BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019895
(334 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 149/309 (48%), Gaps = 11/309 (3%)
Query: 9 ITMRMIAGKRYYGDNV-EDEEEARMFRDTVKEVLAVNETSNPGDFLPFLNWIGDFE-KRI 66
+++ + G +G + E +E E + + NP DF P L ++ + +R
Sbjct: 170 VSVANVIGAMCFGQHFPESSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQRF 229
Query: 67 LRLSKTMDTILQGLVDQHR---NKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKALMLT 123
++ LQ V +H +K + + + H + + I L+
Sbjct: 230 KAFNQRFLWFLQKTVQEHYQDFDKNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVND 289
Query: 124 LIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVS 183
+ AG DT + W++ LV PE+ + + EL+ +G+E SD +LPYL +
Sbjct: 290 IFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFIL 349
Query: 184 ETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFE 243
ET R + P IPH ++ D T+ G+ +P+ + VN W ++ DPELW++P+ F+PERF
Sbjct: 350 ETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFL 409
Query: 244 SSDSEA------HKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTE 297
++D A K+M FG+G+R C G LA+ + L L LLQ E+ K+D+T
Sbjct: 410 TADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLTP 469
Query: 298 GRGITMPKA 306
G+TM A
Sbjct: 470 IYGLTMKHA 478
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 157/310 (50%), Gaps = 15/310 (4%)
Query: 8 NITMRMIAGKRYYGDNVEDEEEARMFRDTVKEVLAVNETSNPGDFLPFLNWIGDFEKRIL 67
N+ + G+RY N ++ + EV+ + NP DF+P L ++ +
Sbjct: 169 NVICAICFGRRY-DHNHQELLSLVNLNNNFGEVVG---SGNPADFIPILRYLPNPSLNAF 224
Query: 68 R-LSKTMDTILQGLVDQHRN--KKAGLESM-DTMIDHML--SLQESQPQYYTDQNIKALM 121
+ L++ + +Q +V +H +K + + D++I+H L E+ +D+ I ++
Sbjct: 225 KDLNEKFYSFMQKMVKEHYKTFEKGHIRDITDSLIEHCQEKQLDENANVQLSDEKIINIV 284
Query: 122 LTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNI 181
L L AG DT + W++ LV +P V + + EL+ +G+ SD S LPY+
Sbjct: 285 LDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAF 344
Query: 182 VSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPER 241
+ ET R + P IPH ++ D ++ G+ +P+ + VN W I+ D +LW P+ F PER
Sbjct: 345 ILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPER 404
Query: 242 FESSDSE-----AHKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMT 296
F + D + K++ FG+G+R C G ++A+ V L L LLQ E+ K+DMT
Sbjct: 405 FLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLGVKVDMT 464
Query: 297 EGRGITMPKA 306
G+TM A
Sbjct: 465 PIYGLTMKHA 474
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 151/306 (49%), Gaps = 15/306 (4%)
Query: 8 NITMRMIAGKRYYGDNVEDEEEARMFRDTVKEVLAVNETSNPGDFLPFLNWIGDF----E 63
NIT +I G+R+ ++ + + +F + V+ LA + + + P WIG
Sbjct: 163 NITNLIIFGERFTYEDTDFQHMIELFSENVE--LAASASVFLYNAFP---WIGILPFGKH 217
Query: 64 KRILRLSKTMDTILQGLVDQHR-NKKAGL--ESMDTMIDHMLSLQESQPQYYTDQNIKAL 120
+++ R + + L L+++ N+K L +D +D M + ++ +N+
Sbjct: 218 QQLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFS 277
Query: 121 MLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRN 180
+ LIIAG +T+ L WA+ + +P + + E++ +G D K+PY
Sbjct: 278 VGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEA 337
Query: 181 IVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPE 240
++ E LR PL I H +S+D V GY +P+ TT++ N +++H D + W +P F PE
Sbjct: 338 VLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPE 397
Query: 241 RF-ESSDSEAHK--LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTE 297
RF +SS A K L+PF LGRR C G LA+ + L +LLQ F E D+
Sbjct: 398 RFLDSSGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKP 457
Query: 298 GRGITM 303
G+T+
Sbjct: 458 RLGMTL 463
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 151/306 (49%), Gaps = 15/306 (4%)
Query: 8 NITMRMIAGKRYYGDNVEDEEEARMFRDTVKEVLAVNETSNPGDFLPFLNWIGDF----E 63
NIT +I G+R+ ++ + + +F + V+ LA + + + P WIG
Sbjct: 163 NITNLIIFGERFTYEDTDFQHMIELFSENVE--LAASASVFLYNAFP---WIGILPFGKH 217
Query: 64 KRILRLSKTMDTILQGLVDQHR-NKKAGLES--MDTMIDHMLSLQESQPQYYTDQNIKAL 120
+++ R + + L L+++ N+K L +D +D M + ++ +N+
Sbjct: 218 QQLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFS 277
Query: 121 MLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRN 180
+ LIIAG +T+ L WA+ + +P + + E++ +G D K+PY
Sbjct: 278 VGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEA 337
Query: 181 IVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPE 240
++ E LR PL I H +S+D V GY +P+ TT++ N +++H D + W +P F PE
Sbjct: 338 VLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPE 397
Query: 241 RF-ESSDSEAHK--LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTE 297
RF +SS A K L+PF LGRR C G LA+ + L +LLQ F E D+
Sbjct: 398 RFLDSSGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKP 457
Query: 298 GRGITM 303
G+T+
Sbjct: 458 RLGMTL 463
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 147/295 (49%), Gaps = 24/295 (8%)
Query: 2 FSELTFNITMRMIAGKRYYGDNVEDEEEARMFRDTVKEVLAV--NETSNPGDFLPFLNWI 59
FS LT +I + G + ++ F D V++++ + + D +PFL +
Sbjct: 165 FSLLTCSIICYLTFGNK-------EDTLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFF 217
Query: 60 GDFEKRILRLSKTM---DTILQGLVDQHRNKKAGLESMDTMIDHMLS-----LQESQPQY 111
+ + RL + + D +++ + +H+ + D M D+ML E P
Sbjct: 218 PN--PGLWRLKQAIENRDHMVEKQLRRHKESMVAGQWRD-MTDYMLQGVGRQRVEEGPGQ 274
Query: 112 YTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVG--QEC-LID 168
+ ++ ++ L I G +T+A TL WA+A L++HPE+ + + EL+ ++G C +
Sbjct: 275 LLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVT 334
Query: 169 ESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDP 228
D ++LP L ++E LRL P PL +PHR++ ++ GYD+P ++ N H D
Sbjct: 335 YKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDE 394
Query: 229 ELWDEPTCFKPERFESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCF 283
+W++P F+P+RF + L FG G R C G SLA+ + + L LLQ F
Sbjct: 395 TVWEQPHEFRPDRFLEPGANPSALA-FGCGARVCLGESLARLELFVVLARLLQAF 448
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 139/288 (48%), Gaps = 15/288 (5%)
Query: 8 NITMRMIAGKRYYGDNVEDEEEARMFRDTVKEVLA-VNETSNPGDFLPFLNWIGDFEKRI 66
N+ + G+R+ D+ + ++ +KE + E N +P L I ++
Sbjct: 162 NVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNA---VPVLLHIPALAGKV 218
Query: 67 LRLSKTMDTILQGLVDQHR----NKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKALML 122
LR K T L L+ +HR + + + + M + + + D+N++ ++
Sbjct: 219 LRFQKAFLTQLDELLTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVA 278
Query: 123 TLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIV 182
L AG+ T++ TL W + ++ HP+V + + E++ +GQ + D + +PY ++
Sbjct: 279 DLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVI 338
Query: 183 SETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERF 242
E R PL + H +S D V G+ +P+ TTL+ N ++ +D +W++P F PE F
Sbjct: 339 HEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHF 398
Query: 243 ESSDSEAH-----KLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEW 285
D++ H +PF GRRAC G LA+ + L SLLQ F +
Sbjct: 399 --LDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSF 444
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 142/277 (51%), Gaps = 25/277 (9%)
Query: 51 DFLPFLNWIGDFEKRILRLSKTMDTILQGLVD---QHRNKKAGLESMDTMIDHMLSLQ-- 105
D +P W+ F + L K+ I L++ ++ +K +S+ M+D ++ +
Sbjct: 198 DLVP---WLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMN 254
Query: 106 --------ESQPQYYTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAEL 157
+ + +D +I + + AG++T+ ++W +A L+++P+V K E+
Sbjct: 255 SDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEI 314
Query: 158 NAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTL 217
+ VG SD ++L L + E LRL P AP+LIPH+++ D ++G + V + T +
Sbjct: 315 DQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEV 374
Query: 218 LVNAWAIHRDPELWDEPTCFKPERFESSD-----SEAHKLMPFGLGRRACPGASLAQRLV 272
++N WA+H + + W +P F PERF + S + +PFG G R+C G LA++ +
Sbjct: 375 IINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQEL 434
Query: 273 GLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVAL 309
L + LLQ F+ + + ++ EG +PK V L
Sbjct: 435 FLIMAWLLQRFDLEVPDDGQLPSLEG----IPKVVFL 467
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 117/230 (50%), Gaps = 11/230 (4%)
Query: 65 RILRLSKTMDTILQGLVDQHR----NKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKAL 120
++LR K T L L+ +HR + + + + M + + + D+N++ +
Sbjct: 217 KVLRFQKAFLTQLDELLTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIV 276
Query: 121 MLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRN 180
+ L AG+ T++ TL W + ++ HP+V + + E++ +GQ + D + +PY
Sbjct: 277 VADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTA 336
Query: 181 IVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPE 240
++ E R PL + H +S D V G+ +P+ TTL+ N ++ +D +W++P F PE
Sbjct: 337 VIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPE 396
Query: 241 RFESSDSEAH-----KLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEW 285
F D++ H +PF GRRAC G LA+ + L SLLQ F +
Sbjct: 397 HF--LDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSF 444
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 132/246 (53%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T +IAG +T++
Sbjct: 212 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 271
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P AP
Sbjct: 272 GLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 330
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 331 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 390
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RACPG A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 391 FKPFGNGQRACPGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLK-PEGFVVKA 449
Query: 312 MRKACP 317
K P
Sbjct: 450 KSKKIP 455
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 147/308 (47%), Gaps = 18/308 (5%)
Query: 1 MFSELTFNITMRMIAGKRYYGDNVEDEEEARMFRDTVKEVLAVNETSNPGD----FLPFL 56
+F +T NI ++ GKR++ + E + +F T + +V G F FL
Sbjct: 151 LFQSITANIICSIVFGKRFHYQDQEFLKMLNLFYQTFSLISSVF-----GQLFELFSGFL 205
Query: 57 NWIGDFEKRILRLSKTMDTILQGLVDQHR---NKKAGLESMDTMIDHMLSLQESQPQYYT 113
+++ + + ++ + V++HR + A + +DT + HM + + ++
Sbjct: 206 KHFPGAHRQVYKNLQEINAYIGHSVEKHRETLDPSAPRDLIDTYLLHMEKEKSNAHSEFS 265
Query: 114 DQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLS 173
QN+ L+L AG +T++ TL + ++ +P V + E+ +G + D +
Sbjct: 266 HQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRA 325
Query: 174 KLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDT-TLLVNAWAIHRDPELWD 232
K+PY ++ E R + P+ +PH + + GY +P+DT L+ + A+H DP ++
Sbjct: 326 KMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALH-DPHYFE 384
Query: 233 EPTCFKPERFESSDSEAHK---LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKR-I 288
+P F P+ F ++ K +PF LG+R C G +A+ + L ++LQ F +
Sbjct: 385 KPDAFNPDHFLDANGALKKTEAFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASPV 444
Query: 289 GEDKIDMT 296
+ ID+T
Sbjct: 445 APEDIDLT 452
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 131/246 (53%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T +IAG +T++
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 270
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 329
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 330 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 390 FKPFGNGQRACEGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLK-PEGFVVKA 448
Query: 312 MRKACP 317
K P
Sbjct: 449 KSKKIP 454
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 131/246 (53%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T +IAG +T++
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 270
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 329
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 330 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLK-PEGFVVKA 448
Query: 312 MRKACP 317
K P
Sbjct: 449 KSKKIP 454
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 131/246 (53%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T +IAG +T++
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 270
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 329
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 330 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLK-PEGFVVKA 448
Query: 312 MRKACP 317
K P
Sbjct: 449 KSKKIP 454
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 131/246 (53%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T +IAG +T++
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 270
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 329
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 330 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLK-PEGFVVKA 448
Query: 312 MRKACP 317
K P
Sbjct: 449 KSKKIP 454
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 131/246 (53%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T +IAG +T++
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 270
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 329
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 330 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLK-PEGFVVKA 448
Query: 312 MRKACP 317
K P
Sbjct: 449 KSKKIP 454
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 131/246 (53%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T +IAG +T++
Sbjct: 212 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 271
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P AP
Sbjct: 272 GLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 330
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 331 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 390
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 391 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLK-PEGFVVKA 449
Query: 312 MRKACP 317
K P
Sbjct: 450 KSKKIP 455
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 131/246 (53%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T +IAG +T++
Sbjct: 212 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 271
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P AP
Sbjct: 272 GLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 330
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 331 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 390
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 391 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLK-PEGFVVKA 449
Query: 312 MRKACP 317
K P
Sbjct: 450 KSKKIP 455
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 131/246 (53%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T +IAG +T++
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 270
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 329
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 330 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 390 FKPFGNGQRACIGKQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLK-PEGFVVKA 448
Query: 312 MRKACP 317
K P
Sbjct: 449 KSKKIP 454
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 131/246 (53%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T +IAG +T++
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 270
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 329
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 330 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLK-PEGFVVKA 448
Query: 312 MRKACP 317
K P
Sbjct: 449 KSKKIP 454
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 131/246 (53%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T +IAG +T++
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 270
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 329
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 330 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLK-PEGFVVKA 448
Query: 312 MRKACP 317
K P
Sbjct: 449 KSKKIP 454
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 131/246 (53%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T +IAG +T++
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 270
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 329
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 330 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLK-PEGFVVKA 448
Query: 312 MRKACP 317
K P
Sbjct: 449 KSKKIP 454
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 131/246 (53%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T +IAG +T++
Sbjct: 214 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 273
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P AP
Sbjct: 274 GLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 332
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 333 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 392
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 393 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLK-PEGFVVKA 451
Query: 312 MRKACP 317
K P
Sbjct: 452 KSKKIP 457
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 132/246 (53%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T +IAG ++++
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTS 270
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 329
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 330 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RAC G A L LG +L+ F+++ ++D+ E + + P+ ++
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETQ-LLKPEGFVVKA 448
Query: 312 MRKACP 317
K P
Sbjct: 449 KSKKIP 454
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 131/246 (53%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T +IAG +T++
Sbjct: 212 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 271
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P AP
Sbjct: 272 GLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 330
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 331 PFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 390
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 391 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLK-PEGFVVKA 449
Query: 312 MRKACP 317
K P
Sbjct: 450 KSKKIP 455
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 130/246 (52%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML ++ + + D+NI+ ++T +IAG +T++
Sbjct: 212 VMNDLVDKIIADRKASGEQSDDLLTHMLHGKDPETGEPLDDENIRYQIITFLIAGHETTS 271
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LR+ P AP
Sbjct: 272 GLLTFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRIWPTAP 330
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 331 AFSLYAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAIPQHA 390
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RAC G A L LG +L+ F+++ ++D+ E + PK ++
Sbjct: 391 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIEETLTLK-PKGFVIKA 449
Query: 312 MRKACP 317
K P
Sbjct: 450 KSKKIP 455
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 131/246 (53%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T +IAG +T++
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 270
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 329
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 330 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
P+G G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 390 FKPYGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLK-PEGFVVKA 448
Query: 312 MRKACP 317
K P
Sbjct: 449 KSKKIP 454
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 131/246 (53%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T +IAG +T++
Sbjct: 214 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 273
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P +P
Sbjct: 274 GLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTSP 332
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 333 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 392
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 393 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLK-PEGFVVKA 451
Query: 312 MRKACP 317
K P
Sbjct: 452 KSKKIP 457
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 144/325 (44%), Gaps = 28/325 (8%)
Query: 8 NITMRMIAGKRYYGDNVEDEEEARMFRDTVKEVLAVNETSNPG---DFLPFLNWIGDFEK 64
N+ + G RY D+ E FR+ + T G D +P+L + + +
Sbjct: 163 NVMSAVCFGCRYSHDDPE-------FRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVR 215
Query: 65 RILRLSKTMDT-----ILQGLVDQHRNKKAGLESMDTMIDHMLSLQESQPQYYTD----- 114
+ R + ++ IL + + + G D M +LS ++
Sbjct: 216 TVFREFEQLNRNFSNFILDKFLRHCESLRPGAAPRDMMDAFILSAEKKAAGDSHGGGARL 275
Query: 115 --QNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDL 172
+N+ A + + A DT + L+W + +P+V +AEL+ VG++ L D
Sbjct: 276 DLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQ 335
Query: 173 SKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWD 232
LPY+ + E +R + P+ IPH ++ + +V GY +P+DT + VN W+++ DP W
Sbjct: 336 PNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWP 395
Query: 233 EPTCFKPERFESSDSEAHK-----LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKR 287
P F P RF D +K +M F +G+R C G L++ + L + L +++
Sbjct: 396 NPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRA 455
Query: 288 IGEDKIDMTEGRGITM-PKAVALEV 311
+ M G+T+ PK+ + V
Sbjct: 456 NPNEPAKMNFSYGLTIKPKSFKVNV 480
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 131/246 (53%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T +IAG +T++
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITELIAGHETTS 270
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 329
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 330 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLK-PEGFVVKA 448
Query: 312 MRKACP 317
K P
Sbjct: 449 KSKKIP 454
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 130/246 (52%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T +IAG + ++
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHENTS 270
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 329
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 330 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLK-PEGFVVKA 448
Query: 312 MRKACP 317
K P
Sbjct: 449 KSKKIP 454
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 130/246 (52%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T +IAG + ++
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATS 270
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 329
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 330 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLK-PEGFVVKA 448
Query: 312 MRKACP 317
K P
Sbjct: 449 KSKKIP 454
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 130/246 (52%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T +IAG +T++
Sbjct: 214 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 273
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P P
Sbjct: 274 GLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTVP 332
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 333 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 392
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 393 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLK-PEGFVVKA 451
Query: 312 MRKACP 317
K P
Sbjct: 452 KSKKIP 457
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 131/246 (53%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T +IAG ++++
Sbjct: 212 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTS 271
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P AP
Sbjct: 272 GLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 330
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 331 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 390
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 391 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL-LLKPEGFVVKA 449
Query: 312 MRKACP 317
K P
Sbjct: 450 KSKKIP 455
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 130/246 (52%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T +IAG + ++
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATS 270
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 329
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 330 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLK-PEGFVVKA 448
Query: 312 MRKACP 317
K P
Sbjct: 449 KSKKIP 454
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 131/246 (53%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T +IAG ++++
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTS 270
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 329
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 330 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL-LLKPEGFVVKA 448
Query: 312 MRKACP 317
K P
Sbjct: 449 KSKKIP 454
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 130/246 (52%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T +I G +T++
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIKGHETTS 270
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 329
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 330 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLK-PEGFVVKA 448
Query: 312 MRKACP 317
K P
Sbjct: 449 KSKKIP 454
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 130/246 (52%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T +I G +T++
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIQGHETTS 270
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 329
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 330 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLK-PEGFVVKA 448
Query: 312 MRKACP 317
K P
Sbjct: 449 KSKKIP 454
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 130/246 (52%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T +I G +T++
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLICGHETTS 270
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 329
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 330 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLK-PEGFVVKA 448
Query: 312 MRKACP 317
K P
Sbjct: 449 KSKKIP 454
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 130/246 (52%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T +IAG + ++
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATS 270
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 329
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 330 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLK-PEGFVVKA 448
Query: 312 MRKACP 317
K P
Sbjct: 449 KSKKIP 454
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 130/246 (52%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T +I G +T++
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIEGHETTS 270
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 329
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 330 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLK-PEGFVVKA 448
Query: 312 MRKACP 317
K P
Sbjct: 449 KSKKIP 454
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 130/246 (52%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T +I G +T++
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIMGHETTS 270
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 329
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 330 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLK-PEGFVVKA 448
Query: 312 MRKACP 317
K P
Sbjct: 449 KSKKIP 454
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 131/246 (53%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T +IAG +T++
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 270
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 329
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 330 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
P+G G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 390 FKPWGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLK-PEGFVVKA 448
Query: 312 MRKACP 317
K P
Sbjct: 449 KSKKIP 454
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 130/246 (52%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T +I G +T++
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIHGHETTS 270
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 329
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 330 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLK-PEGFVVKA 448
Query: 312 MRKACP 317
K P
Sbjct: 449 KSKKIP 454
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 130/246 (52%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T +IAG +T++
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 270
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 329
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 330 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
P G G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 390 FKPHGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLK-PEGFVVKA 448
Query: 312 MRKACP 317
K P
Sbjct: 449 KSKKIP 454
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 129/246 (52%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML ++ + + D+NI+ ++T +IAG +T++
Sbjct: 217 VMNDLVDKIIADRKASGEQSDDLLTHMLHGKDPETGEPLDDENIRYQIVTFLIAGHETTS 276
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L + + LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P AP
Sbjct: 277 GLLSFTLYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 335
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + ++V +HRD +W D+ F+PERFE+ + H
Sbjct: 336 AFSLYAKEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 395
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 396 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLK-PEGFVVKA 454
Query: 312 MRKACP 317
K P
Sbjct: 455 KSKKIP 460
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 130/246 (52%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T +IAG +T++
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 270
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 329
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 330 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
P G G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 390 FKPAGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLK-PEGFVVKA 448
Query: 312 MRKACP 317
K P
Sbjct: 449 KSKKIP 454
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 114/231 (49%), Gaps = 6/231 (2%)
Query: 86 NKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITLEWAMANLVN 145
+K ++ + MID S + + +D + A + I AG +T++ L + M L
Sbjct: 243 TQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELAT 302
Query: 146 HPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCT 205
HP+V + + E++A + + + ++ YL +V+ETLRL P A + + D
Sbjct: 303 HPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIA-MRLERVCKKDVE 361
Query: 206 VGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDS---EAHKLMPFGLGRRAC 262
+ G +P+ +++ ++A+HRDP+ W EP F PERF + + + PFG G R C
Sbjct: 362 INGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNC 421
Query: 263 PGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEG-RGITMP-KAVALEV 311
G A + L L +LQ F +K E +I + G+ P K V L+V
Sbjct: 422 IGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPEKPVVLKV 472
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 114/231 (49%), Gaps = 6/231 (2%)
Query: 86 NKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITLEWAMANLVN 145
+K ++ + MID S + + +D + A + I AG +T++ L + M L
Sbjct: 244 TQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELAT 303
Query: 146 HPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCT 205
HP+V + + E++A + + + ++ YL +V+ETLRL P A + + D
Sbjct: 304 HPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIA-MRLERVCKKDVE 362
Query: 206 VGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDS---EAHKLMPFGLGRRAC 262
+ G +P+ +++ ++A+HRDP+ W EP F PERF + + + PFG G R C
Sbjct: 363 INGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNC 422
Query: 263 PGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEG-RGITMP-KAVALEV 311
G A + L L +LQ F +K E +I + G+ P K V L+V
Sbjct: 423 IGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPEKPVVLKV 473
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 114/231 (49%), Gaps = 6/231 (2%)
Query: 86 NKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITLEWAMANLVN 145
+K ++ + MID S + + +D + A + I AG +T++ L + M L
Sbjct: 242 TQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELAT 301
Query: 146 HPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCT 205
HP+V + + E++A + + + ++ YL +V+ETLRL P A + + D
Sbjct: 302 HPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIA-MRLERVCKKDVE 360
Query: 206 VGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDS---EAHKLMPFGLGRRAC 262
+ G +P+ +++ ++A+HRDP+ W EP F PERF + + + PFG G R C
Sbjct: 361 INGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNC 420
Query: 263 PGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEG-RGITMP-KAVALEV 311
G A + L L +LQ F +K E +I + G+ P K V L+V
Sbjct: 421 IGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPEKPVVLKV 471
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 128/246 (52%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T + AG + ++
Sbjct: 212 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATS 271
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P P
Sbjct: 272 GLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTGP 330
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 331 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 390
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 391 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL-VLKPEGFVVKA 449
Query: 312 MRKACP 317
K P
Sbjct: 450 KSKKIP 455
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 128/246 (52%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T + AG + ++
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATS 270
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ A AE A+V + + + +L Y+ +++E LRL P P
Sbjct: 271 GLLSFALYFLVKNPHVLQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTGP 329
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 330 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL-VLKPEGFVVKA 448
Query: 312 MRKACP 317
K P
Sbjct: 449 KSKKIP 454
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 128/246 (52%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T + AG + ++
Sbjct: 212 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATS 271
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P L+ A AE A+V + + + +L Y+ +++E LRL P AP
Sbjct: 272 GLLSFALYFLVKNPHELQKA-AEEAARVLVDPVPSHKQVKQLKYVGMVLNEALRLWPTAP 330
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 331 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAIPQHA 390
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 391 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLK-PEGFVVKA 449
Query: 312 MRKACP 317
K P
Sbjct: 450 KSKKIP 455
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 122/253 (48%), Gaps = 9/253 (3%)
Query: 52 FLPFLNWIGDFEKRILRLSKTMDTILQGLVDQHRNKKAGLESMDTMIDHMLSLQE--SQP 109
F FL + ++I R + ++T + V++HR D + ++L +++ S P
Sbjct: 201 FSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDP 260
Query: 110 QY-YTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLID 168
+ QN+ +L+L AG +T++ TL + ++ +P V + + E+ +G
Sbjct: 261 SSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPA 320
Query: 169 ESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLL-VNAWAIHRD 227
D +K+PY ++ E RL P +PH + D GY +P++T + V + A+H D
Sbjct: 321 LDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALH-D 379
Query: 228 PELWDEPTCFKPERFESSDSEAHK---LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFE 284
P ++ P F P F ++ + MPF LG+R C G +A+ + L ++LQ F
Sbjct: 380 PRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICAGEGIARTELFLFFTTILQNFS 439
Query: 285 WKR-IGEDKIDMT 296
+ + ID+T
Sbjct: 440 IASPVPPEDIDLT 452
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 128/246 (52%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ HML+ ++ + + D+NI+ ++T + AG + ++
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATS 270
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P L+ A AE A+V + + + +L Y+ +++E LRL P AP
Sbjct: 271 GLLSFALYFLVKNPHELQKA-AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 329
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + L+V +HRD +W D+ F+PERFE+ + H
Sbjct: 330 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLK-PEGFVVKA 448
Query: 312 MRKACP 317
K P
Sbjct: 449 KSKKIP 454
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 122/253 (48%), Gaps = 9/253 (3%)
Query: 52 FLPFLNWIGDFEKRILRLSKTMDTILQGLVDQHRNKKAGLESMDTMIDHMLSLQE--SQP 109
F FL + ++I R + ++T + V++HR D + ++L +++ S P
Sbjct: 201 FSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDP 260
Query: 110 QY-YTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLID 168
+ QN+ +L+L AG +T++ TL + ++ +P V + + E+ +G
Sbjct: 261 SSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPA 320
Query: 169 ESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLL-VNAWAIHRD 227
D +K+PY ++ E RL P +PH + D GY +P++T + V + A+H D
Sbjct: 321 LDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALH-D 379
Query: 228 PELWDEPTCFKPERFESSDSEAHK---LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFE 284
P ++ P F P F ++ + MPF LG+R C G +A+ + L ++LQ F
Sbjct: 380 PRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFS 439
Query: 285 WKR-IGEDKIDMT 296
+ + ID+T
Sbjct: 440 IASPVPPEDIDLT 452
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 122/253 (48%), Gaps = 9/253 (3%)
Query: 52 FLPFLNWIGDFEKRILRLSKTMDTILQGLVDQHRNKKAGLESMDTMIDHMLSLQE--SQP 109
F FL + ++I R + ++T + V++HR D + ++L +++ S P
Sbjct: 201 FSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDP 260
Query: 110 QY-YTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLID 168
+ QN+ +L+L AG +T++ TL + ++ +P V + + E+ +G
Sbjct: 261 SSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPA 320
Query: 169 ESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLL-VNAWAIHRD 227
D +K+PY ++ E RL P +PH + D GY +P++T + V + A+H D
Sbjct: 321 LDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALH-D 379
Query: 228 PELWDEPTCFKPERFESSDSEAHK---LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFE 284
P ++ P F P F ++ + MPF LG+R C G +A+ + L ++LQ F
Sbjct: 380 PRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFS 439
Query: 285 WKR-IGEDKIDMT 296
+ + ID+T
Sbjct: 440 IASPVPPEDIDLT 452
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 122/253 (48%), Gaps = 9/253 (3%)
Query: 52 FLPFLNWIGDFEKRILRLSKTMDTILQGLVDQHRNKKAGLESMDTMIDHMLSLQE--SQP 109
F FL + ++I R + ++T + V++HR D + ++L +++ S P
Sbjct: 201 FSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDP 260
Query: 110 QY-YTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLID 168
+ QN+ +L+L AG +T++ TL + ++ +P V + + E+ +G
Sbjct: 261 SSEFHHQNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPA 320
Query: 169 ESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLL-VNAWAIHRD 227
D +K+PY ++ E RL P +PH + D GY +P++T + V + A+H D
Sbjct: 321 LDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALH-D 379
Query: 228 PELWDEPTCFKPERFESSDSEAHK---LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFE 284
P ++ P F P F ++ + MPF LG+R C G +A+ + L ++LQ F
Sbjct: 380 PRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFS 439
Query: 285 WKR-IGEDKIDMT 296
+ + ID+T
Sbjct: 440 IASPVPPEDIDLT 452
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 146/307 (47%), Gaps = 16/307 (5%)
Query: 1 MFSELTFNITMRMIAGKRYYGDNVEDEEEARMFRDTVKEVLAVNETSNPGDFLPFLNWIG 60
+F +T NI ++ GKR+ + +D R+ D + ++ + + F F ++
Sbjct: 151 LFHSITSNIICSIVFGKRF---DYKDPVFLRLL-DLFFQSFSLISSFSSQVFELFSGFLK 206
Query: 61 DF---EKRILRLSKTMDTILQGLVDQHRNKKAGLESMDTMIDHMLSLQE--SQPQY-YTD 114
F ++I R + ++T + V++HR D + ++L +++ S P +
Sbjct: 207 HFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHH 266
Query: 115 QNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSK 174
QN+ +L+L AG +T++ TL + ++ +P V + + E+ +G D +K
Sbjct: 267 QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAK 326
Query: 175 LPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLL-VNAWAIHRDPELWDE 233
+PY ++ E RL P +PH + D GY +P++T + V + A+H DP ++
Sbjct: 327 MPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALH-DPRYFET 385
Query: 234 PTCFKPERFESSDSEAHK---LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKR-IG 289
P F P F ++ + MPF LG+R C G +A+ + L ++LQ F +
Sbjct: 386 PNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVP 445
Query: 290 EDKIDMT 296
+ ID+T
Sbjct: 446 PEDIDLT 452
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 126/246 (51%), Gaps = 6/246 (2%)
Query: 76 ILQGLVDQH-RNKKAGLESMDTMIDHMLSLQESQP-QYYTDQNIKALMLTLIIAGIDTSA 133
++ LVD+ ++KA E D ++ ML+ ++ + + D NI ++T +IAG +T++
Sbjct: 211 VMNDLVDKIIADRKASGEQSDDLLTQMLNGKDPETGEPLDDGNISYQIITFLIAGHETTS 270
Query: 134 ITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
L +A+ LV +P VL+ AE +V + + + +L Y+ +++E LRL P AP
Sbjct: 271 GLLSFALYFLVKNPHVLQKV-AEEATRVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 329
Query: 194 LLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW-DEPTCFKPERFESSDS-EAHK 251
+ D G Y + + ++V +HRD +W D+ F+PERFE+ + H
Sbjct: 330 AFSLYAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHA 389
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEV 311
PFG G+RAC G A L LG +L+ F+++ ++D+ E + P+ ++
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLK-PEGFVVKA 448
Query: 312 MRKACP 317
K P
Sbjct: 449 KSKKIP 454
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 120/254 (47%), Gaps = 18/254 (7%)
Query: 51 DFLPFLNWIGDFEKRILRLSKTMDTILQGLVDQHRNKKAGLESMDT-----MIDHMLSLQ 105
+F P +++ ++L+ M + + V +H+ ESMD ID L
Sbjct: 201 NFSPIIDYFPGTHNKLLKNVAFMKSYILEKVKEHQ------ESMDMNNPQDFIDCFLMKM 254
Query: 106 E----SQPQYYTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQV 161
E +QP +T ++++ + L AG +T++ TL +A+ L+ HPEV + E+ +
Sbjct: 255 EKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVI 314
Query: 162 GQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNA 221
G+ D S +PY +V E R P +PH + D Y +P+ TT+L++
Sbjct: 315 GRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISL 374
Query: 222 WAIHRDPELWDEPTCFKPERF--ESSDSEAHK-LMPFGLGRRACPGASLAQRLVGLTLGS 278
++ D + + P F P F E + + K MPF G+R C G +LA + L L S
Sbjct: 375 TSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGKRICVGEALAGMELFLFLTS 434
Query: 279 LLQCFEWKRIGEDK 292
+LQ F K + + K
Sbjct: 435 ILQNFNLKSLVDPK 448
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 13/223 (5%)
Query: 77 LQGLVD------QHRNKKAGLESMDTMIDHML-SLQESQPQYYTDQNIKALMLT---LII 126
LQGL D +H + S ID L +QE + T+ +K L++T L
Sbjct: 219 LQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFF 278
Query: 127 AGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETL 186
AG +T + TL + L+ HPEV E++ +G+ D +K+PY ++ E
Sbjct: 279 AGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYTEAVIHEIQ 338
Query: 187 RLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSD 246
R P+ + HR + D + +P+ T + ++ RDP + P F P+ F
Sbjct: 339 RFGDMLPMGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFLDKK 398
Query: 247 SEAHK---LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWK 286
+ K +PF +G+R C G LA+ + L +++Q F +K
Sbjct: 399 GQFKKSDAFVPFSIGKRYCFGEGLARMELFLFFTTIMQNFRFK 441
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 119/254 (46%), Gaps = 18/254 (7%)
Query: 51 DFLPFLNWIGDFEKRILRLSKTMDTILQGLVDQHRNKKAGLESMDT-----MIDHMLSLQ 105
+F L++ ++L+ M + + V +H+ ESMD ID L
Sbjct: 199 NFPALLDYFPGTHNKLLKNVAFMKSYILEKVKEHQ------ESMDMNNPQDFIDCFLMKM 252
Query: 106 E----SQPQYYTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQV 161
E +QP +T ++++ + L AG +T++ TL +A+ L+ HPEV + E+ +
Sbjct: 253 EKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVI 312
Query: 162 GQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNA 221
G+ D S +PY +V E R P +PH + D Y +P+ TT+L++
Sbjct: 313 GRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISL 372
Query: 222 WAIHRDPELWDEPTCFKPERF--ESSDSEAHK-LMPFGLGRRACPGASLAQRLVGLTLGS 278
++ D + + P F P F E + + K MPF G+R C G +LA + L L S
Sbjct: 373 TSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGKRICVGEALAGMELFLFLTS 432
Query: 279 LLQCFEWKRIGEDK 292
+LQ F K + + K
Sbjct: 433 ILQNFNLKSLVDPK 446
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 128/265 (48%), Gaps = 10/265 (3%)
Query: 51 DFLPFLNWI-GDFEKRILRLSKTMDTILQGLVDQHR--NKKAGLESMDTMIDHMLSLQES 107
+F FL+++ G K I +++ + + + + + H+ + + D ++ M + S
Sbjct: 199 NFPSFLHYLPGSHRKVIKNVAEVKEYVSERVKEHHQSLDPNCPRDLTDCLLVEMEKEKHS 258
Query: 108 QPQYYTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLI 167
+ YT I + L AG +T++ TL + + L+ +PE+ + E++ +G +
Sbjct: 259 AERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIP 318
Query: 168 DESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRD 227
D ++PY+ +V E R P +PH ++ D GY +P+ T ++ ++ D
Sbjct: 319 AIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYD 378
Query: 228 PELWDEPTCFKPERFESSDSE---AHKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFE 284
+ + +P FKPE F + + + + PF G+R C G LA+ + L L ++LQ F
Sbjct: 379 NQEFPDPEKFKPEHFLNENGKFKYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFN 438
Query: 285 WKRIGEDK-IDMTE---GRGITMPK 305
K + + K ID++ G G P+
Sbjct: 439 LKPLVDPKDIDLSPIHIGFGCIPPR 463
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 13/224 (5%)
Query: 76 ILQGLVD------QHRNKKAGLESMDTMIDHML-SLQESQPQYYTDQNIKALMLT---LI 125
+LQGL D +H + S ID L +QE + T+ +K L++T L
Sbjct: 218 LLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLF 277
Query: 126 IAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSET 185
I G +T + TL + L+ HPEV E++ +G+ D +K+PY+ ++ E
Sbjct: 278 IGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEI 337
Query: 186 LRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESS 245
R P+ + R D + +P+ T + ++ RDP + P F P+ F +
Sbjct: 338 QRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNE 397
Query: 246 DSEAHK---LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWK 286
+ K +PF +G+R C G LA+ + L +++Q F K
Sbjct: 398 KGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLK 441
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 13/224 (5%)
Query: 76 ILQGLVD------QHRNKKAGLESMDTMIDHML-SLQESQPQYYTDQNIKALMLT---LI 125
+LQGL D +H + S ID L +QE + T+ +K L++T L
Sbjct: 218 LLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLF 277
Query: 126 IAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSET 185
I G +T + TL + L+ HPEV E++ +G+ D +K+PY+ ++ E
Sbjct: 278 IGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEI 337
Query: 186 LRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESS 245
R P+ + R D + +P+ T + ++ RDP + P F P+ F +
Sbjct: 338 QRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNE 397
Query: 246 DSEAHK---LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWK 286
+ K +PF +G+R C G LA+ + L +++Q F K
Sbjct: 398 KGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLK 441
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 13/224 (5%)
Query: 76 ILQGLVD------QHRNKKAGLESMDTMIDHML-SLQESQPQYYTDQNIKALMLT---LI 125
+LQGL D +H + S ID L +QE + T+ +K L++T L
Sbjct: 218 LLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLF 277
Query: 126 IAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSET 185
AG +T + TL + L+ HPEV E++ +G+ D +K+PY+ ++ E
Sbjct: 278 FAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEI 337
Query: 186 LRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESS 245
R P+ + R D + +P+ T + ++ RDP + P F P+ F +
Sbjct: 338 QRFGDVIPMGLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNE 397
Query: 246 DSEAHK---LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWK 286
+ K +PF +G+R C G LA+ + L +++Q F K
Sbjct: 398 KGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLK 441
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 13/224 (5%)
Query: 76 ILQGLVD------QHRNKKAGLESMDTMIDHML-SLQESQPQYYTDQNIKALMLT---LI 125
+LQGL D +H + S ID L +QE + T+ +K L++T L
Sbjct: 218 LLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLF 277
Query: 126 IAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSET 185
+ G +T + TL + L+ HPEV E++ +G+ D +K+PY+ ++ E
Sbjct: 278 VGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEI 337
Query: 186 LRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESS 245
R P+ + R D + +P+ T + ++ RDP + P F P+ F +
Sbjct: 338 QRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNE 397
Query: 246 DSEAHK---LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWK 286
+ K +PF +G+R C G LA+ + L +++Q F K
Sbjct: 398 KGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLK 441
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 13/223 (5%)
Query: 77 LQGLVD------QHRNKKAGLESMDTMIDHML-SLQESQPQYYTDQNIKALMLT---LII 126
LQGL D +H + S ID L +QE + T+ +K L++T L I
Sbjct: 219 LQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFI 278
Query: 127 AGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETL 186
G +T + TL + L+ HPEV E++ +G+ D +K+PY+ ++ E
Sbjct: 279 GGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQ 338
Query: 187 RLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSD 246
R P+ + R D + +P+ T + ++ RDP + P F P+ F +
Sbjct: 339 RFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEK 398
Query: 247 SEAHK---LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWK 286
+ K +PF +G+R C G LA+ + L +++Q F K
Sbjct: 399 GQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLK 441
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 94/189 (49%), Gaps = 10/189 (5%)
Query: 114 DQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLS 173
D+ + +T IAG +TSA L + + L PE++ +AE++ +G + +D DL
Sbjct: 241 DEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLG 300
Query: 174 KLPYLRNIVSETLRLNPAA----PLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPE 229
+L YL ++ E+LRL P A LL ++ + G VP +T LL + + + R
Sbjct: 301 RLQYLSQVLKESLRLYPPAWGTFRLL-----EEETLIDGVRVPGNTPLLFSTYVMGRMDT 355
Query: 230 LWDEPTCFKPERF-ESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRI 288
+++P F P+RF + PF LG R+C G AQ V + + LLQ E++ +
Sbjct: 356 YFEDPLTFNPDRFGPGAPKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLV 415
Query: 289 GEDKIDMTE 297
+ + E
Sbjct: 416 PGQRFGLQE 424
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 3/202 (1%)
Query: 94 MDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNA 153
+D + M +++Q + +N+ + L +AG +T++ TL + + L+ HPEV
Sbjct: 246 IDCFLIKMEQEKDNQKSEFNIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHPEVTAKV 305
Query: 154 RAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPR 213
+ E++ +G+ D S +PY +V E R + P +PH + D Y +P+
Sbjct: 306 QEEIDHVIGRHRSPCMQDRSHMPYTDAVVHEIQRYSDLVPTGVPHAVTTDTKFRNYLIPK 365
Query: 214 DTTLLVNAWAIHRDPELWDEPTCFKPERFESSDSEAHK---LMPFGLGRRACPGASLAQR 270
TT++ ++ D + + P F P F + K MPF G+R C G LA+
Sbjct: 366 GTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFKKSDYFMPFSAGKRICAGEGLARM 425
Query: 271 LVGLTLGSLLQCFEWKRIGEDK 292
+ L L ++LQ F K + + K
Sbjct: 426 ELFLFLTTILQNFNLKSVDDLK 447
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 103/206 (50%), Gaps = 5/206 (2%)
Query: 87 KKAGLESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNH 146
++A + D ++ +L ++ +Q I ++ ++ G +T A T+ W + L +H
Sbjct: 234 RRASGQKPDDLLTALLEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADH 293
Query: 147 PEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTV 206
PE R E+ A G + E D+ KL + N++ E +RL PA +L R+ + +
Sbjct: 294 PEHADRIRDEVEAVTGGRPVAFE-DVRKLRHTGNVIVEAMRLRPAVWVLT-RRAVAESEL 351
Query: 207 GGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERF---ESSDSEAHKLMPFGLGRRACP 263
GGY +P ++ + +AI RDP+ +D+ F P+R+ +++ + + PF G+R CP
Sbjct: 352 GGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAANVPKYAMKPFSAGKRKCP 411
Query: 264 GASLAQRLVGLTLGSLLQCFEWKRIG 289
+ + L +L + ++++
Sbjct: 412 SDHFSMAQLTLITAALATKYRFEQVA 437
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 119/250 (47%), Gaps = 4/250 (1%)
Query: 51 DFLPFLNWIGDFEKRILRLSKTMDTILQGLVDQHRNKKAGLESMDTMIDHMLSLQESQPQ 110
+F L++ K +L+ + + + V +H+ D + ++ +++
Sbjct: 200 NFPALLDYFPGIHKTLLKNADYIKNFIMEKVKEHQKLLDVNNPRDFIDCFLIKMEQENNL 259
Query: 111 YYTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDES 170
+T +++ + L AG +T++ TL +++ L+ HPEV + E+ +G+
Sbjct: 260 EFTLESLVIAVSDLFGAGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHRSPCMQ 319
Query: 171 DLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPEL 230
D S++PY ++ E R P +PH + D Y +P+ T ++ + ++ D +
Sbjct: 320 DRSRMPYTDAVIHEIQRFIDLLPTNLPHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKA 379
Query: 231 WDEPTCFKPERF--ESSD-SEAHKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKR 287
+ P F P F ES + ++ MPF G+R C G LA+ + L L S+LQ F+ +
Sbjct: 380 FPNPKVFDPGHFLDESGNFKKSDYFMPFSAGKRMCVGEGLARMELFLFLTSILQNFKLQS 439
Query: 288 IGEDK-IDMT 296
+ E K +D+T
Sbjct: 440 LVEPKDLDIT 449
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 3/202 (1%)
Query: 94 MDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNA 153
+D + M +++Q +T +N+ L+ AG +T++ TL +A+ L+ HPEV
Sbjct: 247 IDCFLIKMEKEKQNQQSEFTIENLVITAADLLGAGTETTSTTLRYALLLLLKHPEVTAKV 306
Query: 154 RAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPR 213
+ E+ VG+ D +PY +V E R P +PH + D Y +P+
Sbjct: 307 QEEIERVVGRNRSPCMQDRGHMPYTDAVVHEVQRYIDLIPTSLPHAVTCDVKFRNYLIPK 366
Query: 214 DTTLLVNAWAIHRDPELWDEPTCFKPERFESSDSEAHK---LMPFGLGRRACPGASLAQR 270
TT+L + ++ D + + P F P F K MPF G+R C G LA+
Sbjct: 367 GTTILTSLTSVLHDNKEFPNPEMFDPRHFLDEGGNFKKSNYFMPFSAGKRICVGEGLARM 426
Query: 271 LVGLTLGSLLQCFEWKRIGEDK 292
+ L L +LQ F K + + K
Sbjct: 427 ELFLFLTFILQNFNLKSLIDPK 448
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 102/200 (51%), Gaps = 6/200 (3%)
Query: 108 QPQYYTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLI 167
Q + + + + A + L +A ++T+A +L W + NL +P+ + E+ + +
Sbjct: 275 QQDHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTP 334
Query: 168 DESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTV-GGYDVPRDTTLLVNAWAIHR 226
DL +PYL+ + E++RL P+ P R+ D TV G Y +P+ T L +N +
Sbjct: 335 RAEDLRNMPYLKACLKESMRLTPSVPFTT--RTLDKPTVLGEYALPKGTVLTLNTQVLGS 392
Query: 227 DPELWDEPTCFKPERFESSDSEAHKL--MPFGLGRRACPGASLAQRLVGLTLGSLLQCFE 284
+ +++ F+PER+ + + + +PFG+G+R C G LA+ + L L ++Q ++
Sbjct: 393 SEDNFEDSHKFRPERWLQKEKKINPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYD 452
Query: 285 WKRIGEDKIDMTEGRGITMP 304
+ ++M GI +P
Sbjct: 453 IVATDNEPVEMLH-LGILVP 471
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 116/235 (49%), Gaps = 10/235 (4%)
Query: 56 LNWI-GDFEKRILRLSKTMDTILQGLVDQHRNKKAGLESMDTMIDHMLSLQESQPQY-YT 113
++W+ +EK + K + ++ L+ + R + + E ++ +D L ++ + T
Sbjct: 237 ISWLYKKYEKSV----KDLKDAIEVLIAEKRRRISTEEKLEECMDFATELILAEKRGDLT 292
Query: 114 DQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLS 173
+N+ +L ++IA DT +++L + + + HP V + E+ +G+ I D+
Sbjct: 293 RENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERD-IKIDDIQ 351
Query: 174 KLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDE 233
KL + N + E++R P L++ ++ +D + GY V + T +++N +HR E + +
Sbjct: 352 KLKVMENFIYESMRYQPVVDLVM-RKALEDDVIDGYPVKKGTNIILNIGRMHR-LEFFPK 409
Query: 234 PTCFKPERFESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRI 288
P F E F + + PFG G R C G +A ++ L +LL+ F K +
Sbjct: 410 PNEFTLENF-AKNVPYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTL 463
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 130/291 (44%), Gaps = 16/291 (5%)
Query: 1 MFSELTFNITMRMIAGKRYYGDNVEDEEEARMFRDTVKEVLAVNETSNPGDFLPFLNWIG 60
F+ELT + + GK++ D+ + R + + + + +LP ++
Sbjct: 139 FFAELTIYTSSATLIGKKF-----RDQLDGRFAKLYHELERGTDPLAYVDPYLPIESFRR 193
Query: 61 DFEKRILRLSKTMDTILQGLVDQHRNKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKAL 120
E R ++ D I+ G + K+ + +D +I + + P++ D+ I +
Sbjct: 194 RDEARNGLVALVAD-IMNGRIANPPTDKSDRDMLDVLI--AVKAETGTPRFSADE-ITGM 249
Query: 121 MLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRN 180
++++ AG TS+ T W + L+ H + EL+ G + L ++P L N
Sbjct: 250 FISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLEN 309
Query: 181 IVSETLRLNPAAPLLIPHR-SSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKP 239
++ ETLRL+P PL+I R + + V G+ + + + +R PE + +P F P
Sbjct: 310 VLKETLRLHP--PLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVP 367
Query: 240 ERFESSDSE----AHKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWK 286
R+E E +PFG GR C GA+ A + LL+ +E++
Sbjct: 368 ARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFE 418
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 130/291 (44%), Gaps = 16/291 (5%)
Query: 1 MFSELTFNITMRMIAGKRYYGDNVEDEEEARMFRDTVKEVLAVNETSNPGDFLPFLNWIG 60
F+ELT + + GK++ D+ + R + + + + +LP ++
Sbjct: 139 FFAELTIYTSSACLIGKKF-----RDQLDGRFAKLYHELERGTDPLAYVDPYLPIESFRR 193
Query: 61 DFEKRILRLSKTMDTILQGLVDQHRNKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKAL 120
E R ++ D I+ G + K+ + +D +I + + P++ D+ I +
Sbjct: 194 RDEARNGLVALVAD-IMNGRIANPPTDKSDRDMLDVLI--AVKAETGTPRFSADE-ITGM 249
Query: 121 MLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRN 180
++++ AG TS+ T W + L+ H + EL+ G + L ++P L N
Sbjct: 250 FISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLEN 309
Query: 181 IVSETLRLNPAAPLLIPHR-SSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKP 239
++ ETLRL+P PL+I R + + V G+ + + + +R PE + +P F P
Sbjct: 310 VLKETLRLHP--PLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVP 367
Query: 240 ERFESSDSE----AHKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWK 286
R+E E +PFG GR C GA+ A + LL+ +E++
Sbjct: 368 ARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFE 418
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 130/291 (44%), Gaps = 16/291 (5%)
Query: 1 MFSELTFNITMRMIAGKRYYGDNVEDEEEARMFRDTVKEVLAVNETSNPGDFLPFLNWIG 60
F+ELT + + GK++ D+ + R + + + + +LP ++
Sbjct: 139 FFAELTIYTSSACLIGKKF-----RDQLDGRFAKLYHELERGTDPLAYVDPYLPIESFRR 193
Query: 61 DFEKRILRLSKTMDTILQGLVDQHRNKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKAL 120
E R ++ D I+ G + K+ + +D +I + + P++ D+ I +
Sbjct: 194 RDEARNGLVALVAD-IMNGRIANPPTDKSDRDMLDVLI--AVKAETGTPRFSADE-ITGM 249
Query: 121 MLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRN 180
++++ AG TS+ T W + L+ H + EL+ G + L ++P L N
Sbjct: 250 FISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLEN 309
Query: 181 IVSETLRLNPAAPLLIPHR-SSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKP 239
++ ETLRL+P PL+I R + + V G+ + + + +R PE + +P F P
Sbjct: 310 VLKETLRLHP--PLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVP 367
Query: 240 ERFESSDSE----AHKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWK 286
R+E E +PFG GR C GA+ A + LL+ +E++
Sbjct: 368 ARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFE 418
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 130/291 (44%), Gaps = 16/291 (5%)
Query: 1 MFSELTFNITMRMIAGKRYYGDNVEDEEEARMFRDTVKEVLAVNETSNPGDFLPFLNWIG 60
F+ELT + + GK++ D+ + R + + + + +LP ++
Sbjct: 139 FFAELTIYTSSACLIGKKF-----RDQLDGRFAKLYHELERGTDPLAYVDPYLPIESFRR 193
Query: 61 DFEKRILRLSKTMDTILQGLVDQHRNKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKAL 120
E R ++ D I+ G + K+ + +D +I + + P++ D+ I +
Sbjct: 194 RDEARNGLVALVAD-IMNGRIANPPTDKSDRDMLDVLI--AVKAETGTPRFSADE-ITGM 249
Query: 121 MLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRN 180
++++ AG TS+ T W + L+ H + EL+ G + L ++P L N
Sbjct: 250 FISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLEN 309
Query: 181 IVSETLRLNPAAPLLIPHR-SSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKP 239
++ ETLRL+P PL+I R + + V G+ + + + +R PE + +P F P
Sbjct: 310 VLKETLRLHP--PLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVP 367
Query: 240 ERFESSDSE----AHKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWK 286
R+E E +PFG GR C GA+ A + LL+ +E++
Sbjct: 368 ARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFE 418
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 95/181 (52%), Gaps = 7/181 (3%)
Query: 115 QNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAE-LNAQVGQECLIDESDLS 173
+++KA + ++ G++T+++TL+W + + V + R E LNA+ E I + L
Sbjct: 275 EDVKANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAEGDISKM-LQ 333
Query: 174 KLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDE 233
+P L+ + ETLRL+P + L + SD + Y +P T + V +A+ RDP +
Sbjct: 334 MVPLLKASIKETLRLHPISVTLQRYPESD-LVLQDYLIPAKTLVQVAIYAMGRDPAFFSS 392
Query: 234 PTCFKPERFESSDSE--AHKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCF--EWKRIG 289
P F P R+ S D + + + FG G R C G +A+ + L L +L+ F E + IG
Sbjct: 393 PDKFDPTRWLSKDKDLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILENFKVEMQHIG 452
Query: 290 E 290
+
Sbjct: 453 D 453
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 84/186 (45%), Gaps = 10/186 (5%)
Query: 117 IKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNA-QVGQECLIDESDLSKL 175
+K +L L+ AG +T L L H ++ + R E N Q+ QE + L K+
Sbjct: 244 LKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQE--LTAETLKKM 301
Query: 176 PYLRNIVSETLRLNPAAPLLIPHRS-SDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEP 234
PYL ++ E LRL P P+ R DC G+ P+ + H DP+L+ +P
Sbjct: 302 PYLDQVLQEVLRLIP--PVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDP 359
Query: 235 TCFKPERFESSDSEAHKL----MPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGE 290
F PERF S H +PFG G R C G A+ + L L+Q F+W +
Sbjct: 360 EKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPG 419
Query: 291 DKIDMT 296
+++
Sbjct: 420 QNLELV 425
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 89/171 (52%), Gaps = 3/171 (1%)
Query: 115 QNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSK 174
++IKA + ++ G+DT+++TL+W + + + +V RAE+ A Q + L
Sbjct: 274 EDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQL 333
Query: 175 LPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEP 234
+P L+ + ETLRL+P + + + +D + Y +P T + V +A+ R+P + +P
Sbjct: 334 VPLLKASIKETLRLHPIS-VTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDP 392
Query: 235 TCFKPERFESSDSEAHKL--MPFGLGRRACPGASLAQRLVGLTLGSLLQCF 283
F P R+ S D + FG G R C G +A+ + + L ++L+ F
Sbjct: 393 ENFDPTRWLSKDKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENF 443
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 89/171 (52%), Gaps = 3/171 (1%)
Query: 115 QNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSK 174
++IKA + ++ G+DT+++TL+W + + + +V RAE+ A Q + L
Sbjct: 271 EDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQL 330
Query: 175 LPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEP 234
+P L+ + ETLRL+P + + + +D + Y +P T + V +A+ R+P + +P
Sbjct: 331 VPLLKASIKETLRLHPIS-VTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDP 389
Query: 235 TCFKPERFESSDSEAHKL--MPFGLGRRACPGASLAQRLVGLTLGSLLQCF 283
F P R+ S D + FG G R C G +A+ + + L ++L+ F
Sbjct: 390 ENFDPTRWLSKDKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENF 440
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 93/195 (47%), Gaps = 23/195 (11%)
Query: 101 MLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQ 160
+L E + +D++I AL+L +++A + + TL + +L+N+PE + + A
Sbjct: 243 ILCTSEYEGMALSDKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLA----- 297
Query: 161 VGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVN 220
D S +P ++ETLR P L IP + S D VGG ++ +DT +
Sbjct: 298 ----------DRSLVP---RAIAETLRYKPPVQL-IPRQLSQDTVVGGMEIKKDTIVFCM 343
Query: 221 AWAIHRDPELWDEPTCFKPER----FESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTL 276
A +RDPE +++P F R +S+ S A + + FG G C G + A+ + +
Sbjct: 344 IGAANRDPEAFEQPDVFNIHREDLGIKSAFSGAARHLAFGSGIHNCVGTAFAKNEIEIVA 403
Query: 277 GSLLQCFEWKRIGED 291
+L R+ ED
Sbjct: 404 NIVLDKMRNIRLEED 418
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 92 ESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLK 151
ES+ +I + L ++ + + K ++ L + +T T W++ ++ +PE +K
Sbjct: 234 ESISELISLRMFLNDTLSTFDDLEKAKTHLVVLWASQANTIPATF-WSLFQMIRNPEAMK 292
Query: 152 NARAELNAQV----------GQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSS 201
A E+ + G + +++L+ LP L +I+ E+LRL+ A+ L +
Sbjct: 293 AATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSAS--LNIRTAK 350
Query: 202 DDCTV----GGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDSEA-------- 249
+D T+ G Y++ +D + + +H DPE++ +P FK +R+ + +
Sbjct: 351 EDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNG 410
Query: 250 ----HKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRI-GEDK---IDMTE-GRG 300
+ MPFG G CPG A + L +L FE + I G+ K +D + G G
Sbjct: 411 LKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSRAGLG 470
Query: 301 ITMP 304
I P
Sbjct: 471 ILPP 474
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 92 ESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLK 151
ES+ +I + L ++ + + K ++ L + +T T W++ ++ +PE +K
Sbjct: 234 ESISELISLRMFLNDTLSTFDDLEKAKTHLVVLWASQANTIPATF-WSLFQMIRNPEAMK 292
Query: 152 NARAELNAQV----------GQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSS 201
A E+ + G + +++L+ LP L +I+ E+LRL+ A+ L +
Sbjct: 293 AATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSAS--LNIRTAK 350
Query: 202 DDCTV----GGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDSEA-------- 249
+D T+ G Y++ +D + + +H DPE++ +P FK +R+ + +
Sbjct: 351 EDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNG 410
Query: 250 ----HKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRI-GEDK---IDMTE-GRG 300
+ MPFG G CPG A + L +L FE + I G+ K +D + G G
Sbjct: 411 LKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSRAGLG 470
Query: 301 ITMP 304
I P
Sbjct: 471 ILPP 474
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 96/230 (41%), Gaps = 10/230 (4%)
Query: 64 KRILRLSKTMDTILQGLVDQHRNKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKALMLT 123
+R R + + I + + R + E +D ++ +L + TD + +++
Sbjct: 203 RRRDRAHREIKDIFYKAIQKRRQSQ---EKIDDILQTLLDATYKDGRPLTDDEVAGMLIG 259
Query: 124 LIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQEC-LIDESDLSKLPYLRNIV 182
L++AG TS+ T W L + K E G+ + L L L +
Sbjct: 260 LLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCI 319
Query: 183 SETLRLNPAAPLLIPHR-SSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPER 241
ETLRL P P++I R + TV GY +P + V+ R + W E F P+R
Sbjct: 320 KETLRLRP--PIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDR 377
Query: 242 F---ESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRI 288
+ + E +PFG GR C G + A + ++L+ +E+ I
Sbjct: 378 YLQDNPASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLI 427
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 19/232 (8%)
Query: 69 LSKTMDTILQGLVDQHRNKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAG 128
L K + I+ ++ NK + S ++ +LS + + +++ + AG
Sbjct: 209 LQKILSEIIIARKEEEVNKDS---STSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAG 265
Query: 129 IDTSAITLEWAMANL-----VNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVS 183
TS+IT W+M +L V H E L+ E AQ+ ++DE +P+
Sbjct: 266 QHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERCAR 320
Query: 184 ETLRLNPAAPLLIPHRSS-DDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERF 242
E++R +P PLL+ R D VG Y VP+ + + H D E + EP + PER
Sbjct: 321 ESIRRDP--PLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERD 378
Query: 243 ESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKID 294
E + + FG G C G V L + + ++++ + ++ D
Sbjct: 379 EKVEG---AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPD 427
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 19/232 (8%)
Query: 69 LSKTMDTILQGLVDQHRNKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAG 128
L K + I+ ++ NK + S ++ +LS + + +++ + AG
Sbjct: 222 LQKILSEIIIARKEEEVNKDS---STSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAG 278
Query: 129 IDTSAITLEWAMANL-----VNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVS 183
TS+IT W+M +L V H E L+ E AQ+ ++DE +P+
Sbjct: 279 QHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERCAR 333
Query: 184 ETLRLNPAAPLLIPHRSS-DDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERF 242
E++R +P PLL+ R D VG Y VP+ + + H D E + EP + PER
Sbjct: 334 ESIRRDP--PLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERD 391
Query: 243 ESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKID 294
E + + FG G C G V L + + ++++ + ++ D
Sbjct: 392 EKVEG---AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPD 440
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 19/232 (8%)
Query: 69 LSKTMDTILQGLVDQHRNKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAG 128
L K + I+ ++ NK + S ++ +LS + + +++ + AG
Sbjct: 210 LQKILSEIIIARKEEEVNKDS---STSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAG 266
Query: 129 IDTSAITLEWAMANL-----VNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVS 183
TS+IT W+M +L V H E L+ E AQ+ ++DE +P+
Sbjct: 267 QHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERCAR 321
Query: 184 ETLRLNPAAPLLIPHRSS-DDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERF 242
E++R +P PLL+ R D VG Y VP+ + + H D E + EP + PER
Sbjct: 322 ESIRRDP--PLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERD 379
Query: 243 ESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKID 294
E + + FG G C G V L + + ++++ + ++ D
Sbjct: 380 EKVEG---AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPD 428
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 18/174 (10%)
Query: 107 SQPQYYTD-------------QNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNA 153
++PQ+YT + IKA + L +DT+A L + L +P+V +
Sbjct: 255 NRPQHYTGIVAELLLKAELSLEAIKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQIL 314
Query: 154 RAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPR 213
R E A + ++LP LR + ETLRL P L + S D + Y +P
Sbjct: 315 RQESLAAAASISEHPQKATTELPLLRAALKETLRLYPVG-LFLERVVSSDLVLQNYHIPA 373
Query: 214 DTTLLVNAWAIHRDPELWDEPTCFKPERF---ESSDSEAHKLMPFGLGRRACPG 264
T + V +++ R+ L+ P + P+R+ S H +PFG G R C G
Sbjct: 374 GTLVQVFLYSLGRNAALFPRPERYNPQRWLDIRGSGRNFHH-VPFGFGMRQCLG 426
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 19/232 (8%)
Query: 69 LSKTMDTILQGLVDQHRNKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAG 128
L K + I+ ++ NK + S ++ +LS + + +++ + AG
Sbjct: 209 LQKILSEIIIARKEEEVNKDS---STSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAG 265
Query: 129 IDTSAITLEWAMANL-----VNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVS 183
TS+IT W+M +L V H E L+ E AQ+ ++DE +P+
Sbjct: 266 QHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERCAR 320
Query: 184 ETLRLNPAAPLLIPHRSS-DDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERF 242
E++R +P PLL+ R D VG Y VP+ + + H D E + EP + PER
Sbjct: 321 ESIRRDP--PLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERD 378
Query: 243 ESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKID 294
E + + FG G C G V L + + ++++ + ++ D
Sbjct: 379 EKVEG---AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPD 427
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 19/232 (8%)
Query: 69 LSKTMDTILQGLVDQHRNKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAG 128
L K + I+ ++ NK + S ++ +LS + + +++ + AG
Sbjct: 208 LQKILSEIIIARKEEEVNKDS---STSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAG 264
Query: 129 IDTSAITLEWAMANL-----VNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVS 183
TS+IT W+M +L V H E L+ E AQ+ ++DE +P+
Sbjct: 265 QHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERCAR 319
Query: 184 ETLRLNPAAPLLIPHRSS-DDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERF 242
E++R +P PLL+ R D VG Y VP+ + + H D E + EP + PER
Sbjct: 320 ESIRRDP--PLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERD 377
Query: 243 ESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKID 294
E + + FG G C G V L + + ++++ + ++ D
Sbjct: 378 EKVEG---AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPD 426
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 16/186 (8%)
Query: 115 QNIKALMLTLIIAGIDTSAITLEWAMANL-----VNHPEVLKNARAELNAQVGQECLIDE 169
+ +++ + AG TS+IT W+M +L V H E L+ E AQ+ ++DE
Sbjct: 265 HEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE 324
Query: 170 SDLSKLPYLRNIVSETLRLNPAAPLLIPHRSS-DDCTVGGYDVPRDTTLLVNAWAIHRDP 228
+P+ E++R +P PLL+ R D VG Y VP+ + + H D
Sbjct: 325 -----MPFAERCARESIRRDP--PLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDE 377
Query: 229 ELWDEPTCFKPERFESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRI 288
E + EP + PER E + + FG G C G V L + + ++++ +
Sbjct: 378 EAFPEPRRWDPERDEKVEG---AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLL 434
Query: 289 GEDKID 294
++ D
Sbjct: 435 RDEVPD 440
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 18/187 (9%)
Query: 115 QNIKALMLTLIIAGIDTSAITLEWAMANLVNHP------EVLKNARAELNAQVGQECLID 168
+ +++ + AG TS IT W+M +L+ HP + L E AQ+ + ++D
Sbjct: 250 HEVCGMIVAAMFAGQHTSTITTSWSMLHLM-HPKNKKWLDKLHKEIDEFPAQLNYDNVMD 308
Query: 169 ESDLSKLPYLRNIVSETLRLNPAAPLLIPHR-SSDDCTVGGYDVPRDTTLLVNAWAIHRD 227
E +P+ V E++R +P PLL+ R + VG Y VP+ + + H D
Sbjct: 309 E-----MPFAERCVRESIRRDP--PLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHD 361
Query: 228 PELWDEPTCFKPERFESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKR 287
E + P + PER E D + FG G C G A V L + + ++++
Sbjct: 362 EEAFPNPRLWDPERDEKVDG---AFIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQL 418
Query: 288 IGEDKID 294
+ ++ D
Sbjct: 419 LRDEVPD 425
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 18/187 (9%)
Query: 115 QNIKALMLTLIIAGIDTSAITLEWAMANLVNHP------EVLKNARAELNAQVGQECLID 168
+ +++ + AG TS IT W+M +L+ HP + L E AQ+ + ++D
Sbjct: 256 HEVCGMIVAAMFAGQHTSTITTSWSMLHLM-HPKNKKWLDKLHKEIDEFPAQLNYDNVMD 314
Query: 169 ESDLSKLPYLRNIVSETLRLNPAAPLLIPHR-SSDDCTVGGYDVPRDTTLLVNAWAIHRD 227
E +P+ V E++R +P PLL+ R + VG Y VP+ + + H D
Sbjct: 315 E-----MPFAERCVRESIRRDP--PLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHD 367
Query: 228 PELWDEPTCFKPERFESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKR 287
E + P + PER E D + FG G C G A V L + + ++++
Sbjct: 368 EEAFPNPRLWDPERDEKVDG---AFIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQL 424
Query: 288 IGEDKID 294
+ ++ D
Sbjct: 425 LRDEVPD 431
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 18/187 (9%)
Query: 115 QNIKALMLTLIIAGIDTSAITLEWAMANLVNHP------EVLKNARAELNAQVGQECLID 168
+ +++ + AG TS IT W+M +L+ HP + L E AQ+ + ++D
Sbjct: 265 HEVCGMIVAAMFAGQHTSTITTSWSMLHLM-HPKNKKWLDKLHKEIDEFPAQLNYDNVMD 323
Query: 169 ESDLSKLPYLRNIVSETLRLNPAAPLLIPHR-SSDDCTVGGYDVPRDTTLLVNAWAIHRD 227
E +P+ V E++R +P PLL+ R + VG Y VP+ + + H D
Sbjct: 324 E-----MPFAERCVRESIRRDP--PLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHD 376
Query: 228 PELWDEPTCFKPERFESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKR 287
E + P + PER E D + FG G C G A V L + + ++++
Sbjct: 377 EEAFPNPRLWDPERDEKVDG---AFIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQL 433
Query: 288 IGEDKID 294
+ ++ D
Sbjct: 434 LRDEVPD 440
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 30/224 (13%)
Query: 80 LVDQHRNKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITLEWA 139
LV++ R E D ++ ++S+Q+ + + ++ L L++AG + S +
Sbjct: 198 LVERRRT-----EPGDDLLSALISVQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIG 252
Query: 140 MANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHR 199
L+ HP+ L RA D S LP N V E LR A P
Sbjct: 253 TYLLLTHPDQLALVRA---------------DPSALP---NAVEEILRYI-APPETTTRF 293
Query: 200 SSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDSEAHKLMPFGLGR 259
++++ +GG +P+ +T+LV A +RDP + +P F R D+ H + FG G
Sbjct: 294 AAEEVEIGGVAIPQYSTVLVANGAANRDPSQFPDPHRFDVTR----DTRGH--LSFGQGI 347
Query: 260 RACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITM 303
C G LA+ + L +L F +G D D+ R + +
Sbjct: 348 HFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVWRRSLLL 391
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 31/212 (14%)
Query: 77 LQGLVDQHRNKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITL 136
L+ L+D+ R + ++ +++++ES Q D+ I L L+IAG +T+
Sbjct: 212 LRALIDERRRTPG-----EDLMSGLVAVEESGDQLTEDEIIATCNL-LLIAGHETT---- 261
Query: 137 EWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLI 196
VN ++ NA + GQ + +D S+ ++ ET+R +P L+
Sbjct: 262 -------VN---LIANAALAMLRTPGQWAAL-AADGSRA---SAVIEETMRYDPPV-QLV 306
Query: 197 PHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDSEAHKLMPFG 256
+ DD T+G + VP+ T+L+ A HRDP + P F P+R + + + FG
Sbjct: 307 SRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDRAQI------RHLGFG 360
Query: 257 LGRRACPGASLAQRLVGLTLGSLLQCFEWKRI 288
G C GA LA+ + L +L F R+
Sbjct: 361 KGAHFCLGAPLARLEATVALPALAARFPEARL 392
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 22/173 (12%)
Query: 111 YYTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDES 170
+ TD I + + ++ AG +T+ + A+ NL HPE Q L+
Sbjct: 226 HLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPE--------------QRALV--- 268
Query: 171 DLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPEL 230
LS +V ETLR + ++ +++D VG +P L+V+ A+ RD E
Sbjct: 269 -LSGEAEWSAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRD-ER 326
Query: 231 WDEPTCFKPERFESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCF 283
PT +RF+ + + ++ + FG G CPGA+L++ G+ L +L F
Sbjct: 327 AHGPTA---DRFDLTRTSGNRHISFGHGPHVCPGAALSRMEAGVALPALYARF 376
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 30/224 (13%)
Query: 80 LVDQHRNKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITLEWA 139
LV++ R E D ++ ++ +Q+ + + ++ L L++AG +TS +
Sbjct: 199 LVERRRT-----EPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFETSVSLIGIG 253
Query: 140 MANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHR 199
L+ HP+ L R D S LP N V E LR A P
Sbjct: 254 TYLLLTHPDQLALVR---------------RDPSALP---NAVEEILRYI-APPETTTRF 294
Query: 200 SSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDSEAHKLMPFGLGR 259
++++ +GG +P+ +T+LV A +RDP+ + +P F R D+ H + FG G
Sbjct: 295 AAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR----DTRGH--LSFGQGI 348
Query: 260 RACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITM 303
C G LA+ + L +L F +G D D+ R + +
Sbjct: 349 HFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVWRRSLLL 392
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 97/224 (43%), Gaps = 30/224 (13%)
Query: 80 LVDQHRNKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITLEWA 139
LV++ R E D ++ ++ +Q+ + + ++ L L++AG ++S +
Sbjct: 199 LVERRRT-----EPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFESSVSLIGIG 253
Query: 140 MANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHR 199
L+ HP+ L R D S LP N V E LR A P
Sbjct: 254 TYLLLTHPDQLALVR---------------RDPSALP---NAVEEILRYI-APPETTTRF 294
Query: 200 SSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDSEAHKLMPFGLGR 259
++++ +GG +P+ +T+LV A +RDP+ + +P F R D+ H + FG G
Sbjct: 295 AAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR----DTRGH--LSFGQGI 348
Query: 260 RACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITM 303
C G LA+ + L +L F +G D D+ R + +
Sbjct: 349 HFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVWRRSLLL 392
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 97/224 (43%), Gaps = 30/224 (13%)
Query: 80 LVDQHRNKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITLEWA 139
LV++ R E D ++ ++ +Q+ + + ++ L L++AG ++S +
Sbjct: 198 LVERRRT-----EPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFESSVSLIGIG 252
Query: 140 MANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHR 199
L+ HP+ L R D S LP N V E LR A P
Sbjct: 253 TYLLLTHPDQLALVR---------------RDPSALP---NAVEEILRYI-APPETTTRF 293
Query: 200 SSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDSEAHKLMPFGLGR 259
++++ +GG +P+ +T+LV A +RDP+ + +P F R D+ H + FG G
Sbjct: 294 AAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR----DTRGH--LSFGQGI 347
Query: 260 RACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITM 303
C G LA+ + L +L F +G D D+ R + +
Sbjct: 348 HFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVWRRSLLL 391
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 30/224 (13%)
Query: 80 LVDQHRNKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITLEWA 139
LV++ R E D ++ ++ +Q+ + + ++ L L++AG + S +
Sbjct: 198 LVERRRT-----EPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIG 252
Query: 140 MANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHR 199
L+ HP+ L R D S LP N V E LR A P
Sbjct: 253 TYLLLTHPDQLALVR---------------RDPSALP---NAVEEILRYI-APPETTTRF 293
Query: 200 SSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDSEAHKLMPFGLGR 259
++++ +GG +P+ +T+LV A +RDP+ + +P F R D+ H + FG G
Sbjct: 294 AAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR----DTRGH--LSFGQGI 347
Query: 260 RACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITM 303
C G LA+ + L +L F +G D D+ R + +
Sbjct: 348 HFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVWRRSLLL 391
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 30/224 (13%)
Query: 80 LVDQHRNKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITLEWA 139
LV++ R E D ++ ++ +Q+ + + ++ L L++AG + S +
Sbjct: 199 LVERRRT-----EPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIG 253
Query: 140 MANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHR 199
L+ HP+ L R D S LP N V E LR A P
Sbjct: 254 TYLLLTHPDQLALVR---------------RDPSALP---NAVEEILRYI-APPETTTRF 294
Query: 200 SSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDSEAHKLMPFGLGR 259
++++ +GG +P+ +T+LV A +RDP+ + +P F R D+ H + FG G
Sbjct: 295 AAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR----DTRGH--LSFGQGI 348
Query: 260 RACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMTEGRGITM 303
C G LA+ + L +L F +G D D+ R + +
Sbjct: 349 HFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVWRRSLLL 392
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 38/188 (20%)
Query: 114 DQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLS 173
D+ IK +ML LII G +T+ + + + +P+++ +A L + G
Sbjct: 176 DEKIKYIML-LIIGGNETTTNLIGNMIRVIDENPDIIDDA---LKNRSG----------- 220
Query: 174 KLPYLRNIVSETLRLNPAAPL-LIPHR-SSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW 231
V ETLR +P+ +PHR +++D + + + ++V + +RD +
Sbjct: 221 -------FVEETLRY--YSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFF 271
Query: 232 DEPTCFKPERFESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGED 291
DEP FK R E H + FG+G C GA LA+ + L +L F KRI
Sbjct: 272 DEPDLFKIGR-----REMH--LAFGIGIHMCLGAPLARLEASIALNDILNHF--KRI--- 319
Query: 292 KIDMTEGR 299
KID + R
Sbjct: 320 KIDYKKSR 327
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 90/219 (41%), Gaps = 29/219 (13%)
Query: 75 TILQGLVDQHRNKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAI 134
+L G++D+ R ++ + ML E+ + + + AL+ +I AG DT+
Sbjct: 207 ALLHGVLDERRRN-----PLENDVLTMLLQAEADGSRLSTKELVALVGAIIAAGTDTTIY 261
Query: 135 TLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPL 194
+ +A+ NL+ PE L+ +AE +RN + E LR + +
Sbjct: 262 LIAFAVLNLLRSPEALELVKAEPG------------------LMRNALDEVLRFDNILRI 303
Query: 195 LIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDSEAHKLMP 254
+ D G + + + + + RD ++ P F R S+ +
Sbjct: 304 GTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRDTSAS------LA 357
Query: 255 FGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKI 293
+G G CPG SLA+ + +G++ + F ++ E +
Sbjct: 358 YGRGPHVCPGVSLARLEAEIAVGTIFRRFPEMKLKETPV 396
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 69/174 (39%), Gaps = 23/174 (13%)
Query: 112 YTDQNIKALMLTLIIAGIDTSAITLEW-------------AMANLVN--HPEVLKNARAE 156
+ + I+ + I +G T+A + W A LVN P V
Sbjct: 192 WAKRIIEGIRAGSIGSGSGTAAYAIAWHRDRHDDLLSPHVAAVELVNVLRPTVAIAVYIT 251
Query: 157 LNAQVGQECLIDESDLSKLP-YLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDT 215
A Q C + L + P Y V E R P P ++ R+S D G P
Sbjct: 252 FVAHALQTCSGIRAALVQQPDYAELFVQEVRRFYPFGPAVVA-RASQDFEWEGMAFPEGR 310
Query: 216 TLLVNAWAIHRDPELWDEPTCFKPERFESSDSEAHKLMPFG-----LGRRACPG 264
++++ + + D W +P F+PERF + D ++ +P G LG R CPG
Sbjct: 311 QVVLDLYGSNHDAATWADPQEFRPERFRAWDEDSFNFIPQGGGDHYLGHR-CPG 363
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 89/219 (40%), Gaps = 29/219 (13%)
Query: 75 TILQGLVDQHRNKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAI 134
+L G++D+ R ++ + ML E+ + + + AL+ +I AG DT+
Sbjct: 207 ALLHGVLDERRRN-----PLENDVLTMLLQAEADGSRLSTKELVALVGAIIAAGTDTTIY 261
Query: 135 TLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPL 194
+ +A+ NL+ PE L+ +AE +RN + E LR +
Sbjct: 262 LIAFAVLNLLRSPEALELVKAEPG------------------LMRNALDEVLRFENILRI 303
Query: 195 LIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDSEAHKLMP 254
+ D G + + + + + RD ++ P F R S+ +
Sbjct: 304 GTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRDTSAS------LA 357
Query: 255 FGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKI 293
+G G CPG SLA+ + +G++ + F ++ E +
Sbjct: 358 YGRGPHVCPGVSLARLEAEIAVGTIFRRFPEMKLKETPV 396
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 69/174 (39%), Gaps = 23/174 (13%)
Query: 112 YTDQNIKALMLTLIIAGIDTSAITLEW-------------AMANLVN--HPEVLKNARAE 156
+ + I+ + I +G T+A + W A LVN P V
Sbjct: 184 WAKRIIEGIRAGSIGSGSGTAAYAIAWHRDRHDDLLSPHVAAVELVNVLRPTVAIAVYIT 243
Query: 157 LNAQVGQECLIDESDLSKLP-YLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDT 215
A Q C + L + P Y V E R P P ++ R+S D G P
Sbjct: 244 FVAHALQTCSGIRAALVQQPDYAELFVQEVRRFYPFFPAVVA-RASQDFEWEGMAFPEGR 302
Query: 216 TLLVNAWAIHRDPELWDEPTCFKPERFESSDSEAHKLMPFG-----LGRRACPG 264
++++ + + D W +P F+PERF + D ++ +P G LG R CPG
Sbjct: 303 QVVLDLYGSNHDAATWADPQEFRPERFRAWDEDSFNFIPQGGGDHYLGHR-CPG 355
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 69/174 (39%), Gaps = 23/174 (13%)
Query: 112 YTDQNIKALMLTLIIAGIDTSAITLEW-------------AMANLVN--HPEVLKNARAE 156
+ + I+ + I +G T+A + W A LVN P V
Sbjct: 192 WAKRIIEGIRAGSIGSGSGTAAYAIAWHRDRHDDLLSPHVAAVELVNVLRPTVAIAVYIT 251
Query: 157 LNAQVGQECLIDESDLSKLP-YLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDT 215
A Q C + L + P Y V E R P P ++ R+S D G P
Sbjct: 252 FVAHALQTCSGIRAALVQQPDYAELFVQEVRRFYPFFPAVVA-RASQDFEWEGMAFPEGR 310
Query: 216 TLLVNAWAIHRDPELWDEPTCFKPERFESSDSEAHKLMPFG-----LGRRACPG 264
++++ + + D W +P F+PERF + D ++ +P G LG R CPG
Sbjct: 311 QVVLDLYGSNHDAATWADPQEFRPERFRAWDEDSFNFIPQGGGDHYLGHR-CPG 363
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 23/156 (14%)
Query: 114 DQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLS 173
D ++ L+ T+++AG +T+ L AM + HP+ + + + N ++ +
Sbjct: 230 DYELRTLVATVLVAGYETTNHQLALAMYDFAQHPD--QWMKIKENPELAPQA-------- 279
Query: 174 KLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDE 233
V E LR +P P+ +++D V G +P T + + A HRDP ++ +
Sbjct: 280 --------VEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFAD 331
Query: 234 PTCFKPERFESSDSEAHKLMPFGLGRRACPGASLAQ 269
+RF+ + + FG G C G +LA+
Sbjct: 332 -----ADRFDITVKREAPSIAFGGGPHFCLGTALAR 362
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 69/174 (39%), Gaps = 23/174 (13%)
Query: 112 YTDQNIKALMLTLIIAGIDTSAITLEW-------------AMANLVN--HPEVLKNARAE 156
+ + I+ + I +G T+A + W A LVN P V
Sbjct: 184 WAKRIIEGIRAGSIGSGSGTAAYAIAWHRDRHDDLLSPHVAAVELVNVLEPTVAIAVYIT 243
Query: 157 LNAQVGQECLIDESDLSKLP-YLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDT 215
A Q C + L + P Y V E R P P ++ R+S D G P
Sbjct: 244 FVAHALQTCSGIRAALVQQPDYAELFVQEVRRFYPFFPAVVA-RASQDFEWEGMAFPEGR 302
Query: 216 TLLVNAWAIHRDPELWDEPTCFKPERFESSDSEAHKLMPFG-----LGRRACPG 264
++++ + + D W +P F+PERF + D ++ +P G LG R CPG
Sbjct: 303 QVVLDLYGSNHDAATWADPQEFRPERFRAWDEDSFNFIPQGGGDHYLGHR-CPG 355
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 69/174 (39%), Gaps = 23/174 (13%)
Query: 112 YTDQNIKALMLTLIIAGIDTSAITLEW-------------AMANLVN--HPEVLKNARAE 156
+ + I+ + I +G T+A + W A LVN P V
Sbjct: 192 WAKRIIEGIRAGSIGSGSGTAAYAIAWHRDRHDDLLSPHVAAVELVNVLRPTVAIAVYIT 251
Query: 157 LNAQVGQECLIDESDLSKLP-YLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDT 215
A Q C + L + P Y V E R P P ++ R+S D G P
Sbjct: 252 FVAHALQTCSGIRAALVQQPDYAELFVQEVRRFYPFFPAVVA-RASQDFEWEGMAFPEGR 310
Query: 216 TLLVNAWAIHRDPELWDEPTCFKPERFESSDSEAHKLMPFG-----LGRRACPG 264
++++ + + D W +P F+PERF + D ++ +P G LG R CPG
Sbjct: 311 QVVLDLYGSNHDAATWADPQEFRPERFRAWDEDSFNFIPQGGGDHYLGHR-CPG 363
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 85/196 (43%), Gaps = 24/196 (12%)
Query: 114 DQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLS 173
D ++ L+ T+++AG +T+ L AM + HP+ + + + N ++ +
Sbjct: 240 DYELRTLVATVLVAGYETTNHQLALAMYDFAQHPD--QWMKIKENPELAPQA-------- 289
Query: 174 KLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDE 233
V E LR +P P+ +++D V G +P T + + A HRDP ++ +
Sbjct: 290 --------VEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFAD 341
Query: 234 PTCFKPERFESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKI 293
+RF+ + + FG G C G +LA+ + + +L + +I +I
Sbjct: 342 -----ADRFDITVKREAPSIAFGGGPHFCLGTALARLELTEAVAALATRLDPPQIA-GEI 395
Query: 294 DMTEGRGITMPKAVAL 309
G+ P A+ L
Sbjct: 396 TWRHELGVAGPDALPL 411
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 6/130 (4%)
Query: 181 IVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPE 240
V E R P P L D + + T++L++ + + DP LWD P F+PE
Sbjct: 279 FVQEVRRYYPFGPFLGA-LVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPE 337
Query: 241 RFESSDSEAHKLMPFGLGR----RACPGASLAQRLVGLTLGSLLQCFEWKRIGEDKIDMT 296
RF + ++P G G CPG + ++ +L L+ E+ + E + +
Sbjct: 338 RFAEREENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYD-VPEQSLHYS 396
Query: 297 EGRGITMPKA 306
R ++P++
Sbjct: 397 LARMPSLPES 406
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 69/174 (39%), Gaps = 23/174 (13%)
Query: 112 YTDQNIKALMLTLIIAGIDTSAITLEW-------------AMANLVN--HPEVLKNARAE 156
+ + I+ + I +G T+A + W A LVN P V
Sbjct: 184 WAKRIIEGIRAGSIGSGSGTAAYAIAWHRDRHDDLLSPHVAAVELVNVLRPTVEIAVYIT 243
Query: 157 LNAQVGQECLIDESDLSKLP-YLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDT 215
A Q C + L + P Y V E R P P ++ R+S D G P
Sbjct: 244 FVAHALQTCSGIRAALVQQPDYAELFVQEVRRFYPFFPAVVA-RASQDFEWEGMAFPEGR 302
Query: 216 TLLVNAWAIHRDPELWDEPTCFKPERFESSDSEAHKLMPFG-----LGRRACPG 264
++++ + + D W +P F+PERF + D ++ +P G LG R CPG
Sbjct: 303 QVVLDLYGSNHDAATWADPQEFRPERFRAWDEDSFNFIPQGGGDHYLGHR-CPG 355
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 80/185 (43%), Gaps = 24/185 (12%)
Query: 118 KALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPY 177
+A++L L + + W M L+ HPE L+ R E+ Q G+ ++E P
Sbjct: 256 RAMLLQLWVTQGNAGPAAF-WVMGYLLTHPEALRAVREEI--QGGKHLRLEERQ-KNTPV 311
Query: 178 LRNIVSETLRLNPAAPLLIPHRSSDD---CTVGG--YDVPRDTTLLVNAW-AIHRDPELW 231
+++ ETLRL AA LI + D C G Y + R L V + + DP++
Sbjct: 312 FDSVLWETLRLTAAA--LITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIH 369
Query: 232 DEPTCFKPERFESSDSEAHK------------LMPFGLGRRACPGASLAQRLVGLTLGSL 279
+P F+ +RF ++D K +P+G CPG A + + ++
Sbjct: 370 QQPEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTI 429
Query: 280 LQCFE 284
L F+
Sbjct: 430 LTRFD 434
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 78/182 (42%), Gaps = 13/182 (7%)
Query: 113 TDQNIKALMLTLIIAGIDTSAITLEWAMANLVN-----HPEVLKNARAELNAQVGQECLI 167
+ + +++ + AG TS IT W++ +L++ H L E AQ+ + ++
Sbjct: 249 SQHEVCGMIVAAMFAGQHTSTITTTWSLLHLMDPRNKRHLAKLHQEIDEFPAQLNYDNVM 308
Query: 168 DESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRD 227
+E +P+ E++R +P +L+ + VG Y VP + + H+D
Sbjct: 309 EE-----MPFAEQCARESIRRDPPLVMLM-RKVLKPVQVGKYVVPEGDIIACSPLLSHQD 362
Query: 228 PELWDEPTCFKPERFESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKR 287
E + P + PER A FG G C G V L ++L+ ++++
Sbjct: 363 EEAFPNPREWNPERNMKLVDGA--FCGFGAGVHKCIGEKFGLLQVKTVLATVLRDYDFEL 420
Query: 288 IG 289
+G
Sbjct: 421 LG 422
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 65/155 (41%), Gaps = 25/155 (16%)
Query: 138 WAMANLVNHPEVLKNARAELNA-------QVGQECLIDESDLSKLPYLRNIVSETLRLNP 190
W + L+ +PE L R EL + V Q + + L P L +++SE+LRL
Sbjct: 284 WLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLT- 342
Query: 191 AAPLLIPHRSSDDCTVGG----YDVPR-DTTLLVNAWAIHRDPELWDEPTCFKPERFESS 245
AAP + D +++ R D LL + RDPE++ +P FK RF +
Sbjct: 343 AAPFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNP 402
Query: 246 DSEAHK------------LMPFGLGRRACPGASLA 268
D K MP+G G C G S A
Sbjct: 403 DGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYA 437
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 65/155 (41%), Gaps = 25/155 (16%)
Query: 138 WAMANLVNHPEVLKNARAELNA-------QVGQECLIDESDLSKLPYLRNIVSETLRLNP 190
W + L+ +PE L R EL + V Q + + L P L +++SE+LRL
Sbjct: 272 WLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLT- 330
Query: 191 AAPLLIPHRSSDDCTVGG----YDVPR-DTTLLVNAWAIHRDPELWDEPTCFKPERFESS 245
AAP + D +++ R D LL + RDPE++ +P FK RF +
Sbjct: 331 AAPFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNP 390
Query: 246 DSEAHK------------LMPFGLGRRACPGASLA 268
D K MP+G G C G S A
Sbjct: 391 DGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYA 425
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 31/206 (15%)
Query: 75 TILQGLVDQHRNKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAI 134
T L GLV + K+A E D ++D +++ Q + D+ + + L L++AG +T+
Sbjct: 197 TYLHGLVGR---KQA--EPEDGLLDELIARQLEEGDLDHDE-VVMIALVLLVAGHETTVN 250
Query: 135 TLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPL 194
+ L+ HPE + + A G +V E LR +
Sbjct: 251 AIALGALTLIQHPEQIDVLLRDPGAVSG------------------VVEELLRFTSVSDH 292
Query: 195 LIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDSEAHKLMP 254
++ + +D VGG + +LV+ ++RD + ++ P F R A +
Sbjct: 293 IV-RMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARR------NARHHVG 345
Query: 255 FGLGRRACPGASLAQRLVGLTLGSLL 280
FG G C G +LA+ + + LG L
Sbjct: 346 FGHGIHQCLGQNLARAELEIALGGLF 371
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 63/148 (42%), Gaps = 22/148 (14%)
Query: 122 LTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNI 181
+TL++AG +T A L W+ L + P+ K A +
Sbjct: 216 VTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL------------------AA 257
Query: 182 VSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPER 241
E LRL P A +L R +G +P+ TTL+++ + R + E F+PER
Sbjct: 258 FQEALRLYPPAWILT-RRLERPLLLGEDRLPQGTTLVLSPYVTQRL--YFPEGEAFQPER 314
Query: 242 F-ESSDSEAHKLMPFGLGRRACPGASLA 268
F + + + PFGLG+R C G A
Sbjct: 315 FLAERGTPSGRYFPFGLGQRLCLGRDFA 342
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 63/148 (42%), Gaps = 22/148 (14%)
Query: 122 LTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNI 181
+TL++AG +T A L W+ L + P+ K A +
Sbjct: 216 VTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL------------------AA 257
Query: 182 VSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPER 241
E LRL P A +L R +G +P TTL+++ + R + + F+PER
Sbjct: 258 FQEALRLYPPAWILT-RRLERPLLLGEDRLPPGTTLVLSPYVTQR--LHFPDGEAFRPER 314
Query: 242 F-ESSDSEAHKLMPFGLGRRACPGASLA 268
F E + + + PFGLG+R C G A
Sbjct: 315 FLEERGTPSGRYFPFGLGQRLCLGRDFA 342
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 29/209 (13%)
Query: 73 MDTILQGLVDQHRNKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTS 132
M L L+D R + + ++ ++ + T + + + L++AG +T+
Sbjct: 214 MSGYLSRLIDSKRGQDG-----EDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETT 268
Query: 133 AITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAA 192
+ M L++HP+ L RA++ L+D + L Y + S T R P
Sbjct: 269 VNLIANGMYALLSHPDQLAALRADMT-------LLDGAVEEMLRYEGPVESATYRF-PVE 320
Query: 193 PLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDSEAHKL 252
P+ + D TV +P T+LV HR PE + +P F R D+ H
Sbjct: 321 PVDL------DGTV----IPAGDTVLVVLADAHRTPERFPDPHRFDIRR----DTAGH-- 364
Query: 253 MPFGLGRRACPGASLAQRLVGLTLGSLLQ 281
+ FG G C GA LA+ + + +LL+
Sbjct: 365 LAFGHGIHFCIGAPLARLEARIAVRALLE 393
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 29/209 (13%)
Query: 73 MDTILQGLVDQHRNKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTS 132
M L L+D R + + ++ ++ + T + + + L++AG +T+
Sbjct: 214 MSGYLSRLIDSKRGQDG-----EDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETT 268
Query: 133 AITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAA 192
+ M L++HP+ L RA++ L+D + L Y + S T R P
Sbjct: 269 VNLIANGMYALLSHPDQLAALRADM-------TLLDGAVEEMLRYEGPVESATYRF-PVE 320
Query: 193 PLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDSEAHKL 252
P+ + D TV +P T+LV HR PE + +P F R D+ H
Sbjct: 321 PVDL------DGTV----IPAGDTVLVVLADAHRTPERFPDPHRFDIRR----DTAGH-- 364
Query: 253 MPFGLGRRACPGASLAQRLVGLTLGSLLQ 281
+ FG G C GA LA+ + + +LL+
Sbjct: 365 LAFGHGIHFCIGAPLARLEARIAVRALLE 393
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 29/209 (13%)
Query: 73 MDTILQGLVDQHRNKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTS 132
M L L+D R + + ++ ++ + T + + + L++AG +T+
Sbjct: 214 MSGYLSRLIDSKRGQDG-----EDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETT 268
Query: 133 AITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAA 192
+ M L++HP+ L RA++ L+D + L Y + S T R P
Sbjct: 269 VNLIANGMYALLSHPDQLAALRADM-------TLLDGAVEEMLRYEGPVESATYRF-PVE 320
Query: 193 PLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDSEAHKL 252
P+ + D TV +P T+LV HR PE + +P F R D+ H
Sbjct: 321 PVDL------DGTV----IPAGDTVLVVLADAHRTPERFPDPHRFDIRR----DTAGH-- 364
Query: 253 MPFGLGRRACPGASLAQRLVGLTLGSLLQ 281
+ FG G C GA LA+ + + +LL+
Sbjct: 365 LAFGHGIHFCIGAPLARLEARIAVRALLE 393
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 72/171 (42%), Gaps = 29/171 (16%)
Query: 102 LSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQV 161
L L E + D+ L++AG T+ + L + L HP +A AE
Sbjct: 236 LVLAEVDGRALDDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHP-AHWDAAAE----- 289
Query: 162 GQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCT-VGGYDVPRDTTLLVN 220
D ++P IV E LR P P + R++ T V G +P D ++VN
Sbjct: 290 ---------DPGRIPA---IVEEVLRYRPPFPQM--QRTTTKATEVAGVPIPAD--VMVN 333
Query: 221 AWAI--HRDPELWDEPTCFKPERFESSDSEAHKLMPFGLGRRACPGASLAQ 269
W + +RD + D+P F P R ++ + FG G C GA LA+
Sbjct: 334 TWVLSANRDSDAHDDPDRFDPSRKSGGAAQ----LSFGHGVHFCLGAPLAR 380
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 86/211 (40%), Gaps = 39/211 (18%)
Query: 86 NKKAGLESMDTMIDHMLSLQESQP--QYYTDQ-------------NIKALMLTLIIAGID 130
+++ + ID +++ +ES+P ++ Q + +L L+ AG +
Sbjct: 189 DRRRAFAELRAYIDDLITRKESEPGDDLFSRQIARQRQEGTLDHAGLVSLAFLLLTAGHE 248
Query: 131 TSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNP 190
T+A + + L++HPE L +A + + P V E LR
Sbjct: 249 TTANMISLGVVGLLSHPEQLTVVKA---------------NPGRTPM---AVEELLRYFT 290
Query: 191 AAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDSEAH 250
A + +++D +GG + ++V+ + + DP ++ +P ER A
Sbjct: 291 IADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVER------GAR 344
Query: 251 KLMPFGLGRRACPGASLAQRLVGLTLGSLLQ 281
+ FG G C G +LA+ + + +L +
Sbjct: 345 HHLAFGFGPHQCLGQNLARMELQIVFDTLFR 375
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 72/171 (42%), Gaps = 29/171 (16%)
Query: 102 LSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQV 161
L L E + D+ L++AG T+ + L + L HP +A AE
Sbjct: 216 LVLAEVDGRALDDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHP-AHWDAAAE----- 269
Query: 162 GQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCT-VGGYDVPRDTTLLVN 220
D ++P IV E LR P P + R++ T V G +P D ++VN
Sbjct: 270 ---------DPGRIPA---IVEEVLRYRPPFPQM--QRTTTKATEVAGVPIPAD--VMVN 313
Query: 221 AWAI--HRDPELWDEPTCFKPERFESSDSEAHKLMPFGLGRRACPGASLAQ 269
W + +RD + D+P F P R ++ + FG G C GA LA+
Sbjct: 314 TWVLSANRDSDAHDDPDRFDPSRKSGGAAQ----LSFGHGVHFCLGAPLAR 360
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 75/184 (40%), Gaps = 37/184 (20%)
Query: 113 TDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNAR--AELNAQVGQECLIDES 170
T++ + + L IAG +T+ + ++ L+ HPE L R +L +ECL ES
Sbjct: 220 TEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPDLIGTAVEECLRYES 279
Query: 171 DLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPEL 230
T R+ +S+D + G + + + + A +RDP +
Sbjct: 280 P----------TQMTARV-----------ASEDIDICGVTIRQGEQVYLLLGAANRDPSI 318
Query: 231 WDEPTCFKPERFESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSLLQC-------- 282
+ P F R + + FG G C G+SLA+ + + +LLQ
Sbjct: 319 FTNPDVFDITR------SPNPHLSFGHGHHVCLGSSLARLEAQIAINTLLQRMPSLNLAD 372
Query: 283 FEWK 286
FEW+
Sbjct: 373 FEWR 376
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
Query: 180 NIVSETLR-LNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFK 238
+V E LR +PA +L ++ D T+ G D+P T ++ A +RDP +D+P F
Sbjct: 289 TVVEEVLRWTSPAMHVL--RVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFL 346
Query: 239 PERFESSDSEAHKLMPFGLGRRACPGASLAQ 269
P R + ++ + FG G C G++LA+
Sbjct: 347 PGR------KPNRHITFGHGMHHCLGSALAR 371
>pdb|3CY1|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 S279a
Mutant From M. Tuberculosis
Length = 396
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 25/182 (13%)
Query: 102 LSLQESQPQY--YTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNA 159
LS P Y +D+ + +T AG+ ++ L A+ +L+ P+ L+N
Sbjct: 206 LSRLRKDPAYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQ-LRN------- 257
Query: 160 QVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLV 219
L+ E K + V E LR+N A +P ++ D VG V + +LV
Sbjct: 258 ------LLHE----KPELIPAGVEELLRINLAFADGLPRLATADIQVGDVLVRKGELVLV 307
Query: 220 NAWAIHRDPELWDEPTCFKPERFESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSL 279
+ DPE + P + +R + +H + FG G+ CPG++L +R + + +L
Sbjct: 308 LLEGANFDPEHFPNPGSIELDR---PNPTSH--LAFGRGQHFCPGSALGRRHAQIGIEAL 362
Query: 280 LQ 281
L+
Sbjct: 363 LK 364
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 27/171 (15%)
Query: 111 YYTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDES 170
Y D+ I A + + AG DT++ + A+ L +PE L A+ S
Sbjct: 251 YIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAK---------------S 295
Query: 171 DLSKLPYLRNIVSETLRLNPAAPLLIPHRSS-DDCTVGGYDVPRDTTLLVNAWAIHRDPE 229
D + +P L V E +R AP+ R++ D V G ++ R ++++ + +RD E
Sbjct: 296 DPALIPRL---VDEAVRWT--APVKSFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEE 350
Query: 230 LWDEPTCFKPERFESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSLL 280
++ P F RF ++ + FG G C G LA+ + + LL
Sbjct: 351 VFSNPDEFDITRF------PNRHLGFGWGAHMCLGQHLAKLEMKIFFEELL 395
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 181 IVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPE 240
I++E +R++P L ++D +GG + + + A +RDPE++D+P F
Sbjct: 269 IINEMVRMDPPQ-LSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHT 327
Query: 241 RFESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGED 291
R A + + FGLG +C G +++ L + +E + E+
Sbjct: 328 R----PPAASRNLSFGLGPHSCAGQIISRAEATTVFAVLAERYERIELAEE 374
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 181 IVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPE 240
I++E +R++P L ++D +GG + + + A +RDPE++D+P F
Sbjct: 267 IINEMVRMDPPQ-LSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHT 325
Query: 241 RFESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGED 291
R A + + FGLG +C G +++ L + +E + E+
Sbjct: 326 R----PPAASRNLSFGLGPHSCAGQIISRAEATTVFAVLAERYERIELAEE 372
>pdb|1UED|A Chain A, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis.
pdb|1UED|B Chain B, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis
Length = 406
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 86/218 (39%), Gaps = 37/218 (16%)
Query: 85 RNKKAGLESMDTMIDHMLSLQESQPQ-------------YYTDQNIKALMLTLIIAGIDT 131
+ + A + + +D++L+ Q + P TD+ +K L LI+ G++T
Sbjct: 190 KARAADSAAFNRYLDNLLARQRADPDDGLLGMIVRDHGDNVTDEELKGLCTALILGGVET 249
Query: 132 SAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPA 191
A + + + L+++P GQ L+ ES +V+E +R
Sbjct: 250 VAGMIGFGVLALLDNP--------------GQIELLFESPEKA----ERVVNELVRYLSP 291
Query: 192 APLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDSEAHK 251
P + D + G + +L + +RD L +P R SD
Sbjct: 292 VQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDANRAAVSD----- 346
Query: 252 LMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIG 289
+ FG G C GA+LA+ ++ + +L + F R+
Sbjct: 347 -VGFGHGIHYCVGAALARSMLRMAYQTLWRRFPGLRLA 383
>pdb|1N40|A Chain A, Atomic Structure Of Cyp121, A Mycobacterial P450
pdb|1N4G|A Chain A, Structure Of Cyp121, A Mycobacterial P450, In Complex With
Iodopyrazole
pdb|2IJ5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|B Chain B, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|C Chain C, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|D Chain D, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|E Chain E, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|F Chain F, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ7|A Chain A, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|B Chain B, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|C Chain C, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|D Chain D, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|E Chain E, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|F Chain F, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|3G5F|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|3G5H|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|4G44|A Chain A, Structure Of P450 Cyp121 In Complex With Lead Compound
Mb286, 3-((1h- 1,2,4-Triazol-1-Yl)methyl)aniline
pdb|4G45|A Chain A, Structure Of Cytochrome Cyp121 In Complex With
2-Methylquinolin-6- Amine
pdb|4G46|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-Oxo-4,5,6,7- Tetrahydrobenzofuran-3-Carboxylate
pdb|4G47|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-(1h-1,2,4- Triazol-1-Yl)phenol
pdb|4G48|A Chain A, Structure Of Cyp121 In Complex With
4-(4-Phenoxy-1h-Pyrazol-3-Yl) Benzene-1,3-Diol
Length = 396
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 25/182 (13%)
Query: 102 LSLQESQPQY--YTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNA 159
LS P Y +D+ + +T AG+ ++ L A+ +L+ P+ L+N E
Sbjct: 206 LSRLRKDPAYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQ-LRNLLHE--- 261
Query: 160 QVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLV 219
K + V E LR+N + +P ++ D VG V + +LV
Sbjct: 262 --------------KPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLV 307
Query: 220 NAWAIHRDPELWDEPTCFKPERFESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSL 279
+ DPE + P + +R + +H + FG G+ CPG++L +R + + +L
Sbjct: 308 LLEGANFDPEHFPNPGSIELDR---PNPTSH--LAFGRGQHFCPGSALGRRHAQIGIEAL 362
Query: 280 LQ 281
L+
Sbjct: 363 LK 364
>pdb|4G1X|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4-(1h-1,2,4-Triazol-1-Yl)quinolin-6-Amine
pdb|4G2G|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4,4'-(1h-1,2,3-Triazole-1,5-Diyl)diphenol
Length = 395
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 25/182 (13%)
Query: 102 LSLQESQPQY--YTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNA 159
LS P Y +D+ + +T AG+ ++ L A+ +L+ P+ L+N E
Sbjct: 205 LSRLRKDPAYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQ-LRNLLHE--- 260
Query: 160 QVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLV 219
K + V E LR+N + +P ++ D VG V + +LV
Sbjct: 261 --------------KPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLV 306
Query: 220 NAWAIHRDPELWDEPTCFKPERFESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSL 279
+ DPE + P + +R + +H + FG G+ CPG++L +R + + +L
Sbjct: 307 LLEGANFDPEHFPNPGSIELDR---PNPTSH--LAFGRGQHFCPGSALGRRHAQIGIEAL 361
Query: 280 LQ 281
L+
Sbjct: 362 LK 363
>pdb|3CXZ|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 R386l Mutant
From M. Tuberculosis
Length = 396
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 25/182 (13%)
Query: 102 LSLQESQPQY--YTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNA 159
LS P Y +D+ + +T AG+ ++ L A+ +L+ P+ L+N E
Sbjct: 206 LSRLRKDPAYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQ-LRNLLHE--- 261
Query: 160 QVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLV 219
K + V E LR+N + +P ++ D VG V + +LV
Sbjct: 262 --------------KPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLV 307
Query: 220 NAWAIHRDPELWDEPTCFKPERFESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSL 279
+ DPE + P + +R + +H + FG G+ CPG++L +R + + +L
Sbjct: 308 LLEGANFDPEHFPNPGSIELDR---PNPTSH--LAFGRGQHFCPGSALGRRHAQIGIEAL 362
Query: 280 LQ 281
L+
Sbjct: 363 LK 364
>pdb|3CY0|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 S237a Mutant
From Mycobacterium Tuberculosis
Length = 396
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 25/182 (13%)
Query: 102 LSLQESQPQY--YTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNA 159
LS P Y +D+ + +T AG+ + L A+ +L+ P+ L+N
Sbjct: 206 LSRLRKDPAYSHVSDELFATIGVTFFGAGVIATGSFLTTALISLIQRPQ-LRN------- 257
Query: 160 QVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLV 219
L+ E K + V E LR+N + +P ++ D VG V + +LV
Sbjct: 258 ------LLHE----KPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLV 307
Query: 220 NAWAIHRDPELWDEPTCFKPERFESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSL 279
+ DPE + P + +R + +H + FG G+ CPG++L +R + + +L
Sbjct: 308 LLEGANFDPEHFPNPGSIELDR---PNPTSH--LAFGRGQHFCPGSALGRRHAQIGIEAL 362
Query: 280 LQ 281
L+
Sbjct: 363 LK 364
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 70/157 (44%), Gaps = 29/157 (18%)
Query: 115 QNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLK--NARAELNAQVGQECLIDESDL 172
I + ++T I G +T A + A+ +L+ HP+ L R +L AQ +ECL
Sbjct: 221 NEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLRRRPDLLAQAVEECLR----- 275
Query: 173 SKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWD 232
Y ++ S T +L+ D + G + RD ++V A A +RDP +D
Sbjct: 276 ----YDPSVQSNTRQLDV------------DVELRGRRLRRDDVVVVLAGAANRDPRRYD 319
Query: 233 EPTCFKPERFESSDSEAHKLMPFGLGRRACPGASLAQ 269
P F ER + M FG G R C G+ LA+
Sbjct: 320 RPDDFDIER------DPVPSMSFGAGMRYCLGSYLAR 350
>pdb|3CXV|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 A233g
Mutant From Mycobacterium Tuberculosis
Length = 396
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 78/182 (42%), Gaps = 25/182 (13%)
Query: 102 LSLQESQPQY--YTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNA 159
LS P Y +D+ + +T G+ ++ L A+ +L+ P+ L+N E
Sbjct: 206 LSRLRKDPAYSHVSDELFATIGVTFFGGGVISTGSFLTTALISLIQRPQ-LRNLLHE--- 261
Query: 160 QVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLV 219
K + V E LR+N + +P ++ D VG V + +LV
Sbjct: 262 --------------KPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLV 307
Query: 220 NAWAIHRDPELWDEPTCFKPERFESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSL 279
+ DPE + P + +R + +H + FG G+ CPG++L +R + + +L
Sbjct: 308 LLEGANFDPEHFPNPGSIELDR---PNPTSH--LAFGRGQHFCPGSALGRRHAQIGIEAL 362
Query: 280 LQ 281
L+
Sbjct: 363 LK 364
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 25/177 (14%)
Query: 115 QNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSK 174
+ ++ +L +I AG +T+ ++ A+ L+ P+ Q L+ + +++
Sbjct: 230 EELRDTLLLMISAGYETTVNVIDQAVHTLLTRPD--------------QLALVRKGEVT- 274
Query: 175 LPYLRNIVSETLRLNPAAPLL-IPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDE 233
++V ETLR PA L + + +D G + R +L + A +R P+ ++
Sbjct: 275 ---WADVVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHED 331
Query: 234 PTCFKPERFESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGE 290
F R + + FG G C GA LA+ V L L SL F R+ +
Sbjct: 332 ADTFDATR------TVKEHLAFGHGVHFCLGAPLARMEVTLALESLFGRFPDLRLAD 382
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 182 VSETLRLNPAAPLLIPHR-SSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPE 240
V E +R +P P+ R + +D +G +D+PR + ++ + +RDP + +P
Sbjct: 291 VEELMRYDP--PVQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDVH 348
Query: 241 RFESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSLL 280
R A + + FGLG C GA+LA+ + L +LL
Sbjct: 349 R------AAERQVGFGLGIHYCLGATLARAEAEIGLRALL 382
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 85/201 (42%), Gaps = 25/201 (12%)
Query: 92 ESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLK 151
E D +I +++ T+Q + L +T I AG +T+ + + L++ PE+
Sbjct: 215 EPRDDLISKLVTDHLVPGNVTTEQLLSTLGIT-INAGRETTTSMIALSTLLLLDRPELPA 273
Query: 152 NARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDV 211
R D +P + + L + + PL + +++D + G V
Sbjct: 274 ELR---------------KDPDLMPAAVDELLRVLSVADSIPLRV---AAEDIELSGRTV 315
Query: 212 PRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDSEAHKLMPFGLGRRACPGASLAQRL 271
P D ++ + DPE +D+ PER + ++ H + FG G C G LA+
Sbjct: 316 PADDGVIALLAGANHDPEQFDD-----PERVDFHRTDNHHVA-FGYGVHQCVGQHLARLE 369
Query: 272 VGLTLGSLLQCFEWKRIGEDK 292
+ + L +LL+ R+ ++
Sbjct: 370 LEVALETLLRRVPTLRLAGER 390
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 67/168 (39%), Gaps = 24/168 (14%)
Query: 123 TLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIV 182
TL+IA DT+A + A L++ P+ L R E + VG N V
Sbjct: 233 TLLIAAHDTTACMIGLGTALLLDSPDQLALLR-EDPSLVG-----------------NAV 274
Query: 183 SETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERF 242
E LR ++ D +GG + + ++ + A DP +E PERF
Sbjct: 275 EELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEE-----PERF 329
Query: 243 ESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGE 290
+ + A L FG G C G LA+ + + +L + R+ +
Sbjct: 330 DITRRPAPHLA-FGFGAHQCIGQQLARIELQIVFETLFRRLPGLRLAK 376
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 67/168 (39%), Gaps = 24/168 (14%)
Query: 123 TLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIV 182
TL+IA DT+A + A L++ P+ L R E + VG N V
Sbjct: 233 TLLIAAHDTTACMIGLGTALLLDSPDQLALLR-EDPSLVG-----------------NAV 274
Query: 183 SETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERF 242
E LR ++ D +GG + + ++ + A DP +E PERF
Sbjct: 275 EELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEE-----PERF 329
Query: 243 ESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGE 290
+ + A L FG G C G LA+ + + +L + R+ +
Sbjct: 330 DITRRPAPHLA-FGFGAHQCIGQQLARIELQIVFETLFRRLPGLRLAK 376
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 67/168 (39%), Gaps = 24/168 (14%)
Query: 123 TLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIV 182
TL+IA DT+A + A L++ P+ L R E + VG N V
Sbjct: 233 TLLIAAHDTTACMIGLGTALLLDSPDQLALLR-EDPSLVG-----------------NAV 274
Query: 183 SETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERF 242
E LR ++ D +GG + + ++ + A DP +E PERF
Sbjct: 275 EELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEE-----PERF 329
Query: 243 ESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGE 290
+ + A L FG G C G LA+ + + +L + R+ +
Sbjct: 330 DITRRPAPHLA-FGFGAHQCIGQQLARIELQIVFETLFRRLPGLRLAK 376
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 12/116 (10%)
Query: 182 VSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAW--AIHRDPELWDEPTCFKP 239
V E LR +P P++ R + + V D D LV W + +RD E++ +P F P
Sbjct: 244 VEEALRFSP--PVMRTIRVTKE-KVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIP 300
Query: 240 ERFESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRI-GEDKID 294
+R + + FG G C GA LA+ + L + F K I ++KID
Sbjct: 301 DR------TPNPHLSFGSGIHLCLGAPLARLEARIALEEFAKKFRVKEIVKKEKID 350
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 76/194 (39%), Gaps = 25/194 (12%)
Query: 91 LESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVL 150
+E D +I + + ++ +P + + L++AG T + +A L HP+ L
Sbjct: 203 VEPKDDIISKLCT-EQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQL 261
Query: 151 KNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYD 210
+A N + + V E R + A+ L I + +D +G
Sbjct: 262 AQLKA--NPSLAPQ----------------FVEELCRYHTASALAIKRTAKEDVMIGDKL 303
Query: 211 VPRDTTLLVNAWAIHRDPELWDEPTCFKPER-FESSDSEAHKLMPFGLGRRACPGASLAQ 269
V + ++ + + +RD E+++ P F R + D + FG G C LA+
Sbjct: 304 VRANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQDP-----LGFGFGDHRCIAEHLAK 358
Query: 270 RLVGLTLGSLLQCF 283
+ +L Q F
Sbjct: 359 AELTTVFSTLYQKF 372
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 76/194 (39%), Gaps = 25/194 (12%)
Query: 91 LESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVL 150
+E D +I + + ++ +P + + L++AG T + +A L HP+ L
Sbjct: 204 VEPKDDIISKLCT-EQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQL 262
Query: 151 KNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYD 210
+A N + + V E R + A+ L I + +D +G
Sbjct: 263 AQLKA--NPSLAPQ----------------FVEELCRYHTASALAIKRTAKEDVMIGDKL 304
Query: 211 VPRDTTLLVNAWAIHRDPELWDEPTCFKPER-FESSDSEAHKLMPFGLGRRACPGASLAQ 269
V + ++ + + +RD E+++ P F R + D + FG G C LA+
Sbjct: 305 VRANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQDP-----LGFGFGDHRCIAEHLAK 359
Query: 270 RLVGLTLGSLLQCF 283
+ +L Q F
Sbjct: 360 AELTTVFSTLYQKF 373
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 76/194 (39%), Gaps = 25/194 (12%)
Query: 91 LESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVL 150
+E D +I + + ++ +P + + L++AG T + +A L HP+ L
Sbjct: 204 VEPKDDIISKLCT-EQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQL 262
Query: 151 KNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYD 210
+A N + + V E R + A+ L I + +D +G
Sbjct: 263 AQLKA--NPSLAPQ----------------FVEELCRYHTASALAIKRTAKEDVMIGDKL 304
Query: 211 VPRDTTLLVNAWAIHRDPELWDEPTCFKPER-FESSDSEAHKLMPFGLGRRACPGASLAQ 269
V + ++ + + +RD E+++ P F R + D + FG G C LA+
Sbjct: 305 VRANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQDP-----LGFGFGDHRCIAEHLAK 359
Query: 270 RLVGLTLGSLLQCF 283
+ +L Q F
Sbjct: 360 AELTTVFSTLYQKF 373
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Its Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 76/194 (39%), Gaps = 25/194 (12%)
Query: 91 LESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVL 150
+E D +I + + ++ +P + + L++AG T + +A L HP+ L
Sbjct: 203 VEPKDDIISKLCT-EQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQL 261
Query: 151 KNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYD 210
+A N + + V E R + A+ L I + +D +G
Sbjct: 262 AQLKA--NPSLAPQ----------------FVEELCRYHTASALAIKRTAKEDVMIGDKL 303
Query: 211 VPRDTTLLVNAWAIHRDPELWDEPTCFKPER-FESSDSEAHKLMPFGLGRRACPGASLAQ 269
V + ++ + + +RD E+++ P F R + D + FG G C LA+
Sbjct: 304 VRANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQDP-----LGFGFGDHRCIAEHLAK 358
Query: 270 RLVGLTLGSLLQCF 283
+ +L Q F
Sbjct: 359 AELTTVFSTLYQKF 372
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 76/194 (39%), Gaps = 25/194 (12%)
Query: 91 LESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVL 150
+E D +I + + ++ +P + + L++AG T + +A L HP+ L
Sbjct: 205 VEPKDDIISKLCT-EQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQL 263
Query: 151 KNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYD 210
+A N + + V E R + A+ L I + +D +G
Sbjct: 264 AQLKA--NPSLAPQ----------------FVEELCRYHTASALAIKRTAKEDVMIGDKL 305
Query: 211 VPRDTTLLVNAWAIHRDPELWDEPTCFKPER-FESSDSEAHKLMPFGLGRRACPGASLAQ 269
V + ++ + + +RD E+++ P F R + D + FG G C LA+
Sbjct: 306 VRANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQDP-----LGFGFGDHRCIAEHLAK 360
Query: 270 RLVGLTLGSLLQCF 283
+ +L Q F
Sbjct: 361 AELTTVFSTLYQKF 374
>pdb|1LFK|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LG9|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LGF|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
Length = 398
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 28/201 (13%)
Query: 113 TDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARA-ELNAQVGQECLIDESD 171
TD+ ++ + +++AG D + + + ++ HPE + R E +AQ + LI
Sbjct: 222 TDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQSAQRAVDELIR--- 278
Query: 172 LSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW 231
YL S T R+ + +D T+ G ++ + +++ + A +RDP L
Sbjct: 279 -----YLTVPYSPTPRI-----------AREDLTLAGQEIKKGDSVICSLPAANRDPALA 322
Query: 232 DEPTCFKPERFESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGED 291
+ R E + FG G C GA+LA+ + L + F R+ +
Sbjct: 323 PDVDRLDVTR------EPIPHVAFGHGVHHCLGAALARLELRTVFTELWRRFPALRLADP 376
Query: 292 KIDMTEGRGITMPKAVALEVM 312
D TE R +T P E+M
Sbjct: 377 AQD-TEFR-LTTPAYGLTELM 395
>pdb|3CXY|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 P346l
Mutant From M. Tuberculosis
Length = 396
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 78/182 (42%), Gaps = 25/182 (13%)
Query: 102 LSLQESQPQY--YTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNA 159
LS P Y +D+ + +T AG+ ++ L A+ +L+ P+ L+N E
Sbjct: 206 LSRLRKDPAYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQ-LRNLLHE--- 261
Query: 160 QVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLV 219
K + V E LR+N + +P ++ D VG V + +LV
Sbjct: 262 --------------KPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLV 307
Query: 220 NAWAIHRDPELWDEPTCFKPERFESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSL 279
+ DPE + P + +R + +H + FG G+ C G++L +R + + +L
Sbjct: 308 LLEGANFDPEHFPNPGSIELDR---PNPTSH--LAFGRGQHFCLGSALGRRHAQIGIEAL 362
Query: 280 LQ 281
L+
Sbjct: 363 LK 364
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 75/194 (38%), Gaps = 25/194 (12%)
Query: 91 LESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVL 150
+E D +I + + ++ +P + + L++AG T + +A L HP+ L
Sbjct: 203 VEPKDDIISKLCT-EQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQL 261
Query: 151 KNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYD 210
+A N + + V E R + A L I + +D +G
Sbjct: 262 AQLKA--NPSLAPQ----------------FVEELCRYHTAVALAIKRTAKEDVMIGDKL 303
Query: 211 VPRDTTLLVNAWAIHRDPELWDEPTCFKPER-FESSDSEAHKLMPFGLGRRACPGASLAQ 269
V + ++ + + +RD E+++ P F R + D + FG G C LA+
Sbjct: 304 VRANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQDP-----LGFGFGDHRCIAEHLAK 358
Query: 270 RLVGLTLGSLLQCF 283
+ +L Q F
Sbjct: 359 AELTTVFSTLYQKF 372
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 75/194 (38%), Gaps = 25/194 (12%)
Query: 91 LESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVL 150
+E D +I + + ++ +P + + L++AG T + +A L HP+ L
Sbjct: 204 VEPKDDIISKLCT-EQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQL 262
Query: 151 KNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYD 210
+A N + + V E R + A L I + +D +G
Sbjct: 263 AQLKA--NPSLAPQ----------------FVEELCRYHTAVALAIKRTAKEDVMIGDKL 304
Query: 211 VPRDTTLLVNAWAIHRDPELWDEPTCFKPER-FESSDSEAHKLMPFGLGRRACPGASLAQ 269
V + ++ + + +RD E+++ P F R + D + FG G C LA+
Sbjct: 305 VRANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQDP-----LGFGFGDHRCIAEHLAK 359
Query: 270 RLVGLTLGSLLQCF 283
+ +L Q F
Sbjct: 360 AELTTVFSTLYQKF 373
>pdb|1EHF|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 75/194 (38%), Gaps = 25/194 (12%)
Query: 91 LESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVL 150
+E D +I + + ++ +P + + L++AG T + +A L HP+ L
Sbjct: 204 VEPKDDIISKLCT-EQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQL 262
Query: 151 KNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYD 210
+A N + + V E R + A L I + +D +G
Sbjct: 263 AQLKA--NPSLAPQ----------------FVEELCRYHTATALAIKRTAKEDVMIGDKL 304
Query: 211 VPRDTTLLVNAWAIHRDPELWDEPTCFKPER-FESSDSEAHKLMPFGLGRRACPGASLAQ 269
V + ++ + + +RD E+++ P F R + D + FG G C LA+
Sbjct: 305 VRANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQDP-----LGFGFGDHRCIAEHLAK 359
Query: 270 RLVGLTLGSLLQCF 283
+ +L Q F
Sbjct: 360 AELTTVFSTLYQKF 373
>pdb|1CMJ|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 75/194 (38%), Gaps = 25/194 (12%)
Query: 91 LESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVL 150
+E D +I + + ++ +P + + L++AG T + +A L HP+ L
Sbjct: 203 VEPKDDIISKLCT-EQVKPGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQL 261
Query: 151 KNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYD 210
+A N + + V E R + A L I + +D +G
Sbjct: 262 AQLKA--NPSLAPQ----------------FVEELCRYHTATALAIKRTAKEDVMIGDKL 303
Query: 211 VPRDTTLLVNAWAIHRDPELWDEPTCFKPER-FESSDSEAHKLMPFGLGRRACPGASLAQ 269
V + ++ + + +RD E+++ P F R + D + FG G C LA+
Sbjct: 304 VRANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQDP-----LGFGFGDHRCIAEHLAK 358
Query: 270 RLVGLTLGSLLQCF 283
+ +L Q F
Sbjct: 359 AELTTVFSTLYQKF 372
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 77/189 (40%), Gaps = 24/189 (12%)
Query: 92 ESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLK 151
E D ++ +L++ + + + + A+ + L+IAG +T+ + + L+ HP+ K
Sbjct: 201 EPDDALLSSLLAVSDEDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRK 260
Query: 152 NARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDV 211
L ++ L + + V E LR + +++D T G +
Sbjct: 261 -------------LLAEDPSL-----ISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTI 302
Query: 212 PRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDSEAHKLMPFGLGRRACPGASLAQRL 271
P +++ A +RD + EP R +A + FG G C GA LA+
Sbjct: 303 PAGEMVMLGLAAANRDADWMPEPDRLDITR------DASGGVFFGHGIHFCLGAQLARLE 356
Query: 272 VGLTLGSLL 280
+ +G L
Sbjct: 357 GRVAIGRLF 365
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 96/222 (43%), Gaps = 33/222 (14%)
Query: 80 LVDQHRNKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITLEWA 139
L+D+ R E D ++ ++ ++ Q ++Q + L + L++AG +++ +
Sbjct: 213 LIDRRRK-----EPTDDLVSALVQARDQQ-DSLSEQELLDLAIGLLVAGYESTTTQIADF 266
Query: 140 MANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNP-AAPLLIPH 198
+ L+ PE+ + L+D +L + + V E R P +P
Sbjct: 267 VYLLMTRPELRRQ-------------LLDRPEL-----IPSAVEELTRWVPLGVGTAVPR 308
Query: 199 RSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDSEAHKLMPFGLG 258
+ +D T+ G + +L + A +RD + + +R + D ++ + FG G
Sbjct: 309 YAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDA-----DRIDV-DRTPNQHLGFGHG 362
Query: 259 RRACPGASLAQRLVGLTLGSLLQCFEWKRIG--EDKIDMTEG 298
C GA LA+ + + L LLQ R+G E ++ +EG
Sbjct: 363 VHHCLGAPLARVELQVALEVLLQRLPGIRLGIPETQLRWSEG 404
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 77/189 (40%), Gaps = 24/189 (12%)
Query: 92 ESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLK 151
E D ++ +L++ + + + + A+ + L+IAG +T+ + + L+ HP+ K
Sbjct: 201 EPDDALLSSLLAVSDMDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRK 260
Query: 152 NARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDV 211
L ++ L + + V E LR + +++D T G +
Sbjct: 261 -------------LLAEDPSL-----ISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTI 302
Query: 212 PRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDSEAHKLMPFGLGRRACPGASLAQRL 271
P +++ A +RD + EP R +A + FG G C GA LA+
Sbjct: 303 PAGEMVMLGLAAANRDADWMPEPDRLDITR------DASGGVFFGHGIHFCLGAQLARLE 356
Query: 272 VGLTLGSLL 280
+ +G L
Sbjct: 357 GRVAIGRLF 365
>pdb|3CV8|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84f Mutant)
Length = 412
Score = 34.7 bits (78), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 85/204 (41%), Gaps = 30/204 (14%)
Query: 77 LQGLVDQHRNKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITL 136
L GL+ Q + + ++ +++ Q + + ++ I ML L+IAG +T+A
Sbjct: 200 LDGLITQFQTEPGA-----GLVGALVADQLANGEIDREELISTAML-LLIAGHETTASMT 253
Query: 137 EWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLI 196
++ L++HPE RA D S +P V E LR A +
Sbjct: 254 SLSVITLLDHPEQYAALRA---------------DRSLVP---GAVEELLRYLAIADIAG 295
Query: 197 PHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDSEAHKLMPFG 256
++ D V G + ++V +RD ++++P R S H L FG
Sbjct: 296 GRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHR-----SARHHLA-FG 349
Query: 257 LGRRACPGASLAQRLVGLTLGSLL 280
G C G +LA+ + + L +L+
Sbjct: 350 FGVHQCLGQNLARLELEVILNALM 373
>pdb|2ZBY|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant)
pdb|2ZBZ|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant) In Complex With
1,25-Dihydroxyvitamin D3
Length = 412
Score = 34.7 bits (78), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 85/204 (41%), Gaps = 30/204 (14%)
Query: 77 LQGLVDQHRNKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITL 136
L GL+ Q + + ++ +++ Q + + ++ I ML L+IAG +T+A
Sbjct: 200 LDGLITQFQTEPGA-----GLVGALVADQLANGEIDREELISTAML-LLIAGHETTASMT 253
Query: 137 EWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLI 196
++ L++HPE RA D S +P V E LR A +
Sbjct: 254 SLSVITLLDHPEQYAALRA---------------DRSLVP---GAVEELLRYLAIADIAG 295
Query: 197 PHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDSEAHKLMPFG 256
++ D V G + ++V +RD ++++P R S H L FG
Sbjct: 296 GRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHR-----SARHHLA-FG 349
Query: 257 LGRRACPGASLAQRLVGLTLGSLL 280
G C G +LA+ + + L +L+
Sbjct: 350 FGVHQCLGQNLARLELEVILNALM 373
>pdb|3CV9|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R73aR84A MUTANT) IN COMPLEX WITH 1ALPHA,25-
Dihydroxyvitamin D3
Length = 412
Score = 34.7 bits (78), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 85/204 (41%), Gaps = 30/204 (14%)
Query: 77 LQGLVDQHRNKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITL 136
L GL+ Q + + ++ +++ Q + + ++ I ML L+IAG +T+A
Sbjct: 200 LDGLITQFQTEPGA-----GLVGALVADQLANGEIDREELISTAML-LLIAGHETTASMT 253
Query: 137 EWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLI 196
++ L++HPE RA D S +P V E LR A +
Sbjct: 254 SLSVITLLDHPEQYAALRA---------------DRSLVP---GAVEELLRYLAIADIAG 295
Query: 197 PHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDSEAHKLMPFG 256
++ D V G + ++V +RD ++++P R S H L FG
Sbjct: 296 GRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHR-----SARHHLA-FG 349
Query: 257 LGRRACPGASLAQRLVGLTLGSLL 280
G C G +LA+ + + L +L+
Sbjct: 350 FGVHQCLGQNLARLELEVILNALM 373
>pdb|2ZBX|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (Wild Type) With Imidazole Bound
Length = 412
Score = 34.7 bits (78), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 85/204 (41%), Gaps = 30/204 (14%)
Query: 77 LQGLVDQHRNKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITL 136
L GL+ Q + + ++ +++ Q + + ++ I ML L+IAG +T+A
Sbjct: 200 LDGLITQFQTEPGA-----GLVGALVADQLANGEIDREELISTAML-LLIAGHETTASMT 253
Query: 137 EWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLI 196
++ L++HPE RA D S +P V E LR A +
Sbjct: 254 SLSVITLLDHPEQYAALRA---------------DRSLVP---GAVEELLRYLAIADIAG 295
Query: 197 PHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDSEAHKLMPFG 256
++ D V G + ++V +RD ++++P R S H L FG
Sbjct: 296 GRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHR-----SARHHLA-FG 349
Query: 257 LGRRACPGASLAQRLVGLTLGSLL 280
G C G +LA+ + + L +L+
Sbjct: 350 FGVHQCLGQNLARLELEVILNALM 373
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 34.3 bits (77), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 14/82 (17%)
Query: 196 IPHRSS--------DDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDS 247
IPHR++ +D + G + + V+ A +RDPE++ +P ER
Sbjct: 285 IPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER------ 338
Query: 248 EAHKLMPFGLGRRACPGASLAQ 269
+ + FG G CPG LA+
Sbjct: 339 SPNPHVSFGFGPHYCPGGMLAR 360
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 34.3 bits (77), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 14/82 (17%)
Query: 196 IPHRSS--------DDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDS 247
IPHR++ +D + G + + V+ A +RDPE++ +P ER
Sbjct: 285 IPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER------ 338
Query: 248 EAHKLMPFGLGRRACPGASLAQ 269
+ + FG G CPG LA+
Sbjct: 339 SPNPHVSFGFGPHYCPGGMLAR 360
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 34.3 bits (77), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 14/82 (17%)
Query: 196 IPHRSS--------DDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDS 247
IPHR++ +D + G + + V+ A +RDPE++ +P ER
Sbjct: 285 IPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER------ 338
Query: 248 EAHKLMPFGLGRRACPGASLAQ 269
+ + FG G CPG LA+
Sbjct: 339 SPNPHVSFGFGPHYCPGGMLAR 360
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 34.3 bits (77), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 14/82 (17%)
Query: 196 IPHRSS--------DDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDS 247
IPHR++ +D + G + + V+ A +RDPE++ +P ER
Sbjct: 285 IPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER------ 338
Query: 248 EAHKLMPFGLGRRACPGASLAQ 269
+ + FG G CPG LA+
Sbjct: 339 SPNPHVSFGFGPHYCPGGMLAR 360
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 34.3 bits (77), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 14/82 (17%)
Query: 196 IPHRSS--------DDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDS 247
IPHR++ +D + G + + V+ A +RDPE++ +P ER
Sbjct: 285 IPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER------ 338
Query: 248 EAHKLMPFGLGRRACPGASLAQ 269
+ + FG G CPG LA+
Sbjct: 339 SPNPHVSFGFGPHYCPGGMLAR 360
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 14/82 (17%)
Query: 196 IPHRSS--------DDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDS 247
IPHR++ +D + G + + V+ A +RDPE++ +P ER
Sbjct: 285 IPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER------ 338
Query: 248 EAHKLMPFGLGRRACPGASLAQ 269
+ + FG G CPG LA+
Sbjct: 339 SPNPHVSFGFGPHYCPGGMLAR 360
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 14/82 (17%)
Query: 196 IPHRSS--------DDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDS 247
IPHR++ +D + G + + V+ A +RDPE++ +P ER
Sbjct: 285 IPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFER------ 338
Query: 248 EAHKLMPFGLGRRACPGASLAQ 269
+ + FG G CPG LA+
Sbjct: 339 SPNPHVSFGFGPHYCPGGMLAR 360
>pdb|1F26|A Chain A, Crystal Structure Of No Complex Of Thr243val Mutants Of
Cytochrome P450nor
Length = 402
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 75/194 (38%), Gaps = 25/194 (12%)
Query: 91 LESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVL 150
+E D +I + + ++ +P + + L++AG + +A L HP+ L
Sbjct: 203 VEPKDDIISKLCT-EQVKPGNIDKSDAVQIAFLLLVAGNAVMVNMIALGVATLAQHPDQL 261
Query: 151 KNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYD 210
+A N + + V E R + A+ L I + +D +G
Sbjct: 262 AQLKA--NPSLAPQ----------------FVEELCRYHTASALAIKRTAKEDVMIGDKL 303
Query: 211 VPRDTTLLVNAWAIHRDPELWDEPTCFKPER-FESSDSEAHKLMPFGLGRRACPGASLAQ 269
V + ++ + + +RD E+++ P F R + D + FG G C LA+
Sbjct: 304 VRANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQDP-----LGFGFGDHRCIAEHLAK 358
Query: 270 RLVGLTLGSLLQCF 283
+ +L Q F
Sbjct: 359 AELTTVFSTLYQKF 372
>pdb|1F25|A Chain A, Crystal Structure Of No Complex Of Thr243asn Mutants Of
Cytochrome P450nor
Length = 402
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 75/194 (38%), Gaps = 25/194 (12%)
Query: 91 LESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVL 150
+E D +I + + ++ +P + + L++AG + +A L HP+ L
Sbjct: 203 VEPKDDIISKLCT-EQVKPGNIDKSDAVQIAFLLLVAGNANMVNMIALGVATLAQHPDQL 261
Query: 151 KNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYD 210
+A N + + V E R + A+ L I + +D +G
Sbjct: 262 AQLKA--NPSLAPQ----------------FVEELCRYHTASALAIKRTAKEDVMIGDKL 303
Query: 211 VPRDTTLLVNAWAIHRDPELWDEPTCFKPER-FESSDSEAHKLMPFGLGRRACPGASLAQ 269
V + ++ + + +RD E+++ P F R + D + FG G C LA+
Sbjct: 304 VRANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQDP-----LGFGFGDHRCIAEHLAK 358
Query: 270 RLVGLTLGSLLQCF 283
+ +L Q F
Sbjct: 359 AELTTVFSTLYQKF 372
>pdb|1F24|A Chain A, Crystal Structure Of No Complex Of Thr243ala Mutants Of
Cytochrome P450nor
Length = 402
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 75/194 (38%), Gaps = 25/194 (12%)
Query: 91 LESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVL 150
+E D +I + + ++ +P + + L++AG + +A L HP+ L
Sbjct: 203 VEPKDDIISKLCT-EQVKPGNIDKSDAVQIAFLLLVAGNAAMVNMIALGVATLAQHPDQL 261
Query: 151 KNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYD 210
+A N + + V E R + A+ L I + +D +G
Sbjct: 262 AQLKA--NPSLAPQ----------------FVEELCRYHTASALAIKRTAKEDVMIGDKL 303
Query: 211 VPRDTTLLVNAWAIHRDPELWDEPTCFKPER-FESSDSEAHKLMPFGLGRRACPGASLAQ 269
V + ++ + + +RD E+++ P F R + D + FG G C LA+
Sbjct: 304 VRANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQDP-----LGFGFGDHRCIAEHLAK 358
Query: 270 RLVGLTLGSLLQCF 283
+ +L Q F
Sbjct: 359 AELTTVFSTLYQKF 372
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 95/222 (42%), Gaps = 33/222 (14%)
Query: 80 LVDQHRNKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITLEWA 139
L+D+ R E D ++ ++ ++ Q ++Q + L + L++AG +++ +
Sbjct: 213 LIDRRRK-----EPTDDLVSALVQARDQQ-DSLSEQELLDLAIGLLVAGYESTTTQIADF 266
Query: 140 MANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNP-AAPLLIPH 198
+ L+ PE+ + L+D +L + + V E R P P
Sbjct: 267 VYLLMTRPELRRQ-------------LLDRPEL-----IPSAVEELTRWVPLGVGTAFPR 308
Query: 199 RSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDSEAHKLMPFGLG 258
+ +D T+ G + +L + A +RD + + +R + D ++ + FG G
Sbjct: 309 YAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDA-----DRIDV-DRTPNQHLGFGHG 362
Query: 259 RRACPGASLAQRLVGLTLGSLLQCFEWKRIG--EDKIDMTEG 298
C GA LA+ + + L LLQ R+G E ++ +EG
Sbjct: 363 VHHCLGAPLARVELQVALEVLLQRLPGIRLGIPETQLRWSEG 404
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Query: 135 TLEW-AMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAP 193
TL+W +A H ++ + R + + ++ + ++P +++V E+LR+ P P
Sbjct: 288 TLKWIGLAGENLHTQLAEEIRGAIKSYGDGNVTLEA--IEQMPLTKSVVYESLRIEPPVP 345
Query: 194 LLIPHRSSDDCTVGGYD----VPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDSEA 249
++ + T+ +D V + L +DP+++D P + P+RF D EA
Sbjct: 346 PQY-GKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRF-VGDGEA 403
>pdb|2X9P|A Chain A, X-Ray Structure Of The Substrate-Free Cytochrome P450 Pimd
- A Polyene Macrolide Antibiotic Pimaricin Epoxidase
pdb|2XBK|A Chain A, X-Ray Structure Of The Substrate-Bound Cytochrome P450
Pimd - A Polyene Macrolide Antibiotic Pimaricin
Epoxidase
Length = 404
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 25/158 (15%)
Query: 113 TDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDL 172
T+ + L + L+ AG+D+ A ++ + L HP+ A A+ +
Sbjct: 227 TEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHPDQRAAALADPD-------------- 272
Query: 173 SKLPYLRNIVSETLRLNPAAPLLIPHR-SSDDCTVGGYDVPRDTTLLVNAWAIHRDPELW 231
+ V E LR A ++P R +S+D GG + +L + + +
Sbjct: 273 ----VMARAVEEVLRTARAGGSVLPPRYASEDMEFGGVTIRAGDLVLFDLGLPN-----F 323
Query: 232 DEPTCFKPERFESSDSEAHKLMPFGLGRRACPGASLAQ 269
DE PE F+++ + L FG G C GA LA+
Sbjct: 324 DERAFTGPEEFDAARTPNPHLT-FGHGIWHCIGAPLAR 360
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 95/222 (42%), Gaps = 33/222 (14%)
Query: 80 LVDQHRNKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITLEWA 139
L+D+ R E D ++ ++ ++ Q ++Q + L + L++AG +++ +
Sbjct: 213 LIDRRRK-----EPTDDLVSALVQARDQQ-DSLSEQELLDLAIGLLVAGYESTTTQIADF 266
Query: 140 MANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNP-AAPLLIPH 198
+ L+ PE+ + L+D +L + + V E R P P
Sbjct: 267 VYLLMTRPELRRQ-------------LLDRPEL-----IPSAVEELTRWVPLGVGTAAPR 308
Query: 199 RSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDSEAHKLMPFGLG 258
+ +D T+ G + +L + A +RD + + +R + D ++ + FG G
Sbjct: 309 YAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDA-----DRIDV-DRTPNQHLGFGHG 362
Query: 259 RRACPGASLAQRLVGLTLGSLLQCFEWKRIG--EDKIDMTEG 298
C GA LA+ + + L LLQ R+G E ++ +EG
Sbjct: 363 VHHCLGAPLARVELQVALEVLLQRLPGIRLGIPETQLRWSEG 404
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 84/208 (40%), Gaps = 32/208 (15%)
Query: 77 LQGLVDQHRNKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTSAITL 136
Q L ++ NK G + +M+ H + + P+ Y +L LI+ G DT+ ++
Sbjct: 221 FQVLWNERVNKDPG-NDLISMLAHSPATRNMTPEEYLGN-----VLLLIVGGNDTTRNSM 274
Query: 137 EWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLRLNPAAPLLI 196
+ L +P+ +A L++ +V E +R PL
Sbjct: 275 TGGVLALHKNPDQFAKLKA-------NPALVE-----------TMVPEIIRWQ--TPLAH 314
Query: 197 PHRSS-DDCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCFKPERFESSDSEAHKLMPF 255
R++ D +GG + + +++ ++ +RD E+ D +PE F + + F
Sbjct: 315 MRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVID-----RPEEFIIDRPRPRQHLSF 369
Query: 256 GLGRRACPGASLAQRLVGLTLGSLLQCF 283
G G C G LA+ + + +L F
Sbjct: 370 GFGIHRCVGNRLAEMQLRILWEEILTRF 397
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 65/168 (38%), Gaps = 25/168 (14%)
Query: 113 TDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDL 172
+D++ + AG DT++ + A L P++ +A+ N
Sbjct: 275 SDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKADRN-------------- 320
Query: 173 SKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWD 232
L IV E +R + ++ D + G + L++N A + DP +
Sbjct: 321 ----LLPGIVEEAIRWTTPVQHFM-RTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFP 375
Query: 233 EPTCFKPERFESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSLL 280
EP F P R A++ + FG G C G LA+ + + L LL
Sbjct: 376 EPRKFDPTR------PANRHLAFGAGSHQCLGLHLARLEMRVLLDVLL 417
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 64/163 (39%), Gaps = 30/163 (18%)
Query: 113 TDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDL 172
T + L+ +L+ AG+DT+ + A+ L P+ RA+
Sbjct: 237 TPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRAD---------------- 280
Query: 173 SKLPYL-RNIVSETLRLNPAAPLLIPHRSSD-DCTVGGYDVPRDTTLLVNAWAIHRDPEL 230
P L RN E +R +P+ R++ D + G + +L+ + +RDP
Sbjct: 281 ---PSLARNAFEEAVRFE--SPVQTFFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRR 335
Query: 231 WDEPTCFKPERFESSDSEAHKLMPFGLGRRACPGASLAQRLVG 273
WD+P + R S + FG G C G L RL G
Sbjct: 336 WDDPDRYDITRKTSGH------VGFGSGVHMCVG-QLVARLEG 371
>pdb|2WGQ|A Chain A, Zinc Substituted E Coli Copper Amine Oxidase, A Model For
The Precursor For 2,4,5-Trihydroxyphenylalaninequinone
Formation
pdb|2WGQ|B Chain B, Zinc Substituted E Coli Copper Amine Oxidase, A Model For
The Precursor For 2,4,5-Trihydroxyphenylalaninequinone
Formation
Length = 727
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 110/302 (36%), Gaps = 39/302 (12%)
Query: 2 FSELTFNITMRMIAGKRYYGDNVEDEEEARMFRDTVKEVLAVNETSNPGDFLPFLNWIGD 61
++ + I + +RY G + +E + T + L V S G++ +WI
Sbjct: 416 YTGVPMEIPRAIAVFERYAGPEYKHQEMGQPNVSTERRELVVRWISTVGNYDYIFDWIFH 475
Query: 62 FEKRI-LRLSKTMDTILQGLVDQ--HRNKKAGLESMDTMIDHMLSLQESQPQYYTDQNIK 118
I + T ++G+ + H T+IDH + T Q+I
Sbjct: 476 ENGTIGIDAGATGIEAVKGVKAKTMHDETAKDDTRYGTLIDHNIVGT-------THQHIY 528
Query: 119 ALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSK---- 174
L L + G + S + ++ V P R QV Q + +E D ++
Sbjct: 529 NFRLDLDVDGENNSLVAMD-----PVVKPNTAGGPRTS-TMQVNQYNIGNEQDAAQKFDP 582
Query: 175 --LPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHR----DP 228
+ L N E NP + +IP+ G + V + + W HR D
Sbjct: 583 GTIRLLSNPNKENRMGNPVSYQIIPYAG------GTHPVAKGAQFAPDEWIYHRLSFMDK 636
Query: 229 ELWDEPTCFKP-ERFESSDSEAHKLMPFGLGRRACPGASL--AQRLVGLTLGS--LLQCF 283
+LW T + P ERF GLG+ + SL +V +T G+ + +
Sbjct: 637 QLW--VTRYHPGERFPEGKYPNRSTHDTGLGQYSKDNESLDNTDAVVWMTTGTTHVARAE 694
Query: 284 EW 285
EW
Sbjct: 695 EW 696
>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|B Chain B, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|C Chain C, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|D Chain D, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|E Chain E, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|F Chain F, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|G Chain G, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
pdb|3IJR|H Chain H, 2.05 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad+
Length = 291
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 15/113 (13%)
Query: 83 QHRNKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTS---AITLEWA 139
QH+NK+ G+ES+ + Q P Y + +K ++I G D+ A+++ +A
Sbjct: 16 QHQNKQPGIESLXNPLP-----QFEDPNYKGSEKLKGK--NVLITGGDSGIGRAVSIAFA 68
Query: 140 M--ANLVNH---PEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLR 187
AN+ E N + + G +C++ DLS + ++IV ET+R
Sbjct: 69 KEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVR 121
>pdb|1QLT|A Chain A, Structure Of The H422a Mutant Of The Flavoenzyme
Vanillyl-Alcohol Oxidase
pdb|1QLT|B Chain B, Structure Of The H422a Mutant Of The Flavoenzyme
Vanillyl-Alcohol Oxidase
pdb|1QLU|A Chain A, Structure Of The H422a Mutant Vanillyl-Alcohol Oxidase In
Complex With Isoeugenol
pdb|1QLU|B Chain B, Structure Of The H422a Mutant Vanillyl-Alcohol Oxidase In
Complex With Isoeugenol
Length = 560
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 66/160 (41%), Gaps = 23/160 (14%)
Query: 14 IAGKRYYGDNVEDEEEARMFRDTVKEVLAVNETSNPGDFLPFLNWIGDFEKRILRLSKTM 73
I G ++Y E RD + + + D+LP N F I ++S
Sbjct: 378 IPGVKFYFPEDTPENSVLRVRDKTMQGIPTYDELKWIDWLP--NGAALFFSPIAKVSGE- 434
Query: 74 DTILQGLVDQHRNKKAGLESMDTM------IDHMLSLQESQPQYYTDQNIKALMLTLI-- 125
D ++Q V + R ++AGL+ + T + H++ + ++ + ++ LM TLI
Sbjct: 435 DAMMQYAVTKKRCQEAGLDFIGTFTVGMREMHHIVCIVFNKKDLIQKRKVQWLMRTLIDD 494
Query: 126 ------------IAGIDTSAITLEWAMANLVNHPEVLKNA 153
+A +D T W ++ + EVLKNA
Sbjct: 495 CAANGWGEYRTHLAFMDQIMETYNWNNSSFLRFNEVLKNA 534
>pdb|1W1L|A Chain A, Structure Of The Octameric Flavoenzyme Vanillyl-Alcohol
Oxidase: Phe454tyr Mutant
pdb|1W1L|B Chain B, Structure Of The Octameric Flavoenzyme Vanillyl-Alcohol
Oxidase: Phe454tyr Mutant
Length = 560
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 66/160 (41%), Gaps = 23/160 (14%)
Query: 14 IAGKRYYGDNVEDEEEARMFRDTVKEVLAVNETSNPGDFLPFLNWIGDFEKRILRLSKTM 73
I G ++Y E RD + + + D+LP N F I ++S
Sbjct: 378 IPGVKFYFPEDTPENSVLRVRDKTMQGIPTYDELKWIDWLP--NGAHLFFSPIAKVSGE- 434
Query: 74 DTILQGLVDQHRNKKAGLESMDTM------IDHMLSLQESQPQYYTDQNIKALMLTLI-- 125
D ++Q V + R ++AGL+ + T + H++ + ++ + ++ LM TLI
Sbjct: 435 DAMMQYAVTKKRCQEAGLDYIGTFTVGMREMHHIVCIVFNKKDLIQKRKVQWLMRTLIDD 494
Query: 126 ------------IAGIDTSAITLEWAMANLVNHPEVLKNA 153
+A +D T W ++ + EVLKNA
Sbjct: 495 CAANGWGEYRTHLAFMDQIMETYNWNNSSFLRFNEVLKNA 534
>pdb|2VAO|A Chain A, Structure Of The Octameric Flavoenzyme Vanillyl-Alcohol
Oxidase In Complex With Isoeugenol
pdb|2VAO|B Chain B, Structure Of The Octameric Flavoenzyme Vanillyl-Alcohol
Oxidase In Complex With Isoeugenol
pdb|1VAO|A Chain A, Structure Of The Octameric Flavoenzyme Vanillyl-alcohol
Oxidase
pdb|1VAO|B Chain B, Structure Of The Octameric Flavoenzyme Vanillyl-alcohol
Oxidase
pdb|1AHU|A Chain A, Structure Of The Octameric Flavoenzyme Vanillyl-Alcohol
Oxidase In Complex With P-Cresol
pdb|1AHU|B Chain B, Structure Of The Octameric Flavoenzyme Vanillyl-Alcohol
Oxidase In Complex With P-Cresol
pdb|1AHV|A Chain A, Structure Of The Octameric Flavoenzyme Vanillyl-Alcohol
Oxidase In Complex With 2-Nitro-P-Cresol
pdb|1AHV|B Chain B, Structure Of The Octameric Flavoenzyme Vanillyl-Alcohol
Oxidase In Complex With 2-Nitro-P-Cresol
pdb|1AHZ|A Chain A, Structure Of The Octameric Flavoenzyme Vanillyl-Alcohol
Oxidase In Complex With 4-(1-Heptenyl)phenol
pdb|1AHZ|B Chain B, Structure Of The Octameric Flavoenzyme Vanillyl-Alcohol
Oxidase In Complex With 4-(1-Heptenyl)phenol
Length = 560
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 66/160 (41%), Gaps = 23/160 (14%)
Query: 14 IAGKRYYGDNVEDEEEARMFRDTVKEVLAVNETSNPGDFLPFLNWIGDFEKRILRLSKTM 73
I G ++Y E RD + + + D+LP N F I ++S
Sbjct: 378 IPGVKFYFPEDTPENSVLRVRDKTMQGIPTYDELKWIDWLP--NGAHLFFSPIAKVSGE- 434
Query: 74 DTILQGLVDQHRNKKAGLESMDTM------IDHMLSLQESQPQYYTDQNIKALMLTLI-- 125
D ++Q V + R ++AGL+ + T + H++ + ++ + ++ LM TLI
Sbjct: 435 DAMMQYAVTKKRCQEAGLDFIGTFTVGMREMHHIVCIVFNKKDLIQKRKVQWLMRTLIDD 494
Query: 126 ------------IAGIDTSAITLEWAMANLVNHPEVLKNA 153
+A +D T W ++ + EVLKNA
Sbjct: 495 CAANGWGEYRTHLAFMDQIMETYNWNNSSFLRFNEVLKNA 534
>pdb|1W1K|A Chain A, Structure Of The Octameric Flavoenzyme Vanillyl-Alcohol
Oxidase: Ile238thr Mutant
pdb|1W1K|B Chain B, Structure Of The Octameric Flavoenzyme Vanillyl-Alcohol
Oxidase: Ile238thr Mutant
Length = 560
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 66/160 (41%), Gaps = 23/160 (14%)
Query: 14 IAGKRYYGDNVEDEEEARMFRDTVKEVLAVNETSNPGDFLPFLNWIGDFEKRILRLSKTM 73
I G ++Y E RD + + + D+LP N F I ++S
Sbjct: 378 IPGVKFYFPEDTPENSVLRVRDKTMQGIPTYDELKWIDWLP--NGAHLFFSPIAKVSGE- 434
Query: 74 DTILQGLVDQHRNKKAGLESMDTM------IDHMLSLQESQPQYYTDQNIKALMLTLI-- 125
D ++Q V + R ++AGL+ + T + H++ + ++ + ++ LM TLI
Sbjct: 435 DAMMQYAVTKKRCQEAGLDFIGTFTVGMREMHHIVCIVFNKKDLIQKRKVQWLMRTLIDD 494
Query: 126 ------------IAGIDTSAITLEWAMANLVNHPEVLKNA 153
+A +D T W ++ + EVLKNA
Sbjct: 495 CAANGWGEYRTHLAFMDQIMETYNWNNSSFLRFNEVLKNA 534
>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|B Chain B, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|C Chain C, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|D Chain D, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|E Chain E, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|F Chain F, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|G Chain G, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
pdb|3I3O|H Chain H, 2.06 Angstrom Resolution Crystal Structure Of A Short
Chain Dehydrogenase From Bacillus Anthracis Str. 'ames
Ancestor' In Complex With Nad-acetone
Length = 291
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 15/113 (13%)
Query: 83 QHRNKKAGLESMDTMIDHMLSLQESQPQYYTDQNIKALMLTLIIAGIDTS---AITLEWA 139
QH+NK+ G+ES+ + Q P Y + +K ++I G D+ A+++ +A
Sbjct: 16 QHQNKQPGIESLMNPLP-----QFEDPNYKGSEKLKGK--NVLITGGDSGIGRAVSIAFA 68
Query: 140 M--ANLVNH---PEVLKNARAELNAQVGQECLIDESDLSKLPYLRNIVSETLR 187
AN+ E N + + G +C++ DLS + ++IV ET+R
Sbjct: 69 KEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVR 121
>pdb|1W1J|A Chain A, Structure Of The Octameric Flavoenzyme Vanillyl-Alcohol
Oxidase: The505ser Mutant
pdb|1W1J|B Chain B, Structure Of The Octameric Flavoenzyme Vanillyl-Alcohol
Oxidase: The505ser Mutant
Length = 560
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 66/160 (41%), Gaps = 23/160 (14%)
Query: 14 IAGKRYYGDNVEDEEEARMFRDTVKEVLAVNETSNPGDFLPFLNWIGDFEKRILRLSKTM 73
I G ++Y E RD + + + D+LP N F I ++S
Sbjct: 378 IPGVKFYFPEDTPENSVLRVRDKTMQGIPTYDELKWIDWLP--NGAHLFFSPIAKVSGE- 434
Query: 74 DTILQGLVDQHRNKKAGLESMDTM------IDHMLSLQESQPQYYTDQNIKALMLTLI-- 125
D ++Q V + R ++AGL+ + T + H++ + ++ + ++ LM TLI
Sbjct: 435 DAMMQYAVTKKRCQEAGLDFIGTFTVGMREMHHIVCIVFNKKDLIQKRKVQWLMRTLIDD 494
Query: 126 ------------IAGIDTSAITLEWAMANLVNHPEVLKNA 153
+A +D T W ++ + EVLKNA
Sbjct: 495 CAANGWGEYRSHLAFMDQIMETYNWNNSSFLRFNEVLKNA 534
>pdb|1E8F|A Chain A, Structure Of The H61t Mutant Of The Flavoenzyme
Vanillyl-Alcohol Oxidase In The Apo Form
pdb|1E8F|B Chain B, Structure Of The H61t Mutant Of The Flavoenzyme
Vanillyl-Alcohol Oxidase In The Apo Form
pdb|1E8G|A Chain A, Structure Of The H61t Double Mutant Of Vanillyl-Alcohol
Oxidase In Complex With Fluoro-Cresol
pdb|1E8G|B Chain B, Structure Of The H61t Double Mutant Of Vanillyl-Alcohol
Oxidase In Complex With Fluoro-Cresol
pdb|1E8H|A Chain A, Structure Of The H61t Mutant Of The Flavoenzyme Vanillyl-
Alcohol Oxidase In The Apo Form Complexed By Adp
pdb|1E8H|B Chain B, Structure Of The H61t Mutant Of The Flavoenzyme Vanillyl-
Alcohol Oxidase In The Apo Form Complexed By Adp
Length = 560
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 66/160 (41%), Gaps = 23/160 (14%)
Query: 14 IAGKRYYGDNVEDEEEARMFRDTVKEVLAVNETSNPGDFLPFLNWIGDFEKRILRLSKTM 73
I G ++Y E RD + + + D+LP N F I ++S
Sbjct: 378 IPGVKFYFPEDTPENSVLRVRDKTMQGIPTYDELKWIDWLP--NGAHLFFSPIAKVSGE- 434
Query: 74 DTILQGLVDQHRNKKAGLESMDTM------IDHMLSLQESQPQYYTDQNIKALMLTLI-- 125
D ++Q V + R ++AGL+ + T + H++ + ++ + ++ LM TLI
Sbjct: 435 DAMMQYAVTKKRCQEAGLDFIGTFTVGMREMHHIVCIVFNKKDLIQKRKVQWLMRTLIDD 494
Query: 126 ------------IAGIDTSAITLEWAMANLVNHPEVLKNA 153
+A +D T W ++ + EVLKNA
Sbjct: 495 CAANGWGEYRTHLAFMDQIMETYNWNNSSFLRFNEVLKNA 534
>pdb|1DZN|A Chain A, Asp170ser Mutant Of Vanillyl-Alcohol Oxidase
pdb|1DZN|B Chain B, Asp170ser Mutant Of Vanillyl-Alcohol Oxidase
Length = 560
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 66/160 (41%), Gaps = 23/160 (14%)
Query: 14 IAGKRYYGDNVEDEEEARMFRDTVKEVLAVNETSNPGDFLPFLNWIGDFEKRILRLSKTM 73
I G ++Y E RD + + + D+LP N F I ++S
Sbjct: 378 IPGVKFYFPEDTPENSVLRVRDKTMQGIPTYDELKWIDWLP--NGAHLFFSPIAKVSGE- 434
Query: 74 DTILQGLVDQHRNKKAGLESMDTM------IDHMLSLQESQPQYYTDQNIKALMLTLI-- 125
D ++Q V + R ++AGL+ + T + H++ + ++ + ++ LM TLI
Sbjct: 435 DAMMQYAVTKKRCQEAGLDFIGTFTVGMREMHHIVCIVFNKKDLIQKRKVQWLMRTLIDD 494
Query: 126 ------------IAGIDTSAITLEWAMANLVNHPEVLKNA 153
+A +D T W ++ + EVLKNA
Sbjct: 495 CAANGWGEYRTHLAFMDQIMETYNWNNSSFLRFNEVLKNA 534
>pdb|1W1M|A Chain A, Structure Of The Octameric Flavoenzyme Vanillyl-alcohol
Oxidase: Glu502gly Mutant
pdb|1W1M|B Chain B, Structure Of The Octameric Flavoenzyme Vanillyl-alcohol
Oxidase: Glu502gly Mutant
Length = 560
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 66/160 (41%), Gaps = 23/160 (14%)
Query: 14 IAGKRYYGDNVEDEEEARMFRDTVKEVLAVNETSNPGDFLPFLNWIGDFEKRILRLSKTM 73
I G ++Y E RD + + + D+LP N F I ++S
Sbjct: 378 IPGVKFYFPEDTPENSVLRVRDKTMQGIPTYDELKWIDWLP--NGAHLFFSPIAKVSGE- 434
Query: 74 DTILQGLVDQHRNKKAGLESMDTM------IDHMLSLQESQPQYYTDQNIKALMLTLI-- 125
D ++Q V + R ++AGL+ + T + H++ + ++ + ++ LM TLI
Sbjct: 435 DAMMQYAVTKKRCQEAGLDFIGTFTVGMREMHHIVCIVFNKKDLIQKRKVQWLMRTLIDD 494
Query: 126 ------------IAGIDTSAITLEWAMANLVNHPEVLKNA 153
+A +D T W ++ + EVLKNA
Sbjct: 495 CAANGWGGYRTHLAFMDQIMETYNWNNSSFLRFNEVLKNA 534
>pdb|4DNZ|A Chain A, The Crystal Structures Of Cyp199a4
pdb|4DNZ|B Chain B, The Crystal Structures Of Cyp199a4
pdb|4DNZ|C Chain C, The Crystal Structures Of Cyp199a4
pdb|4DNZ|D Chain D, The Crystal Structures Of Cyp199a4
pdb|4DO1|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|B Chain B, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|C Chain C, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|D Chain D, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4EGM|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGN|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGO|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGP|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
pdb|4EGP|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
Length = 410
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 66/163 (40%), Gaps = 30/163 (18%)
Query: 120 LMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDLSKLPYL- 178
L+ +L+ AG+DT+ + A+ L P L+ R++ P L
Sbjct: 242 LVRSLLSAGLDTTVNGIGAAVYCLARFPGELQRLRSD-------------------PTLA 282
Query: 179 RNIVSETLRLNPAAPLLIPHRSSD-DCTVGGYDVPRDTTLLVNAWAIHRDPELWDEPTCF 237
RN E +R +P+ R++ + +GG + +L+ + +RDP W +P +
Sbjct: 283 RNAFEEAVRFE--SPVQTFFRTTTREVELGGAVIGEGEKVLMFLGSANRDPRRWSDPDLY 340
Query: 238 KPERFESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSLL 280
R S + FG G C G L RL G + S L
Sbjct: 341 DITRKTSGH------VGFGSGVHMCVG-QLVARLEGEVMLSAL 376
>pdb|4F4C|A Chain A, The Crystal Structure Of The Multi-Drug Transporter
Length = 1321
Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 19 YYGDNVEDEEEARMFRDTVKEVLAVNETSNPGDFL------PFLNWIGDFEKRILRLSKT 72
Y GDN++ E ++ RD +EV VN+ S P + L +IG I
Sbjct: 35 YEGDNIDSNGEIKITRDAKEEV--VNKVSIPQLYRYTTTLEKLLLFIGTLVAVITGAGLP 92
Query: 73 MDTILQGLVDQ 83
+ +ILQG V Q
Sbjct: 93 LMSILQGKVSQ 103
>pdb|1A0D|A Chain A, Xylose Isomerase From Bacillus Stearothermophilus
pdb|1A0D|B Chain B, Xylose Isomerase From Bacillus Stearothermophilus
pdb|1A0D|C Chain C, Xylose Isomerase From Bacillus Stearothermophilus
pdb|1A0D|D Chain D, Xylose Isomerase From Bacillus Stearothermophilus
Length = 440
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 120 LMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQV 161
+++ +I + TS L W ANL HP + A NA V
Sbjct: 118 IIVDMIEEYMKTSKTKLLWNTANLFTHPRFVHGAATSCNADV 159
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 63/164 (38%), Gaps = 25/164 (15%)
Query: 172 LSKLPYLRNIVSETLRLNPAAPLLIPH-RSSDDCTVGGYD----VPRDTTLLVNAWAIHR 226
+ K+ +++V E LR P P+ + R+ D + +D V L R
Sbjct: 341 IEKMELTKSVVYECLRFEP--PVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATR 398
Query: 227 DPELWDEPTCFKPERFESSDSEA---HKLMPFG-------LGRRACPGASLAQRLVGLTL 276
DP+++D F PERF + E H L G +G + C G + L +
Sbjct: 399 DPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFV 458
Query: 277 GSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEVMRKACPNIH 320
+ + + D D+ G + +V +RKA + H
Sbjct: 459 IEIFRRY-------DSFDIEVGTS-PLGSSVNFSSLRKASFHHH 494
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 63/164 (38%), Gaps = 25/164 (15%)
Query: 172 LSKLPYLRNIVSETLRLNPAAPLLIPH-RSSDDCTVGGYD----VPRDTTLLVNAWAIHR 226
+ K+ +++V E LR P P+ + R+ D + +D V L R
Sbjct: 341 IEKMELTKSVVYECLRFEP--PVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATR 398
Query: 227 DPELWDEPTCFKPERFESSDSEA---HKLMPFG-------LGRRACPGASLAQRLVGLTL 276
DP+++D F PERF + E H L G +G + C G + L +
Sbjct: 399 DPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFV 458
Query: 277 GSLLQCFEWKRIGEDKIDMTEGRGITMPKAVALEVMRKACPNIH 320
+ + + D D+ G + +V +RKA + H
Sbjct: 459 IEIFRRY-------DSFDIEVGTS-PLGSSVNFSSLRKASFHHH 494
>pdb|3F41|A Chain A, Structure Of The Tandemly Repeated Protein Tyrosine
Phosphatase Like Phytase From Mitsuokella Multacida
pdb|3F41|B Chain B, Structure Of The Tandemly Repeated Protein Tyrosine
Phosphatase Like Phytase From Mitsuokella Multacida
Length = 629
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 145 NHPEVLKNARAELNAQVGQECLIDESDLSKLP 176
N EVLK+ + LNA G+ ++ E D K+P
Sbjct: 445 NKAEVLKDENSRLNAARGKSLIVAELDKDKMP 476
>pdb|3O1A|A Chain A, Structure Of Oxye (Cyp165d3), A Cytochrome P450 Involved
In Teicoplanin Biosynthesis
Length = 417
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 73/195 (37%), Gaps = 29/195 (14%)
Query: 113 TDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDL 172
+D+ + L +I + A L A+ LV HP+ + R + LID +
Sbjct: 245 SDEELAGLAEGNLIMAAEQMAAQLAVAVLLLVTHPDQMALLREKPE-------LIDSA-- 295
Query: 173 SKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWD 232
E LR P + D + G D+ L + A +R P
Sbjct: 296 ---------TEEVLRHASIVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATNRAPG--- 343
Query: 233 EPTCFKPERFESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDK 292
+RF+ + +A M FG G C GA LA+ + + L +++ F R+ +
Sbjct: 344 -------DRFDITREKATH-MAFGHGIHHCIGAPLARLQLRVALPAVVGRFPSLRLAVPE 395
Query: 293 IDMTEGRGITMPKAV 307
D+ G P AV
Sbjct: 396 EDLRFKPGRPAPFAV 410
>pdb|3OO3|A Chain A, Crystal Structure Of The Orf6 (Cyp165d3) Monooxygenase
Involved In Teicoplanin Biosynthesis
Length = 384
Score = 28.1 bits (61), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 73/195 (37%), Gaps = 29/195 (14%)
Query: 113 TDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNAQVGQECLIDESDL 172
+D+ + L +I + A L A+ LV HP+ + R + LID +
Sbjct: 212 SDEELAGLAEGNLIMAAEQMAAQLAVAVLLLVTHPDQMALLREKPE-------LIDSA-- 262
Query: 173 SKLPYLRNIVSETLRLNPAAPLLIPHRSSDDCTVGGYDVPRDTTLLVNAWAIHRDPELWD 232
E LR P + D + G D+ L + A +R P
Sbjct: 263 ---------TEEVLRHASIVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATNRAPG--- 310
Query: 233 EPTCFKPERFESSDSEAHKLMPFGLGRRACPGASLAQRLVGLTLGSLLQCFEWKRIGEDK 292
+RF+ + +A M FG G C GA LA+ + + L +++ F R+ +
Sbjct: 311 -------DRFDITREKATH-MAFGHGIHHCIGAPLARLQLRVALPAVVGRFPSLRLAVPE 362
Query: 293 IDMTEGRGITMPKAV 307
D+ G P AV
Sbjct: 363 EDLRFKPGRPAPFAV 377
>pdb|2AJ4|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Galactokinase In Complex With Galactose And Mg:amppnp
pdb|2AJ4|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Galactokinase In Complex With Galactose And Mg:amppnp
Length = 548
Score = 27.7 bits (60), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 16/91 (17%)
Query: 46 TSNPGDFLPFLN------------WIGDFEKRILRLSKTMDTILQGLVDQHRNKKAGLES 93
++N G+ F+N W GD E I RL+K + + + L NKK G
Sbjct: 324 STNKGNLRDFMNVYYARYHNISTPWNGDIESGIERLTKMLVLVEESLA----NKKQGFSV 379
Query: 94 MDTMIDHMLSLQESQPQYYTDQNIKALMLTL 124
D S +E Y T ++ +L L
Sbjct: 380 DDVAQSLNCSREEFTRDYLTTSPVRFQVLKL 410
>pdb|3H02|A Chain A, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|B Chain B, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|C Chain C, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|D Chain D, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|E Chain E, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|F Chain F, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium
Length = 288
Score = 27.7 bits (60), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 110 QYYTDQNIKALMLTLIIAGIDTSAITLEWAMANLVNHPEVLKNARAELNA 159
QY Q + ++ ++ D T+ W L N P L+ +A LNA
Sbjct: 192 QYDAQQALDXGLVNTVVPLADLEKETVRWCREXLQNSPXALRCLKAALNA 241
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,768,496
Number of Sequences: 62578
Number of extensions: 393683
Number of successful extensions: 1330
Number of sequences better than 100.0: 221
Number of HSP's better than 100.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 90
Number of HSP's that attempted gapping in prelim test: 996
Number of HSP's gapped (non-prelim): 227
length of query: 334
length of database: 14,973,337
effective HSP length: 99
effective length of query: 235
effective length of database: 8,778,115
effective search space: 2062857025
effective search space used: 2062857025
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)