21% Similarity=0.270 Sum_probs=181.4
Q ss_pred cceeeeeecccCC-CCCCCceEEEeccCCCCCCCCCceeEEEEEeCCCchHHHHHHHHHHHHHHHhcCCChhhhcHHHHH
Q 019889 54 VEIEADAAEDKGS-RHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPRELLDVKAAK 132 (334)
Q Consensus 54 ~~~~~~~~s~~G~-R~~nED~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~l~~~l~~~~~~~~~~~~~~~~ 132 (334)
+.+.++..+++|. |+.|||++++ +..+|+|||||||+ |+.||+.+.+.+.+.+. .. .+ .
T Consensus 4 ~~~~~~~~s~~G~~r~~neD~~~~------------~~~~~~V~DG~Gg~--G~~as~~~~~~l~~~~~-~~-~~----~ 63 (234)
T 2jfr_A 4 SVLSAATATDQGPVRENNQDACLA------------DGILYAVADGFGAR--GHHASATALKTLSAGFA-AA-PD----R 63 (234)
T ss_dssp SEEEEEEEEECCSSCSSCCEEEEE------------ETTEEEEEEEESTT--HHHHHHHHHHHHHHHHH-HS-CS----H
T ss_pred eeEEEEEecCCCCCCCcCCCccee------------CCcEEEEEeCCCcc--HHHHHHHHHHHHHHHHh-cC-Cc----H
Confidence 4678999999997 9999999965 22689999999988 55555554444432110 00 11 5
Q ss_pred HHHHHHHHhhhHHHHHhhhcCCCCCCCcEEEEEEeCCe---EEEeeeCCceEEEEeeccCCCCCCCcccccceeEEEeCC
Q 019889 133 KAILDGFRKTDESLLQESVSGGWQDGATAVCIWILGRT---VFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTR 209 (334)
Q Consensus 133 ~~l~~a~~~~~~~l~~~~~~~~~~~GtT~~~~~i~~~~---l~vanvGDSR~~l~r~~~~~~~~~~~~~~~~~~~~~LT~ 209 (334)
..|.++|..+|+.+..........+|||++++++.+++ ++++|+||||+|++|++ ++.+||.
T Consensus 64 ~~l~~~~~~~~~~l~~~~~~~~~~~gtT~~~~~i~~~~~~~l~~anvGDsr~~l~r~g---------------~~~~lt~ 128 (234)
T 2jfr_A 64 DGLLEAVQQANLRVFELLGDEPTVSGTTLTAVAVFEPGQGGPLVVNIGDSPLYRIRDG---------------HMEQLTD 128 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSSCCEECEEEEECCCGGGTSCEEEEESSCCEEEEETT---------------EEEECSC
T ss_pred HHHHHHHHHHHHHHHHhhccCCCCCCccEEEEEEECCCccEEEEEEEccCceEEEECC---------------EEEEeCC
Confidence 78899999999999887654333389999999999998 99999999999999988 9999999
Q ss_pred CCCCCChhHHHHHHhcCCEEeeC-CeecCcccCcccccCccccCCCceecceeEEEEecCCCeEEEEecCCCccccChHH
Q 019889 210 VHKAIYPQERARIQKSGGTVSSN-GRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSD 288 (334)
Q Consensus 210 DH~~~~~~E~~ri~~~g~~v~~~-~r~~g~~~~tRalGd~~~k~~~v~~~P~i~~~~l~~~d~~llL~SDGl~d~l~~~e 288 (334)
||++.. ++...|...... ..+++.+.+||+||+.. .++|++..+++.++| +||||||||||++++++
T Consensus 129 dh~~~~-----~~~~~g~i~~~~~~~~~~~~~~tralG~~~------~~~~~~~~~~l~~gd-~lll~SDGl~d~~~~~~ 196 (234)
T 2jfr_A 129 DHSVAG-----ELVRMGEITRHEARWHPQRHLLTRALGIGP------HIGPDVFGIDCGPGD-RLLISSDGLFAAADEAL 196 (234)
T ss_dssp CCBHHH-----HHHHTTSSCHHHHTTCTTTTCBSCCBSSSS------CCCCEEEECCCCTTC-EEEEECGGGGTTSCHHH
T ss_pred CCCHHH-----HHHHcCCCCHHHHhcCcccceeeecCcCCC------CceeEEEEEecCCCC-EEEEECCCCccccCHHH
Confidence 999743 344444332221 24678899999999975 779999999999998 89999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCCccEEEEEEe
Q 019889 289 AVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIF 331 (334)
Q Consensus 289 i~~~~~~~~~~~~~~~~~a~~l~~~A~~~~g~~DNiTvivv~~ 331 (334)
+.+++ . ..+++.+|+.|++.|. .+++.||+||||+++
T Consensus 197 i~~~~-~----~~~~~~~a~~l~~~a~-~~g~~DniTvivv~~ 233 (234)
T 2jfr_A 197 IVDAA-T----SPDPQVAVRRLVEVAN-DAGGSDNTTVVVIDL 233 (234)
T ss_dssp HHHHH-T----CSSHHHHHHHHHHHHH-HTTCCSCEEEEEEEE
T ss_pred HHHHH-c----cCCHHHHHHHHHHHHH-HcCCCCCeEEEEEEe
Confidence 99998 4 5689999999999997 689999999999987
No 18
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}
Probab=100.00 E-value=4.2e-39 Score=280.50 Aligned_cols=195 Identities=14% Similarity=0.160 Sum_probs=154.1
Q ss_pred ceeEEEEEeCCCchHHHHHHHHHHHHHHHhcCCChhhhcHHHHHHHHHHHHHhhhHHHHHhhhc--CCCCCCCcEEEEEE
Q 019889 89 RCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPRELLDVKAAKKAILDGFRKTDESLLQESVS--GGWQDGATAVCIWI 166 (334)
Q Consensus 89 ~~~l~~V~DGhGG~~~~~~as~~l~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~--~~~~~GtT~~~~~i 166 (334)
+..+|+|||||||+.+|++||+.+++.+.+.+... .. +.+++..+|+.+...... ....||||++++++
T Consensus 9 ~~~l~~VaDG~GG~~~g~~AS~~~~~~l~~~~~~~--~~-------~~~~~~~an~~l~~~~~~~~~~~~~GtT~~~~~i 79 (211)
T 3rnr_A 9 DKAYCVVVDGMGGMIRGDEAAQRALSASVGVLDAG--GS-------PLDAVLAAQAAVHRWASQGGILGRTGATMAVAAV 79 (211)
T ss_dssp TEEEEEEEEECTTSTTHHHHHHHHHHHHHHHHHTT--CC-------HHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEEE
T ss_pred CccEEEEEeCCcCcHHHHHHHHHHHHHHHHHHhcc--CC-------HHHHHHHHHHHHHHHHhhccCCCCcchhheeeee
Confidence 55899999999999999999999999887642211 11 246777777777765432 23369999999999
Q ss_pred e--CCeEEEeeeCCceEEEEeeccCCCCCCCcccccceeEEEeCCCCCCCChhHHHHHHhcCCEEeeCCeecCcccCccc
Q 019889 167 L--GRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRA 244 (334)
Q Consensus 167 ~--~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~~~~~~~LT~DH~~~~~~E~~ri~~~g~~v~~~~r~~g~~~~tRa 244 (334)
. +++++++|+||||+|++|++ ++.+||.||++.. ++...|. .. ..++.++.+||+
T Consensus 80 ~~~~~~~~~anvGDSr~yl~r~g---------------~~~~lt~dh~~~~-----~~~~~g~--~~-~~~~~~~~ltra 136 (211)
T 3rnr_A 80 NLRDGTLEWASVGDCRVYLFKGG---------------RLSRLSLDHNVSS-----EMVLLGR--GP-VPGPAGEMITSF 136 (211)
T ss_dssp ETTTTEEEEEEESSCEEEEEETT---------------EEEECCCCCBHHH-----HHHHTTS--CC-CCSHHHHCBSCC
T ss_pred eeCCCEEEEEEEccCeEEEEeCC---------------EEEEECCCcHHHH-----HHHHcCC--Ch-hhCCCccEEecc
Confidence 9 89999999999999999998 9999999999743 3445555 22 567778899999
Q ss_pred ccCccccCCCceeccee--EEEEecCCCeEEEEecCCCccccChHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCC--C
Q 019889 245 FGDRQFKKFGVVATPDI--HSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKEGLSVTAVSRRLVREAVLERR--C 320 (334)
Q Consensus 245 lGd~~~k~~~v~~~P~i--~~~~l~~~d~~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~a~~l~~~A~~~~g--~ 320 (334)
||... ..+|++ ..+++.++| +||||||||||+++++++.+++.. ..+ |++|++.|. ++| +
T Consensus 137 lG~~~------~~~~~~~~~~~~l~~gd-~llL~SDGl~d~~~~~~i~~~l~~----~~~----a~~L~~~a~-~~g~~~ 200 (211)
T 3rnr_A 137 IGIEN------LTEISTSEAPLPLEAGE-GVLVVSDGVYRSLHEDRIAMALSR----GSD----ARGILQEVE-AQGRPY 200 (211)
T ss_dssp BTCSS------CCCCEECSSCEECCTTC-EEEEEEC-----CCTTEEEEEECT----TSC----HHHHHHHHH-HSCTTS
T ss_pred cCCCC------CcceeEecceecCCCCC-EEEEEcCCCCCCcCHHHHHHHHhc----CCh----HHHHHHHHH-HcCCCC
Confidence 99876 668888 789999998 899999999999999999988865 222 899999996 688 9
Q ss_pred CCccEEEEEEe
Q 019889 321 KDNCTAIVIIF 331 (334)
Q Consensus 321 ~DNiTvivv~~ 331 (334)
.||+|||||++
T Consensus 201 ~DNiTvivv~L 211 (211)
T 3rnr_A 201 QDNATLALVIL 211 (211)
T ss_dssp CSSCEEEEEEC
T ss_pred CCceEEEEEeC
Confidence 99999999986
No 19
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=99.89 E-value=1.7e-22 Score=179.08 Aligned_cols=208 Identities=15% Similarity=0.100 Sum_probs=140.0
Q ss_pred cccceeeeeecccC-CCCCCCceEEEeccCCCCCCCCCceeEEEEEeCCCchHHHHHHHHHHHHHHHhcCCChhhhcHHH
Q 019889 52 DFVEIEADAAEDKG-SRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPRELLDVKA 130 (334)
Q Consensus 52 ~~~~~~~~~~s~~G-~R~~nED~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~l~~~l~~~~~~~~~~~~~~ 130 (334)
..+.+.+++++..- .+..+.|.+.+... ..+..+|+|+||+|+...|.+++..+...+.... ....+
T Consensus 4 ~~~~i~~~~~~~~~p~~~v~GD~y~~~~~-------~~~~~~~~vaDg~G~G~~aa~~s~~~~~~l~~~~--~~~~~--- 71 (242)
T 3t91_A 4 MSYRVSTGAAHAAKGGGLVSGDSYSMMEL-------GARKYAAAISDGMGNGARAHFESNETIKLLEKIL--ESGID--- 71 (242)
T ss_dssp CCCEEEEEEEEECTTSCSCCSCEEEEEEE-------TTTEEEEEEECC-----CCSEEECHHHHHHHHHH--HHTCC---
T ss_pred ceEEEEEEeehhcCCccccCCcEEEEEEe-------CCCeEEEEEEeeCCCCHHHHHHHHHHHHHHHHHH--HhCCC---
Confidence 34677888877655 67889999987532 1234679999999988887777666665553310 01111
Q ss_pred HHHHHHHHHHhhhHHHHHhhhcCCCCCCCcEEEEEEe--CCeEEEeeeCCceEEEEeeccCCCCCCCcccccceeEEEeC
Q 019889 131 AKKAILDGFRKTDESLLQESVSGGWQDGATAVCIWIL--GRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVT 208 (334)
Q Consensus 131 ~~~~l~~a~~~~~~~l~~~~~~~~~~~GtT~~~~~i~--~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~~~~~~~LT 208 (334)
+.+++..+|+.+.... ...+++|+++++++ .++++++|+||||+|++|++ ++.+|+
T Consensus 72 ----~~~~l~~~n~~l~~~~---~~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g---------------~~~~l~ 129 (242)
T 3t91_A 72 ----EKIAIKTINSILSLRT---TDEIYSTLDLSIIDLQDASCKFLKVGSTPSFIKRGD---------------QVMKVQ 129 (242)
T ss_dssp ----HHHHHHHHHHHHTTC-------CCCCEEEEEEETTTCEEEEEEESCCCEEEEETT---------------EEEECC
T ss_pred ----HHHHHHHHHHHHHhcC---CCCeEeEEEEEEEECCCCEEEEEcCCCCceEEEECC---------------EEEEec
Confidence 2344556666664332 12578999999997 67999999999999999988 888886
Q ss_pred CCCCCCChhHHHHHHhcCCEEeeCCeecCcccCcccccCccccCCCceecceeEEEEecCCCeEEEEecCCCccccC---
Q 019889 209 RVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFG--- 285 (334)
Q Consensus 209 ~DH~~~~~~E~~ri~~~g~~v~~~~r~~g~~~~tRalGd~~~k~~~v~~~P~i~~~~l~~~d~~llL~SDGl~d~l~--- 285 (334)
.++.+ +|-.. ...++...+++.++| .|+||||||||.++
T Consensus 130 ~~~~~-------------------------------lG~~~------~~~~~~~~~~l~~GD-~lll~SDGl~e~~~~~~ 171 (242)
T 3t91_A 130 ASNLP-------------------------------IGIIN------EFDVEVVSEQLKAGD-LLIMMSDGIFEGPKHVE 171 (242)
T ss_dssp CC------------------------------------CCC------TTCEEEEEEECCTTC-EEEEECHHHHTCSTTCS
T ss_pred CCCce-------------------------------eEecC------CCcceEEEEEeCCCC-EEEEECCCcccCCCccc
Confidence 54432 33222 334567788899998 99999999999998
Q ss_pred --hHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCC--CCccEEEEEEecC
Q 019889 286 --PSDAVEFVQKLLKEGLSVTAVSRRLVREAVLERRC--KDNCTAIVIIFRH 333 (334)
Q Consensus 286 --~~ei~~~~~~~~~~~~~~~~~a~~l~~~A~~~~g~--~DNiTvivv~~~~ 333 (334)
...+.+++... ...+++++++.|++.+....+. .||+|++++++.+
T Consensus 172 ~~~~~~~~ll~~~--~~~~~~~~~~~l~~~~~~~~~~~~~DDiTvv~i~~~~ 221 (242)
T 3t91_A 172 NHDLWMKRKMKGL--KTNDPQEIADLLMEEVIRTRSGQIEDDMTVVVVRIDH 221 (242)
T ss_dssp CHHHHHHHHHHTC--CCCCHHHHHHHHHHHHHHHTTSCCCSCEEEEEEEEEE
T ss_pred chHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHHcCCCCCCceEEEEEEEec
Confidence 45555555431 2468999999999999644434 6999999999864
No 20
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=99.87 E-value=9.9e-21 Score=167.75 Aligned_cols=206 Identities=17% Similarity=0.137 Sum_probs=148.5
Q ss_pred ccceeeeeecccC-CCCCCCceEEEeccCCCCCCCCCceeEEEEEeCCCchHHHHHHHHHHHHHHHhcCCChhhhcHHHH
Q 019889 53 FVEIEADAAEDKG-SRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPRELLDVKAA 131 (334)
Q Consensus 53 ~~~~~~~~~s~~G-~R~~nED~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~l~~~l~~~~~~~~~~~~~~~ 131 (334)
.+.+.++.++... .+..+.|.+.+... ..+..+|+|+||+|+...|.+++..+...+..... ...+
T Consensus 8 ~~~~~~~~~~~~~~~~~vgGD~y~~~~~-------~~~~~~~~vaD~~G~G~~aa~~s~~~~~~l~~~~~--~~~~---- 74 (242)
T 3pu9_A 8 PVTIELAVAKTHKFGTRESGDTVELVER-------PGGGFSAVLVDGQGSGAGAKRLSLLVAGAAVRLLN--EGVR---- 74 (242)
T ss_dssp CEEEEEEEEEECCTTCSSCSEEEEEEEC-------TTSEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHH--TTCC----
T ss_pred CcEEEEEEEecccCccccCCceEEEEEe-------CCCEEEEEEEecCCCCHHHHHHHHHHHHHHHHHHH--cCCC----
Confidence 4556677766555 56778999887532 12346699999999999999998877665543210 1111
Q ss_pred HHHHHHHHHhhhHHHHHhhhcCCCCCCCcEEEEEEe--CCeEEEeeeCCceEEEEeeccCCCCCCCcccccceeEEEeCC
Q 019889 132 KKAILDGFRKTDESLLQESVSGGWQDGATAVCIWIL--GRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTR 209 (334)
Q Consensus 132 ~~~l~~a~~~~~~~l~~~~~~~~~~~GtT~~~~~i~--~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~~~~~~~LT~ 209 (334)
+.+++..+|+.+..... ..+.+|+++++++ .++++++|+||+++|++|++ ++.+|+.
T Consensus 75 ---~~~~l~~~n~~l~~~~~---~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g---------------~~~~l~~ 133 (242)
T 3pu9_A 75 ---DGAAARAAHDFLYAMRD---GKVSAALDILSVDLASRSVLVTRNSEVPMLLGRNG---------------EFEQISE 133 (242)
T ss_dssp ---HHHHHHHHHHHHHHHTT---TCCCEEEEEEEEETTTTEEEEEEESCCCEEEEETT---------------EEEEECC
T ss_pred ---HHHHHHHHHHHHHhccC---CCcEEEEEEEEEECCCCEEEEEeCCCCcEEEEECC---------------EEEEeCC
Confidence 23556677777755432 2468999999997 56899999999999999988 8999988
Q ss_pred CCCCCChhHHHHHHhcCCEEeeCCeecCcccCcccccCccccCCCceecceeEEEEecCCCeEEEEecCCCccccC----
Q 019889 210 VHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFG---- 285 (334)
Q Consensus 210 DH~~~~~~E~~ri~~~g~~v~~~~r~~g~~~~tRalGd~~~k~~~v~~~P~i~~~~l~~~d~~llL~SDGl~d~l~---- 285 (334)
++.+ +|-.. ..+++...+++.++| .|+||||||+|..+
T Consensus 134 ~~~~-------------------------------lG~~~------~~~~~~~~~~l~~Gd-~lll~TDGl~e~~~~~~~ 175 (242)
T 3pu9_A 134 SGGR-------------------------------IGIYR------HTRPRVLEFPAEPGL-TVILVSDGIIGAGGRRGQ 175 (242)
T ss_dssp CCCC-------------------------------BSSCT------TCCCEEEEEECCTTC-EEEEECHHHHTTTTTTTC
T ss_pred CCcc-------------------------------ccccC------CCCceEEEEEeCCCC-EEEEECcCcccCCCCccc
Confidence 7643 44332 345677888999998 99999999998765
Q ss_pred ---hHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCC--CCCccEEEEEEecC
Q 019889 286 ---PSDAVEFVQKLLKEGLSVTAVSRRLVREAVLERR--CKDNCTAIVIIFRH 333 (334)
Q Consensus 286 ---~~ei~~~~~~~~~~~~~~~~~a~~l~~~A~~~~g--~~DNiTvivv~~~~ 333 (334)
.+++..++. ....+++++++.|++.+....+ ..||+|++++++.+
T Consensus 176 ~~g~~~l~~l~~---~~~~~~~~~~~~l~~~~~~~~~~~~~DDiTvlvv~~~~ 225 (242)
T 3pu9_A 176 PLEFLATGGRVA---GPETPAQAIADELLEAALVADDGRAGDDMTVVVLRLRN 225 (242)
T ss_dssp CCCHHHHHHHHC---CTTCCHHHHHHHHHHHHHHHTTTSCSSCEEEEEEEEEE
T ss_pred cccHHHHHHHHh---ccCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEEEEec
Confidence 366643322 1246899999999999864222 57999999999864
No 21
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica}
Probab=99.77 E-value=2.9e-17 Score=140.35 Aligned_cols=188 Identities=18% Similarity=0.118 Sum_probs=134.1
Q ss_pred ceeeeeecccC-CCCCCCceEEEeccCCCCCCCCCceeEEEEEeCCCchHHHHHHHHHHHHHHHhcCCChhhhcHHHHHH
Q 019889 55 EIEADAAEDKG-SRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPRELLDVKAAKK 133 (334)
Q Consensus 55 ~~~~~~~s~~G-~R~~nED~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~l~~~l~~~~~~~~~~~~~~~~~ 133 (334)
.++++.++... .+..+.|.+.+... .+..+++|+||+|....|..++..+...+... ...++
T Consensus 3 ~~~~~~~~~p~~~~~v~GD~y~~~~~--------~~~~~~~v~Dv~GhG~~Aa~~s~~~~~~l~~~----~~~~p----- 65 (193)
T 3zt9_A 3 KLEVGIYTRAREGEIACGDACLVKRV--------EGVIFLAVGDGIGHGPEAARAAEIAIASMESS----MNTGL----- 65 (193)
T ss_dssp CCCEEEEEECCTTCSSCSEEEEEEEE--------TTEEEEEEEEESSSHHHHHHHHHHHHHHHHHH----TTSCH-----
T ss_pred ccEEEEEEeccCCCCCCCCeEEEEEe--------CCEEEEEEEeCCCCCHHHHHHHHHHHHHHHHc----ccCCH-----
Confidence 34566666555 56678899987532 13478999999998777778887777766542 11122
Q ss_pred HHHHHHHhhhHHHHHhhhcCCCCCCCcEEEEEEe--CCeEEEeeeCCceEEEEeeccCCCCCCCcccccceeEEEeCCCC
Q 019889 134 AILDGFRKTDESLLQESVSGGWQDGATAVCIWIL--GRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVH 211 (334)
Q Consensus 134 ~l~~a~~~~~~~l~~~~~~~~~~~GtT~~~~~i~--~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~~~~~~~LT~DH 211 (334)
.+.+..+|+.+.. ..|+|++++.++ .+++.++|+|+++.|++|.+ ....+....
T Consensus 66 --~~il~~ln~~l~~-------~~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~---------------~~~~l~~~~ 121 (193)
T 3zt9_A 66 --VNIFQLCHRELRG-------TRGAVAALCRVDRRQGLWQAAIVGNIHVKILSAK---------------GIITPLATP 121 (193)
T ss_dssp --HHHHHHHHHHHTT-------SSCEEEEEEEEETTTTEEEEEEESSCEEEEEETT---------------EEECCCCBC
T ss_pred --HHHHHHHHHHHhc-------cCceEEEEEEEECCCCEEEEEecCCceEEEEcCC---------------cEEEecCCC
Confidence 2334555665532 247888888887 56899999999999999987 555443211
Q ss_pred CCCChhHHHHHHhcCCEEeeCCeecCcccCcccccCccccCCCceecceeEEEEecCCCeEEEEecCCCccccChHHHHH
Q 019889 212 KAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVE 291 (334)
Q Consensus 212 ~~~~~~E~~ri~~~g~~v~~~~r~~g~~~~tRalGd~~~k~~~v~~~P~i~~~~l~~~d~~llL~SDGl~d~l~~~ei~~ 291 (334)
+ .+|... ..+++...+++.++| .|+|+||||+|.+..+++..
T Consensus 122 -------------------------g------~lG~~~------~~~~~~~~~~l~~gd-~l~l~sDGl~e~~~~~~~~~ 163 (193)
T 3zt9_A 122 -------------------------G------ILGYNY------PHQLLIAKGSYQEGD-LFLIHSDGIQEGAVPLALLA 163 (193)
T ss_dssp -------------------------C------BBTTBC------CSSCCCEEEECCTTC-EEEEECTTSCTTCSCGGGGG
T ss_pred -------------------------C------ceeccC------CccceeEEeccCCCC-EEEEECCCCCCccChhhhhc
Confidence 1 134221 124566788899998 99999999999999998876
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHhCCCCCccEEEEEE
Q 019889 292 FVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVII 330 (334)
Q Consensus 292 ~~~~~~~~~~~~~~~a~~l~~~A~~~~g~~DNiTvivv~ 330 (334)
++ ..+++++|+.|++.+ .+..||+|++|++
T Consensus 164 ~~------~~~~~~~a~~l~~~~---~~~~Dd~tvlv~r 193 (193)
T 3zt9_A 164 NY------RLTAEELVRLIGEKY---GRRDDDVAVIVAR 193 (193)
T ss_dssp CT------TSCHHHHHHHHHHHH---CCTTSCEEEEEEC
T ss_pred hh------cCCHHHHHHHHHHHh---CcCCCCeEEEEEC
Confidence 54 348999999999987 3579999999985
No 22
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A
Probab=99.75 E-value=1.6e-17 Score=148.13 Aligned_cols=203 Identities=14% Similarity=0.007 Sum_probs=126.6
Q ss_pred eeeeeecccCCCCCCCceEEEeccCCCCCCCCCceeEEEEEeCCCchHHHHHHHHHHHHHHHh---cCCChhhhcHHHHH
Q 019889 56 IEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVIS---AGLPRELLDVKAAK 132 (334)
Q Consensus 56 ~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~l~~~l~~---~~~~~~~~~~~~~~ 132 (334)
+.+++..... +...-|.+-+... ..+..+|+|+||+|+...|.+++..+...+.. ....... ...
T Consensus 38 ~~~~~~~~p~-~~vgGD~yd~~~~-------~~~~~~~~vaD~~GhG~~aa~~s~~~~~~~~~~~~~~~~~~~----~~~ 105 (255)
T 3f79_A 38 LEFSHRIIPS-LYLSGDFVDYFRV-------DERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRNGT----LPE 105 (255)
T ss_dssp EEEEEEEECS-SSSCSEEEEEEEE-------TTTEEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHHTTCCC-------
T ss_pred EEEEEEEeEh-hhcCceEEeEEEe-------CCCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHhhccccc----ccc
Confidence 3444443333 4567788744321 12347899999999777777776665544422 1000000 011
Q ss_pred HHHHHHHHhhhHHHHHhhhcCCCCCCCcEEEEEEe--CCeEEEeeeCC-ceEEEEeeccCCCCCCCcccccceeEEEeCC
Q 019889 133 KAILDGFRKTDESLLQESVSGGWQDGATAVCIWIL--GRTVFVANIGD-AKAVVARSSIVDGSNNHLDELSSLKAIVVTR 209 (334)
Q Consensus 133 ~~l~~a~~~~~~~l~~~~~~~~~~~GtT~~~~~i~--~~~l~vanvGD-SR~~l~r~~~~~~~~~~~~~~~~~~~~~LT~ 209 (334)
..+...+..+|+.+... ...+++|+++++++ .++++++|+|+ ++.|+++++ ++.+++.
T Consensus 106 ~~p~~~l~~ln~~l~~~----~~~~~~T~~~~~id~~~~~l~~~~aGh~p~~~l~~~g---------------~~~~l~~ 166 (255)
T 3f79_A 106 FKPSEVLAHINRGLINT----KLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEG---------------QAGYLEG 166 (255)
T ss_dssp -CHHHHHHHHHHHHBTT----BSSCCEEEEEEEEETTTTEEEEEECSCSCCCEEEC-----------------CEEECCC
T ss_pred CCHHHHHHHHHHHHHhc----CCCCEEEEEEEEEECCCCEEEEEeCCCCCceEEEeCC---------------eEEEeCC
Confidence 23455667777777542 23589999999996 56899999999 568999987 8888887
Q ss_pred CCCCCChhHHHHHHhcCCEEeeCCeecCcccCcccccCccccCCCceecceeEEEEecCCCeEEEEecCCCccccChHH-
Q 019889 210 VHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSD- 288 (334)
Q Consensus 210 DH~~~~~~E~~ri~~~g~~v~~~~r~~g~~~~tRalGd~~~k~~~v~~~P~i~~~~l~~~d~~llL~SDGl~d~l~~~e- 288 (334)
+|.+ +|-.. ...++...+++.++| .|+||||||+|.++.++
T Consensus 167 ~~~~-------------------------------lG~~~------~~~~~~~~~~l~~gd-~lll~TDGl~e~~~~~~~ 208 (255)
T 3f79_A 167 RGLP-------------------------------VGLFD------DATYDDRVMELPPSF-SLSLFSDGILDVLPGATL 208 (255)
T ss_dssp ------------------------------------CCSS------CCCCCC---BCCSSE-EEEEECSCCCCCSCC---
T ss_pred CCce-------------------------------EEEcC------CCceEEEEEEECCCC-EEEEECCCcCcccCCCcc
Confidence 6643 34322 234556778888888 99999999999998877
Q ss_pred ------HHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCCccEEEEEEec
Q 019889 289 ------AVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTAIVIIFR 332 (334)
Q Consensus 289 ------i~~~~~~~~~~~~~~~~~a~~l~~~A~~~~g~~DNiTvivv~~~ 332 (334)
+.+++... ..+++.+++.|+ .+ ...+..||||+++++..
T Consensus 209 ~~g~~~l~~~l~~~---~~~~~~~~~~l~-~~-~~~~~~DDiTvl~v~~~ 253 (255)
T 3f79_A 209 KEKEASLPEQVAAA---GGTLDGLRQVFG-LA-NLAEMPDDIALLVLSRN 253 (255)
T ss_dssp CCTTTSSHHHHHHH---SCSSHHHHHHC-------CCSSSCEEEEEEEEC
T ss_pred hhhHHHHHHHHHhc---CCCHHHHHHHHH-hc-cCCCCCCCEEEEEEEec
Confidence 77877653 346788888887 44 35788999999999875
No 23
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=99.24 E-value=8.5e-10 Score=104.35 Aligned_cols=191 Identities=14% Similarity=0.085 Sum_probs=112.6
Q ss_pred CCCCceEEEeccCCCCCCCCCceeEEEEEeCCC-chHHHHHHHHHHHHHHHhcCCChhhhcHHHHHHHHHHHHHhhhHHH
Q 019889 68 HTMEDASVVLVDASSDSPPNLRCAHFAIFDGHG-GRLAAEYAQKRLHANVISAGLPRELLDVKAAKKAILDGFRKTDESL 146 (334)
Q Consensus 68 ~~nED~~~~~~~~~~~~~~~~~~~l~~V~DGhG-G~~~~~~as~~l~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~l 146 (334)
..-=|.+-+..- . +..+++|+|++| |-.++ +++..+...+... . ....++. +.+..+|. +
T Consensus 50 ~vgGD~y~~~~~-------~-~~~~~~v~Dv~GhGv~AA-~~~~~~~~~l~~~-~-~~~~~p~-------~il~~ln~-~ 110 (399)
T 3ke6_A 50 AAGGDWFDALAL-------G-DRLVLVVGDVVGHGVEAA-AVMSQLRTALRMQ-I-SAGYTVV-------EALEAVDR-F 110 (399)
T ss_dssp SCCSEEEEEEEC-------S-SEEEEEEEECSSCSHHHH-HHHHHHHHHHHHH-H-HTTCCHH-------HHHHHHHH-H
T ss_pred CCCCceEEEEEE-------C-CEEEEEEEEecCCCHHHH-HHHHHHHHHHHHH-H-hcCCCHH-------HHHHHHHH-H
Confidence 344577766431 1 257899999999 44444 3333333333221 0 0111222 23344444 2
Q ss_pred HHhhhcCCCCCCCcEEEEEEe--CCeEEEeeeCCceEEEEeeccCCCCCCCcccccceeEEEeCCCCCCCChhHHHHHHh
Q 019889 147 LQESVSGGWQDGATAVCIWIL--GRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQK 224 (334)
Q Consensus 147 ~~~~~~~~~~~GtT~~~~~i~--~~~l~vanvGDSR~~l~r~~~~~~~~~~~~~~~~~~~~~LT~DH~~~~~~E~~ri~~ 224 (334)
... ....+++|++++.++ .+++.++++|..+.|+++.++ .+..+..++.+
T Consensus 111 ~~~---~~~~~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~g--------------~~~~l~~~~~~----------- 162 (399)
T 3ke6_A 111 HKQ---VPGSKSATMCVGSLDFTSGEFQYCTAGHPPPLLVTADA--------------SARYVEPTGAG----------- 162 (399)
T ss_dssp GGG---STTCTTCEEEEEEEETTTCEEEEEEESSCCCEEECTTS--------------CEEECCCCSCC-----------
T ss_pred HHh---cCCCcEEEEEEEEEECCCCEEEEECCCCChhEEEeCCC--------------CEEEeecCCCc-----------
Confidence 211 123478999988886 568999999999999998431 56666554421
Q ss_pred cCCEEeeCCeecCcccCcccccCccccCCCceecceeEEEEecCCCeEEEEecCCCccccCh------HHHHHHHHHHHH
Q 019889 225 SGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGP------SDAVEFVQKLLK 298 (334)
Q Consensus 225 ~g~~v~~~~r~~g~~~~tRalGd~~~k~~~v~~~P~i~~~~l~~~d~~llL~SDGl~d~l~~------~ei~~~~~~~~~ 298 (334)
.+|-. ...+...+.+.++| .|+|+||||.|.... +.+.+++.....
T Consensus 163 -------------------plG~~--------~~~~~~~~~l~~Gd-~l~l~TDGl~e~~~~~~~~g~~~l~~~l~~~~~ 214 (399)
T 3ke6_A 163 -------------------PLGSG--------TGFPVRSEVLNIGD-AILFYTDGLIERPGRPLEASTAEFADLAASIAS 214 (399)
T ss_dssp -------------------CTTSS--------CCCCCEEEECCTTC-EEEEECTTTTSCTTCCHHHHHHHHHHHHHHHTC
T ss_pred -------------------ceECC--------CCceeEEEEECCCC-EEEEECCCcccCCCCCcchhHHHHHHHHHHhhc
Confidence 13321 12345678898998 999999999998765 445555544211
Q ss_pred c---------CCCHHHHHHHHHHHHHHhCCCCCccEEEEEEecC
Q 019889 299 E---------GLSVTAVSRRLVREAVLERRCKDNCTAIVIIFRH 333 (334)
Q Consensus 299 ~---------~~~~~~~a~~l~~~A~~~~g~~DNiTvivv~~~~ 333 (334)
. ...++.+++.+++......+..||+|++++++..
T Consensus 215 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~DDitvl~vr~~~ 258 (399)
T 3ke6_A 215 GSGGFVLDAPARPIDRLCSDTLELLLRSTGYNDDVTLLAMQRRA 258 (399)
T ss_dssp ----------CCHHHHHHHHHHHHHHHTTCCSSCEEEEEEEECC
T ss_pred ccccccccChhhHHHHHHHHHHHHhccCCCCCCceEEEEEEeeC
Confidence 1 1223445555555433224678999999999863
No 24
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=98.54 E-value=1.8e-06 Score=80.98 Aligned_cols=175 Identities=15% Similarity=0.066 Sum_probs=92.1
Q ss_pred ceeEEEEEeCCC-chHHHHHHH--HHHHHHHHhcCCC---hhhhcHHHHHHHHHHHHHhhhHHHHHhhhcCCCCCCCcEE
Q 019889 89 RCAHFAIFDGHG-GRLAAEYAQ--KRLHANVISAGLP---RELLDVKAAKKAILDGFRKTDESLLQESVSGGWQDGATAV 162 (334)
Q Consensus 89 ~~~l~~V~DGhG-G~~~~~~as--~~l~~~l~~~~~~---~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~GtT~~ 162 (334)
+..+++|+|+.| |-.++-.++ ..+...+...... ....++. ..+..+|..+... ...+..|++
T Consensus 202 ~~~~~~i~Dv~GhGv~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-------~~l~~ln~~l~~~----~~~~~~t~~ 270 (394)
T 3eq2_A 202 RRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRNGTLPEFKPS-------EVLAHINRGLINT----KLGKHVTML 270 (394)
T ss_dssp TEEEEEEEEESSCSTTTHHHHHHHHHHHHHHHHHSCSSCSSSSCCHH-------HHHHHHHHHHHHT----TCCCCEEEE
T ss_pred CcEEEEEEECCCCChHHHHHHHHHHHHHHHHHHhhhccCCcccCCHH-------HHHHHHHHHHhcc----CcCcEEEEE
Confidence 446789999887 555443322 2223333222110 0112222 3345556666532 124578888
Q ss_pred EEEEe--CCeEEEeeeCCce-EEEEeeccCCCCCCCcccccceeEEEeCCCCCCCChhHHHHHHhcCCEEeeCCeecCcc
Q 019889 163 CIWIL--GRTVFVANIGDAK-AVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRL 239 (334)
Q Consensus 163 ~~~i~--~~~l~vanvGDSR-~~l~r~~~~~~~~~~~~~~~~~~~~~LT~DH~~~~~~E~~ri~~~g~~v~~~~r~~g~~ 239 (334)
++.++ .+++.+++.|-.. .++.+++ .+..|.....
T Consensus 271 ~~~~d~~~~~l~~~~aGh~p~~~~~~~g---------------~~~~l~~~~~--------------------------- 308 (394)
T 3eq2_A 271 GGVIDLEKNSLTYSIGGHLPLPVLFVEG---------------QAGYLEGRGL--------------------------- 308 (394)
T ss_dssp EEEEETTTTEEEEEECSSSCCCEEEETT---------------EEEECCCC-----------------------------
T ss_pred EEEEECCCCEEEEEcCCCCCCcEEecCC---------------ceEecCCCCc---------------------------
Confidence 88887 4589999999855 5666665 6666643221
Q ss_pred cCcccccCccccCCCceecceeEEEEecCCCeEEEEecCCCccccCh-------HHHHHHHHHHHHcCCCHHHHHHHHHH
Q 019889 240 EVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGP-------SDAVEFVQKLLKEGLSVTAVSRRLVR 312 (334)
Q Consensus 240 ~~tRalGd~~~k~~~v~~~P~i~~~~l~~~d~~llL~SDGl~d~l~~-------~ei~~~~~~~~~~~~~~~~~a~~l~~ 312 (334)
.+|-.. ........+++.++| .|+|.||||.|.... +.+.+++.. ....++.+++.+..
T Consensus 309 ----plG~~~------~~~~~~~~~~l~~gd-~l~l~TDG~~e~~~~~~~~~~~~~l~~~l~~---~~~~~~~l~~~~~~ 374 (394)
T 3eq2_A 309 ----PVGLFD------DATYDDRVMELPPSF-SLSLFSDGILDVLPGATLKEKEASLPEQVAA---AGGTLDGLRQVFGL 374 (394)
T ss_dssp ----CCSCCC------CC--CCEEEECCSSC-EEEECSSCCCC-----CCSTTTTTSHHHHHT---TC--CHHHHHHHSC
T ss_pred ----eeEecC------CCceEEEEEEeCCCC-EEEEECCCcccccCcccchhhHHHHHHHHHh---cchhHHHHHHHhcc
Confidence 133221 222345678888998 999999999997443 344555543 12223333333221
Q ss_pred HHHHhCCCCCccEEEEEEec
Q 019889 313 EAVLERRCKDNCTAIVIIFR 332 (334)
Q Consensus 313 ~A~~~~g~~DNiTvivv~~~ 332 (334)
. ......||+|+++++..
T Consensus 375 ~--~~~~~~DDit~l~i~~~ 392 (394)
T 3eq2_A 375 A--NLAEMPDDIALLVLSRN 392 (394)
T ss_dssp C--CSCC--CCCEEEEEC--
T ss_pred c--CCCCCCCceEEEEEecc
Confidence 0 01234799999999865
No 25
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=52.86 E-value=0.44 Score=46.27 Aligned_cols=78 Identities=6% Similarity=-0.027 Sum_probs=56.6
Q ss_pred cCcccccCccccCCCceecceeEEEEecC--CC---eEEEEecCCCccccChHHHHHHHHHHHH-cCCCHHHHHHHHHHH
Q 019889 240 EVSRAFGDRQFKKFGVVATPDIHSFEVTE--RD---HFIILGCDGLWGVFGPSDAVEFVQKLLK-EGLSVTAVSRRLVRE 313 (334)
Q Consensus 240 ~~tRalGd~~~k~~~v~~~P~i~~~~l~~--~d---~~llL~SDGl~d~l~~~ei~~~~~~~~~-~~~~~~~~a~~l~~~ 313 (334)
.++||+|-.. ..+.++..+.+.+ ++ ..+++++ |+++...++.+++..... ...+.+..|+.|++.
T Consensus 43 ~l~~~~~l~~------~~~~d~~~~~~~~~ig~~~~~~f~~t~---~~~~~~~~~~~~i~e~~~~~~~~~~~~~~~l~~~ 113 (543)
T 3c4z_A 43 PLSKCEALRE------SLDLGFEGMCLEQPIGKRLFQQFLRTH---EQHGPALQLWKDIEDYDTADDALRPQKAQALRAA 113 (543)
T ss_dssp CGGGGHHHHH------HSCCCHHHHHTSSHHHHHHHHHHHHHC---GGGHHHHHHHHHHHHHHTSCTTTHHHHHHHHHHH
T ss_pred CchHHHHHHh------ccccCHHHhhccCcccHHHHHHHHhcC---CchhHHHHHHhhhhhhccCchhhHHHHHHHHHHH
Confidence 3899999665 4556666666655 54 0234455 899999888888877542 234678899999999
Q ss_pred HHHhCCCCCccEEE
Q 019889 314 AVLERRCKDNCTAI 327 (334)
Q Consensus 314 A~~~~g~~DNiTvi 327 (334)
|+ ..++.||++++
T Consensus 114 ~~-~~~~~d~~~~~ 126 (543)
T 3c4z_A 114 YL-EPQAQLFCSFL 126 (543)
T ss_dssp HT-STTCTTCCTTS
T ss_pred hh-CchhhhhhccC
Confidence 97 79999999876
No 26
>2krx_A ASL3597 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, unknown function; NMR {Nostoc SP}
Probab=43.88 E-value=57 Score=23.32 Aligned_cols=48 Identities=17% Similarity=0.243 Sum_probs=37.9
Q ss_pred CCCeEEEEecCCCccccChHHHHHHHHHHHHcC------------CCHHHHHHHHHHHHH
Q 019889 268 ERDHFIILGCDGLWGVFGPSDAVEFVQKLLKEG------------LSVTAVSRRLVREAV 315 (334)
Q Consensus 268 ~~d~~llL~SDGl~d~l~~~ei~~~~~~~~~~~------------~~~~~~a~~l~~~A~ 315 (334)
..|.|+||-.+-==..+|.+|+..-+..++... .+.++.|+.|++.+.
T Consensus 8 q~D~yVvLEp~~~EqfLT~~Ell~~Lk~~L~~~~~~~LP~dL~~~~s~~~qaq~Lldt~C 67 (94)
T 2krx_A 8 QQDNFVVLETNQPEQFLTTIELLEKLKGELEKISFSDLPLELQKLDSLPAQAQHLIDTSC 67 (94)
T ss_dssp CCCCEEEEESSSCSEEECHHHHHHHHHHHHHHSCTTTSCHHHHHCCCHHHHHHHHHHHCC
T ss_pred ccCCEEEecCCCCcccCCHHHHHHHHHHHHHhCccccCCHHHHhCCCHHHHHHHHHHhee
Confidence 445588888876667899999999999988654 467888999998873
No 27
>3q4f_C DNA repair protein XRCC4; DSB repair, nuclear, recombination-recombination complex, DN protein-protein binding complex; HET: DNA; 5.50A {Homo sapiens}
Probab=25.45 E-value=1.6e+02 Score=23.78 Aligned_cols=69 Identities=20% Similarity=0.299 Sum_probs=44.5
Q ss_pred ceecceeEEEEe---cC--CCeEEEEecCCC--c-cccChHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCCccEE
Q 019889 255 VVATPDIHSFEV---TE--RDHFIILGCDGL--W-GVFGPSDAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTA 326 (334)
Q Consensus 255 v~~~P~i~~~~l---~~--~d~~llL~SDGl--~-d~l~~~ei~~~~~~~~~~~~~~~~~a~~l~~~A~~~~g~~DNiTv 326 (334)
+..+|++..+-. .+ ++.|.|+-|||- | ..++.++|...+... +...+.-.+.|.+.-+...++.+|.+.
T Consensus 39 ~~sep~~~yfLqvsW~~~lgsGF~i~LTDGqSaW~G~VS~~~Is~eAd~m---~Me~e~YV~eL~KALv~~~~~~~~y~F 115 (186)
T 3q4f_C 39 LVSEPSITHFLQVSWEKTLESGFVITLTDGHSAWTGTVSESEISQEADDM---AMEKGKYVGELRKALLSGAGPADVYTF 115 (186)
T ss_dssp ETTEEEEEEEEEEEESSCGGGEEEEEEECSSCEEEEEEEHHHHHHHHHHT---TCCHHHHHHHHHHHHSSCCCSSCCEEE
T ss_pred ecCCCCccEEEEEEeccCCCcceEEEEeCCcceeeeEECHHHHHHHHHHh---cCcHHHHHHHHHHHHhcCCCCCcceEE
Confidence 567787654332 23 356999999995 4 368999998887764 556677666655543233445556554
No 28
>3mud_A DNA repair protein XRCC4, tropomyosin alpha-1 CHA; tropomysoin, overlap complex, coiled-coils, contractIle PROT; HET: DNA; 2.20A {Homo sapiens} PDB: 3sr2_A*
Probab=23.18 E-value=2.1e+02 Score=22.95 Aligned_cols=70 Identities=20% Similarity=0.281 Sum_probs=46.0
Q ss_pred ceecceeEEEEe---cC--CCeEEEEecCCC--c-cccChHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCCccEE
Q 019889 255 VVATPDIHSFEV---TE--RDHFIILGCDGL--W-GVFGPSDAVEFVQKLLKEGLSVTAVSRRLVREAVLERRCKDNCTA 326 (334)
Q Consensus 255 v~~~P~i~~~~l---~~--~d~~llL~SDGl--~-d~l~~~ei~~~~~~~~~~~~~~~~~a~~l~~~A~~~~g~~DNiTv 326 (334)
+..+|.+..+-. .+ ++.|.|+-|||- | ..++.++|....... +...+.-.+.|.+.-+...++.+|.+.
T Consensus 13 ~~s~p~~~yfL~v~w~~~l~~gf~i~ltDG~saW~g~Vs~~~i~~eA~~~---~me~e~Yv~el~kAl~~~~~~~~~~~f 89 (175)
T 3mud_A 13 LVSEPSITHFLQVSWEKTLESGFVITLTDGHSAWTGTVSESEISQEADDM---AMEKGKYVGELRKALLSGAGPADVYTF 89 (175)
T ss_dssp ETTEEEEEEEEEEEESSCGGGEEEEEEECSSCEEEEEEEHHHHHHHHHHT---TCCHHHHHHHHHHHHTTCCCTTCCEEE
T ss_pred ecCCCCceEEEEEeccccCCcceEEEEeCCcceeeeeeCHHHHHHHHHHh---cCcHHHHHHHHHHHHhcCCCCCcceEE
Confidence 466787654332 22 356999999995 4 368999998887764 566777676765543233466677765
Q ss_pred E
Q 019889 327 I 327 (334)
Q Consensus 327 i 327 (334)
.
T Consensus 90 ~ 90 (175)
T 3mud_A 90 N 90 (175)
T ss_dssp E
T ss_pred e
Confidence 4
No 29
>1dhn_A DHNA, 7,8-dihydroneopterin aldolase; pterin binding, folate biosynthesis, antibiotic target, beta; 1.65A {Staphylococcus aureus} SCOP: d.96.1.3 PDB: 1rri_A* 1rrw_A* 1rry_A* 1rs2_A* 1rs4_A* 1rsd_A* 1rsi_A* 1u68_A* 2dhn_A* 2nm2_A* 2nm3_A*
Probab=21.77 E-value=2.2e+02 Score=20.88 Aligned_cols=41 Identities=10% Similarity=0.120 Sum_probs=33.8
Q ss_pred ecCCCccccChHHHHHHHHHHHHcC--CCHHHHHHHHHHHHHH
Q 019889 276 GCDGLWGVFGPSDAVEFVQKLLKEG--LSVTAVSRRLVREAVL 316 (334)
Q Consensus 276 ~SDGl~d~l~~~ei~~~~~~~~~~~--~~~~~~a~~l~~~A~~ 316 (334)
.||-|-+.++..++.+.+.+..... .-.+.+|+++.+..+.
T Consensus 44 ~sDdl~~tvdY~~v~~~i~~~v~~~~~~LiE~lA~~Ia~~~l~ 86 (121)
T 1dhn_A 44 RTDNVIDTVHYGEVFEEVKSIMEGKAVNLLEHLAERIANRINS 86 (121)
T ss_dssp HHCCGGGSCCHHHHHHHHHHHHTSSCCSCHHHHHHHHHHHHHH
T ss_pred ccCCccceeCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHH
Confidence 4789999999999999999977543 4578899998888764
Done!