BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019893
(334 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VDH1|FBX21_MOUSE F-box only protein 21 OS=Mus musculus GN=Fbxo21 PE=2 SV=1
Length = 627
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 502 CYSIGLVMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 559
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 560 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 604
>sp|Q5R5S1|FBX21_PONAB F-box only protein 21 OS=Pongo abelii GN=FBXO21 PE=2 SV=1
Length = 621
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 495 CYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 552
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 553 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 597
>sp|O94952|FBX21_HUMAN F-box only protein 21 OS=Homo sapiens GN=FBXO21 PE=2 SV=2
Length = 628
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 207 AFRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 502 CYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS-- 559
Query: 267 NILVAYVAEENLLASDQPDMARFDHPYISFLFYGTDTAGDFIPIKQLREKY 317
Y A+ENL + +P HP + ++ T +IP +L +Y
Sbjct: 560 ---CRYAAQENLEYNVEPQ--EISHPDVG-RYFSEFTGTHYIPNAELEIRY 604
>sp|Q6D6C5|HSPQ_ERWCT Heat shock protein HspQ OS=Erwinia carotovora subsp. atroseptica
(strain SCRI 1043 / ATCC BAA-672) GN=hspQ PE=3 SV=1
Length = 102
Score = 45.1 bits (105), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLV-DVHAD 265
F LGQ++ HK+ G+ VI +DP E+ +W EI+ + + S+P+Y V++ D
Sbjct: 6 FGLGQQIRHKLLGFPGVIIDIDPEYSLETPTWEEISGNDTPR---SEPWYHVVMEDNEGQ 62
Query: 266 PNILVAYVAEENLLASDQPDMARFDHPYISFL 297
P + Y+AE +L+ + +++ DHP ++ L
Sbjct: 63 P--MHTYLAEAHLM---KEELSEHDHPSLNEL 89
>sp|C6DKX0|HSPQ_PECCP Heat shock protein HspQ OS=Pectobacterium carotovorum subsp.
carotovorum (strain PC1) GN=hspQ PE=3 SV=1
Length = 102
Score = 41.2 bits (95), Expect = 0.011, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLV-DVHAD 265
F +GQ++ HK+ G+ V+ +DP E+ +W EI+ + + S+P+Y V++ D
Sbjct: 6 FGIGQQIRHKLLGFPGVVIDIDPEYSLETPTWEEISGNDTPR---SEPWYHVVMEDDEGQ 62
Query: 266 PNILVAYVAEENLLASDQPDMARFDHPYISFL 297
P + Y+AE L+ + +++ +HP ++ L
Sbjct: 63 P--IHTYLAEAQLM---KEELSEHEHPSLNEL 89
>sp|Q8D251|HSPQ_WIGBR Heat shock protein HspQ OS=Wigglesworthia glossinidia brevipalpis
GN=hspQ PE=3 SV=2
Length = 105
Score = 38.9 bits (89), Expect = 0.056, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V HK+ GY VI +DP E S EI+ + L++ P +Y V+ D P
Sbjct: 6 FGIGQQVRHKLLGYLGVIIDVDPEYSLEKPSLEEISADDSLRRSPW--YYVVMEDEDGKP 63
Query: 267 NILVAYVAEENL---LASDQPDMARFD 290
+ Y+AE L ++ P+ + D
Sbjct: 64 --VHTYLAEAQLGYEISPVHPEQPKLD 88
>sp|Q1LT59|HSPQ_BAUCH Heat shock protein HspQ OS=Baumannia cicadellinicola subsp.
Homalodisca coagulata GN=hspQ PE=3 SV=1
Length = 105
Score = 38.5 bits (88), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWME-IAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V HK+FGY VI +DP +++ IA + L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHKLFGYLGVIIDVDPEYSLDKPYIDKIAADDSLR---TAPWYHVVME-DEDG 61
Query: 267 NILVAYVAEENL 278
+ Y+AE L
Sbjct: 62 KPVHTYLAEAQL 73
>sp|B2VDG6|HSPQ_ERWT9 Heat shock protein HspQ OS=Erwinia tasmaniensis (strain DSM 17950 /
Et1/99) GN=hspQ PE=3 SV=1
Length = 105
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F LGQ+V H+++G+ VI +DP + + ++ A + +G P+Y V+++ D
Sbjct: 6 FGLGQQVRHQLYGFLGVIVDVDPEYSLADTEIDDAATSETLRG--APWYHVVME-DDDGQ 62
Query: 268 ILVAYVAEENL---LASDQPDMARFD 290
+ Y+AE L + + P+ D
Sbjct: 63 TVQTYLAEAQLSWEIPGEHPEQPSLD 88
>sp|Q2NU66|HSPQ_SODGM Heat shock protein HspQ OS=Sodalis glossinidius (strain morsitans)
GN=hspQ PE=3 SV=1
Length = 105
Score = 37.4 bits (85), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVD 261
F +GQ+V HK+ GY VI +DP E S +IA + L+ + P+Y V+++
Sbjct: 6 FGIGQQVRHKLLGYLGVIIDVDPEYSLEKPSLDDIAADDSLR---TAPWYHVVME 57
>sp|P47319|UVRB_MYCGE UvrABC system protein B OS=Mycoplasma genitalium (strain ATCC 33530
/ G-37 / NCTC 10195) GN=uvrB PE=3 SV=1
Length = 656
Score = 37.0 bits (84), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 145 LSSKSEAQDKALSIIRLRADLQKAIDSENYALAADLRDQICKLEAE 190
L +KS A+ A I +L +++KA ++NY LA ++RD I +LE E
Sbjct: 604 LKAKSNAEKNAALIKQLTKEMKKAAANQNYELAIEIRDSIFELEKE 649
>sp|Q492P5|HSPQ_BLOPB Heat shock protein HspQ OS=Blochmannia pennsylvanicus (strain BPEN)
GN=hspQ PE=3 SV=1
Length = 105
Score = 36.6 bits (83), Expect = 0.28, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 12/89 (13%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V HK+ GY VI +DP E + EI + + L++ P ++ V+ D P
Sbjct: 6 FGIGQQVRHKLLGYLGVIIDIDPEYSLEKPTLDEITKNDTLRKSPW--YHVVMEDEEGKP 63
Query: 267 NILVAYVAE-----ENLLASDQPDMARFD 290
+ Y+AE EN+L P+ D
Sbjct: 64 --MHTYLAEVQLGYENILT--HPEQTTLD 88
>sp|P75558|UVRB_MYCPN UvrABC system protein B OS=Mycoplasma pneumoniae (strain ATCC 29342
/ M129) GN=uvrB PE=3 SV=1
Length = 657
Score = 36.2 bits (82), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 145 LSSKSEAQDKALSIIRLRADLQKAIDSENYALAADLRDQICKLEAE 190
L +KS Q KA I +L ++++A ++NY LA ++RD I +LE +
Sbjct: 605 LKTKSSEQQKAALIKQLTKEMKQAAANQNYELAIEIRDSIFELEKQ 650
>sp|Q32HU0|HSPQ_SHIDS Heat shock protein HspQ OS=Shigella dysenteriae serotype 1 (strain
Sd197) GN=hspQ PE=3 SV=2
Length = 105
Score = 35.8 bits (81), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 12/89 (13%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENL---LASDQPDMARFD 290
N L Y+AE L L ++P+ D
Sbjct: 60 NGLPVHTYLAEAQLSSELQDERPEQPSMD 88
>sp|Q3Z3F4|HSPQ_SHISS Heat shock protein HspQ OS=Shigella sonnei (strain Ss046) GN=hspQ
PE=3 SV=2
Length = 105
Score = 35.8 bits (81), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENL---LASDQPDMARFD 290
N L Y+AE L L + P+ D
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMD 88
>sp|P0AB23|HSPQ_SHIFL Heat shock protein HspQ OS=Shigella flexneri GN=hspQ PE=3 SV=2
Length = 105
Score = 35.8 bits (81), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENL---LASDQPDMARFD 290
N L Y+AE L L + P+ D
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMD 88
>sp|Q0T668|HSPQ_SHIF8 Heat shock protein HspQ OS=Shigella flexneri serotype 5b (strain
8401) GN=hspQ PE=3 SV=2
Length = 105
Score = 35.8 bits (81), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENL---LASDQPDMARFD 290
N L Y+AE L L + P+ D
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMD 88
>sp|Q31YM9|HSPQ_SHIBS Heat shock protein HspQ OS=Shigella boydii serotype 4 (strain
Sb227) GN=hspQ PE=3 SV=2
Length = 105
Score = 35.8 bits (81), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENL---LASDQPDMARFD 290
N L Y+AE L L + P+ D
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMD 88
>sp|B2TTS8|HSPQ_SHIB3 Heat shock protein HspQ OS=Shigella boydii serotype 18 (strain CDC
3083-94 / BS512) GN=hspQ PE=3 SV=1
Length = 105
Score = 35.8 bits (81), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENL---LASDQPDMARFD 290
N L Y+AE L L + P+ D
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMD 88
>sp|Q1RDP6|HSPQ_ECOUT Heat shock protein HspQ OS=Escherichia coli (strain UTI89 / UPEC)
GN=hspQ PE=3 SV=2
Length = 105
Score = 35.8 bits (81), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENL---LASDQPDMARFD 290
N L Y+AE L L + P+ D
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMD 88
>sp|B1LJ31|HSPQ_ECOSM Heat shock protein HspQ OS=Escherichia coli (strain SMS-3-5 /
SECEC) GN=hspQ PE=3 SV=1
Length = 105
Score = 35.8 bits (81), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENL---LASDQPDMARFD 290
N L Y+AE L L + P+ D
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMD 88
>sp|B6I941|HSPQ_ECOSE Heat shock protein HspQ OS=Escherichia coli (strain SE11) GN=hspQ
PE=3 SV=1
Length = 105
Score = 35.8 bits (81), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENL---LASDQPDMARFD 290
N L Y+AE L L + P+ D
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMD 88
>sp|B7N3C9|HSPQ_ECOLU Heat shock protein HspQ OS=Escherichia coli O17:K52:H18 (strain
UMN026 / ExPEC) GN=hspQ PE=3 SV=1
Length = 105
Score = 35.8 bits (81), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENL---LASDQPDMARFD 290
N L Y+AE L L + P+ D
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMD 88
>sp|P0AB20|HSPQ_ECOLI Heat shock protein HspQ OS=Escherichia coli (strain K12) GN=hspQ
PE=1 SV=2
Length = 105
Score = 35.8 bits (81), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENL---LASDQPDMARFD 290
N L Y+AE L L + P+ D
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMD 88
>sp|B1IVW6|HSPQ_ECOLC Heat shock protein HspQ OS=Escherichia coli (strain ATCC 8739 / DSM
1576 / Crooks) GN=hspQ PE=3 SV=1
Length = 105
Score = 35.8 bits (81), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENL---LASDQPDMARFD 290
N L Y+AE L L + P+ D
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMD 88
>sp|P0AB21|HSPQ_ECOL6 Heat shock protein HspQ OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=hspQ PE=3 SV=2
Length = 105
Score = 35.8 bits (81), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENL---LASDQPDMARFD 290
N L Y+AE L L + P+ D
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMD 88
>sp|Q0TJ94|HSPQ_ECOL5 Heat shock protein HspQ OS=Escherichia coli O6:K15:H31 (strain 536
/ UPEC) GN=hspQ PE=3 SV=2
Length = 105
Score = 35.8 bits (81), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENL---LASDQPDMARFD 290
N L Y+AE L L + P+ D
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMD 88
>sp|A1A9N5|HSPQ_ECOK1 Heat shock protein HspQ OS=Escherichia coli O1:K1 / APEC GN=hspQ
PE=3 SV=2
Length = 105
Score = 35.8 bits (81), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENL---LASDQPDMARFD 290
N L Y+AE L L + P+ D
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMD 88
>sp|B1X8S0|HSPQ_ECODH Heat shock protein HspQ OS=Escherichia coli (strain K12 / DH10B)
GN=hspQ PE=3 SV=1
Length = 105
Score = 35.8 bits (81), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENL---LASDQPDMARFD 290
N L Y+AE L L + P+ D
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMD 88
>sp|C4ZQ92|HSPQ_ECOBW Heat shock protein HspQ OS=Escherichia coli (strain K12 / MC4100 /
BW2952) GN=hspQ PE=3 SV=1
Length = 105
Score = 35.8 bits (81), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENL---LASDQPDMARFD 290
N L Y+AE L L + P+ D
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMD 88
>sp|B7M895|HSPQ_ECO8A Heat shock protein HspQ OS=Escherichia coli O8 (strain IAI1)
GN=hspQ PE=3 SV=1
Length = 105
Score = 35.8 bits (81), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENL---LASDQPDMARFD 290
N L Y+AE L L + P+ D
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMD 88
>sp|B7MS77|HSPQ_ECO81 Heat shock protein HspQ OS=Escherichia coli O81 (strain ED1a)
GN=hspQ PE=3 SV=1
Length = 105
Score = 35.8 bits (81), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENL---LASDQPDMARFD 290
N L Y+AE L L + P+ D
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMD 88
>sp|B7NLF0|HSPQ_ECO7I Heat shock protein HspQ OS=Escherichia coli O7:K1 (strain IAI39 /
ExPEC) GN=hspQ PE=3 SV=1
Length = 105
Score = 35.8 bits (81), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENL---LASDQPDMARFD 290
N L Y+AE L L + P+ D
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMD 88
>sp|B5YT97|HSPQ_ECO5E Heat shock protein HspQ OS=Escherichia coli O157:H7 (strain EC4115
/ EHEC) GN=hspQ PE=3 SV=1
Length = 105
Score = 35.8 bits (81), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENL---LASDQPDMARFD 290
N L Y+AE L L + P+ D
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMD 88
>sp|P0AB22|HSPQ_ECO57 Heat shock protein HspQ OS=Escherichia coli O157:H7 GN=hspQ PE=3
SV=2
Length = 105
Score = 35.8 bits (81), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENL---LASDQPDMARFD 290
N L Y+AE L L + P+ D
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMD 88
>sp|B7LE66|HSPQ_ECO55 Heat shock protein HspQ OS=Escherichia coli (strain 55989 / EAEC)
GN=hspQ PE=3 SV=1
Length = 105
Score = 35.8 bits (81), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENL---LASDQPDMARFD 290
N L Y+AE L L + P+ D
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMD 88
>sp|B7MIC0|HSPQ_ECO45 Heat shock protein HspQ OS=Escherichia coli O45:K1 (strain S88 /
ExPEC) GN=hspQ PE=3 SV=1
Length = 105
Score = 35.8 bits (81), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENL---LASDQPDMARFD 290
N L Y+AE L L + P+ D
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMD 88
>sp|B7UN45|HSPQ_ECO27 Heat shock protein HspQ OS=Escherichia coli O127:H6 (strain
E2348/69 / EPEC) GN=hspQ PE=3 SV=1
Length = 105
Score = 35.8 bits (81), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 12/89 (13%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENL---LASDQPDMARFD 290
N L Y+AE L L + P+ D
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMD 88
>sp|Q7VR10|HSPQ_BLOFL Heat shock protein HspQ OS=Blochmannia floridanus GN=hspQ PE=3 SV=1
Length = 105
Score = 35.8 bits (81), Expect = 0.52, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F++GQ+V HK+ GY V+ +DP E + E+ + + L++ P ++ V+ D P
Sbjct: 6 FKIGQQVRHKLLGYLGVVIDIDPEYSLEKPTLDEVTKNDSLRKFPW--YHVVMEDDEGKP 63
Query: 267 NILVAYVAEENLLASD---QPDMARFD 290
+ Y+AE L D P+ + D
Sbjct: 64 --IHTYLAEIQLGYEDTVIHPEQSTLD 88
>sp|A1JMW1|HSPQ_YERE8 Heat shock protein HspQ OS=Yersinia enterocolitica serotype O:8 /
biotype 1B (strain 8081) GN=hspQ PE=3 SV=1
Length = 105
Score = 35.0 bits (79), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLV-DVHAD 265
F +GQ+V H++ GY V+ +DP E + E+A + L+ P+Y V++ D
Sbjct: 6 FGIGQQVRHRLHGYLGVVIDIDPEYSLEPPAPDEVANNDTLRLS---PWYHVVIEDDEGQ 62
Query: 266 PNILVAYVAEENLLASD 282
P + Y+AE L D
Sbjct: 63 P--VHTYLAEAQLTYED 77
>sp|Q57QS4|HSPQ_SALCH Heat shock protein HspQ OS=Salmonella choleraesuis (strain SC-B67)
GN=hspQ PE=3 SV=1
Length = 105
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DP + S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPEYSLDEPSPDELAVNDELR---AAPWYHVVME-DDDG 61
Query: 267 NILVAYVAEENLLASDQPDMARFDHP 292
+ Y+AE L + R +HP
Sbjct: 62 QPVRTYLAEAQLRSE-----MRDEHP 82
>sp|B7LNX6|HSPQ_ESCF3 Heat shock protein HspQ OS=Escherichia fergusonii (strain ATCC
35469 / DSM 13698 / CDC 0568-73) GN=hspQ PE=3 SV=1
Length = 105
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 12/89 (13%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPV-CCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLAEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENL---LASDQPDMARFD 290
N L Y+AE L + + P+ D
Sbjct: 60 NGLPIHTYLAEAQLSSEMREEHPEQPSMD 88
>sp|A6T765|HSPQ_KLEP7 Heat shock protein HspQ OS=Klebsiella pneumoniae subsp. pneumoniae
(strain ATCC 700721 / MGH 78578) GN=hspQ PE=3 SV=1
Length = 105
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY VI +DP EIA ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHTLLGYLGVIVDVDPEYSLAEPEEDEIAANDELR---AAPWYHVVME-DDDG 61
Query: 267 NILVAYVAEENLLASDQPDMARFDHP 292
+ Y+AE L + R +HP
Sbjct: 62 QPIHTYLAEAQLSSE-----TRDEHP 82
>sp|B5XY39|HSPQ_KLEP3 Heat shock protein HspQ OS=Klebsiella pneumoniae (strain 342)
GN=hspQ PE=3 SV=1
Length = 105
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY VI +DP EIA ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHTLLGYLGVIVDVDPEYSLAEPEEDEIAANDELR---AAPWYHVVME-DDDG 61
Query: 267 NILVAYVAEENLLASDQPDMARFDHP 292
+ Y+AE L + R +HP
Sbjct: 62 QPIHTYLAEAQLSSE-----TRDEHP 82
>sp|A8GCM7|HSPQ_SERP5 Heat shock protein HspQ OS=Serratia proteamaculans (strain 568)
GN=hspQ PE=3 SV=1
Length = 105
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V HK+ GY V+ +DP E EIA L+ P ++ V+ D P
Sbjct: 6 FGIGQQVRHKLLGYLGVVIDIDPEYSMEQPKADEIAANTDLRFAPW--YHVVMEDEEGQP 63
Query: 267 NILVAYVAEENL 278
+ Y+AE L
Sbjct: 64 --VHTYLAEAQL 73
>sp|Q7CQT0|HSPQ_SALTY Heat shock protein HspQ OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=hspQ PE=3 SV=1
Length = 105
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DP + S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPEYSLDEPSPDELAVNDELR---AAPWYHVVME-DDDG 61
Query: 267 NILVAYVAEENLLASDQPDMARFDHP 292
+ Y+AE L + R +HP
Sbjct: 62 QPVHTYLAEAQLRSE-----MRDEHP 82
>sp|Q8XFC1|HSPQ_SALTI Heat shock protein HspQ OS=Salmonella typhi GN=hspQ PE=3 SV=1
Length = 105
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DP + S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPEYSLDEPSPDELAVNDELR---AAPWYHVVME-DDDG 61
Query: 267 NILVAYVAEENLLASDQPDMARFDHP 292
+ Y+AE L + R +HP
Sbjct: 62 QPVHTYLAEAQLRSE-----MRDEHP 82
>sp|B4TSJ1|HSPQ_SALSV Heat shock protein HspQ OS=Salmonella schwarzengrund (strain
CVM19633) GN=hspQ PE=3 SV=1
Length = 105
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DP + S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPEYSLDEPSPDELAVNDELR---AAPWYHVVME-DDDG 61
Query: 267 NILVAYVAEENLLASDQPDMARFDHP 292
+ Y+AE L + R +HP
Sbjct: 62 QPVHTYLAEAQLRSE-----MRDEHP 82
>sp|C0Q8C6|HSPQ_SALPC Heat shock protein HspQ OS=Salmonella paratyphi C (strain RKS4594)
GN=hspQ PE=3 SV=1
Length = 105
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DP + S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPEYSLDEPSPDELAVNDELR---AAPWYHVVME-DDDG 61
Query: 267 NILVAYVAEENLLASDQPDMARFDHP 292
+ Y+AE L + R +HP
Sbjct: 62 QPVHTYLAEAQLRSE-----MRDEHP 82
>sp|A9N6W1|HSPQ_SALPB Heat shock protein HspQ OS=Salmonella paratyphi B (strain ATCC
BAA-1250 / SPB7) GN=hspQ PE=3 SV=1
Length = 105
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DP + S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPEYSLDEPSPDELAVNDELR---AAPWYHVVME-DDDG 61
Query: 267 NILVAYVAEENLLASDQPDMARFDHP 292
+ Y+AE L + R +HP
Sbjct: 62 QPVHTYLAEAQLRSE-----MRDEHP 82
>sp|B4T208|HSPQ_SALNS Heat shock protein HspQ OS=Salmonella newport (strain SL254)
GN=hspQ PE=3 SV=1
Length = 105
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DP + S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPEYSLDEPSPDELAVNDELR---AAPWYHVVME-DDDG 61
Query: 267 NILVAYVAEENLLASDQPDMARFDHP 292
+ Y+AE L + R +HP
Sbjct: 62 QPVHTYLAEAQLRSE-----MRDEHP 82
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117,308,541
Number of Sequences: 539616
Number of extensions: 4601420
Number of successful extensions: 13542
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 137
Number of HSP's that attempted gapping in prelim test: 13504
Number of HSP's gapped (non-prelim): 180
length of query: 334
length of database: 191,569,459
effective HSP length: 118
effective length of query: 216
effective length of database: 127,894,771
effective search space: 27625270536
effective search space used: 27625270536
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)