BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019899
(334 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-
Aminoethoxyvinylglycine
pdb|1M4N|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
[2-(Amino-
Oxy)ethyl](5'-Deoxyadenosin-5'-Yl)(Methyl)sulfonium
Length = 435
Score = 363 bits (932), Expect = e-101, Method: Compositional matrix adjust.
Identities = 158/332 (47%), Positives = 234/332 (70%), Gaps = 5/332 (1%)
Query: 1 MAGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRF 60
M FM+++ G V+FDP+ +VLTAGAT A E FCLAD G A+L+P+PYYPGFDRD+++
Sbjct: 95 MVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKW 154
Query: 61 RTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLY 120
RTGVE++P+HC S++ F + TAL++A+ +A KR ++V+G+L+ NP+NP+G + R LY
Sbjct: 155 RTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELY 214
Query: 121 ELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKD-----RVHIIYGLSKD 175
LL F +K IH+ISDEIY G+ F + F+S+ E+L+ D++ RVH++Y LSKD
Sbjct: 215 LLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKD 274
Query: 176 LSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRI 235
L LPGFR G IYS ++ V+AAA K++ F +S+ TQ LL +MLSD K + Y+ N +R+
Sbjct: 275 LGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRL 334
Query: 236 KKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTP 295
K+ V+GL++ GI C +AGL+CW DM L+ S + + E+ELW K++ +N++P
Sbjct: 335 KQRQKKLVSGLQKSGISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISP 394
Query: 296 GSACHCIEPGWFRCCFTSLTHEDIPLVIERIQ 327
GS+CHC EPGWFR CF +L + L ++R++
Sbjct: 395 GSSCHCTEPGWFRVCFANLPERTLDLAMQRLK 426
>pdb|1B8G|A Chain A, 1-aminocyclopropane-1-carboxylate Synthase
pdb|1B8G|B Chain B, 1-aminocyclopropane-1-carboxylate Synthase
Length = 429
Score = 363 bits (931), Expect = e-101, Method: Compositional matrix adjust.
Identities = 158/332 (47%), Positives = 234/332 (70%), Gaps = 5/332 (1%)
Query: 1 MAGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRF 60
M FM+++ G V+FDP+ +VLTAGAT A E FCLAD G A+L+P+PYYPGFDRD+++
Sbjct: 93 MVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKW 152
Query: 61 RTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLY 120
RTGVE++P+HC S++ F + TAL++A+ +A KR ++V+G+L+ NP+NP+G + R LY
Sbjct: 153 RTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELY 212
Query: 121 ELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKD-----RVHIIYGLSKD 175
LL F +K IH+ISDEIY G+ F + F+S+ E+L+ D++ RVH++Y LSKD
Sbjct: 213 LLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKD 272
Query: 176 LSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRI 235
L LPGFR G IYS ++ V+AAA K++ F +S+ TQ LL +MLSD K + Y+ N +R+
Sbjct: 273 LGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRL 332
Query: 236 KKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTP 295
K+ V+GL++ GI C +AGL+CW DM L+ S + + E+ELW K++ +N++P
Sbjct: 333 KQRQKKLVSGLQKSGISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISP 392
Query: 296 GSACHCIEPGWFRCCFTSLTHEDIPLVIERIQ 327
GS+CHC EPGWFR CF +L + L ++R++
Sbjct: 393 GSSCHCTEPGWFRVCFANLPERTLDLAMQRLK 424
>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
L-Vinylglycine
Length = 473
Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust.
Identities = 158/332 (47%), Positives = 234/332 (70%), Gaps = 5/332 (1%)
Query: 1 MAGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRF 60
M FM+++ G V+FDP+ +VLTAGAT A E FCLAD G A+L+P+PYYPGFDRD+++
Sbjct: 95 MVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKW 154
Query: 61 RTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLY 120
RTGVE++P+HC S++ F + TAL++A+ +A KR ++V+G+L+ NP+NP+G + R LY
Sbjct: 155 RTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELY 214
Query: 121 ELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKD-----RVHIIYGLSKD 175
LL F +K IH+ISDEIY G+ F + F+S+ E+L+ D++ RVH++Y LSKD
Sbjct: 215 LLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKD 274
Query: 176 LSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRI 235
L LPGFR G IYS ++ V+AAA K++ F +S+ TQ LL +MLSD K + Y+ N +R+
Sbjct: 275 LGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRL 334
Query: 236 KKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTP 295
K+ V+GL++ GI C +AGL+CW DM L+ S + + E+ELW K++ +N++P
Sbjct: 335 KQRQKKLVSGLQKSGISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISP 394
Query: 296 GSACHCIEPGWFRCCFTSLTHEDIPLVIERIQ 327
GS+CHC EPGWFR CF +L + L ++R++
Sbjct: 395 GSSCHCTEPGWFRVCFANLPERTLDLAMQRLK 426
>pdb|3PIU|A Chain A, High-Resolution Structure Of Native Malus Domestica Acc
Synthase
Length = 410
Score = 356 bits (914), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 158/328 (48%), Positives = 232/328 (70%), Gaps = 3/328 (0%)
Query: 1 MAGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRF 60
M FM+++ G V+FDP+ +VLTAGAT A E FCLAD G A+L+P+PYYPGFDRD+++
Sbjct: 78 MVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKW 137
Query: 61 RTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLY 120
RTGVE++P+HC S++ F + TAL++A+ +A KR ++V+G+L+ NP+NP+G + R LY
Sbjct: 138 RTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELY 197
Query: 121 ELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLS-KDLSLP 179
LL F +K IH+ISDEIY G+ F + F+S+ E+L+ E RVH++Y LS KDL LP
Sbjct: 198 LLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDEVW--QRVHVVYSLSXKDLGLP 255
Query: 180 GFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLY 239
GFR G IYS ++ V+AAA K++ F +S+ TQ LL +MLSD K + Y+ N +R+K+
Sbjct: 256 GFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQ 315
Query: 240 DSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSAC 299
V+GL++ GI C +AGL+CW DM L+ S + + E+ELW K++ +N++PGS+C
Sbjct: 316 KKLVSGLQKSGISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSC 375
Query: 300 HCIEPGWFRCCFTSLTHEDIPLVIERIQ 327
HC EPGWFR CF +L + L ++R++
Sbjct: 376 HCTEPGWFRVCFANLPERTLDLAMQRLK 403
>pdb|1IAX|A Chain A, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAX|B Chain B, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAY|A Chain A, Crystal Structure Of Acc Synthase Complexed With Cofactor
Plp And Inhibitor Avg
Length = 428
Score = 338 bits (868), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 148/331 (44%), Positives = 228/331 (68%), Gaps = 3/331 (0%)
Query: 1 MAGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRF 60
+A FM + G V FDP ++V+ GAT A E + FCLAD G+A LVPSPYYP F+RD+R+
Sbjct: 92 IAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRW 151
Query: 61 RTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLY 120
RTGV+LIP+HC S++NF + A+ +A+ A+K +KV+G+++ NP+NP+G + ++TL
Sbjct: 152 RTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLK 211
Query: 121 ELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV---DKDRVHIIYGLSKDLS 177
+L F + NIH++ DEIY ++F +FVS+AEIL+ +E+ +KD VHI+Y LSKD+
Sbjct: 212 SVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMG 271
Query: 178 LPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237
LPGFR G+IYS+N+ V+ A+K++ F +S TQ L +MLSD KF+ +L + R+ K
Sbjct: 272 LPGFRVGIIYSFNDDVVNCARKMSSFGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGK 331
Query: 238 LYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGS 297
+ F GL+ +GI+C +++AGL+CW D+ L+ + E+ LW ++N K+NV+PGS
Sbjct: 332 RHKHFTNGLEVVGIKCLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGS 391
Query: 298 ACHCIEPGWFRCCFTSLTHEDIPLVIERIQK 328
+ C EPGWFR CF ++ + + + RI++
Sbjct: 392 SFECQEPGWFRVCFANMDDGTVDIALARIRR 422
>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
pdb|1O4S|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
Length = 389
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 148/314 (47%), Gaps = 34/314 (10%)
Query: 17 PSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDN 76
P Q+V+T GA A+ L D G+ ++V SP + + I G + V + N
Sbjct: 101 PDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNV-VETFMSKN 159
Query: 77 FAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISD 136
F S+ ++ K + +LI +P NP G + RE L L+ A+++N ++ISD
Sbjct: 160 FQPSLEEVEGLLVG------KTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISD 213
Query: 137 EIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAA 196
E+Y ++ +EF S+ ++ E DR+ I G SK S+ G+R G + S +E V A
Sbjct: 214 EVYDSLVY-TDEFTSILDVSEG----FDRIVYINGFSKSHSMTGWRVGYLIS-SEKVATA 267
Query: 197 AKKL---TRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRC 253
K+ T C + L ++ D ++ + + K + V LK++G++
Sbjct: 268 VSKIQSHTTSCINTVAQYAALKALEVDNSYMVQTFKERKNFV-------VERLKKMGVKF 320
Query: 254 SESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS 313
E Y + + G +++ ++LL K+ + PGSA ++PG+ R F +
Sbjct: 321 VEPEGAFYLFFKVRG--------DDVKFCERLLEEKKVALVPGSA--FLKPGFVRLSFAT 370
Query: 314 LTHEDIPLVIERIQ 327
+ E + ++RI+
Sbjct: 371 -SIERLTEALDRIE 383
>pdb|3TCM|A Chain A, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
pdb|3TCM|B Chain B, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
Length = 500
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 149/333 (44%), Gaps = 33/333 (9%)
Query: 20 IVLTAGATPAVEILC-FCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFA 78
I LT GA+P V ++ + + + +LVP P YP + I G L+P + + +
Sbjct: 160 IFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIALHGGA-LVPYYLNESTGWG 218
Query: 79 FSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEI 138
+ + + AR RG+ VR +++ NP NP G ++ E Y+++ F + + + +++DE+
Sbjct: 219 LETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEV 278
Query: 139 YGGSIF-GNEEFVSMAEILEAEEVDKDRVHII--YGLSKDLSLP-GFRTGV--IYSYNES 192
Y +I+ N++F S +I+ + ++ + ++ +SK G R G I ++
Sbjct: 279 YQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAP 338
Query: 193 VLAAAKKLTRFCSISAPTQRLLISML------SDTKFIQEYLETN------KRRIKKLYD 240
V K+ S T ++L S++ SD + E + RR K L
Sbjct: 339 VREQIYKIASVNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEH 398
Query: 241 SFVAGLKQLGIRCSESSAGLY-----CWADMSGLIPSYSEKGELELWD-KLLNIAKINVT 294
+F K GI C+E+ +Y C + + K + +LL I V
Sbjct: 399 AFN---KLEGITCNEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVV 455
Query: 295 PGSACHCIEPGW-FRCCFTSLTHED-IPLVIER 325
PGS + W FRC T L ED IP VI R
Sbjct: 456 PGSGFGQVPGTWHFRC--TILPQEDKIPAVISR 486
>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|E Chain E, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|F Chain F, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|G Chain G, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|H Chain H, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|5BJ4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
pdb|5BJ4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
Length = 385
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 142/319 (44%), Gaps = 26/319 (8%)
Query: 13 VSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCR 72
+S P + ++T G + A+ L + D G+ ++V SPY+ + +RF GV ++ V
Sbjct: 87 LSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGV-VVEVETL 145
Query: 73 STDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIH 132
+ F + +A + + +++ +P NP G + P+E L L A E + +
Sbjct: 146 PEEGFVPDPERVRRAITP------RTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFY 199
Query: 133 VISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNES 192
++SDEIY ++ E F V + + G +K ++ G+R G E
Sbjct: 200 LVSDEIYEHLLYEGEHF-------SPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKE- 251
Query: 193 VLAAAKKLTRFCSISAPT--QRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLG 250
V+ A ++R + S T Q + L++ + + ++E + ++ D + GL LG
Sbjct: 252 VIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALG 311
Query: 251 IRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCC 310
++ S Y D S + P E+ ++LL A + V PG+ G R
Sbjct: 312 LKAVRPSGAFYVLMDTSPIAPD-----EVRAAERLLE-AGVAVVPGTDFAAF--GHVRLS 363
Query: 311 FTSLTHEDIPLVIERIQKV 329
+ + + E++ +ER +V
Sbjct: 364 YAT-SEENLRKALERFARV 381
>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1GCK|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1B5P|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
pdb|1B5P|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
Length = 385
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 142/319 (44%), Gaps = 26/319 (8%)
Query: 13 VSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCR 72
+S P + ++T G + A+ L + D G+ ++V SPY+ + +RF GV ++ V
Sbjct: 87 LSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGV-VVEVETL 145
Query: 73 STDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIH 132
+ F + +A + + +++ +P NP G + P+E L L A E + +
Sbjct: 146 PEEGFVPDPERVRRAITP------RTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFY 199
Query: 133 VISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNES 192
++SDEIY ++ E F V + + G +K ++ G+R G E
Sbjct: 200 LVSDEIYEHLLYEGEHF-------SPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKE- 251
Query: 193 VLAAAKKLTRFCSISAPT--QRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLG 250
V+ A ++R + S T Q + L++ + + ++E + ++ D + GL LG
Sbjct: 252 VIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALG 311
Query: 251 IRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCC 310
++ S Y D S + P E+ ++LL A + V PG+ G R
Sbjct: 312 LKAVRPSGAFYVLMDTSPIAPD-----EVRAAERLLE-AGVAVVPGTDFAAF--GHVRLS 363
Query: 311 FTSLTHEDIPLVIERIQKV 329
+ + + E++ +ER +V
Sbjct: 364 YAT-SEENLRKALERFARV 381
>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
Length = 385
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 142/319 (44%), Gaps = 26/319 (8%)
Query: 13 VSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCR 72
+S P + ++T G + A+ L + D G+ ++V SPY+ + +RF GV ++ V
Sbjct: 87 LSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGV-VVEVETL 145
Query: 73 STDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIH 132
+ F + +A + + +++ +P NP G + P+E L L A E + +
Sbjct: 146 PEEGFVPDPERVRRAITP------RTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFY 199
Query: 133 VISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNES 192
++SDEIY ++ E F V + + G +K ++ G+R G E
Sbjct: 200 LVSDEIYEHLLYEGEHF-------SPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKE- 251
Query: 193 VLAAAKKLTRFCSISAPT--QRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLG 250
V+ A ++R + S T Q + L++ + + ++E + ++ D + GL LG
Sbjct: 252 VIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALG 311
Query: 251 IRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCC 310
++ S Y D S + P E+ ++LL A + V PG+ G R
Sbjct: 312 LKAVRPSGAFYVLMDTSPIAPD-----EVRAAERLLE-AGVAVVPGTDFAAF--GHVRLS 363
Query: 311 FTSLTHEDIPLVIERIQKV 329
+ + + E++ +ER +V
Sbjct: 364 YAT-SEENLRKALERFARV 381
>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
pdb|1B5O|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
Length = 385
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 142/320 (44%), Gaps = 28/320 (8%)
Query: 13 VSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCR 72
+S P + ++T G + A+ L + D G+ ++V SPY+ + +RF GV ++ V
Sbjct: 87 LSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGV-VVEVETL 145
Query: 73 STDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIH 132
+ F + +A + + +++ +P NP G + P+E L L A E + +
Sbjct: 146 PEEGFVPDPERVRRAITP------RTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFY 199
Query: 133 VISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNES 192
++SDEIY ++ E F V + + G +K ++ G+R G E
Sbjct: 200 LVSDEIYEHLLYEGEHF-------SPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEV 252
Query: 193 VLAAAKKLTRFCSISAP---TQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL 249
+ A A ++ S ++P Q + L++ + + ++E + ++ D + GL L
Sbjct: 253 IKAMASVSSQ--STTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL 310
Query: 250 GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRC 309
G++ S Y D S + P E+ ++LL A + V PG+ G R
Sbjct: 311 GLKAVRPSGAFYVLMDTSPIAPD-----EVRAAERLLE-AGVAVVPGTDFAAF--GHVRL 362
Query: 310 CFTSLTHEDIPLVIERIQKV 329
+ + + E++ +ER +V
Sbjct: 363 SYAT-SEENLRKALERFARV 381
>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii
Reveals Its Similarity In The Active Site To Kynurenine
Aminotransferases
Length = 370
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 149/316 (47%), Gaps = 42/316 (13%)
Query: 17 PSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDN 76
P I++T G++ + + D G+ +L+ +P YP + IRF PV C
Sbjct: 89 PDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAK---PVFC----- 140
Query: 77 FAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISD 136
F++ +L++A + K + I+I +P+NP+G +I R E+ +FA E ++ISD
Sbjct: 141 -DFTVESLEEALSD------KTKAIIINSPSNPLGEVIDR----EIYEFAYENIPYIISD 189
Query: 137 EIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAA 196
EIY G ++ + + + +E +E + ++ +I G S ++ G+R G + S N+ ++ A
Sbjct: 190 EIYNGLVYEGKCYSA----IEFDE-NLEKTILINGFSXLYAMTGWRIGYVIS-NDEIIEA 243
Query: 197 AKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDS----FVAGLKQLGIR 252
KL + ISAPT IS + K ++ E + K +D + +K G
Sbjct: 244 ILKLQQNLFISAPT----ISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDFGWE 299
Query: 253 CSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFT 312
+ Y + P+ E G E KLL + +TPG + R +
Sbjct: 300 VNNPIGAYYVF-------PNIGEDGR-EFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA 351
Query: 313 SLTHEDIPLVIERIQK 328
+ ++E+I +ERI++
Sbjct: 352 N-SYENIKEGLERIKE 366
>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
pdb|1V2E|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2E|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2F|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
pdb|1V2F|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
Length = 381
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 143/337 (42%), Gaps = 37/337 (10%)
Query: 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGV 64
+ + L + + +P +V+T+GAT A+ +L L G+ ++V P++ + D F G
Sbjct: 66 LREALAEEFAVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDA-FLAGA 124
Query: 65 ELIPVHCRST-DNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELL 123
+ V T + F ++AL++A + R +L+ P NP G + L +
Sbjct: 125 KARLVRLDLTPEGFRLDLSALEKALTP------RTRALLLNTPMNPTGLVFGERELEAIA 178
Query: 124 DFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRT 183
AR ++ +ISDE+Y +G E +R + K L G+R
Sbjct: 179 RLARAHDLFLISDEVYDELYYGERP-------RRLREFAPERTFTVGSAGKRLEATGYRV 231
Query: 184 GVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQE--YLETNKRRIKKLYDS 241
G I E + + ++ S SAPT L + K + + E + ++ D
Sbjct: 232 GWIVGPKE-FMPRLAGMRQWTSFSAPTP-LQAGVAEALKLARREGFYEALREGYRRRRDL 289
Query: 242 FVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWD--KLLNIAKINVTPGSAC 299
GL+ +G+R + A++ G WD +L+ A++ + P SA
Sbjct: 290 LAGGLRAMGLRVYVPEGTYFLMAELPG-------------WDAFRLVEEARVALIPASAF 336
Query: 300 HCIEP--GWFRCCFTSLTHEDIPLVIERIQKVAETCK 334
+ +P FR F T E++ L +ER+ +V + +
Sbjct: 337 YLEDPPKDLFRFAFCK-TEEELHLALERLGRVVNSPR 372
>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|C Chain C, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|D Chain D, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
Length = 385
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 141/320 (44%), Gaps = 28/320 (8%)
Query: 13 VSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCR 72
+S P + ++T G A+ L + D G+ ++V SPY+ + +RF GV ++ V
Sbjct: 87 LSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGV-VVEVETL 145
Query: 73 STDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIH 132
+ F + +A + + +++ +P NP G + P+E L L A E + +
Sbjct: 146 PEEGFVPDPERVRRAITP------RTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFY 199
Query: 133 VISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNES 192
++SDEIY ++ E F V + + G +K ++ G+R G E
Sbjct: 200 LVSDEIYEHLLYEGEHF-------SPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEV 252
Query: 193 VLAAAKKLTRFCSISAP---TQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL 249
+ A A ++ S ++P Q + L++ + + ++E + ++ D + GL L
Sbjct: 253 IKAMASVSSQ--STTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL 310
Query: 250 GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRC 309
G++ S Y D S + P E+ ++LL A + V PG+ G R
Sbjct: 311 GLKAVRPSGAFYVLMDTSPIAPD-----EVRAAERLLE-AGVAVVPGTDFAAF--GHVRL 362
Query: 310 CFTSLTHEDIPLVIERIQKV 329
+ + + E++ +ER +V
Sbjct: 363 SYAT-SEENLRKALERFARV 381
>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus
pdb|1BJW|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus
Length = 382
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 140/320 (43%), Gaps = 28/320 (8%)
Query: 13 VSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCR 72
+S P + ++T G A+ L + D G+ ++V SPY+ + +RF GV ++ V
Sbjct: 87 LSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGV-VVEVETL 145
Query: 73 STDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIH 132
+ F + +A + + +++ +P NP G + P+E L L A E + +
Sbjct: 146 PEEGFVPDPERVRRAITP------RTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFY 199
Query: 133 VISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNES 192
++SDEIY ++ E F V + + G + ++ G+R G E
Sbjct: 200 LVSDEIYEHLLYEGEHF-------SPGRVAPEHTLTVNGAAXAFAMTGWRIGYACGPKEV 252
Query: 193 VLAAAKKLTRFCSISAP---TQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL 249
+ A A ++ S ++P Q + L++ + + ++E + ++ D + GL L
Sbjct: 253 IKAMASVSSQ--STTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL 310
Query: 250 GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRC 309
G++ S Y D S + P E+ ++LL A + V PG+ G R
Sbjct: 311 GLKAVRPSGAFYVLMDTSPIAPD-----EVRAAERLLE-AGVAVVPGTDFAAF--GHVRL 362
Query: 310 CFTSLTHEDIPLVIERIQKV 329
+ + + E++ +ER +V
Sbjct: 363 SYAT-SEENLRKALERFARV 381
>pdb|2GB3|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|C Chain C, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|D Chain D, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|E Chain E, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|F Chain F, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
Length = 409
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 124/260 (47%), Gaps = 24/260 (9%)
Query: 11 QAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVH 70
Q V P +++T G + A+ +A+ G+ +LV P+Y ++ + GV+LIPV
Sbjct: 96 QRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKI-AGVKLIPVT 154
Query: 71 CRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKN 130
R + FA L+ N+ + +GI++ NP NP G + ++ L++ A
Sbjct: 155 RRXEEGFAIP-QNLESFINE------RTKGIVLSNPCNPTGVVYGKDEXRYLVEIAERHG 207
Query: 131 IHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYN 190
+ +I DE+Y E V E A ++ D+V +I +S S G R G + + N
Sbjct: 208 LFLIVDEVYS-------EIVFRGEFASALSIESDKVVVIDSVSXKFSACGARVGCLITRN 260
Query: 191 ESVLAAAKKLTRFCSISAPTQRLL--ISMLS-DTKFIQEYLETNKRRIKKLYDSFVAGLK 247
E +++ A KL + ++ P + + +L+ D F ET + R+ ++ + L+
Sbjct: 261 EELISHAXKLAQ-GRLAPPLLEQIGSVGLLNLDDSFFDFVRETYRERV----ETVLKKLE 315
Query: 248 QLGI-RCSESSAGLYCWADM 266
+ G+ R ++ S Y A++
Sbjct: 316 EHGLKRFTKPSGAFYITAEL 335
>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|B Chain B, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|C Chain C, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|D Chain D, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
Length = 412
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 23/288 (7%)
Query: 13 VSFDP-SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHC 71
V DP S+ ++T G+ + L DHG+ +LVP+P YP I G +
Sbjct: 94 VQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYP-----IHI-YGAVIAGAQV 147
Query: 72 RSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNI 131
RS I ++ R+ K R +++ P+NP + + ++ A++ ++
Sbjct: 148 RSV-PLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDV 206
Query: 132 HVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNE 191
V+ D Y ++ + S+ ++ A+++ + + LSK ++ G+R G + E
Sbjct: 207 MVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVE----FFTLSKSYNMAGWRIGFMVGNPE 262
Query: 192 --SVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL 249
S LA K + + + P Q I+ L Q+ + R+ ++ D V GL++
Sbjct: 263 LVSALARIKSYHDYGTFT-PLQVAAIAALEGD---QQCVRDIARQYQQRRDVLVKGLREA 318
Query: 250 GIRCSESSAGLYCWADMSGLIPS-YSEKGELELWDKLLNIAKINVTPG 296
G A +Y WA IP Y+ G LE KLL AK++V+PG
Sbjct: 319 GWMVENPKASMYVWAK----IPEPYAHLGSLEFAKKLLQDAKVSVSPG 362
>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|B Chain B, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|C Chain C, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|D Chain D, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
Length = 406
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 139/310 (44%), Gaps = 31/310 (10%)
Query: 11 QAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVH 70
V P + +TA T A++++ L D G+ +LVP P YP + ++F G PV
Sbjct: 95 NGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGK---PVE 151
Query: 71 CRSTDNFAFSITALDQAFNQARKRGV-KVRGILICNPANPVGNIIPRETLYELLDFAREK 129
R+ + + + RK+ + + I + NP NP G + ++TL E+L+ A E
Sbjct: 152 YRTIEEEDWQ-----PDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEY 206
Query: 130 NIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKD-RVHIIYGLSKDLSLPGFRTGVIYS 188
I VISDEIY + E + + KD V ++ GLSK G+R G +Y
Sbjct: 207 EIPVISDEIYDLMTYEGEH-------ISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYF 259
Query: 189 YN-ESVLAAAKK-LTRFCSI----SAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSF 242
+ E+ L+ ++ + R I + P Q I+ L+ +YL+ +++K+ D
Sbjct: 260 VDPENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLTGP---MDYLKEYMKKLKERRDYI 316
Query: 243 VAGLKQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHC 301
L ++ GI ++ Y + + + P ++K E +L+ A + GS
Sbjct: 317 YKRLNEIPGISTTKPQGAFYIFPKIE-VGPWKNDK---EFVLDVLHNAHVLFVHGSGFGE 372
Query: 302 IEPGWFRCCF 311
G FR F
Sbjct: 373 YGAGHFRAVF 382
>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
pdb|1DJU|B Chain B, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
Length = 388
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 144/333 (43%), Gaps = 34/333 (10%)
Query: 11 QAVSFDP-SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPV 69
+ DP ++I++ GA A + G +L+P+P + + + G + + V
Sbjct: 79 NGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAV-ILAGGKPVEV 137
Query: 70 HCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK 129
D F ++ L + K R ++I +P NP G ++ ++ L E+ DF E
Sbjct: 138 PTYEEDEFRLNVDELKKYVTD------KTRALIINSPCNPTGAVLTKKDLEEIADFVVEH 191
Query: 130 NIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSY 189
++ VISDE+Y I+ + S+A + E R + G SK ++ G+R G + +
Sbjct: 192 DLIVISDEVYEHFIYDDARHYSIASLDGMFE----RTITVNGFSKTFAMTGWRLGFVAAP 247
Query: 190 NESVLAAAKKLTRFCSISAP-----TQRLLISMLSDT---KFIQEYLETNKRRIKKLYDS 241
+ + +++ +F +A Q L D K ++E + RR K ++
Sbjct: 248 SWII----ERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKR 303
Query: 242 FVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHC 301
L ++G+ + Y + + + + EL +L A++ V PGSA
Sbjct: 304 ----LNEMGLPTVKPKGAFYIFPRIRDTGLTSKKFSEL-----MLKEARVAVVPGSAFGK 354
Query: 302 IEPGWFRCCFTSLTHEDIPLVIERIQKVAETCK 334
G+ R + + +E + +ER+++V + K
Sbjct: 355 AGEGYVRISYAT-AYEKLEEAMERMERVLKERK 386
>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GDE|B Chain B, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GD9|A Chain A, Crystall Structure Of Pyrococcus Protein-A1
pdb|1GD9|B Chain B, Crystall Structure Of Pyrococcus Protein-A1
Length = 389
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 144/333 (43%), Gaps = 34/333 (10%)
Query: 11 QAVSFDP-SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPV 69
+ DP ++I++ GA A + G +L+P+P + + + G + + V
Sbjct: 80 NGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAV-ILAGGKPVEV 138
Query: 70 HCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK 129
D F ++ L + K R ++I +P NP G ++ ++ L E+ DF E
Sbjct: 139 PTYEEDEFRLNVDELKKYVTD------KTRALIINSPCNPTGAVLTKKDLEEIADFVVEH 192
Query: 130 NIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSY 189
++ VISDE+Y I+ + S+A + E R + G SK ++ G+R G + +
Sbjct: 193 DLIVISDEVYEHFIYDDARHYSIASLDGMFE----RTITVNGFSKTFAMTGWRLGFVAAP 248
Query: 190 NESVLAAAKKLTRFCSISAP-----TQRLLISMLSDT---KFIQEYLETNKRRIKKLYDS 241
+ + +++ +F +A Q L D K ++E + RR K ++
Sbjct: 249 SWII----ERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKR 304
Query: 242 FVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHC 301
L ++G+ + Y + + + + EL +L A++ V PGSA
Sbjct: 305 ----LNEMGLPTVKPKGAFYIFPRIRDTGLTSKKFSEL-----MLKEARVAVVPGSAFGK 355
Query: 302 IEPGWFRCCFTSLTHEDIPLVIERIQKVAETCK 334
G+ R + + +E + ++R+++V + K
Sbjct: 356 AGEGYVRISYAT-AYEKLEEAMDRMERVLKERK 387
>pdb|3B1C|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1D|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1E|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
Length = 392
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 67/135 (49%), Gaps = 6/135 (4%)
Query: 14 SFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRS 73
SFD IV G PA+ I G A+L+ SP YP F R +R + +
Sbjct: 86 SFDKEDIVFVEGVVPAISIAIQAFTKEGEAVLINSPVYPPFARSVRLNN--RKLVSNSLK 143
Query: 74 TDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHV 133
+N F I +Q N + VK+ L+CNP NP G + RE L ++ ++ ++ +
Sbjct: 144 EENGLFQID-FEQLENDIVENDVKL--YLLCNPHNPGGRVWEREVLEQIGHLCQKHHVIL 200
Query: 134 ISDEIYGG-SIFGNE 147
+SDEI+ ++FG+E
Sbjct: 201 VSDEIHQDLTLFGHE 215
>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase
Length = 402
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 154/333 (46%), Gaps = 49/333 (14%)
Query: 20 IVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAF 79
++LT+G + A+E+ LA+ G +L+P P + + R + G+E+ + ++
Sbjct: 98 VILTSGCSQAIELCLAVLANPGQNILIPRPGFSLY-RTLAESMGIEVKLYNLLPEKSWEI 156
Query: 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIY 139
+ L+ ++ K +++ NP+NP G++ + L ++L A + + +++DEIY
Sbjct: 157 DLKQLESLIDE------KTACLVVNNPSNPCGSVFSKRHLQKILAVAERQCVPILADEIY 210
Query: 140 GGSIFGNEEFVSMAEILEAEEVDKDRVHIIY--GLSKDLSLPGFRTGVIYSYN------- 190
G +F + ++ MA + V I+ GL+ +PG+R G I ++
Sbjct: 211 GDMVFSDCKYEPMATL-------STNVPILSCGGLAXRWLVPGWRLGWILIHDRRDIFGN 263
Query: 191 ---ESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLK 247
+ ++ ++++ C+I Q L S+L T QE+ + +K D L
Sbjct: 264 EIRDGLVKLSQRILGPCTI---VQGALKSILQRTP--QEFYQDTLSFLKSNADLCYGALS 318
Query: 248 QL-GIRCSESSAGLYCWADMSGL-IPSYSE-KGELELWDKLLNIAKINVTPGSACHCIE- 303
+ G++ S +Y M G+ + + E + ++E ++L+ ++ P + C E
Sbjct: 319 AIPGLQPVRPSGAMYL---MVGIEMEHFPEFENDVEFTERLIAEQSVHCLPAT---CFEY 372
Query: 304 PGWFRCCFTSLTHEDIP--LVIERIQKVAETCK 334
P +FR T +P +++E ++ E C+
Sbjct: 373 PNFFRVVIT------VPEVMMLEACSRIQEFCE 399
>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|B Chain B, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|C Chain C, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|D Chain D, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
Length = 398
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 132/329 (40%), Gaps = 56/329 (17%)
Query: 1 MAGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCF--CLADHGNALLVPSPYYPGFDRDI 58
+A F++ G F+ + T GA ++ I CF +D + + +PY+P + +
Sbjct: 85 IAEFLNNTHG--THFNADNLYXTXGAAASLSI-CFRALTSDAYDEFITIAPYFPEYKVFV 141
Query: 59 RFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRET 118
G L+ V T++F AL++ N RG++I +P NP G + ET
Sbjct: 142 N-AAGARLVEVPA-DTEHFQIDFDALEERIN------AHTRGVIINSPNNPSGTVYSEET 193
Query: 119 LYELLDFAREKN------IHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGL 172
+ +L D +K+ I +I+DE Y ++ + + + D + Y
Sbjct: 194 IKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYY-------DNTLVCYSY 246
Query: 173 SKDLSLPGFRTGVIYSYNE---------SVLAAAKKLTRFCSISAPTQRLLISMLSDTKF 223
SK LSLPG R G + +E +V A + L C+ S Q+ ++ T
Sbjct: 247 SKSLSLPGERIGYVLVPDEVYDKAELYAAVCGAGRALGYVCAPSL-FQKXIVKCQGATGD 305
Query: 224 IQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWAD-MSGLIPSYSEKGELELW 282
I Y E D GL ++G C + Y + + ++ EK + E
Sbjct: 306 INAYKENR--------DLLYEGLTRIGYHCFKPDGAFYXFVKALEDDSNAFCEKAKEE-- 355
Query: 283 DKLLNIAKINVTPGSACHCIEPGWFRCCF 311
D L+ A G C PGW R +
Sbjct: 356 DVLIVAAD-----GFGC----PGWVRISY 375
>pdb|1BW0|A Chain A, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
pdb|1BW0|B Chain B, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
Length = 416
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 85/170 (50%), Gaps = 16/170 (9%)
Query: 19 QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFA 78
+VL +G + + + + D G+ LVP P +P ++ + G+ + +CR +++
Sbjct: 106 NVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCK-AYGIGMHFYNCRPENDWE 164
Query: 79 FSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEI 138
+ + R + K + +++ NP+NP G+ R+ + +++ A E + + SDEI
Sbjct: 165 ADLDEI------RRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEI 218
Query: 139 YGGSIFG----NEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTG 184
Y G +F N F S+A+ E RV I+ G + +L +PG+R G
Sbjct: 219 YAGMVFKGKDPNATFTSVADF----ETTVPRV-ILGGTAXNLVVPGWRLG 263
>pdb|3T32|A Chain A, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
pdb|3T32|B Chain B, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
Length = 383
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 15/180 (8%)
Query: 20 IVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAF 79
IV +AG PA+ ++LV P YP F + + + D +A
Sbjct: 85 IVFSAGIVPALSTSIQAFTKENESVLVQPPIYPPFFEXVTTNNRQLCVSPLQKQNDTYAI 144
Query: 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIY 139
L++ F Q GVK+ L+C+P NP+G + +E L +L + N+ V++DEI+
Sbjct: 145 DFEHLEKQFQQ----GVKLX--LLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIH 198
Query: 140 GGSIFGNEE---FVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAA 196
I+ + F S++E L A R S ++ G + +I NE + A
Sbjct: 199 SDIIYADHTHTPFASLSEELAA------RTITCXAPSXTFNIAGLQASIIIIPNEKLRQA 252
>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum
pdb|1J32|B Chain B, Aspartate Aminotransferase From Phormidium Lapideum
Length = 388
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 125/292 (42%), Gaps = 32/292 (10%)
Query: 15 FDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELI-PVHCRS 73
+ I++T G ++ L + + G+ +++P+P++ + ++ G +I P +
Sbjct: 88 YGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVET 147
Query: 74 TDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHV 133
F S + QA K + ++ P+NP G + + + + A E + V
Sbjct: 148 --QFKVSPEQIRQAITP------KTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWV 199
Query: 134 ISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESV 193
+SDEIY ++ + + +S I A +R + G +K ++ G+R G + V
Sbjct: 200 LSDEIYEKILYDDAQHLS---IGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVPLV 256
Query: 194 LAAAK----KLTRFCSISAPTQRLLISMLSDTK-FIQEYLETNKRRIKKLYDSFVAGLKQ 248
AA K + C+ + Q I+ +++ +QE L R + + D+ A
Sbjct: 257 KAATKIQGHSTSNVCTFA---QYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNA---M 310
Query: 249 LGIRCSESSAGLYCWADMSGLIPSYSEKGE--LELWDKLLNIAKINVTPGSA 298
G+ C + Y + PS ++ G L+ +LL+ ++ PG+A
Sbjct: 311 PGLECPKPDGAFY-------MFPSIAKTGRSSLDFCSELLDQHQVATVPGAA 355
>pdb|2ZC0|A Chain A, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|B Chain B, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|C Chain C, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|D Chain D, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
Length = 407
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 150/339 (44%), Gaps = 32/339 (9%)
Query: 1 MAGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRF 60
+A F+ + VS P IV+T G T A+++L L D G+ ++ +P Y + + F
Sbjct: 84 LAAFLKKYDHLEVS--PENIVITIGGTGALDLLGRVLIDPGDVVITENPSY--INTLLAF 139
Query: 61 R---TGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGIL-ICNPANPVGNIIPR 116
+E +PV DN + L++ + + +G KV+ I I NP+G +
Sbjct: 140 EQLGAKIEGVPV-----DNDGMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSM 194
Query: 117 ETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDL 176
E LL+ A + ++ +I D Y + + V + + ++ RV + LSK L
Sbjct: 195 ERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKAL-----DNEGRVIVAGTLSKVL 249
Query: 177 SLPGFRTGVIYSYNESV--LAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRR 234
GFR G I + E + + K+ FC+ A +Q + + L F + +LE
Sbjct: 250 GT-GFRIGWIIAEGEILKKVLMQKQPIDFCA-PAISQYIALEYLKRGYFEKYHLEGALLG 307
Query: 235 IKKLYDSFVAGLKQL--GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKIN 292
K+ D + L+ ++ AG++ +P ++ + ++L+ +
Sbjct: 308 YKEKRDIMLKALENHLPNAEFTKPIAGMFVMF----FLPEGADG--ISFANELMEREGVV 361
Query: 293 VTPGSACHCIEPG--WFRCCFTSLTHEDIPLVIERIQKV 329
V PG + E G R F+ + E+IP+ I+++ K+
Sbjct: 362 VVPGKPFYTDESGKNAIRLNFSRPSKEEIPIGIKKLAKL 400
>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase
pdb|3DYD|B Chain B, Human Tyrosine Aminotransferase
Length = 427
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 153/339 (45%), Gaps = 51/339 (15%)
Query: 15 FDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRST 74
+ ++LT+G + A+++ LA+ G +LVP P + + + + G+E+ +
Sbjct: 116 LEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLY-KTLAESMGIEVKLYNLLPE 174
Query: 75 DNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVI 134
++ + L+ ++ K +++ NP+NP G++ + L ++L A + + ++
Sbjct: 175 KSWEIDLKQLEYLIDE------KTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPIL 228
Query: 135 SDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIY--GLSKDLSLPGFRTGVIYSYN-- 190
+DEIYG +F + ++ +A + V I+ GL+K +PG+R G I ++
Sbjct: 229 ADEIYGDMVFSDCKYEPLATL-------STDVPILSCGGLAKRWLVPGWRLGWILIHDRR 281
Query: 191 --------ESVLAAAKKLTRFCSISAPTQRLLISMLSDT--KFIQEYLETNKRRIKKLYD 240
+ ++ ++++ C+I Q L S+L T +F L K Y
Sbjct: 282 DIFGNEIRDGLVKLSQRILGPCTI---VQGALKSILCRTPGEFYHNTLSFLKSNADLCYG 338
Query: 241 SFVAGLKQLGIRCSESSAGLYCWADMSGL-IPSYSE-KGELELWDKLLNIAKINVTPGSA 298
+ A G+R S +Y M G+ + + E + ++E ++L+ ++ P +
Sbjct: 339 ALAA---IPGLRPVRPSGAMYL---MVGIEMEHFPEFENDVEFTERLVAEQSVHCLPAT- 391
Query: 299 CHCIE-PGWFRCCFTSLTHEDIP--LVIERIQKVAETCK 334
C E P + R T +P +++E ++ E C+
Sbjct: 392 --CFEYPNFIRVVIT------VPEVMMLEACSRIQEFCE 422
>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|3E2Y|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
pdb|3E2Y|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
Length = 410
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 121/280 (43%), Gaps = 20/280 (7%)
Query: 16 DPSQIVLTA-GATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVEL-IPVHCRS 73
DP++ +L A GA ++ L D G+ +++ P+Y ++ +R V + IP+ +
Sbjct: 83 DPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKP 142
Query: 74 TDNFAFSITALDQAFNQAR---KRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKN 130
TD + T+ D F+ K K + I++ P NP+G + R+ L + D + +
Sbjct: 143 TDGMKW--TSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHD 200
Query: 131 IHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYN 190
ISDE+Y ++ V +A + E R I K S+ G++ G +S
Sbjct: 201 TLCISDEVYEWLVYTGHTHVKIATLPGMWE----RTITIGSAGKTFSVTGWKLG--WSIG 254
Query: 191 ESVLAAAKKLTR---FCSISAPTQRLLI-SMLSDTKFIQE---YLETNKRRIKKLYDSFV 243
+ L + + F + + P Q L + D K + + Y + + ++ D V
Sbjct: 255 PAHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMV 314
Query: 244 AGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWD 283
L +G++ G + AD+S L S+ E +D
Sbjct: 315 RLLNSVGLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYD 354
>pdb|3H14|A Chain A, Crystal Structure Of A Putative Aminotransferase From
Silicibacter Pomeroyi
Length = 391
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 120/288 (41%), Gaps = 31/288 (10%)
Query: 12 AVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHC 71
V DP ++V+T G++ + L D G+ + + +P YP + + +R + L+PV
Sbjct: 86 GVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILR---ALGLVPVDL 142
Query: 72 RSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNI 131
+ D A G+ + G+ + +PANP G + L++ A+ +
Sbjct: 143 PTAPENRLQPVPADFA-------GLDLAGLXVASPANPTGTXLDHAAXGALIEAAQAQGA 195
Query: 132 HVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNE 191
ISDEIY G + A+ + A E+ D ++I SK S G+R G +
Sbjct: 196 SFISDEIYHGIEY-------EAKAVTALEL-TDECYVINSFSKYFSXTGWRVGWXVVPED 247
Query: 192 SVLAAAKKLTRFCSISAP--TQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL 249
V +++ + I AP +Q ++ L +Q L+ K K + L +
Sbjct: 248 QVR-VVERIAQNXFICAPHASQVAALAALDCDAELQANLDVYKANRKLXLER----LPKA 302
Query: 250 GI-RCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPG 296
G R + Y +AD+S L ++L A + VTPG
Sbjct: 303 GFTRIAPPDGAFYVYADVSDLT-----DDSRAFAAEILEKAGVAVTPG 345
>pdb|1FG3|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase Complexed With L-Histidinol
pdb|1FG7|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase With Pyridoxal-5'-Phosphate
Length = 356
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 103/247 (41%), Gaps = 35/247 (14%)
Query: 10 GQAVSFDPSQIVLTAGATPAVEILCFCLADHG-NALLVPSPYYPGFDRDIRFRTGVELIP 68
Q P Q++++ GA +E+L + G +A+L P Y + E I
Sbjct: 68 AQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGXYS------VSAETIG 121
Query: 69 VHCRST---DNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDF 125
V CR+ DN+ + + + GVKV + +C+P NP G +I + LL+
Sbjct: 122 VECRTVPTLDNWQLDLQGISDKLD-----GVKV--VYVCSPNNPTGQLINPQDFRTLLEL 174
Query: 126 AREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGV 185
R K I V++DE Y EF A L + + I+ LSK +L G R G
Sbjct: 175 TRGKAI-VVADEAYI-------EFCPQAS-LAGWLAEYPHLAILRTLSKAFALAGLRCGF 225
Query: 186 IYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLY---DSF 242
+ NE V+ K+ +S P + LS + + R+ ++ +
Sbjct: 226 TLA-NEEVINLLXKVIAPYPLSTPVADIAAQALSPQGIV-----AXRERVAQIIAEREYL 279
Query: 243 VAGLKQL 249
+A LK++
Sbjct: 280 IAALKEI 286
>pdb|4DGT|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DGT|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DQ6|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
pdb|4DQ6|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
Length = 391
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 79/169 (46%), Gaps = 13/169 (7%)
Query: 20 IVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELI--PVHCRSTDNF 77
++ + G PA+ +L L + +++ P Y F+ ++ ELI P+ N+
Sbjct: 93 LIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSVVK-NNNRELIISPLQKLENGNY 151
Query: 78 AFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDE 137
++ V+ ++CNP NPVG + ++ L +L D + N+ +ISDE
Sbjct: 152 IMDYEDIENKIKD-------VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDE 204
Query: 138 IYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVI 186
I+ I + + MA I ++E +K+ + + +K ++ G ++ +
Sbjct: 205 IHSDIILKKHKHIPMASI--SKEFEKNTITCM-APTKTFNIAGLQSSYV 250
>pdb|1GEW|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Pyridoxal 5'-Phosphate
pdb|1GEX|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Histidinol-Phosphate
pdb|1GEY|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With N-(5'-Phosphopyridoxyl)-L-Glutamate
pdb|1IJI|A Chain A, Crystal Structure Of L-histidinol Phosphate
Aminotransferase With Plp
Length = 356
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 91/214 (42%), Gaps = 27/214 (12%)
Query: 10 GQAVSFDPSQIVLTAGATPAVEILCFCLADHG-NALLVPSPYYPGFDRDIRFRTGVELIP 68
Q P Q++++ GA +E+L + G +A+L P Y G + E I
Sbjct: 68 AQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTY-GM-----YSVSAETIG 121
Query: 69 VHCRST---DNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDF 125
V CR+ DN+ + + + GVKV + +C+P NP G +I + LL+
Sbjct: 122 VECRTVPTLDNWQLDLQGISDKLD-----GVKV--VYVCSPNNPTGQLINPQDFRTLLEL 174
Query: 126 AREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGV 185
R K I V++DE Y EF A L + + I+ LSK +L G R G
Sbjct: 175 TRGKAI-VVADEAYI-------EFCPQAS-LAGWLAEYPHLAILRTLSKAFALAGLRCGF 225
Query: 186 IYSYNESVLAAAKKLTRFCSISAPTQRLLISMLS 219
+ NE V+ K+ +S P + LS
Sbjct: 226 TLA-NEEVINLLMKVIAPYPLSTPVADIAAQALS 258
>pdb|3B46|A Chain A, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
pdb|3B46|B Chain B, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
Length = 447
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 114/259 (44%), Gaps = 20/259 (7%)
Query: 19 QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTG-VELIPVHC------ 71
+ +T GA + L + G+ ++V P++ + +I G V +P++
Sbjct: 120 NVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQ 179
Query: 72 RSTDNFAFSITALDQAFNQARKR-GVKVRGILICNPANPVGNIIPRETLYELLDFAREKN 130
R+T ++I F Q K K + ++I P NP+G + RE L L + + N
Sbjct: 180 RNTRGEEWTID-----FEQFEKAITSKTKAVIINTPHNPIGKVFTREELTTLGNICVKHN 234
Query: 131 IHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYN 190
+ +ISDE+Y ++ + F +A + + E+ + + + + G+R G + S N
Sbjct: 235 VVIISDEVY-EHLYFTDSFTRIATL--SPEIGQLTL-TVGSAGXSFAATGWRIGWVLSLN 290
Query: 191 ESVLA-AAKKLTRFCSIS-APTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQ 248
+L+ AAK TR C S +P Q + ++D I Y E ++ + F + +
Sbjct: 291 AELLSYAAKAHTRICFASPSPLQEACANSINDALKIG-YFEKMRQEYINKFKIFTSIFDE 349
Query: 249 LGIRCSESSAGLYCWADMS 267
LG+ + + D S
Sbjct: 350 LGLPYTAPEGTYFVLVDFS 368
>pdb|3OP7|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 1.70
A Resolution
pdb|3P6K|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
pdb|3P6K|B Chain B, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
Length = 375
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 18/221 (8%)
Query: 17 PSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDN 76
P QI+ T GAT A ++ + L + G+ ++ P Y DI G E+ +
Sbjct: 81 PEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQL-YDIPKSLGAEVDLWQIEEENG 139
Query: 77 FAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISD 136
+ + L Q K I I N NP G + R L EL++ A E +++SD
Sbjct: 140 WLPDLEKLRQLIRPTTKX------ICINNANNPTGAVXDRTYLEELVEIASEVGAYILSD 193
Query: 137 EIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAA 196
E+Y F + S+ E+ D+ + LS SLPG R G + + N V
Sbjct: 194 EVYRS--FSELDVPSIIEVY-------DKGIAVNSLSXTYSLPGIRIGWV-AANHQVTDI 243
Query: 197 AKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237
+ + I A L++ L+ + QE LE N+ +++
Sbjct: 244 LRDYRDYTXICAGVFDDLVAQLALAHY-QEILERNRHILEE 283
>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2F|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2Z|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|2ZJG|A Chain A, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
pdb|2ZJG|B Chain B, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
Length = 410
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 120/280 (42%), Gaps = 20/280 (7%)
Query: 16 DPSQIVLTA-GATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVEL-IPVHCRS 73
DP++ +L A GA ++ L D G+ +++ P+Y ++ +R V + IP+ +
Sbjct: 83 DPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKP 142
Query: 74 TDNFAFSITALDQAFNQAR---KRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKN 130
TD + T+ D F+ K K + I++ P NP+G + R+ L + D + +
Sbjct: 143 TDGMKW--TSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHD 200
Query: 131 IHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYN 190
ISDE+Y ++ V +A + E R I S+ G++ G +S
Sbjct: 201 TLCISDEVYEWLVYTGHTHVKIATLPGMWE----RTITIGSAGXTFSVTGWKLG--WSIG 254
Query: 191 ESVLAAAKKLTR---FCSISAPTQRLLI-SMLSDTKFIQE---YLETNKRRIKKLYDSFV 243
+ L + + F + + P Q L + D K + + Y + + ++ D V
Sbjct: 255 PAHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMV 314
Query: 244 AGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWD 283
L +G++ G + AD+S L S+ E +D
Sbjct: 315 RLLNSVGLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYD 354
>pdb|2EGY|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|C Chain C, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|D Chain D, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2ZP7|C Chain C, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|D Chain D, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|F Chain F, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|3CBF|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase, From Thermus Thermophilus Hb27
pdb|3CBF|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase, From Thermus Thermophilus Hb27
pdb|2Z1Y|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Leucine), From Thermus
Thermophilus Hb27
pdb|2Z1Y|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Leucine), From Thermus
Thermophilus Hb27
pdb|2ZP7|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|E Chain E, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZYJ|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Glutamate), From Thermus
Thermophilus Hb27
pdb|2ZYJ|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Glutamate), From Thermus
Thermophilus Hb27
Length = 397
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 112/261 (42%), Gaps = 23/261 (8%)
Query: 13 VSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVEL-IPVHC 71
+ P ++++T G+ A++++ D G+ +L+ +P Y G + R + L +P
Sbjct: 87 IGVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGE 146
Query: 72 RSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNI 131
D + AL++ + R R + LI + NP G + P LL E+ +
Sbjct: 147 EGPD-----LDALEEVLKRERPRFL----YLIPSFQNPTGGLTPLPARKRLLQMVMERGL 197
Query: 132 HVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNE 191
V+ D+ Y FG S+ E+ A E V + SK LS PG R ++ E
Sbjct: 198 VVVEDDAYRELYFGEARLPSLFEL--AREAGYPGVIYLGSFSKVLS-PGLRVAFAVAHPE 254
Query: 192 SV--LAAAKKLTRFCSISAPT-QRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQ 248
++ L AK+ + P ++L+ L F E LE +R ++ + + L +
Sbjct: 255 ALQKLVQAKQ---GADLHTPMLNQMLVHELLKEGF-SERLERVRRVYREKAQAMLHALDR 310
Query: 249 ---LGIRCSESSAGLYCWADM 266
+R + G++ W ++
Sbjct: 311 EVPKEVRYTRPKGGMFVWMEL 331
>pdb|3NRA|A Chain A, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
pdb|3NRA|B Chain B, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
Length = 407
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 132/324 (40%), Gaps = 31/324 (9%)
Query: 20 IVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCR--STDNF 77
+++T G A+ + G+ + + P Y + + F G E +PV S D
Sbjct: 105 LIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFFEG-EXVPVQLDYVSADET 163
Query: 78 --AFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVIS 135
+T L++AF K G +V L NP NP G + E + ++ A VI+
Sbjct: 164 RAGLDLTGLEEAF----KAGARV--FLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIA 217
Query: 136 DEIYGGSIFGNEEFVSMAEILEAE-EVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVL 194
D++Y + + L AE VD + V I G S SL G+R GV + + +++
Sbjct: 218 DQLYSRLRYAGASYTH----LRAEAAVDAENVVTIXGPSXTESLSGYRLGVAFG-SRAII 272
Query: 195 AAAKKLTRFCSISAP--TQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GI 251
A +KL S+ A +Q +L + + E R + + D + L+ G+
Sbjct: 273 ARXEKLQAIVSLRAAGYSQAVLRGWFDEAP---GWXEDRIARHQAIRDELLHVLRGXEGV 329
Query: 252 RCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNI-AKINVTPGSACHCIEPGWFRCC 310
AG Y + + L + +E + K+L + A + VTPG+ R
Sbjct: 330 FARTPQAGSYLFPRLPKLAVAPAE------FVKILRLQAGVVVTPGTEFSPHTADSVRLN 383
Query: 311 FTSLTHEDIPLVIERIQKVAETCK 334
F S HE RI + E +
Sbjct: 384 F-SQDHEAAVAAARRIVTLVERYR 406
>pdb|1YIY|A Chain A, Aedes Aegypti Kynurenine Aminotransferase
pdb|1YIY|B Chain B, Aedes Aegypti Kynurenine Aminotransferase
pdb|2R5C|B Chain B, Aedes Kynurenine Aminotransferase In Complex With Cysteine
pdb|2R5E|A Chain A, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
pdb|2R5E|B Chain B, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
Length = 429
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 122/281 (43%), Gaps = 27/281 (9%)
Query: 5 MSQVLGQAV--SFDP-SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFR 61
+S++ Q V + +P +++++T GA A+ D G+ +++ P++ ++ ++
Sbjct: 86 LSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAA 145
Query: 62 TGV-ELIPVHCRSTD------NFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNII 114
G+ IP+ T ++ L+ FN+ K + I+I P NP+G ++
Sbjct: 146 GGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNE------KTKMIIINTPHNPLGKVM 199
Query: 115 PRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSK 174
R L + + ++ N+ +SDE+Y +F E + + + E R I K
Sbjct: 200 DRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWE----RTITIGSAGK 255
Query: 175 DLSLPGFRTGVIYSYNESVLAAAKKLTRFC--SISAPTQRLLI----SMLSDTKFIQEYL 228
SL G++ G Y E++L + + + C + + P Q + + L K + Y
Sbjct: 256 TFSLTGWKIGWAYG-PEALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYF 314
Query: 229 ETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGL 269
+ + D + L ++G+ + G + AD S L
Sbjct: 315 NSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVADWSSL 355
>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
pdb|2O0R|B Chain B, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
Length = 411
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 112/260 (43%), Gaps = 25/260 (9%)
Query: 13 VSFDP-SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRF----RTGVELI 67
V +DP +++++T GAT A+ L + G+ +L+ P+Y + + R V L+
Sbjct: 81 VDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLV 140
Query: 68 PVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAR 127
P FA AL +A + R ++I +P NP G ++ L + + A
Sbjct: 141 P----DGRGFALDADALRRAVTP------RTRALIINSPHNPTGAVLSATELAAIAEIAV 190
Query: 128 EKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIY 187
N+ VI+DE+Y +F + + +A E R I + + G++ G
Sbjct: 191 AANLVVITDEVYEHLVFDHARHLPLAGFDGMAE----RTITISSAAXMFNCTGWKIGWAC 246
Query: 188 SYNESV--LAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAG 245
E + + AAK+ + AP Q +++ DT+ ++ + ++ D AG
Sbjct: 247 GPAELIAGVRAAKQYLSYVG-GAPFQP-AVALALDTE--DAWVAALRNSLRARRDRLAAG 302
Query: 246 LKQLGIRCSESSAGLYCWAD 265
L ++G +S + AD
Sbjct: 303 LTEIGFAVHDSYGTYFLCAD 322
>pdb|3IHJ|A Chain A, Human Alanine Aminotransferase 2 In Complex With Plp
Length = 498
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 73/150 (48%), Gaps = 7/150 (4%)
Query: 12 AVSFDPSQIVLTAGATPAVEILCFCLADHG----NALLVPSPYYPGFDRDIRFRTGVELI 67
V DP I LT GA+ + + L G +++P P YP + I ++ +
Sbjct: 148 GVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISELDAIQ-V 206
Query: 68 PVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAR 127
+ + +A ++ L +A +A+ + + I NP NP G + R+ + +++ FA
Sbjct: 207 NYYLDEENCWALNVNELRRAVQEAKDH-CDPKVLCIINPGNPTGQVQSRKCIEDVIHFAW 265
Query: 128 EKNIHVISDEIYGGSIFGNE-EFVSMAEIL 156
E+ + +++DE+Y +++ + F S ++L
Sbjct: 266 EEKLFLLADEVYQDNVYSPDCRFHSFKKVL 295
>pdb|1YIZ|A Chain A, Aedes Aegypti Kynurenine Aminotrasferase
pdb|1YIZ|B Chain B, Aedes Aegypti Kynurenine Aminotrasferase
pdb|2R5C|A Chain A, Aedes Kynurenine Aminotransferase In Complex With Cysteine
Length = 429
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 121/281 (43%), Gaps = 27/281 (9%)
Query: 5 MSQVLGQAV--SFDP-SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFR 61
+S++ Q V + +P +++++T GA A+ D G+ +++ P++ ++ ++
Sbjct: 86 LSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAA 145
Query: 62 TGV-ELIPVHCRSTD------NFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNII 114
G+ IP+ T ++ L+ FN+ K + I+I P NP+G ++
Sbjct: 146 GGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNE------KTKMIIINTPHNPLGKVM 199
Query: 115 PRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSK 174
R L + + ++ N+ +SDE+Y +F E + + + E R I
Sbjct: 200 DRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWE----RTITIGSAGX 255
Query: 175 DLSLPGFRTGVIYSYNESVLAAAKKLTRFC--SISAPTQRLLI----SMLSDTKFIQEYL 228
SL G++ G Y E++L + + + C + + P Q + + L K + Y
Sbjct: 256 TFSLTGWKIGWAYG-PEALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYF 314
Query: 229 ETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGL 269
+ + D + L ++G+ + G + AD S L
Sbjct: 315 NSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVADWSSL 355
>pdb|1X0M|A Chain A, A Human Kynurenine Aminotransferase Ii Homologue From
Pyrococcus Horikoshii Ot3
Length = 403
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 141/335 (42%), Gaps = 50/335 (14%)
Query: 18 SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCR-STDN 76
+ I++T+G+ A++++ + G+ ++V +P Y + F P + + D+
Sbjct: 96 NDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYE-----PQYIQIPLDD 150
Query: 77 FAFSITALDQAFNQARKRGVKVRGIL-ICNPANPVGNIIPRETLYELLDFAREKNIHVIS 135
+ L++ + + +G KV+ + + NP G + + LL+ A E + V+
Sbjct: 151 EGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVE 210
Query: 136 DEIYGGSIF-GNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESV- 193
D+ YG + GN E + + +D + I G + PGFR G + +
Sbjct: 211 DDPYGELRYSGNPE-------KKIKALDNEGRVIYLGTFSKILAPGFRIGWMVGDPGIIR 263
Query: 194 -LAAAKKLTRFCSISAPTQRLLISMLSDTKFIQ-EYLETNKRRIKKLY----DSFVAGLK 247
+ AK+ T C+ + + +++ YLE + I+K Y D+ + L+
Sbjct: 264 KMEIAKQSTDLCTN-------VFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALE 316
Query: 248 QL---GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIA---KINVTPGSA--C 299
+ G++ ++ G++ W + I S K+L A + PG A
Sbjct: 317 EFMPEGVKWTKPEGGMFIWVTLPDGIDS----------KKMLERAIKKGVAYVPGEAFYA 366
Query: 300 HCIEPGWFRCCFTSLTHEDIPLVIERIQKVAETCK 334
H R FT + + I +E I+++AET K
Sbjct: 367 HRDVKNTMRLNFTYVDEDKI---MEGIKRLAETIK 398
>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Pmp Form
Length = 422
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 95/216 (43%), Gaps = 13/216 (6%)
Query: 1 MAGFMSQVLGQAVSFDP-SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIR 59
+A F ++LGQ + DP +++T G A+ L D G+ +++ P++ ++
Sbjct: 76 LASFFGELLGQEI--DPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTM 133
Query: 60 FRTG----VELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIP 115
G V L P ++ + + S LD A K + + +++ P NP+G +
Sbjct: 134 MAGGRPVFVSLKPGPIQNGELGSSSNWQLD-PMELAGKFTSRTKALVLNTPNNPLGKVFS 192
Query: 116 RETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKD 175
RE L + ++ ++ I+DE+Y ++ + +S+A + E R I K
Sbjct: 193 REELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWE----RTLTIGSAGKT 248
Query: 176 LSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQ 211
S G++ G + + ++ + + + PTQ
Sbjct: 249 FSATGWKVGWVLG-PDHIMKHLRTVHQNSVFHCPTQ 283
>pdb|3L8A|A Chain A, Crystal Structure Of Metc From Streptococcus Mutans
pdb|3L8A|B Chain B, Crystal Structure Of Metc From Streptococcus Mutans
Length = 421
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 122/286 (42%), Gaps = 28/286 (9%)
Query: 20 IVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAF 79
I+ G PA+ I ++ G+A+L+ SP Y F R IR H ++
Sbjct: 122 ILFIDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTIRLND-------HRLVENSLQI 174
Query: 80 SITALDQAFNQARKRGV--KVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDE 137
+ F Q K + V+ L+C+P NP G + + L ++ + ++ + ++SDE
Sbjct: 175 INGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDE 234
Query: 138 IYGG-SIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAA 196
I+ ++FGN L+A KD I+ +K ++ G + NES+
Sbjct: 235 IHQDLALFGNTH--HSLNTLDASY--KDFTIILSSATKTFNIAGTKNSFAIIQNESL--- 287
Query: 197 AKKLTRFCSISAPTQRL----LISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLK-QLGI 251
++ ++ ++ + +I+ + ++ + +LE K I+ + L+ + I
Sbjct: 288 -RRKFQYRQLANNQHEVPTVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELEAKTKI 346
Query: 252 RCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGS 297
+ E W D S + + +L +KL N AK+ + G+
Sbjct: 347 KVMEPEGTYLVWLDFSAYAIA-----QPQLSEKLQNEAKVVLNDGA 387
>pdb|3AOV|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOV|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOW|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3AOW|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3ATH|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3ATH|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3AV7|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
pdb|3AV7|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
Length = 448
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 141/335 (42%), Gaps = 50/335 (14%)
Query: 18 SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCR-STDN 76
+ I++T+G+ A++++ + G+ ++V +P Y + F P + + D+
Sbjct: 141 NDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYE-----PQYIQIPLDD 195
Query: 77 FAFSITALDQAFNQARKRGVKVRGIL-ICNPANPVGNIIPRETLYELLDFAREKNIHVIS 135
+ L++ + + +G KV+ + + NP G + + LL+ A E + V+
Sbjct: 196 EGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVE 255
Query: 136 DEIYGGSIF-GNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESV- 193
D+ YG + GN E + + +D + I G + PGFR G + +
Sbjct: 256 DDPYGELRYSGNPE-------KKIKALDNEGRVIYLGTFSKILAPGFRIGWMVGDPGIIR 308
Query: 194 -LAAAKKLTRFCSISAPTQRLLISMLSDTKFIQ-EYLETNKRRIKKLY----DSFVAGLK 247
+ AK+ T C+ + + +++ YLE + I+K Y D+ + L+
Sbjct: 309 KMEIAKQSTDLCTN-------VFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALE 361
Query: 248 QL---GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIA---KINVTPGSA--C 299
+ G++ ++ G++ W + I S K+L A + PG A
Sbjct: 362 EFMPEGVKWTKPEGGMFIWVTLPDGIDS----------KKMLERAIKKGVAYVPGEAFYA 411
Query: 300 HCIEPGWFRCCFTSLTHEDIPLVIERIQKVAETCK 334
H R FT + + I +E I+++AET K
Sbjct: 412 HRDVKNTMRLNFTYVDEDKI---MEGIKRLAETIK 443
>pdb|1W7L|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
pdb|1W7M|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With L-Phe
Length = 422
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 94/216 (43%), Gaps = 13/216 (6%)
Query: 1 MAGFMSQVLGQAVSFDP-SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIR 59
+A F ++LGQ + DP +++T G A+ L D G+ +++ P++ ++
Sbjct: 76 LASFFGELLGQEI--DPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTM 133
Query: 60 FRTG----VELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIP 115
G V L P ++ + + S LD A K + + +++ P NP+G +
Sbjct: 134 MAGGRPVFVSLKPGPIQNGELGSSSNWQLD-PMELAGKFTSRTKALVLNTPNNPLGKVFS 192
Query: 116 RETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKD 175
RE L + ++ ++ I+DE+Y ++ + +S+A + E R I
Sbjct: 193 REELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWE----RTLTIGSAGXT 248
Query: 176 LSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQ 211
S G++ G + + ++ + + + PTQ
Sbjct: 249 FSATGWKVGWVLG-PDHIMKHLRTVHQNSVFHCPTQ 283
>pdb|3FVS|A Chain A, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVS|B Chain B, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVU|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVU|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVX|A Chain A, Human Kynurenine Aminotransferase I In Complex With Tris
pdb|3FVX|B Chain B, Human Kynurenine Aminotransferase I In Complex With Tris
Length = 422
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 94/216 (43%), Gaps = 13/216 (6%)
Query: 1 MAGFMSQVLGQAVSFDP-SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIR 59
+A F ++LGQ + DP +++T G A+ L D G+ +++ P++ ++
Sbjct: 76 LASFFGELLGQEI--DPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTM 133
Query: 60 FRTG----VELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIP 115
G V L P ++ + + S LD A K + + +++ P NP+G +
Sbjct: 134 MAGGRPVFVSLKPGPIQNGELGSSSNWQLD-PMELAGKFTSRTKALVLNTPNNPLGKVFS 192
Query: 116 RETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKD 175
RE L + ++ ++ I+DE+Y ++ + +S+A + E R I
Sbjct: 193 REELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWE----RTLTIGSAGXT 248
Query: 176 LSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQ 211
S G++ G + + ++ + + + PTQ
Sbjct: 249 FSATGWKVGWVLG-PDHIMKHLRTVHQNSVFHCPTQ 283
>pdb|3FTB|A Chain A, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|B Chain B, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|D Chain D, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|E Chain E, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
Length = 361
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 10/153 (6%)
Query: 98 VRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILE 157
V ++I NP NP G +I +E +L A EK +I DE + G+ + EI
Sbjct: 145 VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFI-EFTGDPSSSFVGEI-- 201
Query: 158 AEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISM 217
+ + II ++K ++PG R G + N+ + A K +I+ + I+
Sbjct: 202 ---KNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNPWNINCFAEMAAINC 258
Query: 218 LSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLG 250
L DT +I+E L IKK F+ L ++G
Sbjct: 259 LKDTNYIEESL----LWIKKERKRFIEELNKIG 287
>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
pdb|3ASB|A Chain A, Crystal Structure Of Plp-Bound Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
Length = 400
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 121/325 (37%), Gaps = 44/325 (13%)
Query: 16 DPSQIVLTAGA-TPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRST 74
D +I ++ GA +L F + A+ PS YP + R E+I + C
Sbjct: 94 DAKEIFISDGAKVDLFRLLSFFGPNQTVAIQDPS--YPAYLDIARLTGAKEIIALPCLQ- 150
Query: 75 DNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVI 134
+ AF + + +C+P NP G ++ ++ L ++ +A E I ++
Sbjct: 151 ----------ENAFFPEFPEDTHIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILIL 200
Query: 135 SDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTG-------VIY 187
D Y I S+ EI +A + I SK L G R G + Y
Sbjct: 201 FDAAYSTFISDPSLPKSIFEIPDARFCAIE----INSFSKPLGFAGIRLGWTVIPQELTY 256
Query: 188 SYNESVLAAAKKL--TRFCSISAPTQRLLISMLSDTKFIQ--EYLETNKRRIKKLYDSFV 243
+ V+ ++ T F S P Q ++ LS ++ Y N ++K
Sbjct: 257 ADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSILPQLEAIHYYRENSDLLRK------ 310
Query: 244 AGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIE 303
L G Y W P+ + + +L+D L I +TPG
Sbjct: 311 -ALLATGFEVFGGEHAPYLWVK-----PTQANISDRDLFDFFLREYHIAITPGIGFGRSG 364
Query: 304 PGWFRCCFTSL-THEDIPLVIERIQ 327
G+ R F+SL EDI ER+Q
Sbjct: 365 SGFVR--FSSLGKREDILAACERLQ 387
>pdb|3DZZ|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
pdb|3DZZ|B Chain B, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
Length = 391
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 104/262 (39%), Gaps = 32/262 (12%)
Query: 21 VLTAGATPAVEILCFCLADHGNALLVPSPYYPGF----DRDIRFRTGVELIPVHCRSTDN 76
V +G PA+ G+ +LV P Y F + + R +LI +N
Sbjct: 89 VFASGVVPAISAXVRQFTSPGDQILVQEPVYNXFYSVIEGNGRRVISSDLI------YEN 142
Query: 77 FAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISD 136
+S+ D + + VR + CNP NP+G E + + + + + +ISD
Sbjct: 143 SKYSVNWADL---EEKLATPSVRXXVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISD 199
Query: 137 EIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGL---SKDLSLPGFRTGVIYSYNESV 193
EI+G + +E +I A VD D + + L S +L N +
Sbjct: 200 EIHGDLVLTDE------DITPAFTVDWDAKNWVVSLISPSXTFNLAALHAACAIIPNPDL 253
Query: 194 LAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKK-LYDSFVAGLKQLG-- 250
A A++ I P + + ++ + ++L R +K+ L D+F + L
Sbjct: 254 RARAEESFFLAGIGEPNLLAIPAAIAAYEEGHDWL----RELKQVLRDNFAYAREFLAKE 309
Query: 251 ---IRCSESSAGLYCWADMSGL 269
++ +S+A W D+S L
Sbjct: 310 VPEVKVLDSNASYLAWVDISAL 331
>pdb|2O1B|A Chain A, Structure Of Aminotransferase From Staphylococcus Aureus
Length = 404
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 66/167 (39%), Gaps = 7/167 (4%)
Query: 97 KVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEIL 156
K + I + P NP G+ +E E + + + ++ D YG FG F + +
Sbjct: 181 KTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGA--FG---FDAKNPSI 235
Query: 157 EAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLIS 216
A E KD IY LSK + GFR G N+ + A KK + + L +
Sbjct: 236 LASENGKDVAIEIYSLSKGYNXSGFRVGFAVG-NKDXIQALKKYQTHTN-AGXFGALQDA 293
Query: 217 MLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCW 263
+ ++LE K D F A L + + + G+Y W
Sbjct: 294 AIYALNHYDDFLEEQSNVFKTRRDRFEAXLAKADLPFVHAKGGIYVW 340
>pdb|3FDB|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Beta-Cystathionase (Aecd, Dip1736) From Corynebacterium
Diphtheriae At 1.99 A Resolution
Length = 377
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 44 LLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILI 103
++VP+P YP F + + + +T ++ +++ F R IL+
Sbjct: 108 VIVPTPAYPPF---FHLLSATQREGIFIDATG--GINLHDVEKGFQAG------ARSILL 156
Query: 104 CNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVS 151
CNP NP+G + E L EL D A + V+ DEI+ +F + V+
Sbjct: 157 CNPYNPLGXVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVA 204
>pdb|1VP4|A Chain A, Crystal Structure Of A Putative Aminotransferase (Tm1131)
From Thermotoga Maritima Msb8 At 1.82 A Resolution
pdb|1VP4|B Chain B, Crystal Structure Of A Putative Aminotransferase (Tm1131)
From Thermotoga Maritima Msb8 At 1.82 A Resolution
Length = 425
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 109/260 (41%), Gaps = 24/260 (9%)
Query: 15 FDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIR-FRTGVELIPVHCRS 73
D ++ T G+ A++++ D + ++ P Y G R + ++P+
Sbjct: 107 LDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDDG 166
Query: 74 TDNFAFSITALDQAFNQARKRGVKVRGI----LICNPANPVGNIIPRETLYELLDFAREK 129
D + L++ ++ K G K++ + ++ N NP G E L++ A +
Sbjct: 167 XD-----LNVLERKLSEFDKNG-KIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKY 220
Query: 130 NIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSY 189
++ ++ D+ YG + E + +I E RV ++ SK L+ PG R G +
Sbjct: 221 DLFIVEDDPYGALRYEGETVDPIFKIGGPE-----RVVLLNTFSKVLA-PGLRIGXVAGS 274
Query: 190 NESV--LAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEY---LETNKRRIKKLYDSFVA 244
E + + AK+ CS A T RL L +++ +E +R+ ++
Sbjct: 275 KEFIRKIVQAKQSADLCS-PAITHRLAARYLERYDLLEQLKPTIELYRRKRTVXLNALEE 333
Query: 245 GLKQL-GIRCSESSAGLYCW 263
+ G++ +S GL+ W
Sbjct: 334 YFSDIPGVKWVKSEGGLFIW 353
>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
pdb|2DOU|B Chain B, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
Length = 376
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 101/261 (38%), Gaps = 28/261 (10%)
Query: 12 AVSFDPSQIVLTA-GATPAVEILCFCLADHGNALLVPSPYYP---GFDRDIRFRTGVELI 67
V DP + L G+ + L L + + LL+P YP G R RT LI
Sbjct: 81 GVGLDPRREALALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTF--LI 138
Query: 68 PVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAR 127
P+ + +A + R KV +L+ P NP G + E L AR
Sbjct: 139 PLREDGLADL--------KAVPEGVWREAKV--LLLNYPNNPTGAVADWGYFEEALGLAR 188
Query: 128 EKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIY 187
+ + +I D Y ++ E +A K+RV ++ LSK +L GFR G
Sbjct: 189 KHGLWLIHDNPYVDQVYEGEAPSPLAL-----PGAKERVVELFSLSKSYNLAGFRLGFAL 243
Query: 188 SYNESV--LAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAG 245
E++ L K + F + + + ++ + + ++ Y + R + ++
Sbjct: 244 GSEEALARLERVKGVIDFNQYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKGV 303
Query: 246 LKQLGIRCSESSAGLYCWADM 266
L L R + +Y W +
Sbjct: 304 LSLLPPRAT-----MYLWGRL 319
>pdb|3G7Q|A Chain A, Crystal Structure Of Valine-Pyruvate Aminotransferase Avta
(Np_462565.1) From Salmonella Typhimurium Lt2 At 1.80 A
Resolution
Length = 417
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 16/108 (14%)
Query: 95 GVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYG----GSIFGNEEFV 150
G + I + P NP GN+I E L +L A + NI ++ D YG G IF
Sbjct: 178 GEETGXICVSRPTNPTGNVITDEELXKLDRLANQHNIPLVIDNAYGVPFPGIIFS----- 232
Query: 151 SMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAK 198
EA + + + LSK L LPG R G+I + ++++ A A
Sbjct: 233 ------EARPLWNPNIILCXSLSK-LGLPGSRCGIIIANDKTITAIAN 273
>pdb|3EZS|A Chain A, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
pdb|3EZS|B Chain B, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
Length = 376
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 15/156 (9%)
Query: 34 CFCLADHGNALLV-PSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQAR 92
F L D+ N + P+P+Y ++ +F L+ + D + N+
Sbjct: 100 SFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLXPLTKEND--------FTPSLNEKE 151
Query: 93 KRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSM 152
+ V + +++ +P NP G + E L + A + + +I+DE Y I+ N S+
Sbjct: 152 LQEVDL--VILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECY-SEIYENTPPPSL 208
Query: 153 AE--ILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVI 186
E L E K+ V +I+ LSK S PG R+G I
Sbjct: 209 LEACXLAGNEAFKN-VLVIHSLSKRSSAPGLRSGFI 243
>pdb|3FFH|A Chain A, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262.
pdb|3FFH|B Chain B, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262
Length = 363
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 111/286 (38%), Gaps = 39/286 (13%)
Query: 3 GFMSQVLGQAVSF---DPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIR 59
G+ S + + F + +++ TAG +E+L L D + +P + + ++
Sbjct: 67 GWASSLRKEVADFYQLEEEELIFTAGVDELIELLTRVLLDTTTNTVXATPTFVQYRQNAL 126
Query: 60 FRTG-VELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRET 118
V IP+ + + A+D+ K + ICNP NP GN I
Sbjct: 127 IEGAEVREIPLLQDGEHDLEGXLNAIDE----------KTTIVWICNPNNPTGNYIELAD 176
Query: 119 LYELLDFAREKNIHVISDEIYGGSIFGNEEFVS-MAEILEAEEVDKDRVHIIYGLSKDLS 177
+ LD ++ V+ DE Y E+V+ E E + I SK
Sbjct: 177 IQAFLDRV-PSDVLVVLDEAYI-------EYVTPQPEKHEKLVRTYKNLIITRTFSKIYG 228
Query: 178 LPGFRTGVIYSYNESVLAAAKKLTRFCSISAPT-------QRLLISMLSDTKFIQEYLET 230
L R G Y A K++ R +I P Q+L I + D FI E +
Sbjct: 229 LASARVG--YGI------ADKEIIRQLNIVRPPFNTTSIGQKLAIEAIKDQAFIGECRTS 280
Query: 231 NKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEK 276
N IK+ Y++F +++ + + + L +G I SY EK
Sbjct: 281 NANGIKQ-YEAFAKRFEKVKLYPANGNFVLIDLGIEAGTIFSYLEK 325
>pdb|3JTX|A Chain A, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
pdb|3JTX|B Chain B, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
Length = 396
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 86/204 (42%), Gaps = 19/204 (9%)
Query: 97 KVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIF-GNEEFVSMAEI 155
+ + + +C+P NP G+++ + E+ D + + SDE Y F GN+ + +
Sbjct: 168 RTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNK---PLGCL 224
Query: 156 LEAEEVDKDRVHIIY--GLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCS-ISAPTQR 212
A ++ + R ++ LS ++PG R+G + E + T S S P QR
Sbjct: 225 QAAAQLGRSRQKLLXFTSLSXRSNVPGLRSGFVAGDAELLKNFLLYRTYHGSAXSIPVQR 284
Query: 213 LLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPS 272
I+ D ++++ N+R ++ ++ + L+Q+ A Y W +
Sbjct: 285 ASIAAWDD----EQHVIDNRRLYQEKFERVIPILQQV-FDVKLPDASFYIWLKV------ 333
Query: 273 YSEKGELELWDKLLNIAKINVTPG 296
+ +L L A I V PG
Sbjct: 334 -PDGDDLAFARNLWQKAAIQVLPG 356
>pdb|1LKC|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Salmonella Enterica
pdb|1LC5|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica In Its Apo State
pdb|1LC7|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With A
Substrate
pdb|1LC8|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With Its
Reaction Intermediate
Length = 364
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 101 ILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160
+ +C P NP G + R L + D + NI++I DE + I F+ +
Sbjct: 150 LFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALK------ 203
Query: 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISA 208
D + ++ L+K ++PG R G + + +++ +A ++ S++A
Sbjct: 204 -DNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQMPWSVNA 250
>pdb|3HDO|A Chain A, Crystal Structure Of A Histidinol-Phosphate
Aminotransferase From Geobacter Metallireducens
pdb|3HDO|B Chain B, Crystal Structure Of A Histidinol-Phosphate
Aminotransferase From Geobacter Metallireducens
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 97/250 (38%), Gaps = 38/250 (15%)
Query: 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGV 64
+ +V G+ FDPS I+ G+ + L A G + P Y + T
Sbjct: 70 LREVAGELYGFDPSWIIXANGSDEVLNNLIRAFAAEGEEIGYVHPSYSYYG------TLA 123
Query: 65 ELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLD 124
E+ R+ F +T + + KV + P P+G P E + EL
Sbjct: 124 EVQGARVRT-----FGLTGDFRIAGFPERYEGKV--FFLTTPNAPLGPSFPLEYIDEL-- 174
Query: 125 FAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVH----IIYGLSKDLSLPG 180
AR ++ DE Y AE E+ ++ R H + LSK SL G
Sbjct: 175 -ARRCAGXLVLDETY-------------AEFAESNALELVRRHENVVVTRTLSKSYSLAG 220
Query: 181 FRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYD 240
R G+ + E V+AA K+ ++ Q ++ L D Q YL RRI++ +
Sbjct: 221 XRIGLAIARPE-VIAALDKIRDHYNLDRLAQAACVAALRD----QAYLSECCRRIRETRE 275
Query: 241 SFVAGLKQLG 250
F L+ +G
Sbjct: 276 WFTTELRSIG 285
>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana
pdb|4FL0|B Chain B, Crystal Structure Of Ald1 From Arabidopsis Thaliana
Length = 456
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 85/212 (40%), Gaps = 33/212 (15%)
Query: 101 ILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160
I C+P NP G + R+ L++L+DFA+ +I D Y I S+ EI A E
Sbjct: 216 IFFCSPNNPTGYVASRKQLHQLVDFAKTNGSIIIFDSAYAAFIEDGSP-RSIYEIPGARE 274
Query: 161 VDKDRVHIIYGLSKDLSLPGFRTG-------VIYSYNESVLAAAKKL--TRFCSISAPTQ 211
V + + SK G R G ++YS ++ ++ T F S Q
Sbjct: 275 VAIE----VSSFSKFAGFTGVRLGWSIIPDELLYSNGFPIINDFHRIVTTSFNGASNIAQ 330
Query: 212 RLLISMLS-----DTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADM 266
++ LS + + + Y + N+ K L D+ V+ LG++ Y W
Sbjct: 331 AGGLACLSSGGLKEIRSVNNYYKENR---KILMDTLVS----LGLKVYGGVNAPYLWVHF 383
Query: 267 SGLIPSYSEKGELELWDKLLNIAKINVTPGSA 298
G ++++++L I PGS
Sbjct: 384 KG-------SKSWDVFNEILENTHIITVPGSG 408
>pdb|1C7N|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7O|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
Length = 399
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 7/121 (5%)
Query: 20 IVLTAGATPAVEILCFCLADHGNALLVPSP-YYPGFDRDIRFRTGVELIPVHCRSTDNFA 78
I+ TAG PAV G+ +++ +P YYP F + + I + C +
Sbjct: 92 IINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFF---MAIKNQERKI-IECELLEKDG 147
Query: 79 FSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEI 138
+ + ++ + K +L C+P NPVG + ++ L ++ D + ++ + SDEI
Sbjct: 148 YYTIDFQKLEKLSKDKNNK--ALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEI 205
Query: 139 Y 139
+
Sbjct: 206 H 206
>pdb|1D2F|A Chain A, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
pdb|1D2F|B Chain B, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
Length = 390
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/149 (19%), Positives = 61/149 (40%), Gaps = 12/149 (8%)
Query: 11 QAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVH 70
Q V + PS I + V L ++ G +++ +P Y F + I +
Sbjct: 88 QTVVYGPSVIYM-------VSELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVAL 140
Query: 71 CRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKN 130
+ D + + L+ + + + +L+C+P NP G + + L + D
Sbjct: 141 EKQADGWFCDMGKLEAVLAKP-----ECKIMLLCSPQNPTGKVWTCDELEIMADLCERHG 195
Query: 131 IHVISDEIYGGSIFGNEEFVSMAEILEAE 159
+ VISDEI+ ++G + + + + +
Sbjct: 196 VRVISDEIHMDMVWGEQPHIPWSNVARGD 224
>pdb|1U08|A Chain A, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function.
pdb|1U08|B Chain B, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function
Length = 386
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 82/208 (39%), Gaps = 25/208 (12%)
Query: 18 SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGV----ELIPVHCR- 72
S I +TAGAT A+ L +G+ ++ P Y + I G+ L P H R
Sbjct: 92 SDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRV 151
Query: 73 STDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIH 132
FA ++ + R +++ P NP + + L I
Sbjct: 152 DWQEFAALLSE-------------RTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIF 198
Query: 133 VISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNES 192
VISDE+Y F + A +L ++ ++R + K + G++ G +
Sbjct: 199 VISDEVYEHINFSQQ---GHASVLAHPQL-RERAVAVSSFGKTYHMTGWKVGYCVA-PAP 253
Query: 193 VLAAAKKLTRFC--SISAPTQRLLISML 218
+ A +K+ ++ S++ P Q L ML
Sbjct: 254 ISAEIRKVHQYLTFSVNTPAQLALADML 281
>pdb|3P1T|A Chain A, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|B Chain B, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|C Chain C, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|D Chain D, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
Length = 337
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 71/176 (40%), Gaps = 35/176 (19%)
Query: 101 ILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIY--------GGSIFGNEEFVSM 152
+++ NP+NP G + L +L R++ ++ DE Y G +G E V
Sbjct: 139 VVLANPSNPTGQALSAGELDQL----RQRAGKLLIDETYVDYSSFRARGLAYGENELV-- 192
Query: 153 AEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQR 212
SK L G R G ++ +E ++AA K+ FC++
Sbjct: 193 ----------------FRSFSKSYGLAGLRLGALFGPSE-LIAAXKRKQWFCNVGTLDLH 235
Query: 213 LLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSG 268
L + L + + + ++ + +++ D+ L+ LG R + S A + +G
Sbjct: 236 ALEAALDNDRAREAHIAKTLAQRRRVADA----LRGLGYRVASSEANFVLVENAAG 287
>pdb|3IF2|A Chain A, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
pdb|3IF2|B Chain B, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
Length = 444
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 78/183 (42%), Gaps = 22/183 (12%)
Query: 91 ARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFV 150
A K G ++ I P NP GN++ E L + A+ +I +I D YG F
Sbjct: 201 ALKEG-RIGAICCSRPTNPTGNVLTDEEXAHLAEIAKRYDIPLIIDNAYG------XPFP 253
Query: 151 SMAEILEAEEVDKDRVHII-YGLSKDLSLPGFRTGVIYSYNESVLAAAK-------KLTR 202
++ I ++ D I+ + LSK + LPG RTG+I + + + A + TR
Sbjct: 254 NI--IYSDAHLNWDNNTILCFSLSK-IGLPGXRTGIIVADAKVIEAVSAXNAVVNLAPTR 310
Query: 203 F-CSISAP-TQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGL 260
F +I+ P I LSD + Y + +K L + G L I E + L
Sbjct: 311 FGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQAL--GDYPLXIHKPEGAIFL 368
Query: 261 YCW 263
+ W
Sbjct: 369 WLW 371
>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
pdb|2Z20|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
Length = 432
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 101 ILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160
I C+P NP G RE L +L++FA++ ++ D Y ++ S+ EI AEE
Sbjct: 202 IFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAY-AXYXSDDNPRSIFEIPGAEE 260
Query: 161 VDKDRVHIIYGLSKDLSLPGFRTG 184
V + SK G R G
Sbjct: 261 VAXETAS----FSKYAGFTGVRLG 280
>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|2Z1Z|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|3EI5|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI5|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI6|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI6|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI7|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
pdb|3EI7|B Chain B, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
Length = 432
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 101 ILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160
I C+P NP G RE L +L++FA++ ++ D Y ++ S+ EI AEE
Sbjct: 202 IFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAY-AMYMSDDNPRSIFEIPGAEE 260
Query: 161 VDKDRVHIIYGLSKDLSLPGFRTG 184
V + SK G R G
Sbjct: 261 VAMETA----SFSKYAGFTGVRLG 280
>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
pdb|3EIA|B Chain B, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
Length = 432
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 101 ILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160
I C+P NP G RE L +L++FA++ ++ D Y ++ S+ EI AEE
Sbjct: 202 IFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAY-AMYMSDDNPRSIFEIPGAEE 260
Query: 161 V 161
V
Sbjct: 261 V 261
>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI8|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI9|A Chain A, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EI9|B Chain B, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EIB|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
pdb|3EIB|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
Length = 432
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 101 ILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160
I C+P NP G RE L +L++FA++ ++ D Y ++ S+ EI AEE
Sbjct: 202 IFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAY-AMYMSDDNPRSIFEIPGAEE 260
Query: 161 V 161
V
Sbjct: 261 V 261
>pdb|3QGU|A Chain A, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
pdb|3QGU|B Chain B, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
Length = 449
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 91/244 (37%), Gaps = 35/244 (14%)
Query: 101 ILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160
I C+P NP G R L EL++FAR+ ++ D Y I + ++ EI A+E
Sbjct: 213 IFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADE 272
Query: 161 VDKDRVHIIYGLSKDLSLPGFRTG-------VIYSYNESVLAAAKKLTRFCSISAPT--- 210
V + SK G R G + Y+ E V A ++ C A
Sbjct: 273 VAIETCS----FSKYAGFTGVRLGWTVVPKALKYANGEPVHADWNRVMTTCFNGASNIVQ 328
Query: 211 ----QRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADM 266
L L + + ++ + N + +K + ++G Y W
Sbjct: 329 AGGLACLQPEGLKEMNAMIKFYKENAQILKTTF-------TEMGFSVYGGDDAPYIWVGF 381
Query: 267 SGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRC-CFTSLTHEDIPLVIER 325
G PS+ +++ ++L I TPGS G+ R F S E+I + R
Sbjct: 382 PGK-PSW------DVFAEILERCNIVTTPGSGYGPAGEGFVRASAFGS--RENILEAVRR 432
Query: 326 IQKV 329
++
Sbjct: 433 FKEA 436
>pdb|1WST|A Chain A, Crystal Structure Of Multiple Substrate Aminotransferase
(Msat) From Thermococcus Profundus
Length = 417
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 139/334 (41%), Gaps = 50/334 (14%)
Query: 19 QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFA 78
+I+ AG+ A++++ + G+ ++V +P Y + ++ E I + D+
Sbjct: 108 EIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYLAAIQAFKYYDP-EFISIPL---DDKG 163
Query: 79 FSITALDQAFNQARKRGVKVRGILICNP-ANPVGNIIPRETLYELLDFAREKNIHVISDE 137
+ L++ + RK+G +V+ + + NP G + + +LL+ A E + ++ D
Sbjct: 164 MRVDLLEEKLEELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRKKLLELANEYDFLIVEDG 223
Query: 138 IYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAA 197
Y + E + D RV + SK L+ PGFR G + AA
Sbjct: 224 PYSELRYSGEPTPPIKHF-----DDYGRVIYLGTFSKILA-PGFRIGWV--------AAH 269
Query: 198 KKLTRFCSISAPTQRLLISMLSDT---KFIQE-YLETNKRRIKKLY----DSFVAGLKQL 249
L R I+ + L + K+++ YL+ + +I + Y D+ + L++
Sbjct: 270 PHLIRKMEIAKQSIDLCTNTFGQAIAWKYVENGYLDEHIPKIIEFYKPRRDAMLEALEEY 329
Query: 250 ---GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLL---NIAK-INVTPGSA--CH 300
G+ ++ G++ + I + KL+ +AK + PG A H
Sbjct: 330 MPEGVEWTKPEGGMFVRVTLPEGIDT-----------KLMMERAVAKGVAYVPGEAFFVH 378
Query: 301 CIEPGWFRCCFTSLTHEDIPLVIERIQKVAETCK 334
+ R FT + E I E ++++AET K
Sbjct: 379 RDKKNTMRLNFTYVPEETIR---EGVRRLAETIK 409
>pdb|2ZY2|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 544
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 61/133 (45%), Gaps = 17/133 (12%)
Query: 67 IPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFA 126
+P+H + + +S LD+ + V+ NP+NP + + +L +
Sbjct: 220 VPIHADPDNGWQYSDAELDKL------KDPDVKIFFCVNPSNPPSVKMDQRSLDRVRAIV 273
Query: 127 REK--NIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTG 184
E+ ++ +++D++YG F +E F S+ + + ++Y SK G+R G
Sbjct: 274 AEQRPDLLILTDDVYG--TFADE-FQSLFSVCPRNTL------LVYSFSKYFGATGWRLG 324
Query: 185 VIYSYNESVLAAA 197
VI ++ ++V A
Sbjct: 325 VIAAHKDNVFDHA 337
>pdb|3LY1|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|B Chain B, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|C Chain C, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|D Chain D, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
Length = 354
Score = 34.7 bits (78), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 51/121 (42%), Gaps = 8/121 (6%)
Query: 20 IVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAF 79
I+LTAG++ + A L++P Y G G ++ V + DN+AF
Sbjct: 71 ILLTAGSSEGIRAAIEAYASLEAQLVIPELTY-GDGEHFAKIAGXKVTKV--KXLDNWAF 127
Query: 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIY 139
I L A A G + + + NP NP G I P + + E ++ N I DE Y
Sbjct: 128 DIEGLKAAV--AAYSGPSI--VYLVNPNNPTGTITPADVI-EPWIASKPANTXFIVDEAY 182
Query: 140 G 140
Sbjct: 183 A 183
>pdb|3FKD|A Chain A, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|B Chain B, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|C Chain C, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|D Chain D, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
Length = 350
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 13/86 (15%)
Query: 103 ICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVD 162
+CNP NP G ++ R + LL+ + + D+ Y F EE + A+I
Sbjct: 135 LCNPNNPDGRLLQRTEILRLLN--DHPDTTFVLDQSYVS--FTTEEVIRPADI------- 183
Query: 163 KDRVHI--IYGLSKDLSLPGFRTGVI 186
K R ++ +Y S +PG R G I
Sbjct: 184 KGRKNLVXVYSFSHAYGIPGLRIGYI 209
>pdb|1UU1|A Chain A, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|B Chain B, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|C Chain C, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|D Chain D, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU2|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU2|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
Length = 335
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 67/163 (41%), Gaps = 24/163 (14%)
Query: 101 ILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160
+ I NP NP G++ RE + +L + V DE Y F E +V + E
Sbjct: 142 VFIPNPNNPTGHVFEREEIERIL----KTGAFVALDEAYYE--FHGESYVDFLKKYE--- 192
Query: 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSD 220
+ +I SK SL R G + + +E + A ++ ++S +Q L
Sbjct: 193 ----NLAVIRTFSKAFSLAAQRVGYVVA-SEKFIDAYNRVRLPFNVSYVSQMFAKVALDH 247
Query: 221 TKFIQE---YLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGL 260
+ +E ++ + R+K + L+++G R ++S
Sbjct: 248 REIFEERTKFIVEERERMK-------SALREMGYRITDSRGNF 283
>pdb|3F6T|A Chain A, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
pdb|3F6T|B Chain B, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
Length = 533
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 70/172 (40%), Gaps = 24/172 (13%)
Query: 23 TAGATPAVEILCFCLADH-----GNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNF 77
T G T A+ LA++ G+ + + P + + R + EL+ V S +
Sbjct: 170 TEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELK-DYELVEVDLHSYEKN 228
Query: 78 AFSITALDQAFNQARK-RGVKVRGILICNPANPVGNIIPRETLYELLDFAREKN--IHVI 134
+ I N+ K + ++ +++ NP NP L + A EKN + +I
Sbjct: 229 DWEIEP-----NEIEKLKDPSIKALIVVNPTNPTSKEFDTNAL-NAIKQAVEKNPKLXII 282
Query: 135 SDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVI 186
SDE+YG + F S+ ++ ++Y S G+R GVI
Sbjct: 283 SDEVYGAFV---PNFKSIYSVVPY------NTXLVYSYSXLFGCTGWRLGVI 325
>pdb|2F8J|A Chain A, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|B Chain B, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|C Chain C, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|D Chain D, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
Length = 347
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 67/163 (41%), Gaps = 24/163 (14%)
Query: 101 ILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160
+ I NP NP G++ RE + +L + V DE Y F E +V + E
Sbjct: 154 VFIPNPNNPTGHVFEREEIERIL----KTGAFVALDEAYYE--FHGESYVDFLKKYE--- 204
Query: 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSD 220
+ +I SK SL R G + + +E + A ++ ++S +Q L
Sbjct: 205 ----NLAVIRTFSKAFSLAAQRVGYVVA-SEKFIDAYNRVRLPFNVSYVSQMFAKVALDH 259
Query: 221 TKFIQE---YLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGL 260
+ +E ++ + R+K + L+++G R ++S
Sbjct: 260 REIFEERTKFIVEERERMK-------SALREMGYRITDSRGNF 295
>pdb|2ZY3|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 546
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 65/138 (47%), Gaps = 19/138 (13%)
Query: 63 GVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILIC-NPANPVGNIIPRETLYE 121
+E + ++ + N+ + + LD+ + A K I C NP+NP + + +L
Sbjct: 217 ALEEVAINADPSLNWQYPDSELDKLKDPAIK-------IFFCVNPSNPPSVKMDQRSLER 269
Query: 122 LLDFAREK--NIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLP 179
+ + E ++ +++D++YG F ++F S+ I + ++Y SK
Sbjct: 270 VRNIVAEHRPDLMILTDDVYG--TFA-DDFQSLFAIC------PENTLLVYSFSKYFGAT 320
Query: 180 GFRTGVIYSYNESVLAAA 197
G+R GV+ ++ ++V A
Sbjct: 321 GWRLGVVAAHQQNVFDLA 338
>pdb|2ZY5|A Chain A, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|B Chain B, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|C Chain C, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|D Chain D, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|E Chain E, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|F Chain F, R487a Mutant Of L-Aspartate Beta-Decarboxylase
Length = 546
Score = 32.0 bits (71), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 65/138 (47%), Gaps = 19/138 (13%)
Query: 63 GVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILIC-NPANPVGNIIPRETLYE 121
+E + ++ + N+ + + LD+ + A K I C NP+NP + + +L
Sbjct: 217 ALEEVAINADPSLNWQYPDSELDKLKDPAIK-------IFFCVNPSNPPSVKMDQRSLER 269
Query: 122 LLDFAREK--NIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLP 179
+ + E ++ +++D++YG F ++F S+ I + ++Y SK
Sbjct: 270 VRNIVAEHRPDLMILTDDVYG--TFA-DDFQSLFAIC------PENTLLVYSFSKYFGAT 320
Query: 180 GFRTGVIYSYNESVLAAA 197
G+R GV+ ++ ++V A
Sbjct: 321 GWRLGVVAAHQQNVFDLA 338
>pdb|3FDD|A Chain A, The Crystal Structure Of The Pseudomonas Dacunhae
Aspartate-Beta- Decarboxylase Reveals A Novel Oligomeric
Assembly For A Pyridoxal-5- Phosphate Dependent Enzyme
Length = 533
Score = 32.0 bits (71), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 19/138 (13%)
Query: 63 GVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILIC-NPANPVGNIIPRETLYE 121
+E + ++ N+ + + LD+ + A K I C NP+NP + +L
Sbjct: 217 ALEEVAINADPALNWQYPDSELDKLKDPAIK-------IFFCVNPSNPPSVKMDERSLER 269
Query: 122 LLDFAREK--NIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLP 179
+ E ++ +++D++YG G F S+ I A + ++Y SK
Sbjct: 270 VRKIVAEHRPDLMILTDDVYGTFADG---FQSLFAICPANTL------LVYSFSKYFGAT 320
Query: 180 GFRTGVIYSYNESVLAAA 197
G+R GV+ ++ E++ A
Sbjct: 321 GWRLGVVAAHKENIFDLA 338
>pdb|4EMY|A Chain A, Crystal Structure Of Aminotransferase From Anaerococcus
Prevotii Dsm 20548.
pdb|4EMY|B Chain B, Crystal Structure Of Aminotransferase From Anaerococcus
Prevotii Dsm 20548.
pdb|4EMY|C Chain C, Crystal Structure Of Aminotransferase From Anaerococcus
Prevotii Dsm 20548.
pdb|4EMY|D Chain D, Crystal Structure Of Aminotransferase From Anaerococcus
Prevotii Dsm 20548
Length = 413
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 2/105 (1%)
Query: 21 VLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFS 80
+ T G T A+ F D G+ L+ Y+ + R I G TD+FAF+
Sbjct: 105 IATPGGTGAIRSAIFSYLDEGDPLICHDYYWAPY-RKICEEFGRNFKTFEF-FTDDFAFN 162
Query: 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDF 125
I +A ++ + ++ ++ NP G + E E++ F
Sbjct: 163 IDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITF 207
>pdb|3GET|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Np_281508.1) From Campylobacter Jejuni
At 2.01 A Resolution
pdb|3GET|B Chain B, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Np_281508.1) From Campylobacter Jejuni
At 2.01 A Resolution
Length = 365
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 114/287 (39%), Gaps = 35/287 (12%)
Query: 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGV 64
+ L Q I++ AG+ +E + NA L + ++ + + G
Sbjct: 70 LKSTLAQKYKVQNENIIIGAGSDQVIEFAIHSKLNSKNAFLQAGVTFAXYEIYAK-QCGA 128
Query: 65 ELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLD 124
+ C T + ++ + + + K +K+ I +C P NP+G + E +
Sbjct: 129 K-----CYKTQSITHNLDEFKKLY-ETHKDEIKL--IFLCLPNNPLGECLDASEATEFIK 180
Query: 125 FAREKNIHVISDEIYGGSIFGNEEFVSMAEI---LEAEEVDKDRVHIIY--GLSKDLSLP 179
E + VI D Y EF S + LE E+ K+ +++Y S L
Sbjct: 181 GVNEDCLVVI-DAAYN-------EFASFKDSKKHLEPCELIKEFDNVLYLGTFSXLYGLG 232
Query: 180 GFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLY 239
G R G + N ++++A KL ++S + ++ D +F ++ LE N + +LY
Sbjct: 233 GLRIGYGIA-NANIISAFYKLRAPFNVSNLALKAAVAAXDDDEFTEKTLENNFSQX-ELY 290
Query: 240 DSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLL 286
F K+ I+ +S + + EK +L +KLL
Sbjct: 291 KEFA---KKHNIKIIDSYTNFITYF--------FDEKNSTDLSEKLL 326
>pdb|1H1C|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
Length = 335
Score = 31.2 bits (69), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 64/166 (38%), Gaps = 32/166 (19%)
Query: 101 ILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160
+ I NP NP G++ RE + +L + V DE Y F E +V + E
Sbjct: 142 VFIPNPNNPTGHVFEREEIERIL----KTGAFVALDEAYYE--FHGESYVDFLKKYE--- 192
Query: 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSD 220
+ +I SK SL R G + + +E + A ++ ++S +Q L
Sbjct: 193 ----NLAVIRTFSKAFSLAAQRVGYVVA-SEKFIDAYNRVRLPFNVSYVSQXFAKVALDH 247
Query: 221 -------TKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAG 259
TKFI E E K + L++ G R ++S
Sbjct: 248 REIFEERTKFIVEERERXK-----------SALREXGYRITDSRGN 282
>pdb|1W63|A Chain A, Ap1 Clathrin Adaptor Core
pdb|1W63|C Chain C, Ap1 Clathrin Adaptor Core
pdb|1W63|E Chain E, Ap1 Clathrin Adaptor Core
pdb|1W63|G Chain G, Ap1 Clathrin Adaptor Core
pdb|1W63|I Chain I, Ap1 Clathrin Adaptor Core
pdb|1W63|K Chain K, Ap1 Clathrin Adaptor Core
Length = 618
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 110 VGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEE---FVSMAEILEAEEVDKDRV 166
VGN I ET+ ++D E + V++ I G + N++ +V++ +L+ + D + V
Sbjct: 289 VGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAV 348
Query: 167 H 167
Sbjct: 349 Q 349
>pdb|3IAL|A Chain A, Giardia Lamblia Prolyl-Trna Synthetase In Complex With
Prolyl- Adenylate
pdb|3IAL|B Chain B, Giardia Lamblia Prolyl-Trna Synthetase In Complex With
Prolyl- Adenylate
Length = 518
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 23/92 (25%)
Query: 224 IQEYLETNKRRIKK----LYDSFVAGLKQLG--IRCSESSAGLYCWADMSGLIPSYSEKG 277
I++ L+ K R+K+ ++S V K + C E+ GL P Y+ +
Sbjct: 417 IKDELDAYKARLKEKAFAFHNSMVTNCKSFDEIVACIENKGGL-------ARFPFYTTEA 469
Query: 278 ELELWDKLLNIA----------KINVTPGSAC 299
+ E+WDK L A NV PG C
Sbjct: 470 DGEVWDKKLKDACSAEIRGHNPDENVLPGEVC 501
>pdb|2WZP|P Chain P, Structures Of Lactococcal Phage P2 Baseplate Shed Light On
A Novel Mechanism Of Host Attachment And Activation In
Siphoviridae
pdb|2WZP|Q Chain Q, Structures Of Lactococcal Phage P2 Baseplate Shed Light On
A Novel Mechanism Of Host Attachment And Activation In
Siphoviridae
Length = 326
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 112 NIIPRETLYELLDFAREKNIHVIS--DEIYGGSIFGNEEFVSMAEILEAEEVDKDRV 166
+II + YE L F + +N VI+ +IYGG+ GN +++ E D DR+
Sbjct: 159 DIITKWYTYENLTFDKIQNGKVIAGMSKIYGGTAPGNYKYIKGTSYTYYGESDIDRL 215
>pdb|2X53|S Chain S, Structure Of The Phage P2 Baseplate In Its Activated
Conformation With Sr
pdb|2X53|T Chain T, Structure Of The Phage P2 Baseplate In Its Activated
Conformation With Sr
pdb|2X53|U Chain U, Structure Of The Phage P2 Baseplate In Its Activated
Conformation With Sr
pdb|2X53|V Chain V, Structure Of The Phage P2 Baseplate In Its Activated
Conformation With Sr
pdb|2X53|W Chain W, Structure Of The Phage P2 Baseplate In Its Activated
Conformation With Sr
pdb|2X53|X Chain X, Structure Of The Phage P2 Baseplate In Its Activated
Conformation With Sr
Length = 298
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 112 NIIPRETLYELLDFAREKNIHVIS--DEIYGGSIFGNEEFVSMAEILEAEEVDKDRV 166
+II + YE L F + +N VI+ +IYGG+ GN +++ E D DR+
Sbjct: 131 DIITKWYTYENLTFDKIQNGKVIAGMSKIYGGTAPGNYKYIKGTSYTYYGESDIDRL 187
>pdb|2X54|S Chain S, Structure Of The Phage P2 Baseplate In Its Activated
Conformation With Ca (Part 1 Of 2)
pdb|2X54|T Chain T, Structure Of The Phage P2 Baseplate In Its Activated
Conformation With Ca (Part 1 Of 2)
pdb|2X54|U Chain U, Structure Of The Phage P2 Baseplate In Its Activated
Conformation With Ca (Part 1 Of 2)
pdb|2X54|V Chain V, Structure Of The Phage P2 Baseplate In Its Activated
Conformation With Ca (Part 1 Of 2)
pdb|2X54|W Chain W, Structure Of The Phage P2 Baseplate In Its Activated
Conformation With Ca (Part 1 Of 2)
pdb|2X54|X Chain X, Structure Of The Phage P2 Baseplate In Its Activated
Conformation With Ca (Part 1 Of 2)
pdb|2X5A|S Chain S, Structure Of The Phage P2 Baseplate In Its Activated
Conformation With Ca (Part 2 Of 2)
pdb|2X5A|T Chain T, Structure Of The Phage P2 Baseplate In Its Activated
Conformation With Ca (Part 2 Of 2)
pdb|2X5A|U Chain U, Structure Of The Phage P2 Baseplate In Its Activated
Conformation With Ca (Part 2 Of 2)
pdb|2X5A|V Chain V, Structure Of The Phage P2 Baseplate In Its Activated
Conformation With Ca (Part 2 Of 2)
pdb|2X5A|W Chain W, Structure Of The Phage P2 Baseplate In Its Activated
Conformation With Ca (Part 2 Of 2)
pdb|2X5A|X Chain X, Structure Of The Phage P2 Baseplate In Its Activated
Conformation With Ca (Part 2 Of 2)
Length = 298
Score = 28.5 bits (62), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 112 NIIPRETLYELLDFAREKNIHVIS--DEIYGGSIFGNEEFVSMAEILEAEEVDKDRV 166
+II + YE L F + +N VI+ +IYGG+ GN +++ E D DR+
Sbjct: 131 DIITKWYTYENLTFDKIQNGKVIAGMSKIYGGTAPGNYKYIKGTSYTYYGESDIDRL 187
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.139 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,755,397
Number of Sequences: 62578
Number of extensions: 405172
Number of successful extensions: 1087
Number of sequences better than 100.0: 91
Number of HSP's better than 100.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 974
Number of HSP's gapped (non-prelim): 91
length of query: 334
length of database: 14,973,337
effective HSP length: 99
effective length of query: 235
effective length of database: 8,778,115
effective search space: 2062857025
effective search space used: 2062857025
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)