Query 019899
Match_columns 334
No_of_seqs 112 out of 1774
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 05:25:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019899.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019899hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0436 Aspartate/tyrosine/aro 100.0 2.5E-53 5.4E-58 378.2 33.8 312 1-333 74-392 (393)
2 KOG0256 1-aminocyclopropane-1- 100.0 1.2E-52 2.5E-57 352.7 35.1 331 1-331 130-460 (471)
3 PLN02607 1-aminocyclopropane-1 100.0 2.4E-52 5.1E-57 379.1 38.0 334 1-334 104-439 (447)
4 PLN02376 1-aminocyclopropane-1 100.0 1E-51 2.2E-56 378.8 38.8 333 1-333 103-439 (496)
5 PLN02450 1-aminocyclopropane-1 100.0 1.5E-51 3.2E-56 376.7 38.2 332 1-332 95-430 (468)
6 PRK07681 aspartate aminotransf 100.0 7.7E-49 1.7E-53 354.6 34.2 304 1-328 78-384 (399)
7 PRK08636 aspartate aminotransf 100.0 2.8E-48 6E-53 351.2 35.8 319 1-334 80-402 (403)
8 COG1168 MalY Bifunctional PLP- 100.0 2.9E-48 6.2E-53 325.8 30.8 314 1-334 69-388 (388)
9 PRK06207 aspartate aminotransf 100.0 6.8E-48 1.5E-52 348.3 34.9 311 1-334 87-404 (405)
10 PRK07366 succinyldiaminopimela 100.0 3.4E-48 7.3E-53 349.5 31.8 307 1-330 77-388 (388)
11 PLN02187 rooty/superroot1 100.0 1E-47 2.2E-52 350.9 34.1 313 1-333 117-439 (462)
12 PLN00175 aminotransferase fami 100.0 2.9E-47 6.4E-52 344.5 33.5 308 1-332 100-413 (413)
13 PTZ00377 alanine aminotransfer 100.0 6.5E-47 1.4E-51 348.7 36.0 329 1-333 124-476 (481)
14 PRK08068 transaminase; Reviewe 100.0 3.7E-47 7.9E-52 342.7 32.8 305 1-329 79-386 (389)
15 PRK07682 hypothetical protein; 100.0 2.8E-47 6E-52 342.5 32.0 310 1-334 66-378 (378)
16 PLN00145 tyrosine/nicotianamin 100.0 5.5E-47 1.2E-51 344.0 34.1 314 1-334 103-426 (430)
17 PRK06348 aspartate aminotransf 100.0 5.5E-47 1.2E-51 340.9 33.3 305 1-329 75-382 (384)
18 PRK06855 aminotransferase; Val 100.0 6.3E-47 1.4E-51 344.4 33.9 318 1-332 82-429 (433)
19 TIGR03540 DapC_direct LL-diami 100.0 6.5E-47 1.4E-51 340.7 33.0 304 1-328 76-382 (383)
20 PRK13355 bifunctional HTH-doma 100.0 6.4E-47 1.4E-51 351.5 33.5 316 1-334 194-516 (517)
21 PRK09148 aminotransferase; Val 100.0 1.5E-46 3.2E-51 339.8 34.2 312 1-333 77-391 (405)
22 PRK05942 aspartate aminotransf 100.0 1E-46 2.2E-51 340.3 33.0 305 1-329 82-389 (394)
23 PRK09276 LL-diaminopimelate am 100.0 1.1E-46 2.4E-51 339.5 32.6 304 1-328 78-384 (385)
24 PLN02231 alanine transaminase 100.0 4.2E-46 9E-51 343.6 36.7 328 1-332 177-527 (534)
25 PLN00143 tyrosine/nicotianamin 100.0 2.3E-46 4.9E-51 338.8 33.6 313 1-333 83-405 (409)
26 COG1167 ARO8 Transcriptional r 100.0 1.9E-46 4.1E-51 341.3 32.1 306 2-333 142-456 (459)
27 PRK08960 hypothetical protein; 100.0 5.7E-46 1.2E-50 334.7 34.3 305 1-331 78-386 (387)
28 PLN02656 tyrosine transaminase 100.0 8E-46 1.7E-50 335.4 34.8 312 2-333 83-404 (409)
29 PRK08361 aspartate aminotransf 100.0 3.8E-46 8.3E-51 336.3 31.9 308 2-332 80-390 (391)
30 PRK07309 aromatic amino acid a 100.0 1.6E-45 3.6E-50 331.9 35.9 311 2-334 77-390 (391)
31 PRK09147 succinyldiaminopimela 100.0 9.8E-46 2.1E-50 334.2 34.4 307 1-331 74-395 (396)
32 PTZ00433 tyrosine aminotransfe 100.0 9E-46 2E-50 335.6 34.2 304 13-334 100-410 (412)
33 PRK06290 aspartate aminotransf 100.0 8.7E-46 1.9E-50 334.1 33.7 310 1-333 90-406 (410)
34 PRK06107 aspartate aminotransf 100.0 1.1E-45 2.3E-50 334.2 33.3 314 2-334 80-402 (402)
35 PRK08912 hypothetical protein; 100.0 1.2E-45 2.5E-50 332.9 33.1 309 2-332 73-386 (387)
36 PRK12414 putative aminotransfe 100.0 1.1E-45 2.3E-50 332.3 32.0 303 2-328 76-383 (384)
37 PRK05957 aspartate aminotransf 100.0 2.5E-45 5.5E-50 330.4 34.3 307 2-333 75-386 (389)
38 PRK06108 aspartate aminotransf 100.0 1.9E-45 4.1E-50 331.5 33.1 307 2-332 71-382 (382)
39 TIGR01264 tyr_amTase_E tyrosin 100.0 2.2E-45 4.7E-50 332.5 33.0 303 13-333 91-400 (401)
40 PRK07324 transaminase; Validat 100.0 3E-45 6.5E-50 327.8 31.8 292 14-333 77-371 (373)
41 PRK09082 methionine aminotrans 100.0 1.6E-45 3.4E-50 331.6 30.0 304 2-328 77-385 (386)
42 TIGR01265 tyr_nico_aTase tyros 100.0 5.2E-45 1.1E-49 329.9 33.3 312 2-333 83-402 (403)
43 TIGR03537 DapC succinyldiamino 100.0 5.2E-45 1.1E-49 324.2 32.7 298 2-328 46-349 (350)
44 PRK07683 aminotransferase A; V 100.0 9.4E-45 2E-49 326.5 34.2 308 1-333 74-384 (387)
45 TIGR03538 DapC_gpp succinyldia 100.0 8.2E-45 1.8E-49 327.9 33.8 307 1-329 73-392 (393)
46 PRK07337 aminotransferase; Val 100.0 5.9E-45 1.3E-49 328.4 32.9 308 1-330 76-387 (388)
47 PRK07777 aminotransferase; Val 100.0 1.4E-44 3.1E-49 325.8 33.2 309 2-332 71-386 (387)
48 PRK09265 aminotransferase AlaT 100.0 1.9E-44 4.1E-49 326.5 33.6 305 14-334 92-403 (404)
49 KOG0257 Kynurenine aminotransf 100.0 3.1E-46 6.7E-51 316.6 20.3 312 2-327 79-414 (420)
50 PRK07590 L,L-diaminopimelate a 100.0 6.8E-45 1.5E-49 329.8 30.6 299 1-329 85-408 (409)
51 KOG0259 Tyrosine aminotransfer 100.0 2E-44 4.3E-49 300.5 30.5 313 1-333 112-434 (447)
52 PRK15481 transcriptional regul 100.0 1.2E-44 2.5E-49 330.4 31.7 287 16-332 140-431 (431)
53 PRK05764 aspartate aminotransf 100.0 3.5E-44 7.7E-49 324.3 34.5 313 2-334 78-393 (393)
54 PRK08363 alanine aminotransfer 100.0 2.7E-44 5.8E-49 325.1 33.3 308 2-332 80-394 (398)
55 PRK08175 aminotransferase; Val 100.0 3.3E-44 7.3E-49 324.0 33.8 311 1-332 76-389 (395)
56 PRK07550 hypothetical protein; 100.0 9.4E-44 2E-48 320.4 33.3 304 2-329 77-384 (386)
57 PRK07568 aspartate aminotransf 100.0 1.1E-43 2.3E-48 321.6 33.5 307 2-333 76-393 (397)
58 PF00155 Aminotran_1_2: Aminot 100.0 1.6E-44 3.4E-49 323.5 25.0 307 2-326 54-363 (363)
59 PRK05839 hypothetical protein; 100.0 3.1E-43 6.7E-48 315.1 32.1 298 1-331 69-373 (374)
60 PRK06358 threonine-phosphate d 100.0 1.4E-43 3E-48 315.1 29.6 295 4-330 58-353 (354)
61 PRK09275 aspartate aminotransf 100.0 3.1E-43 6.8E-48 320.2 27.6 296 17-333 161-518 (527)
62 PLN02672 methionine S-methyltr 100.0 9.4E-43 2E-47 335.0 32.3 319 1-331 739-1079(1082)
63 TIGR03801 asp_4_decarbox aspar 100.0 9E-43 1.9E-47 316.8 28.3 292 19-333 157-517 (521)
64 TIGR03542 DAPAT_plant LL-diami 100.0 1.7E-42 3.7E-47 313.4 29.2 289 14-329 92-401 (402)
65 PRK01533 histidinol-phosphate 100.0 5.4E-43 1.2E-47 311.8 25.1 287 5-332 69-355 (366)
66 PRK06836 aspartate aminotransf 100.0 1.1E-41 2.3E-46 307.4 33.6 296 2-334 83-393 (394)
67 PRK07865 N-succinyldiaminopime 100.0 5.7E-42 1.2E-46 306.4 30.5 289 1-327 71-363 (364)
68 PTZ00376 aspartate aminotransf 100.0 7.3E-42 1.6E-46 309.3 30.6 290 13-331 91-402 (404)
69 PRK09257 aromatic amino acid a 100.0 9.9E-42 2.2E-46 308.0 30.5 298 2-330 79-396 (396)
70 PRK14809 histidinol-phosphate 100.0 5.4E-42 1.2E-46 305.8 28.4 287 5-331 70-356 (357)
71 PRK06425 histidinol-phosphate 100.0 1.2E-41 2.5E-46 300.3 30.1 289 3-330 43-331 (332)
72 PRK05166 histidinol-phosphate 100.0 6.6E-42 1.4E-46 306.5 28.9 295 5-331 76-370 (371)
73 PRK04781 histidinol-phosphate 100.0 7.3E-42 1.6E-46 305.0 29.0 296 5-331 64-362 (364)
74 PRK03158 histidinol-phosphate 100.0 3.7E-42 8E-47 307.3 26.6 290 5-329 69-358 (359)
75 PRK08056 threonine-phosphate d 100.0 1.1E-41 2.4E-46 303.4 28.8 295 4-331 59-354 (356)
76 PRK08637 hypothetical protein; 100.0 4.3E-41 9.4E-46 302.8 32.9 296 18-334 70-388 (388)
77 PRK02610 histidinol-phosphate 100.0 2.7E-41 5.8E-46 302.8 30.6 295 2-333 76-372 (374)
78 COG0079 HisC Histidinol-phosph 100.0 2.7E-41 5.9E-46 295.9 29.0 293 5-333 62-355 (356)
79 TIGR03539 DapC_actino succinyl 100.0 4.9E-41 1.1E-45 299.4 29.9 288 1-327 65-357 (357)
80 PRK07392 threonine-phosphate d 100.0 5.2E-41 1.1E-45 299.7 30.0 293 5-331 62-358 (360)
81 PLN03026 histidinol-phosphate 100.0 3.9E-41 8.4E-46 301.8 28.8 289 5-329 91-379 (380)
82 PRK08153 histidinol-phosphate 100.0 5.4E-41 1.2E-45 300.1 29.3 295 5-334 72-367 (369)
83 PLN02368 alanine transaminase 100.0 4.9E-41 1.1E-45 301.4 28.9 266 1-269 116-398 (407)
84 PRK01688 histidinol-phosphate 100.0 1.2E-41 2.6E-46 302.3 23.5 288 4-326 61-350 (351)
85 PRK02731 histidinol-phosphate 100.0 6.9E-41 1.5E-45 300.1 28.3 294 5-331 72-365 (367)
86 PRK03317 histidinol-phosphate 100.0 9.6E-41 2.1E-45 298.9 28.5 291 1-332 74-364 (368)
87 PRK09440 avtA valine--pyruvate 100.0 1.3E-40 2.8E-45 302.9 28.8 306 1-333 83-412 (416)
88 PRK06225 aspartate aminotransf 100.0 5.2E-40 1.1E-44 295.5 32.4 303 5-334 71-378 (380)
89 PLN02397 aspartate transaminas 100.0 7.2E-40 1.6E-44 297.1 31.9 273 30-331 131-420 (423)
90 PRK09105 putative aminotransfe 100.0 2.9E-40 6.3E-45 294.9 28.6 287 5-331 83-369 (370)
91 PRK05387 histidinol-phosphate 100.0 1.4E-39 3.1E-44 290.2 28.5 286 4-331 64-352 (353)
92 PRK04870 histidinol-phosphate 100.0 6.9E-40 1.5E-44 292.2 26.2 287 5-330 68-356 (356)
93 PRK14807 histidinol-phosphate 100.0 3.4E-39 7.5E-44 286.8 29.5 287 4-330 63-350 (351)
94 PRK07908 hypothetical protein; 100.0 5.5E-39 1.2E-43 285.6 30.1 285 5-332 63-347 (349)
95 PRK04635 histidinol-phosphate 100.0 1.3E-39 2.8E-44 289.9 25.4 288 3-329 63-352 (354)
96 PRK06959 putative threonine-ph 100.0 1.2E-38 2.6E-43 281.3 29.0 275 5-332 58-333 (339)
97 PRK00950 histidinol-phosphate 100.0 8.5E-39 1.8E-43 286.0 27.6 287 4-330 73-360 (361)
98 PRK05664 threonine-phosphate d 100.0 3E-38 6.5E-43 278.2 29.6 275 5-332 54-328 (330)
99 TIGR01141 hisC histidinol-phos 100.0 1.1E-38 2.4E-43 283.7 26.1 288 4-327 58-346 (346)
100 PRK03321 putative aminotransfe 100.0 9.8E-39 2.1E-43 284.5 25.4 289 5-331 62-350 (352)
101 TIGR01140 L_thr_O3P_dcar L-thr 100.0 6.2E-38 1.3E-42 276.4 26.4 277 5-326 52-329 (330)
102 KOG0634 Aromatic amino acid am 100.0 1.5E-37 3.2E-42 263.8 27.4 307 19-333 126-467 (472)
103 PRK03967 histidinol-phosphate 100.0 7.4E-37 1.6E-41 270.1 26.5 276 5-333 60-335 (337)
104 PRK08354 putative aminotransfe 100.0 3.1E-36 6.8E-41 263.3 28.0 255 18-329 55-309 (311)
105 PRK14808 histidinol-phosphate 100.0 4.5E-36 9.7E-41 264.6 27.7 261 15-329 74-334 (335)
106 cd00609 AAT_like Aspartate ami 100.0 1.3E-34 2.8E-39 258.1 31.6 301 2-327 46-349 (350)
107 KOG0633 Histidinol phosphate a 100.0 6.1E-32 1.3E-36 215.2 25.7 297 5-329 74-374 (375)
108 PRK10874 cysteine sulfinate de 100.0 5.7E-32 1.2E-36 245.1 27.9 293 4-333 67-399 (401)
109 KOG0258 Alanine aminotransfera 100.0 5.1E-32 1.1E-36 226.9 25.0 329 1-333 122-474 (475)
110 TIGR03392 FeS_syn_CsdA cystein 100.0 1.2E-31 2.7E-36 242.7 28.7 292 5-333 65-396 (398)
111 TIGR03576 pyridox_MJ0158 pyrid 100.0 2.7E-31 5.9E-36 233.9 29.5 279 4-330 58-345 (346)
112 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 3.3E-31 7.2E-36 237.1 29.0 298 6-334 57-370 (370)
113 PRK13238 tnaA tryptophanase/L- 100.0 1.4E-30 3.1E-35 236.7 27.7 313 5-332 83-433 (460)
114 cd06451 AGAT_like Alanine-glyo 100.0 5.3E-30 1.1E-34 228.9 28.1 293 4-331 36-356 (356)
115 COG3977 Alanine-alpha-ketoisov 100.0 1.5E-29 3.3E-34 205.4 25.5 304 1-332 83-411 (417)
116 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 3.7E-29 8E-34 223.5 29.4 297 4-330 48-360 (361)
117 TIGR01979 sufS cysteine desulf 100.0 1.9E-29 4.2E-34 228.9 27.4 291 4-333 66-402 (403)
118 PRK09295 bifunctional cysteine 100.0 2.5E-29 5.4E-34 228.1 26.8 290 4-331 71-403 (406)
119 TIGR01822 2am3keto_CoA 2-amino 100.0 4.7E-29 1E-33 225.7 28.5 296 5-333 88-390 (393)
120 PLN02855 Bifunctional selenocy 100.0 1.9E-29 4E-34 230.1 25.8 294 4-333 80-419 (424)
121 PLN02822 serine palmitoyltrans 100.0 1.1E-28 2.3E-33 226.3 30.2 302 5-332 159-477 (481)
122 TIGR02326 transamin_PhnW 2-ami 100.0 1.5E-28 3.3E-33 219.9 29.4 292 5-331 40-361 (363)
123 PRK02948 cysteine desulfurase; 100.0 7.7E-30 1.7E-34 229.7 21.2 292 3-332 46-374 (381)
124 cd00378 SHMT Serine-glycine hy 100.0 1.1E-28 2.4E-33 223.8 27.8 292 9-332 74-385 (402)
125 TIGR00858 bioF 8-amino-7-oxono 100.0 8.9E-29 1.9E-33 221.4 26.4 287 5-327 66-360 (360)
126 PRK06939 2-amino-3-ketobutyrat 100.0 1.7E-28 3.6E-33 222.5 28.3 284 18-333 104-394 (397)
127 PLN02483 serine palmitoyltrans 100.0 1.5E-28 3.2E-33 225.9 28.0 299 5-333 151-467 (489)
128 TIGR03301 PhnW-AepZ 2-aminoeth 100.0 2.6E-28 5.5E-33 218.1 28.3 293 4-330 35-355 (355)
129 cd06454 KBL_like KBL_like; thi 100.0 2.1E-28 4.5E-33 218.1 26.3 292 5-329 51-348 (349)
130 PLN02409 serine--glyoxylate am 100.0 5.1E-28 1.1E-32 218.5 28.6 295 9-333 51-373 (401)
131 PRK13479 2-aminoethylphosphona 100.0 1.2E-27 2.7E-32 214.5 30.2 295 5-333 42-364 (368)
132 TIGR01825 gly_Cac_T_rel pyrido 100.0 9.5E-28 2.1E-32 216.6 29.3 282 17-333 94-382 (385)
133 cd00617 Tnase_like Tryptophana 100.0 4.5E-28 9.9E-33 217.3 26.6 297 17-332 68-408 (431)
134 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 1.1E-27 2.3E-32 215.6 28.1 300 4-333 67-382 (387)
135 PLN02721 threonine aldolase 100.0 2E-27 4.3E-32 212.1 29.5 297 5-332 45-352 (353)
136 cd06453 SufS_like Cysteine des 100.0 3.7E-28 8E-33 218.4 24.6 285 5-326 48-373 (373)
137 PRK05958 8-amino-7-oxononanoat 100.0 1.2E-27 2.5E-32 216.2 27.9 288 6-330 90-385 (385)
138 cd06502 TA_like Low-specificit 100.0 7.2E-28 1.6E-32 213.7 26.1 289 6-328 38-337 (338)
139 TIGR01976 am_tr_V_VC1184 cyste 100.0 6.2E-28 1.3E-32 218.7 25.7 287 4-326 64-397 (397)
140 PRK13392 5-aminolevulinate syn 100.0 1.6E-27 3.4E-32 216.5 26.8 295 5-333 96-398 (410)
141 COG0520 csdA Selenocysteine ly 100.0 2.2E-27 4.7E-32 211.6 26.9 292 5-331 71-404 (405)
142 TIGR03403 nifS_epsilon cystein 100.0 1.3E-27 2.9E-32 215.2 25.8 285 13-333 55-376 (382)
143 PRK07179 hypothetical protein; 100.0 4.5E-27 9.9E-32 213.3 29.1 290 5-333 104-399 (407)
144 PRK13520 L-tyrosine decarboxyl 100.0 2.6E-27 5.7E-32 212.8 27.0 292 5-332 64-371 (371)
145 TIGR03402 FeS_nifS cysteine de 100.0 1.8E-27 3.8E-32 214.3 24.3 290 5-333 47-373 (379)
146 PRK10534 L-threonine aldolase; 100.0 1.5E-27 3.3E-32 211.0 23.5 286 5-332 39-333 (333)
147 TIGR03812 tyr_de_CO2_Arch tyro 100.0 4.6E-27 1E-31 211.3 25.6 291 4-328 63-372 (373)
148 COG1448 TyrB Aspartate/tyrosin 100.0 9.6E-27 2.1E-31 196.4 25.3 280 21-329 98-395 (396)
149 PRK03244 argD acetylornithine 100.0 4.8E-27 1E-31 212.7 25.0 274 17-333 103-395 (398)
150 PF12897 Aminotran_MocR: Alani 100.0 7.1E-27 1.5E-31 197.5 23.8 307 6-331 75-414 (425)
151 PRK02627 acetylornithine amino 100.0 6.8E-27 1.5E-31 211.8 25.5 281 16-333 95-395 (396)
152 TIGR01977 am_tr_V_EF2568 cyste 100.0 4.6E-27 1E-31 211.5 24.1 290 6-328 50-375 (376)
153 COG1104 NifS Cysteine sulfinat 100.0 5.5E-27 1.2E-31 201.6 21.9 293 4-334 48-379 (386)
154 TIGR00707 argD acetylornithine 100.0 2.3E-26 5.1E-31 207.1 27.2 284 6-329 75-378 (379)
155 TIGR01821 5aminolev_synth 5-am 100.0 3.8E-26 8.2E-31 207.0 28.0 295 5-333 95-397 (402)
156 PRK09064 5-aminolevulinate syn 100.0 3.6E-26 7.8E-31 207.5 27.5 295 5-333 96-398 (407)
157 PRK07049 methionine gamma-lyas 100.0 1.6E-25 3.4E-30 202.5 31.5 289 5-332 88-426 (427)
158 PRK01278 argD acetylornithine 100.0 2.8E-26 6E-31 207.0 26.1 280 17-333 88-389 (389)
159 PLN02242 methionine gamma-lyas 100.0 9.8E-26 2.1E-30 203.1 29.2 282 5-333 81-416 (418)
160 cd06450 DOPA_deC_like DOPA dec 100.0 1.7E-26 3.6E-31 205.5 21.7 283 2-328 44-344 (345)
161 TIGR02006 IscS cysteine desulf 100.0 2.2E-26 4.7E-31 208.4 22.4 290 5-333 52-378 (402)
162 PRK13393 5-aminolevulinate syn 99.9 3.3E-25 7.2E-30 200.9 28.2 295 5-333 95-397 (406)
163 PRK08247 cystathionine gamma-s 99.9 6.6E-25 1.4E-29 195.6 29.3 280 5-334 57-366 (366)
164 PRK14012 cysteine desulfurase; 99.9 8E-26 1.7E-30 204.9 23.0 288 5-333 54-380 (404)
165 PRK00011 glyA serine hydroxyme 99.9 6.6E-25 1.4E-29 199.9 28.9 292 8-332 79-389 (416)
166 COG0156 BioF 7-keto-8-aminopel 99.9 9.9E-25 2.2E-29 191.0 27.1 291 5-329 89-387 (388)
167 PRK06234 methionine gamma-lyas 99.9 4.3E-24 9.3E-29 192.2 28.7 279 5-332 69-397 (400)
168 cd00613 GDC-P Glycine cleavage 99.9 1E-24 2.2E-29 197.8 24.6 281 8-326 72-398 (398)
169 PLN02651 cysteine desulfurase 99.9 3E-25 6.6E-30 198.5 20.7 277 5-320 48-364 (364)
170 PRK00451 glycine dehydrogenase 99.9 8.6E-25 1.9E-29 200.8 23.8 280 10-330 122-446 (447)
171 cd00610 OAT_like Acetyl ornith 99.9 1.3E-24 2.7E-29 198.1 24.7 300 5-330 84-413 (413)
172 TIGR01437 selA_rel uncharacter 99.9 2.1E-24 4.6E-29 192.0 25.0 270 17-330 60-363 (363)
173 TIGR02080 O_succ_thio_ly O-suc 99.9 3.9E-24 8.4E-29 191.0 25.9 282 4-332 55-381 (382)
174 TIGR03235 DNA_S_dndA cysteine 99.9 2.9E-25 6.3E-30 198.0 18.3 277 4-319 46-345 (353)
175 PRK08045 cystathionine gamma-s 99.9 9.8E-24 2.1E-28 188.6 28.0 208 4-249 56-269 (386)
176 PRK06460 hypothetical protein; 99.9 2.5E-23 5.4E-28 185.8 29.8 208 4-249 49-261 (376)
177 PRK05093 argD bifunctional N-s 99.9 5.6E-24 1.2E-28 192.6 26.1 274 17-332 97-400 (403)
178 cd00614 CGS_like CGS_like: Cys 99.9 2.3E-23 5E-28 186.2 29.2 208 5-250 45-258 (369)
179 PRK08776 cystathionine gamma-s 99.9 1.7E-23 3.7E-28 188.0 28.3 207 4-249 64-277 (405)
180 PRK04073 rocD ornithine--oxo-a 99.9 6.2E-24 1.3E-28 191.9 25.7 269 17-330 97-395 (396)
181 PRK06767 methionine gamma-lyas 99.9 6.6E-24 1.4E-28 190.4 25.4 279 5-332 66-385 (386)
182 PRK08133 O-succinylhomoserine 99.9 3.9E-23 8.5E-28 185.4 30.1 205 5-249 66-277 (390)
183 PLN03227 serine palmitoyltrans 99.9 2.7E-23 5.8E-28 186.7 28.5 302 5-332 48-382 (392)
184 COG0075 Serine-pyruvate aminot 99.9 1.1E-22 2.5E-27 176.4 30.4 282 18-333 57-364 (383)
185 PRK02936 argD acetylornithine 99.9 1.9E-23 4.2E-28 187.8 26.5 275 18-330 87-377 (377)
186 PRK08861 cystathionine gamma-s 99.9 4.8E-23 1E-27 183.6 28.5 208 4-249 57-270 (388)
187 PRK07504 O-succinylhomoserine 99.9 2.5E-23 5.4E-28 187.0 26.3 282 4-333 69-396 (398)
188 PRK07050 cystathionine beta-ly 99.9 5.4E-23 1.2E-27 184.4 28.4 282 5-332 70-391 (394)
189 PRK07582 cystathionine gamma-l 99.9 7.7E-23 1.7E-27 182.1 28.6 272 4-332 55-365 (366)
190 PRK08249 cystathionine gamma-s 99.9 1E-22 2.2E-27 182.8 29.3 205 5-249 69-280 (398)
191 TIGR02379 ECA_wecE TDP-4-keto- 99.9 3.4E-23 7.4E-28 184.7 25.5 160 16-202 45-208 (376)
192 TIGR01328 met_gam_lyase methio 99.9 9E-23 2E-27 183.0 28.2 280 4-333 63-391 (391)
193 PRK07503 methionine gamma-lyas 99.9 1.7E-22 3.7E-27 181.9 29.7 205 5-249 70-283 (403)
194 PRK07811 cystathionine gamma-s 99.9 7.7E-23 1.7E-27 183.4 26.7 281 5-332 66-388 (388)
195 TIGR01325 O_suc_HS_sulf O-succ 99.9 1.8E-22 4E-27 180.7 28.2 205 5-249 59-270 (380)
196 PRK08064 cystathionine beta-ly 99.9 1.2E-22 2.6E-27 182.3 26.5 208 4-249 58-270 (390)
197 COG1103 Archaea-specific pyrid 99.9 9.1E-23 2E-27 163.9 22.4 302 3-334 65-382 (382)
198 PLN02955 8-amino-7-oxononanoat 99.9 1.9E-22 4.2E-27 180.6 27.2 283 5-332 152-461 (476)
199 PF00266 Aminotran_5: Aminotra 99.9 5E-23 1.1E-27 184.8 23.5 282 5-322 48-371 (371)
200 PTZ00125 ornithine aminotransf 99.9 1.6E-22 3.5E-27 183.4 26.4 284 17-333 88-396 (400)
201 PRK07810 O-succinylhomoserine 99.9 2.2E-22 4.8E-27 180.9 26.9 282 4-330 74-402 (403)
202 TIGR01814 kynureninase kynuren 99.9 1.8E-22 4E-27 183.0 26.7 278 11-330 80-405 (406)
203 PRK08574 cystathionine gamma-s 99.9 7.6E-22 1.6E-26 176.5 29.9 281 5-332 58-384 (385)
204 TIGR01329 cysta_beta_ly_E cyst 99.9 3E-22 6.5E-27 179.0 27.3 280 5-333 52-376 (378)
205 PRK08088 4-aminobutyrate amino 99.9 1.9E-22 4.1E-27 183.5 25.6 295 18-333 103-424 (425)
206 PRK12381 bifunctional succinyl 99.9 2E-22 4.4E-27 182.4 25.5 283 17-333 96-400 (406)
207 PRK07505 hypothetical protein; 99.9 4.7E-22 1E-26 180.1 27.8 289 5-332 96-399 (402)
208 PRK00854 rocD ornithine--oxo-a 99.9 1.9E-22 4.1E-27 182.8 25.0 280 7-331 90-400 (401)
209 TIGR00713 hemL glutamate-1-sem 99.9 2.5E-22 5.4E-27 183.1 24.7 292 17-333 104-423 (423)
210 PRK05968 hypothetical protein; 99.9 6.6E-22 1.4E-26 177.4 26.8 278 4-332 67-386 (389)
211 PRK04260 acetylornithine amino 99.9 4.1E-22 8.9E-27 179.0 25.5 276 19-329 86-374 (375)
212 TIGR01324 cysta_beta_ly_B cyst 99.9 9.4E-22 2E-26 175.1 27.2 279 5-332 55-376 (377)
213 PRK09028 cystathionine beta-ly 99.9 8.8E-22 1.9E-26 175.3 26.9 206 5-249 66-277 (394)
214 PRK08248 O-acetylhomoserine am 99.9 1.4E-21 3.1E-26 176.7 28.6 153 5-189 69-225 (431)
215 PRK05937 8-amino-7-oxononanoat 99.9 8.9E-22 1.9E-26 176.3 26.9 286 5-333 61-351 (370)
216 PRK13580 serine hydroxymethylt 99.9 8E-22 1.7E-26 176.8 24.8 293 11-332 106-445 (493)
217 PRK11658 UDP-4-amino-4-deoxy-L 99.9 9.7E-22 2.1E-26 176.2 24.3 293 4-331 37-378 (379)
218 TIGR01326 OAH_OAS_sulfhy OAH/O 99.9 4.4E-21 9.4E-26 173.8 28.4 154 5-190 62-219 (418)
219 PTZ00094 serine hydroxymethylt 99.9 1.8E-21 3.8E-26 178.3 25.6 295 6-332 86-408 (452)
220 cd00616 AHBA_syn 3-amino-5-hyd 99.9 1.2E-21 2.7E-26 174.7 24.1 283 5-327 23-352 (352)
221 PRK06084 O-acetylhomoserine am 99.9 3.2E-21 6.9E-26 174.3 26.7 154 5-189 63-219 (425)
222 PLN00144 acetylornithine trans 99.9 1.4E-21 3E-26 175.0 24.1 275 17-333 72-381 (382)
223 PRK06702 O-acetylhomoserine am 99.9 6E-21 1.3E-25 171.4 27.4 280 5-332 66-424 (432)
224 PRK04366 glycine dehydrogenase 99.9 2E-21 4.4E-26 178.8 24.9 289 13-332 126-448 (481)
225 PRK07671 cystathionine beta-ly 99.9 1.9E-20 4.2E-25 167.2 30.0 207 4-249 54-266 (377)
226 PRK07269 cystathionine gamma-s 99.9 3.9E-21 8.5E-26 170.5 25.3 278 5-331 59-363 (364)
227 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 4.1E-21 8.9E-26 172.1 25.8 275 17-330 46-374 (375)
228 PRK05967 cystathionine beta-ly 99.9 1.3E-20 2.7E-25 167.6 28.1 271 18-332 80-391 (395)
229 TIGR03246 arg_catab_astC succi 99.9 8.9E-21 1.9E-25 171.2 27.6 275 17-332 92-395 (397)
230 PRK05939 hypothetical protein; 99.9 1.2E-20 2.5E-25 169.3 28.0 153 5-189 52-207 (397)
231 KOG1549 Cysteine desulfurase N 99.9 1.4E-21 3.1E-26 168.9 21.0 160 5-189 90-256 (428)
232 cd00615 Orn_deC_like Ornithine 99.9 1.9E-22 4.1E-27 174.8 15.4 217 8-247 67-293 (294)
233 TIGR00700 GABAtrnsam 4-aminobu 99.9 1.2E-20 2.7E-25 171.3 27.6 293 18-331 95-419 (420)
234 PRK13034 serine hydroxymethylt 99.9 1.9E-20 4.2E-25 169.4 28.7 292 8-332 82-392 (416)
235 PRK06176 cystathionine gamma-s 99.9 1.7E-20 3.8E-25 167.5 27.4 280 5-333 55-379 (380)
236 PLN02509 cystathionine beta-ly 99.9 1.7E-20 3.8E-25 169.9 27.3 267 17-332 148-461 (464)
237 COG2008 GLY1 Threonine aldolas 99.9 8.3E-21 1.8E-25 160.2 22.5 281 18-330 51-341 (342)
238 TIGR01885 Orn_aminotrans ornit 99.9 2.5E-20 5.4E-25 168.8 26.4 278 17-331 94-401 (401)
239 TIGR03531 selenium_SpcS O-phos 99.9 2.5E-20 5.3E-25 167.2 25.9 299 8-329 113-443 (444)
240 PRK09792 4-aminobutyrate trans 99.9 9.3E-20 2E-24 165.3 29.8 290 18-331 102-420 (421)
241 PRK02769 histidine decarboxyla 99.9 4.1E-20 8.9E-25 164.4 25.6 281 9-331 74-371 (380)
242 PRK06918 4-aminobutyrate amino 99.9 1E-19 2.3E-24 166.5 27.6 294 18-332 116-443 (451)
243 PRK08134 O-acetylhomoserine am 99.9 8.3E-20 1.8E-24 165.2 25.8 153 5-188 69-224 (433)
244 TIGR03588 PseC UDP-4-keto-6-de 99.9 9.5E-20 2.1E-24 163.9 25.7 295 5-330 34-380 (380)
245 PRK04612 argD acetylornithine 99.9 1.8E-19 3.8E-24 162.4 27.3 282 18-332 99-403 (408)
246 PLN02624 ornithine-delta-amino 99.9 1.1E-19 2.4E-24 166.8 26.3 281 17-332 132-444 (474)
247 PRK08360 4-aminobutyrate amino 99.9 4.8E-19 1E-23 161.1 30.0 292 16-333 100-427 (443)
248 PRK06777 4-aminobutyrate amino 99.9 2.2E-19 4.9E-24 162.8 27.5 292 17-331 101-420 (421)
249 PRK05994 O-acetylhomoserine am 99.9 2.8E-19 6E-24 162.1 27.7 142 17-188 78-223 (427)
250 PLN02880 tyrosine decarboxylas 99.9 1E-19 2.2E-24 167.0 25.0 315 2-332 128-484 (490)
251 PRK07812 O-acetylhomoserine am 99.9 2E-19 4.4E-24 162.5 26.4 154 5-188 74-230 (436)
252 COG4992 ArgD Ornithine/acetylo 99.9 1.4E-19 3E-24 155.8 23.9 281 8-332 92-398 (404)
253 PF01053 Cys_Met_Meta_PP: Cys/ 99.9 4.4E-19 9.6E-24 157.3 27.9 266 17-331 70-386 (386)
254 PLN02414 glycine dehydrogenase 99.9 1.3E-19 2.8E-24 175.5 26.1 287 18-332 584-907 (993)
255 PRK08114 cystathionine beta-ly 99.9 5.5E-19 1.2E-23 157.0 27.6 271 17-332 77-393 (395)
256 PLN02724 Molybdenum cofactor s 99.9 8.6E-20 1.9E-24 177.4 24.3 307 4-330 82-486 (805)
257 TIGR01788 Glu-decarb-GAD gluta 99.9 1.5E-19 3.3E-24 162.8 24.2 303 3-334 87-431 (431)
258 PLN02590 probable tyrosine dec 99.9 5E-19 1.1E-23 162.5 27.9 315 2-333 176-533 (539)
259 COG0112 GlyA Glycine/serine hy 99.9 3.1E-19 6.6E-24 151.7 23.9 295 8-332 80-390 (413)
260 PRK07495 4-aminobutyrate amino 99.9 1.1E-18 2.5E-23 158.0 29.4 293 18-333 102-422 (425)
261 TIGR02618 tyr_phenol_ly tyrosi 99.9 7.6E-19 1.7E-23 155.5 27.3 302 17-332 86-426 (450)
262 PRK08117 4-aminobutyrate amino 99.9 8.4E-19 1.8E-23 160.0 27.9 295 16-333 102-430 (433)
263 PLN03032 serine decarboxylase; 99.9 3.2E-19 7E-24 157.5 23.1 280 8-328 74-372 (374)
264 COG0399 WecE Predicted pyridox 99.9 1.6E-18 3.5E-23 150.8 27.1 279 16-332 48-373 (374)
265 PRK03080 phosphoserine aminotr 99.8 1.7E-19 3.8E-24 161.6 21.4 283 6-334 54-375 (378)
266 PRK00062 glutamate-1-semialdeh 99.8 3.7E-19 8E-24 161.8 23.7 288 16-333 105-425 (426)
267 PLN02271 serine hydroxymethylt 99.8 1.2E-18 2.5E-23 157.2 26.3 282 18-331 216-539 (586)
268 KOG1368 Threonine aldolase [Am 99.8 1.3E-19 2.8E-24 147.6 18.0 294 4-329 60-365 (384)
269 TIGR01364 serC_1 phosphoserine 99.8 3.8E-19 8.2E-24 157.1 22.6 279 7-333 44-349 (349)
270 PLN03226 serine hydroxymethylt 99.8 1.1E-18 2.4E-23 159.4 26.2 285 13-331 93-418 (475)
271 COG0626 MetC Cystathionine bet 99.8 3E-18 6.4E-23 150.1 27.7 273 16-333 77-395 (396)
272 PRK13237 tyrosine phenol-lyase 99.8 3.9E-18 8.3E-23 151.5 28.5 302 17-332 93-433 (460)
273 PRK15407 lipopolysaccharide bi 99.8 1.8E-18 3.8E-23 157.1 25.7 167 5-201 68-246 (438)
274 PRK05613 O-acetylhomoserine am 99.8 4.6E-18 1E-22 153.7 28.0 153 5-188 74-230 (437)
275 PRK05964 adenosylmethionine--8 99.8 2.9E-18 6.2E-23 156.1 26.7 288 16-333 101-423 (423)
276 KOG2862 Alanine-glyoxylate ami 99.8 8.8E-18 1.9E-22 137.9 26.5 281 19-333 70-383 (385)
277 COG0160 GabT 4-aminobutyrate a 99.8 6.2E-18 1.4E-22 149.9 27.1 296 16-333 116-446 (447)
278 KOG1412 Aspartate aminotransfe 99.8 6.7E-18 1.5E-22 138.5 24.5 277 25-333 107-406 (410)
279 COG0001 HemL Glutamate-1-semia 99.8 5.4E-18 1.2E-22 147.6 24.9 288 16-333 108-429 (432)
280 PRK06058 4-aminobutyrate amino 99.8 1.7E-17 3.7E-22 151.5 29.0 293 18-333 118-443 (443)
281 PF01041 DegT_DnrJ_EryC1: DegT 99.8 1.8E-18 3.9E-23 154.5 22.1 271 17-327 40-363 (363)
282 PF00464 SHMT: Serine hydroxym 99.8 6E-18 1.3E-22 148.8 24.1 270 25-324 94-397 (399)
283 PRK09264 diaminobutyrate--2-ox 99.8 2.1E-17 4.5E-22 150.3 28.3 287 19-332 104-416 (425)
284 TIGR02407 ectoine_ectB diamino 99.8 6.5E-18 1.4E-22 152.8 24.6 286 19-331 100-411 (412)
285 cd01494 AAT_I Aspartate aminot 99.8 4.5E-19 9.7E-24 141.2 14.9 164 5-188 5-169 (170)
286 cd00611 PSAT_like Phosphoserin 99.8 3.4E-18 7.3E-23 152.1 20.7 279 5-330 49-354 (355)
287 PRK06434 cystathionine gamma-l 99.8 6.7E-17 1.5E-21 143.8 28.8 275 5-332 69-384 (384)
288 PRK03715 argD acetylornithine 99.8 1.8E-17 3.8E-22 149.1 24.6 278 17-333 93-394 (395)
289 PRK05355 3-phosphoserine/phosp 99.8 1.1E-17 2.4E-22 148.5 21.6 280 8-334 56-360 (360)
290 PLN02263 serine decarboxylase 99.8 4.5E-17 9.8E-22 146.0 25.5 286 3-331 140-442 (470)
291 PRK15029 arginine decarboxylas 99.8 2.6E-17 5.7E-22 155.5 25.0 225 17-249 221-464 (755)
292 KOG1359 Glycine C-acetyltransf 99.8 1.3E-17 2.9E-22 135.8 19.7 291 5-333 117-413 (417)
293 COG2873 MET17 O-acetylhomoseri 99.8 5.2E-17 1.1E-21 136.8 23.2 141 19-188 79-222 (426)
294 TIGR03372 putres_am_tran putre 99.8 8.9E-17 1.9E-21 145.6 26.4 281 16-330 133-442 (442)
295 KOG0053 Cystathionine beta-lya 99.8 1.6E-16 3.5E-21 137.6 26.4 197 17-249 92-294 (409)
296 TIGR00709 dat 2,4-diaminobutyr 99.8 2.3E-16 4.9E-21 144.0 29.0 289 20-332 105-435 (442)
297 PRK07678 aminotransferase; Val 99.8 1.4E-16 3E-21 145.6 27.5 298 18-334 106-451 (451)
298 TIGR03799 NOD_PanD_pyr putativ 99.8 5.3E-17 1.1E-21 149.4 24.8 291 19-325 161-518 (522)
299 PRK08593 4-aminobutyrate amino 99.8 3.8E-16 8.1E-21 142.5 30.0 290 18-332 104-429 (445)
300 PRK06541 hypothetical protein; 99.8 1.5E-16 3.2E-21 145.5 27.2 293 16-332 111-455 (460)
301 TIGR01366 serC_3 phosphoserine 99.8 1.4E-17 3.1E-22 148.1 20.0 280 6-333 47-361 (361)
302 PRK05769 4-aminobutyrate amino 99.8 3.1E-16 6.7E-21 142.9 28.7 293 17-333 115-440 (441)
303 PRK11522 putrescine--2-oxoglut 99.8 2.3E-16 5E-21 143.9 27.7 299 7-333 131-452 (459)
304 PF01276 OKR_DC_1: Orn/Lys/Arg 99.8 1.6E-18 3.4E-23 153.1 13.0 220 17-247 82-315 (417)
305 PRK07482 hypothetical protein; 99.8 4.3E-16 9.4E-21 142.6 28.0 296 13-332 107-454 (461)
306 PRK05639 4-aminobutyrate amino 99.8 8.9E-16 1.9E-20 140.1 29.3 299 13-332 109-443 (457)
307 PRK13578 ornithine decarboxyla 99.8 2.7E-16 5.8E-21 147.3 24.5 161 17-187 190-366 (720)
308 PRK05965 hypothetical protein; 99.8 7.1E-16 1.5E-20 141.1 26.7 301 6-332 96-447 (459)
309 PRK04311 selenocysteine syntha 99.8 6.7E-16 1.5E-20 140.2 26.1 291 5-331 132-463 (464)
310 KOG1411 Aspartate aminotransfe 99.8 6.6E-17 1.4E-21 134.5 17.5 282 19-331 120-424 (427)
311 KOG1360 5-aminolevulinate synt 99.8 2.1E-16 4.5E-21 134.0 20.3 286 17-332 231-524 (570)
312 PRK12403 putative aminotransfe 99.8 2.2E-15 4.7E-20 138.0 28.4 299 7-333 105-453 (460)
313 PLN02482 glutamate-1-semialdeh 99.8 1.1E-15 2.3E-20 139.7 26.3 280 17-332 155-473 (474)
314 COG0076 GadB Glutamate decarbo 99.8 1.3E-16 2.9E-21 144.2 20.2 247 2-268 107-381 (460)
315 PRK07986 adenosylmethionine--8 99.7 1E-15 2.2E-20 138.6 25.3 291 7-332 93-423 (428)
316 PF04864 Alliinase_C: Allinase 99.7 1.2E-17 2.5E-22 140.1 11.5 280 4-329 54-362 (363)
317 PLN02760 4-aminobutyrate:pyruv 99.7 2E-15 4.4E-20 139.0 27.3 288 16-332 150-491 (504)
318 PRK06062 hypothetical protein; 99.7 1.5E-15 3.3E-20 138.6 26.3 291 16-333 111-446 (451)
319 PRK13360 omega amino acid--pyr 99.7 2.5E-15 5.4E-20 136.9 27.0 290 16-333 105-441 (442)
320 PRK06943 adenosylmethionine--8 99.7 4.6E-15 9.9E-20 135.5 28.8 286 17-332 114-446 (453)
321 PRK06173 adenosylmethionine--8 99.7 1.4E-15 3.1E-20 137.8 25.2 285 13-332 100-425 (429)
322 KOG1357 Serine palmitoyltransf 99.7 4.3E-17 9.4E-22 140.2 14.1 283 18-330 199-500 (519)
323 PRK07046 aminotransferase; Val 99.7 2.3E-15 5E-20 137.3 25.6 277 17-333 130-451 (453)
324 PRK06148 hypothetical protein; 99.7 5.2E-15 1.1E-19 146.9 29.9 301 13-333 676-1011(1013)
325 PRK07481 hypothetical protein; 99.7 5.6E-15 1.2E-19 135.0 27.8 292 17-333 104-446 (449)
326 PRK08742 adenosylmethionine--8 99.7 5.8E-15 1.2E-19 135.1 27.5 292 17-332 129-467 (472)
327 PRK00615 glutamate-1-semialdeh 99.7 3.7E-15 8E-20 135.1 26.0 287 17-332 110-428 (433)
328 PRK06938 diaminobutyrate--2-ox 99.7 7.5E-15 1.6E-19 134.3 28.2 292 19-332 128-460 (464)
329 PRK06105 aminotransferase; Pro 99.7 7.6E-15 1.6E-19 134.4 28.3 295 13-333 105-450 (460)
330 PRK06917 hypothetical protein; 99.7 1.2E-14 2.5E-19 132.7 29.3 305 8-332 82-437 (447)
331 TIGR00508 bioA adenosylmethion 99.7 2.2E-15 4.7E-20 136.9 24.4 282 16-332 104-426 (427)
332 PRK06149 hypothetical protein; 99.7 1.1E-14 2.3E-19 144.6 31.3 304 8-332 632-970 (972)
333 PRK09221 beta alanine--pyruvat 99.7 3.6E-15 7.9E-20 135.9 25.9 290 16-333 108-444 (445)
334 TIGR01365 serC_2 phosphoserine 99.7 1.4E-15 3.1E-20 134.4 22.5 271 20-329 61-370 (374)
335 PRK12389 glutamate-1-semialdeh 99.7 5.9E-15 1.3E-19 134.3 27.0 279 17-332 109-427 (428)
336 PRK06082 4-aminobutyrate amino 99.7 8.2E-15 1.8E-19 134.0 27.2 287 17-332 130-451 (459)
337 PRK05630 adenosylmethionine--8 99.7 9.7E-15 2.1E-19 132.2 26.8 282 16-334 99-422 (422)
338 PRK05367 glycine dehydrogenase 99.7 4.1E-15 8.8E-20 145.1 25.8 297 2-332 548-875 (954)
339 PRK15400 lysine decarboxylase 99.7 2.2E-15 4.8E-20 141.1 23.0 294 18-331 212-558 (714)
340 PRK07036 hypothetical protein; 99.7 1.1E-14 2.3E-19 133.5 27.1 295 13-332 108-452 (466)
341 PRK07030 adenosylmethionine--8 99.7 1.5E-14 3.2E-19 132.5 27.8 290 16-332 106-446 (466)
342 PRK06916 adenosylmethionine--8 99.7 1.8E-14 3.9E-19 131.9 28.3 300 7-333 106-456 (460)
343 PRK07483 hypothetical protein; 99.7 1.8E-14 3.9E-19 131.3 28.0 297 16-332 89-437 (443)
344 PRK04013 argD acetylornithine/ 99.7 5.2E-15 1.1E-19 131.0 22.9 264 17-332 81-360 (364)
345 PF01212 Beta_elim_lyase: Beta 99.7 2.5E-17 5.5E-22 140.8 7.5 225 17-257 44-278 (290)
346 TIGR02617 tnaA_trp_ase tryptop 99.7 1.6E-14 3.4E-19 127.2 24.3 302 17-332 89-441 (467)
347 PRK15399 lysine decarboxylase 99.7 1.4E-14 2.9E-19 135.9 25.5 293 18-331 212-558 (713)
348 PRK07480 putative aminotransfe 99.7 2.1E-14 4.5E-19 131.3 26.0 294 13-333 107-449 (456)
349 PRK06931 diaminobutyrate--2-ox 99.7 3.9E-14 8.3E-19 129.6 27.7 291 20-332 124-454 (459)
350 COG0161 BioA Adenosylmethionin 99.7 1.6E-14 3.4E-19 127.7 24.1 301 5-332 92-443 (449)
351 PRK12566 glycine dehydrogenase 99.7 1.2E-14 2.6E-19 138.9 23.4 263 41-332 591-876 (954)
352 TIGR00474 selA seryl-tRNA(sec) 99.7 3.6E-14 7.7E-19 128.7 24.5 284 5-326 127-453 (454)
353 PF00282 Pyridoxal_deC: Pyrido 99.7 1.3E-14 2.8E-19 129.1 21.1 245 2-262 85-369 (373)
354 TIGR00461 gcvP glycine dehydro 99.7 5.1E-14 1.1E-18 135.4 26.1 264 40-332 577-867 (939)
355 PRK08297 L-lysine aminotransfe 99.6 1.7E-13 3.6E-18 125.0 25.8 281 16-333 109-442 (443)
356 COG1982 LdcC Arginine/lysine/o 99.6 6.9E-14 1.5E-18 126.2 22.5 152 18-187 87-243 (557)
357 KOG1404 Alanine-glyoxylate ami 99.6 6.3E-13 1.4E-17 113.0 25.1 296 8-326 100-432 (442)
358 KOG1402 Ornithine aminotransfe 99.6 1.5E-13 3.2E-18 114.1 20.9 277 17-331 116-426 (427)
359 PRK06209 glutamate-1-semialdeh 99.6 1.6E-13 3.4E-18 125.0 23.0 273 17-332 104-405 (431)
360 COG3844 Kynureninase [Amino ac 99.6 2E-13 4.4E-18 113.3 20.7 283 2-333 78-403 (407)
361 TIGR00699 GABAtrns_euk 4-amino 99.6 1.4E-13 3E-18 125.2 21.3 280 16-330 121-464 (464)
362 PLN02414 glycine dehydrogenase 99.6 1.4E-13 3E-18 134.0 22.5 273 6-328 154-465 (993)
363 PLN02974 adenosylmethionine-8- 99.6 1.5E-12 3.2E-17 125.4 26.9 230 82-330 567-816 (817)
364 PLN02452 phosphoserine transam 99.6 4.6E-13 9.9E-18 118.6 21.6 265 20-333 74-364 (365)
365 KOG1401 Acetylornithine aminot 99.6 1.2E-12 2.5E-17 112.2 21.5 301 3-333 105-431 (433)
366 PRK05367 glycine dehydrogenase 99.6 8.8E-13 1.9E-17 129.0 23.6 271 7-327 128-437 (954)
367 TIGR03251 LAT_fam L-lysine 6-t 99.6 1.9E-12 4.1E-17 118.0 24.1 278 16-328 102-430 (431)
368 KOG1358 Serine palmitoyltransf 99.5 2.6E-13 5.7E-18 115.2 13.8 291 17-332 154-465 (467)
369 TIGR03811 tyr_de_CO2_Ent tyros 99.5 3.6E-12 7.7E-17 118.8 20.9 219 43-268 224-504 (608)
370 COG3033 TnaA Tryptophanase [Am 99.5 4.2E-11 9.1E-16 101.0 22.4 303 18-332 95-444 (471)
371 KOG1403 Predicted alanine-glyo 99.4 6.9E-11 1.5E-15 97.3 20.7 295 17-330 102-435 (452)
372 COG1003 GcvP Glycine cleavage 99.4 7.9E-11 1.7E-15 101.8 21.5 296 2-332 115-447 (496)
373 PRK12462 phosphoserine aminotr 99.4 5.2E-11 1.1E-15 104.5 20.5 266 19-333 69-363 (364)
374 PF00202 Aminotran_3: Aminotra 99.4 5.3E-12 1.2E-16 111.5 12.5 215 16-248 75-315 (339)
375 KOG0629 Glutamate decarboxylas 99.4 2.1E-10 4.6E-15 98.8 20.7 308 5-332 150-509 (510)
376 KOG2467 Glycine/serine hydroxy 99.3 1E-09 2.2E-14 92.9 21.4 285 13-330 99-424 (477)
377 PF05889 SLA_LP_auto_ag: Solub 99.3 1.5E-09 3.1E-14 94.3 21.9 296 17-331 74-389 (389)
378 PF06838 Met_gamma_lyase: Meth 99.2 5.2E-09 1.1E-13 89.3 20.2 217 25-268 80-319 (403)
379 COG1921 SelA Selenocysteine sy 99.2 2.2E-09 4.8E-14 93.2 17.8 179 16-220 82-268 (395)
380 KOG1383 Glutamate decarboxylas 99.2 8.6E-10 1.9E-14 96.3 14.6 279 21-333 142-447 (491)
381 TIGR00461 gcvP glycine dehydro 99.1 1.6E-08 3.6E-13 98.1 22.2 267 9-327 118-426 (939)
382 PF02347 GDC-P: Glycine cleava 99.1 7.8E-09 1.7E-13 92.0 15.9 261 15-326 125-429 (429)
383 KOG0628 Aromatic-L-amino-acid/ 99.0 1.4E-07 3E-12 82.7 21.1 268 43-332 184-471 (511)
384 KOG3846 L-kynurenine hydrolase 99.0 8.8E-08 1.9E-12 79.6 17.7 293 7-333 118-462 (465)
385 PF03841 SelA: L-seryl-tRNA se 98.9 1.6E-09 3.5E-14 93.3 5.5 213 16-249 61-296 (367)
386 COG0403 GcvP Glycine cleavage 98.9 1.1E-06 2.4E-11 76.6 21.5 271 13-330 133-448 (450)
387 KOG1405 4-aminobutyrate aminot 98.7 2.7E-06 5.9E-11 72.2 16.9 221 78-332 252-483 (484)
388 COG1932 SerC Phosphoserine ami 98.6 1.3E-05 2.9E-10 68.8 18.7 284 4-334 58-365 (365)
389 PLN02994 1-aminocyclopropane-1 98.6 9E-08 2E-12 73.8 5.1 53 1-53 101-153 (153)
390 PRK12566 glycine dehydrogenase 98.5 1.2E-05 2.5E-10 78.4 19.7 262 14-327 138-439 (954)
391 COG4100 Cystathionine beta-lya 98.5 7E-06 1.5E-10 68.3 14.4 151 25-198 91-257 (416)
392 KOG2040 Glycine dehydrogenase 98.3 7.5E-05 1.6E-09 68.6 17.0 256 43-329 632-915 (1001)
393 KOG3843 Predicted serine hydro 98.2 4.3E-05 9.3E-10 62.6 13.2 273 44-332 106-402 (432)
394 KOG2040 Glycine dehydrogenase 97.0 0.031 6.7E-07 52.1 14.6 265 13-327 176-478 (1001)
395 KOG2790 Phosphoserine aminotra 95.9 0.36 7.8E-06 40.7 12.7 281 4-334 60-370 (370)
396 PLN02672 methionine S-methyltr 92.8 1.7 3.6E-05 44.5 11.9 188 1-212 435-640 (1082)
397 COG2102 Predicted ATPases of P 91.1 7.4 0.00016 31.8 12.3 158 20-208 4-176 (223)
398 PRK05678 succinyl-CoA syntheta 85.5 4.4 9.6E-05 35.0 7.6 69 47-134 50-120 (291)
399 PF03652 UPF0081: Uncharacteri 82.6 5.1 0.00011 30.2 6.0 60 77-141 36-99 (135)
400 smart00642 Aamy Alpha-amylase 82.5 7.7 0.00017 30.5 7.2 58 80-139 17-92 (166)
401 PRK04296 thymidine kinase; Pro 82.0 25 0.00054 28.2 11.3 98 27-141 17-117 (190)
402 TIGR01019 sucCoAalpha succinyl 81.9 7.3 0.00016 33.6 7.4 71 45-134 46-118 (286)
403 PF05368 NmrA: NmrA-like famil 80.9 12 0.00027 30.9 8.4 93 24-135 6-99 (233)
404 COG2870 RfaE ADP-heptose synth 80.8 7.2 0.00016 35.0 6.9 88 44-141 94-182 (467)
405 TIGR00289 conserved hypothetic 77.5 40 0.00086 27.9 13.0 99 20-134 4-115 (222)
406 COG0352 ThiE Thiamine monophos 77.2 19 0.00041 29.5 8.0 100 81-200 24-123 (211)
407 COG1519 KdtA 3-deoxy-D-manno-o 76.1 33 0.00071 31.2 9.7 112 4-138 33-154 (419)
408 COG4221 Short-chain alcohol de 76.0 27 0.00057 29.3 8.5 98 18-124 6-110 (246)
409 COG1105 FruK Fructose-1-phosph 75.6 55 0.0012 28.6 11.2 60 76-138 108-167 (310)
410 PRK08265 short chain dehydroge 75.1 49 0.0011 27.8 11.2 99 19-123 7-107 (261)
411 TIGR00290 MJ0570_dom MJ0570-re 74.9 47 0.001 27.5 10.5 99 20-134 4-115 (223)
412 TIGR00623 sula cell division i 73.0 37 0.00081 26.6 8.2 104 19-134 34-142 (168)
413 TIGR02717 AcCoA-syn-alpha acet 73.0 16 0.00035 33.9 7.5 46 97-143 88-134 (447)
414 KOG1201 Hydroxysteroid 17-beta 72.9 62 0.0014 28.0 10.4 137 19-180 39-182 (300)
415 PRK00109 Holliday junction res 72.3 16 0.00035 27.6 6.2 58 79-141 41-101 (138)
416 cd02742 GH20_hexosaminidase Be 72.2 7.7 0.00017 33.8 5.0 63 61-134 27-89 (303)
417 KOG2741 Dimeric dihydrodiol de 71.8 11 0.00025 33.0 5.7 76 48-141 58-133 (351)
418 TIGR00250 RNAse_H_YqgF RNAse H 70.4 26 0.00056 26.2 6.8 58 79-141 35-95 (130)
419 PF02310 B12-binding: B12 bind 70.3 38 0.00083 24.5 7.9 63 61-139 26-90 (121)
420 cd01994 Alpha_ANH_like_IV This 70.1 56 0.0012 26.4 9.9 102 20-134 3-118 (194)
421 COG0816 Predicted endonuclease 69.5 22 0.00047 27.1 6.2 56 79-139 40-98 (141)
422 PTZ00187 succinyl-CoA syntheta 69.3 27 0.00059 30.6 7.6 69 47-134 73-144 (317)
423 PRK10595 SOS cell division inh 69.1 53 0.0012 25.7 10.1 86 37-134 52-138 (164)
424 PF13460 NAD_binding_10: NADH( 68.8 39 0.00084 26.5 8.1 83 26-131 8-90 (183)
425 COG1435 Tdk Thymidine kinase [ 68.4 62 0.0013 26.2 9.5 114 23-152 14-130 (201)
426 COG1184 GCD2 Translation initi 68.3 62 0.0013 28.1 9.4 102 16-135 118-226 (301)
427 PLN00125 Succinyl-CoA ligase [ 68.1 18 0.00039 31.5 6.3 72 44-134 51-125 (300)
428 cd06568 GH20_SpHex_like A subg 67.6 8.3 0.00018 34.1 4.2 64 61-134 29-92 (329)
429 PRK09441 cytoplasmic alpha-amy 65.4 21 0.00045 33.5 6.6 26 115-140 79-104 (479)
430 PF13380 CoA_binding_2: CoA bi 65.1 40 0.00086 24.6 6.8 89 31-139 17-111 (116)
431 PF09419 PGP_phosphatase: Mito 64.9 67 0.0015 25.3 9.1 99 29-135 3-111 (168)
432 cd06562 GH20_HexA_HexB-like Be 64.7 9.6 0.00021 34.0 4.1 59 61-134 29-87 (348)
433 cd06564 GH20_DspB_LnbB-like Gl 64.1 14 0.00029 32.7 4.9 26 109-134 74-99 (326)
434 PF13727 CoA_binding_3: CoA-bi 63.5 23 0.0005 27.5 5.8 44 80-134 129-172 (175)
435 COG0826 Collagenase and relate 63.1 23 0.0005 31.6 6.1 49 80-134 15-66 (347)
436 PRK10785 maltodextrin glucosid 62.7 32 0.0007 33.3 7.5 61 78-140 175-249 (598)
437 PF01408 GFO_IDH_MocA: Oxidore 62.7 35 0.00075 24.6 6.3 21 115-135 98-118 (120)
438 COG1587 HemD Uroporphyrinogen- 61.6 37 0.0008 28.6 7.0 95 20-130 102-198 (248)
439 KOG1467 Translation initiation 61.5 65 0.0014 29.8 8.5 104 16-136 358-467 (556)
440 PF00106 adh_short: short chai 61.0 72 0.0016 24.3 8.4 98 21-124 3-109 (167)
441 PRK12936 3-ketoacyl-(acyl-carr 61.0 92 0.002 25.6 10.8 84 19-108 7-91 (245)
442 PRK09189 uroporphyrinogen-III 60.2 43 0.00093 27.9 7.1 82 20-107 97-180 (240)
443 PF01902 ATP_bind_4: ATP-bindi 59.9 47 0.001 27.4 7.0 99 20-134 4-115 (218)
444 PRK02261 methylaspartate mutas 59.6 74 0.0016 24.0 7.6 53 61-129 29-81 (137)
445 PRK06483 dihydromonapterin red 59.5 98 0.0021 25.4 10.7 78 20-105 4-82 (236)
446 KOG1465 Translation initiation 59.5 77 0.0017 27.5 8.1 106 16-137 161-271 (353)
447 PRK13396 3-deoxy-7-phosphohept 59.4 28 0.0006 31.0 5.9 65 75-141 215-282 (352)
448 cd00950 DHDPS Dihydrodipicolin 58.7 66 0.0014 27.6 8.2 53 74-129 13-65 (284)
449 cd00951 KDGDH 5-dehydro-4-deox 58.7 69 0.0015 27.7 8.3 59 74-135 13-74 (289)
450 PF02571 CbiJ: Precorrin-6x re 58.5 53 0.0012 27.7 7.3 94 19-134 2-97 (249)
451 COG0296 GlgB 1,4-alpha-glucan 58.5 17 0.00036 35.1 4.6 31 114-144 211-241 (628)
452 TIGR00649 MG423 conserved hypo 58.1 1.2E+02 0.0025 27.9 10.1 96 18-131 287-401 (422)
453 COG2240 PdxK Pyridoxal/pyridox 58.0 1.2E+02 0.0025 26.2 9.1 14 163-176 172-185 (281)
454 PF04413 Glycos_transf_N: 3-De 57.8 79 0.0017 25.3 7.9 89 30-141 37-130 (186)
455 PRK08335 translation initiatio 57.0 1.2E+02 0.0026 26.1 9.1 102 17-135 109-216 (275)
456 cd06570 GH20_chitobiase-like_1 56.8 13 0.00029 32.5 3.5 24 111-134 62-85 (311)
457 cd06569 GH20_Sm-chitobiase-lik 56.8 19 0.00042 33.3 4.7 78 56-134 29-114 (445)
458 COG0074 SucD Succinyl-CoA synt 56.5 53 0.0011 28.1 6.7 75 41-134 44-120 (293)
459 KOG3974 Predicted sugar kinase 56.2 47 0.001 28.1 6.2 70 53-137 68-139 (306)
460 COG1088 RfbB dTDP-D-glucose 4, 56.1 62 0.0014 28.1 7.1 118 20-147 3-138 (340)
461 PF10087 DUF2325: Uncharacteri 56.1 67 0.0014 22.4 7.0 68 52-135 13-80 (97)
462 PRK08057 cobalt-precorrin-6x r 55.2 89 0.0019 26.4 8.1 92 18-134 3-96 (248)
463 PRK12313 glycogen branching en 55.1 37 0.00081 33.1 6.6 27 115-141 218-244 (633)
464 PF02662 FlpD: Methyl-viologen 55.1 43 0.00093 24.8 5.5 59 63-131 28-91 (124)
465 PRK06372 translation initiatio 55.1 1.3E+02 0.0028 25.5 9.6 100 18-135 87-190 (253)
466 PRK06463 fabG 3-ketoacyl-(acyl 55.0 1.2E+02 0.0027 25.2 10.4 81 19-107 8-89 (255)
467 cd06563 GH20_chitobiase-like T 55.0 18 0.00039 32.4 4.1 74 61-134 29-103 (357)
468 TIGR00715 precor6x_red precorr 54.5 65 0.0014 27.3 7.2 95 19-134 2-96 (256)
469 PRK15452 putative protease; Pr 53.7 40 0.00088 31.2 6.2 50 43-94 5-58 (443)
470 PF14871 GHL6: Hypothetical gl 53.6 53 0.0012 24.6 5.8 20 115-134 42-61 (132)
471 PF00728 Glyco_hydro_20: Glyco 53.5 9.8 0.00021 33.9 2.3 62 61-134 29-90 (351)
472 PF00265 TK: Thymidine kinase; 53.4 32 0.0007 27.3 4.9 121 25-171 13-138 (176)
473 cd03110 Fer4_NifH_child This p 52.8 1.1E+02 0.0023 24.0 8.0 85 39-134 91-175 (179)
474 PF00128 Alpha-amylase: Alpha 52.7 13 0.00029 32.0 2.9 26 115-140 50-75 (316)
475 PF08543 Phos_pyr_kin: Phospho 52.4 60 0.0013 27.2 6.7 52 79-138 43-94 (246)
476 PF04244 DPRP: Deoxyribodipyri 52.3 79 0.0017 26.2 7.2 62 61-134 60-121 (224)
477 cd00408 DHDPS-like Dihydrodipi 52.2 77 0.0017 27.1 7.5 58 74-134 10-70 (281)
478 PRK03170 dihydrodipicolinate s 52.2 98 0.0021 26.7 8.2 58 74-134 14-74 (292)
479 TIGR01515 branching_enzym alph 51.7 50 0.0011 32.1 6.8 27 115-141 204-230 (613)
480 PLN02522 ATP citrate (pro-S)-l 51.5 58 0.0013 31.5 7.0 74 48-138 63-138 (608)
481 PF14258 DUF4350: Domain of un 50.9 65 0.0014 20.7 5.8 33 100-136 37-70 (70)
482 PRK09505 malS alpha-amylase; R 50.8 62 0.0013 31.9 7.2 59 80-140 228-315 (683)
483 TIGR03679 arCOG00187 arCOG0018 50.7 1.4E+02 0.0031 24.6 10.1 102 20-134 1-116 (218)
484 PRK12481 2-deoxy-D-gluconate 3 50.5 1.5E+02 0.0032 24.7 9.6 81 18-104 8-90 (251)
485 cd02067 B12-binding B12 bindin 50.2 95 0.0021 22.4 7.6 53 61-129 25-77 (119)
486 TIGR01501 MthylAspMutase methy 50.2 1E+02 0.0022 23.3 6.8 58 57-131 24-81 (134)
487 cd02071 MM_CoA_mut_B12_BD meth 50.1 99 0.0022 22.6 7.2 59 61-135 25-86 (122)
488 PRK08176 pdxK pyridoxal-pyrido 50.0 1.4E+02 0.003 25.7 8.7 54 79-139 68-128 (281)
489 KOG0622 Ornithine decarboxylas 49.9 2E+02 0.0043 26.3 9.5 81 40-134 122-210 (448)
490 PF13407 Peripla_BP_4: Peripla 49.8 42 0.00091 27.9 5.5 59 61-135 26-85 (257)
491 TIGR02026 BchE magnesium-proto 49.8 99 0.0021 29.2 8.3 66 61-140 34-102 (497)
492 cd01455 vWA_F11C1-5a_type Von 49.6 76 0.0016 25.6 6.4 52 82-136 95-148 (191)
493 PRK05402 glycogen branching en 49.5 53 0.0012 32.7 6.8 30 113-142 311-340 (726)
494 TIGR03590 PseG pseudaminic aci 49.5 1.7E+02 0.0037 25.1 9.5 60 39-106 29-89 (279)
495 PRK13602 putative ribosomal pr 49.3 81 0.0017 21.3 6.0 45 80-136 15-59 (82)
496 PRK05854 short chain dehydroge 49.2 1.2E+02 0.0025 26.5 8.3 81 18-103 14-99 (313)
497 PRK03620 5-dehydro-4-deoxygluc 49.0 1.3E+02 0.0028 26.3 8.4 59 74-135 20-81 (303)
498 TIGR00683 nanA N-acetylneurami 49.0 1.3E+02 0.0028 26.1 8.3 60 74-135 13-75 (290)
499 PRK13397 3-deoxy-7-phosphohept 48.7 89 0.0019 26.4 7.0 62 75-141 129-195 (250)
500 COG0616 SppA Periplasmic serin 48.4 1.9E+02 0.0042 25.4 10.0 60 78-139 79-139 (317)
No 1
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-53 Score=378.20 Aligned_cols=312 Identities=27% Similarity=0.489 Sum_probs=278.4
Q ss_pred ChhhhhhhhcCCCCCCCCc-EEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCC-CCcc
Q 019899 1 MAGFMSQVLGQAVSFDPSQ-IVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRST-DNFA 78 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~~-i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~-~~~~ 78 (334)
||+++.++.+ +.+++++ |++|+|+++|+..++.+++++||+|++++|.|++|..... ..|.+++.+++..+ ++|.
T Consensus 74 ia~~~~~~~~--~~~~~~~eiivt~Ga~~al~~~~~a~~~pGDeVlip~P~Y~~y~~~~~-~~gg~~v~v~l~~~~~~f~ 150 (393)
T COG0436 74 IAEKYKRRYG--LDVDPEEEIIVTAGAKEALFLAFLALLNPGDEVLIPDPGYPSYEAAVK-LAGGKPVPVPLDEEENGFK 150 (393)
T ss_pred HHHHHHHHhC--CCCCCCCeEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHH-hcCCEEEEEeCCcCccCCc
Confidence 4788888777 7788876 9999999999999999999999999999999999999999 99999999998544 5999
Q ss_pred ccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhc
Q 019899 79 FSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEA 158 (334)
Q Consensus 79 ~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~ 158 (334)
+|++.+++++++ ++|++++++||||||.+++.+++++|.++|++|+++||.||+|..+.|++..+.++.++.+.
T Consensus 151 ~d~~~l~~~i~~------ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~ 224 (393)
T COG0436 151 PDLEDLEAAITP------KTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGA 224 (393)
T ss_pred CCHHHHHhhcCc------cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCC
Confidence 999999999997 89999999999999999999999999999999999999999999999988666777766541
Q ss_pred cccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc--cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHH
Q 019899 159 EEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--CSISAPTQRLLISMLSDTKFIQEYLETNKRRIK 236 (334)
Q Consensus 159 ~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 236 (334)
.++++.+.||||+++++|+|+||++++++++++.+.+.... .+.+.+.|.++..+++..+. .+..+.+++.++
T Consensus 225 ----~~~~i~i~s~SK~~~mtGwRvG~~v~~~~~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~-~~~~~~~~~~~~ 299 (393)
T COG0436 225 ----RDRTITINSFSKTYGMTGWRIGWVVGPPEELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQS-DEVVEEMREEYR 299 (393)
T ss_pred ----cceEEEEecccccccccccceeEeecChHHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccc-hHHHHHHHHHHH
Confidence 47899999999999999999999999558898888865444 47889999999999987643 345667778999
Q ss_pred HHHHHHHHHHHhC-CCcccC-CCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC-CCCeEEEEecC
Q 019899 237 KLYDSFVAGLKQL-GIRCSE-SSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI-EPGWFRCCFTS 313 (334)
Q Consensus 237 ~~~~~~~~~l~~~-g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~-~~~~iRi~~~~ 313 (334)
++++.+.+.|.+. |+.+.. |+++||+|++++.. .++.+++.+|+++.||.+.||..||.. ..+++|++++
T Consensus 300 ~rrd~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i~~~------~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~- 372 (393)
T COG0436 300 ERRDLLVEALNEIGGLSVVKPPEGAFYLFPKIPEL------LDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLA- 372 (393)
T ss_pred HHHHHHHHHHHhcCCeeeccCCCeeEEEEeecCCC------CCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEe-
Confidence 9999999999988 599887 88999999999986 356899999999999999999999985 7799999999
Q ss_pred CCcccHHHHHHHHHHHHHHc
Q 019899 314 LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 314 ~~~~~l~~~l~~l~~~~~~~ 333 (334)
.+++.++++++++.++++++
T Consensus 373 ~~~~~l~~a~~rl~~~~~~~ 392 (393)
T COG0436 373 TSEETLEEALRRLARFLAEY 392 (393)
T ss_pred cCHHHHHHHHHHHHHHHHhc
Confidence 65699999999999998875
No 2
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-52 Score=352.69 Aligned_cols=331 Identities=53% Similarity=0.993 Sum_probs=314.4
Q ss_pred ChhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcccc
Q 019899 1 MAGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
+|+|+.+..+.....+|+++++++|+|.++.+++.+|.+|||..++|.|.|+++.+-+++..|.++++|.+..+++++++
T Consensus 130 ~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgveivpv~c~Ss~~f~it 209 (471)
T KOG0256|consen 130 VAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGVEIVPVHCSSSNGFQIT 209 (471)
T ss_pred HHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCceEEEEEeecCCCcccc
Confidence 47888888888899999999999999999999999999999999999999999999999889999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++|.+++++++.+.+++.++++||+||-|.+++.+++..+++++.++++.||+||+|+..+|+...+.++.++...++
T Consensus 210 v~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~ 289 (471)
T KOG0256|consen 210 VEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPH 289 (471)
T ss_pred HHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCccCceEHHHHhhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999889999999988766
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYD 240 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (334)
++.+++-++.|+||-+|+||+|+|.|...++.+.....++..++..|+..|..++.+|.+.++.+.++.+.+.+++.+..
T Consensus 290 ~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kmssf~~vSs~tQ~~la~LLSD~~f~~~yl~en~~Rl~~rh~ 369 (471)
T KOG0256|consen 290 LDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSSFGLVSSQTQYLLASLLSDEEFTREYLRENNKRLRIRHR 369 (471)
T ss_pred cCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHhhccCCcHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999988889999999999999999
Q ss_pred HHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHH
Q 019899 241 SFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIP 320 (334)
Q Consensus 241 ~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~ 320 (334)
++.+.|+++|+.+....+|+|+|+++.+.....+.+...++..+++.+-++.+.||+.|.+.+++|+|+|+++..++.++
T Consensus 370 ~~~~gLk~lgI~cl~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcFAn~~~~t~~ 449 (471)
T KOG0256|consen 370 YIVEGLKALGIPCLKSNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSPGSSCHCHEPGWFRVCFANMSEETLE 449 (471)
T ss_pred HHHhhHHhcCCceeecCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCCCCcceecCCCeEEEEeccCCHHHHH
Confidence 99999999999999999999999999999888777777889999899779999999999999999999999977777777
Q ss_pred HHHHHHHHHHH
Q 019899 321 LVIERIQKVAE 331 (334)
Q Consensus 321 ~~l~~l~~~~~ 331 (334)
.++++++.++.
T Consensus 450 ~am~Ri~~~~~ 460 (471)
T KOG0256|consen 450 VAMRRLKQFLD 460 (471)
T ss_pred HHHHHHHHHHH
Confidence 79999999875
No 3
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=2.4e-52 Score=379.14 Aligned_cols=334 Identities=51% Similarity=0.997 Sum_probs=288.3
Q ss_pred ChhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcccc
Q 019899 1 MAGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
+|+|+.+.++...++++++|++|+|+++++..++.+++++||.|+++.|.|+.+...+....|.++++|+++.++++.+|
T Consensus 104 iA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~ 183 (447)
T PLN02607 104 MASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVT 183 (447)
T ss_pred HHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCC
Confidence 46777776664456899999999999999999999999999999999999999988776457999999998766778899
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++.+++++++.++.+.++|++++++|+||||.++|.+++++++++|++|++++|+||+|+.+.|++..+.++.++....+
T Consensus 184 ~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~ 263 (447)
T PLN02607 184 PQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARG 263 (447)
T ss_pred HHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcC
Confidence 99999999988777889999999999999999999999999999999999999999999999887666777766543211
Q ss_pred -cC-CCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 161 -VD-KDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 161 -~~-~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
.+ .++++++.|+||.+|++|+|+||+++.++.+++.++....+...|+++|.++..++.+.++.+.++.+.+++++++
T Consensus 264 ~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~~~~~~~~~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~ 343 (447)
T PLN02607 264 YKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLVSSQTQHLLASMLSDEEFTENYIRTNRERLRKR 343 (447)
T ss_pred CCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHH
Confidence 11 5789999999999999999999999877888888877666656789999999999998887778888999999999
Q ss_pred HHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCccc
Q 019899 239 YDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHED 318 (334)
Q Consensus 239 ~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~ 318 (334)
++.+.+.|++.|+++..+.+|+|+|+++++...........++..++++++||.+.||..|+...++|+|++++..++++
T Consensus 344 ~~~~~~~L~~~gi~~~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~~~~~~ 423 (447)
T PLN02607 344 YEMIVQGLRRAGIECLKGNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFANMSEDT 423 (447)
T ss_pred HHHHHHHHHhCCCCcccCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEeccCCHHH
Confidence 99999999999999889999999999998654322223345778888888999999999998877899999999658999
Q ss_pred HHHHHHHHHHHHHHcC
Q 019899 319 IPLVIERIQKVAETCK 334 (334)
Q Consensus 319 l~~~l~~l~~~~~~~~ 334 (334)
+++++++|.+++++++
T Consensus 424 l~~gl~Ri~~~l~~~~ 439 (447)
T PLN02607 424 LEVALKRIHRFMDRRK 439 (447)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999997753
No 4
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1e-51 Score=378.85 Aligned_cols=333 Identities=44% Similarity=0.878 Sum_probs=284.2
Q ss_pred ChhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcccc
Q 019899 1 MAGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
||+|+.+.++..+.+++++|++|+|+++++..++.+++++||.|++++|+|+.+...+....|++++.+++..+++++++
T Consensus 103 iA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~ 182 (496)
T PLN02376 103 IAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLT 182 (496)
T ss_pred HHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCC
Confidence 46777776665566899999999999999999999999999999999999999998776348999999999766778999
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++.++++++.....+.+++++++++|+||||.++|.+++++|+++|++++++||+||+|+.+.|.+..+.++.++..+.+
T Consensus 183 ~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~ 262 (496)
T PLN02376 183 VDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVD 262 (496)
T ss_pred HHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhcccc
Confidence 99999887655444457899999999999999999999999999999999999999999999988766777777643211
Q ss_pred ---cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 161 ---VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 161 ---~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
.+.++++++.||||.+|++|+|+||++++++.+.+.++.....+..+++.|.++..++.+.++++.++.+.++++++
T Consensus 263 ~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~~~~~~~vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~ 342 (496)
T PLN02376 263 ISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARKMSSFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGI 342 (496)
T ss_pred ccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCChhHHHHHHHHHHHHHHH
Confidence 11246778899999999999999999997788888777766666789999999999999888778888999999999
Q ss_pred HHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCC-CChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCc
Q 019899 238 LYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPS-YSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTH 316 (334)
Q Consensus 238 ~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~ 316 (334)
+++.+.+.|++.|+++..+++|+|+|+++++.... ...+...++++.++++.||.+.||..|+...++|+|++++..++
T Consensus 343 r~~~l~~~L~~~gi~~~~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~~~~ 422 (496)
T PLN02376 343 RHKVFTTGIKKADIACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFANMDD 422 (496)
T ss_pred HHHHHHHHHHHCCCcccCCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeCCCH
Confidence 99999999999999988899999999999865432 22234467888888888999999999987678999999996678
Q ss_pred ccHHHHHHHHHHHHHHc
Q 019899 317 EDIPLVIERIQKVAETC 333 (334)
Q Consensus 317 ~~l~~~l~~l~~~~~~~ 333 (334)
+.++.++++|++++.++
T Consensus 423 ~~l~~al~rl~~~l~~~ 439 (496)
T PLN02376 423 DTLHVALGRIQDFVSKN 439 (496)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999998653
No 5
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1.5e-51 Score=376.73 Aligned_cols=332 Identities=50% Similarity=0.970 Sum_probs=281.2
Q ss_pred ChhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcccc
Q 019899 1 MAGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
||+|+.++++....+++++|++|+|+++++..++.+++++||.|++++|+|+.+...+....|.+++.+++..++++.+|
T Consensus 95 iA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~ 174 (468)
T PLN02450 95 LAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQIT 174 (468)
T ss_pred HHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCC
Confidence 46777776664455789999999999999999999999999999999999999988776348999999998766788899
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhc--
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEA-- 158 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~-- 158 (334)
++.+++++++..+.+.+++++++++|+||||.++|.+++++|+++|++|+++||+||+|+.+.|.+..+.+..+...+
T Consensus 175 ~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~ 254 (468)
T PLN02450 175 ESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRK 254 (468)
T ss_pred HHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcc
Confidence 999999998765566689999999999999999999999999999999999999999999988876555554444311
Q ss_pred -ccc-CCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHH
Q 019899 159 -EEV-DKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIK 236 (334)
Q Consensus 159 -~~~-~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 236 (334)
.+. +.++++++.||||.+|++|+|+||++++++.+.+.+.+.......+.++|.++..++.+.++..+++.+++++++
T Consensus 255 ~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~ 334 (468)
T PLN02450 255 LENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKMSSFGLVSSQTQYLLSALLSDKKFTKNYLEENQKRLK 334 (468)
T ss_pred cccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHH
Confidence 000 257899999999999999999999999666677777666555567999999999999987765667888899999
Q ss_pred HHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCc
Q 019899 237 KLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTH 316 (334)
Q Consensus 237 ~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~ 316 (334)
++++.+.+.|+++|+.+..+.+|+|+|+++++...........++...+++++||.+.||..|+...++++|++++..++
T Consensus 335 ~rr~~l~~~L~~~gi~~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~~~~ 414 (468)
T PLN02450 335 QRQKKLVSGLEAAGIKCLKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFANMSE 414 (468)
T ss_pred HHHHHHHHHHHHcCCcccCCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecCCCH
Confidence 99999999999999988889999999999986544333334456888888889999999999987667899999996688
Q ss_pred ccHHHHHHHHHHHHHH
Q 019899 317 EDIPLVIERIQKVAET 332 (334)
Q Consensus 317 ~~l~~~l~~l~~~~~~ 332 (334)
+++++++++|++++++
T Consensus 415 ~~l~~~l~ri~~~l~~ 430 (468)
T PLN02450 415 ETLDLAMKRLKSFVES 430 (468)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998865
No 6
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.7e-49 Score=354.61 Aligned_cols=304 Identities=22% Similarity=0.385 Sum_probs=264.2
Q ss_pred ChhhhhhhhcCCCCCCC-CcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccc
Q 019899 1 MAGFMSQVLGQAVSFDP-SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~-~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~ 79 (334)
||+|+.++.+ +.+++ ++|++|+|+++++..++.+++++||.|++++|+|+.+...++ ..|.+++.+|+++++++.+
T Consensus 78 ia~~~~~~~g--~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~-~~G~~~~~v~~~~~~~~~~ 154 (399)
T PRK07681 78 VTEYYNNTHN--VILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQ-MAGATSYYMPLKKENDFLP 154 (399)
T ss_pred HHHHHHHHhC--CCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHHHHH-hcCCEEEEEecCCCCCCcC
Confidence 3566666555 67888 799999999999999999999999999999999999999998 9999999999976667889
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
|++++++++++ +++++++++|+||||.+++.+++++|+++|++++++||+||+|+++.+++....++.++..
T Consensus 155 d~~~l~~~~~~------~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~-- 226 (399)
T PRK07681 155 DLELIPEEIAD------KAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPG-- 226 (399)
T ss_pred CHHHHHHhccc------cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCC--
Confidence 99999998865 7899999999999999999999999999999999999999999999887655556655543
Q ss_pred ccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 160 EVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
..+++++++||||.+|++|+|+||+++ ++++++.+..... .++.+.+.|.++..++.... +++.+.++.+++
T Consensus 227 --~~~~~i~~~S~SK~~~~~GlRiG~~i~-~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~---~~~~~~~~~~~~ 300 (399)
T PRK07681 227 --AKEVGVEINSLSKSYSLAGSRIGYMIG-NEEIVRALTQFKSNTDYGVFLPIQKAACAALRNGA---AFCEKNRGIYQE 300 (399)
T ss_pred --CcccEEEEeecccccCCccceeEEEec-CHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcH---HHHHHHHHHHHH
Confidence 146789999999999999999999998 8899998887653 46788899999999997742 456777888999
Q ss_pred HHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcc
Q 019899 238 LYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHE 317 (334)
Q Consensus 238 ~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~ 317 (334)
+++.+.+.|++.|+++..+.+|+|+|++++... ++.++...+++++||.+.||..|+...++++|++++ .+++
T Consensus 301 ~~~~l~~~L~~~g~~~~~p~~g~f~~~~l~~~~------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~-~~~~ 373 (399)
T PRK07681 301 RRDTLVDGFRTFGWNVDKPAGSMFVWAEIPKGW------TSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALV-QDEE 373 (399)
T ss_pred HHHHHHHHHHHCCCcccCCCeeeEEEEECCCCC------CHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEec-CCHH
Confidence 999999999999988878899999999998643 346888998887999999999987655689999998 6789
Q ss_pred cHHHHHHHHHH
Q 019899 318 DIPLVIERIQK 328 (334)
Q Consensus 318 ~l~~~l~~l~~ 328 (334)
++++++++|++
T Consensus 374 ~~~~~l~~l~~ 384 (399)
T PRK07681 374 VLQQAVENIRN 384 (399)
T ss_pred HHHHHHHHHHH
Confidence 99999999987
No 7
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.8e-48 Score=351.24 Aligned_cols=319 Identities=21% Similarity=0.345 Sum_probs=267.0
Q ss_pred ChhhhhhhhcCCCCCCCC-cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccc
Q 019899 1 MAGFMSQVLGQAVSFDPS-QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~-~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~ 79 (334)
+|+|+.+..+ +.++++ +|++|+|+++++..++.+++++||.|++++|+|+.+...++ ..|.+++.++++.++++.+
T Consensus 80 ia~~l~~~~~--~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~ 156 (403)
T PRK08636 80 ICNWYKRKYN--VDLDPETEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFI-LAGGNVHKMPLEYNEDFEL 156 (403)
T ss_pred HHHHHHHHhC--CCCCCCCeEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHH-hcCCEEEEEeccccccCcc
Confidence 4677776656 677887 79999999999999999999999999999999999999998 8999999999854566889
Q ss_pred cHHHHHHHHHHHHHc-CCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhc
Q 019899 80 SITALDQAFNQARKR-GVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEA 158 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~-~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~ 158 (334)
|++++.+.+++.-++ ..+++++++++|+||||.++|.+++++|+++|++|+++||+||+|+++.|++....++..+..
T Consensus 157 d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~- 235 (403)
T PRK08636 157 DEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEG- 235 (403)
T ss_pred ChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCC-
Confidence 998776665543322 347899999999999999999999999999999999999999999999887655556555532
Q ss_pred cccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHH
Q 019899 159 EEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDTKFIQEYLETNKRRIK 236 (334)
Q Consensus 159 ~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 236 (334)
..+.+++++||||.+|++|+|+||+++ ++++++.+.+... .++.+++.|.++..++... .+++.+.++.++
T Consensus 236 ---~~~~~i~~~S~SK~~~~~GlRiG~iv~-~~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~---~~~~~~~~~~~~ 308 (403)
T PRK08636 236 ---AKDVAVESYTLSKSYNMAGWRVGFVVG-NKKLVGALKKIKSWLDYGMFTPIQVAATIALDGD---QSCVEEIRETYR 308 (403)
T ss_pred ---ccccEEEEEecccccCCccceeeeeeC-CHHHHHHHHHHHHHhcccCChHHHHHHHHHHhCc---HHHHHHHHHHHH
Confidence 135778899999999999999999998 8889888877654 3566778888777666432 456788889999
Q ss_pred HHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCc
Q 019899 237 KLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTH 316 (334)
Q Consensus 237 ~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~ 316 (334)
++++.+.+.|++.++.+..+.+|+|+|+++|..... .++.+++..+++++||.+.||..|+...++++||+++ .++
T Consensus 309 ~~~~~l~~~L~~~~~~~~~p~~g~~~~~~l~~~~~~---~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~-~~~ 384 (403)
T PRK08636 309 KRRDVLIESFANAGWELQKPRASMFVWAKIPEPARH---LGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALI-ENE 384 (403)
T ss_pred HHHHHHHHHHHHCCCcccCCCcceEEEEECCCccCC---CCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEec-CCH
Confidence 999999999999888888899999999999864321 1346788888888999999999998666789999998 789
Q ss_pred ccHHHHHHHHHHHHHHcC
Q 019899 317 EDIPLVIERIQKVAETCK 334 (334)
Q Consensus 317 ~~l~~~l~~l~~~~~~~~ 334 (334)
+++++++++|++++++|+
T Consensus 385 ~~l~~~~~rl~~~l~~~~ 402 (403)
T PRK08636 385 NRIRQAARNIKKFLKELE 402 (403)
T ss_pred HHHHHHHHHHHHHHHhhc
Confidence 999999999999998864
No 8
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-48 Score=325.77 Aligned_cols=314 Identities=23% Similarity=0.384 Sum_probs=283.0
Q ss_pred ChhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCC-CCCCccc
Q 019899 1 MAGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCR-STDNFAF 79 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~-~~~~~~~ 79 (334)
|++|.+++.. +.++++.|++++|...++..+++.+.++||.|++.+|.|+++....+ ..|.++++.|+. +++.|.+
T Consensus 69 i~~w~~~r~~--~~i~~e~i~~~p~VVpgi~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~-~n~R~~i~~pL~~~~~~y~i 145 (388)
T COG1168 69 IAHWFKQRHQ--WEIKPEWIVFVPGVVPGISLAIRALTKPGDGVVIQTPVYPPFYNAIK-LNGRKVIENPLVEDDGRYEI 145 (388)
T ss_pred HHHHHHHhcC--CCCCcceEEEcCcchHhHHHHHHHhCcCCCeeEecCCCchHHHHHHh-hcCcEEEeccccccCCcEEe
Confidence 4678888887 88899999999999999999999999999999999999999999999 999999999986 5677889
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
|.++|++++.+. +++++++|||+||||.+++.++|.+|.++|.+||++||+||+|+++.+.|..+.++..+.+.
T Consensus 146 D~~~LE~~~~~~-----~vkl~iLCnPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~- 219 (388)
T COG1168 146 DFDALEKAFVDE-----RVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSER- 219 (388)
T ss_pred cHHHHHHHHhcC-----CccEEEEeCCCCCCCccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChh-
Confidence 999999999983 78999999999999999999999999999999999999999999999999888888877662
Q ss_pred ccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHH-hh--cccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHH
Q 019899 160 EVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKK-LT--RFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIK 236 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 236 (334)
. .++.+.+.|.||+|+++|+.+++++++++++++++.+ +. ...+.|.++..+...+++.+ ++|+.++.+.++
T Consensus 220 -~-a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G---~~WLd~L~~yl~ 294 (388)
T COG1168 220 -F-ADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKRLKRNGLHGPSALGIIATEAAYNQG---EPWLDELLEYLK 294 (388)
T ss_pred -h-hcceEEEeeccccccchhhhheeEEecCHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhc---hHHHHHHHHHHH
Confidence 1 5888999999999999999999999999998776643 33 33567889999998888876 678899999999
Q ss_pred HHHHHHHHHHHhC--CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCC
Q 019899 237 KLYDSFVAGLKQL--GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSL 314 (334)
Q Consensus 237 ~~~~~~~~~l~~~--g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~ 314 (334)
.+++++.+.+.+. ++++..|++.|.+|+++.+..- ++.++...++++.+|.+.+|..||..+.+++|++++ .
T Consensus 295 ~N~~~~~~~l~~~~P~v~v~~p~gTYL~WLD~r~l~l-----~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~a-c 368 (388)
T COG1168 295 DNRDYVADFLNKHLPGVKVTEPQGTYLAWLDCRELGL-----DDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFA-C 368 (388)
T ss_pred HHHHHHHHHHHhhCCCcEEecCCCceeeeeeccccCC-----ChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecC-C
Confidence 9999999999987 8999999999999999987643 346899999999999999999999998999999999 8
Q ss_pred CcccHHHHHHHHHHHHHHcC
Q 019899 315 THEDIPLVIERIQKVAETCK 334 (334)
Q Consensus 315 ~~~~l~~~l~~l~~~~~~~~ 334 (334)
+.+-+++++++|+.++++.+
T Consensus 369 pr~~L~eal~ri~~al~~~~ 388 (388)
T COG1168 369 PRAILEEALERLKRALKKRR 388 (388)
T ss_pred CHHHHHHHHHHHHHHHhccC
Confidence 89999999999999988653
No 9
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.8e-48 Score=348.29 Aligned_cols=311 Identities=22% Similarity=0.369 Sum_probs=261.2
Q ss_pred ChhhhhhhhcCCCCCCC-CcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCC---CCCC
Q 019899 1 MAGFMSQVLGQAVSFDP-SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCR---STDN 76 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~-~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~---~~~~ 76 (334)
|++|+.+.++ +.+++ ++|++|+|+++++..++.+++++||+|++++|+|+.+...++ ..|.+++.++++ .+++
T Consensus 87 ia~~l~~~~g--~~~~~~~~I~it~Ga~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~-~~g~~v~~v~~~~~~~~~~ 163 (405)
T PRK06207 87 LAARLAAFTG--APVDAADELIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVE-FFEGEMVPVQLDYLSADKR 163 (405)
T ss_pred HHHHHHHHhC--CCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHH-HcCCEEEEEeccccCcccC
Confidence 3567776656 66787 899999999999999999999999999999999999999998 899999999974 2346
Q ss_pred ccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhh
Q 019899 77 FAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEIL 156 (334)
Q Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~ 156 (334)
+.+|++++++++++ +++++++++|+||||.+++.+++++|+++|++++++||+||+|.++.|.+..+.++..+.
T Consensus 164 ~~~d~~~l~~~~~~------~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~ 237 (405)
T PRK06207 164 AGLDLDQLEEAFKA------GVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALP 237 (405)
T ss_pred CCcCHHHHHHhhhh------cCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCC
Confidence 88999999999876 788999999999999999999999999999999999999999999998765444444432
Q ss_pred hccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc--cCCChHHHHHHHHhhCChHHHHHHHHHHHHH
Q 019899 157 EAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--CSISAPTQRLLISMLSDTKFIQEYLETNKRR 234 (334)
Q Consensus 157 ~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 234 (334)
. +.+++++++||||.++++|+|+||+++ ++++++.+...... .+.+.+.|.++..++.... .++.+..++
T Consensus 238 ~----~~~~vi~i~SfSK~~~lpGlRiG~ii~-~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~---~~~~~~~~~ 309 (405)
T PRK06207 238 I----DPENVITIMGPSKTESLSGYRLGVAFG-SPAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSEPD---GWMKDRIAR 309 (405)
T ss_pred C----CcCcEEEEecchhhccCcccceEEEEc-CHHHHHHHHHHHhHhccCCCHHHHHHHHHHHhCcH---HHHHHHHHH
Confidence 1 267899999999999999999999998 88898988876554 3467788999999987532 233445566
Q ss_pred HHHHHHHHHHHHHhC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC
Q 019899 235 IKKLYDSFVAGLKQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS 313 (334)
Q Consensus 235 ~~~~~~~~~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~ 313 (334)
+.++++.+.+.|++. ++++..|++|+|+|++++... .++.++...|++++||.+.||..|+...++++|++++
T Consensus 310 ~~~~r~~l~~~L~~~~~~~~~~p~gg~fl~~~l~~~~-----~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~- 383 (405)
T PRK06207 310 HQAIRDDLLRVLRGVEGVFVRAPQAGSYLFPRLPRLA-----VSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFS- 383 (405)
T ss_pred HHHHHHHHHHHHhcCCCceecCCCeeEEEEEeCcccC-----CCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEec-
Confidence 777888899999877 788888899999999998531 1346788887777999999999997656789999999
Q ss_pred CCcccHHHHHHHHHHHHHHcC
Q 019899 314 LTHEDIPLVIERIQKVAETCK 334 (334)
Q Consensus 314 ~~~~~l~~~l~~l~~~~~~~~ 334 (334)
.+++++++++++|++++++++
T Consensus 384 ~~~~~l~~al~rl~~~l~~~~ 404 (405)
T PRK06207 384 QDHAAAVAAAERIAQLIERYR 404 (405)
T ss_pred CCHHHHHHHHHHHHHHHHHhh
Confidence 578999999999999998764
No 10
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=3.4e-48 Score=349.48 Aligned_cols=307 Identities=19% Similarity=0.350 Sum_probs=254.4
Q ss_pred ChhhhhhhhcCCCCCCCC-cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccc
Q 019899 1 MAGFMSQVLGQAVSFDPS-QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~-~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~ 79 (334)
||+|+.+..+ ++++++ +|++|+|+++++..++.+++++||+|++++|+|+.+...++ ..|.+++.+|+.+++++.+
T Consensus 77 ia~~~~~~~g--~~~~~~~~I~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~ 153 (388)
T PRK07366 77 AAQWYEQRFG--LAVDPETEVLPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAGGVY-LAGGQIYPMPLRAENDFLP 153 (388)
T ss_pred HHHHHHHhhC--CcCCCcCeEEECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHH-hcCCEEEEEECCCccCCCC
Confidence 3556655545 678898 69999999999999999999999999999999999999998 8999999999976667888
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCC-cchhhhhhhc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEE-FVSMAEILEA 158 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~-~~~~~~~~~~ 158 (334)
|++++++.+.+ +++++++++|+||||.+++.+++++|+++|++|+++||+||+|.++.|++.. ..++..+..
T Consensus 154 d~~~l~~~~~~------~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~- 226 (388)
T PRK07366 154 VFADIPTEVLA------QARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADP- 226 (388)
T ss_pred CHHHHHHhhcc------cceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCC-
Confidence 99999887765 6899999999999999999999999999999999999999999999886543 445555443
Q ss_pred cccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCC--h-HHHHHHHHhhCChHHHHHHHHHHHHHH
Q 019899 159 EEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSIS--A-PTQRLLISMLSDTKFIQEYLETNKRRI 235 (334)
Q Consensus 159 ~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~l~~~~~~~~~~~~~~~~~ 235 (334)
..+++++++||||.+|++|+|+||+++ ++++++.+.+....+..+ + ..+.+++.+... ++++++.++.+
T Consensus 227 ---~~~~vi~~~SfSK~~g~~GlRiG~~v~-~~~li~~l~~~~~~~~~~~~~~~~~~a~~~l~~~----~~~l~~~~~~~ 298 (388)
T PRK07366 227 ---EKSVSIEFFTLSKSYNMGGFRIGFAIG-NAQLIQALRQVKAVVDFNQYRGILNGAIAALTGP----QATVQQTVQIF 298 (388)
T ss_pred ---CcccEEEEeecccccCCcchhheehcC-CHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCc----HHHHHHHHHHH
Confidence 135789999999999999999999998 889999998776554332 2 234444443322 45678888999
Q ss_pred HHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCC
Q 019899 236 KKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLT 315 (334)
Q Consensus 236 ~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~ 315 (334)
+++++.+.+.|+++++.+..|.+|+|+|+++|..... ++.+++..+++++||.+.||..|+...++++|++++ .+
T Consensus 299 ~~~r~~l~~~L~~~~~~~~~p~~g~f~~~~~~~~~~~----~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~-~~ 373 (388)
T PRK07366 299 RQRRDAFINALHQIGWPVPLPEATMYVWAKLPEPWQG----NSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALV-HD 373 (388)
T ss_pred HHHHHHHHHHHHHCCCcccCCCeeEEEEEECCcccCC----CHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEec-CC
Confidence 9999999999999888877889999999999864321 245788887888999999999997655689999998 67
Q ss_pred cccHHHHHHHHHHHH
Q 019899 316 HEDIPLVIERIQKVA 330 (334)
Q Consensus 316 ~~~l~~~l~~l~~~~ 330 (334)
++++++++++|++++
T Consensus 374 ~~~l~~~l~rl~~~l 388 (388)
T PRK07366 374 PDILEEAVERIAAFL 388 (388)
T ss_pred HHHHHHHHHHHHHhC
Confidence 899999999998753
No 11
>PLN02187 rooty/superroot1
Probab=100.00 E-value=1e-47 Score=350.87 Aligned_cols=313 Identities=22% Similarity=0.385 Sum_probs=259.3
Q ss_pred ChhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcccc
Q 019899 1 MAGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
+|+|+.+..+ +++++++|++|+|+++++..++.+++++||+|++++|+|+.|...+. ..|.+++.+++.+++++.+|
T Consensus 117 iA~~~~~~~~--~~~~~~~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~-~~g~~~~~~~l~~~~~~~~d 193 (462)
T PLN02187 117 VADYMNRDLP--HKLTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYDARAA-YSGLEVRKFDLLPEKEWEID 193 (462)
T ss_pred HHHHHHHhcC--CCCCcccEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHH-HcCCEEEEEeCccccCCccC
Confidence 4667766555 67899999999999999999999999999999999999999988888 89999999998666789999
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++ +++++++++|+||||.+++.+++++|+++|++||++||+||+|.++.|++..+.++..+..
T Consensus 194 ~~~l~~~~~~------~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~--- 264 (462)
T PLN02187 194 LEGIEAIADE------NTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFAS--- 264 (462)
T ss_pred HHHHHHhcCC------CcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhcc---
Confidence 9999988865 7889999999999999999999999999999999999999999999987655556665543
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHH----HHHHHHHhhccc----CCChHHHHHHHHhhCChHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNES----VLAAAKKLTRFC----SISAPTQRLLISMLSDTKFIQEYLETNK 232 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~----~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 232 (334)
..++++++||||.++++|+|+||+++++++ +.+.+......+ +.+.+.|.++..++.... .+++.+.+
T Consensus 265 --~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~--~~~l~~~~ 340 (462)
T PLN02187 265 --IVPVLTLAGISKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKAD--KNFFAKKN 340 (462)
T ss_pred --CCcEEEEecchhhcCCccceeEEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCc--HHHHHHHH
Confidence 356999999999999999999999985443 234555444433 347899999999986522 46778889
Q ss_pred HHHHHHHHHHHHHHHhCCCc--ccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEE
Q 019899 233 RRIKKLYDSFVAGLKQLGIR--CSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCC 310 (334)
Q Consensus 233 ~~~~~~~~~~~~~l~~~g~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~ 310 (334)
+.++++++.+.+.|++.+.. +..|.+++|+|++++...... ..++.+++..+++++||.+.||..|+. ++++||+
T Consensus 341 ~~l~~~r~~l~~~L~~~~~~~~~~~P~gg~fl~~~l~~~~~~~-~~~~~~~~~~ll~~~gV~v~pG~~fg~--~~~iRis 417 (462)
T PLN02187 341 KILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSLMDN-IKDDIDFCVKLAREENLVFLPGDALGL--KNWMRIT 417 (462)
T ss_pred HHHHHHHHHHHHHHhhCCCCcCCCCCCEeEEEEeecChhhCCC-CCCHHHHHHHHHhhCCEEEECccccCC--CCeEEEE
Confidence 99999999999999987533 236788999999886421100 113457788888889999999999974 7899999
Q ss_pred ecCCCcccHHHHHHHHHHHHHHc
Q 019899 311 FTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 311 ~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
++ ..++++++++++|.+++++|
T Consensus 418 ~~-~~~e~l~~al~rL~~~l~~~ 439 (462)
T PLN02187 418 IG-VEAHMLEDALERLKGFCTRH 439 (462)
T ss_pred eC-CCHHHHHHHHHHHHHHHHHh
Confidence 99 67889999999999999876
No 12
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=2.9e-47 Score=344.53 Aligned_cols=308 Identities=23% Similarity=0.406 Sum_probs=262.9
Q ss_pred ChhhhhhhhcCCCCCCCC-cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccc
Q 019899 1 MAGFMSQVLGQAVSFDPS-QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~-~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~ 79 (334)
+++|+.+..+ +.++++ +|++|+|+++++..++.+++++||+|++++|+|+.+...++ ..|.+++.+++.++ ++.+
T Consensus 100 ia~~~~~~~g--~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~-~~g~~~~~v~~~~~-~~~~ 175 (413)
T PLN00175 100 IAERFKKDTG--LVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLS-MAGAKIKTVTLRPP-DFAV 175 (413)
T ss_pred HHHHHHHHhC--CCCCCCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHH-HcCCEEEEEECCcc-cCCC
Confidence 3566666655 667887 79999999999999999999999999999999999999998 89999999998543 4789
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
|++++++.+++ +++++++++|+||||.++|.+++++|+++|++|+++||+||+|..+.|++. +.++.++.+.
T Consensus 176 ~~~~l~~~~~~------~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~-~~s~~~~~~~- 247 (413)
T PLN00175 176 PEDELKAAFTS------KTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGD-HISMASLPGM- 247 (413)
T ss_pred CHHHHHHhcCc------CceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCc-ccChhhCCCC-
Confidence 99999999875 789999999999999999999999999999999999999999999988653 3455554321
Q ss_pred ccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 160 EVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
.+++++++||||.++++|+|+||+++ ++++.+.+..... .++.+.+.|.++..++... +.++.+.++.+++
T Consensus 248 ---~~~vi~i~SfSK~~~~~G~RiG~~v~-~~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~---~~~~~~~~~~~~~ 320 (413)
T PLN00175 248 ---YERTVTMNSLGKTFSLTGWKIGWAIA-PPHLTWGVRQAHSFLTFATATPMQWAAVAALRAP---ESYYEELKRDYSA 320 (413)
T ss_pred ---cCcEEEEecchhhccCcchheeeeEe-CHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCC---HHHHHHHHHHHHH
Confidence 57899999999999999999999998 8888888876653 4678999999999999764 4567888899999
Q ss_pred HHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC---CCCeEEEEecCC
Q 019899 238 LYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI---EPGWFRCCFTSL 314 (334)
Q Consensus 238 ~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~---~~~~iRi~~~~~ 314 (334)
+++.+.+.|++.|+.+..|.+++|+|+++++... .++.+++..|++++||.+.||..|+.. .++++|++++ .
T Consensus 321 ~~~~l~~~L~~~g~~~~~p~g~~f~~~~~~~~~~----~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~-~ 395 (413)
T PLN00175 321 KKDILVEGLKEVGFKVYPSSGTYFVMVDHTPFGF----ENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFC-K 395 (413)
T ss_pred HHHHHHHHHHHCCCeecCCCeeEEEEEeccccCC----CCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEc-C
Confidence 9999999999999988889999999999853210 124689999888899999999988642 3579999999 6
Q ss_pred CcccHHHHHHHHHHHHHH
Q 019899 315 THEDIPLVIERIQKVAET 332 (334)
Q Consensus 315 ~~~~l~~~l~~l~~~~~~ 332 (334)
+++++++++++|++++++
T Consensus 396 ~~e~l~~~~~rL~~~~~~ 413 (413)
T PLN00175 396 DEETLRAAVERMKTKLKR 413 (413)
T ss_pred CHHHHHHHHHHHHHHHhC
Confidence 899999999999998864
No 13
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=6.5e-47 Score=348.74 Aligned_cols=329 Identities=22% Similarity=0.370 Sum_probs=263.7
Q ss_pred ChhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc-CCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccc
Q 019899 1 MAGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLA-DHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~-~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~ 79 (334)
||+|+.++.+ +.+++++|++|+|+++++..++.+++ ++||.|+++.|+|+.|...++ ..|.+++.+++.++++|.+
T Consensus 124 ia~~~~~~~g--~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~~~~~-~~g~~~v~v~~~~~~~~~~ 200 (481)
T PTZ00377 124 VAAFIERRDG--VPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSAAIT-LLGGKQVPYYLDEEKGWSL 200 (481)
T ss_pred HHHHHHHhcC--CCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHHHHHH-HcCCEEEEEEeccccCCCC
Confidence 4667766555 77899999999999999999999998 799999999999999999999 8999999999876778899
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCC-CCcchhhhhhhc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGN-EEFVSMAEILEA 158 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~-~~~~~~~~~~~~ 158 (334)
|++++++++++...++.+++++++++|+||||.++|.+++++|+++|++|+++||+||+|+.+.|.+ ..+.++..+...
T Consensus 201 d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~ 280 (481)
T PTZ00377 201 DQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLE 280 (481)
T ss_pred CHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHh
Confidence 9999999998655555578999999999999999999999999999999999999999999998843 344555443221
Q ss_pred cccC---CCcEEEEeccccc-CCCCCceEEEEee--cCHHHHHHHHHhhcc-cCCChHHHHHHHHhhCCh-------HHH
Q 019899 159 EEVD---KDRVHIIYGLSKD-LSLPGFRTGVIYS--YNESVLAAAKKLTRF-CSISAPTQRLLISMLSDT-------KFI 224 (334)
Q Consensus 159 ~~~~---~~~~~~~~s~sK~-~~~~g~r~g~i~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~-------~~~ 224 (334)
..-+ ..++++++||||. ++++|+|+||+++ .++++++.+.+.... ++.+++.|.++..++... +..
T Consensus 281 l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~ 360 (481)
T PTZ00377 281 LPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYKLASINLCSNVVGQLMTGLMCNPPREGDASYPLY 360 (481)
T ss_pred hcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHHHhheecCCChHHHHHHHHHhCCCCCCcccHHHH
Confidence 0000 1268999999998 5899999999986 378888888776543 478889999999998531 112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCceeEEeeecCCc--CCCC----ChhhHHHHHHHHHHhcCeEEcCCC
Q 019899 225 QEYLETNKRRIKKLYDSFVAGLKQL-GIRCSESSAGLYCWADMSGL--IPSY----SEKGELELWDKLLNIAKINVTPGS 297 (334)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~g~~~~~~~~~~--~~~~----~~~~~~~~~~~ll~~~gi~v~~g~ 297 (334)
.+++.+..+.++++++.+.+.|+++ |+.+..|++|+|+|++++.+ .... ...++.+++..+++++||.+.||+
T Consensus 361 ~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~ 440 (481)
T PTZ00377 361 KRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGS 440 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCc
Confidence 3334555566889999999999987 88888999999999876421 1000 001234567788888999999999
Q ss_pred CcCCC-CCCeEEEEecCCCcccHHHHHHHHHHHHHHc
Q 019899 298 ACHCI-EPGWFRCCFTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 298 ~~~~~-~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
.|+.. .++++|++++ .+++++++++++|+++++++
T Consensus 441 ~F~~~~~~~~~Rls~~-~~~e~l~~~l~rl~~~~~~~ 476 (481)
T PTZ00377 441 GFGQKPGTYHFRITIL-PPEEQIEEMVKKIKEFHESF 476 (481)
T ss_pred ccCCCCCCCEEEEEEC-CCHHHHHHHHHHHHHHHHHH
Confidence 99853 3469999999 77889999999999998763
No 14
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=3.7e-47 Score=342.72 Aligned_cols=305 Identities=24% Similarity=0.394 Sum_probs=255.5
Q ss_pred ChhhhhhhhcCCCCCCCC-cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccc
Q 019899 1 MAGFMSQVLGQAVSFDPS-QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~-~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~ 79 (334)
+|+|+.+..+ +.++++ +|++|+|+++++..++.+++++||+|++++|+|+.+...++ ..|.+++.+|+++++++.+
T Consensus 79 ia~~~~~~~g--~~~~~~~~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~-~~g~~~~~i~~~~~~~~~~ 155 (389)
T PRK08068 79 AADFYKREYG--VTLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVA-LARAQFETMPLIAENNFLP 155 (389)
T ss_pred HHHHHHHHhC--CCCCCCccEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHH-hcCCEEEEeecccccCCCC
Confidence 3566665555 667888 89999999999999999999999999999999999999998 8999999999865567889
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
|++++++.+++ +++++++++|+||||.++|.+++++|+++|++++++||+||+|+++.+.+....++.....
T Consensus 156 d~~~l~~~~~~------~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~-- 227 (389)
T PRK08068 156 DYTKIPEEVAE------KAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPG-- 227 (389)
T ss_pred CHHHHHHhccc------cceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCC--
Confidence 99999998865 7899999999999999999999999999999999999999999998886543444433322
Q ss_pred ccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccC--CChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 160 EVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCS--ISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
..++++++.||||.+|++|+|+||+++ ++++++.+.+....+. .++..|.++..++... .+++.+.++++++
T Consensus 228 --~~~~~i~~~S~SK~~g~~GlRiG~~~~-~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~ 301 (389)
T PRK08068 228 --AKDVGIELYTLSKTFNMAGWRVAFAVG-NESVIEAINLLQDHLFVSLFGAIQDAAIEALLSD---QSCVAELVARYES 301 (389)
T ss_pred --ccCCEEEEecchhccCCccceeEeEec-CHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCc---HHHHHHHHHHHHH
Confidence 156789999999999999999999998 8899999887665543 3455777777777553 2566788899999
Q ss_pred HHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcc
Q 019899 238 LYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHE 317 (334)
Q Consensus 238 ~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~ 317 (334)
+++.+.+.|+++|+.+..+.+|+|+|+++++.. ++.++...|++++||.+.||..|+...++++|++++ .+++
T Consensus 302 ~r~~~~~~L~~~g~~~~~~~g~~~~~v~~~~~~------~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~-~~~~ 374 (389)
T PRK08068 302 RRNAFISACREIGWEVDAPKGSFFAWMPVPKGY------TSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLL-TDEE 374 (389)
T ss_pred HHHHHHHHHHHCCCcccCCCeeEEEEEECCCCC------CHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEc-CCHH
Confidence 999999999999988888899999999998642 346888997777899999999987655789999998 5677
Q ss_pred cHHHHHHHHHHH
Q 019899 318 DIPLVIERIQKV 329 (334)
Q Consensus 318 ~l~~~l~~l~~~ 329 (334)
.+..++++|+++
T Consensus 375 ~l~~al~~l~~~ 386 (389)
T PRK08068 375 RLREAVERIGKL 386 (389)
T ss_pred HHHHHHHHHHHh
Confidence 788888877753
No 15
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=2.8e-47 Score=342.53 Aligned_cols=310 Identities=23% Similarity=0.462 Sum_probs=263.5
Q ss_pred ChhhhhhhhcCCCCCCCC-cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccc
Q 019899 1 MAGFMSQVLGQAVSFDPS-QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~-~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~ 79 (334)
+|+|+.+.++ +.++++ +|++|+|+++++.+++.+++++||+|++++|+|+.+...++ ..|.+++.+++..++++.+
T Consensus 66 ia~~~~~~~g--~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~~~~ 142 (378)
T PRK07682 66 IAKYLKKRFA--VSYDPNDEIIVTVGASQALDVAMRAIINPGDEVLIVEPSFVSYAPLVT-LAGGVPVPVATTLENEFKV 142 (378)
T ss_pred HHHHHHHHhC--CCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCchhhHHHHH-HcCCEEEEeecCCccCCCC
Confidence 3667776656 567776 79999999999999999999999999999999999999888 8899999999765567899
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
|++++++++++ +++++++++|+||||.+++.+++++|+++|++|++++|+||+|+++.+++. +.++..+.+
T Consensus 143 d~~~l~~~~~~------~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~-- 213 (378)
T PRK07682 143 QPAQIEAAITA------KTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEA-YTSFASIKG-- 213 (378)
T ss_pred CHHHHHhhcCc------ccEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCC-CCChhhccc--
Confidence 99999998876 789999999999999999999999999999999999999999999998653 334444332
Q ss_pred ccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 160 EVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
. .++++++.||||.++++|+|+||+++ ++++++.+..... .++.+++.|.++..++++.+ .++.+.++.+++
T Consensus 214 -~-~~~~i~~~S~SK~~~~~GlR~G~~~~-~~~~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~---~~~~~~~~~~~~ 287 (378)
T PRK07682 214 -M-RERTILISGFSKGFAMTGWRLGFIAA-PVYFSEAMLKIHQYSMMCAPTMAQFAALEALRAGN---DDVIRMRDSYRK 287 (378)
T ss_pred -c-cCCEEEEecCcccccChhhhhhhhhc-CHHHHHHHHHHHHhhccCCCHHHHHHHHHHHhCCh---HHHHHHHHHHHH
Confidence 1 46899999999999999999999998 8889998876543 34678899999999997643 346778889999
Q ss_pred HHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcc
Q 019899 238 LYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHE 317 (334)
Q Consensus 238 ~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~ 317 (334)
+++.+.+.|+++|+++..|.+++++|++++... .++.++...+++++||.+.||..|+...++++|++++ .+++
T Consensus 288 ~~~~~~~~L~~~~~~~~~p~g~~~~~~~~~~~~-----~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~-~~~~ 361 (378)
T PRK07682 288 RRNFFVTSFNEIGLTCHVPGGAFYAFPSISSTG-----LSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYA-TSLE 361 (378)
T ss_pred HHHHHHHHHHHCCCccCCCCeeEEEEEeccCCC-----CCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeC-CCHH
Confidence 999999999999998888999999999885421 1346788888877899999999997655789999999 5789
Q ss_pred cHHHHHHHHHHHHHHcC
Q 019899 318 DIPLVIERIQKVAETCK 334 (334)
Q Consensus 318 ~l~~~l~~l~~~~~~~~ 334 (334)
++++++++|++++++.+
T Consensus 362 ~l~~~l~~l~~~l~~~~ 378 (378)
T PRK07682 362 QLQEAMKRMKRFVENKK 378 (378)
T ss_pred HHHHHHHHHHHHHhhcC
Confidence 99999999999998764
No 16
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=5.5e-47 Score=343.95 Aligned_cols=314 Identities=24% Similarity=0.410 Sum_probs=261.3
Q ss_pred ChhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcccc
Q 019899 1 MAGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
+++|+.+..+ ..+++++|++|+|+++++.+++..+.++||+|+++.|+|+.|..... ..|.+++.+++.+++++.+|
T Consensus 103 ia~~~~~~~~--~~~~~~~v~it~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~-~~g~~~~~~~~~~~~~~~~d 179 (430)
T PLN00145 103 IAEYLSRDLP--YELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEARAV-FSGLEVRHFDLLPERGWEVD 179 (430)
T ss_pred HHHHHhhccC--CCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHH-HcCCEEEEeeCCcccCCcCC
Confidence 3566655545 66788999999999999999999999999999999999999988888 88999999998666788999
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++ +++++++++|+||||.+++.+++++|+++|+++|++||+||+|..+.|++..+.++..+..
T Consensus 180 ~~~l~~~~~~------~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~--- 250 (430)
T PLN00145 180 LEGVEALADE------NTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGE--- 250 (430)
T ss_pred HHHHHHHhCc------CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcc---
Confidence 9999998876 7899999999999999999999999999999999999999999999987655566655543
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecC-HHHH------HHHHHhhccc-CCChHHHHHHHHhhCChHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYN-ESVL------AAAKKLTRFC-SISAPTQRLLISMLSDTKFIQEYLETNK 232 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~-~~~~------~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 232 (334)
.+++++++||||.|+++|+|+||+++++ +.+. +.+....... +.+++.|.++..++.... ++++.+.+
T Consensus 251 --~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~--~~~~~~~~ 326 (430)
T PLN00145 251 --VAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVVDSIRNYLNISTDPATFVQGAIPQIIANTK--EEFFTKTL 326 (430)
T ss_pred --cCcEEEEeccccccCCCCeeEEEEEEecchhhhhhhHHHHHHHHHhcccCCCCHHHHHHHHHHHhcCH--HHHHHHHH
Confidence 5689999999999999999999999743 3332 3344443333 457889999999987632 56678888
Q ss_pred HHHHHHHHHHHHHHHhC-CCccc-CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEE
Q 019899 233 RRIKKLYDSFVAGLKQL-GIRCS-ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCC 310 (334)
Q Consensus 233 ~~~~~~~~~~~~~l~~~-g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~ 310 (334)
++++++++.+.+.|++. ++.+. .|++++|+|++++...-. ...++.+++..|++++||.+.||..|+. ++|+||+
T Consensus 327 ~~~~~~~~~~~~~L~~~~g~~~~~~P~ga~y~~v~l~~~~~~-~~~~~~~~~~~ll~~~gV~v~pG~~fg~--~~~lRis 403 (430)
T PLN00145 327 GLLKETADICYEKIKEIKCITCPHKPEGSMFVMVKLDLSCLS-GIKDDMDFCCKLAKEESVVVLPGSALGM--KNWLRIT 403 (430)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCcCCCeeeEEEeccChhhcC-CCCCHHHHHHHHHHhCCEEEeCccccCC--CCeEEEE
Confidence 99999999999999887 77754 689999999998742100 0013467888889999999999999975 6899999
Q ss_pred ecCCCcccHHHHHHHHHHHHHHcC
Q 019899 311 FTSLTHEDIPLVIERIQKVAETCK 334 (334)
Q Consensus 311 ~~~~~~~~l~~~l~~l~~~~~~~~ 334 (334)
++ .+++++++++++|++++.+|+
T Consensus 404 ~~-~~~~~l~~al~rl~~~~~~~~ 426 (430)
T PLN00145 404 FA-IDPPSLEDGLERLKSFCLRHA 426 (430)
T ss_pred eC-CCHHHHHHHHHHHHHHHHHhc
Confidence 99 688899999999999998874
No 17
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.5e-47 Score=340.85 Aligned_cols=305 Identities=24% Similarity=0.417 Sum_probs=259.7
Q ss_pred ChhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcccc
Q 019899 1 MAGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
+|+|+.+..+ +++++++|++|+|+++++..++.+++++||+|++++|+|+.+...++ ..|.+++.+++.+++++.+|
T Consensus 75 ia~~~~~~~~--~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~~~~d 151 (384)
T PRK06348 75 IIKYYSKNYD--LSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIE-MVGGKPIILETYEEDGFQIN 151 (384)
T ss_pred HHHHHHHHhC--CCCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHH-HcCCEEEEecCCcCcCCcCC
Confidence 4667766656 77899999999999999999999999999999999999999999998 88999999987655678899
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++ +++++++++|+||||.++|.+++++|+++|++++++||+||+|+++.+++ ...++..+..
T Consensus 152 ~~~l~~~~~~------~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~--- 221 (384)
T PRK06348 152 VKKLEALITS------KTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYE-DFVPMATLAG--- 221 (384)
T ss_pred HHHHHHhhCc------CccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCC-CccchhhcCC---
Confidence 9999998875 78999999999999999999999999999999999999999999998864 3334444432
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
..+++++++||||.++++|+|+||+++ ++++++.+..... .++.+++.|.++..++... +++.++.++.++++
T Consensus 222 -~~~~vi~~~SfSK~~~l~GlRiG~~v~-~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~r 296 (384)
T PRK06348 222 -MPERTITFGSFSKDFAMTGWRIGYVIA-PDYIIETAKIINEGICFSAPTISQRAAIYALKHR---DTIVPLIKEEFQKR 296 (384)
T ss_pred -CcCcEEEEecchhccCCccccceeeec-CHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhCc---HHHHHHHHHHHHHH
Confidence 157899999999999999999999998 7888888877654 4678899999999888653 45567788889999
Q ss_pred HHHHHHHHHhC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcc
Q 019899 239 YDSFVAGLKQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHE 317 (334)
Q Consensus 239 ~~~~~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~ 317 (334)
++.+.+.|++. ++++..+.+|+|+|++++... .+..+++..+++++||.+.||+.|+...++++|++++ .+++
T Consensus 297 ~~~~~~~L~~~~~~~~~~p~gg~~~~~~~~~~~-----~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~-~~~~ 370 (384)
T PRK06348 297 LEYAYKRIESIPNLSLHPPKGSIYAFINIKKTG-----LSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACT-VGIE 370 (384)
T ss_pred HHHHHHHHhcCCCceeccCCeeEEEEEecccCC-----CCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEec-CCHH
Confidence 99999999886 677778899999999997421 1346888887888899999999998655789999998 7889
Q ss_pred cHHHHHHHHHHH
Q 019899 318 DIPLVIERIQKV 329 (334)
Q Consensus 318 ~l~~~l~~l~~~ 329 (334)
++++++++|+++
T Consensus 371 ~l~~al~~l~~~ 382 (384)
T PRK06348 371 VLEEAFNRIEKM 382 (384)
T ss_pred HHHHHHHHHHhh
Confidence 999999998764
No 18
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=6.3e-47 Score=344.40 Aligned_cols=318 Identities=22% Similarity=0.349 Sum_probs=258.4
Q ss_pred ChhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcccc
Q 019899 1 MAGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
+|+|+.++.+ +.+++++|++|+|+++++..++. ++++||.|++++|+|+.+........|.+++.+++++++++.+|
T Consensus 82 ia~~~~~~~g--~~~~~~~I~it~G~~~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d 158 (433)
T PRK06855 82 LAELNNKRGG--AQITPDDIIFFNGLGDAIAKIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPD 158 (433)
T ss_pred HHHHHHhccC--CCCCHhHEEEcCcHHHHHHHHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCC
Confidence 4667776555 67889999999999999999985 78999999999999998765433246888999998666778899
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
+++|+++++.. .+++++++++|+||||.++|.+++++|+++|++|+++||+||+|+.+.|.+..+.++.++.+
T Consensus 159 ~~~l~~~~~~~----~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~--- 231 (433)
T PRK06855 159 LDDLENKVKYN----PSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIG--- 231 (433)
T ss_pred HHHHHHHHhcC----CCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcC---
Confidence 99999998731 25788999999999999999999999999999999999999999999987665667766643
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeec----CHH---HHHHHHHhh-cccCCChHHHHHHHHhhCChHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSY----NES---VLAAAKKLT-RFCSISAPTQRLLISMLSDTKFIQEYLETNK 232 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~----~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 232 (334)
...+++++||||.++++|+|+||++++ ++. +.+.+.... ...+.+++.|.++..++.+.++ ++++++++
T Consensus 232 --~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~-~~~~~~~~ 308 (433)
T PRK06855 232 --DVPGIALKGISKELPWPGSRCGWIEVYNADKDEVFKKYINSILNAKMIEVCSTTLPQMAIPRIMSHPEY-KNYLKERN 308 (433)
T ss_pred --cCCeEEEecCccccCCCcceEEEEEEeCCchhhHHHHHHHHHHHhhccccCCChHHHHHHHHhhcCCcH-HHHHHHHH
Confidence 346799999999999999999999973 232 233332222 2345788999999999987543 67788899
Q ss_pred HHHHHHHHHHHHHHHhC-CCcccCCCceeEEeeecCCcCCC-------CC--------------hhhHHHHHHHHHHhcC
Q 019899 233 RRIKKLYDSFVAGLKQL-GIRCSESSAGLYCWADMSGLIPS-------YS--------------EKGELELWDKLLNIAK 290 (334)
Q Consensus 233 ~~~~~~~~~~~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~-------~~--------------~~~~~~~~~~ll~~~g 290 (334)
+.++++++.+.+.|++. ++.+..|.+|||+|+++|+.... .. ..++.+++..++++.|
T Consensus 309 ~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 388 (433)
T PRK06855 309 KRYEKRSNIAYEKLKDVPGLKVNRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTG 388 (433)
T ss_pred HHHHHHHHHHHHHHhcCCCeeccCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcC
Confidence 99999999999999886 77888899999999999864200 00 0134678888888899
Q ss_pred eEEcCCCCcCCCCCCeEEEEecCCCcccHHHHHHHHHHHHHH
Q 019899 291 INVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 291 i~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
|.+.||..|+. ..+++|++++..+++++++++++|++++++
T Consensus 389 V~v~PG~~F~~-~~~~~Rls~~~~~~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 389 ICVVPLSSFCT-ELNGFRVTLLERDEEKFEWIYQTLAEKIEE 429 (433)
T ss_pred EEEecCCcCCC-CCCceEEEECCCcHHHHHHHHHHHHHHHHH
Confidence 99999999975 345699999977899999999999999875
No 19
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=6.5e-47 Score=340.69 Aligned_cols=304 Identities=24% Similarity=0.404 Sum_probs=258.6
Q ss_pred ChhhhhhhhcCCCCCCCC-cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccc
Q 019899 1 MAGFMSQVLGQAVSFDPS-QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~-~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~ 79 (334)
+|+|+.+..+ ++++++ +|++|+|+++++..++..++++||+|++++|+|+.+...++ ..|.+++.+|+.+++++.+
T Consensus 76 ia~~~~~~~~--~~~~~~~~vi~t~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~-~~G~~v~~v~~~~~~g~~~ 152 (383)
T TIGR03540 76 VADWYKRRFG--VELDPETEVLSLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTL-FAGGEPYEMPLKEENGFLP 152 (383)
T ss_pred HHHHHHHhhC--CCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEEeCCCCcchHHHHH-hcCCEEEEEecCcccCCcc
Confidence 3566666555 566776 69999999999999999999999999999999999999888 8999999999876667888
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
|++++++++++ +++++++++|+||||.++|.+++++|+++|++|++++|+||+|+++.|.+....++..+..
T Consensus 153 d~~~l~~~~~~------~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~-- 224 (383)
T TIGR03540 153 DFDAIPEDIAK------KAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDG-- 224 (383)
T ss_pred CHHHHHhhccc------cceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCC--
Confidence 99999988865 7899999999999999999999999999999999999999999999887655556555432
Q ss_pred ccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc--cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 160 EVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
..+++++++||||.+|++|+|+||+++ ++++++.+...... .+.+.+.|.++..++... .+++.++++.+++
T Consensus 225 --~~~~~i~~~SfSK~~g~~GlRiG~~i~-~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~ 298 (383)
T TIGR03540 225 --AKDVGIEFHSLSKTYNMTGWRIGMAVG-NADLIAGLGKVKTNVDSGVFQAIQYAAIAALNGP---QDVVKEIRKIYQR 298 (383)
T ss_pred --cccCEEEEEecccccCCccceeeEEeC-CHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCC---HHHHHHHHHHHHH
Confidence 146789999999999999999999998 88898888766543 356778899888888764 4566778889999
Q ss_pred HHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcc
Q 019899 238 LYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHE 317 (334)
Q Consensus 238 ~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~ 317 (334)
+++.+.+.|++.|+.+..+.+|+++|++++... +..+++..+++++||.+.||..|+...++++|++++ .+++
T Consensus 299 ~~~~~~~~L~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~-~~~~ 371 (383)
T TIGR03540 299 RRDLLLEALKKIGIDVEKPKATFYVWVPVPEGY------TSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLT-VPDE 371 (383)
T ss_pred HHHHHHHHHHhCCCEecCCCcceEEEEECCCCC------CHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEec-CCHH
Confidence 999999999999998888889999999998543 346888888888999999999997655689999998 6778
Q ss_pred cHHHHHHHHHH
Q 019899 318 DIPLVIERIQK 328 (334)
Q Consensus 318 ~l~~~l~~l~~ 328 (334)
++.+++++|++
T Consensus 372 ~l~~~l~~l~~ 382 (383)
T TIGR03540 372 RLEEAVARIKK 382 (383)
T ss_pred HHHHHHHHHhh
Confidence 88888888764
No 20
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=6.4e-47 Score=351.50 Aligned_cols=316 Identities=22% Similarity=0.371 Sum_probs=257.9
Q ss_pred ChhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcccc
Q 019899 1 MAGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
||+|+.++.+ .++++++|++|+|+++++..++.+++++||+|++++|+|+.|...+. ..|.+++.+++.++++|.+|
T Consensus 194 ia~~~~~~~~--~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~-~~g~~~v~~~~~~~~~~~~d 270 (517)
T PRK13355 194 IMQYAQLKGL--PNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVN-LAGGTAVHYRCDEQSEWYPD 270 (517)
T ss_pred HHHHHHhcCC--CCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHH-HCCCEEEEeecCcccCCCCC
Confidence 3556654322 35789999999999999999999999999999999999999999888 89999999998766789999
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++ +++++++++|+||||.+++.+++++|+++|++|+++||+||+|..+.|++..+.++..+.+
T Consensus 271 ~~~l~~~~~~------~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~--- 341 (517)
T PRK13355 271 IDDIRSKITS------RTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAP--- 341 (517)
T ss_pred HHHHHHhcCc------CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCC---
Confidence 9999998876 7899999999999999999999999999999999999999999999987765666666543
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeec-CHH----HHHHHHHhhcc-cCCChHHHHHHHHhhCChHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSY-NES----VLAAAKKLTRF-CSISAPTQRLLISMLSDTKFIQEYLETNKRR 234 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~-~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 234 (334)
...+++++||||.++++|+|+||++++ +++ +++.+...... ++.+.+.|.++..++...+...+++.+. .+
T Consensus 342 --~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~-~~ 418 (517)
T PRK13355 342 --DLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAKDYIEGLNMLANMRLCSNVPAQSIVQTALGGHQSVKDYLVPG-GR 418 (517)
T ss_pred --CCeEEEEecchhhccCcccceEEEEeeCchhhHHHHHHHHHHHhcCcCCcChHHHHHHHHHhcCCccHHHHHHHH-HH
Confidence 335777899999999999999999963 343 34444333322 5678899999999986543334555544 34
Q ss_pred HHHHHHHHHHHHHhC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC
Q 019899 235 IKKLYDSFVAGLKQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS 313 (334)
Q Consensus 235 ~~~~~~~~~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~ 313 (334)
+.++++++.+.|+++ |+.+..|.++||+|++++..... ..++.+++..+++++||.+.||..|+...++++|++++
T Consensus 419 ~~~~r~~l~~~L~~~~g~~~~~p~g~fy~~~~l~~~~~~--~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~- 495 (517)
T PRK13355 419 VYEQRELVYNALNAIPGISAVKPKAAFYIFPKIDVKKFN--IHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYL- 495 (517)
T ss_pred HHHHHHHHHHHHhcCCCcccCCCCeeeEEEeecCcccCC--CCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeC-
Confidence 455678999999888 88999999999999998752100 11345778888888999999999997656789999997
Q ss_pred CCcccHHHHHHHHHHHHHHcC
Q 019899 314 LTHEDIPLVIERIQKVAETCK 334 (334)
Q Consensus 314 ~~~~~l~~~l~~l~~~~~~~~ 334 (334)
.+++++++++++|++++++++
T Consensus 496 ~~~~~l~~a~~rl~~~~~~~~ 516 (517)
T PRK13355 496 PRLEDLEDAMDRLADFFSYYR 516 (517)
T ss_pred CCHHHHHHHHHHHHHHHHHhh
Confidence 788999999999999998753
No 21
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=1.5e-46 Score=339.83 Aligned_cols=312 Identities=22% Similarity=0.367 Sum_probs=257.9
Q ss_pred ChhhhhhhhcCCCCCCCC-cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccc
Q 019899 1 MAGFMSQVLGQAVSFDPS-QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~-~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~ 79 (334)
+|+|+.++.+ +.++++ +|++|+|+++++..++.+++++||+|++++|+|+.+...+. ..|.+++.+++..++++
T Consensus 77 ia~~~~~~~g--~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~-~~g~~v~~v~~~~~~~~-- 151 (405)
T PRK09148 77 QAAYYARRFG--VKLNPDTQVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAFGFI-MAGGVIRSVPAEPDEEF-- 151 (405)
T ss_pred HHHHHHHHhC--CCCCCCCcEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHH-hcCCEEEEEeCCCCCCC--
Confidence 3566665555 567787 89999999999999999999999999999999999998888 89999999998544443
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
+++++++++.. ..+++++++++|+||||.++|.+++++|+++|++|+++||+||+|+++.|++..+.++..+..
T Consensus 152 -~~~l~~~~~~~---~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~-- 225 (405)
T PRK09148 152 -FPALERAVRHS---IPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPG-- 225 (405)
T ss_pred -ccCHHHHHhhc---cccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCC--
Confidence 34455544421 126889999999999999999999999999999999999999999999886644444544422
Q ss_pred ccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 160 EVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
..+++++++||||.+|++|+|+||+++ ++++++.+.+... .++.+++.|.++..++... ++++.++++.+++
T Consensus 226 --~~~~~i~~~SfSK~~~~pGlR~G~~v~-~~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~~---~~~~~~~~~~~~~ 299 (405)
T PRK09148 226 --AKDVTVEFTSMSKTFSMAGWRMGFAVG-NERLIAALTRVKSYLDYGAFTPIQVAATAALNGP---QDCIAEMRELYKK 299 (405)
T ss_pred --ccCcEEEEeccccccCCcchheeeeeC-CHHHHHHHHHHHHHhccCCChHHHHHHHHHHhCc---HHHHHHHHHHHHH
Confidence 146788899999999999999999998 8899999987655 3567889999999998753 4566788889999
Q ss_pred HHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcc
Q 019899 238 LYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHE 317 (334)
Q Consensus 238 ~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~ 317 (334)
+++.+.+.|+++++.+..|.+|+|+|+++|..... .+..++...+++++||.+.||..|+...++++||+++ .+++
T Consensus 300 ~r~~l~~~L~~~~~~~~~p~~g~f~~~~l~~~~~~---~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~-~~~~ 375 (405)
T PRK09148 300 RRDVLVESFGRAGWDIPPPAASMFAWAPIPEAFRH---LGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALV-ENEQ 375 (405)
T ss_pred HHHHHHHHHHHcCCccCCCCeeEEEEEECCCccCC---CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec-CCHH
Confidence 99999999999888877889999999999864321 1246788888888999999999997555689999998 7889
Q ss_pred cHHHHHHHHHHHHHHc
Q 019899 318 DIPLVIERIQKVAETC 333 (334)
Q Consensus 318 ~l~~~l~~l~~~~~~~ 333 (334)
++.+++++|.+++.++
T Consensus 376 ~l~~al~~l~~~l~~~ 391 (405)
T PRK09148 376 RIRQAARNIKRFLSSA 391 (405)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998764
No 22
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1e-46 Score=340.26 Aligned_cols=305 Identities=22% Similarity=0.389 Sum_probs=257.2
Q ss_pred ChhhhhhhhcCCCCCCCCc-EEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccc
Q 019899 1 MAGFMSQVLGQAVSFDPSQ-IVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~~-i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~ 79 (334)
+|+|+.++.+ +.+++++ |++|+|+++++..++.+++++||+|++++|+|+.+...+. ..|.+++.++++.++++.+
T Consensus 82 ia~~~~~~~~--~~~~~~~~i~vt~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~ 158 (394)
T PRK05942 82 ITDWYHRRYG--VELDPDSEALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPL-IAGAQIYPIILKPENDWLI 158 (394)
T ss_pred HHHHHHHHHC--CCcCCCCeEEEccChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHH-HcCCEEEEeecCCccCCcc
Confidence 3567766555 6678884 9999999999999999999999999999999999998888 8999999999866667889
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
|++++++.+++ +++++++++|+||||.++|.+++++|+++|++++++||+||+|..+.+.+....++..+..
T Consensus 159 d~~~l~~~~~~------~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~-- 230 (394)
T PRK05942 159 DLSSIPEEVAQ------QAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPG-- 230 (394)
T ss_pred CHHHHHHhccc------cceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCC--
Confidence 99999998875 7899999999999999999999999999999999999999999999886655555554432
Q ss_pred ccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 160 EVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
..+.+++++||||.+|++|+|+||+++ ++++++.++.... .++.++.+|.++..+++.. ++++.+.++++++
T Consensus 231 --~~~~~i~~~SfSK~~~~~GlRiG~i~~-~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~ 304 (394)
T PRK05942 231 --AKDIGVEFHTLSKTYNMAGWRVGFVVG-NRHIIQGLRTLKTNLDYGIFSALQKAAETALQLP---DSYLQQVQERYRT 304 (394)
T ss_pred --ccccEEEEecchhccCChhhheeeeec-CHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCc---HHHHHHHHHHHHH
Confidence 145678899999999999999999998 8899999987654 4567888999988888642 4566788889999
Q ss_pred HHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcc
Q 019899 238 LYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHE 317 (334)
Q Consensus 238 ~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~ 317 (334)
+++.+.+.|++.++.+..+.+|+|+|+++|...+ +.++..++++++||.+.||..|+...++++|++++ .+.+
T Consensus 305 ~~~~~~~~L~~~~~~~~~~~~~~f~~~~~~~~~~------~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~-~~~~ 377 (394)
T PRK05942 305 RRDFLIQGLGELGWNIPPTKATMYLWVPCPVGMG------STDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLI-ADCD 377 (394)
T ss_pred HHHHHHHHHHHCCCeecCCCeeeEEEEECCCCCC------HHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEec-CCHH
Confidence 9999999999888888888999999999986432 35777777888999999999987655789999998 5566
Q ss_pred cHHHHHHHHHHH
Q 019899 318 DIPLVIERIQKV 329 (334)
Q Consensus 318 ~l~~~l~~l~~~ 329 (334)
.+.+++++++++
T Consensus 378 ~l~~~l~~l~~~ 389 (394)
T PRK05942 378 RLGEALDRLKQA 389 (394)
T ss_pred HHHHHHHHHHHh
Confidence 777777777654
No 23
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-46 Score=339.45 Aligned_cols=304 Identities=26% Similarity=0.412 Sum_probs=257.1
Q ss_pred ChhhhhhhhcCCCCCCCC-cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccc
Q 019899 1 MAGFMSQVLGQAVSFDPS-QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~-~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~ 79 (334)
+++|+.+..+ +.++++ +|++|+|+++++..++..++++||+|++++|+|+.+...++ ..|.+++.+++..++++.+
T Consensus 78 ia~~~~~~~g--~~~~~~~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~-~~g~~~~~v~~~~~~g~~~ 154 (385)
T PRK09276 78 VADWYKRRFG--VELDPETEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTI-FAGGEPYFMPLKEENGFLP 154 (385)
T ss_pred HHHHHHHHhC--CCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHH-HcCCEEEEEecCCCCCCcC
Confidence 3566665555 556777 59999999999999999999999999999999999999888 8999999999865567888
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
|++++++.+.+ +++++++++|+||||.++|.+++++|+++|++|+++||+||+|.++.+++....++..+..
T Consensus 155 d~~~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-- 226 (385)
T PRK09276 155 DLDAIPEDVAK------KAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPG-- 226 (385)
T ss_pred CHHHHHHhccc------cceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCC--
Confidence 99999888765 7899999999999999999999999999999999999999999999887655556655432
Q ss_pred ccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc--cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 160 EVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
..++++++.||||.+|++|+|+||+++ ++++++.+.+.... .+.+.+.|.++..++... ..++++.++++++
T Consensus 227 --~~~~~i~~~S~SK~~g~~GlRiG~~i~-~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~ 300 (385)
T PRK09276 227 --AKDVGIEFHSLSKTYNMTGWRIGFAVG-NADLIAGLGKVKSNVDSGVFQAIQEAGIAALNGP---QEVVEELRKIYQE 300 (385)
T ss_pred --CcCCEEEEecchhhcCCcchhheeeeC-CHHHHHHHHHHHhhccCCCCHHHHHHHHHHHcCc---HHHHHHHHHHHHH
Confidence 146789999999999999999999998 88898888776543 345667888888888652 4566788889999
Q ss_pred HHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcc
Q 019899 238 LYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHE 317 (334)
Q Consensus 238 ~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~ 317 (334)
+++.+.+.|++.++++..+.+|+|+|++++... +..++...|++++||.+.||..|+...++++|++++ .+++
T Consensus 301 ~~~~l~~~L~~~~~~~~~~~~~~~~~v~~~~~~------~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~-~~~~ 373 (385)
T PRK09276 301 RRDILVEGLRKLGLEVEPPKATFYVWAPVPKGY------TSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALT-VPDE 373 (385)
T ss_pred HHHHHHHHHHhCCCcccCCCcceEEEEECCCCC------CHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeC-CCHH
Confidence 999999999998988888889999999998643 346788898888999999999987655689999998 6778
Q ss_pred cHHHHHHHHHH
Q 019899 318 DIPLVIERIQK 328 (334)
Q Consensus 318 ~l~~~l~~l~~ 328 (334)
++.+++++|++
T Consensus 374 ~l~~~l~~l~~ 384 (385)
T PRK09276 374 RIEEAVERIKK 384 (385)
T ss_pred HHHHHHHHHhh
Confidence 88888888764
No 24
>PLN02231 alanine transaminase
Probab=100.00 E-value=4.2e-46 Score=343.61 Aligned_cols=328 Identities=22% Similarity=0.404 Sum_probs=262.5
Q ss_pred ChhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc-CCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccc
Q 019899 1 MAGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLA-DHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~-~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~ 79 (334)
||+|+.++.+ +.+++++|++|+|+++++..++..++ .+||.|+++.|+|+.|...+. ..|.+++.++++++++|.+
T Consensus 177 IA~~~~~r~g--~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~~-~~g~~~v~~~l~~~~~~~~ 253 (534)
T PLN02231 177 IAAGIEARDG--FPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASIA-LHGGTLVPYYLDEATGWGL 253 (534)
T ss_pred HHHHHHhccC--CCCCcccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHHHHH-HcCCEEEEEecCcccCCCC
Confidence 4667766555 77899999999999999999999998 479999999999999999998 8999999999976677999
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccC-CCCcchhhhhhhc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFG-NEEFVSMAEILEA 158 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~-~~~~~~~~~~~~~ 158 (334)
|+++|++++++...++.+++++++++|+||||.+++.+++++|+++|++++++||+||+|+++.|. +..+.++..+..+
T Consensus 254 d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~ 333 (534)
T PLN02231 254 EISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARS 333 (534)
T ss_pred CHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhh
Confidence 999999999876555557899999999999999999999999999999999999999999999995 4456677666432
Q ss_pred cccC--CCcEEEEecccccC-CCCCceEEEEeec--CHHHHHHHHHhhcc-cCCChHHHHHHHHhhCCh----HHHHH--
Q 019899 159 EEVD--KDRVHIIYGLSKDL-SLPGFRTGVIYSY--NESVLAAAKKLTRF-CSISAPTQRLLISMLSDT----KFIQE-- 226 (334)
Q Consensus 159 ~~~~--~~~~~~~~s~sK~~-~~~g~r~g~i~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~----~~~~~-- 226 (334)
.+++ ..++++++|+||.+ |++|+|+||+++. ++++++.+.+.... .+.+...|.++..++... ...++
T Consensus 334 ~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~~l~k~~~~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~ 413 (534)
T PLN02231 334 MGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVREQIYKVASVNLCSNISGQILASLVMSPPKPGDESYESYM 413 (534)
T ss_pred hccccCCceEEEEeccCcccccCCccceEEEEEecCCHHHHHHHHHHHhhhcCCChHHHHHHHHHhCCCCCCcchHHHHH
Confidence 1111 23689999999976 8899999999863 68888888765443 345667788777777531 11233
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCceeEEeeecC--Cc-CCCC---ChhhHHHHHHHHHHhcCeEEcCCCC
Q 019899 227 -YLETNKRRIKKLYDSFVAGLKQL-GIRCSESSAGLYCWADMS--GL-IPSY---SEKGELELWDKLLNIAKINVTPGSA 298 (334)
Q Consensus 227 -~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~g~~~~~~~~--~~-~~~~---~~~~~~~~~~~ll~~~gi~v~~g~~ 298 (334)
+..+.++.++++++.+.+.|+++ |+.+..|++|||+|.+++ .. .... ...++..++..|+++.||.+.||+.
T Consensus 414 ~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~ 493 (534)
T PLN02231 414 AEKDGILSSLARRAKTLEDALNSLEGVTCNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSG 493 (534)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcc
Confidence 33456789999999999999987 899999999999996553 21 0000 0012334678888889999999999
Q ss_pred cCCCC-CCeEEEEecCCCcccHHHHHHHHHHHHHH
Q 019899 299 CHCIE-PGWFRCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 299 ~~~~~-~~~iRi~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
|+... ..++|+++. .+++++++++++|++++++
T Consensus 494 Fg~~~g~~~~Rit~~-~~~e~l~eal~RL~~~~~~ 527 (534)
T PLN02231 494 FGQVPGTWHFRCTIL-PQEDKIPAIVSRLTEFHKS 527 (534)
T ss_pred cCCCCCCCeEEEEeC-CCHHHHHHHHHHHHHHHHH
Confidence 98633 457999997 7889999999999988765
No 25
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=2.3e-46 Score=338.79 Aligned_cols=313 Identities=20% Similarity=0.350 Sum_probs=253.6
Q ss_pred ChhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcccc
Q 019899 1 MAGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
||+|+.++.+ +++++++|++|+|+++++..++.+++++||.|++++|+|+.+...+. ..|.+++.+++.+++++.+|
T Consensus 83 ia~~~~~~~g--~~~~~~~I~it~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~-~~g~~~~~~~~~~~~~~~~d 159 (409)
T PLN00143 83 IADYLSNDLP--YQLSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVETYAI-FHHLEIRHFDLLPEKGWEVD 159 (409)
T ss_pred HHHHHHhhcC--CCCCHhhEEEecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHHHHH-HcCCEEEEEeccCCCCCcCC
Confidence 3566666555 67899999999999999999999999999999999999999999888 89999999998655678899
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
+++++++++. +++++++++|+||||.+++.+++++|+++|++|+++||+||+|.++.|.+..+.++..+..
T Consensus 160 ~~~l~~~~~~------~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~--- 230 (409)
T PLN00143 160 LDAVEAIADE------NTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFAS--- 230 (409)
T ss_pred HHHHHHhccc------CCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcc---
Confidence 9999988865 6888999999999999999999999999999999999999999999987654445444433
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCH-HHH------HHHHHhhc-ccCCChHHHHHHHHhhCChHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNE-SVL------AAAKKLTR-FCSISAPTQRLLISMLSDTKFIQEYLETNK 232 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~-~~~------~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 232 (334)
.+++++++||||.++++|+|+||++++++ .++ +.+.+... ....+.+.|.++..++.+.. .+++.+.+
T Consensus 231 --~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~--~~~~~~~~ 306 (409)
T PLN00143 231 --IVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEIADSIKKALNPAPFPPTFIQAAIPEILEKTT--EDFFSKTI 306 (409)
T ss_pred --cCcEEEEccchhhcCCCccceEEEEeeCchhhhhhHHHHHHHHHHHhccCCCCchHHHHHHHHHhcCh--HHHHHHHH
Confidence 56899999999999999999999998433 332 33333322 22347789999999987531 34566777
Q ss_pred HHHHHHHHHHHHHHHhCCCcc--cCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEE
Q 019899 233 RRIKKLYDSFVAGLKQLGIRC--SESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCC 310 (334)
Q Consensus 233 ~~~~~~~~~~~~~l~~~g~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~ 310 (334)
+.++++++.+.+.|++++... ..|++|+|+|++++..... ...++.+++..+++++||.+.||..|+. ++++|++
T Consensus 307 ~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f~w~~l~~~~~~-~~~~~~~~~~~ll~~~gV~v~pg~~f~~--~~~iRi~ 383 (409)
T PLN00143 307 NILRAALAFCYDKLKEIPCIMCPQKAEGAFFALVKLNLLLLE-DIEDDMEFCLKLAKEESLIILPGVTVGL--KNWLRIT 383 (409)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEEEEecchhhcC-CCCCHHHHHHHHHHhCCEEEeCccccCC--CCeEEEE
Confidence 788888888888888874332 3678999999999752100 0113457777878889999999999864 6899999
Q ss_pred ecCCCcccHHHHHHHHHHHHHHc
Q 019899 311 FTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 311 ~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
++ .+++++++++++|++++++|
T Consensus 384 ~~-~~~~~l~~al~rl~~~l~~~ 405 (409)
T PLN00143 384 FA-VEQSSLEDGLGRLKSFCGRH 405 (409)
T ss_pred Ec-CCHHHHHHHHHHHHHHHHHh
Confidence 99 77899999999999999876
No 26
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-46 Score=341.33 Aligned_cols=306 Identities=26% Similarity=0.394 Sum_probs=269.0
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccH
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
++++....+ +.+++++|++|+|+++|++++...++++||.|++++|+|++....++ ..|.+++.||+ ++.++|+
T Consensus 142 a~~l~~~~g--~~~~~~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~~~~-~~g~~~~~vp~---d~~G~~~ 215 (459)
T COG1167 142 AAYLLARRG--ISCEPEQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQALE-ALGARVIPVPV---DEDGIDP 215 (459)
T ss_pred HHHHHHhcC--CccCcCeEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHH-HcCCcEEecCC---CCCCCCH
Confidence 556664455 89999999999999999999999999999999999999999999999 99999999997 4568999
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCC-CCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNP-ANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p-~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++|++.++.. ++|+++++.. +||||.++|.++.++|+++|++|+++||+||.|+.+.|++.+..++..++.
T Consensus 216 e~le~~~~~~-----~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~--- 287 (459)
T COG1167 216 EALEEALAQW-----KPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDA--- 287 (459)
T ss_pred HHHHHHHhhc-----CCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCC---
Confidence 9999999875 7896655544 899999999999999999999999999999999999999887778888876
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh--cccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT--RFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
.++|++++||||++. ||+|+||+++ ++++++.+.... ...+++.+.|.+++..+..+. ..+++.+++..++++
T Consensus 288 --~~rViy~gSFSK~l~-PglRlG~vv~-p~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~-~~~hl~~lR~~y~~r 362 (459)
T COG1167 288 --PGRVIYLGSFSKTLA-PGLRLGYVVA-PPELIEKLLRLKQAADLGPSSLSQAALAAFLLSGH-YDRHLRRLRREYARR 362 (459)
T ss_pred --CCCEEEEeeehhhcc-cccceeeeeC-CHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHcCC-HHHHHHHHHHHHHHH
Confidence 799999999999997 9999999999 888888887654 446788999999999998554 588999999999999
Q ss_pred HHHHHHHHHhC---CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcC-CCCcCCCC--CCeEEEEec
Q 019899 239 YDSFVAGLKQL---GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTP-GSACHCIE--PGWFRCCFT 312 (334)
Q Consensus 239 ~~~~~~~l~~~---g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~-g~~~~~~~--~~~iRi~~~ 312 (334)
++.+.+.|++. .+.+..|.+|+++|+++|...+ ..++...++ ++|+.+.| |..|.... .+++|++++
T Consensus 363 r~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~~~~------~~~l~~~a~-~~gv~i~~~g~~f~~~~~~~~~~Rl~~s 435 (459)
T COG1167 363 RDALLEALAEYLPELATWTRPEGGLFLWLELPEGID------ARELLAAAL-EKGVVVTPLGSAFSADGDPRNGLRLSFS 435 (459)
T ss_pred HHHHHHHHHHhCCCCeeeecCCceEEEEEEcCCCCC------HHHHHHHHH-HCCCEEEcCCccccCCCCCCCeEEEEcC
Confidence 99999999997 3567789999999999998765 357777744 47999888 88887654 468999999
Q ss_pred CCCcccHHHHHHHHHHHHHHc
Q 019899 313 SLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 313 ~~~~~~l~~~l~~l~~~~~~~ 333 (334)
..++++++++++.|.++++++
T Consensus 436 ~~~~e~i~~gi~~l~~~~~~~ 456 (459)
T COG1167 436 SPSEEEIEEGIKRLAALLREA 456 (459)
T ss_pred CCCHHHHHHHHHHHHHHHHHH
Confidence 889999999999999998764
No 27
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=5.7e-46 Score=334.72 Aligned_cols=305 Identities=24% Similarity=0.416 Sum_probs=257.5
Q ss_pred ChhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcccc
Q 019899 1 MAGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
+|+|+.++.+ +++++++|++|+|+++++..++.+++++||+|++++|+|+.+...+. ..|.+++.++++.++++.+|
T Consensus 78 ia~~~~~~~g--~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~d 154 (387)
T PRK08960 78 IAGFYAQRYG--VDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLR-LVEGAAQLVPVGPDSRYQLT 154 (387)
T ss_pred HHHHHHHHhC--CCCChhhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH-hcCCeEEEEecCcccCCCCC
Confidence 3566666555 67899999999999999999999999999999999999999999888 88999999998666678899
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++.+++++++ +++++++++|+||||.++|.+++++|+++|+++|+++|+||+|.++.+++. ..++...
T Consensus 155 ~~~l~~~~~~------~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~-~~~~~~~----- 222 (387)
T PRK08960 155 PALVERHWNA------DTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVD-AASVLEV----- 222 (387)
T ss_pred HHHHHHHhCc------cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC-CCChhhc-----
Confidence 9999998876 678899999999999999999999999999999999999999999887542 2333222
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc--cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
.+++++++||||.+|++|+|+||+++ ++++++.++..... .+.+.+.|.++..++... ..+++.+.++.++++
T Consensus 223 --~~~vi~~~S~SK~~g~~GlRiG~~~~-~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~--~~~~l~~~~~~~~~~ 297 (387)
T PRK08960 223 --DDDAFVLNSFSKYFGMTGWRLGWLVA-PPAAVPELEKLAQNLYISASTPAQHAALACFEPE--TLAILEARRAEFARR 297 (387)
T ss_pred --cCCEEEEeecccccCCcccEEEEEEc-CHHHHHHHHHHHhhhccCCCHHHHHHHHHHhhcC--cHHHHHHHHHHHHHH
Confidence 46789999999999999999999998 78888888776553 466889999888888642 246678888999999
Q ss_pred HHHHHHHHHhCCCcc-cCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC-CCCeEEEEecCCCc
Q 019899 239 YDSFVAGLKQLGIRC-SESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI-EPGWFRCCFTSLTH 316 (334)
Q Consensus 239 ~~~~~~~l~~~g~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~-~~~~iRi~~~~~~~ 316 (334)
++.+.+.|+++|+.+ ..|.+|+|+|+++++.. .+..+++..+++++||.+.||..|+.. .++++|++++ .+.
T Consensus 298 ~~~l~~~L~~~~~~~~~~p~g~~f~~~~~~~~~-----~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~-~~~ 371 (387)
T PRK08960 298 RDFLLPALRELGFGIAVEPQGAFYLYADISAFG-----GDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYT-QSL 371 (387)
T ss_pred HHHHHHHHHhcCCcCCcCCCeeEEEEEeccccC-----CCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEec-CCH
Confidence 999999999988765 46889999999998621 134678888888899999999999753 3579999999 577
Q ss_pred ccHHHHHHHHHHHHH
Q 019899 317 EDIPLVIERIQKVAE 331 (334)
Q Consensus 317 ~~l~~~l~~l~~~~~ 331 (334)
+.+.+++++|.++++
T Consensus 372 ~~l~~al~~l~~~~~ 386 (387)
T PRK08960 372 PRLQEAVERIARGLR 386 (387)
T ss_pred HHHHHHHHHHHHHHh
Confidence 889999999888764
No 28
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=8e-46 Score=335.43 Aligned_cols=312 Identities=21% Similarity=0.340 Sum_probs=259.4
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccH
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
++|+.+..+ +.+++++|++|+|+++++..++.+++++||+|++++|+|+.+..... ..|.+++.+++.+++++.+|+
T Consensus 83 a~~~~~~~g--~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-~~g~~~~~i~~~~~~~~~~d~ 159 (409)
T PLN02656 83 AEYLSRDLP--YKLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYELCAA-FRHLEVRYVDLLPEKGWEVDL 159 (409)
T ss_pred HHHHHHhcC--CCCCcccEEEeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHHHHH-HcCCEEEEEeCCCcCCCCCCH
Confidence 556655444 66889999999999999999999999999999999999999988877 789999999986556788999
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
+++++++++ +++++++++|+||||.+++.+++++|+++|++++++||+||+|.++.|++..+.++..+..
T Consensus 160 ~~l~~~~~~------~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~---- 229 (409)
T PLN02656 160 DAVEALADQ------NTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGS---- 229 (409)
T ss_pred HHHHHHhcc------CceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcc----
Confidence 999998875 7889999999999999999999999999999999999999999999987655555555533
Q ss_pred CCCcEEEEecccccCCCCCceEEEEeecC-------HHHHHHHHHhhcc-cCCChHHHHHHHHhhCChHHHHHHHHHHHH
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTGVIYSYN-------ESVLAAAKKLTRF-CSISAPTQRLLISMLSDTKFIQEYLETNKR 233 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g~i~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 233 (334)
..++++++||||.++++|+|+||+++++ +++++.+.+.... .+.+.+.|.++..++.... +.++.+.++
T Consensus 230 -~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~--~~~~~~~~~ 306 (409)
T PLN02656 230 -IVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDPKIVERIKKYFDILGGPATFIQAAVPTILEQTD--ESFFKKTIN 306 (409)
T ss_pred -cCcEEEEcccchhccCcceeEEEEEEeCcccccccHHHHHHHHHHHhhhcCCCHHHHHHHHHHHhcCc--HHHHHHHHH
Confidence 5689999999999999999999999853 5788888765443 3578899999999997532 456788888
Q ss_pred HHHHHHHHHHHHHHhCC-Cc-ccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEe
Q 019899 234 RIKKLYDSFVAGLKQLG-IR-CSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCF 311 (334)
Q Consensus 234 ~~~~~~~~~~~~l~~~g-~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~ 311 (334)
+++++++.+.+.|++++ +. ...|.+|+|+|++++..... ...++.+++..+++++||.+.||+.|+. ++++|+++
T Consensus 307 ~~~~~r~~~~~~L~~~~~~~~~~~p~gg~~~w~~l~~~~~~-~~~~~~~~~~~~l~~~gV~v~pg~~fg~--~~~iRi~~ 383 (409)
T PLN02656 307 ILKQSSDICCDRIKEIPCITCPHKPEGSMAVMVKLNLSLLE-DISDDIDFCFKLAREESVIILPGTAVGL--KNWLRITF 383 (409)
T ss_pred HHHHHHHHHHHHHhhCCCCcCCcCCCeEEEEEEecchhhcC-CCCCHHHHHHHHHHhCCEEEecchhcCC--CCeEEEEe
Confidence 99999999999998873 33 34788999999998742110 0012346666778889999999999974 68999999
Q ss_pred cCCCcccHHHHHHHHHHHHHHc
Q 019899 312 TSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 312 ~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
+ .+++++++++++|++++.++
T Consensus 384 ~-~~~e~l~eal~rl~~~~~~~ 404 (409)
T PLN02656 384 A-ADPSSLEEALGRIKSFYLRH 404 (409)
T ss_pred C-CCHHHHHHHHHHHHHHHHHh
Confidence 9 68899999999999998875
No 29
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.8e-46 Score=336.31 Aligned_cols=308 Identities=22% Similarity=0.368 Sum_probs=263.2
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccH
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
|+|+.+..+ .++++++|++|+|+++++..++.+++++||+|++++|+|.++...+. ..|.+++.++++.++++.+|+
T Consensus 80 a~~~~~~~g--~~~~~~~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~ 156 (391)
T PRK08361 80 AEYYKKFYG--VDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAK-IAEAKPIRIPLREENEFQPDP 156 (391)
T ss_pred HHHHHHHhC--CCCCcccEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHH-HcCCEEEEEecCCccCCCCCH
Confidence 556655555 57889999999999999999999999999999999999999999888 899999999987666778999
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
+++++.+++ +++++++++|+||||.++|.+++++|+++|+++++++|+||+|+.+.+++....++....
T Consensus 157 ~~l~~~i~~------~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~----- 225 (391)
T PRK08361 157 DELLELITK------RTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYA----- 225 (391)
T ss_pred HHHHHhccc------ccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcC-----
Confidence 999999876 789999999999999999999999999999999999999999999887654444444432
Q ss_pred CCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHH
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLY 239 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (334)
.++++++.|+||.+|++|+|+||+++ ++++++.+..... .++.+.+.|.++..++.+.++ .+++.+.++.+++++
T Consensus 226 -~~~~i~~~s~SK~~~~~GlRiG~~~~-~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~ 302 (391)
T PRK08361 226 -PDNTILANSFSKTFAMTGWRLGFVIA-PEQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKES-WKAVEEMRKEYNERR 302 (391)
T ss_pred -CCCEEEEecCchhcCCcHhhhhhhcc-CHHHHHHHHHHHhhhccCCChHHHHHHHHHhcCCcc-cHHHHHHHHHHHHHH
Confidence 56889999999999999999999999 7888888766543 357788899999999877543 246788889999999
Q ss_pred HHHHHHHHhC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCccc
Q 019899 240 DSFVAGLKQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHED 318 (334)
Q Consensus 240 ~~~~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~ 318 (334)
+.+.+.|+++ ++.+..+.+|+++|++++... .++.++...+++++||.+.||..|+...++++|++++ .++++
T Consensus 303 ~~~~~~L~~~~~~~~~~p~g~~~~~~~l~~~~-----~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~-~~~~~ 376 (391)
T PRK08361 303 KLVLKRLKEMPHIKVFEPKGAFYVFANIDETG-----MSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYA-TSKEK 376 (391)
T ss_pred HHHHHHHHhCCCCeecCCCEEEEEEEECCCCC-----CCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEec-CCHHH
Confidence 9999999987 788888999999999997421 1346888887777999999999997666789999999 67789
Q ss_pred HHHHHHHHHHHHHH
Q 019899 319 IPLVIERIQKVAET 332 (334)
Q Consensus 319 l~~~l~~l~~~~~~ 332 (334)
+++++++|++++++
T Consensus 377 l~~al~~l~~~l~~ 390 (391)
T PRK08361 377 LIEAMERMEKALEE 390 (391)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999998875
No 30
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=1.6e-45 Score=331.85 Aligned_cols=311 Identities=24% Similarity=0.450 Sum_probs=260.3
Q ss_pred hhhhhhhhcCCCCCCC-CcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcccc
Q 019899 2 AGFMSQVLGQAVSFDP-SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~-~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
++|+.+..+ +.+++ ++|++|+|+++++.+++.+++++||+|++++|+|+++...++ ..|.+++.++.+ ++++.+|
T Consensus 77 a~~~~~~~~--~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~-~~g~~~~~~~~~-~~~~~~d 152 (391)
T PRK07309 77 ADFVKEKYN--LDYAPENEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVN-LVGAEIVEIDTT-ENDFVLT 152 (391)
T ss_pred HHHHHHHhC--CCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHH-HcCCEEEEEecC-CcCCcCC
Confidence 455555444 44554 689999999999999999999999999999999999999888 899999999974 3457899
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++.++++++.. ..+++++++++|+||||.+++.+++++++++|++|++++|+|++|+++.+++....++....
T Consensus 153 ~~~l~~~~~~~---~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~---- 225 (391)
T PRK07309 153 PEMLEKAILEQ---GDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYL---- 225 (391)
T ss_pred HHHHHHHhhcc---CCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhc----
Confidence 99999998642 12589999999999999999999999999999999999999999999998665445555442
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc--cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
.++++++.|+||.+|++|+|+||+++ ++++++.+...... .+.+++.|.++..++++..+ +....+++++++
T Consensus 226 --~~~~i~~~S~SK~~g~~GlRvG~~v~-~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~---~~~~~~~~~~~~ 299 (391)
T PRK07309 226 --PDQTILINGLSKSHAMTGWRIGLIFA-PAEFTAQLIKSHQYLVTAATTMAQFAAVEALTNGKD---DALPMKKEYIKR 299 (391)
T ss_pred --cCCEEEEecChhhccCccceeEEEEe-CHHHHHHHHHHHhhcccCCChHHHHHHHHHHhCChh---HHHHHHHHHHHH
Confidence 57899999999999999999999998 78888888765432 45788899999999976432 224567788889
Q ss_pred HHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCccc
Q 019899 239 YDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHED 318 (334)
Q Consensus 239 ~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~ 318 (334)
++++.+.|++.++.+..|.+|+++|+++|.... .++.++++++++++||.+.||..|+...++++|++++ .++++
T Consensus 300 ~~~~~~~l~~~~~~~~~p~gg~~~~~~l~~~~~----~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~-~~~~~ 374 (391)
T PRK07309 300 RDYIIEKMTDLGFKIIKPDGAFYIFAKIPAGYN----QDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYA-ASMET 374 (391)
T ss_pred HHHHHHHHHHCCCeecCCCeeEEEEEECCCCCC----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec-CCHHH
Confidence 999999999989988889999999999886432 1345788887888999999999998766789999998 57789
Q ss_pred HHHHHHHHHHHHHHcC
Q 019899 319 IPLVIERIQKVAETCK 334 (334)
Q Consensus 319 l~~~l~~l~~~~~~~~ 334 (334)
+++++++|++++++++
T Consensus 375 l~~~i~~l~~~~~~~~ 390 (391)
T PRK07309 375 IKEAMKRLKEYMEEHA 390 (391)
T ss_pred HHHHHHHHHHHHHhhc
Confidence 9999999999998764
No 31
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=9.8e-46 Score=334.20 Aligned_cols=307 Identities=21% Similarity=0.400 Sum_probs=252.0
Q ss_pred ChhhhhhhhcCCCC-CCCC-cEEEecCcHHHHHHHHHHhcCC---CCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCC
Q 019899 1 MAGFMSQVLGQAVS-FDPS-QIVLTAGATPAVEILCFCLADH---GNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTD 75 (334)
Q Consensus 1 i~~~~~~~~~~~~~-~~~~-~i~~~~g~~~~~~~~~~~l~~~---gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~ 75 (334)
||+|+.++.+ +. ++++ +|++|+|+++++..++.+++++ ||.|++++|+|+.+...++ ..|.+++.+|++.++
T Consensus 74 ia~~~~~~~g--~~~~~~~~~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~-~~g~~~~~vp~~~~~ 150 (396)
T PRK09147 74 IAAWLERRYG--LPALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAAL-LAGAEPYFLNCDPAN 150 (396)
T ss_pred HHHHHHHHhC--CCcCCccceEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHH-hcCCEEEEeccCccc
Confidence 3566665545 55 7775 8999999999999999999999 8999999999999999988 899999999997667
Q ss_pred CccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCC-Ccchhhh
Q 019899 76 NFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNE-EFVSMAE 154 (334)
Q Consensus 76 ~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~ 154 (334)
++.+|++.+++.+.+ +++++++++|+||||.++|.+++++|+++|++|+++||+||+|.++.|++. ...+...
T Consensus 151 ~~~~d~~~l~~~~~~------~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 224 (396)
T PRK09147 151 NFAPDFDAVPAEVWA------RTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLE 224 (396)
T ss_pred cCccCHHHHHHHHhh------ccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhh
Confidence 789999999988765 789999999999999999999999999999999999999999999988653 1212111
Q ss_pred hhhccc-cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCChHHHHHHHHHH
Q 019899 155 ILEAEE-VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDTKFIQEYLETN 231 (334)
Q Consensus 155 ~~~~~~-~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 231 (334)
.....+ .+.+++++++||||.++++|+|+||+++ ++++++.+.+... .++.+++.|.++...+.. .+++.+.
T Consensus 225 ~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~-~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~----~~~~~~~ 299 (396)
T PRK09147 225 AAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAG-DAALLKKFLLYRTYHGCAMPPAVQAASIAAWND----EAHVREN 299 (396)
T ss_pred hccccCccccccEEEEeccccccCCccceeeeecC-CHHHHHHHHHHhhhcccCCCHHHHHHHHHHhcc----hhHHHHH
Confidence 110000 0147899999999999999999999998 7888888876554 346788888887777654 3456778
Q ss_pred HHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCC------CCCC
Q 019899 232 KRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHC------IEPG 305 (334)
Q Consensus 232 ~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~------~~~~ 305 (334)
++.++++++.+.+.|++. +.+..|.+|+|+|+++|. +..+++..+++++||.+.||..|+. ..++
T Consensus 300 ~~~~~~~~~~~~~~L~~~-~~~~~p~~g~f~~~~~~~--------~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~ 370 (396)
T PRK09147 300 RALYREKFDAVTPILAPV-LDVQLPDAGFYLWAKVPG--------DDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAG 370 (396)
T ss_pred HHHHHHHHHHHHHHHHHh-cCCCCCCeeEEEEEECCC--------CHHHHHHHHHHhCCEEEeCCccccccccCCCCCCC
Confidence 888999999999999875 666778999999999981 2367888888889999999998863 1257
Q ss_pred eEEEEecCCCcccHHHHHHHHHHHHH
Q 019899 306 WFRCCFTSLTHEDIPLVIERIQKVAE 331 (334)
Q Consensus 306 ~iRi~~~~~~~~~l~~~l~~l~~~~~ 331 (334)
++|++++ .+++++++++++|+++++
T Consensus 371 ~iRi~~~-~~~~~l~~~l~rl~~~~~ 395 (396)
T PRK09147 371 RVRIALV-APLAECVEAAERIVDFCR 395 (396)
T ss_pred eEEEEec-CCHHHHHHHHHHHHHHhc
Confidence 9999999 578899999999998874
No 32
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=9e-46 Score=335.60 Aligned_cols=304 Identities=24% Similarity=0.438 Sum_probs=256.2
Q ss_pred CCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHH
Q 019899 13 VSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQAR 92 (334)
Q Consensus 13 ~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~ 92 (334)
..+++++|++|+|+++++..++.+++++||+|+++.|+|+.+...++ ..|.+++.+++.+++++.+|++++++++++
T Consensus 100 ~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~-~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~-- 176 (412)
T PTZ00433 100 STIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCK-AYGIEMRFYNCRPEKDWEADLDEIRRLVDD-- 176 (412)
T ss_pred CCCChhhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHH-HcCCEEEEEecCccccCcCCHHHHHHHhcc--
Confidence 45789999999999999999999999999999999999999999988 899999999986666789999999988875
Q ss_pred HcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEecc
Q 019899 93 KRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGL 172 (334)
Q Consensus 93 ~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 172 (334)
+++++++++|+||||.+++.+++++|+++|+++|++||+||+|.++.|++..+.++..+.. ..++++++||
T Consensus 177 ----~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-----~~~~i~~~Sf 247 (412)
T PTZ00433 177 ----RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDT-----TVPRVILGGT 247 (412)
T ss_pred ----CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccC-----CCceEEEccc
Confidence 7899999999999999999999999999999999999999999999887654455555543 3457899999
Q ss_pred cccCCCCCceEEEEeecC-----HHHHHHHHHhhc-ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019899 173 SKDLSLPGFRTGVIYSYN-----ESVLAAAKKLTR-FCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGL 246 (334)
Q Consensus 173 sK~~~~~g~r~g~i~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 246 (334)
||.+|++|+|+||+++.+ +++++.+..... .++.+++.|.++..++... .+.++.+.++.++++++.+.+.|
T Consensus 248 SK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~~r~~l~~~L 325 (412)
T PTZ00433 248 AKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRLGMLVCGPCSVVQAALGEALLNT--PQEHLEQIVAKLEEGAMVLYNHI 325 (412)
T ss_pred hhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHHhhccCCCChHHHHHHHHHHhcC--cHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999722 456777766544 3578999999999888753 25667888889999999999999
Q ss_pred HhC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHHHH
Q 019899 247 KQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIER 325 (334)
Q Consensus 247 ~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l~~ 325 (334)
++. ++.+..|.+|+|+|++++...-. ...++.+++..|++++||.+.||..|+. ++++|++++ ..++++++++++
T Consensus 326 ~~~~~~~~~~p~gg~f~~~~l~~~~~~-~~~~~~~~~~~ll~~~gV~v~pg~~f~~--~~~iRis~~-~~~e~l~~al~~ 401 (412)
T PTZ00433 326 GECIGLSPTMPRGSMFLMSRLDLEKFR-DIKSDVEFYEKLLEEENVQVLPGEIFHM--PGFTRLTIS-RPVEVLREAVER 401 (412)
T ss_pred hcCCCCcccCCCeeEEEEEEechhhcC-CCCCHHHHHHHHHHhcCEEEeCccccCC--CCeEEEEec-CCHHHHHHHHHH
Confidence 885 78878899999999998742100 0012468889988778999999999864 689999998 568899999999
Q ss_pred HHHHHHHcC
Q 019899 326 IQKVAETCK 334 (334)
Q Consensus 326 l~~~~~~~~ 334 (334)
|.+++++++
T Consensus 402 l~~~~~~~~ 410 (412)
T PTZ00433 402 IKAFCERHK 410 (412)
T ss_pred HHHHHHHhc
Confidence 999998764
No 33
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=8.7e-46 Score=334.13 Aligned_cols=310 Identities=22% Similarity=0.346 Sum_probs=258.6
Q ss_pred ChhhhhhhhcCCCC-CCCC-cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcc
Q 019899 1 MAGFMSQVLGQAVS-FDPS-QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFA 78 (334)
Q Consensus 1 i~~~~~~~~~~~~~-~~~~-~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~ 78 (334)
+|+|+.++.+ +. ++++ +|++|+|+++++..++.+++++||.|+++.|+|+.+...++ ..|.+++.+++++++++.
T Consensus 90 ia~~~~~~~g--~~~~~~~~~I~it~Gs~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~-~~g~~v~~v~~~~~~~~~ 166 (410)
T PRK06290 90 AARYMEKVFG--VKDIDPVTEVIHSIGSKPALAMLPSCFINPGDVTLMTVPGYPVTGTHTK-YYGGEVYNLPLLEENNFL 166 (410)
T ss_pred HHHHHHHHcC--CCcCCCcceEEEccCHHHHHHHHHHHhCCCCCEEEEeCCCCccHHHHHH-HcCCEEEEEecCCCcCCc
Confidence 3566665545 55 7786 79999999999999999999999999999999999999998 899999999997666788
Q ss_pred ccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhc
Q 019899 79 FSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEA 158 (334)
Q Consensus 79 ~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~ 158 (334)
+|++++++.+++ +++++++++|+||||.++|.+++++|+++|++|+++||+||+|+++.+++. ..++..+..
T Consensus 167 ~d~~~l~~~~~~------~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~-~~s~~~~~~- 238 (410)
T PRK06290 167 PDLDSIPKDIKE------KAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGK-PLSFLSVPG- 238 (410)
T ss_pred CCHHHHHHhhcc------cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCC-CcChhcCCC-
Confidence 899999988865 789999999999999999999999999999999999999999999887542 334444432
Q ss_pred cccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhccc--CCChHHHHHHHHhhCChHHHHHHHHHHHHHHH
Q 019899 159 EEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFC--SISAPTQRLLISMLSDTKFIQEYLETNKRRIK 236 (334)
Q Consensus 159 ~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 236 (334)
..+++++++||||.+|++|+|+||+++ ++++++.+......+ +.+.+.|.++..++...+ +..+.++.++
T Consensus 239 ---~~~~~I~i~SfSK~~g~~GlRiG~ii~-~~~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~----~~~~~~~~~~ 310 (410)
T PRK06290 239 ---AKEVGVEIHSLSKAYNMTGWRLAFVVG-NELIVKAFATVKDNNDSGQFIAIQKAGIYALDHPE----ITEKIREKYS 310 (410)
T ss_pred ---ccccEEEEeechhhcCCchhheEeEEe-CHHHHHHHHHHHhccccCCcHHHHHHHHHHhhCcH----HHHHHHHHHH
Confidence 146789999999999999999999998 888988888765543 445688888888887643 4567788899
Q ss_pred HHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCC-CChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC--
Q 019899 237 KLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPS-YSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS-- 313 (334)
Q Consensus 237 ~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-- 313 (334)
++++.+.+.|++.|+.+..+.+|+++|+++|..... ....++.++++.|+++.++.+.||..|+ +++||+++.
T Consensus 311 ~~~~~l~~~L~~~g~~~~~p~g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~----~~lRi~~~~~~ 386 (410)
T PRK06290 311 RRLDKLVKILNEVGFKAEMPGGTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDDAG----HFLRFSVTFEA 386 (410)
T ss_pred HHHHHHHHHHHhCCCeecCCCeeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEECCcccc----CeEEEEEEccc
Confidence 999999999999999888899999999999864321 1113567899998887778888987653 699999984
Q ss_pred CCcccHHHHHHHHHHHHHHc
Q 019899 314 LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 314 ~~~~~l~~~l~~l~~~~~~~ 333 (334)
.++++.+++++.|++.+.+.
T Consensus 387 ~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 387 KDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred ccccchhHHHHHHHHHHhhc
Confidence 48899999999999998774
No 34
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-45 Score=334.25 Aligned_cols=314 Identities=22% Similarity=0.385 Sum_probs=264.5
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccH
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
++++.+..+ ..+++++|++|+|+++|+..++.+++++||+|++++|+|+.|...+. ..+..++.+++..++++.+|+
T Consensus 80 a~~l~~~~g--~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~~-~~~~~~~~v~~~~~~~~~~~~ 156 (402)
T PRK06107 80 IAKLERRNG--LHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVL-ANDGTPVIVACPEEQGFKLTP 156 (402)
T ss_pred HHHHHHhcC--CCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHHH-HcCCEEEEecCCcccCCCCCH
Confidence 556666555 66788999999999999999999999999999999999999988877 778888888876556778999
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc-CcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK-NIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~-~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
+++++.++. +++++++++|+||||.++|.+++++++++|+++ ++++|+||+|+.+.|.+..+.++..+.+ +
T Consensus 157 ~~l~~~~~~------~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~--~ 228 (402)
T PRK06107 157 EALEAAITP------RTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAP--E 228 (402)
T ss_pred HHHHhhcCc------CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCc--C
Confidence 999998865 788999999999999999999999999999998 9999999999999887655556665533 1
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
. .+++++++||||.++++|+|+||+++ ++++++.+..... .++.+.+.|.++..++... ..++++.++.++++
T Consensus 229 ~-~~~vi~~~S~SK~~~~pGlRiG~~~~-~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~---~~~~~~~~~~~~~~ 303 (402)
T PRK06107 229 L-RDRVLVTNGVSKTYAMTGWRIGYAAG-PADLIAAINKLQSQSSSCPSSISQAAAAAALNGD---QSFVTESVAVYKQR 303 (402)
T ss_pred c-cCCEEEEeccchhhcCcccceeeeec-CHHHHHHHHHHHHhcccCCChHHHHHHHHHhcCC---hHHHHHHHHHHHHH
Confidence 1 46899999999999999999999998 8889998887664 3578999999999999753 35677888899999
Q ss_pred HHHHHHHHHhC-CCcccCCCceeEEeeecCCcCCC---C--ChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEec
Q 019899 239 YDSFVAGLKQL-GIRCSESSAGLYCWADMSGLIPS---Y--SEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFT 312 (334)
Q Consensus 239 ~~~~~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~---~--~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~ 312 (334)
++.+.+.|+++ |+.+..+++|+++|++++..... . ...+..+++..+++++||.+.||..|+. ++++|++++
T Consensus 304 ~~~~~~~L~~~~g~~~~~p~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~--~~~iRis~~ 381 (402)
T PRK06107 304 RDYALALLNAIPGLSCLVPDGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGL--SPYFRLSIA 381 (402)
T ss_pred HHHHHHHHhcCCCCcccCCCcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCC--CCeEEEEeC
Confidence 99999999887 78888899999999998642111 0 0124457888888889999999999975 679999999
Q ss_pred CCCcccHHHHHHHHHHHHHHcC
Q 019899 313 SLTHEDIPLVIERIQKVAETCK 334 (334)
Q Consensus 313 ~~~~~~l~~~l~~l~~~~~~~~ 334 (334)
.+++++++++++|.+++++.+
T Consensus 382 -~~~e~l~~~l~~l~~~l~~~~ 402 (402)
T PRK06107 382 -TSLETLEEACARIERAVAALR 402 (402)
T ss_pred -CCHHHHHHHHHHHHHHHHhcC
Confidence 689999999999999998753
No 35
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=1.2e-45 Score=332.89 Aligned_cols=309 Identities=23% Similarity=0.405 Sum_probs=258.9
Q ss_pred hhhhhhhhcCCCCCCCC-cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcccc
Q 019899 2 AGFMSQVLGQAVSFDPS-QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~-~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
++|+.+..+ +.++++ +|++|+|+++++..++.+++++||+|++++|+|+.+...++ ..|.+++.+++++ +++.+|
T Consensus 73 a~~~~~~~g--~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~-~~g~~~~~~~~~~-~~~~~~ 148 (387)
T PRK08912 73 AAHYARFQG--LDLDPETEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLPLIR-RAGGVPRLVRLEP-PHWRLP 148 (387)
T ss_pred HHHHHHHhC--CCCCCcccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHH-HcCCEEEEEecCc-ccCcCC
Confidence 556665555 667888 99999999999999999999999999999999999999998 9999999999853 457899
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++.+++ +++++++++|+||||.++|.+++++|+++|++|++++|+||+|+++.+++....++..+.+
T Consensus 149 ~~~l~~~~~~------~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~--- 219 (387)
T PRK08912 149 RAALAAAFSP------RTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPG--- 219 (387)
T ss_pred HHHHHHHhCc------cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCC---
Confidence 9999998875 7899999999999999999999999999999999999999999998886644445444322
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc--cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
. .+++++++|+||.+|++|+|+||+++ ++++++.+...... ++.++..|.++..++... ++++++.+++++++
T Consensus 220 ~-~~~~i~~~S~SK~~g~~GlRiG~~~~-~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~ 294 (387)
T PRK08912 220 M-RERTVKIGSAGKIFSLTGWKVGFVCA-APPLLRVLAKAHQFLTFTTPPNLQAAVAYGLGKP---DDYFEGMRADLARS 294 (387)
T ss_pred c-cCceEEEeechhhccCcCceeEEEec-CHHHHHHHHHHHhhccccCChHHHHHHHHHHhCC---HHHHHHHHHHHHHH
Confidence 1 46899999999999999999999998 88888888766543 566777788887777542 34557788899999
Q ss_pred HHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC--CCCeEEEEecCCCc
Q 019899 239 YDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI--EPGWFRCCFTSLTH 316 (334)
Q Consensus 239 ~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~--~~~~iRi~~~~~~~ 316 (334)
++.+.+.|++.|+++..+.+++|+|++++.... ..++.++++.+++++||.+.||..|+.. ..+++|++++ .++
T Consensus 295 ~~~l~~~L~~~g~~~~~~~g~~~l~~~l~~~~~---~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~-~~~ 370 (387)
T PRK08912 295 RDRLAAGLRRIGFPVLPSQGTYFLTVDLAPLGL---AEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFA-KRD 370 (387)
T ss_pred HHHHHHHHHhCCCcccCCCcceEEEecccccCC---CCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEe-CCH
Confidence 999999999999988888999999999986211 1134678899888899999999988543 3589999999 568
Q ss_pred ccHHHHHHHHHHHHHH
Q 019899 317 EDIPLVIERIQKVAET 332 (334)
Q Consensus 317 ~~l~~~l~~l~~~~~~ 332 (334)
+++++++++|++++++
T Consensus 371 ~~l~~~l~rl~~~l~~ 386 (387)
T PRK08912 371 ATLDEAVERLAAARRR 386 (387)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999998875
No 36
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=1.1e-45 Score=332.35 Aligned_cols=303 Identities=18% Similarity=0.307 Sum_probs=251.8
Q ss_pred hhhhhhhhcCCCCCCC-CcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcccc
Q 019899 2 AGFMSQVLGQAVSFDP-SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~-~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
++|+.+..+ ..+++ ++|++|+|+++++..++++++++||+|+++.|+|..+...++ ..|.+++.+++++ +++.+|
T Consensus 76 a~~l~~~~g--~~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-~~g~~~~~v~~~~-~~~~~d 151 (384)
T PRK12414 76 AEKTERLYG--ARYDPASEVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYAPIVR-LQGATPVAIKLSP-EDFRVN 151 (384)
T ss_pred HHHHHHHhC--CCCCCCCcEEEECChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHH-HcCCEEEEEecCc-cccccC
Confidence 455555445 44444 689999999999999999999999999999999999998888 8899999999853 457899
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++.++++++. +++++++++|+||||.+++.+++++|+++|++|++++|+||+|+++.|++....++..+..
T Consensus 152 ~~~l~~~l~~------~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~--- 222 (384)
T PRK12414 152 WDEVAAAITP------RTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRE--- 222 (384)
T ss_pred HHHHHhhcCc------ccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcC---
Confidence 9999998875 7899999999999999999999999999999999999999999999887644434433321
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
. .++++++.||||.+|++|+|+||+++ ++++++.+.+... .++.+.+.|.++..++...++ ..+.++.++++
T Consensus 223 ~-~~~~i~~~SfSK~~~~pGlRiG~~v~-~~~l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~~----~~~~~~~~~~~ 296 (384)
T PRK12414 223 L-AERSVIVSSFGKSYHVTGWRVGYCLA-PAELMDEIRKVHQFMVFSADTPMQHAFAEALAEPAS----YLGLGAFYQRK 296 (384)
T ss_pred c-cCcEEEEecccccccCccceEEEEec-CHHHHHHHHHHHhheecCCCcHHHHHHHHHhcCChH----HHHHHHHHHHH
Confidence 1 46899999999999999999999998 7888888877653 467889999999999977543 23467788999
Q ss_pred HHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCC--CCeEEEEecCCCc
Q 019899 239 YDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIE--PGWFRCCFTSLTH 316 (334)
Q Consensus 239 ~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~--~~~iRi~~~~~~~ 316 (334)
++.+.+.|++.|+.+..+.+|+|+|+++++... .++.+++..+++++||.+.||..|+... .+++|++++ .++
T Consensus 297 r~~l~~~L~~~g~~~~~~~gg~~~~~~~~~~~~----~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~-~~~ 371 (384)
T PRK12414 297 RDLLARELAGSRFELLPSEGSFFMLARFRHFSD----ESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFS-KDD 371 (384)
T ss_pred HHHHHHHHHhCCCeecCCCcceEEEEcccccCC----CCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEec-CCH
Confidence 999999999999888889999999999875321 1235777777888999999999886432 579999999 578
Q ss_pred ccHHHHHHHHHH
Q 019899 317 EDIPLVIERIQK 328 (334)
Q Consensus 317 ~~l~~~l~~l~~ 328 (334)
+++++++++|++
T Consensus 372 ~~~~~~~~rl~~ 383 (384)
T PRK12414 372 ATLVEGARRLCS 383 (384)
T ss_pred HHHHHHHHHHhh
Confidence 999999999875
No 37
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.5e-45 Score=330.43 Aligned_cols=307 Identities=23% Similarity=0.364 Sum_probs=254.8
Q ss_pred hhhhhhhhcCCCCCC-CCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcccc
Q 019899 2 AGFMSQVLGQAVSFD-PSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~-~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
++++.+.++ +.++ +++|++|+|+++++..++..++++||+|++++|+|..+...++ ..|.+++.++. ++++.+|
T Consensus 75 ~~~l~~~~g--~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~-~~g~~~~~v~~--~~~~~~d 149 (389)
T PRK05957 75 TQKLQQDNG--IELNNEQAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAIT-MAGCQPILVPT--DDNYQLQ 149 (389)
T ss_pred HHHHHHHhC--CCCCCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHH-hcCCEEEEeec--CCCCCcC
Confidence 455555445 5555 6789999999999999999999999999999999999988877 88999999997 4567899
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++ +++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+++.+++....+...+..
T Consensus 150 ~~~l~~~i~~------~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~--- 220 (389)
T PRK05957 150 PEAIEQAITP------KTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPG--- 220 (389)
T ss_pred HHHHHHhcCc------CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCC---
Confidence 9999999875 7899999999999999999999999999999999999999999999886543333333322
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc--cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
..++++++.||||.+|++|+|+||+++ ++++++.+...... .+.+.+.|.++..++.... .++++.++.++++
T Consensus 221 -~~~~~i~~~S~SK~~g~~GlRiG~~~~-~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~---~~~~~~~~~~~~~ 295 (389)
T PRK05957 221 -SGNHTISLYSLSKAYGFASWRIGYMVI-PIHLLEAIKKIQDTILICPPVVSQYAALGALQVGK---SYCQQHLPEIAQV 295 (389)
T ss_pred -ccCcEEEEecchhhccCccceeEEEec-CHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCCh---HHHHHHHHHHHHH
Confidence 156899999999999999999999998 78999999876654 3567789999888887632 2345555668899
Q ss_pred HHHHHHHHHhC-C-CcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCc
Q 019899 239 YDSFVAGLKQL-G-IRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTH 316 (334)
Q Consensus 239 ~~~~~~~l~~~-g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~ 316 (334)
++.+.+.|++. + +.+..+.+|+|+|++++... ++.++++++++++||.+.||+.|+...++++|++++..++
T Consensus 296 r~~l~~~L~~~~~~~~~~~~~gg~~~~~~~~~~~------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~ 369 (389)
T PRK05957 296 RQILLKSLGQLQDRCTLHPANGAFYCFLKVNTDL------NDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQK 369 (389)
T ss_pred HHHHHHHHHhcCCCccccCCCeeEEEEEeCCCCC------ChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCH
Confidence 99999999886 4 36667888999999997543 3468999988889999999999976556799999986688
Q ss_pred ccHHHHHHHHHHHHHHc
Q 019899 317 EDIPLVIERIQKVAETC 333 (334)
Q Consensus 317 ~~l~~~l~~l~~~~~~~ 333 (334)
+++++++++|.+.++++
T Consensus 370 ~~l~~~~~~l~~~~~~~ 386 (389)
T PRK05957 370 ATAKEGIERLVQGLKTI 386 (389)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999988753
No 38
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.9e-45 Score=331.48 Aligned_cols=307 Identities=21% Similarity=0.434 Sum_probs=259.0
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCC-CCcccc
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRST-DNFAFS 80 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~-~~~~~~ 80 (334)
++|+.+..+ ..+++++|++|+|+++++..++..++++||.|++++|+|+.+...++ ..|.+++.+|++.+ +++.+|
T Consensus 71 a~~~~~~~~--~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~~d 147 (382)
T PRK06108 71 ARYVSRLHG--VATPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVAAPK-ILGARVVCVPLDFGGGGWTLD 147 (382)
T ss_pred HHHHHHHhC--CCcCcceEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHH-HCCCEEEEeeCCCCCCCccCC
Confidence 556665545 56889999999999999999999999999999999999999999888 89999999998642 457799
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccC-CCCcchhhhhhhcc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFG-NEEFVSMAEILEAE 159 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~-~~~~~~~~~~~~~~ 159 (334)
++++++.+++ +++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+++.++ +....++..+..
T Consensus 148 ~~~l~~~~~~------~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~-- 219 (382)
T PRK06108 148 LDRLLAAITP------RTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAE-- 219 (382)
T ss_pred HHHHHHhcCc------cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCC--
Confidence 9999998865 7889999999999999999999999999999999999999999999886 333334333332
Q ss_pred ccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 160 EVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
..++++++.|+||.+|++|+|+||+++ ++++++.+..... ..+.+++.|.++..++... .+++.+.++++++
T Consensus 220 --~~~~~i~~~S~SK~~g~~G~RiG~~~~-~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~---~~~~~~~~~~~~~ 293 (382)
T PRK06108 220 --PDDRIIFVNSFSKNWAMTGWRLGWLVA-PPALGQVLEKLIEYNTSCVAQFVQRAAVAALDEG---EDFVAELVARLRR 293 (382)
T ss_pred --CcCCEEEEeechhhccCcccceeeeeC-CHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCC---hHHHHHHHHHHHH
Confidence 146899999999999999999999998 7888888876543 3457888999888888764 3455777888999
Q ss_pred HHHHHHHHHHhC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCc
Q 019899 238 LYDSFVAGLKQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTH 316 (334)
Q Consensus 238 ~~~~~~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~ 316 (334)
+++.+.+.|++. ++++..|.+|+++|++++... +..+++..|++++||.+.||..|+...++++|++++. ++
T Consensus 294 ~~~~l~~~L~~~~~~~~~~p~~g~~~~~~l~~~~------~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~-~~ 366 (382)
T PRK06108 294 SRDHLVDALRALPGVEVAKPDGAMYAFFRIPGVT------DSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR-DP 366 (382)
T ss_pred HHHHHHHHHHhCCCCcccCCCeeEEEEEeCCCCC------CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CH
Confidence 999999999887 788888899999999998642 3468889988889999999998876557899999995 89
Q ss_pred ccHHHHHHHHHHHHHH
Q 019899 317 EDIPLVIERIQKVAET 332 (334)
Q Consensus 317 ~~l~~~l~~l~~~~~~ 332 (334)
+++++++++|++++++
T Consensus 367 ~~l~~~l~~l~~~l~~ 382 (382)
T PRK06108 367 ARLDEAVERLRRFLAR 382 (382)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 9999999999998753
No 39
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=2.2e-45 Score=332.47 Aligned_cols=303 Identities=24% Similarity=0.403 Sum_probs=253.9
Q ss_pred CCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHH
Q 019899 13 VSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQAR 92 (334)
Q Consensus 13 ~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~ 92 (334)
..+++++|++|+|+++++..++.+++++||+|++++|+|..+...++ ..|.+++.+++..++++++|++.+++++++
T Consensus 91 ~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~~~~-~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~-- 167 (401)
T TIGR01264 91 GPIEADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYETLAE-SMGIEVKLYNLLPDKSWEIDLKQLESLIDE-- 167 (401)
T ss_pred CCCCHHHEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHHHHHH-HcCCEEEEeecCCccCCCCCHHHHHHHhcc--
Confidence 34788999999999999999999999999999999999999999888 899999999986556789999999988875
Q ss_pred HcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEecc
Q 019899 93 KRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGL 172 (334)
Q Consensus 93 ~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 172 (334)
+++++++++|+||||.+++.+++++|+++|+++|++||+||+|.++.+++..+.++..+.+ ..++++++||
T Consensus 168 ----~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-----~~~vi~~~Sf 238 (401)
T TIGR01264 168 ----KTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSS-----TVPILSCGGL 238 (401)
T ss_pred ----CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCC-----CCcEEEEccC
Confidence 6789999999999999999999999999999999999999999999987655556665543 3468999999
Q ss_pred cccCCCCCceEEEEeecCH-----HHHHHHHHhhc-ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019899 173 SKDLSLPGFRTGVIYSYNE-----SVLAAAKKLTR-FCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGL 246 (334)
Q Consensus 173 sK~~~~~g~r~g~i~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 246 (334)
||.++++|+|+||++++++ ++++.+..... .++.+++.|.++..++... .++++.+.++.++++++.+.+.|
T Consensus 239 SK~~~~~GlRiG~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~l~~~~~~~~~~r~~l~~~L 316 (401)
T TIGR01264 239 AKRWLVPGWRLGWIIIHDRRGILRDIRDGLVKLSQRILGPCTIVQGALPSILLRT--PQEYFDGTLSVLESNAMLCYGAL 316 (401)
T ss_pred cccCCCccceEEEEEecCcchhHHHHHHHHHHHhhccCCCCcHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998542 34444544433 4567889999999998652 25677888899999999999999
Q ss_pred HhC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHHHH
Q 019899 247 KQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIER 325 (334)
Q Consensus 247 ~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l~~ 325 (334)
+++ |+.+..|.+|+|+|++++...-. ...+..+++..+++++||.+.||..|+. ++++|++++ .+++++++++++
T Consensus 317 ~~~~~~~~~~p~~g~f~~~~~~~~~~~-~~~~~~~~~~~l~~~~gI~v~pg~~f~~--~~~iRis~~-~~~~~l~~~l~r 392 (401)
T TIGR01264 317 AAVPGLRPVMPSGAMYMMVGIEMEHFP-EFKNDVEFTERLVAEQSVFCLPGSCFEY--PGFFRVVLT-VPVVMMEEACSR 392 (401)
T ss_pred HhCCCCcccCCCeeeEEEEEecccccC-CCCCHHHHHHHHHHhCCEEEeCchhcCC--CCeEEEEEc-CCHHHHHHHHHH
Confidence 988 77777889999999998642000 0013467888877789999999998863 689999999 578899999999
Q ss_pred HHHHHHHc
Q 019899 326 IQKVAETC 333 (334)
Q Consensus 326 l~~~~~~~ 333 (334)
|.++++++
T Consensus 393 l~~~~~~~ 400 (401)
T TIGR01264 393 IQEFCERH 400 (401)
T ss_pred HHHHHhcc
Confidence 99999875
No 40
>PRK07324 transaminase; Validated
Probab=100.00 E-value=3e-45 Score=327.77 Aligned_cols=292 Identities=20% Similarity=0.276 Sum_probs=252.7
Q ss_pred CCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 14 SFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 14 ~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
++++++|++|+|+++++.+++.+++++||+|+++.|+|+.+...++ ..|.+++.+|+.+++++.+|++++++++++
T Consensus 77 ~~~~~~vi~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~-~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~--- 152 (373)
T PRK07324 77 NVKPENILQTNGATGANFLVLYALVEPGDHVISVYPTYQQLYDIPE-SLGAEVDYWQLKEENGWLPDLDELRRLVRP--- 152 (373)
T ss_pred CCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHH-HcCCEEEEEecccccCCCCCHHHHHHhCCC---
Confidence 3678999999999999999999999999999999999999998888 899999999997667788999999988865
Q ss_pred cCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEeccc
Q 019899 94 RGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLS 173 (334)
Q Consensus 94 ~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s 173 (334)
+++++++++|+||||.++|.+++++|+++|++||+++|+||+|+++.+++. ..++... .++++++.|+|
T Consensus 153 ---~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~-~~s~~~~-------~~~~I~~~s~S 221 (373)
T PRK07324 153 ---NTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGS-TPSIADL-------YEKGISTNSMS 221 (373)
T ss_pred ---CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCC-CCChhhc-------cCCEEEEecch
Confidence 789999999999999999999999999999999999999999999887543 3333332 46789999999
Q ss_pred ccCCCCCceEEEEeecCHHHHHHHHHhhcc--cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-C
Q 019899 174 KDLSLPGFRTGVIYSYNESVLAAAKKLTRF--CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-G 250 (334)
Q Consensus 174 K~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g 250 (334)
|.+|++|+|+||+++ ++++++.+.+.... .+.+.+.|.++..++... +.++.+.++.++++++.+.+.|++. +
T Consensus 222 K~~~~~G~RiG~i~~-~~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~~---~~~l~~~~~~~~~~~~~l~~~l~~~~~ 297 (373)
T PRK07324 222 KTYSLPGIRVGWIAA-NEEVIDILRKYRDYTMICAGVFDDMLASLALEHR---DAILERNRKIVRTNLAILDEWVAKEPR 297 (373)
T ss_pred hhcCCccceeEEEec-CHHHHHHHHHHhCcEEecCChHHHHHHHHHHcCH---HHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999998 88999999877653 467788888888887642 4566778888899999999999876 6
Q ss_pred CcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHHHHHHHHH
Q 019899 251 IRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKVA 330 (334)
Q Consensus 251 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l~~l~~~~ 330 (334)
+.+..|.+|+++|+.++... +..+++.++++++||.+.||..|+. ++++|++++ .+++.+++++++|++++
T Consensus 298 ~~~~~p~gg~~~~i~~~~~~------~~~~~~~~ll~~~gv~v~pg~~F~~--~~~iRis~~-~~~~~l~~~l~rl~~~l 368 (373)
T PRK07324 298 VSYVKPKAVSTSFVKLDVDM------PSEDFCLKLLKETGVLLVPGNRFDL--EGHVRIGYC-CDTETLKKGLKKLSEFL 368 (373)
T ss_pred ceEECCCceEEEEEEeCCCC------CHHHHHHHHHHhcCEEEECccccCC--CCeEEEEec-CCHHHHHHHHHHHHHHH
Confidence 77788899998888887532 3468999988889999999999974 679999998 67899999999999999
Q ss_pred HHc
Q 019899 331 ETC 333 (334)
Q Consensus 331 ~~~ 333 (334)
+++
T Consensus 369 ~~~ 371 (373)
T PRK07324 369 REF 371 (373)
T ss_pred Hhc
Confidence 875
No 41
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=1.6e-45 Score=331.63 Aligned_cols=304 Identities=21% Similarity=0.319 Sum_probs=257.4
Q ss_pred hhhhhhhhcCCCCCCCC-cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcccc
Q 019899 2 AGFMSQVLGQAVSFDPS-QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~-~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
++++.+..+ ...+++ +|++|+|+++++..++.+++++||+|+++.|+|+.+...++ ..|.+++.++++. +++.+|
T Consensus 77 a~~l~~~~~--~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~~~~-~~g~~~~~~~~~~-~~~~~d 152 (386)
T PRK09082 77 AAKTARLYG--RQYDADSEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAIE-LAGGRAVRVALQP-PDFRVD 152 (386)
T ss_pred HHHHHHHhC--CCCCCCCcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHHHHH-HcCCEEEEEecCc-ccccCC
Confidence 456665555 445555 79999999999999999999999999999999999999998 8899999999853 467899
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++.+++ +++++++++|+||||.+++.+++++|+++|++|++++|+|++|+.+.+++....++..+..
T Consensus 153 ~~~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~--- 223 (386)
T PRK09082 153 WQRFAAAISP------RTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPE--- 223 (386)
T ss_pred HHHHHHhcCc------cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcC---
Confidence 9999999875 7899999999999999999999999999999999999999999999887655555555432
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh--cccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT--RFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
..+++++++||||.+|++|+|+||+++ ++++++.+++.. ..++.+.+.|.++..++... ++++.++++.++++
T Consensus 224 -~~~~~i~~~S~SK~~~~~G~RiG~iv~-~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~ 298 (386)
T PRK09082 224 -LRERAFVVSSFGKTYHVTGWKVGYCVA-PAALSAEFRKVHQYNTFTVNTPAQLALADYLRAE---PEHYLELPAFYQAK 298 (386)
T ss_pred -ccCcEEEEeechhhccchhhhhhhhhC-CHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCC---hHHHHHHHHHHHHH
Confidence 157899999999999999999999998 789988888765 34678999999999998642 34567788899999
Q ss_pred HHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCC--CCCCeEEEEecCCCc
Q 019899 239 YDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHC--IEPGWFRCCFTSLTH 316 (334)
Q Consensus 239 ~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~~iRi~~~~~~~ 316 (334)
++.+.+.|++.++++..+++|+|+|+++|+... .+..+++..|++++||.+.||+.|+. ...+++|++++ .++
T Consensus 299 ~~~~~~~L~~~~~~~~~~~g~~~~~~~~~~~~~----~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~-~~~ 373 (386)
T PRK09082 299 RDRFRAALANSRFKLLPCEGTYFQLVDYSAISD----LDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFA-KQE 373 (386)
T ss_pred HHHHHHHHHhCCCcccCCCeeEEEEEeccccCC----CCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEec-CCH
Confidence 999999999989998889999999999985311 23468889888889999999998853 23579999999 578
Q ss_pred ccHHHHHHHHHH
Q 019899 317 EDIPLVIERIQK 328 (334)
Q Consensus 317 ~~l~~~l~~l~~ 328 (334)
+++++++++|++
T Consensus 374 ~~l~~~~~rl~~ 385 (386)
T PRK09082 374 ETLDAAAERLCQ 385 (386)
T ss_pred HHHHHHHHHHhh
Confidence 899999998875
No 42
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=5.2e-45 Score=329.91 Aligned_cols=312 Identities=27% Similarity=0.461 Sum_probs=258.4
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccH
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
++|+....+ +.+++++|++|+|+++++..++.+++++||+|+++.|+|+.+...+. ..|.+++.+++.+++++.+|+
T Consensus 83 a~~l~~~~~--~~~~~~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~ 159 (403)
T TIGR01265 83 AEYLSSDLP--GKLTADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAA-FSGLEVRLYDLLPEKDWEIDL 159 (403)
T ss_pred HHHHHhhcC--CCCCHHHEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHH-HcCCEEEEecCCcccCCccCH
Confidence 344443333 55678899999999999999999999999999999999999988888 889999999886556778999
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
+.+++++++ +++++++++|+||||.++|.+++++|+++|+++|+++|+|++|+++.+++..+.++..+.+
T Consensus 160 ~~l~~~~~~------~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~---- 229 (403)
T TIGR01265 160 DGLEALADE------KTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFAS---- 229 (403)
T ss_pred HHHHHHhCc------CccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhcc----
Confidence 999998865 7889999999999999999999999999999999999999999999987655556666544
Q ss_pred CCCcEEEEecccccCCCCCceEEEEeecCH-H-----HHHHHHHhhc-ccCCChHHHHHHHHhhCChHHHHHHHHHHHHH
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTGVIYSYNE-S-----VLAAAKKLTR-FCSISAPTQRLLISMLSDTKFIQEYLETNKRR 234 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~-~-----~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 234 (334)
..++++++||||.++++|+|+||++++++ . +.+.+..... ..+.+.+.|.++..++.... +.++.+.+++
T Consensus 230 -~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~--~~~~~~~~~~ 306 (403)
T TIGR01265 230 -IVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDTVLQGLKNLLQRILGPATIVQGALPDILENTP--QEFFDGKISV 306 (403)
T ss_pred -CCcEEEEeecccccCCCcceEEEEEEeCchhhhHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHhCh--HHHHHHHHHH
Confidence 45799999999999899999999998443 2 3444444432 35678899999999986532 5677888889
Q ss_pred HHHHHHHHHHHHHhC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC
Q 019899 235 IKKLYDSFVAGLKQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS 313 (334)
Q Consensus 235 ~~~~~~~~~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~ 313 (334)
+.++++.+.+.|+.+ |+.+..|.+|+|+|++++..... ...++.+++..+++++||.+.||..|+. ++++|++++
T Consensus 307 ~~~~~~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~-~~~~~~~~~~~l~~~~gv~v~pg~~f~~--~~~iRis~~- 382 (403)
T TIGR01265 307 LKSNAELCYEELKDIPGLVCPKPEGAMYLMVKLELELFP-EIKDDVDFCEKLVREESVICLPGSAFGL--PNWVRITIT- 382 (403)
T ss_pred HHHHHHHHHHHHhcCCCceecCCCceeEEEEeccccccC-CCCCHHHHHHHHHHhCCEEEeCccccCC--CCeEEEEec-
Confidence 999999999999887 77777889999999999754210 0113468888888889999999999863 789999999
Q ss_pred CCcccHHHHHHHHHHHHHHc
Q 019899 314 LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 314 ~~~~~l~~~l~~l~~~~~~~ 333 (334)
..++++++++++|++++++|
T Consensus 383 ~~~~~l~~~l~~l~~~~~~~ 402 (403)
T TIGR01265 383 VPESMLEEACSRIKEFCERH 402 (403)
T ss_pred CCHHHHHHHHHHHHHHHHhc
Confidence 66789999999999999876
No 43
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=5.2e-45 Score=324.18 Aligned_cols=298 Identities=24% Similarity=0.386 Sum_probs=250.4
Q ss_pred hhhhhhhhcCCCCCCCC-cEEEecCcHHHHHHHHHHhcCCC---CeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCc
Q 019899 2 AGFMSQVLGQAVSFDPS-QIVLTAGATPAVEILCFCLADHG---NALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNF 77 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~-~i~~~~g~~~~~~~~~~~l~~~g---d~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~ 77 (334)
++|+.+..+ ++++++ +|++|+|+++++..++.+++++| |+|+++.|+|+.+...++ ..|.+++.+++.+++++
T Consensus 46 a~~~~~~~g--~~~~~~~~Iiit~Gs~~ai~~~~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~ 122 (350)
T TIGR03537 46 SGWFERRFG--VKLDPDAQVLPSAGSKEAIFHFPLVFIDPEEDRRRVIFGTPGYPVYERGAL-FAGGEPTAVKLKKEDGF 122 (350)
T ss_pred HHHHHHHhC--CCCCCCCcEEEcCChHHHHHHHHHHHcCCCCCCceEEEcCCCCcchHHHHH-hcCCEEEEcccCcccCC
Confidence 556665555 778888 99999999999999999999877 699999999999999999 99999999998656678
Q ss_pred cccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhh
Q 019899 78 AFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILE 157 (334)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~ 157 (334)
++|++++++++++ +++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+.+.+++ ...++...
T Consensus 123 ~~d~~~l~~~~~~------~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~-- 193 (350)
T TIGR03537 123 LLRLEKVEKSILE------ETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGE-PPHSALEV-- 193 (350)
T ss_pred ccCHHHHHHhhhh------ccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCC-CCCchhhc--
Confidence 8999999999876 78999999999999999999999999999999999999999999887754 33333332
Q ss_pred ccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccC--CChHHHHHHHHhhCChHHHHHHHHHHHHHH
Q 019899 158 AEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCS--ISAPTQRLLISMLSDTKFIQEYLETNKRRI 235 (334)
Q Consensus 158 ~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 235 (334)
+.++++++.|+||.+|++|+|+||+++ ++++.+.++.....++ .+...|.++..++... ++..+.++++
T Consensus 194 ----~~~~~i~~~s~SK~~g~~GlRiG~~~~-~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~----~~~~~~r~~l 264 (350)
T TIGR03537 194 ----GIENVLAFHSLSKRSGMTGYRSGFVAG-DEKLISFLRKLRANFGVASPDFVQAAAKAAWSDD----NHVLERRKIF 264 (350)
T ss_pred ----CcCCEEEEeecccccCCccccceeeec-CHHHHHHHHHHHHhhccCCCHHHHHHHHHHhCCc----HHHHHHHHHH
Confidence 256899999999999999999999997 8889888887655443 3445777776666543 3456678889
Q ss_pred HHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCC
Q 019899 236 KKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLT 315 (334)
Q Consensus 236 ~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~ 315 (334)
+++++.+.+.|++.|+++..+.+|+++|+++|... ++.++++.|++ +||.+.||..|+...++++|++++ .+
T Consensus 265 ~~~~~~~~~~l~~~g~~~~~~~g~~~~~~~~~~~~------~~~~l~~~L~~-~gv~v~~g~~f~~~~~~~~Ri~~~-~~ 336 (350)
T TIGR03537 265 KRKRDLFIEFFNKVGLEYLYPDATFYLWVKVPSGI------DAKDYALRLLE-NGIVVAPGENFGSGEEGYVRVALV-PT 336 (350)
T ss_pred HHHHHHHHHHHHHCCCcccCCCeEEEEEEECCCCC------CHHHHHHHHHH-CCEEEcCchhhCCCCCCEEEEEec-CC
Confidence 99999999999999998888899999999998642 23678888665 799999999997655789999997 67
Q ss_pred cccHHHHHHHHHH
Q 019899 316 HEDIPLVIERIQK 328 (334)
Q Consensus 316 ~~~l~~~l~~l~~ 328 (334)
++++++++++|++
T Consensus 337 ~~~~~~~l~~~~~ 349 (350)
T TIGR03537 337 LEECEEALRLWER 349 (350)
T ss_pred HHHHHHHHHHHhc
Confidence 8899999998875
No 44
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=9.4e-45 Score=326.50 Aligned_cols=308 Identities=24% Similarity=0.467 Sum_probs=259.1
Q ss_pred ChhhhhhhhcCCCCCCCC-cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccc
Q 019899 1 MAGFMSQVLGQAVSFDPS-QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~-~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~ 79 (334)
+|+|+.+..+ +.++++ +|++|+|+++++.+++.+++++||+|++++|+|+.+...++ ..|++++.++.+ ++++.+
T Consensus 74 ia~~l~~~~g--~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~~~~~-~~~~~~ 149 (387)
T PRK07683 74 ACNFVKDKYD--LHYSPESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIR-LCGAKPVFIDTR-STGFRL 149 (387)
T ss_pred HHHHHHHHhC--CCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHHHH-HcCCEEEEeecC-cccCCC
Confidence 3566665555 667888 99999999999999999999999999999999999999988 899999999975 356778
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
|.+++++.+++ +++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+++.+++. ..++.+...
T Consensus 150 ~~~~l~~~~~~------~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~-- 220 (387)
T PRK07683 150 TAEALENAITE------KTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQP-HTSIAHFPE-- 220 (387)
T ss_pred CHHHHHHhcCc------CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCC-cCChhhccC--
Confidence 88999998875 789999999999999999999999999999999999999999999887543 334444321
Q ss_pred ccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc--cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 160 EVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
..+++++++|+||.+|++|+|+||+++ ++++++.+...... .+.+.+.|.++..++...+ .+.++.++++++
T Consensus 221 --~~~~vi~~~s~SK~~~~pGlRiG~i~~-~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~---~~~~~~~~~~~~ 294 (387)
T PRK07683 221 --MREKTIVINGLSKSHSMTGWRIGFLFA-PSYLAKHILKVHQYNVTCASSISQYAALEALTAGK---DDAKMMRHQYKK 294 (387)
T ss_pred --CcCCeEEEeeccccccCccceeEEEEc-CHHHHHHHHHHHHhccCCCChHHHHHHHHHHhCCh---HHHHHHHHHHHH
Confidence 157899999999999999999999998 88888888765432 3457788999998987643 345677888999
Q ss_pred HHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcc
Q 019899 238 LYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHE 317 (334)
Q Consensus 238 ~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~ 317 (334)
+++.+.+.|++.++.+..+.+|+|+|+.++... .++.+++..+++++||.+.||..|+...++++||+++ .+++
T Consensus 295 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~-~~~~ 368 (387)
T PRK07683 295 RRDYVYNRLISMGLDVEKPTGAFYLFPSIGHFT-----MSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYA-YSIE 368 (387)
T ss_pred HHHHHHHHHHHcCCcccCCCeeEEEEEecccCC-----CCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEec-CCHH
Confidence 999999999988888888999999999887521 1235788787888999999999997656789999999 5888
Q ss_pred cHHHHHHHHHHHHHHc
Q 019899 318 DIPLVIERIQKVAETC 333 (334)
Q Consensus 318 ~l~~~l~~l~~~~~~~ 333 (334)
++.+++++|.+++++.
T Consensus 369 ~~~~al~~l~~~l~~~ 384 (387)
T PRK07683 369 TLKEGLDRLEAFLQQK 384 (387)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999988653
No 45
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=8.2e-45 Score=327.86 Aligned_cols=307 Identities=21% Similarity=0.398 Sum_probs=249.9
Q ss_pred ChhhhhhhhcCCCCCCCC-cEEEecCcHHHHHHHHHHhcCCCCe--EEecCCCCCChhhhhhhccCcEEEEEeCCCCCCc
Q 019899 1 MAGFMSQVLGQAVSFDPS-QIVLTAGATPAVEILCFCLADHGNA--LLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNF 77 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~-~i~~~~g~~~~~~~~~~~l~~~gd~--vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~ 77 (334)
+|+|+.++.+...+++++ +|++|+|+++++..++.+++++||. |++++|+|+.+...++ ..|.+++.+++.+++++
T Consensus 73 ia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~-~~g~~~~~v~~~~~~~~ 151 (393)
T TIGR03538 73 IARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAAL-LAGAEPYFLNCTAENGF 151 (393)
T ss_pred HHHHHHHhhCCcccCCCCceEEECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHH-hcCCeEEEeeccccCCC
Confidence 356776655522236775 7999999999999999999999986 9999999999999888 89999999999766778
Q ss_pred cccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCC-Ccchhhhhh
Q 019899 78 AFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNE-EFVSMAEIL 156 (334)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~ 156 (334)
.+|++++++++.+ +++++++++|+||||.+++.+++++|+++|++|+++||+||+|..+.+.+. ...+.....
T Consensus 152 ~~d~~~l~~~~~~------~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~ 225 (393)
T TIGR03538 152 LPDFDAVPESVWR------RCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAA 225 (393)
T ss_pred CCCHHHHHHHHhh------cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhc
Confidence 8999999998875 789999999999999999999999999999999999999999999887542 222222111
Q ss_pred hccc-cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCChHHHHHHHHHHHH
Q 019899 157 EAEE-VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDTKFIQEYLETNKR 233 (334)
Q Consensus 157 ~~~~-~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 233 (334)
...+ ...++++++.||||.++++|+|+||+++ ++++++.+.+... .++.+++.|.++...+.. ++++.+.++
T Consensus 226 ~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~-~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~----~~~~~~~~~ 300 (393)
T TIGR03538 226 AQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAG-DAEILKAFLRYRTYHGCAMPIPTQLASIAAWND----EQHVRENRA 300 (393)
T ss_pred ccccccccccEEEEecchhhcCCcccceEEEec-CHHHHHHHHHHHHhhccCcCHHHHHHHHHHhcC----hHHHHHHHH
Confidence 1000 1257899999999999899999999998 7888888876654 346778888887777754 345677888
Q ss_pred HHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCC------CCCCeE
Q 019899 234 RIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHC------IEPGWF 307 (334)
Q Consensus 234 ~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~------~~~~~i 307 (334)
.++++++.+.+.|++. +.+..|.+|+|+|+++|. +..++...+++++||.+.||+.|+. ...+++
T Consensus 301 ~~~~~~~~~~~~L~~~-~~~~~p~gg~f~~~~~~~--------~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~ 371 (393)
T TIGR03538 301 LYREKFAAVLEILGQV-LDLELPDAGFYLWPKVPG--------DDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRV 371 (393)
T ss_pred HHHHHHHHHHHHHHhh-CcccCCCeeEEEEEECCC--------CHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEE
Confidence 8999999999999875 556678999999999981 2357888878889999999998853 135799
Q ss_pred EEEecCCCcccHHHHHHHHHHH
Q 019899 308 RCCFTSLTHEDIPLVIERIQKV 329 (334)
Q Consensus 308 Ri~~~~~~~~~l~~~l~~l~~~ 329 (334)
||+++ .+++++++++++|+++
T Consensus 372 Ris~~-~~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 372 RIALV-APLEECVEAAERIRSF 392 (393)
T ss_pred EEEec-CCHHHHHHHHHHHHHh
Confidence 99998 5789999999999875
No 46
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=5.9e-45 Score=328.40 Aligned_cols=308 Identities=23% Similarity=0.426 Sum_probs=256.1
Q ss_pred ChhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcccc
Q 019899 1 MAGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
+|+|+.+..+ +.+++++|++|+|+++++..++.+++++||+|++++|+|+++...++ ..|.+++.++++.++++.+|
T Consensus 76 ia~~~~~~~~--~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~~~~~ 152 (388)
T PRK07337 76 IAAWYARRFG--LDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFVA-AAEGRPVLVPSGPAERFQLT 152 (388)
T ss_pred HHHHHHHHhC--CCCChHhEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHH-HcCCEEEEeecCCccCCcCC
Confidence 3566666555 66789999999999999999999999999999999999999998888 88999999998655678999
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++.+++ +++++++++|+||||.+++.+++++|+++|+++++++|+||+|.++.+.+. ..+...+
T Consensus 153 ~~~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~----- 220 (388)
T PRK07337 153 AADVEAAWGE------RTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAA-PVSALSL----- 220 (388)
T ss_pred HHHHHhhcCc------cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCC-CcChhhc-----
Confidence 9999998875 788999999999999999999999999999999999999999999887543 2232222
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc--cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
.++++++.|+||.+|++|+|+||+++ ++++++.+...... .+.+++.|.++..++.... .++..+.++.++++
T Consensus 221 --~~~vi~~~S~SK~~~~~G~RiG~~~~-~~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~--~~~~~~~~~~~~~~ 295 (388)
T PRK07337 221 --GDDVITINSFSKYFNMTGWRLGWLVV-PEALVGTFEKLAQNLFICASALAQHAALACFEPDT--LAIYERRRAEFKRR 295 (388)
T ss_pred --cCCEEEEEechhhcCCchhheeeeec-CHHHHHHHHHHHHHhccCCChHHHHHHHHHhccCc--hHHHHHHHHHHHHH
Confidence 46788999999999999999999998 78888888776543 3578889999888886533 23346778899999
Q ss_pred HHHHHHHHHhCCCcc-cCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC-CCCeEEEEecCCCc
Q 019899 239 YDSFVAGLKQLGIRC-SESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI-EPGWFRCCFTSLTH 316 (334)
Q Consensus 239 ~~~~~~~l~~~g~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~-~~~~iRi~~~~~~~ 316 (334)
++.+.+.|++.++.+ ..|.+|+|+|++++..... ...++.+++..+++++||.+.||..|+.. .++++|++++ .++
T Consensus 296 r~~~~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~-~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~-~~~ 373 (388)
T PRK07337 296 RDFIVPALESLGFKVPVMPDGAFYVYADCRGVAHP-AAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYA-TSM 373 (388)
T ss_pred HHHHHHHHHhcCCccccCCCeeEEEEEecccccCC-CCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEec-CCH
Confidence 999999999988765 4678999999999853110 11245678888888899999999999753 3579999999 578
Q ss_pred ccHHHHHHHHHHHH
Q 019899 317 EDIPLVIERIQKVA 330 (334)
Q Consensus 317 ~~l~~~l~~l~~~~ 330 (334)
+++.+++++|.+++
T Consensus 374 ~~l~~~l~rl~~~l 387 (388)
T PRK07337 374 SRLEEAVARLGKLF 387 (388)
T ss_pred HHHHHHHHHHHHHh
Confidence 89999999998865
No 47
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=1.4e-44 Score=325.83 Aligned_cols=309 Identities=22% Similarity=0.379 Sum_probs=257.3
Q ss_pred hhhhhhhhcCCCCCCCC-cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCC-CCccc
Q 019899 2 AGFMSQVLGQAVSFDPS-QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRST-DNFAF 79 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~-~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~-~~~~~ 79 (334)
++++.+..+ +.++++ +|++|+|+++++..++.+++++||+|+++.|+|+.+...++ ..|.+++.+++.++ +++.+
T Consensus 71 a~~~~~~~g--~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~~~~~ 147 (387)
T PRK07777 71 AAQRRRRYG--LEYDPDTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAAVIA-MAGAHRVPVPLVPDGRGFAL 147 (387)
T ss_pred HHHHHHHhC--CCCCCCCcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHH-HCCCEEEEeecCCccCCCcC
Confidence 445555555 556676 79999999999999999999999999999999999998888 88999999998654 46789
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
|++++++++++ +++++++++|+||||.+++.+++++|+++|+++++++|+||+|+++.|.+..+.++..+.+
T Consensus 148 d~~~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~-- 219 (387)
T PRK07777 148 DLDALRAAVTP------RTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPG-- 219 (387)
T ss_pred CHHHHHHhcCc------ccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCC--
Confidence 99999998875 7899999999999999999999999999999999999999999998886554444444322
Q ss_pred ccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 160 EVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
+ .++++++.|+||.+|++|+|+||+++ ++++++.+..... .+..+++.|.++..++... +.++.+.++.+++
T Consensus 220 -~-~~~~i~~~S~SK~~g~~GlRiG~~~~-~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~ 293 (387)
T PRK07777 220 -M-RERTVTISSAAKTFNVTGWKIGWACG-PAPLIAAVRAAKQYLTYVGGAPFQPAVAHALDHE---DAWVAALRDSLQA 293 (387)
T ss_pred -C-cCcEEEEeechhhccCcCceeEEEec-CHHHHHHHHHHHhhcccCCCCHHHHHHHHHHhCC---cHHHHHHHHHHHH
Confidence 1 56899999999999999999999998 7888888876554 3456778888888888653 3556778889999
Q ss_pred HHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC---CCCeEEEEecCC
Q 019899 238 LYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI---EPGWFRCCFTSL 314 (334)
Q Consensus 238 ~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~---~~~~iRi~~~~~ 314 (334)
+++.+.+.|++.++++..+++++++|++++.... .++.++++.|++++||.+.||..|+.. .++++|++++ .
T Consensus 294 ~~~~l~~~L~~~~~~~~~~~g~~~~~~~~~~~~~----~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~-~ 368 (387)
T PRK07777 294 KRDRLAAGLAEAGFEVHDSAGTYFLCADPRPLGY----DDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFC-K 368 (387)
T ss_pred HHHHHHHHHHhCCCCccCCCcceEEEecccccCC----CCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEec-C
Confidence 9999999999989888888999999999764211 134689999888899999999988642 2468999998 5
Q ss_pred CcccHHHHHHHHHHHHHH
Q 019899 315 THEDIPLVIERIQKVAET 332 (334)
Q Consensus 315 ~~~~l~~~l~~l~~~~~~ 332 (334)
+++++++++++|+++..+
T Consensus 369 ~~~~l~~~l~~l~~~~~~ 386 (387)
T PRK07777 369 RDDTLDEAIRRLRALRGR 386 (387)
T ss_pred CHHHHHHHHHHHHHHhcC
Confidence 889999999999987654
No 48
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=1.9e-44 Score=326.53 Aligned_cols=305 Identities=21% Similarity=0.371 Sum_probs=248.7
Q ss_pred CCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 14 SFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 14 ~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
++++++|++|+|+++++..++.+++++||+|++++|+|+.+...++ ..|.+++.++++.++++.+|++++++++++
T Consensus 92 ~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~-~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~--- 167 (404)
T PRK09265 92 DVDVDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVS-LSGGKPVHYLCDEEAGWFPDLDDIRSKITP--- 167 (404)
T ss_pred CCCcccEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHHH-HcCCEEEEEecccccCCCCCHHHHHHhccc---
Confidence 6889999999999999999999999999999999999999999888 889999988875556678999999998865
Q ss_pred cCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEeccc
Q 019899 94 RGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLS 173 (334)
Q Consensus 94 ~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s 173 (334)
+++++++++|+||||.++|.+++++|+++|+++|++||+||+|+++.|++....++..+.+ ..++++++|||
T Consensus 168 ---~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-----~~~vi~~~S~S 239 (404)
T PRK09265 168 ---RTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAP-----DLLCVTFNGLS 239 (404)
T ss_pred ---cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCC-----CceEEEEecch
Confidence 7899999999999999999999999999999999999999999999887655556655543 34789999999
Q ss_pred ccCCCCCceEEEEeec-CHH----HHHHHHHhh-cccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019899 174 KDLSLPGFRTGVIYSY-NES----VLAAAKKLT-RFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLK 247 (334)
Q Consensus 174 K~~~~~g~r~g~i~~~-~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 247 (334)
|.++++|+|+||++++ ++. +++.+.... ..++.|.++|.++..++...+...++.. ..+++.++++.+.+.|+
T Consensus 240 K~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~-~~~~~~~~r~~~~~~L~ 318 (404)
T PRK09265 240 KAYRVAGFRVGWMVLSGPKKHAKGYIEGLDMLASMRLCANVPAQHAIQTALGGYQSINELIL-PGGRLYEQRDRAWELLN 318 (404)
T ss_pred hhccCcccceEEEEEeCchHHHHHHHHHHHHHhccccCCCcHHHHHHHHHhcCchhHHHHHH-HHHHHHHHHHHHHHHHh
Confidence 9999999999999963 443 334443322 2356788999999999876443333333 23456777889999998
Q ss_pred hC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHHHHH
Q 019899 248 QL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERI 326 (334)
Q Consensus 248 ~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l~~l 326 (334)
++ ++++..|.+|+|+|++++..... ..+..+...++++++||.+.||..|+...++++|++++ .+++++++++++|
T Consensus 319 ~~~~~~~~~p~~g~~l~~~~~~~~~~--~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~-~~~e~l~~~l~rl 395 (404)
T PRK09265 319 AIPGVSCVKPKGALYAFPKLDPKVYP--IHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTL-PRVDDLEEAIGRI 395 (404)
T ss_pred cCCCCcccCCCcceEEEEEecccccC--CCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeC-CCHHHHHHHHHHH
Confidence 87 78888899999999999753210 01234555666888999999999997656789999997 7899999999999
Q ss_pred HHHHHHcC
Q 019899 327 QKVAETCK 334 (334)
Q Consensus 327 ~~~~~~~~ 334 (334)
++++++++
T Consensus 396 ~~~l~~~~ 403 (404)
T PRK09265 396 GRFLSGYR 403 (404)
T ss_pred HHHHHHhc
Confidence 99998753
No 49
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-46 Score=316.61 Aligned_cols=312 Identities=20% Similarity=0.361 Sum_probs=264.0
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCC------CCC
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCR------STD 75 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~------~~~ 75 (334)
++.+++..+. ...+.++|++|+|+.+++..+++.++++||+|++.+|.|.+|..... ..|..++.++.. ..+
T Consensus 79 ~k~~se~~~~-~~~~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~~~~-maG~tpv~v~~~~~~g~~~s~ 156 (420)
T KOG0257|consen 79 AKAYSEFYGG-LLDPDDEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYIPQVV-MAGGTPVFVPLKPKEGNVSSS 156 (420)
T ss_pred HHHHHHHhcc-ccCCcccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhhhHHh-hcCCcceeeccccccccccCc
Confidence 4455554442 22345579999999999999999999999999999999999999999 999999999987 567
Q ss_pred CccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhh
Q 019899 76 NFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEI 155 (334)
Q Consensus 76 ~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~ 155 (334)
+|.+|.++++.++++ ++|+|++++|+||||.+++.++|++|+++|++||++||.||+|.-+.|++..+..+..+
T Consensus 157 ~~~~D~~~le~~~t~------kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~asl 230 (420)
T KOG0257|consen 157 DWTLDPEELESKITE------KTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASL 230 (420)
T ss_pred cccCChHHHHhhccC------CccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecC
Confidence 899999999999997 89999999999999999999999999999999999999999999999998877777777
Q ss_pred hhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCChHHHH-----HHH
Q 019899 156 LEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDTKFIQ-----EYL 228 (334)
Q Consensus 156 ~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~-----~~~ 228 (334)
. +| +.+++.++|++|++|+.|+|+||+++ ++.+...++...+ .+..+++.|.+.+.++.....+. .+.
T Consensus 231 P---gm-~ertitvgS~gKtf~~TGWrlGW~ig-p~~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~ 305 (420)
T KOG0257|consen 231 P---GM-YERTITVGSFGKTFGVTGWRLGWAIG-PKHLYSALFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFI 305 (420)
T ss_pred C---ch-hheEEEeccccceeeeeeeeeeeeec-hHHhhhhHHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHH
Confidence 4 34 89999999999999999999999998 8888887776543 46788899988888886543111 344
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCC------CChhhHHHHHHHHHHhcCeEEcCCCCcCCC
Q 019899 229 ETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPS------YSEKGELELWDKLLNIAKINVTPGSACHCI 302 (334)
Q Consensus 229 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~------~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~ 302 (334)
..+.+.++++++.+.+.|++.|+++..|++++|+|++++..... ...-++..+..+++++.|+.+.|++.|+..
T Consensus 306 ~~~~~~y~~krdil~k~L~~lg~~v~~p~gayyl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~ 385 (420)
T KOG0257|consen 306 TELVKEYKEKRDILAKALEELGLKVTGPEGAYYLWADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSR 385 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCccccCCCceEEEEeccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCc
Confidence 55889999999999999999999999999999999999822111 111244568899999999999999999875
Q ss_pred C-----CCeEEEEecCCCcccHHHHHHHHH
Q 019899 303 E-----PGWFRCCFTSLTHEDIPLVIERIQ 327 (334)
Q Consensus 303 ~-----~~~iRi~~~~~~~~~l~~~l~~l~ 327 (334)
+ .+.+|++++ .+++-++.+.++|+
T Consensus 386 ~~~~~~~~~~r~~~~-k~~~~L~~a~e~l~ 414 (420)
T KOG0257|consen 386 EHIKVAERLVRFCFC-KADETLRKAIERLK 414 (420)
T ss_pred hhhHHHHHHHHHHHH-hhHHHHHHHHHHHh
Confidence 3 246788887 78888999999888
No 50
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=6.8e-45 Score=329.76 Aligned_cols=299 Identities=21% Similarity=0.297 Sum_probs=242.9
Q ss_pred ChhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcE-----------EEEE
Q 019899 1 MAGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVE-----------LIPV 69 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~-----------v~~v 69 (334)
+|+|+.+..+ +++++++|++|+|+++++..+. .++++||+|++++|+|+.+...++ ..|.+ ++.+
T Consensus 85 ia~~~~~~~g--~~~~~~~I~it~Ga~~al~~l~-~~~~~gd~V~v~~P~Y~~~~~~~~-~~g~~~~~~~~~~~~~~~~v 160 (409)
T PRK07590 85 IAENDYQARG--CDISADEIFISDGAKCDTGNIL-DIFGPDNTIAVTDPVYPVYVDTNV-MAGRTGEANEDGRYSGIVYL 160 (409)
T ss_pred HHHHHHHhcC--CcCChhhEEECCCHHHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHH-HcCCcccccccccccceeEe
Confidence 3556655555 7889999999999999999865 556899999999999999999998 88886 8889
Q ss_pred eCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCc
Q 019899 70 HCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEF 149 (334)
Q Consensus 70 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~ 149 (334)
+++.++++..+.+. .+++++++++|+||||.+++.+++++|+++|++|+++||+||+|+++.+.+..+
T Consensus 161 ~~~~~~~~~~d~~~------------~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~ 228 (409)
T PRK07590 161 PCTAENNFVPELPE------------EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLP 228 (409)
T ss_pred ecccccCCcccCcc------------cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCC
Confidence 88544555555331 278999999999999999999999999999999999999999999988765434
Q ss_pred chhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHH------------HH-hhcc-cCCChHHHHHHH
Q 019899 150 VSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAA------------KK-LTRF-CSISAPTQRLLI 215 (334)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~------------~~-~~~~-~~~~~~~~~~~~ 215 (334)
.++..+.. ..+++++++||||.+|++|+|+||+++ ++++++.+ .. .... .+.+.+.|.++.
T Consensus 229 ~~~~~~~~----~~~~vi~~~SfSK~~~~pGlRiG~~i~-~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~ 303 (409)
T PRK07590 229 HSIYEIEG----ARECAIEFRSFSKTAGFTGTRCAYTVV-PKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAE 303 (409)
T ss_pred cchhhCCC----cccceEEEecCccccCCcCceeEEEEc-CHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHH
Confidence 44554432 145789999999999999999999999 77777621 11 1222 357889999998
Q ss_pred HhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcC
Q 019899 216 SMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTP 295 (334)
Q Consensus 216 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~ 295 (334)
.++.... ..++.+.++.++++++.+.+.|++.++.+..+.+++|+|++++...+ +.++...+++++||.+.|
T Consensus 304 ~~l~~~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~g~~f~wi~~~~~~~------~~~~~~~l~~~~gv~v~p 375 (409)
T PRK07590 304 AVYSPEG--KAQIKELIDYYMENAKIIREGLESAGFEVYGGVNAPYIWVKTPDGMS------SWDFFDKLLQEANVVGTP 375 (409)
T ss_pred HHhcCCc--HHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCcceEEEEECCCCCC------HHHHHHHHHHHCCEEEeC
Confidence 8886432 35677888999999999999999988888888899999999986432 357888888889999999
Q ss_pred CCCcCCCCCCeEEEEecCCCcccHHHHHHHHHHH
Q 019899 296 GSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKV 329 (334)
Q Consensus 296 g~~~~~~~~~~iRi~~~~~~~~~l~~~l~~l~~~ 329 (334)
|..|+...++++|+++. .+++++++++++|+++
T Consensus 376 g~~f~~~~~~~iRi~~~-~~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 376 GSGFGPSGEGYFRLSAF-GSRENVLEAMERIKKA 408 (409)
T ss_pred hhHhCCCCCCEEEEEcc-CCHHHHHHHHHHHHhh
Confidence 99997655689999975 5889999999999875
No 51
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-44 Score=300.52 Aligned_cols=313 Identities=23% Similarity=0.397 Sum_probs=278.3
Q ss_pred ChhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcccc
Q 019899 1 MAGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
+|+|+.+.+. ..+++++|++|+|.++|+++++.+|.++|..||+|.|.|+-|...+. ..|.+|+++++-++.+|.+|
T Consensus 112 VAeYl~~~l~--~kl~a~DV~ltsGC~qAIe~~i~~LA~p~aNILlPrPGfp~Y~~~a~-~~~lEVR~ydlLPe~~weID 188 (447)
T KOG0259|consen 112 VAEYLNRDLP--NKLTADDVVLTSGCSQAIELAISSLANPGANILLPRPGFPLYDTRAI-YSGLEVRYYDLLPEKDWEID 188 (447)
T ss_pred HHHHhhcCCC--CccCcCceEEeccchHHHHHHHHHhcCCCCceecCCCCCchHHHhhh-hcCceeEeecccCcccceec
Confidence 4778777776 56789999999999999999999999999999999999999988888 89999999999889999999
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++.++..+++ ++.+++++||+||.|.+|+.+-|++|++.|+++|+.||.||+|+.+.|++.++.++..+..
T Consensus 189 L~~veal~DE------NT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fss--- 259 (447)
T KOG0259|consen 189 LDGVEALADE------NTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSS--- 259 (447)
T ss_pred hHHHHHhhcc------CeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccc---
Confidence 9999999998 8999999999999999999999999999999999999999999999999999999999887
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCH-------HHHHHHHHhhc-ccCCChHHHHHHHHhhCChHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNE-------SVLAAAKKLTR-FCSISAPTQRLLISMLSDTKFIQEYLETNK 232 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~-------~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 232 (334)
..-++.+++.||.|=.||+|+||++..++ .+.+.+..+.. ..++++..|.|+-..|.... ++++....
T Consensus 260 --iVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~q~~~~~~~~~~~p~TiiQ~AlP~IL~kTp--~efF~k~~ 335 (447)
T KOG0259|consen 260 --IVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVVQGIKNFLDIIPGPATIIQGALPDILEKTP--EEFFDKKL 335 (447)
T ss_pred --cCceEeecccccccccCCceeeeEEEecccccccchHHHHHHHHHHhccCCccHhHHHHhHHHHHhCh--HHHHHHHH
Confidence 77889999999999999999999987444 34566665543 35678899999999997654 67788899
Q ss_pred HHHHHHHHHHHHHHHhC-CCc-ccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEE
Q 019899 233 RRIKKLYDSFVAGLKQL-GIR-CSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCC 310 (334)
Q Consensus 233 ~~~~~~~~~~~~~l~~~-g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~ 310 (334)
..++.+.+...+.|++. ++. ...|++-+|+|++++-..- ...+++.+++.+|.+|..+.+.||..|+. ++|+|++
T Consensus 336 ~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~s~~-~~~~dD~dFc~kL~~Eesv~~LPG~af~~--~nw~Ri~ 412 (447)
T KOG0259|consen 336 SFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNLSLF-PDIEDDVDFCQKLAREESVICLPGQAFGL--KNWLRIV 412 (447)
T ss_pred HHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEeccchhhh-ccccccHHHHHHHhhhcceEEeccccccC--CCeEEEE
Confidence 99999999999999998 777 4589999999998764311 11246689999999999999999999986 8999999
Q ss_pred ecCCCcccHHHHHHHHHHHHHHc
Q 019899 311 FTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 311 ~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
++ ...+.++++.++|+++..||
T Consensus 413 i~-~~~~~leea~~Rik~Fc~RH 434 (447)
T KOG0259|consen 413 IT-VEEEMLEEAFSRIKEFCDRH 434 (447)
T ss_pred Ec-cChHHHHHHHHHHHHHHHhh
Confidence 99 88899999999999999987
No 52
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=1.2e-44 Score=330.38 Aligned_cols=287 Identities=20% Similarity=0.231 Sum_probs=245.4
Q ss_pred CCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcC
Q 019899 16 DPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRG 95 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~ 95 (334)
.+++|++|+|+++++..++.+++++||.|++++|+|+.+...++ ..|++++.+|+++ ..+|++++++++++
T Consensus 140 ~~~~Iiit~G~~~al~~~~~~l~~pgd~Vlv~~P~y~~~~~~~~-~~g~~~~~v~~~~---~g~~~~~l~~~~~~----- 210 (431)
T PRK15481 140 VAFEIDLTSGAIDAIERLLCAHLLPGDSVAVEDPCFLSSINMLR-YAGFSASPVSVDA---EGMQPEKLERALAQ----- 210 (431)
T ss_pred CcCeEEEecCcHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHH-HcCCeEEeeccCC---CCCCHHHHHHHHhc-----
Confidence 35699999999999999999999999999999999999999999 9999999999842 25899999999875
Q ss_pred CceeEEEEe-CCCCCcccCCCHHHHHHHHHHHHhc-CcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEeccc
Q 019899 96 VKVRGILIC-NPANPVGNIIPRETLYELLDFAREK-NIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLS 173 (334)
Q Consensus 96 ~~~~~i~~~-~p~nptG~~~~~~~l~~i~~~~~~~-~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s 173 (334)
++++++++ +|+||||.+++.+++++|.++|+++ +++||+||+|.++.+.+. .+.... +.+++++++|||
T Consensus 211 -~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~--~~~~~~------~~~~vi~~~SfS 281 (431)
T PRK15481 211 -GARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPY--HSVIPQ------TTQRWALIRSVS 281 (431)
T ss_pred -CCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCC--CCCCcC------CCCCEEEEeeec
Confidence 68888887 9999999999999999999999999 999999999999876432 121111 256899999999
Q ss_pred ccCCCCCceEEEEeecCHHHHHHHHHhhcc--cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 019899 174 KDLSLPGFRTGVIYSYNESVLAAAKKLTRF--CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGI 251 (334)
Q Consensus 174 K~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 251 (334)
|.++ +|+|+||+++ ++++++.+...... ++.|.+.|.++..++.+.++ .+++.+.++.++++++.+.+.|++.++
T Consensus 282 K~~~-~GlRiG~~i~-~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~-~~~l~~~~~~~~~~r~~~~~~L~~~~~ 358 (431)
T PRK15481 282 KALG-PDLRLAFVAS-DSATSARLRLRLNSGTQWVSHLLQDLVYACLTDPEY-QARLAQARLFYAQRRQKLARALQQYGI 358 (431)
T ss_pred cccC-CCceeEEEeC-CHHHHHHHHHHHhccccCCCHHHHHHHHHHHhCccH-HHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999 9999999998 88888888765433 45789999999999988654 567788999999999999999999888
Q ss_pred cccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC-CCCeEEEEecCCCcccHHHHHHHHHHHH
Q 019899 252 RCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI-EPGWFRCCFTSLTHEDIPLVIERIQKVA 330 (334)
Q Consensus 252 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~-~~~~iRi~~~~~~~~~l~~~l~~l~~~~ 330 (334)
.+..|.+|+|+|++++. +..++...|. ++||.+.||..|+.. ..+++|++++..+++++++++++|++++
T Consensus 359 ~~~~p~gg~f~~~~l~~--------~~~~~~~~l~-~~gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~ 429 (431)
T PRK15481 359 AIPSPGDGLNLWLPLDT--------DSQATALTLA-KSGWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQAL 429 (431)
T ss_pred ccccCCCeEEEEEECCC--------CHHHHHHHHH-HCCcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHh
Confidence 87789999999999974 1357777754 589999999998653 2468999999778999999999999987
Q ss_pred HH
Q 019899 331 ET 332 (334)
Q Consensus 331 ~~ 332 (334)
.+
T Consensus 430 ~~ 431 (431)
T PRK15481 430 NR 431 (431)
T ss_pred cC
Confidence 53
No 53
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.5e-44 Score=324.25 Aligned_cols=313 Identities=27% Similarity=0.504 Sum_probs=264.5
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccH
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
|+|+.+..+ .++++++|++|+|+++++..++.+++++||+|++++|+|..+...++ ..|.+++.++.+.++++.+|+
T Consensus 78 a~~~~~~~~--~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~ 154 (393)
T PRK05764 78 AAKLKRDNG--LDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVK-LAGGVPVFVPTGEENGFKLTV 154 (393)
T ss_pred HHHHHHHhC--CCCCHHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHH-HcCCEEEEEecCcccCCcCCH
Confidence 556655545 56788999999999999999999999999999999999999998888 899999999986556788999
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
+.+++++++ +++++++++|+||||.++|.+++++|+++|++|++++++|++|+.+.+++..+.++.++.. +
T Consensus 155 ~~l~~~l~~------~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~--~- 225 (393)
T PRK05764 155 EQLEAAITP------KTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSP--E- 225 (393)
T ss_pred HHHHHhhCc------cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCC--C-
Confidence 999998865 7889999999999999999999999999999999999999999998886554445555422 1
Q ss_pred CCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHH
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLY 239 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (334)
..+++++++|+||.++++|+|+||+++ ++++.+.+..... ..+.+++.|.++..++... .+++.+.++.+++++
T Consensus 226 ~~~~~i~~~s~SK~~~~~G~RiG~i~~-~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~ 301 (393)
T PRK05764 226 LRDRTITVNGFSKAYAMTGWRLGYAAG-PKELIKAMSKLQSHSTSNPTSIAQYAAVAALNGP---QDEVEEMRQAFEERR 301 (393)
T ss_pred CcCCEEEEecCcccccCccceeEEEec-CHHHHHHHHHHHhhcccCCChHHHHHHHHHHcCC---hHHHHHHHHHHHHHH
Confidence 156899999999999999999999998 8899888876654 3467889999988888631 355677888899999
Q ss_pred HHHHHHHHhC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCccc
Q 019899 240 DSFVAGLKQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHED 318 (334)
Q Consensus 240 ~~~~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~ 318 (334)
+.+.+.|+++ |+.+..+.+++++|++++...... ..++.++...+++++||.+.||..|+. ++++|++++ .++++
T Consensus 302 ~~l~~~L~~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~f~~--~~~vRis~~-~~~~~ 377 (393)
T PRK05764 302 DLMVDGLNEIPGLECPKPEGAFYVFPNVSKLLGKS-ITDSLEFAEALLEEAGVAVVPGIAFGA--PGYVRLSYA-TSLED 377 (393)
T ss_pred HHHHHHHhhCCCCcccCCCcceEEEEecccccccc-cCCHHHHHHHHHHhCCEEEccccccCC--CCEEEEEec-CCHHH
Confidence 9999999998 888888899999999998643211 113468888888889999999998865 789999998 58999
Q ss_pred HHHHHHHHHHHHHHcC
Q 019899 319 IPLVIERIQKVAETCK 334 (334)
Q Consensus 319 l~~~l~~l~~~~~~~~ 334 (334)
+++++++|.+++++++
T Consensus 378 ~~~~i~~l~~~~~~~~ 393 (393)
T PRK05764 378 LEEGLERIERFLESLK 393 (393)
T ss_pred HHHHHHHHHHHHHhhC
Confidence 9999999999998875
No 54
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=2.7e-44 Score=325.06 Aligned_cols=308 Identities=25% Similarity=0.378 Sum_probs=253.0
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccH
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
++|+.+..+ +++++++|++|+|+++++..++.+++++||.|++++|+|+.+...++ ..|..++.++..+++++.+|+
T Consensus 80 a~~~~~~~g--~~~~~~~i~it~G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~v~~~~~~~~~~~~d~ 156 (398)
T PRK08363 80 VKREKRKNG--VDITPDDVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVK-FYGGVPVEYRTIEEEGWQPDI 156 (398)
T ss_pred HHHHHHhcC--CCCChhhEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHH-HcCCEEEEeccccccCCcCCH
Confidence 455555445 67899999999999999999999999999999999999999999888 889888888433345678999
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
+++++++++ +++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+++.|.+. ..+...+..
T Consensus 157 ~~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~-~~~~~~~~~---- 225 (398)
T PRK08363 157 DDIRKKITE------KTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGK-HVSPGSLTK---- 225 (398)
T ss_pred HHHHhhCCc------ceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCc-ccCHHHcCc----
Confidence 999998865 789999999999999999999999999999999999999999999887653 334444433
Q ss_pred CCCcEEEEecccccCCCCCceEEEEee-cCHHHHHHHHHhh-----cccCCChHHHHHHHHhhCChHHHHHHHHHHHHHH
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTGVIYS-YNESVLAAAKKLT-----RFCSISAPTQRLLISMLSDTKFIQEYLETNKRRI 235 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g~i~~-~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 235 (334)
..+++++.||||.++++|+|+||+++ .++++++.+.... ..++.+.+.|.++..++... .+++.+.++++
T Consensus 226 -~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~---~~~l~~~~~~~ 301 (398)
T PRK08363 226 -DVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTGP---MDYLEEYMKKL 301 (398)
T ss_pred -CCcEEEEecchhccCCccceEEEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhCC---hHHHHHHHHHH
Confidence 46799999999999899999999997 3555555554321 13567889999999888652 45567778889
Q ss_pred HHHHHHHHHHHHhC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCC
Q 019899 236 KKLYDSFVAGLKQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSL 314 (334)
Q Consensus 236 ~~~~~~~~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~ 314 (334)
+++++.+.+.|+++ ++.+..|.+|+++|++++.... .+..+++..+++++||.+.||..|+...++++|++++ .
T Consensus 302 ~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~~~~----~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~-~ 376 (398)
T PRK08363 302 KERRDYIYKRLNEIPGISTTKPQGAFYIFPRIEEGPW----KDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFL-P 376 (398)
T ss_pred HHHHHHHHHHHhcCCCCEecCCCeEEEEEEEeccCCC----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec-C
Confidence 99999999999887 7787789999999998876211 1235677777788999999999997655689999998 6
Q ss_pred CcccHHHHHHHHHHHHHH
Q 019899 315 THEDIPLVIERIQKVAET 332 (334)
Q Consensus 315 ~~~~l~~~l~~l~~~~~~ 332 (334)
+++++++++++|++++++
T Consensus 377 ~~~~l~~~l~~l~~~~~~ 394 (398)
T PRK08363 377 PVEILEEAMDRFEEFMRE 394 (398)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 789999999999998865
No 55
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=3.3e-44 Score=323.95 Aligned_cols=311 Identities=23% Similarity=0.354 Sum_probs=258.8
Q ss_pred ChhhhhhhhcCCCCCCCC-cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccc
Q 019899 1 MAGFMSQVLGQAVSFDPS-QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~-~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~ 79 (334)
+++|+.+..+ +.++++ +|++|+|+++++..++..++++||+|++++|+|+.+...++ ..|.+++.+++++++ .
T Consensus 76 ia~~~~~~~g--~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~-~~g~~~~~v~~~~~~---~ 149 (395)
T PRK08175 76 ISRWYQDRYD--VDIDPESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAV-IAGAQVRSVPLVEGV---D 149 (395)
T ss_pred HHHHHHHHhC--CCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHH-HcCCeEEEEecccCC---C
Confidence 3566666555 667777 79999999999999999999999999999999999988888 899999999985433 3
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
..+++++++++. ..+++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+++.+++....++..+..
T Consensus 150 ~~~~l~~~l~~~---~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~-- 224 (395)
T PRK08175 150 FFNELERAIRES---YPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPG-- 224 (395)
T ss_pred cHHHHHHHHhhc---cCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCC--
Confidence 478888877642 236889999999999999999999999999999999999999999999886655555554432
Q ss_pred ccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 160 EVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
..++++++.||||.+|++|+|+||+++ ++++++.+.+... .++.+++.|.++..++... +.++.++++.+++
T Consensus 225 --~~~~~i~~~S~SK~~g~pGlRiG~~~~-~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~ 298 (395)
T PRK08175 225 --AKDVAVEFFTLSKSYNMAGWRIGFMVG-NPELVSALARIKSYHDYGTFTPLQVAAIAALEGD---QQCVRDIAEQYKR 298 (395)
T ss_pred --cccCEEEEeeccccccCcchhheeeeC-CHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCc---HHHHHHHHHHHHH
Confidence 146788999999999999999999998 8899998887654 3566778888888888642 4567788899999
Q ss_pred HHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcc
Q 019899 238 LYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHE 317 (334)
Q Consensus 238 ~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~ 317 (334)
+++++.+.|++.++.+..+++|+|+|++++..... .++.+++.++++++||.+.||..|+...++++|++++ .+++
T Consensus 299 ~~~~~~~~L~~~~~~~~~p~~g~~i~i~l~~~~~~---~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~-~~~~ 374 (395)
T PRK08175 299 RRDVLVKGLHEAGWMVEMPKASMYVWAKIPEPYAA---MGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALI-ENRD 374 (395)
T ss_pred HHHHHHHHHHHcCCcccCCCEEEEEEEECCcccCC---CCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeC-CCHH
Confidence 99999999999988888888999999999865321 1346788888888999999999987656689999998 6789
Q ss_pred cHHHHHHHHHHHHHH
Q 019899 318 DIPLVIERIQKVAET 332 (334)
Q Consensus 318 ~l~~~l~~l~~~~~~ 332 (334)
.+.+++++|++++++
T Consensus 375 ~~~~al~~l~~~l~~ 389 (395)
T PRK08175 375 RIRQAIRGIKAMFRA 389 (395)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999876
No 56
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=9.4e-44 Score=320.39 Aligned_cols=304 Identities=23% Similarity=0.330 Sum_probs=253.3
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccH
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
++++.+..+ ..+++++|++|+|+++++..++.+++++||+|+++.|+|+.+...++ ..|.+++.+++++++++.+|.
T Consensus 77 a~~~~~~~g--~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~~~ 153 (386)
T PRK07550 77 AAHYSRLYG--AAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLD-MLGIRPVYLPCDEGPGLLPDP 153 (386)
T ss_pred HHHHHHHhC--CCCCcceEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH-hcCCEEEEEecCCCcCCCCCH
Confidence 455555445 56788999999999999999999999999999999999999998888 899999999986556778899
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
+++++++++ +++++++++|+||||.++|.+++++|+++|++++++||+|++|+++.+.+....+......
T Consensus 154 ~~l~~~~~~------~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~---- 223 (386)
T PRK07550 154 AAAEALITP------RTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPD---- 223 (386)
T ss_pred HHHHHHhcc------cCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCC----
Confidence 999999976 7889999999999999999999999999999999999999999988664322222322111
Q ss_pred CCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc--cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHH
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLY 239 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (334)
..++++++.||||.+|++|+|+||+++ ++++++.+...... .+.+.+.|.++..++.. .+++.++.++.+++++
T Consensus 224 ~~~~~i~~~S~SK~~g~~G~RiG~i~~-~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~ 299 (386)
T PRK07550 224 WDDTLVHLYSFSKSYALTGHRVGAVVA-SPARIAEIEKFMDTVAICAPRIGQIAVAWGLPN---LADWRAGNRAEIARRR 299 (386)
T ss_pred ccccEEEEecchhhccCcccceEeeec-CHHHHHHHHHHHhhcccCCCcHHHHHHHHHhcc---HHHHHHHHHHHHHHHH
Confidence 146789999999999999999999998 78888888766543 45688899999998865 2566677888999999
Q ss_pred HHHHHHHHhC-CCcccCCCceeEEeeecCC-cCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcc
Q 019899 240 DSFVAGLKQL-GIRCSESSAGLYCWADMSG-LIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHE 317 (334)
Q Consensus 240 ~~~~~~l~~~-g~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~ 317 (334)
+.+.+.|++. ++.+ .+.+++++|++++. .. ++.+++..|++++||.+.||..|+...++++|++++..+++
T Consensus 300 ~~l~~~L~~~~~~~~-~~~g~~~~~~~~~~~~~------~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~ 372 (386)
T PRK07550 300 DAFRAVFARLPGWEL-LASGAYFAYVRHPFPDR------PSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFANADVA 372 (386)
T ss_pred HHHHHHHHhCCCcee-CCCceEEEEecCCCCCC------CHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeecCCHH
Confidence 9999999886 6544 35689999999875 32 34688898888899999999999765568999999866889
Q ss_pred cHHHHHHHHHHH
Q 019899 318 DIPLVIERIQKV 329 (334)
Q Consensus 318 ~l~~~l~~l~~~ 329 (334)
++++++++|+++
T Consensus 373 ~~~~~~~~l~~~ 384 (386)
T PRK07550 373 GIGELVERLRAF 384 (386)
T ss_pred HHHHHHHHHHhh
Confidence 999999999875
No 57
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-43 Score=321.57 Aligned_cols=307 Identities=26% Similarity=0.453 Sum_probs=255.5
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccc-c
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAF-S 80 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~-~ 80 (334)
++++.. .+ +++++++|++|+|+++++..++..++++||+|++++|+|..+...++ ..|.+++.++++.++++.. +
T Consensus 76 a~~~~~-~~--~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~v~~~~~~g~~~~~ 151 (397)
T PRK07568 76 AKYYKK-WG--IDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFAT-SAGVKIVPVTTKIEEGFHLPS 151 (397)
T ss_pred HHHHHH-hC--CCCCcceEEEcCChHHHHHHHHHHhcCCCCEEEEecCCCccHHHHHH-HcCCEEEEeecCcccCCCCCC
Confidence 445542 33 57889999999999999999999999999999999999999988887 8899999999854445443 6
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
+++++++++. +++++++++|+||||.+++.+++++|+++|+++++++|+|++|+++.+.+..+.++..+..
T Consensus 152 ~~~l~~~~~~------~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~--- 222 (397)
T PRK07568 152 KEEIEKLITP------KTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEG--- 222 (397)
T ss_pred HHHHHHhcCc------cceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCC---
Confidence 7899888865 7899999999999999999999999999999999999999999999887655555555432
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc-ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR-FCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLY 239 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (334)
..++++++.|+||.+|++|+|+||++++++++++.+..... .++.+.+.|.++..+++.. ++++.++++.+++++
T Consensus 223 -~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~ 298 (397)
T PRK07568 223 -LEDRVIIIDSVSKRYSACGARIGCLISKNKELIAAAMKLCQARLSPPTLEQIGAAALLDTP---ESYFDEVREEYKKRR 298 (397)
T ss_pred -CcCCEEEEecchhhccCCCcceEEEecCCHHHHHHHHHHhhccCCCCcHHHHHHHHHhhCC---HHHHHHHHHHHHHHH
Confidence 15789999999999999999999999866788887765433 3678889999999998753 456678888999999
Q ss_pred HHHHHHHHhC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHh-----cCeEEcCCCCcCCC---CCCeEEEE
Q 019899 240 DSFVAGLKQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNI-----AKINVTPGSACHCI---EPGWFRCC 310 (334)
Q Consensus 240 ~~~~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~-----~gi~v~~g~~~~~~---~~~~iRi~ 310 (334)
+.+.+.|+++ ++.+..|.+|+++|++++.. ++.++...++++ .||.+.||..|+.. .++++|++
T Consensus 299 ~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~~-------~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls 371 (397)
T PRK07568 299 DILYEELNKIPGVVCEKPKGAFYIIAKLPVD-------DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIA 371 (397)
T ss_pred HHHHHHHhcCCCceecCCCcceEEEEecCCC-------CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEE
Confidence 9999999887 67777889999999999752 345788887764 69999999988532 24799999
Q ss_pred ecCCCcccHHHHHHHHHHHHHHc
Q 019899 311 FTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 311 ~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
++ .+++++++++++|+++++++
T Consensus 372 ~~-~~~~~~~~~~~~l~~~l~~~ 393 (397)
T PRK07568 372 YV-LNEEDLKRAMEILKEALEKY 393 (397)
T ss_pred Ee-CCHHHHHHHHHHHHHHHHHh
Confidence 98 67899999999999998764
No 58
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=1.6e-44 Score=323.52 Aligned_cols=307 Identities=34% Similarity=0.588 Sum_probs=266.0
Q ss_pred hhhhhhhhcCCCCCCCC-cEEEecCcHHHHHHHHHHh-cCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccc
Q 019899 2 AGFMSQVLGQAVSFDPS-QIVLTAGATPAVEILCFCL-ADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~-~i~~~~g~~~~~~~~~~~l-~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~ 79 (334)
|+|+.+..+ +.++++ +|++++|+.+++..++..+ .++||+|+++.|+|+.+...++ ..|.+++.+++..++++++
T Consensus 54 a~~~~~~~~--~~~~~~~~i~~~~G~~~~~~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~-~~g~~~~~~~~~~~~~~~~ 130 (363)
T PF00155_consen 54 ADFLGRRYG--VPVDPEANILVTSGAQAALFLLLRLLKINPGDTVLVPDPCYPSYIEAAR-LLGAEVIPVPLDSENDFHL 130 (363)
T ss_dssp HHHHHHHHT--HHTTGGEGEEEESHHHHHHHHHHHHHHSSTTSEEEEEESSSTHHHHHHH-HTTSEEEEEEEEETTTTEE
T ss_pred HHHhhhccC--cccccceEEEEecccccchhhhhhcccccccccceecCCcccccccccc-ccCceeeeccccccccccc
Confidence 556664444 667888 9999999999999999999 8899999999999999999999 9999999999866688899
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcch-hhhhhhc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVS-MAEILEA 158 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~-~~~~~~~ 158 (334)
|+++|++.+++...++.+++++++++|+||||.+++.+++++|+++|++++++||+||+|+.+.++.....+ ...+..
T Consensus 131 d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~- 209 (363)
T PF00155_consen 131 DPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDE- 209 (363)
T ss_dssp THHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTT-
T ss_pred cccccccccccccccccccceeeecccccccccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccc-
Confidence 999999999975444335789999999999999999999999999999999999999999999987554333 233322
Q ss_pred cccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 159 EEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 159 ~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
..+++++.|+||.+|++|+|+||+++ ++++++.++.....+..+++.+.++..++.......+++.+++++++++
T Consensus 210 ----~~~vi~~~S~SK~~g~~GlRvG~i~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~ 284 (363)
T PF00155_consen 210 ----DDNVIVVGSLSKSFGLPGLRVGYIVA-PPELIERLRRFQRSGLSSSPMQAAAAAALSDPELVEKWLEELRERLREN 284 (363)
T ss_dssp ----TSTEEEEEESTTTTTSGGGTEEEEEE-EHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----cccceeeeeccccccccccccccccc-hhhhhhhhhhccccccccchhhHHHHHhhhcccccccccccchhhHHHH
Confidence 45589999999999999999999999 8999999998888777799999999999887654455889999999999
Q ss_pred HHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCccc
Q 019899 239 YDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHED 318 (334)
Q Consensus 239 ~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~ 318 (334)
++++.+.|++.++.+..+++|+++|+.++.. ++.++.+.|+++.||.+.||..|+. ++++|++++..++++
T Consensus 285 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~L~~~~gi~v~pg~~~~~--~~~iRi~~a~~~~e~ 355 (363)
T PF00155_consen 285 RDLLREALEEIGITVLPPEAGFFLWVRLDPN-------DAEELAQELLEEYGILVRPGSYFGV--PGYIRISLASHSEED 355 (363)
T ss_dssp HHHHHHHHHHTTSEEEHHSBSSEEEEEESHH-------HHHHHHHHHHHHHTEEEEEGGGGTS--TTEEEEEGGCSCHHH
T ss_pred HHHHHHHHHHhhhheeeccCccEEEEEcccc-------hHHHHHHHHHHhCCEEEEecCCCCC--CCEEEEEeccCCHHH
Confidence 9999999999999999888999999998864 4578999988877999999999987 889999995479999
Q ss_pred HHHHHHHH
Q 019899 319 IPLVIERI 326 (334)
Q Consensus 319 l~~~l~~l 326 (334)
+++++++|
T Consensus 356 ~~~~~~~l 363 (363)
T PF00155_consen 356 LEEALERL 363 (363)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhhC
Confidence 99999986
No 59
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=3.1e-43 Score=315.09 Aligned_cols=298 Identities=21% Similarity=0.307 Sum_probs=238.9
Q ss_pred ChhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcc
Q 019899 1 MAGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLA--DHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFA 78 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~ 78 (334)
+|+|+.++.+ +.+++++|++|+|+++++..++..++ ++||.|++++|+|+.+...+. ..|++++.++++.++++.
T Consensus 69 ia~~l~~~~g--~~~~~~~I~it~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~-~~g~~v~~v~~~~~~~~~ 145 (374)
T PRK05839 69 QRGFFKRRFK--IELKENELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAI-ASRAKVLLMPLTKENDFT 145 (374)
T ss_pred HHHHHHHHhC--CCCCcceEEEecCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhHHHHH-hcCCEEEEeecccccCCc
Confidence 3567766656 67899999999999999999888764 578999999999999999998 999999999986666777
Q ss_pred ccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhc
Q 019899 79 FSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEA 158 (334)
Q Consensus 79 ~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~ 158 (334)
+|+++.+ + + +++++++++|+||||.++|.+++++|+++|+++|++||+||+|.++.+.+ ...++......
T Consensus 146 ~d~~~~~--~-~------~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~-~~~s~~~~~~~ 215 (374)
T PRK05839 146 PSLNEKE--L-Q------EVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENT-PPPSLLEASIL 215 (374)
T ss_pred CCcchhh--h-c------cccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCC-CCCCHhhhhcc
Confidence 7765432 2 2 68999999999999999999999999999999999999999999976543 23333322110
Q ss_pred c-ccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHH
Q 019899 159 E-EVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDTKFIQEYLETNKRRI 235 (334)
Q Consensus 159 ~-~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 235 (334)
. ..+.+++++++||||.++++|+|+||+++ ++++++.+..... .++.+...|.++..++... +++.+.++++
T Consensus 216 ~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~-~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~----~~~~~~~~~~ 290 (374)
T PRK05839 216 VGNESFKNVLVINSISKRSSAPGLRSGFIAG-DASILKKYKAYRTYLGCASPLPLQKAAAVAWLDD----EHAEFFRNIY 290 (374)
T ss_pred cCccccCcEEEEeccccccCCccceeEEEec-CHHHHHHHHHHHhhcCCCCChHHHHHHHHHhccc----hHHHHHHHHH
Confidence 0 01247899999999999999999999998 7889888877643 3567888888888777553 3456667788
Q ss_pred HHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC--CCCeEEEEecC
Q 019899 236 KKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI--EPGWFRCCFTS 313 (334)
Q Consensus 236 ~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~--~~~~iRi~~~~ 313 (334)
+++++.+.+.| ++. .|.+|+|+|++++. ..+++.++++++||.+.||..|+.. .++++|++++
T Consensus 291 ~~~~~~~~~~l---~~~--~p~gg~fi~~~~~~---------~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~- 355 (374)
T PRK05839 291 AKNLKLAREIL---GIT--IPPATFYVWLPVDN---------DEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALV- 355 (374)
T ss_pred HHHHHHHHHhc---CCC--CCCeeEEEEEeCCC---------hHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEec-
Confidence 88888877765 333 67899999999873 2578888777799999999888653 3689999998
Q ss_pred CCcccHHHHHHHHHHHHH
Q 019899 314 LTHEDIPLVIERIQKVAE 331 (334)
Q Consensus 314 ~~~~~l~~~l~~l~~~~~ 331 (334)
.+++++.+++++|+++++
T Consensus 356 ~~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 356 YDTPKLEKALEIIKTYLE 373 (374)
T ss_pred CCHHHHHHHHHHHHHHhh
Confidence 578999999999999875
No 60
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.4e-43 Score=315.07 Aligned_cols=295 Identities=20% Similarity=0.355 Sum_probs=246.3
Q ss_pred hhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHH
Q 019899 4 FMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITA 83 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~ 83 (334)
.+++.+++.+++++++|++|+|+++++..++.++ .+ +.|++++|+|+.+...++ ..|.+++.++++.++++.+| ++
T Consensus 58 ~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~~-~~-~~v~i~~P~y~~~~~~~~-~~g~~~~~~~~~~~~~~~~d-~~ 133 (354)
T PRK06358 58 ELRKRIASFEQLDLENVILGNGATELIFNIVKVT-KP-KKVLILAPTFAEYERALK-AFDAEIEYAELTEETNFAAN-EI 133 (354)
T ss_pred HHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHh-CC-CcEEEecCChHHHHHHHH-HcCCeeEEEeCccccCCCcc-HH
Confidence 3566666667889999999999999999999987 34 589999999999999988 89999999998656677888 67
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCC
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDK 163 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (334)
+.+.+.+ +++++++++|+||||.+++.+++++|+++|+++++++|+||+|.+|.+++.....+..+.. .
T Consensus 134 ~~~~~~~------~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~-----~ 202 (354)
T PRK06358 134 VLEEIKE------EIDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLEN-----F 202 (354)
T ss_pred HHHhhcc------CCCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccC-----C
Confidence 6666643 6899999999999999999999999999999999999999999999886543222333322 5
Q ss_pred CcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHH
Q 019899 164 DRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFV 243 (334)
Q Consensus 164 ~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (334)
+++++++||||.+|++|+|+||++++++.+++.+.+....++.+.+.|.++..++... +++.+.++.++++++.+.
T Consensus 203 ~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~----~~~~~~~~~~~~~r~~l~ 278 (354)
T PRK06358 203 KNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMREPWSINTFADLAGQTLLDDK----EYIKKTIQWIKEEKDFLY 278 (354)
T ss_pred CCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCCCCcchHHHHHHHHHHhccH----HHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999999998678888888887777888999999999998653 345667778889999999
Q ss_pred HHHHhC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHH
Q 019899 244 AGLKQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLV 322 (334)
Q Consensus 244 ~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~ 322 (334)
+.|++. ++.+..+.++ |+|++++.. .++.+.|++ +||.+.||..|+...++++|++++ ++++.+++
T Consensus 279 ~~L~~~~~~~~~~~~g~-f~~~~~~~~---------~~~~~~l~~-~gI~v~~~~~f~~~~~~~iRls~~--~~~~~~~l 345 (354)
T PRK06358 279 NGLSEFKGIKVYKPSVN-FIFFKLEKP---------IDLRKELLK-KGILIRSCSNYRGLDENYYRVAVK--SREDNKKL 345 (354)
T ss_pred HHHhcCCCcEEcCCcce-EEEEEcCch---------HHHHHHHHH-CCeEEEECCCCCCCCCCEEEEEeC--CHHHHHHH
Confidence 999887 7776667555 788988742 578888665 799999999985445689999998 88999999
Q ss_pred HHHHHHHH
Q 019899 323 IERIQKVA 330 (334)
Q Consensus 323 l~~l~~~~ 330 (334)
++.|++++
T Consensus 346 ~~~l~~~~ 353 (354)
T PRK06358 346 LKALEVIL 353 (354)
T ss_pred HHHHHHHh
Confidence 99998875
No 61
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.1e-43 Score=320.25 Aligned_cols=296 Identities=19% Similarity=0.369 Sum_probs=233.4
Q ss_pred CCcEEEecCcHHHHHHHHHH-----hcCCCCeEEecCCCCCChhhhhhhcc--CcEEEEEeCCCCCCccccHHHHHHHHH
Q 019899 17 PSQIVLTAGATPAVEILCFC-----LADHGNALLVPSPYYPGFDRDIRFRT--GVELIPVHCRSTDNFAFSITALDQAFN 89 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~-----l~~~gd~vl~~~p~~~~~~~~~~~~~--g~~v~~v~~~~~~~~~~~~~~l~~~l~ 89 (334)
.++|++|+|+++++..++.+ ++++||+|++++|+|+.|...++ .. |.+++.++..++++|++|.++++++++
T Consensus 161 ~~~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~-l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~ 239 (527)
T PRK09275 161 EFDLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPE-LPRYDLEVVHINADEENEWQYPDSELEKLRD 239 (527)
T ss_pred cCeEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHH-HcCCCeEEEEeecCcccCCCCCHHHHHhhcC
Confidence 34899999999999999886 68999999999999999999877 65 456666666556779999999999876
Q ss_pred HHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHh--cCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEE
Q 019899 90 QARKRGVKVRGILICNPANPVGNIIPRETLYELLDFARE--KNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVH 167 (334)
Q Consensus 90 ~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~--~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (334)
+ ++|++++++|+||||.++|.+++++|+++|++ ++++||+||+|+.+.+ .+.++.... +++++
T Consensus 240 ~------~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~s~~~~~------~~~~I 304 (527)
T PRK09275 240 P------SIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVD---DFRSLFAVL------PYNTI 304 (527)
T ss_pred C------CCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcc---cccCHHHhC------CCCEE
Confidence 5 89999999999999999999999999999954 5999999999999775 233443332 57899
Q ss_pred EEecccccCCCCCceEEEEeecCHHHHH----HH--------------------------------HHhh--cccCCChH
Q 019899 168 IIYGLSKDLSLPGFRTGVIYSYNESVLA----AA--------------------------------KKLT--RFCSISAP 209 (334)
Q Consensus 168 ~~~s~sK~~~~~g~r~g~i~~~~~~~~~----~~--------------------------------~~~~--~~~~~~~~ 209 (334)
++.||||.++++|+|+||++++++.+.+ .+ ++.. ...+.+++
T Consensus 305 ~v~SfSK~f~mtG~RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p 384 (527)
T PRK09275 305 LVYSFSKYFGATGWRLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTP 384 (527)
T ss_pred EEeehhhhccCcHhHHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCH
Confidence 9999999999999999999995543222 11 1221 23466778
Q ss_pred HHHHH-----HHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCC-C---------C
Q 019899 210 TQRLL-----ISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPS-Y---------S 274 (334)
Q Consensus 210 ~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~-~---------~ 274 (334)
.|.++ .+++... +++..++++.++++++.+.+.|. .++....+.++||+|++++..... . .
T Consensus 385 ~Q~a~al~~~~all~~~---~~~~~~~~~~~~~Rr~~l~~~Lg-~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~ 460 (527)
T PRK09275 385 QQVQMALFSLFALLDEE---DAYKKAMKDIIRRRYKALYEGLG-LPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKK 460 (527)
T ss_pred HHHHHHHHHHHHHHhCc---hHHHHHHHHHHHHHHHHHHHHcC-CCCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhc
Confidence 88863 3444432 45667888899999999988882 233335688999999999753210 0 0
Q ss_pred hhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHHHHHHHHHHHc
Q 019899 275 EKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 275 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
..++.+++.+|+++.||.+.||..||. .++++|+|++..+++++.++.++|+++++++
T Consensus 461 ~~~~~~f~~~Ll~e~gV~v~PG~~Fg~-~~~~vRis~a~~~~~~~~~~~~rl~~~l~~y 518 (527)
T PRK09275 461 NYSPVDLLFRLAEETGVVLLPGGGFGG-PEWSVRVSLANLNEEDYAKIGKAIRKLLDEY 518 (527)
T ss_pred cCCHHHHHHHHHhcCCEEEeCchhhCC-CCCeEEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 124578999999999999999999986 3678999999778899999999999999875
No 62
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=9.4e-43 Score=335.01 Aligned_cols=319 Identities=17% Similarity=0.275 Sum_probs=253.9
Q ss_pred ChhhhhhhhcCCCCCCC-CcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccc
Q 019899 1 MAGFMSQVLGQAVSFDP-SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~-~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~ 79 (334)
|++|+.++.+ +..++ ++|++++|+++++..++.+++++||.|+++.|+|+.|...++ ..|.+++.+|+.+++++.+
T Consensus 739 La~~la~~~G--v~~d~~e~IIvt~Gs~elL~lll~aLl~pGD~VLVp~PtY~~Y~~~a~-~~Ga~vv~Vpl~~e~gf~l 815 (1082)
T PLN02672 739 ILQFIKSNYG--FPTDSCTEFVYGDTSLALFNKLVLCCVQEGGTLCFPAGSNGTYVSAAK-FLKANFRRIPTKSSDGFKL 815 (1082)
T ss_pred HHHHHHHHhC--cCCCCCCEEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHH-HcCCEEEEEecccccCCCC
Confidence 4567777666 55544 489999999999999999999999999999999999999999 9999999999976678999
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCC-CCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCc--chhhhhh
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPA-NPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEF--VSMAEIL 156 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~-nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~--~~~~~~~ 156 (334)
|.+.+++++++. +.+++++++|+ ||||.+++.+++++|+++|++|+++||+||+|+++.|++... .++.+..
T Consensus 816 D~d~Le~al~~~-----~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l 890 (1082)
T PLN02672 816 TAKTLASTLETV-----KKPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSIL 890 (1082)
T ss_pred CHHHHHHHhccC-----CCCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHH
Confidence 999999998641 34579999997 999999999999999999999999999999999998865421 1222211
Q ss_pred hccc-c-CCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhh---C--ChHHHHHHHH
Q 019899 157 EAEE-V-DKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISML---S--DTKFIQEYLE 229 (334)
Q Consensus 157 ~~~~-~-~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~--~~~~~~~~~~ 229 (334)
...+ . +..++++++||||.++++|+|+||++++++++++.+.........+...+.++..++ . ...+ .+++.
T Consensus 891 ~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~eLi~~l~~~~~~s~~~~~~q~Aaaaalall~~~~~~~-~~~l~ 969 (1082)
T PLN02672 891 SRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALNDSVLIDAFHSAPGLSRPHSTLKYTIKKLLGLKNQKSSDL-LDGVA 969 (1082)
T ss_pred HHhccccCCceEEEEeCcHHhhccHHHHheeEEeCCHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHhccCcHH-HHHHH
Confidence 1000 0 124799999999999999999999999667788888775444333344454444433 2 2333 45678
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCC------C-----CChhhHHHHHHHHHHhcCeEEcCCCC
Q 019899 230 TNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIP------S-----YSEKGELELWDKLLNIAKINVTPGSA 298 (334)
Q Consensus 230 ~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~------~-----~~~~~~~~~~~~ll~~~gi~v~~g~~ 298 (334)
+.++.++++++++.+.|++.|+.+..|++||++|++++.... . ....++.+++..|+++.||.+.||..
T Consensus 970 e~r~~Lk~rRd~L~e~L~~~Gi~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~ 1049 (1082)
T PLN02672 970 EQKKILKSRAERLKETLEACGWDVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSW 1049 (1082)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCeEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcc
Confidence 888899999999999999999999999999999998753211 0 01235678999999888999999988
Q ss_pred cCCCCCCeEEEEecCCCcccHHHHHHHHHHHHH
Q 019899 299 CHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAE 331 (334)
Q Consensus 299 ~~~~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~ 331 (334)
|+. ++++|++++ .+++++++++++|+++.+
T Consensus 1050 FG~--~g~~RIsfa-~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1050 TGI--PGYCRFSFA-LEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred cCC--CCeEEEEec-CCHHHHHHHHHHHHHHHH
Confidence 874 789999999 678899999999998764
No 63
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=9e-43 Score=316.83 Aligned_cols=292 Identities=16% Similarity=0.324 Sum_probs=231.0
Q ss_pred cEEEecCcHHHHHHHHHH-----hcCCCCeEEecCCCCCChhhhhhhc--cCcEEEEEeCCCCCC-----ccccHHHHHH
Q 019899 19 QIVLTAGATPAVEILCFC-----LADHGNALLVPSPYYPGFDRDIRFR--TGVELIPVHCRSTDN-----FAFSITALDQ 86 (334)
Q Consensus 19 ~i~~~~g~~~~~~~~~~~-----l~~~gd~vl~~~p~~~~~~~~~~~~--~g~~v~~v~~~~~~~-----~~~~~~~l~~ 86 (334)
+|++|+|+++|+..++.+ ++++||+|++++|+|+.|...+. . .|.+++.++....++ |++|.+++++
T Consensus 157 ~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~-l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~ 235 (521)
T TIGR03801 157 DLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPE-LPRYDFEVVRIKADEMTEDGTHTWQYPDKELEK 235 (521)
T ss_pred eEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHH-HhcCCcEEEEeecccccccccccCCCCHHHHHH
Confidence 899999999999999887 68999999999999999999876 5 478888888754333 8899999998
Q ss_pred HHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc--CcEEEEeccccccccCCCCcchhhhhhhccccCCC
Q 019899 87 AFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK--NIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKD 164 (334)
Q Consensus 87 ~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~--~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (334)
++++ +++++++++|+||||.++|.+++++|+++|++| +++||+||+|+.|.+ .+.++.... ++
T Consensus 236 ~~~~------~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~sl~~~~------~~ 300 (521)
T TIGR03801 236 LRDP------SIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD---DFRSLFAEL------PY 300 (521)
T ss_pred hcCC------CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc---cccchhhhC------CC
Confidence 7765 899999999999999999999999999999986 999999999998775 233444332 56
Q ss_pred cEEEEecccccCCCCCceEEEEeecCHHHH------------HHH------------------------HHhh--cccCC
Q 019899 165 RVHIIYGLSKDLSLPGFRTGVIYSYNESVL------------AAA------------------------KKLT--RFCSI 206 (334)
Q Consensus 165 ~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~------------~~~------------------------~~~~--~~~~~ 206 (334)
+++++.|+||.+|++|+|+||++++++.+. +.+ +... ...+.
T Consensus 301 ~vI~v~SfSK~fg~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~ 380 (521)
T TIGR03801 301 NTIGVYSFSKYFGATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGL 380 (521)
T ss_pred CEEEEEcchhhccCchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCC
Confidence 899999999999999999999998544221 111 1111 22455
Q ss_pred ChHHHH-----HHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc--ccCCCceeEEeeecCCcCCC-C-----
Q 019899 207 SAPTQR-----LLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIR--CSESSAGLYCWADMSGLIPS-Y----- 273 (334)
Q Consensus 207 ~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~--~~~~~~g~~~~~~~~~~~~~-~----- 273 (334)
+++.|. ++.+++... ..+..++++.++++++.+.+.| |+. ...+.++||+|++++..... .
T Consensus 381 s~p~Q~q~al~a~~all~~~---~~y~~~~~~~~~~R~~~l~~~L---g~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~ 454 (521)
T TIGR03801 381 STPQQVQMALFSLFALMDKE---NAYKAETKDICRRREKLLFRGL---GLPLQEDPNDVAYYTLIDLEEWAEKNYGEEFS 454 (521)
T ss_pred CcHHHHHHHHHHHHHHhccc---hhHHHHHHHHHHHHHHHHHHhc---CCCCcCCCCCeEEEEEeehHHHHHHhcchHHH
Confidence 677676 233444432 4567788889999999999888 454 34678899999999853110 0
Q ss_pred ----ChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHHHHHHHHHHHc
Q 019899 274 ----SEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 274 ----~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
...+..+++.+|+++.||.+.||..|+.. ++++|+|++..+++++.++.++|+++++++
T Consensus 455 ~~l~~~~~~~~~~~~L~~e~gV~v~PG~~Fg~~-~~~vRisla~l~~~~~~~~~~rl~~~~~~~ 517 (521)
T TIGR03801 455 SYLKKNYSPVDVLFRLAEETGIVLLPGGGFGGP-EWSVRVSLANLNEYDYAEIGRAIRKILDEY 517 (521)
T ss_pred HHHhccCCHHHHHHHHHHhCCEEEeCchhcCCC-CCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Confidence 01145789999999999999999999863 568999999779999999999999999764
No 64
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=1.7e-42 Score=313.42 Aligned_cols=289 Identities=23% Similarity=0.320 Sum_probs=233.1
Q ss_pred CCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCc-----------EEEEEeCCCCCCccccHH
Q 019899 14 SFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGV-----------ELIPVHCRSTDNFAFSIT 82 (334)
Q Consensus 14 ~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~-----------~v~~v~~~~~~~~~~~~~ 82 (334)
.+++++|++|+|+++++..++ .++.+||+|++++|+|+.+...++ ..|. +++.+++..++++..+++
T Consensus 92 ~~~~d~I~it~Ga~~al~~l~-~l~~~gd~Vlv~~P~y~~~~~~~~-~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 169 (402)
T TIGR03542 92 RIDPEEIFISDGAKCDVFRLQ-SLFGSDNTVAVQDPVYPAYVDSNV-MAGRAGVLDDDGRYSKITYLPCTKENNFIPDLP 169 (402)
T ss_pred CCCHHHEEECCCcHHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHH-HcCCccccccccccceEEEeecchhhCCCCCcc
Confidence 478999999999999999864 556899999999999999999998 8999 999998754455555532
Q ss_pred HHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccC
Q 019899 83 ALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVD 162 (334)
Q Consensus 83 ~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (334)
. . .+++++++++|+||||.++|.+++++|+++|++++++||+||+|.++.+++..+.++..+.. .
T Consensus 170 ~------~-----~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~----~ 234 (402)
T TIGR03542 170 E------E-----PKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPG----A 234 (402)
T ss_pred c------c-----CCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCC----C
Confidence 1 1 27899999999999999999999999999999999999999999998876533334444432 1
Q ss_pred CCcEEEEecccccCCCCCceEEEEeecCHHHH--------HHHHH-hhc-ccCCChHHHHHHHHhhCChHHHHHHHHHHH
Q 019899 163 KDRVHIIYGLSKDLSLPGFRTGVIYSYNESVL--------AAAKK-LTR-FCSISAPTQRLLISMLSDTKFIQEYLETNK 232 (334)
Q Consensus 163 ~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~--------~~~~~-~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 232 (334)
.+++++++||||.+|++|+|+||+++ +++++ +.+.. ... ..+.+.+.|.++..++....+ .+..+.+
T Consensus 235 ~~~vi~~~SfSK~~g~pGlRiG~~i~-~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~--~~~~~~~ 311 (402)
T TIGR03542 235 KECAIEFRSFSKTAGFTGVRLGWTVV-PKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGL--QPILEAI 311 (402)
T ss_pred cccEEEEecCccccCCCCcceEEEEe-cHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcch--hHHHHHH
Confidence 36789999999999999999999999 66665 22221 222 335788999988888876432 3345667
Q ss_pred HHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEec
Q 019899 233 RRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFT 312 (334)
Q Consensus 233 ~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~ 312 (334)
+.++++++.+.+.|++.++++..+.+++|+|++++...+ +.++...++++.||.+.||+.|+...++++|++++
T Consensus 312 ~~~~~~~~~~~~~L~~~~~~~~~~~~~~f~~v~l~~~~~------~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~ 385 (402)
T TIGR03542 312 SYYMENARILRKALEAAGFKVYGGEHAPYLWVKTPEGIS------SWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAF 385 (402)
T ss_pred HHHHHHHHHHHHHHHhcCceecCCCceeEEEEECCCCCC------HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec
Confidence 888999999999999888887778899999999986433 36889998888899999999987655789999986
Q ss_pred CCCcccHHHHHHHHHHH
Q 019899 313 SLTHEDIPLVIERIQKV 329 (334)
Q Consensus 313 ~~~~~~l~~~l~~l~~~ 329 (334)
.+++++++++++|+++
T Consensus 386 -~~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 386 -GKRENIVEACERIKEA 401 (402)
T ss_pred -CCHHHHHHHHHHHHhh
Confidence 5889999999999875
No 65
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=5.4e-43 Score=311.82 Aligned_cols=287 Identities=17% Similarity=0.277 Sum_probs=239.2
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITAL 84 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l 84 (334)
+++.+++.+++++++|++|+|+++++..++.+++++||+|++++|+|+.|...++ ..|.+++.++++ ++.+|++++
T Consensus 69 Lr~aia~~~~~~~~~I~vt~Gs~e~i~~~~~~l~~~gd~vlv~~P~y~~~~~~~~-~~g~~v~~v~~~---~~~~d~~~l 144 (366)
T PRK01533 69 LRQTIANKLHVKMEQVLCGSGLDEVIQIISRAVLKAGDNIVTAGATFPQYRHHAI-IEGCEVKEVALN---NGVYDLDEI 144 (366)
T ss_pred HHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHH-HcCCEEEEeecC---CCCcCHHHH
Confidence 5566666677899999999999999999999999999999999999999999998 999999999973 447999999
Q ss_pred HHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCC
Q 019899 85 DQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKD 164 (334)
Q Consensus 85 ~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (334)
++++++ +++++++++|+||||.+++.+++++|+++|++++ ++|+||+|.+|.+.+.....+..+.. .+
T Consensus 145 ~~~~~~------~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~-----~~ 212 (366)
T PRK01533 145 SSVVDN------DTKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEK-----HK 212 (366)
T ss_pred HHHhCc------CCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhcc-----CC
Confidence 998865 7899999999999999999999999999998877 56679999988765322222222222 57
Q ss_pred cEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHH
Q 019899 165 RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVA 244 (334)
Q Consensus 165 ~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (334)
+++++.||||.+|++|+|+||+++ ++++++.+.+....++.|.++|.++..++++.++ ..+.++...++++++.+
T Consensus 213 ~vi~~~SfSK~~~l~GlRiG~~i~-~~~~~~~l~~~~~~~~~~~~~q~aa~~~l~~~~~----~~~~~~~~~~~r~~~~~ 287 (366)
T PRK01533 213 NILVLRTFSKAYGLASFRVGYAVG-HEELIEKLNVVRLPFNVSSLAQKAATIAFGDDEF----IEEIVRVNTEGLRQYES 287 (366)
T ss_pred CEEEEeCchHHhcChHHHHhHHhC-CHHHHHHHHHhcCCCCcCHHHHHHHHHHhCCHHH----HHHHHHHHHHHHHHHHH
Confidence 899999999999999999999998 7899999988777788999999999999976443 44556667777888888
Q ss_pred HHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHHH
Q 019899 245 GLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIE 324 (334)
Q Consensus 245 ~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l~ 324 (334)
.++..|+++..+. +.|+|++++. +.++.+.|+ ++||.|++ | ++++||+++ ++++.+++++
T Consensus 288 ~l~~~g~~~~~~~-~nf~~~~~~~---------~~~~~~~l~-~~GI~Vr~---~----~~~iRis~~--~~~~~~~l~~ 347 (366)
T PRK01533 288 FCKENEIPFYQSQ-TNFIFLPVEN---------GGEIYEACA-HAGFIIRP---F----PNGVRITVG--TREQNEGVIS 347 (366)
T ss_pred HHHhCCCccCCCc-CcEEEEeCCC---------HHHHHHHHH-HCCcEEcc---C----CCceEEeCC--CHHHHHHHHH
Confidence 8888888877775 5578888862 246777755 59999997 3 468999998 8899999999
Q ss_pred HHHHHHHH
Q 019899 325 RIQKVAET 332 (334)
Q Consensus 325 ~l~~~~~~ 332 (334)
+|+++++.
T Consensus 348 al~~~~~~ 355 (366)
T PRK01533 348 VLQQHFEN 355 (366)
T ss_pred HHHHHHHh
Confidence 99998864
No 66
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-41 Score=307.42 Aligned_cols=296 Identities=27% Similarity=0.468 Sum_probs=244.8
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccH
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
++|+....+ +++++++|++|+|+++++..++.+++++||.|++++|+|..+...++ ..|.+++.+++++ +++.+|+
T Consensus 83 a~~l~~~~~--~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vli~~p~~~~~~~~~~-~~g~~v~~v~~~~-~~~~~d~ 158 (394)
T PRK06836 83 AESLNRRFG--TPLTADHIVMTCGAAGALNVALKAILNPGDEVIVFAPYFVEYRFYVD-NHGGKLVVVPTDT-DTFQPDL 158 (394)
T ss_pred HHHHHHHhC--CCCCcCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHH-HcCCEEEEEecCC-ccCcCCH
Confidence 556655545 57889999999999999999999999999999999999999998888 8999999999853 3468999
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHh------cCcEEEEeccccccccCCCCcchhhhh
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFARE------KNIHVISDEIYGGSIFGNEEFVSMAEI 155 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~------~~~~vi~D~~~~~~~~~~~~~~~~~~~ 155 (334)
+++++++++ +++++++++|+||||.++|.+++++|+++|++ |++++|+||+|.++.+++.....+...
T Consensus 159 ~~l~~~~~~------~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 232 (394)
T PRK06836 159 DALEAAITP------KTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKY 232 (394)
T ss_pred HHHHhhcCc------CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHc
Confidence 999999975 78999999999999999999999999999999 899999999999998865443333221
Q ss_pred hhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHH------HHHhhc---ccCCChHHHHHHHHhhCChHHHHH
Q 019899 156 LEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAA------AKKLTR---FCSISAPTQRLLISMLSDTKFIQE 226 (334)
Q Consensus 156 ~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~------~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~ 226 (334)
.+++++++|+||.+|++|+|+||+++ ++.+.+. +..... ..+.++..|.++..++.+..
T Consensus 233 -------~~~~i~~~S~SK~~~~pGlRiG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~---- 300 (394)
T PRK06836 233 -------YDNSIVVYSFSKSLSLPGERIGYIAV-NPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDATV---- 300 (394)
T ss_pred -------cCcEEEEecchhhccCcceeeEEEec-CHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCChH----
Confidence 56899999999999999999999998 5555322 111111 23577888999998887631
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCe
Q 019899 227 YLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGW 306 (334)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~ 306 (334)
.++.++++++.+.+.|++.|+.+..+.+|+++|+.+|.. +..++++. +.++||.+.||..|+. +++
T Consensus 301 ----~~~~~~~~r~~l~~~L~~~g~~~~~~~gg~~~~~~~~~~-------~~~~~~~~-l~~~gv~v~~g~~f~~--~~~ 366 (394)
T PRK06836 301 ----DVSIYKRNRDLLYDGLTELGFECVKPQGAFYLFPKSPEE-------DDVAFCEK-AKKHNLLLVPGSGFGC--PGY 366 (394)
T ss_pred ----HHHHHHHHHHHHHHHHHhCCCEeecCCceEEEEEeCCCC-------CHHHHHHH-HHhCCEEEECchhcCC--CCe
Confidence 245677788889999988898888888999999988752 23577766 5668999999998864 579
Q ss_pred EEEEecCCCcccHHHHHHHHHHHHHHcC
Q 019899 307 FRCCFTSLTHEDIPLVIERIQKVAETCK 334 (334)
Q Consensus 307 iRi~~~~~~~~~l~~~l~~l~~~~~~~~ 334 (334)
+||+++ .+++++++++++|++++++++
T Consensus 367 iRi~~~-~~~~~~~~~i~~l~~~l~~~~ 393 (394)
T PRK06836 367 FRLSYC-VDTETIERSLPAFEKLAKEYK 393 (394)
T ss_pred EEEEec-CCHHHHHHHHHHHHHHHHHhc
Confidence 999998 789999999999999998864
No 67
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=5.7e-42 Score=306.41 Aligned_cols=289 Identities=24% Similarity=0.386 Sum_probs=233.8
Q ss_pred ChhhhhhhhcCCCC-CCCCcEEEecCcHHHHHHHHHHh-cCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcc
Q 019899 1 MAGFMSQVLGQAVS-FDPSQIVLTAGATPAVEILCFCL-ADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFA 78 (334)
Q Consensus 1 i~~~~~~~~~~~~~-~~~~~i~~~~g~~~~~~~~~~~l-~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~ 78 (334)
+|+|+.++.+ +. +++++|++|+|+++++..++..+ +++||.|++++|+|+.+...++ ..|.+++.++.
T Consensus 71 ia~~l~~~~~--~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~~~~------- 140 (364)
T PRK07865 71 IVGWLARRRG--VTGLDPAAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGAR-LAGATVVRADS------- 140 (364)
T ss_pred HHHHHHHHcC--CCCCCcccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHH-hcCCEEEecCC-------
Confidence 3567766555 54 78999999999999999988888 7999999999999999999888 89999888752
Q ss_pred ccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhc
Q 019899 79 FSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEA 158 (334)
Q Consensus 79 ~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~ 158 (334)
++++++ .+++++++++|+||||.+++.+++++|+++|++++++||+||+|.++.+.+.....+.....
T Consensus 141 --~~~l~~---------~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~- 208 (364)
T PRK07865 141 --LTELGP---------QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVC- 208 (364)
T ss_pred --hhhCCc---------ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCcccccccc-
Confidence 223322 27899999999999999999999999999999999999999999998876532211111000
Q ss_pred cccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh--cccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHH
Q 019899 159 EEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT--RFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIK 236 (334)
Q Consensus 159 ~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 236 (334)
+.+.+++++++||||.++++|+|+||+++ ++++++.++... ..++.+++.|.++..++... +++.+.++.++
T Consensus 209 -~~~~~~~i~~~S~SK~~~~~GlRiG~i~~-~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~----~~~~~~~~~~~ 282 (364)
T PRK07865 209 -GGDHTGLLAVHSLSKQSNLAGYRAGFVAG-DPALVAELLEVRKHAGMMVPAPVQAAMVAALGDD----AHVREQRERYA 282 (364)
T ss_pred -CCccceEEEEeechhccCCCceeeEEEec-CHHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCCH----HHHHHHHHHHH
Confidence 01247899999999999999999999998 888888887654 33567889999999998763 34566778889
Q ss_pred HHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCc
Q 019899 237 KLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTH 316 (334)
Q Consensus 237 ~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~ 316 (334)
++++.+.+.|++.|+.+..+++|+|+|++++. +..++.+. ++++||.+.||..|+...++++|++++ .++
T Consensus 283 ~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~--------~~~~~~~~-l~~~gv~v~pg~~f~~~~~~~iRi~~~-~~~ 352 (364)
T PRK07865 283 RRRAVLRPALEAAGFRVDHSEAGLYLWATRGE--------DCWDTVAW-LAERGILVAPGDFYGPAGAQHVRVALT-ATD 352 (364)
T ss_pred HHHHHHHHHHHHcCCcccCCCccEEEEEeCCC--------CHHHHHHH-HHHCCEEEeCccccCcCCCCEEEEEec-CCH
Confidence 99999999999989888888999999998742 22456666 566899999999887655789999998 478
Q ss_pred ccHHHHHHHHH
Q 019899 317 EDIPLVIERIQ 327 (334)
Q Consensus 317 ~~l~~~l~~l~ 327 (334)
+++++++++|+
T Consensus 353 ~~~~~~~~~l~ 363 (364)
T PRK07865 353 ERIAAAVERLA 363 (364)
T ss_pred HHHHHHHHHhh
Confidence 99999998875
No 68
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.3e-42 Score=309.28 Aligned_cols=290 Identities=20% Similarity=0.254 Sum_probs=234.5
Q ss_pred CCCCCCcEE--EecCcHHHHHHHHH---HhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHH
Q 019899 13 VSFDPSQIV--LTAGATPAVEILCF---CLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQA 87 (334)
Q Consensus 13 ~~~~~~~i~--~~~g~~~~~~~~~~---~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~ 87 (334)
..+++++|+ .|.|+++++..++. +++++||+|++++|+|+.|...++ ..|.+++.+|+.+++++++|++.++++
T Consensus 91 ~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~-~~G~~~~~v~l~~~~~~~~d~~~l~~~ 169 (404)
T PTZ00376 91 YALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFK-SAGLNVKEYRYYDPKTKGLDFDGMLED 169 (404)
T ss_pred cccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHH-HcCCceeeccccCcccCCcCHHHHHHH
Confidence 346888998 58999999988875 668999999999999999999999 999999999985556689999999999
Q ss_pred HHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCC--CcchhhhhhhccccCCCc
Q 019899 88 FNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNE--EFVSMAEILEAEEVDKDR 165 (334)
Q Consensus 88 l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 165 (334)
++.. ..+.+++++++||||||.++|.+++++|+++|++|+++||+||+|.++.+.+. ...++..+.. ..++
T Consensus 170 ~~~~---~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~----~~~~ 242 (404)
T PTZ00376 170 LRTA---PNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAE----RGVE 242 (404)
T ss_pred HHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHh----cCCc
Confidence 8642 12457778899999999999999999999999999999999999999988541 2223333332 1458
Q ss_pred EEEEecccccCCCCCceEEEEe--ecCHHHHHHH----HHh-hccc-CCChHHHHHHHHhhCChHHHHH---HHHHHHHH
Q 019899 166 VHIIYGLSKDLSLPGFRTGVIY--SYNESVLAAA----KKL-TRFC-SISAPTQRLLISMLSDTKFIQE---YLETNKRR 234 (334)
Q Consensus 166 ~~~~~s~sK~~~~~g~r~g~i~--~~~~~~~~~~----~~~-~~~~-~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~ 234 (334)
+++++||||.++++|+|+||++ ..++++++.+ .+. ...+ +.+++.|.++..++++.++.++ ++.+.+++
T Consensus 243 vi~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 322 (404)
T PTZ00376 243 FLVAQSFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGR 322 (404)
T ss_pred EEEEEeCCCcccccccccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999983 2377655543 322 2333 4577899999999987654333 35667788
Q ss_pred HHHHHHHHHHHHHhCC----CcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEE
Q 019899 235 IKKLYDSFVAGLKQLG----IRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCC 310 (334)
Q Consensus 235 ~~~~~~~~~~~l~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~ 310 (334)
++++++.+.+.|++.+ +.+..+.+|+|+|++++ .+++.+|++++||.+.|| + |++
T Consensus 323 ~~~~r~~l~~~L~~~~~~~~~~~~~p~gg~f~~~~~~-----------~~~~~~L~~~~~v~v~p~--------~--Ris 381 (404)
T PTZ00376 323 IQNMRQLLYDELKALGSPGDWEHIINQIGMFSFTGLT-----------KEQVERLIEKYHIYLLDN--------G--RIS 381 (404)
T ss_pred HHHHHHHHHHHHHhcCCCCcccccccCceEEEecCCC-----------HHHHHHHHHhCCEeecCC--------C--eEE
Confidence 9999999999999875 44567899999999874 478889899889999987 1 999
Q ss_pred ecCCCcccHHHHHHHHHHHHH
Q 019899 311 FTSLTHEDIPLVIERIQKVAE 331 (334)
Q Consensus 311 ~~~~~~~~l~~~l~~l~~~~~ 331 (334)
++..++++++.++++|++++.
T Consensus 382 ~~~~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 382 VAGLTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred EeccCHHhHHHHHHHHHHHHh
Confidence 977899999999999999875
No 69
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=9.9e-42 Score=307.96 Aligned_cols=298 Identities=20% Similarity=0.254 Sum_probs=236.4
Q ss_pred hhhhhhhhcCCCCCCCCcE--EEecCcHHHHHHHHHHh--cCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCc
Q 019899 2 AGFMSQVLGQAVSFDPSQI--VLTAGATPAVEILCFCL--ADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNF 77 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i--~~~~g~~~~~~~~~~~l--~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~ 77 (334)
++|+.+..+ ..+++++| ++|+|+++|+..+++.+ +++||+|++++|+|+.+...++ ..|.+++.+|+.+++++
T Consensus 79 a~~~~~~~~--~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~-~~g~~~v~v~~~~~~~~ 155 (396)
T PRK09257 79 QELLFGADS--PALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFE-AAGLEVKTYPYYDAATK 155 (396)
T ss_pred HHHhcCCCC--cccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHH-HcCCcEEEEeccccccC
Confidence 455543211 23478877 99999999999998766 5899999999999999999999 99999999998444567
Q ss_pred cccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccC-CCCcchhhhhh
Q 019899 78 AFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFG-NEEFVSMAEIL 156 (334)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~-~~~~~~~~~~~ 156 (334)
++|++.++++++.. ..+..++++++|+||||.+++.+++++|+++|++|+++||+||+|+++.++ +....++..+.
T Consensus 156 ~~d~~~l~~~~~~~---~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~ 232 (396)
T PRK09257 156 GLDFDAMLADLSQA---PAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFA 232 (396)
T ss_pred ccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHH
Confidence 99999999988742 113466667999999999999999999999999999999999999998874 22234444443
Q ss_pred hccccCCCcEEEEecccccCCCCCceEEEEee--cCHHH----HHHHHHh-h-cccCCChHHHHHHHHhhCChHH---HH
Q 019899 157 EAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYS--YNESV----LAAAKKL-T-RFCSISAPTQRLLISMLSDTKF---IQ 225 (334)
Q Consensus 157 ~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~--~~~~~----~~~~~~~-~-~~~~~~~~~~~~~~~~l~~~~~---~~ 225 (334)
+ ..+++++++||||.++++|+|+||+++ ++++. ++.+... . ...+.+.+.|.++..++...++ ..
T Consensus 233 ~----~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~ 308 (396)
T PRK09257 233 A----AGLELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWE 308 (396)
T ss_pred h----cCCcEEEEEEcCCcCccccccceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHH
Confidence 3 146799999999999988999999973 34443 3333332 2 2344688899999999987643 25
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCC----CcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCC
Q 019899 226 EYLETNKRRIKKLYDSFVAGLKQLG----IRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHC 301 (334)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~l~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~ 301 (334)
+++.+++++++++++.+.+.|++.+ +.+..+.+|+|+|++++ .+++.++++++||.+.|.
T Consensus 309 ~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~~~w~~l~-----------~~~~~~l~~~~~V~~~p~----- 372 (396)
T PRK09257 309 AELEEMRERIKAMRQLLVEALKAKGPSRDFDFIARQRGMFSYSGLT-----------PEQVDRLREEFGVYAVGS----- 372 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccceEEEecCCC-----------HHHHHHHHHcCCEEEcCC-----
Confidence 6778899999999999999999874 66778999999999875 256777788899999872
Q ss_pred CCCCeEEEEecCCCcccHHHHHHHHHHHH
Q 019899 302 IEPGWFRCCFTSLTHEDIPLVIERIQKVA 330 (334)
Q Consensus 302 ~~~~~iRi~~~~~~~~~l~~~l~~l~~~~ 330 (334)
+ |++++..+++++++++++|++++
T Consensus 373 ---~--ri~~~~~~~~~i~~~~~~i~~~~ 396 (396)
T PRK09257 373 ---G--RINVAGLNESNIDYVAEAIAAVL 396 (396)
T ss_pred ---C--eEEEeeCCHHHHHHHHHHHHhhC
Confidence 1 99998789999999999998753
No 70
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.4e-42 Score=305.77 Aligned_cols=287 Identities=22% Similarity=0.288 Sum_probs=237.1
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITAL 84 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l 84 (334)
+++.+++.+++++++|++|+|+++++..++.+++++||.|++++|+|+.+..... ..|.+++.+++..++++.++.+++
T Consensus 70 lr~~ia~~~~~~~~~I~it~G~~~al~~~~~~~~~~gd~V~v~~P~y~~~~~~~~-~~g~~~~~~~l~~~~~~~~~~~~~ 148 (357)
T PRK14809 70 LTAALADRWDVSPEQVWLANGGDGALDYLARAMLDPGDTVLVPDPGFAYYGMSAR-YHHGEVREYPVSKADDFEQTADTV 148 (357)
T ss_pred HHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHH-HcCCeEEEEecccCcCCCcCHHHH
Confidence 5556666677899999999999999999999999999999999999998887777 789999999986556777888777
Q ss_pred HHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCC
Q 019899 85 DQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKD 164 (334)
Q Consensus 85 ~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (334)
.+..+ +++++++++|+||||.++|.+++++++++|++ +++||+||+|.++.+.+. ....+.. .+
T Consensus 149 ~~~~~-------~~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~-~~~iI~De~y~~~~~~~~---~~~~~~~-----~~ 212 (357)
T PRK14809 149 LDAYD-------GERIVYLTSPHNPTGSEIPLDEVEALAERTDE-ETLVVVDEAYGEFAERPS---AVALVEE-----RD 212 (357)
T ss_pred HHhhc-------CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCcc-CcEEEEechhhhccCCch---hHHHHhh-----CC
Confidence 66542 57899999999999999999999999999864 789999999999876431 1222222 57
Q ss_pred cEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHH
Q 019899 165 RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVA 244 (334)
Q Consensus 165 ~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (334)
++++++||||.+|++|+|+||+++ ++++++.+.+....++.+++.|.++..++.. .+++.+.++.++++++.+.+
T Consensus 213 ~vi~~~SfSK~~~~~GlRiG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~----~~~~~~~~~~~~~~r~~l~~ 287 (357)
T PRK14809 213 DVAVLRTFSKAYGLAGLRLGYAVV-PEEWADAYARVNTPFAASELACRAGLAALDD----DEHVERTVETARWAREYIRE 287 (357)
T ss_pred CEEEEecchhHhcCcchhheeeec-CHHHHHHHHHhCCCCCCCHHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999998 7888899888777788899999988888875 34556677788888888988
Q ss_pred HHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHHH
Q 019899 245 GLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIE 324 (334)
Q Consensus 245 ~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l~ 324 (334)
.|+... .+.+|+|+|++++. ..++.+. ++++||.+.||..|+. ++++|++++ ++++++++++
T Consensus 288 ~L~~~~----~~~~g~f~~~~~~~---------~~~~~~~-l~~~gv~v~~g~~f~~--~~~iRls~~--~~~~~~~~l~ 349 (357)
T PRK14809 288 ELDAPT----WESAGNFVLAEVGD---------ASAVAEA-AQERGVIVRDCTSFGL--PECIRITCG--TREETERAVE 349 (357)
T ss_pred HhcCcc----CCCCCCEEEEECCC---------HHHHHHH-HHHCCEEEEECccCCC--CCeEEEecC--CHHHHHHHHH
Confidence 886542 25678899998752 3577777 5668999999999874 579999987 5789999999
Q ss_pred HHHHHHH
Q 019899 325 RIQKVAE 331 (334)
Q Consensus 325 ~l~~~~~ 331 (334)
+|+++++
T Consensus 350 ~L~~~l~ 356 (357)
T PRK14809 350 VLNEVLA 356 (357)
T ss_pred HHHHHhc
Confidence 9999875
No 71
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.2e-41 Score=300.27 Aligned_cols=289 Identities=15% Similarity=0.229 Sum_probs=232.3
Q ss_pred hhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHH
Q 019899 3 GFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSIT 82 (334)
Q Consensus 3 ~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~ 82 (334)
.-+++.+++.+++++++|++|+|+++++..++.. +++| .|++++|+|+.+...++ ..|.+++.+|++. +..|.+
T Consensus 43 ~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~~-~~~~-~vv~~~P~y~~y~~~~~-~~G~~v~~vp~~~---~~~~~~ 116 (332)
T PRK06425 43 TDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLSY-INVG-NIIIVEPNFNEYKGYAF-THGIRISALPFNL---INNNPE 116 (332)
T ss_pred HHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHH-hCCC-cEEEeCCChHHHHHHHH-HcCCeEEEEeCCc---ccCcHH
Confidence 3466777777889999999999999999999974 5676 47777999999999999 9999999999742 344544
Q ss_pred HHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccC
Q 019899 83 ALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVD 162 (334)
Q Consensus 83 ~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (334)
.++ . .+++++++++|+||||.+++.+++++|+++|++++++||+||+|.+|.+.+. .+...+.. .
T Consensus 117 ~l~----~-----~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~--~~~~~~~~----~ 181 (332)
T PRK06425 117 ILN----N-----YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRA--EEDVLLNR----S 181 (332)
T ss_pred HHh----h-----cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccc--hhHHHHhc----c
Confidence 333 2 2789999999999999999999999999999999999999999999886532 23333332 1
Q ss_pred CCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHH
Q 019899 163 KDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSF 242 (334)
Q Consensus 163 ~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 242 (334)
.+++++++||||.+|++|+|+||+++ ++++++.+.+....+..+...+.++. ... .+.+..+.++.++++++++
T Consensus 182 ~~~vi~~~SfSK~~~l~GlRiGy~v~-~~~li~~l~~~~~~~~~~~~~~~~l~----~~~-~~~~~~~~~~~~~~~r~~l 255 (332)
T PRK06425 182 YGNVIIGRSLTKILGIPSLRIGYIAT-DDYNMKISRKITEPWSVCDPAIDFIR----SID-LDYVAKHSLDIMENERSYL 255 (332)
T ss_pred CCCEEEEeecHHhcCCchhhheeeec-CHHHHHHHHHcCCCCccCHHHHHHHH----Hhh-hHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999 78899998887666666655433322 222 2445567788999999999
Q ss_pred HHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHH
Q 019899 243 VAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLV 322 (334)
Q Consensus 243 ~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~ 322 (334)
.+.|++.|+.+..+.+|.|+|++++. +.++.+.|++ +||.+.||..|+...++++|++++ ++++.+++
T Consensus 256 ~~~L~~~g~~~~~~~~g~f~~~~~~~---------~~~~~~~l~~-~gi~v~~~~~f~~~~~~~iRis~~--~~~~~~~l 323 (332)
T PRK06425 256 INNLEAMGFRAAGDPSANFITFMIPD---------AHDFYSYLLK-NGILVRLLDDYECLGEQYIRIAIR--RRSFNIKL 323 (332)
T ss_pred HHHHHHCCCEECCCCCceEEEEEcCC---------HHHHHHHHHH-CCeEEEECCCCCCCCCCEEEEEeC--CHHHHHHH
Confidence 99999988887655577789998861 3578888665 799999999886544689999998 78899999
Q ss_pred HHHHHHHH
Q 019899 323 IERIQKVA 330 (334)
Q Consensus 323 l~~l~~~~ 330 (334)
+++|++++
T Consensus 324 ~~al~~~~ 331 (332)
T PRK06425 324 VNALRNFL 331 (332)
T ss_pred HHHHHHHh
Confidence 99998875
No 72
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.6e-42 Score=306.49 Aligned_cols=295 Identities=19% Similarity=0.298 Sum_probs=240.6
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITAL 84 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l 84 (334)
+++.+++.+++++++|++|+|+++++..++.+++++||.|+++.|+|+.+...++ ..|.+++.++++ .++++|++++
T Consensus 76 lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~vli~~P~y~~~~~~~~-~~g~~~~~v~~~--~~~~~~~~~l 152 (371)
T PRK05166 76 LREAIAARTGVPADRIILGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLHEDYPT-MMGARVERVTVT--PDLGFDLDAL 152 (371)
T ss_pred HHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHH-HcCCeEEEeecC--CCCCCCHHHH
Confidence 4555555667888999999999999999999999999999999999999988888 899999999984 3568999999
Q ss_pred HHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCC
Q 019899 85 DQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKD 164 (334)
Q Consensus 85 ~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (334)
++++++ +++++++++|+||||.++|.+++++|+++|++ +++||+||+|.++.+++. ..+......+ ..+
T Consensus 153 ~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~~-~~~~~~~~~~---~~~ 221 (371)
T PRK05166 153 CAAVAR------APRMLMFSNPSNPVGSWLTADQLARVLDATPP-ETLIVVDEAYAEYAAGDD-YPSALTLLKA---RGL 221 (371)
T ss_pred HHhhhc------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCC-CcEEEEECcHHHhcCCcC-cccHHHHHhh---cCC
Confidence 998876 67999999999999999999999999998864 889999999999886433 2233332221 145
Q ss_pred cEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHH
Q 019899 165 RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVA 244 (334)
Q Consensus 165 ~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (334)
++++++||||.+|++|+|+||++++++++++.+.+....++.+.+.|.++..++... +++++.++.++++++.+.+
T Consensus 222 ~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~~~~~~~~~~~~~~~~q~~~~~~l~~~----~~~~~~~~~~~~~r~~l~~ 297 (371)
T PRK05166 222 PWIVLRTFSKAYGLAGLRVGYGLVSDPELVGLLDRVRTPFNVNGAAQAAALAALDDE----EHLAKGVALALAERERLKK 297 (371)
T ss_pred CEEEEeechHhhhcchhheeeeecCCHHHHHHHHHhccCCCCCHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHHHHH
Confidence 799999999999999999999887688899988877777888999998888887654 3456667788888899999
Q ss_pred HHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHHH
Q 019899 245 GLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIE 324 (334)
Q Consensus 245 ~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l~ 324 (334)
.|++.|+.+ .+.+|+|+|++++. ++.++...|++ +||.+.||..++ .++++|++++ ++++.+++.+
T Consensus 298 ~L~~~g~~~-~p~~g~fl~~~~~~--------~~~~l~~~l~~-~gi~v~p~~~~~--~~~~iRi~~~--~~~~~~~l~~ 363 (371)
T PRK05166 298 ELAEMGYRI-APSRANFLFFDARR--------PASAVAEALLR-QGVIVKPWKQPG--FETFIRVSIG--SPEENDHFVA 363 (371)
T ss_pred HHHHCcCee-CCCcCCEEEEeCCC--------CHHHHHHHHHH-CCeEEecCCCCC--CCCeEEEEcC--CHHHHHHHHH
Confidence 999888875 45567889998753 24678888665 799999987654 3789999998 6667777777
Q ss_pred HHHHHHH
Q 019899 325 RIQKVAE 331 (334)
Q Consensus 325 ~l~~~~~ 331 (334)
.|+.++.
T Consensus 364 ~l~~i~~ 370 (371)
T PRK05166 364 ALDKVLE 370 (371)
T ss_pred HHHHHhh
Confidence 7776653
No 73
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.3e-42 Score=304.95 Aligned_cols=296 Identities=21% Similarity=0.299 Sum_probs=240.7
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCC-CeEEecCCCCCChhhhhhhccCcEEEEEeCCC-CCCccccHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHG-NALLVPSPYYPGFDRDIRFRTGVELIPVHCRS-TDNFAFSIT 82 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~g-d~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~-~~~~~~~~~ 82 (334)
+++.+++.+++++++|++|+|+++++..++.+++++| |+|++++|+|..+...++ ..|.+++.+|+.+ ++++.+|++
T Consensus 64 lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~~d~~ 142 (364)
T PRK04781 64 LRSALAALYGCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAVCAR-LQNAPLVEVPLVDGADGFHADVP 142 (364)
T ss_pred HHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHH-HcCCEEEEEecCCCccCCCcCHH
Confidence 4555666677899999999999999999999999888 799999999998888777 8899999999843 356778999
Q ss_pred HHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccC
Q 019899 83 ALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVD 162 (334)
Q Consensus 83 ~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (334)
++.+.+.. .+++++++++|+||||.+++.+++.+++++|+ ++++||+||+|.+|.+.. +...+.. .
T Consensus 143 ~l~~~~~~-----~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~-~~~~iI~Deay~~f~~~~----~~~~~~~----~ 208 (364)
T PRK04781 143 AIVAAALA-----SNAKLVFLCSPSNPAGSAIALDQIERALQALQ-GKALVVVDEAYGEFSDVP----SAVGLLA----R 208 (364)
T ss_pred HHHHHHhc-----cCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCC-CCcEEEEeCcchhhcCCc----chHHHHh----h
Confidence 98766543 27899999999999999999999999999885 589999999999987532 1222222 1
Q ss_pred CCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHH
Q 019899 163 KDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSF 242 (334)
Q Consensus 163 ~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 242 (334)
.+++++++||||.+|++|+|+||+++ ++++++.+.+....++.+++.|.++..++...++ ++..+..+.++++++.+
T Consensus 209 ~~~vi~~~SfSK~~gl~GlRvGy~v~-~~~l~~~l~~~~~~~~~~~~~~~~a~~~l~~~~~--~~~~~~~~~~~~~r~~l 285 (364)
T PRK04781 209 YDNLAVLRTLSKAHALAAARIGSLIA-NAELIAVLRRCQAPYPVPTPCAALAEQALSAPAL--AVTARRVAEVRAERERL 285 (364)
T ss_pred CCCEEEEecChhhcccccceeeeeeC-CHHHHHHHHhccCCCCCCHHHHHHHHHHHhcccH--HHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999998 8899999998888888999999988888876531 23344555778899999
Q ss_pred HHHHHhC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHH
Q 019899 243 VAGLKQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPL 321 (334)
Q Consensus 243 ~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~ 321 (334)
.+.|+++ ++....|.+|+|+|++++. ..++.+. ++++||.+.||..|+. .++++||+++ ++++.++
T Consensus 286 ~~~L~~~~~~~~~~p~~g~f~~~~~~~---------~~~~~~~-l~~~gI~v~~~~~~~~-~~~~~Ris~~--~~~~~~~ 352 (364)
T PRK04781 286 HAALAQLPGVRRVYPSQGNFLLVRFDD---------AEAAFQA-LLAAGVVVRDQRAAPR-LSDALRITLG--TPEQNDR 352 (364)
T ss_pred HHHHHhCCCCCeECCCCCcEEEEEcCC---------HHHHHHH-HHHCCeEEeeCCCCCC-CCCeEEEeCC--CHHHHHH
Confidence 9999887 6654467778999999863 2466676 5568999999987643 3679999998 7888899
Q ss_pred HHHHHHHHHH
Q 019899 322 VIERIQKVAE 331 (334)
Q Consensus 322 ~l~~l~~~~~ 331 (334)
+++.|+++..
T Consensus 353 l~~al~~~~~ 362 (364)
T PRK04781 353 VLAALQRTQA 362 (364)
T ss_pred HHHHHHHHHh
Confidence 9999987643
No 74
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.7e-42 Score=307.31 Aligned_cols=290 Identities=19% Similarity=0.302 Sum_probs=241.1
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITAL 84 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l 84 (334)
+++.+++.+++++++|++|+|+++++..++.+++++||+|++++|+|+.+...+. ..|.+++.+|+. ++.+|++++
T Consensus 69 lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~v~~~~p~y~~~~~~~~-~~g~~~~~~~~~---~~~~d~~~l 144 (359)
T PRK03158 69 LRTKVAKHLGVDEEQLLFGAGLDEVIQMISRALLNPGTNTVMAEPTFSQYRHNAI-IEGAEVREVPLK---DGGHDLEAM 144 (359)
T ss_pred HHHHHHHHhCCCHHHEEECCCHHHHHHHHHHHHhCCCCEEEEcCCCHHHHHHHHH-HcCCeEEEEecC---CCCcCHHHH
Confidence 4555555667888999999999999999999999999999999999999988888 889999999984 457899999
Q ss_pred HHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCC
Q 019899 85 DQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKD 164 (334)
Q Consensus 85 ~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (334)
++++++ +++++++++|+||||.+++.+++.++++.|. +++++|+||+|.++.+.+.....+..+.. .+
T Consensus 145 ~~~~~~------~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~-----~~ 212 (359)
T PRK03158 145 LKAIDE------QTKIVWICNPNNPTGTYVNHEELLSFLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLEK-----YE 212 (359)
T ss_pred HHhcCC------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCcEEEEECchHhhcCCcccccHHHHHHh-----cC
Confidence 988865 7899999999999999999988888888764 69999999999998875432222222222 57
Q ss_pred cEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHH
Q 019899 165 RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVA 244 (334)
Q Consensus 165 ~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (334)
+++++.||||.+|++|+|+||+++ ++++++.+......++.|++.|.++..+++..++ ..+.++.++++++.+.+
T Consensus 213 ~vi~~~S~SK~~g~~GlRiG~~v~-~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~ 287 (359)
T PRK03158 213 NLIVLRTFSKAYGLAALRVGYGIA-SEELIEKLNIARPPFNTTRIAQYAAIAALEDQAF----LKECVEKNAEGLEQYYA 287 (359)
T ss_pred CEEEEEechHhhcCcchhhehhcC-CHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCHHH----HHHHHHHHHHHHHHHHH
Confidence 899999999999999999999998 8899999988777788899999999999976443 44556667788888889
Q ss_pred HHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHHH
Q 019899 245 GLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIE 324 (334)
Q Consensus 245 ~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l~ 324 (334)
.|++.++.+.++ +|+|+|++++. +..++.+.|++ +||.+.||..|+. ++++|++++ ++++.+++++
T Consensus 288 ~l~~~~~~~~~~-~g~~i~~~~~~--------~~~~~~~~l~~-~gv~v~~g~~f~~--~~~iRi~~~--~~~~~~~l~~ 353 (359)
T PRK03158 288 FCKEYGLFYYPS-QTNFIFVDTGR--------DANELFEALLK-KGYIVRSGAALGF--PTGVRITIG--LKEQNDKIIE 353 (359)
T ss_pred HHHHCCCeeCCC-cCcEEEEECCC--------CHHHHHHHHHH-CCeEEeeCCCCCC--CCeEEEecC--CHHHHHHHHH
Confidence 998888776544 57789998752 24678888664 8999999998863 689999998 8999999999
Q ss_pred HHHHH
Q 019899 325 RIQKV 329 (334)
Q Consensus 325 ~l~~~ 329 (334)
+|+++
T Consensus 354 al~~~ 358 (359)
T PRK03158 354 LLKEL 358 (359)
T ss_pred HHHHh
Confidence 99875
No 75
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.1e-41 Score=303.42 Aligned_cols=295 Identities=18% Similarity=0.305 Sum_probs=239.1
Q ss_pred hhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHH
Q 019899 4 FMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITA 83 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~ 83 (334)
.+++.+++.+++++++|++|+|+++++..++..+ .+|+ +++++|+|..+...++ ..|.+++.+|+.+++++.+| ++
T Consensus 59 ~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~l-~~g~-viv~~P~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~~-~~ 134 (356)
T PRK08056 59 HLHQALARHHQVPASWILAGNGETESIFAVVSGL-KPRR-AMIVTPGFAEYRRALQ-QVGCEIRRYSLREADGWQLT-DA 134 (356)
T ss_pred HHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHh-CCCC-EEEeCCCcHHHHHHHH-HcCCeEEEEecccccCCCcc-HH
Confidence 3455566667789999999999999999999887 5675 7788999999998888 89999999998655666666 45
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCC
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDK 163 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (334)
+++.+++ +++++++++|+||||.+++.+++++|+++|++++++||+||+|.++.+.+..+.+. +.. .
T Consensus 135 ~~~~~~~------~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~--~~~-----~ 201 (356)
T PRK08056 135 ILEALTP------DLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQ--LAD-----N 201 (356)
T ss_pred HHHhccC------CCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHH--hcc-----C
Confidence 5555543 78999999999999999999999999999999999999999999987654322222 211 4
Q ss_pred CcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHH
Q 019899 164 DRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFV 243 (334)
Q Consensus 164 ~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (334)
++++++.|+||++|++|+|+||++++++++++.+++....++.+.+.+.++..++...+ +..+.++.++++++++.
T Consensus 202 ~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~l~~~~----~~~~~~~~~~~~r~~l~ 277 (356)
T PRK08056 202 PHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQQMPWSINAFAALAGEVILQDRA----YQQATWQWLAEEGARFY 277 (356)
T ss_pred CCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCCCCchhHHHHHHHHHHhCCHH----HHHHHHHHHHHHHHHHH
Confidence 68899999999999999999999986678888887766667788888888888886533 34667788899999999
Q ss_pred HHHHhC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHH
Q 019899 244 AGLKQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLV 322 (334)
Q Consensus 244 ~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~ 322 (334)
+.|+++ ++.+..+ +++|+|++++.. ..++...|+ ++||.+.||..|+...++++||+++ ++++.+.+
T Consensus 278 ~~L~~~~~~~~~~~-~~~~~~~~~~~~--------~~~~~~~l~-~~gI~v~~~~~f~~~~~~~iRis~~--~~~~~~~l 345 (356)
T PRK08056 278 QALCALPLLTVWPG-RANYLFLRCERP--------DIDLQRALL-TQRILIRSCANYPGLDSRYYRVAIR--SAAENERL 345 (356)
T ss_pred HHHhcCCCcEEcCC-CCcEEEEEcCCC--------hHHHHHHHH-HCCeEEEECCCCCCCCCCEEEEEEc--CHHHHHHH
Confidence 999887 6665544 678899998742 247888866 4899999999885445679999998 78899999
Q ss_pred HHHHHHHHH
Q 019899 323 IERIQKVAE 331 (334)
Q Consensus 323 l~~l~~~~~ 331 (334)
++.|+++++
T Consensus 346 ~~~l~~~~~ 354 (356)
T PRK08056 346 LAALRNVLT 354 (356)
T ss_pred HHHHHHHHc
Confidence 999988764
No 76
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=4.3e-41 Score=302.83 Aligned_cols=296 Identities=19% Similarity=0.273 Sum_probs=236.5
Q ss_pred CcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 18 SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
++|++|+|+++++..++.+++++||+|++++|+|+.+...+....|.+++.+|+.. +++++|++++++.++... ...
T Consensus 70 ~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~-~~~~~d~~~l~~~~~~~~--~~~ 146 (388)
T PRK08637 70 SLPIVTNALTHGLSLVADLFVDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFD-EDGGFDTDALKEALQAAY--NKG 146 (388)
T ss_pred ceeeEccchHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHhcCCEEEEecccC-CCCcCCHHHHHHHHHhhc--cCC
Confidence 68999999999999999999999999999999999999875425799999999842 334789999999887210 114
Q ss_pred eeEEEEeCCCCCcccCCCHHHHHHHHHHHHh-----cCcEEEEeccccccccCCCCcchhh-hhhhccccCCCcE--EEE
Q 019899 98 VRGILICNPANPVGNIIPRETLYELLDFARE-----KNIHVISDEIYGGSIFGNEEFVSMA-EILEAEEVDKDRV--HII 169 (334)
Q Consensus 98 ~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~-----~~~~vi~D~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~ 169 (334)
..++++++|+||||.+++.+++++|+++|++ |+++||+||+|.++.|++....++. .+.+ ..+++ +++
T Consensus 147 ~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~----~~~~vi~i~~ 222 (388)
T PRK08637 147 KVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALAN----LHSNILAVKL 222 (388)
T ss_pred CEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhc----ccccceEEEe
Confidence 5567888899999999999999999998875 8999999999999998765444432 2222 13564 445
Q ss_pred ecccccCCCCCceEEEEeec-----CHHHHHHHHHh-----h-cccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 170 YGLSKDLSLPGFRTGVIYSY-----NESVLAAAKKL-----T-RFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 170 ~s~sK~~~~~g~r~g~i~~~-----~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
.|+||.++++|+|+||++++ ++++.+.+... . ..++.|.+.|.++..++.+..+ ..+..+.+..++++
T Consensus 223 ~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~-~~~~~~~~~~~~~r 301 (388)
T PRK08637 223 DGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRALNSPEF-DKEKQEKFQILKER 301 (388)
T ss_pred ccccccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhCCHHH-HHHHHHHHHHHHHH
Confidence 69999999999999999964 36777777542 1 2357889999999999987654 45567777789899
Q ss_pred HHHHHHHHHhC----CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCC
Q 019899 239 YDSFVAGLKQL----GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSL 314 (334)
Q Consensus 239 ~~~~~~~l~~~----g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~ 314 (334)
++.+.+.|++. ++.+..+.+|+|+|++++. .++.+++..+++++||.+.+. .++++|++++..
T Consensus 302 ~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~~-------~~~~~l~~~l~~~~gv~~~~~------~~~~iRi~~~~~ 368 (388)
T PRK08637 302 YEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLKG-------VDAEELRVHLLEKYGIGTIAL------NETDLRIAFSCV 368 (388)
T ss_pred HHHHHHHHHhhCCCCCcccccccceEEEEecCCh-------HHHHHHHHHHhhhcceEEEec------cCCceEEEeecC
Confidence 88888888765 5777788999999999973 144688898777789988742 256899999967
Q ss_pred CcccHHHHHHHHHHHHHHcC
Q 019899 315 THEDIPLVIERIQKVAETCK 334 (334)
Q Consensus 315 ~~~~l~~~l~~l~~~~~~~~ 334 (334)
+++++++++++|++++++++
T Consensus 369 ~~~~i~~~~~~l~~~~~~~~ 388 (388)
T PRK08637 369 EEEDIPELFDSIYKAIKDLR 388 (388)
T ss_pred CHHHHHHHHHHHHHHHHhcC
Confidence 89999999999999998765
No 77
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-41 Score=302.76 Aligned_cols=295 Identities=20% Similarity=0.264 Sum_probs=233.2
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCC-eEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcccc
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGN-ALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd-~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
|+|+.++.+..+.+++++|++|+|+++++..++.+++.+|| +|++++|+|+.+...++ ..|.+++.++++ ++++++|
T Consensus 76 a~~~~~~~~~~~~v~~~~I~it~Ga~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~~~~~-~~g~~~~~~~~~-~~~~~~d 153 (374)
T PRK02610 76 AEYVNESAAGSSQITPANISVGNGSDELIRSLLIATCLGGEGSILVAEPTFSMYGILAQ-TLGIPVVRVGRD-PETFEID 153 (374)
T ss_pred HHHhCccccccCCCCHHHEEEcCChHHHHHHHHHHHcCCCCCeEEEcCCChHHHHHHHH-HcCCEEEEecCC-cccCCCC
Confidence 44554433223558899999999999999988888877886 89999999999999998 999999999974 3458999
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++.. ..+++++++++|+||||.+++.++++++.++| ++++||+||+|.+|.+. .....+..
T Consensus 154 ~~~l~~~~~~~~--~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~----~~~~~~~~--- 222 (374)
T PRK02610 154 LAAAQSAIEQTQ--NPPVRVVFVVHPNSPTGNPLTAAELEWLRSLP--EDILVVIDEAYFEFSQT----TLVGELAQ--- 222 (374)
T ss_pred HHHHHHHHHhhc--CCCceEEEEeCCCCCCCCCCCHHHHHHHHhcc--CCcEEEEeccccccCcc----chHHHHhc---
Confidence 999999887411 12789999999999999999999999999876 49999999999987542 12222222
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYD 240 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (334)
.+++++++||||.+|++|+|+||+++ ++++++.+.+....++.+.+.|.++..++...+ .+.+.++...+ .++
T Consensus 223 --~~~~ivi~SfSK~~g~~GlRiG~~v~-~~~l~~~l~~~~~~~~~~~~~q~a~~~~l~~~~---~~~~~~~~~~~-~r~ 295 (374)
T PRK02610 223 --HPNWVILRTFSKAFRLAAHRVGYAIG-HPELIAVLEKVRLPYNLPSFSQLAAQLALEHRQ---ELLAAIPEILQ-ERD 295 (374)
T ss_pred --CCCEEEEEecchhccCcccceeeeec-CHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCHH---HHHHHHHHHHH-HHH
Confidence 46788899999999999999999998 889999998877777889999999988887643 33344444444 467
Q ss_pred HHHHHHHhC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccH
Q 019899 241 SFVAGLKQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDI 319 (334)
Q Consensus 241 ~~~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l 319 (334)
.+.+.|+++ ++.+ .|.+|+|+|++++... +..++.+. ++++||.+.++ ++++|++++ +++++
T Consensus 296 ~l~~~L~~~~~~~~-~p~~g~f~~~~l~~~~------~~~~~~~~-l~~~gi~v~~~-------~~~lRls~~--~~~~~ 358 (374)
T PRK02610 296 RLYQALQELPQLRV-WPSAANFLYLRLSQDA------ALAALHQA-LKAQGTLVRHT-------GGGLRITIG--TPEEN 358 (374)
T ss_pred HHHHHHHhCCCcEe-CCCcceEEEEeCCCCC------CHHHHHHH-HHHCCEEEEeC-------CCeEEEeCC--CHHHH
Confidence 788888776 6654 4778999999998642 33577777 46689999753 468999998 46778
Q ss_pred HHHHHHHHHHHHHc
Q 019899 320 PLVIERIQKVAETC 333 (334)
Q Consensus 320 ~~~l~~l~~~~~~~ 333 (334)
++++++|+++++++
T Consensus 359 ~~~l~~l~~~l~~~ 372 (374)
T PRK02610 359 QRTLERLQAALTQL 372 (374)
T ss_pred HHHHHHHHHHHhhc
Confidence 99999999998765
No 78
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-41 Score=295.87 Aligned_cols=293 Identities=26% Similarity=0.427 Sum_probs=248.9
Q ss_pred hhhhhcCCCC-CCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHH
Q 019899 5 MSQVLGQAVS-FDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITA 83 (334)
Q Consensus 5 ~~~~~~~~~~-~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~ 83 (334)
+++.++..++ +++++|++++|+.+.+..++++++.+||+|+++.|+|..|...++ ..|.+++.++.. + +.+|++.
T Consensus 62 l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~~~~~~gd~vl~~~Ptf~~Y~~~a~-~~g~~~~~v~~~--~-~~~d~~~ 137 (356)
T COG0079 62 LRAALAEYYGVVDPENVLVGNGSDELIELLVRAFVEPGDTVLIPEPTFSMYEIAAQ-LAGAEVVKVPLK--E-FRLDLDA 137 (356)
T ss_pred HHHHHHHHhCCCCcceEEEcCChHHHHHHHHHHhhcCCCEEEEcCCChHHHHHHHH-hcCCeEEEeccc--c-cccCHHH
Confidence 4455555566 788999999999999999999999999999999999999999999 999999999984 3 8999999
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCC
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDK 163 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (334)
+.+++++ ++++|++||||||||..++.++++++++.+.+ +.+|++||+|.+|.- .+...+.. ..
T Consensus 138 ~~~~~~~------~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~-~~~vVvDEAY~eF~~-----~~~~~l~~----~~ 201 (356)
T COG0079 138 ILAAIRD------KTKLVFLCNPNNPTGTLLPREELRALLEALPE-GGLVVIDEAYIEFSP-----ESSLELLK----YP 201 (356)
T ss_pred HHHhhhc------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCC-CcEEEEeCchhhcCC-----chhhhhcc----CC
Confidence 9999987 79999999999999999999999999999888 999999999998664 22222221 17
Q ss_pred CcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHH
Q 019899 164 DRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFV 243 (334)
Q Consensus 164 ~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (334)
++++++.||||.+|++|+|+||+++ ++++++.+.+.+.+|+.|.+++.++.+++.+. +++.+..+.+.+.++++.
T Consensus 202 ~nlivlRTfSKa~gLAGlRlGy~ia-~~~~i~~l~~vr~p~~v~~~a~~aa~aal~~~----~~~~~~~~~~~~~r~rl~ 276 (356)
T COG0079 202 PNLIVLRTFSKAFGLAGLRVGYAIA-NPELIAALNKVRPPFNVSSPALAAAIAALRDA----DYLEESVERIREERERLY 276 (356)
T ss_pred CCEEEEEecHHhhhcchhceeeccC-CHHHHHHHHHhcCCCCCCHHHHHHHHHHcccH----HHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999998 99999999999999999999999999999885 456778889999999999
Q ss_pred HHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHH
Q 019899 244 AGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVI 323 (334)
Q Consensus 244 ~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l 323 (334)
+.|+.+|+.-+.|....|++++++.. . +..+.+.|++ +||.++.... ....++++|++++ ++++.++++
T Consensus 277 ~~l~~~~~~~v~pS~aNFvlv~~~~~------~-~~~l~~~L~~-~giivR~~~~-~~~~~~~lRitvg--t~een~~ll 345 (356)
T COG0079 277 AALKALGLFGVFPSQANFVLVRVPDA------E-AAALAEALLK-KGILVRDCSS-VGLLPGYLRITVG--TPEENDRLL 345 (356)
T ss_pred HHHHhCCCCeecCCCCcEEEEECCCc------c-HHHHHHHHHH-CCEEEEeCCC-CCCCCCeEEEEeC--CHHHHHHHH
Confidence 99999985523344466677888861 1 2467777555 7999998765 3334679999999 888889999
Q ss_pred HHHHHHHHHc
Q 019899 324 ERIQKVAETC 333 (334)
Q Consensus 324 ~~l~~~~~~~ 333 (334)
++|+++++..
T Consensus 346 ~AL~~~~~~~ 355 (356)
T COG0079 346 AALREVLKGL 355 (356)
T ss_pred HHHHHHHhcc
Confidence 9999988753
No 79
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=4.9e-41 Score=299.36 Aligned_cols=288 Identities=24% Similarity=0.370 Sum_probs=231.6
Q ss_pred ChhhhhhhhcCCCC-CCCCcEEEecCcHHHHHHHHHHh-cCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcc
Q 019899 1 MAGFMSQVLGQAVS-FDPSQIVLTAGATPAVEILCFCL-ADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFA 78 (334)
Q Consensus 1 i~~~~~~~~~~~~~-~~~~~i~~~~g~~~~~~~~~~~l-~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~ 78 (334)
+++|+.++.+ +. +++++|++|+|+++++..++..+ +++||.|++++|+|+.+...++ ..|.+++.++
T Consensus 65 ia~~~~~~~~--~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~v~-------- 133 (357)
T TIGR03539 65 IVDWLERRRG--VPGLDPTAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGAL-LAGATPVAAD-------- 133 (357)
T ss_pred HHHHHHHhcC--CCCCCcCeEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHH-hcCCEEeccC--------
Confidence 3566666555 54 88999999999999999998887 7999999999999999998888 8899887774
Q ss_pred ccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhc
Q 019899 79 FSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEA 158 (334)
Q Consensus 79 ~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~ 158 (334)
+++.+. + .+++++++++|+||||.++|.+++++|+++|+++|+++|+||+|.++.+.+..... +...
T Consensus 134 -~~~~l~----~-----~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~---~~~~ 200 (357)
T TIGR03539 134 -DPTELD----P-----VGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSI---LDPR 200 (357)
T ss_pred -ChhhcC----c-----cCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccc---eecc
Confidence 122222 1 27899999999999999999999999999999999999999999988876532211 1110
Q ss_pred -cccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHH
Q 019899 159 -EEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDTKFIQEYLETNKRRI 235 (334)
Q Consensus 159 -~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 235 (334)
...+.+++++++||||.++++|+|+||+++ ++++++.+.+... .++.+.+.|.++..++... .+..+.++.+
T Consensus 201 ~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~-~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~----~~~~~~~~~~ 275 (357)
T TIGR03539 201 VCGGDHTGLLAVHSLSKRSNLAGYRAGFVAG-DPALVAELLTVRKHAGLMVPAPVQAAMVAALGDD----GHVAEQKARY 275 (357)
T ss_pred cCCCccccEEEEeccccccCCCceeEEEEec-CHHHHHHHHHHHhhcccCCCHHHHHHHHHHcCCH----HHHHHHHHHH
Confidence 001246799999999999999999999998 7888888876543 3567889999999998763 3346677888
Q ss_pred HHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCC
Q 019899 236 KKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLT 315 (334)
Q Consensus 236 ~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~ 315 (334)
+++++.+.+.|++.|+.+..+.+|+++|++++. +..++... ++++||.+.||..|+...++++|++++ .+
T Consensus 276 ~~~~~~~~~~L~~~g~~~~~p~~~~~~~~~~~~--------~~~~~~~~-l~~~gV~v~pg~~f~~~~~~~iRis~~-~~ 345 (357)
T TIGR03539 276 AARRAQLKPALEKAGFRIDHSEAGLYLWATRGE--------DAWDTVDR-LAELGILVAPGDFYGPAGSQHVRVALT-AT 345 (357)
T ss_pred HHHHHHHHHHHHHcCCCCcCCCccEEEEEECCC--------CHHHHHHH-HHhCCEEECCccccCCCCCCeEEEEec-CC
Confidence 899999999999889888889999999998753 23467766 566899999999887655689999999 47
Q ss_pred cccHHHHHHHHH
Q 019899 316 HEDIPLVIERIQ 327 (334)
Q Consensus 316 ~~~l~~~l~~l~ 327 (334)
++++++++++|+
T Consensus 346 ~~~i~~~~~~l~ 357 (357)
T TIGR03539 346 DERIAAAVARLT 357 (357)
T ss_pred HHHHHHHHHhhC
Confidence 788998888763
No 80
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=5.2e-41 Score=299.69 Aligned_cols=293 Identities=20% Similarity=0.295 Sum_probs=228.5
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCc---cccH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNF---AFSI 81 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~---~~~~ 81 (334)
+++.+++.+++++++|++|+|+++++..++.++. +||.|++++|+|+.+...++ ..|.+++.+++++++++ ..++
T Consensus 62 Lr~aia~~~~v~~~~I~it~G~~~~i~~~~~~l~-~g~~vlv~~P~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~~~~~~ 139 (360)
T PRK07392 62 LRLALAQHHQLPPEWILPGNGAAELLTWAGRELA-QLRAVYLITPAFGDYRRALR-AFGATVKELPLPLDQPSPGLTLRL 139 (360)
T ss_pred HHHHHHHHhCcChhhEEECCCHHHHHHHHHHHhC-CCCeEEEECCCcHHHHHHHH-HcCCeEEEEecccccCCcccccCH
Confidence 4555666667899999999999999999998875 68899999999999999999 89999999998654443 2344
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
+++++.. .+++++++++|+||||.+++.++ |.++++++++ +|+||+|.+|.+++. ..+......
T Consensus 140 ~~~~~~~-------~~~~~~~l~nP~NPTG~~~~~~~---l~~l~~~~~~-~IiDE~y~~~~~~~~-~~s~~~~~~---- 203 (360)
T PRK07392 140 QTLPPQL-------TPNDGLLLNNPHNPTGKLWSREA---ILPLLEQFAL-VVVDEAFMDFLPPDA-EQSLIPCLA---- 203 (360)
T ss_pred HHHHHhc-------cCCCEEEEeCCCCCCCCCcCHHH---HHHHHHHCCE-EEEECchhhhccCcc-ccchHHHhh----
Confidence 5444322 26789999999999999999554 5555667786 666999999987653 223322222
Q ss_pred CCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDS 241 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 241 (334)
..+++++++||||.+|++|+|+||+++ ++++++.+......++.|.+.|.++..++++.++ ....++.+++++++
T Consensus 204 ~~~~vi~i~S~SK~~~l~GlRiG~~v~-~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~----~~~~~~~~~~~r~~ 278 (360)
T PRK07392 204 EYPNLIILRSLTKFYSLPGLRLGYAIA-HPDRLQRWQQWRDPWPVNGLAAAAAIAALADRDF----QQQTWAWLPPAREA 278 (360)
T ss_pred cCCCEEEEEechhhhcCCchheeeeeC-CHHHHHHHHhhCCCCCCCHHHHHHHHHHhccHHH----HHHHHHHHHHHHHH
Confidence 157899999999999999999999998 7888888887776688999999999999987443 34455668888899
Q ss_pred HHHHHHhC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHH
Q 019899 242 FVAGLKQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIP 320 (334)
Q Consensus 242 ~~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~ 320 (334)
+.+.|+.+ |+.+.. .+++|+|++++. ++.++...+++++||.+.||..|+...++++||+++ ++++.+
T Consensus 279 l~~~L~~~~~~~~~~-~~~~fl~~~~~~--------~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~~ 347 (360)
T PRK07392 279 LFQGLASLPGLTPLP-SAANFLLVQSQG--------SALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVR--TEAENQ 347 (360)
T ss_pred HHHHHHhCCCcEECC-CCCCEEEEEcCC--------CHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeC--CHHHHH
Confidence 99999876 666544 678899998864 246788887888999999999997655689999998 455556
Q ss_pred HHHHHHHHHHH
Q 019899 321 LVIERIQKVAE 331 (334)
Q Consensus 321 ~~l~~l~~~~~ 331 (334)
++.+.|.+++.
T Consensus 348 ~l~~al~~~~~ 358 (360)
T PRK07392 348 RLLEALAAILA 358 (360)
T ss_pred HHHHHHHHHhh
Confidence 66666666554
No 81
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.9e-41 Score=301.81 Aligned_cols=289 Identities=20% Similarity=0.293 Sum_probs=237.1
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITAL 84 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l 84 (334)
+++.+++.+++++++|++|+|+++++..++.+++++||+|++++|+|+.|...++ ..|.+++.++. ++++.+|++++
T Consensus 91 lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~~~~~~~~gd~Vlv~~P~y~~y~~~~~-~~g~~~~~v~~--~~~~~~d~~~l 167 (380)
T PLN03026 91 LRAALAEDSGLESENILVGCGADELIDLLMRCVLDPGDKIIDCPPTFGMYVFDAA-VNGAEVIKVPR--TPDFSLDVPRI 167 (380)
T ss_pred HHHHHHHHhCcChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHH-HcCCEEEEeec--CCCCCcCHHHH
Confidence 5566666677899999999999999999999999999999999999998888887 88999999997 34578999999
Q ss_pred HHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCC
Q 019899 85 DQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKD 164 (334)
Q Consensus 85 ~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (334)
+++++. .+++++++++|+||||.+++.+++.++++.+ ++||+||+|.+|.+.+. . ...+.. .+
T Consensus 168 ~~~~~~-----~~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~----~~vi~DeaY~~~~~~~~-~--~~~~~~-----~~ 230 (380)
T PLN03026 168 VEAVET-----HKPKLLFLTSPNNPDGSIISDDDLLKILELP----ILVVLDEAYIEFSTQES-R--MKWVKK-----YD 230 (380)
T ss_pred HHHHhc-----cCCcEEEEeCCCCCCCCCCCHHHHHHHHhcC----CEEEEECcchhhcCCcc-h--HHHHHh-----CC
Confidence 998843 2789999999999999999988887777643 89999999998876432 1 111222 67
Q ss_pred cEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHH
Q 019899 165 RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVA 244 (334)
Q Consensus 165 ~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (334)
+++++.||||.+|++|+|+||+++ ++++++.+.+....++.+.++|.++..++...+ ++.+.++.++++++++.+
T Consensus 231 ~viv~~SfSK~~glaGlRiGy~~~-~~~~i~~l~~~~~~~~~~~~~q~aa~~aL~~~~----~~~~~~~~~~~~r~~l~~ 305 (380)
T PLN03026 231 NLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALSNPK----YLEDVKNALVEERERLFG 305 (380)
T ss_pred CEEEEecchHhhcCccccceeeec-CHHHHHHHHHhcCCCCCCHHHHHHHHHHhhCHH----HHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999998 888999998887778899999999999987643 456677888999999999
Q ss_pred HHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHHH
Q 019899 245 GLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIE 324 (334)
Q Consensus 245 ~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l~ 324 (334)
.|+++++....+.+++|+|++++... ++.++...|+ ++||.++++..++ .++++||+++ ++++.+++++
T Consensus 306 ~L~~~~~~~~~p~~~~f~~~~~~~~~------~~~~~~~~l~-~~gI~v~~~~~~~--~~~~lRis~~--~~~~~~~l~~ 374 (380)
T PLN03026 306 LLKEVPFLEPYPSDANFILCRVTSGR------DAKKLKEDLA-KMGVMVRHYNSKE--LKGYIRVSVG--KPEHTDALME 374 (380)
T ss_pred HHHHCCCCeECCCCCeEEEEECCCCC------CHHHHHHHHH-HCCeEEEECCCCC--CCCEEEEecC--CHHHHHHHHH
Confidence 99988643346678889999987532 3467888866 6899999876532 3679999998 6778888888
Q ss_pred HHHHH
Q 019899 325 RIQKV 329 (334)
Q Consensus 325 ~l~~~ 329 (334)
.|+++
T Consensus 375 al~~~ 379 (380)
T PLN03026 375 ALKQL 379 (380)
T ss_pred HHHHh
Confidence 88753
No 82
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.4e-41 Score=300.09 Aligned_cols=295 Identities=20% Similarity=0.262 Sum_probs=242.6
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITAL 84 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l 84 (334)
+++.+++.+++++++|++|+|+++++..++.+++++||.|++++|+|+.+...+. ..|.+++.+|++ +..+|++++
T Consensus 72 Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~~~~~~gd~vlv~~p~y~~~~~~~~-~~g~~~~~vp~~---~~~~~~~~l 147 (369)
T PRK08153 72 LRHALAAHHGVAPENIMVGEGIDGLLGLIVRLYVEPGDPVVTSLGAYPTFNYHVA-GFGGRLVTVPYR---DDREDLDAL 147 (369)
T ss_pred HHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEECCCcchHHHHHHH-HcCCeEEEeeCC---CCCCCHHHH
Confidence 4555666667889999999999999999999999999999999999999998888 889999999973 235788888
Q ss_pred HHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCC
Q 019899 85 DQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKD 164 (334)
Q Consensus 85 ~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (334)
++.+.+. +++++++++|+||||.++|.+++.+++++|+ ++++||+||+|..+.+++. ..++. . ..+
T Consensus 148 ~~~~~~~-----~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~-~~~~lI~DE~y~~~~~~~~-~~~~~---~----~~~ 213 (369)
T PRK08153 148 LDAARRE-----NAPLVYLANPDNPMGSWHPAADIVAFIEALP-ETTLLVLDEAYCETAPAGA-APPID---T----DDP 213 (369)
T ss_pred HHHhccc-----CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCcEEEEeCchhhhcCccc-chhhh---h----cCC
Confidence 8776542 7899999999999999999999999999887 5999999999999876542 22222 1 156
Q ss_pred cEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHH
Q 019899 165 RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVA 244 (334)
Q Consensus 165 ~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (334)
+++++.||||.+|++|+|+||+++ ++++++.+.+....++.+++.|.++..++++. +++.+.++.++++++.+.+
T Consensus 214 ~~i~~~SfSK~~g~~GlRiG~~v~-~~~~~~~l~~~~~~~~~s~~~q~~~~~~l~~~----~~~~~~~~~~~~~r~~~~~ 288 (369)
T PRK08153 214 NVIRMRTFSKAYGLAGARVGYAIG-APGTIKAFDKVRNHFGMNRIAQAAALAALKDQ----AYLAEVVGKIAAARDRIAA 288 (369)
T ss_pred CEEEEecchHhccCcchheeeeec-CHHHHHHHHHhhcCCCCCHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999998 88899999887777889999999999999753 3456678888899999999
Q ss_pred HHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEc-CCCCcCCCCCCeEEEEecCCCcccHHHHH
Q 019899 245 GLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVT-PGSACHCIEPGWFRCCFTSLTHEDIPLVI 323 (334)
Q Consensus 245 ~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~-~g~~~~~~~~~~iRi~~~~~~~~~l~~~l 323 (334)
.|++.|+... +.+++|+|++++... ..+.++.+.|++ +||.+. |+... .++++|++++ ++++++.++
T Consensus 289 ~L~~~g~~~~-p~~~~f~~~~~~~~~-----~~a~~l~~~l~~-~Gi~v~~p~~~~---~~~~iRis~~--~~~~~~~~~ 356 (369)
T PRK08153 289 IARANGLTPL-PSATNFVAIDCGRDG-----AFARAVLDGLIA-RDIFVRMPGVAP---LDRCIRVSCG--PDEELDLFA 356 (369)
T ss_pred HHHHCCCccC-CCcCcEEEEECCCCc-----ccHHHHHHHHHH-CCeEEeeCCCCC---CCCeEEEecC--CHHHHHHHH
Confidence 9998888644 567889999886311 234577777554 799995 66422 2579999998 789999999
Q ss_pred HHHHHHHHHcC
Q 019899 324 ERIQKVAETCK 334 (334)
Q Consensus 324 ~~l~~~~~~~~ 334 (334)
+.|+++++.++
T Consensus 357 ~al~~~~~~~~ 367 (369)
T PRK08153 357 EALPEALEAAR 367 (369)
T ss_pred HHHHHHHHHhh
Confidence 99999987653
No 83
>PLN02368 alanine transaminase
Probab=100.00 E-value=4.9e-41 Score=301.37 Aligned_cols=266 Identities=23% Similarity=0.386 Sum_probs=220.0
Q ss_pred ChhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc-CCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccc
Q 019899 1 MAGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLA-DHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~-~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~ 79 (334)
||+|+.++.+ +.+++++|++|+|+++++..++.+++ ++||.|++++|+|+.|...+. ..|.+++.+++.++++|++
T Consensus 116 ia~~~~~~~g--~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~~~~-~~g~~~v~v~~~~~~~~~~ 192 (407)
T PLN02368 116 VAEFIERRDG--YPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSATIS-LLGGTLVPYYLEESENWGL 192 (407)
T ss_pred HHHHHHHhcC--CCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHHHHH-HcCCEEEEEecccccCCCC
Confidence 4667766555 66889999999999999999999987 799999999999999999998 8999999999876677899
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCC-Ccchhhhhhhc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNE-EFVSMAEILEA 158 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~ 158 (334)
|++.+++++++...++.+++++++++|+||||.+++.+++++|+++|++|+++||+||+|..+.|++. .+.++..+...
T Consensus 193 d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~ 272 (407)
T PLN02368 193 DVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMD 272 (407)
T ss_pred CHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcccHHHHHhh
Confidence 99999999986443444789999999999999999999999999999999999999999999998764 44555544221
Q ss_pred --cccC-CCcEEEEecccccC-CCCCceEEEEee--cCHHHHHHHHHhh-cccCCChHHHHHHHHhhCChH----H---H
Q 019899 159 --EEVD-KDRVHIIYGLSKDL-SLPGFRTGVIYS--YNESVLAAAKKLT-RFCSISAPTQRLLISMLSDTK----F---I 224 (334)
Q Consensus 159 --~~~~-~~~~~~~~s~sK~~-~~~g~r~g~i~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~----~---~ 224 (334)
+..+ .+++++++||||.+ +++|+|+||+++ .++++++.+.+.. ..++.+++.|.++..++...+ . .
T Consensus 273 ~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~~~~~~~~~~~Q~aa~~~l~~~~~~~~~~~~~ 352 (407)
T PLN02368 273 MGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVASIALSPNVSGQIFMGLMVNPPKPGDISYDQF 352 (407)
T ss_pred hcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHhcccCCCCcHHHHHHHHHhCCCCCCCccHHHH
Confidence 0011 35899999999998 899999999994 3778888887753 346788899999999987431 1 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCceeEEeeecCCc
Q 019899 225 QEYLETNKRRIKKLYDSFVAGLKQL-GIRCSESSAGLYCWADMSGL 269 (334)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~g~~~~~~~~~~ 269 (334)
.+...++.+.++++++.+.+.|.++ |+.+..|+|+||+|++++-+
T Consensus 353 ~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~Gafy~~~~i~lp 398 (407)
T PLN02368 353 VRESKGILESLRRRARMMTDGFNSCKNVVCNFTEGAMYSFPQIKLP 398 (407)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCCeeeEeccCCCCC
Confidence 2223557889999999999999997 89999999999999877643
No 84
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-41 Score=302.28 Aligned_cols=288 Identities=23% Similarity=0.340 Sum_probs=235.9
Q ss_pred hhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCC-CeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHH
Q 019899 4 FMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHG-NALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSIT 82 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~g-d~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~ 82 (334)
-+++.+++.+++++++|++|+|+++++..++.+++++| |+|+++.|+|+.|...++ ..|.+++.++++ +++.+|++
T Consensus 61 ~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~~~~~-~~G~~~~~v~~~--~~~~~d~~ 137 (351)
T PRK01688 61 AVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAE-TIGVEIRTVPTL--DNWQLDLP 137 (351)
T ss_pred HHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHHHHHH-HcCCEEEEeecC--CCCCCCHH
Confidence 34455555567899999999999999999999999887 899999999999999888 899999999984 45789999
Q ss_pred HHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccC
Q 019899 83 ALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVD 162 (334)
Q Consensus 83 ~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (334)
++++++ + +++++++++|+||||.+++.++++++++.|++ +.+||+||+|.+|... .+...+..+
T Consensus 138 ~l~~~~-~------~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~-~~~vivDEay~~f~~~----~s~~~~~~~---- 201 (351)
T PRK01688 138 AIADNL-D------GVKVVYVCSPNNPTGNLINPQDLRTLLELTRG-KAIVVADEAYIEFCPQ----ASLAGWLAE---- 201 (351)
T ss_pred HHHHhc-c------CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCC-CcEEEEECchhhcCCC----CChHHHHhh----
Confidence 999877 3 68999999999999999999999999999876 6889999999987632 122233221
Q ss_pred CCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHH
Q 019899 163 KDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSF 242 (334)
Q Consensus 163 ~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 242 (334)
.++++++.||||.+|++|+|+||+++ ++++++.+.+....++.+.+.+.++..++.... .+++.+.++.+.++++++
T Consensus 202 ~~n~iv~rSfSK~~glaGlRiGy~i~-~~~~i~~l~~~~~~~~v~~~~~~~a~~~L~~~~--~~~~~~~~~~~~~~r~~l 278 (351)
T PRK01688 202 YPHLVILRTLSKAFALAGLRCGFTLA-NEEVINLLLKVIAPYPLSTPVADIAAQALSPQG--IAAMRERVAEINANRQWL 278 (351)
T ss_pred CCCEEEEecchHhhcCHHHHHhHHhC-CHHHHHHHHhccCCCCCCHHHHHHHHHHHhcch--HHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999999998 889999998888888889888888888876532 245566777888889999
Q ss_pred HHHHHhC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHH
Q 019899 243 VAGLKQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPL 321 (334)
Q Consensus 243 ~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~ 321 (334)
.+.|+++ ++....|.++.|+|++++. +.++.+.|+ ++||.++++..+. ..++++|++++ +++++++
T Consensus 279 ~~~L~~~~~~~~~~ps~~nfi~~~~~~---------~~~l~~~L~-~~gi~vr~~~~~~-~~~~~iRis~~--~~~e~~~ 345 (351)
T PRK01688 279 IAALKEIPCVEQVFDSETNYILARFTA---------SSAVFKSLW-DQGIILRDQNKQP-GLSNCLRITIG--TREECQR 345 (351)
T ss_pred HHHHHhCCCCCeECCCCCcEEEEEcCC---------HHHHHHHHH-HCCeEEEECCCcC-CCCCeEEEeCC--CHHHHHH
Confidence 9999887 5654556677889998862 357888865 5899999765442 23679999998 7899999
Q ss_pred HHHHH
Q 019899 322 VIERI 326 (334)
Q Consensus 322 ~l~~l 326 (334)
+++.|
T Consensus 346 l~~al 350 (351)
T PRK01688 346 VIDAL 350 (351)
T ss_pred HHHhh
Confidence 98876
No 85
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=6.9e-41 Score=300.11 Aligned_cols=294 Identities=18% Similarity=0.295 Sum_probs=244.9
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITAL 84 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l 84 (334)
+++.+++.+++++++|++|+|+++++..++.+++++||.|++++|+|..+...+. ..|.+++.++. +++.+|++.+
T Consensus 72 lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~l~~~gd~vl~~~p~y~~~~~~~~-~~g~~~~~~~~---~~~~~~~~~l 147 (367)
T PRK02731 72 LKAALAEKFGVDPERIILGNGSDEILELLARAYLGPGDEVIYSEHGFAVYPIAAQ-AVGAKPVEVPA---KDYGHDLDAM 147 (367)
T ss_pred HHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEecCCHHHHHHHHH-HcCCeEEEecc---cCCCCCHHHH
Confidence 5555666667888999999999999999999999999999999999998888777 89999999986 5578999999
Q ss_pred HHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCC
Q 019899 85 DQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKD 164 (334)
Q Consensus 85 ~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (334)
++++++ ++++|++++|+||||.+++.+++.++++.|+ +++++|+||+|..+.+.+.....+..+.. .+
T Consensus 148 ~~~~~~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~~~~~~-----~~ 215 (367)
T PRK02731 148 LAAVTP------RTRLVFIANPNNPTGTYLPAEEVERFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGLELVAK-----FP 215 (367)
T ss_pred HHHhCC------CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCC-CCcEEEEECcHHHhccCcCcccHHHHHhh-----cC
Confidence 998874 7899999999999999999999988888775 69999999999988875433333322222 57
Q ss_pred cEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHH
Q 019899 165 RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVA 244 (334)
Q Consensus 165 ~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (334)
++++++|+||.+|++|+|+||+++ ++++++.+.+....+..++++|.++..+++.. ++.++.++.++++++.+.+
T Consensus 216 ~~i~~~S~SK~~g~~G~RiG~l~~-~~~~~~~l~~~~~~~~~~~~~~~~a~~~l~~~----~~~~~~~~~~~~~~~~l~~ 290 (367)
T PRK02731 216 NVVVTRTFSKAYGLAGLRVGYGIA-PPEIIDALNRVRQPFNVNSLALAAAVAALDDD----AFVEKSRALNAEGMAWLTE 290 (367)
T ss_pred CEEEEeeehHhhcCcccceeeeeC-CHHHHHHHHHccCCCCCCHHHHHHHHHHhCCH----HHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999998 88899999887777788999999999999763 3456677788888999999
Q ss_pred HHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHHH
Q 019899 245 GLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIE 324 (334)
Q Consensus 245 ~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l~ 324 (334)
.|++.|+.+. +.+|+++|++++... ++.++.+.|. ++||.+.|+..|+ .++++|++++ ++++++++++
T Consensus 291 ~L~~~g~~~~-~~~g~~~~i~~~~~~------~~~~~~~~L~-~~gI~v~~~~~~~--~~~~iRis~~--~~~e~~~l~~ 358 (367)
T PRK02731 291 FLAELGLEYI-PSVGNFILVDFDDGK------DAAEAYQALL-KRGVIVRPVAGYG--LPNALRITIG--TEEENRRFLA 358 (367)
T ss_pred HHHHCCCccC-CCCceEEEEECCCCC------CHHHHHHHHH-HCCEEEEeCCCCC--CCCeEEEecC--CHHHHHHHHH
Confidence 9998888776 456788999986432 3467888855 5899999988775 2579999998 7889999999
Q ss_pred HHHHHHH
Q 019899 325 RIQKVAE 331 (334)
Q Consensus 325 ~l~~~~~ 331 (334)
.|+++++
T Consensus 359 aL~~~~~ 365 (367)
T PRK02731 359 ALKEFLA 365 (367)
T ss_pred HHHHHHh
Confidence 9999875
No 86
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=9.6e-41 Score=298.94 Aligned_cols=291 Identities=22% Similarity=0.305 Sum_probs=237.7
Q ss_pred ChhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcccc
Q 019899 1 MAGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
||+|+.+..+ +++++++|++|+|+++++..++.+++++||.|+++.|+|+.+...++ ..|.+++.++. ++++.+|
T Consensus 74 ia~~~~~~~~--~~~~~~~I~it~G~~~~l~~~~~~~~~~gd~v~v~~P~y~~~~~~~~-~~g~~~~~~~~--~~~~~~d 148 (368)
T PRK03317 74 LAAYLTAQTG--VGLTVENVWAANGSNEILQQLLQAFGGPGRTALGFVPSYSMHPIIAR-GTHTEWVEGPR--AADFTLD 148 (368)
T ss_pred HHHHhhhhcc--CCCChhhEEECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHH-hcCCeeEEccc--CCCCCCC
Confidence 3566666555 57899999999999999999999999999999999999999999888 88988888876 4567899
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++. +++++++++|+||||.+++.+++++|+++| ++++|+||+|+++.+.+.. +...+.+.
T Consensus 149 ~~~l~~~~~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~---~~~lI~DE~y~~~~~~~~~--~~~~~~~~-- 216 (368)
T PRK03317 149 VDAAVAAIAEH-----RPDVVFLTSPNNPTGTALPLDDVEAILDAA---PGIVVVDEAYAEFRRSGTP--SALTLLPE-- 216 (368)
T ss_pred HHHHHHHHhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHHC---CceEEEeCCchhhcccCCc--CHHHHHHh--
Confidence 99999998752 688999999999999999988887777766 7999999999998765432 22333221
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYD 240 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (334)
.++++++.||||.+|++|+|+||+++ ++++++.++.....++.+++.|.++..++...+. ..+..+++.++++
T Consensus 217 --~~~~i~~~SfSK~~g~~GlRiG~~~~-~~~~~~~l~~~~~~~~~s~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~ 289 (368)
T PRK03317 217 --YPRLVVSRTMSKAFAFAGGRLGYLAA-APAVVDALRLVRLPYHLSAVTQAAARAALRHADE----LLASVAALRAERD 289 (368)
T ss_pred --CCCEEEEEechhhhccchhhhhhhhC-CHHHHHHHHhcCCCCCCCHHHHHHHHHHhhCHHH----HHHHHHHHHHHHH
Confidence 45889999999999999999999998 8899999987777788899999999888876332 2334456788888
Q ss_pred HHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHH
Q 019899 241 SFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIP 320 (334)
Q Consensus 241 ~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~ 320 (334)
.+.+.|++.|+.+..+.+++++|.+++ +..++...|+ ++||.+.+.. .++++|++++ ++++++
T Consensus 290 ~l~~~L~~~g~~~~~~~~~~~~~~~~~---------~~~~~~~~l~-~~Gv~v~~~~-----~~~~iRi~~~--~~~~~~ 352 (368)
T PRK03317 290 RVVAWLRELGLRVAPSDANFVLFGRFA---------DRHAVWQGLL-DRGVLIRDVG-----IPGWLRVTIG--TPEEND 352 (368)
T ss_pred HHHHHHHHCCCEeCCCCCcEEEEeccC---------CHHHHHHHHH-HCCEEEEeCC-----CCCeEEEecC--CHHHHH
Confidence 999999998998888888988876653 2356777744 5899998642 2579999998 778899
Q ss_pred HHHHHHHHHHHH
Q 019899 321 LVIERIQKVAET 332 (334)
Q Consensus 321 ~~l~~l~~~~~~ 332 (334)
++++.++++++.
T Consensus 353 ~~~~~l~~~~~~ 364 (368)
T PRK03317 353 AFLAALAEVLAT 364 (368)
T ss_pred HHHHHHHHHHHH
Confidence 999999988754
No 87
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=1.3e-40 Score=302.91 Aligned_cols=306 Identities=19% Similarity=0.267 Sum_probs=233.3
Q ss_pred ChhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcC-----CCCeEEe-cCCCCCChhhhhhhccC----cEEEEEe
Q 019899 1 MAGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLAD-----HGNALLV-PSPYYPGFDRDIRFRTG----VELIPVH 70 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~-----~gd~vl~-~~p~~~~~~~~~~~~~g----~~v~~v~ 70 (334)
||+|+.+..+ +++++++|++|+|+++++.+++.++++ +||.|++ ++|+|+.|...+. ..+ ..+..++
T Consensus 83 ia~~~~~~~g--~~v~~~~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~-~~~~~~~~~~~~~~ 159 (416)
T PRK09440 83 LAALLNERYG--WNISPQNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGL-EEDLFVSYRPNIEL 159 (416)
T ss_pred HHHHHHHHhC--CCCChhhEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhh-ccCceeeccccccc
Confidence 4677776666 778999999999999999999999985 5899999 6999999987554 332 2222233
Q ss_pred CCCC-CCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCc
Q 019899 71 CRST-DNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEF 149 (334)
Q Consensus 71 ~~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~ 149 (334)
+..+ .++.+|++.++ +. .+++++++++|+||||.+++.+++++|+++|++++++||+||+|+.+... .
T Consensus 160 ~~~~~~~~~~d~~~l~--~~------~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~-~-- 228 (416)
T PRK09440 160 LPEGQFKYHVDFEHLH--ID------EDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPG-I-- 228 (416)
T ss_pred ccccccccCCCHHHcc--cC------CCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCC-c--
Confidence 3211 14678998887 22 26899999999999999999999999999999999999999999753211 0
Q ss_pred chhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc--cCCChHHHHHHHHhhCChHHHHHH
Q 019899 150 VSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--CSISAPTQRLLISMLSDTKFIQEY 227 (334)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~ 227 (334)
......+ . ..+++++++||||. +++|+|+||+++ ++++++.+...... .+.+.+.|.++..++.+.++....
T Consensus 229 -~~~~~~~--~-~~~~vI~~~SfSK~-~~pGlRiG~~i~-~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~ 302 (416)
T PRK09440 229 -IFSEATP--L-WNPNIILCMSLSKL-GLPGVRCGIVIA-DEEIIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLS 302 (416)
T ss_pred -chhhcCc--c-ccCCeEEEeccccc-CCCcceEEEEeC-CHHHHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHHHH
Confidence 1111111 0 14789999999996 789999999998 88898888776544 467889999999999887653333
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC----CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCC
Q 019899 228 LETNKRRIKKLYDSFVAGLKQL----GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIE 303 (334)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~l~~~----g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~ 303 (334)
....++.++++++.+.+.|++. ++.+..|.+|+|+|++++... .++.++.+. ++++||.+.||..|+...
T Consensus 303 ~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p~gg~fiw~~~~~~~-----~~~~~~~~~-l~~~gV~v~pg~~F~~~~ 376 (416)
T PRK09440 303 ETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKPEGAIFLWLWFKDLP-----ITTEELYQR-LKARGVLVVPGHYFFPGL 376 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCCeEEecCCCceEEEEECCCCC-----CCHHHHHHH-HHHCCEEEechHhhCCCC
Confidence 2335777888888888888653 455668889999999998621 123567777 466899999999885321
Q ss_pred -------CCeEEEEecCCCcccHHHHHHHHHHHHHHc
Q 019899 304 -------PGWFRCCFTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 304 -------~~~iRi~~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
.+++|++++ .+++++++++++|++++++.
T Consensus 377 ~~~~~~~~~~iRis~~-~~~~~l~~~i~~l~~~~~~~ 412 (416)
T PRK09440 377 DEDWPHAHQCIRMNYV-QDDEEIEKGIAILAEEVEKA 412 (416)
T ss_pred ccccCCcCceEEEEec-CCHHHHHHHHHHHHHHHHHH
Confidence 358999998 47899999999999998764
No 88
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.2e-40 Score=295.47 Aligned_cols=303 Identities=21% Similarity=0.313 Sum_probs=243.9
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCC-CCCccccHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRS-TDNFAFSITA 83 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~-~~~~~~~~~~ 83 (334)
+++.++..+++++++|++|+|+++++..++.+++.+||+|++++|+|..+...++ ..|.+++.+++.. ++++.+|++.
T Consensus 71 lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~~d~~~ 149 (380)
T PRK06225 71 LRELILKDLGLDDDEALITAGATESLYLVMRAFLSPGDNAVTPDPGYLIIDNFAS-RFGAEVIEVPIYSEECNYKLTPEL 149 (380)
T ss_pred HHHHHHHhcCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHH-HhCceEEeeccccccCCccCCHHH
Confidence 5556666677889999999999999999999999999999999999998888888 8999999999743 3467899999
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCC
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDK 163 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (334)
+++.+++ +++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.+|..+. .....+ +.
T Consensus 150 l~~~~~~------~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~---~~~~~~------~~ 214 (380)
T PRK06225 150 VKENMDE------NTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREH---TLAAEY------AP 214 (380)
T ss_pred HHhhcCC------CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccC---Cchhhc------CC
Confidence 9998875 78999999999999999999999999999999999999999998765422 111111 25
Q ss_pred CcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh-cccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHH
Q 019899 164 DRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT-RFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSF 242 (334)
Q Consensus 164 ~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 242 (334)
++++++.||||.+|++|+|+||+++ ++++.+.++... ..++.+.+.+.++..++... .++.++.++.++++++.+
T Consensus 215 ~~~i~~~s~SK~~g~~G~RiG~i~~-~~~l~~~~~~~~~~~~~~~~~~~~~a~~~l~~~---~~~~~~~~~~~~~~~~~l 290 (380)
T PRK06225 215 EHTVTSYSFSKIFGMAGLRIGAVVA-TPDLIEVVKSIVINDLGTNVIAQEAAIAGLKVK---DEWIDRIRRTTFKNQKLI 290 (380)
T ss_pred CCEEEEeechhhcCCccceeEEEec-CHHHHHHHHHHHhcccCCCHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHH
Confidence 7889999999999999999999998 788888887654 34667888888887777642 234455666777778888
Q ss_pred HHHHHhC-CCcc-cCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC-CCCeEEEEecCCCcccH
Q 019899 243 VAGLKQL-GIRC-SESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI-EPGWFRCCFTSLTHEDI 319 (334)
Q Consensus 243 ~~~l~~~-g~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~-~~~~iRi~~~~~~~~~l 319 (334)
.+.|++. ++.+ ..+.+|.++|++++... .+..++...|. ++||.+.||..|+.. .++++|++++ .+++++
T Consensus 291 ~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~l~~~l~-~~gi~v~~g~~~~~~~~~~~iR~s~~-~~~e~l 363 (380)
T PRK06225 291 KEAVDEIEGVFLPVYPSHGNMMVIDISEAG-----IDPEDLVEYLL-ERKIFVRQGTYTSKRFGDRYIRVSFS-IPREQV 363 (380)
T ss_pred HHHHHhCcCCccccCCCCCeEEEEEccccc-----CCHHHHHHHHH-HCCEEEcCCcccCcCCCCceEEEEeC-CCHHHH
Confidence 8888874 5432 23556778899986421 13467888865 589999999876542 3579999998 688999
Q ss_pred HHHHHHHHHHHHHcC
Q 019899 320 PLVIERIQKVAETCK 334 (334)
Q Consensus 320 ~~~l~~l~~~~~~~~ 334 (334)
++++++|++++++.|
T Consensus 364 ~~~~~~l~~~~~~~~ 378 (380)
T PRK06225 364 EVFCEEFPDVVETLR 378 (380)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999998754
No 89
>PLN02397 aspartate transaminase
Probab=100.00 E-value=7.2e-40 Score=297.05 Aligned_cols=273 Identities=18% Similarity=0.286 Sum_probs=220.1
Q ss_pred HHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCC
Q 019899 30 VEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANP 109 (334)
Q Consensus 30 ~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~np 109 (334)
+...+..++.+||+|++++|+|+.|...++ ..|.+++.+++.+++++.+|++.+++.+++. ..+++++++++|+||
T Consensus 131 l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~-~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~---~~~~~~i~~~~P~NP 206 (423)
T PLN02397 131 LGAEFLARFYPGSTIYIPNPTWGNHHNIFR-DAGVPVRTYRYYDPKTRGLDFDGLLEDLKAA---PDGSFVLLHACAHNP 206 (423)
T ss_pred HHHHHHHHhCCCCEEEEeCCCchhHHHHHH-HcCCeEEEeecccCcCCccCHHHHHHHHHhC---CCCCEEEEeCCCCCC
Confidence 444444555799999999999999999999 9999999999844455789999999888642 136788888999999
Q ss_pred cccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCC--CcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEe
Q 019899 110 VGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNE--EFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIY 187 (334)
Q Consensus 110 tG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~ 187 (334)
||.+++.+++++|+++|++|+++||+||+|.++.|++. ...++..+.. ...++++++||||+++++|+|+||++
T Consensus 207 TG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~----~~~~vI~~~SfSK~~~~~G~RvG~~v 282 (423)
T PLN02397 207 TGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVE----DGHEILVAQSYAKNMGLYGERVGALS 282 (423)
T ss_pred CCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHh----cCCcEEEEEECcccCCCccccceEEE
Confidence 99999999999999999999999999999999998541 2334433332 13579999999999999999999985
Q ss_pred --ecCHHHHH----HHHHhhc--ccCCChHHHHHHHHhhCChHHHHHH---HHHHHHHHHHHHHHHHHHHHhCC----Cc
Q 019899 188 --SYNESVLA----AAKKLTR--FCSISAPTQRLLISMLSDTKFIQEY---LETNKRRIKKLYDSFVAGLKQLG----IR 252 (334)
Q Consensus 188 --~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~g----~~ 252 (334)
++++++++ .+..... .++.+.+.|.++..++...++.+++ +.+++++++++++.+.+.|++++ ++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~~~~~ 362 (423)
T PLN02397 283 VVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGSPGDWS 362 (423)
T ss_pred EEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 44555544 3333332 2356778999999999876443343 67889999999999999999987 77
Q ss_pred ccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHHHHHHHHHH
Q 019899 253 CSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAE 331 (334)
Q Consensus 253 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~ 331 (334)
+..|++|||+|++++ .+++.+|++++||.+.+ .+ |++++..+++++++++++|++++.
T Consensus 363 ~~~p~gg~fl~~~l~-----------~~~~~~Ll~~~~V~v~~--------~~--Ri~~~~~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 363 HITKQIGMFSFTGLN-----------KEQVDRMTKEYHIYMTR--------DG--RISMAGLSSKNVPYLADAIHAVVT 420 (423)
T ss_pred cccCCceEEEecCCC-----------HHHHHHHHHhCCEEECC--------CC--eEEEeeCCHHHHHHHHHHHHHHHh
Confidence 778999999999874 36899999999999963 22 999987899999999999999985
No 90
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=2.9e-40 Score=294.92 Aligned_cols=287 Identities=19% Similarity=0.323 Sum_probs=233.7
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITAL 84 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l 84 (334)
+++.+++.+++++++|++|+|+++++..++.+++++||+|++++|+|+.+...++ ..|.+++.++++ .++.+|++++
T Consensus 83 Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l~~~gd~Vli~~P~y~~~~~~~~-~~g~~~~~v~~~--~~~~~d~~~l 159 (370)
T PRK09105 83 LRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAFTSPTAGLVTADPTYEAGWRAAD-AQGAPVAKVPLR--ADGAHDVKAM 159 (370)
T ss_pred HHHHHHHHhCcChhhEEEcCChHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHH-HcCCeEEEecCC--CCCCCCHHHH
Confidence 4455566677899999999999999999999999999999999999999999888 899999999984 4567899998
Q ss_pred HHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCC
Q 019899 85 DQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKD 164 (334)
Q Consensus 85 ~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (334)
++. .+ +++++++++|+||||.+++.++++++++.| ++++++|+||+|..|... .+...+.. ..+
T Consensus 160 ~~~-~~------~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~-~~~~~lIvDEaY~~f~~~----~s~~~~~~----~~~ 223 (370)
T PRK09105 160 LAA-DP------NAGLIYICNPNNPTGTVTPRADIEWLLANK-PAGSVLLVDEAYIHFSDA----PSVVDLVA----QRK 223 (370)
T ss_pred Hhc-CC------CCCEEEEeCCCCCCCcCcCHHHHHHHHHhC-CCCcEEEEECchHHhccC----cchHHHHh----hCC
Confidence 865 22 678999999999999999999999999875 469999999999876531 13333322 157
Q ss_pred cEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHH
Q 019899 165 RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVA 244 (334)
Q Consensus 165 ~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (334)
+++++.||||.+|++|+|+||+++ ++++++.+... ..+..+.+.+.++..++.+. +++++.+++++++++++.+
T Consensus 224 ~vi~~~SfSK~~g~~GlRiG~~v~-~~~~i~~l~~~-~~~~~~~~~~~aa~~~L~~~----~~~~~~~~~~~~~r~~l~~ 297 (370)
T PRK09105 224 DLIVLRTFSKLYGMAGMRLGLAAA-RPDLLAKLARF-GHNPLPVPAAAAGLASLRDP----KLVPQRRAENAAVREDTIA 297 (370)
T ss_pred CEEEEecccHhhcCCccceeeeec-CHHHHHHHHhc-CCCCcCHHHHHHHHHHHhCH----HHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999998 88888888776 45567788888888888653 4567777889999999999
Q ss_pred HHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHHH
Q 019899 245 GLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIE 324 (334)
Q Consensus 245 ~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l~ 324 (334)
.|++.|+++..+.++|+ +++++. +..++.+.|++ +||.+ +..|+ ..++++|++++ ++++++++++
T Consensus 298 ~L~~~g~~~~~~~~~f~-~~~~~~--------~~~~l~~~L~~-~gI~v--~~~~~-~~~~~~Ris~~--~~~~~~~l~~ 362 (370)
T PRK09105 298 WLKKKGYKCTPSQANCF-MVDVKR--------PAKAVADAMAK-QGVFI--GRSWP-IWPNWVRVTVG--SEEEMAAFRS 362 (370)
T ss_pred HHHHCCCCcCCCCCcEE-EEeCCC--------CHHHHHHHHHH-CCcEE--ecCCC-CCCCeEEEEcC--CHHHHHHHHH
Confidence 99999988888888776 477652 24678888776 69998 33343 23689999998 6788999999
Q ss_pred HHHHHHH
Q 019899 325 RIQKVAE 331 (334)
Q Consensus 325 ~l~~~~~ 331 (334)
.|+++++
T Consensus 363 al~~~~~ 369 (370)
T PRK09105 363 AFAKVMR 369 (370)
T ss_pred HHHHHhh
Confidence 9988763
No 91
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-39 Score=290.18 Aligned_cols=286 Identities=19% Similarity=0.302 Sum_probs=230.0
Q ss_pred hhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHH
Q 019899 4 FMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITA 83 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~ 83 (334)
.+++.+++.+++++++|++|+|+++++..++.+++++||+|++++|+|+.+...++ ..|.+++.+++ ++++.+|+++
T Consensus 64 ~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~-~~g~~~~~v~~--~~~~~~d~~~ 140 (353)
T PRK05387 64 ALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAFFNHDRPLLFPDITYSFYPVYAG-LYGIPYEEIPL--DDDFSIDVED 140 (353)
T ss_pred HHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEeCCCHHHHHHHHH-HcCCEEEEeec--CCCCCCCHHH
Confidence 35566666677899999999999999999999999999999999999998888777 89999999998 3457899988
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCC
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDK 163 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (334)
+++ +.+++++++|+||||.++|.+++.+|+++++ ++++|+||+|.+|. +....++ .. ..
T Consensus 141 l~~----------~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~--~~~livDe~y~~~~--~~~~~~~---~~----~~ 199 (353)
T PRK05387 141 YLR----------PNGGIIFPNPNAPTGIALPLAEIERILAANP--DSVVVIDEAYVDFG--GESAIPL---ID----RY 199 (353)
T ss_pred HHh----------cCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC--CcEEEEeCcccccC--CcchHHH---Hh----hC
Confidence 863 3578999999999999999988988888653 99999999998753 3222222 22 15
Q ss_pred CcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc---ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 019899 164 DRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR---FCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYD 240 (334)
Q Consensus 164 ~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (334)
+++++++||||.+|++|+|+||+++ ++++++.+++... .++.+.+.|.++..++...+ +..+.++++.++++
T Consensus 200 ~~~i~~~S~SK~~~~~GlR~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~~~----~~~~~~~~~~~~~~ 274 (353)
T PRK05387 200 PNLLVVQTFSKSRSLAGLRVGFAIG-HPELIEALNRVKNSFNSYPLDRLAQAGAIAAIEDEA----YFEETRAKVIATRE 274 (353)
T ss_pred CCEEEEEehhHhhcchhhhceeeec-CHHHHHHHHHhhccCCCCCcCHHHHHHHHHHhcCHH----HHHHHHHHHHHHHH
Confidence 6799999999999999999999998 8899898887653 34678899999988887643 34566778889999
Q ss_pred HHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHH
Q 019899 241 SFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIP 320 (334)
Q Consensus 241 ~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~ 320 (334)
.+.+.|++.|+.+. +.+++|+|++++.. +..++.+.| .++||.+.+... ...++++|++++ ++++++
T Consensus 275 ~l~~~L~~~g~~~~-~~~~~~~~~~~~~~-------~~~~~~~~l-~~~gi~v~~~~~--~~~~~~iRis~~--~~~~~~ 341 (353)
T PRK05387 275 RLVEELEALGFEVL-PSKANFVFARHPSH-------DAAELAAKL-RERGIIVRHFNK--PRIDQFLRITIG--TDEEME 341 (353)
T ss_pred HHHHHHHHCCCeEC-CCcCcEEEEECCCC-------CHHHHHHHH-HHCCEEEEECCC--CCCCCeEEEEeC--CHHHHH
Confidence 99999999888754 45677889987742 346788885 558999975321 123579999998 779999
Q ss_pred HHHHHHHHHHH
Q 019899 321 LVIERIQKVAE 331 (334)
Q Consensus 321 ~~l~~l~~~~~ 331 (334)
++++.|++++.
T Consensus 342 ~~~~~L~~~~~ 352 (353)
T PRK05387 342 ALVDALKEILA 352 (353)
T ss_pred HHHHHHHHHhh
Confidence 99999998875
No 92
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.9e-40 Score=292.25 Aligned_cols=287 Identities=18% Similarity=0.308 Sum_probs=234.8
Q ss_pred hhhhhcCCCCCCC-CcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHH
Q 019899 5 MSQVLGQAVSFDP-SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITA 83 (334)
Q Consensus 5 ~~~~~~~~~~~~~-~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~ 83 (334)
+++.+++.++++. ++|++|+|+++++..++.+++++||+|++++|+|..+...++ ..|.+++.++++ +++.+|+++
T Consensus 68 lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~~~~~~gd~vlv~~P~y~~~~~~~~-~~g~~~~~i~~~--~~~~~d~~~ 144 (356)
T PRK04870 68 LKAALRAAMGVPAGADVLLGNGSDELIQLLALACAKPGATVLAPEPGFVMYRMSAK-LAGLEFVGVPLT--ADFTLDLPA 144 (356)
T ss_pred HHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHHHhcCCCCEEEECCCCHHHHHHHHH-HcCCEEEEecCC--CCCCCCHHH
Confidence 3444455555555 489999999999999999999999999999999999999888 999999999984 457899999
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCC
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDK 163 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (334)
+++++++. +++++++++|+||||.++|.+++++++++| ++++|+||+|..+.+.. .. ..+.. .
T Consensus 145 l~~~~~~~-----~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~---~~~ii~De~y~~~~~~~--~~--~~~~~-----~ 207 (356)
T PRK04870 145 MLAAIAEH-----RPALVFLAYPNNPTGNLFDDADVERIIEAA---PGLVVVDEAYQPFAGDS--WL--PRLAR-----F 207 (356)
T ss_pred HHHHhhcC-----CCCEEEEcCCCCCCCCCCCHHHHHHHHHHC---CCEEEEECCchhhcCcc--hH--HHHhh-----C
Confidence 99998752 789999999999999999999999999988 77899999998865421 11 11222 5
Q ss_pred CcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHH
Q 019899 164 DRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFV 243 (334)
Q Consensus 164 ~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (334)
++++++.|+|| ++++|+|+||+++ ++++++.+......++.+.+.|.++..+++..+ ++++.+++++++++.+.
T Consensus 208 ~~vi~~~S~SK-~~~~GlRiG~~i~-~~~~i~~~~~~~~~~~~~~~~q~~a~~~l~~~~----~~~~~~~~~~~~~~~l~ 281 (356)
T PRK04870 208 PNLLVMRTVSK-LGLAGLRLGYLAG-HPAWIAELDKVRPPYNVNVLTQATALFALEHVD----VLDAQAAQLRAERTRLA 281 (356)
T ss_pred CCEEEEecchh-hhhHHHhhhhhhC-CHHHHHHHHHccCCCcCCHHHHHHHHHHHhCHH----HHHHHHHHHHHHHHHHH
Confidence 68999999999 8889999999998 788888888777667888899988888876532 34666778889999999
Q ss_pred HHHHhC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHH
Q 019899 244 AGLKQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLV 322 (334)
Q Consensus 244 ~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~ 322 (334)
+.|++. ++.+ .+.+++|+|++++. ..++... ++++||.+.|+..|+...++++|++++ ++++.+++
T Consensus 282 ~~L~~~~~~~~-~~~~~~~~~~~~~~---------~~~~~~~-l~~~gI~v~~~~~f~~~~~~~iRis~~--~~~~~~~l 348 (356)
T PRK04870 282 AALAALPGVTV-FPSAANFILVRVPD---------AAAVFDG-LKTRGVLVKNLSGMHPLLANCLRVTVG--TPEENAQF 348 (356)
T ss_pred HHHHhCCCcEE-CCCCCeEEEEECCC---------HHHHHHH-HHHCCEEEEECCCCCCCCCCeEEEeCC--CHHHHHHH
Confidence 999887 7765 45567789998872 2466666 677999999998886555789999999 78899999
Q ss_pred HHHHHHHH
Q 019899 323 IERIQKVA 330 (334)
Q Consensus 323 l~~l~~~~ 330 (334)
+++|++++
T Consensus 349 ~~al~~~~ 356 (356)
T PRK04870 349 LAALKAAL 356 (356)
T ss_pred HHHHHHhC
Confidence 99998753
No 93
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.4e-39 Score=286.84 Aligned_cols=287 Identities=19% Similarity=0.338 Sum_probs=227.7
Q ss_pred hhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHH
Q 019899 4 FMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITA 83 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~ 83 (334)
.+++.+++.+++++++|++|+|+++++..++.+++++||+|++++|+|+.+...++ ..|.+++.++++ +++.+|+++
T Consensus 63 ~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-~~g~~~~~v~~~--~~~~~d~~~ 139 (351)
T PRK14807 63 KLREELARYCSVVPTNIFVGNGSDEIIHLIMLAFINKGDVVIYPHPSFAMYSVYSK-IAGAVEIPVKLK--EDYTYDVGS 139 (351)
T ss_pred HHHHHHHHHhCCCcccEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHH-HcCCeEEEeecC--CCCCCCHHH
Confidence 35666666678889999999999999999999999999999999999999888888 899999999973 456899999
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCC
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDK 163 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (334)
+++++++. +++++++++|+||||.+++.+++.++ |++++.++|+||+|.++. +....+. +.. .
T Consensus 140 l~~~~~~~-----~~k~v~l~~p~NPtG~~~~~~~l~~l---~~~~~~~~ivDe~y~~~~--~~~~~~~--~~~-----~ 202 (351)
T PRK14807 140 FIKVIEKY-----QPKLVFLCNPNNPTGSVIEREDIIKI---IEKSRGIVVVDEAYFEFY--GNTIVDV--INE-----F 202 (351)
T ss_pred HHHHhhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHH---HHhCCCEEEEeCcchhhc--ccchHHH--hhh-----C
Confidence 99998752 78999999999999999996555555 456677899999998763 2222221 111 5
Q ss_pred CcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHH
Q 019899 164 DRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFV 243 (334)
Q Consensus 164 ~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (334)
+++++++||||.+|++|+|+||+++ ++++++.++.....+..+.+.|.++..+++.. + +.+..+.+.++++.+.
T Consensus 203 ~~vi~~~S~SK~~~~~GlRiG~~v~-~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~----~~~~~~~~~~~r~~l~ 276 (351)
T PRK14807 203 ENLIVLRTLSKAFGLAGLRVGYAVA-NENILKYLNLVKSPYNINSLSQVIALKVLRTG-V----LKERVNYILNERERLI 276 (351)
T ss_pred CCEEEEecchHhcccchhceeeeec-CHHHHHHHHHccCCCCcCHHHHHHHHHHHhHH-H----HHHHHHHHHHHHHHHH
Confidence 7899999999999999999999998 88999999887777788999999999998652 2 3444556778888888
Q ss_pred HHHHhC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHH
Q 019899 244 AGLKQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLV 322 (334)
Q Consensus 244 ~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~ 322 (334)
+.|++. |+.+. +.+++|+|++++. ..++.+. +.++||.+.++.... ..++++|++++ ++++.+++
T Consensus 277 ~~l~~~~g~~~~-~~~~~~~~i~~~~---------~~~~~~~-l~~~gV~v~~~~~~~-~~~~~iRis~~--~~~~~~~l 342 (351)
T PRK14807 277 KELSKIPGIKVY-PSKTNFILVKFKD---------ADYVYQG-LLERGILVRDFSKVE-GLEGALRITVS--SCEANDYL 342 (351)
T ss_pred HHHHhCCCcEEC-cCCccEEEEEcCC---------HHHHHHH-HHHCCEEEEECCCCC-CCCCeEEEEcC--CHHHHHHH
Confidence 999775 77765 4457789998863 2466666 445799998754321 23679999998 67788888
Q ss_pred HHHHHHHH
Q 019899 323 IERIQKVA 330 (334)
Q Consensus 323 l~~l~~~~ 330 (334)
++.|++++
T Consensus 343 ~~~l~~~~ 350 (351)
T PRK14807 343 INGLKELL 350 (351)
T ss_pred HHHHHHhh
Confidence 98888764
No 94
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=5.5e-39 Score=285.59 Aligned_cols=285 Identities=20% Similarity=0.316 Sum_probs=229.4
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITAL 84 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l 84 (334)
+++.+++.+++++++|++|+|+++++.+++. ++++ .++++.|+|..+...++ ..|.+++.+++++ ++.+|++.+
T Consensus 63 lr~aia~~~~~~~~~I~it~Ga~~al~~~~~--l~~~-~viv~~P~y~~~~~~~~-~~G~~i~~v~~~~--~~~~d~~~l 136 (349)
T PRK07908 63 ARAAVAARHGRTPDEVLLLAGAAEGFALLAR--LRPR-RAAVVHPSFTEPEAALR-AAGIPVHRVVLDP--PFRLDPAAV 136 (349)
T ss_pred HHHHHHHHhCcChhhEEECCCHHHHHHHHHh--cCCC-eEEEeCCCChHHHHHHH-HcCCEEEeeccCc--ccCcChhHh
Confidence 4555556667899999999999999999988 4564 67788999999998888 8999999999843 367888754
Q ss_pred HHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCC
Q 019899 85 DQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKD 164 (334)
Q Consensus 85 ~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (334)
++ +++++++++|+||||.++|.+ +|.++|+ ++.++|+||+|+++.. +. ..++... +.+
T Consensus 137 ----~~------~~~~i~l~np~NPTG~~~~~~---~l~~l~~-~~~~iIvDe~y~~~~~-~~-~~~l~~~------~~~ 194 (349)
T PRK07908 137 ----PD------DADLVVIGNPTNPTSVLHPAE---QLLALRR-PGRILVVDEAFADAVP-GE-PESLAGD------DLP 194 (349)
T ss_pred ----cc------CCCEEEEcCCCCCCCCCcCHH---HHHHHHh-cCCEEEEECcchhhcc-CC-ccccccc------cCC
Confidence 22 678999999999999999955 4555565 5788999999998754 22 2333332 256
Q ss_pred cEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHH
Q 019899 165 RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVA 244 (334)
Q Consensus 165 ~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (334)
++++++||||.++++|+|+||+++ ++++++.+......+..+++.+.++..++.... .+++.+.+++++++++++.+
T Consensus 195 ~~i~i~S~SK~~~l~GlRiG~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~~~~~~~~~~~~r~~l~~ 271 (349)
T PRK07908 195 GVLVLRSLTKTWSLAGLRVGYALG-APDVLARLTRGRAHWPVGTLQLEAIAACCAPRA--VAEAAADAARLAADRAEMVA 271 (349)
T ss_pred CEEEEeecccccCCccceeeeeec-CHHHHHHHHhcCCCCCccHHHHHHHHHHhcccc--hHHHHHHHHHHHHHHHHHHH
Confidence 799999999999999999999998 888999988777677788888888878776322 35567788899999999999
Q ss_pred HHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHHH
Q 019899 245 GLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIE 324 (334)
Q Consensus 245 ~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l~ 324 (334)
.|+++++++..+.+++|+|++++. ..++... ++++||.+.||..|+...++++|++++ ++++++++++
T Consensus 272 ~L~~~~~~~~~p~~g~~~~~~~~~---------~~~~~~~-l~~~gI~v~~g~~f~~~~~~~vRis~~--~~~~~~~l~~ 339 (349)
T PRK07908 272 GLRAVGARVVDPAAAPFVLVRVPD---------AELLRKR-LRERGIAVRRGDTFPGLDPDYLRLAVR--PRAEVPVLVQ 339 (349)
T ss_pred HHHhCCcEeccCCCceEEEEECCc---------HHHHHHH-HHhCCEEEEECCCCCCCCCCeEEEEeC--CCccHHHHHH
Confidence 999888888888899999999874 1355555 677899999999886445789999997 8899999999
Q ss_pred HHHHHHHH
Q 019899 325 RIQKVAET 332 (334)
Q Consensus 325 ~l~~~~~~ 332 (334)
.|++++..
T Consensus 340 al~~~~~~ 347 (349)
T PRK07908 340 ALAEILKA 347 (349)
T ss_pred HHHHHHhc
Confidence 99988754
No 95
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-39 Score=289.86 Aligned_cols=288 Identities=19% Similarity=0.304 Sum_probs=232.0
Q ss_pred hhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCC-CeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccH
Q 019899 3 GFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHG-NALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 3 ~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~g-d~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
..+++.+++.+++++++|++|+|+++++..++.+++++| |+|+++.|+|+.|...++ ..|.+++.+|+. +++.+|+
T Consensus 63 ~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~~~~~-~~g~~v~~v~~~--~~~~~~~ 139 (354)
T PRK04635 63 PELINAYSAYAGVAPEQILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYAISAE-TFNVGVKALPLT--ADYQLPL 139 (354)
T ss_pred HHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHH-HcCCEEEEEecC--CCCCCCH
Confidence 356677777788999999999999999999999999888 899999999999988888 899999999984 4567888
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
+.+++ + + +++++++++|+||||.++|.+++.++++.|+ +++||+||+|.++... .+...+..
T Consensus 140 ~~l~~-~-~------~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~--~~~vivDeay~~~~~~----~s~~~~~~---- 201 (354)
T PRK04635 140 DYIEQ-L-D------GAKLVFICNPNNPTGTVIDRADIEQLIEMTP--DAIVVVDEAYIEFCPE----YSVADLLA---- 201 (354)
T ss_pred HHHHh-c-c------CCCEEEEeCCCCCCCccCCHHHHHHHHHhCC--CcEEEEeCchHhhccC----cchHHHHh----
Confidence 88863 3 2 7899999999999999999999999998876 4999999999987632 12222222
Q ss_pred CCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDS 241 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 241 (334)
..++++++.||||++|++|+|+||+++ ++++++.+......++.+.+.+.++..++.... .+++.+.++.+++++++
T Consensus 202 ~~~~~iv~~S~SK~~~l~GlRlG~~i~-~~~~~~~l~~~~~~~~~~~~~~~~a~~~l~~~~--~~~~~~~~~~~~~~r~~ 278 (354)
T PRK04635 202 SYPNLVVLRTLSKAFALAGARCGFTLA-NEELIEILMRVIAPYPVPLPVSEIATQALSEAG--LARMKFQVLDLNAQGAR 278 (354)
T ss_pred hCCCEEEEechHHHhhhhHHHHhhhhC-CHHHHHHHHhhcCCCCCCHHHHHHHHHHHhccc--HHHHHHHHHHHHHHHHH
Confidence 157889999999999999999999998 888999888776677888888888888886532 23456667788899999
Q ss_pred HHHHHHhCC-CcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHH
Q 019899 242 FVAGLKQLG-IRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIP 320 (334)
Q Consensus 242 ~~~~l~~~g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~ 320 (334)
+.+.|++++ +.+..+. |.|+|++++. ..++.+. ++++||.++++... ..++++|++++ ++++++
T Consensus 279 l~~~L~~~~~~~~~~~~-g~f~~~~~~~---------~~~~~~~-l~~~gv~v~~~~~~--~~~~~lRis~~--~~e~~~ 343 (354)
T PRK04635 279 LQAALSMYGGAKVLEGN-GNYVLAKFDD---------VDAVFKA-LWDAGIVARAYKDP--RLANCIRFSFS--NRAETD 343 (354)
T ss_pred HHHHHHhCCCceECCCC-CcEEEEECCC---------HHHHHHH-HHHCCEEEEECCCC--CCCCeEEEEeC--CHHHHH
Confidence 999999885 6766554 5678888862 2456655 66789999865432 23679999998 889999
Q ss_pred HHHHHHHHH
Q 019899 321 LVIERIQKV 329 (334)
Q Consensus 321 ~~l~~l~~~ 329 (334)
+++++|++.
T Consensus 344 ~l~~al~~~ 352 (354)
T PRK04635 344 KLIGLIRNQ 352 (354)
T ss_pred HHHHHHHHh
Confidence 999998753
No 96
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.2e-38 Score=281.26 Aligned_cols=275 Identities=16% Similarity=0.281 Sum_probs=221.1
Q ss_pred hhhhhcCCCCCC-CCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHH
Q 019899 5 MSQVLGQAVSFD-PSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITA 83 (334)
Q Consensus 5 ~~~~~~~~~~~~-~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~ 83 (334)
+++.+++.+++. +++|++|+|+++++..+.. ++++|| |++++|+|+.|...++ ..|.+++.++.+. +.
T Consensus 58 L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~~-~~~~g~-v~v~~P~y~~y~~~~~-~~g~~~~~v~~~~--------~~ 126 (339)
T PRK06959 58 LAACAARYYGAPDAAHVLPVAGSQAAIRALPA-LLPRGR-VGIAPLAYSEYAPAFA-RHGHRVVPLDEAA--------DT 126 (339)
T ss_pred HHHHHHHHhCCCCcccEEECcCHHHHHHHHHH-hcCCCe-EEEcCCCcHHHHHHHH-HCCCEEEeecccc--------hh
Confidence 344444555565 5899999999999987755 567776 8899999999999999 9999999888521 11
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCC
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDK 163 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (334)
+.+ .++++++++|+||||.+++.++++++++.|.+++.++|+||+|.++.+. .++..+.. .
T Consensus 127 ----~~~------~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~----~s~~~~~~-----~ 187 (339)
T PRK06959 127 ----LPA------ALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPA----ASLAAHTD-----R 187 (339)
T ss_pred ----ccc------cCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCc----ccchhccC-----C
Confidence 222 4578999999999999999999999999999999999999999987642 23333222 4
Q ss_pred CcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHH
Q 019899 164 DRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFV 243 (334)
Q Consensus 164 ~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (334)
+++++++||||.+|++|+|+||+++ ++++++.+.+....++.+.+.|.++..++++.++ ..+.++.++++++++.
T Consensus 188 ~~vi~l~SfSK~~gl~GlRiGy~v~-~~~li~~l~~~~~~~~vs~~~q~a~~~~L~~~~~----~~~~~~~~~~~r~~l~ 262 (339)
T PRK06959 188 PGLVVLRSVGKFFGLAGVRAGFVLA-APALLAALRDALGAWTVSGPARHAVRAAFADAAW----QAAMRERLAADGARLA 262 (339)
T ss_pred CCEEEEecChhhcCCcchheEEEec-CHHHHHHHHHhcCCCCCcHHHHHHHHHHhCcHHH----HHHHHHHHHHHHHHHH
Confidence 6789999999999999999999998 8899999998888888999999999999987543 4567788999999999
Q ss_pred HHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHH
Q 019899 244 AGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVI 323 (334)
Q Consensus 244 ~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l 323 (334)
+.|+++|+++. .+++|+|++++. ..++...|. ++||.+++ |+ ..+++||+++ .++++.++++
T Consensus 263 ~~L~~~g~~~~--~~~~f~~~~~~~---------~~~l~~~l~-~~GI~vr~---~~--~~~~lRisi~-~~~~e~~~l~ 324 (339)
T PRK06959 263 ALLRAHGFAVH--ATPLFSWTDDPR---------AAALHAALA-RRGIWTRY---FA--PPPSVRFGLP-ADEAEWQRLE 324 (339)
T ss_pred HHHHHCCCCcc--CcceEEEEeCCC---------HHHHHHHHH-hCCeEEEE---CC--CCCeEEEECC-CCHHHHHHHH
Confidence 99999888765 357889998752 257777754 57999974 32 2569999995 4778999999
Q ss_pred HHHHHHHHH
Q 019899 324 ERIQKVAET 332 (334)
Q Consensus 324 ~~l~~~~~~ 332 (334)
+.|+++++.
T Consensus 325 ~al~~~~~~ 333 (339)
T PRK06959 325 DALAECVPT 333 (339)
T ss_pred HHHHHHHHH
Confidence 999888764
No 97
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=8.5e-39 Score=286.02 Aligned_cols=287 Identities=19% Similarity=0.324 Sum_probs=231.7
Q ss_pred hhhhhhcCCCCCCCCcEEE-ecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHH
Q 019899 4 FMSQVLGQAVSFDPSQIVL-TAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSIT 82 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~~i~~-~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~ 82 (334)
.+++.+++.+++++++|++ ++|+++++..++.+++++||+|+++.|+|+.+...++ ..|.+++.++. ++++.+|++
T Consensus 73 ~lr~~ia~~~~~~~~~i~~~~~Ga~~~i~~~~~~~~~~gd~vlv~~p~y~~~~~~~~-~~g~~~~~~~~--~~~~~~~~~ 149 (361)
T PRK00950 73 ELREALSKYTGVPVENIIVGGDGMDEVIDTLMRTFIDPGDEVIIPTPTFSYYEISAK-AHGAKPVYAKR--EEDFSLDVD 149 (361)
T ss_pred HHHHHHHHHhCCCHHHEEEeCCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHH-HcCCEEEEeec--CCCCCcCHH
Confidence 3556666667788999999 7888999999999999999999999999999888888 88999999985 455689999
Q ss_pred HHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccC
Q 019899 83 ALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVD 162 (334)
Q Consensus 83 ~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (334)
++++.+++ +++++++++|+||||.++| .+++.++|+++|+++|+||+|.++. +.. ...+.. .
T Consensus 150 ~l~~~~~~------~~~~v~~~~p~nptG~~~~---~~~l~~l~~~~~~~li~De~y~~~~--~~~---~~~~~~----~ 211 (361)
T PRK00950 150 SVLNAITE------KTKVIFLCTPNNPTGNLIP---EEDIRKILESTDALVFVDEAYVEFA--EYD---YTPLAL----E 211 (361)
T ss_pred HHHHHhcc------CCCEEEEeCCCCCCCCCcC---HHHHHHHHHHCCcEEEEECchhhhC--ccc---hHHHHH----h
Confidence 99998865 7889999999999999999 5555666678899999999998765 222 222222 1
Q ss_pred CCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHH
Q 019899 163 KDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSF 242 (334)
Q Consensus 163 ~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 242 (334)
.+++++++||||.+|++|+|+||+++ ++++++.+++....++.+++.+.++..++...+ ++.+.+++++++++++
T Consensus 212 ~~~vi~~~S~SK~~g~~GlRiG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~----~~~~~~~~~~~~r~~l 286 (361)
T PRK00950 212 YDNLIIGRTFSKVFGLAGLRIGYGFV-PEWLIDYYMRAKTPFSLTRLSQAAAIAALSDKE----YIEKSIEHGIKSREYL 286 (361)
T ss_pred cCCEEEEEeehHhhcCchhhcchhcC-CHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCHH----HHHHHHHHHHHHHHHH
Confidence 56889999999999999999999998 888988898877777888999998888887643 3455666777777787
Q ss_pred HHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHH
Q 019899 243 VAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLV 322 (334)
Q Consensus 243 ~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~ 322 (334)
.+.|. +++ .+.+++|+|++++.. ++.++++.|.+ +||.+.||..|+...++++|++++ ++++++++
T Consensus 287 ~~~l~---~~~-~~~~~~~i~~~~~~~-------~~~~~~~~l~~-~gv~v~~~~~f~~~~~~~lRis~~--~~~~~~~l 352 (361)
T PRK00950 287 YNELP---FKV-YPSEANFVLVDVTPM-------TAKEFCEELLK-RGVIVRDCTSFRGLGDYYIRVSIG--TFEENERF 352 (361)
T ss_pred HhhcC---eeE-CCCcceEEEEECCCC-------CHHHHHHHHHH-CCEEEeeCCccCCCCCCeEEEECC--CHHHHHHH
Confidence 77775 444 345778899988431 34688888655 799999998886545689999998 77899999
Q ss_pred HHHHHHHH
Q 019899 323 IERIQKVA 330 (334)
Q Consensus 323 l~~l~~~~ 330 (334)
++.|++++
T Consensus 353 ~~~L~~il 360 (361)
T PRK00950 353 LEILKEIV 360 (361)
T ss_pred HHHHHHHh
Confidence 99999876
No 98
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=3e-38 Score=278.19 Aligned_cols=275 Identities=18% Similarity=0.259 Sum_probs=219.2
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITAL 84 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l 84 (334)
+++.+++.++ +++|++|+|+++++.++.. +.+||+|++++|+|+.+...++ ..|.+++.+|+ +++
T Consensus 54 Lr~~ia~~~~--~~~I~it~Gs~~al~~~~~--~~~gd~v~v~~P~y~~~~~~~~-~~g~~~~~v~~----------~~~ 118 (330)
T PRK05664 54 LEAAARAYYG--APQLLPVAGSQAAIQALPR--LRAPGRVGVLSPCYAEHAHAWR-RAGHQVRELDE----------AEV 118 (330)
T ss_pred HHHHHHHHhC--CCCEEECcCHHHHHHHHHH--ccCCCEEEEcCCChHHHHHHHH-HcCCeEEEech----------hhH
Confidence 4555555444 5799999999999998863 5799999999999999999999 99999999985 235
Q ss_pred HHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCC
Q 019899 85 DQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKD 164 (334)
Q Consensus 85 ~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (334)
+++++ +++++++++|+||||.+++.+++++|+++|++++++||+||+|.++.. ..++..+.. .+
T Consensus 119 ~~~~~-------~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~----~~s~~~~~~-----~~ 182 (330)
T PRK05664 119 EAALD-------SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTP----QHSLAACAH-----RP 182 (330)
T ss_pred hhhhc-------CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCC----ccccccccc-----CC
Confidence 55543 567899999999999999999999999999999999999999986541 123333332 57
Q ss_pred cEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHH
Q 019899 165 RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVA 244 (334)
Q Consensus 165 ~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (334)
++++++||||.+|++|+|+||+++ ++++.+.+.+....++.+.+.|.++..++....+ ..+.++++.++++++.+
T Consensus 183 ~vi~~~SfSK~~gl~GlRiG~~v~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~----~~~~~~~~~~~r~~l~~ 257 (330)
T PRK05664 183 GLIVLRSFGKFFGLAGARLGFVLA-EPALLRALAELLGPWTVSGPTRWLAQAALADTPW----QRRQRERLLAASQRLAA 257 (330)
T ss_pred CEEEEeeccccccCCCcceEEEEe-CHHHHHHHHHhcCCCCCCHHHHHHHHHHHhChHH----HHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999 7899999988777778899999999999976443 35667889999999999
Q ss_pred HHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHHH
Q 019899 245 GLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIE 324 (334)
Q Consensus 245 ~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l~ 324 (334)
.|++.+++.. +...+|+|++.+ ++.++.+. +.++||.+.+ |+ .++++|++++ .++++.+++++
T Consensus 258 ~L~~~~~~~~-~~~~~f~~~~~~---------~~~~~~~~-l~~~gi~v~~---f~--~~~~iRis~~-~~~~~~~~l~~ 320 (330)
T PRK05664 258 LLRRHGLTPA-GGCALFQWVRTE---------DAAALHEF-LARRGILTRL---FE--QPASLRFGLP-ADEADWARLDQ 320 (330)
T ss_pred HHHHCCCccc-CCcceEEEEecC---------CHHHHHHH-HHHCCeEEEE---CC--CCCeEEEECC-CCHHHHHHHHH
Confidence 9999876522 122367787764 23577777 5558999974 43 3579999998 46778889988
Q ss_pred HHHHHHHH
Q 019899 325 RIQKVAET 332 (334)
Q Consensus 325 ~l~~~~~~ 332 (334)
.|+++.++
T Consensus 321 al~~~~~~ 328 (330)
T PRK05664 321 ALLAYRKE 328 (330)
T ss_pred HHHHHHhh
Confidence 88877654
No 99
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=1.1e-38 Score=283.68 Aligned_cols=288 Identities=24% Similarity=0.392 Sum_probs=237.2
Q ss_pred hhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHH
Q 019899 4 FMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITA 83 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~ 83 (334)
.+++.+++.+++++++|++++|+++++..++.+++++||+|++++|+|+.+...++ ..|.+++.+++. .++.+|+++
T Consensus 58 ~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l~~~gd~v~~~~p~y~~~~~~~~-~~g~~~~~~~~~--~~~~~d~~~ 134 (346)
T TIGR01141 58 ELKQALADYYGVDPEQILLGNGSDEIIELLIRAFLEPGDAVLVPPPTYSMYEISAK-IHGAEVVKVPLD--EDGQLDLED 134 (346)
T ss_pred HHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHH-HcCCeEEEeccC--CCCCCCHHH
Confidence 35566666677888999999999999999999999999999999999998887777 889999999984 346789999
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCC
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDK 163 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (334)
+++++++ +++++++++|+||||.++|.+++.++++.|+ +++++|+|++|+.+.+.+ ...+.. .. .
T Consensus 135 l~~~~~~------~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~-~~~~~~--~~-----~ 199 (346)
T TIGR01141 135 ILVAIDD------KPKLVFLCSPNNPTGNLLSRSDIEAVLERTP-EDALVVVDEAYGEFSGEP-STLPLL--AE-----Y 199 (346)
T ss_pred HHHhcCC------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCcEEEEECchhhhcCCc-cHHHHH--hh-----C
Confidence 9997654 7899999999999999999888888888877 799999999999766432 111211 11 4
Q ss_pred CcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHH
Q 019899 164 DRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFV 243 (334)
Q Consensus 164 ~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (334)
+++++++|+||.+|++|+|+||+++ ++++++.++.....++.++++|.++..++...+ +..+.+++++++++++.
T Consensus 200 ~~~i~~~S~sK~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~l~ 274 (346)
T TIGR01141 200 PNLIVLRTLSKAFGLAGLRIGYAIA-NAEIIDALNKVRAPFNLSRLAQAAAIAALRDDD----FIEKTVEEINAERERLY 274 (346)
T ss_pred CCEEEEehhhHhhhchhhhceeeec-CHHHHHHHHhccCCCCCCHHHHHHHHHHhCCHH----HHHHHHHHHHHHHHHHH
Confidence 5789999999999889999999998 888999998877778889999999999987643 45677888899999999
Q ss_pred HHHHhC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHH
Q 019899 244 AGLKQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLV 322 (334)
Q Consensus 244 ~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~ 322 (334)
+.|+++ |+++. +.+++++|++++. ++.++...|. ++||.+.||..|+.. ++++|++++ ++++++++
T Consensus 275 ~~L~~~~g~~~~-~~~g~~~~~~~~~--------~~~~~~~~L~-~~gI~v~~g~~f~~~-~~~iRls~~--~~~~i~~~ 341 (346)
T TIGR01141 275 DGLKKLPGLEVY-PSDANFVLIRFPR--------DADALFEALL-EKGIIVRDLNSYPGL-PNCLRITVG--TREENDRF 341 (346)
T ss_pred HHHHhcCCCEEC-CCcCCEEEEecCC--------CHHHHHHHHH-HCCeEEEeCCCcCCC-CCeEEEecC--CHHHHHHH
Confidence 999887 77754 4467889998874 2357888755 589999999988543 789999988 78899998
Q ss_pred HHHHH
Q 019899 323 IERIQ 327 (334)
Q Consensus 323 l~~l~ 327 (334)
++.|+
T Consensus 342 ~~~l~ 346 (346)
T TIGR01141 342 LAALR 346 (346)
T ss_pred HHHhC
Confidence 88763
No 100
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=9.8e-39 Score=284.48 Aligned_cols=289 Identities=19% Similarity=0.300 Sum_probs=232.4
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITAL 84 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l 84 (334)
+++.+++.+++++++|++++|+++++..++..++++||+|+++.|+|..+...++ ..|.+++.+++.+ ++.+|++++
T Consensus 62 lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~~~~~gd~Vli~~p~y~~~~~~~~-~~g~~~~~v~~~~--~~~~~~~~l 138 (352)
T PRK03321 62 LRAALAEHLGVPPEHVAVGCGSVALCQQLVQATAGPGDEVIFAWRSFEAYPILVQ-VAGATPVQVPLTP--DHTHDLDAM 138 (352)
T ss_pred HHHHHHHHhCcCHHHEEECCCHHHHHHHHHHHhcCCCCEEEeCCCCHHHHHHHHH-HcCCEEEEccCCC--CCCCCHHHH
Confidence 4555666667888999999999999999999999999999999999998887777 8899999999742 367899999
Q ss_pred HHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCC
Q 019899 85 DQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKD 164 (334)
Q Consensus 85 ~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (334)
++++++ +++++++++|+||||.++|.+++.++++.| +++++||+||+|+++.+.+....++..... .+
T Consensus 139 ~~~~~~------~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~-~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-----~~ 206 (352)
T PRK03321 139 AAAITD------RTRLIFVCNPNNPTGTVVTPAELARFLDAV-PADVLVVLDEAYVEYVRDDDVPDGLELVRD-----HP 206 (352)
T ss_pred HHhhcc------CCCEEEEeCCCCCcCCCcCHHHHHHHHHhC-CCCeEEEEechHHHhccCcCCCcHHHHHhh-----CC
Confidence 998875 789999999999999999987777777765 479999999999998886543333333332 57
Q ss_pred cEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHH
Q 019899 165 RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVA 244 (334)
Q Consensus 165 ~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (334)
++++++|+||.+|++|+|+||+++ ++++++.+.+....++.+++.|.++..++...+ .+.+ ..+.+.++++.+.+
T Consensus 207 ~vi~~~S~SK~~g~~GlRiG~~v~-~~~~~~~~~~~~~~~~~s~~~q~~a~~~l~~~~---~~~~-~~~~~~~~r~~~~~ 281 (352)
T PRK03321 207 NVVVLRTFSKAYGLAGLRVGYAVG-HPEVIAALRKVAVPFSVNSLAQAAAIASLAAED---ELLE-RVDAVVAERDRVRA 281 (352)
T ss_pred CEEEEecchHHhhhHHHhhhhhcC-CHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCHH---HHHH-HHHHHHHHHHHHHH
Confidence 899999999999999999999998 789999998877778889999998888886533 2222 33344556677889
Q ss_pred HHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHHH
Q 019899 245 GLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIE 324 (334)
Q Consensus 245 ~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l~ 324 (334)
.|++.|+.... .+|+|+|++++. +..++.+.| +++||.+.| |+ +.++||+++ ++++.+++++
T Consensus 282 ~L~~~~~~~~~-~~g~~i~i~l~~--------~~~~~~~~l-~~~gI~v~~---~~---~~~iRi~~~--~~~~~~~~~~ 343 (352)
T PRK03321 282 ALRAAGWTVPP-SQANFVWLPLGE--------RTADFAAAA-AEAGVVVRP---FA---GEGVRVTIG--APEENDAFLR 343 (352)
T ss_pred HHHHCCCccCC-CCCCEEEEeCCC--------CHHHHHHHH-HHCCEEEEc---cC---CCcEEEeeC--CHHHHHHHHH
Confidence 99888877544 467889998853 235788885 668999987 32 356999997 8999999999
Q ss_pred HHHHHHH
Q 019899 325 RIQKVAE 331 (334)
Q Consensus 325 ~l~~~~~ 331 (334)
+|++++.
T Consensus 344 al~~~~~ 350 (352)
T PRK03321 344 AARAWRA 350 (352)
T ss_pred HHHHHhc
Confidence 9998764
No 101
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=6.2e-38 Score=276.35 Aligned_cols=277 Identities=21% Similarity=0.332 Sum_probs=225.3
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITAL 84 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l 84 (334)
+++.+++.+++++++|++|+|+++++..+... +.+| +|++++|+|..+...++ ..|.+++.++ |++++
T Consensus 52 lr~~la~~~~~~~~~i~~t~G~~~~i~~~~~~-l~~g-~vl~~~p~y~~~~~~~~-~~g~~~~~~~---------d~~~l 119 (330)
T TIGR01140 52 LRAAAAAYYGLPAASVLPVNGAQEAIYLLPRL-LAPG-RVLVLAPTYSEYARAWR-AAGHEVVELP---------DLDRL 119 (330)
T ss_pred HHHHHHHHhCCChhhEEECCCHHHHHHHHHHH-hCCC-eEEEeCCCcHHHHHHHH-HcCCEEEEeC---------CHHHH
Confidence 34444455567889999999999999998666 4677 69999999999999998 8999998886 67888
Q ss_pred HHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCC
Q 019899 85 DQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKD 164 (334)
Q Consensus 85 ~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (334)
++.++ +++++++++|+||||.+++.+++++|+++|+++|++||+|++|..+.+.. ++..... ..+
T Consensus 120 ~~~~~-------~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~----~~~~~~~----~~~ 184 (330)
T TIGR01140 120 PAALE-------ELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDA----SLAPQAA----RFP 184 (330)
T ss_pred Hhhcc-------cCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCcc----chhhHhc----cCC
Confidence 88874 46789999999999999999999999999999999999999999876531 2222211 157
Q ss_pred cEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHH
Q 019899 165 RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVA 244 (334)
Q Consensus 165 ~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (334)
+++++.|+||.+|++|+|+||+++ ++++++.+......++.++++|.++..++.+.++ ..+.+++++.+++.+.+
T Consensus 185 ~~i~~~S~SK~~g~~G~R~G~i~~-~~~~~~~l~~~~~~~~~s~~~q~~~~~~l~~~~~----~~~~~~~~~~~~~~l~~ 259 (330)
T TIGR01140 185 GLVVLRSLTKFFGLAGLRLGFVVA-HPALLARLREALGPWTVNGPARAAGRAALADTAW----QAATRARLAAERARLAA 259 (330)
T ss_pred CEEEEEecchhhcCchhhhhheeC-CHHHHHHHHhcCCCCCchHHHHHHHHHHHhchHH----HHHHHHHHHHHHHHHHH
Confidence 899999999999999999999998 7889899988877788899999999999986543 34567889999999999
Q ss_pred HHHhCC-CcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHH
Q 019899 245 GLKQLG-IRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVI 323 (334)
Q Consensus 245 ~l~~~g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l 323 (334)
.|++++ ++. .+.+++|+|++++. ..++.++|++ +||.+.||..|+....+++|++++ ...++ +.++
T Consensus 260 ~L~~~~~~~~-~~~~~~f~~~~~~~---------~~~l~~~l~~-~gi~v~pg~~f~~~~~~~iRi~~~-~~~~~-~~~~ 326 (330)
T TIGR01140 260 LLARLGGLEV-VGGTALFLLVRTPD---------AAALHEALAR-RGILIRDFDNFPGLDPRYLRFALP-TDEEN-DRLE 326 (330)
T ss_pred HHHhCCCceE-CCCCCeEEEEEcCC---------HHHHHHHHHH-CCEEEEECCCCCCCCCCEEEEEec-CHHHH-HHHH
Confidence 999986 544 44578999998763 2578888665 799999999986445679999998 33333 6666
Q ss_pred HHH
Q 019899 324 ERI 326 (334)
Q Consensus 324 ~~l 326 (334)
++|
T Consensus 327 ~~l 329 (330)
T TIGR01140 327 EAL 329 (330)
T ss_pred Hhh
Confidence 654
No 102
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-37 Score=263.79 Aligned_cols=307 Identities=21% Similarity=0.273 Sum_probs=245.2
Q ss_pred cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc---C
Q 019899 19 QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKR---G 95 (334)
Q Consensus 19 ~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~---~ 95 (334)
+|++|+|.|.++..+++.++++||.|+++.++|++..+.++ ..|+++++|++ +..++++|.|++.+.+.+.. .
T Consensus 126 diiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~-a~gv~~ipv~m---d~~Gi~pE~l~~il~~w~~~~~k~ 201 (472)
T KOG0634|consen 126 DIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSME-ALGVKIIPVKM---DQDGIDPESLEEILSNWKPGSYKK 201 (472)
T ss_pred eEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhcc-ccCceEEeccc---cCCCCCHHHHHHHHhcCCcccccC
Confidence 89999999999999999999999999999999999999999 99999999997 56689999999999877543 2
Q ss_pred CceeEEEEeCC--CCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCC--------CCcch----hhhhhhc-cc
Q 019899 96 VKVRGILICNP--ANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGN--------EEFVS----MAEILEA-EE 160 (334)
Q Consensus 96 ~~~~~i~~~~p--~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~--------~~~~~----~~~~~~~-~~ 160 (334)
.+++ |+++.| +||||..++.+..++|.++|++|+++||+||.|..+.++. .+..+ ...+.+. ..
T Consensus 202 ~~p~-vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sfls 280 (472)
T KOG0634|consen 202 PKPH-VLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLS 280 (472)
T ss_pred CCCe-EEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCccc
Confidence 3466 777878 8999999999999999999999999999999999887752 11111 1111111 12
Q ss_pred cC-CCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc--cCCChHHHHHHHHhhCChH--HHHHHHHHHHHHH
Q 019899 161 VD-KDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--CSISAPTQRLLISMLSDTK--FIQEYLETNKRRI 235 (334)
Q Consensus 161 ~~-~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~ 235 (334)
++ .++|+-..||||.++ ||+|+||+.+ ++.+++++-..... .++|...|..+.+++.... ...+|+.+.+..+
T Consensus 281 lDtdGrVIr~dSFSKiia-PGlRlG~it~-~~~~l~ril~~ae~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Y 358 (472)
T KOG0634|consen 281 LDTDGRVIRNDSFSKIIA-PGLRLGWITG-NSLFLKRILDLAEVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSY 358 (472)
T ss_pred ccccccEEeccchhhhhc-CcceeEEeec-CHHHHHHHhhhcceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 899999999999997 9999999998 77776766554332 3467778877777776421 1247789999999
Q ss_pred HHHHHHHHHHHHhC---C-CcccCCCceeEEeeecCCcCCC---CChhhHHHHHHHHHHhcCeEEcCCCCcCCC-C---C
Q 019899 236 KKLYDSFVAGLKQL---G-IRCSESSAGLYCWADMSGLIPS---YSEKGELELWDKLLNIAKINVTPGSACHCI-E---P 304 (334)
Q Consensus 236 ~~~~~~~~~~l~~~---g-~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~-~---~ 304 (334)
..+++.+...|.+. . +++..|.+|||+|++++ .+.. +..-...+.....+.++||.+.+|..|... . +
T Consensus 359 t~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~-~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~ 437 (472)
T KOG0634|consen 359 TERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIP-YINFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWS 437 (472)
T ss_pred HHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEec-ccccccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCC
Confidence 99999999999875 4 67779999999999998 1111 111124566666678899999999998654 1 2
Q ss_pred -CeEEEEecCCCcccHHHHHHHHHHHHHHc
Q 019899 305 -GWFRCCFTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 305 -~~iRi~~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
-++|++++..++++++++++++..+++++
T Consensus 438 kiffRls~a~a~~e~l~~g~~rf~~~ike~ 467 (472)
T KOG0634|consen 438 KIFFRLSIAFAEPEKLDEGIERFGSVIKEH 467 (472)
T ss_pred cceEEEEeecCCHHHHHHHHHHHHHHHHHH
Confidence 38999999779999999999999999875
No 103
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.4e-37 Score=270.11 Aligned_cols=276 Identities=19% Similarity=0.331 Sum_probs=216.7
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITAL 84 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l 84 (334)
+++.+++.+++++++|++|+|+++++..++..+ +||+|+++.|+|+.+...++ ..|.+++.++++ +++.+|++.+
T Consensus 60 lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~--~gd~V~v~~P~y~~~~~~~~-~~g~~~~~v~~~--~~~~~d~~~l 134 (337)
T PRK03967 60 LREAIAEFYGLDAENIAVGNGSDELISYLVKLF--EGKHIVITPPTFGMYSFYAK-LNGIPVIDVPLK--EDFTIDGERI 134 (337)
T ss_pred HHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHh--CCCeEEEeCCChHHHHHHHH-HcCCeEEEeecC--CCCCcCHHHH
Confidence 455555556688999999999999999988776 79999999999998888777 899999999984 4468999999
Q ss_pred HHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCC
Q 019899 85 DQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKD 164 (334)
Q Consensus 85 ~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (334)
++.+. +++++++++|+||||.+++.+++.++ + ++++++|+||+|.+|.. .... .... ..+
T Consensus 135 ~~~~~-------~~~~v~~~~P~NPtG~~~~~~~l~~i---~-~~~~~ii~De~y~~~~~--~~~~---~~~~----~~~ 194 (337)
T PRK03967 135 AEKAK-------NASAVFICSPNNPTGNLQPEEEILKV---L-ETGKPVVLDEAYAEFSG--KSLI---GLID----EYP 194 (337)
T ss_pred HHhcc-------CCCEEEEeCCCCCCCCCCCHHHHHHH---H-hcCCEEEEECchhhhcc--cchH---HHHh----hCC
Confidence 87642 67889999999999999996655554 4 47999999999998652 1222 2221 146
Q ss_pred cEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHH
Q 019899 165 RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVA 244 (334)
Q Consensus 165 ~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (334)
++++++||||.+|++|+|+||+++ ++++++.+.+....++.+.+.|.++..+++..++ ..+..+.+.++++.+.+
T Consensus 195 ~vi~l~S~SK~~~l~GlRiG~iv~-~~~~i~~~~~~~~~~~~~~~~q~~~~~~l~~~~~----~~~~~~~~~~~r~~l~~ 269 (337)
T PRK03967 195 NLILLRTFSKAFGLAGIRAGYAIA-NEEIIDALYRIKPPFSLNILTMKIVRLALDHYDL----IEERIDYIIKERERVRR 269 (337)
T ss_pred CEEEEecchHhhcchhhhheeeec-CHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCHHH----HHHHHHHHHHHHHHHHH
Confidence 799999999999999999999998 8899999988777788899999999999976443 33444455666778888
Q ss_pred HHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHHH
Q 019899 245 GLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIE 324 (334)
Q Consensus 245 ~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l~ 324 (334)
.|.+. ..+.+++|+|++++ +.+.|+ ++||.++++... ..+++|++++ ++++.+++++
T Consensus 270 ~L~~~----~~~~~~~~~~~~~~-------------~~~~l~-~~gi~v~~~~~~---~~~~~Ri~~~--~~~~~~~l~~ 326 (337)
T PRK03967 270 ELGEY----AYPSDANFLLLKLD-------------AYDYLL-ENGIVVRKLSGR---LEGHIRVTVG--KREENDEFIK 326 (337)
T ss_pred HhccC----cCCCCCcEEEEhHH-------------HHHHHH-HCCEEEEeCCCC---CCCeEEEecC--CHHHHHHHHH
Confidence 88764 24578889998763 456645 479999875422 3579999998 6788888999
Q ss_pred HHHHHHHHc
Q 019899 325 RIQKVAETC 333 (334)
Q Consensus 325 ~l~~~~~~~ 333 (334)
.|+++.+.+
T Consensus 327 ~l~~~~~~~ 335 (337)
T PRK03967 327 ALKEIKEGY 335 (337)
T ss_pred HHHHHHHhc
Confidence 998887764
No 104
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=3.1e-36 Score=263.34 Aligned_cols=255 Identities=22% Similarity=0.309 Sum_probs=197.4
Q ss_pred CcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 18 SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
++|++|+|+++++..++..+. +||+|++++|+|+.+...++ ..|.+++.++ +|++.+++.++ +
T Consensus 55 ~~I~vt~G~~~al~~~~~~~~-~gd~vlv~~P~y~~~~~~~~-~~g~~~~~~~--------~d~~~l~~~~~-------~ 117 (311)
T PRK08354 55 EPIVITAGITEALYLIGILAL-RDRKVIIPRHTYGEYERVAR-FFAARIIKGP--------NDPEKLEELVE-------R 117 (311)
T ss_pred CCEEECCCHHHHHHHHHHhhC-CCCeEEEeCCCcHHHHHHHH-HcCCEEeecC--------CCHHHHHHhhc-------C
Confidence 579999999999998886544 89999999999999999999 9999997764 46788887765 3
Q ss_pred eeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEecccccCC
Q 019899 98 VRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLS 177 (334)
Q Consensus 98 ~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~ 177 (334)
++++++++|+||||.+++.+++++|+++|+++++++|+||+|.+|.+++.. . . .+++++++||||.++
T Consensus 118 ~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~---~----~-----~~~vi~~~S~SK~~~ 185 (311)
T PRK08354 118 NSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPES---P----E-----GENIIKLRTFTKSYG 185 (311)
T ss_pred CCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhccccccc---c----C-----CCcEEEEeccHhhcC
Confidence 567999999999999999999999999999999999999999998875421 1 1 568999999999999
Q ss_pred CCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC
Q 019899 178 LPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESS 257 (334)
Q Consensus 178 ~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 257 (334)
++|+|+||+++ +.+.++.....+..+...+.++..++.. . .+++.+.++.+.+.++.+.+.+ ...+.
T Consensus 186 l~GlRiG~~v~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~l~~~l------~~~~~ 252 (311)
T PRK08354 186 LPGIRVGYVKG----FEEAFRSVRMPWSIGSTGYAFLEFLIED-D--FEHLRKTMPLIWREKERFEKAL------YVKSD 252 (311)
T ss_pred Cccceeeeeee----hHHHHHHcCCCccCCHHHHHHHHHHHHh-H--HHHHHHHHHHHHHHHHHHHHhc------CCCCC
Confidence 99999999998 4566766666777777777777776653 2 1333444555555555444433 23456
Q ss_pred ceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHHHHHHHH
Q 019899 258 AGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKV 329 (334)
Q Consensus 258 ~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l~~l~~~ 329 (334)
+++++ ++++. +.++++.| .++||.+.||..|+. ++++||+++ .+++.+++++.|+++
T Consensus 253 ~~~~~-~~~~~---------~~~~~~~l-~~~gv~v~~g~~f~~--~~~iRi~~~--~~~~~~~l~~al~~~ 309 (311)
T PRK08354 253 ANFFI-KDVGD---------AEKFVEFL-KRNGILVRDCTSFGL--PGYIRFSVR--DREENEKLIRALREW 309 (311)
T ss_pred CcEEE-EECCC---------HHHHHHHH-HHCCeEEEecccCCC--CCeEEEEeC--CHHHHHHHHHHHHHh
Confidence 66655 55542 35777775 558999999999863 689999998 566677777777654
No 105
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.5e-36 Score=264.63 Aligned_cols=261 Identities=18% Similarity=0.305 Sum_probs=206.9
Q ss_pred CCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 15 FDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 15 ~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
+++++|++|+|+++++..++.++ |.|++++|+|+.+...++ ..|.+++.+|+++ ++.++... ++
T Consensus 74 ~~~~~i~it~Ga~~~i~~~~~~~----d~v~v~~P~y~~~~~~~~-~~g~~~~~v~~~~--~~~~~~~~----~~----- 137 (335)
T PRK14808 74 LSKNNVSVGNGADEIIYVMMLMF----DRSVFFPPTYSCYRIFAK-AVGAKFLEVPLTK--DLRIPEVN----VG----- 137 (335)
T ss_pred CCcceEEEcCCHHHHHHHHHHHh----CcEEECCCCHHHHHHHHH-HcCCeEEEecCCC--cCCCChhH----cc-----
Confidence 78999999999999999999987 679999999999999999 9999999999843 33443221 21
Q ss_pred CCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEecccc
Q 019899 95 GVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSK 174 (334)
Q Consensus 95 ~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK 174 (334)
+++++++++|+||||.+++.+++++|+ +++++||+||+|.+|. +.... ++..+ .+++++++||||
T Consensus 138 --~~~~i~i~nP~NPTG~~~s~~~l~~l~----~~~~~ii~DE~Y~~f~--~~~~~---~~~~~----~~~vi~~~S~SK 202 (335)
T PRK14808 138 --EGDVVFIPNPNNPTGHVFEREEIERIL----KTGAFVALDEAYYEFH--GESYV---DLLKK----YENLAVIRTFSK 202 (335)
T ss_pred --CCCEEEEeCCCCCCCCCcCHHHHHHHH----hcCCEEEEECchhhhc--CCchH---HHHHh----CCCEEEEEechh
Confidence 468999999999999999988777775 4799999999999864 22222 22221 568999999999
Q ss_pred cCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc
Q 019899 175 DLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCS 254 (334)
Q Consensus 175 ~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 254 (334)
.++++|+|+||+++ ++++++.+.+....++.+.++|.++..++...+ +..+..+.+.++++++.+.|++.|+++.
T Consensus 203 ~~~l~GlRvG~~v~-~~~~~~~l~~~~~~~~~~~~~q~a~~~~l~~~~----~~~~~~~~~~~~r~~l~~~L~~~g~~~~ 277 (335)
T PRK14808 203 AFSLAAQRIGYVVS-SEKFIDAYNRVRLPFNVSYVSQMFAKVALDHRE----IFEERTKFIVEERERMKSALREMGYRIT 277 (335)
T ss_pred hccCcccceEEEEe-CHHHHHHHHHhcCCCCCCHHHHHHHHHHHhCHH----HHHHHHHHHHHHHHHHHHHHHHCCCEEC
Confidence 99999999999998 788999998777678889999998888876533 3455566777778899999999898877
Q ss_pred CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHHHHHHHH
Q 019899 255 ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKV 329 (334)
Q Consensus 255 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l~~l~~~ 329 (334)
.+.+ .|+|+.++.. +..++.+. +.++||.++. | .+++|++++ ++++.+++++.|+++
T Consensus 278 ~~~g-~f~~~~l~~~-------~~~~~~~~-l~~~Gi~V~~---~----~~~~Risi~--~~~~~~~~~~~l~~~ 334 (335)
T PRK14808 278 DSRG-NFVFIFMEKE-------EKERLLEH-LRAKNIAVRS---F----REGVRITIG--KREENDMILKELEVF 334 (335)
T ss_pred CCCC-eEEEEeCCCc-------cHHHHHHH-HHHCCeEEEE---C----CCCeEEecC--CHHHHHHHHHHHHhh
Confidence 7754 5678988742 23466666 5558999984 3 368999998 788899999988753
No 106
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=100.00 E-value=1.3e-34 Score=258.06 Aligned_cols=301 Identities=31% Similarity=0.516 Sum_probs=238.9
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccH
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
++++....+ +....+++++++|+++++..++.++.++||+|+++.++|.++...++ ..|.+++.++.++......+.
T Consensus 46 ~~~l~~~~~--~~~~~~~~~~~~~~t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~ 122 (350)
T cd00609 46 AEWLGRRGG--VDVPPEEIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEAAAR-LAGAEVVPVPLDEEGGFLLDL 122 (350)
T ss_pred HHHHHHHhC--CCCCcceEEEecCcHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHH-HCCCEEEEEecccccCCccCH
Confidence 344444443 34457799999999999999999999999999999999999999999 899999999985444333222
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
+.+++...+ +++++++++|+||||.++|.+++++|+++|+++|+++|+|++|+.+.+.+..........
T Consensus 123 ~~~~~~~~~------~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~----- 191 (350)
T cd00609 123 ELLEAAKTP------KTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPPPALALLD----- 191 (350)
T ss_pred HHHHhhcCc------cceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccccccCcC-----
Confidence 444444433 789999999999999999999999999999999999999999998776544332111121
Q ss_pred CCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc--cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHH
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLY 239 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (334)
..+.++++.|++|.++.+|.++|+++++++++.+.++..... ++.+...+.++..++.... ++..+.++++.+++
T Consensus 192 ~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~ 268 (350)
T cd00609 192 AYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLLPYTTSGPSTLSQAAAAAALDDGE---EHLEELRERYRRRR 268 (350)
T ss_pred ccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCcH---HHHHHHHHHHHHHH
Confidence 267789999999999889999999998443888888766544 5778888888888887653 55677888999999
Q ss_pred HHHHHHHHhCCCcc-cCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCccc
Q 019899 240 DSFVAGLKQLGIRC-SESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHED 318 (334)
Q Consensus 240 ~~~~~~l~~~g~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~ 318 (334)
+++.+.|++.+... ..+..++++|++++... ..+...++++++||.+.++..|....+.++|++++.. ++|
T Consensus 269 ~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~~~-------~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~-~~~ 340 (350)
T cd00609 269 DALLEALKELGPLVVVKPSGGFFLWLDLPEGD-------DEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP-EEE 340 (350)
T ss_pred HHHHHHHHhcCCccccCCCccEEEEEecCCCC-------hHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC-HHH
Confidence 99999999986554 56678899999987641 2456677788899999998877644578999999955 999
Q ss_pred HHHHHHHHH
Q 019899 319 IPLVIERIQ 327 (334)
Q Consensus 319 l~~~l~~l~ 327 (334)
++.++++|+
T Consensus 341 i~~~~~al~ 349 (350)
T cd00609 341 LEEALERLA 349 (350)
T ss_pred HHHHHHHhh
Confidence 999999886
No 107
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.1e-32 Score=215.16 Aligned_cols=297 Identities=19% Similarity=0.319 Sum_probs=235.3
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCC-CeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHG-NALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITA 83 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~g-d~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~ 83 (334)
++...++--+..+|+|++..|+-+.+.+++++.|.|| ++|++-.|+|.-|.-.+. ..+++|+.+|+ +.+|++|+++
T Consensus 74 ls~a~~~dkpLt~dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~-iNd~eVvkvpl--~pdF~lnvda 150 (375)
T KOG0633|consen 74 LSDALAQDKPLTSDNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYVVDAA-INDAEVVKVPL--NPDFSLNVDA 150 (375)
T ss_pred hhhhcccCCCCCccceEEecCcHHHHHHHHhheecCCccceeecCCcceeEEEEee-cCCceEEEecC--CCCccccHHH
Confidence 3444444467889999999999999999999999999 899999999998887777 78999999999 4578999999
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCC
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDK 163 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (334)
+.+.++.. ..+|++++++|+||||..+..+++.+|.+.- .+.+|++||+|.+|+-.+. -..+.. ++
T Consensus 151 i~evl~~d----s~iK~~F~tSPgNPtg~~ik~~di~KiLe~p--~nglVVvDEAYidFsg~~S----~~~lV~----kY 216 (375)
T KOG0633|consen 151 IAEVLELD----SKIKCIFLTSPGNPTGSIIKEDDILKILEMP--DNGLVVVDEAYIDFSGVES----RMKLVK----KY 216 (375)
T ss_pred HHHHHhcc----ccceEEEEcCCCCCCcccccHHHHHHHHhCC--CCcEEEEeeeeEeeccccc----cchHhH----hC
Confidence 99998763 4799999999999999999999999998743 3889999999999763222 222333 27
Q ss_pred CcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHH
Q 019899 164 DRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFV 243 (334)
Q Consensus 164 ~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (334)
.+.+++.++||++|++|+|+|+... ...+.+.+-+.+++++.|.+...++..++.... -+.++..++.+.+.+.++.
T Consensus 217 pNLivlqTlSKsfGLAGiRvG~~~~-~~~ia~iln~~KaPYNiS~~~s~~AL~Als~~n--~kkme~~rdaiv~er~RL~ 293 (375)
T KOG0633|consen 217 PNLIVLQTLSKSFGLAGIRVGYGAF-PLSIAEILNRAKAPYNISVAGSVAALAALSDSN--GKKMEDVRDAIVRERERLF 293 (375)
T ss_pred CceeehhhhhhhcCcceeEeecccc-cHHHHHHHHhccCCccccchhHHHHHHhcCccc--chHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999998 888999999999999999888888888887432 2345677788888889999
Q ss_pred HHHHhCC-Cc-ccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcC-CCCcCCCCCCeEEEEecCCCcccHH
Q 019899 244 AGLKQLG-IR-CSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTP-GSACHCIEPGWFRCCFTSLTHEDIP 320 (334)
Q Consensus 244 ~~l~~~g-~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~-g~~~~~~~~~~iRi~~~~~~~~~l~ 320 (334)
..|.+.. +. +..+....|+.+++....+ . -+..+...++...|+.++- |+.-+. .+++|++++ ++|+-.
T Consensus 294 keLt~v~~~~~~~gg~daNFiLi~v~~~~n---~-~akkly~q~at~~gVvVRfrgse~~c--~G~lRitvG--t~Eent 365 (375)
T KOG0633|consen 294 KELTEVPFLNDYPGGSDANFILIEVTGGDN---G-MAKKLYKQDATKMGVVVRFRGSEEGC--KGYLRITVG--TPEENT 365 (375)
T ss_pred HHhhcCccccCCCCcccccEEEEEEcCCCc---H-HHHHHHHHHHHhcceEEEEcCCcccc--ceeEEEEcC--Ccccch
Confidence 9998863 32 3344444455577664322 2 2345666667779999873 333222 689999999 889999
Q ss_pred HHHHHHHHH
Q 019899 321 LVIERIQKV 329 (334)
Q Consensus 321 ~~l~~l~~~ 329 (334)
.+++.++++
T Consensus 366 vL~k~~K~~ 374 (375)
T KOG0633|consen 366 VLMKCLKQF 374 (375)
T ss_pred HHHHHHHhh
Confidence 999999876
No 108
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=5.7e-32 Score=245.13 Aligned_cols=293 Identities=17% Similarity=0.193 Sum_probs=219.2
Q ss_pred hhhhhhcCCCCC-CCCcEEEecCcHHHHHHHHHHh----cCCCCeEEecCCCCCCh----hhhhhhccCcEEEEEeCCCC
Q 019899 4 FMSQVLGQAVSF-DPSQIVLTAGATPAVEILCFCL----ADHGNALLVPSPYYPGF----DRDIRFRTGVELIPVHCRST 74 (334)
Q Consensus 4 ~~~~~~~~~~~~-~~~~i~~~~g~~~~~~~~~~~l----~~~gd~vl~~~p~~~~~----~~~~~~~~g~~v~~v~~~~~ 74 (334)
.+++.+++.+++ ++++|++++|++++++.++.++ +++||+|++++++|++. ...++ ..|.+++.++++
T Consensus 67 ~~r~~la~~~g~~~~~~i~~~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~-~~g~~v~~v~~~-- 143 (401)
T PRK10874 67 AAREQVAQLLNAPDAKNIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQ-QTGAKVVKLPLG-- 143 (401)
T ss_pred HHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHH-HhCCEEEEEecC--
Confidence 355667777888 7889999999999999999997 37899999999999763 33445 679999999984
Q ss_pred CCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhh
Q 019899 75 DNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAE 154 (334)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~ 154 (334)
.++.+|++++++++++ +++++++++|+||||.++| +++|+++|+++|+++++|++|+...+ ..++..
T Consensus 144 ~~~~~d~~~l~~~i~~------~t~lv~i~~~~n~tG~~~~---~~~i~~l~~~~g~~~ivD~a~~~g~~----~~~~~~ 210 (401)
T PRK10874 144 ADRLPDVDLLPELITP------RTRILALGQMSNVTGGCPD---LARAITLAHQAGMVVMVDGAQGAVHF----PADVQA 210 (401)
T ss_pred CCCcCCHHHHHHhcCc------CcEEEEEeCCcccccCcCC---HHHHHHHHHHcCCEEEEECCcccccc----cCCchh
Confidence 4567899999999976 8899999999999999999 88999999999999999999865322 122211
Q ss_pred hhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh-----------------------cccCCChHHH
Q 019899 155 ILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT-----------------------RFCSISAPTQ 211 (334)
Q Consensus 155 ~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~ 211 (334)
.+.++++.|++|.+|++| +|+++. ++++++.+.... ..++.+...+
T Consensus 211 --------~~~d~~~~s~~K~~gp~G--~G~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~ 279 (401)
T PRK10874 211 --------LDIDFYAFSGHKLYGPTG--IGVLYG-KSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGV 279 (401)
T ss_pred --------cCCCEEEEecccccCCCc--cEEEEE-chHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHH
Confidence 356678899999888666 599988 777766653211 0123444566
Q ss_pred HHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcC
Q 019899 212 RLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAK 290 (334)
Q Consensus 212 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g 290 (334)
.++..+++... +....+..++..+.++++.+.|+++ |++...+..+.++++.++.. +..++.+. |+++|
T Consensus 280 ~al~~al~~l~--~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~i~~~~~~~~-------~~~~~~~~-L~~~g 349 (401)
T PRK10874 280 IGLSAALEWLA--DIDINQAESWSRSLATLAEDALAKLPGFRSFRCQDSSLLAFDFAGV-------HHSDLVTL-LAEYG 349 (401)
T ss_pred HHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCcEEEEEECCc-------CHHHHHHH-HHHCC
Confidence 66666664321 1223456677888889999999887 78776555555566666542 23567766 56689
Q ss_pred eEEcCCCCcCC------CCCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 291 INVTPGSACHC------IEPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 291 i~v~~g~~~~~------~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
|.+.+|..|.. ...+++|+|++. .+++|++++++.|+++++.+
T Consensus 350 I~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 350 IALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVDRALELL 399 (401)
T ss_pred cEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHHHHHHHHHHHh
Confidence 99999887642 125789999996 59999999999999988764
No 109
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=5.1e-32 Score=226.86 Aligned_cols=329 Identities=22% Similarity=0.354 Sum_probs=247.9
Q ss_pred ChhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc-CCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccc
Q 019899 1 MAGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLA-DHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~-~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~ 79 (334)
+|+|+.+|-| +++++++|++|.|++.|+..++..++ .+.+.|++|-|.|+-|...+. ..|...+.+-++++.+|.+
T Consensus 122 VA~~I~rRDG--~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYsAti~-l~~~~~v~YyLdEe~~W~l 198 (475)
T KOG0258|consen 122 VAEFIERRDG--IPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYSATIS-LLGGTQVPYYLDEESNWSL 198 (475)
T ss_pred HHHHHHhccC--CCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhHHHHH-HhCCcccceeeccccCCCC
Confidence 5789998877 89999999999999999999998885 567899999999999999999 8888888888888999999
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCC-Ccchhhhhhhc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNE-EFVSMAEILEA 158 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~ 158 (334)
|.++|++.+++++ .+-++++++++||.||||.+++.+.+++|+.+|.++++.++.||+|++..|... .+-+++....+
T Consensus 199 d~~el~~~~~eA~-k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~e 277 (475)
T KOG0258|consen 199 DVAELERSVDEAR-KGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHE 277 (475)
T ss_pred CHHHHHHHHHHHh-ccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHH
Confidence 9999999999987 667899999999999999999999999999999999999999999999998754 67777776665
Q ss_pred cc-cCCCcE--EEEecccccC-CCCCceEEEEe--ecCHHHHHHHHHhhcc-cCCChHHHHHHHHhhCC-------hHHH
Q 019899 159 EE-VDKDRV--HIIYGLSKDL-SLPGFRTGVIY--SYNESVLAAAKKLTRF-CSISAPTQRLLISMLSD-------TKFI 224 (334)
Q Consensus 159 ~~-~~~~~~--~~~~s~sK~~-~~~g~r~g~i~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~-------~~~~ 224 (334)
.+ ...+++ +.++|.||.+ |-+|.|.||.- -.+++..+.+.+.... ...+...|...-....- .+..
T Consensus 278 mg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~si~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~ 357 (475)
T KOG0258|consen 278 MGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLASIKLCPQVSGQKLVDLVVNPPKPGDPSYDLF 357 (475)
T ss_pred hcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHHHhhhhcCCccchhhhceecCCCCCCCcchhhh
Confidence 11 112343 5567889888 66789999963 3577777777665443 34444555544444431 1111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCceeEEeeecCCcCC------CCChhhHHHHHHHHHHhcCeEEcCCC
Q 019899 225 QEYLETNKRRIKKLYDSFVAGLKQL-GIRCSESSAGLYCWADMSGLIP------SYSEKGELELWDKLLNIAKINVTPGS 297 (334)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~ll~~~gi~v~~g~ 297 (334)
..........+++++..+.+.+..+ |+.+..+.|.||++-.+.-+.. ......+.-.+.+||+..||.+.||+
T Consensus 358 ~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn~~qGAMY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGS 437 (475)
T KOG0258|consen 358 SSEKDGILSSLRSRAKLTEDAFNSLEGISCNPVQGAMYLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGS 437 (475)
T ss_pred hhhhHhHHHHHHHHhHHHHHHHhhcCceeeccCccceeecccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCC
Confidence 2233556777888888888999887 8999999999998755432211 01112334467899999999999999
Q ss_pred CcCCCCCC-eEEEEecCCCcccHHHHHHHHHHHHHHc
Q 019899 298 ACHCIEPG-WFRCCFTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 298 ~~~~~~~~-~iRi~~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
.||..... ++|..+-....+-++++-+--.++++++
T Consensus 438 GFGQ~~GtyH~R~TiLp~~~~~i~~~~~fH~~f~~~Y 474 (475)
T KOG0258|consen 438 GFGQKEGTYHFRTTILPPGLEIIEKFKKFHAEFMDEY 474 (475)
T ss_pred CCCCCCceeEEEEeecCchhHHHHHHHHHHHHHHHhh
Confidence 99985443 5888875222233444444344444443
No 110
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=1.2e-31 Score=242.69 Aligned_cols=292 Identities=17% Similarity=0.172 Sum_probs=216.6
Q ss_pred hhhhhcCCCCCC-CCcEEEecCcHHHHHHHHHHh----cCCCCeEEecCCCCCCh----hhhhhhccCcEEEEEeCCCCC
Q 019899 5 MSQVLGQAVSFD-PSQIVLTAGATPAVEILCFCL----ADHGNALLVPSPYYPGF----DRDIRFRTGVELIPVHCRSTD 75 (334)
Q Consensus 5 ~~~~~~~~~~~~-~~~i~~~~g~~~~~~~~~~~l----~~~gd~vl~~~p~~~~~----~~~~~~~~g~~v~~v~~~~~~ 75 (334)
+++.+++.++++ +++|++|+|+|++++.++.++ +++||+|++++|+|++. ...++ ..|.+++.++++ .
T Consensus 65 ~r~~la~~~g~~~~~~i~~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~-~~g~~v~~v~~~--~ 141 (398)
T TIGR03392 65 ARQQVARFLNAPDAENIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQ-QTGAKVVKLPIG--A 141 (398)
T ss_pred HHHHHHHHhCCCCCCeEEEeCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHH-HcCcEEEEEecC--C
Confidence 556667777774 789999999999999999987 47899999999999873 33445 789999999984 3
Q ss_pred CccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhh
Q 019899 76 NFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEI 155 (334)
Q Consensus 76 ~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~ 155 (334)
++.+|++++++++++ +++++++++|+||||.+.| +++|+++|+++|+++++|++|+...+ ...+..
T Consensus 142 ~~~~~~~~l~~~i~~------~t~lv~i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~~----~~~~~~- 207 (398)
T TIGR03392 142 DLLPDIRQLPELLTP------RTRILALGQMSNVTGGCPD---LARAITLAHQYGAVVVVDGAQGVVHG----PPDVQA- 207 (398)
T ss_pred CCCcCHHHHHHHhcc------CceEEEEECccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcCCC----CCChhh-
Confidence 457899999999976 7899999999999999999 88999999999999999999975332 122221
Q ss_pred hhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh-----------------------cccCCChHHHH
Q 019899 156 LEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT-----------------------RFCSISAPTQR 212 (334)
Q Consensus 156 ~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~ 212 (334)
.+.++++.|++|.+|++| +||++. ++++.+.+.... ..++.+.....
T Consensus 208 -------~~~d~~~~s~~K~~gp~G--~G~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~ 277 (398)
T TIGR03392 208 -------LDIDFYAFSGHKLYGPTG--IGVLYG-KTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVI 277 (398)
T ss_pred -------cCCCEEEEecccccCCCc--eEEEEE-cHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHH
Confidence 345678889999888555 899998 677766653211 01233444555
Q ss_pred HHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCe
Q 019899 213 LLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKI 291 (334)
Q Consensus 213 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi 291 (334)
++..+++... +....+..++..+.++++.+.|+++ |+++..+..+.++++.++.. +..++... |+++||
T Consensus 278 a~~~al~~l~--~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~~~~~~i~~~~~~~~-------~~~~l~~~-L~~~gI 347 (398)
T TIGR03392 278 GLSAALEWLT--DIDIAAAEAWSVSLADLAEERLAQLPGFRSFRCPGSSLLAFDFAGV-------HHSDLAAL-LAESGI 347 (398)
T ss_pred HHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCcEEEEEeCCc-------CHHHHHHH-HHhCCE
Confidence 5555553211 1123456677788888999999887 77766544555666666532 23567777 566899
Q ss_pred EEcCCCCcCC------CCCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 292 NVTPGSACHC------IEPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 292 ~v~~g~~~~~------~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
.+++|..|.. ..++++|+|++. .|++|++++++.|++++++.
T Consensus 348 ~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 348 ALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDAVGAALELL 396 (398)
T ss_pred EEecCccchHHHHHHhCCCCEEEEEeeccCCHHHHHHHHHHHHHHHHHh
Confidence 9999887642 125799999986 69999999999999988764
No 111
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=100.00 E-value=2.7e-31 Score=233.87 Aligned_cols=279 Identities=13% Similarity=0.156 Sum_probs=208.9
Q ss_pred hhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEec---CCCCCChhhhhhhccCcEEEEEeCCCCCCcccc
Q 019899 4 FMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVP---SPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~---~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
-+.+.+++.++++++++++++|+++++..++.+++++||+|+++ .|+|.++...++ ..|.+++.+ .+
T Consensus 58 ~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vli~~~d~p~~~s~~~~~~-l~ga~~~~~---------~~ 127 (346)
T TIGR03576 58 KVQELGREHLGGPEEKILVFNRTSSAILATILALEPPGRKVVHYLPEKPAHPSIPRSCK-LAGAEYFES---------DE 127 (346)
T ss_pred HHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCCCCCEEEECCCCCCCchhHHHHHH-HcCCEEecc---------CC
Confidence 35556666677888999999999999999999999999999975 479999989888 888876432 13
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
+++++. . .++++|+++ +.+|+|.+++.+++++|+++|+++|++|++||+|+.+..+.....+...
T Consensus 128 l~~l~~-~-------~~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~~------ 192 (346)
T TIGR03576 128 LSELKK-I-------DGTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPALD------ 192 (346)
T ss_pred HHHHhh-C-------cCceEEEEE-CCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCCHHH------
Confidence 444321 1 256766664 5789999999999999999999999999999999986532111111111
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhccc--CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFC--SISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
.+..++++|+||+ ++|+|+||+++ ++++++.+.+....+ +.+++.+.++..+++... ...+++.++++
T Consensus 193 --~~~divv~s~SKa--laG~r~G~v~~-~~~li~~l~~~~~~~~~s~~~~~~~aa~~aL~~~~-----~~~~~~~l~~r 262 (346)
T TIGR03576 193 --LGADLVVTSTDKL--MDGPRGGLLAG-RKELVDKIKSVGEQFGLEAQAPLLAAVVRALEEFE-----LSRIRDAFKRK 262 (346)
T ss_pred --cCCcEEEeccchh--ccccceEEEEe-CHHHHHHHHHhhcCcccCccHHHHHHHHHHHhhcc-----HHHHHHHHHHH
Confidence 2234677899994 58899999998 889999998876654 467888888888875422 13456778888
Q ss_pred HHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcc-
Q 019899 239 YDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHE- 317 (334)
Q Consensus 239 ~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~- 317 (334)
++.+.+.+++ +.+..+.++ |+|++++.. ++.+++..+++++||.++|+..|. ..++|+||+++ +++
T Consensus 263 ~~~~~~~l~~--~~~~~~~~~-f~~~~~~~~-------~~~~~~~~ll~~~gV~v~~~~~f~-~~~~~vRis~~--~~~~ 329 (346)
T TIGR03576 263 EEVYLRLFDK--LNVERTPTG-FVIKGVEEE-------KLIEIGLDLLRNYGIITITAVGMP-GASKTLRFDLA--AKDA 329 (346)
T ss_pred HHHHHHHHHh--CCCCcCCCe-EEEEeCCCC-------CHHHHHHHHHHhCCEEEeCCcccC-CCCCeEEEEEe--cChH
Confidence 8888888874 454445555 688888742 234777888999999999998773 23679999999 344
Q ss_pred ---cHHHHHHHHHHHH
Q 019899 318 ---DIPLVIERIQKVA 330 (334)
Q Consensus 318 ---~l~~~l~~l~~~~ 330 (334)
+.+.+++.|++.+
T Consensus 330 ~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 330 ERIGDDYLVEAVKDSL 345 (346)
T ss_pred HhcCHHHHHHHHHhcc
Confidence 7999999988754
No 112
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=100.00 E-value=3.3e-31 Score=237.08 Aligned_cols=298 Identities=15% Similarity=0.197 Sum_probs=213.4
Q ss_pred hhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHH
Q 019899 6 SQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALD 85 (334)
Q Consensus 6 ~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~ 85 (334)
++.+++.+++ +.+.+++|+++++..++.+++++||+|+++.+.|.+....++ ..|++++.++...++++.+|+++++
T Consensus 57 ~e~lA~~~g~--~~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~~~~-~~g~~~~~~~~~~~~~~~~d~~~l~ 133 (370)
T TIGR02539 57 LEDLAEFLGM--DEARVTHGAREGKFAVMHALCKEGDWVVLDGLAHYTSYVAAE-RAGLNVKEVPHTGHPEYKVDPEGYG 133 (370)
T ss_pred HHHHHHHhCC--CceEEECChHHHHHHHHHHhhCCCCEEEECCcccHHHHHHHH-HcCCEEEEEecCCcccCCcCHHHHH
Confidence 4445555554 456779999999999999999999999999999887777777 8999999999754456789999999
Q ss_pred HHHHHHHHc-CCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCC
Q 019899 86 QAFNQARKR-GVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKD 164 (334)
Q Consensus 86 ~~l~~~~~~-~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (334)
+++++.... ..++++|++++|+||+|...+ +++|.++|+++|+++++|++|+.+.. ..+.. . .+
T Consensus 134 ~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~---l~~i~~la~~~~~~livDea~~~g~~----~~~~~---~-----~~ 198 (370)
T TIGR02539 134 EVIEEVEDESGKPPVLALLTHVDGEYGNLPD---AGKVAKVCREKGVPLLLNCAYTVGRM----PVSAK---E-----IG 198 (370)
T ss_pred HHHHHhhhccCCCcEEEEEECCCCCCccccC---HHHHHHHHHHcCCeEEEECccccCCc----CCCHH---H-----cC
Confidence 999753221 136789999999999999999 88999999999999999999986321 11111 1 34
Q ss_pred cEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChH----------HHHHHHHhhCChHHHHHHHHHHHHH
Q 019899 165 RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAP----------TQRLLISMLSDTKFIQEYLETNKRR 234 (334)
Q Consensus 165 ~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~~~~~~~~~~~~~~ 234 (334)
.+++++|+||+++ +|.|+||+++ ++++++.++....++..+.. .+.++...+.. ..+++.+..+.
T Consensus 199 ~di~v~s~sK~~~-~~g~~G~l~~-~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~---~~~~l~~~~~~ 273 (370)
T TIGR02539 199 ADFIVGSGHKSMA-ASGPCGVLGM-SEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPH---VVERVKRWDEE 273 (370)
T ss_pred CCEEEeeCccccc-CCCCEEEEEE-CHHHHhhhcccccCCccceeeeecccccccHHHHHHHHHHH---HHHHHHHHHHH
Confidence 5677899999998 6778999998 88898888776554332221 33333333321 13344444444
Q ss_pred HHHHHHHHHHHHHhCCCccc--CCCceeEEeeecCCcCC--CCChhhHHHHHHHHHHhcCeE-EcCCCCcCCCCCCeEEE
Q 019899 235 IKKLYDSFVAGLKQLGIRCS--ESSAGLYCWADMSGLIP--SYSEKGELELWDKLLNIAKIN-VTPGSACHCIEPGWFRC 309 (334)
Q Consensus 235 ~~~~~~~~~~~l~~~g~~~~--~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~gi~-v~~g~~~~~~~~~~iRi 309 (334)
+.. .+++.+.|+++|+++. .+..+.++++++|.... .........+.+. |.++||. ++++. ++++|+
T Consensus 274 ~~~-~~~l~~~L~~~g~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~-L~e~GI~~ir~~~------~~~iRi 345 (370)
T TIGR02539 274 VKK-TRWFVAELEDIGFIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEE-LKKRGIHGIRSGQ------TKYFKL 345 (370)
T ss_pred HHH-HHHHHHHHHhCCcEEEccCCCcCceEEEECCchhHHhhhhccccHHHHHH-HHhCCCccccCCc------ceEEEE
Confidence 444 5689999999998863 34556677788763210 0011123456666 5557997 55422 468999
Q ss_pred EecCCCcccHHHHHHHHHHHHHHcC
Q 019899 310 CFTSLTHEDIPLVIERIQKVAETCK 334 (334)
Q Consensus 310 ~~~~~~~~~l~~~l~~l~~~~~~~~ 334 (334)
++...++++++++++.|++++++++
T Consensus 346 s~~~~t~e~i~~l~~~L~~~~~~~~ 370 (370)
T TIGR02539 346 SVYGLTKEQVEYVVDSFEEIVEEYE 370 (370)
T ss_pred EecCCCHHHHHHHHHHHHHHHHhcC
Confidence 9744699999999999999988753
No 113
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=100.00 E-value=1.4e-30 Score=236.66 Aligned_cols=313 Identities=16% Similarity=0.168 Sum_probs=222.7
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCC------CCcc
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRST------DNFA 78 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~------~~~~ 78 (334)
+++.+++.++ .+++++|+|+++|+.+++.+++++|| |++++|.|..+...+. ..|.+++.+++.+. +++.
T Consensus 83 Lreaia~~~~--~~~vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~-~~G~~~v~v~~~~~~~~~~~~~f~ 158 (460)
T PRK13238 83 LEDAVKDIFG--YPYTIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIE-LNGATAVDLVIDEALDTGSRHPFK 158 (460)
T ss_pred HHHHHHHHhC--CCcEEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchHHHHH-HcCCEEEEEecccccccccccccc
Confidence 3444444443 46799999999999999999999999 9999999999988888 89999999998532 3444
Q ss_pred --ccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcc-cCCCHHHHHHHHHHHHhcCcEEEEeccccc--cccC-----CCC
Q 019899 79 --FSITALDQAFNQARKRGVKVRGILICNPANPVG-NIIPRETLYELLDFAREKNIHVISDEIYGG--SIFG-----NEE 148 (334)
Q Consensus 79 --~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG-~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~--~~~~-----~~~ 148 (334)
+|+++|++++++.. ..++++|++++|+|||| .+++.+++++|.++|++||++||+|+++.. ..|. +..
T Consensus 159 g~id~e~Le~~i~~~~--~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~ 236 (460)
T PRK13238 159 GNFDLEKLEALIEEVG--AENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYK 236 (460)
T ss_pred CCcCHHHHHHHHhhcC--CCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhcccccc
Confidence 99999999998521 02689999999999997 999999999999999999999999997632 2232 112
Q ss_pred cchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh----c--ccCC-ChHHHHHHHHhhCCh
Q 019899 149 FVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT----R--FCSI-SAPTQRLLISMLSDT 221 (334)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~----~--~~~~-~~~~~~~~~~~l~~~ 221 (334)
..++.++... +-...+.+..|..|... .+. .|+++++++++.+.++... . .++. +...|.+++..+.+.
T Consensus 237 ~~si~~i~~~--~~s~~D~~~~Sg~K~g~-~~~-GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~ 312 (460)
T PRK13238 237 DKSIKEIARE--MFSYADGLTMSAKKDAM-VNI-GGLLCFRDEDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEG 312 (460)
T ss_pred CCCHHHHhhh--hcccCcEEEEecccCCC-Ccc-eeEEEcChHHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHh
Confidence 2333322110 00112234445666543 222 3677775578888887652 1 2333 444477777666431
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCC--CChhhHHHHHHHHHHhcCeEEcCCCCc
Q 019899 222 KFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPS--YSEKGELELWDKLLNIAKINVTPGSAC 299 (334)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~gi~v~~g~~~ 299 (334)
.. +++...+ .++++++.+.|.+.|+++..|.+|+++++++...... .....+.+++.+|+++.||.+.|++.|
T Consensus 313 ~~-~~~~~~~----~~~~~~l~~~L~~~G~~~~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f 387 (460)
T PRK13238 313 MD-EDYLAYR----IGQVEYLGEGLEEAGVPIQTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSL 387 (460)
T ss_pred hC-hHHHHHH----HHHHHHHHHHHHHCCCCeEccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccce
Confidence 10 2222222 3357899999999999999999999999998754221 112234789999999999999998876
Q ss_pred CCCC-----------CCeEEEEecC--CCcccHHHHHHHHHHHHHH
Q 019899 300 HCIE-----------PGWFRCCFTS--LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 300 ~~~~-----------~~~iRi~~~~--~~~~~l~~~l~~l~~~~~~ 332 (334)
.... .+.+|++++. .+++.++.+.++|+++.++
T Consensus 388 ~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~ 433 (460)
T PRK13238 388 LLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKEN 433 (460)
T ss_pred ecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHHh
Confidence 5432 3689999993 3999999999999988754
No 114
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.98 E-value=5.3e-30 Score=228.89 Aligned_cols=293 Identities=19% Similarity=0.178 Sum_probs=212.2
Q ss_pred hhhhhhcCCCCCCCC-cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCC--hhhhhhhccCcEEEEEeCCCCCCcccc
Q 019899 4 FMSQVLGQAVSFDPS-QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPG--FDRDIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~-~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~--~~~~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
.+++.+++.++++++ .+++++|+++++..++.+++++||+|+++.++|++ +...++ ..|.+++.+|.+ .++.+|
T Consensus 36 ~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~-~~g~~~~~v~~~--~~~~~~ 112 (356)
T cd06451 36 EILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVFGDRWADMAE-RYGADVDVVEKP--WGEAVS 112 (356)
T ss_pred HHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEecCCchhHHHHHHHH-HhCCCeEEeecC--CCCCCC
Confidence 344555555666544 57888889999999999999999999999988776 345566 789999999974 346899
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++.+++. +++++++++|+||+|.+.| +++|.++|+++|+++++|++|+. |....++. .
T Consensus 113 ~~~l~~~i~~~-----~~~~v~i~~~~~~~G~~~~---~~~i~~~a~~~~~~li~D~~~~~----g~~~~~~~---~--- 174 (356)
T cd06451 113 PEEIAEALEQH-----DIKAVTLTHNETSTGVLNP---LEGIGALAKKHDALLIVDAVSSL----GGEPFRMD---E--- 174 (356)
T ss_pred HHHHHHHHhcc-----CCCEEEEeccCCCcccccC---HHHHHHHHHhcCCEEEEeeehhc----cCcccccc---c---
Confidence 99999999752 7899999999999999999 88899999999999999999864 21111221 1
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHH----hhc----------------c-cCCChHHHHHHHHhhC
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKK----LTR----------------F-CSISAPTQRLLISMLS 219 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~----~~~----------------~-~~~~~~~~~~~~~~l~ 219 (334)
.+.++++.|++|+++.+ .++||++. ++++++.+.. ... . .+.+...+.++..+++
T Consensus 175 --~~~d~~~~s~~K~l~~p-~g~G~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~ 250 (356)
T cd06451 175 --WGVDVAYTGSQKALGAP-PGLGPIAF-SERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALD 250 (356)
T ss_pred --cCccEEEecCchhccCC-CCcceeEE-CHHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHH
Confidence 34456677899999743 46899998 6777776653 000 0 1223333445545543
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC---ceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCC
Q 019899 220 DTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESS---AGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPG 296 (334)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g 296 (334)
.. ....+.+..++..++++++.+.|++.|+++..+. .+.++|+.++... +..++++.|.+++||.+.+|
T Consensus 251 ~l--~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~L~~~~gI~~~~g 322 (356)
T cd06451 251 LI--LEEGLENRWARHRRLAKALREGLEALGLKLLAKPELRSPTVTAVLVPEGV------DGDEVVRRLMKRYNIEIAGG 322 (356)
T ss_pred HH--HHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCCceEEEECCCCC------CHHHHHHHHHHhCCEEEecc
Confidence 21 1233466777888899999999998888775432 3455667776432 34678888655449999988
Q ss_pred CCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHH
Q 019899 297 SACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAE 331 (334)
Q Consensus 297 ~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~ 331 (334)
..+. .++++|++++. .+++|++++++.|+++++
T Consensus 323 ~~~~--~~~~iRis~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 323 LGPT--AGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred cccc--cCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 7532 35699999985 589999999999998764
No 115
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=1.5e-29 Score=205.38 Aligned_cols=304 Identities=20% Similarity=0.315 Sum_probs=225.3
Q ss_pred ChhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcC---CC--CeEEec-CCCCCChhhhhhhccCcEEEEEe----
Q 019899 1 MAGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLAD---HG--NALLVP-SPYYPGFDRDIRFRTGVELIPVH---- 70 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~---~g--d~vl~~-~p~~~~~~~~~~~~~g~~v~~v~---- 70 (334)
+++.++++++ |...+.+|.+|+|++.+.+.++-.+.. .| .+|++| .|.|-+|.++.. .-.. .+.+.
T Consensus 83 la~~l~~~yg--wnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l-~~d~-fVs~kP~ie 158 (417)
T COG3977 83 LAKMLRREYG--WNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGL-EEDL-FVSAKPNIE 158 (417)
T ss_pred HHHHHHHHhC--CCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhcccccccc-Cccc-eeeccCCcc
Confidence 4678899998 888999999999999999988877742 23 367777 799999987644 2111 11111
Q ss_pred CCCC--CCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCC
Q 019899 71 CRST--DNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEE 148 (334)
Q Consensus 71 ~~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~ 148 (334)
..+. -.+++|.+.+.-- ..+.+|+++-|.||||.+++.+|+.++-.++++||+++++|.+|+. -|++-.
T Consensus 159 l~~~g~FKY~vDF~~l~i~--------e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~-PFP~ii 229 (417)
T COG3977 159 LLPAGQFKYHVDFEHLHIG--------ESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGV-PFPGII 229 (417)
T ss_pred cccccceeeccCHHHcccc--------cccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCC-CCCcee
Confidence 1112 2245676666531 3788999999999999999999999999999999999999999974 122222
Q ss_pred cchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhccc--CCChHHHHHHHHhhCChHHHHH
Q 019899 149 FVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFC--SISAPTQRLLISMLSDTKFIQE 226 (334)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~ 226 (334)
+..+..+. ..+++.|.|+|| +|+||.|+|.+++ ++++++.+..++... .++...++.++.+++.++...-
T Consensus 230 fsd~~~~w------~~NiilC~SLSK-~GLPG~R~GIiIa-ne~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rl 301 (417)
T COG3977 230 FSDATPLW------NENIILCMSLSK-LGLPGSRCGIIIA-NEKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRL 301 (417)
T ss_pred cccccccC------CCCEEEEeehhh-cCCCCcceeEEEc-cHHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHH
Confidence 33333333 578899999999 7899999999999 999999999887664 4566788888999988764221
Q ss_pred HH----HHHHHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC
Q 019899 227 YL----ETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI 302 (334)
Q Consensus 227 ~~----~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~ 302 (334)
.- .-.+++.+...+.++..|.+..+.+-.|++..|+|+=+..... ...++.++ |+..|+.+.||++|-+.
T Consensus 302 seqVIrPFY~~~~q~~~~~l~~~lp~~~~~iHkpEGAIFlWLWf~dLPI-----tt~~LYq~-LKa~Gvl~VPG~~FFpG 375 (417)
T COG3977 302 SEQVIRPFYRNRVQTTIAILRRYLPEYRCLIHKPEGAIFLWLWFKDLPI-----TTEELYQR-LKARGVLMVPGHYFFPG 375 (417)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHhcCccceeeecCCcceeehhhhccCCC-----CHHHHHHH-HHhCeEEEecccccCCC
Confidence 11 2234444444555555555556777899999999876655322 23688899 66689999999998553
Q ss_pred C-------CCeEEEEecCCCcccHHHHHHHHHHHHHH
Q 019899 303 E-------PGWFRCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 303 ~-------~~~iRi~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
- ..++|+++. -+++.++..+.+|.+.+++
T Consensus 376 l~~ewpH~hqC~Rmn~~-~~~~~ie~Gva~lae~ve~ 411 (417)
T COG3977 376 LDKEWPHTHQCMRMNYV-PEPEKIEKGVAILAEEVER 411 (417)
T ss_pred CCCCCCCccceEEEecC-CCHHHHHHHHHHHHHHHHH
Confidence 2 357999987 7889999999999998876
No 116
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.97 E-value=3.7e-29 Score=223.55 Aligned_cols=297 Identities=14% Similarity=0.154 Sum_probs=207.4
Q ss_pred hhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHH
Q 019899 4 FMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITA 83 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~ 83 (334)
-+++.+++.+++ +++++++|+++++..++.+++++||+|+++.++|.+....++ ..|.+++.++.+.+.++.+|+++
T Consensus 48 ~l~~~la~~~g~--~~i~~~~g~t~al~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~~~ 124 (361)
T cd06452 48 DFHHDLAEFLGM--DEARVTPGAREGKFAVMHSLCEKGDWVVVDGLAHYTSYVAAE-RAGLNVREVPNTGHPEYHITPEG 124 (361)
T ss_pred HHHHHHHHHcCC--ceEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCcchHHHHHHH-hcCCEEEEEecCCCCCcccCHHH
Confidence 345556666665 789999999999999999999999999999999988877777 89999999998544456899999
Q ss_pred HHHHHHHHHHc-CCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccC
Q 019899 84 LDQAFNQARKR-GVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVD 162 (334)
Q Consensus 84 l~~~l~~~~~~-~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (334)
+++++++..+. +.+++++++++|+||||...+ +++|.++|+++|+++|+|++|+.... ..+...
T Consensus 125 l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~g~~----~~~~~~-------- 189 (361)
T cd06452 125 YAEVIEEVKDEFGKPPALALLTHVDGNYGNLHD---AKKIAKVCHEYGVPLLLNGAYTVGRM----PVSGKE-------- 189 (361)
T ss_pred HHHHHHHHhhccCCCceEEEEECCCCCCeeecc---HHHHHHHHHHcCCeEEEECCcccCCc----CCCHHH--------
Confidence 99999753221 236889999999999999988 89999999999999999999974221 112211
Q ss_pred CCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCCh----------HHHHHHHHhhCChHHHHHHHHHHH
Q 019899 163 KDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISA----------PTQRLLISMLSDTKFIQEYLETNK 232 (334)
Q Consensus 163 ~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~~~~~~~~~~~ 232 (334)
.+.++++.|+||+++ ++.|+||+++ ++++.+.+.+...+++.+. ....++...+. ...+++.+..
T Consensus 190 ~~~d~~~~s~~K~l~-~~~~~G~l~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~---~~~~~~~~~~ 264 (361)
T cd06452 190 LGADFIVGSGHKSMA-ASAPIGVLAT-TEEWADIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFP---HVKERVKRWD 264 (361)
T ss_pred cCCCEEEecCCcccc-CCCCeEEEEE-CHHHHHHHhccccccccceeeeeccccCchHHHHHHHHHH---HHHHHHHHHH
Confidence 456789999999998 5569999998 7888888866544332211 11222222221 1223333333
Q ss_pred HHHHHHHHHHHHHHHhC-CCcccC--CCceeEEeeecCCcCCC--CChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeE
Q 019899 233 RRIKKLYDSFVAGLKQL-GIRCSE--SSAGLYCWADMSGLIPS--YSEKGELELWDKLLNIAKINVTPGSACHCIEPGWF 307 (334)
Q Consensus 233 ~~~~~~~~~~~~~l~~~-g~~~~~--~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~i 307 (334)
+..++++++.+.|+++ |+++.. +....++.++.+..... .....+.++.+.|++ +||.+.. ...+.++
T Consensus 265 -~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~-~gI~~~~-----~~~~~~~ 337 (361)
T cd06452 265 -EEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFDEIAKKHKRRGYFLYSELKK-RGIHGIK-----PGLTRYF 337 (361)
T ss_pred -HHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcchhhhhccccchhHHHHHHH-cCceEEc-----CCCceEE
Confidence 3344568899999998 888752 22233444565521110 001123468888554 7998532 1124589
Q ss_pred EEEecCCCcccHHHHHHHHHHHH
Q 019899 308 RCCFTSLTHEDIPLVIERIQKVA 330 (334)
Q Consensus 308 Ri~~~~~~~~~l~~~l~~l~~~~ 330 (334)
|++....++++++.+++.|+++.
T Consensus 338 ri~~~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 338 KLSTYGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred EEEecCCCHHHHHHHHHHHHHHh
Confidence 99984369999999999998765
No 117
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.97 E-value=1.9e-29 Score=228.90 Aligned_cols=291 Identities=19% Similarity=0.247 Sum_probs=211.6
Q ss_pred hhhhhhcCCCCCC-CCcEEEecCcHHHHHHHHHHh----cCCCCeEEecCCCCCChhh----hhhhccCcEEEEEeCCCC
Q 019899 4 FMSQVLGQAVSFD-PSQIVLTAGATPAVEILCFCL----ADHGNALLVPSPYYPGFDR----DIRFRTGVELIPVHCRST 74 (334)
Q Consensus 4 ~~~~~~~~~~~~~-~~~i~~~~g~~~~~~~~~~~l----~~~gd~vl~~~p~~~~~~~----~~~~~~g~~v~~v~~~~~ 74 (334)
.+++.+++.++++ +++|++++|+++++++++.++ .++||+|+++++.|++... ..+ ..|.+++.++++
T Consensus 66 ~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~-~~g~~~~~v~~~-- 142 (403)
T TIGR01979 66 AVREKVAKFINAASDEEIVFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAE-RTGATLKFIPLD-- 142 (403)
T ss_pred HHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHH-hcCcEEEEEecC--
Confidence 3445566667777 679999999999999998875 5789999999999887543 334 579999999974
Q ss_pred CCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhh
Q 019899 75 DNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAE 154 (334)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~ 154 (334)
.++.+|++++++++++ +++++++++|+||||.++| +++|.++|+++|+++++|++|+... ...++..
T Consensus 143 ~~~~~~~~~l~~~i~~------~~~lv~~~~~~~~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~g~----~~~~~~~ 209 (403)
T TIGR01979 143 DDGTLDLDDLEKLLTE------KTKLVAITHVSNVLGTVNP---VEEIAKLAHQVGAKVLVDGAQAVPH----MPVDVQA 209 (403)
T ss_pred CCCCCCHHHHHHHhcc------CCeEEEEEcccccccccCC---HHHHHHHHHHcCCEEEEEchhhcCc----cccCccc
Confidence 4457899999999976 7999999999999999999 8899999999999999999987522 1122211
Q ss_pred hhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc-----------------------ccCCChHHH
Q 019899 155 ILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR-----------------------FCSISAPTQ 211 (334)
Q Consensus 155 ~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~ 211 (334)
.+.++++.|++|.+|++| +|++++ ++++.+.+..... .++.+....
T Consensus 210 --------~~~d~~~~s~~K~~gp~G--~g~l~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~ 278 (403)
T TIGR01979 210 --------LDCDFYVFSGHKMYGPTG--IGVLYG-KEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGV 278 (403)
T ss_pred --------cCCCEEEEecccccCCCC--ceEEEE-chHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHH
Confidence 456788899999888666 889988 6666665431100 012333444
Q ss_pred HHHHHhhCChHHHHH-HHHHHHHHHHHHHHHHHHHHHhC-CCcccCCC-----ceeEEeeecCCcCCCCChhhHHHHHHH
Q 019899 212 RLLISMLSDTKFIQE-YLETNKRRIKKLYDSFVAGLKQL-GIRCSESS-----AGLYCWADMSGLIPSYSEKGELELWDK 284 (334)
Q Consensus 212 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (334)
.++..+++. +.+ ..++..++..+.++++.+.|+++ ++++..+. ++++. +.++.. +..++.+.
T Consensus 279 ~al~~al~~---~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~-~~~~~~-------~~~~~~~~ 347 (403)
T TIGR01979 279 IGLGAAIDY---LEAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAEDRGGIIS-FNVEGV-------HPHDVGTI 347 (403)
T ss_pred HHHHHHHHH---HHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccccCceEE-EEeCCc-------CHHHHHHH
Confidence 555554432 122 24566778888889999999887 78776543 34443 556542 23466655
Q ss_pred HHHhcCeEEcCCCCcCC------CCCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 285 LLNIAKINVTPGSACHC------IEPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 285 ll~~~gi~v~~g~~~~~------~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
++++||.+.+|..|.. ..++++|+|++. .+++|++++++.|+++++.+
T Consensus 348 -L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 348 -LDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred -HhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence 6779999998764321 125789999995 58999999999999988764
No 118
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.97 E-value=2.5e-29 Score=228.09 Aligned_cols=290 Identities=16% Similarity=0.189 Sum_probs=211.4
Q ss_pred hhhhhhcCCCCC-CCCcEEEecCcHHHHHHHHHH----hcCCCCeEEecCCCCCChh----hhhhhccCcEEEEEeCCCC
Q 019899 4 FMSQVLGQAVSF-DPSQIVLTAGATPAVEILCFC----LADHGNALLVPSPYYPGFD----RDIRFRTGVELIPVHCRST 74 (334)
Q Consensus 4 ~~~~~~~~~~~~-~~~~i~~~~g~~~~~~~~~~~----l~~~gd~vl~~~p~~~~~~----~~~~~~~g~~v~~v~~~~~ 74 (334)
.+++.+++.++. ++++|++|+|+|++++.++.+ ++++||+|+++++.|++.. ..++ ..|.+++.++++
T Consensus 71 ~~r~~la~~~~~~~~~~v~~t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~-~~g~~v~~v~~~-- 147 (406)
T PRK09295 71 NVRKQAALFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCA-RVGAELRVIPLN-- 147 (406)
T ss_pred HHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHH-HcCcEEEEEecC--
Confidence 345566666776 578999999999999999886 4578999999999987643 3334 579999999984
Q ss_pred CCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhh
Q 019899 75 DNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAE 154 (334)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~ 154 (334)
.++.+|++++++++++ +++++++++|+||||.++| +++|.++|+++|+++++|++|+... ...++..
T Consensus 148 ~~~~~d~~~l~~~i~~------~t~lv~l~~~~n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~g~----~~~~~~~ 214 (406)
T PRK09295 148 PDGTLQLETLPALFDE------RTRLLAITHVSNVLGTENP---LAEMIALAHQHGAKVLVDGAQAVMH----HPVDVQA 214 (406)
T ss_pred CCCCCCHHHHHHhcCC------CcEEEEEecchhcccccCC---HHHHHHHHHHcCCEEEEEcccccCc----cccCchh
Confidence 3456899999999875 7899999999999999999 8889999999999999999987532 2222221
Q ss_pred hhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh------------------------cccCCChHH
Q 019899 155 ILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT------------------------RFCSISAPT 210 (334)
Q Consensus 155 ~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~------------------------~~~~~~~~~ 210 (334)
.+.++++.|++|.+|++| +|+++. ++++++.+.... ..++.+...
T Consensus 215 --------~~~D~~~~s~~K~~gp~G--~G~l~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~ 283 (406)
T PRK09295 215 --------LDCDFYVFSGHKLYGPTG--IGILYV-KEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGG 283 (406)
T ss_pred --------cCCCEEEeehhhccCCCC--cEEEEE-chHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHH
Confidence 456788899999888666 799998 666655442110 112345555
Q ss_pred HHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCC--ceeEEeeecCCcCCCCChhhHHHHHHHHHH
Q 019899 211 QRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSESS--AGLYCWADMSGLIPSYSEKGELELWDKLLN 287 (334)
Q Consensus 211 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 287 (334)
..++..+++... +..+++..++.++..+++.+.|.+. ++++..+. .+++ .+.+++. +..++... |+
T Consensus 284 ~~~l~~al~~~~--~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~iv-~~~~~~~-------~~~~~~~~-L~ 352 (406)
T PRK09295 284 IIGLGAALDYVS--ALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVI-AFNLGKH-------HAYDVGSF-LD 352 (406)
T ss_pred HHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCceEE-EEEECCc-------CHHHHHHH-HH
Confidence 555665553321 1124566677888889999999877 67766543 4443 3455542 23466665 67
Q ss_pred hcCeEEcCCCCcCCC------CCCeEEEEecC-CCcccHHHHHHHHHHHHH
Q 019899 288 IAKINVTPGSACHCI------EPGWFRCCFTS-LTHEDIPLVIERIQKVAE 331 (334)
Q Consensus 288 ~~gi~v~~g~~~~~~------~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~ 331 (334)
++||.+++|..|... .++++|+|++. .|++|++++++.|+++..
T Consensus 353 ~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 353 NYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred hCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 799999998866421 24689999996 588999999999998754
No 119
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.97 E-value=4.7e-29 Score=225.70 Aligned_cols=296 Identities=17% Similarity=0.137 Sum_probs=210.6
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITAL 84 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l 84 (334)
+++.++..++. +++++++|+++|+..++.+++++||.|++++|.|+++...++ ..+.+.+.++ .+|++++
T Consensus 88 le~~ia~~~g~--~~~ii~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~-~~~~~~~~~~-------~~d~~~l 157 (393)
T TIGR01822 88 LEAKIAAFLGT--EDTILYASCFDANGGLFETLLGAEDAIISDALNHASIIDGVR-LCKAKRYRYA-------NNDMADL 157 (393)
T ss_pred HHHHHHHHhCC--CcEEEECchHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHH-hcCCceEEeC-------CCCHHHH
Confidence 44455555543 578888999999999999999999999999999999998887 7777665543 3789999
Q ss_pred HHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCC
Q 019899 85 DQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKD 164 (334)
Q Consensus 85 ~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (334)
++++++....+.++++|++.+++||||.+.+ +++|.++|++||+++|+|++|+...++.. ..+..+.. +...+
T Consensus 158 ~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~---l~~i~~la~~~~~~li~De~~~~g~~~~~-~~~~~~~~---~~~~~ 230 (393)
T TIGR01822 158 EAQLKEARAAGARHRLIATDGVFSMDGVIAP---LDEICDLADKYDALVMVDECHATGFLGPT-GRGSHELC---GVMGR 230 (393)
T ss_pred HHHHHhhhhcCCCceEEEEeCCccCCCCcCC---HHHHHHHHHHcCCEEEEECCccccCcCCC-CCchHHhc---CCCCC
Confidence 9999865333346788888888999999999 99999999999999999999965433221 11111111 11235
Q ss_pred cEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc--cC--CChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 019899 165 RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--CS--ISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYD 240 (334)
Q Consensus 165 ~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (334)
.+++++|+||+++ |.|+||+++ ++++.+.++..... ++ .++..+.++..+++ .++ ..++.+++++++++
T Consensus 231 ~di~~~s~sK~l~--g~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~---~~~-~~~~~~~~~~~~~~ 303 (393)
T TIGR01822 231 VDIITGTLGKALG--GASGGFTTA-RKEVVELLRQRSRPYLFSNSLPPAVVGASIKVLE---MLE-ASNELRDRLWANTR 303 (393)
T ss_pred CeEEEEEChHHhh--CCCcEEEEe-CHHHHHHHHHhCccceecCCCCHHHHHHHHHHHH---HHh-cCHHHHHHHHHHHH
Confidence 6788999999874 578999998 78888888764322 22 23333334444432 111 23567788999999
Q ss_pred HHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCC--CCCCeEEEEecC-CCcc
Q 019899 241 SFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHC--IEPGWFRCCFTS-LTHE 317 (334)
Q Consensus 241 ~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~~iRi~~~~-~~~~ 317 (334)
++.+.|++.|+++..+.++ ++.+.++.. .++.++...|++ +||.+. +..|.. ....++|++++. .+++
T Consensus 304 ~l~~~L~~~g~~~~~~~~~-~~~i~~~~~------~~~~~l~~~L~~-~gI~v~-~~~~~~~~~~~~~iRis~~~~~t~e 374 (393)
T TIGR01822 304 YFRERMEAAGFDIKPADHP-IIPVMLYDA------VLAQRFARRLLE-EGIYVT-GFFYPVVPKGQARIRVQISAAHTEE 374 (393)
T ss_pred HHHHHHHHcCCCCCCCCCC-EEEEEeCCH------HHHHHHHHHHHH-CCeeEe-eeCCCCCCCCCceEEEEECCCCCHH
Confidence 9999998888876654444 333444431 234678888665 699987 444432 123579999885 5899
Q ss_pred cHHHHHHHHHHHHHHc
Q 019899 318 DIPLVIERIQKVAETC 333 (334)
Q Consensus 318 ~l~~~l~~l~~~~~~~ 333 (334)
|+++++++|+++.++.
T Consensus 375 di~~~~~~l~~~~~~~ 390 (393)
T TIGR01822 375 QLDRAVEAFTRIGREL 390 (393)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998754
No 120
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.97 E-value=1.9e-29 Score=230.06 Aligned_cols=294 Identities=14% Similarity=0.169 Sum_probs=212.4
Q ss_pred hhhhhhcCCCCCC-CCcEEEecCcHHHHHHHHHHh----cCCCCeEEecCCCCCChhh----hhhhccCcEEEEEeCCCC
Q 019899 4 FMSQVLGQAVSFD-PSQIVLTAGATPAVEILCFCL----ADHGNALLVPSPYYPGFDR----DIRFRTGVELIPVHCRST 74 (334)
Q Consensus 4 ~~~~~~~~~~~~~-~~~i~~~~g~~~~~~~~~~~l----~~~gd~vl~~~p~~~~~~~----~~~~~~g~~v~~v~~~~~ 74 (334)
.+++.+++.++++ +++|++|+|+|++++.++..+ +++||+|+++.+.|++... ..+ ..|.+++.+++..
T Consensus 80 ~~r~~la~~~~~~~~~~v~~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~-~~g~~v~~v~~~~- 157 (424)
T PLN02855 80 LARKKVAAFINASTSREIVFTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQ-KTGAVLKFVGLTP- 157 (424)
T ss_pred HHHHHHHHHcCCCCCCEEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHH-HcCCEEEEEecCC-
Confidence 4456667777775 579999999999999998763 5789999999999886443 334 5799999999843
Q ss_pred CCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhh
Q 019899 75 DNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAE 154 (334)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~ 154 (334)
+..+|++++++++++ ++++|++++++||||.++| +++|.++|+++|+++++|++|+. +....++.
T Consensus 158 -~~~~~~~~l~~~i~~------~t~lv~i~~~~n~tG~~~~---~~~I~~l~~~~g~~vivD~a~~~----g~~~~~~~- 222 (424)
T PLN02855 158 -DEVLDVEQLKELLSE------KTKLVATHHVSNVLGSILP---VEDIVHWAHAVGAKVLVDACQSV----PHMPVDVQ- 222 (424)
T ss_pred -CCCcCHHHHHHHhcc------CceEEEEeCccccccccCC---HHHHHHHHHHcCCEEEEEhhhhc----CCcCCCch-
Confidence 345899999999976 7899999999999999999 88999999999999999999864 22222222
Q ss_pred hhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh-----------------------cccCCChHHH
Q 019899 155 ILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT-----------------------RFCSISAPTQ 211 (334)
Q Consensus 155 ~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~ 211 (334)
. .+.++++.|++|.+|++| +|+++. ++++++.+.... ..++.+....
T Consensus 223 --~-----~~~d~~~~s~~K~~gp~G--~G~l~~-~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~ 292 (424)
T PLN02855 223 --T-----LGADFLVASSHKMCGPTG--IGFLWG-KSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEA 292 (424)
T ss_pred --h-----cCCCEEEeecccccCCCc--cEEEEE-chhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHH
Confidence 1 455678999999777555 899998 667666553220 0112333444
Q ss_pred HHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCc------eeEEeeecCCcCCCCChhhHHHHHHH
Q 019899 212 RLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSESSA------GLYCWADMSGLIPSYSEKGELELWDK 284 (334)
Q Consensus 212 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~------g~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (334)
.++..+++... +..+++.+++..+..+++.+.|+++ ++++..+.. +.++.+.++.. +..++.+.
T Consensus 293 ~~l~~al~~~~--~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~-------~~~~v~~~ 363 (424)
T PLN02855 293 IGLGAAIDYLS--EIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEGI-------HPTDLSTF 363 (424)
T ss_pred HHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEECCc-------CHHHHHHH
Confidence 44554443211 2245677788888889999999877 777664321 23444666642 23567777
Q ss_pred HHHhcCeEEcCCCCcCC------CCCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 285 LLNIAKINVTPGSACHC------IEPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 285 ll~~~gi~v~~g~~~~~------~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
|.+++||.+..|..|.. ..++++|+|++. .|++|++++++.|+++++++
T Consensus 364 L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~~~ 419 (424)
T PLN02855 364 LDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKDTIAFF 419 (424)
T ss_pred hcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHHHHHH
Confidence 55545999998886532 124689999986 59999999999999998764
No 121
>PLN02822 serine palmitoyltransferase
Probab=99.97 E-value=1.1e-28 Score=226.30 Aligned_cols=302 Identities=14% Similarity=0.175 Sum_probs=219.8
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITAL 84 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l 84 (334)
+++.+++.++ .++.|++++|.+ ++..++.+++++||.|+++...|+++...+. ..|.+++.++.+ |++.+
T Consensus 159 Lee~La~~~~-~~~~i~~s~G~~-a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~-ls~~~~~~~~~n-------d~~~l 228 (481)
T PLN02822 159 CETKIAKFLG-TPDSILYSYGLS-TIFSVIPAFCKKGDIIVADEGVHWGIQNGLY-LSRSTIVYFKHN-------DMESL 228 (481)
T ss_pred HHHHHHHHhC-CCCEEEECCHHH-HHHHHHHHhCCCCCEEEEeCCccHHHHHHHH-HcCCeEEEECCC-------CHHHH
Confidence 3444444444 346788887766 6788999999999999999888888878887 788899988842 45666
Q ss_pred HHHHHHHHHc---CCce-eEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccC--CCCcchhhhhhhc
Q 019899 85 DQAFNQARKR---GVKV-RGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFG--NEEFVSMAEILEA 158 (334)
Q Consensus 85 ~~~l~~~~~~---~~~~-~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~--~~~~~~~~~~~~~ 158 (334)
+..+++.... .+++ ++|++..+++++|.+.| +++|.++|++||+++|+||+|+.+.++ |.+......+..
T Consensus 229 ~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~- 304 (481)
T PLN02822 229 RNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPI- 304 (481)
T ss_pred HHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCC-
Confidence 6666544322 1234 67777777899999999 899999999999999999999977775 333223222211
Q ss_pred cccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCC--hHHHHHHHHhhCChHHHHHHHHHHHHH
Q 019899 159 EEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSIS--APTQRLLISMLSDTKFIQEYLETNKRR 234 (334)
Q Consensus 159 ~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~ 234 (334)
...+++++||||++|++| ||+++ ++++++.++.... .++.+ +..+.++..+++. ++.. .+.+++
T Consensus 305 ----~~~dii~~s~sKalg~~G---G~i~g-~~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~---l~~~-~~~~~~ 372 (481)
T PLN02822 305 ----EKIDIITAAMGHALATEG---GFCTG-SARVVDHQRLSSSGYVFSASLPPYLASAAITAIDV---LEDN-PSVLAK 372 (481)
T ss_pred ----CCCeEEEecchhhhhhCC---eEEEc-CHHHHHHHHhcCCceeeccccCHHHHHHHHHHHHH---HHhC-HHHHHH
Confidence 355688899999999888 99998 8888888875432 34444 4555666566532 2222 467788
Q ss_pred HHHHHHHHHHHHHhC-CCcccCCCceeEEeeecCCcCCC--CChhhHHHHHHHHHHhcCeEEcCCCC--cCCC-CCCeEE
Q 019899 235 IKKLYDSFVAGLKQL-GIRCSESSAGLYCWADMSGLIPS--YSEKGELELWDKLLNIAKINVTPGSA--CHCI-EPGWFR 308 (334)
Q Consensus 235 ~~~~~~~~~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~gi~v~~g~~--~~~~-~~~~iR 308 (334)
++++.+++.+.|++. |+.+..+.+++++++.+++.... .......+++++|++++||.+.|+.+ ++.. .+.++|
T Consensus 373 l~~~~~~l~~~L~~~~g~~~~~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lR 452 (481)
T PLN02822 373 LKENIALLHKGLSDIPGLSIGSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIR 452 (481)
T ss_pred HHHHHHHHHHHHHhcCCcccCCCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEE
Confidence 999999999999986 88887777888888888653111 11122467899988779999997643 3211 135799
Q ss_pred EEecC-CCcccHHHHHHHHHHHHHH
Q 019899 309 CCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 309 i~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
++++. .+++||++++++|++++.+
T Consensus 453 i~is~~~t~edI~~~~~~l~~~~~~ 477 (481)
T PLN02822 453 LFVSAGHTESDILKASESLKRVAAS 477 (481)
T ss_pred EEECCCCCHHHHHHHHHHHHHHHHH
Confidence 99875 6999999999999998875
No 122
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.97 E-value=1.5e-28 Score=219.93 Aligned_cols=292 Identities=16% Similarity=0.148 Sum_probs=214.5
Q ss_pred hhhhhcCCCCCCCC--cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCCh--hhhhhhccCcEEEEEeCCCCCCcccc
Q 019899 5 MSQVLGQAVSFDPS--QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGF--DRDIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 5 ~~~~~~~~~~~~~~--~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~--~~~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
+++.+++.++++++ .|++|+|+|++++.++.++..+||.+++..+.+++. ...++ ..|.+++.++++ .+..+|
T Consensus 40 ~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~-~~g~~~~~v~~~--~~~~~d 116 (363)
T TIGR02326 40 IRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGARIVQIAE-YLGIPHHVVDTG--EVEPPD 116 (363)
T ss_pred HHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHHHHHHHH-HcCCceEEEeCC--CCCCCC
Confidence 45556666777654 699999999999999999988888877766655544 34456 789999999973 456789
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++. .+++++.+++++||||.++| +++|.++|+++|+++++|++++. |....++..
T Consensus 117 ~~~l~~~l~~~----~~~~~v~~~~~~~~tG~~~~---i~~I~~l~~~~g~~livD~~~~~----g~~~~~~~~------ 179 (363)
T TIGR02326 117 VVEVEAILAAD----PAITHIALVHCETTTGILNP---IEAVAKLAHRHGKVTIVDAMSSF----GGIPIDIAE------ 179 (363)
T ss_pred HHHHHHHHhhC----CCccEEEEEeecCCccccCc---HHHHHHHHHHcCCEEEEEccccc----cCcccchhh------
Confidence 99999998752 24677889999999999999 89999999999999999998763 222223322
Q ss_pred cCCCcEEEEecccccC-CCCCceEEEEeecCHHHHHHHHHh--------------------hcccCCChHHHHHHHHhhC
Q 019899 161 VDKDRVHIIYGLSKDL-SLPGFRTGVIYSYNESVLAAAKKL--------------------TRFCSISAPTQRLLISMLS 219 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~-~~~g~r~g~i~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~l~ 219 (334)
.+.+++++|++|++ |++| +|++++ +++..+.+... ...++.+.+.+.++.++++
T Consensus 180 --~~~D~~~~s~~K~l~~p~G--~G~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~ 254 (363)
T TIGR02326 180 --LHIDYLISSANKCIQGVPG--FGFVIA-RQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALL 254 (363)
T ss_pred --cCccEEEecCccccccCCc--ceEEEE-CHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHH
Confidence 45568889999988 4445 799998 66666654311 0124566677777766664
Q ss_pred ChHHHHH-HHHHHHHHHHHHHHHHHHHHHhCCCcccCC---CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcC
Q 019899 220 DTKFIQE-YLETNKRRIKKLYDSFVAGLKQLGIRCSES---SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTP 295 (334)
Q Consensus 220 ~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~ 295 (334)
... ++ .+++..++++++++++.+.|+++|++...+ ..+...++.+|.... .+..++.+. ++++||.+.|
T Consensus 255 ~l~--~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~-L~~~gi~v~~ 327 (363)
T TIGR02326 255 ELE--KEGGVAARHQRYQQNQKTLVAGMRALGFEPLLDDEIQSPIITSFYSPEDPD----YRFADFYQR-LKEQGFVIYP 327 (363)
T ss_pred HHH--HhhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCceEEEEECCCCCC----CCHHHHHHH-HHHCCEEEEC
Confidence 421 22 246678899999999999999988876543 345567778775311 123466777 5668999999
Q ss_pred CCCcCCCCCCeEEEEe-cCCCcccHHHHHHHHHHHHH
Q 019899 296 GSACHCIEPGWFRCCF-TSLTHEDIPLVIERIQKVAE 331 (334)
Q Consensus 296 g~~~~~~~~~~iRi~~-~~~~~~~l~~~l~~l~~~~~ 331 (334)
|..+. .+++|+++ +..+.++++.+++.|++++.
T Consensus 328 g~~~~---~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 328 GKVSQ---VDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred CcCCC---CCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 87652 47899996 44699999999999998763
No 123
>PRK02948 cysteine desulfurase; Provisional
Probab=99.97 E-value=7.7e-30 Score=229.73 Aligned_cols=292 Identities=14% Similarity=0.183 Sum_probs=213.8
Q ss_pred hhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc----CCCCeEEecCCCCCChhhh---hhhccCcEEEEEeCCCCC
Q 019899 3 GFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLA----DHGNALLVPSPYYPGFDRD---IRFRTGVELIPVHCRSTD 75 (334)
Q Consensus 3 ~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~----~~gd~vl~~~p~~~~~~~~---~~~~~g~~v~~v~~~~~~ 75 (334)
+.+++.+++.+++++++|++++|+++++..++.++. ++||+|+++...|+++... ++ ..|.+++.++++ .
T Consensus 46 ~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~-~~g~~v~~v~~~--~ 122 (381)
T PRK02948 46 QVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYFQSLE-SQGYTVTEIPVD--K 122 (381)
T ss_pred HHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHHHHHH-hCCCEEEEEeeC--C
Confidence 345666777778889999999999999999888875 5789999999888776554 44 579999999974 4
Q ss_pred CccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhh
Q 019899 76 NFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEI 155 (334)
Q Consensus 76 ~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~ 155 (334)
++.+|++++++++++ +++++++++|+||||.+.| +++|.++|+++|+++++|+++... .....+.
T Consensus 123 ~~~~d~~~l~~~l~~------~~~lv~~~~~~n~tG~~~~---~~~I~~l~~~~~~~vivD~~~~~g----~~~~~~~-- 187 (381)
T PRK02948 123 SGLIRLVDLERAITP------DTVLASIQHANSEIGTIQP---IAEIGALLKKYNVLFHSDCVQTFG----KLPIDVF-- 187 (381)
T ss_pred CCCCCHHHHHHhcCC------CCEEEEEECCcCCcEeehh---HHHHHHHHHHcCCEEEEEChhhcc----ccccCcc--
Confidence 467999999999875 7889999999999999999 888999999999999999876531 1111211
Q ss_pred hhccccCCCcEEEEecccccCCCCCceEEEEeecCHHH-HHHHHH------hhcccCCChHHHHHHHHhhCChHHHHHHH
Q 019899 156 LEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESV-LAAAKK------LTRFCSISAPTQRLLISMLSDTKFIQEYL 228 (334)
Q Consensus 156 ~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 228 (334)
. .+.++++.|++|.+|++| +|+++. ++++ ...... ....++.+.+.+.++..++... .++.
T Consensus 188 -~-----~~~d~~~~s~~K~~gp~G--~G~l~~-~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~---~~~~ 255 (381)
T PRK02948 188 -E-----MGIDSLSVSAHKIYGPKG--VGAVYI-NPQVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAENI---LKNM 255 (381)
T ss_pred -c-----CCCCEEEecHHhcCCCCc--EEEEEE-cCCCCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHHHH---HHHH
Confidence 1 567788899999988777 788887 4443 111110 0134567778888888777542 2356
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccCCC-cee----EEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC-
Q 019899 229 ETNKRRIKKLYDSFVAGLKQLGIRCSESS-AGL----YCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI- 302 (334)
Q Consensus 229 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~g~----~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~- 302 (334)
.+.++++.+.++++.+.|+++++++.... ..+ .+.+.++.. +..++... ++++||.+++|..|...
T Consensus 256 ~~~~~~~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~i~~~~~~~~-------~~~~~~~~-l~~~gI~v~~g~~c~~~~ 327 (381)
T PRK02948 256 QEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCLPHIIGVTIKGI-------EGQYTMLE-CNRRGIAISTGSACQVGK 327 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCEEEeCCCccCcCCEEEEEeCCC-------CHHHHHHh-cccCCEEEEchHhcCCCC
Confidence 77788999999999999999887654221 111 111222221 23466666 56689999988864321
Q ss_pred ----------------CCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 303 ----------------EPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 303 ----------------~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
..+++|+|++. .|++|++++++.|++++++
T Consensus 328 ~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~ 374 (381)
T PRK02948 328 QEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQ 374 (381)
T ss_pred CCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence 14689999996 5999999999999998865
No 124
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.97 E-value=1.1e-28 Score=223.80 Aligned_cols=292 Identities=13% Similarity=0.093 Sum_probs=204.6
Q ss_pred hcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhh-----hhhccCcEEEEEeCCCC-CCccccHH
Q 019899 9 LGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRD-----IRFRTGVELIPVHCRST-DNFAFSIT 82 (334)
Q Consensus 9 ~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~-----~~~~~g~~v~~v~~~~~-~~~~~~~~ 82 (334)
+++.++++...|+++ ++++|+..++.+++++||+|++++|+|+++... ++ ..|.++..+++..+ +++.+|++
T Consensus 74 ~~~~~g~~~~~v~~~-sgt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~id~~ 151 (402)
T cd00378 74 AKKLFGAEYANVQPH-SGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVS-ASGKLFESVPYGVDPETGLIDYD 151 (402)
T ss_pred HHHHhCCCceeeecC-CcHHHHHHHHHHhcCCCCEEEEecCccCcccccccccccc-ccceeEEEecCCcCcccCCcCHH
Confidence 334455665556555 567999999999999999999999999877554 44 57877777776433 26789999
Q ss_pred HHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccc-cccccCCCCcchhhhhhhcccc
Q 019899 83 ALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIY-GGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 83 ~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~-~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
++++++++. +++++++++|+|| ...+ +++|.++|+++|+++++|++| .++.+.+.....+.
T Consensus 152 ~l~~~i~~~-----~~~~v~~~~~~~~--~~~~---~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~-------- 213 (402)
T cd00378 152 ALEKMALEF-----KPKLIVAGASAYP--RPID---FKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP-------- 213 (402)
T ss_pred HHHHHHHhC-----CCCEEEecCcccC--CCcC---HHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc--------
Confidence 999999752 7888888888775 4556 899999999999999999996 33333332111111
Q ss_pred CCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhccc--CCCh-HHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFC--SISA-PTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
+.+++++|+||++ +|.|.||++++++++.+.+......+ +.+. ....++..++.. .......+.++++.++
T Consensus 214 --~~dv~~~s~sK~l--~G~~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~--~~~~~~~~~~~~~~~~ 287 (402)
T cd00378 214 --GADVVTTTTHKTL--RGPRGGLILTRKGELAKKINSAVFPGLQGGPHLHVIAAKAVALKE--ALEPEFKAYAKQVVEN 287 (402)
T ss_pred --CCcEEEeccccCC--CCCCceEEEeccHHHHHHHHHHhCccccCCchHHHHHHHHHHHHH--HhhHHHHHHHHHHHHH
Confidence 2236789999987 77889999996658888887654332 2222 222232333321 1122446677889999
Q ss_pred HHHHHHHHHhCCCccc-CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcC----CCCCCeEEEEecC
Q 019899 239 YDSFVAGLKQLGIRCS-ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACH----CIEPGWFRCCFTS 313 (334)
Q Consensus 239 ~~~~~~~l~~~g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~----~~~~~~iRi~~~~ 313 (334)
++++.+.|++.|+.+. .+.+++++|+++++... +...+. .+++++||.+.++...+ ...+.++|+++..
T Consensus 288 ~~~l~~~L~~~g~~~~~~~~~~~~v~v~~~~~~~-----~~~~~~-~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~ 361 (402)
T cd00378 288 AKALAEALKERGFKVVSGGTDNHLVLVDLRPKGI-----TGKAAE-DALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPA 361 (402)
T ss_pred HHHHHHHHHhCCCeEeecCCCCeEEEEeCCccCC-----CHHHHH-HHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHH
Confidence 9999999999898875 45678999999974321 123344 45778999998643211 1134689999864
Q ss_pred -----CCcccHHHHHHHHHHHHHH
Q 019899 314 -----LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 314 -----~~~~~l~~~l~~l~~~~~~ 332 (334)
.+++|++.+++.|+++++.
T Consensus 362 ~~~~~~~~~di~~~~~~l~~~~~~ 385 (402)
T cd00378 362 MTTRGMGEEEMEEIADFIARALKD 385 (402)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHhc
Confidence 2589999999999998764
No 125
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.97 E-value=8.9e-29 Score=221.44 Aligned_cols=287 Identities=16% Similarity=0.168 Sum_probs=206.4
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITAL 84 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l 84 (334)
+++.++..++ .++++++++| ++++..++.+++++||+|+++.|+|+.+...++ ..|.+++.++. +|++.+
T Consensus 66 l~~~la~~~~-~~~~i~~~~G-~~~~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~-~~g~~~~~~~~-------~d~~~l 135 (360)
T TIGR00858 66 LEEELAEWKG-TEAALLFSSG-YLANVGVISALVGKGDLILSDALNHASLIDGCR-LSGARVRRYRH-------NDVEHL 135 (360)
T ss_pred HHHHHHHHhC-CCCEEEECch-HHHHHHHHHHhCCCCCEEEEEccccHHHHHHHH-hcCCceEEecC-------CCHHHH
Confidence 4444544444 3456777776 455556778888999999999999999999888 88998888773 578999
Q ss_pred HHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCC--cchhhhhhhccccC
Q 019899 85 DQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEE--FVSMAEILEAEEVD 162 (334)
Q Consensus 85 ~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~--~~~~~~~~~~~~~~ 162 (334)
++.+++.. +.+++++++.+++||+|...+ +++|.++|+++|+++|+||+|+.+.++... ......+.+
T Consensus 136 ~~~~~~~~--~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~----- 205 (360)
T TIGR00858 136 ERLLEKNR--GERRKLIVTDGVFSMDGDIAP---LPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKP----- 205 (360)
T ss_pred HHHHHHcc--cCCCeEEEEeCCccCCCCCcC---HHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCc-----
Confidence 99887520 024677888888999999999 899999999999999999999876654321 122222222
Q ss_pred CCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc--c--CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 163 KDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--C--SISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 163 ~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
.+++++++|+||+++++| ||+++ ++++.+.+...... + +.++..+.++..+++.. . ...++++++.++
T Consensus 206 ~~~~i~i~s~sK~~~~~g---G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~---~-~~~~~~~~~~~~ 277 (360)
T TIGR00858 206 EPVDIQVGTLSKALGSYG---AYVAG-SQALIDYLINRARTLIFSTALPPAVAAAALAALELI---Q-EEPWRREKLLAL 277 (360)
T ss_pred cCCcEEEEechhhhhccC---cEEEc-CHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHH---h-hCHHHHHHHHHH
Confidence 467899999999998766 89997 78888877643322 1 23344444444444321 2 224567889999
Q ss_pred HHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCC-CCCCeEEEEecC-CCc
Q 019899 239 YDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHC-IEPGWFRCCFTS-LTH 316 (334)
Q Consensus 239 ~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-~~~~~iRi~~~~-~~~ 316 (334)
++++.+.|+++++++..+ .+.++|+.++.. .++.++.+.|+ ++||.+.++..++. ...+++|++++. .++
T Consensus 278 ~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~l~-~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~ 349 (360)
T TIGR00858 278 IARLRAGLEALGFTLMPS-CTPIVPVIIGDN------ASALALAEELQ-QQGIFVGAIRPPTVPAGTSRLRLTLSAAHTP 349 (360)
T ss_pred HHHHHHHHHHcCCccCCC-CCCEEEEEeCCH------HHHHHHHHHHH-HCCeeEeeeCCCCCCCCCceEEEEEcCCCCH
Confidence 999999999888776544 566788887642 23467888865 57999998765532 234689999985 599
Q ss_pred ccHHHHHHHHH
Q 019899 317 EDIPLVIERIQ 327 (334)
Q Consensus 317 ~~l~~~l~~l~ 327 (334)
+++++++++|+
T Consensus 350 ~~i~~~l~~l~ 360 (360)
T TIGR00858 350 GDIDRLAEALK 360 (360)
T ss_pred HHHHHHHHhhC
Confidence 99999998763
No 126
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.97 E-value=1.7e-28 Score=222.52 Aligned_cols=284 Identities=18% Similarity=0.158 Sum_probs=202.4
Q ss_pred CcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 18 SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
++|++|+| ++++..++.+++++||.|++++|+|+++...+. ..|.+++.++. .|++++++.+++....+.+
T Consensus 104 ~~i~~tsG-~~a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~~-~~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~ 174 (397)
T PRK06939 104 DAILYSSC-FDANGGLFETLLGKEDAIISDALNHASIIDGVR-LCKAKRYRYAN-------NDMADLEAQLKEAKEAGAR 174 (397)
T ss_pred cEEEEcCh-HHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHH-hcCCceEEeCC-------CCHHHHHHHHHhhhccCCC
Confidence 67777777 778999999999999999999999999998888 88888887763 4789999888754333346
Q ss_pred eeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEecccccCC
Q 019899 98 VRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLS 177 (334)
Q Consensus 98 ~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~ 177 (334)
+++++..+..|++|...+ +++|.++|++++++||+||+|+...+........ ... ++..+.+++++|+||+++
T Consensus 175 ~~~v~~~~v~~~~G~~~~---~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~-~~~---~~~~~~~i~~~S~sK~~~ 247 (397)
T PRK06939 175 HKLIATDGVFSMDGDIAP---LPEICDLADKYDALVMVDDSHAVGFVGENGRGTV-EHF---GVMDRVDIITGTLGKALG 247 (397)
T ss_pred CeEEEEecCcCCCCCcCC---HHHHHHHHHHhCCEEEEECcccccCcCCCCCCHH-HHc---CCCCCCcEEEEECHHHhC
Confidence 776776666899999877 9999999999999999999996432221111111 111 122356789999999994
Q ss_pred CCCceEEEEeecCHHHHHHHHHhhcc--cC--CChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcc
Q 019899 178 LPGFRTGVIYSYNESVLAAAKKLTRF--CS--ISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRC 253 (334)
Q Consensus 178 ~~g~r~g~i~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 253 (334)
|.|+||+++ ++++++.+...... ++ .++..+.++..+++. +. ...+++++++++++++.+.|++.+++.
T Consensus 248 --g~r~G~v~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~---~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~ 320 (397)
T PRK06939 248 --GASGGYTAG-RKEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLEL---LE-ESDELRDRLWENARYFREGMTAAGFTL 320 (397)
T ss_pred --ccCceEEEe-CHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHH---Hh-cCHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 458999998 78888888754322 22 223333333333322 12 124667888999999999999888877
Q ss_pred cCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCC--CCCCeEEEEecC-CCcccHHHHHHHHHHHH
Q 019899 254 SESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHC--IEPGWFRCCFTS-LTHEDIPLVIERIQKVA 330 (334)
Q Consensus 254 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~ 330 (334)
..+.++++. +.++.. .++.++++.|++ +||.+.++. |+. ...+++|++++. .+++++++++++|++++
T Consensus 321 ~~~~~~~~~-~~~~~~------~~~~~~~~~L~~-~gI~v~~~~-~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~ 391 (397)
T PRK06939 321 GPGEHPIIP-VMLGDA------KLAQEFADRLLE-EGVYVIGFS-FPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVG 391 (397)
T ss_pred CCCCCCEEE-EEECCH------HHHHHHHHHHHH-CCceEeeeC-CCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 666666543 334321 234678888666 599988654 322 224689999875 68999999999999998
Q ss_pred HHc
Q 019899 331 ETC 333 (334)
Q Consensus 331 ~~~ 333 (334)
++.
T Consensus 392 ~~~ 394 (397)
T PRK06939 392 KEL 394 (397)
T ss_pred HHh
Confidence 764
No 127
>PLN02483 serine palmitoyltransferase
Probab=99.97 E-value=1.5e-28 Score=225.86 Aligned_cols=299 Identities=14% Similarity=0.156 Sum_probs=209.5
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITAL 84 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l 84 (334)
+++.+++.++ .++.|++++ ++.++..++.+++++||.|++++|+|.++...++ ..|.+++.++. .|++++
T Consensus 151 le~~lA~~~g-~~~ai~~~~-G~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~~~~-~~Ga~v~~~~~-------~d~~~l 220 (489)
T PLN02483 151 LEELVARFVG-KPAAIVFGM-GYATNSTIIPALIGKGGLIISDSLNHNSIVNGAR-GSGATIRVFQH-------NTPSHL 220 (489)
T ss_pred HHHHHHHHhC-CCcEEEECC-HHHHHHHHHHHhCCCCCEEEEcchhhHHHHHHHH-HcCCeEEEEeC-------CCHHHH
Confidence 4445555555 344566655 5566778888899999999999999999999998 89999999984 256778
Q ss_pred HHHHHHHHHc-CCc-----eeEEEEeCC-CCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccC--CCCcchhhhh
Q 019899 85 DQAFNQARKR-GVK-----VRGILICNP-ANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFG--NEEFVSMAEI 155 (334)
Q Consensus 85 ~~~l~~~~~~-~~~-----~~~i~~~~p-~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~--~~~~~~~~~~ 155 (334)
++.+++.... +.+ .++++++.+ .|++|.+.+ +++|+++|++||+++|+||+|+...++ |....++..+
T Consensus 221 e~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~---l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v 297 (489)
T PLN02483 221 EEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCK---LPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGV 297 (489)
T ss_pred HHHHHhhhhccccccccCCceEEEEECCCCCCCCcccC---HHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCC
Confidence 7777653211 112 255666666 689999998 999999999999999999999854432 2222333333
Q ss_pred hhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc--c--CCChHHHHHHHHhhCC---hHHHHHHH
Q 019899 156 LEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--C--SISAPTQRLLISMLSD---TKFIQEYL 228 (334)
Q Consensus 156 ~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~l~~---~~~~~~~~ 228 (334)
.+ .+.+++++|+||++|+.| ||+++ ++++++.++..... + ..++....++.+.++. .+ ..+..
T Consensus 298 ~~-----~~~dI~~~SfSKs~g~~G---G~i~~-~~~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~-g~~~~ 367 (489)
T PLN02483 298 DP-----ADVDIMMGTFTKSFGSCG---GYIAG-SKELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGED-GTNRG 367 (489)
T ss_pred Cc-----ccCcEEEEecchhcccCc---eEEEc-CHHHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCc-cccch
Confidence 22 467899999999998776 99997 88999998865321 2 2333333333333321 10 01223
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcC-CCCCCeE
Q 019899 229 ETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACH-CIEPGWF 307 (334)
Q Consensus 229 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~~~i 307 (334)
.+++++++++++++.+.|+++|+.+..+.++..+|+.+... .+..++.+.|++ +||.+.|..+.. +...+++
T Consensus 368 ~~~~~~l~~~~~~l~~~L~~~G~~v~~~~~sp~~~l~l~~~------~~~~~~~~~Ll~-~GI~v~~~~fp~~p~~~~~v 440 (489)
T PLN02483 368 AQKLAQIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNP------AKIPAFSRECLK-QNVAVVVVGFPATPLLLARA 440 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCEEEEEECCH------HHHHHHHHHHHH-CCcEEeeeCCCCCCCCCceE
Confidence 45567899999999999999998877666666666655432 123578888766 799998733322 2234789
Q ss_pred EEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 308 RCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 308 Ri~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
|++++. .+++++++++++|.++++..
T Consensus 441 Ri~isa~~t~edId~~l~~L~~~~~~~ 467 (489)
T PLN02483 441 RICISASHSREDLIKALEVISEVGDLV 467 (489)
T ss_pred EEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 999985 69999999999999987654
No 128
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.97 E-value=2.6e-28 Score=218.06 Aligned_cols=293 Identities=16% Similarity=0.146 Sum_probs=210.7
Q ss_pred hhhhhhcCCCCCCCC--cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCC-CC-hhhhhhhccCcEEEEEeCCCCCCccc
Q 019899 4 FMSQVLGQAVSFDPS--QIVLTAGATPAVEILCFCLADHGNALLVPSPYY-PG-FDRDIRFRTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~--~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~-~~-~~~~~~~~~g~~v~~v~~~~~~~~~~ 79 (334)
.+++.+++.++++++ .|++++|+++++..++.+++.++|++++..+.+ +. +...++ ..|.+++.++.+ +++.+
T Consensus 35 ~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~~~~~~~~~~~a~-~~g~~~~~i~~~--~~~~~ 111 (355)
T TIGR03301 35 QVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLINGAYGERLAKICE-YLGIPHTDLNFS--EYEPP 111 (355)
T ss_pred HHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEECCCchhhHHHHHHH-HcCCceEEEecC--CCCCC
Confidence 345555566666665 578899999999999999988888877665554 43 334455 789999999873 45688
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
|++++++++++. .+++++++++++||||...| +++|+++|+++++++|+|++++... ...++. .
T Consensus 112 d~~~l~~~l~~~----~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~~~~~livD~~~s~g~----~~~~~~---~-- 175 (355)
T TIGR03301 112 DLNRIEEALAAD----PDITHVATVHHETTTGILNP---LEAIAKVARSHGAVLIVDAMSSFGA----IPIDIE---E-- 175 (355)
T ss_pred CHHHHHHHHHhC----CCceEEEEEecCCcccchhH---HHHHHHHHHHcCCEEEEEeccccCC----cccchh---h--
Confidence 999999999752 25677888999999999999 8999999999999999999876421 112222 1
Q ss_pred ccCCCcEEEEecccccC-CCCCceEEEEeecCHHHHHHHHHh-------------------hcccCCChHHHHHHHHhhC
Q 019899 160 EVDKDRVHIIYGLSKDL-SLPGFRTGVIYSYNESVLAAAKKL-------------------TRFCSISAPTQRLLISMLS 219 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~-~~~g~r~g~i~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~l~ 219 (334)
.+.++++.|++|++ |++| +||+++ ++++++.+... ...++.+...+.++..+++
T Consensus 176 ---~~~d~~~~s~~K~l~~~~G--~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~ 249 (355)
T TIGR03301 176 ---LDVDALIASANKCLEGVPG--FGFVIA-RRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALE 249 (355)
T ss_pred ---cCccEEEecCCcccccCCc--eeEEEE-CHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHH
Confidence 45678889999987 4455 699998 77877776521 0123456666666666664
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC---CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCC
Q 019899 220 DTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSES---SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPG 296 (334)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g 296 (334)
.... +..+.+..++++++++++.+.|+++|+++..+ .+++++|+.+|.... .+..++.+. ++++||.+.+|
T Consensus 250 ~~~~-~g~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-l~~~gi~i~~~ 323 (355)
T TIGR03301 250 ELEA-EGGVPARIARYRRNRELLVDGLRALGFQPLLPERWQSPIIVSFLYPDDPD----FDFDDFYQE-LKERGFVIYPG 323 (355)
T ss_pred HHHH-cccHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCCcEEEEECCCCCc----chHHHHHHH-HHHCCEEEECC
Confidence 3210 11246677788899999999999888875433 345667888875211 123467777 55689999998
Q ss_pred CCcCCCCCCeEEEEec-CCCcccHHHHHHHHHHHH
Q 019899 297 SACHCIEPGWFRCCFT-SLTHEDIPLVIERIQKVA 330 (334)
Q Consensus 297 ~~~~~~~~~~iRi~~~-~~~~~~l~~~l~~l~~~~ 330 (334)
..+. .+++|+++. ..++++++++++.|++++
T Consensus 324 ~~~~---~~~iRis~~~~~~~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 324 KLTL---ADTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred cccc---ccEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence 6543 278999985 469999999999998753
No 129
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.97 E-value=2.1e-28 Score=218.12 Aligned_cols=292 Identities=19% Similarity=0.199 Sum_probs=207.3
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITAL 84 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l 84 (334)
+++.+++.++. ++.++++++++++.+++.+++++||+|+++.|.|+++...++ ..|.++++++. +|.+.+
T Consensus 51 l~~~la~~~~~--~~~iv~~sg~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~-~~g~~~~~~~~-------~~~~~l 120 (349)
T cd06454 51 LEEELAEFHGK--EAALVFSSGYAANDGVLSTLAGKGDLIISDSLNHASIIDGIR-LSGAKKRIFKH-------NDMEDL 120 (349)
T ss_pred HHHHHHHHhCC--CCEEEeccHHHHHHHHHHHhcCCCCEEEEehhhhHHHHHHHH-HcCCceEEecC-------CCHHHH
Confidence 44445444544 345666677789888888889999999999999999988888 88999888762 477888
Q ss_pred HHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCC
Q 019899 85 DQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKD 164 (334)
Q Consensus 85 ~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (334)
++.+++.. +..+++++++++++||||...+ +++|+++|+++|+++|+|++|+...++... ........ ...+
T Consensus 121 e~~i~~~~-~~~~~~~v~~~~~~~~tG~~~~---~~~i~~~~~~~~~~livD~a~~~g~~~~~~-~~~~~~~~---~~~~ 192 (349)
T cd06454 121 EKLLREAR-RPYGKKLIVTEGVYSMDGDIAP---LPELVDLAKKYGAILFVDEAHSVGVYGPHG-RGVEEFGG---LTDD 192 (349)
T ss_pred HHHHHHhh-ccCCCeEEEEeccccCCCCccC---HHHHHHHHHHcCCEEEEEccccccccCCCC-CChhhhcc---cccc
Confidence 88887532 1235788888899999999988 899999999999999999999754332111 11111110 1156
Q ss_pred cEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc----cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 019899 165 RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF----CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYD 240 (334)
Q Consensus 165 ~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (334)
.+++++|+||.++++| ||++. ++++.+.+...... .+.++..+.++...++.. .+ ....++++.++++
T Consensus 193 ~~i~~~s~sK~~~~~g---G~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~-~~~~~~~~~~~~~ 264 (349)
T cd06454 193 VDIIMGTLGKAFGAVG---GYIAG-SKELIDYLRSYARGFIFSTSLPPAVAAAALAALEVL---QG-GPERRERLQENVR 264 (349)
T ss_pred CcEEEeechhhhcccC---CEEEC-CHHHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHH---hc-CHHHHHHHHHHHH
Confidence 7899999999998655 88887 77887777654322 234555555555555332 22 3556788889999
Q ss_pred HHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCC-CCCCeEEEEecC-CCccc
Q 019899 241 SFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHC-IEPGWFRCCFTS-LTHED 318 (334)
Q Consensus 241 ~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-~~~~~iRi~~~~-~~~~~ 318 (334)
.+.+.|++.|+....+.++++.++.++.. .+..++...|++ +||.+.++.+... ...+++|++++. .++++
T Consensus 265 ~l~~~l~~~g~~~~~~~~~~~~~~~~~~~------~~~~~~~~~L~~-~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~ 337 (349)
T cd06454 265 YLRRGLKELGFPVGGSPSHIIPPLIGDDP------AKAVAFSDALLE-RGIYVQAIRYPTVPRGTARLRISLSAAHTKED 337 (349)
T ss_pred HHHHHHHhcCCcccCCCCCcEEEEeCCCh------HHHHHHHHHHHh-CCceEEEecCCccCCCCCeEEEEEeCCCCHHH
Confidence 99999998888876665666555544321 244678888666 5999987643211 124789999985 69999
Q ss_pred HHHHHHHHHHH
Q 019899 319 IPLVIERIQKV 329 (334)
Q Consensus 319 l~~~l~~l~~~ 329 (334)
+++++++|+++
T Consensus 338 i~~~~~~l~~~ 348 (349)
T cd06454 338 IDRLLEALKEV 348 (349)
T ss_pred HHHHHHHHHHh
Confidence 99999999864
No 130
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.97 E-value=5.1e-28 Score=218.48 Aligned_cols=295 Identities=14% Similarity=0.095 Sum_probs=216.1
Q ss_pred hcCCCCCCC-CcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChh--hhhhhccCcEEEEEeCCCCCCccccHHHHH
Q 019899 9 LGQAVSFDP-SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFD--RDIRFRTGVELIPVHCRSTDNFAFSITALD 85 (334)
Q Consensus 9 ~~~~~~~~~-~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~--~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~ 85 (334)
+++.++.+. +.+++++++++++..++..++++||+|+++++.|++.. ..++ ..|.+++.++.+ .+..+|+++++
T Consensus 51 l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~~~~~~~-~~g~~v~~v~~~--~~~~~~~~~l~ 127 (401)
T PLN02409 51 VKYIFKTKSGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRIGQFSLLWIDQMQ-RLNFDVDVVESP--WGQGADLDILK 127 (401)
T ss_pred HHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCchhHHHHHHHH-HcCCceEEEECC--CCCCCCHHHHH
Confidence 333444554 46888889999999999999999999999999887653 4555 789999999974 33458999999
Q ss_pred HHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCc
Q 019899 86 QAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDR 165 (334)
Q Consensus 86 ~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (334)
+++++. ...+++++++++++||||.++|.+++.++++ |+++|+++++|++++. +....++.. ++.
T Consensus 128 ~~l~~~--~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~-~~~~g~~~vvD~v~s~----g~~~id~~~--------~~~ 192 (401)
T PLN02409 128 SKLRQD--TNHKIKAVCVVHNETSTGVTNDLAGVRKLLD-CAQHPALLLVDGVSSI----GALDFRMDE--------WGV 192 (401)
T ss_pred HHHhhC--cCCCccEEEEEeecccccccCCHHHHHHHHh-hhccCcEEEEEccccc----CCccccccc--------cCc
Confidence 999851 0026899999999999999999444444444 9999999999999864 211122211 466
Q ss_pred EEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--------------------ccCCChHHHHHHHHhhCChHHHH
Q 019899 166 VHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--------------------FCSISAPTQRLLISMLSDTKFIQ 225 (334)
Q Consensus 166 ~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~l~~~~~~~ 225 (334)
++++.|.+|+++.| .++|+++. +++..+.+..... .++.+...+.++..+++.. .+
T Consensus 193 D~~~~s~~K~l~~P-~G~G~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~--~~ 268 (401)
T PLN02409 193 DVALTGSQKALSLP-TGLGIVCA-SPKALEASKTAKSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLI--FE 268 (401)
T ss_pred cEEEEcCccccCcC-CCcceeEE-CHHHHHHHhcCCCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHH--HH
Confidence 78888889999643 36999998 7777777653210 2244455566666666432 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC----ceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCC
Q 019899 226 EYLETNKRRIKKLYDSFVAGLKQLGIRCSESS----AGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHC 301 (334)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~ 301 (334)
..+++..++++++.+++.+.|+++|+++..+. .+..+++.+|...+ +.++...+++++||.+.+|...
T Consensus 269 ~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~~~~~~~s~~v~~~~~p~~~~------~~~l~~~l~~~~~i~i~~G~~~-- 340 (401)
T PLN02409 269 EGLENVIARHARLGEATRLAVEAWGLKLCTKKPEWRSDTVTAVVVPEGID------SAEIVKNAWKKYNLSLGLGLNK-- 340 (401)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcccceEEEeCCCCCC------HHHHHHHHHHhCCEEEEcCCCc--
Confidence 44678888999999999999998898876542 22345677775433 3578888888899999988752
Q ss_pred CCCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 302 IEPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 302 ~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
.....+|++... .+++++..++++|.+++.+.
T Consensus 341 ~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~ 373 (401)
T PLN02409 341 VAGKVFRIGHLGNVNELQLLGALAGVEMVLKDV 373 (401)
T ss_pred ccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 246789999764 69999999999999998764
No 131
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.97 E-value=1.2e-27 Score=214.46 Aligned_cols=295 Identities=16% Similarity=0.163 Sum_probs=210.6
Q ss_pred hhhhhcCCCCCCC--CcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChh--hhhhhccCcEEEEEeCCCCCCcccc
Q 019899 5 MSQVLGQAVSFDP--SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFD--RDIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 5 ~~~~~~~~~~~~~--~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~--~~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
+++.+++.++.++ +.+++++++++++..++.++..+||+|+++.+.|++.. ..++ ..|.+++.++.. .++.+|
T Consensus 42 ~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~~~~~~~~~~~~~-~~g~~~~~i~~~--~~~~~d 118 (368)
T PRK13479 42 VRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPDNGAYGARIAQIAE-YLGIAHVVLDTG--EDEPPD 118 (368)
T ss_pred HHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCCchHHHHHHHHH-HcCCcEEEEECC--CCCCCC
Confidence 3444555556654 45889999999999999999999999999988877653 5556 789999999973 345789
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++. .+++++++++|+||||...| +++|.++|+++|+++++|++++. +....++. .
T Consensus 119 ~~~l~~~l~~~----~~~~~v~~~~~~~~tG~~~~---~~~i~~l~~~~~~~livDa~~~~----g~~~~~~~---~--- 181 (368)
T PRK13479 119 AAEVEAALAAD----PRITHVALVHCETTTGILNP---LDEIAAVAKRHGKRLIVDAMSSF----GAIPIDIA---E--- 181 (368)
T ss_pred HHHHHHHHHhC----CCCcEEEEEcccCccccccC---HHHHHHHHHHcCCEEEEEccccc----CCcccccc---c---
Confidence 99999998752 25678999999999999999 88999999999999999976543 21122222 1
Q ss_pred cCCCcEEEEecccccC-CCCCceEEEEeecCHHHHHHHHHhhc-------------------ccCCChHHHHHHHHhhCC
Q 019899 161 VDKDRVHIIYGLSKDL-SLPGFRTGVIYSYNESVLAAAKKLTR-------------------FCSISAPTQRLLISMLSD 220 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~-~~~g~r~g~i~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~l~~ 220 (334)
.+.++++.|++|++ |++| +||+++ ++++++.+..... .++.+.....++..+++.
T Consensus 182 --~~~d~~v~s~~K~l~g~~G--~G~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~ 256 (368)
T PRK13479 182 --LGIDALISSANKCIEGVPG--FGFVIA-RRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLE 256 (368)
T ss_pred --cCceEEEecCccccccCCC--ceEEEE-CHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHH
Confidence 34557788999987 5566 699998 7777777654211 134555555565555543
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC---ceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCC
Q 019899 221 TKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESS---AGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGS 297 (334)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~ 297 (334)
... ...+.+..+++.++++++.+.|+++|+++..+. .+..+.+.++.... .+..++.+.| .++||.+.+|.
T Consensus 257 l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~L-~~~gi~v~~g~ 330 (368)
T PRK13479 257 LEE-EGGVPARGARYANNQRTLVAGMRALGFEPLLDAEIQSPIIVTFHAPADPA----YDFKEFYERL-KEQGFVIYPGK 330 (368)
T ss_pred HHH-hhCHHHHHHHHHHHHHHHHHHHHHcCCcccCCchhcCceEEEEECCCCCC----cCHHHHHHHH-HHCCEEEecCC
Confidence 210 123456678889999999999999998765332 22223334443211 1235777784 55799999876
Q ss_pred CcCCCCCCeEEEEe-cCCCcccHHHHHHHHHHHHHHc
Q 019899 298 ACHCIEPGWFRCCF-TSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 298 ~~~~~~~~~iRi~~-~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
.+ ..+++|++. +..+++|++++++.|++++++.
T Consensus 331 ~~---~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 331 LT---QVDTFRIGCIGDVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred CC---CCCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence 43 246899986 5579999999999999998765
No 132
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.97 E-value=9.5e-28 Score=216.62 Aligned_cols=282 Identities=16% Similarity=0.163 Sum_probs=202.2
Q ss_pred CCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCC
Q 019899 17 PSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGV 96 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~ 96 (334)
++.+++++| ++++..++.+++++||.|+++.|.|+++...+. ..|.+++.++ .+|++++++.+++.. ..
T Consensus 94 ~~~i~~~sG-~~a~~~a~~~~~~~gd~vi~~~~~~~~~~~~~~-~~g~~~~~~~-------~~d~~~l~~~l~~~~--~~ 162 (385)
T TIGR01825 94 EAALVFQSG-FNTNQGVLSALLRKGDIVLSDELNHASIIDGLR-LTKATKKIYK-------HADMDDLDRVLRENP--SY 162 (385)
T ss_pred CcEEEECcH-HHHHHHHHHHhCCCCCEEEEEccccHHHHHHHH-hcCCceEEeC-------CCCHHHHHHHHHhhc--cC
Confidence 356777766 567778888889999999999999999988877 7788776654 468888988887531 12
Q ss_pred ceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEecccccC
Q 019899 97 KVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDL 176 (334)
Q Consensus 97 ~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~ 176 (334)
+++++++.+++||||.+.+ +++|.++|++||+++|+||+|+.+.++.........+ +.+.+.++++.|+||++
T Consensus 163 ~~~~v~~~~v~~~tG~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~s~sK~~ 235 (385)
T TIGR01825 163 GKKLIVTDGVFSMDGDVAP---LPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHF----GLEDKVDIQVGTLSKAI 235 (385)
T ss_pred CCeEEEEecCCcCCCCccC---HHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhc----CCCcCCcEEEEeccHHh
Confidence 5777877777999999999 8999999999999999999998766542111111111 12257789999999999
Q ss_pred CCCCceEEEEeecCHHHHHHHHHhhccc----CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Q 019899 177 SLPGFRTGVIYSYNESVLAAAKKLTRFC----SISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIR 252 (334)
Q Consensus 177 ~~~g~r~g~i~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 252 (334)
+++| ||+++ ++++.+.+......+ ..++..+.++.++++.. .+. .+..+++.++++++.+.|++.|++
T Consensus 236 ~~~g---G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~---~~~-~~~~~~~~~~~~~l~~~L~~~g~~ 307 (385)
T TIGR01825 236 GVVG---GYAAG-HKELIEYLKNRARPFLFSTAQPPAVVAALAAAVDEL---QRS-PELMERLWDNTRFFKAGLGKLGYD 307 (385)
T ss_pred hcCC---CEEec-CHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHH---hcC-HHHHHHHHHHHHHHHHHHHHcCCC
Confidence 8665 99987 788888886543221 23456666666665432 111 234566777889999999988888
Q ss_pred ccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCC--CCCCeEEEEecC-CCcccHHHHHHHHHHH
Q 019899 253 CSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHC--IEPGWFRCCFTS-LTHEDIPLVIERIQKV 329 (334)
Q Consensus 253 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~~iRi~~~~-~~~~~l~~~l~~l~~~ 329 (334)
+..+.+++ +++.++.. .+..+++..|+++ ||.+.+ ..++. ....++|++++. .+++++++++++++++
T Consensus 308 ~~~~~~~~-~~~~~~~~------~~~~~~~~~L~~~-gi~v~~-~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~ 378 (385)
T TIGR01825 308 TGGSETPI-TPVVIGDE------KAAQEFSRRLFDE-GIFAQS-IVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKV 378 (385)
T ss_pred CCCCCCCE-EEEEECCH------HHHHHHHHHHHHC-CcEEcc-cCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 87766654 33444321 2345788887775 998854 33332 234689998864 7999999999999999
Q ss_pred HHHc
Q 019899 330 AETC 333 (334)
Q Consensus 330 ~~~~ 333 (334)
+++.
T Consensus 379 ~~~~ 382 (385)
T TIGR01825 379 GKEL 382 (385)
T ss_pred HHHh
Confidence 8764
No 133
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.97 E-value=4.5e-28 Score=217.34 Aligned_cols=297 Identities=15% Similarity=0.182 Sum_probs=212.0
Q ss_pred CCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCC--------CccccHHHHHHHH
Q 019899 17 PSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTD--------NFAFSITALDQAF 88 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~--------~~~~~~~~l~~~l 88 (334)
.+++++|+|+++|+.+++.+++++||.| +++|.|..+...+. ..|.+++.+++++.. .+.+|++.|++++
T Consensus 68 ~~~vv~t~~Gt~Al~la~~al~~pGD~V-~~~~~f~~~~~~i~-~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I 145 (431)
T cd00617 68 FKHIIPTHQGRGAENILFSILLKPGRTV-PSNMHFDTTRGHIE-ANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLI 145 (431)
T ss_pred CCeEEEcCCHHHHHHHHHHHhCCCCCEE-ccCCcccchHHHHH-hCCCEeEEEecccccccccccCCCCCcCHHHHHHHh
Confidence 4689999999999999999999999977 68999999988888 899999999986432 2459999999999
Q ss_pred HHHHHcCCceeEEEEeCCCCCc-ccCCCHHHHHHHHHHHHhcCcEEEEecccccc--cc-----CCCCcchhhhhhhccc
Q 019899 89 NQARKRGVKVRGILICNPANPV-GNIIPRETLYELLDFAREKNIHVISDEIYGGS--IF-----GNEEFVSMAEILEAEE 160 (334)
Q Consensus 89 ~~~~~~~~~~~~i~~~~p~npt-G~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~--~~-----~~~~~~~~~~~~~~~~ 160 (334)
++. ...++++|++++|+||+ |++++.++++++.++|++||++||+|+++... .+ ++....++.+..
T Consensus 146 ~~~--~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~---- 219 (431)
T cd00617 146 DEV--GAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIA---- 219 (431)
T ss_pred Ccc--cCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHH----
Confidence 852 01247889999999998 99999999999999999999999999995421 11 122223333321
Q ss_pred cCCCcEEEEecccccCCCCCce------EEEEeecCHHHHHHHHHhh-------cccCCChHHHHHHHHhhCChHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFR------TGVIYSYNESVLAAAKKLT-------RFCSISAPTQRLLISMLSDTKFIQEY 227 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r------~g~i~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~l~~~~~~~~~ 227 (334)
+.+.|++|.+.++|.| .||++++++++.+.++.+. ++.+.+.....+++..+..... .
T Consensus 220 ------~e~~s~sd~~~mS~~K~~~~~~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~-~-- 290 (431)
T cd00617 220 ------REMFSYADGCTMSAKKDGLVNIGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVE-E-- 290 (431)
T ss_pred ------HHhhccCCEEEEEeecCCCCccceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhccc-H--
Confidence 1233444444444443 5789986667888887532 1122333433444434433110 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCC--CChhhHHHHHHHHHHhcCeEEcC-CCC-cCC--
Q 019899 228 LETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPS--YSEKGELELWDKLLNIAKINVTP-GSA-CHC-- 301 (334)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~gi~v~~-g~~-~~~-- 301 (334)
..+.+++. +++++.+.|++.|+++..|.+++++|++.+...+. ....++.+++.+|+++.||.+.. |+. ++.
T Consensus 291 -~~l~~~~~-~r~~l~~~L~~~G~~v~~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~ 368 (431)
T cd00617 291 -DYLRHRVE-QVRYLGDRLDEAGVPIVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDP 368 (431)
T ss_pred -HHHHHHHH-HHHHHHHHHHHCCCCccCCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCC
Confidence 22333333 55899999999999999999999999998864321 12235788999999999998643 442 111
Q ss_pred C-------CCCeEEEEecC--CCcccHHHHHHHHHHHHHH
Q 019899 302 I-------EPGWFRCCFTS--LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 302 ~-------~~~~iRi~~~~--~~~~~l~~~l~~l~~~~~~ 332 (334)
. .-+.+|+.+.. .|.++++.+.+.+..+.++
T Consensus 369 ~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~ 408 (431)
T cd00617 369 NTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYER 408 (431)
T ss_pred CCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHhh
Confidence 1 12579999984 5999999999999998875
No 134
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.97 E-value=1.1e-27 Score=215.62 Aligned_cols=300 Identities=14% Similarity=0.137 Sum_probs=208.7
Q ss_pred hhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHH
Q 019899 4 FMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITA 83 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~ 83 (334)
-+++.+++.+++ +++++++|+++++.+++.+++++||+|+++.++|.+....++ ..|.+++.++...++++.+|++.
T Consensus 67 ~l~~~lA~~~g~--~~~~~~~g~t~a~~~al~~l~~~gd~Vlv~~~~h~s~~~~~~-~~G~~~~~v~~~~~~~~~~d~~~ 143 (387)
T PRK09331 67 DFHEDLAEFLGM--DEARVTHGAREGKFAVMHSLCKKGDYVVLDGLAHYTSYVAAE-RAGLNVREVPKTGYPEYKITPEA 143 (387)
T ss_pred HHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHH-HcCCEEEEEeCccCcCCCcCHHH
Confidence 345555655554 568899999999999999999999999999999999888887 88999999997433466799999
Q ss_pred HHHHHHHHH-HcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccC
Q 019899 84 LDQAFNQAR-KRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVD 162 (334)
Q Consensus 84 l~~~l~~~~-~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (334)
+++++++.. ..++++++|++++|+||||.+.+ +++|.++|+++|+++++|++|+.... ..+...
T Consensus 144 l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~---l~~I~~la~~~g~~livD~a~~~g~~----~~~~~~-------- 208 (387)
T PRK09331 144 YAEKIEEVKEETGKPPALALLTHVDGNYGNLAD---AKKVAKVAHEYGIPFLLNGAYTVGRM----PVDGKK-------- 208 (387)
T ss_pred HHHHHHHhhhccCCCCEEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCcccCCc----CCCHHH--------
Confidence 999997531 12346899999999999999999 99999999999999999999985221 122221
Q ss_pred CCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhccc--------C--CChHHHHHHHHhhCChHHHHHHHHHHH
Q 019899 163 KDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFC--------S--ISAPTQRLLISMLSDTKFIQEYLETNK 232 (334)
Q Consensus 163 ~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~--------~--~~~~~~~~~~~~l~~~~~~~~~~~~~~ 232 (334)
.+.++++.|++|+++ .+.++|++++ ++++++.+.+....+ + .++....++...+ +.+.+... ..
T Consensus 209 ~g~D~~~~s~~K~l~-~~~~~G~l~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal---~~~~~~~~-~~ 282 (387)
T PRK09331 209 LGADFIVGSGHKSMA-ASAPSGVLAT-TEEYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASF---PHVVERVK-RW 282 (387)
T ss_pred cCCCEEEeeCccccc-CCCCEEEEEE-CHHHHhhcccccCCCcccceeeeceecCchHHHHHHHHH---HHHHHHHH-HH
Confidence 456788999999997 5568999998 778777765432211 1 1111222222222 22223332 34
Q ss_pred HHHHHHHHHHHHHHHhC-CCcccC--CCceeEEeeecCCcCC--CCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeE
Q 019899 233 RRIKKLYDSFVAGLKQL-GIRCSE--SSAGLYCWADMSGLIP--SYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWF 307 (334)
Q Consensus 233 ~~~~~~~~~~~~~l~~~-g~~~~~--~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~i 307 (334)
++..++.+++.+.|+++ |+++.. +....++.++.|.... ......+.++.+.| +++||...+.. ....+
T Consensus 283 ~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L-~~~gI~~~~~~-----~~~i~ 356 (387)
T PRK09331 283 DEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEEL-KKRGIHGIKPG-----ATKEF 356 (387)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCCchhHHhhhccccchhHHHHH-HHcCceEEccC-----CceEE
Confidence 45567788999999998 888763 2223344456552211 01112335677785 56799843211 13456
Q ss_pred EEEecCCCcccHHHHHHHHHHHHHHc
Q 019899 308 RCCFTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 308 Ri~~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
|+.....++++++++++.|+++++++
T Consensus 357 ri~~~g~t~~di~~l~~aL~~i~~~~ 382 (387)
T PRK09331 357 KLSTYGLTWEQVEYVADAFKEIAEKY 382 (387)
T ss_pred EEEeccCCHHHHHHHHHHHHHHHHhc
Confidence 77664379999999999999998764
No 135
>PLN02721 threonine aldolase
Probab=99.97 E-value=2e-27 Score=212.11 Aligned_cols=297 Identities=16% Similarity=0.145 Sum_probs=198.8
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcC-CCCeEEecCCCCCChhh---hhhhccCcEEEEEeCCCCCCcccc
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLAD-HGNALLVPSPYYPGFDR---DIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~-~gd~vl~~~p~~~~~~~---~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
+++.+++.++. +.+++++++++++..++.++++ +||+|++++|+|.+... .+. ..|.+++.+|.+ +++.+|
T Consensus 45 l~~~la~~~~~--~~~~~~~~Gs~a~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~--~~~~~d 119 (353)
T PLN02721 45 LEEEMAKIFGK--EAALFVPSGTMGNLISVLVHCDVRGSEVILGDNSHIHLYENGGIST-LGGVHPRTVKNN--EDGTMD 119 (353)
T ss_pred HHHHHHHHhCC--ceeEEecCccHHHHHHHHHHccCCCCeEEEcCccceehhcccchhh-hcCceeEecCCC--cCCCcC
Confidence 34445554544 3356666677777788887777 99999999999876655 345 689999998863 445789
Q ss_pred HHHHHHHHHHHHHc-CCceeEEEEeCC-CCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhc
Q 019899 81 ITALDQAFNQARKR-GVKVRGILICNP-ANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEA 158 (334)
Q Consensus 81 ~~~l~~~l~~~~~~-~~~~~~i~~~~p-~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~ 158 (334)
++++++++++.... ..++++++++++ +||+|.++|.+++++|.++|+++|+++++|++|...... ........+.
T Consensus 120 ~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~-~~~~~~~~~~-- 196 (353)
T PLN02721 120 LDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASV-ALGVPVHRLV-- 196 (353)
T ss_pred HHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchh-hhCCCHHHHh--
Confidence 99999999742111 136888999886 789999999999999999999999999999997532210 0011111111
Q ss_pred cccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccC--CChHHHHHHHHhhCChHHHHHHHHHHHHHHH
Q 019899 159 EEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCS--ISAPTQRLLISMLSDTKFIQEYLETNKRRIK 236 (334)
Q Consensus 159 ~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 236 (334)
.+...++.|+||+++. +.|+++..++++++.+......++ .+...+.++..+.. ++++..+++ +..
T Consensus 197 ----~~~d~~~~s~sK~l~~---~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~~~~~-~~~ 264 (353)
T PLN02721 197 ----KAADSVSVCLSKGLGA---PVGSVIVGSKSFIRKAKRLRKTLGGGMRQVGVLAAAALVA----LQENVPKLE-DDH 264 (353)
T ss_pred ----hhCCEEEEecccccCC---ceeeEEecCHHHHHhHHHHHHhcCCCeehhHHHHHHHHHH----HHHHHHHHH-HHH
Confidence 2333456689999863 356643348888888776554432 22222222222211 123333332 335
Q ss_pred HHHHHHHHHHHhC-CCcc-cCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEec-C
Q 019899 237 KLYDSFVAGLKQL-GIRC-SESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFT-S 313 (334)
Q Consensus 237 ~~~~~~~~~l~~~-g~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~-~ 313 (334)
++++++.+.|+++ +++. ..+..+.++|++++.... .+..++.+.|. ++||.+.|+. ++++|++++ .
T Consensus 265 ~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~L~-~~gi~v~~~~------~~~lR~~~~~~ 333 (353)
T PLN02721 265 KKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGSR----ITAEKLCKSLE-EHGVLLMPGN------SSRIRVVTHHQ 333 (353)
T ss_pred HHHHHHHHHHHhCCCcEEecCCccceEEEEEccCCcc----ccHHHHHHHHH-hCCcEEecCC------CceEEEEecCc
Confidence 6678899999887 6644 333334568888875211 13467888855 6899999874 468999997 3
Q ss_pred CCcccHHHHHHHHHHHHHH
Q 019899 314 LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 314 ~~~~~l~~~l~~l~~~~~~ 332 (334)
.+++++++++++|++++..
T Consensus 334 ~~~~~i~~~~~~l~~~~~~ 352 (353)
T PLN02721 334 ISDSDVQYTLSCFQQAALT 352 (353)
T ss_pred CCHHHHHHHHHHHHHHhhc
Confidence 6999999999999998754
No 136
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.96 E-value=3.7e-28 Score=218.36 Aligned_cols=285 Identities=18% Similarity=0.236 Sum_probs=205.0
Q ss_pred hhhhhcCCCCCC-CCcEEEecCcHHHHHHHHHHhcC---CCCeEEecCCCCCChhh----hhhhccCcEEEEEeCCCCCC
Q 019899 5 MSQVLGQAVSFD-PSQIVLTAGATPAVEILCFCLAD---HGNALLVPSPYYPGFDR----DIRFRTGVELIPVHCRSTDN 76 (334)
Q Consensus 5 ~~~~~~~~~~~~-~~~i~~~~g~~~~~~~~~~~l~~---~gd~vl~~~p~~~~~~~----~~~~~~g~~v~~v~~~~~~~ 76 (334)
+++.+++.++.+ ++++++|+|++++++.++.++.. +||+|++++++|++... ..+ ..|.+++.++++ ++
T Consensus 48 ~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~--~~ 124 (373)
T cd06453 48 AREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAE-RTGAKLKVVPVD--DD 124 (373)
T ss_pred HHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHh-hcCcEEEEeecC--CC
Confidence 344555556666 77999999999999999999876 89999999999998533 333 579999999984 45
Q ss_pred ccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhh
Q 019899 77 FAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEIL 156 (334)
Q Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~ 156 (334)
+.+|++++++++++ +++++++++|+||||.+.| +++|.++|+++|+++++|++|+.... ..++..
T Consensus 125 ~~~d~~~l~~~l~~------~~~~v~~~~~~~~tG~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~----~~~~~~-- 189 (373)
T cd06453 125 GQLDLEALEKLLTE------RTKLVAVTHVSNVLGTINP---VKEIGEIAHEAGVPVLVDGAQSAGHM----PVDVQD-- 189 (373)
T ss_pred CCcCHHHHHHHhcC------CceEEEEeCcccccCCcCC---HHHHHHHHHHcCCEEEEEhhhhcCce----eeeccc--
Confidence 67999999999976 7899999999999999999 88999999999999999999874221 111111
Q ss_pred hccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc-----------------------cCCChHHHHH
Q 019899 157 EAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF-----------------------CSISAPTQRL 213 (334)
Q Consensus 157 ~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~ 213 (334)
.+.++++.|++|+++. .++|++++ ++++.+.++..... .+.+.....+
T Consensus 190 ------~~~d~~~~s~~K~~~~--~g~g~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a 260 (373)
T cd06453 190 ------LGCDFLAFSGHKMLGP--TGIGVLYG-KEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIG 260 (373)
T ss_pred ------cCCCEEEeccccccCC--CCcEEEEE-chHHhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHH
Confidence 3456777899999974 56899998 77777766532210 1233334444
Q ss_pred HHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCC--ceeEEeeecCCcCCCCChhhHHHHHHHHHHhcC
Q 019899 214 LISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSESS--AGLYCWADMSGLIPSYSEKGELELWDKLLNIAK 290 (334)
Q Consensus 214 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g 290 (334)
+..+++... +..+++++++..+.++++.+.|+++ ++++..+. .+.++++.++.. +..++.+.| +++|
T Consensus 261 l~~al~~l~--~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~i~~~l-~~~g 330 (373)
T cd06453 261 LGAAIDYLE--KIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNLEGI-------HPHDVATIL-DQYG 330 (373)
T ss_pred HHHHHHHHH--HcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEECCc-------CHHHHHHHH-HHCC
Confidence 444443211 2234566777788889999999887 57765321 233555666532 345777774 5589
Q ss_pred eEEcCCCCcCC------CCCCeEEEEecC-CCcccHHHHHHHH
Q 019899 291 INVTPGSACHC------IEPGWFRCCFTS-LTHEDIPLVIERI 326 (334)
Q Consensus 291 i~v~~g~~~~~------~~~~~iRi~~~~-~~~~~l~~~l~~l 326 (334)
|.+.+|..|.. ..++++|++++. .|++|++++++.|
T Consensus 331 i~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 331 IAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred EEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 99988775432 135789999996 5999999998864
No 137
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.96 E-value=1.2e-27 Score=216.17 Aligned_cols=288 Identities=17% Similarity=0.170 Sum_probs=202.9
Q ss_pred hhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHH
Q 019899 6 SQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALD 85 (334)
Q Consensus 6 ~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~ 85 (334)
++.+++.++ .++.++++++++++..++..++++||.|++++|+|+.+...+. ..|.+++.++. .|++.++
T Consensus 90 ~~~la~~~~--~~~~i~~~~g~~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~~~-~~g~~~~~~~~-------~d~~~l~ 159 (385)
T PRK05958 90 EEELAEWFG--AERALLFSSGYAANLAVLTALAGKGDLIVSDKLNHASLIDGAR-LSRARVRRYPH-------NDVDALE 159 (385)
T ss_pred HHHHHHHhC--CCcEEEECcHHHHHHHHHHHhCCCCCEEEEeCccCHHHHHHHH-hcCCceEEeCC-------CCHHHHH
Confidence 334444443 2455555566677777778889999999999999999998888 88999888874 3788999
Q ss_pred HHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccC--CCCcchhhhhhhccccCC
Q 019899 86 QAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFG--NEEFVSMAEILEAEEVDK 163 (334)
Q Consensus 86 ~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 163 (334)
+.+++. ..++.++++.+++||+|...+ +++|.++|++||+++|+||+|+.+.++ +........+.. .
T Consensus 160 ~~i~~~---~~~~~lvi~~~~~~~~G~~~~---l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~-----~ 228 (385)
T PRK05958 160 ALLAKW---RAGRALIVTESVFSMDGDLAP---LAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAG-----E 228 (385)
T ss_pred HHHHhc---cCCCeEEEEEecccCCCCcCC---HHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCC-----C
Confidence 988752 013455566667899999988 999999999999999999999775553 222222112221 4
Q ss_pred CcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc----cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHH
Q 019899 164 DRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF----CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLY 239 (334)
Q Consensus 164 ~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (334)
++++++.|+||+++++| ||+++ ++++.+.+...... .+.++....++..+++.. +.. .++.+++.+++
T Consensus 229 ~~~i~~~s~sK~~~~~G---g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~---~~~-~~~~~~~~~~~ 300 (385)
T PRK05958 229 PDVILVGTLGKALGSSG---AAVLG-SETLIDYLINRARPFIFTTALPPAQAAAARAALRIL---RRE-PERRERLAALI 300 (385)
T ss_pred CceEEEEechhhcccCC---cEEEc-CHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHH---hcC-HHHHHHHHHHH
Confidence 67789999999998666 89887 78888777543222 123444444444554332 111 35667888899
Q ss_pred HHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcC-CCCCCeEEEEecC-CCcc
Q 019899 240 DSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACH-CIEPGWFRCCFTS-LTHE 317 (334)
Q Consensus 240 ~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~~~iRi~~~~-~~~~ 317 (334)
+++.+.|++.++++..+.++ ++|+.++.. .++.++.+.|. ++||.+.++..+. ...++++|++++. .+++
T Consensus 301 ~~l~~~L~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~~l~-~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~ 372 (385)
T PRK05958 301 ARLRAGLRALGFQLMDSQSA-IQPLIVGDN------ERALALAAALQ-EQGFWVGAIRPPTVPAGTSRLRITLTAAHTEA 372 (385)
T ss_pred HHHHHHHHHcCCCcCCCCCC-EEEEEeCCH------HHHHHHHHHHH-HCCceEecccCCCCCCCCceEEEEecCCCCHH
Confidence 99999999888887666554 566777542 24467888865 5799998755432 2234789999984 5999
Q ss_pred cHHHHHHHHHHHH
Q 019899 318 DIPLVIERIQKVA 330 (334)
Q Consensus 318 ~l~~~l~~l~~~~ 330 (334)
++++++++|++++
T Consensus 373 ~i~~~l~~l~~~~ 385 (385)
T PRK05958 373 DIDRLLEALAEAL 385 (385)
T ss_pred HHHHHHHHHHhcC
Confidence 9999999998753
No 138
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.96 E-value=7.2e-28 Score=213.71 Aligned_cols=289 Identities=15% Similarity=0.116 Sum_probs=200.0
Q ss_pred hhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhh---hhhccCcEEEEEeCCCCCCccccHH
Q 019899 6 SQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRD---IRFRTGVELIPVHCRSTDNFAFSIT 82 (334)
Q Consensus 6 ~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~---~~~~~g~~v~~v~~~~~~~~~~~~~ 82 (334)
++.+++.++ ++++++++|+++++..++.+++++||+|+++.|+|.++... .. ..|.+++.++.+ .+.+|++
T Consensus 38 ~~~~a~~~g--~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~---~~~~d~~ 111 (338)
T cd06502 38 EARAAELFG--KEAALFVPSGTAANQLALAAHTQPGGSVICHETAHIYTDEAGAPEF-LSGVKLLPVPGE---NGKLTPE 111 (338)
T ss_pred HHHHHHHhC--CCeEEEecCchHHHHHHHHHhcCCCCeEEEecCcceeeecCCcHHH-HcCceEEeecCC---CCcCCHH
Confidence 334444444 56788888899999999999999999999999999875542 33 579999999862 2579999
Q ss_pred HHHHHHHHHHH-cCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 83 ALDQAFNQARK-RGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 83 ~l~~~l~~~~~-~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
++++++++... +..+++++++++|+|| |.+++.+++++|+++|+++|+++++|++|..+....... +.....
T Consensus 112 ~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~-~~~~~~----- 184 (338)
T cd06502 112 DLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGV-ALKTYK----- 184 (338)
T ss_pred HHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCC-CHHHHH-----
Confidence 99999874210 1126889999999997 667799999999999999999999999986432211111 222221
Q ss_pred CCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc----cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF----CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
.+..+++.|+||+++++| |+++..++++++.++..... ++.++..+.++...++...+ .+..+++.+
T Consensus 185 -~~~d~~~~s~sK~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~L~~~~~-----~~~~~~~~~ 255 (338)
T cd06502 185 -SGVDSVSFCLSKGGGAPV---GAVVVGNRDFIARARRRRKQAGGGMRQSGFLAAAGLAALENDLW-----LRRLRHDHE 255 (338)
T ss_pred -hcCCEEEEeccccCCCcc---ceEEECCHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHhcCchH-----HHHHHHHHH
Confidence 223356779999998776 44443388888888765432 23455666666666654322 234456777
Q ss_pred HHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHH--HhcCeEEcCCCCcCCCCCCeEEEEecC-C
Q 019899 238 LYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLL--NIAKINVTPGSACHCIEPGWFRCCFTS-L 314 (334)
Q Consensus 238 ~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll--~~~gi~v~~g~~~~~~~~~~iRi~~~~-~ 314 (334)
+++++.+.|+++|+....+.+++.+ ++++.. ......+...+. .++|+.+.+.. .+++|++++. .
T Consensus 256 ~~~~l~~~L~~~~~~~~~~~~~~~~-v~~~~~-----~~~~~~l~~~l~~~~~~gi~~~~~~------~~~lRi~~~~~~ 323 (338)
T cd06502 256 MARRLAEALEELGGLESEVQTNIVL-LDPVEA-----NAVFVELSKEAIERRGEGVLFYAWG------EGGVRFVTHWDT 323 (338)
T ss_pred HHHHHHHHHHhcCCCcccccCCeEE-EecCCc-----cHHHHHHHHHHHHhhhCCEEEEecC------CCeEEEEeecCC
Confidence 7889999999988866666656543 454421 011123333322 14798887642 2689999986 4
Q ss_pred CcccHHHHHHHHHH
Q 019899 315 THEDIPLVIERIQK 328 (334)
Q Consensus 315 ~~~~l~~~l~~l~~ 328 (334)
+++|++++++++++
T Consensus 324 ~~~~i~~~~~~l~~ 337 (338)
T cd06502 324 TEEDVDELLSALKA 337 (338)
T ss_pred CHHHHHHHHHHHhc
Confidence 99999999998865
No 139
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.96 E-value=6.2e-28 Score=218.67 Aligned_cols=287 Identities=13% Similarity=0.155 Sum_probs=203.3
Q ss_pred hhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHh---cCCCCeEEecCCCCCChhhh----hhhccCcEEEEEeCCCCCC
Q 019899 4 FMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCL---ADHGNALLVPSPYYPGFDRD----IRFRTGVELIPVHCRSTDN 76 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l---~~~gd~vl~~~p~~~~~~~~----~~~~~g~~v~~v~~~~~~~ 76 (334)
-+++.+++.+++++++|++++|+++++..++.++ .++||+|++++++|++.... ++ ..|.+++.+++++ ++
T Consensus 64 ~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~-~~g~~~~~~~~~~-~~ 141 (397)
T TIGR01976 64 DAREAVADLLNADPPEVVFGANATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAE-RAGAKVKWARVDE-AT 141 (397)
T ss_pred HHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHH-hcCCEEEEEeccc-cC
Confidence 3455566667777778999999999998887775 67999999999999876533 34 6799999999753 24
Q ss_pred ccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhh
Q 019899 77 FAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEIL 156 (334)
Q Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~ 156 (334)
+.+|++++++++++ +++++++++|+||||.+.| +++|.++|+++|+++++|+++.. +.....+ .
T Consensus 142 ~~~~~~~l~~~i~~------~~~lv~i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~----~~~~~~~---~ 205 (397)
T TIGR01976 142 GELHPDDLASLLSP------RTRLVAVTAASNTLGSIVD---LAAITELVHAAGALVVVDAVHYA----PHGLIDV---Q 205 (397)
T ss_pred CCcCHHHHHHhcCC------CceEEEEeCCCCCCCccCC---HHHHHHHHHHcCCEEEEehhhhc----cccCCCH---H
Confidence 67899999999975 7899999999999999999 99999999999999999999753 2222222 1
Q ss_pred hccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc------------cCCChHHHHHHHHhhCChHH-
Q 019899 157 EAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF------------CSISAPTQRLLISMLSDTKF- 223 (334)
Q Consensus 157 ~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~l~~~~~- 223 (334)
. .+.++++.|++|++| + |+|++++ ++++++.+...... ++.+.....++..+++....
T Consensus 206 ~-----~~~d~~~~s~~K~~g-~--~~G~l~~-~~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~ 276 (397)
T TIGR01976 206 A-----TGADFLTCSAYKFFG-P--HMGILWG-RPELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGL 276 (397)
T ss_pred H-----cCCCEEEEechhhcC-C--ceEEEEE-cHHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHh
Confidence 1 455677789999886 3 5899998 77777666543211 12222333333333321110
Q ss_pred -----------HHHHHHHHHHHHHHHHHHHHHHHHhCC-CcccCC-----CceeEEeeecCCcCCCCChhhHHHHHHHHH
Q 019899 224 -----------IQEYLETNKRRIKKLYDSFVAGLKQLG-IRCSES-----SAGLYCWADMSGLIPSYSEKGELELWDKLL 286 (334)
Q Consensus 224 -----------~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll 286 (334)
+.+.+++.+++..+..+++.+.|++++ +++..+ ..+ ++.+.++.. +..++.++ |
T Consensus 277 g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-------~~~~l~~~-L 347 (397)
T TIGR01976 277 GESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVP-TVSFTVHGL-------PPQRVVRR-L 347 (397)
T ss_pred CcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCc-eEEEEeCCc-------CHHHHHHH-H
Confidence 011246677778888899999998874 776543 334 444555431 23567777 5
Q ss_pred HhcCeEEcCCCCcCC---------CCCCeEEEEecC-CCcccHHHHHHHH
Q 019899 287 NIAKINVTPGSACHC---------IEPGWFRCCFTS-LTHEDIPLVIERI 326 (334)
Q Consensus 287 ~~~gi~v~~g~~~~~---------~~~~~iRi~~~~-~~~~~l~~~l~~l 326 (334)
+++||.+..|..|+. ...+++|+|++. .|++|++++++.|
T Consensus 348 ~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 348 ADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred HHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 668999998866541 134689999986 5899999998864
No 140
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.96 E-value=1.6e-27 Score=216.48 Aligned_cols=295 Identities=16% Similarity=0.140 Sum_probs=206.8
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLA--DHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSIT 82 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~ 82 (334)
+.+.+++.++. ++.+++++| ++++..++..+. .+||.|+++.+.|.++...++ ..|.++..++. .|.+
T Consensus 96 Le~~la~~~g~-~~~i~~~sG-~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~-~~g~~~~~~~~-------~d~~ 165 (410)
T PRK13392 96 LERELADLHGK-ESALLFTSG-YVSNDAALSTLGKLLPGCVILSDALNHASMIEGIR-RSGAEKQVFRH-------NDLA 165 (410)
T ss_pred HHHHHHHHhCC-CCEEEECcH-HHHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHH-HcCCeEEEEeC-------CCHH
Confidence 44445555553 455666655 677877777664 378988888888888888777 78988877652 2556
Q ss_pred HHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccC
Q 019899 83 ALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVD 162 (334)
Q Consensus 83 ~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (334)
.+++.++... ..++++|++++|+||||.+.| +++|.++|+++++++|+||+|+...++... ....... +..
T Consensus 166 ~l~~~l~~~~--~~~t~~v~i~~~~n~tG~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~g-~g~~~~~---~~~ 236 (410)
T PRK13392 166 DLEEQLASVD--PDRPKLIAFESVYSMDGDIAP---IEAICDLADRYNALTYVDEVHAVGLYGARG-GGIAERD---GLM 236 (410)
T ss_pred HHHHHHHhcc--CCCCEEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEECCccccCcCCCC-Cchhhhc---cCC
Confidence 6666665321 136889999999999999999 889999999999999999999955543221 1111111 111
Q ss_pred CCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhccc----CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 163 KDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFC----SISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 163 ~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
...+++++|+||.+|++| ||+++ ++++.+.+++....+ +.++..+.++..+++..+ . ....++++.++
T Consensus 237 ~~~div~~tlsK~~g~~G---G~~~~-~~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~---~-~~~~~~~~~~~ 308 (410)
T PRK13392 237 DRIDMIQGTLAKAFGCLG---GYIAA-SADLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLK---T-SQTERDAHQDR 308 (410)
T ss_pred CCCcEEEEEChHhhhccc---chhhc-CHHHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHh---c-CHHHHHHHHHH
Confidence 223477899999998887 89987 888888887665432 234466666666664322 2 23455778889
Q ss_pred HHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCC-CCCCeEEEEecC-CCc
Q 019899 239 YDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHC-IEPGWFRCCFTS-LTH 316 (334)
Q Consensus 239 ~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-~~~~~iRi~~~~-~~~ 316 (334)
++++.+.|++.|+++..+.++++ .+.++.. ....++.+.|++++||.+.++.+... ....++|++++. .++
T Consensus 309 ~~~l~~~L~~~g~~~~~~~~~~~-~i~~~~~------~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~ 381 (410)
T PRK13392 309 VAALKAKLNANGIPVMPSPSHIV-PVMVGDP------TLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDD 381 (410)
T ss_pred HHHHHHHHHHcCCCCCCCCCCEE-EEEeCCH------HHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCH
Confidence 99999999999988777766654 2333321 13457888877778999998654322 134689999875 599
Q ss_pred ccHHHHHHHHHHHHHHc
Q 019899 317 EDIPLVIERIQKVAETC 333 (334)
Q Consensus 317 ~~l~~~l~~l~~~~~~~ 333 (334)
+|++++++.|.++.++.
T Consensus 382 edid~l~~aL~~~~~~~ 398 (410)
T PRK13392 382 EDIDALVAALVAIWDRL 398 (410)
T ss_pred HHHHHHHHHHHHHHHHc
Confidence 99999999999987753
No 141
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=2.2e-27 Score=211.58 Aligned_cols=292 Identities=18% Similarity=0.232 Sum_probs=221.7
Q ss_pred hhhhhcCCCCCCC-CcEEEecCcHHHHHHHHHHh---cCCCCeEEecCCCCCChhhhhhh---ccCcEEEEEeCCCCCCc
Q 019899 5 MSQVLGQAVSFDP-SQIVLTAGATPAVEILCFCL---ADHGNALLVPSPYYPGFDRDIRF---RTGVELIPVHCRSTDNF 77 (334)
Q Consensus 5 ~~~~~~~~~~~~~-~~i~~~~g~~~~~~~~~~~l---~~~gd~vl~~~p~~~~~~~~~~~---~~g~~v~~v~~~~~~~~ 77 (334)
.|+.+++.+++++ ++|++|+|+|++++.+..++ ..+||+|+++.-.|++..-.++. ..|++++.+|++ ++.
T Consensus 71 aRe~va~~~~a~~~~eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~--~~g 148 (405)
T COG0520 71 AREAVARFLNADSSDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLD--DDG 148 (405)
T ss_pred HHHHHHHHhCCCCCCeEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecC--CCC
Confidence 4556667778885 89999999999999999998 58999999999999987776652 358899999985 556
Q ss_pred cccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhh
Q 019899 78 AFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILE 157 (334)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~ 157 (334)
.++++.+++.+++ ++|+|.+++.+|.||++.| +++|+++|+++|+++++|.+++. +....++..
T Consensus 149 ~~~~~~~~~~i~~------~Tklvais~vSn~tG~~~p---v~~I~~la~~~ga~v~VDaaq~~----~h~~idv~~--- 212 (405)
T COG0520 149 LLDLDALEKLITP------KTKLVALSHVSNVTGTVNP---VKEIAELAHEHGALVLVDAAQAA----GHLPIDVQE--- 212 (405)
T ss_pred CcCHHHHHHhcCC------CceEEEEECccccccccch---HHHHHHHHHHcCCEEEEECcccc----CccCCCchh---
Confidence 8999999998886 8999999999999999999 99999999999999999999875 333444432
Q ss_pred ccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc------------------------ccCCChHHHHH
Q 019899 158 AEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR------------------------FCSISAPTQRL 213 (334)
Q Consensus 158 ~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~ 213 (334)
.+.++++.|.+|++..| ..+|++++ ++++++.+..... .++.+.....+
T Consensus 213 -----l~~Df~afsgHKwl~gP-~GiGvLy~-r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~ 285 (405)
T COG0520 213 -----LGCDFLAFSGHKWLLGP-TGIGVLYV-RKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIG 285 (405)
T ss_pred -----cCCCEEEEcccccccCC-CceEEEEE-chHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHh
Confidence 67889999999966324 34899998 7787777622100 01223334444
Q ss_pred HHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCC---ceeEEeeecCCcCCCCChhhHHHHHHHHHHhc
Q 019899 214 LISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSESS---AGLYCWADMSGLIPSYSEKGELELWDKLLNIA 289 (334)
Q Consensus 214 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 289 (334)
+.++++-.+ +--+.+..++.++..+++.+.|++. ++++..+. .+-.+.+.+++. +..++... |.++
T Consensus 286 l~aAl~~~~--~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~-------~~~dv~~~-L~~~ 355 (405)
T COG0520 286 LAAALDYLL--EIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGI-------HPHDVATL-LDEK 355 (405)
T ss_pred HHHHHHHHH--HHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCC-------CHHHHHHH-HHhC
Confidence 444443322 1224677888888999999999987 68887654 344455666654 34677888 5667
Q ss_pred CeEEcCCCCcCCC------CCCeEEEEecC-CCcccHHHHHHHHHHHHH
Q 019899 290 KINVTPGSACHCI------EPGWFRCCFTS-LTHEDIPLVIERIQKVAE 331 (334)
Q Consensus 290 gi~v~~g~~~~~~------~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~ 331 (334)
||.++.|..|... .++.+|+|++. .|++|++++++.|+++.+
T Consensus 356 gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 356 GIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred CeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 8999999888542 23459999995 599999999999998764
No 142
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.96 E-value=1.3e-27 Score=215.22 Aligned_cols=285 Identities=18% Similarity=0.203 Sum_probs=205.4
Q ss_pred CCC-CCCcEEEecCcHHHHHHHHHHhc-----CC-CCeEEecCCCCCChhhhhh--hccCcEEEEEeCCCCCCccccHHH
Q 019899 13 VSF-DPSQIVLTAGATPAVEILCFCLA-----DH-GNALLVPSPYYPGFDRDIR--FRTGVELIPVHCRSTDNFAFSITA 83 (334)
Q Consensus 13 ~~~-~~~~i~~~~g~~~~~~~~~~~l~-----~~-gd~vl~~~p~~~~~~~~~~--~~~g~~v~~v~~~~~~~~~~~~~~ 83 (334)
+++ ++++|++|+|++++++.++.++. ++ +++|+++.+.|+++...+. ...|.+++.+|++ +++.+|+++
T Consensus 55 ~~~~~~~~i~~t~g~teal~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~--~~g~~d~~~ 132 (382)
T TIGR03403 55 INARDLDDIIITSCATESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPIN--EQGTITAEQ 132 (382)
T ss_pred cCcCCCCeEEEeCCHHHHHHHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecC--CCCCCCHHH
Confidence 444 67899999999999999998762 44 5789999888877665532 1579999999984 345789999
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCC
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDK 163 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (334)
+++++++ +++++++++|+||||.++| +++|.++|+++|+++++|++++. +....++. . .
T Consensus 133 l~~~i~~------~t~lv~~~~~~n~tG~~~~---~~~I~~la~~~g~~~ivD~a~~~----g~~~~~~~---~-----~ 191 (382)
T TIGR03403 133 VREAITE------KTALVSVMWANNETGMIFP---IKEIGEICKERGVLFHTDAVQAI----GKIPVDVQ---K-----A 191 (382)
T ss_pred HHHhccc------CCeEEEEEcccCCCccccC---HHHHHHHHHHcCCEEEEechhhc----CCCccCcc---c-----c
Confidence 9999876 7899999999999999999 88899999999999999999764 21112221 1 4
Q ss_pred CcEEEEecccccCCCCCceEEEEeecCHH-HHHHHH-----HhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 164 DRVHIIYGLSKDLSLPGFRTGVIYSYNES-VLAAAK-----KLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 164 ~~~~~~~s~sK~~~~~g~r~g~i~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
+.++++.|++|++|++| +|+++.++.. +...+. .....++.+.+.+.++..+++. ..+.++...+++++
T Consensus 192 ~~D~~~~s~~K~~gp~G--~g~l~vr~~~~~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~---~~~~~~~~~~~~~~ 266 (382)
T TIGR03403 192 GVDFLSFSAHKFHGPKG--VGGLYIRKGVELTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRL---ANEYLDFEKSHVRR 266 (382)
T ss_pred CCCEEEEcchhhCCCCc--eEEEEECCCCCCCCcccCCCCCCCcccCCcChHHHHHHHHHHHH---HHHhHHHHHHHHHH
Confidence 55688899999888677 5777763221 111110 0122356777777777777743 23445667788999
Q ss_pred HHHHHHHHHHhC-CCcccCCCc---eeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC-----------
Q 019899 238 LYDSFVAGLKQL-GIRCSESSA---GLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI----------- 302 (334)
Q Consensus 238 ~~~~~~~~l~~~-g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~----------- 302 (334)
.++++.+.|+++ ++++..+.. +.++.+.++.. +..++... |.++||.++.|+.|...
T Consensus 267 l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~-L~~~gI~v~~g~~c~~~~~~~~~v~~~~ 338 (382)
T TIGR03403 267 LRDRLEDALLELPDVFVVGDREHRVPNTILISIKGV-------EGEAMLWD-LNKAGIAASTGSACASEDLEANPVMVAI 338 (382)
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeCCC-------CHHHHHHh-hccCCEEEEchhccCCCCCCcCHHHHHc
Confidence 999999999876 677665431 22334555431 23566777 56789999988766311
Q ss_pred ------CCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 303 ------EPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 303 ------~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
..+.+|+|+++ .|++|++++++.|++++++.
T Consensus 339 g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~ 376 (382)
T TIGR03403 339 GADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRL 376 (382)
T ss_pred CCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 12579999996 69999999999999988764
No 143
>PRK07179 hypothetical protein; Provisional
Probab=99.96 E-value=4.5e-27 Score=213.26 Aligned_cols=290 Identities=17% Similarity=0.149 Sum_probs=202.4
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITAL 84 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l 84 (334)
+.+.+++.++. +.+++++|+++|+..++.++..+||.|+++.+.|.+....+. ..|.+++.++ ..|++++
T Consensus 104 le~~la~~~g~--~~~~~~~sG~~An~~~l~~l~~~g~~v~~~~~~h~s~~~~~~-~~g~~~~~~~-------~~d~~~l 173 (407)
T PRK07179 104 FEKKLAAFTGF--ESCLLCQSGWAANVGLLQTIADPNTPVYIDFFAHMSLWEGVR-AAGAQAHPFR-------HNDVDHL 173 (407)
T ss_pred HHHHHHHHhCC--CcEEEECCHHHHHHHHHHHhCCCCCEEEEECCcCHHHHHHHH-HCCCeEEEec-------CCCHHHH
Confidence 34445544443 567889999999999999999999999999999999988887 7888877665 2589999
Q ss_pred HHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCC
Q 019899 85 DQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKD 164 (334)
Q Consensus 85 ~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (334)
++++++. ++++|++++++||||.+.| +++|.++|+++|+++|+||+|+...++..+...+..+. ....
T Consensus 174 ~~~l~~~-----~~~lV~v~~v~n~tG~i~p---l~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~----~~~~ 241 (407)
T PRK07179 174 RRQIERH-----GPGIIVVDSVYSTTGTIAP---LADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELG----LTSR 241 (407)
T ss_pred HHHHHhc-----CCeEEEECCCCCCCCcccc---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcC----CCCC
Confidence 9999752 4778888889999999999 88999999999999999999986544322111121211 1123
Q ss_pred cEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc--cCC--ChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 019899 165 RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--CSI--SAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYD 240 (334)
Q Consensus 165 ~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (334)
.++++.|+||++| + |+|++++ ++++++.+...... ++. ++....++..+++. +. .....+++++++++
T Consensus 242 vdi~~~S~sK~~g-~--~~G~l~~-~~~~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~---~~-~~~~~~~~l~~~~~ 313 (407)
T PRK07179 242 VHFITASLAKAFA-G--RAGIITC-PRELAEYVPFVSYPAIFSSTLLPHEIAGLEATLEV---IE-SADDRRARLHANAR 313 (407)
T ss_pred CCEEEeechHhhh-c--cCeEEEe-CHHHHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHH---Hh-cCHHHHHHHHHHHH
Confidence 3578899999997 3 5899998 77887777654322 222 22222233333322 11 12456788999999
Q ss_pred HHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCC-cCCCCCCeEEEEecC-CCccc
Q 019899 241 SFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSA-CHCIEPGWFRCCFTS-LTHED 318 (334)
Q Consensus 241 ~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~-~~~~~~~~iRi~~~~-~~~~~ 318 (334)
++.+.|+++|+++. +. +.++++.++.. .+...+.+. +.++||.+..-.. .....++++||+++. .|++|
T Consensus 314 ~l~~~L~~~g~~v~-~~-~~i~~l~~~~~------~~~~~~~~~-L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~ed 384 (407)
T PRK07179 314 FLREGLSELGYNIR-SE-SQIIALETGSE------RNTEVLRDA-LEERNVFGAVFCAPATPKNRNLIRLSLNADLTASD 384 (407)
T ss_pred HHHHHHHHcCCCCC-CC-CCEEEEEeCCH------HHHHHHHHH-HHHCCceEeeecCCCCCCCCceEEEEECCCCCHHH
Confidence 99999999888766 33 34556665431 123345555 5668997431100 011125789999985 69999
Q ss_pred HHHHHHHHHHHHHHc
Q 019899 319 IPLVIERIQKVAETC 333 (334)
Q Consensus 319 l~~~l~~l~~~~~~~ 333 (334)
++++++.|++++++.
T Consensus 385 i~~~~~~l~~~~~~~ 399 (407)
T PRK07179 385 LDRVLEVCREARDEV 399 (407)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999998764
No 144
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.96 E-value=2.6e-27 Score=212.77 Aligned_cols=292 Identities=20% Similarity=0.180 Sum_probs=208.7
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcC----CCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcccc
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLAD----HGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~----~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
+++.+++.++++++++++++|+++++..++.++.+ ++|+|+++++.|+++...++ ..|.+++.+|.+ +++.+|
T Consensus 64 ~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~~~~~-~~g~~~~~v~~~--~~~~~d 140 (371)
T PRK13520 64 AVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFDKAAD-MLGVELRRAPLD--DDYRVD 140 (371)
T ss_pred HHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHHHHHH-HcCceEEEecCC--CCCcCC
Confidence 44445555666777889999999999998877643 57899999999999988887 889999999873 456789
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++ +++++++++++|+||.+.| +++|.++|+++|+++++|++|+.+..+-...........
T Consensus 141 ~~~l~~~i~~------~~~~vi~~~~~~~tG~~~~---l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~--- 208 (371)
T PRK13520 141 VKAVEDLIDD------NTIGIVGIAGTTELGQVDP---IPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSL--- 208 (371)
T ss_pred HHHHHHHHhh------CCEEEEEEcCCcCCcccCC---HHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccC---
Confidence 9999999986 6777888888999999999 999999999999999999999865421000000000100
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc----------cCCChHHHHHHHHhhCChHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF----------CSISAPTQRLLISMLSDTKFIQEYLET 230 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~l~~~~~~~~~~~~ 230 (334)
.+.+.+..|.+|+. .+|.++|+++..++++.+.+.....+ ++.+.....++..+++... ++.+.+
T Consensus 209 --~~vd~~~~s~~K~~-~a~~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~--~~g~~~ 283 (371)
T PRK13520 209 --PGVDSITIDPHKMG-LAPIPAGGILFRDESYLDALAVDTPYLTSKKQATLTGTRSGAGVAATYAVMKYLG--REGYRK 283 (371)
T ss_pred --CCCceEEECCcccc-CccCCceEEEEcCHHHHHhhcccCccccCCCCcceEeeccChHHHHHHHHHhhhc--HhHHHH
Confidence 34455666888954 46788998887677777766422111 1123344444555554321 233466
Q ss_pred HHHHHHHHHHHHHHHHHhCCCc-ccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEE
Q 019899 231 NKRRIKKLYDSFVAGLKQLGIR-CSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRC 309 (334)
Q Consensus 231 ~~~~~~~~~~~~~~~l~~~g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi 309 (334)
+.++..++++++.+.|++.|++ +..+..++ +.++++. ..++.+.|. ++||.+.++. .++++|+
T Consensus 284 ~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~-v~~~~~~---------~~~v~~~L~-~~gi~v~~~~-----~~~~iRi 347 (371)
T PRK13520 284 VVERCMENTRWLAEELKERGFEPVIEPVLNI-VAFDDPN---------PDEVREKLR-ERGWRVSVTR-----CPEALRI 347 (371)
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEecCCCceE-EEEecCC---------HHHHHHHHH-HCCceeccCC-----CCCEEEE
Confidence 7788889999999999988887 55555554 4456552 357777754 4799987643 2468999
Q ss_pred EecC-CCcccHHHHHHHHHHHHHH
Q 019899 310 CFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 310 ~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
++++ .+++|++++++.|++++++
T Consensus 348 s~~~~~t~edi~~~~~~l~~~~~~ 371 (371)
T PRK13520 348 VCMPHVTREHIENFLEDLKEVKKR 371 (371)
T ss_pred EEECCCCHHHHHHHHHHHHHHhhC
Confidence 9875 5899999999999988764
No 145
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.96 E-value=1.8e-27 Score=214.28 Aligned_cols=290 Identities=17% Similarity=0.197 Sum_probs=206.9
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc---CCCCeEEecCCCCCChhhhhhh--ccCcEEEEEeCCCCCCccc
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLA---DHGNALLVPSPYYPGFDRDIRF--RTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~---~~gd~vl~~~p~~~~~~~~~~~--~~g~~v~~v~~~~~~~~~~ 79 (334)
+++.+++.+++++++|++|+|++++++.++.++. .++|+|+++..+|+++...+.. ..|.+++.++++ .++.+
T Consensus 47 ~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~--~~g~~ 124 (379)
T TIGR03402 47 AREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVD--EEGRL 124 (379)
T ss_pred HHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccC--CCCcC
Confidence 4455666777888999999999999999988763 4578999999899877654431 369999999874 34579
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
|++++++++++ +++++++++++||||.++| +++|.++|+++|+++++|++++. +....++..
T Consensus 125 ~~~~l~~~i~~------~~~lv~i~~~~n~tG~~~~---~~~I~~l~~~~g~~vivD~~~~~----g~~~~~~~~----- 186 (379)
T TIGR03402 125 DLEELRAAITD------DTALVSVMWANNETGTIFP---IEEIGEIAKERGALFHTDAVQAV----GKIPIDLKE----- 186 (379)
T ss_pred CHHHHHHhcCC------CcEEEEEEcccCCeeeccc---HHHHHHHHHHcCCEEEEECcccc----cccccCccc-----
Confidence 99999999975 7899999999999999999 78899999999999999999874 222222221
Q ss_pred ccCCCcEEEEecccccCCCCCceEEEEeecCHHHH--HHH-----HHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHH
Q 019899 160 EVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVL--AAA-----KKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNK 232 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~--~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 232 (334)
.+.++++.|.+|.+|++| +|+++.++ +.. ..+ ......++.+.....++..+++. ..+++++..
T Consensus 187 ---~~~D~~~~s~~K~~gp~G--~g~l~v~~-~~~~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~---~~~~~~~~~ 257 (379)
T TIGR03402 187 ---MNIDMLSLSGHKLHGPKG--VGALYIRK-GTRFRPLLRGGHQERGRRAGTENVPGIVGLGKAAEL---ATEHLEEEN 257 (379)
T ss_pred ---CCCCEEEEcHHHcCCCCc--eEEEEECC-CCCCCCcccCCccCCCcCCCCccHHHHHHHHHHHHH---HHHhHHHHH
Confidence 456678889999666555 67777633 221 001 00012234555555655555533 344566777
Q ss_pred HHHHHHHHHHHHHHHh-C-CCcccCCC-----ceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC---
Q 019899 233 RRIKKLYDSFVAGLKQ-L-GIRCSESS-----AGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI--- 302 (334)
Q Consensus 233 ~~~~~~~~~~~~~l~~-~-g~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~--- 302 (334)
++.+++++++.+.|.+ . ++++..+. +...+|+..+ +..++... ++++||.+.+|..|...
T Consensus 258 ~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~-l~~~gI~v~~g~~c~~~~~~ 327 (379)
T TIGR03402 258 TRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFEYI---------EGEAILLL-LDMEGICASSGSACTSGSLE 327 (379)
T ss_pred HHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecCC---------CHHHHHHh-hccCCEEEEchhhcCCCCCC
Confidence 8888888999998875 4 55555432 1233343321 23567776 57789999999877543
Q ss_pred --------------CCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 303 --------------EPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 303 --------------~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
..+.+|+|++. .|++|++++++.|+++++++
T Consensus 328 ~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~ 373 (379)
T TIGR03402 328 PSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARL 373 (379)
T ss_pred cCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 13689999996 69999999999999988764
No 146
>PRK10534 L-threonine aldolase; Provisional
Probab=99.96 E-value=1.5e-27 Score=211.00 Aligned_cols=286 Identities=13% Similarity=0.137 Sum_probs=194.0
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhh--hhhccC-cEEEEEeCCCCCCccccH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRD--IRFRTG-VELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~--~~~~~g-~~v~~v~~~~~~~~~~~~ 81 (334)
+++.+++.+++ +.+++++|+++++.+++.+++.+||+|+++.|+|...... .. ..+ .+++.+++ +.++.+|+
T Consensus 39 L~~~la~~~g~--~~~~v~~~g~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~d~ 113 (333)
T PRK10534 39 LQDYAAELSGK--EAALFLPTGTQANLVALLSHCERGEEYIVGQAAHNYLYEAGGAA-VLGSIQPQPIDA--AADGTLPL 113 (333)
T ss_pred HHHHHHHHhCC--CeEEEeCchHHHHHHHHHHhcCCCCeeEEechhhhhHhcCCchH-HhcCceEEeecC--CCCCCCCH
Confidence 45555655554 4456888888889888888899999999998888542322 23 333 67777776 34678999
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
+++++++++...+..++++|++++|+ +|.+++.+++++|+++|++++++|++||+|....... .......+.. .
T Consensus 114 ~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~-~~~~~~~~~~---~ 187 (333)
T PRK10534 114 DKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVA-YGCELKEITQ---Y 187 (333)
T ss_pred HHHHHhhcccCcCcccceEEEEecCC--CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHH-cCCCHHHHHh---c
Confidence 99999886421111257899999766 5999999999999999999999999999976321100 0012222211 0
Q ss_pred CCCcEEEEecccccCCCCCceEE-EEeecCHHHHHHHHHhhcccCC----ChHHHHHHHHhhCChHHHHHHHHHHHHHHH
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTG-VIYSYNESVLAAAKKLTRFCSI----SAPTQRLLISMLSDTKFIQEYLETNKRRIK 236 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g-~i~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 236 (334)
.+++ +.||||.++++ +| |+++ ++++++.+++....++. +.+.+.+....++. . .+..++..
T Consensus 188 -~~~~--~~s~SK~~~~~---~G~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~------~-~~~~~~~~ 253 (333)
T PRK10534 188 -CDSF--TICLSKGLGTP---VGSLLVG-NRDYIKRARRWRKMTGGGMRQAGILAAAGLYALKH------N-VARLQEDH 253 (333)
T ss_pred -CCEE--EEEeEcCCCCc---ccceEEc-CHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHh------h-HHHHHHHH
Confidence 1222 34899988754 67 5776 89999999876654432 22334443333321 1 12222344
Q ss_pred HHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-CC
Q 019899 237 KLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS-LT 315 (334)
Q Consensus 237 ~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~ 315 (334)
++++++.+.|++.|+++..+ .++|+|++++.. +..++.+ +++++||.+.|+. ++|++.+. ++
T Consensus 254 ~~r~~l~~~L~~~g~~~~~~-~~nfv~~~~~~~-------~~~~~~~-~l~~~gi~v~~~~--------~~rl~~~~r~t 316 (333)
T PRK10534 254 DNAAWLAEQLREAGADVMRQ-DTNMLFVRVGEE-------QAAALGE-YMRERNVLINASP--------IVRLVTHLDVS 316 (333)
T ss_pred HHHHHHHHHHHhCCCccCCC-CceEEEEECCch-------hHHHHHH-HHHHcCeeecCCc--------eEEEEEEeCCC
Confidence 56789999999999988776 577888988731 2345654 4777899998863 47887753 69
Q ss_pred cccHHHHHHHHHHHHHH
Q 019899 316 HEDIPLVIERIQKVAET 332 (334)
Q Consensus 316 ~~~l~~~l~~l~~~~~~ 332 (334)
++++++++++|++++.+
T Consensus 317 ~e~~~~~~~~l~~~~~~ 333 (333)
T PRK10534 317 REQLAEVVAHWRAFLAR 333 (333)
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 99999999999988753
No 147
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.96 E-value=4.6e-27 Score=211.27 Aligned_cols=291 Identities=16% Similarity=0.142 Sum_probs=202.7
Q ss_pred hhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc------CCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCc
Q 019899 4 FMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLA------DHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNF 77 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~------~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~ 77 (334)
.+++.+++.++++++++++++|+++++..++.++. ++||+|++++++|.++...++ ..|.+++.++.+ .++
T Consensus 63 ~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~-~~G~~~~~v~~~--~~~ 139 (373)
T TIGR03812 63 EVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAE-MLGLELRYAPLD--EDY 139 (373)
T ss_pred HHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHH-HcCCeEEEEeeC--CCC
Confidence 45566667777888889999999999988876653 467899999999999988888 889999999974 456
Q ss_pred cccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCc-chhhhhh
Q 019899 78 AFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEF-VSMAEIL 156 (334)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~-~~~~~~~ 156 (334)
.+|++++++++++ ++..++++.|+||||.+.| +++|.++|+++|+++++|++|+.+..+-... .....+.
T Consensus 140 ~~d~~~l~~~l~~------~~~~vv~~~~~~~tG~~~~---~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d 210 (373)
T TIGR03812 140 TVDVKDVEDLIDD------NTIGIVGIAGTTELGQIDD---IEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFD 210 (373)
T ss_pred CcCHHHHHHHHhh------CcEEEEEECCCCCCCccCC---HHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCcc
Confidence 7999999999976 4545666668999999999 8899999999999999999997543210000 0000000
Q ss_pred hccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc----------cCCChHHHHHHHHhhCChHHHHH
Q 019899 157 EAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF----------CSISAPTQRLLISMLSDTKFIQE 226 (334)
Q Consensus 157 ~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~l~~~~~~~~ 226 (334)
- . ..+...+..|.+| +++++.+.|+++..++++.+.+.....+ ++.+.....++...++... ++
T Consensus 211 ~--~-~~~~d~~~~s~~K-~~~~~~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~--~~ 284 (373)
T TIGR03812 211 F--S-LPGVQSITIDPHK-MGLSPIPAGGILFRSKSYLKYLSVDAPYLTVKKQATITGTRSGASAAATYAVIKYLG--RE 284 (373)
T ss_pred c--c-CCCCCEEEECccc-cCCCcCCceEEEEeCHHHHhhhcccCcccCCCCCcceEeechhHHHHHHHHHHHHhC--HH
Confidence 0 0 0233455668889 5556777887665577777766422211 1122334444444443211 34
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcc-cCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCC
Q 019899 227 YLETNKRRIKKLYDSFVAGLKQLGIRC-SESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPG 305 (334)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~l~~~g~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~ 305 (334)
.+++..+++.++++++.+.|++.|+.. ..+..+ ++.+.++. ..++.+.| .++||.+.++. .++
T Consensus 285 g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-~v~~~~~~---------~~~v~~~L-~~~gi~v~~~~-----~~~ 348 (373)
T TIGR03812 285 GYRKIVAECMENTRYLVEELKKIGFEPVIEPVLN-IVAFEVDD---------PEEVRKKL-RDRGWYVSVTR-----CPK 348 (373)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeEEcCCCce-EEEEEeCC---------HHHHHHHH-HHCCceeccCC-----CCC
Confidence 456778889999999999999988753 344344 44455553 24677775 45799987653 256
Q ss_pred eEEEEecC-CCcccHHHHHHHHHH
Q 019899 306 WFRCCFTS-LTHEDIPLVIERIQK 328 (334)
Q Consensus 306 ~iRi~~~~-~~~~~l~~~l~~l~~ 328 (334)
++|++++. .+++|++++++.|++
T Consensus 349 ~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 349 ALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred EEEEEEECCCCHHHHHHHHHHHhh
Confidence 89999986 599999999999975
No 148
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=9.6e-27 Score=196.36 Aligned_cols=280 Identities=20% Similarity=0.246 Sum_probs=216.7
Q ss_pred EEecCcHHHHHHHHHHh--cCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCce
Q 019899 21 VLTAGATPAVEILCFCL--ADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKV 98 (334)
Q Consensus 21 ~~~~g~~~~~~~~~~~l--~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 98 (334)
+=|.|+|.|+.+....+ ..+..+|.+++|+|+++..++. ..|.++.++|..+..+..+|.+.+...|+... .+.
T Consensus 98 ~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~-~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a~---~~~ 173 (396)
T COG1448 98 VQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFE-AAGLEVETYPYYDAETKGLDFDGMLADLKTAP---EGS 173 (396)
T ss_pred eecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHH-hcCCceeeeeccccccccccHHHHHHHHHhCC---CCC
Confidence 44678999998886665 3456679999999999999999 99999999999877777899999999888751 122
Q ss_pred eEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCC-CcchhhhhhhccccCCCcEEEEecccccCC
Q 019899 99 RGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNE-EFVSMAEILEAEEVDKDRVHIIYGLSKDLS 177 (334)
Q Consensus 99 ~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~ 177 (334)
-+++...+|||||.-.+.+++++|+++.++.+++.++|-+|++|.-+-. ....+..+... ....+++.|+||.+|
T Consensus 174 vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~----~~~~lva~S~SKnfg 249 (396)
T COG1448 174 VVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEV----GPELLVASSFSKNFG 249 (396)
T ss_pred EEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHh----CCcEEEEehhhhhhh
Confidence 2233333399999999999999999999999999999999999765422 12223333321 334788999999999
Q ss_pred CCCceEEEEe--ecCHHHHHHHHHh-----hc-ccCCChHHHHHHHHhhCChHHH---HHHHHHHHHHHHHHHHHHHHHH
Q 019899 178 LPGFRTGVIY--SYNESVLAAAKKL-----TR-FCSISAPTQRLLISMLSDTKFI---QEYLETNKRRIKKLYDSFVAGL 246 (334)
Q Consensus 178 ~~g~r~g~i~--~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~l 246 (334)
+.|.|+|.+. +.+.+..+++... +. +.+++.......+..|.+.+.- ++.+..+++++.++++.|.+.|
T Consensus 250 LYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L 329 (396)
T COG1448 250 LYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDAL 329 (396)
T ss_pred hhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999854 4566665555432 33 3456667888888999886543 3346789999999999999999
Q ss_pred HhC----CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHH
Q 019899 247 KQL----GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLV 322 (334)
Q Consensus 247 ~~~----g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~ 322 (334)
++. .|.......|||.+..++ .+-+.+|.+++||++..+. |+|++.+++.+++.+
T Consensus 330 ~~~~~~~~f~~i~~Q~GMFsy~Gls-----------~~QV~rLree~~IY~v~sG----------Ri~vaGl~~~ni~~v 388 (396)
T COG1448 330 KALGAPRNFDFIISQRGMFSYTGLS-----------PEQVDRLREEFGIYLVASG----------RINVAGLNTSNIDYV 388 (396)
T ss_pred HhhCCCcccchHhhcCceeecCCCC-----------HHHHHHHHHhccEEEecCC----------eeeeccCChhhHHHH
Confidence 984 577778888998766444 3677888999999986422 999998999999999
Q ss_pred HHHHHHH
Q 019899 323 IERIQKV 329 (334)
Q Consensus 323 l~~l~~~ 329 (334)
.+.+.++
T Consensus 389 a~ai~~v 395 (396)
T COG1448 389 AKAIAAV 395 (396)
T ss_pred HHHHHhh
Confidence 9998875
No 149
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.96 E-value=4.8e-27 Score=212.67 Aligned_cols=274 Identities=14% Similarity=0.108 Sum_probs=197.1
Q ss_pred CCcEEEecCcHHHHHHHHHHhcCCC-CeEEecCCCCCChhhhhhhccCc------------EEEEEeCCCCCCccccHHH
Q 019899 17 PSQIVLTAGATPAVEILCFCLADHG-NALLVPSPYYPGFDRDIRFRTGV------------ELIPVHCRSTDNFAFSITA 83 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~~~g-d~vl~~~p~~~~~~~~~~~~~g~------------~v~~v~~~~~~~~~~~~~~ 83 (334)
++++++++|+++++..++..+..+| ++|+..+++|+++........|. ++..+|. .|++.
T Consensus 103 ~~~v~~~~sgsea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~ 175 (398)
T PRK03244 103 GGRVFFCNSGAEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-------GDVDA 175 (398)
T ss_pred CCEEEEeCchHHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-------CCHHH
Confidence 4799999999999999998765555 56777778888764332212222 2233331 37888
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHH-HHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccC
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVGNIIPRET-LYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVD 162 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~-l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (334)
+++++++ ++++|+++.++||+|.+.+.++ +++|.++|++||+++|+||+|.++.+.|..+ .+ ... +..
T Consensus 176 l~~~~~~------~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~-~~-~~~---~~~ 244 (398)
T PRK03244 176 LAAAVDD------DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWF-AH-QHD---GVT 244 (398)
T ss_pred HHHhhcC------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHH-hh-hhh---CCC
Confidence 9888853 7888998888999999997765 9999999999999999999998766544322 11 111 111
Q ss_pred CCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHH--hhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 019899 163 KDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKK--LTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYD 240 (334)
Q Consensus 163 ~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (334)
++ +.++||+++ +|+|+|++++ ++++.+.+.. ....++.+++.+.++.++++..+ + ....++++++.+
T Consensus 245 pD----i~t~sK~l~-~G~~ig~~~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~--~---~~~~~~~~~~~~ 313 (398)
T PRK03244 245 PD----VVTLAKGLG-GGLPIGACLA-FGPAADLLTPGLHGSTFGGNPVACAAALAVLDTIA--S---EGLLENAERLGE 313 (398)
T ss_pred CC----EEEEchhhh-CCcccEEEEE-cHHHHhhccCCCCcCCCCCCHHHHHHHHHHHHHHH--h---ccHHHHHHHHHH
Confidence 22 347899998 8999999999 7778887764 34456788999988888875322 1 234456667778
Q ss_pred HHHHHHHhCCCccc--CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcc
Q 019899 241 SFVAGLKQLGIRCS--ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHE 317 (334)
Q Consensus 241 ~~~~~l~~~g~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~ 317 (334)
++.+.|++++.... ....|.++|+.++.. ....+.+.++ ++||.+.|.. .+.+|++++. .+++
T Consensus 314 ~l~~~L~~~~~~~~~~v~g~g~~~~i~~~~~-------~~~~~~~~l~-~~Gv~~~~~~------~~~iR~~p~~~~t~~ 379 (398)
T PRK03244 314 QLRAGIEALGHPLVDHVRGRGLLLGIVLTAP-------VAKAVEAAAR-EAGFLVNAVA------PDVIRLAPPLIITDA 379 (398)
T ss_pred HHHHHHHhcCCCceeeEeeccEEEEEEEecc-------HHHHHHHHHH-HCCeEEeecC------CCEEEEECCCcCCHH
Confidence 88888887654322 223678888988642 2356777754 4899998732 4689999885 6999
Q ss_pred cHHHHHHHHHHHHHHc
Q 019899 318 DIPLVIERIQKVAETC 333 (334)
Q Consensus 318 ~l~~~l~~l~~~~~~~ 333 (334)
|+++++++|.+++++.
T Consensus 380 ~i~~~~~~l~~~l~~~ 395 (398)
T PRK03244 380 QVDAFVAALPAILDAA 395 (398)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999998764
No 150
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.96 E-value=7.1e-27 Score=197.51 Aligned_cols=307 Identities=15% Similarity=0.215 Sum_probs=204.9
Q ss_pred hhhhcCCCCCCCCcEEEecCcHHHHHH--HHHHh----cC--------CCCeEEecCCCCCChhhhhhhccCcEEEEEeC
Q 019899 6 SQVLGQAVSFDPSQIVLTAGATPAVEI--LCFCL----AD--------HGNALLVPSPYYPGFDRDIRFRTGVELIPVHC 71 (334)
Q Consensus 6 ~~~~~~~~~~~~~~i~~~~g~~~~~~~--~~~~l----~~--------~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~ 71 (334)
++.++..+++++++|++..+++-.++. +..++ .. +.-++|+|.|.|..+..+++ ..|.+.++||+
T Consensus 75 r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E-~~Giemi~VpM 153 (425)
T PF12897_consen 75 RELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITE-HFGIEMIPVPM 153 (425)
T ss_dssp HHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHH-HCT-EEEEEEE
T ss_pred HHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHH-hhCcEEEecCC
Confidence 444555667899999999888766532 22222 11 12478999999999999999 99999999997
Q ss_pred CCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCC-CCCcccCCCHHHHHHHHHH-HHhcCcEEEEeccccccccCC--C
Q 019899 72 RSTDNFAFSITALDQAFNQARKRGVKVRGILICNP-ANPVGNIIPRETLYELLDF-AREKNIHVISDEIYGGSIFGN--E 147 (334)
Q Consensus 72 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p-~nptG~~~~~~~l~~i~~~-~~~~~~~vi~D~~~~~~~~~~--~ 147 (334)
...+.|++.+++.+.+. ..+|.+|++-- +||||.++|.+.+++++++ ....++.|+.|++|.-..+.. .
T Consensus 154 ---~~dGPDmD~Ve~LV~~D----~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~~~~ 226 (425)
T PF12897_consen 154 ---TEDGPDMDMVEELVAED----PSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYDEEP 226 (425)
T ss_dssp ---ETTEE-HHHHHHHTHTS----TTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSSSSS
T ss_pred ---CCCCCCHHHHHHHHhcC----CccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeecccccc
Confidence 44478999999998642 47887776644 8999999999999999998 456899999999998766522 1
Q ss_pred --CcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc--cCCChHHHHHHHHhhCChH-
Q 019899 148 --EFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--CSISAPTQRLLISMLSDTK- 222 (334)
Q Consensus 148 --~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~- 222 (334)
...++...+.+.+. +++++.+.|.||.. .+|.+++++.+ +++-++.+.+.... .+..-..|.....++.+.+
T Consensus 227 ~~~~~nil~~~~~AGn-pdrv~~F~STSKIT-f~GaGva~~aa-S~~Nl~~~~~~~~~~tIgpdKvNQLRHvrff~d~~g 303 (425)
T PF12897_consen 227 RDALLNILDACAKAGN-PDRVYVFASTSKIT-FPGAGVAFFAA-SEANLAWIKKHLSVQTIGPDKVNQLRHVRFFKDAEG 303 (425)
T ss_dssp ------HHHHHHHTT--TTSEEEEEESTTTS--TTSS-EEEEE--HHHHHHHHHHHHHH-S---HHHHHHHHHHHHSHHT
T ss_pred chhhhHHHHHHHHcCC-CCeEEEEecccccc-cCCcceeeeec-CHHHHHHHHHHhcCceeCccHHHHHHHHHHhcChhh
Confidence 12356666665444 89999999999976 59999999999 77766777665433 4556689999999999877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhC-C-----CcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcC-
Q 019899 223 FIQEYLETNKRRIKKLYDSFVAGLKQL-G-----IRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTP- 295 (334)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~l~~~-g-----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~- 295 (334)
.+++++.+.++.++-+.+.+.+.|++. + .++..|.+|||++++.+.. .+ .-...|.++.||.+.|
T Consensus 304 Gv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~G-------~A-krvV~lakeAGV~LT~A 375 (425)
T PF12897_consen 304 GVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLDG-------TA-KRVVELAKEAGVALTPA 375 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEESTT--------H-HHHHHHHHHTTEE---T
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCCC-------hH-HHHHHHHHHhCceeCCC
Confidence 778888888888888888887777653 3 4788999999999999874 23 4445558889999988
Q ss_pred CCCcCCC---CCCeEEEEecCCCcccHHHHHHHHHHHHH
Q 019899 296 GSACHCI---EPGWFRCCFTSLTHEDIPLVIERIQKVAE 331 (334)
Q Consensus 296 g~~~~~~---~~~~iRi~~~~~~~~~l~~~l~~l~~~~~ 331 (334)
|+.|... .+..|||+.+..+.+|++.+++.+.-.++
T Consensus 376 GAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~cv~ 414 (425)
T PF12897_consen 376 GATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFATCVK 414 (425)
T ss_dssp TTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 7776543 25789999996799999999999887653
No 151
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.96 E-value=6.8e-27 Score=211.78 Aligned_cols=281 Identities=15% Similarity=0.145 Sum_probs=193.2
Q ss_pred CCCcEEEecCcHHHHHHHHHHhcCCC-------CeEEecCCCCCChhhhhhhccCcEEEEEeCCC-CCCc----cccHHH
Q 019899 16 DPSQIVLTAGATPAVEILCFCLADHG-------NALLVPSPYYPGFDRDIRFRTGVELIPVHCRS-TDNF----AFSITA 83 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l~~~g-------d~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~-~~~~----~~~~~~ 83 (334)
..+++++++|+++|+..++..+...+ ++|++..++|..+........+......+..+ ..++ ..|+++
T Consensus 95 ~~~~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 174 (396)
T PRK02627 95 GMDKVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEA 174 (396)
T ss_pred CCCEEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHH
Confidence 35899999999999999998764322 67999999998765443312232221111100 1111 228899
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCcc-cCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccC
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVG-NIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVD 162 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG-~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (334)
+++++++ ++++|+++.++||+| .+++.+.+++|.++|++||+++|+||+|.++.+.+.. ...... +.
T Consensus 175 l~~~i~~------~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~-~~~~~~----~~- 242 (396)
T PRK02627 175 LKAAITD------KTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKL-FAYQHY----GI- 242 (396)
T ss_pred HHHhcCC------CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCce-eeehhc----CC-
Confidence 9998854 789899888899999 6889999999999999999999999999987665532 111111 11
Q ss_pred CCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHH--hhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 019899 163 KDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKK--LTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYD 240 (334)
Q Consensus 163 ~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (334)
..+ +.++||.++ +|+|+||+++ ++++.+.+.. ....++.+++.+.++.++++..+. ++. .++++++.+
T Consensus 243 ~pd---i~t~sK~~~-~G~rig~~~~-~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~-~~~----~~~~~~~~~ 312 (396)
T PRK02627 243 EPD---IMTLAKGLG-GGVPIGAVLA-KEKVADVFTPGDHGSTFGGNPLACAAALAVIEIIEE-EGL----LENAAEVGE 312 (396)
T ss_pred CCC---EEEEcchhh-CCcccEEEEE-cHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhh-ccH----HHHHHHHHH
Confidence 112 347999999 9999999998 7788887764 345567889999998888864321 122 233334444
Q ss_pred HHHHHHHh----CCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-CC
Q 019899 241 SFVAGLKQ----LGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS-LT 315 (334)
Q Consensus 241 ~~~~~l~~----~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~ 315 (334)
++.+.|.+ ++........|.++|++++. +..++...+++ +||.+.|+. .+++|++++. .+
T Consensus 313 ~~~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~--------~~~~~~~~l~~-~Gv~v~~~~------~~~lRi~~~~~~~ 377 (396)
T PRK02627 313 YLRAKLRELLEKYPGIKEVRGLGLMIGIELDR--------PAAEIVKKALE-KGLLINVTG------DNVLRLLPPLIIS 377 (396)
T ss_pred HHHHHHHHHHHhCCCeeeeccCcEEEEEEecC--------cHHHHHHHHHH-CCeEEeecC------CCEEEEECCcccC
Confidence 44444433 32211122357788888732 24678888666 599998864 3679999763 69
Q ss_pred cccHHHHHHHHHHHHHHc
Q 019899 316 HEDIPLVIERIQKVAETC 333 (334)
Q Consensus 316 ~~~l~~~l~~l~~~~~~~ 333 (334)
++++++++++|++++++.
T Consensus 378 ~~~i~~~~~~l~~~l~~~ 395 (396)
T PRK02627 378 KEEIDEAVDRLEEVLKEL 395 (396)
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 999999999999998753
No 152
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.96 E-value=4.6e-27 Score=211.51 Aligned_cols=290 Identities=20% Similarity=0.238 Sum_probs=203.0
Q ss_pred hhhhcCCCCCCC-CcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhh---hccCcEEEEEeCCCCCCccccH
Q 019899 6 SQVLGQAVSFDP-SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIR---FRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 6 ~~~~~~~~~~~~-~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~---~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
++.++..++++. ++|++++|+++++..++.+++++||+|+++.++|+++...+. ...|.+++.++.+ .++.+|+
T Consensus 50 ~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~ 127 (376)
T TIGR01977 50 RQLLAKLFNAPSSAHVVFTNNATTALNIALKGLLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCD--NEGLISP 127 (376)
T ss_pred HHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecC--CCCCcCH
Confidence 344455555554 489999999999999999999999999999999988765332 1459999999874 4567899
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
+++++++++ +++++++++|+||||.++| +++|.++|+++|+++|+|++++.... ...+. .
T Consensus 128 ~~l~~~~~~------~~~~v~~~~~~n~tG~~~~---~~~i~~l~~~~~~~livD~a~~~g~~----~~~~~---~---- 187 (376)
T TIGR01977 128 ERIKRAIKT------NTKLIVVSHASNVTGTILP---IEEIGELAQENGIFFILDAAQTAGVI----PIDMT---E---- 187 (376)
T ss_pred HHHHHhcCC------CCeEEEEECCCCCccccCC---HHHHHHHHHHcCCEEEEEhhhccCcc----CCCch---h----
Confidence 999999965 7899999999999999999 88899999999999999999976332 11211 1
Q ss_pred CCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh------------------hcccCCChHHHHHHHHhhCChHH
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL------------------TRFCSISAPTQRLLISMLSDTKF 223 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~l~~~~~ 223 (334)
.+.++++.|++|+++.|. ..|.++.++......+... ...++.+.....++..+++..
T Consensus 188 -~~~D~~~~s~~K~l~~p~-g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~-- 263 (376)
T TIGR01977 188 -LAIDMLAFTGHKGLLGPQ-GTGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFI-- 263 (376)
T ss_pred -cCCCEEEecccccccCCC-CceEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHH--
Confidence 566788899999985332 3566655343211111100 001233444445555444321
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCC----ceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCC
Q 019899 224 IQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSESS----AGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSA 298 (334)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~ 298 (334)
.+...+...++..++.+++.+.|++. ++++..+. .+..+++.++.. +..++...|.+++||.+.+|..
T Consensus 264 ~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------~~~~~~~~L~~~~gi~v~~g~~ 336 (376)
T TIGR01977 264 EKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVEGI-------DSEEVADILDEKFDIATRTGLH 336 (376)
T ss_pred HHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEECCC-------CHHHHHHHHhccCCEEEEcccc
Confidence 12224567778888999999999875 66665431 133455666532 3357777855555999998876
Q ss_pred cCC--------CCCCeEEEEecC-CCcccHHHHHHHHHH
Q 019899 299 CHC--------IEPGWFRCCFTS-LTHEDIPLVIERIQK 328 (334)
Q Consensus 299 ~~~--------~~~~~iRi~~~~-~~~~~l~~~l~~l~~ 328 (334)
|.. ..++.+|++++. .|++|+++++++|++
T Consensus 337 ~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 337 CAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred cchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 642 245799999885 699999999999975
No 153
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.96 E-value=5.5e-27 Score=201.59 Aligned_cols=293 Identities=20% Similarity=0.242 Sum_probs=222.4
Q ss_pred hhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHh--c----CCCCeEEecCCCCCChhhhhhhcc---CcEEEEEeCCCC
Q 019899 4 FMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCL--A----DHGNALLVPSPYYPGFDRDIRFRT---GVELIPVHCRST 74 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l--~----~~gd~vl~~~p~~~~~~~~~~~~~---g~~v~~v~~~~~ 74 (334)
-.++.+++.+++++++|++|+|+|++++.++... . ++|.+|+++.-.|++....++ .+ |.+|.++|++
T Consensus 48 ~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~-~Le~~g~~Vtyl~V~-- 124 (386)
T COG1104 48 EAREQIAKLLGADPEEIIFTSGATESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCR-YLERQGFEVTYLPVD-- 124 (386)
T ss_pred HHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHH-HHHhcCCeEEEeCCC--
Confidence 3456667778899999999999999999998873 2 257899999999999999888 54 9999999994
Q ss_pred CCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhh
Q 019899 75 DNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAE 154 (334)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~ 154 (334)
.+..+|+++|+++|++ ++.+|-++..||.+|++.| +++|.++|+++++++++|.+++. |+-+.++..
T Consensus 125 ~~G~v~~e~L~~al~~------~T~LVSim~aNnE~G~IQp---I~ei~~i~k~~~i~fHvDAvQa~----Gkipi~~~~ 191 (386)
T COG1104 125 SNGLVDLEQLEEALRP------DTILVSIMHANNETGTIQP---IAEIGEICKERGILFHVDAVQAV----GKIPIDLEE 191 (386)
T ss_pred CCCeEcHHHHHHhcCC------CceEEEEEecccCeeeccc---HHHHHHHHHHcCCeEEEehhhhc----Cceeccccc
Confidence 4668999999999997 8999999999999999999 99999999999999999999876 444444432
Q ss_pred hhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHH-HHH------HHhhcccCCChHHHHHHHHhhCChHHHHHH
Q 019899 155 ILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVL-AAA------KKLTRFCSISAPTQRLLISMLSDTKFIQEY 227 (334)
Q Consensus 155 ~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~-~~~------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 227 (334)
.+.++...|.+|..|+.| +|.++. ++.++ ..+ ++-...++.|.+...++..+++.. .+.
T Consensus 192 --------~~vD~ls~SaHK~~GpkG--iGaLyv-~~~~~~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a---~~~ 257 (386)
T COG1104 192 --------LGVDLLSFSAHKFGGPKG--IGALYV-RPGVRLEPLIHGGGQERGLRSGTENVPGIVGFGKAAEIA---VEE 257 (386)
T ss_pred --------cCcceEEeehhhccCCCc--eEEEEE-CCCCccCceeccCcCCCCCCCCCccHHHHHHHHHHHHHH---HHH
Confidence 244566778999888777 788887 33321 111 111233566777777777777542 444
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC--CCcccC---CCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC
Q 019899 228 LETNKRRIKKLYDSFVAGLKQL--GIRCSE---SSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI 302 (334)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~l~~~--g~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~ 302 (334)
+.....++...++++.+.|.+. .+.+.. +.-+..+.+.+|.. .++.+... |+.+||.+..|+.|.+.
T Consensus 258 ~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv-------~gE~ll~~-L~~~gI~vStGSACsS~ 329 (386)
T COG1104 258 LEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGV-------EGESLLLA-LDLAGIAVSTGSACSSG 329 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCC-------cHHHHHHh-ccccCeEEeccccccCC
Confidence 5667778888999999999875 333322 22233445666654 22445555 88899999999998653
Q ss_pred C-----------------CCeEEEEecC-CCcccHHHHHHHHHHHHHHcC
Q 019899 303 E-----------------PGWFRCCFTS-LTHEDIPLVIERIQKVAETCK 334 (334)
Q Consensus 303 ~-----------------~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~~ 334 (334)
. .+.+|||++. .+++|++.+++.+.++++++|
T Consensus 330 ~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr 379 (386)
T COG1104 330 SLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRLR 379 (386)
T ss_pred CCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 1 2569999997 599999999999999998864
No 154
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.96 E-value=2.3e-26 Score=207.12 Aligned_cols=284 Identities=15% Similarity=0.117 Sum_probs=196.0
Q ss_pred hhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc---C----CCCeEEecCCCCCChhhhhhhccCcEEE----EEeCCCC
Q 019899 6 SQVLGQAVSFDPSQIVLTAGATPAVEILCFCLA---D----HGNALLVPSPYYPGFDRDIRFRTGVELI----PVHCRST 74 (334)
Q Consensus 6 ~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~---~----~gd~vl~~~p~~~~~~~~~~~~~g~~v~----~v~~~~~ 74 (334)
.+.+++.++ .+++++++|+++++..++..+. . ++|+|++++|+|..+..... ..+.... ..++..+
T Consensus 75 ~~~la~~~g--~~~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~-~~~~~~~~~~~~~~~~~~ 151 (379)
T TIGR00707 75 AEKLVEHSG--ADRVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGAL-SATGQPKYQKGFEPLVPG 151 (379)
T ss_pred HHHHHhhCC--CCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHH-HhcCChhhhccCCCCCCC
Confidence 344444444 3599999999999999988652 2 37999999999987766555 3332221 1222111
Q ss_pred CCc--cccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccC-CCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcch
Q 019899 75 DNF--AFSITALDQAFNQARKRGVKVRGILICNPANPVGNI-IPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVS 151 (334)
Q Consensus 75 ~~~--~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~ 151 (334)
..+ ..|++++++.+++ ++++|+++.++||+|.. .+.+++++|.++|+++++++|+||+|.++.+.+.. ..
T Consensus 152 ~~~~~~~d~~~l~~~~~~------~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~-~~ 224 (379)
T TIGR00707 152 FSYAPYNDIESLKKAIDD------ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKF-FA 224 (379)
T ss_pred ceeeCCCCHHHHHHHhhh------CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchh-hh
Confidence 111 1279999998876 78888886557778864 68999999999999999999999999877654432 11
Q ss_pred hhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh--hcccCCChHHHHHHHHhhCChHHHHHHHH
Q 019899 152 MAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL--TRFCSISAPTQRLLISMLSDTKFIQEYLE 229 (334)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 229 (334)
.... . . ..+ +.++||.++ +|+|+||+++ ++++++.+... ...++.+++.+.++.++++..+ . .
T Consensus 225 ~~~~-~---~-~~d---~~t~sK~~~-~G~riG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~---~--~ 289 (379)
T TIGR00707 225 YEHY-G---I-EPD---IITLAKGLG-GGVPIGATLA-KEEVAEAFTPGDHGSTFGGNPLACAAALAVLEVIE---K--E 289 (379)
T ss_pred HHhc-C---C-CCC---EEEEccccc-CCcccEEEEE-cHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHH---h--h
Confidence 1111 1 1 122 236899999 9999999998 78888888753 3456678889988887775321 1 2
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcc---cCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCe
Q 019899 230 TNKRRIKKLYDSFVAGLKQLGIRC---SESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGW 306 (334)
Q Consensus 230 ~~~~~~~~~~~~~~~~l~~~g~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~ 306 (334)
...++++++++.+.+.|++.+... ..+..|.++|++++.. ..++.+. +.++||.+.|+. .++
T Consensus 290 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~-l~~~Gv~v~~~~------~~~ 354 (379)
T TIGR00707 290 RLLENVKEKGDYFKERLEELGKNYPNKEVRGKGLMLGIELEAP--------CKDIVKK-ALEKGLLVNCAG------PKV 354 (379)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhCCCCccccCceEEEEEecCc--------HHHHHHH-HHHCCcEEeeCC------CCE
Confidence 344556666677777666543221 1223577788887642 3567777 556899999853 478
Q ss_pred EEEEecC-CCcccHHHHHHHHHHH
Q 019899 307 FRCCFTS-LTHEDIPLVIERIQKV 329 (334)
Q Consensus 307 iRi~~~~-~~~~~l~~~l~~l~~~ 329 (334)
+|++++. .+++++++++++|+++
T Consensus 355 lRi~~~~~~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 355 LRFLPPLIITKEEIDEAVSALEEA 378 (379)
T ss_pred EEEECCCcCCHHHHHHHHHHHHHh
Confidence 9999874 6999999999999875
No 155
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.96 E-value=3.8e-26 Score=207.00 Aligned_cols=295 Identities=17% Similarity=0.123 Sum_probs=206.8
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcC--CCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLAD--HGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSIT 82 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~ 82 (334)
+.+.+++.++ .+..++++++++++..++..+.. +++.|+.+...|.+....+. ..|.+++.++. .|++
T Consensus 95 Le~~la~~~g--~~~~l~~~sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~-~~g~~~~~~~~-------~d~~ 164 (402)
T TIGR01821 95 LEAELADLHG--KESALVFTSGYVANDATLATLAKIIPGCVIFSDELNHASMIEGIR-HSGAEKFIFRH-------NDVA 164 (402)
T ss_pred HHHHHHHHhC--CCeEEEECchHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHH-HcCCeEEEECC-------CCHH
Confidence 4444555454 24567777778899999888764 67777777677877777777 78887766652 3678
Q ss_pred HHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccC
Q 019899 83 ALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVD 162 (334)
Q Consensus 83 ~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (334)
++++.++... ..++++|++++|+||+|.+.| +++|.++|+++|+++|+||+|+...++... ....... +..
T Consensus 165 ~l~~~l~~~~--~~~~~~v~~e~~~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~g-~g~~~~~---~~~ 235 (402)
T TIGR01821 165 HLEKLLQSVD--PNRPKIIAFESVYSMDGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPRG-GGIAERD---GLM 235 (402)
T ss_pred HHHHHHHhcc--CCCCeEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEeCcccccccCCCC-Cccchhc---cCC
Confidence 8888876421 125788999999999999999 899999999999999999999854443211 1111111 111
Q ss_pred CCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc----cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 163 KDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF----CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 163 ~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
.+.+++++|+||.+|++| ||+++ ++++++.++..... .+.++..+.++.+.++.. ++. ...++++.++
T Consensus 236 ~~~div~~t~sKa~g~~G---G~i~~-~~~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~---~~~-~~~~~~~~~~ 307 (402)
T TIGR01821 236 HRIDIIEGTLAKAFGVVG---GYIAA-SRKLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHL---KES-QDLRRAHQEN 307 (402)
T ss_pred CCCeEEEEechhhhccCC---ceeec-CHHHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHh---hcC-HHHHHHHHHH
Confidence 234678899999998777 89887 88888888764432 235566666666665432 222 3445566788
Q ss_pred HHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC-CCCeEEEEecC-CCc
Q 019899 239 YDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI-EPGWFRCCFTS-LTH 316 (334)
Q Consensus 239 ~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~-~~~~iRi~~~~-~~~ 316 (334)
.+++.+.|++.|+++..+.+++ +.+.++.. ..+.++.+.|++++||.+.+..+.... ..+++|++++. .++
T Consensus 308 ~~~l~~~L~~~g~~~~~~~~~i-~~i~~~~~------~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~ 380 (402)
T TIGR01821 308 VKRLKNLLEALGIPVIPNPSHI-VPVIIGDA------ALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTD 380 (402)
T ss_pred HHHHHHHHHHcCCCcCCCCCCE-EEEEeCCH------HHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCH
Confidence 8999999999888877666554 34444321 234578888777789999875543222 34689999975 599
Q ss_pred ccHHHHHHHHHHHHHHc
Q 019899 317 EDIPLVIERIQKVAETC 333 (334)
Q Consensus 317 ~~l~~~l~~l~~~~~~~ 333 (334)
+|++++++.|++++++.
T Consensus 381 edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 381 KMIDDLVEALLLVWDRL 397 (402)
T ss_pred HHHHHHHHHHHHHHHHc
Confidence 99999999999998764
No 156
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.95 E-value=3.6e-26 Score=207.55 Aligned_cols=295 Identities=17% Similarity=0.132 Sum_probs=203.6
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcC--CCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLAD--HGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSIT 82 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~ 82 (334)
+.+.+++.++ .+..++.+++++++..++..+.. +++.|+.+...|.+....+. ..+.++..++. .|++
T Consensus 96 l~~~la~~~g--~~~~~~~~sG~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~-~~~~~~~~~~~-------~d~~ 165 (407)
T PRK09064 96 LERELADLHG--KEAALVFTSGYVSNDATLSTLAKLIPDCVIFSDELNHASMIEGIR-RSRCEKHIFRH-------NDVA 165 (407)
T ss_pred HHHHHHHHhC--CCcEEEECcHHHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHH-HcCCcEEEECC-------CCHH
Confidence 3444554444 24455555566787777777654 77777777777887777777 77877766652 3788
Q ss_pred HHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccC
Q 019899 83 ALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVD 162 (334)
Q Consensus 83 ~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (334)
++++.++.. ...++++|++++++||+|.+.+ +++|.++|+++|+++|+||+|+...++..+ ..+.... +..
T Consensus 166 ~le~~l~~~--~~~~~~~v~~~~v~s~~G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~g-~g~~~~~---~~~ 236 (407)
T PRK09064 166 HLEELLAAA--DPDRPKLIAFESVYSMDGDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPRG-GGIAERD---GLM 236 (407)
T ss_pred HHHHHHHhc--cCCCCeEEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEEECCCcccccCCCC-CChHHhc---CCC
Confidence 888888632 1126789999999999999999 999999999999999999999854443221 1221211 111
Q ss_pred CCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhccc----CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 163 KDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFC----SISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 163 ~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
...+++++||||.+|+.| ||+++ ++++++.+......+ +.++..+.++.+.++ ++++. ...++++.++
T Consensus 237 ~~~div~~t~sKa~g~~G---G~~~~-~~~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~---~~~~~-~~~~~~~~~~ 308 (407)
T PRK09064 237 DRIDIIEGTLAKAFGVMG---GYIAG-SAALVDAVRSYAPGFIFTTSLPPAIAAAALASIR---HLKES-NEERERHQER 308 (407)
T ss_pred CCCeEEEEecchhhhccC---ceEec-CHHHHHHHHHhCccccccCcCCHHHHHHHHHHHH---HHhcC-HHHHHHHHHH
Confidence 234788899999998777 89988 888888887654332 344444554444443 22222 3346778899
Q ss_pred HHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC-CCCeEEEEecC-CCc
Q 019899 239 YDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI-EPGWFRCCFTS-LTH 316 (334)
Q Consensus 239 ~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~-~~~~iRi~~~~-~~~ 316 (334)
++++.+.|++.|+++..+.+++ +++.++.. ..+.++.+.|++++||.+.+..+.... ..+++|++++. .++
T Consensus 309 ~~~l~~~L~~~g~~~~~~~~~i-v~i~~~~~------~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~ 381 (407)
T PRK09064 309 AAKLKAALDAAGIPVMPNESHI-VPVMVGDP------EKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTD 381 (407)
T ss_pred HHHHHHHHHHcCCCCCCCCCCE-EEEEeCCH------HHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCH
Confidence 9999999999888877665554 45555421 234678888777789999876543221 24689999985 699
Q ss_pred ccHHHHHHHHHHHHHHc
Q 019899 317 EDIPLVIERIQKVAETC 333 (334)
Q Consensus 317 ~~l~~~l~~l~~~~~~~ 333 (334)
+|++++++.|++++++.
T Consensus 382 edi~~l~~~l~~~~~~~ 398 (407)
T PRK09064 382 EMIDHLVEALVEVWARL 398 (407)
T ss_pred HHHHHHHHHHHHHHHHc
Confidence 99999999999988753
No 157
>PRK07049 methionine gamma-lyase; Validated
Probab=99.95 E-value=1.6e-25 Score=202.46 Aligned_cols=289 Identities=17% Similarity=0.206 Sum_probs=196.9
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhh---hccCcEEEEEeCCCCCCccccH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIR---FRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~---~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
+.+.++...+ .+++++++|+++++..++.+++++||+|+++.|+|+.+...+. ...|.+++.++. ..|.
T Consensus 88 Le~~lA~leg--~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~------~~d~ 159 (427)
T PRK07049 88 VEDRLAVYEG--AESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFAD------GLSE 159 (427)
T ss_pred HHHHHHHHhC--CCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeC------CCCH
Confidence 4445554433 5679999999999999999999999999999999999977642 156888777762 2467
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHh---cCcEEEEeccccccccCCCCcchhhhhhhc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFARE---KNIHVISDEIYGGSIFGNEEFVSMAEILEA 158 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~---~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~ 158 (334)
+++++++++... ..++++|++++|+||||.++|.+++.++++.|.. +++++++|++|....+. .+ + .
T Consensus 160 ~~l~~~l~~~~~-~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~----~p---l-~- 229 (427)
T PRK07049 160 AAIGAAAEAAAA-KGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQ----KP---L-E- 229 (427)
T ss_pred HHHHHHHHhhcc-CCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccC----Cc---c-c-
Confidence 888887764311 1268999999999999999998888888877643 78999999998653221 11 1 1
Q ss_pred cccCCCcEEEEecccccCC-CCCceEEEEeecCHHHHHHHHHhhccc--CCChHHHHHHHHhhCChHHHHHHHHHHHHHH
Q 019899 159 EEVDKDRVHIIYGLSKDLS-LPGFRTGVIYSYNESVLAAAKKLTRFC--SISAPTQRLLISMLSDTKFIQEYLETNKRRI 235 (334)
Q Consensus 159 ~~~~~~~~~~~~s~sK~~~-~~g~r~g~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 235 (334)
.+.++++.|+||.++ .+|+|+||+++ ++++.+.++.....+ +.++..+.++...++.. ..+.++.
T Consensus 230 ----~g~divv~S~SK~~gG~~glr~G~vv~-~~~l~~~l~~~~~~~g~~ls~~~a~l~~r~L~tl-------~~R~~~~ 297 (427)
T PRK07049 230 ----HGADLSVYSLTKYVGGHSDLVAGAVLG-RKALIRQVRALRSAIGTQLDPHSCWMLGRSLETL-------VLRMERA 297 (427)
T ss_pred ----cCCCEEEEcCceeecCCCCcEEEEEEC-CHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCChH-------HHHHHHH
Confidence 456788999999998 68999999998 788888888766554 36777777777776542 3334556
Q ss_pred HHHHHHHHHHHHhC-CCccc-CC------------------CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcC
Q 019899 236 KKLYDSFVAGLKQL-GIRCS-ES------------------SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTP 295 (334)
Q Consensus 236 ~~~~~~~~~~l~~~-g~~~~-~~------------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~ 295 (334)
.++++.+.+.|+++ +++.+ -| ..|-.+.+++... .+....+.+. ++-..+.+.-
T Consensus 298 ~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~~s~~~~~~-----~~~~~~f~~~-l~l~~~~~sl 371 (427)
T PRK07049 298 NRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGSTFSFDIKGG-----QAAAFRFLNA-LQIFKLAVSL 371 (427)
T ss_pred HHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCccEEEEEEcCC-----HHHHHHHHHc-CcccEEcccC
Confidence 88888999999886 33211 01 1122344555321 1122333333 2222222222
Q ss_pred CCCcCC---------------------CCCCeEEEEecCCCcccHHHHHHHHHHHHHH
Q 019899 296 GSACHC---------------------IEPGWFRCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 296 g~~~~~---------------------~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
|..... ..++-+|+|++ -|+.+.+++.|.+++++
T Consensus 372 G~~~sli~~~~~~~h~~~~~~~~~~~gi~~~liR~svG---lE~~~dl~~dl~~al~~ 426 (427)
T PRK07049 372 GGTESLASHPASMTHSGVPADVRERIGVLESTIRLSIG---IEHPDDLIADLAQALDA 426 (427)
T ss_pred CCCCceeeCCCccccccCCHHHHHhcCCCcCeEEEEeC---cCCHHHHHHHHHHHHhc
Confidence 222100 01356999999 77888999999998864
No 158
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.95 E-value=2.8e-26 Score=207.01 Aligned_cols=280 Identities=18% Similarity=0.151 Sum_probs=190.9
Q ss_pred CCcEEEecCcHHHHHHHHHHh----cCCCC----eEEecCCCCCChhhhhhhccCcEEEEEeC--CCCCCcc----ccHH
Q 019899 17 PSQIVLTAGATPAVEILCFCL----ADHGN----ALLVPSPYYPGFDRDIRFRTGVELIPVHC--RSTDNFA----FSIT 82 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l----~~~gd----~vl~~~p~~~~~~~~~~~~~g~~v~~v~~--~~~~~~~----~~~~ 82 (334)
.+++++++|+++|+..++..+ ..+|| +|++.++.|+++..... ..+......+. +..+++. .|++
T Consensus 88 ~~~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 166 (389)
T PRK01278 88 ADKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATI-AAGGQEKYLEGFGPLVPGFDQVPFGDIE 166 (389)
T ss_pred CCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHH-hccCChhhcccCCCCCCCceEeCCCCHH
Confidence 478999999999999998876 34565 89999999998876655 33322211110 0011111 5889
Q ss_pred HHHHHHHHHHHcCCceeEEEEeCCCCCcc-cCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcc-hhhhhhhccc
Q 019899 83 ALDQAFNQARKRGVKVRGILICNPANPVG-NIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFV-SMAEILEAEE 160 (334)
Q Consensus 83 ~l~~~l~~~~~~~~~~~~i~~~~p~nptG-~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~-~~~~~~~~~~ 160 (334)
.+++++++ ++++|++..++||+| .++|.+.+++|.++|++||+++|+||+|.++.+.+..+. ....+
T Consensus 167 ~l~~~l~~------~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~----- 235 (389)
T PRK01278 167 ALKAAITP------NTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGV----- 235 (389)
T ss_pred HHHHhhCC------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCC-----
Confidence 99998864 788888886688888 788999999999999999999999999998766554221 11111
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh--hcccCCChHHHHHHHHhhCChH--HHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL--TRFCSISAPTQRLLISMLSDTK--FIQEYLETNKRRIK 236 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~ 236 (334)
.++ +.|+||.++ +|+|+||+++ ++++.+.+... ...++.+++.+.++.+.++..+ ...++..++.++++
T Consensus 236 -~pd----i~t~sK~l~-~G~~ig~~~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~ 308 (389)
T PRK01278 236 -TPD----IMAVAKGIG-GGFPLGACLA-TEEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLK 308 (389)
T ss_pred -CCC----EEEEehhcc-CCcceEEEEE-cHHHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 122 458999998 8999999998 77777777543 2345678888888877664321 11222333333333
Q ss_pred HHHHHHHHHHHhCC-CcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-C
Q 019899 237 KLYDSFVAGLKQLG-IRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS-L 314 (334)
Q Consensus 237 ~~~~~~~~~l~~~g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~ 314 (334)
++.+.+.+ ... +.......|.++|++++. +..++...|++ +||.+.|+. .+++|++++. .
T Consensus 309 ~~l~~l~~---~~~~~~~~v~g~G~~~~i~~~~--------~~~~~~~~l~~-~GV~~~p~~------~~~lR~~p~~~~ 370 (389)
T PRK01278 309 QKLEGLVD---RFPDVIEEVRGKGLLLGLKCVV--------PNRDLVQALRD-EGLLTVGAG------DNVVRLLPPLII 370 (389)
T ss_pred HHHHHHHh---hCCCceeeEecccEEEEEEEec--------CHHHHHHHHHH-CCeEEeecC------CCEEEEeCCccc
Confidence 33333221 121 211122356777777743 24678888666 599998863 4789999764 6
Q ss_pred CcccHHHHHHHHHHHHHHc
Q 019899 315 THEDIPLVIERIQKVAETC 333 (334)
Q Consensus 315 ~~~~l~~~l~~l~~~~~~~ 333 (334)
+++++++++++|.++++++
T Consensus 371 ~~~~i~~~l~~l~~~l~~~ 389 (389)
T PRK01278 371 TEEEIDEALERLERAAESL 389 (389)
T ss_pred CHHHHHHHHHHHHHHHHhC
Confidence 8999999999999998753
No 159
>PLN02242 methionine gamma-lyase
Probab=99.95 E-value=9.8e-26 Score=203.08 Aligned_cols=282 Identities=15% Similarity=0.166 Sum_probs=196.6
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhh----hccCcEEEEEeCCCCCCcccc
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIR----FRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~----~~~g~~v~~v~~~~~~~~~~~ 80 (334)
+.+.++...+ .+.+++++|+++|+..++.+++++||+|+++.|.|+.+...+. ...|.+++.++. .|
T Consensus 81 LE~~lA~l~g--~~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~-------~d 151 (418)
T PLN02242 81 LGRQMAALEG--TEAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDI-------TD 151 (418)
T ss_pred HHHHHHHHhC--CCeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCC-------CC
Confidence 3344444333 4678899999999999999999999999999999988866542 136777777764 27
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++. ++++|++++|+||||.+.+ +++|+++|+++|++||+|++|..+.+.. . .
T Consensus 152 ~e~l~~~i~~~-----~tklV~lesp~NPtG~v~d---l~~I~~la~~~gi~livDea~~~~~~~~------~---~--- 211 (418)
T PLN02242 152 LEAVKKAVVPG-----KTKVLYFESISNPTLTVAD---IPELARIAHEKGVTVVVDNTFAPMVLSP------A---R--- 211 (418)
T ss_pred HHHHHHhcCcC-----CCEEEEEecCCCCCCcccC---HHHHHHHHHHhCCEEEEECCCCccCCCH------H---H---
Confidence 89999988751 4899999999999999998 9999999999999999999997654311 1 1
Q ss_pred cCCCcEEEEecccccCCCCCce-EEEEeecCHHHHHHHHHhhc----ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFR-TGVIYSYNESVLAAAKKLTR----FCSISAPTQRLLISMLSDTKFIQEYLETNKRRI 235 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r-~g~i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 235 (334)
.+.+++++|+||.++.+|.+ .||+++ ++++++.++.... ..+.+...|.+...+.... . +..+.+++
T Consensus 212 --~g~divv~S~SK~l~g~g~~~gG~iv~-~~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l~-t----l~~r~~~~ 283 (418)
T PLN02242 212 --LGADVVVHSISKFISGGADIIAGAVCG-PAELVNSMMDLHHGALMLLGPTMNPKVAFELSERLP-H----LSLRMKEH 283 (418)
T ss_pred --cCCcEEEEeCccccCCCCCceEEEEEc-CHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcCCC-c----HHHHHHHH
Confidence 35678999999999878876 588887 7888888876533 2344555666666555432 2 23455678
Q ss_pred HHHHHHHHHHHHhCCCcccCCC-------------------ceeEEeeecCCcCCCCChhhHHHHHHHHHHhc----CeE
Q 019899 236 KKLYDSFVAGLKQLGIRCSESS-------------------AGLYCWADMSGLIPSYSEKGELELWDKLLNIA----KIN 292 (334)
Q Consensus 236 ~~~~~~~~~~l~~~g~~~~~~~-------------------~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~----gi~ 292 (334)
.++++++.+.|+++++++..|. .|-.+++++.. ......+++. ++-. .+.
T Consensus 284 ~~~a~~la~~L~~~~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~~------~~~~~~f~~~-l~~~~~~~~~~ 356 (418)
T PLN02242 284 CRRAMEYAKRMKELGLKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMDT------EERANRLMRY-LQNSTQFGFMA 356 (418)
T ss_pred HHHHHHHHHHHHhCCCEEECCCCCCCccHHHHHHhcccCCCceeEEEEEECC------HHHHHHHHHH-hhcccccceee
Confidence 8899999999998876554221 23344556631 1223445555 3311 222
Q ss_pred EcCCCCcCC---------------------CCCCeEEEEecCCCcc-cHHHHHHHHHHHHHHc
Q 019899 293 VTPGSACHC---------------------IEPGWFRCCFTSLTHE-DIPLVIERIQKVAETC 333 (334)
Q Consensus 293 v~~g~~~~~---------------------~~~~~iRi~~~~~~~~-~l~~~l~~l~~~~~~~ 333 (334)
+..|..-.. ..++-+|+|++ .| +.+.+++.|.+++++-
T Consensus 357 ~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvG---lE~~~~dli~dl~~al~~~ 416 (418)
T PLN02242 357 VSLGYYETLMSCSGSSTSSELDPEEKAAAGISPGLVRMSVG---YTGTLEQRWSQFEKALSAM 416 (418)
T ss_pred ecCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEec---CCCCHHHHHHHHHHHHHHh
Confidence 333332110 01357999999 66 4888999999988763
No 160
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.95 E-value=1.7e-26 Score=205.50 Aligned_cols=283 Identities=16% Similarity=0.197 Sum_probs=198.3
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcC------------C--CCeEEecCCCCCChhhhhhhccCcEEE
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLAD------------H--GNALLVPSPYYPGFDRDIRFRTGVELI 67 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~------------~--gd~vl~~~p~~~~~~~~~~~~~g~~v~ 67 (334)
++|+.+.++ .+.+.+++++|+|+|+++..++.++.. + ++.|+++.++|.++...+. ..|.+++
T Consensus 44 ~~~~~~~~g--~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~-~~g~~~~ 120 (345)
T cd06450 44 VNWLAKLFG--LPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAA-YLDVKVR 120 (345)
T ss_pred HHHHHHHhC--CCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHH-HHhcCeE
Confidence 455555544 332456899999999999999988742 2 3478889999999988888 7799999
Q ss_pred EEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCC
Q 019899 68 PVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNE 147 (334)
Q Consensus 68 ~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~ 147 (334)
.+++++ ++.+|+++|++++++...++.+++++++++|+||||.+.+ +++|.++|+++|+++++|++|+.+.+...
T Consensus 121 ~v~~~~--~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~~~~~~~~~l~vD~a~~~~~~~~~ 195 (345)
T cd06450 121 LVPVDE--DGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP---LEEIADLAEKYDLWLHVDAAYGGFLLPFP 195 (345)
T ss_pred EeeeCC--CCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC---HHHHHHHHHHhCCeEEEechhhHHHhhCh
Confidence 999843 3489999999999875555667888999999999999988 99999999999999999999987664321
Q ss_pred CcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHH
Q 019899 148 EFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEY 227 (334)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 227 (334)
..... ... . .+.+.+..|++|+++ ++.++|+++.+ ...+.++..++. ...
T Consensus 196 ~~~~~--~~~---~-~~~d~~~~s~~K~l~-~p~g~g~~~~~------------------~~~~~~~l~~l~-----~~g 245 (345)
T cd06450 196 EPRHL--DFG---I-ERVDSISVDPHKYGL-VPLGCSAVLVR------------------ALKLWATLRRFG-----RDG 245 (345)
T ss_pred hhHHH--hcC---c-cccCEEEEchhHhhC-CCcchHHHHHH------------------HHHHHHHHHHHh-----HHH
Confidence 11111 000 0 234556679999876 66778888763 223333333332 233
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC-CCcccC-CCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCC
Q 019899 228 LETNKRRIKKLYDSFVAGLKQL-GIRCSE-SSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPG 305 (334)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~l~~~-g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~ 305 (334)
+++..++..++++++.+.|.++ ++++.. +..++++ +.++... ....+..++.++| .++|+.+.++..+. .+.
T Consensus 246 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~-f~~~~~~--~~~~~~~~i~~~L-~~~g~~~~~~~~~~--~~~ 319 (345)
T cd06450 246 YGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVC-FRLKPSV--KLDELNYDLSDRL-NERGGWHVPATTLG--GPN 319 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEE-EEECCcc--hhhHHHHHHHHHH-HhcCCEEEEeeEEC--CeE
Confidence 4667778888999999999887 676654 4455544 4554311 0012345677775 45665554444332 357
Q ss_pred eEEEEecC-C-CcccHHHHHHHHHH
Q 019899 306 WFRCCFTS-L-THEDIPLVIERIQK 328 (334)
Q Consensus 306 ~iRi~~~~-~-~~~~l~~~l~~l~~ 328 (334)
++|++++. . +++|++++++.|.+
T Consensus 320 ~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 320 VLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHh
Confidence 89999985 4 89999999999875
No 161
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.95 E-value=2.2e-26 Score=208.42 Aligned_cols=290 Identities=16% Similarity=0.189 Sum_probs=204.1
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc----CCCCeEEecCCCCCChhhhhhh--ccCcEEEEEeCCCCCCcc
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLA----DHGNALLVPSPYYPGFDRDIRF--RTGVELIPVHCRSTDNFA 78 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~----~~gd~vl~~~p~~~~~~~~~~~--~~g~~v~~v~~~~~~~~~ 78 (334)
+++.+++.+++++++|++++|+|++++.++.++. ++||+|+++.++|+++...+.. ..|.+++.++++ .++.
T Consensus 52 ~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~ 129 (402)
T TIGR02006 52 ARNQVAELIGADSREIVFTSGATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPK--SNGL 129 (402)
T ss_pred HHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccC--CCCc
Confidence 4555667778888999999999999999887753 6899999999999987766531 459999999874 4557
Q ss_pred ccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhc
Q 019899 79 FSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEA 158 (334)
Q Consensus 79 ~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~ 158 (334)
+|++.+++++++ +++++++++++||||.+.| +++|.++|+++|+++++|++++... ....+. .
T Consensus 130 ~d~~~l~~~l~~------~~~lv~v~~~~n~tG~~~~---~~~I~~l~~~~g~~livD~a~a~g~----~~~~~~---~- 192 (402)
T TIGR02006 130 IDLEELKAAIRD------DTILVSIMHVNNEIGVIQD---IAAIGEICRERKVFFHVDAAQSVGK----IPINVN---E- 192 (402)
T ss_pred CCHHHHHHhcCC------CCEEEEEECCCcCceeccc---HHHHHHHHHHcCCEEEEEcchhcCC----cccCcc---c-
Confidence 899999999875 7899999999999999999 8899999999999999999987522 222221 1
Q ss_pred cccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh---------hcccCCChHHHHHHHHhhCChHHHHHHHH
Q 019899 159 EEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL---------TRFCSISAPTQRLLISMLSDTKFIQEYLE 229 (334)
Q Consensus 159 ~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 229 (334)
.+.++++.|.+|.+|.+| +|+++.+++.. ..+... ...++.+.....++...++. +.+.++
T Consensus 193 ----~~~D~~~~s~~K~~gp~G--~G~l~~~~~~~-~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~---~~~~~~ 262 (402)
T TIGR02006 193 ----LKVDLMSISGHKIYGPKG--IGALYVRRKPR-VRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRI---AKEEMA 262 (402)
T ss_pred ----cCCCEEEEehhhhcCCCc--eEEEEEccCCC-CCCCceecCCCccCCccCCCccHHHHHHHHHHHHH---HHHhHH
Confidence 456788889999877445 78887743222 222111 11234455555556555543 234456
Q ss_pred HHHHHHHHHHHHHHHHHHhC-CCcccCCC---ceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC---
Q 019899 230 TNKRRIKKLYDSFVAGLKQL-GIRCSESS---AGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI--- 302 (334)
Q Consensus 230 ~~~~~~~~~~~~~~~~l~~~-g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~--- 302 (334)
...++.++.++++.+.|+++ ++.+..+. .+..+.+.++.. +..++... + .+|.+..|..|.+.
T Consensus 263 ~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~~-------~~~~~~~~-l--~~i~v~~G~~c~~~~~~ 332 (402)
T TIGR02006 263 QDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFNYV-------EGESLIMA-L--KDLAVSSGSACTSASLE 332 (402)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEeCc-------CHHHHHHh-c--CCEEEechhhcCCCCCC
Confidence 67788889999999999875 45543221 111111333321 12344433 2 58888888777542
Q ss_pred --------------CCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 303 --------------EPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 303 --------------~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
..+.+|+|+++ .|++|++++++.|+++++++
T Consensus 333 ~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~~~ 378 (402)
T TIGR02006 333 PSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSAIDKL 378 (402)
T ss_pred ccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 13689999996 69999999999999988654
No 162
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.95 E-value=3.3e-25 Score=200.93 Aligned_cols=295 Identities=14% Similarity=0.112 Sum_probs=207.0
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcC--CCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLAD--HGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSIT 82 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~ 82 (334)
+.+.+++.++ .+..++++++++++..++..+.. +||.|+.+...|.+....+. ..|.+++.++. .|++
T Consensus 95 le~~la~~~g--~~~~~~~~SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~-~~g~~~~~~~~-------~d~~ 164 (406)
T PRK13393 95 LEAELADLHG--KEAALLFTSGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGIR-HSRAEKRIFRH-------NDPA 164 (406)
T ss_pred HHHHHHHHhC--CCcEEEeCCcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHH-HcCCeEEEeCC-------CCHH
Confidence 4445555454 35667777777899999987754 78888888888888888888 77888777763 3678
Q ss_pred HHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccC
Q 019899 83 ALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVD 162 (334)
Q Consensus 83 ~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (334)
.+++.++... ..++++|++++++|++|.+.| +++|.++|+++++++++||+|+...++..+ ..+.... +..
T Consensus 165 ~l~~~l~~~~--~~~~~~v~~~~v~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~G-~g~~~~~---~~~ 235 (406)
T PRK13393 165 DLERKLSDLD--PHRPKLVAFESVYSMDGDIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGPRG-GGIAERE---GLA 235 (406)
T ss_pred HHHHHHHhcc--CCCCEEEEEcCCCCCCCchhC---HHHHHHHHHHcCCEEEEECCccccccCCCC-Cchhhhc---CCC
Confidence 8888776421 125788899999999999999 999999999999999999999855543221 1111111 111
Q ss_pred CCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc----cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 163 KDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF----CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 163 ~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
...+++++|+||.+|++| ||+++ ++++.+.+...... .+.++..+.++.+.++.. ++. ...+.++.++
T Consensus 236 ~~~~i~~~tlsKa~g~~G---G~~~~-~~~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~---~~~-~~~~~~~~~~ 307 (406)
T PRK13393 236 DRLTIIEGTLAKAFGVMG---GYITG-SAALCDFIRSFASGFIFTTSLPPAVAAGALASVRHL---KAS-SAERERHQDR 307 (406)
T ss_pred CCCeEEEEeCchhhcccC---ceeeC-CHHHHHHHHHhCcCceecCccCHHHHHHHHHHHHHH---hhC-HHHHHHHHHH
Confidence 334677899999998777 89987 88888888765433 234555566666665432 222 1224567788
Q ss_pred HHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC-CCCeEEEEecC-CCc
Q 019899 239 YDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI-EPGWFRCCFTS-LTH 316 (334)
Q Consensus 239 ~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~-~~~~iRi~~~~-~~~ 316 (334)
.+++.+.|++.|+++..+.++++. +.++.. .+..++.+.|++++||.+.++.+.... ..+++|++++. .++
T Consensus 308 ~~~l~~~L~~~g~~~~~~~~~i~~-v~~~~~------~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~ 380 (406)
T PRK13393 308 VARLRARLDKAGIPHLPNPSHIVP-VMVGDP------VLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTD 380 (406)
T ss_pred HHHHHHHHHHcCCCcCCCCCCeEE-EEeCCH------HHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCH
Confidence 899999998888877666665543 333321 234678888777679999886543221 34689999985 699
Q ss_pred ccHHHHHHHHHHHHHHc
Q 019899 317 EDIPLVIERIQKVAETC 333 (334)
Q Consensus 317 ~~l~~~l~~l~~~~~~~ 333 (334)
+|++++++.|++++++.
T Consensus 381 edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 381 ADIEHLVQALSEIWARL 397 (406)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999988653
No 163
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.95 E-value=6.6e-25 Score=195.63 Aligned_cols=280 Identities=17% Similarity=0.224 Sum_probs=195.2
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhh----hhhccCcEEEEEeCCCCCCcccc
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRD----IRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
+.+.+++..+.+ ..++++|+++++.+++ .++++||+|+++.|.|++.... +. ..|.+++.++. .|
T Consensus 57 le~~la~l~g~~--~~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~-~~G~~v~~vd~-------~d 125 (366)
T PRK08247 57 LEQAIADLEGGD--QGFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWK-KWNVRFVYVNT-------AS 125 (366)
T ss_pred HHHHHHHHhCCC--cEEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhh-ccCceEEEECC-------CC
Confidence 455555555543 4578888899999876 5778999999999999985443 34 58999988874 37
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++ ++++|++++|+||+|...+ +++|+++|+++|+++|+|++|...... .++ .
T Consensus 126 ~~~l~~~i~~------~tklv~le~P~NP~~~~~d---l~~I~~la~~~g~~lIvD~t~~~~~~~----~p~----~--- 185 (366)
T PRK08247 126 LKAIEQAITP------NTKAIFIETPTNPLMQETD---IAAIAKIAKKHGLLLIVDNTFYTPVLQ----RPL----E--- 185 (366)
T ss_pred HHHHHHhccc------CceEEEEECCCCCCCcHHH---HHHHHHHHHHcCCEEEEECCCcccccc----Cch----h---
Confidence 8999998876 7899999999999876555 999999999999999999998532211 111 1
Q ss_pred cCCCcEEEEecccccCCC-CCceEEEEeecCHHHHHHHHHhhcc--cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSL-PGFRTGVIYSYNESVLAAAKKLTRF--CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~-~g~r~g~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
.+.+++++|+||.++. ++++.|+++++++++.+.+...+.. ...++..+..+...++.. ..+.++.++
T Consensus 186 --~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~tl-------~~r~~~~~~ 256 (366)
T PRK08247 186 --EGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWLLIRGMKTL-------ALRMRQHEE 256 (366)
T ss_pred --cCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCCCCChHHHHHHHhccCcH-------HHHHHHHHH
Confidence 4667999999999963 3578999998557788877655443 345666666666655432 233445688
Q ss_pred HHHHHHHHHHhC-CCcc--cCCCceeEEeeecCCcCCCCChhhHHHHHHH---------HHHhcCeEEcCCCCcCCC---
Q 019899 238 LYDSFVAGLKQL-GIRC--SESSAGLYCWADMSGLIPSYSEKGELELWDK---------LLNIAKINVTPGSACHCI--- 302 (334)
Q Consensus 238 ~~~~~~~~l~~~-g~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---------ll~~~gi~v~~g~~~~~~--- 302 (334)
+++.+.+.|+++ ++.. .++.+|++.| ++... .....+.+. |.....+.+.|+..++..
T Consensus 257 ~a~~l~~~L~~~p~v~~v~~P~~gg~~sf-~~~~~------~~~~~~~~~l~~~~~~~slg~~~sl~~~p~~~~~~~~~~ 329 (366)
T PRK08247 257 NAKAIAAFLNEQPGVTDVLYPGRGGMLSF-RLQDE------EWVNPFLKSLKLITFAESLGGVESFITYPATQTHADIPE 329 (366)
T ss_pred HHHHHHHHHHhCCCeeEEecCCcCcEEEE-EECCH------HHHHHHHHcCCcceEccCCCCCceEEECCcccccccCCH
Confidence 889999999987 5653 3336888776 55321 111122222 112334556676554321
Q ss_pred --------CCCeEEEEecCCCcccHHHHHHHHHHHHHHcC
Q 019899 303 --------EPGWFRCCFTSLTHEDIPLVIERIQKVAETCK 334 (334)
Q Consensus 303 --------~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~~~ 334 (334)
.++-+|+|++ -|+.+.+++.|.+++++.+
T Consensus 330 ~~r~~~gi~~~~~R~svG---lE~~~dl~~dl~~al~~~~ 366 (366)
T PRK08247 330 EIRIANGVCNRLLRFSVG---IENVEDLIADLKQAFKQVK 366 (366)
T ss_pred HHHHhcCCCCCeEEEEec---cCCHHHHHHHHHHHHhhcC
Confidence 2357999999 7788899999999987643
No 164
>PRK14012 cysteine desulfurase; Provisional
Probab=99.95 E-value=8e-26 Score=204.92 Aligned_cols=288 Identities=18% Similarity=0.220 Sum_probs=198.0
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc----CCCCeEEecCCCCCChhhhhhh--ccCcEEEEEeCCCCCCcc
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLA----DHGNALLVPSPYYPGFDRDIRF--RTGVELIPVHCRSTDNFA 78 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~----~~gd~vl~~~p~~~~~~~~~~~--~~g~~v~~v~~~~~~~~~ 78 (334)
+++.+++.++++++++++++|+|+++++++.++. ++||+|+++.++|+++...+.. ..|.+++.++++ .++.
T Consensus 54 ~r~~ia~~~g~~~~~v~~~~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~--~~g~ 131 (404)
T PRK14012 54 ARNQIADLIGADPREIVFTSGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQ--SNGI 131 (404)
T ss_pred HHHHHHHHcCcCcCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccC--CCCc
Confidence 4556677788888899999999999999887763 7899999999999888665541 359999999874 4557
Q ss_pred ccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhc
Q 019899 79 FSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEA 158 (334)
Q Consensus 79 ~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~ 158 (334)
+|++++++++++ +++++++++++||||.+.| +++|.++|+++|+++++|++++. +....++..
T Consensus 132 ~d~~~l~~~i~~------~t~lv~~~~~~n~tG~~~~---~~~I~~la~~~g~~vivD~a~~~----g~~~~~~~~---- 194 (404)
T PRK14012 132 IDLEKLEAAMRD------DTILVSIMHVNNEIGVIQD---IAAIGEICRERGIIFHVDAAQSV----GKVPIDLSK---- 194 (404)
T ss_pred CCHHHHHHhcCC------CCEEEEEECcCCCccchhh---HHHHHHHHHHcCCEEEEEcchhc----CCcccCccc----
Confidence 899999999976 7899999999999999999 89999999999999999999875 222222221
Q ss_pred cccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh---------hcccCCChHHHHHHHHhhCChHHHHHHHH
Q 019899 159 EEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL---------TRFCSISAPTQRLLISMLSDTKFIQEYLE 229 (334)
Q Consensus 159 ~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 229 (334)
.+.++++.|++|.+| ++ ++|+++.+++.. ..+... ...++.+.....++..++.. ......
T Consensus 195 ----~~~D~~~~s~~K~~g-p~-g~G~l~~~~~~~-~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~---~~~~~~ 264 (404)
T PRK14012 195 ----LKVDLMSFSAHKIYG-PK-GIGALYVRRKPR-VRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARI---AKEEMA 264 (404)
T ss_pred ----CCCCEEEEehhhccC-CC-ceEEEEEecCCC-CCCCceecCCCccCCccCCCcCHHHHHHHHHHHHH---HHhhHH
Confidence 345677789999776 43 588888744322 122111 01122233333333333322 122334
Q ss_pred HHHHHHHHHHHHHHHHHHhC-CCcccCC-----CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC-
Q 019899 230 TNKRRIKKLYDSFVAGLKQL-GIRCSES-----SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI- 302 (334)
Q Consensus 230 ~~~~~~~~~~~~~~~~l~~~-g~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~- 302 (334)
+..++.++.++++.+.|++. ++.+..+ ...+.+++.... ..++... ++ ++.+.+|..|.+.
T Consensus 265 ~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~-l~--~~~i~~g~~~~~~~ 332 (404)
T PRK14012 265 TENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYVE---------GESLIMA-LK--DLAVSSGSACTSAS 332 (404)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCcC---------HHHHHHh-CC--CeEEEchhhhCCCC
Confidence 55677778888888888765 4443321 123344554432 1345444 33 6777777655331
Q ss_pred ----------------CCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 303 ----------------EPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 303 ----------------~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
..+.+|+++++ .+++|++++++.|+++++.+
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~ 380 (404)
T PRK14012 333 LEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGKL 380 (404)
T ss_pred CCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 13679999996 69999999999999988764
No 165
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.95 E-value=6.6e-25 Score=199.86 Aligned_cols=292 Identities=12% Similarity=0.070 Sum_probs=197.6
Q ss_pred hhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhh-----hhhccCcEEEEEeCCCCCCccccHH
Q 019899 8 VLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRD-----IRFRTGVELIPVHCRSTDNFAFSIT 82 (334)
Q Consensus 8 ~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~-----~~~~~g~~v~~v~~~~~~~~~~~~~ 82 (334)
.+++.++++..+|++++ +++++..++.+++++||+|+++.|+|.++... +. ..|.+++.++++. +++.+|++
T Consensus 79 ~la~~~g~~~~~i~~~s-gt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~d~~ 155 (416)
T PRK00011 79 RAKELFGAEYANVQPHS-GSQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFS-GKLYNVVSYGVDE-ETGLIDYD 155 (416)
T ss_pred HHHHHhCCCceeeecCC-chHHHHHHHHHhcCCCCEEEEeccccCCccccccccccc-cceeeEeecCcCc-ccCCcCHH
Confidence 34555666666666655 57799999999999999999999999865322 12 3467888888742 34789999
Q ss_pred HHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccc-cCCCCcchhhhhhhcccc
Q 019899 83 ALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSI-FGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 83 ~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~-~~~~~~~~~~~~~~~~~~ 161 (334)
++++++++. ++++++++.+++ |...| +++|.++|+++|+++|+|++|.... +.+.....+
T Consensus 156 ~l~~~i~~~-----~~k~v~~~~~~~--~~~~~---~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~--------- 216 (416)
T PRK00011 156 EVEKLALEH-----KPKLIIAGASAY--SRPID---FKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPV--------- 216 (416)
T ss_pred HHHHHHHhc-----CCCEEEECCCcC--CCccC---HHHHHHHHHHcCCEEEEECcchhcccccCccCCCC---------
Confidence 999999752 688888775554 45566 8999999999999999999986422 211111111
Q ss_pred CCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCC---hHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSIS---APTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
.+.++++.|+||++ +|.|.||++++++++.+.++.....+..+ ...+.++..++. +...+.+.++.+++.++
T Consensus 217 -~~~di~~~S~~K~l--~g~~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~--~~~~~~~~~~~~~~~~~ 291 (416)
T PRK00011 217 -PHADVVTTTTHKTL--RGPRGGLILTNDEELAKKINSAVFPGIQGGPLMHVIAAKAVAFK--EALEPEFKEYAQQVVKN 291 (416)
T ss_pred -CCCcEEEecCCcCC--CCCCceEEEeCCHHHHHHHHHHhCccccCCccHHHHHHHHHHHH--HHHhhhHHHHHHHHHHH
Confidence 13357789999977 67788999996678888887655443221 222222222221 12233457778889999
Q ss_pred HHHHHHHHHhCCCcccC-CCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCC-CcC---CCCCCeEEEEec-
Q 019899 239 YDSFVAGLKQLGIRCSE-SSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGS-ACH---CIEPGWFRCCFT- 312 (334)
Q Consensus 239 ~~~~~~~l~~~g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~-~~~---~~~~~~iRi~~~- 312 (334)
++++.+.|++.|+++.. ...++++|+.+++.. .+..++... ++++||.+..+. .+. +..+..+|++..
T Consensus 292 ~~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~~~-----~~~~~~~~~-L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~ 365 (416)
T PRK00011 292 AKALAEALAERGFRVVSGGTDNHLVLVDLRSKG-----LTGKEAEAA-LEEANITVNKNAVPFDPRSPFVTSGIRIGTPA 365 (416)
T ss_pred HHHHHHHHHhCCCeeeecCCCCeEEEEeCcccC-----CCHHHHHHH-HHHcCcEEccCcCCCCCCCCCCCCceEecCHH
Confidence 99999999998887653 223477888885321 123456665 667899997432 111 112456899652
Q ss_pred ----CCCcccHHHHHHHHHHHHHH
Q 019899 313 ----SLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 313 ----~~~~~~l~~~l~~l~~~~~~ 332 (334)
..+++|++.+++.|++++..
T Consensus 366 ~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 366 ITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred HhhcCcCHHHHHHHHHHHHHHHhc
Confidence 25789999999999998764
No 166
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.94 E-value=9.9e-25 Score=190.95 Aligned_cols=291 Identities=19% Similarity=0.199 Sum_probs=215.8
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITAL 84 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l 84 (334)
|.+.++++++ .+..++.+++..++..++.+|++++|.|+.+...|.+..+.++ ..+++++.+. +.|++.|
T Consensus 89 LE~~lA~f~g--~e~al~f~SGy~AN~~~i~~l~~~~dli~~D~lnHASiidG~r-ls~a~~~~f~-------HnD~~~L 158 (388)
T COG0156 89 LEEELADFLG--AEAALLFSSGFVANLGLLSALLKKGDLIFSDELNHASIIDGIR-LSRAEVRRFK-------HNDLDHL 158 (388)
T ss_pred HHHHHHHHhC--CCcEEEEcccchhHHHHHHHhcCCCcEEEEechhhhhHHHHHH-hCCCcEEEec-------CCCHHHH
Confidence 3344454443 5678888888889999999999999999999999999999999 9999999988 4689999
Q ss_pred HHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCC--CcchhhhhhhccccC
Q 019899 85 DQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNE--EFVSMAEILEAEEVD 162 (334)
Q Consensus 85 ~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~--~~~~~~~~~~~~~~~ 162 (334)
++.+++.+..+.+.+.|+....-...|.+.| +++|++++++|+.++++||+|+...++.. +......+.+
T Consensus 159 e~~l~~~~~~~~~~~~IvtegVfSMdGdiAp---L~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~----- 230 (388)
T COG0156 159 EALLEEARENGARRKLIVTEGVFSMDGDIAP---LPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEP----- 230 (388)
T ss_pred HHHHHhhhccCCCceEEEEeccccCCCCcCC---HHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCC-----
Confidence 9999986533324565666666789999999 99999999999999999999999888643 3333333322
Q ss_pred CCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc--cC--CChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 163 KDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--CS--ISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 163 ~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
...++.++|++|++|..| ||+.+ +..+.+.++....+ |+ .+|....++...++. +. ....++++++++
T Consensus 231 ~~vdi~~gTlsKAlGs~G---g~v~g-~~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~---l~-~~~~~r~~L~~~ 302 (388)
T COG0156 231 EEVDIIVGTLGKALGSSG---GYIAG-SAALIDYLRNRARPFIFSTALPPAVAAAALAALRI---LE-EGPERRERLQEL 302 (388)
T ss_pred ccceEEEEEchhhhcccC---ceeeC-cHHHHHHHHHhCCceeccCCCCHHHHHHHHHHHHH---HH-hCHHHHHHHHHH
Confidence 455899999999999777 88887 99999999876444 32 233333334444432 22 235677888899
Q ss_pred HHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC-CCCeEEEEecC-CCc
Q 019899 239 YDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI-EPGWFRCCFTS-LTH 316 (334)
Q Consensus 239 ~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~-~~~~iRi~~~~-~~~ 316 (334)
..++.+.+...++.+.....+.. .+.+... ..+.++...|+++ ||.+.+..+.... ....+|++++. .|+
T Consensus 303 ~~~~~~~~~~~~~~~~~s~s~I~-pv~~gd~------~~a~~~s~~l~~~-Gi~v~~i~~PTVp~gtarlRi~lta~ht~ 374 (388)
T COG0156 303 AAFFRSLLKALGLVLLPSESPII-PVILGDE------ERALEASRALLEE-GIYVSAIRPPTVPKGTARLRITLTAAHTE 374 (388)
T ss_pred HHHHHHHHHhcCCccCCCCCCee-eeEeCCH------HHHHHHHHHHHHC-CeeEeeecCCCCCCCcceEEEEecCCCCH
Confidence 99999888777887755544443 2333321 2356788887776 9999876543332 34789999986 699
Q ss_pred ccHHHHHHHHHHH
Q 019899 317 EDIPLVIERIQKV 329 (334)
Q Consensus 317 ~~l~~~l~~l~~~ 329 (334)
+||+.+++.+.++
T Consensus 375 ~~I~~l~~~l~~~ 387 (388)
T COG0156 375 EDIDRLAEALSEV 387 (388)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998865
No 167
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.94 E-value=4.3e-24 Score=192.22 Aligned_cols=279 Identities=16% Similarity=0.184 Sum_probs=188.9
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhh----hhccCcEEEEEeCCCCCCcccc
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDI----RFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
+++.++...+ .+++++++|+++|+..++.+++++||+|+++.|.|+.+.... + ..|.+++.++. .|
T Consensus 69 Le~~iA~~~g--~~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~-~~G~~v~~vd~-------~d 138 (400)
T PRK06234 69 VENKLALLEG--GEAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLT-RYGVEVTFVDT-------SN 138 (400)
T ss_pred HHHHHHHHhC--CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHh-hCCeEEEEECC-------CC
Confidence 4445554444 357899999999999999999999999999999998766543 4 68999999885 27
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc--CcEEEEeccccccccCCCCcchhhhhhhc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK--NIHVISDEIYGGSIFGNEEFVSMAEILEA 158 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~--~~~vi~D~~~~~~~~~~~~~~~~~~~~~~ 158 (334)
++++++++++ ++++|++++|+||||.+.| +++|.++|+++ |+++++|++|+...+. .++ .
T Consensus 139 ~e~l~~~i~~------~tklI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~~~~~----~~l----~- 200 (400)
T PRK06234 139 LEEVRNALKA------NTKVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCTPYIQ----RPL----Q- 200 (400)
T ss_pred HHHHHHHhcc------CCeEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCchhcC----Cch----h-
Confidence 8999999976 7899999999999999999 88899999986 9999999999864432 111 1
Q ss_pred cccCCCcEEEEecccccCCCCCceE-EEEeecCHHHHHHHHHh--hcc--cCCChHHHHHHHHhhCChHHHHHHHHHHHH
Q 019899 159 EEVDKDRVHIIYGLSKDLSLPGFRT-GVIYSYNESVLAAAKKL--TRF--CSISAPTQRLLISMLSDTKFIQEYLETNKR 233 (334)
Q Consensus 159 ~~~~~~~~~~~~s~sK~~~~~g~r~-g~i~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 233 (334)
.+.+++++|++|.++.+|.++ ||+++ ++++.+.++.. ... ...++.....+..-++.. ..+.+
T Consensus 201 ----~g~Divv~S~sK~l~g~g~~~gG~v~~-~~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~tl-------~~r~~ 268 (400)
T PRK06234 201 ----LGADVVVHSATKYLNGHGDVIAGFVVG-KEEFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKTL-------QIRME 268 (400)
T ss_pred ----hCCcEEEeeccccccCCCCceeEEEEe-cHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCcH-------HHHHH
Confidence 356789999999998788664 99888 77787777643 212 233444444344444332 23334
Q ss_pred HHHHHHHHHHHHHHhCC-Cc---ccC--------------CCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcC
Q 019899 234 RIKKLYDSFVAGLKQLG-IR---CSE--------------SSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTP 295 (334)
Q Consensus 234 ~~~~~~~~~~~~l~~~g-~~---~~~--------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~ 295 (334)
+..+++..+.+.|+++. +. +.. ...|-++.+++... .+....+.+. ++-.++...-
T Consensus 269 ~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~-----~~~~~~f~~~-l~~~~~~~s~ 342 (400)
T PRK06234 269 KHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGG-----VEEGKVVMNN-VKLATLAVSL 342 (400)
T ss_pred HHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCc-----HHHHHHHHHh-CCcceEeccC
Confidence 45567777777777652 11 100 01233445676532 1223455555 4445554443
Q ss_pred CCCcCC---------------------CCCCeEEEEecCCCcccHHHHHHHHHHHHHH
Q 019899 296 GSACHC---------------------IEPGWFRCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 296 g~~~~~---------------------~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
|..... ..++-+|+|++ -|+.+.+++.|.+++++
T Consensus 343 G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svG---lE~~~dl~~dl~~al~~ 397 (400)
T PRK06234 343 GDAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVG---LEDVDDIIADLKQALDL 397 (400)
T ss_pred CCCCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeC---CCCHHHHHHHHHHHHHH
Confidence 432211 02357999999 67788888888888764
No 168
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.94 E-value=1e-24 Score=197.80 Aligned_cols=281 Identities=17% Similarity=0.133 Sum_probs=188.4
Q ss_pred hhcCCCCCCCCcEEEecCcH-HHHHHHHHHhcCC--CCeEEecCCCCCChhhhhhhccC----cEEEEEeCCCCCCcccc
Q 019899 8 VLGQAVSFDPSQIVLTAGAT-PAVEILCFCLADH--GNALLVPSPYYPGFDRDIRFRTG----VELIPVHCRSTDNFAFS 80 (334)
Q Consensus 8 ~~~~~~~~~~~~i~~~~g~~-~~~~~~~~~l~~~--gd~vl~~~p~~~~~~~~~~~~~g----~~v~~v~~~~~~~~~~~ 80 (334)
.+++.++++.++++++++++ ++...++.++..+ ||+|++++|.|+++...+. ..| .+++.+++. +++.+|
T Consensus 72 ~la~~~g~~~~~v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~-~~~~~~g~~~~~v~~~--~~~~~d 148 (398)
T cd00613 72 MLCELTGMDVANASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVAR-TRGEPLGIEVVEVPSD--EGGTVD 148 (398)
T ss_pred HHHHHHCCCccceeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHH-HhcccCCcEEEEeccC--CCCCcC
Confidence 33344455666777777555 4555555566665 9999999999999988887 666 899998873 345789
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++ ++++|++++|+ |+|.+.+ .+++|.++|+++|+++|+|++++.... .... ..
T Consensus 149 ~~~l~~~i~~------~t~~viv~~~~-~~G~~~~--~l~~i~~la~~~g~~livD~~~~~~~~----~~~~---~~--- 209 (398)
T cd00613 149 LEALKEEVSE------EVAALMVQYPN-TLGVFED--LIKEIADIAHSAGALVYVDGDNLNLTG----LKPP---GE--- 209 (398)
T ss_pred HHHHHHhcCC------CeEEEEEECCC-CCceecc--hHHHHHHHHHhcCCEEEEEeccccccC----CCCh---HH---
Confidence 9999998865 78999999885 8999954 459999999999999999998754221 1111 11
Q ss_pred cCCCcEEEEecccccCCCC----CceEEEEeecCHHHHHHHHHh-------------------------------hcccC
Q 019899 161 VDKDRVHIIYGLSKDLSLP----GFRTGVIYSYNESVLAAAKKL-------------------------------TRFCS 205 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~----g~r~g~i~~~~~~~~~~~~~~-------------------------------~~~~~ 205 (334)
.+.++++.|++|++ ++ |.+.|+++. ++++.+.+... ...++
T Consensus 210 --~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~ 285 (398)
T cd00613 210 --YGADIVVGNLQKTG-VPHGGGGPGAGFFAV-KKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICT 285 (398)
T ss_pred --cCCCEEEeeccccC-CCCCCCCCceeEEEE-hhhhHhhCCCCeeccccccCCCcceEEecccchhhccccccccccee
Confidence 46678899999998 45 688999998 66666654110 00111
Q ss_pred CChHH-HHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCceeE--EeeecCCcCCCCChhhHHHHH
Q 019899 206 ISAPT-QRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLY--CWADMSGLIPSYSEKGELELW 282 (334)
Q Consensus 206 ~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~ 282 (334)
.++.. +.+...+.... .+.+.+.++++.++++++.+.|++++... .+.+.++ ++++++... ..+..+++
T Consensus 286 ~~~~~~~~a~~~l~~~~---~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~v~~~~~~~~----~~~~~~~~ 357 (398)
T cd00613 286 GQALLALMAAMYIVYLG---PEGLKEIAERAHLNANYLAKRLKEVGGVL-PFNGPFFHEFVLRLPPLY----GIRAEDLA 357 (398)
T ss_pred cHHHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHHHHHHHHhcCCcc-cCCCCeeEEEEEEcCCcc----hHHHHHHH
Confidence 12222 22222222111 33456778899999999999999876543 2222322 456665420 12456788
Q ss_pred HHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHH
Q 019899 283 DKLLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERI 326 (334)
Q Consensus 283 ~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l 326 (334)
..|+ ++||.+.+.. +..++.+|++++. .+++|++++++.|
T Consensus 358 ~~L~-~~gi~~~~~~---~~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 358 KALI-DGGFHAPTMY---LPVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred Hhhh-hcCccccccc---cCCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 8855 4798764322 2235789999985 6999999998864
No 169
>PLN02651 cysteine desulfurase
Probab=99.94 E-value=3e-25 Score=198.48 Aligned_cols=277 Identities=17% Similarity=0.199 Sum_probs=197.5
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHh----cCCCCeEEecCCCCCChhhhhhh--ccCcEEEEEeCCCCCCcc
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCL----ADHGNALLVPSPYYPGFDRDIRF--RTGVELIPVHCRSTDNFA 78 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l----~~~gd~vl~~~p~~~~~~~~~~~--~~g~~v~~v~~~~~~~~~ 78 (334)
+++.+++.+++++++|++++|+|++++.++..+ .++||+|+++...|+++...+.. ..|.+++.+++. +++.
T Consensus 48 ~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~ 125 (364)
T PLN02651 48 ARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVK--SDGL 125 (364)
T ss_pred HHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccC--CCCc
Confidence 455566777788899999999999988887654 46899999999888876554431 468899999873 4567
Q ss_pred ccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhc
Q 019899 79 FSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEA 158 (334)
Q Consensus 79 ~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~ 158 (334)
+|++++++++++ +++++++++++|+||.+.| +++|.++|+++|+++++|.+++. +.....+. .
T Consensus 126 ~d~~~l~~~i~~------~t~lv~v~~~~n~tG~~~~---l~~I~~~~~~~g~~~~vD~a~~~----g~~~~~~~---~- 188 (364)
T PLN02651 126 VDLDELAAAIRP------DTALVSVMAVNNEIGVIQP---VEEIGELCREKKVLFHTDAAQAV----GKIPVDVD---D- 188 (364)
T ss_pred CCHHHHHHhcCC------CcEEEEEECCCCCceeccc---HHHHHHHHHHcCCEEEEEcchhh----CCcccCcc---c-
Confidence 899999999976 7899999999999999999 89999999999999999999875 22222221 1
Q ss_pred cccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh---------hcccCCChHHHHHHHHhhCChHHHHHHHH
Q 019899 159 EEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL---------TRFCSISAPTQRLLISMLSDTKFIQEYLE 229 (334)
Q Consensus 159 ~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 229 (334)
.+.++++.|.+|++|. ..+|+++. +++....+... ...++.+.....++..+++.. .+..+
T Consensus 189 ----~~~D~~~~s~hK~~gp--~G~g~l~v-~~~~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~---~~~~~ 258 (364)
T PLN02651 189 ----LGVDLMSISGHKIYGP--KGVGALYV-RRRPRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAACELA---MKEMD 258 (364)
T ss_pred ----CCCCEEEechhhhCCC--CceEEEEE-cCCCCCCCCccccCCCccCCccCCCccHHHHHHHHHHHHHH---HHhHH
Confidence 5678899999996553 34788887 44333333211 123455656666666666432 33346
Q ss_pred HHHHHHHHHHHHHHHHHHh-C-CCcccCCCc-----eeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC
Q 019899 230 TNKRRIKKLYDSFVAGLKQ-L-GIRCSESSA-----GLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI 302 (334)
Q Consensus 230 ~~~~~~~~~~~~~~~~l~~-~-g~~~~~~~~-----g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~ 302 (334)
+..++.++..+++.+.|++ . ++++..+.. ...+.+.+++. +..++... |++ |.+..|+.|...
T Consensus 259 ~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~~-------~~~~~~~~-L~~--i~v~~g~~c~~~ 328 (364)
T PLN02651 259 YDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAYV-------EGESLLMG-LKE--VAVSSGSACTSA 328 (364)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCCC-------CHHHHHHH-hCC--EEEEchhhcCCC
Confidence 6778888888999998875 3 777765411 22344555532 34577777 453 999988877543
Q ss_pred -----------------CCCeEEEEecC-CCcccHH
Q 019899 303 -----------------EPGWFRCCFTS-LTHEDIP 320 (334)
Q Consensus 303 -----------------~~~~iRi~~~~-~~~~~l~ 320 (334)
..+.+|+|++. .|++|++
T Consensus 329 ~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 329 SLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred CCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 13689999996 5777764
No 170
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.94 E-value=8.6e-25 Score=200.78 Aligned_cols=280 Identities=17% Similarity=0.177 Sum_probs=196.4
Q ss_pred cCCCCCCCCcEEEecCcHHHHHHHHHHhc-CCCCeEEecCCCCCChhhhhhh---ccCcEEEEEeCCCCCCccccHHHHH
Q 019899 10 GQAVSFDPSQIVLTAGATPAVEILCFCLA-DHGNALLVPSPYYPGFDRDIRF---RTGVELIPVHCRSTDNFAFSITALD 85 (334)
Q Consensus 10 ~~~~~~~~~~i~~~~g~~~~~~~~~~~l~-~~gd~vl~~~p~~~~~~~~~~~---~~g~~v~~v~~~~~~~~~~~~~~l~ 85 (334)
++.++++.+++++++|+++++..++.++. .+||+|+++.+.|+++...++. ..|.+++.++++ .+ .+|+++++
T Consensus 122 a~l~g~~~~~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~--~~-~~d~~~l~ 198 (447)
T PRK00451 122 CELTGMDVANASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYE--DG-VTDLEALE 198 (447)
T ss_pred HHHhCCCcceEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCC--CC-CCCHHHHH
Confidence 44456778899999999999999988874 7899999999999998887662 268999999974 34 79999999
Q ss_pred HHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEE--eccccccccCCCCcchhhhhhhccccCC
Q 019899 86 QAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVIS--DEIYGGSIFGNEEFVSMAEILEAEEVDK 163 (334)
Q Consensus 86 ~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~--D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (334)
+++++ ++++|++++| ||||.+.+ +++|.++|+++|+++++ |.+... .+ ... . +.
T Consensus 199 ~~i~~------~t~~v~l~~p-n~tG~v~~---l~~I~~~a~~~~~~~iv~~d~~~~g-~~-----~~~---~-----~~ 254 (447)
T PRK00451 199 AAVDD------DTAAVVVQYP-NFFGVIED---LEEIAEIAHAGGALFIVGVDPVSLG-LL-----KPP---G-----EY 254 (447)
T ss_pred HhcCC------CeEEEEEECC-CCCCeeCC---HHHHHHHHHHCCCEEEEEcChHHhc-cC-----CCc---c-----cC
Confidence 99975 7899999999 89999988 99999999999999998 433211 00 000 1 14
Q ss_pred CcEEEEe---cccccCCCCCceEEEEeecCHHHHHHHH----------------------------HhhcccCCC--hHH
Q 019899 164 DRVHIIY---GLSKDLSLPGFRTGVIYSYNESVLAAAK----------------------------KLTRFCSIS--APT 210 (334)
Q Consensus 164 ~~~~~~~---s~sK~~~~~g~r~g~i~~~~~~~~~~~~----------------------------~~~~~~~~~--~~~ 210 (334)
+.++++. +++|.+++.|.++||+++ ++++.+.+. +.....+.. ...
T Consensus 255 ~~D~~~~s~~k~~~~~~~~Gpg~G~l~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (447)
T PRK00451 255 GADIVVGEGQPLGIPLSFGGPYLGFFAT-RKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQAL 333 (447)
T ss_pred CCCEEEECCCcCCCCCCCCCCCchHHHh-hHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHH
Confidence 5566666 566667677889999998 677766631 111111111 112
Q ss_pred H-HHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCceeEEe--eecCCcCCCCChhhHHHHHHHHH
Q 019899 211 Q-RLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSESSAGLYCW--ADMSGLIPSYSEKGELELWDKLL 286 (334)
Q Consensus 211 ~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~ll 286 (334)
+ .+++.+++.. .++.+++..+++.++++++.+.|++. |+++. .++++.+ ++++. +..++.++|+
T Consensus 334 ~~~aaa~~l~~~--~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~--~~~~~~~~~v~~~~--------~~~~~~~~L~ 401 (447)
T PRK00451 334 NALAAAIYMSLL--GPEGLRELAEQNHQKAHYLAERLAEIGGVELF--DGPFFNEFVVRLPK--------PAEEVNEALL 401 (447)
T ss_pred HHHHHHHHHHHH--CHHHHHHHHHHHHHHHHHHHHHHhhcCCEEec--CCCeEEEEEEecCC--------CHHHHHHHHH
Confidence 2 2222222211 13446778889999999999999987 57765 3344433 44431 2368888966
Q ss_pred HhcCeEE-cCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHH
Q 019899 287 NIAKINV-TPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVA 330 (334)
Q Consensus 287 ~~~gi~v-~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~ 330 (334)
+ +||.+ .++..+++..++++|++++. .++++++++++.|++++
T Consensus 402 ~-~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 402 E-KGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred h-cCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 6 56653 34555544345789999985 69999999999998865
No 171
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.94 E-value=1.3e-24 Score=198.12 Aligned_cols=300 Identities=17% Similarity=0.144 Sum_probs=197.6
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChhhhhhhccC------------cEEEEEe
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLA--DHGNALLVPSPYYPGFDRDIRFRTG------------VELIPVH 70 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~~g------------~~v~~v~ 70 (334)
+.+.+.+.++.+.+++++++|+++|+..++..+. .++++|++.+++|.+.........+ .+++.+|
T Consensus 84 l~~~l~~~~~~~~~~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (413)
T cd00610 84 LAELLLALTPEGLDKVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVP 163 (413)
T ss_pred HHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeC
Confidence 3344444455568899999999999999998873 5789999999999886544331222 2355665
Q ss_pred CCCC----CCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEEEEeccccccccC
Q 019899 71 CRST----DNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHVISDEIYGGSIFG 145 (334)
Q Consensus 71 ~~~~----~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~ 145 (334)
.++. ..+..|++.+++.+++. ..+++++++...++++|.+. +.+.+++|.++|++||+++|+||+|+++...
T Consensus 164 ~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~ 240 (413)
T cd00610 164 YPYRYRPPAELADDLEALEEALEEH---PEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRT 240 (413)
T ss_pred CCccccchhhHHHHHHHHHHHHhcC---CCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC
Confidence 4211 12445888898888642 12456455444477889877 6667999999999999999999999876443
Q ss_pred CCCcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHH--HHh--hcccCCChHHHHHHHHhhCCh
Q 019899 146 NEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAA--KKL--TRFCSISAPTQRLLISMLSDT 221 (334)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~l~~~ 221 (334)
+... .. .. .+....+.|+||+++ .|+|+||+++ ++++.+.+ ... ...++.+++.+.++.+.++..
T Consensus 241 g~~~-~~-~~-------~~~~~d~~t~sK~l~-~g~~~g~~~~-~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l 309 (413)
T cd00610 241 GKMF-AF-EH-------FGVEPDIVTLGKGLG-GGLPLGAVLG-REEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVL 309 (413)
T ss_pred cchh-hH-hh-------cCCCCCeEEEccccc-CccccEEEEE-cHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 3211 11 11 111112458899998 5899999998 78888886 222 234566777777776666432
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--cc--cCCCceeEEeeecCCcCCC--CChhhHHHHHHHHHHhcCeEEcC
Q 019899 222 KFIQEYLETNKRRIKKLYDSFVAGLKQLGI--RC--SESSAGLYCWADMSGLIPS--YSEKGELELWDKLLNIAKINVTP 295 (334)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~~--~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~gi~v~~ 295 (334)
++ ....++++++.+++.+.|++... .. .....|.++++.++..... ........+...|+ ++||.+.|
T Consensus 310 ---~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gv~v~~ 383 (413)
T cd00610 310 ---EE--EGLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAAL-ERGLLLRP 383 (413)
T ss_pred ---Hh--ccHHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHH-HCCeEEee
Confidence 11 23455666667777777765421 21 1233567777877643110 01123456777755 57999998
Q ss_pred CCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHH
Q 019899 296 GSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVA 330 (334)
Q Consensus 296 g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~ 330 (334)
+. .+.+|++++. .++++++++++++.+++
T Consensus 384 ~~------~~~lR~~~~~~~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 384 SG------GNVIRLLPPLIITEEEIDEGLDALDEAL 413 (413)
T ss_pred cC------CCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 75 4679999885 58999999999998763
No 172
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.94 E-value=2.1e-24 Score=192.00 Aligned_cols=270 Identities=16% Similarity=0.201 Sum_probs=183.1
Q ss_pred CCcEEEecCcHHHHHHHHHHhcCCCC---------------eEEecCCCCCChh----hhhhhccCcEEEEEeCCCCCCc
Q 019899 17 PSQIVLTAGATPAVEILCFCLADHGN---------------ALLVPSPYYPGFD----RDIRFRTGVELIPVHCRSTDNF 77 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~~~gd---------------~vl~~~p~~~~~~----~~~~~~~g~~v~~v~~~~~~~~ 77 (334)
.+++++|+|+|+|+++++.+++++|| +|+++.|.|..+. ..+. ..|.+++.++. .+
T Consensus 60 ~~~~~~~~g~t~al~~al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~-~~g~~~v~v~~----~~ 134 (363)
T TIGR01437 60 VEDAVIVSSASAGIAQSVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVR-LGGGKVVEAGY----AN 134 (363)
T ss_pred CCeEEEEcCHHHHHHHHHHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHH-hcCCeEEEEcC----CC
Confidence 45899999999999999999999998 8999998887663 4455 78999999985 23
Q ss_pred cccHHHHHHHHHHHHHcCCceeEEE-EeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhh
Q 019899 78 AFSITALDQAFNQARKRGVKVRGIL-ICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEIL 156 (334)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~~~~~~i~-~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~ 156 (334)
.+|++++++++++ ++++++ +++|+||+|.+.| +++|.++|++||+++++|++|+. .+....
T Consensus 135 ~~d~~~le~ai~~------~t~ai~~v~~~~~~~g~~~~---~~~i~~~a~~~gi~vivD~a~~~---------~~~~~~ 196 (363)
T TIGR01437 135 ECSAEQLEAAITE------KTAAILYIKSHHCVQKSMLS---VEDAAQVAQEHNLPLIVDAAAEE---------DLQKYY 196 (363)
T ss_pred CCCHHHHHHhcCh------hceEEEEEecCCCCcCCcCC---HHHHHHHHHHcCCeEEEECCCCC---------chHHHH
Confidence 6999999999987 778766 5677999999999 88899999999999999999862 111111
Q ss_pred hccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc----cCCChHHHHHHHHhhCChHHHHHHHHHHH
Q 019899 157 EAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF----CSISAPTQRLLISMLSDTKFIQEYLETNK 232 (334)
Q Consensus 157 ~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 232 (334)
. .+.++++.|+||++ +|.+.|+++. ++++++.++..... +........++..++.. +.++..+..
T Consensus 197 ~-----~g~D~~~~S~~K~l--~gp~~G~l~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~---~~~~~~~~~ 265 (363)
T TIGR01437 197 R-----LGADLVIYSGAKAI--EGPTSGLVLG-KKKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQ---YLSTGKESG 265 (363)
T ss_pred H-----cCCCEEEEeCCccc--CCCceEEEEE-cHHHHHHHHhccCCCcceeccCHHHHHHHHHHHHH---HHccCcccH
Confidence 1 34567889999987 5667999997 77777766432221 11112222233333221 111112233
Q ss_pred HHHHHHHHHHHHHHHhC-CCcccCC--Ccee-----EEeeecCCcCCCCChhhHHHHHHHHHHhcC--eEEcCCCCcCCC
Q 019899 233 RRIKKLYDSFVAGLKQL-GIRCSES--SAGL-----YCWADMSGLIPSYSEKGELELWDKLLNIAK--INVTPGSACHCI 302 (334)
Q Consensus 233 ~~~~~~~~~~~~~l~~~-g~~~~~~--~~g~-----~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g--i~v~~g~~~~~~ 302 (334)
+...++++.+.+.|++. |+.+..+ ..+. .+.++... ...+..++.+. |++.+ |.+++ ++.
T Consensus 266 ~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~~~-----~g~~~~~l~~~-L~~~~~~I~~r~--~~~-- 335 (363)
T TIGR01437 266 AEMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDESE-----LGMTAADVVQA-LRQGEPAIYTRG--YKA-- 335 (363)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEeccC-----CCCCHHHHHHH-HhcCCCCEEEee--eee--
Confidence 34445677899999887 7776532 1111 11122211 11245688888 55466 66654 232
Q ss_pred CCCeEEEEecCCCcccHHHHHHHHHHHH
Q 019899 303 EPGWFRCCFTSLTHEDIPLVIERIQKVA 330 (334)
Q Consensus 303 ~~~~iRi~~~~~~~~~l~~~l~~l~~~~ 330 (334)
..+.+|+++...+++|++.++++|.+++
T Consensus 336 ~~~~~~l~~~~~~~~e~~~~~~~l~~~~ 363 (363)
T TIGR01437 336 NEGIIEIDPRSVTGGQLDIIVERIREIV 363 (363)
T ss_pred cCCeEEEEeecCCHHHHHHHHHHHHHhC
Confidence 3578999988778999999999998763
No 173
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.94 E-value=3.9e-24 Score=191.03 Aligned_cols=282 Identities=16% Similarity=0.174 Sum_probs=187.9
Q ss_pred hhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhc---cCcEEEEEeCCCCCCcccc
Q 019899 4 FMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFR---TGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~---~g~~v~~v~~~~~~~~~~~ 80 (334)
.+++.++...+ .+++++++|+++|+..++.+++++||+|+++.|+|++....+... .+.++..++ ..|
T Consensus 55 ~le~~lA~l~g--~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d-------~~d 125 (382)
T TIGR02080 55 LLQQALAELEG--GAGAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVD-------QGD 125 (382)
T ss_pred HHHHHHHHHhC--CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEEC-------CCC
Confidence 34444554443 478999999999999999999999999999999999766654412 245555443 137
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++ ++++|++++|+||||.+.| +++|.++|+++|+++++|++|..+... .++ .
T Consensus 126 ~~~l~~ai~~------~tklV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~----~pl-~------ 185 (382)
T TIGR02080 126 EQALRAALAQ------KPKLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLSPALQ----NPL-A------ 185 (382)
T ss_pred HHHHHHhcCc------CceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCcccccC----Cch-h------
Confidence 8999999876 7899999999999999999 888999999999999999999753321 111 1
Q ss_pred cCCCcEEEEecccccCC-CCCceEEEEeecCHHHHHHHHHhhccc--CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLS-LPGFRTGVIYSYNESVLAAAKKLTRFC--SISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~-~~g~r~g~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
.+.+++++|+||.++ .++++.|++++.++++.+.++...... ..++.....+..-++ .+..+.++..+
T Consensus 186 --~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l~-------tl~~R~~~~~~ 256 (382)
T TIGR02080 186 --LGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVTGGAFDSYLTLRGLR-------TLVARMRLQQR 256 (382)
T ss_pred --hCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCCCCHHHHHHHHcccc-------hHHHHHHHHHH
Confidence 234588899999995 568899999887888888887655543 344444433322222 22333556668
Q ss_pred HHHHHHHHHHhCC-Cc---cc----C----------CCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCc
Q 019899 238 LYDSFVAGLKQLG-IR---CS----E----------SSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSAC 299 (334)
Q Consensus 238 ~~~~~~~~l~~~g-~~---~~----~----------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~ 299 (334)
++..+.+.|+.+. ++ +. . ...|-.+.+++... ......+.+. ++-.++.+.-|...
T Consensus 257 na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~-----~~~~~~f~~~-l~~~~~~~s~G~~~ 330 (382)
T TIGR02080 257 NAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGG-----EQTVRRFLGG-LSLFTLAESLGGVE 330 (382)
T ss_pred HHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCc-----HHHHHHHHHc-CCcceEeccCCCCc
Confidence 8888888888752 21 11 0 01222455666421 1122334444 33233333223211
Q ss_pred C----------C-----------CCCCeEEEEecCCCcccHHHHHHHHHHHHHH
Q 019899 300 H----------C-----------IEPGWFRCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 300 ~----------~-----------~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
. . ..++-+|+|++ -|+.+++++.|.+++++
T Consensus 331 sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvG---lE~~~dl~~dl~~al~~ 381 (382)
T TIGR02080 331 SLIAHPATMTHAAMGPEARAEAGISDTLLRLSVG---LEDADDLIADLEQGLRA 381 (382)
T ss_pred ceeECCCccCcccCCHHHHHhcCCCcCeEEEEec---cCCHHHHHHHHHHHHhh
Confidence 0 0 01357999999 77888899999988864
No 174
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.93 E-value=2.9e-25 Score=197.99 Aligned_cols=277 Identities=16% Similarity=0.184 Sum_probs=195.5
Q ss_pred hhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc----CCC-CeEEecCCCCCChhhhhhh--ccCcEEEEEeCCCCCC
Q 019899 4 FMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLA----DHG-NALLVPSPYYPGFDRDIRF--RTGVELIPVHCRSTDN 76 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~----~~g-d~vl~~~p~~~~~~~~~~~--~~g~~v~~v~~~~~~~ 76 (334)
.+++.+++.+++++++|++++|++++++.++.++. .+| +.|+++...|+++...+.. ..|.+++.++++ .+
T Consensus 46 ~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~--~~ 123 (353)
T TIGR03235 46 RARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVD--ES 123 (353)
T ss_pred HHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccC--CC
Confidence 34556667777888999999999999999988875 355 7899988888876655431 468999999974 45
Q ss_pred ccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhh
Q 019899 77 FAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEIL 156 (334)
Q Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~ 156 (334)
+.+|++++++++++ +++++++++++||||.+.| +++|.++|+++|+++++|++++.... ..++.
T Consensus 124 ~~~d~~~l~~~l~~------~~~lv~~~~~~n~tG~~~~---~~~I~~l~~~~~~~~ivD~a~~~g~~----~~~~~--- 187 (353)
T TIGR03235 124 GRIDVDELADAIRP------DTLLVSIMHVNNETGSIQP---IREIAEVLEAHEAFFHVDAAQVVGKI----TVDLS--- 187 (353)
T ss_pred CcCCHHHHHHhCCC------CCEEEEEEcccCCceeccC---HHHHHHHHHHcCCEEEEEchhhcCCc----ccccc---
Confidence 67899999998865 7899999999999999999 89999999999999999999875222 12221
Q ss_pred hccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHH--HHHh---------hcccCCChHHHHHHHHhhCChHHHH
Q 019899 157 EAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAA--AKKL---------TRFCSISAPTQRLLISMLSDTKFIQ 225 (334)
Q Consensus 157 ~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~--~~~~---------~~~~~~~~~~~~~~~~~l~~~~~~~ 225 (334)
. .+.++++.|.+|++|++| +|+++. +++.... ++.. ...++.+.....++..+++. +.
T Consensus 188 ~-----~~~D~~~~s~~K~~gp~g--~g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~---~~ 256 (353)
T TIGR03235 188 A-----DRIDLISCSGHKIYGPKG--IGALVI-RKRGKPKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEI---AR 256 (353)
T ss_pred c-----cCCCEEEeehhhcCCCCc--eEEEEE-ccCcccccccCceeeCCCCcCccccCCCChHHHHHHHHHHHH---HH
Confidence 1 466788889999877555 788888 4443211 1110 11234555566666666543 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCce---eEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC
Q 019899 226 EYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAG---LYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI 302 (334)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~ 302 (334)
+..++..++++++.+++.+.|++.|+++..++.. .++.+.++. .+..++... |++ +|.+.+|..|+..
T Consensus 257 ~~~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~~~~~-------~~~~~v~~~-L~~-~i~v~~g~~~~~~ 327 (353)
T TIGR03235 257 RNAQAWEVKLRAMRNQLRDALQTLGVKLNGDPAETIPHILNFSIDG-------VNSEALIVN-LRA-DAAVSTGSACSSS 327 (353)
T ss_pred hhHHHHHHHHHHHHHHHHHHhccCCeEEeCCcccccCCEEEEEeCC-------cCHHHHHHH-HhC-CeEEEchhhcCCC
Confidence 3456778899999999999998888887643321 123334342 133566667 564 8999999998764
Q ss_pred C--CCeEEEEecCCCcccH
Q 019899 303 E--PGWFRCCFTSLTHEDI 319 (334)
Q Consensus 303 ~--~~~iRi~~~~~~~~~l 319 (334)
. +.++|.+++ .+++.+
T Consensus 328 ~~~~~~~l~~~g-~~~~~~ 345 (353)
T TIGR03235 328 KYEPSHVLQAMG-LDTDRA 345 (353)
T ss_pred CCCCCHHHHHcC-CCHHHh
Confidence 3 346777877 554443
No 175
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=9.8e-24 Score=188.57 Aligned_cols=208 Identities=17% Similarity=0.194 Sum_probs=157.0
Q ss_pred hhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhc---cCcEEEEEeCCCCCCcccc
Q 019899 4 FMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFR---TGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~---~g~~v~~v~~~~~~~~~~~ 80 (334)
.++++++...+ .+++++++|+++++..++.+++++||+|++++|+|++....+... .|.++..++ ..|
T Consensus 56 ~L~~~lA~l~g--~~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd-------~~d 126 (386)
T PRK08045 56 VVQRALAELEG--GAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD-------QGD 126 (386)
T ss_pred HHHHHHHHHhC--CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeC-------CCC
Confidence 34445554444 357999999999999999999999999999999999755544312 344665554 257
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++ ++++|++++|+||||.++| +++|.++|+++|+++++|++|..... ..++ .
T Consensus 127 ~e~l~~~l~~------~tklV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~~~~----~~pl----~--- 186 (386)
T PRK08045 127 EQALRAALAE------KPKLVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLSPAL----QNPL----A--- 186 (386)
T ss_pred HHHHHHhccc------CCeEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCcccc----CCch----h---
Confidence 8999998875 7899999999999999999 88889999999999999999975322 1111 1
Q ss_pred cCCCcEEEEecccccCC-CCCceEEEEeecCHHHHHHHHHhhccc--CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLS-LPGFRTGVIYSYNESVLAAAKKLTRFC--SISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~-~~g~r~g~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
.+.+++++|++|+++ .++...|++++.++++.+.++...... ..++..+..+...++. +..+.+++.+
T Consensus 187 --~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~t-------l~~R~~~~~~ 257 (386)
T PRK08045 187 --LGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRT-------LVPRMELAQR 257 (386)
T ss_pred --hCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhcc-------HHHHHHHHHH
Confidence 344688999999994 566889999886788888776554433 4566777766666655 3456677788
Q ss_pred HHHHHHHHHHhC
Q 019899 238 LYDSFVAGLKQL 249 (334)
Q Consensus 238 ~~~~~~~~l~~~ 249 (334)
++..+.+.|+++
T Consensus 258 na~~la~~L~~~ 269 (386)
T PRK08045 258 NAQAIVKYLQTQ 269 (386)
T ss_pred HHHHHHHHHHcC
Confidence 888888888876
No 176
>PRK06460 hypothetical protein; Provisional
Probab=99.93 E-value=2.5e-23 Score=185.79 Aligned_cols=208 Identities=15% Similarity=0.174 Sum_probs=147.5
Q ss_pred hhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCC----hhhhhhhccCcEEEEEeCCCCCCccc
Q 019899 4 FMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPG----FDRDIRFRTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~----~~~~~~~~~g~~v~~v~~~~~~~~~~ 79 (334)
-+++.++...+.+. .+ +++++++++..++.+++++||+|+++.|.|++ +...++ ..|.++..++..
T Consensus 49 ~L~~~lA~l~g~~~-~v-~~~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~-~~G~~v~~~~~~------- 118 (376)
T PRK06460 49 ELTKKIVELENAEM-GV-AFSSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLK-NWGVNVDASNPG------- 118 (376)
T ss_pred HHHHHHHHHhCCCc-EE-EeCCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHH-hhCcEEEEECCC-------
Confidence 45555666555533 34 44666789999999999999999999877654 334555 689998888752
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
+.+.+++.+++ ++++|++++|+||||.++| +++|.++|+++|+++++|++|+... ....+
T Consensus 119 ~~~~l~~~~~~------~tklV~l~sp~NPtG~v~d---~~~I~~la~~~g~~vivDea~~~~~-------~~~~l---- 178 (376)
T PRK06460 119 SDNIIEKAKSK------RYDVVFVENITNPLLRVVD---ITELSKVCKENGSILIVDATFSTPI-------NQKPL---- 178 (376)
T ss_pred CHHHHHHhcCC------CceEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCcCccc-------cCChh----
Confidence 12333333332 7899999999999999999 7788999999999999999987421 11111
Q ss_pred ccCCCcEEEEecccccCCCC-CceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 160 EVDKDRVHIIYGLSKDLSLP-GFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~-g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
+.+.++++.|+||+++.. +.+.||+++ ++++++.+++....++.+... ..+..+++.. +++..+.+++.++
T Consensus 179 --~~~~divv~S~sK~l~G~~~~~~G~~~~-~~~l~~~l~~~~~~~g~~~~~-~~a~~~l~~~----~~l~~r~~~~~~n 250 (376)
T PRK06460 179 --ELGADIVVHSASKFLAGHNDVIAGLAAG-YGKLLNVIDQMRRTLGTSLDP-HAAYLTLRGI----KTLKIRMDVINRN 250 (376)
T ss_pred --hcCCCEEEeecceeccCCCCceEEEEec-CHHHHHHHHHHHHhcCCCCCH-HHHHHHHhch----hhHHHHHHHHHHH
Confidence 145678999999998523 478999998 888989888766655544322 2333333433 3345667778889
Q ss_pred HHHHHHHHHhC
Q 019899 239 YDSFVAGLKQL 249 (334)
Q Consensus 239 ~~~~~~~l~~~ 249 (334)
++++.+.|+++
T Consensus 251 ~~~l~~~L~~~ 261 (376)
T PRK06460 251 AEQIAEFLEGH 261 (376)
T ss_pred HHHHHHHHHcC
Confidence 99999999876
No 177
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.93 E-value=5.6e-24 Score=192.64 Aligned_cols=274 Identities=15% Similarity=0.191 Sum_probs=191.8
Q ss_pred CCcEEEecCcHHHHHHHHHHhc--------CCCCeEEecCCCCCChhh-hhhhccC------------cEEEEEeCCCCC
Q 019899 17 PSQIVLTAGATPAVEILCFCLA--------DHGNALLVPSPYYPGFDR-DIRFRTG------------VELIPVHCRSTD 75 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~--------~~gd~vl~~~p~~~~~~~-~~~~~~g------------~~v~~v~~~~~~ 75 (334)
.+.+++++++++|+..++.... ...++|+..+.+|.+... .+. ..+ .+++.++
T Consensus 97 ~~~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----- 170 (403)
T PRK05093 97 AERVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVS-VGGQPKYSDGFGPKPADITHVP----- 170 (403)
T ss_pred CCEEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHh-hcCChhhhhcCCCCCCCcEEeC-----
Confidence 4699999999999999988641 123567777776665432 222 111 1223332
Q ss_pred CccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCC--CHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhh
Q 019899 76 NFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNII--PRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMA 153 (334)
Q Consensus 76 ~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~--~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~ 153 (334)
..|++.+++.+.+ ++++|++. |.||+|-++ +.+.+++|.++|++||+++|+||+|.++.+.|... +..
T Consensus 171 --~~d~~~l~~~l~~------~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~-~~~ 240 (403)
T PRK05093 171 --FNDLAAVKAVIDD------HTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLF-AYM 240 (403)
T ss_pred --CCCHHHHHHHhcC------CeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccch-hhh
Confidence 1278889888864 67766666 877776655 88999999999999999999999999876665422 111
Q ss_pred hhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh--hcccCCChHHHHHHHHhhCChHHHHHHHHHH
Q 019899 154 EILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL--TRFCSISAPTQRLLISMLSDTKFIQEYLETN 231 (334)
Q Consensus 154 ~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 231 (334)
.. +..++ +.|+||+++ +|+|+||+++ ++++.+.+... ...++.+++.|.++.+.++... . .+.
T Consensus 241 ~~----~~~pd----i~s~sK~l~-~G~rig~vv~-~~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~---~--~~~ 305 (403)
T PRK05093 241 HY----GVTPD----ILTSAKALG-GGFPIGAMLT-TAEIASHFKVGTHGSTYGGNPLACAVAEAVFDIIN---T--PEV 305 (403)
T ss_pred hc----CCCCC----EEEeccccc-CCcceEEEEE-cHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh---h--ccH
Confidence 11 11122 568999999 9999999999 78888887642 3345678888988888764321 1 234
Q ss_pred HHHHHHHHHHHHHHHHhCCCc----ccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeE
Q 019899 232 KRRIKKLYDSFVAGLKQLGIR----CSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWF 307 (334)
Q Consensus 232 ~~~~~~~~~~~~~~l~~~g~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~i 307 (334)
.++++++.+++.+.|++.+.. ...+..|+++|+.++.... .+..+++..+++ +||.+.|+. ++++
T Consensus 306 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~~----~~~~~~~~~l~~-~Gv~v~~~g------~~~l 374 (403)
T PRK05093 306 LEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQYK----GRARDFLNAAAE-EGVMVLVAG------PDVL 374 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcch----hHHHHHHHHHHH-CCeEEecCC------CCEE
Confidence 567888888888888876322 1233568889998865321 134578888666 799998742 4689
Q ss_pred EEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 308 RCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 308 Ri~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
|++++. .+++++++++++|.+++++
T Consensus 375 Rl~~~~~~~~~~i~~~~~~l~~~l~~ 400 (403)
T PRK05093 375 RFAPSLVIEEADIDEGLARFEKAVAK 400 (403)
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 998775 5999999999999998865
No 178
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.93 E-value=2.3e-23 Score=186.17 Aligned_cols=208 Identities=15% Similarity=0.199 Sum_probs=155.5
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhh---hccCcEEEEEeCCCCCCccccH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIR---FRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~---~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
+.++++...+ .++.++++++++|+..++.+++++||+|+++.++|.+....+. ...|.++..++.. |+
T Consensus 45 le~~la~l~g--~~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-------d~ 115 (369)
T cd00614 45 LEKKLAALEG--GEAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDPD-------DP 115 (369)
T ss_pred HHHHHHHHHC--CCCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeCCC-------CH
Confidence 3444444333 3578888999999999999999999999999999998765432 1568888888742 58
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
+++++++++ ++++|++.+|+||+|.+.| +++|+++|+++|+++++|++|+...+. ..+ .
T Consensus 116 ~~l~~~i~~------~~~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~-------~~~-~---- 174 (369)
T cd00614 116 EALEAAIKP------ETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQ-------RPL-E---- 174 (369)
T ss_pred HHHHHhcCC------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcC-------Chh-h----
Confidence 889888875 7899999999999999999 899999999999999999998753321 111 1
Q ss_pred CCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHHhhcc--cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 162 DKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKKLTRF--CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
.+.++++.|++|.++.+| .+.|+++++++++.+.++..... ...++....++...++. +..+.++..++
T Consensus 175 -~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~t-------l~~r~~~~~~n 246 (369)
T cd00614 175 -LGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLKT-------LPLRMERHSEN 246 (369)
T ss_pred -hCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCC-------HHHHHHHHHHH
Confidence 456788999999997565 78999998554888888765543 33455554444444433 23345667788
Q ss_pred HHHHHHHHHhCC
Q 019899 239 YDSFVAGLKQLG 250 (334)
Q Consensus 239 ~~~~~~~l~~~g 250 (334)
++++.+.|++++
T Consensus 247 a~~la~~L~~~~ 258 (369)
T cd00614 247 ALKVAEFLEKHP 258 (369)
T ss_pred HHHHHHHHHcCC
Confidence 888888888874
No 179
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=1.7e-23 Score=188.01 Aligned_cols=207 Identities=18% Similarity=0.162 Sum_probs=152.5
Q ss_pred hhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhh----hhhhccCcEEEEEeCCCCCCccc
Q 019899 4 FMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDR----DIRFRTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~~g~~v~~v~~~~~~~~~~ 79 (334)
.+.++++...+. ++.++++++++++..++.+++++||+|+++.|+|++... .+. ..|.+++.++. .
T Consensus 64 ~Le~~lA~l~g~--~~~v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~-~~g~~v~~v~~-------~ 133 (405)
T PRK08776 64 LLGEALAELEGG--AGGVITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAK-KGHFALITADL-------T 133 (405)
T ss_pred HHHHHHHHHhCC--CceEEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHH-hcCcEEEEECC-------C
Confidence 455556555543 344566666899999999999999999999999997433 333 46788888774 3
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
|++++++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|.... ...++ .
T Consensus 134 d~~~l~~~i~~------~tklV~l~~P~NPtG~v~d---l~~I~~la~~~gi~vIvD~a~a~~~----~~~pl----~-- 194 (405)
T PRK08776 134 DPRSLADALAQ------SPKLVLIETPSNPLLRITD---LRFVIEAAHKVGALTVVDNTFLSPA----LQKPL----E-- 194 (405)
T ss_pred CHHHHHHhcCc------CCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCCcccc----cCCcc----c--
Confidence 78889988875 7899999999999999988 9999999999999999999997421 11111 1
Q ss_pred ccCCCcEEEEecccccCCCC-CceEEEEeecCHHHHHHHHHhhcc--cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHH
Q 019899 160 EVDKDRVHIIYGLSKDLSLP-GFRTGVIYSYNESVLAAAKKLTRF--CSISAPTQRLLISMLSDTKFIQEYLETNKRRIK 236 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~-g~r~g~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 236 (334)
.+.++++.|++|.++.+ ++..|+++++++++.+++...... ...++.....+...+ +++..+.++..
T Consensus 195 ---~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~~s~~~a~l~~~gl-------~tl~~r~~~~~ 264 (405)
T PRK08776 195 ---FGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLTGSPFDAFLTLRGL-------RTLDARLRVHQ 264 (405)
T ss_pred ---ccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhh-------CcHHHHHHHHH
Confidence 34458889999999644 577899888778888877654433 234555555444333 23455677788
Q ss_pred HHHHHHHHHHHhC
Q 019899 237 KLYDSFVAGLKQL 249 (334)
Q Consensus 237 ~~~~~~~~~l~~~ 249 (334)
+++..+.+.|+++
T Consensus 265 ~na~~la~~L~~~ 277 (405)
T PRK08776 265 ENADAIAALLDGH 277 (405)
T ss_pred HHHHHHHHHHHcC
Confidence 8888888888876
No 180
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.93 E-value=6.2e-24 Score=191.92 Aligned_cols=269 Identities=17% Similarity=0.168 Sum_probs=187.2
Q ss_pred CCcEEEecCcHHHHHHHHHHhc----------CCCCeEEecCCCCCChh-hhhhhccCcE------------EEEEeCCC
Q 019899 17 PSQIVLTAGATPAVEILCFCLA----------DHGNALLVPSPYYPGFD-RDIRFRTGVE------------LIPVHCRS 73 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~----------~~gd~vl~~~p~~~~~~-~~~~~~~g~~------------v~~v~~~~ 73 (334)
.+.+++++++++|+..++.... ..+++|+....+|.+.. ..+. ..+.. +..++.
T Consensus 97 ~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-- 173 (396)
T PRK04073 97 KDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVS-LSSEEEYKRGFGPMLPGIKKIPY-- 173 (396)
T ss_pred CCeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHh-hcCCcccccCCCCCCCCceEeCC--
Confidence 4689999999999999888652 12367888777666543 3333 22211 122221
Q ss_pred CCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHH-HHHHHHHHHHhcCcEEEEeccccccccCCCCcchh
Q 019899 74 TDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRE-TLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSM 152 (334)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~-~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~ 152 (334)
.|++++++++++ ++++|++..++||+|.+++.+ .+++|.++|++||+++|+||+|.++.+.+..+.
T Consensus 174 -----~d~~~l~~~i~~------~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~-- 240 (396)
T PRK04073 174 -----GDLEALKAAITP------NTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFA-- 240 (396)
T ss_pred -----CCHHHHHHhccc------CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHH--
Confidence 268888888865 788888887799999998765 599999999999999999999998655443211
Q ss_pred hhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHH--hhcccCCChHHHHHHHHhhCChHHHHHHHHH
Q 019899 153 AEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKK--LTRFCSISAPTQRLLISMLSDTKFIQEYLET 230 (334)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 230 (334)
... .+....+.++||.+|.+|+|+||+++ ++++.+.+.. ....++.+++.+.++.+.++..+ + ..
T Consensus 241 ~~~-------~~~~pdi~~~sK~lg~gg~~ig~~~~-~~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~--~---~~ 307 (396)
T PRK04073 241 CDW-------DNVTPDMYILGKALGGGVFPISCVAA-NRDILGVFTPGSHGSTFGGNPLACAVSIAALEVLE--E---EK 307 (396)
T ss_pred hhh-------cCCCCCEEEecccccCCCCcceEEEE-cHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHH--h---cC
Confidence 111 11111234689999977899999998 8888888764 33456778888888888875321 1 12
Q ss_pred HHHHHHHHHHHHHHHHHhCCC---cccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeE
Q 019899 231 NKRRIKKLYDSFVAGLKQLGI---RCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWF 307 (334)
Q Consensus 231 ~~~~~~~~~~~~~~~l~~~g~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~i 307 (334)
..++.+++.+++.+.|++++. ....+ .|.+++++++. ++.++...|+ ++||.+.+.. ++++
T Consensus 308 l~~~~~~~~~~l~~~L~~l~~~~i~~~~~-~g~~~~~~~~~--------~~~~~~~~l~-~~Gv~~~~~~------~~~i 371 (396)
T PRK04073 308 LPERSLELGEYFKEQLKEIDNPMIKEVRG-RGLFIGVELNE--------PARPYCEALK-EEGLLCKETH------ETVI 371 (396)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCcccceec-ceEEEEEEecc--------hHHHHHHHHH-HCCeEEecCC------CCEE
Confidence 334556667888888877532 22233 35667787753 2357788855 4899987631 4689
Q ss_pred EEEecC-CCcccHHHHHHHHHHHH
Q 019899 308 RCCFTS-LTHEDIPLVIERIQKVA 330 (334)
Q Consensus 308 Ri~~~~-~~~~~l~~~l~~l~~~~ 330 (334)
|++++. .+++++++++++|++++
T Consensus 372 Ri~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 372 RFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred EEECCcccCHHHHHHHHHHHHHHh
Confidence 999763 69999999999999876
No 181
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.93 E-value=6.6e-24 Score=190.40 Aligned_cols=279 Identities=13% Similarity=0.150 Sum_probs=189.4
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhh---ccCcEEEEEeCCCCCCccccH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRF---RTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~---~~g~~v~~v~~~~~~~~~~~~ 81 (334)
+.+.++...+ .++.+++++++.++..++.+++++||+|+++.|.|++....+.. ..|.++..++. .|+
T Consensus 66 Le~~lA~l~G--~~~al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~-------~d~ 136 (386)
T PRK06767 66 FEERMAVLEG--GEEALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDM-------ETE 136 (386)
T ss_pred HHHHHHHHhC--CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCC-------CCH
Confidence 4444554444 34566677778899999999999999999999999877665441 24565555543 378
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
+++++++++ ++++|++++|+||||.+.| +++|.++|+++|+++++|++|+...+. .++
T Consensus 137 ~~l~~~i~~------~tklV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~----~pl--------- 194 (386)
T PRK06767 137 ADIENKIRP------NTKLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSPYLQ----RPL--------- 194 (386)
T ss_pred HHHHHhhCc------CceEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCcccccC----Cch---------
Confidence 899988875 7899999999999999999 889999999999999999998642221 111
Q ss_pred CCCcEEEEecccccCCCCCceE-EEEeecCHHHHHHHH-Hhhccc--CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRT-GVIYSYNESVLAAAK-KLTRFC--SISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~-g~i~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
..+.++++.|++|.++.+|.++ |++++ +++.++.+. ...... ..++..+..+...++. +..+.++..+
T Consensus 195 ~~g~Div~~S~sK~l~g~g~~~gG~v~~-~~~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~t-------l~~r~~~~~~ 266 (386)
T PRK06767 195 ELGCDAVVHSATKYIGGHGDVVAGVTIC-KTRALAEKIRPMRKDIGGIMAPFDAWLLLRGLKT-------LAVRMDRHCD 266 (386)
T ss_pred hcCCcEEEecCcceecCCCCceeEEEEe-ChHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCc-------HHHHHHHHHH
Confidence 1355688899999998788775 88887 666655543 332222 2344433333333332 2334566788
Q ss_pred HHHHHHHHHHhC-CCcccC------------CCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCC---
Q 019899 238 LYDSFVAGLKQL-GIRCSE------------SSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHC--- 301 (334)
Q Consensus 238 ~~~~~~~~l~~~-g~~~~~------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--- 301 (334)
++..+.+.|+++ +++.+. ..+|+ +.+++... .++...+.+. ++..++.+.-|.....
T Consensus 267 ~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~-vsf~l~~~-----~~~~~~f~~~-l~~~~~~~s~G~~~sl~~~ 339 (386)
T PRK06767 267 NAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGV-ISFSIKGG-----KEETQAFIND-LHFITIAVSLGDTETLIQH 339 (386)
T ss_pred HHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCce-EEEEEcCC-----HHHHHHHHHh-CCccEEecCCCCcCccccC
Confidence 888899999887 555221 23344 44566421 2345567777 5667776655543211
Q ss_pred ------------------CCCCeEEEEecCCCcccHHHHHHHHHHHHHH
Q 019899 302 ------------------IEPGWFRCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 302 ------------------~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
..++-+|+|++ -|+.+.+++.|.+++++
T Consensus 340 p~~~~~~~~~~~~~~~~gi~~~l~R~svG---lE~~~dl~~dl~~al~~ 385 (386)
T PRK06767 340 PATMTHAAIPAELRQEMGIYDNLIRLSVG---LESWEDIVSDLEQALKK 385 (386)
T ss_pred CCccccccCCHHHHHhcCCCCCeEEEEec---cCCHHHHHHHHHHHHhh
Confidence 01357999999 77888899999988864
No 182
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.93 E-value=3.9e-23 Score=185.40 Aligned_cols=205 Identities=14% Similarity=0.163 Sum_probs=148.8
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhh----hhhccCcEEEEEeCCCCCCcccc
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRD----IRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
+++.++...+ .+++++++|+++|+..++.+++++||+|+++.+.|++.... +. ..|.+++.+++. |
T Consensus 66 le~~la~l~g--~~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~-~~G~~v~~vd~~-------d 135 (390)
T PRK08133 66 FQERLAALEG--AEACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFA-RFGIETTFVDLT-------D 135 (390)
T ss_pred HHHHHHHHhC--CCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHH-HcCcEEEEECCC-------C
Confidence 4455554444 45789999999999999999999999999999999876653 34 579999999852 6
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
.+++++++++ ++++|++++|+||+|.+.+ +++|+++|+++|+++|+|++|...... .++ .
T Consensus 136 ~~~l~~~i~~------~tklV~ie~p~NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~~----~pl----~--- 195 (390)
T PRK08133 136 LDAWRAAVRP------NTKLFFLETPSNPLTELAD---IAALAEIAHAAGALLVVDNCFCTPALQ----QPL----K--- 195 (390)
T ss_pred HHHHHHhcCc------CCeEEEEECCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCCcccccC----Cch----h---
Confidence 8889988876 7899999999999999999 899999999999999999998643221 111 1
Q ss_pred cCCCcEEEEecccccCCCCCceEE-EEeecCHHHHHHHHHhhcccC--CChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTG-VIYSYNESVLAAAKKLTRFCS--ISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g-~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
.+.+++++|+||+++.+|.++| +++. +++.++.+.......+ .++.. +..++...+ .+..+.++..+
T Consensus 196 --~g~Divv~S~sK~~~g~g~~~GG~vv~-~~~~~~~~~~~~~~~g~~~~~~~---a~~~l~gl~----tl~~R~~~~~~ 265 (390)
T PRK08133 196 --LGADVVIHSATKYLDGQGRVLGGAVVG-SKELMEEVFGFLRTAGPTLSPFN---AWVFLKGLE----TLSLRMEAHSA 265 (390)
T ss_pred --hCCcEEEeecceeecCCcceEeEEEEc-CHHHHHHHHHHHHHhCCCCCHHH---HHHHHcccc----hHHHHHHHHHH
Confidence 3456889999999987888874 5555 6776666654433322 23333 223333322 22334445556
Q ss_pred HHHHHHHHHHhC
Q 019899 238 LYDSFVAGLKQL 249 (334)
Q Consensus 238 ~~~~~~~~l~~~ 249 (334)
++..+.+.|+++
T Consensus 266 ~a~~la~~L~~~ 277 (390)
T PRK08133 266 NALALAEWLEAH 277 (390)
T ss_pred HHHHHHHHHHhC
Confidence 777888888776
No 183
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.93 E-value=2.7e-23 Score=186.74 Aligned_cols=302 Identities=13% Similarity=0.123 Sum_probs=192.3
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITAL 84 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l 84 (334)
+.++++..++. ++.++.++++.++..++.+++++||.|+++++.|+++...+. ..+.++++++. .|++++
T Consensus 48 LE~~lA~~~g~--e~al~~~sG~~a~~~~i~~l~~~GD~Vl~~~~~h~s~~~~~~-l~~~~~~~~~~-------~d~~~l 117 (392)
T PLN03227 48 LEQCMAEFLGT--ESAILYSDGASTTSSTVAAFAKRGDLLVVDRGVNEALLVGVS-LSRANVRWFRH-------NDMKDL 117 (392)
T ss_pred HHHHHHHHhCC--CcEEEecCcHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHH-HcCCeEEEeCC-------CCHHHH
Confidence 44455555543 344455555445568888899999999999999999988877 77778877774 234555
Q ss_pred HHHHHHHHH--------cCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCC--CCcchhhh
Q 019899 85 DQAFNQARK--------RGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGN--EEFVSMAE 154 (334)
Q Consensus 85 ~~~l~~~~~--------~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~--~~~~~~~~ 154 (334)
++.++.... ...++++|++.++.||+|.+.| ++++.++|++||+++|+||+|+...++. ........
T Consensus 118 ~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~---l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g 194 (392)
T PLN03227 118 RRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAP---LKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAG 194 (392)
T ss_pred HHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccC---HHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcC
Confidence 554433321 1236788888888999999999 8899999999999999999997333321 12122211
Q ss_pred hhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh--cccCCC--hHHHHHHHHhhCChHHHHHHHHH
Q 019899 155 ILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT--RFCSIS--APTQRLLISMLSDTKFIQEYLET 230 (334)
Q Consensus 155 ~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~ 230 (334)
+.+ ..+.++++.|+||.+|.. .|++++ ++++.+.++... ..++.+ +..+.++...+.... + ..+
T Consensus 195 ~~p----~~~~Div~~slsk~~g~~---gg~v~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~--~--~~~ 262 (392)
T PLN03227 195 LKP----MVHAEIVTFSLENAFGSV---GGMTVG-SEEVVDHQRLSGSGYCFSASAPPFLAKADATATAGEL--A--GPQ 262 (392)
T ss_pred CCC----CCCceEEEeechhhhhcc---CcEEec-CHHHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHh--c--CHH
Confidence 211 145678889999988634 488877 788877776432 234443 444444444443211 1 135
Q ss_pred HHHHHHHHHHHHHHHHHhCCCccc----------CCCceeEEeeecCCcCCCC---ChhhHHHHHHHHHHhcCeEEcCCC
Q 019899 231 NKRRIKKLYDSFVAGLKQLGIRCS----------ESSAGLYCWADMSGLIPSY---SEKGELELWDKLLNIAKINVTPGS 297 (334)
Q Consensus 231 ~~~~~~~~~~~~~~~l~~~g~~~~----------~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~ll~~~gi~v~~g~ 297 (334)
+.++++++.+++.+.|++.++... ....+.++.+.+....... ......++.+.++ ++|+.+.+..
T Consensus 263 ~~~~l~~~~~~l~~~L~~~~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gi~~~~~~ 341 (392)
T PLN03227 263 LLNRLHDSIANLYSTLTNSSHPYALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSL-SEGVAVVSTG 341 (392)
T ss_pred HHHHHHHHHHHHHHHHHhcCCccccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHH-HCCCEEEecc
Confidence 667788888999999976544321 1122444556664311100 0011236777744 4799886421
Q ss_pred C-----cCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 298 A-----CHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 298 ~-----~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
. .....+..+|++++. .|++|++++++.|++++++
T Consensus 342 ~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~~~ 382 (392)
T PLN03227 342 GHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVLGEAVEA 382 (392)
T ss_pred cccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 1 112235779999986 7999999999999999865
No 184
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.93 E-value=1.1e-22 Score=176.39 Aligned_cols=282 Identities=18% Similarity=0.219 Sum_probs=218.0
Q ss_pred CcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCC--hhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcC
Q 019899 18 SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPG--FDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRG 95 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~--~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~ 95 (334)
+-++++.++|.++.+++.++.+|||+||+.....++ +.+.++ .+|.+++.+.. +.+..+++++++++|++.
T Consensus 57 ~~~ll~gsGt~amEAav~sl~~pgdkVLv~~nG~FG~R~~~ia~-~~g~~v~~~~~--~wg~~v~p~~v~~~L~~~---- 129 (383)
T COG0075 57 DVVLLSGSGTLAMEAAVASLVEPGDKVLVVVNGKFGERFAEIAE-RYGAEVVVLEV--EWGEAVDPEEVEEALDKD---- 129 (383)
T ss_pred cEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCChHHHHHHHHHH-HhCCceEEEeC--CCCCCCCHHHHHHHHhcC----
Confidence 446666778999999999999999999998766554 445566 89999999998 577899999999999952
Q ss_pred CceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEeccccc
Q 019899 96 VKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKD 175 (334)
Q Consensus 96 ~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~ 175 (334)
++++++.+++..++||+..| +++|+++|++||.++|+|.+-+. ++. ...+. +++.++++++..|.
T Consensus 130 ~~~~~V~~vH~ETSTGvlnp---l~~I~~~~k~~g~l~iVDaVsS~---Gg~-~~~vd--------~wgiDv~itgSQK~ 194 (383)
T COG0075 130 PDIKAVAVVHNETSTGVLNP---LKEIAKAAKEHGALLIVDAVSSL---GGE-PLKVD--------EWGIDVAITGSQKA 194 (383)
T ss_pred CCccEEEEEeccCcccccCc---HHHHHHHHHHcCCEEEEEecccC---CCc-ccchh--------hcCccEEEecCchh
Confidence 47899999999999999999 99999999999999999998663 222 22222 27889999999999
Q ss_pred CCCCCceEEEEeecCHHHHHHHHHh--------------------hcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHH
Q 019899 176 LSLPGFRTGVIYSYNESVLAAAKKL--------------------TRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRI 235 (334)
Q Consensus 176 ~~~~g~r~g~i~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 235 (334)
++.| ..+|.+.. +++..+.+... ..+++++....+++..+++... ++-++.+.+++
T Consensus 195 l~~P-PGla~v~~-S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~--~EGle~r~~RH 270 (383)
T COG0075 195 LGAP-PGLAFVAV-SERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLIL--EEGLEARIARH 270 (383)
T ss_pred ccCC-CccceeEE-CHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHH--HhhHHHHHHHH
Confidence 9633 34788887 56554544321 2234566677788888876543 55678999999
Q ss_pred HHHHHHHHHHHHhCCCcccCCC---ceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEec
Q 019899 236 KKLYDSFVAGLKQLGIRCSESS---AGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFT 312 (334)
Q Consensus 236 ~~~~~~~~~~l~~~g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~ 312 (334)
+++.+.+++.++.+|++....+ ..-...+..|..++. .+....+++++|+.+.+|.. +.....+||+..
T Consensus 271 ~~~~~a~r~~~~alGl~~~~~~~~~s~tvta~~~P~g~~~------~~~~~~~~~~~g~~i~gg~~--~l~gkifRIGhM 342 (383)
T COG0075 271 RRLAEALRAGLEALGLELFADPERRSPTVTAIKVPEGVDD------KKVRRALLKEYGVEIAGGQG--PLKGKIFRIGHM 342 (383)
T ss_pred HHHHHHHHHHHHHcCCccccCcccCCCceEEEECCCCCCc------HHHHHHHHHhCCEEeccccc--ccCccEEEEecC
Confidence 9999999999999999987622 233455677776542 35555778889999987664 334678999855
Q ss_pred -CCCcccHHHHHHHHHHHHHHc
Q 019899 313 -SLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 313 -~~~~~~l~~~l~~l~~~~~~~ 333 (334)
..++.++..++.+|..++.++
T Consensus 343 G~~~~~dv~~~l~ale~~L~~~ 364 (383)
T COG0075 343 GNVRPEDVLAALAALEAALREL 364 (383)
T ss_pred ccCCHHHHHHHHHHHHHHHHHc
Confidence 469999999999999999875
No 185
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.93 E-value=1.9e-23 Score=187.84 Aligned_cols=275 Identities=16% Similarity=0.137 Sum_probs=186.7
Q ss_pred CcEEEecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChh-hhhhhccCcEEE---EEeCCCCCCc--cccHHHHHHHHH
Q 019899 18 SQIVLTAGATPAVEILCFCLA--DHGNALLVPSPYYPGFD-RDIRFRTGVELI---PVHCRSTDNF--AFSITALDQAFN 89 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~-~~~~~~~g~~v~---~v~~~~~~~~--~~~~~~l~~~l~ 89 (334)
+.+++++++++|+..++.... ..+++|+..+++|++.. ..+. ..+.... ..|..++..+ ..|++.+++.++
T Consensus 87 ~~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~ 165 (377)
T PRK02936 87 DLVFFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMS-ATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMN 165 (377)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhh-ccCCccccccCCCCCCCceEeCCCCHHHHHHhcc
Confidence 589999999999999998542 23467888888887543 2333 2232111 0111000000 126888998886
Q ss_pred HHHHcCCceeEEEEeCCCCCcccC-CCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEE
Q 019899 90 QARKRGVKVRGILICNPANPVGNI-IPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHI 168 (334)
Q Consensus 90 ~~~~~~~~~~~i~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (334)
+ +++++++..+++++|.. .+.+.+++|.++|++||+++|+||+|.++.+.+..+ ...... +.++
T Consensus 166 ~------~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~-~~~~~~----~~~d---- 230 (377)
T PRK02936 166 E------EVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLF-AYEQFG----LDPD---- 230 (377)
T ss_pred C------CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhh-HHHhhC----CCCc----
Confidence 4 68888888778898886 578899999999999999999999998876655422 211111 1122
Q ss_pred EecccccCCCCCceEEEEeecCHHHHHHHHHhh--cccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019899 169 IYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT--RFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGL 246 (334)
Q Consensus 169 ~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 246 (334)
+.++||.++ +|+|+||+++ ++++.+.+.... ..++.+++.+.++.++++..+. ....++++++.+++.+.|
T Consensus 231 i~t~sK~l~-~G~~ig~v~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~-----~~~~~~~~~~~~~l~~~L 303 (377)
T PRK02936 231 IVTVAKGLG-NGIPVGAMIG-KKELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQ-----PSFLEEVQEKGEYFLQKL 303 (377)
T ss_pred EEEEccccc-CCCccEEEEE-cHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHHHH
Confidence 347999999 9999999998 788888876432 3456788999998888865321 123345556666666666
Q ss_pred HhC--CCccc--CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHH
Q 019899 247 KQL--GIRCS--ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPL 321 (334)
Q Consensus 247 ~~~--g~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~ 321 (334)
++. ++... ....|+++|++++.. ...+... +.++||.+.|+. .+++|++++. .+++++++
T Consensus 304 ~~~~~~~~~~~~v~~~g~~~~i~~~~~--------~~~~~~~-l~~~gv~v~~~g------~~~lRi~p~~~~~~~~i~~ 368 (377)
T PRK02936 304 QEELEHLECVKNIRGKGLMIGIECTEE--------VAPVIEQ-LREEGLLVLSAG------PNVIRLLPPLVVTKEELDQ 368 (377)
T ss_pred HHHHhhCCcEEeEeecceEEEEEecch--------HHHHHHH-HHHCCeEEecCC------CCEEEEECCcccCHHHHHH
Confidence 552 23221 123578899998742 3456666 566899998743 4689999753 69999999
Q ss_pred HHHHHHHHH
Q 019899 322 VIERIQKVA 330 (334)
Q Consensus 322 ~l~~l~~~~ 330 (334)
++++|++++
T Consensus 369 ~i~~l~~~~ 377 (377)
T PRK02936 369 AVYLLKKVL 377 (377)
T ss_pred HHHHHHHhC
Confidence 999998763
No 186
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=4.8e-23 Score=183.56 Aligned_cols=208 Identities=17% Similarity=0.177 Sum_probs=155.6
Q ss_pred hhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhh---ccCcEEEEEeCCCCCCcccc
Q 019899 4 FMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRF---RTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~---~~g~~v~~v~~~~~~~~~~~ 80 (334)
-+.+.++...+ .+++++++|+++++..++.+++++||+|+++.|+|++....+.. ..|.+++.++. .|
T Consensus 57 ~Le~~lA~leg--~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~-------~d 127 (388)
T PRK08861 57 LLEQTLSELES--GKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQ-------SD 127 (388)
T ss_pred HHHHHHHHHhC--CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECC-------CC
Confidence 34555555444 58999999999999999999999999999999999975554321 34677777762 47
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++ ++++|++++|+||||.++| +++|.++|+++|+++++|++|....+. .++
T Consensus 128 ~e~l~~~i~~------~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~vIvDea~~~~~~~----~pl-------- 186 (388)
T PRK08861 128 AAALDAALAK------KPKLILLETPSNPLVRVVD---IAELCQKAKAVGALVAVDNTFLTPVLQ----KPL-------- 186 (388)
T ss_pred HHHHHHhcCc------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccccC----CCc--------
Confidence 8999988876 7899999999999999999 888999999999999999999753321 111
Q ss_pred cCCCcEEEEecccccCCC-CCceEEEEeecCHHHHHHHHHhhccc--CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSL-PGFRTGVIYSYNESVLAAAKKLTRFC--SISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~-~g~r~g~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
+.+.+++++|++|+++. .+...|++++.++++.+.++..+... ..++.....+..-++.. .-+.++..+
T Consensus 187 -~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~Tl-------~lR~~~~~~ 258 (388)
T PRK08861 187 -ELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGATGTPFDSYMTLRGIRTL-------GARMRVHEE 258 (388)
T ss_pred -ccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCCCChHHHHHHHhcCCCH-------HHHHHHHHH
Confidence 14566899999999964 35778998876677777777655443 34555555555555543 334456677
Q ss_pred HHHHHHHHHHhC
Q 019899 238 LYDSFVAGLKQL 249 (334)
Q Consensus 238 ~~~~~~~~l~~~ 249 (334)
++..+.+.|+++
T Consensus 259 ~a~~~a~~L~~~ 270 (388)
T PRK08861 259 SAQQILAYLQTQ 270 (388)
T ss_pred HHHHHHHHHHhC
Confidence 778888888876
No 187
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.93 E-value=2.5e-23 Score=187.02 Aligned_cols=282 Identities=16% Similarity=0.258 Sum_probs=181.5
Q ss_pred hhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhh---hccCcEEEEEeCCCCCCcccc
Q 019899 4 FMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIR---FRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~---~~~g~~v~~v~~~~~~~~~~~ 80 (334)
-+++.+++..+++ ...++++++.++..++.+++++||+|+++.+.|+++...+. ...|.+++.++ .+|
T Consensus 69 ~Le~~lA~l~G~~--~~~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd-------~~d 139 (398)
T PRK07504 69 MFEKRMCALEGAE--DARATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVD-------GLD 139 (398)
T ss_pred HHHHHHHHHhCCC--eeeEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEEC-------CCC
Confidence 3445555555544 34567788889988888888999999999999998655432 14688888876 368
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++ ++++|++++|+||+|.+.| +++|.++|+++|+++|+|++|+...+. .+. .
T Consensus 140 ~e~l~~ai~~------~tklV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~~~~----~~~----~--- 199 (398)
T PRK07504 140 LDNWEKAVRP------NTKVFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFATPLFQ----KPL----E--- 199 (398)
T ss_pred HHHHHHhcCc------CceEEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCccccccC----Cch----h---
Confidence 9999999876 8999999999999999999 899999999999999999999754321 111 1
Q ss_pred cCCCcEEEEecccccCCCCCceEE-EEeecCHHHHH-HHHHhhccc--CCChHHHHHHHHhhCChHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTG-VIYSYNESVLA-AAKKLTRFC--SISAPTQRLLISMLSDTKFIQEYLETNKRRIK 236 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g-~i~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 236 (334)
.+.++++.|++|.++.+|.++| ++++ +++.++ .++...... ..++.....+..-++. +..+.++..
T Consensus 200 --~gaDivv~S~sK~l~g~g~~~GG~vv~-~~~~i~~~~~~~~~~~g~~~s~~~A~~~l~~L~t-------l~~R~~~~~ 269 (398)
T PRK07504 200 --LGAHIVVYSATKHIDGQGRCLGGVVLS-DKAWIEEHLQDYFRHTGPSLSPFNAWTLLKGLET-------LPVRVRQQT 269 (398)
T ss_pred --hCCCEEEeeccccccCCccceEEEEEe-CcHHHHHHHHHHHHHhCCCCCHHHHHHHHhccch-------HHHHHHHHH
Confidence 4567889999999987898886 5555 555443 344322222 2333333333333322 233444555
Q ss_pred HHHHHHHHHHHhC-CCc---cc----CC----------CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCC
Q 019899 237 KLYDSFVAGLKQL-GIR---CS----ES----------SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSA 298 (334)
Q Consensus 237 ~~~~~~~~~l~~~-g~~---~~----~~----------~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~ 298 (334)
+++..+.+.|+++ ++. ++ .| ..|-.+.+++... .+....+.+. ++-..+.+.-|..
T Consensus 270 ~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~-----~~~~~~~~~~-l~~~~~~~slG~~ 343 (398)
T PRK07504 270 ESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGG-----KEAAFRFLNA-LKIVRISNNLGDA 343 (398)
T ss_pred HHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCC-----HHHHHHHHHh-CCcceecccCCCC
Confidence 7777777788765 332 11 11 1133445666421 1223344444 3323332222221
Q ss_pred cC----------C-----------CCCCeEEEEecCCCcccHHHHHHHHHHHHHHc
Q 019899 299 CH----------C-----------IEPGWFRCCFTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 299 ~~----------~-----------~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
.. . ..++-+|+|++ -|+.+++++.|.+++++.
T Consensus 344 ~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svG---lE~~~dl~~dl~~al~~~ 396 (398)
T PRK07504 344 KSLITHPATTTHKNLSPEARAELGISEGFLRLSAG---LEDTDDLIEDLAAALKKV 396 (398)
T ss_pred CeeeeCCCCCCcccCCHHHHHhcCCCCCeEEEEec---cCCHHHHHHHHHHHHHhh
Confidence 10 0 02357999999 677888888888888764
No 188
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.93 E-value=5.4e-23 Score=184.44 Aligned_cols=282 Identities=16% Similarity=0.139 Sum_probs=189.4
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhh----hhhccCcEEEEEeCCCCCCcccc
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRD----IRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
+.+.++...+ .+++++++|+++|+..++.+++++||+|+++.|+|.++... +. ..|.+++.++.. +
T Consensus 70 Le~~lA~l~g--~~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~-~~Gi~v~~vd~~-------~ 139 (394)
T PRK07050 70 LAQRLAEIEG--GRHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLAR-DFGITVRFYDPL-------I 139 (394)
T ss_pred HHHHHHHHhC--CCeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHH-hcCeEEEEECCC-------C
Confidence 4444554443 56899999999999999999999999999999999987753 34 679999888741 3
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
.+++++++++ ++++|++++|+||+|...+ +++|.++|+++|+++++|++|.... ...++.
T Consensus 140 ~~~l~~~i~~------~tklV~le~p~Np~~~~~d---i~~I~~ia~~~gi~livD~a~a~~~-------~~~~l~---- 199 (394)
T PRK07050 140 GAGIADLIQP------NTRLIWLEAPGSVTMEVPD---VPAITAAARARGVVTAIDNTYSAGL-------AFKPFE---- 199 (394)
T ss_pred HHHHHHhcCC------CCeEEEEECCCCCCccHhh---HHHHHHHHHHcCCEEEEECCccccc-------ccCHHH----
Confidence 4678888765 7999999999999986666 9999999999999999999987522 111221
Q ss_pred cCCCcEEEEecccccCC-CCCceEEEEeecCHHHHHHHHHhhccc--CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLS-LPGFRTGVIYSYNESVLAAAKKLTRFC--SISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~-~~g~r~g~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
.+.++++.|++|.++ ..+...|++++.++++.++++..+... +.++.....+...++.. ..+.++..+
T Consensus 200 --~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~lr~l~tl-------~~Rl~~~~~ 270 (394)
T PRK07050 200 --HGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGVSADDCSLVLRGLPSL-------QVRLAAHDR 270 (394)
T ss_pred --cCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCCcH-------HHHHHHHHH
Confidence 466789999999995 345678988887888888887655543 34444433333333332 224445556
Q ss_pred HHHHHHHHHHhC-CCc-cc--C--------------CCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCc
Q 019899 238 LYDSFVAGLKQL-GIR-CS--E--------------SSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSAC 299 (334)
Q Consensus 238 ~~~~~~~~l~~~-g~~-~~--~--------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~ 299 (334)
++..+.+.|+++ .+. +. . ...|-.+.+++.... ..++..++.+. ++..++.+.-|...
T Consensus 271 ~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~---~~~~~~~~~~~-l~~~~~~~s~G~~~ 346 (394)
T PRK07050 271 SALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERY---SPAQVDAFVEA-LELFAIGWSWGGAC 346 (394)
T ss_pred HHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCC---CHHHHHHHHHc-CCCCeeccccCCcc
Confidence 666777777665 221 10 0 112223445554221 12345566666 55566654433322
Q ss_pred CC---------------CCCCeEEEEecCCCcccHHHHHHHHHHHHHH
Q 019899 300 HC---------------IEPGWFRCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 300 ~~---------------~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
.. ..++-+|+|++ -|+.+.+++.|.+++++
T Consensus 347 sl~~~~~~~~~~~~~~~~~~~~iR~svG---lE~~~dl~~dl~~al~~ 391 (394)
T PRK07050 347 SLAMPYDVASMRTAKWPHRGTLVRLYIG---LEDEADLIADLEQALEA 391 (394)
T ss_pred ceEeeCcccccchhhcCCCCCEEEEEeC---cCCHHHHHHHHHHHHHH
Confidence 10 01257999999 67788888888888765
No 189
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.93 E-value=7.7e-23 Score=182.10 Aligned_cols=272 Identities=14% Similarity=0.145 Sum_probs=180.8
Q ss_pred hhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhh---hccCcEEEEEeCCCCCCcccc
Q 019899 4 FMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIR---FRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~---~~~g~~v~~v~~~~~~~~~~~ 80 (334)
.+.+.++... .++.++++++++++..++.+++++||+|+++.|.|+++...+. ...|.+++.++..+ .
T Consensus 55 ~Le~~lA~l~---~~~~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~--~---- 125 (366)
T PRK07582 55 ALEAALGELE---GAEALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTAG--M---- 125 (366)
T ss_pred HHHHHHHHHc---CCCEEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCC--h----
Confidence 3455565544 3567777777889999999999999999999999988876442 14799999998632 1
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
.+ .+.+ ++++|++++|+||+|.+.+ +++|+++|+++|+++++|++|.... + ..++ .
T Consensus 126 ~~----~~~~------~t~lV~le~p~NPtg~v~d---i~~I~~~a~~~g~~lvVD~t~~~~~--~--~~p~-~------ 181 (366)
T PRK07582 126 AE----AALA------GADLVLAETPSNPGLDVCD---LAALAAAAHAAGALLVVDNTTATPL--G--QRPL-E------ 181 (366)
T ss_pred HH----Hhcc------CceEEEEECCCCCCCCccC---HHHHHHHHHHcCCEEEEECCCCCcc--c--cCch-h------
Confidence 11 1222 7899999999999999888 9999999999999999999985311 1 1111 1
Q ss_pred cCCCcEEEEecccccC-CCCCceEEEEeecCHHHHHHHHHhhccc--CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDL-SLPGFRTGVIYSYNESVLAAAKKLTRFC--SISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~-~~~g~r~g~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
.+.+++++|++|++ |.+|+++||++++++++.+.++...... ..++.....+...++.. ..+.++..+
T Consensus 182 --~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~tl-------~~R~~~~~~ 252 (366)
T PRK07582 182 --LGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAIPGPFEAWLAHRSLGTL-------GLRFARQCA 252 (366)
T ss_pred --cCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhccccH-------HHHHHHHHH
Confidence 34457889999999 4567999999986788888887654443 34555555555555442 233355667
Q ss_pred HHHHHHHHHHhC-CCc---cc----CC-----------CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCC
Q 019899 238 LYDSFVAGLKQL-GIR---CS----ES-----------SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSA 298 (334)
Q Consensus 238 ~~~~~~~~l~~~-g~~---~~----~~-----------~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~ 298 (334)
++..+.+.|+++ .+. ++ .| .+|+ +.+++.. .+-..++++..++... +..
T Consensus 253 na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~-~s~~~~~----------~~~~~~~~~~l~~~~~-~~s 320 (366)
T PRK07582 253 NALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGL-VSFELAD----------AAAAERFVAASRLVVA-ATS 320 (366)
T ss_pred HHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcce-EEEEeCC----------HHHHHHHHHhCCccee-ccc
Confidence 788888888776 222 11 12 2343 4456642 1333344565665432 111
Q ss_pred cCC--------------CCCCeEEEEecCCCcccHHHHHHHHHHHHHH
Q 019899 299 CHC--------------IEPGWFRCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 299 ~~~--------------~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
+|. ..++.+|+|++ -|+.+++++.|.+++++
T Consensus 321 ~G~~~sl~~~~~~~~~~~~~~liR~svG---lE~~~dli~dl~~al~~ 365 (366)
T PRK07582 321 FGGVHTSADRRARWGDAVPEGFVRLSCG---IEDTDDLVADLERALDA 365 (366)
T ss_pred CCCccchhhhHHHcCCCCCCCeEEEEec---cCCHHHHHHHHHHHHhh
Confidence 111 12357999999 55667778888877765
No 190
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=1e-22 Score=182.81 Aligned_cols=205 Identities=13% Similarity=0.161 Sum_probs=149.9
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhh----hhhccCcEEEEEeCCCCCCcccc
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRD----IRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
+++.++...+ .++.++++++++|+..++.+++++||+|+++.|+|++.... +. ..|++++.++. .|
T Consensus 69 le~~lA~l~g--~~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~-~~Gi~v~~vd~-------~d 138 (398)
T PRK08249 69 FEEKVRILEG--AEAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLP-RMGVDVTLCET-------GD 138 (398)
T ss_pred HHHHHHHHhC--CCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHh-hCCeEEEEcCC-------CC
Confidence 4455554444 45678888889999999999999999999999999976543 34 57888877763 58
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++ ++++|++++|+||||.+.| +++|.++|+++|+++|+|++|+..... .+. .
T Consensus 139 ~e~l~~~i~~------~tklV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~----~~l----~--- 198 (398)
T PRK08249 139 HEQIEAEIAK------GCDLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQ----NPL----A--- 198 (398)
T ss_pred HHHHHHhcCC------CCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccC----Cch----h---
Confidence 8999999976 7899999999999999999 888999999999999999999854321 111 1
Q ss_pred cCCCcEEEEecccccCCCCCceE-EEEeecCHHHHHHHHHhhccc--CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRT-GVIYSYNESVLAAAKKLTRFC--SISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~-g~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
.+.++++.|+||.++.+|.++ |+++. ++++.+.++...... ..++..+..+..-++. +..+.++..+
T Consensus 199 --~~~Divv~S~sK~l~g~~~~~gG~vv~-~~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~t-------L~~R~~~~~~ 268 (398)
T PRK08249 199 --LGADLVIHSATKFLSGHADALGGVVCG-SKELMEQVYHYREINGATMDPMSAYLILRGMKT-------LKLRVRQQQE 268 (398)
T ss_pred --hCCCEEeccCceecCCCCCceEEEEEC-CHHHHHHHHHHHHhcCCCCCHHHHHHHHhCcch-------HHHHHHHHHH
Confidence 344578899999998667666 55555 888888887655433 3344444433333322 2334455667
Q ss_pred HHHHHHHHHHhC
Q 019899 238 LYDSFVAGLKQL 249 (334)
Q Consensus 238 ~~~~~~~~l~~~ 249 (334)
+++.+.+.|+++
T Consensus 269 na~~la~~L~~~ 280 (398)
T PRK08249 269 SAMALAKYLQTH 280 (398)
T ss_pred HHHHHHHHHHcC
Confidence 778888888775
No 191
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.92 E-value=3.4e-23 Score=184.73 Aligned_cols=160 Identities=18% Similarity=0.331 Sum_probs=128.3
Q ss_pred CCCcEEEecCcHHHHHHHHHHh-cCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 16 DPSQIVLTAGATPAVEILCFCL-ADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l-~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
..+++++|+|+++|+.+++.++ .++||+|+++.++|.++...+. ..|++++.+++++ +++.+|++++++++++
T Consensus 45 g~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~~~~~~~-~~G~~~v~vd~d~-~~~~~d~~~le~~i~~---- 118 (376)
T TIGR02379 45 GTKKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAFV-LRGAKIVFVDIRP-DTMNIDETLIESAITH---- 118 (376)
T ss_pred CCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHHH-HcCCEEEEEecCC-CcCCCCHHHHHHhcCc----
Confidence 3578999999999999999887 7899999999999999988888 8899999999864 4578999999999876
Q ss_pred CCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccc-cCCCCcchhhhhhhccccCCCcEEEEecc-
Q 019899 95 GVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSI-FGNEEFVSMAEILEAEEVDKDRVHIIYGL- 172 (334)
Q Consensus 95 ~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~- 172 (334)
++++|+ |+||+|...+ +++|.++|+++|++||+|++|+.+. +.+....++ + .+.+.||
T Consensus 119 --~tk~Ii---p~~~~G~~~d---~~~I~~la~~~~i~vIeDaa~~~g~~~~~~~~g~~-----------~-~~~~fSf~ 178 (376)
T TIGR02379 119 --RTKAIV---PVHYAGVACD---MDTIMALANKHQLFVIEDAAQGVMSTYKGRALGSI-----------G-HLGTFSFH 178 (376)
T ss_pred --CceEEE---EeCCCCCccC---HHHHHHHHHHCCCEEEEECccccCCccCCcccCCC-----------C-CEEEEeCC
Confidence 788775 5678999998 8899999999999999999998754 443322111 1 1223333
Q ss_pred -cccCCCCCceEEEEeecCHHHHHHHHHhhc
Q 019899 173 -SKDLSLPGFRTGVIYSYNESVLAAAKKLTR 202 (334)
Q Consensus 173 -sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~ 202 (334)
+|.+. +|.+.|+++++++++.++++..+.
T Consensus 179 ~~K~l~-~g~~gG~v~~~~~~~~~~~~~~~~ 208 (376)
T TIGR02379 179 ETKNYT-SGGEGGALLINDQAFIERAEIIRE 208 (376)
T ss_pred CCCcCc-ccCCceEEEECCHHHHHHHHHHHH
Confidence 37775 677889999878999888876543
No 192
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.92 E-value=9e-23 Score=182.97 Aligned_cols=280 Identities=15% Similarity=0.187 Sum_probs=184.3
Q ss_pred hhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhh----hhhccCcEEEEEeCCCCCCccc
Q 019899 4 FMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRD----IRFRTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~~g~~v~~v~~~~~~~~~~ 79 (334)
.+.+.++...+. +..++++++++++..++.+++++||+|+++.|.|...... +. ..|.+++.+++.
T Consensus 63 ~le~~lA~l~g~--~~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~-~~G~~~~~vd~~------- 132 (391)
T TIGR01328 63 NLEGRIAFLEGT--EAAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALT-KFGIQVDFINMA------- 132 (391)
T ss_pred HHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHh-cCCeEEEEECCC-------
Confidence 345555555543 4578888889999999999999999999999988765443 33 578999888852
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
|++++++++++ ++++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|+..... .+ + .
T Consensus 133 d~e~l~~~i~~------~tklV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~~~~~----~~---~-~-- 193 (391)
T TIGR01328 133 IPEEVKAHIKD------NTKIVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFATPMLT----NP---V-A-- 193 (391)
T ss_pred CHHHHHHhhcc------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCchhccC----Cc---h-h--
Confidence 68899998876 7899999999999999999 889999999999999999999753321 11 1 1
Q ss_pred ccCCCcEEEEecccccCCCCCceE-EEEeecCHHHHHHHHHhh--ccc--CCChHHHHHHHHhhCChHHHHHHHHHHHHH
Q 019899 160 EVDKDRVHIIYGLSKDLSLPGFRT-GVIYSYNESVLAAAKKLT--RFC--SISAPTQRLLISMLSDTKFIQEYLETNKRR 234 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~g~r~-g~i~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 234 (334)
.+.++++.|++|.++.+|.++ |+++. ++++.+.++... ..+ ..++.....+..-++. +..+.++
T Consensus 194 ---~g~Divv~S~sK~lgg~g~~~gG~v~~-~~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~t-------l~~r~~~ 262 (391)
T TIGR01328 194 ---LGVDVVVHSATKYIGGHGDVVAGLICG-KAELLQQIRMVGIKDMTGSVISPFDAWLILRGLKT-------LNIRMKR 262 (391)
T ss_pred ---cCCCEEEccccccccCCCCceEEEEEc-CHHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcCc-------HHHHHHH
Confidence 355588899999998788764 66665 888888777532 222 2333333333333332 2334555
Q ss_pred HHHHHHHHHHHHHhC-CCccc------------------CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcC
Q 019899 235 IKKLYDSFVAGLKQL-GIRCS------------------ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTP 295 (334)
Q Consensus 235 ~~~~~~~~~~~l~~~-g~~~~------------------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~ 295 (334)
..++.+.+.+.|+++ ++..+ ...+|+ +.+++... ......+.+. ++-..+...-
T Consensus 263 ~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~-~s~~~~~~-----~~~~~~f~~~-l~~~~~~~s~ 335 (391)
T TIGR01328 263 HSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGM-ITFELKGG-----FAGAKKLLNN-LKLIRLAVSL 335 (391)
T ss_pred HHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCce-EEEEeCCC-----HHHHHHHHHh-CCcceEecCC
Confidence 667777788888775 22211 112333 44566421 1122333333 3322222222
Q ss_pred CCCcC----C-----------------CCCCeEEEEecCCCcccHHHHHHHHHHHHHHc
Q 019899 296 GSACH----C-----------------IEPGWFRCCFTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 296 g~~~~----~-----------------~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
|.... + ..++-+|+|++ .||.+.+++.|.++++++
T Consensus 336 G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svG---lE~~~dl~~dl~~al~~~ 391 (391)
T TIGR01328 336 GDAETLIQHPASMTHAVVPKEEREAAGITDGMIRLSVG---LEDADDLIADLKQALDAL 391 (391)
T ss_pred CCCcccCcCCCccccccCCHHHHHhcCCCCCeEEEEeC---cCCHHHHHHHHHHHHhhC
Confidence 22210 0 01357999999 778899999999998753
No 193
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.92 E-value=1.7e-22 Score=181.93 Aligned_cols=205 Identities=18% Similarity=0.190 Sum_probs=147.9
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhh----hhhhccCcEEEEEeCCCCCCcccc
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDR----DIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
+++.++...+. +..++++++++++.+++.+++++||+|+++.|.|..... .+. ..|.+++.++. .|
T Consensus 70 le~~lA~l~g~--~~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~-~~G~~v~~vd~-------~d 139 (403)
T PRK07503 70 LEQRMASLEGG--EAAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLG-EFGVTVRHVDL-------TD 139 (403)
T ss_pred HHHHHHHHhCC--CcEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHh-hCCEEEEEeCC-------CC
Confidence 44555555544 346777788899999999999999999999999976443 334 57999998885 26
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++ ++++|++++|+||+|.+.| +++|.++|+++|+++|+|++|+..... .++ .
T Consensus 140 ~~~l~~~i~~------~tklV~le~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~~~~~----~~l----~--- 199 (403)
T PRK07503 140 PAALKAAISD------KTRMVYFETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCTPYLQ----RPL----E--- 199 (403)
T ss_pred HHHHHHhcCc------cCcEEEEeCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccC----Cch----h---
Confidence 8899998876 7899999999999999999 899999999999999999999753221 111 1
Q ss_pred cCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHHh--hcc--cCCChHHHHHHHHhhCChHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKKL--TRF--CSISAPTQRLLISMLSDTKFIQEYLETNKRRI 235 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 235 (334)
.+.++++.|++|.++.+| .+.|+++. ++++.++++.. ... ...++.....+..-++. +..+.++.
T Consensus 200 --~g~Di~v~S~tK~l~g~gd~~gG~v~~-~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~t-------l~~r~~~~ 269 (403)
T PRK07503 200 --LGADLVVHSATKYLGGHGDITAGLVVG-GKALADRIRLEGLKDMTGAVMSPFDAFLLMRGLKT-------LALRMDRH 269 (403)
T ss_pred --hCCCEEEccccccccCCCceeEEEEEc-CHHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcch-------HHHHHHHH
Confidence 345688999999998665 78888886 88888887633 222 23444444433333322 22333344
Q ss_pred HHHHHHHHHHHHhC
Q 019899 236 KKLYDSFVAGLKQL 249 (334)
Q Consensus 236 ~~~~~~~~~~l~~~ 249 (334)
.+++..+.+.|+++
T Consensus 270 ~~na~~~a~~L~~~ 283 (403)
T PRK07503 270 CASAQAVAEWLARH 283 (403)
T ss_pred HHHHHHHHHHHHhC
Confidence 56667777777765
No 194
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.92 E-value=7.7e-23 Score=183.38 Aligned_cols=281 Identities=15% Similarity=0.176 Sum_probs=182.6
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhh---ccCcEEEEEeCCCCCCccccH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRF---RTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~---~~g~~v~~v~~~~~~~~~~~~ 81 (334)
+++.++...+.+ ..++++++++|+.+++.+++++||+|+++.|+|++....+.. ..|.++..++. .|+
T Consensus 66 Le~~lA~~~g~~--~~i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~-------~d~ 136 (388)
T PRK07811 66 LEEQLAALEGGA--YGRAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDL-------SDL 136 (388)
T ss_pred HHHHHHHHhCCC--ceEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCC-------CCH
Confidence 455555544433 345566778999999999999999999999999976554331 25777777764 478
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
+++++++++ ++++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|+..... .++ .
T Consensus 137 e~l~~~i~~------~tklV~ie~p~NPtg~~~d---l~~I~~la~~~gi~lIvD~a~a~~~~~----~p~----~---- 195 (388)
T PRK07811 137 DAVRAAITP------RTKLIWVETPTNPLLSITD---IAALAELAHDAGAKVVVDNTFASPYLQ----QPL----A---- 195 (388)
T ss_pred HHHHHhcCc------CCeEEEEECCCCCcceecC---HHHHHHHHHHcCCEEEEECCCCccccC----Cch----h----
Confidence 999998876 7899999999999999988 999999999999999999999753321 111 1
Q ss_pred CCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHHhhcccC--CChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 162 DKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKKLTRFCS--ISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
.+.++++.|++|.++.+| .+.||++++++++.+.++......+ .++.....+...++. +..+.++..++
T Consensus 196 -~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~t-------l~~R~~~~~~n 267 (388)
T PRK07811 196 -LGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVPGPFDAYLTLRGLKT-------LAVRMDRHSEN 267 (388)
T ss_pred -hCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc-------HHHHHHHHHHH
Confidence 345688999999997554 5789998867888777766544432 233332222333332 23445556677
Q ss_pred HHHHHHHHHhC-CCcc---cC----C----------CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcC
Q 019899 239 YDSFVAGLKQL-GIRC---SE----S----------SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACH 300 (334)
Q Consensus 239 ~~~~~~~l~~~-g~~~---~~----~----------~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~ 300 (334)
...+.+.|+++ ++.. .. | ..|-.+.+++... ......+.+. ++-..+...-|....
T Consensus 268 a~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~-----~~~~~~f~~~-l~~~~~~~s~G~~~s 341 (388)
T PRK07811 268 AEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGG-----EEAARDFCAR-TKVFTLAESLGGVES 341 (388)
T ss_pred HHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCC-----HHHHHHHHHh-CCcceeeccCCCCcc
Confidence 88888888776 2221 10 0 1122445666421 1122333333 222222222222110
Q ss_pred ----------C--------CCCCeEEEEecCCCcccHHHHHHHHHHHHHH
Q 019899 301 ----------C--------IEPGWFRCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 301 ----------~--------~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
. ..++-+|+|++ -|+.+.+++.|.+++++
T Consensus 342 l~~~~~~~~~~~~~~~~~gi~~~liR~svG---lE~~~dl~~dl~~al~~ 388 (388)
T PRK07811 342 LIEHPSAMTHASTAGSQLEVPDDLVRLSVG---IEDVADLLADLEQALGQ 388 (388)
T ss_pred eEeCCcccCcccCCHhhcCCCCCEEEEEeC---CCCHHHHHHHHHHHhhC
Confidence 0 01357999999 67788888888888753
No 195
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.92 E-value=1.8e-22 Score=180.70 Aligned_cols=205 Identities=16% Similarity=0.247 Sum_probs=149.1
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhh----hhhhccCcEEEEEeCCCCCCcccc
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDR----DIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
+.+.++...+. +++++++++++++..++.+++++||+|+++.+.|++... .+. ..|.+++.++.. |
T Consensus 59 le~~la~l~g~--~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~-~~g~~v~~v~~~-------d 128 (380)
T TIGR01325 59 FEERIAALEGA--ERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILP-RFGIEVSFVDPT-------D 128 (380)
T ss_pred HHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHH-HhCCEEEEECCC-------C
Confidence 34445544443 578899999999999999999999999999999876443 344 578999888852 6
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++ ++++|++++|+||+|.+.| +++|.++|+++|+++|+|++|....+. .++ .
T Consensus 129 ~~~l~~~i~~------~tklV~le~p~np~g~~~d---l~~I~~la~~~gi~livD~a~~~~~~~----~pl----~--- 188 (380)
T TIGR01325 129 LNAWEAAVKP------NTKLVFVETPSNPLGELVD---IAALAELAHAIGALLVVDNVFATPVLQ----QPL----K--- 188 (380)
T ss_pred HHHHHHhcCC------CceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccC----Cch----h---
Confidence 8888888865 7899999999999999999 899999999999999999998753321 111 1
Q ss_pred cCCCcEEEEecccccCCCCCceE-EEEeecCHHHHHHHHHhhcccC--CChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRT-GVIYSYNESVLAAAKKLTRFCS--ISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~-g~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
.+.++++.|++|.++.+|.++ |++++ ++++.+.++......+ .++... ..++...+. +..+.++..+
T Consensus 189 --~g~Divv~S~sK~l~g~g~~~gG~vv~-~~~~~~~l~~~~~~~g~~~~p~~a---~~~l~~l~t----l~~r~~~~~~ 258 (380)
T TIGR01325 189 --LGADVVVYSATKHIDGQGRVMGGVIAG-SEELMAEVAVYLRHTGPAMSPFNA---WVLLKGLET----LSLRMQKQFD 258 (380)
T ss_pred --hCCCEEEeeccceecCCCCeEEEEEEe-CHHHHHHHHHHHHhhCCCCCHHHH---HHHHhccCc----HHHHHHHHHH
Confidence 455688899999998778776 66666 7778777775543332 233332 233333222 2334556667
Q ss_pred HHHHHHHHHHhC
Q 019899 238 LYDSFVAGLKQL 249 (334)
Q Consensus 238 ~~~~~~~~l~~~ 249 (334)
++..+.+.|+++
T Consensus 259 ~a~~la~~L~~~ 270 (380)
T TIGR01325 259 SALAIAEWLQAQ 270 (380)
T ss_pred HHHHHHHHHHcC
Confidence 777888888876
No 196
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.92 E-value=1.2e-22 Score=182.31 Aligned_cols=208 Identities=13% Similarity=0.166 Sum_probs=148.1
Q ss_pred hhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhh----hhhccCcEEEEEeCCCCCCccc
Q 019899 4 FMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRD----IRFRTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~~g~~v~~v~~~~~~~~~~ 79 (334)
-+++.++...+.+ + .+++++++.++..++. ++++||+|+++.|.|++.... ++ ..|.+++.++. .
T Consensus 58 ~le~~lA~l~g~~-~-~v~~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~-~~G~~v~~v~~-------~ 126 (390)
T PRK08064 58 ALEDIIAELEGGT-K-GFAFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLS-RFGIEHTFVDM-------T 126 (390)
T ss_pred HHHHHHHHHhCCC-C-eEEECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHH-HcCCEEEEECC-------C
Confidence 3455566555544 3 4555666778888886 678999999999999865543 33 57999999985 2
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
|++++++++++ ++++|++++|+||||.+.| +++|.++|+++|+++++|++|..+... .++ .
T Consensus 127 d~~~l~~~l~~------~tklV~l~~p~NptG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~----~~~----~-- 187 (390)
T PRK08064 127 NLEEVAQNIKP------NTKLFYVETPSNPLLKVTD---IRGVVKLAKAIGCLTFVDNTFLTPLLQ----KPL----D-- 187 (390)
T ss_pred CHHHHHHhcCC------CceEEEEECCCCCCcEecc---HHHHHHHHHHcCCEEEEECCCCccccc----Cch----h--
Confidence 68889888875 7899999999999999998 889999999999999999998753211 111 1
Q ss_pred ccCCCcEEEEecccccCC-CCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 160 EVDKDRVHIIYGLSKDLS-LPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~-~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
.+.++++.|++|.++ .+|.-.|++++.++++.+.++.....++.....+.+.. ++..... +..+.++..++
T Consensus 188 ---~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~~~~~a~l-~~~gl~t----l~~R~~~~~~~ 259 (390)
T PRK08064 188 ---LGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVLGVQDCWL-VLRGLKT----LHVRLEHSSET 259 (390)
T ss_pred ---hCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHH-HHcccCc----HHHHHHHHHHH
Confidence 456788999999985 34456787777678888888877766655443333332 2232221 23445556677
Q ss_pred HHHHHHHHHhC
Q 019899 239 YDSFVAGLKQL 249 (334)
Q Consensus 239 ~~~~~~~l~~~ 249 (334)
+..+.+.|+++
T Consensus 260 a~~la~~L~~~ 270 (390)
T PRK08064 260 ANKIALYLQEH 270 (390)
T ss_pred HHHHHHHHhcC
Confidence 77777777765
No 197
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.92 E-value=9.1e-23 Score=163.88 Aligned_cols=302 Identities=16% Similarity=0.217 Sum_probs=225.6
Q ss_pred hhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHH
Q 019899 3 GFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSIT 82 (334)
Q Consensus 3 ~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~ 82 (334)
+|+.+ ++.+++ .|.+-+|+|+.++-++++.+++++||.|+++..+|+...-+++ ..|.++..||-..-..+.++++
T Consensus 65 ~F~~d-laeFlg--~D~~R~t~GARe~KfavMhal~~~gd~vV~D~~aHYttyvAAE-ragl~v~eVp~tg~Pey~i~~e 140 (382)
T COG1103 65 DFLED-LAEFLG--MDEVRVTAGAREAKFAVMHALCKEGDWVVVDSLAHYTTYVAAE-RAGLNVAEVPNTGYPEYKITPE 140 (382)
T ss_pred HHHHH-HHHHhC--CceeeecccchhhHHHHHHHhccCCCEEEEcCcchHHHHHHHH-hcCCeEEecCCCCCCceEecHH
Confidence 44554 555544 6778899999999999999999999999999999998888888 9999999999655677899999
Q ss_pred HHHHHHHHHHHcC-CceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 83 ALDQAFNQARKRG-VKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 83 ~l~~~l~~~~~~~-~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
...+.|++...++ ..+.+.++++|....|.+.| .++++++|+++|++++...+|.. |..+++..+
T Consensus 141 ~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~D---akkva~ic~e~gvPlllN~AYt~----Grmpvs~ke------- 206 (382)
T COG1103 141 GYAEVIEEVKDEGGDPPALALLTHVDGEYGNLAD---AKKVAKICREYGVPLLLNCAYTV----GRMPVSGKE------- 206 (382)
T ss_pred HHHHHHHHHHhccCCCceEEEEeccCCCcCCchh---hHHHHHHHHHcCCceEeecceee----ccccccccc-------
Confidence 9999999988764 66899999999888888888 99999999999999999999986 556666654
Q ss_pred CCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh-c--------ccCCChHHHHHHHHhhCChHHHHHHHHHHH
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT-R--------FCSISAPTQRLLISMLSDTKFIQEYLETNK 232 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 232 (334)
.+.++.++|-+|+++.+| ++|.+.. +.++.+..-+.+ . .++.+. .-..+..++.+..+..+...+..
T Consensus 207 -~g~DFiVgSGHKsmAAs~-PiGvl~~-~eE~ae~V~r~Sg~~~~~KEvellGCT~-rGapivTlmASfP~V~eRVkrWd 282 (382)
T COG1103 207 -IGADFIVGSGHKSMAASA-PIGVLAM-SEEWAEIVLRRSGRAFPKKEVELLGCTV-RGAPIVTLMASFPHVVERVKRWD 282 (382)
T ss_pred -cCCCEEEecCccchhccC-CeeEEee-hhHHHHHHHhhcccccccceeeeecccc-cCchHHHHHhcCHHHHHHHHHHH
Confidence 566789999999997444 7999988 888877664433 1 122221 11223444445445555544444
Q ss_pred HHHHHHHHHHHHHHHhCC-Cccc--CCCceeEEeeecCCc--CCCCChhhHHHHHHHHHHhcCeE-EcCCCCcCCCCCCe
Q 019899 233 RRIKKLYDSFVAGLKQLG-IRCS--ESSAGLYCWADMSGL--IPSYSEKGELELWDKLLNIAKIN-VTPGSACHCIEPGW 306 (334)
Q Consensus 233 ~~~~~~~~~~~~~l~~~g-~~~~--~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~ll~~~gi~-v~~g~~~~~~~~~~ 306 (334)
+ --++.+++.+.|+++| +... .|...-.+.+..|.. +..+......-+... |+++||. |.||. ..+
T Consensus 283 e-Ev~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~E-LK~RgI~GI~~G~------Tk~ 354 (382)
T COG1103 283 E-EVEKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVFHEIAKKHKRKGYFLYEE-LKKRGIHGIQPGQ------TKY 354 (382)
T ss_pred H-HHHHHHHHHHHHHHhhhHHHhCCCCcccceeeecCchHHHHHHhCcCCceeeHHH-HHhcCccccccCc------eeE
Confidence 4 4466779999999984 6654 455555566666643 111122222335666 6667874 66665 568
Q ss_pred EEEEecCCCcccHHHHHHHHHHHHHHcC
Q 019899 307 FRCCFTSLTHEDIPLVIERIQKVAETCK 334 (334)
Q Consensus 307 iRi~~~~~~~~~l~~~l~~l~~~~~~~~ 334 (334)
+.+|+-..+.|+++.+++++++++++++
T Consensus 355 ~K~svyGl~~Eqve~V~~afkeI~eky~ 382 (382)
T COG1103 355 FKLSVYGLSWEQVEYVVDAFKEIAEKYG 382 (382)
T ss_pred EEEEeecCCHHHHHHHHHHHHHHHHhcC
Confidence 9999776899999999999999998864
No 198
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.92 E-value=1.9e-22 Score=180.58 Aligned_cols=283 Identities=14% Similarity=0.146 Sum_probs=195.7
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHh--------------cCCCCeEEecCCCCCChhhhhhhcc----CcEE
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCL--------------ADHGNALLVPSPYYPGFDRDIRFRT----GVEL 66 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l--------------~~~gd~vl~~~p~~~~~~~~~~~~~----g~~v 66 (334)
+.+.+++++ ..++.++.+++..|+..++.++ .+++|.|+++.-+|.+....++ +. +.++
T Consensus 152 LE~~LA~f~--g~e~all~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~-ls~~~~~a~~ 228 (476)
T PLN02955 152 LESSLADLK--KKEDCLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVR-LAERQGNVEV 228 (476)
T ss_pred HHHHHHHHH--CCCcEEEECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHH-hccccCCceE
Confidence 344445443 3678999999999999999887 2466789999999999999988 55 5777
Q ss_pred EEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCC-CCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccC
Q 019899 67 IPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNP-ANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFG 145 (334)
Q Consensus 67 ~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p-~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~ 145 (334)
+.++ +.|+++|++.++... .+.+ ++++.+ .++.|.+.| +++|.++|++||+++|+||+|+.++++
T Consensus 229 ~~f~-------HND~~~Le~~L~~~~---~~~~-~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G 294 (476)
T PLN02955 229 FVYR-------HCDMYHLNSLLSSCK---MKRK-VVVTDSLFSMDGDFAP---MEELSQLRKKYGFLLVIDDAHGTFVCG 294 (476)
T ss_pred EEeC-------CCCHHHHHHHHHhCC---CCce-EEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEEcccccCceec
Confidence 7776 458999999997642 1334 444555 889999999 999999999999999999999988875
Q ss_pred CC--CcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc--cCC-Ch-HHHHHHHHhhC
Q 019899 146 NE--EFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--CSI-SA-PTQRLLISMLS 219 (334)
Q Consensus 146 ~~--~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--~~~-~~-~~~~~~~~~l~ 219 (334)
.. +......+ ..+.+++++||+|++|..| |++++ ++++++.++..... ++. .+ ....++.+.+
T Consensus 295 ~~G~G~~e~~g~------~~di~ii~~TLsKA~G~~G---Gfi~g-s~~~~~~l~~~~~~~ifStalpp~~aaa~laal- 363 (476)
T PLN02955 295 ENGGGVAEEFNC------EADVDLCVGTLSKAAGCHG---GFIAC-SKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAV- 363 (476)
T ss_pred CCCCcHHHHhCC------CCCCcEEEEeCccchhccC---ceeec-HHHHHHHHHHhCCCCeecccccHHHHHHHHHHH-
Confidence 42 33332222 2577899999999998665 99888 77888988865443 222 22 2222222222
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCc
Q 019899 220 DTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSAC 299 (334)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~ 299 (334)
+.+.. -..++++++++.+++.+. .|+.+. ..++.+.+... ....++.+.|++ +||.+.+-.+.
T Consensus 364 --~l~~~-~~~~r~~L~~n~~~fr~~---~G~~~~----sPI~pI~ig~~------~~a~~~~~~L~~-~Gi~v~~i~yP 426 (476)
T PLN02955 364 --VVARK-EKWRRKAIWERVKEFKAL---SGVDIS----SPIISLVVGNQ------EKALKASRYLLK-SGFHVMAIRPP 426 (476)
T ss_pred --HHHhc-CHHHHHHHHHHHHHHHHh---cCCCCC----CCEEEEEeCCH------HHHHHHHHHHHH-CCCEEEEECCC
Confidence 21111 134667788888888874 366531 22233333332 244567888555 79999876654
Q ss_pred CCC-CCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 300 HCI-EPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 300 ~~~-~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
... ....+|++++. .+++|++++++.|.++.+.
T Consensus 427 tVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~~ 461 (476)
T PLN02955 427 TVPPNSCRLRVTLSAAHTTEDVKKLITALSSCLDF 461 (476)
T ss_pred CCCCCCceEEEeeCCCCCHHHHHHHHHHHHHHHhh
Confidence 332 24579999986 6999999999999987653
No 199
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.92 E-value=5e-23 Score=184.78 Aligned_cols=282 Identities=20% Similarity=0.241 Sum_probs=202.2
Q ss_pred hhhhhcCCCCCCC-CcEEEecCcHHHHHHHHHHh---cCCCCeEEecCCCCCChhhhhh---hccCcEEEEEeCCCCCCc
Q 019899 5 MSQVLGQAVSFDP-SQIVLTAGATPAVEILCFCL---ADHGNALLVPSPYYPGFDRDIR---FRTGVELIPVHCRSTDNF 77 (334)
Q Consensus 5 ~~~~~~~~~~~~~-~~i~~~~g~~~~~~~~~~~l---~~~gd~vl~~~p~~~~~~~~~~---~~~g~~v~~v~~~~~~~~ 77 (334)
.++.+++.+++++ ++|++++|++.+++.++.++ .++||+|++.+..|++....+. ...|.++..++.+ .+.
T Consensus 48 ~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~--~~~ 125 (371)
T PF00266_consen 48 AREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPAD--PGG 125 (371)
T ss_dssp HHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEG--TTS
T ss_pred HHHHHHHhcCCccccccccccccchhhhhhhhccccccccccccccccccccccccccccccccchhhhcccccc--ccc
Confidence 3445566667788 89999999999999999999 7899999999999998774433 1568999999874 445
Q ss_pred cccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhh
Q 019899 78 AFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILE 157 (334)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~ 157 (334)
.+|++++++++++ +++++++++.+|.||..+| +++|.++|+++|+++++|.+++. +.....+..
T Consensus 126 ~~~~~~~~~~l~~------~~~lv~~~~~~~~tG~~~p---i~~I~~~~~~~~~~~~vD~~~~~----g~~~id~~~--- 189 (371)
T PF00266_consen 126 SLDLEDLEEALNP------DTRLVSISHVENSTGVRNP---IEEIAKLAHEYGALLVVDAAQSA----GCVPIDLDE--- 189 (371)
T ss_dssp SCSHHHHHHHHHT------TESEEEEESBETTTTBBSS---HHHHHHHHHHTTSEEEEE-TTTT----TTSS--TTT---
T ss_pred hhhhhhhhhhhcc------ccceEEeecccccccEEee---eceehhhhhccCCceeEechhcc----ccccccccc---
Confidence 7899999999975 9999999999999999999 99999999999999999999875 222223221
Q ss_pred ccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc-----------------------cCCChHHHHHH
Q 019899 158 AEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF-----------------------CSISAPTQRLL 214 (334)
Q Consensus 158 ~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~ 214 (334)
.+.++++.|.+|.+|.+| +|+++. +++..++++..... ++.+.....++
T Consensus 190 -----~~~D~~~~s~~Kl~gp~G--~g~l~v-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l 261 (371)
T PF00266_consen 190 -----LGADFLVFSSHKLGGPPG--LGFLYV-RPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYAL 261 (371)
T ss_dssp -----TTESEEEEESTSTTSSST--EEEEEE-EHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHH
T ss_pred -----cccceeeecccccCCCCc--hhhhee-hhhhhhccccccccccccccccchhcccccccccccccceeeehhhhH
Confidence 567789999999445444 799998 77777777432111 13344444555
Q ss_pred HHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CcccCC----CceeEEeeecCCcCCCCChhhHHHHHHHHHHhc
Q 019899 215 ISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLG-IRCSES----SAGLYCWADMSGLIPSYSEKGELELWDKLLNIA 289 (334)
Q Consensus 215 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 289 (334)
..+++... +..+++..++..+..+++.+.|++.+ +.+..+ ..+-.+.+.++.. +..++... |+++
T Consensus 262 ~~al~~~~--~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------~~~~~~~~-L~~~ 331 (371)
T PF00266_consen 262 NEALKLLE--EIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFNLPGS-------DADDVVKY-LEER 331 (371)
T ss_dssp HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEETTS-------SHHHHHHH-HHHH
T ss_pred HHHHhhhh--ccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEeecCC-------CHHHHHHH-Hhhc
Confidence 55554321 33457778888999999999998874 444332 2233344555442 34577777 4445
Q ss_pred CeEEcCCCCcCC------CCCCeEEEEecC-CCcccHHHH
Q 019899 290 KINVTPGSACHC------IEPGWFRCCFTS-LTHEDIPLV 322 (334)
Q Consensus 290 gi~v~~g~~~~~------~~~~~iRi~~~~-~~~~~l~~~ 322 (334)
||.+..|..+.. .-.+.+|+|++. .|++|++++
T Consensus 332 ~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 332 GIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp TEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred CEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 999998877641 123799999996 588999874
No 200
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.92 E-value=1.6e-22 Score=183.40 Aligned_cols=284 Identities=17% Similarity=0.138 Sum_probs=184.8
Q ss_pred CCcEEEecCcHHHHHHHHHHhc----------CCCCeEEecCCCCCChhhh-hhhccCcEEEE---EeCCC--CCCcccc
Q 019899 17 PSQIVLTAGATPAVEILCFCLA----------DHGNALLVPSPYYPGFDRD-IRFRTGVELIP---VHCRS--TDNFAFS 80 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~----------~~gd~vl~~~p~~~~~~~~-~~~~~g~~v~~---v~~~~--~~~~~~~ 80 (334)
.+.+++++++++|+..++..+. ..+++|++.+.+|.+.... +. ..+..... .+... ..-...|
T Consensus 88 ~~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d 166 (400)
T PTZ00125 88 YDKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACS-ASTDPKCYNNFGPFVPGFELVDYND 166 (400)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHh-hcCCcchhccCCCCCCCceEeCCCC
Confidence 4689999999999999998763 1346788888777665433 33 22211110 00000 0001137
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCH-HHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPR-ETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~-~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
++++++.++. .++++|++..++||+|.+++. +.+++|.++|++||+++|+||+|.++.+.|..+.. ...
T Consensus 167 ~~~le~~l~~-----~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~--~~~--- 236 (400)
T PTZ00125 167 VEALEKLLQD-----PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAH--DHE--- 236 (400)
T ss_pred HHHHHHHhCC-----CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHH--Hhc---
Confidence 8999998862 278988888779999999975 45999999999999999999999876555432111 111
Q ss_pred ccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHHh--hcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHH
Q 019899 160 EVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKKL--TRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIK 236 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 236 (334)
+..++ +.++||.++ .| .|+||+++ ++++.+.+... ...++.++..+.++.+.++..+ ++ ...++++
T Consensus 237 ~~~pd----~~~~sK~l~-~g~~~ig~v~~-~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~--~~---~~~~~~~ 305 (400)
T PTZ00125 237 GVKPD----IVLLGKALS-GGLYPISAVLA-NDDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLK--EE---KLAENAQ 305 (400)
T ss_pred CCCCC----EEEEccccc-CCCcCcEEEEE-cHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHH--hc---CHHHHHH
Confidence 11122 235789998 55 49999998 78888877543 3345677888877766654321 11 1233444
Q ss_pred HHHHHHHHHHHhC----CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEec
Q 019899 237 KLYDSFVAGLKQL----GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFT 312 (334)
Q Consensus 237 ~~~~~~~~~l~~~----g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~ 312 (334)
++.+++.+.|++. ++.......|.++|+.++.... .+..++...|+ ++||.+.|+. ++++|++++
T Consensus 306 ~~~~~l~~~l~~l~~~~~~~~~~~~~g~~~~v~~~~~~~----~~~~~~~~~l~-~~Gv~v~~~~------~~~lRi~~~ 374 (400)
T PTZ00125 306 RLGEVFRDGLKELLKKSPWVKEIRGKGLLNAIVFDHSDG----VNAWDLCLKLK-ENGLLAKPTH------DNIIRFAPP 374 (400)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEecccEEEEEEEccCcc----hHHHHHHHHHH-HCCeEEeecC------CCEEEEECC
Confidence 4555555555543 3221112356777787764211 23457888865 5799998753 478999976
Q ss_pred C-CCcccHHHHHHHHHHHHHHc
Q 019899 313 S-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 313 ~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
. .+++++++++++|.+++++.
T Consensus 375 ~~~~~~~i~~~l~~l~~~l~~~ 396 (400)
T PTZ00125 375 LVITKEQLDQALEIIKKVLKSF 396 (400)
T ss_pred ccCCHHHHHHHHHHHHHHHHHH
Confidence 4 69999999999999998764
No 201
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.92 E-value=2.2e-22 Score=180.86 Aligned_cols=282 Identities=17% Similarity=0.238 Sum_probs=184.2
Q ss_pred hhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhh----hhhhccCcEEEEEeCCCCCCccc
Q 019899 4 FMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDR----DIRFRTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~~g~~v~~v~~~~~~~~~~ 79 (334)
-+.+.++...+ .++.+++++++.++..++.+++++||+|+++...|++... .++ ..|.+++.++. .
T Consensus 74 ~le~~lA~l~g--~~~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~-~~G~~v~~vd~-------~ 143 (403)
T PRK07810 74 MFEERLRLIEG--AEACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILP-RWGVETVFVDG-------E 143 (403)
T ss_pred HHHHHHHHHhC--CCcEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHH-HcCcEEEEECC-------C
Confidence 34455554444 4588999999999999999999999999999877755443 344 57999999874 3
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
|++++++++++ ++++|++++|+||+|.+.| +++|+++|+++|+++++|++|+...+. .++ .
T Consensus 144 d~~~l~~ai~~------~tklV~~esp~Nptg~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~----~~~----~-- 204 (403)
T PRK07810 144 DLSQWEEALSV------PTQAVFFETPSNPMQSLVD---IAAVSELAHAAGAKVVLDNVFATPLLQ----RGL----P-- 204 (403)
T ss_pred CHHHHHHhcCc------CceEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCCccccC----Chh----h--
Confidence 78999999976 7899999999999999999 999999999999999999999753321 111 1
Q ss_pred ccCCCcEEEEecccccCCCCCceE-EEEeecCHHHH-HHHHHhhcc--cCCChHHHHHHHHhhCChHHHHHHHHHHHHHH
Q 019899 160 EVDKDRVHIIYGLSKDLSLPGFRT-GVIYSYNESVL-AAAKKLTRF--CSISAPTQRLLISMLSDTKFIQEYLETNKRRI 235 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~g~r~-g~i~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 235 (334)
.+.++++.|++|.++..|.++ |++++ +++.. +.++..... ...++..+..+...++.. ..+.++.
T Consensus 205 ---~gaDivv~S~tK~l~g~g~~~gG~v~~-~~~~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~tl-------~~R~~~~ 273 (403)
T PRK07810 205 ---LGADVVVYSGTKHIDGQGRVLGGAILG-DREYIDGPVQKLMRHTGPALSAFNAWVLLKGLETL-------ALRVRHS 273 (403)
T ss_pred ---cCCcEEEccCCceecCCcCceeEEEEe-ChHHHHHHHHHHHHHhCCCCCHHHHHHHHhccCcH-------HHHHHHH
Confidence 456788999999998778776 77777 54443 345443222 245555555555555442 3344455
Q ss_pred HHHHHHHHHHHHhC-CCccc-------CC----------CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCe------
Q 019899 236 KKLYDSFVAGLKQL-GIRCS-------ES----------SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKI------ 291 (334)
Q Consensus 236 ~~~~~~~~~~l~~~-g~~~~-------~~----------~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi------ 291 (334)
.++...+.+.|+++ .+..+ .| ..|-.+.+++....+. ..+...++++. ++-..+
T Consensus 274 ~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~-~~~~~~~f~~~-l~l~~~~~slG~ 351 (403)
T PRK07810 274 NASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDAPEDA-AKKRAFEVLDK-LRVIDISNNLGD 351 (403)
T ss_pred HHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCCCc-CHHHHHHHHHh-CCceEEeccCCC
Confidence 56666677777765 23211 01 2343455666532110 11222344443 221221
Q ss_pred ----EEcCCCCcCC-----------CCCCeEEEEecCCCcccHHHHHHHHHHHH
Q 019899 292 ----NVTPGSACHC-----------IEPGWFRCCFTSLTHEDIPLVIERIQKVA 330 (334)
Q Consensus 292 ----~v~~g~~~~~-----------~~~~~iRi~~~~~~~~~l~~~l~~l~~~~ 330 (334)
...|+...+. ..++-+|+|++ .|+.+.+++.|.+++
T Consensus 352 ~~sl~~~p~~~~h~~~~~~~~~~~gi~~~lvR~svG---lE~~~dli~dl~~Al 402 (403)
T PRK07810 352 AKSLITHPATTTHRAMGPEGRAAIGLGDGVVRLSVG---LEDTDDLIADLDRAL 402 (403)
T ss_pred CcceeeCCCccccccCCHHHHHhcCCCCCeEEEEec---cCCHHHHHHHHHHhh
Confidence 2223221110 02357999999 778888999888876
No 202
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.92 E-value=1.8e-22 Score=183.02 Aligned_cols=278 Identities=13% Similarity=0.114 Sum_probs=188.7
Q ss_pred CCCCCCCCcEEEecCcHHHHHHHHHHhcCCC---CeEEecCCCCCChhhhh----hhccCcEE----EEEeCCCCCCccc
Q 019899 11 QAVSFDPSQIVLTAGATPAVEILCFCLADHG---NALLVPSPYYPGFDRDI----RFRTGVEL----IPVHCRSTDNFAF 79 (334)
Q Consensus 11 ~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~g---d~vl~~~p~~~~~~~~~----~~~~g~~v----~~v~~~~~~~~~~ 79 (334)
+.+++++++|++++|+|++++.++.++++++ +.|++++.+|++....+ + ..|.++ +.++. ++++.+
T Consensus 80 ~l~g~~~~~v~~~~~~t~~l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~-~~g~~~~~~~~~~~~--~~~g~~ 156 (406)
T TIGR01814 80 RLVGAKEDEVVVMNTLTINLHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQ-LHGLTVEESMVQIEP--REEETL 156 (406)
T ss_pred cccCCCCCcEEEeCCchHHHHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHH-hcCCCcccceEEecc--CCCCcc
Confidence 5678889999999999999999999886554 36888889999854433 3 568776 34544 344567
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
+++++++.++.. ..++++|++++++|+||.+.| +++|.++|+++|+++++|++++. |....++. .
T Consensus 157 ~~~~l~~~~~~~---~~~t~lv~~~~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~~----G~~~id~~---~-- 221 (406)
T TIGR01814 157 RLEDILDTIEKN---GDDIAVILLSGVQYYTGQLFD---MAAITRAAHAKGALVGFDLAHAV----GNVPLDLH---D-- 221 (406)
T ss_pred CHHHHHHHHHhc---CCCeEEEEEeccccccceecC---HHHHHHHHHHcCCEEEEEccccc----CCcccccc---c--
Confidence 899999888632 237899999999999999999 99999999999999999999986 22222222 1
Q ss_pred ccCCCcEEEEecccccCC-CCCceEEEEeecCHHHHHHHHHh-h------------------------cccCCChHHHHH
Q 019899 160 EVDKDRVHIIYGLSKDLS-LPGFRTGVIYSYNESVLAAAKKL-T------------------------RFCSISAPTQRL 213 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~-~~g~r~g~i~~~~~~~~~~~~~~-~------------------------~~~~~~~~~~~~ 213 (334)
.+.++++.|.+|+++ .+| .|..+. ++.. ..+... . ..++.+.....+
T Consensus 222 ---~gvD~~~~s~hK~l~g~pG--~~l~v~-~~~~-~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~ 294 (406)
T TIGR01814 222 ---WGVDFACWCTYKYLNAGPG--AGAFVH-EKHA-HTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAA 294 (406)
T ss_pred ---CCCCEEEEcCccccCCCCC--eEEEEe-hhhh-hhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHH
Confidence 567889999999884 344 333333 3222 222110 0 012344455555
Q ss_pred HHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCcccCCCc----eeEEeeecCCcCCCCChhhHHHHHHH
Q 019899 214 LISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-----GIRCSESSA----GLYCWADMSGLIPSYSEKGELELWDK 284 (334)
Q Consensus 214 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----g~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (334)
+..+++... +..+++.+++.....+++.+.|++. ++++..+.. +..+.+.+| . +..++.+.
T Consensus 295 l~~al~~~~--~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~--~------~~~~~~~~ 364 (406)
T TIGR01814 295 LRGSLDIFD--QAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP--V------PGKAVFQA 364 (406)
T ss_pred HHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec--C------CHHHHHHH
Confidence 555554321 2224666777888888888888764 366554421 223445555 1 23567777
Q ss_pred HHHhcCeEEcCCCCcCCCCCCeEEEEe-c-CCCcccHHHHHHHHHHHH
Q 019899 285 LLNIAKINVTPGSACHCIEPGWFRCCF-T-SLTHEDIPLVIERIQKVA 330 (334)
Q Consensus 285 ll~~~gi~v~~g~~~~~~~~~~iRi~~-~-~~~~~~l~~~l~~l~~~~ 330 (334)
| .++||.+... .++.+|+|+ + +.+++|++++++.|++++
T Consensus 365 L-~~~gi~v~~~------~~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 365 L-IKRGVIGDKR------EPSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred H-HHCCEEEecc------CCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 4 5579987532 236899998 4 369999999999999875
No 203
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.92 E-value=7.6e-22 Score=176.53 Aligned_cols=281 Identities=16% Similarity=0.191 Sum_probs=182.6
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhh--hccCcEEEEEeCCCCCCccccHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIR--FRTGVELIPVHCRSTDNFAFSIT 82 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~--~~~g~~v~~v~~~~~~~~~~~~~ 82 (334)
+.+.++...+ .+++++++++++|+..++.+++++||+|+++.|+|.++...++ ...|.+++.++ +|++
T Consensus 58 lE~~lA~l~g--~~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~--------~d~~ 127 (385)
T PRK08574 58 LEEALAKLEG--GVDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY--------PSTE 127 (385)
T ss_pred HHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC--------CCHH
Confidence 4445554444 4678899999999999999999999999999999999877664 14577776654 3578
Q ss_pred HHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccC
Q 019899 83 ALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVD 162 (334)
Q Consensus 83 ~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (334)
++++++++. ++++|++.+|+||||.++| +++|+++|+++|+++++|++|+.... ..++ .
T Consensus 128 ~l~~~i~~~-----~tklV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~~----~~~l----~----- 186 (385)
T PRK08574 128 DIIEAIKEG-----RTKLVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPLL----YRPL----R----- 186 (385)
T ss_pred HHHHhcCcc-----CceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCcccc----CChh----h-----
Confidence 888888642 6899999999999999999 88999999999999999999864211 1111 1
Q ss_pred CCcEEEEecccccCCCCCce-EEEEeecCHHHHHHHHHhhcccC--CChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHH
Q 019899 163 KDRVHIIYGLSKDLSLPGFR-TGVIYSYNESVLAAAKKLTRFCS--ISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLY 239 (334)
Q Consensus 163 ~~~~~~~~s~sK~~~~~g~r-~g~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (334)
.+.+++++|++|.++.+|-. .|++++.++++.+.++.....++ .++.....+..-++. +..+.++..+++
T Consensus 187 ~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~t-------L~~R~~~~~~na 259 (385)
T PRK08574 187 HGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIMQPFEAYLVLRGLKT-------LEVRFERQCRNA 259 (385)
T ss_pred hCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCc-------HHHHHHHHHHHH
Confidence 45678999999999756644 47677667888888776554332 333333333333322 233344555567
Q ss_pred HHHHHHHHhCC-Cc---ccC--------------C--CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCc
Q 019899 240 DSFVAGLKQLG-IR---CSE--------------S--SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSAC 299 (334)
Q Consensus 240 ~~~~~~l~~~g-~~---~~~--------------~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~ 299 (334)
..+.+.|+.+. ++ ++. . ..|-.+.+++... .+....+.+. ++-..+...-|...
T Consensus 260 ~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~~~-----~~~~~~~~~~-l~l~~~~~s~G~~~ 333 (385)
T PRK08574 260 MAIAEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVKGG-----RDAVLKFLRS-LKLIKPSPSLGGVE 333 (385)
T ss_pred HHHHHHHHcCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeCCC-----HHHHHHHHHc-CCcceEccCCCCCc
Confidence 77777777652 21 110 0 1233445666421 1222334443 22222222222221
Q ss_pred CC---------------------CCCCeEEEEecCCCcccHHHHHHHHHHHHHH
Q 019899 300 HC---------------------IEPGWFRCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 300 ~~---------------------~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
.. ..++-+|+|++ -|+.+.+++.|.+++++
T Consensus 334 sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svG---lE~~~dli~dl~~al~~ 384 (385)
T PRK08574 334 SLATYPVKSAASPIPEEDRKALGITEDLVRLSVG---LEDVEDLIEDLDQALGS 384 (385)
T ss_pred ceeeCCCcCCcccCCHHHHHhcCCCCCeEEEEec---cCCHHHHHHHHHHHHhc
Confidence 00 01357999999 67788899999988864
No 204
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.92 E-value=3e-22 Score=178.97 Aligned_cols=280 Identities=16% Similarity=0.196 Sum_probs=187.9
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhh---hccCcEEEEEeCCCCCCccccH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIR---FRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~---~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
+.+.+++..+. ++++++++++.++..++. ++++||+|+++.+.|.++...+. ...|.+++.++. .|+
T Consensus 52 le~~la~l~g~--~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~-------~d~ 121 (378)
T TIGR01329 52 LESLLAKLDKA--DRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDT-------TDL 121 (378)
T ss_pred HHHHHHHHhCC--CcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCC-------CCH
Confidence 34444444443 677778888889988776 77999999999999998765433 147999999985 278
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
+++++++++ ++++|++++|+||+|.+.+ +++|+++|+++|+++|+|++|... ....++ .
T Consensus 122 ~~le~~i~~------~tklv~le~psnptg~v~d---l~~I~~la~~~g~~vivD~a~~~~----~~~~~l----~---- 180 (378)
T TIGR01329 122 DKVKAALGP------KTKLVLLESPTNPLQKIVD---IRKISEMAHAQNALVVVDNTMMSP----LLCNPL----E---- 180 (378)
T ss_pred HHHHHhcCc------CceEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCccc----ccCChh----h----
Confidence 899998875 8999999999999999999 999999999999999999997531 111122 1
Q ss_pred CCCcEEEEecccccCCC-CCceEEEEeecCHHHHHHHHHhhccc--CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 162 DKDRVHIIYGLSKDLSL-PGFRTGVIYSYNESVLAAAKKLTRFC--SISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~-~g~r~g~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
.+.+++++|++|+++. .+...|+++++++.+.++++...... ..++.....+..-++. +..+.++..++
T Consensus 181 -~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~~~~l~t-------l~~R~e~~~~n 252 (378)
T TIGR01329 181 -LGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLAPFDCWLLLRGIKT-------LAIRIEKQQEN 252 (378)
T ss_pred -cCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCCHHHHHHHHccCCC-------HHHHHHHHHHH
Confidence 3557899999998853 35778999886777767776655432 2333333222222222 23344455556
Q ss_pred HHHHHHHHHhCC-Cc--------------cc---CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcC
Q 019899 239 YDSFVAGLKQLG-IR--------------CS---ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACH 300 (334)
Q Consensus 239 ~~~~~~~l~~~g-~~--------------~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~ 300 (334)
...+.+.|+++. +. +. ....|-.+.+++.. .....++.+. ++..+|.++-|....
T Consensus 253 a~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~------~~~~~~~~~~-L~~~~i~~s~G~~~s 325 (378)
T TIGR01329 253 ARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGS------VALSKRLVEA-TKLFSITVSFGSVNS 325 (378)
T ss_pred HHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECC------HHHHHHHHHh-CcCcccccCCCCCCc
Confidence 666666666541 11 00 01122344456621 1224577777 576787777666431
Q ss_pred C---------------------CCCCeEEEEecCCCcccHHHHHHHHHHHHHHc
Q 019899 301 C---------------------IEPGWFRCCFTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 301 ~---------------------~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
. ..++-+|+|++ -|+.+++++.|.+++++.
T Consensus 326 l~~~p~~~~~~~~~~~~~~~~gi~~~liR~svG---lE~~~dl~~dl~~al~~~ 376 (378)
T TIGR01329 326 LISMPCFMSHASIPAEVREERGLPEDLVRLSVG---IEDVDDLISDLDIAFVTA 376 (378)
T ss_pred eeeCCCccccccCCHHHHHhcCCCCCeEEEEec---cCCHHHHHHHHHHHHHhc
Confidence 1 01357999999 778888999999988763
No 205
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.91 E-value=1.9e-22 Score=183.51 Aligned_cols=295 Identities=12% Similarity=0.062 Sum_probs=189.2
Q ss_pred CcEEEecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChhhhhhhccCcE--------------EEE--EeCCCCCCccc
Q 019899 18 SQIVLTAGATPAVEILCFCLA--DHGNALLVPSPYYPGFDRDIRFRTGVE--------------LIP--VHCRSTDNFAF 79 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~~g~~--------------v~~--v~~~~~~~~~~ 79 (334)
+.+++++++++|+..++.... .++.+|+...++|.+....+. ..+.. +.. +|... .+...
T Consensus 103 ~~~~f~~sGsea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~ 180 (425)
T PRK08088 103 KKTLLVTTGSEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTL-ALTGKVNPYSAGMGLMPGHVYRALYPCPL-HGVSE 180 (425)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHhCCCeEEEECCccCCccHHHH-HhhCCCCccccCCCCCCCCcEEcCCCccc-cCccH
Confidence 578888888888777765542 233457777999988765544 32211 111 22111 11111
Q ss_pred --cHHHHHHHHHHHHHcCCceeEEEEeCC-CCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhh
Q 019899 80 --SITALDQAFNQARKRGVKVRGILICNP-ANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEIL 156 (334)
Q Consensus 80 --~~~~l~~~l~~~~~~~~~~~~i~~~~p-~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~ 156 (334)
+++.+++.+++. ....++.++++... ++++....+.+.+++|.++|++||+++|+||+|.++.+.+. ...+ .
T Consensus 181 ~~~~~~l~~~l~~~-~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~-~~~~---~ 255 (425)
T PRK08088 181 DDAIASIERIFKND-AAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGT-LFAM---E 255 (425)
T ss_pred HHHHHHHHHHHHhc-cCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcc-hhHH---h
Confidence 145577777531 11235665555433 55666678999999999999999999999999998655432 1111 1
Q ss_pred hccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh--hcccCCChHHHHHHHHhhCChHHHHHHHHHHHHH
Q 019899 157 EAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL--TRFCSISAPTQRLLISMLSDTKFIQEYLETNKRR 234 (334)
Q Consensus 157 ~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 234 (334)
. .+.+..+.||||.++ +|+|+||+++ ++++++.+... ...++.+++.+.++..+++..+. ++.+.+.++.
T Consensus 256 ~-----~~~~pdi~s~sK~l~-~G~rig~v~~-~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~ 327 (425)
T PRK08088 256 Q-----MGVAADLTTFAKSIA-GGFPLAGVTG-RAEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQ-ENLLQKANAL 327 (425)
T ss_pred h-----cCCCCCEEEEecccc-CCCcceeeEe-cHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHh-cCHHHHHHHH
Confidence 1 233344789999998 9999999999 88888887643 33466789999999999976542 3444555544
Q ss_pred HHHHHHHHHHHHHhCCC-cccCCCceeEEeeecCCcCCC--CChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEe
Q 019899 235 IKKLYDSFVAGLKQLGI-RCSESSAGLYCWADMSGLIPS--YSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCF 311 (334)
Q Consensus 235 ~~~~~~~~~~~l~~~g~-~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~ 311 (334)
.+...+.+.+.+++.+. ....+. |+++|+.+.+..+. .......++...++ ++||.+.|+..+ ++.+|+++
T Consensus 328 ~~~~~~~l~~l~~~~~~~~~v~g~-G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~-~~Gv~~~~~~~~----~~~iRl~~ 401 (425)
T PRK08088 328 GEKLKDGLLAIAEKHPEIGDVRGL-GAMIAIELFEDGDHSKPNAKLTAQIVARAR-DKGLILLSCGPY----YNVLRILV 401 (425)
T ss_pred HHHHHHHHHHHHHhCCCeEEEecc-ceEEEEEEecCCCCCCCCHHHHHHHHHHHH-hCCCEEecCCCC----CCEEEEEC
Confidence 44444444444344433 112222 88899998543221 11223456777754 479988775443 47899999
Q ss_pred cC-CCcccHHHHHHHHHHHHHHc
Q 019899 312 TS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 312 ~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
+. .+++++++++++|.+++++.
T Consensus 402 ~~~~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 402 PLTIEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred CCCcCHHHHHHHHHHHHHHHHhh
Confidence 84 68999999999999998764
No 206
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.91 E-value=2e-22 Score=182.37 Aligned_cols=283 Identities=14% Similarity=0.136 Sum_probs=193.0
Q ss_pred CCcEEEecCcHHHHHHHHHHhc--------CCCCeEEecCCCCCChhhhhhhccCcEEEE---EeCCC--CCCccccHHH
Q 019899 17 PSQIVLTAGATPAVEILCFCLA--------DHGNALLVPSPYYPGFDRDIRFRTGVELIP---VHCRS--TDNFAFSITA 83 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~--------~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~---v~~~~--~~~~~~~~~~ 83 (334)
.+.+++++++++|+..++.... .++.+|+..+.+|.+.........+..... .++.+ ......|++.
T Consensus 96 ~~~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 175 (406)
T PRK12381 96 ADRVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNS 175 (406)
T ss_pred CCeEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHH
Confidence 4799999999999999988752 245678888888887654332123321110 01000 0001247888
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCcccCC--CHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVGNII--PRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~--~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
+++.+++ ++++|++ .|.+++|-++ |.+.+++|.++|++||+++|+||+|.++.+.|..+ ..... +.
T Consensus 176 l~~~l~~------~~aavii-EPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~-~~~~~----~v 243 (406)
T PRK12381 176 ASALIDD------QTCAVIV-EPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELY-AYMHY----GV 243 (406)
T ss_pred HHHhccC------CeeEEEE-eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchh-hhHhh----CC
Confidence 9988864 6776666 6988887654 68899999999999999999999998876655422 11111 11
Q ss_pred CCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh--hcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHH
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL--TRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLY 239 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (334)
.++ +.|++|.++ +|+|+||+++ ++++.+.+... ...++.+++.+.++.+.++.. + ..+..++++++.
T Consensus 244 ~pD----i~t~sK~l~-gG~~ig~~~~-~~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l---~--~~~~~~~~~~~~ 312 (406)
T PRK12381 244 TPD----VLTTAKALG-GGFPIGAMLT-TEKCASVMTVGTHGTTYGGNPLASAVAGKVLELI---N--TPEMLNGVKQRH 312 (406)
T ss_pred CCC----EEEehhhhh-CCCceEEEEE-cHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHH---h--hccHHHHHHHHH
Confidence 122 358999998 8999999998 78888887642 334577888888888876432 1 124567777888
Q ss_pred HHHHHHHHhCC--Cccc--CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-C
Q 019899 240 DSFVAGLKQLG--IRCS--ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS-L 314 (334)
Q Consensus 240 ~~~~~~l~~~g--~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~ 314 (334)
+++.+.|++.+ ..+. ....|.++++.++.... .....+... +.++||.+.+.. ++++|++++. .
T Consensus 313 ~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~~~----~~~~~~~~~-l~~~Gv~v~~~g------~~~lRl~p~~~~ 381 (406)
T PRK12381 313 DWFVERLNTINARYGLFSEIRGLGLLIGCVLNAEYA----GKAKQISQE-AAKAGVMVLIAG------PNVVRFAPALNI 381 (406)
T ss_pred HHHHHHHHHHHhhCCCEEEEecCeEEEEEEecCchh----hHHHHHHHH-HHHCCcEEeeCC------CCEEEEeCCccC
Confidence 88888887753 2211 22347778888765311 123456666 556899987532 4689999885 6
Q ss_pred CcccHHHHHHHHHHHHHHc
Q 019899 315 THEDIPLVIERIQKVAETC 333 (334)
Q Consensus 315 ~~~~l~~~l~~l~~~~~~~ 333 (334)
+++++++++++|.+++++.
T Consensus 382 t~~~i~~~~~~l~~~l~~~ 400 (406)
T PRK12381 382 SEEEITTGLDRFARACERF 400 (406)
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998753
No 207
>PRK07505 hypothetical protein; Provisional
Probab=99.91 E-value=4.7e-22 Score=180.13 Aligned_cols=289 Identities=15% Similarity=0.157 Sum_probs=175.2
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc----CCCC-eEEecCCCC-CChh--hhhhhccCcEEEEEeCCCCCC
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLA----DHGN-ALLVPSPYY-PGFD--RDIRFRTGVELIPVHCRSTDN 76 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~----~~gd-~vl~~~p~~-~~~~--~~~~~~~g~~v~~v~~~~~~~ 76 (334)
+++.++..++. +.++++++++++..++..+. .+++ .|++.+..| ++.. .... ..+.+++.+|.
T Consensus 96 l~~~la~~~~~---~~~~~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~-~~~~~v~~~~~----- 166 (402)
T PRK07505 96 LEEALSELFGA---SVLTFTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGIC-ADETEVETIDH----- 166 (402)
T ss_pred HHHHHHHHhCC---CEEEECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhh-hcCCeEEEeCC-----
Confidence 44445444443 55555566678876665432 2222 355555444 3321 1222 23567777774
Q ss_pred ccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCc-chhhhh
Q 019899 77 FAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEF-VSMAEI 155 (334)
Q Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~-~~~~~~ 155 (334)
.|++++++++++ +++++++++|+||+|.+.+ +++|.++|+++++++|+||+|+...++.... .....+
T Consensus 167 --~d~~~l~~~~~~------~~~~~vl~~p~~~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~ 235 (402)
T PRK07505 167 --NDLDALEDICKT------NKTVAYVADGVYSMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSEL 235 (402)
T ss_pred --CCHHHHHHHHhc------CCCEEEEEecccccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHc
Confidence 378999988865 5688999999999999999 8888899999999999999986544432211 111111
Q ss_pred hhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhccc--C--CChHHHHHHHHhhCChHHHHHHHHHH
Q 019899 156 LEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFC--S--ISAPTQRLLISMLSDTKFIQEYLETN 231 (334)
Q Consensus 156 ~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~l~~~~~~~~~~~~~ 231 (334)
.. ..+++++++.|+||.++.+| ||+++.++++.+.++.....+ + .++....++...++.. .++++.++
T Consensus 236 ~~---~~~d~~i~~~s~sK~~~~~G---g~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~--~~~~~~~~ 307 (402)
T PRK07505 236 DY---RLNERTIIAASLGKAFGASG---GVIMLGDAEQIELILRYAGPLAFSQSLNVAALGAILASAEIH--LSEELDQL 307 (402)
T ss_pred CC---CCCCCeEEEEechhhhhccC---eEEEeCCHHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHH--hccCcHHH
Confidence 10 01677899999999998665 887755788888887654443 2 3344555555544311 12222334
Q ss_pred HHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC-CCCeEEEE
Q 019899 232 KRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI-EPGWFRCC 310 (334)
Q Consensus 232 ~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~-~~~~iRi~ 310 (334)
.++++++...+.+.+... .....-++.++.++. ..+..++.+.|+ ++||.+.+...+... .++++|++
T Consensus 308 ~~~l~~~~~~~~~~~~~~----~~g~~~~i~~~~~~~------~~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~lRi~ 376 (402)
T PRK07505 308 QQKLQNNIALFDSLIPTE----QSGSFLPIRLIYIGD------EDTAIKAAKQLL-DRGFYTSPVFFPVVAKGRAGLRIM 376 (402)
T ss_pred HHHHHHHHHHHHHHHHhc----CCCCCCCEEEEEeCC------HHHHHHHHHHHH-HCCCeEeeecCCCCCCCCceEEEe
Confidence 444555444433322111 111111222333221 123457888865 589999987433221 23689999
Q ss_pred ecC-CCcccHHHHHHHHHHHHHH
Q 019899 311 FTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 311 ~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
++. .++++++++++.|.+++++
T Consensus 377 ~~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 377 FRASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred cCccCCHHHHHHHHHHHHHHHHh
Confidence 985 5999999999999998865
No 208
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.91 E-value=1.9e-22 Score=182.85 Aligned_cols=280 Identities=18% Similarity=0.175 Sum_probs=188.2
Q ss_pred hhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcC---------CC-CeEEecCCCCCChhhhhhhccC-------------
Q 019899 7 QVLGQAVSFDPSQIVLTAGATPAVEILCFCLAD---------HG-NALLVPSPYYPGFDRDIRFRTG------------- 63 (334)
Q Consensus 7 ~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~---------~g-d~vl~~~p~~~~~~~~~~~~~g------------- 63 (334)
+.+....+ .+.+++++++++|+..++..+.. +| ++|++...+|.+....+. ..+
T Consensus 90 ~~l~~~~~--~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~-~~~~~~~~~~~~~~~~ 166 (401)
T PRK00854 90 EELAALTG--SHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIV-GFSTDPDARGGFGPFT 166 (401)
T ss_pred HHHHhhCC--CCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHH-hccCCccccccCCCCC
Confidence 33444333 46899999999999999988732 23 678877777765433222 111
Q ss_pred cEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHH-HHHHHHHHHHhcCcEEEEecccccc
Q 019899 64 VELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRE-TLYELLDFAREKNIHVISDEIYGGS 142 (334)
Q Consensus 64 ~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~-~l~~i~~~~~~~~~~vi~D~~~~~~ 142 (334)
.++..++ ..|++++++.+.+ ++++|++.+|+||+|.+.+.+ .+++|.++|++||+++|+||+|.++
T Consensus 167 ~~~~~~~-------~~d~~~le~~i~~------~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~ 233 (401)
T PRK00854 167 PGFRVVP-------FGDAEALEAAITP------NTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGL 233 (401)
T ss_pred CCeEEeC-------CCCHHHHHHHhCC------CeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCC
Confidence 1223333 2478999998865 789999999999999999854 5999999999999999999999865
Q ss_pred ccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHHh--hcccCCChHHHHHHHHhhC
Q 019899 143 IFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKKL--TRFCSISAPTQRLLISMLS 219 (334)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~ 219 (334)
.+.|..+. . ... +..++ +.+ ++|+++ .| +|+|++++ ++++.+.+... ...++.+++.+.++.+.++
T Consensus 234 g~~g~~~~-~-~~~---g~~~D--~~~--~~K~l~-gg~~~ig~v~~-~~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~ 302 (401)
T PRK00854 234 GRTGKLLA-E-EHE---GIEAD--VTL--IGKALS-GGFYPVSAVLS-NSEVLGVLKPGQHGSTFGGNPLACAVARAALK 302 (401)
T ss_pred CCCchHhH-H-hhc---CCCCC--EEE--eccccc-CCccCeEEEEE-cHHHHhcccCCCCCCCCCcCHHHHHHHHHHHH
Confidence 55442111 1 111 11122 222 469997 55 69999998 78888877632 2345668888888777775
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc---CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCC
Q 019899 220 DTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCS---ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPG 296 (334)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g 296 (334)
..+ + ....+.++++.+++.+.|++++.... .+.+.+ +.+.+... .....++.+.|++ +||.+.+.
T Consensus 303 ~l~---~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~g~~-~~i~~~~~-----~~~~~~~~~~L~~-~GV~v~~~ 370 (401)
T PRK00854 303 VLT---E--EGMIENAAEMGAYFLEGLRSIRSNIVREVRGRGLM-LAVELEPE-----AGGARQYCEALKE-RGLLAKDT 370 (401)
T ss_pred HHH---H--cCHHHHHHHHHHHHHHHHHhhccCceEEEeccceE-EEEEEecC-----chhHHHHHHHHHH-CCeEEecC
Confidence 422 1 22456777788888888887654322 333343 43444221 1134678888665 79998652
Q ss_pred CCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHH
Q 019899 297 SACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAE 331 (334)
Q Consensus 297 ~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~ 331 (334)
..+++|++++. .+++++++++++|++++.
T Consensus 371 ------~~~~lR~~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 371 ------HDHTIRLAPPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred ------CCCEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence 14689999864 699999999999998864
No 209
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.91 E-value=2.5e-22 Score=183.14 Aligned_cols=292 Identities=14% Similarity=0.156 Sum_probs=186.8
Q ss_pred CCcEEEecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChhhhhhhc--cCcEEEEEeCCC-------CCCc---cccHH
Q 019899 17 PSQIVLTAGATPAVEILCFCLA--DHGNALLVPSPYYPGFDRDIRFR--TGVELIPVHCRS-------TDNF---AFSIT 82 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~--~g~~v~~v~~~~-------~~~~---~~~~~ 82 (334)
.+++++++|+++|+..++.... ..+++|+..+++|.++...+... .+......+..+ .+.. ..|++
T Consensus 104 ~~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 183 (423)
T TIGR00713 104 VEMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLE 183 (423)
T ss_pred ccEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHH
Confidence 3689999999999999887642 35689999999999875433201 111111111100 0000 12789
Q ss_pred HHHHHHHHHHHcCCceeEEEEe-CCCCCcccCCC-HHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 83 ALDQAFNQARKRGVKVRGILIC-NPANPVGNIIP-RETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 83 ~l~~~l~~~~~~~~~~~~i~~~-~p~nptG~~~~-~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++. ..++++|++. .|+| +|.+.+ .+.+++|.++|++||+++|+||+|.++.++.........+
T Consensus 184 ~l~~~i~~~---~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~~~~~~~~~----- 254 (423)
T TIGR00713 184 ALEEVFEEY---GEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALGGAQEYFGV----- 254 (423)
T ss_pred HHHHHHHHc---CCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcchhHHHhCC-----
Confidence 999988742 2367777775 5566 798887 5889999999999999999999998874422111111111
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh-----hcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL-----TRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRI 235 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 235 (334)
.++ +.++||.++ +|+|+||+++ ++++.+.+... ...++.+++.+.++.+.++..+. +...++.++..
T Consensus 255 -~pD----i~t~sK~l~-~G~pig~v~~-~~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~-~~~~~~~~~~~ 326 (423)
T TIGR00713 255 -EPD----LTTLGKIIG-GGLPVGAFGG-RREIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDE-EGVYTELDELA 326 (423)
T ss_pred -Ccc----hhhhhhhhc-CCCceeeeeE-HHHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhc-ccHHHHHHHHH
Confidence 122 347999999 9999999998 78888888632 23456788888887777753221 12345555566
Q ss_pred HHHHHHHHHHHHhCCCccc-CCCceeEE-eeecCCcCCC-----CChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEE
Q 019899 236 KKLYDSFVAGLKQLGIRCS-ESSAGLYC-WADMSGLIPS-----YSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFR 308 (334)
Q Consensus 236 ~~~~~~~~~~l~~~g~~~~-~~~~g~~~-~~~~~~~~~~-----~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iR 308 (334)
...++.+.+.++++++... ...++++. ++..+...+. ........+...+++ +||.+.++. + +.+|
T Consensus 327 ~~~~~~l~~~~~~~~~~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~-~-----~~~~ 399 (423)
T TIGR00713 327 KRLAEGLSEVLEDTGIPHTVNRVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLD-KGVFLPPSQ-F-----EACF 399 (423)
T ss_pred HHHHHHHHHHHHhcCCCeEEEeeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHHH-CCeEEecCC-c-----ccee
Confidence 6666667777777766543 23344332 2332211100 001112356677665 899986542 2 3478
Q ss_pred EEecCCCcccHHHHHHHHHHHHHHc
Q 019899 309 CCFTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 309 i~~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
+++. .+++++++++++|.++++++
T Consensus 400 l~~~-~t~~~i~~~~~~l~~~l~~~ 423 (423)
T TIGR00713 400 LSAA-HTEEDIENTIEAAEEVFAEL 423 (423)
T ss_pred eECC-CCHHHHHHHHHHHHHHHhhC
Confidence 8877 79999999999999998753
No 210
>PRK05968 hypothetical protein; Provisional
Probab=99.91 E-value=6.6e-22 Score=177.45 Aligned_cols=278 Identities=14% Similarity=0.122 Sum_probs=186.4
Q ss_pred hhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhh----hhhhccCcEEEEEeCCCCCCccc
Q 019899 4 FMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDR----DIRFRTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~~g~~v~~v~~~~~~~~~~ 79 (334)
.+++.+++..+. +..+++++++.|+..++.+++++||+|+++.+.|.+... .+. ..|.+++.++. .
T Consensus 67 ~le~~lA~l~g~--~~av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~-~~G~~v~~vd~-------~ 136 (389)
T PRK05968 67 AFEEMLAKLEGA--EDARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILK-RMGVEVDYVDG-------R 136 (389)
T ss_pred HHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHH-HcCceEEEeCC-------C
Confidence 345555555543 345666777889999999999999999999999987543 344 57999988874 2
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
|++++++++ + ++++|++++|+||++.. .++++|+++|+++|+++|+|++|+...+.. +. .
T Consensus 137 d~~~l~~~i-~------~tklV~ie~pt~~~~~~---~dl~~i~~la~~~gi~vivD~a~a~~~~~~----p~----~-- 196 (389)
T PRK05968 137 DEEAVAKAL-P------GAKLLYLESPTSWVFEL---QDVAALAALAKRHGVVTMIDNSWASPVFQR----PI----T-- 196 (389)
T ss_pred CHHHHHHhc-c------cCCEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCcchhccC----ch----h--
Confidence 788888887 3 67899998777666555 559999999999999999999987543211 11 1
Q ss_pred ccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHHhhcc---cCCChHHHHHHHHhhCChHHHHHHHHHHHHHH
Q 019899 160 EVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKKLTRF---CSISAPTQRLLISMLSDTKFIQEYLETNKRRI 235 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 235 (334)
.+.++++.|++|.++.+| .+.|+++. ++++.+.++..... ...++.....+...++.. ..+.++.
T Consensus 197 ---~g~Divv~S~tK~l~g~~~~~gG~i~~-~~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~tl-------~~r~~~~ 265 (389)
T PRK05968 197 ---LGVDLVIHSASKYLGGHSDTVAGVVAG-SKEHIARINAEAYPYLGAKLSPFEAWLLLRGLRTL-------PLRMKAH 265 (389)
T ss_pred ---cCCcEEEeeccccccCCCCeEEEEEEE-CHHHHHHHHHHHHHhCCCCCChHHHHHHHcccCcH-------HHHHHHH
Confidence 345688889999997554 57888886 78888877754321 234554444444444332 3334445
Q ss_pred HHHHHHHHHHHHhC-CCcccC-C-----------CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCC-
Q 019899 236 KKLYDSFVAGLKQL-GIRCSE-S-----------SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHC- 301 (334)
Q Consensus 236 ~~~~~~~~~~l~~~-g~~~~~-~-----------~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~- 301 (334)
.++++.+.+.|+++ +++.+. | ..|-++.+++.. ..+..++++. |+..++.+.-|..+..
T Consensus 266 ~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~------~~~~~~f~~~-L~~~~~~~s~G~~~slv 338 (389)
T PRK05968 266 EASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFRE------GIDVRAFADA-LKLFRLGVSWGGHESLV 338 (389)
T ss_pred HHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECC------HHHHHHHHHh-CCccEEecCCCCCCcee
Confidence 55677777888776 444332 2 112234456642 1244577777 5656776665555440
Q ss_pred --------------------CCCCeEEEEecCCCcccHHHHHHHHHHHHHH
Q 019899 302 --------------------IEPGWFRCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 302 --------------------~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
..++.+|+|++ -|+.+.+++.|.+++++
T Consensus 339 ~p~~~~~~~~~~~~~~~~~gi~~~liR~SvG---lE~~~dl~~dl~~al~~ 386 (389)
T PRK05968 339 VPAEVVLQQKAQPNSAARFGVSPRSVRLHVG---LEGTEALWADLEQALAA 386 (389)
T ss_pred eeCcccccccCCHHHHHhcCCCCCeEEEEec---cCCHHHHHHHHHHHHHH
Confidence 01467999999 66777788888888765
No 211
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.91 E-value=4.1e-22 Score=178.95 Aligned_cols=276 Identities=15% Similarity=0.122 Sum_probs=188.2
Q ss_pred cEEEecCcHHHHHHHHHHhc--CCCCeEEecCCCCCC-hhhhhhhccCcEEEE--E--eCCC-CCCccccHHHHHHHHHH
Q 019899 19 QIVLTAGATPAVEILCFCLA--DHGNALLVPSPYYPG-FDRDIRFRTGVELIP--V--HCRS-TDNFAFSITALDQAFNQ 90 (334)
Q Consensus 19 ~i~~~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~-~~~~~~~~~g~~v~~--v--~~~~-~~~~~~~~~~l~~~l~~ 90 (334)
.+++++++++++..++.... .++++|++.+.+|.+ ....+. ..|.+... + .... ......|++.+++.+++
T Consensus 86 ~~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dl~~l~~~l~~ 164 (375)
T PRK04260 86 LAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMS-ATGQDKIKDGFGDGVPHFSYAIFNDLNSVKALVNK 164 (375)
T ss_pred EEEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHh-ccCCcccCCCCCCCCCCeEEeCCCCHHHHHHhcCC
Confidence 46899999999998887752 346678888777664 334433 32221110 0 0000 00012478899888754
Q ss_pred HHHcCCceeEEEEeCCCCCcccCCC-HHHHHHHHHHHHhcCcEEEEeccccccccCCCCcch-hhhhhhccccCCCcEEE
Q 019899 91 ARKRGVKVRGILICNPANPVGNIIP-RETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVS-MAEILEAEEVDKDRVHI 168 (334)
Q Consensus 91 ~~~~~~~~~~i~~~~p~nptG~~~~-~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 168 (334)
++.+|++..++|++|.+.+ .+.++++.++|+++|+++|+||+|.++...+..+.. ...+ .++
T Consensus 165 ------~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~------~pd---- 228 (375)
T PRK04260 165 ------NTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGI------EPD---- 228 (375)
T ss_pred ------CeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCC------CCC----
Confidence 6778888888999999765 567999999999999999999999876544432111 1112 122
Q ss_pred EecccccCCCCCceEEEEeecCHHHHHHHHH--hhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019899 169 IYGLSKDLSLPGFRTGVIYSYNESVLAAAKK--LTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGL 246 (334)
Q Consensus 169 ~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 246 (334)
+.||||.++ +|+|+||+++ ++++.+.+.. ....++.+++.+.++.++++..+. ++..++.++..+..++.+.+.+
T Consensus 229 i~t~sK~l~-~G~~ig~~~~-~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~ 305 (375)
T PRK04260 229 IFTLAKGLA-NGVPVGAMLA-KSSLGGAFGYGSHGSTFGGNKLSMAAASATLDIMLT-AGFLEQALENGNYLQEQLQKAL 305 (375)
T ss_pred EEEeccccc-CCcceEEEEE-cHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHH
Confidence 348999998 8999999999 7788777754 334567788999988888865432 3445566666666666666666
Q ss_pred HhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHH
Q 019899 247 KQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIER 325 (334)
Q Consensus 247 ~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~ 325 (334)
.+.+.-...+..|+++|++++. +..++.+. +.++||.+.|.. .+.+|++++. .+++++++++++
T Consensus 306 ~~~~~~~~~~~~g~~~~~~~~~--------~~~~~~~~-l~~~Gi~v~~~~------~~~lR~~~~~~~t~~~i~~~l~~ 370 (375)
T PRK04260 306 QDKETVTTVRGLGYMIGIETTA--------DLSQLVEA-ARDKGLIVLTAG------TNVIRLLPPLTLTKEEIEQGIAI 370 (375)
T ss_pred hhCCCeeEEeccceEEEEEecC--------cHHHHHHH-HHhCCCEEecCC------CCEEEEcCCCccCHHHHHHHHHH
Confidence 6553211222368889998843 23577777 445899997642 4679999964 699999999999
Q ss_pred HHHH
Q 019899 326 IQKV 329 (334)
Q Consensus 326 l~~~ 329 (334)
++++
T Consensus 371 l~~~ 374 (375)
T PRK04260 371 LSEV 374 (375)
T ss_pred HHHh
Confidence 9875
No 212
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.91 E-value=9.4e-22 Score=175.13 Aligned_cols=279 Identities=13% Similarity=0.130 Sum_probs=186.4
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhh----hhccCcEEEEEeCCCCCCcccc
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDI----RFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
+.+.++...+ .+++++++|+++|+..++.+++++||+|++++|.|++....+ . ..|.++..++.. +
T Consensus 55 lE~~lA~l~g--~~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~-~~gi~v~~~d~~-------~ 124 (377)
T TIGR01324 55 LQDAMCELEG--GAGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLK-RMGVDITYYDPL-------I 124 (377)
T ss_pred HHHHHHHHhC--CCcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHH-hcCcEEEEECCC-------C
Confidence 4445554333 568999999999999999999999999999999998766432 3 568888777531 2
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
.+.+++++++ ++++|++++|+||+|...+ +++|+++|+++|+++++|++|+.... ..++
T Consensus 125 ~e~l~~~i~~------~tklV~lesp~Np~g~~~d---l~~I~~la~~~g~~livD~t~a~g~~----~~pl-------- 183 (377)
T TIGR01324 125 GEDIATLIQP------NTKVLFLEAPSSITFEIQD---IPAIAKAARNPGIVIMIDNTWAAGLL----FKPL-------- 183 (377)
T ss_pred HHHHHHhcCC------CceEEEEECCCCCCCcHHH---HHHHHHHHHHcCCEEEEECCCccccc----cCcc--------
Confidence 2778888875 7999999999999998887 99999999999999999999975222 1111
Q ss_pred cCCCcEEEEecccccCCC-CCceEEEEeecCHHHHHHHHHhhcccC--CChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSL-PGFRTGVIYSYNESVLAAAKKLTRFCS--ISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~-~g~r~g~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
+.+.+++++|++|+++. ++...|+++. +++..+.++.....++ .++.....+...++. +..+.++..+
T Consensus 184 -~~gaDivv~S~tK~l~G~~d~~gG~v~~-~~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl~t-------l~~R~~~~~~ 254 (377)
T TIGR01324 184 -EHGVDISIQAGTKYLVGHSDIMIGTVVA-NARTWDQLREHSYLMGQMVDADDAYTTLRGLRT-------LGVRLKQHQE 254 (377)
T ss_pred -ccCceEEEecCceeccCCCCceEEEEEe-CHHHHHHHHHHHHHhCCCCCHHHHHHHHhhhhh-------HHHHHHHHHH
Confidence 15778999999999953 3577888887 7777676664333332 344333333333322 2344566677
Q ss_pred HHHHHHHHHHhCC-Cc-cc-----------------CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCC
Q 019899 238 LYDSFVAGLKQLG-IR-CS-----------------ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSA 298 (334)
Q Consensus 238 ~~~~~~~~l~~~g-~~-~~-----------------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~ 298 (334)
++..+.+.|+++. +. +. ...+| .+.+++... ..+....+.+. ++-.++.+.-|..
T Consensus 255 ~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~-~~s~~l~~~----~~~~~~~~~~~-l~~~~~~~slG~~ 328 (377)
T TIGR01324 255 SSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSG-LFSFVLQRL----TQKQVHAFLDH-LQLFGLGYSWGGY 328 (377)
T ss_pred HHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCc-eEEEEECCC----CHHHHHHHHHh-CCcceEeccCCCc
Confidence 7777888887752 21 11 11233 344566421 12334456666 5545555443332
Q ss_pred cCC-----------------CCCCeEEEEecCCCcccHHHHHHHHHHHHHH
Q 019899 299 CHC-----------------IEPGWFRCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 299 ~~~-----------------~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
... ..++-+|+|++ -|+.+++++.|.+++++
T Consensus 329 ~sl~~~~~~~~~~~~~~~~~~~~~liR~svG---lE~~~dl~~dl~~al~~ 376 (377)
T TIGR01324 329 ESLALCNQPELGHRPNIKRNLEGPLIRVHIG---LENVDDLKADLKAGFEA 376 (377)
T ss_pred cceeecCCCCCCHHHHHhccCCCCEEEEEeC---CCCHHHHHHHHHHHHhc
Confidence 111 01246999999 67888888988888764
No 213
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.91 E-value=8.8e-22 Score=175.27 Aligned_cols=206 Identities=13% Similarity=0.092 Sum_probs=151.4
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhh---hccCcEEEEEeCCCCCCccccH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIR---FRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~---~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
+++.++... ..+++++++|+++|+..++.+++++||+|++++|.|+++...+. ...|.++..++.. +.
T Consensus 66 Le~~iA~le--~~~~~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~-------~~ 136 (394)
T PRK09028 66 FQAAIVELE--GGAGTALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPM-------IG 136 (394)
T ss_pred HHHHHHHHh--CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCC-------CH
Confidence 444444332 34589999999999999999999999999999999988776432 1468888777631 45
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
+.+++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++++|++|+... ...++
T Consensus 137 e~l~~~l~~------~TklV~lespsNPtg~v~d---l~~I~~la~~~g~~lvvD~t~a~p~-------~~~Pl------ 194 (394)
T PRK09028 137 EGIRELIRP------NTKVLFLESPGSITMEVQD---VPTLSRIAHEHDIVVMLDNTWASPI-------NSRPF------ 194 (394)
T ss_pred HHHHHhcCc------CceEEEEECCCCCCCcHHH---HHHHHHHHHHcCCEEEEECCccccc-------cCCcc------
Confidence 778888865 7999999999999998877 9999999999999999999997411 11111
Q ss_pred CCCcEEEEecccccC-CCCCceEEEEeecCHHHHHHHHHhhccc--CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 162 DKDRVHIIYGLSKDL-SLPGFRTGVIYSYNESVLAAAKKLTRFC--SISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~-~~~g~r~g~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
+.+.+++++|.+|++ |.+++-.|+++. ++++.+.++...... ..++.....+..-++. +.-+.++..++
T Consensus 195 ~~GaDivv~S~tK~l~Gh~d~~~G~~~~-~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~T-------L~lR~~~~~~n 266 (394)
T PRK09028 195 EMGVDISIQAATKYIVGHSDVMLGTATA-NEKHWDQLREHSYLMGQCTSPDDVYLAMRGLRT-------LGVRLAQHEKN 266 (394)
T ss_pred ccCceEEEEeCCeEecCCCCEEEEEEEC-CHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCc-------HHHHHHHHHHH
Confidence 167889999999999 544577787765 777766666443332 3455544444444444 24455667788
Q ss_pred HHHHHHHHHhC
Q 019899 239 YDSFVAGLKQL 249 (334)
Q Consensus 239 ~~~~~~~l~~~ 249 (334)
+..+.+.|+++
T Consensus 267 a~~la~~L~~~ 277 (394)
T PRK09028 267 ALKVANWLATR 277 (394)
T ss_pred HHHHHHHHhcC
Confidence 88888888886
No 214
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.91 E-value=1.4e-21 Score=176.69 Aligned_cols=153 Identities=14% Similarity=0.215 Sum_probs=124.0
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhh----hhhccCcEEEEEeCCCCCCcccc
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRD----IRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
+.+.++...+ .++.++++++++|+..++.+++++||+|+++.+.|++.... ++ ..|.+++.++. .|
T Consensus 69 Le~~lA~leg--~~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~-~~Gv~v~~vd~-------~d 138 (431)
T PRK08248 69 FEKRIAALEG--GIGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLP-KLGITVKFVDP-------SD 138 (431)
T ss_pred HHHHHHHHhC--CCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHH-hCCEEEEEECC-------CC
Confidence 3444444333 56889999999999999999999999999999999875443 34 58999999985 37
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++ ++++|++++|+||||.+.| +++|+++|+++|+++|+|++|+. +....++ .
T Consensus 139 ~e~l~~ai~~------~tklV~l~sp~NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~----~~~~~pl----~--- 198 (431)
T PRK08248 139 PENFEAAITD------KTKALFAETIGNPKGDVLD---IEAVAAIAHEHGIPLIVDNTFAS----PYLLRPI----E--- 198 (431)
T ss_pred HHHHHHhcCC------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEeCCCCc----cccCChh----H---
Confidence 8999998876 7899999999999999999 88999999999999999999763 1111111 1
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeec
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSY 189 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~ 189 (334)
.+.++++.|++|.+|.+|.++|++++.
T Consensus 199 --~gaDivv~S~tK~lgg~g~~~Gg~v~~ 225 (431)
T PRK08248 199 --HGADIVVHSATKFIGGHGTSIGGVIVD 225 (431)
T ss_pred --cCCCEEEEcCccccCCCCCceEEEEEe
Confidence 677899999999999899999988773
No 215
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.91 E-value=8.9e-22 Score=176.30 Aligned_cols=286 Identities=15% Similarity=0.165 Sum_probs=178.7
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITAL 84 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l 84 (334)
+++.+++.++.+ +.+++++ ++.++..++..+.++||.|+++.-.|.+....++ ......+.++ ..|++++
T Consensus 61 ~e~~la~~~~~~-~~l~~~s-G~~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~-~~~~~~~~~~-------~~d~~~l 130 (370)
T PRK05937 61 LEHKIAHFHGAP-EAFIVPS-GYMANLGLCAHLSSVTDYVLWDEQVHISVVYSLS-VISGWHQSFR-------HNDLDHL 130 (370)
T ss_pred HHHHHHHHhCCC-eEEEECC-hHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHH-HcCCceEEec-------CCCHHHH
Confidence 444555555543 2355555 4456666666777788999998999999988887 4432333343 3689999
Q ss_pred HHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCC
Q 019899 85 DQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKD 164 (334)
Q Consensus 85 ~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (334)
++.++.....++++.+|++++++|++|.+.| +++|.++|+++|+++++|++|+...++.........+. . .+
T Consensus 131 ~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~----~-~~ 202 (370)
T PRK05937 131 ESLLESCRQRSFGRIFIFVCSVYSFKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLG----Y-EN 202 (370)
T ss_pred HHHHHhhhccCCCcEEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhC----C-CC
Confidence 9999864332234566778899999999999 99999999999999999999987544321110011111 0 22
Q ss_pred cEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc----ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 019899 165 RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR----FCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYD 240 (334)
Q Consensus 165 ~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (334)
.++.+.|+||.+|..| +.++. .+++.+.+..... ..+.+++...++..+++. +.+.....++++++.++
T Consensus 203 ~~~~~~tlsK~~g~~G---~~vl~-~~~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~---l~~~~~~~~~~l~~l~~ 275 (370)
T PRK05937 203 FYAVLVTYSKALGSMG---AALLS-SSEVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDF---LSQEGELARKQLFRLKE 275 (370)
T ss_pred CcEEEEechhhhhcCc---eEEEc-CHHHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHH---HHhCcHHHHHHHHHHHH
Confidence 2356789999998666 33444 4555555543211 123455555444444422 22222334566777777
Q ss_pred HHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccH
Q 019899 241 SFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDI 319 (334)
Q Consensus 241 ~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l 319 (334)
++.+.|...+. +....+.++.. ...++... +.++||.+... +.+ ..+++|++++. .|++|+
T Consensus 276 ~l~~~l~~~~~-------~~~~~i~~~~~-------~~~~~~~~-L~~~gi~v~~~--~~~-~~~~iRis~~~~~t~edi 337 (370)
T PRK05937 276 YFAQKFSSAAP-------GCVQPIFLPGI-------SEQELYSK-LVETGIRVGVV--CFP-TGPFLRVNLHAFNTEDEV 337 (370)
T ss_pred HHHHhcCCCCC-------CCEEEEEeCCh-------hHHHHHHH-HHHCCeeEEee--CCC-CCCEEEEEcCCCCCHHHH
Confidence 77777653211 11112333321 23456666 56689988632 222 24689999986 699999
Q ss_pred HHHHHHHHHHHHHc
Q 019899 320 PLVIERIQKVAETC 333 (334)
Q Consensus 320 ~~~l~~l~~~~~~~ 333 (334)
+++++.|++++++.
T Consensus 338 d~l~~~L~~~~~~~ 351 (370)
T PRK05937 338 DILVSVLATYLEKY 351 (370)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998764
No 216
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.90 E-value=8e-22 Score=176.85 Aligned_cols=293 Identities=14% Similarity=0.051 Sum_probs=193.3
Q ss_pred CCCCCCCCcEEEecCcHHHHHHHHHHhcCC-------------------------------CCeEEecCCCCCChhhhhh
Q 019899 11 QAVSFDPSQIVLTAGATPAVEILCFCLADH-------------------------------GNALLVPSPYYPGFDRDIR 59 (334)
Q Consensus 11 ~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~-------------------------------gd~vl~~~p~~~~~~~~~~ 59 (334)
+.|+++..+|-.-+|+. |+..++.++++| ||+|+-.++.++.+.....
T Consensus 106 ~lf~a~~anvqp~Sg~~-An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~ 184 (493)
T PRK13580 106 ELFGAEHAYVQPHSGAD-ANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGF 184 (493)
T ss_pred HHhCCCcccccCCCcHH-HHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCc
Confidence 33555666777666655 888888888865 7999988777665433211
Q ss_pred --hccC--cEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEE
Q 019899 60 --FRTG--VELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVIS 135 (334)
Q Consensus 60 --~~~g--~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~ 135 (334)
-..| .+++.+++++ ....+|++++++.+++ +++.++++..+|- |...| +++|.++|+++|+++++
T Consensus 185 ~~n~~~~~~~~~~y~vd~-~~g~iD~d~l~~~~~~------~~plvii~g~S~~-~~~~d---l~~i~eia~~~gA~L~V 253 (493)
T PRK13580 185 RPNISGKMFHQRSYGVDP-DTGLLDYDEIAALARE------FKPLILVAGYSAY-PRRVN---FAKLREIADEVGAVLMV 253 (493)
T ss_pred ccchhhheeeeEecccCc-ccCccCHHHHHHHHhh------cCCEEEEeCcccc-CCCcC---HHHHHHHHHHcCCEEEE
Confidence 0122 5666777753 3457999999999987 5566888877766 45778 99999999999999999
Q ss_pred eccccccccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc-cC-CChHHHHH
Q 019899 136 DEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF-CS-ISAPTQRL 213 (334)
Q Consensus 136 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~-~~-~~~~~~~~ 213 (334)
|++|+...+++.......... .+.+++++|++|++ .|.+.|++++ ++++.+.+.+.... ++ ..++...+
T Consensus 254 D~AH~~Gligg~~~~~~~~~~------~~~D~vtgT~hKaL--~GP~GG~I~~-~~~l~~~L~~a~P~i~gg~l~p~iAA 324 (493)
T PRK13580 254 DMAHFAGLVAGKVFTGDEDPV------PHADIVTTTTHKTL--RGPRGGLVLA-KKEYADAVDKGCPLVLGGPLPHVMAA 324 (493)
T ss_pred ECchhhceeccccchhhcCCC------CCCcEEEeCChhhc--cCCCeEEEEe-cHHHHHHHhhCCCcccCCCccHHHHH
Confidence 999988766533321110111 35668899999999 2334588888 78888888543322 22 22232222
Q ss_pred HHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccC-CCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeE
Q 019899 214 LISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSE-SSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKIN 292 (334)
Q Consensus 214 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~ 292 (334)
.+..+. +.......++++++.++.++|.+.|.+.|+++.. ...+..+++++.... .....+...|.+.||.
T Consensus 325 ~avAl~--e~~~~ef~~y~~~l~~Na~~La~~L~~~G~~vv~ggTdshIV~V~lg~~~------~~g~~a~~~L~e~GI~ 396 (493)
T PRK13580 325 KAVALA--EARTPEFQKYAQQVVDNARALAEGFLKRGARLVTGGTDNHLVLIDVTSFG------LTGRQAESALLDAGIV 396 (493)
T ss_pred HHHHHH--HHhCccHHHHHHHHHHHHHHHHHHHHhcCCCccCCCCCCCEEEEEeCCHH------HHHHHHHHHHHHCCeE
Confidence 222222 2111223567889999999999999999998763 234456667775431 1123444447779999
Q ss_pred EcCCCCcCC-CC---CCeEEEEecCC-----CcccHHHHHHHHHHHHHH
Q 019899 293 VTPGSACHC-IE---PGWFRCCFTSL-----THEDIPLVIERIQKVAET 332 (334)
Q Consensus 293 v~~g~~~~~-~~---~~~iRi~~~~~-----~~~~l~~~l~~l~~~~~~ 332 (334)
+.+-..... .+ +..|||++... +++|++++++.|.+++++
T Consensus 397 vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~ 445 (493)
T PRK13580 397 TNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSN 445 (493)
T ss_pred EccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHh
Confidence 875443221 12 56799997742 479999999999988764
No 217
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.90 E-value=9.7e-22 Score=176.23 Aligned_cols=293 Identities=14% Similarity=0.151 Sum_probs=186.4
Q ss_pred hhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHh-cCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHH
Q 019899 4 FMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCL-ADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSIT 82 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l-~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~ 82 (334)
.+++.+++.++. +++++++|+++|+.+++.++ +++||+|+++.++|.++...+. ..|.+++.++++. +++.+|++
T Consensus 37 ~le~~la~~~g~--~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~~~~~~~-~~G~~~v~vd~~~-~~~~~d~~ 112 (379)
T PRK11658 37 ALEQAFCQLTGN--QHAIAVSSATAGMHITLMALGIGPGDEVITPSLTWVSTLNMIV-LLGATPVMVDVDR-DTLMVTPE 112 (379)
T ss_pred HHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHHHHHHHH-HcCCEEEEEecCC-CcCCcCHH
Confidence 345555555544 46889999999999999999 7999999999999999988888 8999999999853 45678999
Q ss_pred HHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEecccccc-ccCCCCcchhhhhhhcccc
Q 019899 83 ALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGS-IFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 83 ~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~-~~~~~~~~~~~~~~~~~~~ 161 (334)
++++++++ ++++|+ |.|++|...+ +++|.++|+++|++||+|++|+.. .+.+.. . ..
T Consensus 113 ~l~~~i~~------~tkav~---~~~~~G~~~d---~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~---~---g~---- 170 (379)
T PRK11658 113 AIEAAITP------RTKAII---PVHYAGAPAD---LDAIRAIGERYGIPVIEDAAHAVGTYYKGRH---I---GA---- 170 (379)
T ss_pred HHHHhccc------CCeEEE---EeCCCCCcCC---HHHHHHHHHHcCCeEEEECCCccCCeECCee---c---CC----
Confidence 99999976 788776 5567999988 889999999999999999999752 232211 1 11
Q ss_pred CCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccC-CC--------------------hHHHHHHHHhhCC
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCS-IS--------------------APTQRLLISMLSD 220 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~-~~--------------------~~~~~~~~~~l~~ 220 (334)
.+.. +.||++...+++.+.|+++..++++.++++.....+. .+ ...+..+.+++..
T Consensus 171 -~g~~--~~Sf~~~K~l~~g~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~ 247 (379)
T PRK11658 171 -RGTA--IFSFHAIKNITCAEGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNLADINAAIAL 247 (379)
T ss_pred -CCCE--EEeCCCCCcCcccCceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeeccccccCcCHHHHHHHH
Confidence 2333 3455533333555788888877888887775432110 00 0001111122211
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc-ccCCC----ce-eEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEc
Q 019899 221 TKFIQEYLETNKRRIKKLYDSFVAGLKQLGIR-CSESS----AG-LYCWADMSGLIPSYSEKGELELWDKLLNIAKINVT 294 (334)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~-~~~~~----~g-~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~ 294 (334)
.+ .+.+++..++-++..+++.+.|++.++. +..+. .. ....+.++.... ..+..++... |+++||.+.
T Consensus 248 ~q--l~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~r~~~~~~-L~~~gI~~~ 321 (379)
T PRK11658 248 VQ--LAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDEERC---GISRDALMEA-LKERGIGTG 321 (379)
T ss_pred HH--HHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECCccc---cCCHHHHHHH-HHHCCCCCc
Confidence 11 2334555566666677777888776533 22221 12 222344442110 1245678888 566898765
Q ss_pred CCC----C---cC---CC---------CCCeEEEEecC-CCcccHHHHHHHHHHHHH
Q 019899 295 PGS----A---CH---CI---------EPGWFRCCFTS-LTHEDIPLVIERIQKVAE 331 (334)
Q Consensus 295 ~g~----~---~~---~~---------~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~ 331 (334)
+.. . |. .. ....+-+.+.. .+++++++.++.+++++.
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~~ 378 (379)
T PRK11658 322 LHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQQIAG 378 (379)
T ss_pred ccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHHh
Confidence 211 0 00 00 01234444443 689999999999998763
No 218
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.90 E-value=4.4e-21 Score=173.76 Aligned_cols=154 Identities=16% Similarity=0.230 Sum_probs=124.7
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhh----hhhccCcEEEEEeCCCCCCcccc
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRD----IRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
+.+.+++..+ .+..++++++++++..++.+++++||+|+++.+.|++.... +. ..|.+++.++. .|
T Consensus 62 le~~lA~l~g--~~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~-~~G~~v~~v~~-------~d 131 (418)
T TIGR01326 62 LEQRIAALEG--GVAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLK-RLGIEVRFVDP-------DD 131 (418)
T ss_pred HHHHHHHHhC--CCeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHH-HcCcEEEEECC-------CC
Confidence 4445554444 35789999999999999999999999999999999765443 34 57999998884 17
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++ ++++|++++|+||+|.+.| +++|.++|+++|+++|+|++|+.... ...+
T Consensus 132 ~~~l~~~l~~------~t~~V~le~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~~~~~-------~~~l----- 190 (418)
T TIGR01326 132 PEEFEKAIDE------NTKAVFAETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFATPYL-------CRPI----- 190 (418)
T ss_pred HHHHHHhcCc------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCchhhc-------CCch-----
Confidence 8999998876 7899999999999999999 89999999999999999999864211 1111
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecC
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYN 190 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~ 190 (334)
+.+.++++.|++|+++.+|.|+|++++++
T Consensus 191 -~~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 191 -DHGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred -hcCCeEEEECccccccCCccceEEEEEec
Confidence 14678999999999998999999999843
No 219
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.90 E-value=1.8e-21 Score=178.34 Aligned_cols=295 Identities=12% Similarity=0.090 Sum_probs=193.2
Q ss_pred hhhhcCCCCCCCCcEEEe---cCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhc---------cCcEEEEEeCCC
Q 019899 6 SQVLGQAVSFDPSQIVLT---AGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFR---------TGVELIPVHCRS 73 (334)
Q Consensus 6 ~~~~~~~~~~~~~~i~~~---~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~---------~g~~v~~v~~~~ 73 (334)
+++.++.++++++++.++ +++++++.+++.+++++||+|+++...|.++...+... .+.++..++++
T Consensus 86 r~~~a~lf~a~~~~~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~- 164 (452)
T PTZ00094 86 QKRALEAFGLDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVN- 164 (452)
T ss_pred HHHHHHHhCCCcccceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccC-
Confidence 345556677888887677 78999999999999999999999988888776554201 11334455553
Q ss_pred CCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhh
Q 019899 74 TDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMA 153 (334)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~ 153 (334)
.+..+|++++++++++. +++++++. ++.+|+..| +++|.++|+++|+++++|++|+....+....
T Consensus 165 -~~g~id~~~L~~~l~~~-----~~~lvi~~--~s~~g~~~d---i~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~---- 229 (452)
T PTZ00094 165 -EKGLIDYDKLEELAKAF-----RPKLIIAG--ASAYPRDID---YKRFREICDSVGAYLMADIAHTSGLVAAGVL---- 229 (452)
T ss_pred -CCCCcCHHHHHHHHHHh-----CCCEEEEe--CCCCCCccC---HHHHHHHHHHcCCEEEEeccchhccccCCCC----
Confidence 23689999999999763 56766553 345899999 8888899999999999999998755432211
Q ss_pred hhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh----hc-c--cCCChHHHHHHHHhhCChHHHHH
Q 019899 154 EILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL----TR-F--CSISAPTQRLLISMLSDTKFIQE 226 (334)
Q Consensus 154 ~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~----~~-~--~~~~~~~~~~~~~~l~~~~~~~~ 226 (334)
+... .+.+++++|++|+++.| +.|++++ ++++.+.+... .. . ++.+.....++..+++... ..
T Consensus 230 ~~~~-----~~~D~l~~S~hK~l~GP--~Gg~l~~-~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~--~~ 299 (452)
T PTZ00094 230 PSPF-----PYADVVTTTTHKSLRGP--RSGLIFY-RKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQ--SP 299 (452)
T ss_pred CCCC-----CCCcEEEcCCccCCCCC--CceEEEE-ecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHh--Ch
Confidence 1110 35668899999988323 3477777 44444333221 11 1 1334444444554443221 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc-eeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEc-CCCCcCC--C
Q 019899 227 YLETNKRRIKKLYDSFVAGLKQLGIRCSESSA-GLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVT-PGSACHC--I 302 (334)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~-~g~~~~~--~ 302 (334)
...+.++++.++.+++.+.|.+.|+++..+.. .....+.+.... .+..++... |+++||.+. ++..++. .
T Consensus 300 ~~~~~~~~i~~l~~~l~~~L~~~g~~v~~~~~~~~~~~v~~~~~~-----~~~~~~~~~-L~~~gI~vs~~~~p~~~~~~ 373 (452)
T PTZ00094 300 EWKEYAKQVLKNAKALAAALEKRGYDLVTGGTDNHLVLVDLRPFG-----ITGSKMEKL-LDAVNISVNKNTIPGDKSAL 373 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCCCceEeecCCcCC-----CCHHHHHHH-HHHCCcEEecccCCCCCcCC
Confidence 34567788999999999999888887764221 222334443221 123344555 677899984 4544432 1
Q ss_pred CCCeEEEEecCC-C----cccHHHHHHHHHHHHHH
Q 019899 303 EPGWFRCCFTSL-T----HEDIPLVIERIQKVAET 332 (334)
Q Consensus 303 ~~~~iRi~~~~~-~----~~~l~~~l~~l~~~~~~ 332 (334)
.++.+|++++.. + ++|++++++.|.++++.
T Consensus 374 ~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~~ 408 (452)
T PTZ00094 374 NPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVKL 408 (452)
T ss_pred CCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 357899998753 3 89999999999998863
No 220
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.90 E-value=1.2e-21 Score=174.72 Aligned_cols=283 Identities=17% Similarity=0.182 Sum_probs=188.9
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHh-cCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCL-ADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITA 83 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l-~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~ 83 (334)
+++.+++.++ .+++++++++++++..++.++ .++||+|+++.++|.++...+. ..|.+++.+++++ +.+.+|+++
T Consensus 23 ~~~~la~~~~--~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~d~~~ 98 (352)
T cd00616 23 FEKAFAEYLG--VKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAIL-LLGATPVFVDIDP-DTYNIDPEL 98 (352)
T ss_pred HHHHHHHHhC--CCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHH-HcCCeEEEEecCC-CcCCcCHHH
Confidence 3444444444 357888999999999999998 5899999999999999998888 8899999999853 367899999
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCC
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDK 163 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (334)
+++.+++ ++++|+++ |++|...+ +++|.++|+++|+++|+|++|+....... . .+. .
T Consensus 99 l~~~i~~------~~~~v~~~---~~~G~~~~---~~~i~~l~~~~~i~li~D~a~~~g~~~~~--~---~~~------~ 155 (352)
T cd00616 99 IEAAITP------RTKAIIPV---HLYGNPAD---MDAIMAIAKRHGLPVIEDAAQALGATYKG--R---KVG------T 155 (352)
T ss_pred HHHhcCc------CCeEEEEE---CCCCCcCC---HHHHHHHHHHcCCeEEEECCCCCCCeECC--E---Ecc------c
Confidence 9998865 78888876 47899888 88889999999999999999875321100 0 011 1
Q ss_pred CcEEEEeccc--ccCCCCCceEEEEeecCHHHHHHHHHhhcccC-------------CC-hHHHHHHHHhhCChHHHHHH
Q 019899 164 DRVHIIYGLS--KDLSLPGFRTGVIYSYNESVLAAAKKLTRFCS-------------IS-APTQRLLISMLSDTKFIQEY 227 (334)
Q Consensus 164 ~~~~~~~s~s--K~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~-------------~~-~~~~~~~~~~l~~~~~~~~~ 227 (334)
..++.+.|++ |+++ +...|+++.+++++.+.++....... .+ .+....++..+.. .+.
T Consensus 156 ~~d~~~~S~~~~K~~~--~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~----l~~ 229 (352)
T cd00616 156 FGDAGAFSFHPTKNLT--TGEGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQ----LEK 229 (352)
T ss_pred CcceeEEcCCCCCCCc--ccCceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHH----HHh
Confidence 1235566765 9884 33468888867788777765432110 00 1111111111111 123
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC-CCcccCCCc-----eeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCC
Q 019899 228 LETNKRRIKKLYDSFVAGLKQL-GIRCSESSA-----GLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHC 301 (334)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~-----g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~ 301 (334)
+.+..++.+++.+++.+.|.+. |+++..+.. ...+.+.++.. ...+..++.+. |+++||.+.. .|.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~v~~~-L~~~gI~~~~--~~~~ 302 (352)
T cd00616 230 LDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPE----AGESRDELIEA-LKEAGIETRV--HYPP 302 (352)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCc----CCCCHHHHHHH-HHHCCCCeee--ecCc
Confidence 3556677788889999999886 777654322 23344555431 01244677787 5567996642 1111
Q ss_pred C-----------------------CCCeEEEEecC-CCcccHHHHHHHHH
Q 019899 302 I-----------------------EPGWFRCCFTS-LTHEDIPLVIERIQ 327 (334)
Q Consensus 302 ~-----------------------~~~~iRi~~~~-~~~~~l~~~l~~l~ 327 (334)
. ..+.+|+++.. .+++|++.+++.|+
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 303 LHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred cccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 0 02579999986 69999999998874
No 221
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.90 E-value=3.2e-21 Score=174.29 Aligned_cols=154 Identities=19% Similarity=0.261 Sum_probs=121.4
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhh---ccCcEEEEEeCCCCCCccccH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRF---RTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~---~~g~~v~~v~~~~~~~~~~~~ 81 (334)
+.+.++...+ .+..++++++++|+..++.+++++||+|+++.+.|++....+.. ..|.++..++. .|+
T Consensus 63 Le~~lA~l~g--~~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~-------~d~ 133 (425)
T PRK06084 63 LEQRVAALEG--GVGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAH-------DDI 133 (425)
T ss_pred HHHHHHHHhC--CCceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECC-------CCH
Confidence 4444554433 45677889999999999999999999999999999976655541 24666666653 388
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
+++++++++ ++++|++++|+||+|.+.| +++|.++|+++|++||+|++|+.... . ..+ .
T Consensus 134 e~le~ai~~------~tklV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~----~---~p~-~---- 192 (425)
T PRK06084 134 AALEALIDE------RTKAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVL----C---RPF-E---- 192 (425)
T ss_pred HHHHHHhcc------CCcEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc----C---Chh-h----
Confidence 999999986 7899999999999999999 89999999999999999999974221 1 111 1
Q ss_pred CCCcEEEEecccccCCCCCceEEEEeec
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTGVIYSY 189 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g~i~~~ 189 (334)
.+.++++.|++|.++.+|.++|.+++.
T Consensus 193 -~gaDivv~S~tK~l~G~g~~~gG~v~~ 219 (425)
T PRK06084 193 -HGADIVVHSLTKYIGGHGTSIGGIVVD 219 (425)
T ss_pred -cCCCEEEECchhcccccccceeEEEEe
Confidence 466789999999998788888887763
No 222
>PLN00144 acetylornithine transaminase
Probab=99.90 E-value=1.4e-21 Score=175.05 Aligned_cols=275 Identities=14% Similarity=0.066 Sum_probs=182.9
Q ss_pred CCcEEEecCcHHHHHHHHHHhc---CC------------CCeEEecCCCCCChhhhhhhccCcE------------EEEE
Q 019899 17 PSQIVLTAGATPAVEILCFCLA---DH------------GNALLVPSPYYPGFDRDIRFRTGVE------------LIPV 69 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~---~~------------gd~vl~~~p~~~~~~~~~~~~~g~~------------v~~v 69 (334)
.+.+++++++++|+..++.... .. ..+|+....+|.+......-..+.. +..+
T Consensus 72 ~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~ 151 (382)
T PLN00144 72 ADRVFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFV 151 (382)
T ss_pred CCeEEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEe
Confidence 4689999999999999887542 10 2568888888877554332122211 1222
Q ss_pred eCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEEEEeccccccccCCCC
Q 019899 70 HCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHVISDEIYGGSIFGNEE 148 (334)
Q Consensus 70 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~ 148 (334)
|. .|++.+++.++. .++++|++...+||.|... +.+.++++.++|++||+++|+||+|.++...+..
T Consensus 152 ~~-------~d~~~l~~~~~~-----~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~ 219 (382)
T PLN00144 152 EY-------GNLEAARKLIQK-----GKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYL 219 (382)
T ss_pred CC-------CCHHHHHHhcCC-----CCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchH
Confidence 21 268888888753 2677666554488844432 3445999999999999999999999987665542
Q ss_pred cch-hhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHH--hhcccCCChHHHHHHHHhh---CChH
Q 019899 149 FVS-MAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKK--LTRFCSISAPTQRLLISML---SDTK 222 (334)
Q Consensus 149 ~~~-~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l---~~~~ 222 (334)
+.. ...+. ++ +.|+||.++ +|+|+|++++ ++++.+.+.. ....++.+++.+.++.+.+ .+.+
T Consensus 220 ~~~~~~~~~------PD----i~t~sK~l~-~G~pig~v~~-~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~ 287 (382)
T PLN00144 220 WAHEAYGVE------PD----IMTLAKPLA-GGLPIGAVLV-TEKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPG 287 (382)
T ss_pred hhhhhcCCC------CC----EEEeccccc-CCcceEEEEE-cHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhch
Confidence 221 22222 33 678999998 8999999999 7888887753 3445678888888888444 3322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC
Q 019899 223 FIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI 302 (334)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~ 302 (334)
+.++..++.+++ .+.+.+.+.+.+........|+++|+.+.. ....+... +.++||.+.|+..
T Consensus 288 -~~~~~~~~g~~l---~~~l~~~~~~~~~~~~vrg~G~~~~l~l~~--------~~~~~~~~-~~~~Gv~i~~~~~---- 350 (382)
T PLN00144 288 -FLASVAKKGEYL---RELLRRKLGGNPHVKEVRGVGLLVGIQLDV--------PAGPLVDA-CRDSGLLVLTAGK---- 350 (382)
T ss_pred -HHHHHHHHHHHH---HHHHHHHHhhCCCceeeecCceEEEEEecC--------ccHHHHHH-HHHCCeEEeecCC----
Confidence 233333333333 233334444443211111378999999832 12467777 4558999988631
Q ss_pred CCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 303 EPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 303 ~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
.+.+|++++. .+++++++++++|.+++.+.
T Consensus 351 -~~~lrl~p~~~~~~~~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 351 -GDVVRLVPPLVISEAELEQAVEILADCLPAL 381 (382)
T ss_pred -CCEEEEeCCCccCHHHHHHHHHHHHHHHHhc
Confidence 4789999986 68999999999999998764
No 223
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.90 E-value=6e-21 Score=171.39 Aligned_cols=280 Identities=17% Similarity=0.167 Sum_probs=182.5
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhh----hhhccCcEEEEEeCCCCCCcccc
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRD----IRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
+.+.++... ..+..+.++++++|+.+++.+++++||+|+++.++|.+.... +. ..|+++..++. .+|
T Consensus 66 lE~~la~le--g~~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~-~~Gi~v~~vd~------~~d 136 (432)
T PRK06702 66 FEQKLAELE--GGVGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLR-KLGIDVTFFNP------NLT 136 (432)
T ss_pred HHHHHHHHh--CCCcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHH-HCCCEEEEECC------CCC
Confidence 344444333 245689999999999999999999999999999999977775 45 68999988874 368
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
+++++++|++ ++++|++.+|+||++.+.| +++|+++|+++|+++++|++|.. +.+.....
T Consensus 137 ~~~l~~~I~~------~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~t--------P~~~~pl~--- 196 (432)
T PRK06702 137 ADEIVALAND------KTKLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLAT--------PYLCQAFE--- 196 (432)
T ss_pred HHHHHHhCCc------CCeEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCc--------hhhCChhh---
Confidence 8999999987 8999999999999999999 99999999999999999999742 11222222
Q ss_pred cCCCcEEEEecccccCC-----CCCceE-----EEEeecCHHHHH---------------------HHH--Hhhc-ccCC
Q 019899 161 VDKDRVHIIYGLSKDLS-----LPGFRT-----GVIYSYNESVLA---------------------AAK--KLTR-FCSI 206 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~-----~~g~r~-----g~i~~~~~~~~~---------------------~~~--~~~~-~~~~ 206 (334)
.+.+++++|+||.++ +.|.++ +|..+++.++.+ ..+ .... ....
T Consensus 197 --~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 274 (432)
T PRK06702 197 --HGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCM 274 (432)
T ss_pred --cCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccCCC
Confidence 677899999999664 444444 333322222221 111 1112 2345
Q ss_pred ChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-Cccc--C-----------------CCceeEEeeec
Q 019899 207 SAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLG-IRCS--E-----------------SSAGLYCWADM 266 (334)
Q Consensus 207 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~~~--~-----------------~~~g~~~~~~~ 266 (334)
++.....+...++.. ..+.++..+++..+.+.|+++. +..+ + .-+| .+.+++
T Consensus 275 sp~~a~l~~rgL~Tl-------~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~~~~~~~g~gg-~~sf~l 346 (432)
T PRK06702 275 SPFNAYISNIGLETL-------HLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQKYLKKGASG-VLTFGI 346 (432)
T ss_pred CHHHHHHHHhccCcH-------HHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCce-EEEEEe
Confidence 666666666666553 2333445678888888888762 2211 0 1123 344666
Q ss_pred CCcCCCCChhhHHHHHHHHHHhcCeEEcCCCC----------cCC-----------CCCCeEEEEecCCCcccHHHHHHH
Q 019899 267 SGLIPSYSEKGELELWDKLLNIAKINVTPGSA----------CHC-----------IEPGWFRCCFTSLTHEDIPLVIER 325 (334)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~----------~~~-----------~~~~~iRi~~~~~~~~~l~~~l~~ 325 (334)
.+. .+....+.+. ++-..+.+.-|.. .+. ..++.+|+|++ -|+.+.+++.
T Consensus 347 ~~~-----~~~~~~f~~~-l~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~liRlSvG---lEd~eDLi~D 417 (432)
T PRK06702 347 KGG-----LEAAKEFIAN-VKLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLSVG---IEDVSDIIAD 417 (432)
T ss_pred cCC-----HHHHHHHHHh-CccceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeEEEEec---cCCHHHHHHH
Confidence 421 1223344444 3322332222221 000 02357999999 7788889999
Q ss_pred HHHHHHH
Q 019899 326 IQKVAET 332 (334)
Q Consensus 326 l~~~~~~ 332 (334)
|.++++-
T Consensus 418 l~~Al~~ 424 (432)
T PRK06702 418 LEAALVG 424 (432)
T ss_pred HHHHHhc
Confidence 9988854
No 224
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.90 E-value=2e-21 Score=178.77 Aligned_cols=289 Identities=16% Similarity=0.120 Sum_probs=185.3
Q ss_pred CCCCCCcEEEecCcHHHHHHH--HH-HhcCCCC----eEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHH
Q 019899 13 VSFDPSQIVLTAGATPAVEIL--CF-CLADHGN----ALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALD 85 (334)
Q Consensus 13 ~~~~~~~i~~~~g~~~~~~~~--~~-~l~~~gd----~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~ 85 (334)
++++...+..++|+++.+..+ ++ .+.++|| +|+++.|.|+.+...+. ..|.+++.+++ +.++.+|+++++
T Consensus 126 ~G~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~-~~G~~vv~v~~--~~~~~~D~e~L~ 202 (481)
T PRK04366 126 TGMDAVTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAA-MAGFKVVEIPS--NEDGLVDLEALK 202 (481)
T ss_pred hCCCceEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHH-HcCCEEEEeec--CCCCCcCHHHHH
Confidence 344544455555555444432 22 3456666 99999999999999988 89999999998 345689999999
Q ss_pred HHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCc
Q 019899 86 QAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDR 165 (334)
Q Consensus 86 ~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (334)
+++++ ++++|++++|+ |||.+ .+++++|+++|+++|+++++|.++..... + ..... +.+.
T Consensus 203 ~~i~~------~t~~V~v~~Pn-~tG~~--~~dl~eI~~~a~~~gal~iVD~a~~~~~~-g-----~~~~~-----~~Ga 262 (481)
T PRK04366 203 AAVGE------DTAALMLTNPN-TLGLF--ERNILEIAEIVHEAGGLLYYDGANLNAIL-G-----KARPG-----DMGF 262 (481)
T ss_pred hhccc------CCeEEEEeCCC-Ccccc--chHHHHHHHHHHHcCCEEEEEecChhhhc-c-----cCCcc-----ccCC
Confidence 99976 78999999988 99965 34599999999999999999999753111 1 01111 1577
Q ss_pred EEEEecccccCCCC----CceEEEEeecCHHHHHHHHHh------hc---------------ccCCChHHHHHHHHhhCC
Q 019899 166 VHIIYGLSKDLSLP----GFRTGVIYSYNESVLAAAKKL------TR---------------FCSISAPTQRLLISMLSD 220 (334)
Q Consensus 166 ~~~~~s~sK~~~~~----g~r~g~i~~~~~~~~~~~~~~------~~---------------~~~~~~~~~~~~~~~l~~ 220 (334)
++++++.+|+++.| |..+|++.+ ++++.+.+... .. .++.+.....++..++..
T Consensus 263 D~~~~~~hK~l~~P~g~Ggp~~G~l~~-~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~ 341 (481)
T PRK04366 263 DVVHLNLHKTFSTPHGGGGPGSGPVGV-KEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRS 341 (481)
T ss_pred CEEEEechhhcCCCCCCCCCCeeeeee-hhhhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHH
Confidence 89999999998644 355788887 55555544200 00 011111222223333222
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcee-EEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCc
Q 019899 221 TKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGL-YCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSAC 299 (334)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~ 299 (334)
+..+.+.+..++...+.+++.+.|++. +++..+...+ -+.++++.... ...+..++.++|. ++||.+. +..+
T Consensus 342 --~G~~Gl~~~a~~~~~~a~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~v~~~L~-~~Gi~~~-~~~~ 414 (481)
T PRK04366 342 --LGAEGLREVSEDAVLNANYLKARLKDI-YDLPYDRPCMHEFVLSGKKLKE--TGVRTLDIAKRLL-DYGFHPP-TIYF 414 (481)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHhHhh-CcccCCCCeeEEEEEECccccc--cCCCHHHHHHHHH-HCCccCC-cccc
Confidence 123445566677788899999999886 3332221111 12334332100 0124567888854 5899865 2222
Q ss_pred CCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 300 HCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 300 ~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
....++.+|++++. .|++|++++++.|+++.++
T Consensus 415 p~~~~~~l~is~~e~~t~edid~l~~~l~~i~~~ 448 (481)
T PRK04366 415 PLIVPEALMIEPTETESKETLDAFIAAMKQIAEE 448 (481)
T ss_pred ccccCCeEEEcccCCCCHHHHHHHHHHHHHHHHH
Confidence 11225689999985 5899999999999998765
No 225
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.90 E-value=1.9e-20 Score=167.18 Aligned_cols=207 Identities=14% Similarity=0.181 Sum_probs=144.9
Q ss_pred hhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhh---hccCcEEEEEeCCCCCCcccc
Q 019899 4 FMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIR---FRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~---~~~g~~v~~v~~~~~~~~~~~ 80 (334)
-+++.++...+. +..+++++++.++..++ .++++||+|+++.|+|++....+. ...|.+++.++. .|
T Consensus 54 ~Le~~lA~l~g~--~~~~~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~-------~d 123 (377)
T PRK07671 54 ALEELIAVLEGG--HAGFAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDT-------SN 123 (377)
T ss_pred HHHHHHHHHhCC--CceEEeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECC-------CC
Confidence 344555554443 33455666677887765 577899999999999996554322 147899988874 37
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++ ++++|++++|+||+|.+.+ +++|.++|+++|+++++|++|+...+. .++ .
T Consensus 124 ~~~l~~ai~~------~tklV~le~P~NPtg~~~d---l~~I~~la~~~g~~lvvD~a~~~~~~~----~p~----~--- 183 (377)
T PRK07671 124 LEEVEEAIRP------NTKAIYVETPTNPLLKITD---IKKISTIAKEKGLLTIVDNTFMTPYWQ----SPI----S--- 183 (377)
T ss_pred HHHHHHhcCC------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCCccccC----Chh----h---
Confidence 8999999876 7899999999999999988 999999999999999999998753221 111 1
Q ss_pred cCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHHhhcccC--CChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKKLTRFCS--ISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
.+.++++.|++|+++.++ .-.|++++.++++.+.++..+...+ .++.....+..-++. +..+.++..+
T Consensus 184 --~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~~~~~a~l~~~~l~t-------l~~R~~~~~~ 254 (377)
T PRK07671 184 --LGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGILGPQDSWLLLRGLKT-------LGIRMEEHET 254 (377)
T ss_pred --hCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCCCHHHHHHHHcCcCh-------HHHHHHHHHH
Confidence 455789999999996443 3457777767788888876655532 333333322222222 3445566778
Q ss_pred HHHHHHHHHHhC
Q 019899 238 LYDSFVAGLKQL 249 (334)
Q Consensus 238 ~~~~~~~~l~~~ 249 (334)
++..+.+.|+++
T Consensus 255 na~~la~~L~~~ 266 (377)
T PRK07671 255 NSRAIAEFLNNH 266 (377)
T ss_pred HHHHHHHHHHcC
Confidence 888888888875
No 226
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.90 E-value=3.9e-21 Score=170.51 Aligned_cols=278 Identities=17% Similarity=0.168 Sum_probs=182.7
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcE-EEEEeCCCCCCccccHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVE-LIPVHCRSTDNFAFSITA 83 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~-v~~v~~~~~~~~~~~~~~ 83 (334)
+.+.++... ..+++++++|+++|+.+++. ++++||+|+++.+.|......+. ....+ -+.+. +..|+++
T Consensus 59 le~~lA~le--g~~~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~-~~~~~~~~~~~------~~~d~~~ 128 (364)
T PRK07269 59 LEETLAAIE--SADYALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFN-QQEKEGRFHFT------YANTEEE 128 (364)
T ss_pred HHHHHHHHh--CCCeEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHH-HHHhcCcEEEE------ecCCHHH
Confidence 444455443 46799999999999999984 56899999999999987665444 21111 11111 2357899
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCC
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDK 163 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (334)
+++++++ ++++|++++|+||+|.+.+ +++|+++|+++|+++++|++|....+ ..+ + + .
T Consensus 129 l~~~i~~------~TklV~lesP~NPtg~~~d---i~~I~~la~~~gi~vvvD~t~~~~~~----~~p---l-~-----~ 186 (364)
T PRK07269 129 LIAAIEE------DTDIVYIETPTNPLMVEFD---IEKVAKLAHAKGAKVIVDNTFYSPIY----QRP---I-E-----L 186 (364)
T ss_pred HHHhcCc------CceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCccccc----CCc---h-h-----h
Confidence 9999976 7999999999999999998 99999999999999999999753211 111 1 1 4
Q ss_pred CcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHHhhccc--CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 019899 164 DRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKKLTRFC--SISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYD 240 (334)
Q Consensus 164 ~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (334)
+.++++.|++|.++.+| .=.|+++++++++.++++...... ..++.....+..-++. +..+.++..+++.
T Consensus 187 gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~t-------L~~r~~~~~~na~ 259 (364)
T PRK07269 187 GADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFDSYLLMRGLKT-------LSLRMERSTANAQ 259 (364)
T ss_pred CCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCc-------HHHHHHHHHHHHH
Confidence 66789999999996444 235787876788888776544332 3455554544444444 2445556677778
Q ss_pred HHHHHHHhCC-C-ccc-CCCceeEEeeecCCcCCCCChhhHHHHHHH---------HHHhcCeEEcCCCCcCCC------
Q 019899 241 SFVAGLKQLG-I-RCS-ESSAGLYCWADMSGLIPSYSEKGELELWDK---------LLNIAKINVTPGSACHCI------ 302 (334)
Q Consensus 241 ~~~~~l~~~g-~-~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---------ll~~~gi~v~~g~~~~~~------ 302 (334)
.+.+.|+.+. + ++. ++.+|++. +.+.. ......+.+. |...+.+.+.|...++..
T Consensus 260 ~~a~~L~~~p~v~~v~ypg~gg~~s-f~~~~------~~~~~~f~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~r 332 (364)
T PRK07269 260 EVVAFLKKSPAVKEVLYTGKGGMIS-FKVAD------ETRIPHILNSLKVFTFAESLGGVESLITYPTTQTHADIPAEVR 332 (364)
T ss_pred HHHHHHHhCCCccEEeCCCcCcEEE-EEECC------HHHHHHHHHhCCcceEccCCCCcCeEeeCCcccccccCCHHHH
Confidence 8888888763 3 233 55566655 44421 0111222222 122223444454433221
Q ss_pred -----CCCeEEEEecCCCcccHHHHHHHHHHHHH
Q 019899 303 -----EPGWFRCCFTSLTHEDIPLVIERIQKVAE 331 (334)
Q Consensus 303 -----~~~~iRi~~~~~~~~~l~~~l~~l~~~~~ 331 (334)
.++-+|+|++ -|+.+.+++.|.++++
T Consensus 333 ~~~Gi~~~liRlsvG---lE~~~dli~dl~~al~ 363 (364)
T PRK07269 333 HSYGLTDDLLRLSIG---IEDARDLIADLKQALE 363 (364)
T ss_pred HhcCCCCCeEEEEec---cCCHHHHHHHHHHHhc
Confidence 2467999999 6788889999988874
No 227
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.90 E-value=4.1e-21 Score=172.14 Aligned_cols=275 Identities=17% Similarity=0.234 Sum_probs=179.1
Q ss_pred CCcEEEecCcHHHHHHHHHHh-cCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcC
Q 019899 17 PSQIVLTAGATPAVEILCFCL-ADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRG 95 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l-~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~ 95 (334)
.+++++++|+++|+.+++..+ +++||+|+++.|+|.++...+. ..|.+++.+++++ +++.+|++++++++++
T Consensus 46 ~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~~~~~-~~G~~~v~~d~d~-~~~~~d~~~le~~i~~----- 118 (375)
T PRK11706 46 SAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAFV-LRGAKIVFVDIRP-DTMNIDETLIEAAITP----- 118 (375)
T ss_pred CCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHH-HcCCEEEEEecCC-CcCCcCHHHHHHhcCC-----
Confidence 468999999999998887766 6899999999999999999988 8999999999863 4578999999999875
Q ss_pred CceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccc-cCCCCcchhhhhhhccccCCCcEEEEeccc-
Q 019899 96 VKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSI-FGNEEFVSMAEILEAEEVDKDRVHIIYGLS- 173 (334)
Q Consensus 96 ~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s- 173 (334)
++++|+++ |++|...+ +++|.++|+++|++||+|++|+.+. +.+..... . .++.+.||+
T Consensus 119 -~tk~i~~~---~~~G~~~~---~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~~g~-----------~-~~~~~~Sf~~ 179 (375)
T PRK11706 119 -KTRAIVPV---HYAGVACE---MDTIMALAKKHNLFVVEDAAQGVMSTYKGRALGT-----------I-GHIGCFSFHE 179 (375)
T ss_pred -CCeEEEEe---CCCCCccC---HHHHHHHHHHcCCEEEEECccccccccCCeeeec-----------C-cCEEEEeCCC
Confidence 78888876 46898888 8899999999999999999998765 33321111 1 123334554
Q ss_pred -ccCCCCCceEEEEeecCHHHHHHHHHhhcc-------------------cCCChHHHHHHHHhh-CChHHHHHHHHHHH
Q 019899 174 -KDLSLPGFRTGVIYSYNESVLAAAKKLTRF-------------------CSISAPTQRLLISML-SDTKFIQEYLETNK 232 (334)
Q Consensus 174 -K~~~~~g~r~g~i~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~ 232 (334)
|.++ +|.+.+++.. ++++.++++..+.. .+.+.......+++. ... +.+++..
T Consensus 180 ~K~l~-~g~gG~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql----~~l~~~~ 253 (375)
T PRK11706 180 TKNYT-AGEGGALLIN-DPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWAQL----EAADRIN 253 (375)
T ss_pred Ccccc-ccCCeEEEEC-CHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHHHHH----HHHHHHH
Confidence 9997 6777777765 88888877654422 112221111111111 111 1233444
Q ss_pred HHHHHHHHHHHHHHHhCC----Cccc-CCC----ceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCC----CCc
Q 019899 233 RRIKKLYDSFVAGLKQLG----IRCS-ESS----AGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPG----SAC 299 (334)
Q Consensus 233 ~~~~~~~~~~~~~l~~~g----~~~~-~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g----~~~ 299 (334)
++-+++.+++.+.|.... +... .+. ..+++++.++.. .+..++.+. ++++||.+.+. ...
T Consensus 254 ~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~r~~l~~~-L~~~gI~~~~~~~p~~~~ 326 (375)
T PRK11706 254 QRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRDL------EDRSALINF-LKEAGIMAVFHYIPLHSS 326 (375)
T ss_pred HHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECCc------CCHHHHHHH-HHHCCCCccccCCccCcc
Confidence 444455566666665542 3322 121 223455666542 134677777 55589986532 110
Q ss_pred ------CCC----------CCCeEEEEecC-CCcccHHHHHHHHHHHH
Q 019899 300 ------HCI----------EPGWFRCCFTS-LTHEDIPLVIERIQKVA 330 (334)
Q Consensus 300 ------~~~----------~~~~iRi~~~~-~~~~~l~~~l~~l~~~~ 330 (334)
+.. ..+.+-+-+.. .+++|++..++.+++++
T Consensus 327 ~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 327 PAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDTILEFF 374 (375)
T ss_pred hhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHHHHHHh
Confidence 000 01234444443 68999999999998865
No 228
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.89 E-value=1.3e-20 Score=167.60 Aligned_cols=271 Identities=12% Similarity=0.087 Sum_probs=174.9
Q ss_pred CcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhh----hhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 18 SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRD----IRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
+..++++++++|+..++.+++++||+|+++.|.|+++... ++ ..|.++..++.. +.+.+++++++
T Consensus 80 ~~~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~-~~Gi~v~~vd~~-------~~e~l~~al~~--- 148 (395)
T PRK05967 80 AGTILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLK-RLGVEVEYYDPE-------IGAGIAKLMRP--- 148 (395)
T ss_pred CCEEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHH-hcCeEEEEeCCC-------CHHHHHHhcCc---
Confidence 3456677789999999999999999999999999998753 34 679998888641 34778888876
Q ss_pred cCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEeccc
Q 019899 94 RGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLS 173 (334)
Q Consensus 94 ~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s 173 (334)
++++|++++|+||++.+.+ +++|+++|+++|+++++|++|... ....++ +.+.+++++|.+
T Consensus 149 ---~TklV~lesPsNP~l~v~d---l~~I~~la~~~g~~vvVD~t~a~p-------~~~~pl------~~GaDivv~S~t 209 (395)
T PRK05967 149 ---NTKVVHTEAPGSNTFEMQD---IPAIAEAAHRHGAIVMMDNTWATP-------LYFRPL------DFGVDISIHAAT 209 (395)
T ss_pred ---CceEEEEECCCCCCCcHHH---HHHHHHHHHHhCCEEEEECCccCc-------eecChh------HcCCCEEEEecc
Confidence 7999999999999876666 999999999999999999998641 112222 167789999999
Q ss_pred ccCC-CCCceEEEEeecCHHHHHHHHHhhccc--CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 019899 174 KDLS-LPGFRTGVIYSYNESVLAAAKKLTRFC--SISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLG 250 (334)
Q Consensus 174 K~~~-~~g~r~g~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 250 (334)
|.++ .++.-.|+++. +++..+.+....... ..++.. +..+++..+. +.-+.++..+++..+.+.|+++.
T Consensus 210 Ky~~Gh~d~~~G~v~~-~~~~~~~l~~~~~~~G~~~~p~d---a~l~~rgl~T----l~lR~~~~~~na~~lA~~L~~hp 281 (395)
T PRK05967 210 KYPSGHSDILLGTVSA-NEKCWPQLLEAHGTLGLCAGPDD---TYQILRGLRT----MGIRLEHHRKSALEIARWLEGRP 281 (395)
T ss_pred cccCCCCCeeEEEEEc-CHHHHHHHHHHHHHcCCCCCHHH---HHHHHcCccc----HHHHHHHHHHHHHHHHHHHHhCC
Confidence 9984 34566787765 777666665433332 233333 3333333221 23444566777777888887762
Q ss_pred -Cc---ccC---------------CCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCC----------
Q 019899 251 -IR---CSE---------------SSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHC---------- 301 (334)
Q Consensus 251 -~~---~~~---------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---------- 301 (334)
++ +.. .-+|+ +.+++..... ...+.+..+.+. ++-..+.+.-|.....
T Consensus 282 ~v~~V~yPgl~s~p~~~~~~~~~~g~gg~-~sf~l~~~~~-~~~~~~~~f~~~-l~l~~~~~slG~~~sLi~~~~~~~~~ 358 (395)
T PRK05967 282 DVARVLHPALPSFPGHEIWKRDFSGASGI-FSFVLAAGPE-KGKAKAHAFLDA-LEIFGLGYSWGGYESLALHVKLGDRT 358 (395)
T ss_pred CCcEEECCCCCCCccHHHHHHhCCCCceE-EEEEEcCCCc-ccHHHHHHHHHh-CCcceEccCCCCcceeeeeCCCChhH
Confidence 21 110 12343 4566642100 011222334444 3322222222221100
Q ss_pred -----CCCCeEEEEecCCCcccHHHHHHHHHHHHHH
Q 019899 302 -----IEPGWFRCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 302 -----~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
..++-+|+|++ .|+.+.+++.|.+++++
T Consensus 359 ~~~~~~~~~liRlSvG---lEd~~dLi~Dl~~Al~~ 391 (395)
T PRK05967 359 VAKAPYAGPVIRLQIG---LEDVPDLKADLERGFAA 391 (395)
T ss_pred hhhccCCCCeEEEEec---cCCHHHHHHHHHHHHHh
Confidence 01246999999 67788888888888865
No 229
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.89 E-value=8.9e-21 Score=171.16 Aligned_cols=275 Identities=14% Similarity=0.113 Sum_probs=184.4
Q ss_pred CCcEEEecCcHHHHHHHHHHhc--------CCCCeEEecCCCCCCh-hhhhhhccCc------------EEEEEeCCCCC
Q 019899 17 PSQIVLTAGATPAVEILCFCLA--------DHGNALLVPSPYYPGF-DRDIRFRTGV------------ELIPVHCRSTD 75 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~--------~~gd~vl~~~p~~~~~-~~~~~~~~g~------------~v~~v~~~~~~ 75 (334)
.+.+++++++++|+..++.... ...++|+..+.+|.+. ...+. ..+. .+..++
T Consensus 92 ~~~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----- 165 (397)
T TIGR03246 92 ADKVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVS-VGGQPKYSQGFAPLPGGIKHAP----- 165 (397)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHH-hcCCcccccCCCCCCCceEEeC-----
Confidence 4699999999999999988761 1235677776666654 33333 3332 122222
Q ss_pred CccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhh
Q 019899 76 NFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAE 154 (334)
Q Consensus 76 ~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~ 154 (334)
..|++.+++++++ ++++|++..++++.|... |.+.+++|.++|++||+++|+||+|.++...|..+. ...
T Consensus 166 --~~d~~~l~~~l~~------~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a-~~~ 236 (397)
T TIGR03246 166 --YNDLAAAKALISD------KTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYA-YMH 236 (397)
T ss_pred --CCCHHHHHHHhcc------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchh-hhh
Confidence 1378999998864 688777775566777654 789999999999999999999999987755443221 111
Q ss_pred hhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh--hcccCCChHHHHHHHHhhCChHHHHHHHHHHH
Q 019899 155 ILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL--TRFCSISAPTQRLLISMLSDTKFIQEYLETNK 232 (334)
Q Consensus 155 ~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 232 (334)
. +....+.+++|.++ .|+++|++++ ++++.+.+... ...++.+++.+.++.+.++..+ + .++.
T Consensus 237 ~--------gv~pDi~t~~K~lg-gG~pigav~~-~~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~---~--~~l~ 301 (397)
T TIGR03246 237 Y--------GVTPDILTSAKALG-GGFPIGAMLT-TTEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVN---T--PELL 301 (397)
T ss_pred c--------CCCCCEEEeehhhh-CCcceeEEEE-cHHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHh---h--ccHH
Confidence 1 11122347899998 8999999998 78888887643 2345678888777777765321 1 3456
Q ss_pred HHHHHHHHHHHHHHHhCCC--ccc--CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEE
Q 019899 233 RRIKKLYDSFVAGLKQLGI--RCS--ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFR 308 (334)
Q Consensus 233 ~~~~~~~~~~~~~l~~~g~--~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iR 308 (334)
++++++.+++.+.|++++. .+. ....|.++.+.+.... ......+...|++ +|+.+.+.. ++++|
T Consensus 302 ~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~----~~~~~~~~~~l~~-~Gv~~~~~g------~~~lR 370 (397)
T TIGR03246 302 AGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAVLTEAY----QGKAKQFVNAAAE-EGVIALIAG------PNVVR 370 (397)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEeeecCceEEEEEEcCch----hhHHHHHHHHHHH-CCeEEeecC------CCEEE
Confidence 7777888888888877532 211 1122444445553211 1234577777555 799987621 36899
Q ss_pred EEecC-CCcccHHHHHHHHHHHHHH
Q 019899 309 CCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 309 i~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
++++. .+++++++++++|.+++++
T Consensus 371 ~~p~~~~t~~~i~~~~~~l~~~l~~ 395 (397)
T TIGR03246 371 FAPSLVISDDDIDEGLARFERAIEQ 395 (397)
T ss_pred EeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 97664 6999999999999999875
No 230
>PRK05939 hypothetical protein; Provisional
Probab=99.89 E-value=1.2e-20 Score=169.30 Aligned_cols=153 Identities=18% Similarity=0.203 Sum_probs=121.7
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhh---hhhhccCcEEEEEeCCCCCCccccH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDR---DIRFRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~---~~~~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
+.+.+++..+ .+..++++++++|+..++.+++++||+|+++++.|+++.. .+. ..|.+++.++. .|+
T Consensus 52 lE~~la~leg--~~~~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~-~~G~~v~~v~~-------~d~ 121 (397)
T PRK05939 52 LEAKITKMEG--GVGTVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLR-GLGVEVTMVDA-------TDV 121 (397)
T ss_pred HHHHHHHHhC--CCeEEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHH-hcCCEEEEECC-------CCH
Confidence 3444444333 3456777777999999999999999999999999987543 444 67999999885 378
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
+++++++++ ++++|++++|+||+|.+.+ +++|.++|+++|+++++|++|+... .+.. .
T Consensus 122 e~l~~~l~~------~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~t~a~~~-------~~~~-~----- 179 (397)
T PRK05939 122 QNVAAAIRP------NTRMVFVETIANPGTQVAD---LAGIGALCRERGLLYVVDNTMTSPW-------LFRP-K----- 179 (397)
T ss_pred HHHHHhCCC------CCeEEEEECCCCCCCCHHh---HHHHHHHHHHcCCEEEEECCccccc-------ccCc-c-----
Confidence 999999876 8999999999999999977 9999999999999999999985311 1111 1
Q ss_pred CCCcEEEEecccccCCCCCceEEEEeec
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTGVIYSY 189 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g~i~~~ 189 (334)
+.+.+++++|+||.++.+|.++|++++.
T Consensus 180 ~~gaDivv~S~sK~~~g~g~~igg~v~~ 207 (397)
T PRK05939 180 DVGASLVINSLSKYIAGHGNALGGAVTD 207 (397)
T ss_pred ccCCEEEEecCeecccCCCCeEEEEEec
Confidence 1567899999999998889999998773
No 231
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.89 E-value=1.4e-21 Score=168.91 Aligned_cols=160 Identities=23% Similarity=0.326 Sum_probs=138.3
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc-CCCC----eEEecCCCCCChhhhhhh--ccCcEEEEEeCCCCCCc
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLA-DHGN----ALLVPSPYYPGFDRDIRF--RTGVELIPVHCRSTDNF 77 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~-~~gd----~vl~~~p~~~~~~~~~~~--~~g~~v~~v~~~~~~~~ 77 (334)
-|+.+++.+++++.+|++|+|+|++++++++... ..+| +|++.+-.|++....++. ..|.+++++|+. +++
T Consensus 90 aR~~VAklInAd~~dIiFts~ATEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~--~~~ 167 (428)
T KOG1549|consen 90 AREQVAKLINADPSDIVFTSGATESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVE--DSG 167 (428)
T ss_pred HHHHHHHHhCCCCCcEEEeCCchHHHHHHHHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccC--ccc
Confidence 4566778889999999999999999999999873 3455 899999999998887761 258999999995 666
Q ss_pred cccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhh
Q 019899 78 AFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILE 157 (334)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~ 157 (334)
.+|++.+++.|+. +++++.+.+.+|.+|+++| +++|..+|+++++.+++|.+++- |....+..++
T Consensus 168 ~~d~~~~~~~i~~------~T~lv~I~~Vnn~~gv~~P---v~EI~~icr~~~v~v~~DaAQav----G~i~vDV~el-- 232 (428)
T KOG1549|consen 168 LVDISKLREAIRS------KTRLVSIMHVNNEIGVLQP---VKEIVKICREEGVQVHVDAAQAV----GKIPVDVQEL-- 232 (428)
T ss_pred cccHHHHHHhcCC------CceEEEEEecccCcccccc---HHHHHHHhCcCCcEEEeehhhhc----CCccccHHHc--
Confidence 8999999999997 8999999999999999999 99999999999999999999986 5566677664
Q ss_pred ccccCCCcEEEEecccccCCCCCceEEEEeec
Q 019899 158 AEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSY 189 (334)
Q Consensus 158 ~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~ 189 (334)
+.+++..|.||++|.+| +|+++++
T Consensus 233 ------n~D~~s~s~HK~ygp~~--iGaLYvr 256 (428)
T KOG1549|consen 233 ------NADFLSISAHKIYGPPG--IGALYVR 256 (428)
T ss_pred ------CchheeeecccccCCCc--ceEEEEc
Confidence 55677889999999888 8999984
No 232
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.89 E-value=1.9e-22 Score=174.84 Aligned_cols=217 Identities=12% Similarity=0.099 Sum_probs=146.3
Q ss_pred hhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCC----ccccHHH
Q 019899 8 VLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDN----FAFSITA 83 (334)
Q Consensus 8 ~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~----~~~~~~~ 83 (334)
.+++.++.+ +.+++++|+++++.+++.+++++||+|+++.++|.+....+. ..|.++++++...+.+ ..+|+++
T Consensus 67 ~~A~~~ga~-~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~-~~g~~~~~v~~~~~~~~~~~~~i~~~~ 144 (294)
T cd00615 67 LAARAFGAK-HTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLV-LSGAVPVYLKPERNPYYGIAGGIPPET 144 (294)
T ss_pred HHHHHhCCC-CEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHH-HCCCEEEEecCccCcccCcCCCCCHHH
Confidence 344444432 345559999999999999999999999999999999999988 8899999988654333 3789999
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEecccccc-ccCCCCcchhhhhhhccccC
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGS-IFGNEEFVSMAEILEAEEVD 162 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~-~~~~~~~~~~~~~~~~~~~~ 162 (334)
+++++++. .+++++++++| |++|.++| +++|+++|+++|+++++|++|+.. .+.+...... . .
T Consensus 145 l~~~l~~~----~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~---~-----~ 208 (294)
T cd00615 145 FKKALIEH----PDAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSA---A-----M 208 (294)
T ss_pred HHHHHHhC----CCceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhccCcccCcch---h-----h
Confidence 99999752 36899999998 68999999 999999999999999999999753 2322111111 1 1
Q ss_pred CCcEEEEecccccCCCCCceEEEEe-ecCH-HHHHHHHHhhccc---CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 163 KDRVHIIYGLSKDLSLPGFRTGVIY-SYNE-SVLAAAKKLTRFC---SISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 163 ~~~~~~~~s~sK~~~~~g~r~g~i~-~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
.+.++++.|++|++ +|++.|+++ .+++ ...+++......+ +++.+...++..++. ++.....+..+++.+
T Consensus 209 ~~~div~~S~hK~l--~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ttsps~~~~asl~~a~~---~~~~~g~~~~~~~~~ 283 (294)
T cd00615 209 AGADIVVQSTHKTL--PALTQGSMIHVKGDLVNPDRVNEALNLHQSTSPSYLILASLDVARA---MMALEGKELVEELIE 283 (294)
T ss_pred cCCcEEEEchhccc--chHhHHHHHHhCCCcCCHHHHHHHHHHHCCCCcHHHHHHHHHHHHH---HHHHHhHHHHHHHHH
Confidence 57789999999987 666655543 3222 1123333222222 223233333333332 222223445556666
Q ss_pred HHHHHHHHHH
Q 019899 238 LYDSFVAGLK 247 (334)
Q Consensus 238 ~~~~~~~~l~ 247 (334)
+.+.+++.+.
T Consensus 284 ~~~~~r~~l~ 293 (294)
T cd00615 284 LALYARQEIN 293 (294)
T ss_pred HHHHHHHHHh
Confidence 6677776654
No 233
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.89 E-value=1.2e-20 Score=171.25 Aligned_cols=293 Identities=13% Similarity=0.040 Sum_probs=179.1
Q ss_pred CcEEEecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChhhhhhhccC-------------cEEEEEeCCCCCC------
Q 019899 18 SQIVLTAGATPAVEILCFCLA--DHGNALLVPSPYYPGFDRDIRFRTG-------------VELIPVHCRSTDN------ 76 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~~g-------------~~v~~v~~~~~~~------ 76 (334)
+.+++++++++|+..++.... ....+|+....+|.+......-..+ ..+..++.++...
T Consensus 95 ~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (420)
T TIGR00700 95 KKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDK 174 (420)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCcccccccccc
Confidence 689999999999998877542 2345688888888765432220111 1122333211000
Q ss_pred ---ccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHH-HHHHHHHHHhcCcEEEEeccccccccCCCCcchh
Q 019899 77 ---FAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRET-LYELLDFAREKNIHVISDEIYGGSIFGNEEFVSM 152 (334)
Q Consensus 77 ---~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~-l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~ 152 (334)
+.-+++.+++.+... ...+++.+|++...+..+|.+.+.++ +++|.++|++||+++|+||+|.++.+.+. +..+
T Consensus 175 ~~~~~~~~~~~~~~~~~~-~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~-~~a~ 252 (420)
T TIGR00700 175 QLSTDGELAAARAIFVID-VGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGA-MFAC 252 (420)
T ss_pred chhHHHHHHHHHHHHHhh-cCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccch-hHHH
Confidence 011245566555311 12246666666544778888776555 99999999999999999999998876553 1122
Q ss_pred hhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHH--hhcccCCChHHHHHHHHhhCChH--HHHHHH
Q 019899 153 AEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKK--LTRFCSISAPTQRLLISMLSDTK--FIQEYL 228 (334)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~ 228 (334)
.. .+....+.++||.++ +|+|+||+++ ++++.+.+.. ....++.+++.+.++.+.++..+ .+.++.
T Consensus 253 ~~--------~~~~pDi~~lsK~l~-~G~pig~v~~-~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~ 322 (420)
T TIGR00700 253 EH--------EGPEPDLITTAKSLA-DGLPLSGVTG-RAEIMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGLIERA 322 (420)
T ss_pred hh--------cCCCCCEEEeecccc-CCcceEEEEe-cHHHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHH
Confidence 11 122223456999999 9999999998 7888887753 34556788999888866664321 112222
Q ss_pred HHHHHHHHHHHHHHHHHHHhCC-CcccCCCceeEEeeecCCcCCC-CChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCe
Q 019899 229 ETNKRRIKKLYDSFVAGLKQLG-IRCSESSAGLYCWADMSGLIPS-YSEKGELELWDKLLNIAKINVTPGSACHCIEPGW 306 (334)
Q Consensus 229 ~~~~~~~~~~~~~~~~~l~~~g-~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~ 306 (334)
.++.+++++..+.+ ...++ +..+.+. |.++|+.+...... ........+... +.++||.+.|+..|+ ++
T Consensus 323 ~~~g~~l~~~L~~l---~~~~~~~~~vrg~-G~~~~i~~~~~~~~~~~~~~~~~l~~~-~~~~Gv~i~p~~~f~----~~ 393 (420)
T TIGR00700 323 RQIGRLVTDRLTTL---KAVDPRIGDVRGL-GAMIAVELVDPGTTEPDAGLAERIATA-AHAAGLLLLTCGMFG----NI 393 (420)
T ss_pred HHHHHHHHHHHHHH---HhhCCCEEEeecc-ceEEEEEEecCCCCCccHHHHHHHHHH-HHHCCeEEeccCCCC----CE
Confidence 23333322222222 22222 2223343 77778877432110 111223345555 356899999987663 68
Q ss_pred EEEEecC-CCcccHHHHHHHHHHHHH
Q 019899 307 FRCCFTS-LTHEDIPLVIERIQKVAE 331 (334)
Q Consensus 307 iRi~~~~-~~~~~l~~~l~~l~~~~~ 331 (334)
+|++++. .+++++++++++|.+++.
T Consensus 394 lRl~p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 394 IRFLPPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred EEEECCCCcCHHHHHHHHHHHHHHhh
Confidence 9999874 689999999999999875
No 234
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.89 E-value=1.9e-20 Score=169.43 Aligned_cols=292 Identities=12% Similarity=0.048 Sum_probs=183.8
Q ss_pred hhcCCCCCCCCcE-EEecCcHHHHHHHHHHhcCCCCeEEecCCCCCCh-hhhhhhc--cCcEE--EEEeCCCCCCccccH
Q 019899 8 VLGQAVSFDPSQI-VLTAGATPAVEILCFCLADHGNALLVPSPYYPGF-DRDIRFR--TGVEL--IPVHCRSTDNFAFSI 81 (334)
Q Consensus 8 ~~~~~~~~~~~~i-~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~-~~~~~~~--~g~~v--~~v~~~~~~~~~~~~ 81 (334)
++++.++ .+.. +.+++++.|+..++.+++++||+|+++..+|.+. ...+. . .+... ..++.+ ...+.+|+
T Consensus 82 ~la~l~g--~~~alv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~-~~~~~~d~ 157 (416)
T PRK13034 82 RAKQLFG--CDYANVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGAK-VSLSGKWYNAVQYGVD-RLTGLIDY 157 (416)
T ss_pred HHHHHhC--CCceEEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCCc-ceeccceeeeEEcccc-cccCCcCH
Confidence 4444444 3355 4467889999999999999999999999999873 32332 1 12222 234432 23457899
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
+++++.++.. ++++|++..+. +|+..| +.+|.++|+++|+++++|++|+...+.... ....+
T Consensus 158 ~~le~~l~~~-----~~klVi~~~~~--~g~~~d---l~~l~~la~~~g~~livD~Aha~G~~~~g~--~~~~~------ 219 (416)
T PRK13034 158 DEVEELAKEH-----KPKLIIAGFSA--YPRELD---FARFREIADEVGALLMVDMAHIAGLVAAGE--HPNPF------ 219 (416)
T ss_pred HHHHHHHhhc-----CCeEEEECCCc--cccccC---HHHHHHHHHHcCCEEEEeCcccccCcccCC--CCCCC------
Confidence 9999988653 57877766554 467777 888889999999999999999875543211 11111
Q ss_pred CCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhccc--C-CChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFC--S-ISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
...+++++|++|+++.+ ..|++++.++.+.+.++...... + ..++...++. +...+.+.....++++++.++
T Consensus 220 -~~~Di~~~s~~K~l~g~--~GG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~--~al~~~~~~~~~~~~~~l~~~ 294 (416)
T PRK13034 220 -PHAHVVTTTTHKTLRGP--RGGMILTNDEEIAKKINSAVFPGLQGGPLMHVIAAKA--VAFGEALQPEFKTYAKQVIAN 294 (416)
T ss_pred -CCceEEEEeCcccCCCC--CCeEEEECcHHHHHHHHhhcCCcccCCccHHHHHHHH--HHHHHHhChhHHHHHHHHHHH
Confidence 24568889999999323 24777775666666555432221 1 2222222222 111121112234567899999
Q ss_pred HHHHHHHHHhCCCcccCC-CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCc----CCCCCCeEEEEecC
Q 019899 239 YDSFVAGLKQLGIRCSES-SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSAC----HCIEPGWFRCCFTS 313 (334)
Q Consensus 239 ~~~~~~~l~~~g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~----~~~~~~~iRi~~~~ 313 (334)
.+++.+.|++.|+++..+ .......+.+..... ....+.+. |+++||.+.+.... .+..+..+|++++.
T Consensus 295 a~~l~~~L~~~G~~~~~~~~~t~i~~v~~~~~~~-----~~~~~~~~-L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~ 368 (416)
T PRK13034 295 AQALAEVLKERGYDLVSGGTDNHLLLVDLRPKGL-----SGKDAEQA-LERAGITVNKNTVPGDTESPFVTSGIRIGTPA 368 (416)
T ss_pred HHHHHHHHHHcCCEeccCCCCCcEEEEEcCCCCC-----CHHHHHHH-HHhCCcEEeccCCCCCCcCCCCCCeeEeCcHH
Confidence 999999999999987642 233445555543211 22334455 67789988642111 11124679999764
Q ss_pred -----CCcccHHHHHHHHHHHHHH
Q 019899 314 -----LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 314 -----~~~~~l~~~l~~l~~~~~~ 332 (334)
.+++|++++++.|.+++.+
T Consensus 369 ~t~~~~~~~di~~l~~~l~~~~~~ 392 (416)
T PRK13034 369 GTTRGFGEAEFREIANWILDVLDD 392 (416)
T ss_pred HHhCCCCHHHHHHHHHHHHHHHhc
Confidence 3589999999999988764
No 235
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.89 E-value=1.7e-20 Score=167.49 Aligned_cols=280 Identities=12% Similarity=0.149 Sum_probs=175.8
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhh---hccCcEEEEEeCCCCCCccccH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIR---FRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~---~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
+.+.++...+ .+..+++++++.|+.+++ .++++||+|++++|.|++....+. ...|.+++.++. .|+
T Consensus 55 Le~~la~l~g--~~~al~~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~-------~d~ 124 (380)
T PRK06176 55 LEELIADLEG--GVKGFAFASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDT-------SDL 124 (380)
T ss_pred HHHHHHHHhC--CCCEEEECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCC-------CCH
Confidence 4445554443 345566677788998766 567899999999999987654332 146888888774 378
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
+++++++++ ++++|++++|+||+|.+.| +++|.++|+++|+++|+|++|+...+. .++ .
T Consensus 125 e~l~~ai~~------~t~lV~lesP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~~~~----~p~----~---- 183 (380)
T PRK06176 125 SQIKKAIKP------NTKALYLETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFATPYYQ----NPL----L---- 183 (380)
T ss_pred HHHHHhcCc------CceEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEECCccccccC----Ccc----c----
Confidence 999998876 7999999999999999999 889999999999999999999753321 111 1
Q ss_pred CCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHHhhcccC--CChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 162 DKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKKLTRFCS--ISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
.+.++++.|++|.++.+| .-.|+++..++++.+.++..+...+ .++.....+..-++.. ..+.++..++
T Consensus 184 -~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~gl~tl-------~~R~~~~~~~ 255 (380)
T PRK06176 184 -LGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQRGIKTL-------GLRMEAHQKN 255 (380)
T ss_pred -cCCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccCcH-------HHHHHHHHHH
Confidence 466789999999996554 4467777756677777765544432 2333333333223221 2233334455
Q ss_pred HHHHHHHHHhC-CCc-cc----------------CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCc-
Q 019899 239 YDSFVAGLKQL-GIR-CS----------------ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSAC- 299 (334)
Q Consensus 239 ~~~~~~~l~~~-g~~-~~----------------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~- 299 (334)
+..+.+.|+++ .+. +. ....|-.+.+++... +....+++. ++-..+...-|...
T Consensus 256 a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~~------~~~~~f~~~-l~~~~~~~s~G~~~s 328 (380)
T PRK06176 256 ALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKND------SEAVAFVES-LKLFILGESLGGVES 328 (380)
T ss_pred HHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCH------HHHHHHHHc-CCcceEccCCCCCCc
Confidence 56666666654 111 00 011233455666421 122233333 22222222222211
Q ss_pred ---------CC-----------CCCCeEEEEecCCCcccHHHHHHHHHHHHHHc
Q 019899 300 ---------HC-----------IEPGWFRCCFTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 300 ---------~~-----------~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
+. ..++-+|+|++ .|+.+++++.|.+++++.
T Consensus 329 l~~~p~~~~~~~~~~~~~~~~gi~~~liR~svG---lE~~~dli~dl~~Al~~~ 379 (380)
T PRK06176 329 LVGIPAFMTHACIPKEQREAAGIRDGLVRLSVG---IEHEQDLLEDLEQAFAKI 379 (380)
T ss_pred eeeCCcccccccCCHHHHHhcCCCcCeEEEEec---cCCHHHHHHHHHHHHhhc
Confidence 00 01357999999 778889999999998764
No 236
>PLN02509 cystathionine beta-lyase
Probab=99.89 E-value=1.7e-20 Score=169.89 Aligned_cols=267 Identities=14% Similarity=0.162 Sum_probs=173.5
Q ss_pred CCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhh----hhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHH
Q 019899 17 PSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRD----IRFRTGVELIPVHCRSTDNFAFSITALDQAFNQAR 92 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~ 92 (334)
.+++++++++++++.+++ .++++||+|+++.|.|+++... +. ..|.+++.++. .|++++++++++
T Consensus 148 ~e~ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~-~~G~~v~~vd~-------~d~e~l~~ai~~-- 216 (464)
T PLN02509 148 ADRAFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVP-RSGVVVKRVNT-------TNLDEVAAAIGP-- 216 (464)
T ss_pred CCEEEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHH-HCCeEEEEeCC-------CCHHHHHHhCCc--
Confidence 567788888898886655 5789999999999999987643 33 57888888863 368889888865
Q ss_pred HcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEecc
Q 019899 93 KRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGL 172 (334)
Q Consensus 93 ~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 172 (334)
++++|++++|+||+|.+.+ +++|+++|+++|+++++|++|+..... .+ + . .+.+++++|+
T Consensus 217 ----~TklV~lesPsNPtG~i~D---l~~I~~lAk~~g~~lIVD~A~a~~~~~----~p---l-~-----~gaDivv~S~ 276 (464)
T PLN02509 217 ----QTKLVWLESPTNPRQQISD---IRKIAEMAHAQGALVLVDNSIMSPVLS----RP---L-E-----LGADIVMHSA 276 (464)
T ss_pred ----CCeEEEEECCCCCCCCHHH---HHHHHHHHHHcCCEEEEECCccccccC----Ch---h-h-----cCCcEEEecC
Confidence 7899999999999999876 999999999999999999998642221 11 1 1 4567889999
Q ss_pred cccCCCCC-ceEEEEeecCHHHHHHHHHhhccc--CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 019899 173 SKDLSLPG-FRTGVIYSYNESVLAAAKKLTRFC--SISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL 249 (334)
Q Consensus 173 sK~~~~~g-~r~g~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 249 (334)
+|+++.+| .-.|++++.++.+.+.++..+... ..++.. +...+...+ .+..+.++..++++.+.+.|+++
T Consensus 277 tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l~p~~---A~l~lr~L~----tL~~R~~r~~~nA~~la~~L~~~ 349 (464)
T PLN02509 277 TKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFD---CWLCLRGIK----TMALRIEKQQENARKIAMYLSSH 349 (464)
T ss_pred cccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCcCHHH---HHHHHhhhh----hHHHHHHHHHHHHHHHHHHHhcC
Confidence 99996433 346777765666656555433322 223333 333333222 23455667778888888888876
Q ss_pred -CCc---cc---------------CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcC----------
Q 019899 250 -GIR---CS---------------ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACH---------- 300 (334)
Q Consensus 250 -g~~---~~---------------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~---------- 300 (334)
.++ +. ..-+|++. +.+.. .+....+.+. ++-..+.+.-|....
T Consensus 350 p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~s-f~~~~------~~~~~~f~~~-l~l~~~a~slG~~~SLi~~p~~~sh 421 (464)
T PLN02509 350 PRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFS-FITGS------VALSKHLVET-TKYFSIAVSFGSVKSLISMPCFMSH 421 (464)
T ss_pred CCccEEECCCCCCCccHHHHHHhCCCCceEEE-EEeCC------HHHHHHHHHc-CCcceEcccCCCCCceeeCCccccc
Confidence 222 11 11244443 45521 1222334433 332222222222110
Q ss_pred C-----------CCCCeEEEEecCCCcccHHHHHHHHHHHHHH
Q 019899 301 C-----------IEPGWFRCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 301 ~-----------~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
. ..++-+|+|++ -|+.+++++.|.++++.
T Consensus 422 ~~~~~~~~~~~Gi~~~liRlSvG---lE~~~DLi~Dl~~Al~~ 461 (464)
T PLN02509 422 ASIPAEVREARGLTEDLVRISAG---IEDVDDLISDLDIAFRT 461 (464)
T ss_pred ccCCHHHHHhcCCCCCeEEEEec---cCCHHHHHHHHHHHHcc
Confidence 0 02357999999 67888899999988753
No 237
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.89 E-value=8.3e-21 Score=160.18 Aligned_cols=281 Identities=12% Similarity=0.091 Sum_probs=191.0
Q ss_pred CcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhh--hhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcC
Q 019899 18 SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRD--IRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRG 95 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~--~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~ 95 (334)
+.++++.++|+++++++.++++||+.|++..-+|-...+. +. ..+ .+.+++..+..+..+++++++..++....+.
T Consensus 51 ~a~~Fv~sGT~aN~lal~~~~~~~~~vi~~~~aHi~~~E~Ga~~-~~~-~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~ 128 (342)
T COG2008 51 EAALFVPSGTQANQLALAAHCQPGESVICHETAHIYTDECGAPE-FFG-GGQKLPIVPGADGKLTPEDVEAAIRPDDIHH 128 (342)
T ss_pred ceEEEecCccHHHHHHHHHhcCCCCeEEEeccccceecccCcHH-HHc-CCceeccCCCCCCCcCHHHHHHhhcCCCccc
Confidence 8899999999999999999999999999998888765543 22 222 2233344335667899999999988732244
Q ss_pred CceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccc--cccccCCCCcchhhhhhhccccCCCcEEEEeccc
Q 019899 96 VKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIY--GGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLS 173 (334)
Q Consensus 96 ~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s 173 (334)
.++.++++.+++|..|+++|.+++++|.++|+++|+++++|.+= .....-+ ++...+. ...+.+..++|
T Consensus 129 ~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg---~~~~~~~------~~~D~v~~~~t 199 (342)
T COG2008 129 APTPLAVLENTATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALG---VALKTIK------SYVDSVSFCLT 199 (342)
T ss_pred CCCceEEEeeccCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcC---CCHHHHH------hhCCEEEEecc
Confidence 55666777777778999999999999999999999999999871 1111112 2333332 45556667899
Q ss_pred ccCCCCCceEEEEeecCHHHHHHHHHhhcc----cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 019899 174 KDLSLPGFRTGVIYSYNESVLAAAKKLTRF----CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL 249 (334)
Q Consensus 174 K~~~~~g~r~g~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 249 (334)
|..+.+ +|.|+..+.++.+.++..+.. +..+.+...+...++++.-| ....++-.++++++.+.|+..
T Consensus 200 K~g~~~---~gAiv~gn~~~~~~a~~~rK~~Ggl~~k~r~laA~~~~~l~~~~~-----~~~~~Han~mA~~La~~~~~~ 271 (342)
T COG2008 200 KGGGAP---VGAIVFGNRDFAKRARRWRKRAGGLMRKARFLAAQGLYALEDDVW-----RLAADHANAMAARLAEGLEAK 271 (342)
T ss_pred cCCcce---eeeEEEcCHHHHHHHHHHHHHhcccHhhhhHHHHHHHHHHhccHH-----HHHHHHHHHHHHHHHHhhhhc
Confidence 988755 588887799999988765333 23344444555555554322 223334445688899999855
Q ss_pred -CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHH
Q 019899 250 -GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQ 327 (334)
Q Consensus 250 -g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~ 327 (334)
|+++..|.....+++++++... ........ +...|+.+.++. ..+|+.+++ ++++++++++..++
T Consensus 272 ~G~~~~~~~~tN~vf~~l~~~~i-----~~l~~~~~-~~~~~~~~~~~~-------~~vRfvts~a~~~edv~~~~~~~~ 338 (342)
T COG2008 272 PGVKLAFPVETNMVFVRLPESAI-----EALRLAGA-LFYRGVLIGAHG-------EIVRFVTSWATSEEDVDELVAAIK 338 (342)
T ss_pred CCceeccCCcccEEEEECChHHH-----HHHHhhch-hheeeeeccCCC-------ceEEEEeeccCCHHHHHHHHHHHH
Confidence 9998876556667788886311 11111122 222344433221 368999997 79999999999998
Q ss_pred HHH
Q 019899 328 KVA 330 (334)
Q Consensus 328 ~~~ 330 (334)
+++
T Consensus 339 ~~~ 341 (342)
T COG2008 339 ALL 341 (342)
T ss_pred Hhh
Confidence 765
No 238
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.88 E-value=2.5e-20 Score=168.85 Aligned_cols=278 Identities=16% Similarity=0.139 Sum_probs=187.0
Q ss_pred CCcEEEecCcHHHHHHHHHHhc----------CCCCeEEecCCCCCC-hhhhhhhccCc------------EEEEEeCCC
Q 019899 17 PSQIVLTAGATPAVEILCFCLA----------DHGNALLVPSPYYPG-FDRDIRFRTGV------------ELIPVHCRS 73 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~----------~~gd~vl~~~p~~~~-~~~~~~~~~g~------------~v~~v~~~~ 73 (334)
.+.+++++++++|+..++..+. ...++|+....+|.+ ....+. ..+. .+..++
T Consensus 94 ~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--- 169 (401)
T TIGR01885 94 YDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAIS-MSTDPDSRTNFGPYVPGFKKIP--- 169 (401)
T ss_pred CCEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHh-CcCCcccccccCCCCCCceEeC---
Confidence 4689999999999999988752 234678878888764 344444 3221 122333
Q ss_pred CCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHH-HHHHHHHHHHhcCcEEEEeccccccccCCCCcchh
Q 019899 74 TDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRE-TLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSM 152 (334)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~-~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~ 152 (334)
..|++++++++++. +.++.+|++..+++++|...+.+ .+++|.++|++||+++|+||+|.++.+.|..+ ..
T Consensus 170 ----~~d~~~le~~l~~~---~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~-~~ 241 (401)
T TIGR01885 170 ----YNNLEALEEALEDH---GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLL-CV 241 (401)
T ss_pred ----CCCHHHHHHHHHhc---CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhh-HH
Confidence 12689999888643 23677777776699999988655 69999999999999999999997765545322 11
Q ss_pred hhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHH--hhcccCCChHHHHHHHHhhCChHHHHHHHHH
Q 019899 153 AEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKK--LTRFCSISAPTQRLLISMLSDTKFIQEYLET 230 (334)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 230 (334)
.... ...+++ +++|.++..++|+|++++ ++++.+.++. ....++.+++.+.++.+.++..+ ++ .
T Consensus 242 -~~~~-----~~~di~--~~gK~l~~g~~~ig~v~~-~~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~--~~---~ 307 (401)
T TIGR01885 242 -DHEN-----VKPDIV--LLGKALSGGVYPVSAVLA-DDDVMLTIKPGEHGSTYGGNPLACAVAVAALEVLE--EE---K 307 (401)
T ss_pred -hhcC-----CCCCEE--EeeccccCCCCCcEEEEE-cHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHH--hc---c
Confidence 1111 111222 467999855589999998 7888887764 22345667888888777775432 11 2
Q ss_pred HHHHHHHHHHHHHHHHHhCCCccc---CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeE
Q 019899 231 NKRRIKKLYDSFVAGLKQLGIRCS---ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWF 307 (334)
Q Consensus 231 ~~~~~~~~~~~~~~~l~~~g~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~i 307 (334)
..++++++.+++.+.|++++..+. .+.+. +..+.++.... .....++...|. ++||.+.|+. ++.+
T Consensus 308 l~~~~~~~~~~~~~~L~~l~~~~~~~~~g~g~-~~~i~~~~~~~---~~~~~~l~~~l~-~~Gv~v~~~~------~~~l 376 (401)
T TIGR01885 308 LAENAEKLGEIFRDQLKKLPKPIITEVRGRGL-LNAIVIDESKT---GRTAWDLCLKLK-EKGLLAKPTH------GNII 376 (401)
T ss_pred HHHHHHHHHHHHHHHHHhccCCceeEEeecCe-eEEEEeccCcc---hhHHHHHHHHHH-hCCEEEEecC------CCEE
Confidence 345666778899999988754332 23333 33344433211 123467888855 5899997743 4689
Q ss_pred EEEecC-CCcccHHHHHHHHHHHHH
Q 019899 308 RCCFTS-LTHEDIPLVIERIQKVAE 331 (334)
Q Consensus 308 Ri~~~~-~~~~~l~~~l~~l~~~~~ 331 (334)
|++++. ++++++++++++|.++++
T Consensus 377 Ri~p~l~~t~~~i~~~l~~l~~~l~ 401 (401)
T TIGR01885 377 RLAPPLVITEEQLDEGLEIIKKVID 401 (401)
T ss_pred EEeCCccCCHHHHHHHHHHHHHHhC
Confidence 999864 699999999999998763
No 239
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.88 E-value=2.5e-20 Score=167.16 Aligned_cols=299 Identities=16% Similarity=0.196 Sum_probs=195.6
Q ss_pred hhcCCCCCCC-CcEEEecCcH-HHHHHHHHHhcC---CCCeEEecCCCCCChhhhhhhccCcEEEEEeC-CCCCCccccH
Q 019899 8 VLGQAVSFDP-SQIVLTAGAT-PAVEILCFCLAD---HGNALLVPSPYYPGFDRDIRFRTGVELIPVHC-RSTDNFAFSI 81 (334)
Q Consensus 8 ~~~~~~~~~~-~~i~~~~g~~-~~~~~~~~~l~~---~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~-~~~~~~~~~~ 81 (334)
.+.+.+++++ +..++++++| .++.+++.++-. +||.|+++..+|.+...++. ..|.+++.++. .+++.+.+|+
T Consensus 113 ~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~-~~G~~pv~Vd~~~d~~~~~iD~ 191 (444)
T TIGR03531 113 DFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAIS-TAGFEPRVIETVLDGDELTTDV 191 (444)
T ss_pred HHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHH-HcCCeEEEeeeeecCcCCCcCH
Confidence 3444455543 3689999999 577777777642 58999999999999999999 99999999995 3457789999
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCC-CCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPA-NPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~-nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++|++. +.+..++++.+|+ +++|...+ +++|.++|++||+++|+|++|+... .....+... +
T Consensus 192 e~Le~aIt~~---~~kai~~Vv~Tp~t~~~g~~dd---L~eIa~la~k~gI~lIvDaAyg~~~------~~~~~~~~~-g 258 (444)
T TIGR03531 192 EDIERAIEEI---GPDNILCVLSTTSCFAPRSPDD---IEEIAKICANYDIPHIVNNAYGLQS------NKYMELINK-A 258 (444)
T ss_pred HHHHHHHHhc---cCCCEEEEEEcCCcCCCcchhC---HHHHHHHHHHcCCEEEEECcCcCcC------hhhhhhhhc-c
Confidence 9999999852 1144556666664 34444444 9999999999999999999998521 111111100 1
Q ss_pred cCCCc-EEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHH
Q 019899 161 VDKDR-VHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLY 239 (334)
Q Consensus 161 ~~~~~-~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (334)
.+.++ ++++.|++|.+.++|. .|+++++++++.+.+.........+.+.+.+...++..+ .+.+.++.++..+++
T Consensus 259 ~~~Grad~vv~s~hK~l~~pg~-Gg~I~~~d~el~~~i~~~y~g~~~~s~~~~~~~~ll~~G---~~g~~~li~~~~~~a 334 (444)
T TIGR03531 259 IKVGRVDAVVSSTDKNFMVPVG-GAIIYSFDENFIQEISKSYPGRASASPSLDVLITLLSLG---SKGYLELLKERKEMY 334 (444)
T ss_pred ccccCCCeEEEeCccCCCCCCC-EEEEEECCHHHHHHHHHhccCCCCChHHHHHHHHHHHhC---HHHHHHHHHHHHHHH
Confidence 11222 5677899999987664 455556788998888764333334456676666666433 345577777777888
Q ss_pred HHHHHHHHhC----CCccc-CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCe----EEcCCC-------C---cC
Q 019899 240 DSFVAGLKQL----GIRCS-ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKI----NVTPGS-------A---CH 300 (334)
Q Consensus 240 ~~~~~~l~~~----g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi----~v~~g~-------~---~~ 300 (334)
+++.+.|++. |.++. .|.+...+.+.+.... ..+...+-..|.. ++| .|.||. . ||
T Consensus 335 ~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~----~~~~~~~g~~l~~-~~v~g~r~v~~~~~~~~~~~~~~~~~ 409 (444)
T TIGR03531 335 KYLKELLQKLAERHGERLLDTPENPISSAMTLSTLK----GKDPTMLGSMLYS-RRVTGPRVVTNGDSKTVGGCEFKGYG 409 (444)
T ss_pred HHHHHHHHHHHHhhCcEeecCCCCceeEEEeccccc----ccCHHHHHHHHHh-CCCCCceeecCCCceEECCEEeeccc
Confidence 8888888664 66655 3455555545554321 1233445555433 565 244555 1 22
Q ss_pred CCCC----CeEEEEec-CCCcccHHHHHHHHHHH
Q 019899 301 CIEP----GWFRCCFT-SLTHEDIPLVIERIQKV 329 (334)
Q Consensus 301 ~~~~----~~iRi~~~-~~~~~~l~~~l~~l~~~ 329 (334)
...+ .|+-++.+ .++.+|++.++++|.++
T Consensus 410 ~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 410 SHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred ccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence 2111 25555433 17899999999999875
No 240
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.88 E-value=9.3e-20 Score=165.26 Aligned_cols=290 Identities=15% Similarity=0.132 Sum_probs=185.9
Q ss_pred CcEEEecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChhhhhhhccC-------------cEEEEEeCCCCCCccc---
Q 019899 18 SQIVLTAGATPAVEILCFCLA--DHGNALLVPSPYYPGFDRDIRFRTG-------------VELIPVHCRSTDNFAF--- 79 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~~g-------------~~v~~v~~~~~~~~~~--- 79 (334)
+.+++++++++|+..++.... ....+|+....+|.+......-..| ..+..+|.+.+. ..+
T Consensus 102 ~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~-~~~~~~ 180 (421)
T PRK09792 102 AKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDL-HGISTQ 180 (421)
T ss_pred ceEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccc-ccccHH
Confidence 589999999999999887652 2345788888888765432210111 113334432211 112
Q ss_pred -cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhh
Q 019899 80 -SITALDQAFNQARKRGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILE 157 (334)
Q Consensus 80 -~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~ 157 (334)
+++.+++.+++.. ...++.+|++...++|+|... |.+.+++|.++|++||+++|+||++.++.+.|.. ..+..+..
T Consensus 181 ~~~~~l~~~~~~~~-~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~-~a~~~~~~ 258 (421)
T PRK09792 181 DSLDAIERLFKSDI-EAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKL-FAMDHYAD 258 (421)
T ss_pred HHHHHHHHHHHhcc-CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCch-hHHHhcCC
Confidence 3466776665310 123677666665589999866 8899999999999999999999999998776643 23332211
Q ss_pred ccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHH--hhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHH
Q 019899 158 AEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKK--LTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRI 235 (334)
Q Consensus 158 ~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 235 (334)
.++ +.+++|.++ +|+++||+++ ++++.+.+.. +...++.+++.+.++.+.++..+. .+.+. ++
T Consensus 259 ----~pD----i~t~gK~l~-~G~pigav~~-~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~-~~~~~----~~ 323 (421)
T PRK09792 259 ----KPD----LMTMAKSLA-GGMPLSGVVG-NANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDK-ESLCE----RA 323 (421)
T ss_pred ----CCc----EEEeehhhc-CCCceEEEEE-cHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHh-hhHHH----HH
Confidence 122 578999998 9999999998 8888877753 344567888888866666543221 11222 23
Q ss_pred HHHHHHHHHHHHh----CCCcccCCCc-eeEEeeecCCcCCC-CChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEE
Q 019899 236 KKLYDSFVAGLKQ----LGIRCSESSA-GLYCWADMSGLIPS-YSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRC 309 (334)
Q Consensus 236 ~~~~~~~~~~l~~----~g~~~~~~~~-g~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi 309 (334)
++..+++.+.|+. ++. +....+ |+++|++++..... ........+...+++ +||.+.+... ..+.+|+
T Consensus 324 ~~~g~~l~~~l~~l~~~~p~-v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~-~Gv~i~~~g~----~~~~irl 397 (421)
T PRK09792 324 NQLGQRLKNTLIDAKESVPA-IAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALA-QGLLLLTCGA----YGNVIRF 397 (421)
T ss_pred HHHHHHHHHHHHHHHHhCCC-cceecccceEEEEEecCCccCCcchHHHHHHHHHHHH-CCcEEeecCC----CCCEEEE
Confidence 3333333333333 333 234445 89999999753211 111234567777555 8999854211 2478999
Q ss_pred EecC-CCcccHHHHHHHHHHHHH
Q 019899 310 CFTS-LTHEDIPLVIERIQKVAE 331 (334)
Q Consensus 310 ~~~~-~~~~~l~~~l~~l~~~~~ 331 (334)
.++. +++++++++++++.++++
T Consensus 398 ~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 398 LYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred eCCCcCCHHHHHHHHHHHHHHHh
Confidence 9886 699999999999999875
No 241
>PRK02769 histidine decarboxylase; Provisional
Probab=99.88 E-value=4.1e-20 Score=164.37 Aligned_cols=281 Identities=11% Similarity=0.034 Sum_probs=194.0
Q ss_pred hcCCCCCCCCcE--EEecCcHHHHHHHHHHh--cCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHH
Q 019899 9 LGQAVSFDPSQI--VLTAGATPAVEILCFCL--ADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITAL 84 (334)
Q Consensus 9 ~~~~~~~~~~~i--~~~~g~~~~~~~~~~~l--~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l 84 (334)
+++.++++++++ ++|+|+|+++..++... ..++++|++++..|++....++ .+|.+.+.+++. .++.+|+++|
T Consensus 74 ~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~-~lg~~~~~V~~~--~~g~id~~~L 150 (380)
T PRK02769 74 FAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIAR-LLRIKSRVITSL--PNGEIDYDDL 150 (380)
T ss_pred HHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHH-HcCCCCceeccC--CCCcCcHHHH
Confidence 344455666665 88999999987776543 2467899999999999999998 889888888874 3557999999
Q ss_pred HHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcC---cEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 85 DQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKN---IHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 85 ~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~---~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
++++++. +.++.+|+++.++|++|.+.| +++|.++|+++| +++++|.+|+.+..+-..... .+ +.
T Consensus 151 ~~~i~~~---~~~t~lvv~t~gtt~tG~idp---i~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~--~~----d~ 218 (380)
T PRK02769 151 ISKIKEN---KNQPPIIFANIGTTMTGAIDN---IKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPP--PF----SF 218 (380)
T ss_pred HHHHHhC---CCCcEEEEEEeCCCCCcccCC---HHHHHHHHHHhCCCceEEEEEecccceeecccCccc--cC----Cc
Confidence 9999863 345889999999999999999 899999999998 699999999875432111000 01 11
Q ss_pred CCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc---------ccCCChHHHHHHHHhhCChHHHHHHHHHHH
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR---------FCSISAPTQRLLISMLSDTKFIQEYLETNK 232 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 232 (334)
..+.+.+..|.+|.++ ...++|+++.+ ++..+.+..... .++.+.....++...++... ...+.+..
T Consensus 219 ~~~vDsis~s~HK~~~-~P~g~G~l~~r-~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg--~~G~~~~~ 294 (380)
T PRK02769 219 ADGIDSIAISGHKFIG-SPMPCGIVLAK-KKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSLG--SKGLRQRV 294 (380)
T ss_pred cCCCCEEEECCcccCC-CCCCcEEEEEe-hhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHHHC--HHHHHHHH
Confidence 1345667789999886 44568999984 444444422111 11223334444444444322 34457788
Q ss_pred HHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEec
Q 019899 233 RRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFT 312 (334)
Q Consensus 233 ~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~ 312 (334)
++..+..+++.+.|++.|++....+....+.+..|. .++ . .|-.+.+. ..++|+++.
T Consensus 295 ~~~~~la~~l~~~L~~~g~~~~~~p~~~~v~f~~~~----------~~~----~--~~w~l~~~-------~~~~hi~~~ 351 (380)
T PRK02769 295 QHCLDMAQYAVDRLQANGIPAWRNPNSITVVFPCPS----------ERI----W--KKWHLATS-------GNQAHIITM 351 (380)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEcCCCceEEEEcCCC----------HHH----H--hCeeEccc-------CCEEEEEEC
Confidence 889999999999999888887654444444444332 122 1 34444322 247999988
Q ss_pred C-CCcccHHHHHHHHHHHHH
Q 019899 313 S-LTHEDIPLVIERIQKVAE 331 (334)
Q Consensus 313 ~-~~~~~l~~~l~~l~~~~~ 331 (334)
. .+.+.++.+++.|.+...
T Consensus 352 ~~~~~~~~~~f~~dl~~~~~ 371 (380)
T PRK02769 352 PHHNKQQIDSLIDELIFDLK 371 (380)
T ss_pred CCCCHHHHHHHHHHHHHHHh
Confidence 5 688899999999988765
No 242
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.87 E-value=1e-19 Score=166.49 Aligned_cols=294 Identities=11% Similarity=0.092 Sum_probs=175.3
Q ss_pred CcEEEecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChhhhhhhccC-------------cEEEEEeCCCCC--Ccccc
Q 019899 18 SQIVLTAGATPAVEILCFCLA--DHGNALLVPSPYYPGFDRDIRFRTG-------------VELIPVHCRSTD--NFAFS 80 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~~g-------------~~v~~v~~~~~~--~~~~~ 80 (334)
+.+++++++++|+..++.... ....+|+....+|.+......-..+ ..+..+|.++.. .....
T Consensus 116 ~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (451)
T PRK06918 116 KKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLT 195 (451)
T ss_pred CEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCc
Confidence 589999999999999987642 3345788888888765433220212 112333321110 01111
Q ss_pred --------HHHHHHHHHHHHHcCCceeEEEEeCC-CCCcccCCCHH-HHHHHHHHHHhcCcEEEEeccccccccCCCCcc
Q 019899 81 --------ITALDQAFNQARKRGVKVRGILICNP-ANPVGNIIPRE-TLYELLDFAREKNIHVISDEIYGGSIFGNEEFV 150 (334)
Q Consensus 81 --------~~~l~~~l~~~~~~~~~~~~i~~~~p-~nptG~~~~~~-~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~ 150 (334)
++.+++.+.+.. ..+++. .++..| +...|.+.+.+ .+++|.++|++||+++|+||+|.++.+.+.. .
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~-~~~~iA-avi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~-~ 272 (451)
T PRK06918 196 EEQYDDFMIEEFKNFFISEV-APETIA-AVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKY-F 272 (451)
T ss_pred hHHHHHHHHHHHHHHHHhhc-CCCceE-EEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCce-e
Confidence 123333332110 123455 455556 55567766554 5999999999999999999999998776642 2
Q ss_pred hhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh--hcccCCChHHHHHHHHhhCChH--HHHH
Q 019899 151 SMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL--TRFCSISAPTQRLLISMLSDTK--FIQE 226 (334)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~--~~~~ 226 (334)
.+..+.. .++ +.|+||.++ +|+|+||+++ ++++.+.+... ...++.+++.+.++.+.++..+ .+.+
T Consensus 273 a~~~~~v----~pD----i~t~sK~l~-~G~pig~v~~-~~~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~~~~~~ 342 (451)
T PRK06918 273 AIEHFDV----VPD----LITVSKSLG-AGVPISGVIG-RKEIMDESAPGELGGTYAGSPLGCAAALAVLDIIEKENLND 342 (451)
T ss_pred hhHhcCC----CCC----EEeeehhhc-CCCccEEEEE-cHHHHhccCCCCcCcCCCcCHHHHHHHHHHHHHHHHCCHHH
Confidence 3333221 122 458999998 9999999998 78888877532 3446788888888766664221 1122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCC-cccCCCceeEEeeecCCcCC-CCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCC
Q 019899 227 YLETNKRRIKKLYDSFVAGLKQLGI-RCSESSAGLYCWADMSGLIP-SYSEKGELELWDKLLNIAKINVTPGSACHCIEP 304 (334)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~l~~~g~-~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~ 304 (334)
+..++.+++.+..+.+. .++++ ..+.+.++++.|........ .........+... +.++||.+.|+..| .
T Consensus 343 ~~~~~g~~l~~~l~~l~---~~~~~~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~Gvlv~~~~~~----~ 414 (451)
T PRK06918 343 RAIELGKVVMNRFEEMK---NKYNCIGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKE-ANKRGLLLLSAGTY----G 414 (451)
T ss_pred HHHHHHHHHHHHHHHHH---hhCCCceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHH-HHHCCeEEeecCCC----C
Confidence 23333333322222222 12222 22345566666544321110 0111223445555 45589999987655 3
Q ss_pred CeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 305 GWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 305 ~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
+++|++++. ++++++++++++|.+++++
T Consensus 415 ~~lrl~p~l~~t~~~id~~l~~l~~~l~~ 443 (451)
T PRK06918 415 NVIRVLMPLVITDEQLEEGLTIIEESLQA 443 (451)
T ss_pred CEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 689999875 6899999999999999875
No 243
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.87 E-value=8.3e-20 Score=165.16 Aligned_cols=153 Identities=16% Similarity=0.181 Sum_probs=122.4
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhh---hccCcEEEEEeCCCCCCccccH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIR---FRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~---~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
+++.++...+. +..++++++++|+.+++.+++++||+|+++...|.+....+. ...|.+++.++.. |+
T Consensus 69 le~~lA~l~g~--~~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-------d~ 139 (433)
T PRK08134 69 LEERVAALEGG--VGAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPG-------DI 139 (433)
T ss_pred HHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCC-------CH
Confidence 44555544443 357999999999999999999999999999999987655442 1479999999852 78
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
++++++|++ ++++|++.+|+||+|.+.| +++|+++|+++|+++|+|.++..... ..++ .
T Consensus 140 ~~l~~~i~~------~TklV~~e~~~np~g~v~D---i~~I~~la~~~gi~livD~t~a~~~~----~~pl----~---- 198 (433)
T PRK08134 140 DGWRAAIRP------NTRLLFGETLGNPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTTPYL----LRPF----E---- 198 (433)
T ss_pred HHHHHhcCC------CCeEEEEECCCcccCcccC---HHHHHHHHHHcCCEEEEECCCccccc----CCch----h----
Confidence 999999986 8999999999999999999 99999999999999999999864211 1111 1
Q ss_pred CCCcEEEEecccccCCCCCceEEEEee
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTGVIYS 188 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g~i~~ 188 (334)
.+.++++.|.+|.++.+|..+|.+++
T Consensus 199 -~GaD~vv~S~tK~l~g~g~~~gG~v~ 224 (433)
T PRK08134 199 -HGADLVYHSATKFLGGHGTAIGGVLV 224 (433)
T ss_pred -cCCCEEEeccccccCCCCCceEEEEE
Confidence 57789999999999877866666654
No 244
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.87 E-value=9.5e-20 Score=163.95 Aligned_cols=295 Identities=15% Similarity=0.137 Sum_probs=188.6
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHh-cCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCL-ADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITA 83 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l-~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~ 83 (334)
+++.+++.++. ++.++++|+++|+..++.++ +++||+|+++.++|.++...+. ..|++++.+++++ +.+.+|+++
T Consensus 34 le~~la~~~g~--~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~~~~~~~-~~G~~~~~~~~~~-~~~~~d~~~ 109 (380)
T TIGR03588 34 FEEALAEYVGA--KYAVAFNSATSALHIACLALGVGPGDRVWTTPITFVATANCAL-YCGAKVDFVDIDP-DTGNIDEDA 109 (380)
T ss_pred HHHHHHHHHCC--CeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHH-HcCCEEEEEecCC-CcCCcCHHH
Confidence 44555555544 45677788999999999998 7899999999999999988888 8999999999854 346799999
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccc-cCCCCcchhhhhhhccccC
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSI-FGNEEFVSMAEILEAEEVD 162 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~-~~~~~~~~~~~~~~~~~~~ 162 (334)
+++++++. ...++++|+++ |++|...+ +++|.++|+++|++||+|++|+.+. +.+..... .
T Consensus 110 l~~~i~~~--~~~~t~~v~~~---~~~G~~~~---~~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~~g~----~------ 171 (380)
T TIGR03588 110 LEKKLAAA--KGKLPKAIVPV---DFAGKSVD---MQAIAALAKKHGLKIIEDASHALGAEYGGKPVGN----C------ 171 (380)
T ss_pred HHHHhhcc--cCCCceEEEEe---CCCCccCC---HHHHHHHHHHcCCEEEEECCCcccCccCCEeCCC----c------
Confidence 99999731 00167877765 56898888 8999999999999999999998642 32211111 0
Q ss_pred CCcEEEEeccc--ccCCCCCceEEEEeecCHHHHHHHHHhhcccCC-Ch---------------------HHHHHHHHhh
Q 019899 163 KDRVHIIYGLS--KDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSI-SA---------------------PTQRLLISML 218 (334)
Q Consensus 163 ~~~~~~~~s~s--K~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~-~~---------------------~~~~~~~~~l 218 (334)
...++.+.|++ |.++ .| ..|+++..++++.++++........ +. ..+..+.+++
T Consensus 172 ~~~d~~~~S~~~~K~~~-~~-~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~ 249 (380)
T TIGR03588 172 RYADATVFSFHPVKIIT-TA-EGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAAL 249 (380)
T ss_pred cccceEEEecCCCCccc-cc-CceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHH
Confidence 12256666765 8785 33 4677887788888877654321100 00 0001111111
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CcccCCC----ce-eEEeeecCCcCCCCChhhHHHHHHHHHHhcCeE
Q 019899 219 SDTKFIQEYLETNKRRIKKLYDSFVAGLKQLG-IRCSESS----AG-LYCWADMSGLIPSYSEKGELELWDKLLNIAKIN 292 (334)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~~~~~~----~g-~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~ 292 (334)
...+ .+.+.+..++-+++.+++.+.|.+.+ +....+. .. +...+.++.. . ..+..++... |+++||.
T Consensus 250 g~~q--L~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~---~~~r~~l~~~-L~~~gI~ 322 (380)
T TIGR03588 250 GLSQ--LKKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQE-F---GCTRKEVFEA-LRAAGIG 322 (380)
T ss_pred HHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECCc-C---CCCHHHHHHH-HHHCCCC
Confidence 1111 12245566666777788888887763 4433221 11 2222333321 1 1244677787 5668998
Q ss_pred EcCCCCc-----------CCC--------CCCeEEEEecC-CCcccHHHHHHHHHHHH
Q 019899 293 VTPGSAC-----------HCI--------EPGWFRCCFTS-LTHEDIPLVIERIQKVA 330 (334)
Q Consensus 293 v~~g~~~-----------~~~--------~~~~iRi~~~~-~~~~~l~~~l~~l~~~~ 330 (334)
+++.... ... ..+.+++.+.. .+++|++..++.|++++
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 323 VQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRKVL 380 (380)
T ss_pred cccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHHhC
Confidence 7633211 000 01457777775 69999999999998864
No 245
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.87 E-value=1.8e-19 Score=162.40 Aligned_cols=282 Identities=15% Similarity=0.102 Sum_probs=184.2
Q ss_pred CcEEEecCcHHHHHHHHHHhc------C---CCCeEEecCCCCCChhhhhhhccCcEEEE---EeCCCC--CCccccHHH
Q 019899 18 SQIVLTAGATPAVEILCFCLA------D---HGNALLVPSPYYPGFDRDIRFRTGVELIP---VHCRST--DNFAFSITA 83 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l~------~---~gd~vl~~~p~~~~~~~~~~~~~g~~v~~---v~~~~~--~~~~~~~~~ 83 (334)
+.+++++++++|+..++.... + ...+|+....+|.+......-..+..... -+..+. .-.-.|++.
T Consensus 99 ~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 178 (408)
T PRK04612 99 EKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEA 178 (408)
T ss_pred CEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHH
Confidence 689999999999999887542 1 13468888888877543322022211111 011000 000126788
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCcccCCC--HHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVGNIIP--RETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~--~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
++++++. +..+.++..|.+++|-+++ .+.+++|.++|++||+++|+||+|.++...|..+ ....
T Consensus 179 l~~~~~~------~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~----a~~~---- 244 (408)
T PRK04612 179 LEAAMAG------GDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLF----AHWQ---- 244 (408)
T ss_pred HHHhhCC------CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchh----hhhh----
Confidence 8887753 3445777778776666555 5689999999999999999999999876655321 1111
Q ss_pred CCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh--hcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHH
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL--TRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLY 239 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (334)
.+.+..+.+++|.++ +|+++|++++ ++++.+.+... ...++.+++.+.++.+.++..+ + ..+.++++++.
T Consensus 245 -~~~~pdi~t~~K~l~-~G~piga~~~-~~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~---~--~~l~~~~~~~g 316 (408)
T PRK04612 245 -EQVTPDIVTLAKALG-GGFPIGAMLA-GPKVAETMQFGAHGTTFGGNPLAAAVARVALRKLA---S--PQIAANVARQS 316 (408)
T ss_pred -cCCCCCEEEEcchhc-CCCceEEEEE-CHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHH---h--ccHHHHHHHHH
Confidence 355567789999998 8999999998 67777776542 3346678888888888875432 1 24455666666
Q ss_pred HHHHHHHHhC----CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-C
Q 019899 240 DSFVAGLKQL----GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS-L 314 (334)
Q Consensus 240 ~~~~~~l~~~----g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~ 314 (334)
+++.+.|+++ ++......-|.++.+.+.+... ....++... +.++||.+.|.. .+.+|+..+. +
T Consensus 317 ~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~~----~~a~~i~~~-l~~~Gvlv~~~g------~~~lRl~Ppl~i 385 (408)
T PRK04612 317 AALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPAHA----GQAGAILDL-AAEHGLLLLQAG------PDVLRFVPALNL 385 (408)
T ss_pred HHHHHHHHHHHhhCCCeeeeeccceEEEEEecCchh----hHHHHHHHH-HHHCCeEEeeCC------CCEEEEcCCccC
Confidence 7777776654 2211122235556566642111 123456666 555899997632 3679998774 6
Q ss_pred CcccHHHHHHHHHHHHHH
Q 019899 315 THEDIPLVIERIQKVAET 332 (334)
Q Consensus 315 ~~~~l~~~l~~l~~~~~~ 332 (334)
+++|++++++++.+++++
T Consensus 386 t~eeid~~l~~l~~~l~~ 403 (408)
T PRK04612 386 TDAELADGLARLRLALAD 403 (408)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 999999999999998865
No 246
>PLN02624 ornithine-delta-aminotransferase
Probab=99.87 E-value=1.1e-19 Score=166.80 Aligned_cols=281 Identities=15% Similarity=0.144 Sum_probs=180.0
Q ss_pred CCcEEEecCcHHHHHHHHHHhcC---------CC-CeEEecCCCCCChhhhhhhccCc------------EEEEEeCCCC
Q 019899 17 PSQIVLTAGATPAVEILCFCLAD---------HG-NALLVPSPYYPGFDRDIRFRTGV------------ELIPVHCRST 74 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~~---------~g-d~vl~~~p~~~~~~~~~~~~~g~------------~v~~v~~~~~ 74 (334)
.+.+++++++++|+..++..... ++ .+|+....+|.+......-..+- .+..++.
T Consensus 132 ~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~--- 208 (474)
T PLN02624 132 YDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF--- 208 (474)
T ss_pred CCeEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC---
Confidence 46899999999999999864421 12 25676677776653222102111 1222221
Q ss_pred CCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHH-HHHHHHHHHhcCcEEEEeccccccccCCCCcchhh
Q 019899 75 DNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRET-LYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMA 153 (334)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~-l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~ 153 (334)
.|++.+++.++. ++.++.+|++..++|++|.+++.++ +++|.++|++||+++|+||+|.++.+.|..+..
T Consensus 209 ----~d~~~l~~~l~~---~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~-- 279 (474)
T PLN02624 209 ----GDLDALEKIFEE---DGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLAC-- 279 (474)
T ss_pred ----CCHHHHHHHHHh---CCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhH--
Confidence 267888888864 2346888888888999999998775 999999999999999999999876555532211
Q ss_pred hhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh--cccCCChHHHHHHHHhhCChHHHHHHHHHH
Q 019899 154 EILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT--RFCSISAPTQRLLISMLSDTKFIQEYLETN 231 (334)
Q Consensus 154 ~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 231 (334)
... +. .. .+.+++|.+|..++++|+++. ++++.+.+.... ..++.+++.+.++.+.++..+ + ...
T Consensus 280 ~~~---~i-~p---Div~lsK~lggG~~pigav~~-~~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~--~---~~l 346 (474)
T PLN02624 280 DWE---EV-RP---DVVILGKALGGGVIPVSAVLA-DKDVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQ--D---EKL 346 (474)
T ss_pred Hhc---CC-CC---CEEEecccccCCCCcceeeee-cHHHHhHhccCCcCCCCCCCHHHHHHHHHHHHHHH--h---chH
Confidence 111 11 11 133478999855689999998 777777765332 345678888888777775322 1 122
Q ss_pred HHHHHHHHHHHHHHHHhCC------CcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCC
Q 019899 232 KRRIKKLYDSFVAGLKQLG------IRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPG 305 (334)
Q Consensus 232 ~~~~~~~~~~~~~~l~~~g------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~ 305 (334)
.++..++.+++.+.|+++. +....+. |.+..+.+..... ....+.++... +.++||.+.|+. ++
T Consensus 347 ~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~-G~~~~i~l~~~~~--~~~~a~~~~~~-L~e~GV~v~p~~------~~ 416 (474)
T PLN02624 347 AERSAKLGQELRDQLQKIQKQFPKLIKEVRGR-GLLNAVVLNSPKL--GPVSAYDVCLK-LKERGLLAKPTH------DT 416 (474)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceEEEEee-EEEEEEEecCCCc--ChHHHHHHHHH-HHhCCeEEecCC------CC
Confidence 3344444555555554431 2222333 4444445532210 01234577777 456899998753 47
Q ss_pred eEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 306 WFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 306 ~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
++||+++. .+++++++++++|.+++++
T Consensus 417 ~lR~~p~l~~t~e~id~~l~~L~~~l~~ 444 (474)
T PLN02624 417 IIRLAPPLSISEDELQECSKALSDVLEH 444 (474)
T ss_pred EEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 89999763 6999999999999998865
No 247
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.87 E-value=4.8e-19 Score=161.12 Aligned_cols=292 Identities=14% Similarity=0.117 Sum_probs=181.5
Q ss_pred CCCcEEEecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChhhh-hhhccC------------cEEEEEeCCCCCC--cc
Q 019899 16 DPSQIVLTAGATPAVEILCFCLA--DHGNALLVPSPYYPGFDRD-IRFRTG------------VELIPVHCRSTDN--FA 78 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~~~-~~~~~g------------~~v~~v~~~~~~~--~~ 78 (334)
..+.+++++++++|+..++.... ....+|+....+|.+.... +. ..| ..+..+|.++... +.
T Consensus 100 ~~~~v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (443)
T PRK08360 100 DNPKVSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMS-LTGLDFPVRALVGELSDVHYIPYPDCYRCPFG 178 (443)
T ss_pred CCCEEEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHH-hcCCCcccccCCCCCCCcEEEeCCcccccccc
Confidence 33689999999999999987642 3445787777777664322 22 112 1233343321100 00
Q ss_pred --------ccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCC-HHHHHHHHHHHHhcCcEEEEeccccccccCCCCc
Q 019899 79 --------FSITALDQAFNQARKRGVKVRGILICNPANPVGNIIP-RETLYELLDFAREKNIHVISDEIYGGSIFGNEEF 149 (334)
Q Consensus 79 --------~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~-~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~ 149 (334)
.+++.+++.++.. ..+.++.+|++...+||+|.+++ .+.++++.++|++||+++|+||+|.++.+.|..+
T Consensus 179 ~~~~~~~~~~~~~~~~~l~~~-~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~ 257 (443)
T PRK08360 179 KEPGSCKMECVEYIKEKFEGE-VYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWF 257 (443)
T ss_pred CchhhhHHHHHHHHHHHHHhc-cCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccch
Confidence 1234455555431 11246887777644799999887 4479999999999999999999999876655422
Q ss_pred c-hhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh--hcccCCChHHHHHHHHhhCChHHHHH
Q 019899 150 V-SMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL--TRFCSISAPTQRLLISMLSDTKFIQE 226 (334)
Q Consensus 150 ~-~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~ 226 (334)
. ....+ .++ +.++||.++ +|+|+||+++ ++++.+.+... ...++.++..+.++.+.++..+ +
T Consensus 258 a~~~~~~------~pD----iitlsK~l~-~G~pigav~~-~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~--~- 322 (443)
T PRK08360 258 AIEHFGV------EPD----IITLGKPLG-GGLPISATIG-RAEIMDSLPPLAHAFTLSGNPVASAAALAVIEEIE--E- 322 (443)
T ss_pred hhhhcCC------CCC----EEEeccccc-CCceeEEEEE-cHHHHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHH--H-
Confidence 1 11111 122 236799999 9999999998 78888888643 3345677888888777775432 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC----CCcccCCCceeEEeeecCCcCCC--CChhhHHHHHHHHHHhcCeEEcCCCCcC
Q 019899 227 YLETNKRRIKKLYDSFVAGLKQL----GIRCSESSAGLYCWADMSGLIPS--YSEKGELELWDKLLNIAKINVTPGSACH 300 (334)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~l~~~----g~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~gi~v~~g~~~~ 300 (334)
....++++++-+++.+.|++. ++......-|.++.+++...... ........+...+ .++||.+.+..
T Consensus 323 --~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~~~~~~--- 396 (443)
T PRK08360 323 --KNLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGVDLVKDRETKERAYEEAAKVVWRA-WELGLIVTFFS--- 396 (443)
T ss_pred --cCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEecCCcccCccHHHHHHHHHHH-HHCCeEEeecC---
Confidence 123445555556666666543 22111122355555665322110 0112234566664 45899886422
Q ss_pred CCCCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 301 CIEPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 301 ~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
.+.+|++.+. +++++++++++++.+++++.
T Consensus 397 ---~~~lr~~P~l~~t~~~id~~~~~l~~~l~~~ 427 (443)
T PRK08360 397 ---GNVLRIQPPLTIEKEVLDEGLDILEEAIEDV 427 (443)
T ss_pred ---CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3679998774 69999999999999998753
No 248
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.87 E-value=2.2e-19 Score=162.77 Aligned_cols=292 Identities=13% Similarity=0.100 Sum_probs=186.7
Q ss_pred CCcEEEecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChhhhhhhccCc-------------EEEEEeCCCCCC---cc
Q 019899 17 PSQIVLTAGATPAVEILCFCLA--DHGNALLVPSPYYPGFDRDIRFRTGV-------------ELIPVHCRSTDN---FA 78 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~~g~-------------~v~~v~~~~~~~---~~ 78 (334)
.+.+++++++++|+..++.... ....+|+....+|.+......-..+. .+..++.++... ..
T Consensus 101 ~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 180 (421)
T PRK06777 101 PAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVE 180 (421)
T ss_pred CceEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHH
Confidence 4689999999999999887542 23457888888887664332202221 012222211000 11
Q ss_pred ccHHHHHHHHHHHHHcCCceeEEEEeCCCCCccc-CCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhh
Q 019899 79 FSITALDQAFNQARKRGVKVRGILICNPANPVGN-IIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILE 157 (334)
Q Consensus 79 ~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~-~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~ 157 (334)
.+++.+++.+++. ....++.+|++...+++.|. +.+.+.++++.++|++||+++|+||+|.++.+.+.. .......
T Consensus 181 ~~~~~l~~~~~~~-~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~-~~~~~~~- 257 (421)
T PRK06777 181 EALSSVERLFKAD-IAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKL-FAMEYYD- 257 (421)
T ss_pred HHHHHHHHHHHhc-cCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCch-hhhhhcC-
Confidence 2356677766531 11235666666544788886 578899999999999999999999999987665532 1222111
Q ss_pred ccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh--hcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHH
Q 019899 158 AEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL--TRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRI 235 (334)
Q Consensus 158 ~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 235 (334)
..++ +.++||.++ +|+|+||+++ ++++.+.+... ...++.+++.+.++.+.++..+ + ..+.+++
T Consensus 258 ---~~pD----iv~~sK~l~-~G~pigav~~-~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~---~--~~l~~~~ 323 (421)
T PRK06777 258 ---VKPD----LITMAKSLG-GGMPISAVVG-RAEVMDAPAPGGLGGTYAGNPLAVAAALAVLDVIA---E--EKLCQRA 323 (421)
T ss_pred ---CCCC----EEeeehhhc-CCCceEEEEE-cHHHHhccCCCCCCCCCCcCHHHHHHHHHHHHHHH---h--ccHHHHH
Confidence 1122 337999999 9999999998 78888877532 3456778999988888885422 1 3455666
Q ss_pred HHHHHHHHHHHHhC----C-CcccCCCceeEEeeecCCcCC-CCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEE
Q 019899 236 KKLYDSFVAGLKQL----G-IRCSESSAGLYCWADMSGLIP-SYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRC 309 (334)
Q Consensus 236 ~~~~~~~~~~l~~~----g-~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi 309 (334)
+++.+++.+.|++. + +....+.+.++. +.+..... .....-...+... +.++||.+.|+..++ +++|+
T Consensus 324 ~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~-i~~~~~~~~~~~~~~~~~l~~~-~~~~Gv~i~~~~~~g----~~lr~ 397 (421)
T PRK06777 324 LILGAHLVEVLEKAKASCPAIVDIRARGSMVA-VEFNDPQTGKPSPEFTRQYQRQ-ALEEGLLLLSCGVHG----NVIRF 397 (421)
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEecCceEEEE-EEEecCccCCccHHHHHHHHHH-HHhCCeEEeecCCCC----CEEEE
Confidence 67777777777664 2 222355555554 44432111 1111122334444 345899999876553 68999
Q ss_pred EecC-CCcccHHHHHHHHHHHHH
Q 019899 310 CFTS-LTHEDIPLVIERIQKVAE 331 (334)
Q Consensus 310 ~~~~-~~~~~l~~~l~~l~~~~~ 331 (334)
.++. ++++++++++++|.+++.
T Consensus 398 ~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 398 LYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred eCCCCCCHHHHHHHHHHHHHHHh
Confidence 9863 699999999999998874
No 249
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.87 E-value=2.8e-19 Score=162.07 Aligned_cols=142 Identities=17% Similarity=0.235 Sum_probs=115.4
Q ss_pred CCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhh----hhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHH
Q 019899 17 PSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRD----IRFRTGVELIPVHCRSTDNFAFSITALDQAFNQAR 92 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~ 92 (334)
.+..++++++++|+.+++.+++++||+|+++.+.|.+.... +. ..|.+++.++. .|++++++++++
T Consensus 78 ~~~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~-~~G~~v~~vd~-------~d~~~l~~ai~~-- 147 (427)
T PRK05994 78 GTAALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFK-SFGWQVRWADA-------DDPASFERAITP-- 147 (427)
T ss_pred CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHH-hcCcEEEEECC-------CCHHHHHHhcCc--
Confidence 34588999999999999999999999999999999975543 44 67999988874 278899998875
Q ss_pred HcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEecc
Q 019899 93 KRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGL 172 (334)
Q Consensus 93 ~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 172 (334)
++++|++++|+||+|.+.| +++|.++|+++|+++|+|++|.... .. ..+ +.+.++++.|+
T Consensus 148 ----~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~----~~---~pl------~~gaDivv~S~ 207 (427)
T PRK05994 148 ----RTKAIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPY----LI---RPI------EHGADIVVHSL 207 (427)
T ss_pred ----CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCccccc----cC---Ccc------ccCCcEEEEcC
Confidence 7999999999999999999 8999999999999999999986411 11 111 15667899999
Q ss_pred cccCCCCCceEEEEee
Q 019899 173 SKDLSLPGFRTGVIYS 188 (334)
Q Consensus 173 sK~~~~~g~r~g~i~~ 188 (334)
+|.+|.+|-.+|.+++
T Consensus 208 tK~lgg~~~~~gG~v~ 223 (427)
T PRK05994 208 TKFLGGHGNSMGGIIV 223 (427)
T ss_pred ccccCCCCCcEEEEEE
Confidence 9999866655665554
No 250
>PLN02880 tyrosine decarboxylase
Probab=99.87 E-value=1e-19 Score=167.01 Aligned_cols=315 Identities=14% Similarity=0.118 Sum_probs=202.9
Q ss_pred hhhhhhhhcCCCCCC-----CCcEEEecCcHHHHHHHHHHhcC-----------CCCeEEecCCCCCChhhhhhhccCcE
Q 019899 2 AGFMSQVLGQAVSFD-----PSQIVLTAGATPAVEILCFCLAD-----------HGNALLVPSPYYPGFDRDIRFRTGVE 65 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~-----~~~i~~~~g~~~~~~~~~~~l~~-----------~gd~vl~~~p~~~~~~~~~~~~~g~~ 65 (334)
.+|+.+.++ ++-. ...-++|+|+|+++..++.+.-+ +.-.|++++.+|.+...++. .+|..
T Consensus 128 i~wl~~l~g--~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~-~lGlg 204 (490)
T PLN02880 128 LDWLAKLLN--LPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQ-IAGIH 204 (490)
T ss_pred HHHHHHHhC--CCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHH-HcCCC
Confidence 357777665 3311 12467789999998777655321 12256678889999999998 88874
Q ss_pred ---EEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEecccccc
Q 019899 66 ---LIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGS 142 (334)
Q Consensus 66 ---v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~ 142 (334)
++.||++..+++.+|++.|+++|++....|..+-+|+.+..++++|.+.| +++|.++|++||+|++||.+|+++
T Consensus 205 ~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp---l~eI~~i~~~~~iwlHVDaA~gg~ 281 (490)
T PLN02880 205 PENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP---LLELGKIAKSNGMWFHVDAAYAGS 281 (490)
T ss_pred HHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc---HHHHHHHHHHcCCEEEEehhhHHH
Confidence 78899865557799999999999987777777888888888999999999 999999999999999999999875
Q ss_pred ccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHH-HHHHHHhhccc----------------C
Q 019899 143 IFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESV-LAAAKKLTRFC----------------S 205 (334)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~-~~~~~~~~~~~----------------~ 205 (334)
....+ .+..... ++ ...+.+..++||+++ .+..+|+++.+++.. .+.+.....+. +
T Consensus 282 ~~~~~---~~~~~l~--gi-e~aDSit~d~HKwl~-~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~ 354 (490)
T PLN02880 282 ACICP---EYRHYID--GV-EEADSFNMNAHKWFL-TNFDCSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQ 354 (490)
T ss_pred HHhCH---HHHHHhc--Cc-hhcCEEEECchhhcC-CCccEEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccC
Confidence 43211 1111111 11 234567789999986 778899999865443 23222111110 0
Q ss_pred C-ChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCceeEEeeecCCcCCCC--ChhhHHHH
Q 019899 206 I-SAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSESSAGLYCWADMSGLIPSY--SEKGELEL 281 (334)
Q Consensus 206 ~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~ 281 (334)
. .+....++.-++....+..+.+.++.++.-+.++++.+.|++. ++++..+.....+.+++++..... ...-..++
T Consensus 355 i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~iv~Fr~~~~~~~~~~~~~~n~~l 434 (490)
T PLN02880 355 IPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFSLVCFRLVPPKNNEDNGNKLNHDL 434 (490)
T ss_pred cCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEEeCCCCChhhHHHHHHHH
Confidence 0 0000012222111111113445666666668889999999876 788776544333445665321110 01111346
Q ss_pred HHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC--CCcccHHHHHHHHHHHHHH
Q 019899 282 WDKLLNIAKINVTPGSACHCIEPGWFRCCFTS--LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 282 ~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~--~~~~~l~~~l~~l~~~~~~ 332 (334)
.++|.++..+.+.+...- +..++|+++.+ ++++|++.+++.+.++.++
T Consensus 435 ~~~l~~~g~~~v~~t~~~---g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~ 484 (490)
T PLN02880 435 LDAVNSSGKIFISHTVLS---GKYVLRFAVGAPLTEERHVTAAWKVLQDEASK 484 (490)
T ss_pred HHHHHhCCCEEEEEEEEC---CEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 666666566666543332 24689999875 4679999999999888765
No 251
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.86 E-value=2e-19 Score=162.46 Aligned_cols=154 Identities=15% Similarity=0.195 Sum_probs=118.6
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhh---ccCcEEEEEeCCCCCCccccH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRF---RTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~---~~g~~v~~v~~~~~~~~~~~~ 81 (334)
+.+.++...+ .+..+++++++.|+..++.+++++||+|+++...|.+....+.. ..|.+++.++ + ..|+
T Consensus 74 Le~~lA~l~g--~~~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-d-----~~d~ 145 (436)
T PRK07812 74 VEQRIAALEG--GVAALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE-D-----PDDL 145 (436)
T ss_pred HHHHHHHHhC--CCeEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-C-----CCCH
Confidence 4444544333 45678888999999999999999999999999999876653321 4688887775 1 1278
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
+++++++++ ++++|++.+|+||+|.+.| +++|.++|+++|+++|+|++++... ...+ +
T Consensus 146 e~l~~ai~~------~tklV~ie~~sNp~G~v~D---l~~I~~la~~~gi~liVD~t~a~~~----~~~p---l------ 203 (436)
T PRK07812 146 DAWRAAVRP------NTKAFFAETISNPQIDVLD---IPGVAEVAHEAGVPLIVDNTIATPY----LIRP---L------ 203 (436)
T ss_pred HHHHHhCCC------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccc----cCCc---h------
Confidence 999998875 7899999999999999999 9999999999999999999976411 1111 1
Q ss_pred CCCcEEEEecccccCCCCCceEEEEee
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTGVIYS 188 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g~i~~ 188 (334)
+.+.++++.|++|.+|..|--+|++++
T Consensus 204 ~~GaDivv~S~tK~lgg~G~~i~G~vv 230 (436)
T PRK07812 204 EHGADIVVHSATKYLGGHGTAIAGVIV 230 (436)
T ss_pred hcCCCEEEEecccccCCCCCeEEEEEE
Confidence 156678889999999877766777665
No 252
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.86 E-value=1.4e-19 Score=155.83 Aligned_cols=281 Identities=16% Similarity=0.142 Sum_probs=194.6
Q ss_pred hhcCCCCCCCCcEEEecCcHHHHHHHHHHhc--CC---CCeEEecCCCCCCh-hhhhhhccCc------------EEEEE
Q 019899 8 VLGQAVSFDPSQIVLTAGATPAVEILCFCLA--DH---GNALLVPSPYYPGF-DRDIRFRTGV------------ELIPV 69 (334)
Q Consensus 8 ~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~--~~---gd~vl~~~p~~~~~-~~~~~~~~g~------------~v~~v 69 (334)
.+.+..+ ..+.++++|+++||+..++.... .. .-+|+....+|.+- ...+. ..|- .+.++
T Consensus 92 ~L~~~s~-~~d~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS-~t~~~ky~~~F~Pl~~g~~~v 169 (404)
T COG4992 92 KLVELSP-FADRVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALS-ATGQPKYRKGFGPLLPGFRHV 169 (404)
T ss_pred HHHhhCc-cccEEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeee-ccCChhhccCCCCCCCCceec
Confidence 3433343 48899999999999999987652 11 23677766666542 22222 2221 12233
Q ss_pred eCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHH-HHHHHHHHHHhcCcEEEEeccccccccCCCC
Q 019899 70 HCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRE-TLYELLDFAREKNIHVISDEIYGGSIFGNEE 148 (334)
Q Consensus 70 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~-~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~ 148 (334)
|. .|++++++++++ ++.+|++..-+...|++.+.+ -++.+.++|++||+++|.||++.++..+|+-
T Consensus 170 pf-------nDi~al~~ai~~------~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~ 236 (404)
T COG4992 170 PF-------NDIEALEAAIDE------DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKL 236 (404)
T ss_pred CC-------CCHHHHHHHhcc------CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchH
Confidence 32 389999999997 788788776699999977655 5999999999999999999999987776654
Q ss_pred cchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHH--hhcccCCChHHHHHHHHhhCChHHHHH
Q 019899 149 FVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKK--LTRFCSISAPTQRLLISMLSDTKFIQE 226 (334)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~ 226 (334)
+..-. .+..-.+-++.|.+| .|+++|.+++ ++...+.+.. +.++|+.|+++..+..+.++... +
T Consensus 237 fA~e~---------~gV~PDI~tlaK~Lg-GG~PigA~la-~~~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~--~- 302 (404)
T COG4992 237 FAYEH---------YGVEPDILTLAKALG-GGFPIGAMLA-TEEIASAFTPGDHGSTFGGNPLACAVALAVLEVLL--E- 302 (404)
T ss_pred HHHHH---------hCCCCCEEEeecccc-CCccceeeEE-chhhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHc--c-
Confidence 33221 122223446889998 8899999999 5555555543 45678899999988888775422 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC--CCccc--CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC
Q 019899 227 YLETNKRRIKKLYDSFVAGLKQL--GIRCS--ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI 302 (334)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~l~~~--g~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~ 302 (334)
+...++.+++-++|.+.|+++ .+.+. ...-|+++-+++.... .+.++.+. +.++|+.+.+..
T Consensus 303 --e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~~------~a~~~~~~-~~~~gvL~~~a~----- 368 (404)
T COG4992 303 --EGLLENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEPY------RARDIVRA-LREEGVLVLPAG----- 368 (404)
T ss_pred --hhHHHHHHHHHHHHHHHHHHHhhcCCceeeeecceeEEEEEecCcc------cHHHHHHH-HHHCCeEEecCC-----
Confidence 334455666667777777765 22222 2234677777776543 23577787 556899988644
Q ss_pred CCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 303 EPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 303 ~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
++.+|+..+- +++++++++++++.+++++
T Consensus 369 -~~ViR~~PpL~i~~eei~~~~~~l~~~l~~ 398 (404)
T COG4992 369 -PNVIRFLPPLVITEEEIDEALDALERALAA 398 (404)
T ss_pred -CCeEEecCCccCCHHHHHHHHHHHHHHHHH
Confidence 5689998775 6999999999999999875
No 253
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.86 E-value=4.4e-19 Score=157.28 Aligned_cols=266 Identities=18% Similarity=0.232 Sum_probs=177.4
Q ss_pred CCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhh---ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 17 PSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRF---RTGVELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~---~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
.+.++++++|..|+..++.+++++||+|+++...|.+....++. ..|.++..++. -|++++++++++
T Consensus 70 g~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~-------~d~~~l~~~l~~--- 139 (386)
T PF01053_consen 70 GEDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDP-------TDLEALEAALRP--- 139 (386)
T ss_dssp -SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEEST-------TSHHHHHHHHCT---
T ss_pred ccceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCc-------hhHHHHHhhccc---
Confidence 47899999999999999999999999999999999998776662 26899988873 478999999987
Q ss_pred cCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcC-cEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEecc
Q 019899 94 RGVKVRGILICNPANPVGNIIPRETLYELLDFAREKN-IHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGL 172 (334)
Q Consensus 94 ~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~-~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 172 (334)
++++|++.+|.||+..+.| +++++++|+++| +++++|+.+... ....++. .+.++++.|.
T Consensus 140 ---~t~~v~~EspsNP~l~v~D---l~~i~~~a~~~g~~~~vVDnT~atp-------~~~~pL~------~GaDivv~S~ 200 (386)
T PF01053_consen 140 ---NTKLVFLESPSNPTLEVPD---LEAIAKLAKEHGDILVVVDNTFATP-------YNQNPLE------LGADIVVHSA 200 (386)
T ss_dssp ---TEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHT-------TTC-GGG------GT-SEEEEET
T ss_pred ---cceEEEEEcCCCccccccc---HHHHHHHHHHhCCceEEeeccccce-------eeeccCc------CCceEEEeec
Confidence 8999999999999999999 999999999998 999999998641 1222221 5778999999
Q ss_pred cccCCCCC-ceEEEEeecC-HHHHHHHHHhhcccC--CChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 019899 173 SKDLSLPG-FRTGVIYSYN-ESVLAAAKKLTRFCS--ISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQ 248 (334)
Q Consensus 173 sK~~~~~g-~r~g~i~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 248 (334)
+|.++..+ .=.|.+++++ +++.+.++.....++ .++.....+..-++.. .-+.++..+++..+.+.|++
T Consensus 201 TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~Tl-------~~R~~~~~~nA~~lA~~L~~ 273 (386)
T PF01053_consen 201 TKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGATLSPFDAWLLLRGLRTL-------PLRMERQNENAEALAEFLEE 273 (386)
T ss_dssp TTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B--HHHHHHHHHHHTTH-------HHHHHHHHHHHHHHHHHHHT
T ss_pred cccccCCcceeeEEEEECchhhhhhhhcchhhhcCccchHHHHHHHhcCCCcH-------HHHHHHHHHHHHHHHHHHHh
Confidence 99995343 4467777655 578887776554433 3444444444444442 44556677888889999988
Q ss_pred CC-Cc-c--c---------------CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeE---EcCCCCcC------
Q 019899 249 LG-IR-C--S---------------ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKIN---VTPGSACH------ 300 (334)
Q Consensus 249 ~g-~~-~--~---------------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~---v~~g~~~~------ 300 (334)
+. ++ + + ...+| .+.+++... .+-+.++++...+. ..-|....
T Consensus 274 hp~V~~V~yPgl~s~p~~~~~~~~~~g~gg-l~sf~l~~~---------~~~~~~f~~~l~l~~~~~SlGg~~SLi~~p~ 343 (386)
T PF01053_consen 274 HPKVKRVYYPGLPSHPQHELAKRQMSGGGG-LLSFELKGG---------EEAARRFLDALKLFSIAPSLGGVESLISHPA 343 (386)
T ss_dssp STTEEEEEETTSTTSTTHHHHHHHCSSCTS-EEEEEESSH---------HHHHHHHHHH-SSSEESSS-SSSS-EEEETT
T ss_pred CCCCCeEEEcccccccceeeeeecccccCc-eeEEEeccc---------hhhhHhHHhhhhhHhhhhhcCCccccccccc
Confidence 72 22 1 1 12234 566777653 12333334433332 11122110
Q ss_pred ----C-----------CCCCeEEEEecCCCcccHHHHHHHHHHHHH
Q 019899 301 ----C-----------IEPGWFRCCFTSLTHEDIPLVIERIQKVAE 331 (334)
Q Consensus 301 ----~-----------~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~ 331 (334)
. ..++.+|+|++ .|+.+.+++.|.++++
T Consensus 344 ~~~h~~~~~e~~~~~Gi~~~liRlSvG---lEd~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 344 STSHRSLSPEERAEAGISDGLIRLSVG---LEDPDDLIADLEQALE 386 (386)
T ss_dssp CTTTTTSCHHHHHHTTS-TTEEEEE-----SS-HHHHHHHHHHHHH
T ss_pred chhhccCChhhhhccCCCCCeeEEEec---cCCHHHHHHHHHHhcC
Confidence 0 12367999999 7888899999998875
No 254
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.86 E-value=1.3e-19 Score=175.50 Aligned_cols=287 Identities=11% Similarity=0.034 Sum_probs=201.2
Q ss_pred CcEEEecCcH----HHHHHHHHHhcCC-CC----eEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHH
Q 019899 18 SQIVLTAGAT----PAVEILCFCLADH-GN----ALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAF 88 (334)
Q Consensus 18 ~~i~~~~g~~----~~~~~~~~~l~~~-gd----~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l 88 (334)
+.|.++++++ ++++.++..+.++ || +|+++...|.+....+. ..|.+++.++++ .+..+|+++|++++
T Consensus 584 ~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~-~~G~~vv~v~~d--~~G~vDle~L~~~i 660 (993)
T PLN02414 584 DSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAA-MCGMKIVVVGTD--AKGNINIEELRKAA 660 (993)
T ss_pred CeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHH-HCCCEEEEeccC--CCCCcCHHHHHHHH
Confidence 8999999999 8999999998755 87 89999999999999998 899999999984 44589999999999
Q ss_pred HHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEE
Q 019899 89 NQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHI 168 (334)
Q Consensus 89 ~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (334)
++. ..++++|++++|+|-+|...+ +++|+++|+++|+++++|.++... ...+.... +.+.+++
T Consensus 661 ~~~---~~~ta~V~vt~pSn~gg~e~~---I~eI~~iah~~Galv~vDgAq~~a------~~~l~~p~-----~~GaD~~ 723 (993)
T PLN02414 661 EAH---KDNLAALMVTYPSTHGVYEEG---IDEICDIIHDNGGQVYMDGANMNA------QVGLTSPG-----FIGADVC 723 (993)
T ss_pred hcc---CCCeEEEEEECCCccccccch---HHHHHHHHHHcCCEEEEEecCHHh------ccCcCCcc-----ccCCCEE
Confidence 842 126899999999999999988 999999999999999999997431 11111111 1678899
Q ss_pred EecccccCC----CCCceEEEEeecCHHHHHHHHHh------------hc--ccCCCh------HHHHHHHHhhCChHHH
Q 019899 169 IYGLSKDLS----LPGFRTGVIYSYNESVLAAAKKL------------TR--FCSISA------PTQRLLISMLSDTKFI 224 (334)
Q Consensus 169 ~~s~sK~~~----~~g~r~g~i~~~~~~~~~~~~~~------------~~--~~~~~~------~~~~~~~~~l~~~~~~ 224 (334)
+.|.+|+++ ..|..+|.+.+ ++.+...+-.. .. .++.+. .....+..++... .
T Consensus 724 ~~s~HK~f~~P~G~GGPg~G~l~~-~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~l--G 800 (993)
T PLN02414 724 HLNLHKTFCIPHGGGGPGMGPIGV-KKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMM--G 800 (993)
T ss_pred EecCCccCCcCcccCCCCeeeEEE-chhhcccCCCCccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHH--C
Confidence 999999885 23456899987 66654443211 10 112111 2222223333222 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCceeE--EeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCC
Q 019899 225 QEYLETNKRRIKKLYDSFVAGLKQL-GIRCSESSAGLY--CWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHC 301 (334)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~ 301 (334)
.+.+.+..++...+++++.++|++. ++.+..+.+.++ +.++++.. ...+..+..++.++|+ ++||...- ..|.
T Consensus 801 ~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hEfv~~~~~l-~~~~g~~~~di~krL~-d~Gihapt-~~~p- 876 (993)
T PLN02414 801 SEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHEFIIDLRPF-KNTAGIEPEDVAKRLM-DYGFHAPT-MSWP- 876 (993)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeeeEEEecccc-ccccCCCHHHHHHHHH-HcCcEEee-eccc-
Confidence 4456677788888999999999773 444444443322 22444422 1111234478999977 68997543 3342
Q ss_pred CCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 302 IEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 302 ~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
.++.+|++... .+++|+|+++++|..+.++
T Consensus 877 -v~~~lmiepTE~~skeelDrf~~al~~i~~e 907 (993)
T PLN02414 877 -VPGTLMIEPTESESKAELDRFCDALISIREE 907 (993)
T ss_pred -cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHH
Confidence 37789999885 5899999999999888754
No 255
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.86 E-value=5.5e-19 Score=156.99 Aligned_cols=271 Identities=11% Similarity=0.072 Sum_probs=182.4
Q ss_pred CCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhh---hccCcEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 17 PSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIR---FRTGVELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~---~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
.+..++++++++|+..++.+++++||+|+++...|.+....+. ...|.++..++. .|.+++++++++
T Consensus 77 ~~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~-------~d~~~l~~~l~~--- 146 (395)
T PRK08114 77 GAGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDP-------LIGADIAKLIQP--- 146 (395)
T ss_pred CCeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECC-------CCHHHHHHhcCC---
Confidence 5688999999999999999999999999999999988776652 157999988873 367889999976
Q ss_pred cCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc--CcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEec
Q 019899 94 RGVKVRGILICNPANPVGNIIPRETLYELLDFAREK--NIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYG 171 (334)
Q Consensus 94 ~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~--~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 171 (334)
++++|++.+|+||+|.+.| +++|+++|+++ |+++++|.+|+. + .. ..... .+.+++++|
T Consensus 147 ---~TrlV~~EtpsNp~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~----p---~~-~~pl~-----~GaDivv~S 207 (395)
T PRK08114 147 ---NTKVVFLESPGSITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAA----G---VL-FKALD-----FGIDISIQA 207 (395)
T ss_pred ---CceEEEEECCCCCCCEeec---HHHHHHHHHHhCCCCEEEEECCCcc----c---cc-cCHHH-----cCCcEEEEc
Confidence 7999999999999999999 99999999998 499999999864 1 11 22222 688899999
Q ss_pred ccccCCCCC-ceEEEEeecCHHHHHHHHHhhccc--CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 019899 172 LSKDLSLPG-FRTGVIYSYNESVLAAAKKLTRFC--SISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQ 248 (334)
Q Consensus 172 ~sK~~~~~g-~r~g~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 248 (334)
.+|+++.++ .-.|.++. +++..+.++...... ..++.....+..-++.. .-+.++..+++..+.+.|++
T Consensus 208 ~tKyl~Ghsdv~~G~v~~-~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~TL-------~lR~~~~~~na~~va~~L~~ 279 (395)
T PRK08114 208 GTKYLVGHSDAMIGTAVA-NARCWEQLRENSYLMGQMVDADTAYMTSRGLRTL-------GVRLRQHEESSLKVAEWLAE 279 (395)
T ss_pred CcccccCCCcceeEEEEc-CHHHHHHHHHHHHhccCCCCHHHHHHHHcCCCcH-------HHHHHHHHHHHHHHHHHHHc
Confidence 999885454 66776665 676666665433222 23444444344444432 34456677888888888887
Q ss_pred CC-Cc---cc---------------CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcC------C--
Q 019899 249 LG-IR---CS---------------ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACH------C-- 301 (334)
Q Consensus 249 ~g-~~---~~---------------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~------~-- 301 (334)
+. ++ +. ...+| .+.+++....+ ......+.+. ++-..+.+.-|..-. +
T Consensus 280 hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg-~~sf~l~~~~~---~~~~~~f~~~-l~l~~~a~SlGg~~SLi~~~~~~~ 354 (395)
T PRK08114 280 HPEVARVNHPALPGCKGHEFWKRDFTGSSG-LFSFVLKKKLT---DEQLANYLDN-FSLFSMAYSWGGFESLILANQPEE 354 (395)
T ss_pred CCCEeEEECCCCCCCccHHHHHhhCCCCce-EEEEEecCccc---HHHHHHHHHh-CCcceeecccCCccceeccCCchh
Confidence 62 11 11 11233 34466642101 1122334333 232222222222110 0
Q ss_pred -----------CCCCeEEEEecCCCcccHHHHHHHHHHHHHH
Q 019899 302 -----------IEPGWFRCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 302 -----------~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
..++.+|+|++ -|+.+.+++.|.+++++
T Consensus 355 ~~~~~~~~~~~~~~~liRlSvG---lEd~~DLi~Dl~~Al~~ 393 (395)
T PRK08114 355 IAAIRPAGEVDFTGTLIRLHIG---LEDVDDLIADLAAGFAR 393 (395)
T ss_pred hhccCChhHhcCCCCeEEEEec---cCCHHHHHHHHHHHHHh
Confidence 01257999999 77888899999998875
No 256
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.86 E-value=8.6e-20 Score=177.42 Aligned_cols=307 Identities=15% Similarity=0.082 Sum_probs=198.5
Q ss_pred hhhhhhcCCCCCCCC--cEEEecCcHHHHHHHHHHh-cCCCCeEEecCCCCCChhhhhh--hccCcEEEEEeCCCC----
Q 019899 4 FMSQVLGQAVSFDPS--QIVLTAGATPAVEILCFCL-ADHGNALLVPSPYYPGFDRDIR--FRTGVELIPVHCRST---- 74 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~--~i~~~~g~~~~~~~~~~~l-~~~gd~vl~~~p~~~~~~~~~~--~~~g~~v~~v~~~~~---- 74 (334)
..++.+++.++++++ +|++|+|+|+++++++..+ .++||+|+++.-.|.+.....+ ...|.++..++++.+
T Consensus 82 ~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~ 161 (805)
T PLN02724 82 SARQQVLEYFNAPPSDYACVFTSGATAALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQP 161 (805)
T ss_pred HHHHHHHHHhCCCccceEEEEeCChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccc
Confidence 345666777888766 4899999999999999988 6789999999888888765433 135889999887421
Q ss_pred --CCccccH--HHHHHHHHH----HHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc-----CcEEEEeccccc
Q 019899 75 --DNFAFSI--TALDQAFNQ----ARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK-----NIHVISDEIYGG 141 (334)
Q Consensus 75 --~~~~~~~--~~l~~~l~~----~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~-----~~~vi~D~~~~~ 141 (334)
....+++ +++++.+++ ....+.+++++.+++.+|.||.++|.+.+..+.+.++.+ ++++++|.+++.
T Consensus 162 ~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~ 241 (805)
T PLN02724 162 TNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGC 241 (805)
T ss_pred cccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhc
Confidence 1112332 556655421 001123668999999999999999955443333333222 368999999875
Q ss_pred cccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh--------------------
Q 019899 142 SIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT-------------------- 201 (334)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~-------------------- 201 (334)
+....++.. .+.++++.|++|++|.| ..+|++++ ++++.+.+....
T Consensus 242 ----g~~piDv~~--------~~~Dfl~~S~HK~~GgP-~G~G~L~v-r~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~ 307 (805)
T PLN02724 242 ----GTSPPDLSR--------YPADFVVVSFYKIFGYP-TGLGALLV-RRDAAKLLKKKYFGGGTVAASIADIDFVKRRE 307 (805)
T ss_pred ----CCCCCChhh--------cCCCEEEEecceeccCC-CCceEEEE-ehhhhhhhcCCccCCCceEEEecccceeeccc
Confidence 333444443 46678999999999722 34799988 556655544210
Q ss_pred ------cccCCChHHHHHHHHhhCChHHHHH-HHHHHHHHHHHHHHHHHHHHHhC-------CCcccCCC--------ce
Q 019899 202 ------RFCSISAPTQRLLISMLSDTKFIQE-YLETNKRRIKKLYDSFVAGLKQL-------GIRCSESS--------AG 259 (334)
Q Consensus 202 ------~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~-------g~~~~~~~--------~g 259 (334)
..++.|.+...++.++++. +.+ .+++..++..+..+++.+.|.++ +++++.+. .+
T Consensus 308 ~~~~rfE~GT~n~~~i~~l~aal~~---l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~ 384 (805)
T PLN02724 308 RVEQRFEDGTISFLSIAALRHGFKL---LNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQG 384 (805)
T ss_pred cHHHHhcCCCcchhHHHHHHHHHHH---HHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCccccc
Confidence 0123344444455544432 222 24667788888889999999876 25565432 12
Q ss_pred eEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC---------------------------------CCCe
Q 019899 260 LYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI---------------------------------EPGW 306 (334)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~---------------------------------~~~~ 306 (334)
-.+.|.+...... .-....+..++.++||.++.|..|.+. ..+.
T Consensus 385 ~ivsFnv~~~~~~---~v~~~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~ 461 (805)
T PLN02724 385 PIVTFNLKRADGS---WVGHREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGA 461 (805)
T ss_pred CEEEEEEEcCCCC---EeCHHHHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccce
Confidence 2333444332110 011234556677899999999887531 1278
Q ss_pred EEEEecC-CCcccHHHHHHHHHHHH
Q 019899 307 FRCCFTS-LTHEDIPLVIERIQKVA 330 (334)
Q Consensus 307 iRi~~~~-~~~~~l~~~l~~l~~~~ 330 (334)
+|+|+++ .|.+|++++++.|++..
T Consensus 462 vRvS~g~ynt~eDvd~lv~~l~~~~ 486 (805)
T PLN02724 462 VRVSFGYMSTFEDCQKFIDFIISSF 486 (805)
T ss_pred EEEEcCccCCHHHHHHHHHHHHHHh
Confidence 9999997 59999999999999854
No 257
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.86 E-value=1.5e-19 Score=162.83 Aligned_cols=303 Identities=13% Similarity=0.075 Sum_probs=199.0
Q ss_pred hhhhhhhcCCCCCC-C-CcEEE--ecCcHHHHHHHHHHhc--------CC-----CCeEEecCCCCCChhhhhhhccCcE
Q 019899 3 GFMSQVLGQAVSFD-P-SQIVL--TAGATPAVEILCFCLA--------DH-----GNALLVPSPYYPGFDRDIRFRTGVE 65 (334)
Q Consensus 3 ~~~~~~~~~~~~~~-~-~~i~~--~~g~~~~~~~~~~~l~--------~~-----gd~vl~~~p~~~~~~~~~~~~~g~~ 65 (334)
+|+.+. ++++ + +++.. |+|+|++++.++.+.. .. ..+|+++.-.|+++...++ ..|.+
T Consensus 87 ~~la~l----lg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~-~lg~~ 161 (431)
T TIGR01788 87 NMLADL----WHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFAR-YFDVE 161 (431)
T ss_pred HHHHHH----hCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHH-HcCce
Confidence 445544 4455 3 45554 8999999999876542 11 2369999999999999988 88999
Q ss_pred EEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc------CcEEEEeccc
Q 019899 66 LIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK------NIHVISDEIY 139 (334)
Q Consensus 66 v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~------~~~vi~D~~~ 139 (334)
++.+|+++ +++.+|+++|+++|++ ++.+|.++..+|.||.+.| +++|.++|+++ ++++++|.+|
T Consensus 162 v~~i~~d~-~~~~vd~~~L~~~i~~------~t~lV~~t~g~t~tG~idp---i~~I~~i~~~~~~~~~~~~~~HvDaaq 231 (431)
T TIGR01788 162 LREVPMDP-GRYVIDPEQVVEAVDE------NTIGVVCILGTTYTGEYED---VKALNDALDEYNAKTGWDIPIHVDAAS 231 (431)
T ss_pred eEEEecCC-CceeeCHHHHHHHHhh------CCeEEEEEeCCCCCcccCC---HHHHHHHHHHHHhhhCCCceEEEeccc
Confidence 99999853 4458999999999987 7888999999999999999 99999999999 9999999999
Q ss_pred ccccc---CCCCcchhhhhhhccccCCCcEEEEecccccC-CCCCceEEEEeecCHH-HHHHHHHhhcc---------cC
Q 019899 140 GGSIF---GNEEFVSMAEILEAEEVDKDRVHIIYGLSKDL-SLPGFRTGVIYSYNES-VLAAAKKLTRF---------CS 205 (334)
Q Consensus 140 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~-~~~g~r~g~i~~~~~~-~~~~~~~~~~~---------~~ 205 (334)
+.+.. -+.....+. ..+.+.+..|.||+. +.. .+|+++.++++ +.+.+.....+ ..
T Consensus 232 ~g~~~p~~~~~~~~~~~--------~~~~DSis~s~HK~~~~P~--g~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~ 301 (431)
T TIGR01788 232 GGFIAPFVYPDLEWDFR--------LPRVKSINVSGHKYGLVYP--GVGWVIWRDEEALPEELIFHVNYLGGDEPTFTLN 301 (431)
T ss_pred HHHHHHHhCCCchhhcC--------CCCceEEEECchhccCCCC--CcEEEEEeChHHcchhheecccccCCCCCCccee
Confidence 86431 111111111 034556777999976 444 47888886654 32333211111 11
Q ss_pred CChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCC--CceeEEeeecCCcCCCCChhhHHHHH
Q 019899 206 ISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSES--SAGLYCWADMSGLIPSYSEKGELELW 282 (334)
Q Consensus 206 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~ 282 (334)
.+.....++..++....+...-+++..++..++.+++.+.|++. ++++..+ ..+.++ |++..... ...+..++.
T Consensus 302 ~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~-Fr~~~~~~--~~~~~~~l~ 378 (431)
T TIGR01788 302 FSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVA-FKLKDDAD--PGYTLYDLS 378 (431)
T ss_pred cCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEE-EEeCCCCC--CCcCHHHHH
Confidence 12222122223322111113446777888899999999999988 5887754 444443 55543211 112345677
Q ss_pred HHHHHhcCeEEcCCCCc-CCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHHcC
Q 019899 283 DKLLNIAKINVTPGSAC-HCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAETCK 334 (334)
Q Consensus 283 ~~ll~~~gi~v~~g~~~-~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~~ 334 (334)
+. |.+.|+.+..-... .......+|+++.+ .+++.++.+++.|++++..++
T Consensus 379 ~~-L~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (431)
T TIGR01788 379 HR-LRERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALAYLE 431 (431)
T ss_pred HH-HHHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHhhC
Confidence 77 55689865322211 01123468999864 688999999999999987653
No 258
>PLN02590 probable tyrosine decarboxylase
Probab=99.86 E-value=5e-19 Score=162.48 Aligned_cols=315 Identities=14% Similarity=0.115 Sum_probs=205.9
Q ss_pred hhhhhhhhcCCCCCC-----CCcEEEecCcHHHHHHHHHHhcC-----------CCCeEEecCCCCCChhhhhhhccCc-
Q 019899 2 AGFMSQVLGQAVSFD-----PSQIVLTAGATPAVEILCFCLAD-----------HGNALLVPSPYYPGFDRDIRFRTGV- 64 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~-----~~~i~~~~g~~~~~~~~~~~l~~-----------~gd~vl~~~p~~~~~~~~~~~~~g~- 64 (334)
-+|+.+.++ ++-. ...=++++|+|+++..++.+.-. +.-.|++++.+|+++..++. .+|.
T Consensus 176 i~wl~~l~g--lp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~-ilGlg 252 (539)
T PLN02590 176 LDWLAKLLQ--LPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACL-IGGIH 252 (539)
T ss_pred HHHHHHHhC--CCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHH-HcCCC
Confidence 467777766 4321 13456789999988777665321 12256667889999999998 8886
Q ss_pred --EEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEecccccc
Q 019899 65 --ELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGS 142 (334)
Q Consensus 65 --~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~ 142 (334)
+++.||++..+++.+|++.|+++|++....|..+-+|+.+..+.+||.+-| +++|.++|++||+|++||.+|+++
T Consensus 253 ~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDp---l~~Ia~i~~~~g~WlHVDaA~GG~ 329 (539)
T PLN02590 253 EENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDP---LVPLGNIAKKYGIWLHVDAAYAGN 329 (539)
T ss_pred cccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCC---HHHHHHHHHHhCCeEEEecchhhh
Confidence 588999865457799999999999987777777888888888999999999 999999999999999999999986
Q ss_pred ccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHH-HHHHHHHhhcc----------------c-
Q 019899 143 IFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNES-VLAAAKKLTRF----------------C- 204 (334)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~-~~~~~~~~~~~----------------~- 204 (334)
....+. ...+.. ++ ...+-+..++||++. .+..+|.++.+++. +.+.+.....+ +
T Consensus 330 al~~~~---~r~~~~--Gi-e~ADSit~D~HK~l~-~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~ 402 (539)
T PLN02590 330 ACICPE---YRKFID--GI-ENADSFNMNAHKWLF-ANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQ 402 (539)
T ss_pred hhcChh---hHHHhc--CC-ccCCEEEECchhhcC-cCcCEEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCccccC
Confidence 542222 222221 11 222345568999886 66789999887664 33333211100 0
Q ss_pred -CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCceeEEeeecCCc-CCCC-ChhhHHH
Q 019899 205 -SISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSESSAGLYCWADMSGL-IPSY-SEKGELE 280 (334)
Q Consensus 205 -~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~g~~~~~~~~~~-~~~~-~~~~~~~ 280 (334)
..+. ...++..++.-..+..+.+.++.++.-+.++++.+.+++. +|++..+..-..+.|+..+. .+.. ...--.+
T Consensus 403 i~lsR-r~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l~iVcFr~~~~~~~~~~~~~ln~~ 481 (539)
T PLN02590 403 ISLSR-RFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAPVDGDEDQCNERNRE 481 (539)
T ss_pred CCCCC-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceEEEEEEecCCCCCHHHHHHHHHH
Confidence 1111 1123333332222335567888888889999999999887 78877654433333444321 1110 0111235
Q ss_pred HHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC--CCcccHHHHHHHHHHHHHHc
Q 019899 281 LWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS--LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 281 ~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~--~~~~~l~~~l~~l~~~~~~~ 333 (334)
+.+++.++..+.+.+...- +..++|+++++ +++++++.+++.|.+...++
T Consensus 482 l~~~l~~~G~~~vs~t~~~---g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~ 533 (539)
T PLN02590 482 LLAAVNSTGKIFISHTALS---GKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKF 533 (539)
T ss_pred HHHHHHhCCCEEEEeeEEC---CEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Confidence 6666555433455443321 24589999875 58899999999999887653
No 259
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.86 E-value=3.1e-19 Score=151.69 Aligned_cols=295 Identities=11% Similarity=0.095 Sum_probs=207.1
Q ss_pred hhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhh--ccC--cEEEEEeCCCCCCccccHHH
Q 019899 8 VLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRF--RTG--VELIPVHCRSTDNFAFSITA 83 (334)
Q Consensus 8 ~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~--~~g--~~v~~v~~~~~~~~~~~~~~ 83 (334)
+..+.|+++.-++-+.+|+. |+.+++.+|++|||+|+-.+-.++++...... ..| .+++.++++. +...+|.|+
T Consensus 80 rak~LFga~~anVQPhSGs~-AN~av~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~-et~~IDyD~ 157 (413)
T COG0112 80 RAKKLFGAEYANVQPHSGSQ-ANQAVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDP-ETGLIDYDE 157 (413)
T ss_pred HHHHHhCCCccccCCCCchH-HHHHHHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEeccccc-ccCccCHHH
Confidence 33455667777888777665 88999999999999999998877776654320 233 4566677653 556899999
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCC
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDK 163 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (334)
+++...+. +||+|+.-....| ..+| .+++.++|.+-|.++.+|-+|-...-.+..+++-. +
T Consensus 158 ~~k~a~e~-----kPK~ii~G~SaY~--r~id---~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~---------~ 218 (413)
T COG0112 158 VEKLAKEV-----KPKLIIAGGSAYS--RPID---FKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPL---------P 218 (413)
T ss_pred HHHHHHHh-----CCCEEEECccccc--cccC---HHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCC---------C
Confidence 99999986 9997776654444 5667 88888888999999999999854322222222211 2
Q ss_pred CcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhccc-CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHH
Q 019899 164 DRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFC-SISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSF 242 (334)
Q Consensus 164 ~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 242 (334)
-..++.+|.+|++ .|.|.|.|+++++++.+.+.+.-.++ ..+++....++.+....+.++..+.++.+++.++++.+
T Consensus 219 ~AdvVTtTTHKTl--rGPrGG~Il~~~eel~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaL 296 (413)
T COG0112 219 HADVVTTTTHKTL--RGPRGGIILTNDEELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKAL 296 (413)
T ss_pred ccceEeCCcccCC--CCCCceEEEeccHHHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHH
Confidence 3568889999999 77899999996678888887754444 34555555555555554544555688899999999999
Q ss_pred HHHHHhCCCcccC-CCceeEEeeecCC-cCCCCChhhHHHHHHHHHHhcCeEEc----CCCCcCCCCCCeEEEEecC---
Q 019899 243 VAGLKQLGIRCSE-SSAGLYCWADMSG-LIPSYSEKGELELWDKLLNIAKINVT----PGSACHCIEPGWFRCCFTS--- 313 (334)
Q Consensus 243 ~~~l~~~g~~~~~-~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~ll~~~gi~v~----~g~~~~~~~~~~iRi~~~~--- 313 (334)
.+.|.+.|+++.. ...+..+.+++.. ..+ . ..+..+|.+.||.+. |.-.-++-.++.|||+...
T Consensus 297 Ae~l~~~G~~vvsGgTdnHl~lVDl~~~~~~------G-k~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~Tt 369 (413)
T COG0112 297 AEALKERGFKVVSGGTDNHLVLVDLRSKGLT------G-KKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTT 369 (413)
T ss_pred HHHHHHcCCeEecCCccceEEEEEcccCCCC------H-HHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhh
Confidence 9999999999874 3345556678773 222 2 445555788899875 2222222235779998753
Q ss_pred --CCcccHHHHHHHHHHHHHH
Q 019899 314 --LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 314 --~~~~~l~~~l~~l~~~~~~ 332 (334)
..++|+++..+.+.++++.
T Consensus 370 rG~~e~e~~~Ia~~I~~vl~~ 390 (413)
T COG0112 370 RGFGEAEMEEIADLIADVLDG 390 (413)
T ss_pred cCCCHHHHHHHHHHHHHHHhc
Confidence 3567888888888888764
No 260
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.86 E-value=1.1e-18 Score=157.99 Aligned_cols=293 Identities=15% Similarity=0.093 Sum_probs=180.7
Q ss_pred CcEEEecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChhhhhhhccC-------------cEEEEEeCCCCCCcccc--
Q 019899 18 SQIVLTAGATPAVEILCFCLA--DHGNALLVPSPYYPGFDRDIRFRTG-------------VELIPVHCRSTDNFAFS-- 80 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~~g-------------~~v~~v~~~~~~~~~~~-- 80 (334)
+.+++++++++|+..++.... ....+|+....+|.+.........| ..+..+|.++.. ...+
T Consensus 102 ~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~ 180 (425)
T PRK07495 102 KKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVEL-HGVSVE 180 (425)
T ss_pred CEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCccc-ccccHH
Confidence 689999999999999887542 3345788888777765322110111 123445543211 1222
Q ss_pred --HHHHHHHHHHHHHcCCceeEEEEeCCCCCccc-CCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhh
Q 019899 81 --ITALDQAFNQARKRGVKVRGILICNPANPVGN-IIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILE 157 (334)
Q Consensus 81 --~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~-~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~ 157 (334)
++.+++.+++. ....++.+|++...+..+|. ..|.+.++++.++|++||+++|+||+|.++...|..+ .. ..
T Consensus 181 ~~~~~l~~~~~~~-~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~-a~---~~ 255 (425)
T PRK07495 181 QSLAALDKLFKAD-VDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLF-AM---EH 255 (425)
T ss_pred HHHHHHHHHHHhc-cCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCce-ee---cc
Confidence 34445555421 11235776665544445784 5788899999999999999999999999876555321 11 11
Q ss_pred ccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHH--hhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHH
Q 019899 158 AEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKK--LTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRI 235 (334)
Q Consensus 158 ~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 235 (334)
.+.+..+.+++|.++ +|+++|++++ ++++.+.+.. ....++.+++.+.++.+.++..+ + ....+++
T Consensus 256 -----~gv~pDi~tlsK~l~-~G~pigav~~-~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~---~--~~l~~~~ 323 (425)
T PRK07495 256 -----HEVAADLTTMAKGLA-GGFPLAAVTG-RAEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIE---E--EDLCERA 323 (425)
T ss_pred -----cCCCCCEEeehhhhc-CCccceEEEE-cHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHH---h--chHHHHH
Confidence 233445788999998 8999999998 7888877753 33456788888886666654321 1 1233344
Q ss_pred HHHHHHHHHHHHhC----CCcccCCCceeEEeeecCCcCCC-CChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEE
Q 019899 236 KKLYDSFVAGLKQL----GIRCSESSAGLYCWADMSGLIPS-YSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCC 310 (334)
Q Consensus 236 ~~~~~~~~~~l~~~----g~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~ 310 (334)
+++.+++.+.|+++ +........|+++|+++...... ........+... +.++|+.+.+... ..+.+|+.
T Consensus 324 ~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~iel~~~~~~~~~~~~~~~~~~~-~~~~Gvl~~~~g~----~~~~~r~~ 398 (425)
T PRK07495 324 NQLGNRLKQRLASLRETVPEIADIRGPGFMNAVEFNDADSGLPSAEFANRVRLK-ALEKGLILLTCGV----HGNVIRFL 398 (425)
T ss_pred HHHHHHHHHHHHHHHhhCCCeeeeecCceEEEEEEecCCCCCccHHHHHHHHHH-HHHCCeEEeecCC----CCCEEEEe
Confidence 44444444444432 21111112388899988542111 011123345666 4458999865321 13679998
Q ss_pred ecC-CCcccHHHHHHHHHHHHHHc
Q 019899 311 FTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 311 ~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
.+- ++++++++++++|.+++++.
T Consensus 399 Ppl~it~~~id~~~~~l~~~l~~~ 422 (425)
T PRK07495 399 APITIQDDVFAEALDILEASILEA 422 (425)
T ss_pred CCCccCHHHHHHHHHHHHHHHHHH
Confidence 774 69999999999999999764
No 261
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.86 E-value=7.6e-19 Score=155.54 Aligned_cols=302 Identities=15% Similarity=0.137 Sum_probs=204.2
Q ss_pred CCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhh-hhhccCcEEEEEeCC--------CCCCccccHHHHHHH
Q 019899 17 PSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRD-IRFRTGVELIPVHCR--------STDNFAFSITALDQA 87 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~-~~~~~g~~v~~v~~~--------~~~~~~~~~~~l~~~ 87 (334)
.+.++++++++.|+++++..++++||.| +++.|...... +. ..|..++-++.+ .+..+.+|++.++++
T Consensus 86 ~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~ahIe-~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~a 162 (450)
T TIGR02618 86 FKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTTRYHQE-KNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKL 162 (450)
T ss_pred CCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHHHHHHH-hCCeEEEeeecccccccccCCCCCCCcCHHHHHHH
Confidence 5579999999999998877778999976 77777555554 55 788866666432 234578899999999
Q ss_pred HHHHHHcCCceeEEEEeCCCC-CcccCCCHHHHHHHHHHHHhcCcEEEEecccccc-c-c-----CCCCcchhhhhhhcc
Q 019899 88 FNQARKRGVKVRGILICNPAN-PVGNIIPRETLYELLDFAREKNIHVISDEIYGGS-I-F-----GNEEFVSMAEILEAE 159 (334)
Q Consensus 88 l~~~~~~~~~~~~i~~~~p~n-ptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~-~-~-----~~~~~~~~~~~~~~~ 159 (334)
|++.. ..++.++.+++++| ..|.++|.++++++.++|++||++|+.|.+.... . + ++....++.+...+
T Consensus 163 I~~~~--~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e- 239 (450)
T TIGR02618 163 IDEVG--ADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKE- 239 (450)
T ss_pred hcccc--CcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHH-
Confidence 98521 12455788888877 5589999999999999999999999999997541 1 1 11122334222221
Q ss_pred ccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc-------cCCChHHHHHHHHhhCChHHHHHHHHHHH
Q 019899 160 EVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF-------CSISAPTQRLLISMLSDTKFIQEYLETNK 232 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 232 (334)
+-...+....|..|..+.+- .|++..+++++.++++..... +..+.....+++..+.+. ++ ....
T Consensus 240 -~~~~aD~~~~S~~Kd~~~~~--GG~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~--~~---~~y~ 311 (450)
T TIGR02618 240 -MMSYADGCTMSGKKDCLVNI--GGFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIREA--VD---YEYI 311 (450)
T ss_pred -HhccCcEEEEeeccCCCCCC--ceEEEeCCHHHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHHh--hh---HHHH
Confidence 11233346678888887551 366666899999888776322 223334444444444331 11 1222
Q ss_pred HHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCC--CCChhhHHHHHHHHHHhcCeEEc-CCCCc-CCC------
Q 019899 233 RRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIP--SYSEKGELELWDKLLNIAKINVT-PGSAC-HCI------ 302 (334)
Q Consensus 233 ~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~gi~v~-~g~~~-~~~------ 302 (334)
++-..+.++|.+.|.+.|+++..|.+|..++++..+... ......+..++.+|..+.||.-. -|+.. +-.
T Consensus 312 ~~r~~~a~~La~~L~~~Gvpv~~p~ggh~V~vda~~~lph~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~ 391 (450)
T TIGR02618 312 EHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFLPHIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEH 391 (450)
T ss_pred HHHHHHHHHHHHHHHHCCCcccCCCCcceEEEEhHHhCCCCChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcc
Confidence 333345788999999999999888899889898765322 12345677899999999999533 34431 111
Q ss_pred -C--CCeEEEEecC--CCcccHHHHHHHHHHHHHH
Q 019899 303 -E--PGWFRCCFTS--LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 303 -~--~~~iRi~~~~--~~~~~l~~~l~~l~~~~~~ 332 (334)
. -.-+|+.+.. .|.+.++.+.+.+..+.++
T Consensus 392 ~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 426 (450)
T TIGR02618 392 HRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKH 426 (450)
T ss_pred cCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 0 1468999985 4999999999999988765
No 262
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.85 E-value=8.4e-19 Score=160.05 Aligned_cols=295 Identities=13% Similarity=0.070 Sum_probs=182.5
Q ss_pred CCCcEEEecCcHHHHHHHHHHh--cCCCCeEEecCCCCCChhhh-hhhccC-------------cEEEEEeCCCCCC--c
Q 019899 16 DPSQIVLTAGATPAVEILCFCL--ADHGNALLVPSPYYPGFDRD-IRFRTG-------------VELIPVHCRSTDN--F 77 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l--~~~gd~vl~~~p~~~~~~~~-~~~~~g-------------~~v~~v~~~~~~~--~ 77 (334)
..+.+++++++++|+..++... .....+|+....+|.+.... +. ..+ ..+..+|.++... .
T Consensus 102 ~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (433)
T PRK08117 102 GLDCFFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALS-VTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPK 180 (433)
T ss_pred CCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHh-hcCCCccccccCCCCCCCcEEeCCCccccccc
Confidence 3568999999999999998763 22345677777777654322 21 111 1123333321100 0
Q ss_pred --------cccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEEEEeccccccccCCCC
Q 019899 78 --------AFSITALDQAFNQARKRGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHVISDEIYGGSIFGNEE 148 (334)
Q Consensus 78 --------~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~ 148 (334)
..+++++++.++... ...++.+|++.......|.+. +.+.++++.++|++||+++|+||+|.++...|..
T Consensus 181 ~~~~~~~~~~~~~~l~~~~~~~~-~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~ 259 (433)
T PRK08117 181 GEDPEVCFLECLRDLESLFKHQV-TPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEW 259 (433)
T ss_pred cCchhHHHHHHHHHHHHHHHhcc-CCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccc
Confidence 025566666665311 123566555554477778765 6778999999999999999999999987665543
Q ss_pred cchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh--hcccCCChHHHHHHHHhhCChHHHHH
Q 019899 149 FVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL--TRFCSISAPTQRLLISMLSDTKFIQE 226 (334)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~ 226 (334)
+.. .. .+....+.+++|.++ +|+++|++++ ++++.+.+... ...++.+++.+.++.+.++..+ +
T Consensus 260 ~~~-~~--------~gv~pDi~t~sK~lg-~G~pigav~~-~~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~--~- 325 (433)
T PRK08117 260 FAA-QT--------FGVVPDIMTIAKGIA-SGLPLSAVVA-SKELMEQWPLGSHGTTFGGNPVACAAALATLEVIK--E- 325 (433)
T ss_pred hhH-hh--------cCCCCCEeehhhhcc-CCCcceeEEE-cHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHH--h-
Confidence 221 11 122223468999999 8999999998 88888777532 3345678888888888876432 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC----CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC
Q 019899 227 YLETNKRRIKKLYDSFVAGLKQL----GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI 302 (334)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~l~~~----g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~ 302 (334)
....++++++.+++.+.|+++ ++.......|.++++.+..............+... +.++||.+.+...
T Consensus 326 --~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~-l~~~Gv~~~~~g~---- 398 (433)
T PRK08117 326 --EKLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDPDGEPDGDAVEKILDK-CLEKGLLFYLCGN---- 398 (433)
T ss_pred --ccHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcEEEEEEecCCCCcchHHHHHHHHH-HHHCCCEEeecCC----
Confidence 123344555556666666553 22222233456666777432111111233455666 4558998876321
Q ss_pred CCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 303 EPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 303 ~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
..+.+|++++. .+++++++++++|.+++++.
T Consensus 399 ~~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~ 430 (433)
T PRK08117 399 AGNVLRMIPPLTVTKEEIDEGLDILDEALTEY 430 (433)
T ss_pred CCCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 24689999753 79999999999999998753
No 263
>PLN03032 serine decarboxylase; Provisional
Probab=99.85 E-value=3.2e-19 Score=157.49 Aligned_cols=280 Identities=11% Similarity=0.007 Sum_probs=187.1
Q ss_pred hhcCCCCCCCCcE--EEecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHH
Q 019899 8 VLGQAVSFDPSQI--VLTAGATPAVEILCFCLA--DHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITA 83 (334)
Q Consensus 8 ~~~~~~~~~~~~i--~~~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~ 83 (334)
.+++.++++++++ ++|+|+|+++..++.+.. .++..|+++.-.|++....++ .+|.+++.+|+ +.++.+|+++
T Consensus 74 ~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~-~lg~~~~~V~~--d~~g~id~~~ 150 (374)
T PLN03032 74 WFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAAR-MYRMEAVKVPT--LPSGEIDYDD 150 (374)
T ss_pred HHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHH-HcCCCCeEeee--CCCCcCcHHH
Confidence 3444455777777 999999999998887653 244589999999999999998 88988889988 3456899999
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcC-----cEEEEeccccccccCCCCcchhhhhhhc
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKN-----IHVISDEIYGGSIFGNEEFVSMAEILEA 158 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~-----~~vi~D~~~~~~~~~~~~~~~~~~~~~~ 158 (334)
|+++|++. ..++.+++++..+|++|.+.| +++|.++|+++| +|+++|.+|+.+..+-....+..
T Consensus 151 L~~~i~~~---~~~~~lvv~tagtt~tG~idp---i~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~----- 219 (374)
T PLN03032 151 LERALAKN---RDKPAILNVNIGTTVKGAVDD---LDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEV----- 219 (374)
T ss_pred HHHHHHHc---CCCCEEEEEEecCcCCccCCC---HHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCccc-----
Confidence 99999862 124677888888999999999 889999999996 58999999976432100000000
Q ss_pred cccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc-------cCCChHH--HHHHHHhhCChHHHHHHHH
Q 019899 159 EEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF-------CSISAPT--QRLLISMLSDTKFIQEYLE 229 (334)
Q Consensus 159 ~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~-------~~~~~~~--~~~~~~~l~~~~~~~~~~~ 229 (334)
+...+.+.+..|.||..+ .+..+|.++.++ ...+.+.....+ ...+... ...+...++. +..+.+.
T Consensus 220 -~~~~~vDSis~s~HK~~g-~P~g~G~ll~r~-~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~--~G~~g~~ 294 (374)
T PLN03032 220 -TFRKPIGSVSVSGHKFLG-CPMPCGVALTRK-KHVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRR--KGYRGIK 294 (374)
T ss_pred -CCCcCCcEEEECcccccC-CCcCeEEEEEEc-hhhHhhccCCcccCCCCCcccCCCchHHHHHHHHHHHH--hCHHHHH
Confidence 111234456679999887 456689999854 444544332222 1122222 2222222222 1244567
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEE
Q 019899 230 TNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRC 309 (334)
Q Consensus 230 ~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi 309 (334)
++.++..++++++.+.|++.++++...+....+.+.-|. . .. +. .|-.+.+ ..+++|+
T Consensus 295 ~~~~~~~~~a~~l~~~l~~~~~~~~~~p~~~~V~f~~~~--~-------~~-----~~-~~w~l~~-------~~~~~hi 352 (374)
T PLN03032 295 RDVQHCMRNAHYLKDRLTEAGLTCRLNELSSTVVFERPM--D-------EA-----FI-KKWQLAC-------EGDIAHV 352 (374)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcEEECCCceEEEEcCCC--c-------Hh-----Hh-heeeecc-------cCCEEEE
Confidence 788888999999999999988886543333333344332 1 11 12 2443332 1247999
Q ss_pred EecC-CCcccHHHHHHHHHH
Q 019899 310 CFTS-LTHEDIPLVIERIQK 328 (334)
Q Consensus 310 ~~~~-~~~~~l~~~l~~l~~ 328 (334)
++.. .+.+.++++++.|++
T Consensus 353 ~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 353 VVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred EECCCCCHHHHHHHHHHHhc
Confidence 9886 688999999998875
No 264
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.85 E-value=1.6e-18 Score=150.85 Aligned_cols=279 Identities=17% Similarity=0.217 Sum_probs=183.2
Q ss_pred CCCcEEEecCcHHHHHHHHHHh-cCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 16 DPSQIVLTAGATPAVEILCFCL-ADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l-~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
...+.+.++++|.|+.+++.++ ..+||.|++|+.+|......+. ..|++++.+++++ +.+.+|.+.++++|++
T Consensus 48 G~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~TfvATan~i~-~~Ga~PVFvDid~-~T~nid~~~ie~aIt~---- 121 (374)
T COG0399 48 GVKYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTFVATANAVL-LVGAKPVFVDIDP-DTLNIDPDLIEAAITP---- 121 (374)
T ss_pred CCCeEEEecChHHHHHHHHHhcCCCCCCEEEecCCchHHHHHHHH-HcCCeEEEEecCC-cccCCCHHHHHHHccc----
Confidence 3678999999999999999977 5899999999999999999988 9999999999964 6678999999999997
Q ss_pred CCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccc-cCCCCcchhhhhhhccccCCCcEEEEecc-
Q 019899 95 GVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSI-FGNEEFVSMAEILEAEEVDKDRVHIIYGL- 172 (334)
Q Consensus 95 ~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~- 172 (334)
++|+|+.++- .|...+ +++|.++|++||++||+|.+++... |.|....++ + ++.+.||
T Consensus 122 --~tKAIipVhl---~G~~~d---m~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt~-----------G-d~~~fSF~ 181 (374)
T COG0399 122 --RTKAIIPVHL---AGQPCD---MDAIMALAKRHGLPVIEDAAQAHGATYKGKKVGSF-----------G-DIGAFSFH 181 (374)
T ss_pred --CCeEEEEehh---ccCCCC---HHHHHHHHHHcCCeEEEEcchhccCeecCcccccc-----------c-ceEEEEec
Confidence 7999998744 466677 9999999999999999999988754 444433232 1 2334455
Q ss_pred -cccCCCCCceEEEEeecCHHHHHHHHHhhcccC--------------CCh-HHHHHHHHhhCChHHHHHHHHHHHHHHH
Q 019899 173 -SKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCS--------------ISA-PTQRLLISMLSDTKFIQEYLETNKRRIK 236 (334)
Q Consensus 173 -sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~--------------~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 236 (334)
+|.++ .| -.|.+++.++++.++++.++..+. .|. +.-..++-.+...+.++++. ++=+
T Consensus 182 ~~K~it-tg-EGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl~QL~~l~~~~----~~R~ 255 (374)
T COG0399 182 ATKNLT-TG-EGGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGLAQLERLDEIN----ERRR 255 (374)
T ss_pred CCCCcc-cc-CceEEEeCCHHHHHHHHHHHHhCcCCCccccceeeecccccCHHHHHHHHHHHHHHHHHHHH----HHHH
Confidence 58886 55 679999989999988876543321 111 11111111111222223332 2233
Q ss_pred HHHHHHHHHHHhC-CCcccCCCce----eEE-eeecCCcCCCCChhhHHHHHHHHHHhcCeE----EcCCCCc-------
Q 019899 237 KLYDSFVAGLKQL-GIRCSESSAG----LYC-WADMSGLIPSYSEKGELELWDKLLNIAKIN----VTPGSAC------- 299 (334)
Q Consensus 237 ~~~~~~~~~l~~~-g~~~~~~~~g----~~~-~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~----v~~g~~~------- 299 (334)
+..++..+.|+++ ++.......+ +++ .+.+++. ......+... |++.||. ..|....
T Consensus 256 ~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~-----~~~R~~l~~~-L~~~gi~~~~~~~P~~~~~~~~~~~ 329 (374)
T COG0399 256 EIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEE-----GISRDALMES-LKEAGVGAVVYFRPLHLQPAYRQLG 329 (374)
T ss_pred HHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCC-----CCCHHHHHHH-HHhCCCCceEEeeccccchhhhccc
Confidence 3345555566655 2433322222 222 2344432 1233456666 7767554 4442221
Q ss_pred -CC--C-------CCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 300 -HC--I-------EPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 300 -~~--~-------~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
.. . ....+.+-+.. +++++++++++.|++++.+
T Consensus 330 ~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~~ 373 (374)
T COG0399 330 YFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLGS 373 (374)
T ss_pred ccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHHhcc
Confidence 00 0 01345555543 6999999999999999865
No 265
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.85 E-value=1.7e-19 Score=161.63 Aligned_cols=283 Identities=11% Similarity=0.039 Sum_probs=185.3
Q ss_pred hhhhcCCCCCC-CCcEEEec-CcHHHHHHHHHHhcCC-CCeEEecCCCCCChhhh-h-hhccCc-EEEEEeCCCCCCccc
Q 019899 6 SQVLGQAVSFD-PSQIVLTA-GATPAVEILCFCLADH-GNALLVPSPYYPGFDRD-I-RFRTGV-ELIPVHCRSTDNFAF 79 (334)
Q Consensus 6 ~~~~~~~~~~~-~~~i~~~~-g~~~~~~~~~~~l~~~-gd~vl~~~p~~~~~~~~-~-~~~~g~-~v~~v~~~~~~~~~~ 79 (334)
++.+.+.++.+ +++|++++ ++|.+++.++.+++++ ++.|+. +-.|+..... + + ..|. +++.++. +.+..+
T Consensus 54 r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~-~g~f~~~~~~~~~~-~~g~~~v~~~~~--~~g~~~ 129 (378)
T PRK03080 54 IEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLGARRVDHLA-WESFGSKWATDVVK-QLKLEDPRVLEA--DYGSLP 129 (378)
T ss_pred HHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCCCCcceEEE-eCHHHHHHHHHHHh-hcCCCCceEecc--CCCCCC
Confidence 44445556654 35799886 8999999999999874 444444 5566553332 3 3 5788 8888886 345567
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
|+++++ .+++|.+++.+|.||..+| +++|++ +++|+++++|.+++. |....++.
T Consensus 130 d~~~i~-----------~~~~V~~~h~~t~tG~~~p---i~~I~~--~~~g~~~vVDa~qs~----G~~pidv~------ 183 (378)
T PRK03080 130 DLSAVD-----------FDRDVVFTWNGTTTGVRVP---VARWIG--ADREGLTICDATSAA----FALPLDWS------ 183 (378)
T ss_pred CHhhcC-----------CCCCEEEEecCCccceecc---chhhcc--ccCCCeEEEeccccc----ccCCCCHH------
Confidence 766533 2456899999999999999 777777 789999999999875 33333443
Q ss_pred ccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh----------------------cccCCChHH---HHHH
Q 019899 160 EVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT----------------------RFCSISAPT---QRLL 214 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~----------------------~~~~~~~~~---~~~~ 214 (334)
+.++++.|.+|+++. ..++|+++. +++..+.+.... ...+.+++. ..++
T Consensus 184 ----~iD~~~~s~~K~l~~-P~G~g~l~v-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l 257 (378)
T PRK03080 184 ----KLDVYTFSWQKVLGG-EGGHGMAIL-SPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDY 257 (378)
T ss_pred ----HCcEEEEehhhhCCC-CCceEEEEE-CHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHH
Confidence 235888999999863 234899998 777766654311 011122233 3333
Q ss_pred HHhhCChHHHHH--HHHHHHHHHHHHHHHHHHHHHhCC-CcccCC----CceeEEeeecCCcCCCCChhhHHHHHHHHHH
Q 019899 215 ISMLSDTKFIQE--YLETNKRRIKKLYDSFVAGLKQLG-IRCSES----SAGLYCWADMSGLIPSYSEKGELELWDKLLN 287 (334)
Q Consensus 215 ~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~g-~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 287 (334)
.++++ ++.+ .++++.++.+++.+++.+.|++.+ +++..+ ..+..+.+.+|+.. .....++...+++
T Consensus 258 ~~al~---~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~----~~~~~~~~~~l~~ 330 (378)
T PRK03080 258 LDQLD---WANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDAQ----AAVDAAAVAKLLR 330 (378)
T ss_pred HHHHH---HHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCch----HHHHHHHHHHHHH
Confidence 33333 2333 357778888889999999998885 455421 12234445665410 0012356667565
Q ss_pred hcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHHcC
Q 019899 288 IAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAETCK 334 (334)
Q Consensus 288 ~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~~ 334 (334)
+||.+..|.... ..+.+|+|++. .+++|++++++.|++++++.+
T Consensus 331 -~~i~v~~g~~~~--~~~~vRis~~~~~t~~di~~l~~al~~~~~~~~ 375 (378)
T PRK03080 331 -ENGAVDIEPYRD--APNGLRIWCGPTVEPADVEALTPWLDWAFERLK 375 (378)
T ss_pred -cCCeeccccccC--CCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 588887765431 35789999885 699999999999999987653
No 266
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.85 E-value=3.7e-19 Score=161.84 Aligned_cols=288 Identities=15% Similarity=0.130 Sum_probs=179.3
Q ss_pred CCCcEEEecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChhhhhhhccCcE------------EE-----EEeCCCCCC
Q 019899 16 DPSQIVLTAGATPAVEILCFCLA--DHGNALLVPSPYYPGFDRDIRFRTGVE------------LI-----PVHCRSTDN 76 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~~g~~------------v~-----~v~~~~~~~ 76 (334)
..+.+++++++++|+..++.... ..+++|+..+++|+++...+....|.. .. .+.+ +
T Consensus 105 ~~~~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-- 180 (426)
T PRK00062 105 SIEMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTA--P-- 180 (426)
T ss_pred CCCEEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEc--C--
Confidence 35789999999999999988753 236789999999998753322111100 00 0111 0
Q ss_pred ccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCC-HHHHHHHHHHHHhcCcEEEEeccccccccCCCCc-chhhh
Q 019899 77 FAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIP-RETLYELLDFAREKNIHVISDEIYGGSIFGNEEF-VSMAE 154 (334)
Q Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~-~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~-~~~~~ 154 (334)
..|++.+++.++.. ..++.+|++......+|.+.+ .+.+++|.++|++||+++|+||+|.++.. +... .....
T Consensus 181 -~~d~~~l~~~i~~~---~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~-g~~~~~~~~~ 255 (426)
T PRK00062 181 -YNDLEAVEELFEEY---GDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRV-ALGGAQGYYG 255 (426)
T ss_pred -CCCHHHHHHHHHhC---CCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhcccc-CCccHHHHhC
Confidence 13788898888642 235666666644666888876 77899999999999999999999987733 3211 11111
Q ss_pred hhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh-----cccCCChHHHHHHHHhhCChHHHHHHHH
Q 019899 155 ILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT-----RFCSISAPTQRLLISMLSDTKFIQEYLE 229 (334)
Q Consensus 155 ~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 229 (334)
. .++ +.+++|.++ .|+++|++++ ++++.+.+.... ..++.+++.+.++.+.++..+. ++..+
T Consensus 256 ~------~pD----i~~~gK~l~-~G~p~ga~~~-~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~-~~~~~ 322 (426)
T PRK00062 256 V------TPD----LTTLGKIIG-GGLPVGAFGG-RREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKE-PGFYE 322 (426)
T ss_pred C------Ccc----hHhhhhHhh-CCCcceeeeE-HHHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhc-chHHH
Confidence 1 122 468999998 8999999988 788888885321 2346788888877777654221 11223
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCc-CCC------CChhhHHHHHHHHHHhcCeEEcCCCCcCCC
Q 019899 230 TNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGL-IPS------YSEKGELELWDKLLNIAKINVTPGSACHCI 302 (334)
Q Consensus 230 ~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~-~~~------~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~ 302 (334)
+.++.....++.+.+.+++.++.......|.++.+.+... ... ........+...++ ++||.+.|..
T Consensus 323 ~~~~~~~~~~~~l~~~~~~~~~~~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~-~~Gv~v~~~~----- 396 (426)
T PRK00062 323 ELEALTKRLAEGLKEAAKKAGIPLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAML-DEGVYLAPSQ----- 396 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceEEEEecceEEEEEecCCCcchhhhccccHHHHHHHHHHHH-HCCeEeecCC-----
Confidence 3333333333444444444565542222344444444321 110 01112245677755 5899997743
Q ss_pred CCCeEEEEecCCCcccHHHHHHHHHHHHHHc
Q 019899 303 EPGWFRCCFTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 303 ~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
.+.+++++. +++++++++++.+.++++++
T Consensus 397 -~~~~~~~~~-~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 397 -FEAGFVSAA-HTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred -cCceeeecc-CCHHHHHHHHHHHHHHHHhh
Confidence 124567654 79999999999999998764
No 267
>PLN02271 serine hydroxymethyltransferase
Probab=99.85 E-value=1.2e-18 Score=157.21 Aligned_cols=282 Identities=12% Similarity=0.055 Sum_probs=188.2
Q ss_pred CcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhh---------hhccCcEEEEEe--CCCCCCccccHHHHHH
Q 019899 18 SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDI---------RFRTGVELIPVH--CRSTDNFAFSITALDQ 86 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~---------~~~~g~~v~~v~--~~~~~~~~~~~~~l~~ 86 (334)
-+|-.- +++.|+.+++.++++|||+|+..+..|+++.... . ..|..+..++ ++ +....+|++++++
T Consensus 216 aNVQp~-SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs-~sG~~~~~vpY~~d-~~~g~IDyd~lek 292 (586)
T PLN02271 216 VNVQPY-SCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVS-GASIFFESLPYKVN-PQTGYIDYDKLEE 292 (586)
T ss_pred cceeec-cHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccc-cccceEEEEEcccc-cccCccCHHHHHH
Confidence 456666 5666999999999999999999888777665432 2 3454444444 43 2445799999999
Q ss_pred HHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcE
Q 019899 87 AFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRV 166 (334)
Q Consensus 87 ~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (334)
..... ++|+|++....+| ..+| ++++.++|+++|+++++|.+|......+..+.+.. ...+
T Consensus 293 ~a~~~-----rPKLII~g~Sayp--r~~D---~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~---------~~aD 353 (586)
T PLN02271 293 KALDF-----RPKILICGGSSYP--REWD---YARFRQIADKCGAVLMCDMAHISGLVAAKECVNPF---------DYCD 353 (586)
T ss_pred Hhhhc-----CCeEEEECchhcc--CcCC---HHHHHHHHHHcCCEEEEECcccccccccCcCCCCC---------cCCc
Confidence 55543 8998888777788 6788 88889999999999999999977544332221111 3456
Q ss_pred EEEecccccCCCCCceEEEEeecCH-------------------HHHHHHHHhhcc-cCCCh--HHHHHHHHhhCChHHH
Q 019899 167 HIIYGLSKDLSLPGFRTGVIYSYNE-------------------SVLAAAKKLTRF-CSISA--PTQRLLISMLSDTKFI 224 (334)
Q Consensus 167 ~~~~s~sK~~~~~g~r~g~i~~~~~-------------------~~~~~~~~~~~~-~~~~~--~~~~~~~~~l~~~~~~ 224 (334)
++.+|.+|++ .|.|.|.|++++. ++.+.+.+...+ +..++ ....+++..++.. .
T Consensus 354 vvt~TTHKtL--rGPrGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea--~ 429 (586)
T PLN02271 354 IVTSTTHKSL--RGPRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQV--A 429 (586)
T ss_pred EEEeCCcccC--CCCCceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHH--h
Confidence 8889999999 4556688887331 233444332222 22222 2334444444321 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCccc-CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCc---C
Q 019899 225 QEYLETNKRRIKKLYDSFVAGLKQLGIRCS-ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSAC---H 300 (334)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~---~ 300 (334)
...+.++.+++.++++.|.+.|.+.|+++. ....+..+++++..... +. ..+.++|++.||.+.-...+ .
T Consensus 430 ~~efk~Ya~QVv~NAkaLA~~L~~~G~~vv~ggTdnHlvLvDl~~~g~-----~G-~~ae~~Le~~~I~~Nkn~iP~d~~ 503 (586)
T PLN02271 430 TPEYKAYMQQVKKNAQALASALLRRKCRLVTGGTDNHLLLWDLTTLGL-----TG-KNYEKVCEMCHITLNKTAIFGDNG 503 (586)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHCCCeEeeCCCCcceeeecCcccCC-----CH-HHHHHHHHHcCeEeccccCCCCCC
Confidence 223478889999999999999999999976 44456777888865321 12 55566688899987532222 1
Q ss_pred CCCCCeEEEEecC-----CCcccHHHHHHHHHHHHH
Q 019899 301 CIEPGWFRCCFTS-----LTHEDIPLVIERIQKVAE 331 (334)
Q Consensus 301 ~~~~~~iRi~~~~-----~~~~~l~~~l~~l~~~~~ 331 (334)
+..++.+||+... ..++|++++.+.+.++++
T Consensus 504 ~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 504 TISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred CCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 2235679999653 357888888888777765
No 268
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.85 E-value=1.3e-19 Score=147.65 Aligned_cols=294 Identities=15% Similarity=0.151 Sum_probs=187.9
Q ss_pred hhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc-CCCCeEEecCCCCCChhhh--hhhccCcEEEEEeCCCCCCcccc
Q 019899 4 FMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLA-DHGNALLVPSPYYPGFDRD--IRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~-~~gd~vl~~~p~~~~~~~~--~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
.|..+.++.++ +...+++++|+. ++.++++.+| ++|..|++.+-+|-...+. +..+.|..+.++.- +++.-++
T Consensus 60 rLE~~vA~l~G-KEAgLFv~SGTm-gNllaIm~Hc~~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~--e~dgtm~ 135 (384)
T KOG1368|consen 60 RLEQRVAELFG-KEAGLFVPSGTM-GNLLAIMVHCHQRGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKN--ENDGTMD 135 (384)
T ss_pred HHHHHHHHHhC-ccceeeeccccc-ccHHHHHHHhcCCCceEEeccchheeehhccChhhhccceeEeeee--CCCCeee
Confidence 34444554443 333455555555 5656655555 5999999998887654432 22246777777664 5666899
Q ss_pred HHHHHHHHHHHH--HcCCceeEEEEeCCCCCcc-cCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhh
Q 019899 81 ITALDQAFNQAR--KRGVKVRGILICNPANPVG-NIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILE 157 (334)
Q Consensus 81 ~~~l~~~l~~~~--~~~~~~~~i~~~~p~nptG-~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~ 157 (334)
+++++++++... -+...+++|.+.|.+|.+| .++|.+++.++.++|++||+.++.|.+-- |.-.-...++...+..
T Consensus 136 ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi-~NAavasgV~vk~i~~ 214 (384)
T KOG1368|consen 136 LEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARI-FNAAVASGVPVKKICS 214 (384)
T ss_pred HHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhh-hhHHHHcCCCHHHHHH
Confidence 999999998543 2567899999999966555 99999999999999999999999998722 1111112345555554
Q ss_pred ccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccC--CChHHHHHHHHhhCChHHHHHHHHHHHHHH
Q 019899 158 AEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCS--ISAPTQRLLISMLSDTKFIQEYLETNKRRI 235 (334)
Q Consensus 158 ~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 235 (334)
. .+. +--++||.+|.| +|.++..+.+++++.+.++...+ .-.....+++.+....+ .... ...-
T Consensus 215 ~----fDS--VsiCLSKglgAP---VGSViVG~k~FI~kA~~~RKalGGGmRQsGvLaaaaLval~~----~~~~-L~~d 280 (384)
T KOG1368|consen 215 A----FDS--VSICLSKGLGAP---VGSVIVGSKDFIDKARHFRKALGGGMRQSGVLAAAALVALDE----NVPL-LRAD 280 (384)
T ss_pred h----hhh--hhhhhhccCCCC---cccEEEccHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhhc----chHH-HHHH
Confidence 1 222 223799999855 78877779999998887654432 22222333333332211 1122 2233
Q ss_pred HHHHHHHHHHHHhCC-CcccCC--CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEec
Q 019899 236 KKLYDSFVAGLKQLG-IRCSES--SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFT 312 (334)
Q Consensus 236 ~~~~~~~~~~l~~~g-~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~ 312 (334)
.+++..+.+.++..+ +++-.+ +.++. .+.+-.. ..+..++++. ++++||.+.++.. ..+|+.+.
T Consensus 281 Hk~A~~lAe~~~~~~~i~v~v~a~etNiv-~~~l~q~-----~~~~~~l~~~-~~k~gi~lm~~~s------~r~Rivlh 347 (384)
T KOG1368|consen 281 HKRAKELAEYINTPEEIRVEVPAVETNIV-NMVLCQA-----RLTAEELCKF-LEKNGILLMGGAS------RRIRIVLH 347 (384)
T ss_pred HHHHHHHHHHhccccceeeecchhhccee-eeecccc-----cCCHHHHHHH-HHHCCeEEeeccc------cceEEEEE
Confidence 455566666666653 554333 44443 3333221 1345788888 5669999988763 45899998
Q ss_pred C-CCcccHHHHHHHHHHH
Q 019899 313 S-LTHEDIPLVIERIQKV 329 (334)
Q Consensus 313 ~-~~~~~l~~~l~~l~~~ 329 (334)
+ +++++++.++..+++.
T Consensus 348 ~Qvt~~~ve~~~~~~~k~ 365 (384)
T KOG1368|consen 348 HQVTDEDVEYVKSVLSKK 365 (384)
T ss_pred EecCHHHHHHHHHHHHHH
Confidence 6 7999999999999443
No 269
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.85 E-value=3.8e-19 Score=157.10 Aligned_cols=279 Identities=11% Similarity=0.099 Sum_probs=191.1
Q ss_pred hhhcCCCCC-CCCcEEEecC-cHHHHHHHHHHhcCCCCeEEecCCCCCC--hhhhhhhccCcEEEEEeCCC--CCCcccc
Q 019899 7 QVLGQAVSF-DPSQIVLTAG-ATPAVEILCFCLADHGNALLVPSPYYPG--FDRDIRFRTGVELIPVHCRS--TDNFAFS 80 (334)
Q Consensus 7 ~~~~~~~~~-~~~~i~~~~g-~~~~~~~~~~~l~~~gd~vl~~~p~~~~--~~~~~~~~~g~~v~~v~~~~--~~~~~~~ 80 (334)
+.+.+.++. +..+|++++| +|.++++++.++..+||++++..-..++ +.+.++ ..|. ++.+...+ +.+..++
T Consensus 44 ~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~~~l~i~~G~fg~r~~~~a~-~~g~-~~~~~~~~~~~~~~~~~ 121 (349)
T TIGR01364 44 SDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEGKVADYIVTGAWSKKAAKEAK-KYGV-VNVVASGKEGNYTKIPD 121 (349)
T ss_pred HHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHH-HhCC-cEEEeccccCCCCCCCC
Confidence 334444544 3347888877 9999999999999899998877655443 333455 6788 76666432 2344566
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
+++++. + .++++|.+++..|.||+..+ ++++.+++++++|.+.+. +.....+..
T Consensus 122 ~~~~~~--~------~~~~~v~~th~ETstGv~~~--------~l~~~~~~l~iVDavss~----g~~~id~~~------ 175 (349)
T TIGR01364 122 PSTWEI--S------EDAAYVHYCANETIHGVEFR--------ELPDVKNAPLVADMSSNI----LSRPIDVSK------ 175 (349)
T ss_pred HHhcCC--C------CCCCEEEEcCCCCcccEecc--------eecccCCCeEEEEccccc----cCccCCHHH------
Confidence 666552 2 27899999999999999876 556668999999999875 333444432
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh--------------hcccCCChHHHHHHHHhhCChHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL--------------TRFCSISAPTQRLLISMLSDTKFIQE 226 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~l~~~~~~~~ 226 (334)
.+ +++.|.+|.+|++| +|.++. ++++.+++... ..+++++....+++.++++... +.
T Consensus 176 --~d--~~~~ssqK~lgP~G--lg~l~~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~--~~ 246 (349)
T TIGR01364 176 --FG--LIYAGAQKNIGPAG--LTVVIV-RKDLLGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLK--EQ 246 (349)
T ss_pred --cc--EEEEecccccCCCc--eEEEEE-CHHHHhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHH--Hc
Confidence 33 78889999998666 788888 67666554211 1123556666666666664321 33
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHhC-CCcccC-C---CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcC
Q 019899 227 -YLETNKRRIKKLYDSFVAGLKQL-GIRCSE-S---SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACH 300 (334)
Q Consensus 227 -~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~-~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~ 300 (334)
.++++.++.++..+++.+.|+++ |+.... + ..+..+.+.+++. ....++... +.++|+.+.+|..
T Consensus 247 gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~------~~~~~~~~~-~~~~Gi~~~~~~~-- 317 (349)
T TIGR01364 247 GGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNE------ELEKRFLKE-AEERGLVSLKGHR-- 317 (349)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCCh------hHhHHHHHH-HHHCCCcccCCcc--
Confidence 37888999999999999999999 564432 1 2223455565542 112345455 5668997777764
Q ss_pred CCCCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 301 CIEPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 301 ~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
..+.+|+|+.. .+++|++.+++.|++++++|
T Consensus 318 --~~g~vRvS~~~~nt~edid~l~~al~~~~~~~ 349 (349)
T TIGR01364 318 --SVGGMRASIYNAMPLEGVQALVDFMKEFQKKH 349 (349)
T ss_pred --ccCeeEEECcCCCCHHHHHHHHHHHHHHHHhC
Confidence 23589999885 69999999999999998875
No 270
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.85 E-value=1.1e-18 Score=159.37 Aligned_cols=285 Identities=12% Similarity=0.071 Sum_probs=178.7
Q ss_pred CCCCCCcEEE---ecCcHHHHHHHHHHhcCCCCeEEecCC---CCCC---hhhhhhhccCcEEE----EEeCCCCCCccc
Q 019899 13 VSFDPSQIVL---TAGATPAVEILCFCLADHGNALLVPSP---YYPG---FDRDIRFRTGVELI----PVHCRSTDNFAF 79 (334)
Q Consensus 13 ~~~~~~~i~~---~~g~~~~~~~~~~~l~~~gd~vl~~~p---~~~~---~~~~~~~~~g~~v~----~v~~~~~~~~~~ 79 (334)
++...+.+.+ ..+++.|+..++.+++++||+|+..+. .|.+ .....+ ..+..+. .++.+ .++..+
T Consensus 93 f~~~~~~~~~nv~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~-~s~~~~~~~~~~y~~~-~~~g~i 170 (475)
T PLN03226 93 FRLDPEKWGVNVQPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKK-ISATSIYFESMPYRLD-ESTGLI 170 (475)
T ss_pred hCCCcceeEEecCcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccc-cccceEEEEeeeeeec-CCCCCc
Confidence 4445554433 367788999999999999999998553 2222 222222 2222222 33333 245679
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
|++++++.+++. ++++|++. .+ .+|+..| +++|.++|+++|+++++|++|.....+.....+. +
T Consensus 171 D~d~Le~~l~~~-----~pklIv~~-~S-~~s~~~D---~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p--~---- 234 (475)
T PLN03226 171 DYDKLEKKAMLF-----RPKLIIAG-AS-AYPRDWD---YARMRKIADKVGALLMCDMAHISGLVAAQEAASP--F---- 234 (475)
T ss_pred CHHHHHHHHhhc-----CCeEEEEe-cC-cCCCccC---HHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCC--C----
Confidence 999999998763 67755553 33 3678888 8888999999999999999998755433221111 1
Q ss_pred ccCCCcEEEEecccccC-CCCCceEEEEeecCHHHH-----------HH---HHHhhc-cc--CCChHHHHHHHHhhCCh
Q 019899 160 EVDKDRVHIIYGLSKDL-SLPGFRTGVIYSYNESVL-----------AA---AKKLTR-FC--SISAPTQRLLISMLSDT 221 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~-~~~g~r~g~i~~~~~~~~-----------~~---~~~~~~-~~--~~~~~~~~~~~~~l~~~ 221 (334)
...+++++|++|++ |.. .|++++ +++++ +. +..... .+ +.+.....++..+++..
T Consensus 235 ---~~~Div~~t~hK~L~GP~---Gg~I~~-~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i 307 (475)
T PLN03226 235 ---EYCDVVTTTTHKSLRGPR---GGMIFF-RKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQA 307 (475)
T ss_pred ---CCCeEEEecCcccccCCC---ceEEEE-chhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHH
Confidence 34568899999999 433 488887 55433 22 111111 12 22333333344444321
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC-CceeEEeeecCC-cCCCCChhhHHHHHHHHHHhcCeEEcCCCCc
Q 019899 222 KFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSES-SAGLYCWADMSG-LIPSYSEKGELELWDKLLNIAKINVTPGSAC 299 (334)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~ 299 (334)
......++++++.++.+++.+.|.+.|+++..+ .....+++++.. .++ +.++... |++.||.+..+...
T Consensus 308 --~~~~~~~~~~~~~~na~~L~~~L~~~G~~l~~~~t~~hi~lv~~~~~gi~------~~~~~~~-L~~~~I~~nk~~~p 378 (475)
T PLN03226 308 --MTPEFKAYQKQVKANAAALANRLMSKGYKLVTGGTDNHLVLWDLRPLGLT------GSRVEKV-LDLAHITLNKNAVP 378 (475)
T ss_pred --hCcCHHHHHHHHHHHHHHHHHHHHhCCCEEEcCCCCCCEEEEEccCCCCC------HHHHHHH-HHHCCCEECCCCCC
Confidence 112235678899999999999999999998753 224556677743 222 2345555 77799998765422
Q ss_pred C---CCCCCeEEEEecC-----CCcccHHHHHHHHHHHHH
Q 019899 300 H---CIEPGWFRCCFTS-----LTHEDIPLVIERIQKVAE 331 (334)
Q Consensus 300 ~---~~~~~~iRi~~~~-----~~~~~l~~~l~~l~~~~~ 331 (334)
+ +-.+..+|++... .+++|++++.+.|.++++
T Consensus 379 ~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~ 418 (475)
T PLN03226 379 GDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVT 418 (475)
T ss_pred CCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence 1 1234668986431 578899999999998886
No 271
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.85 E-value=3e-18 Score=150.13 Aligned_cols=273 Identities=17% Similarity=0.172 Sum_probs=185.0
Q ss_pred CCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhh---ccCcEEEEEeCCCCCCccccHHHHHHHHHHHH
Q 019899 16 DPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRF---RTGVELIPVHCRSTDNFAFSITALDQAFNQAR 92 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~---~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~ 92 (334)
..++.+.++++..|+..++.+++++||+|+++...|++..+.+.. ..|.++.+++. .+.+++++++.+
T Consensus 77 g~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~-------~~~~~~~~~~~~-- 147 (396)
T COG0626 77 GGEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDP-------GDDEALEAAIKE-- 147 (396)
T ss_pred CCCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECC-------CChHHHHHHhcc--
Confidence 467899999999999999999999999999999999998776552 36888887773 244566666653
Q ss_pred HcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEecc
Q 019899 93 KRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGL 172 (334)
Q Consensus 93 ~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 172 (334)
.++++|++.+|+||+..+.| +++|.++|+++|+.+++|+.|..- ....++. .+.+++++|.
T Consensus 148 ---~~tk~v~lEtPsNP~l~v~D---I~~i~~~A~~~g~~vvVDNTfatP-------~~q~PL~------~GaDIVvhSa 208 (396)
T COG0626 148 ---PNTKLVFLETPSNPLLEVPD---IPAIARLAKAYGALVVVDNTFATP-------VLQRPLE------LGADIVVHSA 208 (396)
T ss_pred ---cCceEEEEeCCCCccccccc---HHHHHHHHHhcCCEEEEECCcccc-------cccChhh------cCCCEEEEec
Confidence 27999999999999999999 999999999999999999998742 2222221 6788999999
Q ss_pred cccCCCC-CceEEEEeecCHHHHHHHHHhhc--cc-CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 019899 173 SKDLSLP-GFRTGVIYSYNESVLAAAKKLTR--FC-SISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQ 248 (334)
Q Consensus 173 sK~~~~~-g~r~g~i~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 248 (334)
+|.++.. .+=.|.++++++.+.+.+..... .+ ..++...+.+.+-++.. .-+.++..+++..+.+.|++
T Consensus 209 TKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlkTL-------~~Rm~~~~~nA~~IA~~L~~ 281 (396)
T COG0626 209 TKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGAVLSPFDAWLLLRGLRTL-------ALRMERHNENALKIAEFLAD 281 (396)
T ss_pred cccccCCcceeeeEEecChHHHHHHHHHHHHhhcCCCCCHHHHHHHHhccchH-------HHHHHHHHHHHHHHHHHHhc
Confidence 9999533 45556666667777776643322 22 33444444444444442 33455667778888888877
Q ss_pred C-CCc-ccCC----------------CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCC---------
Q 019899 249 L-GIR-CSES----------------SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHC--------- 301 (334)
Q Consensus 249 ~-g~~-~~~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--------- 301 (334)
+ .++ +.-| ..|-.+.+++... +....+.+. ++-..+...-|.....
T Consensus 282 ~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~------~~~~~f~~~-L~l~~~a~SlGgveSLi~~pa~~th 354 (396)
T COG0626 282 HPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNE------EAAKKFLDS-LKLFKLAESLGGVESLISHPATMTH 354 (396)
T ss_pred CCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCCh------HHHHHHHHh-CCccEEeccCCCcccccccccccCc
Confidence 5 222 1111 1233344666542 122334444 3333333333332110
Q ss_pred ------------CCCCeEEEEecCCCcccHHHHHHHHHHHHHHc
Q 019899 302 ------------IEPGWFRCCFTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 302 ------------~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
..++-+|+|++ -|+++.+++.|.+++++.
T Consensus 355 ~~~~~~~r~~~Gi~~~LvRlSVG---lEd~eDLi~Dl~~Al~~~ 395 (396)
T COG0626 355 ASIPLEERAKAGITDGLVRLSVG---LEDVEDLIADLEQALAKA 395 (396)
T ss_pred ccCCHhHHHhcCCCCCeEEEEec---CCCHHHHHHHHHHHHHhh
Confidence 02357999999 888899999999998764
No 272
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.84 E-value=3.9e-18 Score=151.52 Aligned_cols=302 Identities=14% Similarity=0.127 Sum_probs=202.9
Q ss_pred CCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhh-hhhccCcEEEEEeC--------CCCCCccccHHHHHHH
Q 019899 17 PSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRD-IRFRTGVELIPVHC--------RSTDNFAFSITALDQA 87 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~-~~~~~g~~v~~v~~--------~~~~~~~~~~~~l~~~ 87 (334)
.+.++.++++|.|+++++...+++||.| +...|...... +. ..|..++-+.. ..+..+.+|++.++++
T Consensus 93 ~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~-~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~ 169 (460)
T PRK13237 93 FKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQE-LNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQAL 169 (460)
T ss_pred CCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHH-hCCcEEEeeecccccccccCCCCCCCcCHHHHHHH
Confidence 4569999999999999877778999964 55545544444 55 67775444421 1235678999999999
Q ss_pred HHHHHHcCCceeEEEEeCCCCCc-ccCCCHHHHHHHHHHHHhcCcEEEEeccccccc-c------CCCCcchhhhhhhcc
Q 019899 88 FNQARKRGVKVRGILICNPANPV-GNIIPRETLYELLDFAREKNIHVISDEIYGGSI-F------GNEEFVSMAEILEAE 159 (334)
Q Consensus 88 l~~~~~~~~~~~~i~~~~p~npt-G~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~-~------~~~~~~~~~~~~~~~ 159 (334)
|++.. ..++.++.+++++|.. |+.+|.++++++.++|++||+.||+|.+..... + .+....++.+...+
T Consensus 170 I~~~~--~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e- 246 (460)
T PRK13237 170 IDEVG--AENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHE- 246 (460)
T ss_pred hcccc--CCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhhhcccccccCCCcHhHHhhh-
Confidence 98531 1245567777788877 799999999999999999999999999975421 0 11111232222111
Q ss_pred ccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc-------ccCCChHHHHHHHHhhCChHHHHHHHHHHH
Q 019899 160 EVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR-------FCSISAPTQRLLISMLSDTKFIQEYLETNK 232 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 232 (334)
+-.-.+..+.|++|.++.+ . .|+++++++++.++++...- +++.+..-..+++..+.+.-. .+++.
T Consensus 247 -~~s~aD~~t~S~~K~~~~~-~-GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~alAvgl~E~~~-~~y~~--- 319 (460)
T PRK13237 247 -MFSYADGCTMSGKKDCLVN-I-GGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDMEAMAIGIEESVQ-YEYIE--- 319 (460)
T ss_pred -ccCcCcEEEEeCCCCCCCC-C-ceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHHHHHhHHHhhch-HHHHH---
Confidence 1123345566899999754 2 48888889999999887632 223334445555554443211 23333
Q ss_pred HHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCC--CCChhhHHHHHHHHHHhcCeEEc-CCCC-cCCC----C-
Q 019899 233 RRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIP--SYSEKGELELWDKLLNIAKINVT-PGSA-CHCI----E- 303 (334)
Q Consensus 233 ~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~gi~v~-~g~~-~~~~----~- 303 (334)
.--.+.++|.+.|.+.|+++..|.+|.-++++..+... ......+..++.+|..+.||.-. -|+. ++-. .
T Consensus 320 -~ri~~~~~l~~~L~~~Gvpv~~p~ggH~v~vda~~~lph~~~~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~ 398 (460)
T PRK13237 320 -HRVGQVRYLGEKLLAAGVPIVEPVGGHAVFLDARRFLPHLPQDQFPAQALAAELYIESGVRSMERGIVSAGRDPKTGEN 398 (460)
T ss_pred -HHHHHHHHHHHHHHHCCCceecCCCceEEEEEhHHhCCCCCcccChHHHHHHHHHHHhCcCeEeecceecccCCCCCcc
Confidence 33345689999999999999999999999887654322 12345677899999999999643 2332 1111 1
Q ss_pred ----CCeEEEEecC--CCcccHHHHHHHHHHHHHH
Q 019899 304 ----PGWFRCCFTS--LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 304 ----~~~iRi~~~~--~~~~~l~~~l~~l~~~~~~ 332 (334)
-.-+|+.+.. .|.+.++.+.+.+..+.++
T Consensus 399 ~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 433 (460)
T PRK13237 399 HYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKH 433 (460)
T ss_pred CCCccceeeeccccccccHHHHHHHHHHHHHHHHh
Confidence 1468999985 5999999999999988765
No 273
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.84 E-value=1.8e-18 Score=157.09 Aligned_cols=167 Identities=14% Similarity=0.220 Sum_probs=126.6
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHh---------cCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCC
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCL---------ADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTD 75 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l---------~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~ 75 (334)
+++.++..++. +++++++|+++++..++.++ +++||+|+++.++|..+...+. ..|.+++.++++. .
T Consensus 68 fe~~lA~~~g~--~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~-~~G~~pv~vdvd~-~ 143 (438)
T PRK15407 68 FEKKLAEFLGV--RYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPII-QNGLVPVFVDVEL-P 143 (438)
T ss_pred HHHHHHHHhCC--CeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHH-HcCCEEEEEecCC-C
Confidence 44455554443 47999999999999998876 3789999999999999999888 8999999999853 4
Q ss_pred CccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccc-cCCCCcchhhh
Q 019899 76 NFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSI-FGNEEFVSMAE 154 (334)
Q Consensus 76 ~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~-~~~~~~~~~~~ 154 (334)
.+.+|++.+++++++ ++++|+++++ +|...+ +++|.++|+++|++||+|++|+... +.+....+
T Consensus 144 ~~~id~~~le~~i~~------~tkaVi~~~~---~G~p~d---l~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~--- 208 (438)
T PRK15407 144 TYNIDASLLEAAVSP------KTKAIMIAHT---LGNPFD---LAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGT--- 208 (438)
T ss_pred cCCcCHHHHHHHcCc------CCeEEEEeCC---CCChhh---HHHHHHHHHHCCCEEEEECccchhhhcCCeeeec---
Confidence 678999999999876 7898988864 555555 8999999999999999999998643 32221111
Q ss_pred hhhccccCCCcEEEEeccc--ccCCCCCceEEEEeecCHHHHHHHHHhh
Q 019899 155 ILEAEEVDKDRVHIIYGLS--KDLSLPGFRTGVIYSYNESVLAAAKKLT 201 (334)
Q Consensus 155 ~~~~~~~~~~~~~~~~s~s--K~~~~~g~r~g~i~~~~~~~~~~~~~~~ 201 (334)
.+ ++.+.||+ |.+. .|- .|+++++++++.+.++.+.
T Consensus 209 --------~g-d~~~fSf~~~k~~~-~ge-GG~l~t~d~~l~~~~~~~~ 246 (438)
T PRK15407 209 --------FG-DIATLSFYPAHHIT-MGE-GGAVFTNDPLLKKIIESFR 246 (438)
T ss_pred --------cC-ceEEEeCCCCCCcc-ccC-ceEEEECCHHHHHHHHHHH
Confidence 22 24455654 6664 343 5999998888888776554
No 274
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.84 E-value=4.6e-18 Score=153.71 Aligned_cols=153 Identities=16% Similarity=0.190 Sum_probs=116.5
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhh----hhhhccCcEEEEEeCCCCCCcccc
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDR----DIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
+++.++...+. +..++++++++|+.+++.++.++||+|+++...|.+... .+. ..|.+++.++. . .|
T Consensus 74 le~~la~l~g~--~~~v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~-~~Gi~v~~vd~--~----~d 144 (437)
T PRK05613 74 LENRIASLEGG--VHAVAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLN-RLGIEVTFVEN--P----DD 144 (437)
T ss_pred HHHHHHHHhCC--CeEEEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHH-hcCeEEEEECC--C----CC
Confidence 44555544443 456666666688888888889999999999999998753 334 67999999872 1 27
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++ ++++|++.++.||+|.+.| +++|.++|+++|+++++|.+++... ...++ .
T Consensus 145 ~e~l~~~l~~------~tk~V~~e~~~Np~~~v~d---i~~I~~la~~~gi~livD~t~a~g~----~~~p~----~--- 204 (437)
T PRK05613 145 PESWQAAVQP------NTKAFFGETFANPQADVLD---IPAVAEVAHRNQVPLIVDNTIATAA----LVRPL----E--- 204 (437)
T ss_pred HHHHHHhCCc------cCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCeEEEECCCcccc----ccChH----H---
Confidence 8999999986 7899999999999999999 9999999999999999999976411 11111 1
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEee
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYS 188 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~ 188 (334)
.+.++++.|++|.++..|..+|.+++
T Consensus 205 --~GaDivv~S~~K~l~G~gd~~gG~vv 230 (437)
T PRK05613 205 --LGADVVVASLTKFYTGNGSGLGGVLI 230 (437)
T ss_pred --hCCCEEEeeccceecCCCcceeEEEE
Confidence 56789999999999766655555444
No 275
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.84 E-value=2.9e-18 Score=156.10 Aligned_cols=288 Identities=15% Similarity=0.102 Sum_probs=181.2
Q ss_pred CCCcEEEecCcHHHHHHHHHHhc--------CCCCeEEecCCCCCChhhhhhhccCc------------EEEEEeCCCCC
Q 019899 16 DPSQIVLTAGATPAVEILCFCLA--------DHGNALLVPSPYYPGFDRDIRFRTGV------------ELIPVHCRSTD 75 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l~--------~~gd~vl~~~p~~~~~~~~~~~~~g~------------~v~~v~~~~~~ 75 (334)
..+.+++++++++|+..++.... ....+|+....+|.+......-..+. .+..++.+..+
T Consensus 101 ~~~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d 180 (423)
T PRK05964 101 GLDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDG 180 (423)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcch
Confidence 35689999999999999887642 12457888888887754332201111 12334432211
Q ss_pred CccccHHHHHHHHHHHHHcCCceeEEEEeC-CCCCcccCC-CHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhh
Q 019899 76 NFAFSITALDQAFNQARKRGVKVRGILICN-PANPVGNII-PRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMA 153 (334)
Q Consensus 76 ~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~-p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~ 153 (334)
....+++.+++.+++. ..++.+|++.. .++..|... |.+.++++.++|++||+++|+||++.++...|..+..
T Consensus 181 ~~~~~~~~l~~~l~~~---~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~-- 255 (423)
T PRK05964 181 YEQATLDALEALLEKH---AGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFAC-- 255 (423)
T ss_pred hHHHHHHHHHHHHHhC---CCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHH--
Confidence 1122377777777532 23566666654 367778766 8889999999999999999999999876554432211
Q ss_pred hhhhccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHHh--------hcccCCChHHHHHHHHhhCChHHH
Q 019899 154 EILEAEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKKL--------TRFCSISAPTQRLLISMLSDTKFI 224 (334)
Q Consensus 154 ~~~~~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~~ 224 (334)
+. .+....+.+++|+++ .| +++|++++ ++++.+.+... ...++.+++...++.+.++..+
T Consensus 256 ~~-------~~v~pDi~~~~K~l~-gG~~p~~av~~-~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~-- 324 (423)
T PRK05964 256 EQ-------AGVSPDIMCLSKGLT-GGYLPLAATLC-TAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFE-- 324 (423)
T ss_pred Hh-------cCCCCCeeeeehhhh-cCcccceEEEE-cHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHH--
Confidence 11 111122347889997 55 89999998 88998887531 2234567777777777665322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CCcccC--CCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCC
Q 019899 225 QEYLETNKRRIKKLYDSFVAGLKQL-GIRCSE--SSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHC 301 (334)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~ 301 (334)
+ ....+++.++.+++.+.|++. ...... ..-|.++.+.+..... ......+...|+ ++||.+.+..
T Consensus 325 ~---~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~~~~~---~~~~~~l~~~l~-~~Gv~v~~~~---- 393 (423)
T PRK05964 325 D---EPVLERVAALSAGLAEGLEPFRDLPGVADVRVLGAIGAVELDRPVL---ERDGPALRAFAL-ERGVLLRPLG---- 393 (423)
T ss_pred h---cCHHHHHHHHHHHHHHHHHhhccCCCeEEeecccEEEEEEeccCcc---hhHHHHHHHHHH-HCCeEEEecC----
Confidence 1 123445555566666666554 222211 1235555566653211 012346777744 5899987631
Q ss_pred CCCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 302 IEPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 302 ~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
+.+|++.+. .+++|++++++++.++++++
T Consensus 394 ---~~lR~~p~l~~t~edId~~v~~l~~al~~~ 423 (423)
T PRK05964 394 ---NTIYLMPPYIITAEELDRITDAIVEVADEL 423 (423)
T ss_pred ---CEEEEeCCcccCHHHHHHHHHHHHHHHhhC
Confidence 469999875 69999999999999998763
No 276
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.84 E-value=8.8e-18 Score=137.88 Aligned_cols=281 Identities=17% Similarity=0.142 Sum_probs=205.8
Q ss_pred cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCC--hhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCC
Q 019899 19 QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPG--FDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGV 96 (334)
Q Consensus 19 ~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~--~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~ 96 (334)
-.++..+++.++.+++-.++.|||+|++-...-++ ..+..+ ++|++|..|+. +.+...++|++.+.+..+
T Consensus 70 tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~ra~D~~~-r~ga~V~~v~~--~~G~~~~le~i~~~lsqh----- 141 (385)
T KOG2862|consen 70 TFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQRAADCAR-RYGAEVDVVEA--DIGQAVPLEEITEKLSQH----- 141 (385)
T ss_pred eEEEecCCcchHHHHHHhhcCCCCeEEEEEechHHHHHHHHHH-hhCceeeEEec--CcccCccHHHHHHHHHhc-----
Confidence 35556667899999999999999999887654333 344566 89999999976 678899999999999986
Q ss_pred ceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEecccccC
Q 019899 97 KVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDL 176 (334)
Q Consensus 97 ~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~ 176 (334)
+++++++++..+.||++.| -+....++|++|+.+++||.+.+. ++.++ .++. ++.++..+..-|++
T Consensus 142 ~p~~vfv~hgdsSTgV~q~--~~~~~g~lc~k~~~lllVD~VaSl---ggt~F----~mDe-----wgVDvaytgSQKaL 207 (385)
T KOG2862|consen 142 KPKAVFVTHGDSSTGVLQD--LLAISGELCHKHEALLLVDTVASL---GGTEF----EMDE-----WGVDVAYTGSQKAL 207 (385)
T ss_pred CCceEEEEecCccccccch--HHHHHHHHhhcCCeEEEEechhhc---CCccc----eehh-----hcccEEEecchhhc
Confidence 9999999999999999977 244556788999999999999764 22221 2222 77777777777999
Q ss_pred CCCCceEEEEeecCHHHHHHHHHhhc--------------c-----------cCCChHHHHHHHHhhCChHHHHHHHHHH
Q 019899 177 SLPGFRTGVIYSYNESVLAAAKKLTR--------------F-----------CSISAPTQRLLISMLSDTKFIQEYLETN 231 (334)
Q Consensus 177 ~~~g~r~g~i~~~~~~~~~~~~~~~~--------------~-----------~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 231 (334)
+.| ..++.+.. ++...++++..++ + .+.+....+.+.++|.. ..++-+++.
T Consensus 208 ~aP-~GLsiisf-S~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~--I~eeGL~~~ 283 (385)
T KOG2862|consen 208 GAP-AGLSIISF-SDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALAL--IAEEGLENS 283 (385)
T ss_pred CCC-CCcceeec-CHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHH--HHHHHHHHH
Confidence 744 23555665 6666666654322 1 12344555666666654 346778889
Q ss_pred HHHHHHHHHHHHHHHHhCCCcccC----CCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeE
Q 019899 232 KRRIKKLYDSFVAGLKQLGIRCSE----SSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWF 307 (334)
Q Consensus 232 ~~~~~~~~~~~~~~l~~~g~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~i 307 (334)
.++++++.++++..|+..|++... ....-...+.+|...+ -.+++.++...+++.+..|. +...+.++
T Consensus 284 ~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvttv~vp~gvD------w~dVv~~~~~~~~vei~ggl--g~~~gKv~ 355 (385)
T KOG2862|consen 284 WRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVTTVKVPYGVD------WKDVVAYAMSHYVVEIGGGL--GPTVGKVF 355 (385)
T ss_pred HHHHHHHHHHHHHHHHHhCccceecChhhccCcceeeecCCCCC------HHHHHHHHHHhcCEEecccc--CCCcccEE
Confidence 999999999999999999887542 1223334566776554 37889998887788886544 33456799
Q ss_pred EEEec-C-CCcccHHHHHHHHHHHHHHc
Q 019899 308 RCCFT-S-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 308 Ri~~~-~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
||++. . -+.+.++..++.|+..+.+.
T Consensus 356 RIGl~gcna~~e~i~~v~~ll~~alq~~ 383 (385)
T KOG2862|consen 356 RIGLLGCNANVEYIDNVVELLKLALQRK 383 (385)
T ss_pred EEEEeeccCCcHHHHHHHHHHHHHHhhc
Confidence 99965 3 48899999999999988764
No 277
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.83 E-value=6.2e-18 Score=149.91 Aligned_cols=296 Identities=13% Similarity=0.102 Sum_probs=196.7
Q ss_pred CCCcEEEecCcHHHHHHHHHHh--cCCCCeEEecCCCCCChh-hhhhhccC-------------cEEEEEeCCCCCC--c
Q 019899 16 DPSQIVLTAGATPAVEILCFCL--ADHGNALLVPSPYYPGFD-RDIRFRTG-------------VELIPVHCRSTDN--F 77 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l--~~~gd~vl~~~p~~~~~~-~~~~~~~g-------------~~v~~v~~~~~~~--~ 77 (334)
....+++++++++|+..++... ...+..|+....+|.+.. ..+. +.| ..++.+|.++... +
T Consensus 116 ~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~gals-lT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~ 194 (447)
T COG0160 116 GLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALS-LTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPF 194 (447)
T ss_pred cCCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHH-hccCccccccCCCCCCCCeEEecCCccccCcc
Confidence 4567999999999999998765 233456777777776532 2232 211 2356666532211 1
Q ss_pred --------cccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHH-HHHHHHHHHHhcCcEEEEeccccccccCCCC
Q 019899 78 --------AFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRE-TLYELLDFAREKNIHVISDEIYGGSIFGNEE 148 (334)
Q Consensus 78 --------~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~-~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~ 148 (334)
.-..+.+++.+.+......++.++++..-+...|.+.+.+ -++++.++|++||+++|+||++.++..+|+-
T Consensus 195 ~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~ 274 (447)
T COG0160 195 GIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKM 274 (447)
T ss_pred cCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccc
Confidence 1234455665665555555677777776688999977655 5999999999999999999999998877632
Q ss_pred cchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHH-HhhcccCCChHHHHHHHHhhCChHHHHHH
Q 019899 149 FVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAK-KLTRFCSISAPTQRLLISMLSDTKFIQEY 227 (334)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 227 (334)
..+.. .+..--+-+++|.+| .|+++|.++. ++++.+... .+..+|+.|+.+..++.+.++..+ ++
T Consensus 275 -fa~E~--------~gv~PDivt~aK~ig-~G~Pl~avv~-r~ei~~~~~g~~~~Tf~GNpva~Aaa~AvL~vie--~e- 340 (447)
T COG0160 275 -FAFEH--------FGVEPDIVTLAKSLG-GGLPLSAVVG-RAEIMDWPPGGHGGTFGGNPVACAAALAVLDVIE--EE- 340 (447)
T ss_pred -hhhhh--------cCCCCCEEEeccccc-CCCceeEEec-cHHhcccCCcccCCCCCcCHHHHHHHHHHHHHHH--Hc-
Confidence 22222 222333457899998 6999999998 888877222 345568899999988888886433 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC--CCcccCC--CceeEEeeecCCcCCC--CChhhHHHHHHHHHHhcCeEEcCCCCcCC
Q 019899 228 LETNKRRIKKLYDSFVAGLKQL--GIRCSES--SAGLYCWADMSGLIPS--YSEKGELELWDKLLNIAKINVTPGSACHC 301 (334)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~l~~~--g~~~~~~--~~g~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~gi~v~~g~~~~~ 301 (334)
.+.++..+.-+++.+.|+++ ..++... .-|.++.+++-+.... ...+....+..++++ +|+.+..+..+
T Consensus 341 --~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~-~Glil~~~G~~-- 415 (447)
T COG0160 341 --NLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFE-RGLLLLTCGPH-- 415 (447)
T ss_pred --cHHHHHHHHHHHHHHHHHHHHhhcCceecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHH-cCCEEeccCCC--
Confidence 34455555556666666554 2223322 2367777777654221 222344567777555 89988765533
Q ss_pred CCCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 302 IEPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 302 ~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
.+.+||...- +++++++.++++|.+++++.
T Consensus 416 --~nviRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 416 --GNVLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred --CcEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 5789999774 69999999999999998764
No 278
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.83 E-value=6.7e-18 Score=138.49 Aligned_cols=277 Identities=18% Similarity=0.273 Sum_probs=204.5
Q ss_pred CcHHHHHHHHH---HhcCCCCeEEecCCCCCChhhhhhhccC-cEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeE
Q 019899 25 GATPAVEILCF---CLADHGNALLVPSPYYPGFDRDIRFRTG-VELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRG 100 (334)
Q Consensus 25 g~~~~~~~~~~---~l~~~gd~vl~~~p~~~~~~~~~~~~~g-~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 100 (334)
++|.|+.+... .+++ ...|.+.+|+|.++...++ ..| .++..++.-+.+...+|++.+...|+.+ +...
T Consensus 107 sGTGAl~~~A~Fl~~~~~-~~~VY~SnPTW~nH~~if~-~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~A-----Pe~s 179 (410)
T KOG1412|consen 107 SGTGALRIAADFLATFYN-KNTVYVSNPTWENHHAIFE-KAGFTTVATYPYWDAENKCVDLEGFLSDLESA-----PEGS 179 (410)
T ss_pred cccchhhhhHHHHHHhcc-cceeEecCCchhHHHHHHH-HcCCceeeeeeeecCCCceecHHHHHHHHhhC-----CCCc
Confidence 45666655533 3444 4479999999999999999 888 5677777655566688999999988874 4454
Q ss_pred EEEeC-C-CCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCC--CcchhhhhhhccccCCCcEEEEecccccC
Q 019899 101 ILICN-P-ANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNE--EFVSMAEILEAEEVDKDRVHIIYGLSKDL 176 (334)
Q Consensus 101 i~~~~-p-~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~s~sK~~ 176 (334)
|++.+ + +||||+-.+.+++.+|+++.++.+...+.|-+|++|.-+.. ...-+..+..+ ....+++-||+|-+
T Consensus 180 i~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~----g~e~fv~QSFaKNf 255 (410)
T KOG1412|consen 180 IIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQ----GFELFVCQSFAKNF 255 (410)
T ss_pred EEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhc----CCeEEEEhhhhhhc
Confidence 44444 4 89999999999999999999999999999999999875422 22233344432 34478899999999
Q ss_pred CCCCceEEEE--eecCHHHHHHHHHh------hcccCCChHHHHHHHHhhCChHHHHHH---HHHHHHHHHHHHHHHHHH
Q 019899 177 SLPGFRTGVI--YSYNESVLAAAKKL------TRFCSISAPTQRLLISMLSDTKFIQEY---LETNKRRIKKLYDSFVAG 245 (334)
Q Consensus 177 ~~~g~r~g~i--~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 245 (334)
|+.+-|+|.+ +..++..+..+... ....+++..........|...+..++| +..+..++++++..++..
T Consensus 256 GlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~MR~aLrd~ 335 (410)
T KOG1412|consen 256 GLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKKMRTALRDH 335 (410)
T ss_pred ccccccccceEEEecChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999985 33566665555432 233456667778899999987766666 466778888899999998
Q ss_pred HHhCC----CcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHH
Q 019899 246 LKQLG----IRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPL 321 (334)
Q Consensus 246 l~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~ 321 (334)
|..++ |.-....-|||.+-.+. ..-++.|.+++.|++.+.. |++++.++...++.
T Consensus 336 L~aL~TPGtWDHI~~QiGMFSyTGLt-----------p~qV~~li~~h~vyLl~~G----------RInisGLN~~Nvey 394 (410)
T KOG1412|consen 336 LVALKTPGTWDHITQQIGMFSYTGLT-----------PAQVDHLIENHKVYLLSDG----------RINISGLNMKNVEY 394 (410)
T ss_pred HHhcCCCCcHHHHHhhccceeecCCC-----------HHHHHHHHHhceEEEecCC----------cEeeeccccccHHH
Confidence 88763 33334556777654433 2567777888999987532 89988889999999
Q ss_pred HHHHHHHHHHHc
Q 019899 322 VIERIQKVAETC 333 (334)
Q Consensus 322 ~l~~l~~~~~~~ 333 (334)
+.+++-+.++..
T Consensus 395 VAkAIde~Vr~~ 406 (410)
T KOG1412|consen 395 VAKAIDETVRAI 406 (410)
T ss_pred HHHHHHHHHHhh
Confidence 999998887653
No 279
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.83 E-value=5.4e-18 Score=147.63 Aligned_cols=288 Identities=15% Similarity=0.137 Sum_probs=192.1
Q ss_pred CCCcEEEecCcHHHHHHHHHHh--cCCCCeEEecCCCCCChhhhhhhccC-------------------cEEEEEeCCCC
Q 019899 16 DPSQIVLTAGATPAVEILCFCL--ADHGNALLVPSPYYPGFDRDIRFRTG-------------------VELIPVHCRST 74 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l--~~~gd~vl~~~p~~~~~~~~~~~~~g-------------------~~v~~v~~~~~ 74 (334)
..|.|-++|++|+|...+++.. ....|+|+..+-||.+..+.+....| ..+..+|.
T Consensus 108 ~~e~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~y--- 184 (432)
T COG0001 108 SIEKVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPY--- 184 (432)
T ss_pred cccEEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecC---
Confidence 3489999999999999998875 34678999999999988776542222 11223332
Q ss_pred CCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHH-HHHHHHHHHhcCcEEEEeccccccccCCCCcchhh
Q 019899 75 DNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRET-LYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMA 153 (334)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~-l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~ 153 (334)
.|++.+++++++. +..+.+|++.-.....|.+.|.++ ++.|.++|+++|+++|.||+...|...-.+.+...
T Consensus 185 ----ND~~al~~~~~~~---g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~ 257 (432)
T COG0001 185 ----NDLEALEEAFEEY---GDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYY 257 (432)
T ss_pred ----CCHHHHHHHHHHc---CCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCccccccc
Confidence 3899999999874 335665555544555688777665 99999999999999999999988776433444554
Q ss_pred hhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh-----cccCCChHHHHHHHHhhCChHHHHHHH
Q 019899 154 EILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT-----RFCSISAPTQRLLISMLSDTKFIQEYL 228 (334)
Q Consensus 154 ~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~ 228 (334)
.+.+ -+.+++|.+| .|+++|.+.+ +.++++.+.... ..++.|++++.+....++.....+...
T Consensus 258 gi~P----------DlttlGKiIG-GGlP~ga~gG-r~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y 325 (432)
T COG0001 258 GVEP----------DLTTLGKIIG-GGLPIGAFGG-RAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVY 325 (432)
T ss_pred CcCc----------chhhhhhhhc-CCcceeeecc-HHHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcccHH
Confidence 4433 4678999998 9999999998 889999876543 335678888888777775432101123
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccC-CCceeEEeeecCCcCCCC------ChhhHHHHHHHHHHhcCeEEcCCCCcCC
Q 019899 229 ETNKRRIKKLYDSFVAGLKQLGIRCSE-SSAGLYCWADMSGLIPSY------SEKGELELWDKLLNIAKINVTPGSACHC 301 (334)
Q Consensus 229 ~~~~~~~~~~~~~~~~~l~~~g~~~~~-~~~g~~~~~~~~~~~~~~------~~~~~~~~~~~ll~~~gi~v~~g~~~~~ 301 (334)
.++.+.-.+.++-+.+.+++.++++.. ..++++..+-.+.....+ ..+....+...|++ +||++.|+.+
T Consensus 326 ~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~-~GV~l~ps~~--- 401 (432)
T COG0001 326 ERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLN-RGVYLAPSQF--- 401 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHh-CCcccCCccc---
Confidence 333344444444555555556777653 334444322222111111 11123445666565 7999998763
Q ss_pred CCCCeEEEEecCCCcccHHHHHHHHHHHHHHc
Q 019899 302 IEPGWFRCCFTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 302 ~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
...-+|.. .++++|++.++++.+++++.
T Consensus 402 ---ea~flS~a-hte~di~~~~~a~~~~~~~~ 429 (432)
T COG0001 402 ---EAGFLSTA-HTEEDIDRTLEAADEAFKEL 429 (432)
T ss_pred ---cceeeecc-cCHHHHHHHHHHHHHHHHHh
Confidence 12236666 89999999999999988764
No 280
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.83 E-value=1.7e-17 Score=151.51 Aligned_cols=293 Identities=14% Similarity=0.090 Sum_probs=178.6
Q ss_pred CcEEEecCcHHHHHHHHHHh--cCCCCeEEecCCCCCChhhhhhhccC-------------cEEEEEeCCCCCC----cc
Q 019899 18 SQIVLTAGATPAVEILCFCL--ADHGNALLVPSPYYPGFDRDIRFRTG-------------VELIPVHCRSTDN----FA 78 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l--~~~gd~vl~~~p~~~~~~~~~~~~~g-------------~~v~~v~~~~~~~----~~ 78 (334)
+.+++++++++|+..++... ....++|+...++|.+......-..+ ..+..+|.....+ ..
T Consensus 118 ~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (443)
T PRK06058 118 KRSALFNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLA 197 (443)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccc
Confidence 57999999999999998743 22447899999998877543220111 1122233211111 01
Q ss_pred ccH-HHHHHHHHHHHH--cCCceeEEEEeCC-CCCcccCC-CHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhh
Q 019899 79 FSI-TALDQAFNQARK--RGVKVRGILICNP-ANPVGNII-PRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMA 153 (334)
Q Consensus 79 ~~~-~~l~~~l~~~~~--~~~~~~~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~ 153 (334)
.+. +.+++.++.... ...++.+|+ ..| +...|.+. +.+.++++.++|++||+++|.||++.+|...|..+..
T Consensus 198 ~~~~~~~~~~~~~l~~~~~~~~iAavi-~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~-- 274 (443)
T PRK06058 198 TDGEEAAARAITVIEKQVGADNLAAVI-IEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFAC-- 274 (443)
T ss_pred cchHHHHHHHHHHHHHhhCCCceEEEE-ECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHH--
Confidence 111 222222222111 123566555 556 44556654 5778999999999999999999999987655543211
Q ss_pred hhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHH--hhcccCCChHHHHHHHHhhCChHHHHHHHHHH
Q 019899 154 EILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKK--LTRFCSISAPTQRLLISMLSDTKFIQEYLETN 231 (334)
Q Consensus 154 ~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 231 (334)
+.. +..+| +.+++|.++ .|+++|++++ ++++.+.+.. +...++.|++++.++.+.++..+ + ...
T Consensus 275 ~~~---gv~PD----iv~~gK~l~-~G~Pi~av~~-~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~--~---~~l 340 (443)
T PRK06058 275 EHE---GIVPD----LITTAKGIA-GGLPLSAVTG-RAEIMDAPHPGGLGGTYGGNPVACAAALAAIETIE--E---DDL 340 (443)
T ss_pred Hhc---CCCCC----EEEEccccc-CCCccEEEEE-cHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHH--H---cCH
Confidence 111 12122 235689998 8999999998 8888887753 33556789999988888875432 1 234
Q ss_pred HHHHHHHHHHHHHHHHhC----CCcc-cCCCceeEEeeecCCcC-CCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCC
Q 019899 232 KRRIKKLYDSFVAGLKQL----GIRC-SESSAGLYCWADMSGLI-PSYSEKGELELWDKLLNIAKINVTPGSACHCIEPG 305 (334)
Q Consensus 232 ~~~~~~~~~~~~~~l~~~----g~~~-~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~ 305 (334)
.++++++.+++.+.|+++ ++.. +.+. |.++.+.+.... .....+....+...++ ++||.+.|+..+ .+
T Consensus 341 ~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~-G~~~~i~~~~~~~~~~~~~~~~~l~~~~~-~~Gv~~~~~~~~----~~ 414 (443)
T PRK06058 341 VARARQIEALMTDRLRALAAEDDRIGDVRGR-GAMIAIELVKPGTTEPDAELTKALAAAAH-AAGVIVLTCGTY----GN 414 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCcEEeeecc-ceEEEEEEecCCCCCCcHHHHHHHHHHHH-HCCeEEeccCCC----CC
Confidence 455556666777777653 2211 2344 444445553221 1111122334556644 589999886544 35
Q ss_pred eEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 306 WFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 306 ~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
++|+..+. ++++++++++++|.++++++
T Consensus 415 ~lr~~Ppl~~t~~~i~~~~~~l~~~l~~~ 443 (443)
T PRK06058 415 VIRLLPPLVIGDELLREGLDVLEAALADL 443 (443)
T ss_pred EEEEECCCccCHHHHHHHHHHHHHHHHhC
Confidence 89998664 69999999999999998763
No 281
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.83 E-value=1.8e-18 Score=154.45 Aligned_cols=271 Identities=19% Similarity=0.236 Sum_probs=172.8
Q ss_pred CCcEEEecCcHHHHHHHHHHh-cCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcC
Q 019899 17 PSQIVLTAGATPAVEILCFCL-ADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRG 95 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l-~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~ 95 (334)
..+++.++++|.|+.+++.++ .++||+|++|..+|.+....+. ..|++++.+++++ +.+.+|++.+++++++
T Consensus 40 ~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~~~ai~-~~G~~pv~~Di~~-~~~~id~~~~~~~i~~----- 112 (363)
T PF01041_consen 40 VKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPATASAIL-WAGAEPVFVDIDP-ETLNIDPEALEKAITP----- 112 (363)
T ss_dssp SSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THHHHHHH-HTT-EEEEE-BET-TTSSB-HHHHHHHHHT-----
T ss_pred CCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHHHHHHH-HhccEEEEEeccC-CcCCcCHHHHHHHhcc-----
Confidence 678999999999999999998 5899999999999999999998 9999999999963 6789999999999997
Q ss_pred CceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccc-cCCCCcchhhhhhhccccCCCcEEEEecc--
Q 019899 96 VKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSI-FGNEEFVSMAEILEAEEVDKDRVHIIYGL-- 172 (334)
Q Consensus 96 ~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-- 172 (334)
++++|+++ +..|...+ +.+|.++|+++|++||+|.+++.+. +.|....+ .+ ++.+.||
T Consensus 113 -~t~ai~~~---h~~G~~~d---~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G~-----------~g-d~~~fSf~~ 173 (363)
T PF01041_consen 113 -KTKAILVV---HLFGNPAD---MDAIRAIARKHGIPLIEDAAQAFGARYKGRPVGS-----------FG-DIAIFSFHP 173 (363)
T ss_dssp -TEEEEEEE----GGGB------HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETTS-----------SS-SEEEEESST
T ss_pred -CccEEEEe---cCCCCccc---HHHHHHHHHHcCCcEEEccccccCceeCCEeccC-----------CC-CceEecCCC
Confidence 88999988 45566666 9999999999999999999998743 22211111 22 3555666
Q ss_pred cccCCCCCceEEEEeecCHHHHHHHHHhhccc-------------------CCChHHHHHHHHhhCChHHHHHHHHHHHH
Q 019899 173 SKDLSLPGFRTGVIYSYNESVLAAAKKLTRFC-------------------SISAPTQRLLISMLSDTKFIQEYLETNKR 233 (334)
Q Consensus 173 sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 233 (334)
+|.++ .| ..|+++++++++.++++.++..+ ..+.+ ++++... . .+.+.+..+
T Consensus 174 ~K~i~-~g-eGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~-~AAigl~--Q----L~~L~~~~~ 244 (363)
T PF01041_consen 174 TKIIT-TG-EGGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSEL-QAAIGLA--Q----LKRLDEIIA 244 (363)
T ss_dssp TSSS--SS-S-EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHH-HHHHHHH--H----HHTHHHHHH
T ss_pred CCCCc-CC-CCeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcccccHHH-HHHHHHH--H----HHHhhhhHH
Confidence 58884 33 35889988999999888754322 11111 1111111 1 112344444
Q ss_pred HHHHHHHHHHHHHHhC-CCccc--CCCc---ee-EEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCC--cCCC--
Q 019899 234 RIKKLYDSFVAGLKQL-GIRCS--ESSA---GL-YCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSA--CHCI-- 302 (334)
Q Consensus 234 ~~~~~~~~~~~~l~~~-g~~~~--~~~~---g~-~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~--~~~~-- 302 (334)
+-+++.+.+.+.|.+. ++... .+.. .+ .+.+.++.... .+..++.+. |++.||.+.+... .+..
T Consensus 245 ~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~----~~rd~l~~~-L~~~GI~~~~~~~~pl~~~~~ 319 (363)
T PF01041_consen 245 RRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEAL----ADRDELVEA-LRARGIETRPHYPKPLHRQPV 319 (363)
T ss_dssp HHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGC----STHHHHHHH-HHHTTBEEBCSTSSCGGGSGG
T ss_pred HHHHHHHHHHHHHhcCCCccccccccccccccccccccccccccc----chHHHHHHH-HHHCCCcccccccCchhhhHH
Confidence 4556677788888776 34222 1221 11 12234443211 234677778 6668999886542 1100
Q ss_pred --------C----------CCeEEEEecC-CCcccHHHHHHHHH
Q 019899 303 --------E----------PGWFRCCFTS-LTHEDIPLVIERIQ 327 (334)
Q Consensus 303 --------~----------~~~iRi~~~~-~~~~~l~~~l~~l~ 327 (334)
. ...+-+.+.. .+++++++.++.|+
T Consensus 320 ~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 320 YRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp GTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred HHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 0 0135555554 68999999888875
No 282
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.82 E-value=6e-18 Score=148.81 Aligned_cols=270 Identities=17% Similarity=0.144 Sum_probs=166.6
Q ss_pred CcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhh---h------ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcC
Q 019899 25 GATPAVEILCFCLADHGNALLVPSPYYPGFDRDIR---F------RTGVELIPVHCRSTDNFAFSITALDQAFNQARKRG 95 (334)
Q Consensus 25 g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~---~------~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~ 95 (334)
+++.|+.+++.+|+++||+|+..++.++++...-. . ....+++.+++++ +...+|.+++++.++..
T Consensus 94 SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~-~~~~ID~d~l~~~a~~~---- 168 (399)
T PF00464_consen 94 SGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDP-DTGLIDYDELEKLAKEH---- 168 (399)
T ss_dssp SHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-T-TTSSB-HHHHHHHHHHH----
T ss_pred CchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeec-CCCeECHHHHHHHHhhc----
Confidence 56779999999999999999999887766543211 0 1235788888864 56799999999999987
Q ss_pred CceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEecccccc-ccCCCCcchhhhhhhccccCCCcEEEEecccc
Q 019899 96 VKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGS-IFGNEEFVSMAEILEAEEVDKDRVHIIYGLSK 174 (334)
Q Consensus 96 ~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK 174 (334)
+|++|++....+| ..+| .+++.++|++.|.++++|-+|... .-+| .+++-. ...+++.+|.+|
T Consensus 169 -kPklIi~G~S~y~--~~~d---~~~~reIad~vga~l~~D~sH~~GLIa~g-~~~~P~---------~~ADvvt~sThK 232 (399)
T PF00464_consen 169 -KPKLIICGASSYP--RPID---FKRFREIADEVGAYLMADISHIAGLIAGG-LFPNPF---------PYADVVTGSTHK 232 (399)
T ss_dssp ---SEEEEE-SSTS--S------HHHHHHHHHHTT-EEEEE-TTTHHHHHTT-SS--GC---------CTSSEEEEESSG
T ss_pred -CCCEEEECchhcc--CccC---HHHHHHHHHhcCcEEEecccccccceehh-eecCcc---------ccceEEEeeccc
Confidence 9997777765554 3455 788888899999999999998543 2322 222211 224688899999
Q ss_pred cCCCCCceEEEEeec-------------CHHHHHHHHHhhcccC-CChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 019899 175 DLSLPGFRTGVIYSY-------------NESVLAAAKKLTRFCS-ISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYD 240 (334)
Q Consensus 175 ~~~~~g~r~g~i~~~-------------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (334)
++ +|.|.|.|+++ ++++.+.+.+.-.++. .++.....++.+....+.+...+.++.+++-++++
T Consensus 233 tl--~GPrggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk 310 (399)
T PF00464_consen 233 TL--RGPRGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAK 310 (399)
T ss_dssp GG---SSS-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHH
T ss_pred cc--cccCceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHH
Confidence 99 77889999995 3889999987554432 23333332222222222223445788899999999
Q ss_pred HHHHHHHhCCCccc-CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEc----CCCCcCCCCCCeEEEEecC--
Q 019899 241 SFVAGLKQLGIRCS-ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVT----PGSACHCIEPGWFRCCFTS-- 313 (334)
Q Consensus 241 ~~~~~l~~~g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~----~g~~~~~~~~~~iRi~~~~-- 313 (334)
.|.+.|.+.|+++. ....+..+|+++..... +..+ +...|++.||.+. |+. -.+..+..+|++...
T Consensus 311 ~La~~L~~~G~~v~~ggTd~H~vlvd~~~~~~-----~g~~-a~~~Le~~gI~vnkn~iP~d-~~~~~~sGlRlGT~~lT 383 (399)
T PF00464_consen 311 ALAEALQERGFKVVTGGTDNHQVLVDLRSFGI-----DGKE-AEKALEEAGIIVNKNTIPGD-RSPFVPSGLRLGTPALT 383 (399)
T ss_dssp HHHHHHHHTT-EEGGGS-SSSEEEEEGGGGTS------HHH-HHHHHHHTTEE-EEE--TTT-STTTT-SEEEEESHHHH
T ss_pred HHHHHHhhCCcEEEECCCCCCeEEEEeccccc-----chHH-HHHHHHhcCeeecccccCCC-CCCCCCCEEEECCHHHH
Confidence 99999999999987 34456678889865321 2234 4455888999875 333 111134689999764
Q ss_pred ---CCcccHHHHHH
Q 019899 314 ---LTHEDIPLVIE 324 (334)
Q Consensus 314 ---~~~~~l~~~l~ 324 (334)
..++|++++.+
T Consensus 384 ~rG~~e~dm~~iA~ 397 (399)
T PF00464_consen 384 RRGMKEEDMKEIAE 397 (399)
T ss_dssp HTT--HHHHHHHHH
T ss_pred hCCCCHHHHHHHHh
Confidence 24455554443
No 283
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.82 E-value=2.1e-17 Score=150.29 Aligned_cols=287 Identities=12% Similarity=0.088 Sum_probs=175.5
Q ss_pred cEEE-ecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChhhh-hhhccC------------cEEEEEeCCCCC-CccccH
Q 019899 19 QIVL-TAGATPAVEILCFCLA--DHGNALLVPSPYYPGFDRD-IRFRTG------------VELIPVHCRSTD-NFAFSI 81 (334)
Q Consensus 19 ~i~~-~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~~~-~~~~~g------------~~v~~v~~~~~~-~~~~~~ 81 (334)
.+++ ++++++|+..++.... ....+|+....+|.+.... +. ..| ..+..+|.++.. ....|+
T Consensus 104 ~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 182 (425)
T PRK09264 104 KVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLA-VTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTL 182 (425)
T ss_pred eEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHH-hcCCcccccCCCCCCCCeEEeCCCCccccchhHH
Confidence 5666 4899999999887652 3446788888888765432 21 111 124445542110 001367
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCccc-CCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGN-IIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~-~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
+++++.+++......++.+|++.......|. +.+.+.+++|.++|++||+++|+||++.++...|..+ ..... +
T Consensus 183 ~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~-~~~~~----~ 257 (425)
T PRK09264 183 AYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFF-SFERA----G 257 (425)
T ss_pred HHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHH-HHhhc----C
Confidence 8888888653211124665655544777787 5678899999999999999999999998765544321 11111 1
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHH--hhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKK--LTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
..++ +.+++|.++..|+++|++++ ++++ ..+.. ....++.++++..+..+.++.. +++ ....++++++
T Consensus 258 v~PD----i~t~~K~l~~~G~pigav~~-~~~i-~~~~~~~~~~T~~gnp~~~aaa~a~l~~~--~~~--~~l~~~~~~~ 327 (425)
T PRK09264 258 ITPD----IVTLSKSISGYGLPMALVLI-KPEL-DVWKPGEHNGTFRGNNLAFVTATAALEEY--WSD--DAFEKEVKAK 327 (425)
T ss_pred CCCC----EEEeccccCCCccceEEEEE-chhh-hccCCCccCCCCCCCHHHHHHHHHHHHHH--Hhh--hHHHHHHHHH
Confidence 1122 34778999844999999999 5665 34332 2334566777766655555211 111 1234445555
Q ss_pred HHHHHHHHHhC----C-CcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC
Q 019899 239 YDSFVAGLKQL----G-IRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS 313 (334)
Q Consensus 239 ~~~~~~~l~~~----g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~ 313 (334)
.+++.+.|+++ + +.......|.+.++.++.. .....+... +.++||.+.+...+ ...+|++++.
T Consensus 328 g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~i~l~~~------~~~~~l~~~-~~~~Gv~~~~~~~~----~~~lr~~p~l 396 (425)
T PRK09264 328 GELVRERLEEIAAKYPGLGAEVRGRGMMQGIDFGDG------ELAGKIAAE-AFENGLIIETSGPE----DEVVKLLPPL 396 (425)
T ss_pred HHHHHHHHHHHHHhCCCceecceecccEEEEEecCh------HHHHHHHHH-HHHCCCEEeccCCC----CCEEEEeCCC
Confidence 55555555442 2 1111233577778888642 223466777 44589999875432 3678888764
Q ss_pred -CCcccHHHHHHHHHHHHHH
Q 019899 314 -LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 314 -~~~~~l~~~l~~l~~~~~~ 332 (334)
.+++++++++++|.+++++
T Consensus 397 ~~t~~ei~~~~~~l~~~l~~ 416 (425)
T PRK09264 397 TIDEEELEEGLDILEEAVAE 416 (425)
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 6999999999999998865
No 284
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.82 E-value=6.5e-18 Score=152.85 Aligned_cols=286 Identities=13% Similarity=0.084 Sum_probs=174.3
Q ss_pred cEEE-ecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChhhhhhhccC------------cEEEEEeCCCCC-CccccHH
Q 019899 19 QIVL-TAGATPAVEILCFCLA--DHGNALLVPSPYYPGFDRDIRFRTG------------VELIPVHCRSTD-NFAFSIT 82 (334)
Q Consensus 19 ~i~~-~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~~g------------~~v~~v~~~~~~-~~~~~~~ 82 (334)
.+++ ++++++|+..++.... ....+|+....+|.+......-..| ..+..+|.++.. ...-+++
T Consensus 100 ~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 179 (412)
T TIGR02407 100 KVQFPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIA 179 (412)
T ss_pred eEEEeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHH
Confidence 4666 4899999999987653 2346788888888775433220211 122334431100 0012466
Q ss_pred HHHHHHHHHHHcCCceeEEEEeCCCCCccc-CCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcc-hhhhhhhccc
Q 019899 83 ALDQAFNQARKRGVKVRGILICNPANPVGN-IIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFV-SMAEILEAEE 160 (334)
Q Consensus 83 ~l~~~l~~~~~~~~~~~~i~~~~p~nptG~-~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~-~~~~~~~~~~ 160 (334)
.+++.+++......++.+|++...+++.|. ..|.+.+++|.++|++||+++|+||++.++...|..+. ....
T Consensus 180 ~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~------ 253 (412)
T TIGR02407 180 YFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAG------ 253 (412)
T ss_pred HHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccC------
Confidence 777777643221135666665544888998 56888899999999999999999999987654443221 1111
Q ss_pred cCCCcEEEEecccccCCCC-CceEEEEeecCHHHHHHHHH--hhcccCCChHHHHHHHHhhC----ChHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLP-GFRTGVIYSYNESVLAAAKK--LTRFCSISAPTQRLLISMLS----DTKFIQEYLETNKR 233 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~-g~r~g~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~ 233 (334)
+.++ +.+++|+++ + |+++|++++ ++++ +.+.. ....++.|++...++.+.++ +.+ +.++..++.+
T Consensus 254 v~PD----i~~~~K~lg-~~G~pigav~~-~~~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~-l~~~~~~~g~ 325 (412)
T TIGR02407 254 IEPD----IVCLSKSIS-GYGLPLALTLI-KPEL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSDDA-FEKAVQRKSE 325 (412)
T ss_pred CCCC----EEEechhcc-CCccceeEEEE-chhh-hccCCCccCCCCCccHHHHHHHHHHHHHHhcccH-HHHHHHHHHH
Confidence 1133 346889998 6 999999999 5555 44432 23445667775555444433 221 2233333333
Q ss_pred HHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC
Q 019899 234 RIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS 313 (334)
Q Consensus 234 ~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~ 313 (334)
+++++.+.+.+.+.+ +.......|+++|+.++.. ....++...+ .++||.+.+... .++.+|++++.
T Consensus 326 ~l~~~l~~l~~~~~~--~~~~vrg~Gl~~~l~l~~~------~~~~~~~~~~-~~~Gv~v~~~~~----~~~~lr~~p~l 392 (412)
T TIGR02407 326 IIQERLDRIVAEYPE--LIKQVRGRGLMQGIECGDG------DLAGKIAKAA-FENGLIIETSGP----NDEVIKLLPPL 392 (412)
T ss_pred HHHHHHHHHHhhCCC--ceEeeecceeEEEEEecCh------HHHHHHHHHH-HHCCCEEeccCC----CCCEEEEECCC
Confidence 333333333222211 2233445688999999753 1234667774 458999976432 14679999875
Q ss_pred -CCcccHHHHHHHHHHHHH
Q 019899 314 -LTHEDIPLVIERIQKVAE 331 (334)
Q Consensus 314 -~~~~~l~~~l~~l~~~~~ 331 (334)
+++++++++++++.++++
T Consensus 393 ~~t~~~i~~~~~~l~~~l~ 411 (412)
T TIGR02407 393 TIDEETLQQGLDILEQAVE 411 (412)
T ss_pred CCCHHHHHHHHHHHHHHHh
Confidence 699999999999999885
No 285
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.82 E-value=4.5e-19 Score=141.23 Aligned_cols=164 Identities=18% Similarity=0.205 Sum_probs=126.0
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChh-hhhhhccCcEEEEEeCCCCCCccccHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFD-RDIRFRTGVELIPVHCRSTDNFAFSITA 83 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~-~~~~~~~g~~v~~v~~~~~~~~~~~~~~ 83 (334)
+++.+++.++.+.+++++++|+++++.+++.++.+++++|+++.++|++.. ..+. ..|.+++.++..+......+.+.
T Consensus 5 ~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~g~~~~~v~~~~~~~~~~~~~~ 83 (170)
T cd01494 5 LEEKLARLLQPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAE-LAGAKPVPVPVDDAGYGGLDVAI 83 (170)
T ss_pred HHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHH-hcCCEEEEeccCCCCccchhhhh
Confidence 344444445457889999999999999999999888999999999999998 6776 88999999997543333333334
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCC
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDK 163 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (334)
+++... +.+++++++++++||+|...+ +++|.++|+++|+++|+|++|+.+...... .... ..
T Consensus 84 ~~~~~~-----~~~~~~v~~~~~~~~~g~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~~~~----~~~~-----~~ 146 (170)
T cd01494 84 LEELKA-----KPNVALIVITPNTTSGGVLVP---LKEIRKIAKEYGILLLVDAASAGGASPAPG----VLIP-----EG 146 (170)
T ss_pred hhhccc-----cCceEEEEEecCcCCCCeEcC---HHHHHHHHHHcCCEEEEecccccccccccc----cccc-----cc
Confidence 443322 248899999999999999999 688899999999999999999986654322 1111 14
Q ss_pred CcEEEEecccccCCCCCceEEEEee
Q 019899 164 DRVHIIYGLSKDLSLPGFRTGVIYS 188 (334)
Q Consensus 164 ~~~~~~~s~sK~~~~~g~r~g~i~~ 188 (334)
+.++++.|++|.++. .++|+++.
T Consensus 147 ~~d~~~~s~~K~~~~--~~~G~l~~ 169 (170)
T cd01494 147 GADVVTFSLHKNLGG--EGGGVVIV 169 (170)
T ss_pred cCCEEEEEcccccCC--CceEEEEe
Confidence 567888999999974 67899886
No 286
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.81 E-value=3.4e-18 Score=152.14 Aligned_cols=279 Identities=12% Similarity=0.139 Sum_probs=179.7
Q ss_pred hhhhhcCCCCC-CCCcEEEecC-cHHHHHHHHHHhcC---CCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccc
Q 019899 5 MSQVLGQAVSF-DPSQIVLTAG-ATPAVEILCFCLAD---HGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 5 ~~~~~~~~~~~-~~~~i~~~~g-~~~~~~~~~~~l~~---~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~ 79 (334)
.++.+++.+++ +++++++|+| +|++++.++.++.. ++|.|+.....+ ...+.++ ..|.+++.++.++..++ .
T Consensus 49 ~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~~~~~~~~i~~g~~~~-~~~~~a~-~~g~~~~~~~~~~~g~~-~ 125 (355)
T cd00611 49 AESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLGDKGTADYVVTGAWSA-KAAKEAK-RYGGVVVIVAAKEEGKY-T 125 (355)
T ss_pred HHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHH-HHHHHHH-hcCCCcEEEecccccCC-C
Confidence 34455556665 4568999988 99999999999976 555555422221 1222455 77999998887422112 1
Q ss_pred c-HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhc
Q 019899 80 S-ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEA 158 (334)
Q Consensus 80 ~-~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~ 158 (334)
+ .+..+..+++ ++++|.+++..|.||..++ ++++.+|+++++|.+++. |....++..+
T Consensus 126 ~~~~~~~~~~~~------~~~lV~~~h~~t~tG~~~~--------~i~~~~g~~~~VDa~qs~----g~~~idv~~~--- 184 (355)
T cd00611 126 KIPDVETWDLAP------DAAYVHYCSNETIHGVEFD--------EVPDTGGVPLVADMSSNI----LSRPIDVSKF--- 184 (355)
T ss_pred CCCCHhhcCCCC------CCCEEEEeCCcccccEEcc--------eecccCCCeEEEEccccc----cCCCCCHHHh---
Confidence 3 2222233333 7899999999999999854 234459999999999876 3334454432
Q ss_pred cccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh--------------hcccCCChHHHHHHHHhhCChHHH
Q 019899 159 EEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL--------------TRFCSISAPTQRLLISMLSDTKFI 224 (334)
Q Consensus 159 ~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~l~~~~~~ 224 (334)
+ +.+.|.+|.+|++| +|.+++ ++++.+++... ...+++|.....++.++++...
T Consensus 185 -----~--~~~ss~~K~lGP~G--~g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~-- 252 (355)
T cd00611 185 -----G--VIYAGAQKNLGPAG--VTVVIV-RKDLLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLK-- 252 (355)
T ss_pred -----C--EEEeecccccCCCc--eEEEEE-CHHHHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHH--
Confidence 2 35566899988666 788888 67666554321 0123445556666666664321
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHHHhC-CCc-ccC-C--CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCC
Q 019899 225 QE-YLETNKRRIKKLYDSFVAGLKQL-GIR-CSE-S--SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSA 298 (334)
Q Consensus 225 ~~-~~~~~~~~~~~~~~~~~~~l~~~-g~~-~~~-~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~ 298 (334)
+. .++.+.++.++..+++.+.|+++ |+. ... + ..+..+.+.++.. ....++... +.+.|+.+.++..
T Consensus 253 ~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~~~~------~l~~~~~~~-~~r~G~~~~~~~~ 325 (355)
T cd00611 253 EQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLGKE------ELEKEFLKE-AEAAGMIGLKGHR 325 (355)
T ss_pred HcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEEcCCh------hhhHHHHHH-HHHCCCcccCCCc
Confidence 22 36788899999999999999998 763 211 1 2223355555542 011233344 4558997666653
Q ss_pred cCCCCCCeEEEEecC-CCcccHHHHHHHHHHHH
Q 019899 299 CHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVA 330 (334)
Q Consensus 299 ~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~ 330 (334)
..+.+|+|+.. .+++|++++++.|+++.
T Consensus 326 ----~~g~vR~S~~~~nt~edi~~l~~al~~~~ 354 (355)
T cd00611 326 ----SVGGIRASIYNALSLEGVQALADFMKEFQ 354 (355)
T ss_pred ----ccCeEEEEccCCCCHHHHHHHHHHHHHHh
Confidence 24689999985 59999999999999864
No 287
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.81 E-value=6.7e-17 Score=143.78 Aligned_cols=275 Identities=15% Similarity=0.145 Sum_probs=171.1
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhh----hhhhccCcEEEEEeCCCCCCcccc
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDR----DIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
+.++++... ..+..+.+++++.|+.+++.++.++||+|+++.+.|.+... .+. ..|.+++.+++++.+.+.+
T Consensus 69 lE~~la~le--g~~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~-~~Gi~v~fvd~~~~~~~~l- 144 (384)
T PRK06434 69 FEEKYAVLE--NAEHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLK-TLGIHVDYIDTDRLNSLDF- 144 (384)
T ss_pred HHHHHHHHh--CCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHH-hcCcEEEEECCCChhheee-
Confidence 334444333 34578999999999999999999999999999888877664 344 5799999999743222221
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
+. .++++|++.+|+||++.+.| +++|.++|++++ +++|.+++.. ....++.
T Consensus 145 --------~~-----~~tklv~~e~~snpt~~v~D---i~~I~~la~~~~--lvVD~t~~s~-------~~~~pl~---- 195 (384)
T PRK06434 145 --------DP-----SNYDLIYAESITNPTLKVPD---IKNVSSFCHEND--VIVDATFASP-------YNQNPLD---- 195 (384)
T ss_pred --------cC-----CCeeEEEEEcCCCCCceeec---HHHHHHHHHHcC--eEEECCCCCc-------ccCCchh----
Confidence 11 26899999999999999988 999999999998 4669997421 1111111
Q ss_pred cCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHHhhcccC--CChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKKLTRFCS--ISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
.+.+++++|.+|.++.+| .=.|.+++.++++.+.++.....++ .++.....+..-++. +..+.++..+
T Consensus 196 --~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL~t-------L~~R~~r~~~ 266 (384)
T PRK06434 196 --LGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSNPDPIQAYLALRGLKT-------LGLRMEKHNK 266 (384)
T ss_pred --cCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhCCCc-------HHHHHHHHHH
Confidence 466788999999996444 4467777767777777765543322 233322222222222 2344555667
Q ss_pred HHHHHHHHHHhCC-Cc-cc-----------CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCc-----
Q 019899 238 LYDSFVAGLKQLG-IR-CS-----------ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSAC----- 299 (334)
Q Consensus 238 ~~~~~~~~l~~~g-~~-~~-----------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~----- 299 (334)
++..+.+.|+++. ++ +. ..-+| .+.+++.. .+....+.+. ++-..+.+.-|...
T Consensus 267 ~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~-~~sf~l~~------~~~~~~f~~~-l~l~~~~~slG~~~sl~~~ 338 (384)
T PRK06434 267 NGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGG-MLSFELRS------MEDVHKFIRN-LEIPMVAASLGGVESLITL 338 (384)
T ss_pred HHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCc-eEEEEECC------HHHHHHHHHh-CCcceEccCCCCCCeeeEC
Confidence 7777777887762 21 11 11233 34466642 1122333333 22222222222210
Q ss_pred -----CC-----------CCCCeEEEEecCCCcccHHHHHHHHHHHHHH
Q 019899 300 -----HC-----------IEPGWFRCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 300 -----~~-----------~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
+. ..++-+|+|++ .|+.+.+++.|.+++++
T Consensus 339 p~~~~h~~~~~e~~~~~gi~~~liRlsvG---lEd~~dLi~dl~~Al~~ 384 (384)
T PRK06434 339 PVETSHSSLSPEERERLGISDNLVRFSIG---IEDIDDLIKDIENALSK 384 (384)
T ss_pred CCccccccCCHHHHHhcCCCcCeEEEEeC---cCCHHHHHHHHHHHhcC
Confidence 00 02357999999 77888999999988753
No 288
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.81 E-value=1.8e-17 Score=149.09 Aligned_cols=278 Identities=14% Similarity=0.136 Sum_probs=176.0
Q ss_pred CCcEEEecCcHHHHHHHHHHhc------C-CCCeEEecCCCCCCh-hhhhhhccCcEEEEEeCCC-CCCc----cccHHH
Q 019899 17 PSQIVLTAGATPAVEILCFCLA------D-HGNALLVPSPYYPGF-DRDIRFRTGVELIPVHCRS-TDNF----AFSITA 83 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~------~-~gd~vl~~~p~~~~~-~~~~~~~~g~~v~~v~~~~-~~~~----~~~~~~ 83 (334)
.+.+++++++++|+..++.... + ...+|+..+.+|.+. ...+. ..|.........+ ..++ ..|++.
T Consensus 93 ~~~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~-~s~~~~~~~~~~~~~~~~~~~~~~d~~~ 171 (395)
T PRK03715 93 FDKVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMS-ASGKPGWDTIFAPQVPGFPKAELNDIAS 171 (395)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHh-hcCCcccccCCCCCCCCceeeCCchHHH
Confidence 4689999999999999988764 1 225677777766654 34444 4443211110000 0111 247888
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcc-hhhhhhhcccc
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFV-SMAEILEAEEV 161 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~-~~~~~~~~~~~ 161 (334)
+++.+++ ++.+|++...++..|.+. +.+.++++.++|++||+++|+||++.++...|..+. ....+
T Consensus 172 l~~~l~~------~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv------ 239 (395)
T PRK03715 172 VEKLITD------KTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGI------ 239 (395)
T ss_pred HHHHcCC------CceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCC------
Confidence 8888864 677677665577888875 578899999999999999999999997544444321 11111
Q ss_pred CCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHH-HhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAK-KLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYD 240 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (334)
.+| +.+++|.++ .|+++|.+++ ++++..... .+...++.+++...++.+.++.. ++ ....++++++.+
T Consensus 240 ~PD----i~t~gK~lg-~G~p~~av~~-~~~i~~~~~~~~~~T~~g~pl~~aaala~L~~l---~~--~~l~~~~~~~g~ 308 (395)
T PRK03715 240 EPD----IMTLGKGIG-GGVPLAALLA-KAEVAVFEAGDQGGTYNGNPLMTAVGVAVISQL---LA--PGFLEGVRARGE 308 (395)
T ss_pred CCc----eeeehhhhh-CCcceEEEEE-ccccccccCCCcCCCCCCCHHHHHHHHHHHHHH---Hh--ccHHHHHHHHHH
Confidence 122 357899998 7899999998 666642211 12344566777766666665432 21 234556666667
Q ss_pred HHHHHHHhC----CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhc---CeEEcCCCCcCCCCCCeEEEEecC
Q 019899 241 SFVAGLKQL----GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIA---KINVTPGSACHCIEPGWFRCCFTS 313 (334)
Q Consensus 241 ~~~~~l~~~----g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~---gi~v~~g~~~~~~~~~~iRi~~~~ 313 (334)
++.+.|+++ ++.-... .|.++.+.+... ....+... +.+. ||.+.+.. ++.+|++++.
T Consensus 309 ~l~~~L~~l~~~~~i~~vrG-~Glm~~i~l~~~-------~~~~~~~~-~~~~~~~Gi~~~~~~------~~~lR~~p~l 373 (395)
T PRK03715 309 YLKEKLLELSEERGLEGERG-EGLLRALLLGKD-------IGPQIVEK-ARDMQPDGLLLNAPR------PNLLRFMPAL 373 (395)
T ss_pred HHHHHHHHHhhcCCcCeEEc-ceeEEEEEecCc-------hHHHHHHH-HHhccCCCEEEeecC------CCEEEEeCCc
Confidence 777777653 4332233 355666666532 11233333 3334 99886422 3579999885
Q ss_pred -CCcccHHHHHHHHHHHHHHc
Q 019899 314 -LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 314 -~~~~~l~~~l~~l~~~~~~~ 333 (334)
+|++++++++++|.++++++
T Consensus 374 ~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 374 NVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred ccCHHHHHHHHHHHHHHHHhh
Confidence 69999999999999998764
No 289
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.80 E-value=1.1e-17 Score=148.55 Aligned_cols=280 Identities=10% Similarity=0.085 Sum_probs=187.4
Q ss_pred hhcCCCCCC-CCcEEEe-cCcHHHHHHHHHHhcCCCCeEEecCCCCCC--hhhhhhhccCcEEEEEeCCCCCCccccHHH
Q 019899 8 VLGQAVSFD-PSQIVLT-AGATPAVEILCFCLADHGNALLVPSPYYPG--FDRDIRFRTGVELIPVHCRSTDNFAFSITA 83 (334)
Q Consensus 8 ~~~~~~~~~-~~~i~~~-~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~--~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~ 83 (334)
.+.+.++.+ ..+++++ ++++.++.+++.++..+|+++++..-..++ +.+.++ ..|.. +.+......+ ..+..+
T Consensus 56 ~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~~g~~~l~i~~G~fg~r~~~~a~-~~g~~-~~~~~~~~~g-~~~~~~ 132 (360)
T PRK05355 56 DLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLGGGKKADYVDTGSWSKKAIKEAK-KYGEV-NVAASSEDDG-FTYIPP 132 (360)
T ss_pred HHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHH-HhCCc-eEEecccccC-CCCCCC
Confidence 333445442 3456666 567889999999999999888877654443 233455 67754 5555432133 334444
Q ss_pred HHH-HHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccC
Q 019899 84 LDQ-AFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVD 162 (334)
Q Consensus 84 l~~-~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (334)
+++ .+++ ++++|.+++..|.||...+ ++.++ +|+++++|.+.+. +....++..
T Consensus 133 ~~~~~l~~------~~~~V~~th~eTstGv~~~--~i~~i------~g~l~vVDavss~----g~~~idv~~-------- 186 (360)
T PRK05355 133 LDEWQLSD------DAAYVHYTSNETIDGTEFH--ELPDT------GDVPLVADMSSDI----LSRPIDVSK-------- 186 (360)
T ss_pred hhhccCCC------CCCEEEEccCCCcceEecC--ccccc------CCCcEEEEcCccc----cCccCCHHH--------
Confidence 444 5654 6899999999999999983 25555 8999999999875 333344432
Q ss_pred CCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHH-h-------------hcccCCChHHHHHHHHhhCChHHHHH-H
Q 019899 163 KDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKK-L-------------TRFCSISAPTQRLLISMLSDTKFIQE-Y 227 (334)
Q Consensus 163 ~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~-~-------------~~~~~~~~~~~~~~~~~l~~~~~~~~-~ 227 (334)
.+ +++.|.+|.+|++| +|.++. ++++.+++.. . ..++++|....+++.++++... +. .
T Consensus 187 ~d--~~~~ssqK~lgP~G--lg~l~~-s~~~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~--~~gG 259 (360)
T PRK05355 187 FG--LIYAGAQKNIGPAG--LTIVIV-REDLLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLK--EQGG 259 (360)
T ss_pred cc--EEEEeccccccCCc--eEEEEE-CHHHHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHH--HccC
Confidence 33 77889999998666 788888 6666555433 1 1234556666677777765422 33 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCc-ccCC---CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCC
Q 019899 228 LETNKRRIKKLYDSFVAGLKQLGIR-CSES---SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIE 303 (334)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~l~~~g~~-~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~ 303 (334)
++++.++.++..+++.+.|+++++. ...+ ..+..+.+.+|.. .+..++... +.++|+.+.+|.. .
T Consensus 260 ~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~------~~~~~~~~~-~~~~Gi~~~~~~~----~ 328 (360)
T PRK05355 260 VAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADE------ELDKKFLAE-AKAAGLVGLKGHR----S 328 (360)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCCh------HHHHHHHHH-HHHCCCcccCCCC----c
Confidence 6888899999999999999998753 2111 2234455666653 122345555 4558999866663 2
Q ss_pred CCeEEEEecC-CCcccHHHHHHHHHHHHHHcC
Q 019899 304 PGWFRCCFTS-LTHEDIPLVIERIQKVAETCK 334 (334)
Q Consensus 304 ~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~~ 334 (334)
.+.+|+|+.. .+.+|++++++.|+++++++.
T Consensus 329 ~g~vRiS~~~~nt~eei~~l~~~l~~~~~~~~ 360 (360)
T PRK05355 329 VGGMRASIYNAMPLEGVQALVDFMKEFERRHG 360 (360)
T ss_pred cCcEEEECCCCCCHHHHHHHHHHHHHHHHhcC
Confidence 4689999886 699999999999999998763
No 290
>PLN02263 serine decarboxylase
Probab=99.80 E-value=4.5e-17 Score=146.03 Aligned_cols=286 Identities=8% Similarity=-0.024 Sum_probs=189.7
Q ss_pred hhhhhhhcCCCCCCCC--cEEEecCcHHHHHHHHHHhcC--CCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcc
Q 019899 3 GFMSQVLGQAVSFDPS--QIVLTAGATPAVEILCFCLAD--HGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFA 78 (334)
Q Consensus 3 ~~~~~~~~~~~~~~~~--~i~~~~g~~~~~~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~ 78 (334)
+|+.+.++ .+++ .=++|+|+|+++..++.+.-+ +...++++..+|+++..++. .+|.+++.||+ +.++.
T Consensus 140 ~wla~L~g----~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~-llgi~~~~Vp~--d~~g~ 212 (470)
T PLN02263 140 DWFARLWE----IEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAAR-MYRMECVKVDT--LVSGE 212 (470)
T ss_pred HHHHHHhC----CCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHH-hcCCcceEecc--CCCCc
Confidence 56666555 3332 347899999999988777532 23478899999999999999 99999999998 45678
Q ss_pred ccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCc-----EEEEeccccccccCCCCcchhh
Q 019899 79 FSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNI-----HVISDEIYGGSIFGNEEFVSMA 153 (334)
Q Consensus 79 ~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~-----~vi~D~~~~~~~~~~~~~~~~~ 153 (334)
+|+++|+++|++. +.++-+|+.+.+++++|.+-| +++|.++|+++|+ |+++|.+|+++..+-....+..
T Consensus 213 mD~~aL~~aI~~d---~~~P~iVvataGTT~~GAiDp---i~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~ 286 (470)
T PLN02263 213 IDCADFKAKLLAN---KDKPAIINVNIGTTVKGAVDD---LDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPKV 286 (470)
T ss_pred CcHHHHHHHHHhC---CCCcEEEEEEecCCCCcCCCC---HHHHHHHHHHcCCccCCeeEEEeccchhhHhhhccccccc
Confidence 9999999999763 123566777778999999999 9999999999996 9999999988654211111111
Q ss_pred hhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc-------cCCChHHHHHHHHhhCChHHHHH
Q 019899 154 EILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF-------CSISAPTQRLLISMLSDTKFIQE 226 (334)
Q Consensus 154 ~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~~~~~~ 226 (334)
.+ ....+-+..+++|+++ .....|.++.++ ...+.+.....+ ...+.....++..|.....+..+
T Consensus 287 df------~~~vDSIsvD~HK~l~-~P~~cgvll~R~-~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~~G~~ 358 (470)
T PLN02263 287 TF------KKPIGSVSVSGHKFVG-CPMPCGVQITRM-EHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYR 358 (470)
T ss_pred CC------CcCccEEEECCccccC-CCcCEEEEEEeh-hhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHHhCHH
Confidence 11 1223334568999886 778899999854 433433221111 11222222222222221112245
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCe
Q 019899 227 YLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGW 306 (334)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~ 306 (334)
.+.+..++..++++++.+.|++.|+.....+....+.+.-|. .+. . .+|-.+.. .++.
T Consensus 359 G~~~~i~~~~~~A~~l~~~l~~~g~~~~~~p~s~~V~f~~p~----------~~~----~-~~gW~L~~-------~~~~ 416 (470)
T PLN02263 359 GFQKEVQKCLRNAHYLKDRLREAGISAMLNELSSTVVFERPK----------DEE----F-VRRWQLAC-------QGNI 416 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCceEEEEecCc----------hHH----h-hcceEEcc-------CCCc
Confidence 567788888899999999999998876543334334344332 111 1 13544443 1346
Q ss_pred EEEEecC-CCcccHHHHHHHHHHHHH
Q 019899 307 FRCCFTS-LTHEDIPLVIERIQKVAE 331 (334)
Q Consensus 307 iRi~~~~-~~~~~l~~~l~~l~~~~~ 331 (334)
+++++.. .+.+.++++++.|++..+
T Consensus 417 ~Hivvmphv~~~~id~fi~DL~~~~~ 442 (470)
T PLN02263 417 AHVVVMPSVTIEKLDYFLKELVEKRS 442 (470)
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHHHh
Confidence 8999886 688999999999998765
No 291
>PRK15029 arginine decarboxylase; Provisional
Probab=99.80 E-value=2.6e-17 Score=155.50 Aligned_cols=225 Identities=10% Similarity=0.059 Sum_probs=144.4
Q ss_pred CCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCc----ccc-----HHHHHHH
Q 019899 17 PSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNF----AFS-----ITALDQA 87 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~----~~~-----~~~l~~~ 87 (334)
....+++||+|.++.+++++++++||+|+++..||.+...++. +.|+.+++++... +.+ .++ .+.++++
T Consensus 221 ~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~-L~ga~Pvyl~P~~-~~~Gi~~~i~~~~~~~e~i~~~ 298 (755)
T PRK15029 221 DRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLI-LTGAKPVYMVPSR-NRYGIIGPIYPQEMQPETLQKK 298 (755)
T ss_pred CcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHH-HcCCeEEEecccc-cccCCccCCCccccCHHHHHHH
Confidence 3578999999999999999999999999999999999999999 9999999997432 222 234 8899999
Q ss_pred HHHHHH----cCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCC
Q 019899 88 FNQARK----RGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDK 163 (334)
Q Consensus 88 l~~~~~----~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (334)
+++... .+.+++++++++|+. .|++++ +++|+++|++++++|++||||+....-++.+....++........
T Consensus 299 l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEAhGah~~F~~~~p~~sa~~~~~~~~~ 374 (755)
T PRK15029 299 ISESPLTKDKAGQKPSYCVVTNCTY-DGVCYN---AKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHN 374 (755)
T ss_pred HHhCchhhhccccCceEEEEECCCC-cceeeC---HHHHHHHHHhcCCeEEEECccccccccCccccccccccccccccC
Confidence 876421 223566999999976 699999 999999999999999999999874311222221122200000002
Q ss_pred Cc-EEEEecccccCCCCCceEEEEe-ecCH--HH-HHHHHHhhcccCCChHHHHHHHHhhCChHHHHH-HHHHHHHHHHH
Q 019899 164 DR-VHIIYGLSKDLSLPGFRTGVIY-SYNE--SV-LAAAKKLTRFCSISAPTQRLLISMLSDTKFIQE-YLETNKRRIKK 237 (334)
Q Consensus 164 ~~-~~~~~s~sK~~~~~g~r~g~i~-~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~ 237 (334)
+. ++++.|.||++ +++..|.++ ..+. .+ .++++..-..+..++++-..++.+-....+++. .-.+..++..+
T Consensus 375 Gad~~vvqStHKtL--~alTQaS~LHv~~~~~~id~~r~~~~l~~~qSTSPSY~LmASLD~ar~~m~~~~G~~l~~~~i~ 452 (755)
T PRK15029 375 GPTVFATHSTHKLL--NALSQASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEVID 452 (755)
T ss_pred CCceEEEEchhhcc--cchhhhhhheeCCCccccCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Confidence 33 48889999999 455555543 3222 11 245554444443333333333333222222332 23344445555
Q ss_pred HHHHHHHHHHhC
Q 019899 238 LYDSFVAGLKQL 249 (334)
Q Consensus 238 ~~~~~~~~l~~~ 249 (334)
....+++.+.+.
T Consensus 453 ~~~~~r~~l~~~ 464 (755)
T PRK15029 453 EAVDFRQAMARL 464 (755)
T ss_pred HHHHHHHHHHhc
Confidence 556666666443
No 292
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.80 E-value=1.3e-17 Score=135.83 Aligned_cols=291 Identities=17% Similarity=0.122 Sum_probs=195.1
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITAL 84 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l 84 (334)
|...++++. ..|+.++.++...|+..++.+++.|.|.|+.+...|.+..+.++ ++.. ..+.|+-.+
T Consensus 117 LE~kiAqfh--~rED~ilypscfdANag~feail~pedAvfSDeLNhASIIdGir-Lckr-----------y~h~dv~~l 182 (417)
T KOG1359|consen 117 LESKIAQFH--GREDTILYPSCFDANAGAFEAILTPEDAVFSDELNHASIIDGIR-LCKR-----------YRHVDVFDL 182 (417)
T ss_pred HHHHHHHHh--CCCceEEeccccccchHHHHHhcChhhhhhccccccchhhhhhH-HHhh-----------hccchhHHH
Confidence 344455443 36788899999999999999999999999999999999988887 5541 114577777
Q ss_pred HHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCC
Q 019899 85 DQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKD 164 (334)
Q Consensus 85 ~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (334)
+..+....++ +.++|+-...-...|.+.| +++|++++++||.++++||+|+.+.++..+... .+.. +...+
T Consensus 183 ~~~l~~a~k~--r~klv~TDg~FSMDGdiaP---l~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt-~E~~---~vm~~ 253 (417)
T KOG1359|consen 183 EHCLISACKM--RLKLVVTDGVFSMDGDIAP---LEEISQLAKKYGALLFIDECHATGFFGETGRGT-AEEF---GVMGD 253 (417)
T ss_pred HHHHHHhhhh--eEEEEEecceeccCCCccc---HHHHHHHHHhcCcEEEEeecccceeecCCCCCh-HHHh---CCCCc
Confidence 7776654332 5665544444679999999 999999999999999999999988775433222 2222 12245
Q ss_pred cEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhccc--C--CChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 019899 165 RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFC--S--ISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYD 240 (334)
Q Consensus 165 ~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (334)
.++..++++|.+| |...||+.+ +..+++.++....+| + .++........++.. +... .+...+.+.+.+
T Consensus 254 vdiinsTLgKAlG--ga~GGyttg-p~~li~llrqr~RpylFSnslppavV~~a~ka~dl---lm~s-~~~i~~~~a~~q 326 (417)
T KOG1359|consen 254 VDIINSTLGKALG--GASGGYTTG-PKPLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDL---LMVS-SKEIQSRQANTQ 326 (417)
T ss_pred ceehhhhhhhhhc--CCCCCCccC-ChhHHHHHHhcCCceeecCCCChhhhhhhHHHHHH---HHhh-HHHHHHHHHHHH
Confidence 5667789999995 233499998 788888888665443 2 222222222222221 1111 334456677788
Q ss_pred HHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcC-CCCCCeEEEEecC-CCccc
Q 019899 241 SFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACH-CIEPGWFRCCFTS-LTHED 318 (334)
Q Consensus 241 ~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~~~iRi~~~~-~~~~~ 318 (334)
++++.++..|+.+.....+ .+.+-+.. -+.+....++||+ .||.+..-++.- +.....+|+-++. .+++|
T Consensus 327 rfr~~me~aGftIsg~~hP-I~pv~lGd------a~lA~~~ad~lLk-~Gi~Vigfs~PvVP~gkariRVqiSAaHt~ed 398 (417)
T KOG1359|consen 327 RFREFMEAAGFTISGASHP-ICPVMLGD------ARLASKMADELLK-RGIYVIGFSYPVVPKGKARIRVQISAAHTEED 398 (417)
T ss_pred HHHHHHHhcCceecCCCCC-ccceeccc------HHHHHHHHHHHHh-cCceEEeecCCcCCCCceEEEEEEehhcCHHH
Confidence 9999999889988764322 22122211 1344678889888 799987433221 1234578888875 69999
Q ss_pred HHHHHHHHHHHHHHc
Q 019899 319 IPLVIERIQKVAETC 333 (334)
Q Consensus 319 l~~~l~~l~~~~~~~ 333 (334)
++++++++.++.+.+
T Consensus 399 id~~i~Af~~vgr~~ 413 (417)
T KOG1359|consen 399 IDRLIEAFSEVGRFL 413 (417)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999988764
No 293
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.79 E-value=5.2e-17 Score=136.83 Aligned_cols=141 Identities=16% Similarity=0.213 Sum_probs=119.7
Q ss_pred cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhh---hccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcC
Q 019899 19 QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIR---FRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRG 95 (334)
Q Consensus 19 ~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~---~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~ 95 (334)
.-+.+++++.|+..++..++++||.|+...--|.+....+. ...|.++..++. .|+++++++|++
T Consensus 79 aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~-------~d~~~~~~aI~~----- 146 (426)
T COG2873 79 AALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDP-------DDPENFEAAIDE----- 146 (426)
T ss_pred hhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCC-------CCHHHHHHHhCc-----
Confidence 35678889999999999999999999999998887665544 157999999983 368999999998
Q ss_pred CceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEeccccc
Q 019899 96 VKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKD 175 (334)
Q Consensus 96 ~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~ 175 (334)
++|+|++..-.||.+.+.| +++|.++|+++|+++|+|..+.. +.-+.++ +.+.+++++|++|+
T Consensus 147 -nTkavf~EtigNP~~~v~D---ie~ia~iAh~~gvpliVDNT~at-------pyl~rP~------~hGADIVvHS~TK~ 209 (426)
T COG2873 147 -NTKAVFAETIGNPGLDVLD---IEAIAEIAHRHGVPLIVDNTFAT-------PYLCRPI------EHGADIVVHSATKY 209 (426)
T ss_pred -ccceEEEEeccCCCccccC---HHHHHHHHHHcCCcEEEecCCCc-------ceecchh------hcCCCEEEEeeccc
Confidence 9999999999999999999 99999999999999999998753 1223333 26888999999999
Q ss_pred CCCCCceEEEEee
Q 019899 176 LSLPGFRTGVIYS 188 (334)
Q Consensus 176 ~~~~g~r~g~i~~ 188 (334)
+|..|-.+|-++.
T Consensus 210 igGhGt~iGG~iV 222 (426)
T COG2873 210 IGGHGTAIGGVIV 222 (426)
T ss_pred ccCCccccceEEE
Confidence 9889988888876
No 294
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.79 E-value=8.9e-17 Score=145.61 Aligned_cols=281 Identities=18% Similarity=0.142 Sum_probs=179.1
Q ss_pred CCCcEEEecCcHHHHHHHHHHhc-----CCCCeEEecCCCCCChhhhhhhccCcE------------EEEEeCCCCCCcc
Q 019899 16 DPSQIVLTAGATPAVEILCFCLA-----DHGNALLVPSPYYPGFDRDIRFRTGVE------------LIPVHCRSTDNFA 78 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l~-----~~gd~vl~~~p~~~~~~~~~~~~~g~~------------v~~v~~~~~~~~~ 78 (334)
..+.+++++++++|+..++.... ....+|+....+|.+.........+.. +..+|.
T Consensus 133 ~~~~v~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~------- 205 (442)
T TIGR03372 133 KLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAF------- 205 (442)
T ss_pred CcCEEEEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCC-------
Confidence 34679999999999999987542 134578888888876543322022211 122221
Q ss_pred ccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhh
Q 019899 79 FSITALDQAFNQARKRGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILE 157 (334)
Q Consensus 79 ~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~ 157 (334)
.|.+.+++.+++...++.++.+|++.......|.+. |.+.++++.++|++||+++|+||++.++...|..+ .....
T Consensus 206 ~d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~-a~e~~-- 282 (442)
T TIGR03372 206 GDIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMF-ACEHE-- 282 (442)
T ss_pred CCHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccch-hhhhc--
Confidence 257788888765433344667666654477778866 56679999999999999999999997754444321 11111
Q ss_pred ccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHH----hhcccCCChHHHHHHHHhhCChHHHHHHHHHHH
Q 019899 158 AEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKK----LTRFCSISAPTQRLLISMLSDTKFIQEYLETNK 232 (334)
Q Consensus 158 ~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 232 (334)
+..+| +.+++|.+| .| +++|.+++ ++++.+.+.. +.+.++.|+.+..++.+.++..+ + +...
T Consensus 283 --gv~PD----ivt~gK~lg-~G~~Pigavv~-~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~--~---~~l~ 349 (442)
T TIGR03372 283 --GVQPD----ILCLAKALG-GGVMPIGATIA-TEAVFSVLFDNPFLHTTTFGGNPLACAAALATINELL--E---KNLP 349 (442)
T ss_pred --CCCCC----eeeehhhhc-CCcccceEEEe-cHHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHH--h---ccHH
Confidence 11122 235899998 88 68999998 7888877732 23456678888887777775432 1 1233
Q ss_pred HHHHHHHHHHHHHHHhCC--Cc-c--cCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeE
Q 019899 233 RRIKKLYDSFVAGLKQLG--IR-C--SESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWF 307 (334)
Q Consensus 233 ~~~~~~~~~~~~~l~~~g--~~-~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~i 307 (334)
++.+++-+++.+.|+++. .. . .....|.++.+++... .....+...+++ +||.+.+... .++.+
T Consensus 350 ~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~Gl~~giel~~~------~~~~~i~~~l~~-~Gvl~~~~~~----~~~~l 418 (442)
T TIGR03372 350 AQAAIKGDFLLDGFQQLAAEYPDLIIEARGKGLLMAIEFRDN------EIGYAFAKELFQ-QNILVAGTLN----NAKSI 418 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCceEEEecceEEEEEEeCCh------HHHHHHHHHHHH-CCcEEeecCC----CCCEE
Confidence 445555566666665531 11 1 1123466666777542 123567777555 8999865321 13689
Q ss_pred EEEecC-CCcccHHHHHHHHHHHH
Q 019899 308 RCCFTS-LTHEDIPLVIERIQKVA 330 (334)
Q Consensus 308 Ri~~~~-~~~~~l~~~l~~l~~~~ 330 (334)
|+.++. +++++++++++++.+++
T Consensus 419 r~~Ppl~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 419 RIEPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred EEECCcccCHHHHHHHHHHHHHhC
Confidence 998774 69999999999998763
No 295
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.79 E-value=1.6e-16 Score=137.58 Aligned_cols=197 Identities=15% Similarity=0.150 Sum_probs=143.1
Q ss_pred CCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhh---ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 17 PSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRF---RTGVELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~---~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
..++++++++..|+..++..+++.|++|+.....|......++. ..|.+...+++ -+++++++++++
T Consensus 92 a~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~-------~~~~~~~~~i~~--- 161 (409)
T KOG0053|consen 92 AAHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDV-------DDLKKILKAIKE--- 161 (409)
T ss_pred CceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeech-------hhHHHHHHhhcc---
Confidence 44699999999999999999999999999999999998877662 35777777664 257778888876
Q ss_pred cCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEeccc
Q 019899 94 RGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLS 173 (334)
Q Consensus 94 ~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s 173 (334)
++++|++.+|.||+..+.| ++++.++|+++|++|++|+.++.. ....++ + .+.+++++|.+
T Consensus 162 ---~t~~V~~ESPsNPll~v~D---I~~l~~la~~~g~~vvVDnTf~~p-------~~~~pL-~-----lGADIV~hSaT 222 (409)
T KOG0053|consen 162 ---NTKAVFLESPSNPLLKVPD---IEKLARLAHKYGFLVVVDNTFGSP-------YNQDPL-P-----LGADIVVHSAT 222 (409)
T ss_pred ---CceEEEEECCCCCcccccc---HHHHHHHHhhCCCEEEEeCCcCcc-------cccChh-h-----cCCCEEEEeee
Confidence 7999999999999999999 999999999999999999998641 122222 1 57889999999
Q ss_pred ccCC-CCCceEEEEeecCHHHHHHHHHhhcc--cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 019899 174 KDLS-LPGFRTGVIYSYNESVLAAAKKLTRF--CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL 249 (334)
Q Consensus 174 K~~~-~~g~r~g~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 249 (334)
|.++ -+.+=.|.++...+++.++++..... +..++.....+.+-++.. .-+.++..+++..+.+.|+..
T Consensus 223 Kyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~lg~~~~p~~~~ll~Rglktl-------~lRi~~~~ena~~~A~~Le~~ 294 (409)
T KOG0053|consen 223 KYIGGHSDVIGGSVVLNSEELASRLKFLQEDLGWCEDPFDLFLLSRGLKTL-------HLRINKHSENALKIALLLEAH 294 (409)
T ss_pred eeecCCcceeeeEEecCcHHHHHHHHHHHHHhcCCCCHHHHHHHhcCcchh-------hhhHHHHHHHHHHHHHHhhhC
Confidence 9994 33455566666458888888776544 344544444443333332 223334445555555555553
No 296
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.79 E-value=2.3e-16 Score=144.02 Aligned_cols=289 Identities=15% Similarity=0.090 Sum_probs=173.7
Q ss_pred EEEecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChhhhhhhccC------------cEEEEEeCCCCCCccc------
Q 019899 20 IVLTAGATPAVEILCFCLA--DHGNALLVPSPYYPGFDRDIRFRTG------------VELIPVHCRSTDNFAF------ 79 (334)
Q Consensus 20 i~~~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~~g------------~~v~~v~~~~~~~~~~------ 79 (334)
+++++++++|+..++.... ....+|+....+|.+......-..| ..+..++.+ +.+..
T Consensus 105 ~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 182 (442)
T TIGR00709 105 QFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYP--HEYRCPFGIGG 182 (442)
T ss_pred EEeCCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCC--ccccccccCCc
Confidence 4556899999999987642 3346788888888776543331222 112333321 11111
Q ss_pred --cHHH----HHHHHHHHHHcCCceeEEEEeCCCCCccc-CCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchh
Q 019899 80 --SITA----LDQAFNQARKRGVKVRGILICNPANPVGN-IIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSM 152 (334)
Q Consensus 80 --~~~~----l~~~l~~~~~~~~~~~~i~~~~p~nptG~-~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~ 152 (334)
+.+. +++.+++......++.++++...++..|. ..|.+.++++.++|++||+++|.||++.+|.+.|..+ ..
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-a~ 261 (442)
T TIGR00709 183 EAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMF-AF 261 (442)
T ss_pred hhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchh-HH
Confidence 1222 23333321112235676766655655565 5788899999999999999999999999887666432 22
Q ss_pred hhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHH--hhcccCCChHHHHHHHHhhCChHHHHHHHHH
Q 019899 153 AEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKK--LTRFCSISAPTQRLLISMLSDTKFIQEYLET 230 (334)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 230 (334)
.... ..+| ++ +++|.++ .|+++|++++ ++++ +.+.. +..+++.|+..+.++.+.++..+ + ..
T Consensus 262 ~~~g----v~PD--iv--~~gK~l~-~G~Pigav~~-~~~~-~~~~~~~~~~T~~gnpla~aaa~a~L~~i~--~---~~ 325 (442)
T TIGR00709 262 EHAG----IEPD--FV--VMSKAVG-GGLPLAVLLI-APEF-DAWQPAGHTGTFRGNQLAMVTGTEALNYWK--D---DN 325 (442)
T ss_pred HHcC----CCCc--EE--EEccccc-CCcccEEEEE-chHH-hccCCCcCCCCCCcCHHHHHHHHHHHHHHH--h---cC
Confidence 2221 1122 22 3899998 6999999998 5554 44421 23556788999888888875422 1 12
Q ss_pred HHHHHHHHHHHHHHHHHhC----CCcccCCCceeEEeeecCCcCCC------C--ChhhHHHHHHHHHHhcCeEEcCCCC
Q 019899 231 NKRRIKKLYDSFVAGLKQL----GIRCSESSAGLYCWADMSGLIPS------Y--SEKGELELWDKLLNIAKINVTPGSA 298 (334)
Q Consensus 231 ~~~~~~~~~~~~~~~l~~~----g~~~~~~~~g~~~~~~~~~~~~~------~--~~~~~~~~~~~ll~~~gi~v~~g~~ 298 (334)
..++++++.+++.+.|+++ ++......-|.+..+++.+.... . .......+...+ .++|+.+.+...
T Consensus 326 l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gvl~~~~~~ 404 (442)
T TIGR00709 326 LAQNAQERGERITSFLDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGAC-FENGLLLETGGR 404 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHH-HHCCeEEeecCC
Confidence 3445555666666666543 22111222355666666432110 0 011233455554 458999876432
Q ss_pred cCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 299 CHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 299 ~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
..+.+|+..+. +|+++++++++++.+++++
T Consensus 405 ----~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~ 435 (442)
T TIGR00709 405 ----EGEVFRLLCPITIDQEECEEGISRFKQAVEE 435 (442)
T ss_pred ----CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 14678988774 6999999999999998865
No 297
>PRK07678 aminotransferase; Validated
Probab=99.79 E-value=1.4e-16 Score=145.57 Aligned_cols=298 Identities=12% Similarity=0.127 Sum_probs=177.0
Q ss_pred CcEEEecCcHHHHHHHHHHhcC--------CCCeEEecCCCCCChhhhhhhccCc------------EEEEEeCCCCCCc
Q 019899 18 SQIVLTAGATPAVEILCFCLAD--------HGNALLVPSPYYPGFDRDIRFRTGV------------ELIPVHCRSTDNF 77 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l~~--------~gd~vl~~~p~~~~~~~~~~~~~g~------------~v~~v~~~~~~~~ 77 (334)
+.+++++++++|+..++..... ...+|+....+|.+......-..|. .+..+|.++....
T Consensus 106 ~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (451)
T PRK07678 106 YVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRM 185 (451)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccc
Confidence 5899999999999998876421 2357888888887654322202221 1222332111100
Q ss_pred -------ccc---HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEEEEeccccccccCC
Q 019899 78 -------AFS---ITALDQAFNQARKRGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHVISDEIYGGSIFGN 146 (334)
Q Consensus 78 -------~~~---~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~ 146 (334)
..+ ++.+++.++. ....++.+|++...+...|.+. +.+.++++.++|++||+++|+||++.+|...|
T Consensus 186 ~~~~~~~~~~~~~~~~l~~~~~~--~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG 263 (451)
T PRK07678 186 PGIESEDIYDLECVKEIDRVMTW--ELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTG 263 (451)
T ss_pred cccCChHHHHHHHHHHHHHHHHh--cCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCc
Confidence 011 2234455542 1223566666654466677765 56679999999999999999999998765544
Q ss_pred CCcchhhhhhhccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHH--------hhcccCCChHHHHHHHHh
Q 019899 147 EEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKK--------LTRFCSISAPTQRLLISM 217 (334)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~ 217 (334)
..+ ..... +..+| +.+++|.+| .| +++|.+++ ++++.+.+.. +..+++.|+.+..++.+.
T Consensus 264 ~~~-~~~~~----gv~PD----ivt~gK~lg-gG~~Pi~av~~-~~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~ 332 (451)
T PRK07678 264 KAF-GFMNY----GVKPD----IITMAKGIT-SAYLPLSATAV-KKEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKN 332 (451)
T ss_pred hhH-HHHhc----CCCCC----EEEeecccc-cCCcceeEEEE-cHHHHHHHhccCcccccccCCCCCcCHHHHHHHHHH
Confidence 321 11111 11122 336899998 77 69999998 8888888753 234567788888887777
Q ss_pred hCChHHHHHHHHHHHHHHHHHHHHHHHHHHh----CCCcccCCCceeEEeeecCCcCCCC---ChhhHHHHHHHHHHhcC
Q 019899 218 LSDTKFIQEYLETNKRRIKKLYDSFVAGLKQ----LGIRCSESSAGLYCWADMSGLIPSY---SEKGELELWDKLLNIAK 290 (334)
Q Consensus 218 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~g~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~ll~~~g 290 (334)
++..+ ++ ...++++++-+++.+.|++ +++......-|.+..+.+....... .......+...++ ++|
T Consensus 333 l~~l~--~~---~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~-~~G 406 (451)
T PRK07678 333 LEIME--NE---NLIERSAQLGELLLEQLKEELGEHPLVGDIRGKGLLVGIELVNDKETKEPADNDKVASVVAACK-EKG 406 (451)
T ss_pred HHHHH--hC---CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEeeceEEEEEEecCCcccCcCchHHHHHHHHHHH-HCC
Confidence 75432 11 2333444455555555543 3332212223555556664221110 1122345666644 489
Q ss_pred eEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHHcC
Q 019899 291 INVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAETCK 334 (334)
Q Consensus 291 i~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~~ 334 (334)
|.+.+.....+...+.+|++... +|++|++++++++.+++++.+
T Consensus 407 v~~~~~g~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~~ 451 (451)
T PRK07678 407 LIIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALERIK 451 (451)
T ss_pred cEEeecCccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhcC
Confidence 99876322111224679999874 599999999999999998764
No 298
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.79 E-value=5.3e-17 Score=149.44 Aligned_cols=291 Identities=16% Similarity=0.172 Sum_probs=182.6
Q ss_pred cEEEecCcHHHHHHHHHHhc----C----------------------CCCeEEecCCCCCChhhhhhhccCc---EEEEE
Q 019899 19 QIVLTAGATPAVEILCFCLA----D----------------------HGNALLVPSPYYPGFDRDIRFRTGV---ELIPV 69 (334)
Q Consensus 19 ~i~~~~g~~~~~~~~~~~l~----~----------------------~gd~vl~~~p~~~~~~~~~~~~~g~---~v~~v 69 (334)
.=++|+|+|+++..++.+.. . ++..|+++.-.|++....+. ..|. +++.+
T Consensus 161 ~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~-~lglg~~~v~~v 239 (522)
T TIGR03799 161 LGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAAD-VLGIGRDNLIAI 239 (522)
T ss_pred CeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHHH-HcCCCcccEEEE
Confidence 35678999999887765531 1 23578889999999998888 7787 78899
Q ss_pred eCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCc
Q 019899 70 HCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEF 149 (334)
Q Consensus 70 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~ 149 (334)
|++ +++.+|+++|+++|++....+.++-+|+.+..++.||.+.| +++|.++|+++|+|+++|.+|+.......
T Consensus 240 p~d--~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDp---l~eIa~i~~~~g~~lHVDaA~gg~~~~~~-- 312 (522)
T TIGR03799 240 KTD--ANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDP---LDEMADIAQELGCHFHVDAAWGGATLLSN-- 312 (522)
T ss_pred EeC--CCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCC---HHHHHHHHHHcCCeEEEEchhhhHHHhCH--
Confidence 983 55689999999999866555444554555566889999999 99999999999999999999986332111
Q ss_pred chhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc-------------cCCChHHHH-HHH
Q 019899 150 VSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF-------------CSISAPTQR-LLI 215 (334)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~-------------~~~~~~~~~-~~~ 215 (334)
....+.. ++ ...+.+..+.+|+++ ....+|+++.+++.+.+.+.....+ +..+..... .+.
T Consensus 313 -~~r~~l~--gl-e~aDSit~d~HK~l~-~P~g~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw 387 (522)
T TIGR03799 313 -TYRHLLK--GI-ERADSVTIDAHKQLY-VPMGAGMVLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVY 387 (522)
T ss_pred -HHHHHhc--Cc-hhCCEEEEChhhcCC-cCcccEEEEEeCHHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHH
Confidence 1111111 11 244567789999875 4466899988777776655432111 111211111 122
Q ss_pred HhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCC-ceeEEeeecCCcCCCC----C-----------hhhH
Q 019899 216 SMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSESS-AGLYCWADMSGLIPSY----S-----------EKGE 278 (334)
Q Consensus 216 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~-~g~~~~~~~~~~~~~~----~-----------~~~~ 278 (334)
..++.. ....++++.++..++++++.+.|++. ++++..+. -+.++|-..|...... . ..--
T Consensus 388 ~aL~~l--G~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln 465 (522)
T TIGR03799 388 AGLHII--GRKGYELLIDQSIEKAKYFADLIQQQPDFELVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLT 465 (522)
T ss_pred HHHHHH--hHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHH
Confidence 222221 23456788888999999999999887 88877553 4444433334322110 0 0011
Q ss_pred HHHHHHHHHhcCeEEcCCCCcC-----CCCCCeEEEEecC--CCcccHHHHHHH
Q 019899 279 LELWDKLLNIAKINVTPGSACH-----CIEPGWFRCCFTS--LTHEDIPLVIER 325 (334)
Q Consensus 279 ~~~~~~ll~~~gi~v~~g~~~~-----~~~~~~iRi~~~~--~~~~~l~~~l~~ 325 (334)
..+.++ +.+.|.......... ......+|+++++ +++++++.+++.
T Consensus 466 ~~i~~~-~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 466 KFIQKR-QREAGKSFVSRTRLTPAQYDHQPTVVFRVVLANPLTTHEILQDILDE 518 (522)
T ss_pred HHHHHH-HHhcCCEEEEEEEecccccCCCCcEEEEEEecCCCCCHHHHHHHHHH
Confidence 234444 334565433211111 1112469999885 578888887765
No 299
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.79 E-value=3.8e-16 Score=142.48 Aligned_cols=290 Identities=12% Similarity=0.107 Sum_probs=174.7
Q ss_pred CcEEEecCcHHHHHHHHHHh--cCCCCeEEecCCCCCChhh-hhhhccC-------------cEEEEEeCCCCCC--c-c
Q 019899 18 SQIVLTAGATPAVEILCFCL--ADHGNALLVPSPYYPGFDR-DIRFRTG-------------VELIPVHCRSTDN--F-A 78 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l--~~~gd~vl~~~p~~~~~~~-~~~~~~g-------------~~v~~v~~~~~~~--~-~ 78 (334)
+.+++++++++|+..++... .....+|+....+|.+... .+. ..+ ..+..+|.++... + .
T Consensus 104 ~~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als-~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 182 (445)
T PRK08593 104 KRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLS-MSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEE 182 (445)
T ss_pred CEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHh-hcCCCcccccCCCCCCCCcEEeCCCccccccccC
Confidence 58999999999999998753 2234568877777776532 222 211 1133344321100 0 0
Q ss_pred ccH-------HHHHHHHHHHHHcCCceeEEEEeCCCCCcccC-CCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcc
Q 019899 79 FSI-------TALDQAFNQARKRGVKVRGILICNPANPVGNI-IPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFV 150 (334)
Q Consensus 79 ~~~-------~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~ 150 (334)
.+. +++++.+++.. ...++.+|++...++..|.+ .|.+.++++.++|++||+++|+||++.++...|..+.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~-~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a 261 (445)
T PRK08593 183 PDANFVEEYLAPLKEMFEKYL-PADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSS 261 (445)
T ss_pred CcHHHHHHHHHHHHHHHHhhc-CCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHH
Confidence 111 23333332210 12357766666557777886 6788899999999999999999999987654443211
Q ss_pred hhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh--hcccCCChHHHHHHHHhhCChHHHHHHH
Q 019899 151 SMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL--TRFCSISAPTQRLLISMLSDTKFIQEYL 228 (334)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 228 (334)
.... +..++ +.+++|.++ .|+++|++++ ++++.+.+... ...++.+++...++.+.++..+ +
T Consensus 262 -~~~~----gv~pD----i~t~gK~l~-~G~p~gav~~-~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~---~-- 325 (445)
T PRK08593 262 -ISHF----NITPD----LMSFGKSLA-GGMPMSAIVG-RKEIMESLEAPAHLFTTGANPVSCAAALATIDMIE---D-- 325 (445)
T ss_pred -HHhc----CCCCC----Eeeeccccc-CCcccEEEEE-cHHHHhhhccCCCCCCCCCCHHHHHHHHHHHHHHH---h--
Confidence 1111 11122 447899998 8899999998 88888887532 2345677777777777765432 1
Q ss_pred HHHHHHHHHHHHHHHHHHHhC----CCcccCCCceeEEeeecCCcC--CCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC
Q 019899 229 ETNKRRIKKLYDSFVAGLKQL----GIRCSESSAGLYCWADMSGLI--PSYSEKGELELWDKLLNIAKINVTPGSACHCI 302 (334)
Q Consensus 229 ~~~~~~~~~~~~~~~~~l~~~----g~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~ 302 (334)
....++++++.+++.+.|+++ ++......-|.+..+.+.... ..........+...++ ++||.+.+..
T Consensus 326 ~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~-~~Gv~~~~~~----- 399 (445)
T PRK08593 326 ESLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCF-EHGVVIIAVA----- 399 (445)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHH-HCCeEEeccC-----
Confidence 133445555556666666543 221111223444445553211 1111122345777754 4899986532
Q ss_pred CCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 303 EPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 303 ~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
.+.+|+.++. ++++|++.+++++.+++++
T Consensus 400 -~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 429 (445)
T PRK08593 400 -GNVLRFQPPLVITYEQLDTALNTIEQAFTA 429 (445)
T ss_pred -CCEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 3579998875 6999999999999998865
No 300
>PRK06541 hypothetical protein; Provisional
Probab=99.79 E-value=1.5e-16 Score=145.51 Aligned_cols=293 Identities=13% Similarity=0.112 Sum_probs=177.3
Q ss_pred CCCcEEEecCcHHHHHHHHHHhcC--------CCCeEEecCCCCCChhhhhhhccCc------------EEEEEeCCCCC
Q 019899 16 DPSQIVLTAGATPAVEILCFCLAD--------HGNALLVPSPYYPGFDRDIRFRTGV------------ELIPVHCRSTD 75 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l~~--------~gd~vl~~~p~~~~~~~~~~~~~g~------------~v~~v~~~~~~ 75 (334)
+.+.+++++++++|+..++..... ...+|+....+|.+......-..|. .+..+|.++..
T Consensus 111 ~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~ 190 (460)
T PRK06541 111 DLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFY 190 (460)
T ss_pred CcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccc
Confidence 346899999999999988775421 2467888887777654322202221 12233321100
Q ss_pred C---cccc--------HHHHHHHHHHHHHcCCceeEEEEeCC-CCCcccCCC-HHHHHHHHHHHHhcCcEEEEecccccc
Q 019899 76 N---FAFS--------ITALDQAFNQARKRGVKVRGILICNP-ANPVGNIIP-RETLYELLDFAREKNIHVISDEIYGGS 142 (334)
Q Consensus 76 ~---~~~~--------~~~l~~~l~~~~~~~~~~~~i~~~~p-~nptG~~~~-~~~l~~i~~~~~~~~~~vi~D~~~~~~ 142 (334)
. +..+ ++.+++.++.. +.+..+.+++.| +++.|.+.+ .+.++++.++|++||+++|+||++.+|
T Consensus 191 ~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGf 267 (460)
T PRK06541 191 RAPELGDDPEAFGRWAADRIEEAIEFE---GPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAF 267 (460)
T ss_pred cccccCCCHHHHHHHHHHHHHHHHHhc---CCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCC
Confidence 0 1112 34566665431 123344566667 889999875 778999999999999999999999766
Q ss_pred ccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCCc-eEEEEeecCHHHHHHHHHh------hcccCCChHHHHHHH
Q 019899 143 IFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGF-RTGVIYSYNESVLAAAKKL------TRFCSISAPTQRLLI 215 (334)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~-r~g~i~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 215 (334)
...|..+. .... +..++ +.+++|.++ .|+ ++|++++ ++++.+.+... ...++.+++...++.
T Consensus 268 GR~G~~~a-~~~~----gv~PD----ivt~gK~l~-~G~~pigav~~-~~~i~~~~~~~~~~~~~~~T~~gnp~~~aaal 336 (460)
T PRK06541 268 GRLGEMFG-CERF----GYVPD----IITCAKGIT-SGYSPLGAMIA-SDRLFEPFLDGPTMFLHGYTFGGHPVSAAVAL 336 (460)
T ss_pred CcCchhhh-hhhc----CCCCC----EEEeccccc-CCccceeEEEE-cHHHHHHhhcCCCccccCCCCCCCHHHHHHHH
Confidence 43333221 1111 11122 235899998 886 9999998 78887777532 124456677766666
Q ss_pred HhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCccc--CCCceeEEeeecCCcCCCC----Ch---h-hHHHHHHH
Q 019899 216 SMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCS--ESSAGLYCWADMSGLIPSY----SE---K-GELELWDK 284 (334)
Q Consensus 216 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~--~~~~g~~~~~~~~~~~~~~----~~---~-~~~~~~~~ 284 (334)
+.++..+ + ....++++++.+++.+.|+++ ...+. ....|.+..+++....... .. . ....+...
T Consensus 337 a~l~~l~--~---~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (460)
T PRK06541 337 ANLDIFE--R---EGLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPA 411 (460)
T ss_pred HHHHHHH--h---ccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHH
Confidence 6654321 1 234566777778888888765 22221 1123555556664321100 00 0 11234556
Q ss_pred HHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 285 LLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 285 ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
++ ++||.+.+.. . ..+.+|++... ++++|++++++++.+++++
T Consensus 412 l~-~~Gi~~~~~~-~---g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~ 455 (460)
T PRK06541 412 LF-EAGLYCRADD-R---GDPVVQLAPPLISGQEEFDEIEQILRSVLTE 455 (460)
T ss_pred HH-hCCeEEEecC-C---CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 44 5899997632 1 24679999874 6999999999999999865
No 301
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.79 E-value=1.4e-17 Score=148.14 Aligned_cols=280 Identities=14% Similarity=0.083 Sum_probs=176.9
Q ss_pred hhhhcCCCCCCCC-cEEEe-cCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhc--cCcEEEEEeCCCCCCccccH
Q 019899 6 SQVLGQAVSFDPS-QIVLT-AGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFR--TGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 6 ~~~~~~~~~~~~~-~i~~~-~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~--~g~~v~~v~~~~~~~~~~~~ 81 (334)
++.+...++++++ +|+++ .++|.+++.++.++..+ +.+++..-.|..-....... .+.++..+++. .+..++.
T Consensus 47 r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~--~~~~~~~ 123 (361)
T TIGR01366 47 REGLAELFSLPDGYEVILGNGGATAFWDAATFGLIEK-KSLHLSFGEFSSKFAKAVKLAPWLGEPIIVTAD--PGSAPEP 123 (361)
T ss_pred HHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcccc-cccEEecCHHHHHHHHHHHhhhccCCceEEecC--CCCCCCC
Confidence 4445555666444 78886 55999999999998743 34444455555433332212 12366666653 2333332
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
.+. .++++|.+++..|.||...| +++| ++++|+++++|.+.+. +....++.
T Consensus 124 -----~~~------~~~~lV~~~h~et~tG~~~p---i~~I---~~~~g~~~iVDavqs~----g~~~idv~-------- 174 (361)
T TIGR01366 124 -----QAD------PGVDVIAWAHNETSTGVAVP---VRRP---EGSDDALVVIDATSGA----GGLPVDIA-------- 174 (361)
T ss_pred -----ccC------CCCCEEEEcccCCccceecc---cccc---cccCCCeEEEEcCccc----cCCCCCHH--------
Confidence 222 37999999999999999999 5555 4789999999999875 33334443
Q ss_pred CCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh-----------------------cccCCChHHHHHHHHhh
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT-----------------------RFCSISAPTQRLLISML 218 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~l 218 (334)
..+++++|.+|.+|.+| .++.++. +++..++++... .+++.+.....++.+++
T Consensus 175 --~~D~~~~s~~K~lg~~~-Gl~~~~~-s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al 250 (361)
T TIGR01366 175 --ETDVYYFAPQKNFASDG-GLWLAIM-SPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQI 250 (361)
T ss_pred --HCCEEEEEchhhcCCCC-ceEEEEE-CHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHH
Confidence 23578899999998664 3666666 666665554210 01222223333444444
Q ss_pred CChHHHHHH--HHHHHHHHHHHHHHHHHHHHhCC-CcccCC-C---ceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCe
Q 019899 219 SDTKFIQEY--LETNKRRIKKLYDSFVAGLKQLG-IRCSES-S---AGLYCWADMSGLIPSYSEKGELELWDKLLNIAKI 291 (334)
Q Consensus 219 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~g-~~~~~~-~---~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi 291 (334)
+. +.+. ++...++.++..+++.+.+.+.+ ++.... . ......+.+++.. +..++...| +++||
T Consensus 251 ~~---l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~~g~------~~~~v~~~L-~~~gI 320 (361)
T TIGR01366 251 DW---MNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFVDDI------DAATVAKIL-RANGI 320 (361)
T ss_pred HH---HHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECCCcc------CHHHHHHHH-HHCCC
Confidence 32 2322 56677888899999999999986 444421 1 1111223444322 345677774 66899
Q ss_pred EEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 292 NVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 292 ~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
.+.++... ..+..+|+|+.. .|++|++++++.|+++++++
T Consensus 321 ~i~~~~~~--l~~~~vRis~~~~~t~~di~~l~~al~~~~~~~ 361 (361)
T TIGR01366 321 VDTEPYRK--LGRNQLRVAMFPAIDPDDVEALTECVDWVVERL 361 (361)
T ss_pred eeccCccc--cCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 99776422 235689999885 69999999999999998764
No 302
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.79 E-value=3.1e-16 Score=142.87 Aligned_cols=293 Identities=14% Similarity=0.111 Sum_probs=175.2
Q ss_pred CCcEEEecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChhhhhhhccC-------------cEEEEEeCCCCCC--cc-
Q 019899 17 PSQIVLTAGATPAVEILCFCLA--DHGNALLVPSPYYPGFDRDIRFRTG-------------VELIPVHCRSTDN--FA- 78 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~~g-------------~~v~~v~~~~~~~--~~- 78 (334)
.+.+++++++++|+..++.... ....+|+....+|.+......-..+ ..+..++.++... ++
T Consensus 115 ~~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (441)
T PRK05769 115 EKKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGI 194 (441)
T ss_pred CCEEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccC
Confidence 3689999999999999887542 2346788888878765432210211 1123333311100 00
Q ss_pred c--------cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEEEEeccccccccCCCCc
Q 019899 79 F--------SITALDQAFNQARKRGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHVISDEIYGGSIFGNEEF 149 (334)
Q Consensus 79 ~--------~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~ 149 (334)
- +++.+++.+-+......++.+|++.......|.+. +.+.++++.++|++||+++|+||++.++...|..+
T Consensus 195 ~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~ 274 (441)
T PRK05769 195 ENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMF 274 (441)
T ss_pred CchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccccee
Confidence 0 12234442211101123566555554466778765 56679999999999999999999998765545322
Q ss_pred chhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHH-HhhcccCCChHHHHHHHHhhCChHHHHHHH
Q 019899 150 VSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAK-KLTRFCSISAPTQRLLISMLSDTKFIQEYL 228 (334)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 228 (334)
. .... +..++ + .+++|.++ .|+++|++++ ++++.+.+. .+...++.+++.+.++.+.++.. ++
T Consensus 275 a-~~~~----gv~pD--i--vt~~K~l~-~G~p~gav~~-~~~i~~~~~~~~~~T~~g~p~~~aaa~a~L~~l---~~-- 338 (441)
T PRK05769 275 A-IEHF----GVEPD--I--ITLAKAIA-GGLPLGAVIG-RAELMFLPPGSHANTFGGNPVAAAAALATLEEL---EE-- 338 (441)
T ss_pred h-hhcc----CCCCC--E--EEEccccc-CCcccEEEEE-ehhhhhcCCCCCCCCCCcCHHHHHHHHHHHHHH---HH--
Confidence 1 1111 11122 2 25899998 8899999998 677764332 13345566888877777776542 22
Q ss_pred HHHHHHHHHHHHHHHHHHHhCC--Cccc--CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCC
Q 019899 229 ETNKRRIKKLYDSFVAGLKQLG--IRCS--ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEP 304 (334)
Q Consensus 229 ~~~~~~~~~~~~~~~~~l~~~g--~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~ 304 (334)
...++++++.+++.+.|++.. ..+. ...-|.++.+.+..............+...++ ++||.+.+.. .
T Consensus 339 -~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~Gil~~~~~------~ 410 (441)
T PRK05769 339 -GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLGLMIGVELVKDRKEPDPKLRDKVLYEAF-KRGLLLLGAG------K 410 (441)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEeccCCccccHHHHHHHHHHHH-hCCcEEecCC------C
Confidence 445566666777777776542 2222 12235556566643211111122345666644 4899986532 3
Q ss_pred CeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 305 GWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 305 ~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
+.+|++.+. ++++|++++++++.+++++.
T Consensus 411 ~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 411 SAIRIIPPLIITEEEADIGLEILEEAIKEL 440 (441)
T ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 679999874 59999999999999998753
No 303
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.79 E-value=2.3e-16 Score=143.93 Aligned_cols=299 Identities=16% Similarity=0.119 Sum_probs=186.2
Q ss_pred hhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc--C--C-CCeEEecCCCCCChhhhhhhccCcEEEE---EeCCCCCCc-
Q 019899 7 QVLGQAVSFDPSQIVLTAGATPAVEILCFCLA--D--H-GNALLVPSPYYPGFDRDIRFRTGVELIP---VHCRSTDNF- 77 (334)
Q Consensus 7 ~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~--~--~-gd~vl~~~p~~~~~~~~~~~~~g~~v~~---v~~~~~~~~- 77 (334)
+++....+.+.+.+++++++++|+..++.... . + ..+|+....+|.+......-..+..... .|..+ +-.
T Consensus 131 e~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~-~~~~ 209 (459)
T PRK11522 131 KTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLP-GFRH 209 (459)
T ss_pred HHHHHhCCCCCCEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCC-CCcc
Confidence 33333333344689999999999999987642 1 2 3468888888877544322022221111 11100 000
Q ss_pred --cccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhh
Q 019899 78 --AFSITALDQAFNQARKRGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAE 154 (334)
Q Consensus 78 --~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~ 154 (334)
-.|.+++++.++.....+.++.++++...+...|.+. |.+.++++.++|++||+++|+||++.++...|..+. ...
T Consensus 210 ~~~~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a-~e~ 288 (459)
T PRK11522 210 VPFGNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFA-CEH 288 (459)
T ss_pred cCCCCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhh-hhc
Confidence 1267888888875433344566666655577778865 566799999999999999999999977544443211 111
Q ss_pred hhhccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHH----hhcccCCChHHHHHHHHhhCChHHHHHHHH
Q 019899 155 ILEAEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKK----LTRFCSISAPTQRLLISMLSDTKFIQEYLE 229 (334)
Q Consensus 155 ~~~~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 229 (334)
. +..+| +.+++|.+| .| +++|.+++ .+++.+.+.. +...++.|+.+..++.+.++..+ + +
T Consensus 289 ~----gv~PD----ivt~gK~lg-gG~~Pigav~~-~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~---~--~ 353 (459)
T PRK11522 289 E----NVQPD----ILCLAKALG-GGVMPIGATIA-TEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLL---E--Q 353 (459)
T ss_pred c----CCCCC----EEEechhhh-CCCccceeEEE-cHHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHh---c--c
Confidence 1 11122 337899998 78 68999998 7787776632 23445668888777777765432 1 2
Q ss_pred HHHHHHHHHHHHHHHHHHhC--CCc-cc--CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCC
Q 019899 230 TNKRRIKKLYDSFVAGLKQL--GIR-CS--ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEP 304 (334)
Q Consensus 230 ~~~~~~~~~~~~~~~~l~~~--g~~-~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~ 304 (334)
...++++++-+++.+.|+++ ... .. ....|.++.+.+... .....+...+++ +||.+.+... ..
T Consensus 354 ~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~~~------~~~~~i~~~l~~-~Gvl~~~~~~----~~ 422 (459)
T PRK11522 354 NLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDN------EIGYNFASEMFR-QRVLVAGTLN----NA 422 (459)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeEEEEEecCc------hHHHHHHHHHHH-CCeEEEecCC----CC
Confidence 34456666667777777664 122 11 112356666777542 123467777555 8999875321 24
Q ss_pred CeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 305 GWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 305 ~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
+.+|+.++. ++++|+++++++|.+++++.
T Consensus 423 ~~lr~~Ppl~~t~~~id~~l~~l~~~l~~~ 452 (459)
T PRK11522 423 KTIRIEPPLTLTIEQCEQVLKAARKALAAM 452 (459)
T ss_pred CEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 689999874 69999999999999988653
No 304
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.78 E-value=1.6e-18 Score=153.08 Aligned_cols=220 Identities=14% Similarity=0.200 Sum_probs=137.3
Q ss_pred CCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCc----cccH-----HHHHHH
Q 019899 17 PSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNF----AFSI-----TALDQA 87 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~----~~~~-----~~l~~~ 87 (334)
....++++|+|.++.+++.+++++||+|+++..||.+...++. +.|+.+++++.. .+.+ .++. +.++++
T Consensus 82 d~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~ali-l~ga~Pvyi~p~-~~~~gi~~~i~~~~~~~~~i~~~ 159 (417)
T PF01276_consen 82 DKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALI-LSGAIPVYIPPE-DNEYGIIGGISPDEFNEEDIEEA 159 (417)
T ss_dssp SEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHH-HHTEEEEEEEEE-E-TTS-BEEB-GGGGSHHHHHHH
T ss_pred CeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHH-HcCCeEEEecCC-ccccCCccCCChhhhhHHHHHHH
Confidence 3468889999999999999999999999999999999999998 999999999864 2332 3466 899999
Q ss_pred HHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccc-cCCCCcchhhhhhhccccCCCcE
Q 019899 88 FNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSI-FGNEEFVSMAEILEAEEVDKDRV 166 (334)
Q Consensus 88 l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 166 (334)
|++.... +.++++++++|+. .|++++ +++|+++|++++++|++||||+... |. .-+.+...+..+ ..+...+
T Consensus 160 l~~~p~~-k~~~~vvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEAhGah~~F~-~lp~~a~~~gad-~~~~~~~ 232 (417)
T PF01276_consen 160 LKEHPDA-KAPRLVVLTSPTY-YGVCYD---IKEIAEICHKHGIPLLVDEAHGAHFGFH-PLPRSALALGAD-RPNDPGI 232 (417)
T ss_dssp HHHCTTC-HCESEEEEESS-T-TSEEE----HHHHHHHHCCTECEEEEE-TT-TTGGCS-GGGTTCSSTTSS--CTSBEE
T ss_pred HHhCccc-cCceEEEEeCCCC-CeEEEC---HHHHHHHhcccCCEEEEEccccccccCC-CCccchhhccCc-cccccce
Confidence 9874211 1255699999976 699999 9999999999999999999998632 21 111111112111 1123455
Q ss_pred EEEecccccCCCCCce-EEEEeecCHH--HHHHHHHhhcccCCChHHHHHHHHhhCChHHH-HHHHHHHHHHHHHHHHHH
Q 019899 167 HIIYGLSKDLSLPGFR-TGVIYSYNES--VLAAAKKLTRFCSISAPTQRLLISMLSDTKFI-QEYLETNKRRIKKLYDSF 242 (334)
Q Consensus 167 ~~~~s~sK~~~~~g~r-~g~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~ 242 (334)
+++.|.+|.+ +++. .+++...+.. -.+++++.-..+..++++-..++.+-....++ ...-.++.++..++.+.+
T Consensus 233 ~vvqS~HKtL--~altQts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY~lmASlD~a~~~m~~~~G~~l~~~~i~~a~~~ 310 (417)
T PF01276_consen 233 IVVQSTHKTL--PALTQTSMLHVKGDRIVDHERVNEALSMHQTTSPSYPLMASLDVARAQMEEEEGRELLEEAIELAEEF 310 (417)
T ss_dssp EEEEEHHHHS--SS-TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHH
T ss_pred eeeechhhcc--cccccceEEEecCCCcccHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 8999999999 3333 3455543332 24555554333333333322222222122223 233345556666777777
Q ss_pred HHHHH
Q 019899 243 VAGLK 247 (334)
Q Consensus 243 ~~~l~ 247 (334)
++.++
T Consensus 311 R~~i~ 315 (417)
T PF01276_consen 311 RKKIN 315 (417)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77773
No 305
>PRK07482 hypothetical protein; Provisional
Probab=99.78 E-value=4.3e-16 Score=142.59 Aligned_cols=296 Identities=11% Similarity=0.018 Sum_probs=178.3
Q ss_pred CCCCCCcEEEecCcHHHHHHHHHHhc------C--CCCeEEecCCCCCChhhhhhhccC------------cEEEEEeCC
Q 019899 13 VSFDPSQIVLTAGATPAVEILCFCLA------D--HGNALLVPSPYYPGFDRDIRFRTG------------VELIPVHCR 72 (334)
Q Consensus 13 ~~~~~~~i~~~~g~~~~~~~~~~~l~------~--~gd~vl~~~p~~~~~~~~~~~~~g------------~~v~~v~~~ 72 (334)
.+.+.+.+++++++++|+..++.... . ...+|+....+|.+......-..| ..+..++.+
T Consensus 107 ~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p 186 (461)
T PRK07482 107 APAGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAP 186 (461)
T ss_pred CCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCC
Confidence 33345789999999999999987652 1 235788888888774322110111 112222221
Q ss_pred CCCCc-----------cccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEEEEecccc
Q 019899 73 STDNF-----------AFSITALDQAFNQARKRGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHVISDEIYG 140 (334)
Q Consensus 73 ~~~~~-----------~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~ 140 (334)
+.... ..+++.+++.+... ...++.+|++...+...|.+. +.+.+++|.++|++||+++|.||++.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~t 264 (461)
T PRK07482 187 HYYRRADAGMSEEQFSAYCADELEELILAE--GPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVT 264 (461)
T ss_pred ccccccccCCCHHHHHHHHHHHHHHHHHhc--CCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEecccc
Confidence 10000 01356666666421 123566565554476778774 66689999999999999999999999
Q ss_pred ccccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCCc-eEEEEeecCHHHHHHHHH---------hhcccCCChHH
Q 019899 141 GSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGF-RTGVIYSYNESVLAAAKK---------LTRFCSISAPT 210 (334)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~-r~g~i~~~~~~~~~~~~~---------~~~~~~~~~~~ 210 (334)
+|...|..+..- .. +..--+.+++|.++ .|. ++|.+++ ++++.+.+.. +..+++.|+++
T Consensus 265 GfGRtG~~~a~~-~~--------gv~PDiv~~gKgl~-gG~~Pi~av~~-~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~ 333 (461)
T PRK07482 265 GFGRLGSMFGSD-HY--------GIEPDLITVAKGLT-SAYAPLSGSIV-GEKVWDVLEQGSDEHGAIGHGWTYSGHPIC 333 (461)
T ss_pred CCCcCcchhhHH-hc--------CCCCCEEEEccccc-cCccccceeee-cHHHHHHHhcccccCCccccCCCCCcCHHH
Confidence 876555433221 11 11112234789998 785 8999998 7888777752 23456778888
Q ss_pred HHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHh----CCCcccCCCceeEEeeecCCcCCCCCh-----hhHHHH
Q 019899 211 QRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQ----LGIRCSESSAGLYCWADMSGLIPSYSE-----KGELEL 281 (334)
Q Consensus 211 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~g~~~~~~~~g~~~~~~~~~~~~~~~~-----~~~~~~ 281 (334)
..++.+.++..+ + ....++.+++-+++.+.|++ +++......-|.+..+++......... .....+
T Consensus 334 ~Aaa~a~L~~~~--~---~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i 408 (461)
T PRK07482 334 AAAALANLDILE--R---ENLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFDPALKIGPQV 408 (461)
T ss_pred HHHHHHHHHHHH--h---CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeeceeEEEEEeccCCCcCCCCChhhHHHHHH
Confidence 888777775432 1 12334445555566666644 333222223456666777532111000 112356
Q ss_pred HHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 282 WDKLLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 282 ~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
...++ ++||.+.++. ..+.+|+..+. ++++|++++++++.+++++
T Consensus 409 ~~~~~-~~Gvl~~~~~-----~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 454 (461)
T PRK07482 409 SAAAL-ERGVIARAMP-----HGDILGFAPPLVLTRAEADEIVAIAKDAVDE 454 (461)
T ss_pred HHHHH-HCCcEEecCC-----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 66644 5899986532 13568887663 6999999999999998865
No 306
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.77 E-value=8.9e-16 Score=140.14 Aligned_cols=299 Identities=11% Similarity=0.044 Sum_probs=174.9
Q ss_pred CCCCCCcEEEecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChhhhhhhccC-------------cEEEEEeCCCCCC-
Q 019899 13 VSFDPSQIVLTAGATPAVEILCFCLA--DHGNALLVPSPYYPGFDRDIRFRTG-------------VELIPVHCRSTDN- 76 (334)
Q Consensus 13 ~~~~~~~i~~~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~~g-------------~~v~~v~~~~~~~- 76 (334)
.+...+.+++++++++|+..++.... ....+|+....+|.+......-..+ ..++.+|.++...
T Consensus 109 ~p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 188 (457)
T PRK05639 109 SPIENPKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRN 188 (457)
T ss_pred CCCCcCEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccc
Confidence 33334689999999999999887652 3445788888777764432110111 1234444321110
Q ss_pred -cc----ccHH--------HHHHHHHHHHHcCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEEEEecccccc
Q 019899 77 -FA----FSIT--------ALDQAFNQARKRGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHVISDEIYGGS 142 (334)
Q Consensus 77 -~~----~~~~--------~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~ 142 (334)
+. -+.+ .+++.+.......+++.+|++...+...|.+. +.+.++++.++|++||+++|+||++.+|
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~ 268 (457)
T PRK05639 189 PWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGI 268 (457)
T ss_pred cccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcc
Confidence 00 0222 23333321111234667666654477778755 5677999999999999999999999875
Q ss_pred ccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHH-HhhcccCCChHHHHHHHHhhCCh
Q 019899 143 IFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAK-KLTRFCSISAPTQRLLISMLSDT 221 (334)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~ 221 (334)
...|..+.. ... +..+| + .+++|.++ .|+++|.+++ ++++.+... .....++.++....++.+.++..
T Consensus 269 GrtG~~~a~-~~~----gv~PD--i--v~~gK~l~-gG~pi~av~~-~~~i~~~~~~~~~~T~~g~p~~~aaa~a~l~~l 337 (457)
T PRK05639 269 GRTGKWFAS-EWF----EVKPD--L--IIFGKGVA-SGMGLSGVIG-RKELMDLTSGSALLTPAANPVISAAAEATLEII 337 (457)
T ss_pred CcCchHHHH-Hhc----CCCCC--E--EEechhhc-CCCcceeEEe-hHHHHhhcCCCcccCCCcCHHHHHHHHHHHHHH
Confidence 444432211 111 11122 2 23899998 7899999998 788877321 12234556777776666666432
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhC----CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCC
Q 019899 222 KFIQEYLETNKRRIKKLYDSFVAGLKQL----GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGS 297 (334)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~----g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~ 297 (334)
+ + ....++.+++-+++.+.|+++ ++......-|.++.+.+..............+...++ ++|+.+.+..
T Consensus 338 ~--~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~-~~Gv~~~~~g 411 (457)
T PRK05639 338 E--E---ENLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVKENGKPDPELTGKICWRAF-ELGLILPSYG 411 (457)
T ss_pred H--H---ccHHHHHHHHHHHHHHHHHHHHHhCCCEEeeccceeEEEEEEecCCCCCCHHHHHHHHHHHH-hCCeEEeecC
Confidence 2 1 123344455556666666552 3222222335555566533211111222345666644 4899987642
Q ss_pred CcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 298 ACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 298 ~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
. .++.+|+.... ++++|+++++++|.+++++
T Consensus 412 ~----~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~ 443 (457)
T PRK05639 412 M----FGNVIRITPPLVITKEIAEKGLEIMERAIKD 443 (457)
T ss_pred C----CCCEEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 1 24689999875 6999999999999999865
No 307
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.76 E-value=2.7e-16 Score=147.30 Aligned_cols=161 Identities=12% Similarity=0.154 Sum_probs=114.3
Q ss_pred CCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhh-hhhccCcEEEEEeCCCCCCcc----ccH-----HHHHH
Q 019899 17 PSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRD-IRFRTGVELIPVHCRSTDNFA----FSI-----TALDQ 86 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~-~~~~~g~~v~~v~~~~~~~~~----~~~-----~~l~~ 86 (334)
...-+++||+|.++.+++.+++.+||+||++..||.+.... +. +.|+.++++.... +.++ ++. +.+++
T Consensus 190 d~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLi-LsGa~PVYl~P~~-n~~Gi~g~I~~~~~~~~~i~~ 267 (720)
T PRK13578 190 DKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALI-QAGATPVYLETAR-NPFGFIGGIDAHCFDEEYLRE 267 (720)
T ss_pred CceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHH-HcCCeEEEeeccc-cccCCcCCCChHHccHHHHHH
Confidence 35789999999999999999999999999999999999986 77 8999999988543 2233 354 44888
Q ss_pred HHHHHH-H---cCCceeEEEEeCCCCCcccCCCHHHHHHHHHH-HHhcCcEEEEeccccccc-cCCCCcchhhhhhhccc
Q 019899 87 AFNQAR-K---RGVKVRGILICNPANPVGNIIPRETLYELLDF-AREKNIHVISDEIYGGSI-FGNEEFVSMAEILEAEE 160 (334)
Q Consensus 87 ~l~~~~-~---~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~-~~~~~~~vi~D~~~~~~~-~~~~~~~~~~~~~~~~~ 160 (334)
+|++.. . ...+.+++++++|+. .|++++ +++|+++ ++.++ +|++||||+... |. +....+....-+.+
T Consensus 268 ~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~yd---i~~I~~~~~h~~~-~llvDEAhgah~~F~-p~~~~~p~~al~~G 341 (720)
T PRK13578 268 QIREVAPERADEARPFRLAVIQLGTY-DGTIYN---ARQVVDKIGHLCD-YILFDSAWVGYEQFI-PMMADCSPLLLELN 341 (720)
T ss_pred HHHhcCccccccccCceEEEEECCCC-cceeec---HHHHHHHhhccCC-cEEEeCcchhhhccC-cccccCChhhhhcC
Confidence 887641 1 112258999999975 699999 8888888 67778 999999998743 32 11111111111111
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEe
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIY 187 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~ 187 (334)
-+...++++.|.||.+ +++..+..+
T Consensus 342 aD~p~i~v~QStHKtL--~alTQaS~L 366 (720)
T PRK13578 342 ENDPGIFVTQSVHKQQ--AGFSQTSQI 366 (720)
T ss_pred CCCCCeEEEEChhhcc--hhhhhHhhh
Confidence 1234458889999998 455555544
No 308
>PRK05965 hypothetical protein; Provisional
Probab=99.76 E-value=7.1e-16 Score=141.08 Aligned_cols=301 Identities=15% Similarity=0.117 Sum_probs=181.6
Q ss_pred hhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc------C-C-CCeEEecCCCCCChhhh-hhhccCc------------
Q 019899 6 SQVLGQAVSFDPSQIVLTAGATPAVEILCFCLA------D-H-GNALLVPSPYYPGFDRD-IRFRTGV------------ 64 (334)
Q Consensus 6 ~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~------~-~-gd~vl~~~p~~~~~~~~-~~~~~g~------------ 64 (334)
.+++.+..+.+.+.+++++++++|+..++.... . + ..+|+....+|.+.... .. ..+.
T Consensus 96 ae~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s-~t~~~~~~~~~~~~~~ 174 (459)
T PRK05965 96 AAKLAERAPGSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAG-LTALPAFHRGFDLPLP 174 (459)
T ss_pred HHHHHhhCCCCcCEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHH-hcCCchhhcccCCCCC
Confidence 333433343345689999999999999987542 1 1 35788888888775421 11 1111
Q ss_pred EEEEEeCCCCC--Ccccc--------HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEE
Q 019899 65 ELIPVHCRSTD--NFAFS--------ITALDQAFNQARKRGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHV 133 (334)
Q Consensus 65 ~v~~v~~~~~~--~~~~~--------~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~v 133 (334)
.+..++.+... .+..| ++.+++.++.. ...++.+|++...+...|.+. |.+.++++.++|++||+++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gill 252 (459)
T PRK05965 175 WQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAEL--GADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILF 252 (459)
T ss_pred CCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEE
Confidence 12233321111 01112 24566666532 113567666665577778755 6667999999999999999
Q ss_pred EEeccccccccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHH---------hhcc
Q 019899 134 ISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKK---------LTRF 203 (334)
Q Consensus 134 i~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~---------~~~~ 203 (334)
|.||++.+|...|..+. ... .+..--+.+++|.++ .| +++|.+++ ++++.+.+.. +..+
T Consensus 253 I~DEV~tGfGRtG~~~a-~~~--------~gv~PDiv~~gKgl~-gG~~Pi~av~~-~~~i~~~~~~~~~~~~~~~h~~T 321 (459)
T PRK05965 253 VADEVITGFGRTGPLFA-CEA--------EGVVPDLMTVAKGLT-SGYVPMGAVLM-SDHVYQGIADGAGAAAPVGHGYT 321 (459)
T ss_pred EEechhccCccCchhhh-Hhh--------cCCCCCeEEechhhc-cCCcceeEEEE-cHHHHHHHhccccccccccccCC
Confidence 99999998765554321 111 111122335789998 88 59999998 8888877752 2345
Q ss_pred cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-Cccc--CCCceeEEeeecCCcCCCCC-----h
Q 019899 204 CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLG-IRCS--ESSAGLYCWADMSGLIPSYS-----E 275 (334)
Q Consensus 204 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~~~--~~~~g~~~~~~~~~~~~~~~-----~ 275 (334)
++.++.+..++.+.++..+ + +...++.+++-+++.+.|+++. .... ...-|+++.+++........ .
T Consensus 322 ~~gnpl~~Aaa~a~L~~l~--~---~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~ 396 (459)
T PRK05965 322 YSAHPVSAAVGLEVLRLYH--E---GGLLANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGALELVADKATKTPFDAAL 396 (459)
T ss_pred CCCCHHHHHHHHHHHHHHH--h---ccHHHHHHHHHHHHHHHHHhhccCCCEEEEeecceEEEEEEeccccccCCCCchh
Confidence 6778888887777765332 1 2234455566666666666541 1111 12235555566643211100 0
Q ss_pred hhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 276 KGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 276 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
.....+... +.++||.+.+.. .+.+|+..+- +++++++++++++.+++++
T Consensus 397 ~~~~~i~~~-~~~~Gll~~~~g------~~~i~~~PpL~it~~ei~~~~~~l~~~l~~ 447 (459)
T PRK05965 397 DPADRIFDR-AYANGLVFRAFG------DGVLGFAPALCCTEGEFDLIFERTRKTLDD 447 (459)
T ss_pred HHHHHHHHH-HHhCCeEEEecC------CcEEEEECCCcCCHHHHHHHHHHHHHHHHH
Confidence 123345666 445899987521 3578998664 6999999999999999875
No 309
>PRK04311 selenocysteine synthase; Provisional
Probab=99.76 E-value=6.7e-16 Score=140.16 Aligned_cols=291 Identities=19% Similarity=0.229 Sum_probs=181.4
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCCh------hhhhhhccCcEEEEEeCCCCCCcc
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGF------DRDIRFRTGVELIPVHCRSTDNFA 78 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~------~~~~~~~~g~~v~~v~~~~~~~~~ 78 (334)
+++.+++.++ .++.+++++++.|+..++.++ .+||+|+++...+..+ ...+. ..|++++.++.. + .
T Consensus 132 ~e~~lA~l~G--ae~a~vv~sgtaAl~l~l~~l-~~GdeVIvs~~e~~~~ggs~~i~~~~~-~~G~~l~~v~~~--~--~ 203 (464)
T PRK04311 132 LAALLCALTG--AEDALVVNNNAAAVLLALNAL-AAGKEVIVSRGELVEIGGAFRIPDVMR-QAGARLVEVGTT--N--R 203 (464)
T ss_pred HHHHHHHHhC--CCeEEEECCHHHHHHHHHHHh-CCCCEEEEcchhhhhcCcchhhHHHHH-HCCcEEEEECCC--C--C
Confidence 4455555444 457888999999999888664 7999999998654422 22345 689999999852 2 3
Q ss_pred ccHHHHHHHHHHHHHcCCceeEEEEeCCCCC--cc--cCCCHHHHHHHHHHHHhcCcEEEEeccccccc----cCCCCcc
Q 019899 79 FSITALDQAFNQARKRGVKVRGILICNPANP--VG--NIIPRETLYELLDFAREKNIHVISDEIYGGSI----FGNEEFV 150 (334)
Q Consensus 79 ~~~~~l~~~l~~~~~~~~~~~~i~~~~p~np--tG--~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~----~~~~~~~ 150 (334)
.+++++++++++ +++++++++++|| +| ...| +++|+++|++||+++++|...+.+. ++-....
T Consensus 204 t~~~dle~aI~~------~TklV~~vh~sN~~i~G~~~~~d---l~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p 274 (464)
T PRK04311 204 THLRDYEQAINE------NTALLLKVHTSNYRIEGFTKEVS---LAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEP 274 (464)
T ss_pred CCHHHHHHhcCc------cCeEEEEEcCCCccccccCCcCC---HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCC
Confidence 568999999986 7999999999997 34 4567 9999999999999999999643321 1100111
Q ss_pred hhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh--hcccCCChHHHHHHHHhhC----ChH-H
Q 019899 151 SMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL--TRFCSISAPTQRLLISMLS----DTK-F 223 (334)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~----~~~-~ 223 (334)
.+..... .+.+++++|.+|++|.+ ..|++++ ++++++.+++. .......-....++..++. ..+ +
T Consensus 275 ~~~~~l~-----~GaDiv~fSg~K~LgGp--~~G~i~g-~~~li~~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~ 346 (464)
T PRK04311 275 TVQELLA-----AGVDLVTFSGDKLLGGP--QAGIIVG-KKELIARLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLA 346 (464)
T ss_pred chhhHHh-----cCCcEEEecCcccccCC--ceEEEEE-cHHHHHHHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhh
Confidence 2233222 67889999999998634 4788888 78888877642 2222233333333333332 111 0
Q ss_pred H----HHHHHHHHHHHHHHHHHHHHHHHhCC---C--cccCC----Cce------e-EEeeecCCcCCCCChhhHHHHHH
Q 019899 224 I----QEYLETNKRRIKKLYDSFVAGLKQLG---I--RCSES----SAG------L-YCWADMSGLIPSYSEKGELELWD 283 (334)
Q Consensus 224 ~----~~~~~~~~~~~~~~~~~~~~~l~~~g---~--~~~~~----~~g------~-~~~~~~~~~~~~~~~~~~~~~~~ 283 (334)
. ...+....+++.++++.+.+.|+... + ++... .+| + ..-+.+... .....++..
T Consensus 347 ~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~-----~~~~~~l~~ 421 (464)
T PRK04311 347 EEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTPK-----DRSLEALAA 421 (464)
T ss_pred hhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeCC-----CCCHHHHHH
Confidence 0 01133344667778888888887652 2 22211 011 0 111222211 123456666
Q ss_pred HHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHHHHHHHHHH
Q 019899 284 KLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAE 331 (334)
Q Consensus 284 ~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~ 331 (334)
. |++....|... ..++.+.+.+-.+.++|++.++++|++++.
T Consensus 422 ~-lr~~~~~i~~r-----~~~~~~~ld~r~~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 422 R-LRLLPPPVIGR-----IEDGRLLLDLRTLEEEDEERLAAALLEALN 463 (464)
T ss_pred H-HhcCCCCEEEE-----EECCEEEEEeCcCCHHHHHHHHHHHHHHhh
Confidence 6 56544333321 235677788776789999999999998864
No 310
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=99.76 E-value=6.6e-17 Score=134.52 Aligned_cols=282 Identities=17% Similarity=0.274 Sum_probs=204.6
Q ss_pred cEEEec--CcHHHHHHHHH--HhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 19 QIVLTA--GATPAVEILCF--CLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 19 ~i~~~~--g~~~~~~~~~~--~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
+|+.+. ++|.++-+... ...-++..|.+|+|+|.++...++ ..|..+..+...+....++|.+.+.+.+.+.
T Consensus 120 Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~-~ag~~~~~yrYyd~~t~gld~~g~ledl~~~--- 195 (427)
T KOG1411|consen 120 RIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFK-DAGLPVKFYRYYDPKTRGLDFKGMLEDLGEA--- 195 (427)
T ss_pred ceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCcccc-ccCcceeeeeeccccccccchHHHHHHHhcC---
Confidence 444443 45656544433 333467789999999999999999 9999998888766677788988877777653
Q ss_pred CCceeEEEEeCC--CCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCC--CcchhhhhhhccccCCCcEEEEe
Q 019899 95 GVKVRGILICNP--ANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNE--EFVSMAEILEAEEVDKDRVHIIY 170 (334)
Q Consensus 95 ~~~~~~i~~~~p--~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 170 (334)
....+++.+. +||||.--+.+++++|.++.++.+.+-+.|-+|++|.-+.- ....+.-+.. +...++++-
T Consensus 196 --p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~----~g~~~~laQ 269 (427)
T KOG1411|consen 196 --PEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVE----DGHEILLAQ 269 (427)
T ss_pred --CCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHH----cCCceEeeh
Confidence 3444555555 99999999999999999999999999999999999775421 1223333333 267778889
Q ss_pred cccccCCCCCceEEEE--eecCHHHHHHHHHh----hcc-c-CCChHHHHHHHHhhCChHHHHHH---HHHHHHHHHHHH
Q 019899 171 GLSKDLSLPGFRTGVI--YSYNESVLAAAKKL----TRF-C-SISAPTQRLLISMLSDTKFIQEY---LETNKRRIKKLY 239 (334)
Q Consensus 171 s~sK~~~~~g~r~g~i--~~~~~~~~~~~~~~----~~~-~-~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~ 239 (334)
|+.|-+|+.|-|+|.+ +|.+.+...+++.. ..+ + +++......+...+.+.+.-.+| ..-+.+++..++
T Consensus 270 SyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR 349 (427)
T KOG1411|consen 270 SYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMADRIISMR 349 (427)
T ss_pred hhhhhcchhhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhhhccCChHHHHHHHHHHHHHHHhhhhhH
Confidence 9999999999999985 66677766666543 222 3 44445667777788776544444 356788888999
Q ss_pred HHHHHHHHhCC----CcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCC
Q 019899 240 DSFVAGLKQLG----IRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLT 315 (334)
Q Consensus 240 ~~~~~~l~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~ 315 (334)
+.+.+.|+..| |......-|||++-.+. .+-.+.|.+++-|++.- + -|||++.++
T Consensus 350 ~~L~d~L~~~gs~~~W~hI~~QIGMF~fTgl~-----------peQv~~l~ke~~iYmT~--------d--GRiS~aG~s 408 (427)
T KOG1411|consen 350 QQLFDALEKEGSPGNWSHITKQIGMFCFTGLN-----------PEQVDWLTKEYHIYLTK--------D--GRISMAGLS 408 (427)
T ss_pred HHHhHHhhcCCCCccHHHHHHhhheeeecCCC-----------HHHHHHHHhhheeeecc--------C--ceEeecccc
Confidence 99999998864 33345567888865554 37788888999888752 2 389998788
Q ss_pred cccHHHHHHHHHHHHH
Q 019899 316 HEDIPLVIERIQKVAE 331 (334)
Q Consensus 316 ~~~l~~~l~~l~~~~~ 331 (334)
...+..+.+++-++.+
T Consensus 409 s~nV~yLa~aih~vtk 424 (427)
T KOG1411|consen 409 SSNVPYLADAIHAVTK 424 (427)
T ss_pred ccCCcccchhhHhHhc
Confidence 8888888887776654
No 311
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.75 E-value=2.1e-16 Score=134.01 Aligned_cols=286 Identities=15% Similarity=0.103 Sum_probs=203.2
Q ss_pred CCcEEEecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 17 PSQIVLTAGATPAVEILCFCLA--DHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
.+...+.++..-|+...+..|. -||..|+.+...|.+....++ ..+++-+-+. +.|++.|++.++...
T Consensus 231 K~aALlFsSCfVANDstLftLak~lpgcei~SD~gNHASMI~GIr-ns~v~K~IFr-------HND~~hL~~lL~~~~-- 300 (570)
T KOG1360|consen 231 KEAALLFSSCFVANDSTLFTLAKKLPGCEIFSDEGNHASMIQGIR-NSRVPKHIFR-------HNDLDHLEQLLQSSP-- 300 (570)
T ss_pred CcceeeeeeeeeccchHHHHHHHHCCCcEEeccccchHHHHHHhh-hcCCcceeec-------cCCHHHHHHHHHhCC--
Confidence 4455555666667766666662 489999999999999999998 7776544444 458999999988642
Q ss_pred CCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEecccc
Q 019899 95 GVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSK 174 (334)
Q Consensus 95 ~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK 174 (334)
...+|.|.....+..+|.+-| +++|++++++||.+-++||++.-..|+..+ ....+- .+....-++..+++.|
T Consensus 301 ~svPKivAFEtVhSM~Gavcp---leelcDvah~yGAiTFlDEVHAVGlYG~rG-aGvger---dGvm~kvDiIsGTLgK 373 (570)
T KOG1360|consen 301 KSVPKIVAFETVHSMDGAVCP---LEELCDVAHKYGAITFLDEVHAVGLYGPRG-AGVGER---DGVMHKVDIISGTLGK 373 (570)
T ss_pred CCCCceEEEeeeeccCCCcCC---HHHHHHHHHHhCceeeeehhhhhccccCCC-CCcccc---CCcchhhhhcccchhh
Confidence 235788999999999999999 999999999999999999999887775332 122111 1222555677899999
Q ss_pred cCCCCCceEEEEeecCHHHHHHHHHhhcc--cC--CChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 019899 175 DLSLPGFRTGVIYSYNESVLAAAKKLTRF--CS--ISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLG 250 (334)
Q Consensus 175 ~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 250 (334)
+||.-| |||.+ ...+++.++.+... |+ .++.....+.++.+-.. .+.-...+++.+++..++++.|.+.|
T Consensus 374 afGcVG---GYIAa-t~~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk--~~eg~~lR~~hqrnv~~~kq~l~~~G 447 (570)
T KOG1360|consen 374 AFGCVG---GYIAA-TRKLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILK--SEEGRVLRRQHQRNVKYVKQLLMELG 447 (570)
T ss_pred hccccc---ceehh-hhhHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHh--hhhhHHHHHHHHHHHHHHHHHHHHcC
Confidence 998676 89987 88999999988655 33 34444444444433211 11124567778888999999999999
Q ss_pred CcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC-CCCeEEEEecC-CCcccHHHHHHHHHH
Q 019899 251 IRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI-EPGWFRCCFTS-LTHEDIPLVIERIQK 328 (334)
Q Consensus 251 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~-~~~~iRi~~~~-~~~~~l~~~l~~l~~ 328 (334)
+.+...+... +-+.+.... .+.+..+.|+.+++|++-.-.+.... +...+||.... .|++..+.+++.|..
T Consensus 448 iPVi~~pSHI-iPv~vgda~------l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~ 520 (570)
T KOG1360|consen 448 IPVIPNPSHI-IPVRVGDAA------LAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLD 520 (570)
T ss_pred CcccCCCcce-eeeeccCHH------HHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHH
Confidence 9988776554 334443321 23578899999999998755443222 34678998764 588888888888877
Q ss_pred HHHH
Q 019899 329 VAET 332 (334)
Q Consensus 329 ~~~~ 332 (334)
+-.+
T Consensus 521 vw~~ 524 (570)
T KOG1360|consen 521 VWNE 524 (570)
T ss_pred HHHH
Confidence 6554
No 312
>PRK12403 putative aminotransferase; Provisional
Probab=99.75 E-value=2.2e-15 Score=137.99 Aligned_cols=299 Identities=13% Similarity=0.102 Sum_probs=171.4
Q ss_pred hhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc-------CCCCe-EEecCCCCCC-hhhhhhhccCcE-----------E
Q 019899 7 QVLGQAVSFDPSQIVLTAGATPAVEILCFCLA-------DHGNA-LLVPSPYYPG-FDRDIRFRTGVE-----------L 66 (334)
Q Consensus 7 ~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~-------~~gd~-vl~~~p~~~~-~~~~~~~~~g~~-----------v 66 (334)
+++...++...+.+++++++++|+..++.... +++.. |+....+|.+ ....+. ..|.+ +
T Consensus 105 e~L~~~~p~~~~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s-~s~~~~~~~~~~~~~~~ 183 (460)
T PRK12403 105 ELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATA-LGGMKFMHEMGGLIPDV 183 (460)
T ss_pred HHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhh-cCCCccccccCCCCCCC
Confidence 33433344334789999999999999988763 22333 4444445554 333333 33322 2
Q ss_pred EEEeCCCC--CCccc--------cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEEEE
Q 019899 67 IPVHCRST--DNFAF--------SITALDQAFNQARKRGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHVIS 135 (334)
Q Consensus 67 ~~v~~~~~--~~~~~--------~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~ 135 (334)
..+|.+.. ..+.. +++.+++.+.+. ...++.+|++...+...|.+. +.+.++++.++|++||+++|+
T Consensus 184 ~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~--~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~ 261 (460)
T PRK12403 184 AHIDEPYWYANGGELTPAEFGRRAALQLEEKILEL--GAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCA 261 (460)
T ss_pred EEeCCCcccccccCCChHHHHHHHHHHHHHHHHHh--CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 23332110 00011 134455544321 112455555544466778765 566799999999999999999
Q ss_pred eccccccccCCCCcc-hhhhhhhccccCCCcEEEEecccccCCCCCc-eEEEEeecCHHHHHHHHH------hhcccCCC
Q 019899 136 DEIYGGSIFGNEEFV-SMAEILEAEEVDKDRVHIIYGLSKDLSLPGF-RTGVIYSYNESVLAAAKK------LTRFCSIS 207 (334)
Q Consensus 136 D~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~-r~g~i~~~~~~~~~~~~~------~~~~~~~~ 207 (334)
||++.+|...|..+. ....+ .+ +++ +++|.++ .|. ++|.+++ ++++.+.+.. +...++.+
T Consensus 262 DEV~tGfGRtG~~~a~e~~gv------~P--Div--~~gK~lg-gG~~Piga~v~-~~~i~~~~~~~~~~~~~~~T~~gn 329 (460)
T PRK12403 262 DEVIGGFGRTGEWFAHEHFGF------EP--DTL--SIAKGLT-SGYVPMGGLVL-SKRIAEALVEQGGVFAHGLTYSGH 329 (460)
T ss_pred eccccCCCcCchhhhhhhcCC------CC--CeE--EEccccc-ccccceEEEEE-CHHHHHHHhcCCCccccCCCCCCC
Confidence 999987655454322 11111 12 222 4899998 784 8999998 7888887753 23345678
Q ss_pred hHHHHHHHHhhCChHHHHHHHHHHHHHHH-HHHHHHHHHHHh----CCCcccCCCceeEEeeecCCcCCCC---Ch--hh
Q 019899 208 APTQRLLISMLSDTKFIQEYLETNKRRIK-KLYDSFVAGLKQ----LGIRCSESSAGLYCWADMSGLIPSY---SE--KG 277 (334)
Q Consensus 208 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~----~g~~~~~~~~g~~~~~~~~~~~~~~---~~--~~ 277 (334)
+.+..++.+.++..+ + +...++++ ++-+++.+.|++ +++......-|.++.+++....... .. ..
T Consensus 330 Pl~~Aaala~L~~i~---~--~~l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~ 404 (460)
T PRK12403 330 PVAAAVAIANLKALR---D--EGVVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDL 404 (460)
T ss_pred HHHHHHHHHHHHHHH---h--ccHHHHHHHHHHHHHHHHHHHHHhcCCCEEeEeecceEEEEEEccCccccccccchhHH
Confidence 888887777775432 1 11233443 445555555543 3332222234556666664321110 00 11
Q ss_pred HHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 278 ELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 278 ~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
...+... +.++|+.+.+.. +.+|++... ++++|++++++.+.+++++.
T Consensus 405 ~~~~~~~-~~~~Gll~~~~~-------~~~~l~Ppl~it~~eid~~~~~l~~al~~~ 453 (460)
T PRK12403 405 AWRCRTI-GFEEGVIIRSTL-------GRMIMAPALVAGRAEIDELVDKTRIAVDRT 453 (460)
T ss_pred HHHHHHH-HHhCCEEEEecC-------CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2233344 345899987421 347888774 59999999999999998763
No 313
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.75 E-value=1.1e-15 Score=139.71 Aligned_cols=280 Identities=14% Similarity=0.181 Sum_probs=171.7
Q ss_pred CCcEEEecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChhhhhhhc--c-----------Cc------EEEEEeCCCCC
Q 019899 17 PSQIVLTAGATPAVEILCFCLA--DHGNALLVPSPYYPGFDRDIRFR--T-----------GV------ELIPVHCRSTD 75 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~--~-----------g~------~v~~v~~~~~~ 75 (334)
.+.+.+++++++|+..++.... ....+|+....+|.+..+.+... . |. ++..+|
T Consensus 155 ~~~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----- 229 (474)
T PLN02482 155 VEMVRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAP----- 229 (474)
T ss_pred CCEEEEeCChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEec-----
Confidence 5799999999999999987652 34467888888888754321100 0 10 111122
Q ss_pred CccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCC-HHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhh
Q 019899 76 NFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIP-RETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAE 154 (334)
Q Consensus 76 ~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~-~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~ 154 (334)
..|++.+++.++.. ..++.+|++.......|.+.+ .+.++.+.++|++||+++|+||++.++ ..+.... .+
T Consensus 230 --~nd~~~l~~~l~~~---~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~~ga--~~ 301 (474)
T PLN02482 230 --YNDLEAVKKLFEAN---KGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAYGGA--QE 301 (474)
T ss_pred --CCChHHHHHHHHhC---CCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCcchH--hH
Confidence 12788898888642 235665555544677787766 567999999999999999999999776 3332211 11
Q ss_pred hhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh-----hcccCCChHHHHHHHHhhCChHHHHHHHH
Q 019899 155 ILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL-----TRFCSISAPTQRLLISMLSDTKFIQEYLE 229 (334)
Q Consensus 155 ~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 229 (334)
.. +..+| +.+++|.+| .|+++|.+++ ++++.+.+... ...++.+++...+..+.++..+ + .
T Consensus 302 ~~---gv~PD----i~t~gK~lg-gG~Pigav~g-~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~---~--~ 367 (474)
T PLN02482 302 YF---GITPD----LTTLGKVIG-GGLPVGAYGG-RREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQ---Q--P 367 (474)
T ss_pred Hh---CCCCC----EEEecchhh-CCCceEEEEE-cHHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHh---c--c
Confidence 11 11122 357899998 8899999987 88998887532 2334567777766666654321 1 2
Q ss_pred HHHHHHHHHHHHHHHHHHhC----CCccc-CCCceeEEeeecCC-cC-C-----CCChhhHHHHHHHHHHhcCeEEcCCC
Q 019899 230 TNKRRIKKLYDSFVAGLKQL----GIRCS-ESSAGLYCWADMSG-LI-P-----SYSEKGELELWDKLLNIAKINVTPGS 297 (334)
Q Consensus 230 ~~~~~~~~~~~~~~~~l~~~----g~~~~-~~~~g~~~~~~~~~-~~-~-----~~~~~~~~~~~~~ll~~~gi~v~~g~ 297 (334)
...+++.++-+++.+.|++. ++.+. ....+++- +.+.. +. + .........+...+++ +||.+.|..
T Consensus 368 ~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g~~g-i~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~-~Gv~~~~~~ 445 (474)
T PLN02482 368 GTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISGMFG-FFFTEGPVYNFADAKKSDTAKFARFHRGMLE-EGVYLAPSQ 445 (474)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccceEEE-EEEecCCccChhhhccCCHHHHHHHHHHHHH-CCeEEeccC
Confidence 34455555666666666553 44433 23345432 23321 11 0 0111122356667555 899998743
Q ss_pred CcCCCCCCeEEEEecCCCcccHHHHHHHHHHHHHH
Q 019899 298 ACHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 298 ~~~~~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
. . .+. +++. +|++||+++++++.+++++
T Consensus 446 ~-~----~~~-psl~-ht~~dId~~l~al~~~l~~ 473 (474)
T PLN02482 446 F-E----AGF-TSLA-HTEEDIDFTIAAAERVLAR 473 (474)
T ss_pred C-C----CCc-CCCC-CCHHHHHHHHHHHHHHHHh
Confidence 2 1 111 3444 7999999999999999875
No 314
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.75 E-value=1.3e-16 Score=144.24 Aligned_cols=247 Identities=17% Similarity=0.176 Sum_probs=171.7
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcC-----C---C------CeEEecCCCCCChhhhhhhccCcEEE
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLAD-----H---G------NALLVPSPYYPGFDRDIRFRTGVELI 67 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~-----~---g------d~vl~~~p~~~~~~~~~~~~~g~~v~ 67 (334)
.+|+.+.++ .+ ....=.+|+|+|+++...+.+... . + -+|+++.-.|.++...+. .+|.+..
T Consensus 107 v~~l~~l~~--~~-~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~-~lG~~~~ 182 (460)
T COG0076 107 VNMLSDLLG--AP-EEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAAR-YLGLGLR 182 (460)
T ss_pred HHHHHHHhC--CC-CCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHHH-HhCCCce
Confidence 345666555 22 334578999999999887766421 1 1 169999999999999999 9999999
Q ss_pred EEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccC--
Q 019899 68 PVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFG-- 145 (334)
Q Consensus 68 ~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~-- 145 (334)
.+++... +..+|++++++++++....| +|+.+.+++++|.+-| +++|.++|+++++|++||.||+++...
T Consensus 183 ~v~~~~~-~~~id~~~l~~~i~~~t~~g----~vV~~aGtT~~G~iDd---i~~ia~ia~~~~i~lHVDAA~GG~~~pf~ 254 (460)
T COG0076 183 RVPTVPT-DYRIDVDALEEAIDENTIGG----VVVGTAGTTDTGSIDD---IEELADIAEEYGIWLHVDAAFGGFLLPFL 254 (460)
T ss_pred eEEeccC-ccccCHHHHHHHHHhhccCc----eEEEEecCCCCCccCC---HHHHHHHHHHcCCcEEEEccccceeeccc
Confidence 9998644 78999999999999852221 3888888999999999 999999999999999999999987642
Q ss_pred CCCcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHH-HHHHHHHhhcccC----------CChHHHHHH
Q 019899 146 NEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNES-VLAAAKKLTRFCS----------ISAPTQRLL 214 (334)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~-~~~~~~~~~~~~~----------~~~~~~~~~ 214 (334)
.....-...+ ..-+-+..++||.. +..+.+||++.++++ +.+.+.....++. .+.++-.++
T Consensus 255 ~~~~~~~f~l-------~~vdSIt~d~HK~g-~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~ 326 (460)
T COG0076 255 EPDGRWDFGL-------EGVDSITVDGHKYG-LAPIGCGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQAL 326 (460)
T ss_pred CccchhhcCC-------CCceEEEECccccc-CCCCCceEEEEECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHH
Confidence 1111101111 33344556999966 577889999998884 5555442221111 122222333
Q ss_pred HHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CcccCCCceeEEeeecCC
Q 019899 215 ISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLG-IRCSESSAGLYCWADMSG 268 (334)
Q Consensus 215 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~~~~~~~g~~~~~~~~~ 268 (334)
..+..-.....+.+.++.++..+.++++.+.|++.+ +++..++....+.++.++
T Consensus 327 ~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~~ 381 (460)
T COG0076 327 ALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKD 381 (460)
T ss_pred HHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcCC
Confidence 333322221144557888888899999999999986 888875555556677754
No 315
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.75 E-value=1e-15 Score=138.62 Aligned_cols=291 Identities=12% Similarity=0.070 Sum_probs=180.7
Q ss_pred hhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc-------CCCCeEEecCCCCCChhhh-hhhccCc-------------E
Q 019899 7 QVLGQAVSFDPSQIVLTAGATPAVEILCFCLA-------DHGNALLVPSPYYPGFDRD-IRFRTGV-------------E 65 (334)
Q Consensus 7 ~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~-------~~gd~vl~~~p~~~~~~~~-~~~~~g~-------------~ 65 (334)
+++.+..+.+.+.+++++++++|+..++.... .+..+|+....+|.+.... +. ..+. .
T Consensus 93 ~~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s-~~~~~~~~~~~~~~~~~~ 171 (428)
T PRK07986 93 RKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMS-VCDPDNSMHSLYKGYLPE 171 (428)
T ss_pred HHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhc-ccCCchhhhhccCCCCCC
Confidence 33433344345789999999999999887543 2346788888888764322 22 2121 1
Q ss_pred EEEEeCCCCC---Cc-cccHHHHHHHHHHHHHcCCceeEEEEeCC-CCCcccC-CCHHHHHHHHHHHHhcCcEEEEeccc
Q 019899 66 LIPVHCRSTD---NF-AFSITALDQAFNQARKRGVKVRGILICNP-ANPVGNI-IPRETLYELLDFAREKNIHVISDEIY 139 (334)
Q Consensus 66 v~~v~~~~~~---~~-~~~~~~l~~~l~~~~~~~~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~vi~D~~~ 139 (334)
+..+|..... .+ ..|++++++.++.. +.++.+|++... +...|+. .+.+.+++|.++|++||+++|+||++
T Consensus 172 ~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~---~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~ 248 (428)
T PRK07986 172 NLFAPAPQSRFDGEWDERDIAPFARLMAAH---RHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIA 248 (428)
T ss_pred CEEECCCCcccchhhHHHHHHHHHHHHHhC---CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc
Confidence 1223321100 01 23667787777632 235565555542 5556764 45688999999999999999999999
Q ss_pred cccccCCCCcc-hhhhhhhccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHH-------hhcccCCChHH
Q 019899 140 GGSIFGNEEFV-SMAEILEAEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKK-------LTRFCSISAPT 210 (334)
Q Consensus 140 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~-------~~~~~~~~~~~ 210 (334)
.++...|..+. ....+ .+| ++ +++|.++ .| +.+|.+++ ++++.+.+.. +...++.+++.
T Consensus 249 tG~GrtG~~fa~~~~gv------~PD--i~--t~gK~l~-gG~~p~~av~~-~~~i~~~~~~~~~~~~~~~~T~~g~p~~ 316 (428)
T PRK07986 249 TGFGRTGKLFACEHAGI------APD--IL--CLGKALT-GGTMTLSATLT-TREVAETISNGEAGCFMHGPTFMGNPLA 316 (428)
T ss_pred cCCccCCCeeeecccCC------CCC--EE--Eechhhh-CCcccCcchhc-hHHHHHHhhcCCCCccccCCCCCcCHHH
Confidence 77644443321 11111 122 22 5899997 78 58999998 8888888864 23445677777
Q ss_pred HHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccC--CCceeEEeeecCCcCCCCChhhHHHHHHHHHH
Q 019899 211 QRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSE--SSAGLYCWADMSGLIPSYSEKGELELWDKLLN 287 (334)
Q Consensus 211 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 287 (334)
..++.+.++..+ + ....++++++.+++.+.|+++ ...... ..-|++..+.+..+. ....+... +.
T Consensus 317 ~aaa~a~L~~i~---~--~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vRg~Gl~~~ve~~~~~------~~~~~~~~-l~ 384 (428)
T PRK07986 317 CAVANASLSLLE---S--GDWQQQVAAIEAQLREELAPLRDAPMVADVRVLGAIGVVETTRPV------NMAALQRF-FV 384 (428)
T ss_pred HHHHHHHHHHHH---h--CCHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccceEEEEEeCCcc------cHHHHHHH-HH
Confidence 777777765422 1 123555666666677777654 111111 112555556664331 23456667 45
Q ss_pred hcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 288 IAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 288 ~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
++|+.+.+. .+.+|+..+- ++++++++++++|.+++++
T Consensus 385 ~~Gl~~~~~-------g~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 385 EQGVWIRPF-------GKLIYLMPPYIILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred HCCcEEEec-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 589998763 1478998664 6999999999999999865
No 316
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.75 E-value=1.2e-17 Score=140.15 Aligned_cols=280 Identities=18% Similarity=0.269 Sum_probs=170.1
Q ss_pred hhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCC------CCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCc
Q 019899 4 FMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADH------GNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNF 77 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~------gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~ 77 (334)
.|++..|... .+.-.|++++|+|+.+++++.+|... --+|+...|.|+.|..... ........+.=
T Consensus 54 ~LH~~VGNAv-t~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~-~f~s~~y~w~G------ 125 (363)
T PF04864_consen 54 RLHRVVGNAV-TDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTD-FFDSRLYKWAG------ 125 (363)
T ss_dssp HHHHHH-SB---TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCC-CT-BTTEEEEE------
T ss_pred HHHHHhcccc-ccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHH-hccccCccccc------
Confidence 4555666422 23347999999999999999999633 2479999999999988776 44322222221
Q ss_pred cccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhh
Q 019899 78 AFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILE 157 (334)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~ 157 (334)
|...+. ++ ....+-.=++++||||.|.+ .+.++ +..+..+|-|-+|. |+. +.++...
T Consensus 126 --da~~~~---~~---~~~~~~IElVTSPNNPDG~l-----r~~V~---~g~~~k~I~D~AYY---WPh--yTpI~~~-- 182 (363)
T PF04864_consen 126 --DASNFK---NS---DNPSPYIELVTSPNNPDGQL-----REAVL---NGSSGKVIHDLAYY---WPH--YTPITAP-- 182 (363)
T ss_dssp --ECCCGT---T----S-CCGEEEEEESS-TTT-----------SS---TTTEEEEEEE-TT----STT--TS---S---
T ss_pred --cHHhhc---cC---CCCCCeEEEEeCCCCCcccc-----cchhc---CCCCcceeeeeeee---ccc--ccccCCC--
Confidence 111111 00 00133335899999999987 33333 45567779999986 332 2333322
Q ss_pred ccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh--cccCCChHHHHHHHHhhCChH--H-HH----HHH
Q 019899 158 AEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT--RFCSISAPTQRLLISMLSDTK--F-IQ----EYL 228 (334)
Q Consensus 158 ~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~--~-~~----~~~ 228 (334)
.+.++.+.|+||.-|.+|.|+||.+.+|+++.+++..+- +..+++--+|.-++.+++..- . .. +.+
T Consensus 183 -----aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F 257 (363)
T PF04864_consen 183 -----ADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIF 257 (363)
T ss_dssp -----B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHH
T ss_pred -----CCCceEEEEEecccCccccccceeeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCccchH
Confidence 466788899999999999999999999999988887653 345677778877777765310 0 01 244
Q ss_pred HHHHHHHHHHHHHHHHHHHhCC-Cccc-------------CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEc
Q 019899 229 ETNKRRIKKLYDSFVAGLKQLG-IRCS-------------ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVT 294 (334)
Q Consensus 229 ~~~~~~~~~~~~~~~~~l~~~g-~~~~-------------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~ 294 (334)
.--++.++++-+.|.+.+...+ |.+. ....+-|.|+++....+ .++... |++.||..+
T Consensus 258 ~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~eed-------~DC~~~-l~~~~I~tr 329 (363)
T PF04864_consen 258 HFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREED-------EDCYAV-LREAKIITR 329 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCGG-------SSHHHH-HHCTTEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCccc-------ccHHHH-HHhCCcccC
Confidence 5566777777788888876642 2221 22356689999986422 244444 777999999
Q ss_pred CCCCcCCCCCCeEEEEecCCCcccHHHHHHHHHHH
Q 019899 295 PGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKV 329 (334)
Q Consensus 295 ~g~~~~~~~~~~iRi~~~~~~~~~l~~~l~~l~~~ 329 (334)
.|..||. ++.|+|+|+- .++++++.++++|..+
T Consensus 330 ~G~~fga-~~ryVRlSml-~~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 330 SGVLFGA-DSRYVRLSML-KRDDDFDQLLERLSKL 362 (363)
T ss_dssp EGGGGTS--TTEEEEESS-S-HHHHHHHHHHHHCC
T ss_pred CCCccCC-CCCeEEEecc-CCHHHHHHHHHHHHhh
Confidence 9999986 5789999987 7999999999999864
No 317
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.75 E-value=2e-15 Score=139.04 Aligned_cols=288 Identities=13% Similarity=0.086 Sum_probs=173.9
Q ss_pred CCCcEEEecCcHHHHHHHHHHhc------C-C-CCeEEecCCCCCChhh-hhhhccCcE------------EEEEeCCCC
Q 019899 16 DPSQIVLTAGATPAVEILCFCLA------D-H-GNALLVPSPYYPGFDR-DIRFRTGVE------------LIPVHCRST 74 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l~------~-~-gd~vl~~~p~~~~~~~-~~~~~~g~~------------v~~v~~~~~ 74 (334)
+.+.+++++++++|+..++.... . + ..+|+..+.+|.+..- .+. ..|.. +..++.+
T Consensus 150 ~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~s-lsg~~~~~~~~~~~~~~~~~~~~p-- 226 (504)
T PLN02760 150 KMGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISAS-LSGLPALHQKFDLPAPFVLHTDCP-- 226 (504)
T ss_pred CCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhh-ccCChhhccCCCCCCCCcEEeCCC--
Confidence 34579999999999999988762 1 2 3567777777766432 222 23321 1122221
Q ss_pred CCcc-------------ccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEEEEecccc
Q 019899 75 DNFA-------------FSITALDQAFNQARKRGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHVISDEIYG 140 (334)
Q Consensus 75 ~~~~-------------~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~ 140 (334)
+.+. ...+++++.+.+. ...++.+|++.......|.+. |.+.++++.++|++||+++|+||++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~T 304 (504)
T PLN02760 227 HYWRFHLPGETEEEFSTRLADNLENLILKE--GPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVIC 304 (504)
T ss_pred cccccCCCCCcHHHHHHHHHHHHHHHHHhc--CCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhh
Confidence 1111 1123455555421 112455555444466778765 56679999999999999999999997
Q ss_pred ccccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHH---------hhcccCCChHH
Q 019899 141 GSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKK---------LTRFCSISAPT 210 (334)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~---------~~~~~~~~~~~ 210 (334)
+|...|..+. ... .+...-+.+++|.+| .| +++|.+++ ++++.+.+.. +..+++.++.+
T Consensus 305 GfGRtG~~~a-~e~--------~gv~PDivtlgK~lg-gG~~PigAv~~-~~~i~d~~~~~~~~~~~~~h~~T~~gnPl~ 373 (504)
T PLN02760 305 AFGRLGTMFG-CDK--------YNIKPDLVSLAKALS-SAYMPIGAVLV-SPEISDVIHSQSNKLGSFAHGFTYSGHPVS 373 (504)
T ss_pred CCcccchhhH-HHh--------cCCCCcEEEeccccc-CCccccceEee-cHHHHhhhhcccccccCcccCCCCCCCHHH
Confidence 7654444221 111 111122567899997 66 48999998 7888888753 23356778888
Q ss_pred HHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CCcccCCCceeEEeeecCCcCCCCC-----hhhHHHHH
Q 019899 211 QRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL---GIRCSESSAGLYCWADMSGLIPSYS-----EKGELELW 282 (334)
Q Consensus 211 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---g~~~~~~~~g~~~~~~~~~~~~~~~-----~~~~~~~~ 282 (334)
..++.+.++..+ + +...++++++.+++.+.|+++ ++......-|.++.+.+........ ......+.
T Consensus 374 ~Aaala~Le~i~---~--~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~ 448 (504)
T PLN02760 374 CAVALEALKIYK---E--RNIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFG 448 (504)
T ss_pred HHHHHHHHHHHH---h--CCHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHHH
Confidence 888777775432 1 234455666666666666553 2211111224555566643211100 11133466
Q ss_pred HHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 283 DKLLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 283 ~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
.. +.++||.+.+.. +.+|++... ++++|++++++++.+++++
T Consensus 449 ~~-~~~~Gvl~~~~g-------~~lrl~Ppl~it~eeid~~~~~l~~al~~ 491 (504)
T PLN02760 449 AE-CKKRGMLVRVAG-------DNIMMSPPLIITPEEVDELISIYGKALKA 491 (504)
T ss_pred HH-HHhCCcEEEecC-------CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 66 445899987622 468998764 6999999999999998865
No 318
>PRK06062 hypothetical protein; Provisional
Probab=99.75 E-value=1.5e-15 Score=138.59 Aligned_cols=291 Identities=13% Similarity=0.118 Sum_probs=174.0
Q ss_pred CCCcEEEecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChhhhhhhccCc-----------EEEEEeCCCCCC--cc--
Q 019899 16 DPSQIVLTAGATPAVEILCFCLA--DHGNALLVPSPYYPGFDRDIRFRTGV-----------ELIPVHCRSTDN--FA-- 78 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~~g~-----------~v~~v~~~~~~~--~~-- 78 (334)
+.+.+++++++++|+..++.... ....+|+....+|.+......-..+. .+..++.+.... +.
T Consensus 111 ~~~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 190 (451)
T PRK06062 111 DLSKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHAT 190 (451)
T ss_pred CCCEEEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCC
Confidence 35789999999999999987642 23467888887777654332202221 112222211110 10
Q ss_pred cc-------HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcc
Q 019899 79 FS-------ITALDQAFNQARKRGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFV 150 (334)
Q Consensus 79 ~~-------~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~ 150 (334)
.| ++.+++.++.. ...++.+|++...+...|.+. +.+.++++.++|++||+++|+||++.+|...|..+.
T Consensus 191 ~~~~~~~~~~~~le~~l~~~--~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a 268 (451)
T PRK06062 191 TEEEECERALAHLERVIELE--GPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFA 268 (451)
T ss_pred ChHHHHHHHHHHHHHHHHhc--CCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHH
Confidence 12 56677777531 113566555554466778775 666799999999999999999999987644443211
Q ss_pred -hhhhhhhccccCCCcEEEEecccccCCCCCc-eEEEEeecCHHHHHHHHHh----hcccCCChHHHHHHHHhhCChHHH
Q 019899 151 -SMAEILEAEEVDKDRVHIIYGLSKDLSLPGF-RTGVIYSYNESVLAAAKKL----TRFCSISAPTQRLLISMLSDTKFI 224 (334)
Q Consensus 151 -~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~-r~g~i~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~ 224 (334)
....+ .+| +.+++|.++ .|. ++|.+++ ++++.+.+... ...++.++.+..++.+.++..+
T Consensus 269 ~~~~gv------~PD----i~t~gK~lg-gG~~Pigav~~-~~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~-- 334 (451)
T PRK06062 269 IEHFGV------VPD----LITFAKGVN-SGYVPLGGVAI-SEAIAATFADRPYPGGLTYSGHPLACAAAVATINAME-- 334 (451)
T ss_pred HHhcCC------CCC----eeeechhhh-cCCcCcEEEEE-cHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHH--
Confidence 11111 122 447899998 784 8999998 77888887532 2356678888777777765432
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHhC----CCcccCCCceeEEeeecCCcCCCCC--------hhhHHHHHHHHHHhcCe
Q 019899 225 QEYLETNKRRIKKLY-DSFVAGLKQL----GIRCSESSAGLYCWADMSGLIPSYS--------EKGELELWDKLLNIAKI 291 (334)
Q Consensus 225 ~~~~~~~~~~~~~~~-~~~~~~l~~~----g~~~~~~~~g~~~~~~~~~~~~~~~--------~~~~~~~~~~ll~~~gi 291 (334)
+ ....++.+++- +++.+.|++. +.......-|+++.+.+........ ......+...+ .++||
T Consensus 335 -~--~~l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv 410 (451)
T PRK06062 335 -E--EGIVENAARIGAEVLGPGLRELAERHPSVGEVRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAAC-KERGL 410 (451)
T ss_pred -h--cCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeEeccccEEEEEEcccccccCCCcccchhhHHHHHHHHHH-HHCCc
Confidence 1 12333344443 3455555443 2211112235555566532111000 01234566664 45899
Q ss_pred EEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 292 NVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 292 ~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
.+.+. .+.+|++.+. ++++|++++++++.+++++.
T Consensus 411 l~~~~-------~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~ 446 (451)
T PRK06062 411 LPFVN-------GNRIHVVPPCTVTEDEVREGLAILDAALAVA 446 (451)
T ss_pred EEeec-------CCEEEEECCccCCHHHHHHHHHHHHHHHHHh
Confidence 87641 2468998764 69999999999999998764
No 319
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.74 E-value=2.5e-15 Score=136.89 Aligned_cols=290 Identities=14% Similarity=0.131 Sum_probs=175.9
Q ss_pred CCCcEEEecCcHHHHHHHHHHhcC--------CCCeEEecCCCCCChhhh-hhhccC------------cEEEEEeCCCC
Q 019899 16 DPSQIVLTAGATPAVEILCFCLAD--------HGNALLVPSPYYPGFDRD-IRFRTG------------VELIPVHCRST 74 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l~~--------~gd~vl~~~p~~~~~~~~-~~~~~g------------~~v~~v~~~~~ 74 (334)
..+.+++++++++|+..++..... ...+|+....+|.+.... +. ..| ..+..+|..+.
T Consensus 105 ~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals-~tg~~~~~~~~~~~~~~~~~~p~~~~ 183 (442)
T PRK13360 105 GLNHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGIS-VGGIVPNRKAFGALLPGVDHLPHTLD 183 (442)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhh-ccCChhhhhccCCCCCCCEEeCCCch
Confidence 346899999999999998775421 235788888888775322 11 111 11233332110
Q ss_pred ---CCccc--------cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEEEEecccccc
Q 019899 75 ---DNFAF--------SITALDQAFNQARKRGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHVISDEIYGGS 142 (334)
Q Consensus 75 ---~~~~~--------~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~ 142 (334)
..+.. ..++++++++.. ...++.+|++...+...|.+. +.+.+++|.++|++||+++|+||++.++
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~ 261 (442)
T PRK13360 184 LARNAFSKGQPEHGAELADELERLVTLH--DASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGF 261 (442)
T ss_pred hhccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCC
Confidence 00110 245666666531 123555555554476778865 5667999999999999999999999776
Q ss_pred ccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHH---------hhcccCCChHHHH
Q 019899 143 IFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKK---------LTRFCSISAPTQR 212 (334)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~---------~~~~~~~~~~~~~ 212 (334)
...|..+.. +.. +..+| +.+++|.++ .| +++|.+++ ++++.+.+.. +...++.+++...
T Consensus 262 GrtG~~~a~--~~~---gv~PD----ivt~gK~l~-gG~~P~gav~~-~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~a 330 (442)
T PRK13360 262 GRLGAPFAA--QYF---GVTPD----LLTCAKGLT-NGAIPMGAVFV-SSEIHDAFMQGPEAGIEFFHGYTYSGHPLACA 330 (442)
T ss_pred CCCccchhh--hhc---CCCCc----eeeeeeccc-cCccceEEEEE-cHHHHHHhhcCCccccccccCCCCCCCHHHHH
Confidence 444443211 111 11122 337899997 66 78999998 8888877753 2234567888877
Q ss_pred HHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CcccC--CCceeEEeeecCCcCCCCChhhHHHHHHHHHHhc
Q 019899 213 LLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLG-IRCSE--SSAGLYCWADMSGLIPSYSEKGELELWDKLLNIA 289 (334)
Q Consensus 213 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 289 (334)
++.+.++..+ + ....++++++-+++.+.|+++. ..... ...|.+..+.+....... .....++...++ ++
T Consensus 331 aa~a~L~~l~---~--~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~~~-~~~~~~~~~~l~-~~ 403 (442)
T PRK13360 331 AALATLDLYE---R--EGLLTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVGAVELAPRDGKP-GKRAYEVFLKCF-EK 403 (442)
T ss_pred HHHHHHHHHH---h--CCHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEEecCCCCc-chhHHHHHHHHH-HC
Confidence 7777765322 1 1344566666677777776542 21111 112444344443221111 123346677754 48
Q ss_pred CeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 290 KINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 290 gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
||.+.++ .+.+|++... +|++++++++++|.+++++.
T Consensus 404 Gvl~~~~-------~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 404 GLMIRYT-------GDILALSPPLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred CcEEEec-------CCEEEEeCCCccCHHHHHHHHHHHHHHHHHh
Confidence 9998652 2469999764 69999999999999998753
No 320
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.74 E-value=4.6e-15 Score=135.46 Aligned_cols=286 Identities=16% Similarity=0.120 Sum_probs=177.2
Q ss_pred CCcEEEecCcHHHHHHHHHHhc--------CCCCeEEecCCCCCChhh-hhhhccCc------------EEEEEeCCCCC
Q 019899 17 PSQIVLTAGATPAVEILCFCLA--------DHGNALLVPSPYYPGFDR-DIRFRTGV------------ELIPVHCRSTD 75 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~--------~~gd~vl~~~p~~~~~~~-~~~~~~g~------------~v~~v~~~~~~ 75 (334)
.+.+++++++++|+..++.... ....+|+....+|.+... .+. ..|. .+..++.++..
T Consensus 114 ~~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals-~~~~~~~~~~~~~~~~~~~~~~~p~~~ 192 (453)
T PRK06943 114 LGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALG-VTDVALFKDAYDPLIRHAHVVASPDAR 192 (453)
T ss_pred CCEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhc-ccCChhhhcccccCCCCCEEECCCCcc
Confidence 3689999999999999987652 124678888888877542 222 2221 12233322111
Q ss_pred Cc----------cccHHHHHHHHHHHHHcCCceeEEEEeC-CCCCcccC-CCHHHHHHHHHHHHhcCcEEEEeccccccc
Q 019899 76 NF----------AFSITALDQAFNQARKRGVKVRGILICN-PANPVGNI-IPRETLYELLDFAREKNIHVISDEIYGGSI 143 (334)
Q Consensus 76 ~~----------~~~~~~l~~~l~~~~~~~~~~~~i~~~~-p~nptG~~-~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~ 143 (334)
+. .-+++++++.++. ++.++.+|++.- .+...|.+ .|.+.++++.++|++||+++|.||++.++.
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~G 269 (453)
T PRK06943 193 GARPGETAADVAARALADVRRLFAE---RAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCG 269 (453)
T ss_pred ccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCC
Confidence 00 0134666666653 234677676665 26667775 567789999999999999999999998875
Q ss_pred cCCCCcchhhhhhhccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHH--------hhcccCCChHHHHHH
Q 019899 144 FGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKK--------LTRFCSISAPTQRLL 214 (334)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 214 (334)
..|..+.. ... +..--+.+++|.++ .| +++|.++. ++++.+.+.. +..+++.|++...++
T Consensus 270 RtG~~fa~-~~~--------gv~PDivt~gKgl~-gG~~Pi~av~~-~~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa 338 (453)
T PRK06943 270 RTGTFFAC-EQA--------GVWPDFLCLSKGIS-GGYLPLSLVLS-RDAIFAAFYDDDVTRGFLHSHSYTGNPLACRAA 338 (453)
T ss_pred CCcchhHH-HhC--------CCCCCeEeeehhhc-cCcccceEEEE-cHHHHHhhcccCccCCccCCCCCCCCHHHHHHH
Confidence 54543221 111 11112335789998 88 59999998 8888887752 234566788888877
Q ss_pred HHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcC
Q 019899 215 ISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL----GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAK 290 (334)
Q Consensus 215 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g 290 (334)
.+.++..+ + ....++.+++-+++.+.|+++ ++.-+. .-|+++.+++...... .......+...+ .++|
T Consensus 339 ~a~L~~i~--~---~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vr-G~Gl~~gvel~~~~~~-~~~~~~~i~~~~-~~~G 410 (453)
T PRK06943 339 LATLDLFA--E---DDVLARNARKSARLRAALAPLAAHPQVRHLR-QRGTIFAFDVALDGDA-ARTFSRRFFEAA-LERE 410 (453)
T ss_pred HHHHHHHH--h---cCHHHHHHHHHHHHHHHHHHHhcCCCEEeEe-ccccEEEEEEccCCCc-chHHHHHHHHHH-HHCC
Confidence 77775432 1 123344555555666666553 122112 2355566666422111 111234566664 4589
Q ss_pred eEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 291 INVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 291 i~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
|.+.+.. +.+|++... ++++|+++++++|.+++++
T Consensus 411 ll~~~~g-------~~l~~~Ppl~it~~eid~~~~~l~~al~~ 446 (453)
T PRK06943 411 LLLRPIG-------TTVYLMPPYVLDDDEIAWLAERTRATLDA 446 (453)
T ss_pred cEEEecC-------CEEEEeCCCcCCHHHHHHHHHHHHHHHHH
Confidence 9987631 358998653 6999999999999999875
No 321
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.74 E-value=1.4e-15 Score=137.81 Aligned_cols=285 Identities=12% Similarity=0.091 Sum_probs=178.7
Q ss_pred CCCCCCcEEEecCcHHHHHHHHHHhcC--------CCCeEEecCCCCCChh-hhhhhccCc-------------EEEEEe
Q 019899 13 VSFDPSQIVLTAGATPAVEILCFCLAD--------HGNALLVPSPYYPGFD-RDIRFRTGV-------------ELIPVH 70 (334)
Q Consensus 13 ~~~~~~~i~~~~g~~~~~~~~~~~l~~--------~gd~vl~~~p~~~~~~-~~~~~~~g~-------------~v~~v~ 70 (334)
.+.+.+.+++++++++|+..++..... ...+|+....+|.+.. ..+. ..+- .+..+|
T Consensus 100 ~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s-~~~~~~~~~~~~~~~~~~~~~~~ 178 (429)
T PRK06173 100 LPPSLNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMS-VCDPVTGMHGLFNHSLPVQYFLP 178 (429)
T ss_pred CCCCcCEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhc-cCCCchhhhhcccccCCCCeEeC
Confidence 333456899999999999998776431 2357888888887642 2222 1110 122333
Q ss_pred CCCCC---C-ccccHHHHHHHHHHHHHcCCceeEEEEeCC-CCCcccC-CCHHHHHHHHHHHHhcCcEEEEecccccccc
Q 019899 71 CRSTD---N-FAFSITALDQAFNQARKRGVKVRGILICNP-ANPVGNI-IPRETLYELLDFAREKNIHVISDEIYGGSIF 144 (334)
Q Consensus 71 ~~~~~---~-~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~ 144 (334)
.+... . ..-+++.+++.++. .+.++.+|++... +...|.+ .|.+.++++.++|++||+++|+||++.++..
T Consensus 179 ~p~~~~~~~~~~~~l~~l~~~i~~---~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~Gr 255 (429)
T PRK06173 179 QPSIKFGEEWNDEAIEPLQDLLEQ---KGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGR 255 (429)
T ss_pred CCCcccchhHHHHHHHHHHHHHHh---CCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCc
Confidence 21110 0 01145666677753 2346776666643 6777876 5777899999999999999999999977544
Q ss_pred CCCCc-chhhhhhhccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHH-------hhcccCCChHHHHHHH
Q 019899 145 GNEEF-VSMAEILEAEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKK-------LTRFCSISAPTQRLLI 215 (334)
Q Consensus 145 ~~~~~-~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 215 (334)
.|..+ .....+ .+| + .+++|.++ .| +.++.++. ++++.+.+.. +..+++.+++...++.
T Consensus 256 tG~~~a~~~~gv------~PD--i--v~~gK~l~-gG~~p~~a~~~-~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~ 323 (429)
T PRK06173 256 TGKLFALEHAGV------VPD--I--MCIGKALT-GGYLTLSATIT-TEAIAQTICSGEAKCFMHGPTFMANPLACAIAA 323 (429)
T ss_pred CCcchHHHhcCC------CCC--E--EEeehhhh-CCccccceEEe-cHHHHHHHhcCCCCccccCCCCCcCHHHHHHHH
Confidence 44332 111111 122 2 24899997 78 47888988 8888887753 2233456777777777
Q ss_pred HhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCC--CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeE
Q 019899 216 SMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSES--SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKIN 292 (334)
Q Consensus 216 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~ 292 (334)
+.++.. ++ ....++++++-+++.+.|++. ++..... ..|.+..+.+.... ....+... +.++||.
T Consensus 324 a~l~~i---~~--~~~~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel~~~~------~~~~i~~~-l~e~Gi~ 391 (429)
T PRK06173 324 ESIRLL---LE--SPWQQNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEMKEPV------NMATLQPR-FVEHGIW 391 (429)
T ss_pred HHHHHH---Hh--CCHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEeCCcc------cHHHHHHH-HHHCCeE
Confidence 666432 21 123556677777777777754 3332211 23566666665321 23466666 5558999
Q ss_pred EcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 293 VTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 293 v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
+.+.. +.+|+..+- ++++++++++++|.+++++
T Consensus 392 v~~~g-------~~l~~~Ppl~it~~ei~~~~~~l~~~l~~ 425 (429)
T PRK06173 392 VRPFG-------KLVYIMPPFIISPDELSQLTSGLLRVLKQ 425 (429)
T ss_pred EEecC-------CEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 87631 478998774 6999999999999999865
No 322
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.74 E-value=4.3e-17 Score=140.17 Aligned_cols=283 Identities=15% Similarity=0.168 Sum_probs=199.2
Q ss_pred CcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCC-
Q 019899 18 SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGV- 96 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~- 96 (334)
+-+++..| -..+...+.+++.+|.-|+.++..|.++...++ +.|+.++.+. +.|+++|++.|++....|.
T Consensus 199 ~a~vF~mG-f~TNs~~~p~l~~~gsLIiSDelNHaSi~~GaR-LSgAtiRVfk-------HNdm~~LEr~Lrd~I~~gqP 269 (519)
T KOG1357|consen 199 DAIVFSMG-FATNSMNIPSLLGKGSLIISDELNHASLITGAR-LSGATTRVFR-------HNDMQGLERLLRDAIVYGQP 269 (519)
T ss_pred ceEEEecc-ccccccCcceeecCCcceeeccccchheecccc-ccCceEEEEe-------cCCHHHHHHHHHHHHhcCCC
Confidence 44555554 667777888999999999999999999999999 9999988887 3489999999998865432
Q ss_pred c-----eeEEEEeCC-CCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccC--CCCcchhhhhhhccccCCCcEEE
Q 019899 97 K-----VRGILICNP-ANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFG--NEEFVSMAEILEAEEVDKDRVHI 168 (334)
Q Consensus 97 ~-----~~~i~~~~p-~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 168 (334)
+ -+.+++... ...-|.+.+ +.+++++++++..+++.||+|+....+ |.....+...++ .+.++.
T Consensus 270 ~Thrp~kki~iivegiysmEg~iv~---Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~-----~dvDIm 341 (519)
T KOG1357|consen 270 KTHRPWKKILICVEGIYSMEGTIVD---LPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDP-----EDVDIM 341 (519)
T ss_pred CcCCcchheeeeeccceeccCeecc---cHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCc-----hhheee
Confidence 1 133444444 458888988 999999999999999999999986653 333344554444 677889
Q ss_pred EecccccCCCCCceEEEEeecCHHHHHHHHHhhcc--c--CCChHHHHHHHHhhCC--hHHHHHHHHHHHHHHHHHHHHH
Q 019899 169 IYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--C--SISAPTQRLLISMLSD--TKFIQEYLETNKRRIKKLYDSF 242 (334)
Q Consensus 169 ~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~ 242 (334)
+++|+|++|..| |++.+ ++++.+.++..... + ..+++........++. ++...+..++..+++.++..++
T Consensus 342 MGtftKSfga~G---Gyiag-sk~lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yf 417 (519)
T KOG1357|consen 342 MGTFTKSFGAAG---GYIAG-SKELIDYLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYF 417 (519)
T ss_pred cceehhhccccc---ceecC-cHHHHhhhccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHH
Confidence 999999998666 77776 89999998875443 2 2333333333333321 1111334567778899999999
Q ss_pred HHHHHhCCCcccCCCceeE--EeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCC-cCCCCCCeEEEEecC-CCccc
Q 019899 243 VAGLKQLGIRCSESSAGLY--CWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSA-CHCIEPGWFRCCFTS-LTHED 318 (334)
Q Consensus 243 ~~~l~~~g~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~-~~~~~~~~iRi~~~~-~~~~~ 318 (334)
+..|++.|+.+...+.... +.+..|..+ ..+-+.|++ .+|.+..+.+ ..+--....|+|.++ .+.|+
T Consensus 418 r~~l~~~gfivyG~~dSpVvplll~~~~k~--------~~f~r~~l~-~nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ 488 (519)
T KOG1357|consen 418 RWELQKMGFIVYGNNDSPVVPLLLYGPAKI--------VAFSREMLE-RNIGVVVVGFPATPLLESRARFCLSASHTKED 488 (519)
T ss_pred HHhhhcCcEEEecCCCCCcceeeecCcccc--------cHHHHHHHh-cCceEEEEeCCCchHHHhHHHhhhcccccHHH
Confidence 9999999999887666532 222333322 366677666 5665543333 222234678999885 69999
Q ss_pred HHHHHHHHHHHH
Q 019899 319 IPLVIERIQKVA 330 (334)
Q Consensus 319 l~~~l~~l~~~~ 330 (334)
++.+++.+.++-
T Consensus 489 ld~~l~~i~~~g 500 (519)
T KOG1357|consen 489 LDRALEVIDRVG 500 (519)
T ss_pred HHHHHHHHhhhc
Confidence 999999988764
No 323
>PRK07046 aminotransferase; Validated
Probab=99.73 E-value=2.3e-15 Score=137.31 Aligned_cols=277 Identities=16% Similarity=0.130 Sum_probs=166.9
Q ss_pred CCcEEEecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChhhhhhhc--c----------Cc------EEEEEeCCCCCC
Q 019899 17 PSQIVLTAGATPAVEILCFCLA--DHGNALLVPSPYYPGFDRDIRFR--T----------GV------ELIPVHCRSTDN 76 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~--~----------g~------~v~~v~~~~~~~ 76 (334)
.+.+.+++++++|+..++.... ...++|+....+|.+..+..... . |. .+..+|.
T Consensus 130 ~~~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----- 204 (453)
T PRK07046 130 LPYWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF----- 204 (453)
T ss_pred CCEEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCC-----
Confidence 5789999999999999987652 34578888888888763221100 0 10 1111111
Q ss_pred ccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCC-HHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhh
Q 019899 77 FAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIP-RETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEI 155 (334)
Q Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~-~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~ 155 (334)
.|++.+++.+.. .++.+|++...+...|.+.+ .+.++++.++|++||+++|.||++. |..+-.+......+
T Consensus 205 --nd~~~l~~~l~~-----~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg~~~~~gv 276 (453)
T PRK07046 205 --NDLAALEAALAD-----GDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGGYTRAHGL 276 (453)
T ss_pred --CCHHHHHHHhCC-----CCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCcchhHHhCC
Confidence 278888888842 35665555433555566554 4579999999999999999999986 32211112222221
Q ss_pred hhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHH-----------hhcccCCChHHHHHHHHhhCChHHH
Q 019899 156 LEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKK-----------LTRFCSISAPTQRLLISMLSDTKFI 224 (334)
Q Consensus 156 ~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~~~~ 224 (334)
. + -+.+++|.+| .|+++|.+++ ++++.+.+.. +...++.|+.+..+..+.++..+
T Consensus 277 ~------P----Di~t~gK~lg-gG~Pi~av~g-~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~-- 342 (453)
T PRK07046 277 E------P----DFLVVGKPIA-GGVPCAVYGF-SAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVM-- 342 (453)
T ss_pred C------c----cceeehhhhc-CCCcceeeee-hHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHh--
Confidence 1 2 2346899998 8999999998 8888888753 12345678888777777765321
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH----HhCCCccc-CCCceeEEeeecCC-cCCCC-------ChhhHHHHHHHHHHhcCe
Q 019899 225 QEYLETNKRRIKKLYDSFVAGL----KQLGIRCS-ESSAGLYCWADMSG-LIPSY-------SEKGELELWDKLLNIAKI 291 (334)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~l----~~~g~~~~-~~~~g~~~~~~~~~-~~~~~-------~~~~~~~~~~~ll~~~gi 291 (334)
+ ....+++.++-+++.+.| ++.++... ...+. .+.+.+.. ..... ...-...+...+++ +||
T Consensus 343 ~---~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~G~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gv 417 (453)
T PRK07046 343 T---EAAYAHMLALAARLAAGLRAVIARHGLPWHVTRVGA-RVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLN-RGV 417 (453)
T ss_pred c---ccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCc-EEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHH-CCC
Confidence 1 112233333344444444 34454432 22222 23333321 11100 11112345566555 799
Q ss_pred EEcCCCCcCCCCCCeEEEEecCCCcccHHHHHHHHHHHHHHc
Q 019899 292 NVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 292 ~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
.+.|.. +.++++.. ++++|++++++++.+++++.
T Consensus 418 ~~~~~~-------~~~~~~p~-~t~~did~~~~~~~~~l~~~ 451 (453)
T PRK07046 418 LITPFH-------NMMLVCPA-TTAADVDRLVAAFDACLGEL 451 (453)
T ss_pred EEeccc-------CcEEEeCC-CCHHHHHHHHHHHHHHHHHH
Confidence 987621 34778876 89999999999999998763
No 324
>PRK06148 hypothetical protein; Provisional
Probab=99.73 E-value=5.2e-15 Score=146.86 Aligned_cols=301 Identities=11% Similarity=0.083 Sum_probs=183.0
Q ss_pred CCCCCCcEEEecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChhhhhhhccC------------cEEEEEeCCCC--CC
Q 019899 13 VSFDPSQIVLTAGATPAVEILCFCLA--DHGNALLVPSPYYPGFDRDIRFRTG------------VELIPVHCRST--DN 76 (334)
Q Consensus 13 ~~~~~~~i~~~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~~g------------~~v~~v~~~~~--~~ 76 (334)
.+...+.+++++++++|+..++.... ....+|+....+|.+.........+ ..+..++.++. ..
T Consensus 676 ~p~~~~~v~f~nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 755 (1013)
T PRK06148 676 LPDGLTVAFFVNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGP 755 (1013)
T ss_pred CCCCcCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccC
Confidence 33334689999999999999987652 2345788888877765432210111 11111121100 00
Q ss_pred ccc--------cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEEEEeccccccccCCC
Q 019899 77 FAF--------SITALDQAFNQARKRGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHVISDEIYGGSIFGNE 147 (334)
Q Consensus 77 ~~~--------~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~ 147 (334)
+.. ..+.+++.++.....+.++.+|++.......|.+. |.+.++++.++|+++|+++|.||++.+|...|.
T Consensus 756 ~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~ 835 (1013)
T PRK06148 756 ERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGS 835 (1013)
T ss_pred CCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCC
Confidence 110 12445666654333344667666554465566654 667799999999999999999999988754443
Q ss_pred CcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHH---hhcccCCChHHHHHHHHhhCChHHH
Q 019899 148 EFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKK---LTRFCSISAPTQRLLISMLSDTKFI 224 (334)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~ 224 (334)
.+..... .+..--+.+++|.+| .|+++|.+++ ++++.+.+.. +..+++.|+.+..++.+.++..+
T Consensus 836 ~~~a~e~--------~gv~PDivt~gK~lg-gG~Plgav~~-~~ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~-- 903 (1013)
T PRK06148 836 HWWAFET--------QGVVPDIVTMGKPIG-NGHPMGAVVT-TREIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIE-- 903 (1013)
T ss_pred cchhhhh--------cCCCcceeeeccccc-CCcceEEEEE-cHHHHhhccCCCccccCCCCCHHHHHHHHHHHHHHh--
Confidence 2111111 122223456899998 8999999998 8888887753 33556778888888777765432
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC----CCcccCCCceeEEeeecCCcCCCC--ChhhHHHHHHHHHHhcCeEEcCCCC
Q 019899 225 QEYLETNKRRIKKLYDSFVAGLKQL----GIRCSESSAGLYCWADMSGLIPSY--SEKGELELWDKLLNIAKINVTPGSA 298 (334)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~l~~~----g~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~ll~~~gi~v~~g~~ 298 (334)
+ +...++.+++-+++.+.|+++ ++......-|.++.+++....... .......+...++ ++||.+.+...
T Consensus 904 ~---e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~g~ 979 (1013)
T PRK06148 904 D---EDLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLFLGIELVTDRKTKAPATAIARYVKNGAR-ERGILIGTEGP 979 (1013)
T ss_pred h---ccHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeeceEEEEEecCCccccCccHHHHHHHHHHHH-hCCeEEeccCC
Confidence 1 133444555556666666553 322112223566666664321111 1122345666644 48999976432
Q ss_pred cCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 299 CHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 299 ~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
..+.+|+..+. ++++++++++++|.+++++.
T Consensus 980 ----~~~vlr~~Ppl~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 980 ----HDNVLKIRPPLIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred ----CCCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 14678998774 69999999999999998763
No 325
>PRK07481 hypothetical protein; Provisional
Probab=99.73 E-value=5.6e-15 Score=134.97 Aligned_cols=292 Identities=15% Similarity=0.102 Sum_probs=173.3
Q ss_pred CCcEEEecCcHHHHHHHHHHhcC--------CCCeEEecCCCCCChhhh-hhhccCc------------EEEEEeCCCCC
Q 019899 17 PSQIVLTAGATPAVEILCFCLAD--------HGNALLVPSPYYPGFDRD-IRFRTGV------------ELIPVHCRSTD 75 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~~--------~gd~vl~~~p~~~~~~~~-~~~~~g~------------~v~~v~~~~~~ 75 (334)
.+.+++++++++|+..++..... ...+|+....+|.+.... +. ..+. .+..++.+...
T Consensus 104 ~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s-~~~~~~~~~~~~~~~~g~~~~~~~~~~ 182 (449)
T PRK07481 104 MRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGAS-VNGNTVFRRNYEPLLPGCFHVETPWLY 182 (449)
T ss_pred CCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhc-cCCCcccccccCCCCCCCEEeCCCccc
Confidence 45899999999999999876421 235788888888774332 22 1111 12223221100
Q ss_pred C--cc-ccHHHHHHHH----HHHH--HcCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEEEEeccccccccC
Q 019899 76 N--FA-FSITALDQAF----NQAR--KRGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHVISDEIYGGSIFG 145 (334)
Q Consensus 76 ~--~~-~~~~~l~~~l----~~~~--~~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~ 145 (334)
. +. .|.+.+++.+ ++.- .+.+++.+|++...+...|.+. +.+.++++.++|++||+++|.||++.+|...
T Consensus 183 ~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRt 262 (449)
T PRK07481 183 RNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRT 262 (449)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcC
Confidence 0 11 1344433222 2111 1224567666665477778755 5667999999999999999999999886544
Q ss_pred CCCcchhhhhhhccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHH---------hhcccCCChHHHHHHH
Q 019899 146 NEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKK---------LTRFCSISAPTQRLLI 215 (334)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~ 215 (334)
|..+.. ... +..+| +.+++|.++ .| +++|.+++ ++++.+.+.. +..+++.|+++..++.
T Consensus 263 G~~~a~-~~~----gv~PD----iv~~gKgl~-gG~~Pi~av~~-~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~ 331 (449)
T PRK07481 263 GSWFGS-RGW----GVKPD----IMCLAKGIT-SGYVPLGATMV-NARIADAFEANADFGGAIMHGYTYSGHPVACAAAL 331 (449)
T ss_pred chhhHh-hhc----CCCCC----EEEEeeccc-CCCcCceEEEE-cHHHHHHHhccCccccccccCCCCCCCHHHHHHHH
Confidence 432211 111 11122 345789998 78 58999998 7888887753 2334667888887777
Q ss_pred HhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CCcccCCCceeEEeeecCCcCCCC-----ChhhHHHHHHHHH
Q 019899 216 SMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL----GIRCSESSAGLYCWADMSGLIPSY-----SEKGELELWDKLL 286 (334)
Q Consensus 216 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----g~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~~~~~~ll 286 (334)
+.++..+ + ....++.+++-+++.+.|++. ++......-|.++.+++....... .......+...++
T Consensus 332 a~L~~l~--~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (449)
T PRK07481 332 ATLDIVV--R---EDLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLVADKATREPIDPSKGYANAVADVAR 406 (449)
T ss_pred HHHHHHH--h---hhHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEecccccccCCCCchhHHHHHHHHHHH
Confidence 7765422 1 123344555555566666553 222112223556666664321100 0112335666644
Q ss_pred HhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 287 NIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 287 ~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
++||.+.+.. +.+|++... +|++|++++++.+.+++++.
T Consensus 407 -~~Gvl~~~~g-------~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 407 -ENGVLVRPSG-------TKIILSPPLVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred -hCCeEEEecC-------CEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 4899997632 248888664 59999999999999999764
No 326
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.73 E-value=5.8e-15 Score=135.13 Aligned_cols=292 Identities=11% Similarity=0.066 Sum_probs=173.8
Q ss_pred CCcEEEecCcHHHHHHHHHHhcC-------C-CCeEEecCCCCCChhhhhhhccCc------------EEEEEeCCCCC-
Q 019899 17 PSQIVLTAGATPAVEILCFCLAD-------H-GNALLVPSPYYPGFDRDIRFRTGV------------ELIPVHCRSTD- 75 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~~-------~-gd~vl~~~p~~~~~~~~~~~~~g~------------~v~~v~~~~~~- 75 (334)
.+.+++++++++|+..++..... + ..+|+....+|.+......-..|. .+..+|.++..
T Consensus 129 ~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~ 208 (472)
T PRK08742 129 LSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYL 208 (472)
T ss_pred CCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccc
Confidence 35899999999999998876521 2 367888888887754332202221 12233321100
Q ss_pred -Ccc--------ccHHHHHHHHHHHHHcCCceeEEEEeC-CCCCcccC-CCHHHHHHHHHHHHhcCcEEEEecccccccc
Q 019899 76 -NFA--------FSITALDQAFNQARKRGVKVRGILICN-PANPVGNI-IPRETLYELLDFAREKNIHVISDEIYGGSIF 144 (334)
Q Consensus 76 -~~~--------~~~~~l~~~l~~~~~~~~~~~~i~~~~-p~nptG~~-~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~ 144 (334)
... .+++.+++.++. ...++.+|++.. .++..|.+ .|.+.++++.++|++||+++|.||++.+|..
T Consensus 209 ~~~~~~~~~~~~~~~~~l~~~~~~---~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGR 285 (472)
T PRK08742 209 AEPGQSAEDYALQAADALQALFEQ---SPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGR 285 (472)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCC
Confidence 001 124555666642 223666666554 26667774 5677899999999999999999999988765
Q ss_pred CCCCcchhhhhhhccccCCCcEEEEecccccCCCCCc-eEEEEeecCHHHHHHHHH--------hhcccCCChHHHHHHH
Q 019899 145 GNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGF-RTGVIYSYNESVLAAAKK--------LTRFCSISAPTQRLLI 215 (334)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~-r~g~i~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~ 215 (334)
.|..+..- . .+..--+.+++|.++ .|. ++|.+++ ++++.+.+.. +..+++.+++...++.
T Consensus 286 tG~~~a~e-~--------~gv~PDiv~~gKgl~-gG~~Plaav~~-~~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~ 354 (472)
T PRK08742 286 TGTLFACE-Q--------AGVMPDLLCLSKGLT-GGFLPLSAVLA-TQQLYDAFLDDSRERAFLHSHSYTGNPLACAAAL 354 (472)
T ss_pred CccchHHH-h--------cCCCCCEEEEccccc-CCCCCcceeec-cHHHHHHhhccCccCccCcCCCCCccHHHHHHHH
Confidence 55433211 1 111122335789998 784 8999998 8888877742 2345667888887777
Q ss_pred HhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCCh-----hhHHHHHHHHHHhcC
Q 019899 216 SMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSE-----KGELELWDKLLNIAK 290 (334)
Q Consensus 216 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~-----~~~~~~~~~ll~~~g 290 (334)
+.++..+ ++.+.++.+++.+....+.+.+.++++-.....-|+++.+++......... .....+...+ .++|
T Consensus 355 a~L~~i~--~~~l~~~~~~~g~~l~~~~~~~~~~~~i~dvRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~-~~~G 431 (472)
T PRK08742 355 ATLDIFA--DDDVIARNQPTAARMTQLAAQIGEHPHVADVRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAA-LARG 431 (472)
T ss_pred HHHHHHH--HCCHHHHHHHHHHHHHHHHHHHhcCCCeeeEeccceEEEEEeccCccccccCCchhHHHHHHHHHH-HHCC
Confidence 7775432 222222222222222233333433332111223466666766432211111 1123455664 4589
Q ss_pred eEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 291 INVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 291 i~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
|.+.+. .+.+||..+- ++++++++++++|.+++++
T Consensus 432 ll~~~~-------g~vi~~~PpL~it~~ei~~~~~~l~~~l~~ 467 (472)
T PRK08742 432 VVLRPL-------GDVLYWMPPYCVDEAQLALLADTTRHAIDE 467 (472)
T ss_pred eEEEec-------CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 999762 1479998774 6999999999999999875
No 327
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.73 E-value=3.7e-15 Score=135.06 Aligned_cols=287 Identities=13% Similarity=0.097 Sum_probs=170.5
Q ss_pred CCcEEEecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChhhh----hhhccCcEE----EEE--eCCCCCC---ccccH
Q 019899 17 PSQIVLTAGATPAVEILCFCLA--DHGNALLVPSPYYPGFDRD----IRFRTGVEL----IPV--HCRSTDN---FAFSI 81 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~~~----~~~~~g~~v----~~v--~~~~~~~---~~~~~ 81 (334)
.+.+++++++++|+..++.... ....+|+....+|.+..+. .. ..+... ..+ +...... ...|+
T Consensus 110 ~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 188 (433)
T PRK00615 110 DHKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGIS-FSETSLDTLTHLVDTDLAHPLTLSLPYNDF 188 (433)
T ss_pred cCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccc-cCCCCcCcCCCCCCCCCCCCCeEeCCCCCH
Confidence 4689999999999999987652 2345788888888775421 11 111100 000 0000000 01268
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCC-HHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIP-RETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~-~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
+.+++.+++. +.++.+|++.......|.+.+ .+.+++|.++|++||+++|+||++.++ ..|... ..+.. +
T Consensus 189 ~~l~~~l~~~---~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~~g--a~~~~---g 259 (433)
T PRK00615 189 QIFQTVMNSL---GHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQGG--AAAIY---H 259 (433)
T ss_pred HHHHHHHHhc---CCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccHhH--HHHhc---C
Confidence 8888888643 235565555444666787665 567999999999999999999999766 333211 11111 1
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh-----hcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL-----TRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRI 235 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 235 (334)
..++ + .+++|.+| .|+.+|++++ ++++.+.+... ...++.++....++.+.++..+ + ....+++
T Consensus 260 v~PD--i--~~~gK~lg-gG~p~~av~~-~~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~---~--~~~~~~~ 328 (433)
T PRK00615 260 VKPD--I--TVYGKILG-GGLPAAAVVA-HKSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCR---E--QGFYTQL 328 (433)
T ss_pred CCCC--e--EEEccccc-CCcceeeeee-cHHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHh---c--ccHHHHH
Confidence 1122 2 35899998 7888999998 88888887532 2234557777777666664322 1 1233444
Q ss_pred HHHHHHHHHHH----HhCCCcccCCCceeEEeeecCCcCCC-------CChhhHHHHHHHHHHhcCeEEcCCCCcCCCCC
Q 019899 236 KKLYDSFVAGL----KQLGIRCSESSAGLYCWADMSGLIPS-------YSEKGELELWDKLLNIAKINVTPGSACHCIEP 304 (334)
Q Consensus 236 ~~~~~~~~~~l----~~~g~~~~~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~ 304 (334)
+++-+++.+.| ++.|+.+.....|.++.+.+...... ...+....+...|++ +||.+.|....
T Consensus 329 ~~~g~~l~~~l~~~~~~~g~~v~~~r~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~~----- 402 (433)
T PRK00615 329 STLEQNFLSPIEEMIRSQGFPVSLVRYGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFS-KGVYLSPSPFE----- 402 (433)
T ss_pred HHHHHHHHHHHHHHHHHcCCCeEEEeeceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHH-CCeeecCcccc-----
Confidence 44455554444 44455432222465666666532110 011223356677445 89999875421
Q ss_pred CeEEEEecCCCcccHHHHHHHHHHHHHH
Q 019899 305 GWFRCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 305 ~~iRi~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
.+ =++.. .+++||+++++++.+++++
T Consensus 403 ~~-~ls~~-ht~~did~~~~a~~~~~~~ 428 (433)
T PRK00615 403 AS-FLSSA-HSMENLDYAQNVLIDSLEK 428 (433)
T ss_pred cc-ceecC-CCHHHHHHHHHHHHHHHHH
Confidence 11 14444 6999999999999999876
No 328
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.73 E-value=7.5e-15 Score=134.35 Aligned_cols=292 Identities=16% Similarity=0.073 Sum_probs=174.6
Q ss_pred cEEEe-cCcHHHHHHHHHHhc--CCCCeEEecCCCCCChhhhhhhccC------------cEEEEEeCCCCCC--c----
Q 019899 19 QIVLT-AGATPAVEILCFCLA--DHGNALLVPSPYYPGFDRDIRFRTG------------VELIPVHCRSTDN--F---- 77 (334)
Q Consensus 19 ~i~~~-~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~~g------------~~v~~v~~~~~~~--~---- 77 (334)
.++++ +++++|+..++.... ....+|+....+|.+......-..| .++..+|.++... +
T Consensus 128 ~v~f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 207 (464)
T PRK06938 128 KIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGG 207 (464)
T ss_pred eEEEeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCch
Confidence 56565 799999999987652 2346788888777765432220111 1233444321110 0
Q ss_pred ----cccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchh
Q 019899 78 ----AFSITALDQAFNQARKRGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSM 152 (334)
Q Consensus 78 ----~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~ 152 (334)
..+++.+++.+++......++.+|++...+...|.+. |.+.++++.++|++||+++|.||++.+|...|..+. .
T Consensus 208 ~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a-~ 286 (464)
T PRK06938 208 EAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFA-F 286 (464)
T ss_pred hhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHH-H
Confidence 1236677777764321222566665554366667765 577899999999999999999999988754443221 1
Q ss_pred hhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHH--HhhcccCCChHHHHHHHHhhCChHHHHHHHHH
Q 019899 153 AEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAK--KLTRFCSISAPTQRLLISMLSDTKFIQEYLET 230 (334)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 230 (334)
.. .+..--+.+++|.++ .|+++|.++. ++++ +.+. .+..+++.|+++..++.+.++..+ + ++
T Consensus 287 e~--------~gv~PDiv~~gKglg-gG~PlsAv~~-~~~~-~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~--~---~~ 350 (464)
T PRK06938 287 EH--------AGIIPDVVVLSKAIG-GSLPLAVVVY-REWL-DTWQPGAHAGTFRGNQMAMAAGSATLRYIK--E---HR 350 (464)
T ss_pred Hh--------cCCCCCEEEeecccc-CCCceEEEee-hhHh-hccCCCCCCCCCCcCHHHHHHHHHHHHHHH--H---hH
Confidence 11 111122345789998 8899999998 5554 5443 234556788888888777775432 1 12
Q ss_pred HHHHHHHHHHHHHHHHHhC----CCcccCCCceeEEeeecCCcCCC--------CChhhHHHHHHHHHHhcCeEEcCCCC
Q 019899 231 NKRRIKKLYDSFVAGLKQL----GIRCSESSAGLYCWADMSGLIPS--------YSEKGELELWDKLLNIAKINVTPGSA 298 (334)
Q Consensus 231 ~~~~~~~~~~~~~~~l~~~----g~~~~~~~~g~~~~~~~~~~~~~--------~~~~~~~~~~~~ll~~~gi~v~~g~~ 298 (334)
..++.+++-+++.+.|+++ ++......-|+++.+++...... ........+...++ ++|+.+.++..
T Consensus 351 l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~g~ 429 (464)
T PRK06938 351 LAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECL-RRGLILELGGR 429 (464)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHH-HCCeEEeecCC
Confidence 3334444455555555443 32222223356666766432110 01112334666644 58999876432
Q ss_pred cCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 299 CHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 299 ~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
+ .+.+|+..+. ++++|++++++++.+++++
T Consensus 430 ~----~~~l~~~Ppl~it~~eid~~~~~l~~~l~~ 460 (464)
T PRK06938 430 H----GSVVRFLPPLIITAEQIDEVAEIFAEAVAA 460 (464)
T ss_pred C----CCEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 2 3679998664 6999999999999999865
No 329
>PRK06105 aminotransferase; Provisional
Probab=99.73 E-value=7.6e-15 Score=134.41 Aligned_cols=295 Identities=14% Similarity=0.110 Sum_probs=176.8
Q ss_pred CCCCCCcEEEecCcHHHHHHHHHHhc--------CCCCeEEecCCCCCChhhhhhhccCc------------EEEEEeCC
Q 019899 13 VSFDPSQIVLTAGATPAVEILCFCLA--------DHGNALLVPSPYYPGFDRDIRFRTGV------------ELIPVHCR 72 (334)
Q Consensus 13 ~~~~~~~i~~~~g~~~~~~~~~~~l~--------~~gd~vl~~~p~~~~~~~~~~~~~g~------------~v~~v~~~ 72 (334)
++.+.+.+++++++++|+..++.... ....+|+....+|.+......-..+. .+..++.+
T Consensus 105 ~p~~~~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p 184 (460)
T PRK06105 105 APVPMSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCP 184 (460)
T ss_pred CCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCC
Confidence 33345689999999999999988742 12357888777776644322101221 12222221
Q ss_pred CCCCc-----------cccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEEEEecccc
Q 019899 73 STDNF-----------AFSITALDQAFNQARKRGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHVISDEIYG 140 (334)
Q Consensus 73 ~~~~~-----------~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~ 140 (334)
+...+ ....+++++.+... ..+++.+|++...+...|.+. |.+.++++.++|++||+++|+||++.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~le~~~~~~--~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~t 262 (460)
T PRK06105 185 HYYRFGLPGESEEAFATRLANELEALILAE--GPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVIC 262 (460)
T ss_pred cccccccCCCChHHHHHHHHHHHHHHHHHc--CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEecccc
Confidence 10000 01235566665421 113566555554477778764 77789999999999999999999997
Q ss_pred ccccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHH---------hhcccCCChHH
Q 019899 141 GSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKK---------LTRFCSISAPT 210 (334)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~---------~~~~~~~~~~~ 210 (334)
++...|..+. .... +..+| +.+++|.++ .| +++|.+++ ++++.+.+.. +...++.|+++
T Consensus 263 G~GRtG~~f~-~~~~----~v~PD----i~~~gK~lg-gG~~P~~av~~-~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~ 331 (460)
T PRK06105 263 GFGRTGNMFG-CETF----GIKPD----ILVMSKQLS-SSYQPLSAVLM-NEKVYDPIADESGKIGTFGHGFTASGHPVA 331 (460)
T ss_pred CCCcCchhhh-HHhc----CCCCC----eeeeecccc-cCcccceEEEE-cHHHHHHHhcccccCcccccCCCCCCCHHH
Confidence 7654444321 1111 11122 447899998 66 68999998 7888887753 22345678888
Q ss_pred HHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CCcccCCCceeEEeeecCCcCCCC-----ChhhHHHHH
Q 019899 211 QRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL---GIRCSESSAGLYCWADMSGLIPSY-----SEKGELELW 282 (334)
Q Consensus 211 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---g~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~~~~ 282 (334)
..++.+.++..+ + ....++++++-+++.+.|+++ ++......-|++..+++....... .......+.
T Consensus 332 ~aaa~a~L~~i~---~--~~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~ 406 (460)
T PRK06105 332 AAVALENLAIIE---E--RDLVGNAAERGARLQARLRALADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGARAN 406 (460)
T ss_pred HHHHHHHHHHHH---h--ccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHHHH
Confidence 777777764322 1 234455566666666666554 211111223555556663221110 011123566
Q ss_pred HHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 283 DKLLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 283 ~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
.. +.++||.+.|. .+.+|++... ++++|++++++++.+++++.
T Consensus 407 ~~-~~~~Gvl~~~~-------g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 450 (460)
T PRK06105 407 AA-AHEHGVISRAM-------GDTLAFCPPLIITAAQVDEMVDRFGRALDDV 450 (460)
T ss_pred HH-HHHCCeEEEec-------CCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 66 44589999763 1478998774 59999999999999998763
No 330
>PRK06917 hypothetical protein; Provisional
Probab=99.73 E-value=1.2e-14 Score=132.72 Aligned_cols=305 Identities=13% Similarity=0.096 Sum_probs=178.6
Q ss_pred hhcCCCCCCCCcEEEecCcHHHHHHHHHHhc--------CCCCeEEecCCCCCChhhhhhhccCc------------EEE
Q 019899 8 VLGQAVSFDPSQIVLTAGATPAVEILCFCLA--------DHGNALLVPSPYYPGFDRDIRFRTGV------------ELI 67 (334)
Q Consensus 8 ~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~--------~~gd~vl~~~p~~~~~~~~~~~~~g~------------~v~ 67 (334)
++...++...+.+++++++++|+..++.... ....+|+....+|.+......-..+. .+.
T Consensus 82 ~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~ 161 (447)
T PRK06917 82 KLSDLSPGDLNWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYP 161 (447)
T ss_pred HHHHhCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCe
Confidence 3333333334689999999999999988652 12367888888887754432202221 112
Q ss_pred EEeCCCCCCc----------cccHHHHHHHHHHHHHcCCceeEEEEeCCCC-CcccC-CCHHHHHHHHHHHHhcCcEEEE
Q 019899 68 PVHCRSTDNF----------AFSITALDQAFNQARKRGVKVRGILICNPAN-PVGNI-IPRETLYELLDFAREKNIHVIS 135 (334)
Q Consensus 68 ~v~~~~~~~~----------~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~n-ptG~~-~~~~~l~~i~~~~~~~~~~vi~ 135 (334)
.++.+..... .-+++.+++.++.. ...++.+|++..... ..|.+ .+.+.++.+.++|++||+++|+
T Consensus 162 ~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~--~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~ 239 (447)
T PRK06917 162 TISAPYCYRCPVQKVYPTCQLACATELETAIERI--GAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIA 239 (447)
T ss_pred EeCCCcccccccCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEE
Confidence 2221111000 01235556666531 112566565554344 44554 4677899999999999999999
Q ss_pred eccccccccCCCCcc-hhhhhhhccccCCCcEEEEecccccCCCCCc-eEEEEeecCHHHHHHHHHh------hcccCCC
Q 019899 136 DEIYGGSIFGNEEFV-SMAEILEAEEVDKDRVHIIYGLSKDLSLPGF-RTGVIYSYNESVLAAAKKL------TRFCSIS 207 (334)
Q Consensus 136 D~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~-r~g~i~~~~~~~~~~~~~~------~~~~~~~ 207 (334)
||++.+|...|..+. ....+ .+| +.+++|.++ .|. ++|.+++ ++++.+.+... ..+++.|
T Consensus 240 DEv~tGfGRtG~~~a~~~~gv------~PD----i~~~gK~l~-~G~~Pi~a~~~-~~~i~~~~~~~~~~~~~~~T~~gn 307 (447)
T PRK06917 240 DEVMTGLGRTGAMFAMEHWGV------EPD----IMTLGKGLG-AGYTPIAATVV-SDRVMEPILRGSRSIMSGHTLSAN 307 (447)
T ss_pred echhhCcCcccchhhHHhcCC------CCC----EEEeeehhc-cCCcceEEEEE-cHHHHHHHhccCcccccccCCCCC
Confidence 999987644443221 11111 122 346899998 785 8999998 78888877532 2345678
Q ss_pred hHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CCcccCCCceeEEeeecCCcCCCC-----ChhhH
Q 019899 208 APTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL----GIRCSESSAGLYCWADMSGLIPSY-----SEKGE 278 (334)
Q Consensus 208 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----g~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~ 278 (334)
++...++.+.++..+ + ....++++++-+++.+.|+++ ++......-|.++.+++....... .....
T Consensus 308 pl~~aaa~a~l~~l~--~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~ 382 (447)
T PRK06917 308 PLSAATALAVLEYME--K---HNLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVA 382 (447)
T ss_pred HHHHHHHHHHHHHHH--H---CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecceEEEEEEeccCCcCCCCcchhHHH
Confidence 888877777765422 1 123445555556666666553 322112223555556653211100 01123
Q ss_pred HHHHHHHHHhcCeEEcCCCC-cCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 279 LELWDKLLNIAKINVTPGSA-CHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 279 ~~~~~~ll~~~gi~v~~g~~-~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
..+...++ ++||.+.|... ......+.+|++.+- ++++|++++++++.+++++
T Consensus 383 ~~~~~~~~-~~Gvl~~~~~~~~~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~ 437 (447)
T PRK06917 383 SELISVAA-KNGLLLYPAVAGQDGKEGDAVIIAPPMTITYSELDELLSIFAKSVEE 437 (447)
T ss_pred HHHHHHHH-hCCcEEEecccccCCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHH
Confidence 45666644 48999987421 111124678998764 6999999999999999865
No 331
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.73 E-value=2.2e-15 Score=136.89 Aligned_cols=282 Identities=14% Similarity=0.108 Sum_probs=176.4
Q ss_pred CCCcEEEecCcHHHHHHHHHHhcC--------CCCeEEecCCCCCChhhhhhhccCcE-------------EEEEeCCCC
Q 019899 16 DPSQIVLTAGATPAVEILCFCLAD--------HGNALLVPSPYYPGFDRDIRFRTGVE-------------LIPVHCRST 74 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l~~--------~gd~vl~~~p~~~~~~~~~~~~~g~~-------------v~~v~~~~~ 74 (334)
.-+.+++++++++++..++..... ...+|+....+|.+....+.-..+.. +..++.+.
T Consensus 104 ~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~- 182 (427)
T TIGR00508 104 ALDCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQ- 182 (427)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCC-
Confidence 346899999999999988875431 13578888888876543222022211 11222110
Q ss_pred CCc-----cccHHHHHHHHHHHHHcCCceeEEEEeCC-CCCccc-CCCHHHHHHHHHHHHhcCcEEEEeccccccccCCC
Q 019899 75 DNF-----AFSITALDQAFNQARKRGVKVRGILICNP-ANPVGN-IIPRETLYELLDFAREKNIHVISDEIYGGSIFGNE 147 (334)
Q Consensus 75 ~~~-----~~~~~~l~~~l~~~~~~~~~~~~i~~~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~ 147 (334)
..+ .-|++++++.++.. +.++.+|++... +...|. ..+.+.++++.++|++||+++|+||++.++...|.
T Consensus 183 ~~~~~~~~~~~~~~l~~~l~~~---~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~ 259 (427)
T TIGR00508 183 NRFDEEWNEEAITPLAKLMELH---SDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGK 259 (427)
T ss_pred ccccchhHHHHHHHHHHHHHhc---CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc
Confidence 111 12566777777542 235665555542 555666 44788999999999999999999999977655454
Q ss_pred Ccch-hhhhhhccccCCCcEEEEecccccCCCCCc-eEEEEeecCHHHHHHHHH-------hhcccCCChHHHHHHHHhh
Q 019899 148 EFVS-MAEILEAEEVDKDRVHIIYGLSKDLSLPGF-RTGVIYSYNESVLAAAKK-------LTRFCSISAPTQRLLISML 218 (334)
Q Consensus 148 ~~~~-~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~-r~g~i~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l 218 (334)
.+.. ...+. ++ ++ +++|.++ .|+ .++.++. ++++.+.++. +..++..+++...++.+.+
T Consensus 260 ~~~~~~~~v~------pD--i~--~~gK~l~-gG~~p~~a~~~-~~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l 327 (427)
T TIGR00508 260 LFACEHAGVV------PD--IL--CVGKALT-GGYMTLSATVT-TDKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASL 327 (427)
T ss_pred cchhhhcCCC------CC--EE--Eechhhh-cCcccceEEEE-cHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHH
Confidence 3222 22221 22 22 4799996 784 7888887 8888888864 2234456777777777776
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc-ccCC--CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcC
Q 019899 219 SDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIR-CSES--SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTP 295 (334)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~-~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~ 295 (334)
+..+ + ....++++++.+++.+.|++++.. .... .-|.++.+.+... .....+...++ ++||.+.+
T Consensus 328 ~~l~---~--~~~~~~~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~~~------~~~~~~~~~l~-~~Gv~~~~ 395 (427)
T TIGR00508 328 AILL---E--GEWQKQVSAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMYKP------VNVEELQKKFV-EQGVWIRP 395 (427)
T ss_pred HHHH---h--CCHHHHHHHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEECCc------cCHHHHHHHHH-HCCeEEEe
Confidence 5321 1 123466777777788877765321 1111 1245555666432 12356777744 48999865
Q ss_pred CCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 296 GSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 296 g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
.. +.+|++... ++++|++++++++.+++++
T Consensus 396 ~~-------~~l~~~ppl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 396 FG-------KLIYVMPPYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred cC-------CEEEEECCCCCCHHHHHHHHHHHHHHHhc
Confidence 32 368998774 6999999999999999864
No 332
>PRK06149 hypothetical protein; Provisional
Probab=99.73 E-value=1.1e-14 Score=144.60 Aligned_cols=304 Identities=15% Similarity=0.174 Sum_probs=180.4
Q ss_pred hhcCCCCCCCCcEEEecCcHHHHHHHHHHh--cCCCCeEEecCCCCCChhhhh-hhccC-----c--------EEEEEeC
Q 019899 8 VLGQAVSFDPSQIVLTAGATPAVEILCFCL--ADHGNALLVPSPYYPGFDRDI-RFRTG-----V--------ELIPVHC 71 (334)
Q Consensus 8 ~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l--~~~gd~vl~~~p~~~~~~~~~-~~~~g-----~--------~v~~v~~ 71 (334)
++...++-..+.+++++++++|+..++... .....+|+....+|.+..... . ..+ . .+..++.
T Consensus 632 ~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~-~s~~~~~~~~~~~~~~~~v~~~~~ 710 (972)
T PRK06149 632 RLAALAPDGLDTVFLVNSGSEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDA-VSTSIADNPQALETRPDWVHPVES 710 (972)
T ss_pred HHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhh-hcCCccccccccCCCCCCeEEeCC
Confidence 343334334568999999999999998843 123456777777776533211 1 100 0 1223332
Q ss_pred CCCCC--cc-cc-----HHHHHHHHHHHHHcCCceeEEEEeCCCCCccc-CCCHHHHHHHHHHHHhcCcEEEEecccccc
Q 019899 72 RSTDN--FA-FS-----ITALDQAFNQARKRGVKVRGILICNPANPVGN-IIPRETLYELLDFAREKNIHVISDEIYGGS 142 (334)
Q Consensus 72 ~~~~~--~~-~~-----~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~-~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~ 142 (334)
++... +. .+ .+++++.++.....+.++.+|++.......|. ..+.+.++++.++|++||+++|+||++.+|
T Consensus 711 p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGf 790 (972)
T PRK06149 711 PNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGY 790 (972)
T ss_pred CcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcC
Confidence 11111 11 11 35555566544333446665555544555565 456777999999999999999999999776
Q ss_pred ccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHH---hhcccCCChHHHHHHHHhhC
Q 019899 143 IFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKK---LTRFCSISAPTQRLLISMLS 219 (334)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~ 219 (334)
...|..+..+... +..+| +.+++|.+| .|..+|++++ ++++.+.+.. +.+.++.|+.+..++.+.++
T Consensus 791 GRtG~~~~a~e~~----gv~PD----ivt~gK~lg-~G~Pl~av~~-~~~i~~~~~~~~~~~sT~~gnP~~~aaala~L~ 860 (972)
T PRK06149 791 GRLGHYFWGFEQQ----GVVPD----IITMAKGMG-NGHPLGAVIT-RREIAEALEAEGYFFSSTGGSPVSCRIGMAVLD 860 (972)
T ss_pred CccCccchhhhhc----CCCCC----EEEeccccc-CCeeeEEEEE-cHHHHhhhccCCcccCCCCCCHHHHHHHHHHHH
Confidence 5444322222111 11122 337899998 8899999998 8888888763 22334678888887777765
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CCcccCCCceeEEeeecCCcCCC--CChhhHHHHHHHHHHhcCeEE
Q 019899 220 DTKFIQEYLETNKRRIKKLYDSFVAGLKQL----GIRCSESSAGLYCWADMSGLIPS--YSEKGELELWDKLLNIAKINV 293 (334)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----g~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~gi~v 293 (334)
..+ + +.+.++.+++-+++.+.|+++ ++......-|+++.+++...... ........+...+++ +||.+
T Consensus 861 ~i~--~---e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~-~Gvl~ 934 (972)
T PRK06149 861 VLR--E---EKLQENARRVGDHLKARLEALADRHPLIGAVHGMGLYLGVELVRDRQTLEPATEETAAICDRLLE-LGVIM 934 (972)
T ss_pred HHH--h---cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecceEEEEEEecCcccCCCChHHHHHHHHHHHh-CCeEE
Confidence 432 1 133444555556666666553 32211222355666666321111 111223456777555 89999
Q ss_pred cCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 294 TPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 294 ~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
.|... ..+.+||...- +++++++.+++++.+++++
T Consensus 935 ~~~g~----~~~vl~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 935 QPTGD----HLNILKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred eecCC----CCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 77421 24678987663 6999999999999999875
No 333
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.73 E-value=3.6e-15 Score=135.93 Aligned_cols=290 Identities=15% Similarity=0.145 Sum_probs=175.9
Q ss_pred CCCcEEEecCcHHHHHHHHHHhc------C--CCCeEEecCCCCCChhhh-hhhccC------------cEEEEEeCCC-
Q 019899 16 DPSQIVLTAGATPAVEILCFCLA------D--HGNALLVPSPYYPGFDRD-IRFRTG------------VELIPVHCRS- 73 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l~------~--~gd~vl~~~p~~~~~~~~-~~~~~g------------~~v~~v~~~~- 73 (334)
..+.+++++++++|+..++.... . ...+|+....+|.+.... +. ..| ..+..+|..+
T Consensus 108 ~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals-~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (445)
T PRK09221 108 GLDHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGIS-VGGIVNNRKMFGGLLPGVDHLPHTLD 186 (445)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhc-cCCChhhhhccCCCCCCCeEeCCCcc
Confidence 34689999999999999887542 1 235788888888765322 21 111 1122333211
Q ss_pred CC--Ccc--------ccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEEEEecccccc
Q 019899 74 TD--NFA--------FSITALDQAFNQARKRGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHVISDEIYGGS 142 (334)
Q Consensus 74 ~~--~~~--------~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~ 142 (334)
.. .+. ...+++++.++.. ..+++.+|++...+...|.+. +.+.++++.++|++||+++|+||++.++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~ 264 (445)
T PRK09221 187 LPENAFSKGQPEHGAELADDLERLVALH--DASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGF 264 (445)
T ss_pred ccccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCC
Confidence 00 000 1135666666531 113566666655477788865 4567999999999999999999999875
Q ss_pred ccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHH---------hhcccCCChHHHH
Q 019899 143 IFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKK---------LTRFCSISAPTQR 212 (334)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~---------~~~~~~~~~~~~~ 212 (334)
...|..+. .... +..+| +.+++|.++ .| +++|.+++ ++++.+.+.. +...++.+++...
T Consensus 265 GRtG~~~~-~~~~----gv~PD----i~~~gK~l~-gG~~Pi~av~~-~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~a 333 (445)
T PRK09221 265 GRLGAAFA-AERF----GVTPD----IITFAKGLT-NGAIPMGAVIA-SDEIYDAFMQGPEYAIEFFHGYTYSAHPVACA 333 (445)
T ss_pred CcCchhhH-HHhc----CCCCC----EEEeccccc-cCcccceeeEE-cHHHHHhhccCcccccccccccCCCcCHHHHH
Confidence 54443221 1111 11122 347899997 66 67999988 7888877642 1234567777776
Q ss_pred HHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCccc--CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhc
Q 019899 213 LLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCS--ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIA 289 (334)
Q Consensus 213 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 289 (334)
++.+.++..+ + ....++++++.+++.+.|+++ ..... ...-|.+..+.+...... .......+...++ ++
T Consensus 334 aa~a~L~~i~---~--~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~~~-~~~~~~~~~~~~~-~~ 406 (445)
T PRK09221 334 AGLATLDIYR---E--EDLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLVAGIELAPRPGA-PGARGYEAFMKCF-EK 406 (445)
T ss_pred HHHHHHHHHH---h--ccHHHHHHHHHHHHHHHHHhhccCCCEEEEecCceEEEEEEeccccc-ccchHHHHHHHHH-HC
Confidence 6666654322 1 134556677777777777764 22211 112344455555432111 0112346677744 58
Q ss_pred CeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 290 KINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 290 gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
||.+.++ .+.+|++... ++++++++++++|.+++++.
T Consensus 407 Gv~~~~~-------~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 407 GLLVRYT-------GDTIALSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred CeEEeec-------CCEEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 9998652 2479999764 69999999999999998763
No 334
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.73 E-value=1.4e-15 Score=134.45 Aligned_cols=271 Identities=13% Similarity=0.100 Sum_probs=178.7
Q ss_pred EEEecCcHHHHHHHHHHhc-CCCCeEEecCCCCCCh-h-hhhhhccCc-EEEEEeCCCCCCccccHHHHHHHHHHHHHcC
Q 019899 20 IVLTAGATPAVEILCFCLA-DHGNALLVPSPYYPGF-D-RDIRFRTGV-ELIPVHCRSTDNFAFSITALDQAFNQARKRG 95 (334)
Q Consensus 20 i~~~~g~~~~~~~~~~~l~-~~gd~vl~~~p~~~~~-~-~~~~~~~g~-~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~ 95 (334)
++++.++|.++.+++.+++ ++|++|++.. .|..- . +.++ .+|. ++..+.. +.+..+++++++.
T Consensus 61 ~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG~r~~~eia~-~~g~~~v~~l~~--~~g~~~~~~~ve~--------- 127 (374)
T TIGR01365 61 GIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFGKGWVTDVTK-QLKLPDVRVLEA--EYGKLPDLKKVDF--------- 127 (374)
T ss_pred EEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHHHHHHHHHHH-hcCCCCcEEEcC--CCCCCCCHHHcCC---------
Confidence 5668889999999999998 5888898864 44443 3 5566 7888 4777765 5677889999873
Q ss_pred CceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEeccccc
Q 019899 96 VKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKD 175 (334)
Q Consensus 96 ~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~ 175 (334)
+ +.+.+++..+.||+..| +++++..+ ++.++++|.+-+. +.....+ .+.+++++|..|.
T Consensus 128 -~-~~v~~vhnETSTGv~np---v~~i~~~~--~~~lliVDavSs~----g~~~l~~----------d~iDv~~tgsQK~ 186 (374)
T TIGR01365 128 -K-NDVVFTWNGTTSGVRVP---NGDFIPAD--REGLTICDATSAA----FAQDLDY----------HKLDVVTFSWQKV 186 (374)
T ss_pred -C-CCEEEecCCCchheecc---cccccccc--CCCcEEEEccchh----cCCCCCh----------hHCcEEEEechhc
Confidence 1 12678888899999999 55544322 5899999988654 2122232 2355778899999
Q ss_pred CCCCCceEEEEeecCHHHHHHHHHhh----------------------cccCCChHHHHHHHHhhCChHHHHH--HHHHH
Q 019899 176 LSLPGFRTGVIYSYNESVLAAAKKLT----------------------RFCSISAPTQRLLISMLSDTKFIQE--YLETN 231 (334)
Q Consensus 176 ~~~~g~r~g~i~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~ 231 (334)
++.|+ .+++++. +++..++.+... ...+.+++...++..++...+++.+ -++.+
T Consensus 187 L~~pp-Gls~v~v-s~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~ 264 (374)
T TIGR01365 187 LGGEG-AHGMLIL-SPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPL 264 (374)
T ss_pred cCCCC-ceEEEEE-CHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHH
Confidence 97554 5788888 666655544210 1123344444444444443333333 37888
Q ss_pred HHHHHHHHHHHHHHHHhCC-CcccCC----CceeEEeeecCCc-CC---CCChhh-HHHHHHHHHHhcCeEEcCCCCcCC
Q 019899 232 KRRIKKLYDSFVAGLKQLG-IRCSES----SAGLYCWADMSGL-IP---SYSEKG-ELELWDKLLNIAKINVTPGSACHC 301 (334)
Q Consensus 232 ~~~~~~~~~~~~~~l~~~g-~~~~~~----~~g~~~~~~~~~~-~~---~~~~~~-~~~~~~~ll~~~gi~v~~g~~~~~ 301 (334)
.++++++++.+++.++++| +.+... .....+.+.++.+ ++ .....+ ..++... ++++||.+.+|..-
T Consensus 265 ~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~gi~i~~G~~~-- 341 (374)
T TIGR01365 265 IARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKELIST-LEKEGVAYDIGSYR-- 341 (374)
T ss_pred HHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCccccccccchhhHHHHHHHHH-HHHCCEEEeccccc--
Confidence 9999999999999999998 665542 2333344566443 21 000011 3566666 55679999887753
Q ss_pred CCCCeEEEEec-CCCcccHHHHHHHHHHH
Q 019899 302 IEPGWFRCCFT-SLTHEDIPLVIERIQKV 329 (334)
Q Consensus 302 ~~~~~iRi~~~-~~~~~~l~~~l~~l~~~ 329 (334)
..+..+||+.. .++++|++.+++.|.=+
T Consensus 342 ~~~~~fRIg~~G~i~~~di~~l~~~l~~~ 370 (374)
T TIGR01365 342 DAPSGLRIWCGATVEKSDLECLCPWLDWA 370 (374)
T ss_pred cCCCceEEecCCcCCHHHHHHHHHHHHHH
Confidence 23578999855 58999999999988644
No 335
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.73 E-value=5.9e-15 Score=134.29 Aligned_cols=279 Identities=16% Similarity=0.141 Sum_probs=173.0
Q ss_pred CCcEEEecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChhhhhhhccCcE-------------------EEEEeCCCCC
Q 019899 17 PSQIVLTAGATPAVEILCFCLA--DHGNALLVPSPYYPGFDRDIRFRTGVE-------------------LIPVHCRSTD 75 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~~g~~-------------------v~~v~~~~~~ 75 (334)
.+.+++++++++|+..++.... ....+|+....+|.+......-..|.. +..+|
T Consensus 109 ~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 183 (428)
T PRK12389 109 LEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVP----- 183 (428)
T ss_pred CcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcC-----
Confidence 5789999999999999987642 234678888888877543322022211 11111
Q ss_pred CccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEEEEeccccccccCCCCc-chhh
Q 019899 76 NFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHVISDEIYGGSIFGNEEF-VSMA 153 (334)
Q Consensus 76 ~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~-~~~~ 153 (334)
..|++.+++.+++. +.++.+|++.......|.+. +.+.++++.++|++||+++|+||++.+| ..+... ....
T Consensus 184 --~~d~~~l~~~l~~~---~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~-Rt~~~~a~~~~ 257 (428)
T PRK12389 184 --FNDIEALKEALDKW---GDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAF-RFMYGGAQDLL 257 (428)
T ss_pred --CCCHHHHHHHHHhc---CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCcchhhHHh
Confidence 12688888888642 23566566554477778766 5667999999999999999999999876 222211 1111
Q ss_pred hhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHH-----hhcccCCChHHHHHHHHhhCChHHHHHHH
Q 019899 154 EILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKK-----LTRFCSISAPTQRLLISMLSDTKFIQEYL 228 (334)
Q Consensus 154 ~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 228 (334)
.+ .+| +.+++|.++ .|+++|.+++ ++++.+.+.. +..+++.|++...++.+.++..+ +
T Consensus 258 gv------~PD----ivt~gK~lg-gG~Pi~av~~-~~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~---~-- 320 (428)
T PRK12389 258 GV------EPD----LTALGKIIG-GGLPIGAYGG-RKDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQ---Q-- 320 (428)
T ss_pred CC------CCC----eeeechhhc-CCCceeEEeE-HHHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHh---c--
Confidence 11 122 347899998 8899999988 8888888753 23345678888777777765322 1
Q ss_pred HHHHHHHHHHHHHHHHHHHh----CCCcccC-CCceeEEeeecCCc-CCC------CChhhHHHHHHHHHHhcCeEEcCC
Q 019899 229 ETNKRRIKKLYDSFVAGLKQ----LGIRCSE-SSAGLYCWADMSGL-IPS------YSEKGELELWDKLLNIAKINVTPG 296 (334)
Q Consensus 229 ~~~~~~~~~~~~~~~~~l~~----~g~~~~~-~~~g~~~~~~~~~~-~~~------~~~~~~~~~~~~ll~~~gi~v~~g 296 (334)
+...++++++-+++.+.|++ +++.... ...|++ .+.+... ... ........+... +.++||.+.+.
T Consensus 321 ~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~g~~-gi~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~~~~~ 398 (428)
T PRK12389 321 EGVYEKLDRLGAMLEEGILEAAEKHGITITINRLKGAL-TVYFTDEKVTNYDQAERSDGEAFGKFFKL-MLNQGINLAPS 398 (428)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCcEE-EEEEeCCCCCChhhhcccCHHHHHHHHHH-HHHCCcEeecC
Confidence 12344555556666666654 3432221 223433 3444321 110 011123456666 44589999874
Q ss_pred CCcCCCCCCeEEEEecCCCcccHHHHHHHHHHHHHH
Q 019899 297 SACHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 297 ~~~~~~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
. .+.+.+++. .+++|++++++++.+++++
T Consensus 399 ~------~~~~~~~l~-~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 399 K------YEAWFLTTA-HTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred C------CCCeeecCC-CCHHHHHHHHHHHHHHHHh
Confidence 2 122445554 7999999999999999875
No 336
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.72 E-value=8.2e-15 Score=134.02 Aligned_cols=287 Identities=11% Similarity=0.074 Sum_probs=171.5
Q ss_pred CCcEEEecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChh-hhhhhccCc------------EEEEEeCCCCCC--cc-
Q 019899 17 PSQIVLTAGATPAVEILCFCLA--DHGNALLVPSPYYPGFD-RDIRFRTGV------------ELIPVHCRSTDN--FA- 78 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~-~~~~~~~g~------------~v~~v~~~~~~~--~~- 78 (334)
.+.+++++++++|+..++.... ....+|+....+|.+.. ..+. ..|. .+..+|.++... +.
T Consensus 130 ~~~v~f~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (459)
T PRK06082 130 LNRVLFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAIS-VGGEACFRQGMGPLMAGVERIPPAVSYRGAFPD 208 (459)
T ss_pred CCEEEECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHh-hcCCcccccCCCCCCCCCEEeCCCcccccccCC
Confidence 4689999999999999887642 23467887777776643 2332 2221 122233211000 00
Q ss_pred c------cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcc-h
Q 019899 79 F------SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFV-S 151 (334)
Q Consensus 79 ~------~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~-~ 151 (334)
. +++.+++.++. .+++.+|++...++..+...+.+.++++.++|++||+++|+||++.++...|..+. .
T Consensus 209 ~~~~~~~~~~~l~~~i~~----~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e 284 (459)
T PRK06082 209 ADGSDVHYADYLEYVIEK----EGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQ 284 (459)
T ss_pred hhHHHHHHHHHHHHHHhc----CCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhH
Confidence 0 13445666643 12565555544366545567778899999999999999999999987654443222 1
Q ss_pred hhhhhhccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHH--hhcccCCChHHHHHHHHhhCChHHHHHHH
Q 019899 152 MAEILEAEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKK--LTRFCSISAPTQRLLISMLSDTKFIQEYL 228 (334)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 228 (334)
...+ .+| + .+++|.++ .| +++|.+++ ++++.+.+.. ....++.++++..++.+.++..+ +
T Consensus 285 ~~gv------~PD--i--v~~gKgl~-gG~~P~~av~~-~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~---~-- 347 (459)
T PRK06082 285 AYGI------EPD--I--LCIGKGLG-GGLVPIAAMIT-KDKYNTAAQISLGHYTHEKSPLGCAAALATIEVIE---Q-- 347 (459)
T ss_pred hhCC------CCC--E--EEeccccc-CCCCcceEEEE-cHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHH---h--
Confidence 1111 122 2 24899998 77 58999998 6676544321 11355678888777777665322 1
Q ss_pred HHHHHHHHHHHHHHHHHHHhC----CCcccCCCceeEEeeecCCcCCCC--ChhhHHHHHHHHHHhcCeEEcCCCCcCCC
Q 019899 229 ETNKRRIKKLYDSFVAGLKQL----GIRCSESSAGLYCWADMSGLIPSY--SEKGELELWDKLLNIAKINVTPGSACHCI 302 (334)
Q Consensus 229 ~~~~~~~~~~~~~~~~~l~~~----g~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~ll~~~gi~v~~g~~~~~~ 302 (334)
....++++++-+++.+.|+++ ++......-|.++.+++....... .......+...++ ++|+.+.+..
T Consensus 348 ~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~~----- 421 (459)
T PRK06082 348 EGLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIGLLWGVELVTDRHTKERAYDEAEAVLYRCL-NNGLSFKVSQ----- 421 (459)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeeccceeEEEEccCccccCccHHHHHHHHHHHH-hCCCEEEecC-----
Confidence 134455666666666666553 322111223555666664321111 1112335566644 5899987631
Q ss_pred CCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 303 EPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 303 ~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
.+.+|++... +++++++++++++.+++.+
T Consensus 422 -~~~i~~~Ppl~it~~eid~~~~~l~~~l~~ 451 (459)
T PRK06082 422 -GNVIQLSPPLIITREELTQALAILEEAIAK 451 (459)
T ss_pred -CCEEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 3679998764 6999999999999998865
No 337
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.72 E-value=9.7e-15 Score=132.23 Aligned_cols=282 Identities=15% Similarity=0.103 Sum_probs=172.1
Q ss_pred CCCcEEEecCcHHHHHHHHHHhcC--------CCCeEEecCCCCCChhhh-hhhccCc-------------EEEEEeCCC
Q 019899 16 DPSQIVLTAGATPAVEILCFCLAD--------HGNALLVPSPYYPGFDRD-IRFRTGV-------------ELIPVHCRS 73 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l~~--------~gd~vl~~~p~~~~~~~~-~~~~~g~-------------~v~~v~~~~ 73 (334)
..+.+++++++++|+..++..... ...+|+....+|.+.... +. ..+. .+..+|.++
T Consensus 99 ~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als-~~~~~~~~~~~~~~~~~~~~~~p~~~ 177 (422)
T PRK05630 99 GLDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMS-VCDPEGGMHSLWKGTLPEQIFAPAPP 177 (422)
T ss_pred CcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhc-cCCCcccccccccccCCCCeEcCCCc
Confidence 356899999999999988875421 235788888888764322 22 2121 122333221
Q ss_pred CCCcc-cc----HHHHHHHHHHHHHcCCceeEEEEeCC-CCCcccCC-CHHHHHHHHHHHHhcCcEEEEeccccccccCC
Q 019899 74 TDNFA-FS----ITALDQAFNQARKRGVKVRGILICNP-ANPVGNII-PRETLYELLDFAREKNIHVISDEIYGGSIFGN 146 (334)
Q Consensus 74 ~~~~~-~~----~~~l~~~l~~~~~~~~~~~~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~ 146 (334)
..... -+ .+.+++.+.+ ++.+|++... +...|.+. |.+.++++.++|++||+++|+||++.++...|
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~------~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG 251 (422)
T PRK05630 178 VRGSSPQEISEYLRSLELLIDE------TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTG 251 (422)
T ss_pred ccCCChHHHHHHHHHHHHHHhh------ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCc
Confidence 10000 01 2233333332 6776666642 66778754 56689999999999999999999997764444
Q ss_pred CCcchhhhhhhccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHH--------hhcccCCChHHHHHHHHh
Q 019899 147 EEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKK--------LTRFCSISAPTQRLLISM 217 (334)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~ 217 (334)
..+. .... +..+| +.+++|.++ .| ..+|++++ ++++.+.+.. +..+++.++....++.+.
T Consensus 252 ~~~a-~~~~----gv~PD----i~t~gK~l~-gG~~p~~av~~-~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aa 320 (422)
T PRK05630 252 ELFA-TLAA----GVTPD----IMCVGKALT-GGFMSFAATLC-TDKVAQLISTPNGGGALMHGPTFMANPLACAVAHAS 320 (422)
T ss_pred hhhH-HHhc----CCCCC----eeeeechhh-cCccccceeec-cHHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHH
Confidence 3221 1111 11122 227899996 67 47899998 8888887753 234566788888777777
Q ss_pred hCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccC--CCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEc
Q 019899 218 LSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSE--SSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVT 294 (334)
Q Consensus 218 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~ 294 (334)
++..+ + ....++++++.+++.+.|+++ ...... ..-|.+..+++.... +...+... +.++|+.+.
T Consensus 321 L~~l~---~--~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vRg~Gl~~~ie~~~~~------~~~~~~~~-~~~~Gl~~~ 388 (422)
T PRK05630 321 LEIIE---T--GMWRKQVKRIEAELIAGLSPLAHLPGVADVRVLGAIGVVEMEQPV------DMEEATQA-AVDHGVWLR 388 (422)
T ss_pred HHHHH---h--CcHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccccEEEEEECCcc------cHHHHHHH-HHHCCeEEE
Confidence 65432 1 122345555566666666543 111111 112666667775321 13456666 445899986
Q ss_pred CCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHHcC
Q 019899 295 PGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAETCK 334 (334)
Q Consensus 295 ~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~~ 334 (334)
+. .+.+|+..+- ++++++++++++|.++++..+
T Consensus 389 ~~-------g~~l~~~PpL~it~~~i~~~~~~l~~al~~~~ 422 (422)
T PRK05630 389 PF-------GRLVYVMPPYITTSEQIAQICAALAAAVKAKQ 422 (422)
T ss_pred ec-------CCEEEEECCccCCHHHHHHHHHHHHHHHhccC
Confidence 52 1478988764 699999999999999987653
No 338
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.72 E-value=4.1e-15 Score=145.12 Aligned_cols=297 Identities=12% Similarity=0.096 Sum_probs=184.0
Q ss_pred hhhhhhhhcCCCCCCCCcEEEec-CcHHHHHHHHHHh----cCCCC----eEEecCCCCCChhhhhhhccCcEEEEEeCC
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTA-GATPAVEILCFCL----ADHGN----ALLVPSPYYPGFDRDIRFRTGVELIPVHCR 72 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~-g~~~~~~~~~~~l----~~~gd----~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~ 72 (334)
.+|+.+..| . +++.+.. ++++|....+.++ .++|+ +|+++...|++....+. ..|.+++.++++
T Consensus 548 q~~l~eltG----~--d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~-~~G~~vv~v~~d 620 (954)
T PRK05367 548 EAWLAEITG----Y--DAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAV-MAGMKVVVVACD 620 (954)
T ss_pred HHHHHHHHC----C--CCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHH-HCCCEEEEECCC
Confidence 356666555 3 3555555 4555553333232 24554 69999999998888888 899999999984
Q ss_pred CCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchh
Q 019899 73 STDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSM 152 (334)
Q Consensus 73 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~ 152 (334)
.+..+|+++|++++++. ..++.+|++++|++-.+...| +++|+++|+++|+++++|.++..... .+
T Consensus 621 --~~G~iD~~~L~~~i~~~---~~~la~V~it~pst~G~~e~~---I~eI~~i~h~~G~~v~VDgA~~~al~------~l 686 (954)
T PRK05367 621 --ENGNIDLDDLRAKAEEH---ADNLAAIMITYPSTHGVFEET---IREICEIVHEHGGQVYLDGANMNAQV------GL 686 (954)
T ss_pred --CCCCcCHHHHHHHHhcc---CCCeEEEEEEcCCCCeeecCC---HHHHHHHHHHcCCEEEEECcChhhcc------CC
Confidence 33589999999998752 125778889998876554577 99999999999999999999853211 11
Q ss_pred hhhhhccccCCCcEEEEecccccCCC----CCceEEEEeecCHHHHHHHHHhh--------cccCCC--hHHHH--H--H
Q 019899 153 AEILEAEEVDKDRVHIIYGLSKDLSL----PGFRTGVIYSYNESVLAAAKKLT--------RFCSIS--APTQR--L--L 214 (334)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~s~sK~~~~----~g~r~g~i~~~~~~~~~~~~~~~--------~~~~~~--~~~~~--~--~ 214 (334)
..... .+.+++..+++|+++. .|..+|.+.+ .+.+...+.... .....+ +..+. + +
T Consensus 687 ~~pg~-----~GADi~~~s~HK~f~~P~G~GGPg~G~l~v-r~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a 760 (954)
T PRK05367 687 ARPGD-----IGADVSHLNLHKTFCIPHGGGGPGVGPIGV-KAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPIS 760 (954)
T ss_pred CChhh-----cCCCEEEecCcccCCCCcCCCCCceEEEee-cccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHH
Confidence 11111 5677888999999852 2445788887 444443332111 001111 11111 1 1
Q ss_pred HHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCceeE--EeeecCCcCCCCChhhHHHHHHHHHHhcCe
Q 019899 215 ISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSESSAGLY--CWADMSGLIPSYSEKGELELWDKLLNIAKI 291 (334)
Q Consensus 215 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi 291 (334)
..++.. +..+.+.+..++.-.+++++.++|++. .+.+..+.+.++ +.++++.... .......++.++| .++|+
T Consensus 761 ~~yi~~--~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~~~~~~e~i~~~~~~~~-~~g~~~~di~krL-~d~G~ 836 (954)
T PRK05367 761 WMYIRM--MGAEGLRQATEVAILNANYIAKRLKDHYPVLYTGANGRVAHECILDLRPLKE-STGITVDDIAKRL-IDYGF 836 (954)
T ss_pred HHHHHH--HCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCcccceEEEeecccc-cCCCCHHHHHHHH-HHCCC
Confidence 112111 113445566666668899999999774 333333222111 2344432211 1112346788885 56899
Q ss_pred EEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 292 NVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 292 ~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
.... ..|. .++.+|++++. .+++|+++++++|..+.++
T Consensus 837 ~~~t-~~~p--v~~~l~i~ptE~~s~~elDr~~~al~~i~~e 875 (954)
T PRK05367 837 HAPT-MSFP--VAGTLMVEPTESESKAELDRFCDAMIAIRAE 875 (954)
T ss_pred eEee-cCCc--cCCEEEEEeeecCCHHHHHHHHHHHHHHHHH
Confidence 8643 2232 36789999885 5899999999999888764
No 339
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.71 E-value=2.2e-15 Score=141.11 Aligned_cols=294 Identities=11% Similarity=0.060 Sum_probs=171.4
Q ss_pred CcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCc----ccc-----HHHHHHHH
Q 019899 18 SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNF----AFS-----ITALDQAF 88 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~----~~~-----~~~l~~~l 88 (334)
..-++++|+|.++.+++.+++.+||+||++..||.+...++. +.|+.+++++... +.+ .++ .+.++++|
T Consensus 212 ~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLi-lsga~PVYl~P~r-n~~Gi~g~I~~~~~~~e~i~~~i 289 (714)
T PRK15400 212 RSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMM-MSDVTPIYFRPTR-NAYGILGGIPQSEFQHATIAKRV 289 (714)
T ss_pred cEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHH-HcCCeEEEecccc-cccCCccCCCccccCHHHHHHHH
Confidence 468899999999999999999999999999999999999988 9999999987543 233 234 78899888
Q ss_pred HHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccc-cCCCCcchhhhhhhccccCCCcEE
Q 019899 89 NQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSI-FGNEEFVSMAEILEAEEVDKDRVH 167 (334)
Q Consensus 89 ~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 167 (334)
++.... +++.++++++|+. .|.+++ ++.|.+.|+.++ +++||||+... |. +.+.+..++..- ..+.+.++
T Consensus 290 ~~~p~a-k~p~~~vit~pTY-dG~~yd---~~~I~~~~~~~~--ilvDEAwgah~~F~-p~~~~~sam~~g-a~~~~~i~ 360 (714)
T PRK15400 290 KETPNA-TWPVHAVITNSTY-DGLLYN---TDFIKKTLDVKS--IHFDSAWVPYTNFS-PIYEGKCGMSGG-RVEGKVIY 360 (714)
T ss_pred HhCccc-cCccEEEEECCCC-ccEecC---HHHHHHHhCCCC--EEEEccchhhhccC-cccCCcChhhcC-CCCCCceE
Confidence 764211 2344799999954 799999 888888888777 68999998743 32 122212222110 00124558
Q ss_pred EEecccccCCCCCceEEEEeecCHHH-HHHHHHhhcccCCChHHHHHHHHhhCChHHHHH-HHHHHHHHHHHHHHHHHHH
Q 019899 168 IIYGLSKDLSLPGFRTGVIYSYNESV-LAAAKKLTRFCSISAPTQRLLISMLSDTKFIQE-YLETNKRRIKKLYDSFVAG 245 (334)
Q Consensus 168 ~~~s~sK~~~~~g~r~g~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 245 (334)
++.|.||.+ +++..+..+.-+..+ .+++...-..+..++++-..++.+-....+++. .-.+..+...+....+++.
T Consensus 361 vtQStHKtL--~alTQaS~LHvkg~vd~~~~n~a~~m~~STSPsY~l~ASLD~a~~~m~~~~G~~l~~~~i~~a~~~R~~ 438 (714)
T PRK15400 361 ETQSTHKLL--AAFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKE 438 (714)
T ss_pred EEEchhhcc--cchhHHhHHHHcCCCCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 889999998 455455433211111 233333222222222222222222111112221 2234444555555666666
Q ss_pred HHhC-C------CcccCCC-----------------------------ceeEEeeecCCcC-CC---CChhhHHHHHHHH
Q 019899 246 LKQL-G------IRCSESS-----------------------------AGLYCWADMSGLI-PS---YSEKGELELWDKL 285 (334)
Q Consensus 246 l~~~-g------~~~~~~~-----------------------------~g~~~~~~~~~~~-~~---~~~~~~~~~~~~l 285 (334)
+.+. + |.+..++ ...=+.+..|+.. ++ ..+..+..+.+.
T Consensus 439 l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~Klti~tpgi~~~g~~~~~Gipg~~v~~~- 517 (714)
T PRK15400 439 IKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKDGTMSDFGIPASIVAKY- 517 (714)
T ss_pred HHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccccCCceEEEEeCCCCCCccccccCCCHHHHHHH-
Confidence 6554 2 3322211 0011222232210 00 012234455566
Q ss_pred HHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHH
Q 019899 286 LNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAE 331 (334)
Q Consensus 286 l~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~ 331 (334)
|+++||.+.-.. ..++-+-++. .++++++.+++.|.++-+
T Consensus 518 L~e~gI~~E~~d------~~~iLfl~s~g~t~~~~~~L~~aL~~f~~ 558 (714)
T PRK15400 518 LDEHGIVVEKTG------PYNLLFLFSIGIDKTKALSLLRALTDFKR 558 (714)
T ss_pred HHHcCCEEEecC------CCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 677899876422 2344444442 788999999999987633
No 340
>PRK07036 hypothetical protein; Provisional
Probab=99.71 E-value=1.1e-14 Score=133.49 Aligned_cols=295 Identities=14% Similarity=0.091 Sum_probs=174.8
Q ss_pred CCCCCCcEEEecCcHHHHHHHHHHhc------C--CCCeEEecCCCCCChhhhhhhccCc------------EEEEEeCC
Q 019899 13 VSFDPSQIVLTAGATPAVEILCFCLA------D--HGNALLVPSPYYPGFDRDIRFRTGV------------ELIPVHCR 72 (334)
Q Consensus 13 ~~~~~~~i~~~~g~~~~~~~~~~~l~------~--~gd~vl~~~p~~~~~~~~~~~~~g~------------~v~~v~~~ 72 (334)
.+.+.+.+++++++++|+..++.... . ...+|+....+|.+......-..|. .+..++.+
T Consensus 108 ~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p 187 (466)
T PRK07036 108 APGDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSP 187 (466)
T ss_pred CCCCcCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCC
Confidence 33335689999999999999887642 1 1367888888887654322101111 13333332
Q ss_pred CCC--Ccccc--------HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEEEEeccccc
Q 019899 73 STD--NFAFS--------ITALDQAFNQARKRGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHVISDEIYGG 141 (334)
Q Consensus 73 ~~~--~~~~~--------~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~ 141 (334)
... ....+ ++.+++.+.. ....++.+|++...+...|.+. +.+.++++.++|++||+++|+||++.+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tG 265 (466)
T PRK07036 188 NPYRRPAGMSEAAFCDFLVDEFEDKILS--LGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTG 265 (466)
T ss_pred cccccccCCChHHHHHHHHHHHHHHHHH--cCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhC
Confidence 110 11111 2334444432 1224567666665577778765 566799999999999999999999987
Q ss_pred cccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHHh---------hcccCCChHHH
Q 019899 142 SIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKKL---------TRFCSISAPTQ 211 (334)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~~---------~~~~~~~~~~~ 211 (334)
|...|..+ ...... +..+| +.+++|.++ .| +++|.+++ ++++.+.+... ..+++.+++..
T Consensus 266 fGRtG~~~-~~~~~~---gv~PD----ivt~gK~l~-gG~~Pi~av~~-~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~ 335 (466)
T PRK07036 266 FGRLGHFF-ASEAVF---GIQPD----IITFAKGLT-SGYQPLGAVII-SERLLDVISGPNAKGNVFTHGFTYSGHPVAC 335 (466)
T ss_pred CCcCchhh-hhhhhc---CCCCC----EEEEccccc-cCccccEEEEE-cHHHHHHHhcccCcCcccccCCCCCCCHHHH
Confidence 65444321 111010 11122 346899998 78 58999998 88888877531 22456788888
Q ss_pred HHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CCcccCCCceeEEeeecCCcCCCC-----ChhhHHHHHH
Q 019899 212 RLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL---GIRCSESSAGLYCWADMSGLIPSY-----SEKGELELWD 283 (334)
Q Consensus 212 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---g~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~~~~~ 283 (334)
.++.+.++..+ + ....++++++-+++.+.|+++ ++......-|.++.+++....... .......+..
T Consensus 336 aaa~a~Le~i~---~--~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~ 410 (466)
T PRK07036 336 AAALKNIEIME---R--EGLCEHVREVGPYFEERLASLRELPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDR 410 (466)
T ss_pred HHHHHHHHHHH---h--CCHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeceEEEEEEccCccccCCCCchhHHHHHHHH
Confidence 77777765322 1 234445555556666666543 221111223556667664321110 0112234566
Q ss_pred HHHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 284 KLLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 284 ~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
. +.++||.+.|.. +.+|++... ++++|++++++++.+++++
T Consensus 411 ~-~~~~Gvl~~~~~-------~~~~l~Ppl~it~~~id~~~~~l~~al~~ 452 (466)
T PRK07036 411 H-CQERGLLVRPLE-------HLCVLSPPLIITRAQIDEIVAILRAAIEE 452 (466)
T ss_pred H-HHHCCcEEeecC-------CEEEEeCCCcCCHHHHHHHHHHHHHHHHH
Confidence 6 445899987631 357888663 5999999999999888865
No 341
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.71 E-value=1.5e-14 Score=132.53 Aligned_cols=290 Identities=14% Similarity=0.078 Sum_probs=176.3
Q ss_pred CCCcEEEecCcHHHHHHHHHHhc--------CCCCeEEecCCCCCChhhhhhhccCc------------EEEEEeCCCCC
Q 019899 16 DPSQIVLTAGATPAVEILCFCLA--------DHGNALLVPSPYYPGFDRDIRFRTGV------------ELIPVHCRSTD 75 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l~--------~~gd~vl~~~p~~~~~~~~~~~~~g~------------~v~~v~~~~~~ 75 (334)
..+.+++++++++|+..++.... ....+|+....+|.+.........|. .+..+|.++..
T Consensus 106 ~~~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~ 185 (466)
T PRK07030 106 GLSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCY 185 (466)
T ss_pred CcCEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCcc
Confidence 44689999999999999887652 12357888888887654322102221 12333321100
Q ss_pred --Cc--------cccHHHHHHHHHHHHHcCCceeEEEEeC-CCCCcccC-CCHHHHHHHHHHHHhcCcEEEEeccccccc
Q 019899 76 --NF--------AFSITALDQAFNQARKRGVKVRGILICN-PANPVGNI-IPRETLYELLDFAREKNIHVISDEIYGGSI 143 (334)
Q Consensus 76 --~~--------~~~~~~l~~~l~~~~~~~~~~~~i~~~~-p~nptG~~-~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~ 143 (334)
.. .-+++.+++.++. .+.++.+|++.. .+...|.+ .+.+.++++.++|++||+++|.||++.+|.
T Consensus 186 ~~~~~~~~~~~~~~~l~~le~~~~~---~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfG 262 (466)
T PRK07030 186 LRPEGMSWEEHSRRMFAHMEQTLAE---HHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFG 262 (466)
T ss_pred ccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcC
Confidence 00 1134556666653 234667666664 25666774 456779999999999999999999998875
Q ss_pred cCCCCcchhhhhhhccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHH---------hhcccCCChHHHHH
Q 019899 144 FGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKK---------LTRFCSISAPTQRL 213 (334)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~---------~~~~~~~~~~~~~~ 213 (334)
..|..+.. .. .+..--+.+++|.++ .| +++|.++. ++++.+.+.. +..+++.|+....+
T Consensus 263 RtG~~~a~-~~--------~gv~PDiv~~gKgl~-gG~~Pi~av~~-~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aa 331 (466)
T PRK07030 263 RTGTMFAC-EQ--------AGIRPDFLCLSKALT-GGYLPLAAVLT-TDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAA 331 (466)
T ss_pred ccccchHH-Hh--------cCCCCCEEeeehhcc-CCcccceEEEe-cHHHHHHHhcccccccccccCCCCCCCHHHHHH
Confidence 55542221 11 111112335789998 88 59999998 8888877742 23456678888887
Q ss_pred HHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CCcccCCCceeEEeeecCCcCCCC-----ChhhHHHHHHHH
Q 019899 214 LISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL---GIRCSESSAGLYCWADMSGLIPSY-----SEKGELELWDKL 285 (334)
Q Consensus 214 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---g~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~~~~~~l 285 (334)
+.+.++..+ + +...++.+++-+++.+.|+++ +.-.....-|+++.+++....... .......+...+
T Consensus 332 a~a~L~~i~--~---~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~ 406 (466)
T PRK07030 332 ALATLDIFE--Q---DNVIENNRALARRMAEATAHLADHPHVAEVRQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHA 406 (466)
T ss_pred HHHHHHHHH--h---cCHHHHHHHHHHHHHHHHHHHhcCCCEEEeEeceeEEEEEeccCccccccCcchhHHHHHHHHHH
Confidence 777765432 1 223445555566666666553 211111223566666664321110 001123566664
Q ss_pred HHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 286 LNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 286 l~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
+ ++|+.+.+. .+.+|+..+. ++++|++.+++++.+++++
T Consensus 407 ~-~~Gvl~~~~-------g~~i~~~Ppl~it~~eid~~~~~l~~al~~ 446 (466)
T PRK07030 407 L-ERGALLRPL-------GSVVYFLPPYVITPEQIDFLAEVASEGIDI 446 (466)
T ss_pred H-HCCeEEEec-------CCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 4 589998752 1468887664 6999999999999999876
No 342
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.71 E-value=1.8e-14 Score=131.93 Aligned_cols=300 Identities=13% Similarity=0.117 Sum_probs=179.6
Q ss_pred hhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcC-------C-CCeEEecCCCCCChhhhhhhccCc------------EE
Q 019899 7 QVLGQAVSFDPSQIVLTAGATPAVEILCFCLAD-------H-GNALLVPSPYYPGFDRDIRFRTGV------------EL 66 (334)
Q Consensus 7 ~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~-------~-gd~vl~~~p~~~~~~~~~~~~~g~------------~v 66 (334)
+++...++...+.+++++++++|+..++..... + ..+|+....+|.+......-..|. .+
T Consensus 106 e~L~~~~p~~~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~ 185 (460)
T PRK06916 106 EKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEA 185 (460)
T ss_pred HHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCC
Confidence 334333433346899999999999998875431 2 367888888887754322202221 12
Q ss_pred EEEeCCCCCC--cc--------ccHHHHHHHHHHHHHcCCceeEEEEeC-CCCCcccC-CCHHHHHHHHHHHHhcCcEEE
Q 019899 67 IPVHCRSTDN--FA--------FSITALDQAFNQARKRGVKVRGILICN-PANPVGNI-IPRETLYELLDFAREKNIHVI 134 (334)
Q Consensus 67 ~~v~~~~~~~--~~--------~~~~~l~~~l~~~~~~~~~~~~i~~~~-p~nptG~~-~~~~~l~~i~~~~~~~~~~vi 134 (334)
..+|.++... +. -+++.+++.++. ++.++.+|++.. .+...|.+ .|.+.++++.++|++||+++|
T Consensus 186 ~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI 262 (460)
T PRK06916 186 IKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKE---KHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFI 262 (460)
T ss_pred EEeCCCcccccccCCChHHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEE
Confidence 3333211000 00 134556666652 234677677665 36667876 477789999999999999999
Q ss_pred EeccccccccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHH---------hhccc
Q 019899 135 SDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKK---------LTRFC 204 (334)
Q Consensus 135 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~---------~~~~~ 204 (334)
.||++.++...|..+. .... +..+| +.+++|.++ .| +++|.+++ ++++.+.+.. +...+
T Consensus 263 ~DEV~TG~GRtG~~~a-~~~~----gv~PD----iv~~gK~l~-gG~~Pi~av~~-~~ei~~~~~~~~~~~~~~~~~~T~ 331 (460)
T PRK06916 263 TDEVATGFGRTGKMFA-CEHE----NVTPD----IMTAGKGLT-GGYLPIAITVT-TDEIYNAFYGDYEEQKTFFHGHSY 331 (460)
T ss_pred eechhhCCCcCchhhH-HHhc----CCCCC----eeeeehhhh-cCccccceeee-cHHHHHHhhccccccCccccCCCC
Confidence 9999987644443221 1111 11122 336899998 78 59999998 7888877642 22345
Q ss_pred CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCccc--CCCceeEEeeecCCcCCCC----Ch-h
Q 019899 205 SISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCS--ESSAGLYCWADMSGLIPSY----SE-K 276 (334)
Q Consensus 205 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~--~~~~g~~~~~~~~~~~~~~----~~-~ 276 (334)
+.++....++.+.++..+ + ....++++++-+++.+.|+++ ..... ...-|.+..+++....... .. .
T Consensus 332 ~gnpl~~aaa~a~l~~l~---~--~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~ 406 (460)
T PRK06916 332 TGNPLGCAVALANLELYE---K--TNLIEQVARKTEYVATQLEDLFALKHVGDIRQLGLMVGIELVKNKETKEPFEWTER 406 (460)
T ss_pred CCCHHHHHHHHHHHHHHH---h--ccHHHHHHHHHHHHHHHHHHhhcCCCeEEeecCCceeeEEeecccccccCCCchhh
Confidence 678888777777764322 1 223455566666666666654 11111 1122445555554321110 00 1
Q ss_pred hHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 277 GELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 277 ~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
....+...+ .++||.+.|.. +.+|+..+. ++++|++++++++.+++++.
T Consensus 407 ~~~~i~~~~-~~~Gvl~~~~g-------~~l~~~Ppl~it~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06916 407 VGVQVCKRS-RELGMLTRPLG-------NTIVFMPPLASTIDELDEMLRILYKAISDV 456 (460)
T ss_pred HHHHHHHHH-HHCCeEEEecC-------CEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 123566664 45899997631 468887653 69999999999999998763
No 343
>PRK07483 hypothetical protein; Provisional
Probab=99.71 E-value=1.8e-14 Score=131.33 Aligned_cols=297 Identities=12% Similarity=0.084 Sum_probs=173.6
Q ss_pred CCCcEEEecCcHHHHHHHHHHhc--------CCCCeEEecCCCCCChhhhhhhccCc------------EEEEEeCCCCC
Q 019899 16 DPSQIVLTAGATPAVEILCFCLA--------DHGNALLVPSPYYPGFDRDIRFRTGV------------ELIPVHCRSTD 75 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l~--------~~gd~vl~~~p~~~~~~~~~~~~~g~------------~v~~v~~~~~~ 75 (334)
..+.+++++++++|+..++.... ....+|+....+|.+......-..|. .+..++..+..
T Consensus 89 ~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~ 168 (443)
T PRK07483 89 GLEHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAY 168 (443)
T ss_pred CCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccc
Confidence 34689999999999998877542 12356888777777654321102111 11223221100
Q ss_pred Ccc---c--------cHHHHHHHHHHHHHcCCceeEEEEeCCCC-CcccC-CCHHHHHHHHHHHHhcCcEEEEecccccc
Q 019899 76 NFA---F--------SITALDQAFNQARKRGVKVRGILICNPAN-PVGNI-IPRETLYELLDFAREKNIHVISDEIYGGS 142 (334)
Q Consensus 76 ~~~---~--------~~~~l~~~l~~~~~~~~~~~~i~~~~p~n-ptG~~-~~~~~l~~i~~~~~~~~~~vi~D~~~~~~ 142 (334)
... . .++++++++.. ....++.+|++...+. ..|.+ .+.+.++.+.++|++||+++|.||++.+|
T Consensus 169 ~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGf 246 (443)
T PRK07483 169 REQRAGESDEAYGQRLADELEAKILE--LGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGM 246 (443)
T ss_pred cccccCCCHHHHHHHHHHHHHHHHHh--cCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCc
Confidence 000 0 12445554432 1123566566553353 34654 46778999999999999999999999877
Q ss_pred ccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCCc-eEEEEeecCHHHHHHHHH------hhcccCCChHHHHHHH
Q 019899 143 IFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGF-RTGVIYSYNESVLAAAKK------LTRFCSISAPTQRLLI 215 (334)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~-r~g~i~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 215 (334)
...|..+. .... +..+| +.+++|.++ .|+ ++|.+++ ++++.+.+.. +..+++.|++...++.
T Consensus 247 GRtG~~~a-~~~~----gv~PD----iv~~gK~l~-gG~~Pi~av~~-~~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~ 315 (443)
T PRK07483 247 GRTGTLFA-CEED----GVAPD----LVTIAKGLG-AGYQPIGAVLA-SDRIYDAIADGSGFFQHGHTYLGHATACAAAL 315 (443)
T ss_pred ccCcHHHH-Hhhc----CCCCC----eeeehhhhc-cCccccEEEEE-cHHHHHHHhcCCCccccCCCCCCCHHHHHHHH
Confidence 54443221 1111 11122 345799998 885 9999998 8888887753 2345678888888777
Q ss_pred HhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHh----CCCcccCCCceeEEeeecCCcCCCC-----ChhhHHHHHHHHH
Q 019899 216 SMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQ----LGIRCSESSAGLYCWADMSGLIPSY-----SEKGELELWDKLL 286 (334)
Q Consensus 216 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~g~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~~~~~~ll 286 (334)
+.++..+ + ....++.+++-+++.+.|++ +++......-|.++.+++....... .......+...++
T Consensus 316 a~l~~i~--~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (443)
T PRK07483 316 AVQRVIA--E---DGLLANVRARGEQLRARLRERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPALKLHARIKREAM 390 (443)
T ss_pred HHHHHHH--h---cCHHHHHHHHHHHHHHHHHHHHhcCCCeeeEeecccEEEEEEeecccccCCCCchhhHHHHHHHHHH
Confidence 7775432 1 22344455555666666654 2321111223555556653321100 0112235666645
Q ss_pred HhcCeEEcCCCCc--CCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 287 NIAKINVTPGSAC--HCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 287 ~~~gi~v~~g~~~--~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
+ +|+.+.+.... +. .++.+|+...- ++++++++++++|.+++++
T Consensus 391 ~-~Gll~~~~~~~~~~~-~~~~l~~~PpL~it~~eid~~~~~l~~~l~~ 437 (443)
T PRK07483 391 A-RGLMVYPMGGTIDGV-RGDHVLLAPPFIITAAQIDEIVERLGDAIDA 437 (443)
T ss_pred H-CCcEEEecCccccCC-CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 4 89999764211 11 13679998764 6999999999999999875
No 344
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.70 E-value=5.2e-15 Score=131.05 Aligned_cols=264 Identities=14% Similarity=0.097 Sum_probs=168.0
Q ss_pred CCcEEEecCcHHHHHHHHHHhc-CCC-CeEEecCCCCCChhhhhhhccCc------------EEEEEeCCCCCCccccHH
Q 019899 17 PSQIVLTAGATPAVEILCFCLA-DHG-NALLVPSPYYPGFDRDIRFRTGV------------ELIPVHCRSTDNFAFSIT 82 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~-~~g-d~vl~~~p~~~~~~~~~~~~~g~------------~v~~v~~~~~~~~~~~~~ 82 (334)
.+.+++++++++|+..++.... .+| ++|+....+|.+.........+. .+..+|. .|.+
T Consensus 81 ~~~v~~~~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~-------~d~~ 153 (364)
T PRK04013 81 YEYVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPF-------NDVE 153 (364)
T ss_pred CCEEEEeCchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecC-------CCHH
Confidence 4689999999999999988762 234 78999988888754332201111 1222222 2577
Q ss_pred HHHHHHHHHHHcCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 83 ALDQAFNQARKRGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 83 ~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
.+++.+.+ ++.+|++...+...|... |.+.++++.++|++||+++|+||++.++ ..|..+ ..... +.
T Consensus 154 ~l~~~i~~------~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~-a~~~~----gv 221 (364)
T PRK04013 154 AAKEAITK------ETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFL-AIEHY----KV 221 (364)
T ss_pred HHHHHhcC------CcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCchh-HHHhc----CC
Confidence 88887764 778777775566666644 6678999999999999999999999876 444322 11111 11
Q ss_pred CCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDS 241 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 241 (334)
.++ +.+++|.++ .|+++|.++. ++++.. ..+..+++.|+.+..++.+.++..+ ++. +.++.++.
T Consensus 222 ~PD----iv~~gK~lg-gG~P~~a~~~-~~~~~~--~~~~~T~~gnp~~~aaa~a~l~~i~--~~~---l~~~~~~~--- 285 (364)
T PRK04013 222 EPD----IVTMGKGIG-NGVPVSLTLT-NFDVER--GKHGSTFGGNPLACKAVAVTLRILR--RER---LVEKAGEK--- 285 (364)
T ss_pred CCC----EEEeccccc-CCceeEEEEe-cccccC--CCcCCCCCcCHHHHHHHHHHHHHHH--hcc---HHHHHHHH---
Confidence 122 345799998 7899999998 545421 1244566788888888877775432 111 11122111
Q ss_pred HHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHH
Q 019899 242 FVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIP 320 (334)
Q Consensus 242 ~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~ 320 (334)
+ +.+..-.+.-+. .-|.++.+++..+ ...+...++ ++|+.+.+.. .+.+|+..+- +++++++
T Consensus 286 l-~~l~~~~v~~vR-G~Gl~~gve~~~~--------~~~i~~~~~-~~Gll~~~~g------~~vlr~~Ppl~it~~~i~ 348 (364)
T PRK04013 286 F-IEIKGERVVTTR-GRGLMIGIVLKKP--------VGKYVEELQ-NRGYLVHTAG------QRVIRLLPPLIISKDTME 348 (364)
T ss_pred H-HHhccCcceeee-eCcEEEEEEeCCc--------HHHHHHHHH-hCCcEEeeCC------CCEEEEeCCcccCHHHHH
Confidence 1 222211111112 2366666777532 245667744 4899986532 3679998774 6999999
Q ss_pred HHHHHHHHHHHH
Q 019899 321 LVIERIQKVAET 332 (334)
Q Consensus 321 ~~l~~l~~~~~~ 332 (334)
+++++|.+++++
T Consensus 349 ~~~~~l~~~l~~ 360 (364)
T PRK04013 349 EAKSAIEGVIND 360 (364)
T ss_pred HHHHHHHHHHHH
Confidence 999999999875
No 345
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.70 E-value=2.5e-17 Score=140.79 Aligned_cols=225 Identities=18% Similarity=0.217 Sum_probs=145.7
Q ss_pred CCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhh--hhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 17 PSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRD--IRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~--~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
.+..+++.++|.++.+++.+++++++.|++..++|....+. .....|.+++.++. ++...+++++|++.++....+
T Consensus 44 ~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~aHi~~~E~ga~~~~~G~~~~~l~~--~~~G~l~~~~l~~~~~~~~~h 121 (290)
T PF01212_consen 44 KEAALFVPSGTMANQLALRAHLRPGESVICADTAHIHFDETGAIEELSGAKLIPLPS--DDDGKLTPEDLEAAIEEHGAH 121 (290)
T ss_dssp SSEEEEESSHHHHHHHHHHHHHHTTEEEEEETTEHHHHSSTTHHHHHTTCEEEEEBE--CTGTBB-HHHHHHHHHHHTGT
T ss_pred CCEEEEeCCCChHHHHHHHHHHhcCCceeccccceeeeeccchhhHhcCcEEEECCC--cccCCCCHHHHHHHhhhcccc
Confidence 45667999999999999999999999999999987644442 22258999999995 232689999999999987555
Q ss_pred CCceeEEEEeCCCCC-cccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEeccc
Q 019899 95 GVKVRGILICNPANP-VGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLS 173 (334)
Q Consensus 95 ~~~~~~i~~~~p~np-tG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s 173 (334)
..++++|.+++|+|. .|++++.+++++|.++|++||++|+.|.+=-.... .....++.++. ...+.+..|++
T Consensus 122 ~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~-~~~~~~~~e~~------~~~D~v~~~~t 194 (290)
T PF01212_consen 122 HPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGARLANAA-AALGVSLAEIA------AGADSVSFGGT 194 (290)
T ss_dssp SGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHH-CHHHHHHHHHH------TTSSEEEEETT
T ss_pred CCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhh-hcccccHHHHh------hhCCEEEEEEE
Confidence 568999999999874 59999999999999999999999999987110000 00112344443 34556666999
Q ss_pred ccCCCCCceEEEEeecCHHHHHHHHHhhcccC----CChHHHH---HHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019899 174 KDLSLPGFRTGVIYSYNESVLAAAKKLTRFCS----ISAPTQR---LLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGL 246 (334)
Q Consensus 174 K~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~----~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 246 (334)
|.+++++ |.+++.++++++.........+ ....... .....+... +.+ ..+..+-.++.+.+.+.|
T Consensus 195 K~~g~~~---Gavl~~~~~~i~~~~~~~k~~gg~~~~~G~~~a~~~~~~~~l~~l---~~~-~~~~~~~~~~A~~La~~l 267 (290)
T PF01212_consen 195 KNGGAPG---GAVLAGNKEFIAKARRQRKRLGGGMRQAGVLAAAELYQFAALRAL---ELW-LERARHANAMAKRLAAGL 267 (290)
T ss_dssp STT-SSS---EEEEEESHHHHHHHHHHHHHHTHHHHHTTHHHHHHHHHHHHHCHE---ECS-HHHHHCHHHHHHCHHHCH
T ss_pred ccccccc---ceEEEechHHHHHHHHHHHHhccCeeecceeeeechhhHHHHHHH---Hhh-HHHHHHHHHHHHHHHHHH
Confidence 9998765 5555448886555544332221 1111111 000111111 111 234455667788888899
Q ss_pred HhCCCcccCCC
Q 019899 247 KQLGIRCSESS 257 (334)
Q Consensus 247 ~~~g~~~~~~~ 257 (334)
+..+..+..+.
T Consensus 268 ~~~~~~~~~~~ 278 (290)
T PF01212_consen 268 EALGGVLPRPV 278 (290)
T ss_dssp HEECEEEETTS
T ss_pred HHCCCcccCCC
Confidence 88777655444
No 346
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.70 E-value=1.6e-14 Score=127.19 Aligned_cols=302 Identities=17% Similarity=0.214 Sum_probs=195.7
Q ss_pred CCcEEEecCcHHHHHHHHHHhcC-CCCeEEecCC-----CCCCh---hhhhhhccCcEEEEEeCC--------CCCCccc
Q 019899 17 PSQIVLTAGATPAVEILCFCLAD-HGNALLVPSP-----YYPGF---DRDIRFRTGVELIPVHCR--------STDNFAF 79 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~~-~gd~vl~~~p-----~~~~~---~~~~~~~~g~~v~~v~~~--------~~~~~~~ 79 (334)
.+.+++|..++.+..+++..+++ +||.+.+..+ ....+ ..... ..|..++.++.+ .+....+
T Consensus 89 ~E~alpthqGRgaE~Il~~~~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~-l~G~~~~~l~~~ea~~~~~~~~fkG~~ 167 (467)
T TIGR02617 89 YQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQ-INGCTARNVYTKEAFDTGVRYDFKGNF 167 (467)
T ss_pred CceEEECCCCchHHHHHHHhhcccccccccccccccccceEEEEecchHHHH-HcCceeecccchhhcccccCCCCCCCc
Confidence 45688999999999999999988 7887775543 21112 22344 678887776432 2334579
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCC-CcccCCCHHHHHHHHHHHHhcCcEEEEeccc-ccccc------CCCCcch
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPAN-PVGNIIPRETLYELLDFAREKNIHVISDEIY-GGSIF------GNEEFVS 151 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~n-ptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~-~~~~~------~~~~~~~ 151 (334)
|++.++++|++... .++..+...-.+| -.|+++|.+.++++.++|++||+.++.|.+= ....+ .+..-.+
T Consensus 168 dl~~le~~I~~~g~--~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~s 245 (467)
T TIGR02617 168 DLEGLERGIEEVGP--NNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWS 245 (467)
T ss_pred CHHHHHHHHhhcCC--CCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCC
Confidence 99999999986411 1222222222233 5799999999999999999999999999861 11011 0112234
Q ss_pred hhhhhhccccCCCcEEEEecccccCCCC-CceEEEEeecCH---HHHHHHHH-------hhcccCCChHHHHHHHHhhCC
Q 019899 152 MAEILEAEEVDKDRVHIIYGLSKDLSLP-GFRTGVIYSYNE---SVLAAAKK-------LTRFCSISAPTQRLLISMLSD 220 (334)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~s~sK~~~~~-g~r~g~i~~~~~---~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~ 220 (334)
+.++..+ +-...+.+..|+||.++.| | |++..+++ ++.+.++. +.++++.+..-+.+++.-|.+
T Consensus 246 i~eI~rE--~~~~aDsvt~slsKglgApvG---g~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e 320 (467)
T TIGR02617 246 IEQITRE--TYKYADMLAMSAKKDAMVPMG---GLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYD 320 (467)
T ss_pred HHHHHHH--hhccCCEEEEEcCCCCCCccc---ceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhh
Confidence 4444321 1123344556899999866 3 56666666 44444433 234456777777777766655
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCC--CCChhhHHHHHHHHHHhcCeEEc-CCC
Q 019899 221 TKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIP--SYSEKGELELWDKLLNIAKINVT-PGS 297 (334)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~gi~v~-~g~ 297 (334)
.- -++++..+..+ .++|.+.|.+.|+.++. .+|.-++++..+... ......+..++.+|..+.||... -|+
T Consensus 321 ~~-~~~yl~~ri~q----v~yl~~~L~~~Gvpi~~-~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~ 394 (467)
T TIGR02617 321 GM-NLDWLAYRINQ----VQYLVNGLEEIGVVCQQ-AGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGS 394 (467)
T ss_pred cc-cHHHHHHHHHH----HHHHHHHHHhCCCcEEe-cCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecc
Confidence 31 24455544444 47899999999999988 889888887554322 12345667899999999999633 344
Q ss_pred Cc-CCC----C-----CCeEEEEecC--CCcccHHHHHHHHHHHHHH
Q 019899 298 AC-HCI----E-----PGWFRCCFTS--LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 298 ~~-~~~----~-----~~~iRi~~~~--~~~~~l~~~l~~l~~~~~~ 332 (334)
.. +-. . -.-+|+.+.. .|.+.++.+.+++..+.++
T Consensus 395 ~~~~rd~~~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~ 441 (467)
T TIGR02617 395 LLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_pred eecccCCCCCccCCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 31 111 0 1468999985 4999999999999988765
No 347
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.70 E-value=1.4e-14 Score=135.86 Aligned_cols=293 Identities=10% Similarity=0.053 Sum_probs=169.1
Q ss_pred CcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcc----ccH-----HHHHHHH
Q 019899 18 SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFA----FSI-----TALDQAF 88 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~----~~~-----~~l~~~l 88 (334)
..-+++||+|.++.+++.+++.+||+||++..||.+...++. +.|+.+++++... +.++ ++. +.+++++
T Consensus 212 ~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLi-lsga~PVYl~P~~-n~~Gi~g~I~~~~~~~e~I~~~i 289 (713)
T PRK15399 212 QSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLM-MSDVVPIWLKPTR-NALGILGGIPRREFTRDSIEEKV 289 (713)
T ss_pred cEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHH-HcCCeeEEecccc-cccCCcCCCChhhccHHHHHHHH
Confidence 568899999999999999999999999999999999999988 9999999987532 2332 344 8888888
Q ss_pred HHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEE-EEeccccccc-cCCCCcchhhhhhhccccCCCcE
Q 019899 89 NQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHV-ISDEIYGGSI-FGNEEFVSMAEILEAEEVDKDRV 166 (334)
Q Consensus 89 ~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~v-i~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 166 (334)
++.... ++++++++++|+. .|.+++ +++|.+.| |+.+ ++||||+... |. +.+.+...+... .-....+
T Consensus 290 ~~~p~~-~~p~~vvit~pTY-dGi~yd---~~~I~~~~---g~~~ilvDEAhgah~~F~-p~~~~~sam~~~-~~aD~~i 359 (713)
T PRK15399 290 AATTQA-QWPVHAVITNSTY-DGLLYN---TDWIKQTL---DVPSIHFDSAWVPYTHFH-PIYQGKSGMSGE-RVPGKVI 359 (713)
T ss_pred HhCCCc-CCceEEEEECCCC-CceeeC---HHHHHHHh---CCCEEEEeccchhhhhcC-cccCCcChhhCC-CCCCeee
Confidence 764211 2457899999954 799999 77777777 5666 6999998743 21 112222222110 0002334
Q ss_pred EEEecccccCCCCCceEEEEeecCHHH-HHHHHHhhcccCCChHHHHHHHHhhCChHHHHH-HHHHHHHHHHHHHHHHHH
Q 019899 167 HIIYGLSKDLSLPGFRTGVIYSYNESV-LAAAKKLTRFCSISAPTQRLLISMLSDTKFIQE-YLETNKRRIKKLYDSFVA 244 (334)
Q Consensus 167 ~~~~s~sK~~~~~g~r~g~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~ 244 (334)
+++.|.||.+ +++..+..+.-+..+ .+++...-..+..++++-..++.+-.....++. .-.+..+...+....+++
T Consensus 360 ~~tQStHKtL--~alTQaS~iHvk~~vd~~~~n~a~~m~~STSPsY~LmASLD~a~~~m~~~~G~~l~~~~i~~a~~fR~ 437 (713)
T PRK15399 360 FETQSTHKML--AAFSQASLIHIKGEYDEETFNEAFMMHTSTSPSYPIVASVETAAAMLRGNPGKRLINRSVERALHFRK 437 (713)
T ss_pred eeeeehhccc--cccchheeeeecCCCCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 5578999998 555555544322222 234433322222222222222222111112221 223444455555556666
Q ss_pred HHHhC-C------CcccCCC-----------------------------ceeEEeeecCCcCCC----CChhhHHHHHHH
Q 019899 245 GLKQL-G------IRCSESS-----------------------------AGLYCWADMSGLIPS----YSEKGELELWDK 284 (334)
Q Consensus 245 ~l~~~-g------~~~~~~~-----------------------------~g~~~~~~~~~~~~~----~~~~~~~~~~~~ 284 (334)
.+.+. + +++..++ ...=+.+..|+.... ..+..+..+.+.
T Consensus 438 ~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~KltI~t~g~~~~g~~~~~Gi~g~~l~~~ 517 (713)
T PRK15399 438 EVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKF 517 (713)
T ss_pred HHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccCCCceEEEEecCcccccccccCCCCHHHHHHH
Confidence 66543 1 2222210 011122222221000 112344556666
Q ss_pred HHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHH
Q 019899 285 LLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAE 331 (334)
Q Consensus 285 ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~ 331 (334)
|+++||.+.-.. ..++-+-++. .++++++.+++.|.++-+
T Consensus 518 -L~e~gI~~E~~d------~~~vL~l~s~g~t~~~~~~L~~aL~~f~~ 558 (713)
T PRK15399 518 -LDERGIVVEKTG------PYNLLFLFSIGIDKTKAMGLLRGLTEFKR 558 (713)
T ss_pred -HHHcCCEEEecC------CCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 677899886433 2344444442 688999999999987743
No 348
>PRK07480 putative aminotransferase; Validated
Probab=99.69 E-value=2.1e-14 Score=131.29 Aligned_cols=294 Identities=13% Similarity=0.096 Sum_probs=170.5
Q ss_pred CCCCCCcEEEecCcHHHHHHHHHHhcC-------C-CCeEEecCCCCCChhh-hhhhccCcE------------EEEEeC
Q 019899 13 VSFDPSQIVLTAGATPAVEILCFCLAD-------H-GNALLVPSPYYPGFDR-DIRFRTGVE------------LIPVHC 71 (334)
Q Consensus 13 ~~~~~~~i~~~~g~~~~~~~~~~~l~~-------~-gd~vl~~~p~~~~~~~-~~~~~~g~~------------v~~v~~ 71 (334)
.+.+.+.+++++++++|+..++..... + ..+|+....+|.+..- .+. ..|.. +..++.
T Consensus 107 ~p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s-~~g~~~~~~~~~~~~~~~~~~~~ 185 (456)
T PRK07480 107 APPGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGAS-LGGMKYMHEQGDLPIPGIVHIDQ 185 (456)
T ss_pred CCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhh-ccCChhhhcccCCCCCCCeecCC
Confidence 333456899999999999998875421 2 3568877777776432 222 22211 112221
Q ss_pred CCCC--Ccccc--------HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEEEEecccc
Q 019899 72 RSTD--NFAFS--------ITALDQAFNQARKRGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHVISDEIYG 140 (334)
Q Consensus 72 ~~~~--~~~~~--------~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~ 140 (334)
+... .+..+ .+.+++.+.. ....++.+|++...+...|.+. +.+.++.+.++|++||+++|+||++.
T Consensus 186 p~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~t 263 (456)
T PRK07480 186 PYWFGEGGDMTPEEFGLAAARQLEAKILE--LGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVIC 263 (456)
T ss_pred CcccccccCCChHHHHHHHHHHHHHHHHh--cCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh
Confidence 1000 00011 2444443322 1123566666654466678865 55679999999999999999999998
Q ss_pred ccccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCCc-eEEEEeecCHHHHHHHHH------hhcccCCChHHHHH
Q 019899 141 GSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGF-RTGVIYSYNESVLAAAKK------LTRFCSISAPTQRL 213 (334)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~-r~g~i~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 213 (334)
+|...|..+.. ... +..+| +.+++|.++ .|. ++|.+++ ++++.+.+.. +..+++.|+++..+
T Consensus 264 GfGRtG~~~a~-~~~----gv~PD----iv~~gK~l~-gG~~Pi~av~~-~~~i~~~~~~~~~~~~~~~T~~gnpl~~Aa 332 (456)
T PRK07480 264 GFGRTGEWFGS-QHF----GIKPD----LMTIAKGLT-SGYIPMGAVGV-GDRVAEVLIEEGGEFNHGFTYSGHPVAAAV 332 (456)
T ss_pred CCCcCcchhhh-hhc----CCCCC----eeeeehhhc-cCCccceEEEE-cHHHHHHHhcCCCCcccCCCCCcCHHHHHH
Confidence 76544432211 111 11122 346899998 784 8999998 7888887731 23456788888888
Q ss_pred HHHhhCChHHHHHHHHHHHHHH-HHHHHHHHHHHHh---CCCcccCCCceeEEeeecCCcCCCCC----h-hhHHHHHHH
Q 019899 214 LISMLSDTKFIQEYLETNKRRI-KKLYDSFVAGLKQ---LGIRCSESSAGLYCWADMSGLIPSYS----E-KGELELWDK 284 (334)
Q Consensus 214 ~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~---~g~~~~~~~~g~~~~~~~~~~~~~~~----~-~~~~~~~~~ 284 (334)
+.+.++..+ + ....++. +++-+++.+.|++ +++......-|++..+++.+...... . .....+...
T Consensus 333 a~a~L~~l~--~---~~l~~~~~~~~g~~l~~~l~~l~~~~~i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~ 407 (456)
T PRK07480 333 ALANLRILR--D---EGIVERVRDDTGPYLQKRLRELADHPLVGEVRGVGLVGAIELVKDKATRERFEAGGGVGTICRDH 407 (456)
T ss_pred HHHHHHHHH--h---CCHHHHHHHHHHHHHHHHHHHhhcCCCeeeEEeecceEEEEEeccccccccCcchhhHHHHHHHH
Confidence 888875432 1 1222333 2344444455544 33211112235555566632211100 0 011234455
Q ss_pred HHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 285 LLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 285 ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
+.++||.+.+. .+.+|++... ++++|++++++++.+++++.
T Consensus 408 -~~~~Gll~~~~-------~~~l~~~Ppl~it~~eid~~~~~l~~al~~~ 449 (456)
T PRK07480 408 -CFANGLIMRAV-------GDRMIISPPLVITHAEIDELVEKARKALDAT 449 (456)
T ss_pred -HHHCCcEEeec-------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 44589998652 2468998774 59999999999999998753
No 349
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.69 E-value=3.9e-14 Score=129.63 Aligned_cols=291 Identities=14% Similarity=0.051 Sum_probs=169.2
Q ss_pred EEEecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChhhhhhhccC------------cEEEEEeCCCCCCc------cc
Q 019899 20 IVLTAGATPAVEILCFCLA--DHGNALLVPSPYYPGFDRDIRFRTG------------VELIPVHCRSTDNF------AF 79 (334)
Q Consensus 20 i~~~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~~g------------~~v~~v~~~~~~~~------~~ 79 (334)
+++++++++|+..++.... ....+|+....+|.+......-..+ ..+..+|.++.... .-
T Consensus 124 ~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (459)
T PRK06931 124 QFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEA 203 (459)
T ss_pred EEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchh
Confidence 4566899999999887642 3456788888888776543220111 12333443211100 01
Q ss_pred cHHHHHHHHHHHHH----cCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhh
Q 019899 80 SITALDQAFNQARK----RGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAE 154 (334)
Q Consensus 80 ~~~~l~~~l~~~~~----~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~ 154 (334)
+.+.+++.+++... ...++.+|++...+...|.+. +.+.++.+.++|++||+++|.||++.+|...|..+. ...
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a-~~~ 282 (459)
T PRK06931 204 GVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFA-FEH 282 (459)
T ss_pred HHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHH-hhh
Confidence 23444433333221 223466565554466667755 677899999999999999999999988754443221 111
Q ss_pred hhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHH--HhhcccCCChHHHHHHHHhhCChHHHHHHHHHHH
Q 019899 155 ILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAK--KLTRFCSISAPTQRLLISMLSDTKFIQEYLETNK 232 (334)
Q Consensus 155 ~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 232 (334)
.+..--+.+++|.++ .|+++|.++. ++++ +.+. .+..+++.|+++..++.+.++..+ + ....
T Consensus 283 --------~gv~PDivt~gK~l~-gG~Pi~av~~-~~~~-~~~~~~~~~~T~~gnpla~aaala~L~~l~--~---~~l~ 346 (459)
T PRK06931 283 --------AGIEPDIIVMSKAVG-GGLPLAVLGI-KKEF-DAWQPGGHTGTFRGNQLAMATGLTTLKILK--E---ENLA 346 (459)
T ss_pred --------cCCCCCEEEeccccc-CCcceeeeee-HHHH-hhccCCCCCCCCCCCHHHHHHHHHHHHHHH--h---CCHH
Confidence 111122345799998 8899999887 5554 5543 234456788888887777775422 1 1223
Q ss_pred HHHHHHHHHHHHHHHh----CCCcccCCCceeEEeeecCCcCCC--------CChhhHHHHHHHHHHhcCeEEcCCCCcC
Q 019899 233 RRIKKLYDSFVAGLKQ----LGIRCSESSAGLYCWADMSGLIPS--------YSEKGELELWDKLLNIAKINVTPGSACH 300 (334)
Q Consensus 233 ~~~~~~~~~~~~~l~~----~g~~~~~~~~g~~~~~~~~~~~~~--------~~~~~~~~~~~~ll~~~gi~v~~g~~~~ 300 (334)
++.+++-+++.+.|++ +++......-|.++.+++.+.... ....-...+...++ ++|+.+.++...
T Consensus 347 ~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~~~~- 424 (459)
T PRK06931 347 QNAAERGEWLKAQLAELQKRYPCIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACF-ENGLLLERGGRN- 424 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHH-HCCcEEeecCCC-
Confidence 3444444455555544 333222222355555666432110 01112334566644 589998764321
Q ss_pred CCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 301 CIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 301 ~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
.+.+|+.++. +++++++++++++.+++++
T Consensus 425 ---~~~l~~~Ppl~it~~eid~~~~~l~~~l~~ 454 (459)
T PRK06931 425 ---GNVVRLLPPLLITQAECEEFIDRFEQALLA 454 (459)
T ss_pred ---CCEEEEECCCCcCHHHHHHHHHHHHHHHHH
Confidence 4678988774 6999999999999999865
No 350
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.69 E-value=1.6e-14 Score=127.66 Aligned_cols=301 Identities=14% Similarity=0.112 Sum_probs=182.1
Q ss_pred hhhhhcCCCC-CCCCcEEEecCcHHHHHHHHHHhc-------CCC-CeEEecCCCCCC-hhhhhhhccC-----------
Q 019899 5 MSQVLGQAVS-FDPSQIVLTAGATPAVEILCFCLA-------DHG-NALLVPSPYYPG-FDRDIRFRTG----------- 63 (334)
Q Consensus 5 ~~~~~~~~~~-~~~~~i~~~~g~~~~~~~~~~~l~-------~~g-d~vl~~~p~~~~-~~~~~~~~~g----------- 63 (334)
|.+++....+ -+-++|++++|+|++++.++.-.. ++. .+++.-...|.+ ....+. ..|
T Consensus 92 LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~S-v~g~~~~~~~~~~~ 170 (449)
T COG0161 92 LAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMS-VGGPVALRHAFYDP 170 (449)
T ss_pred HHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchhee-ccCchhhhhhhccc
Confidence 3444444444 347799999999999999976542 232 347777777754 222222 222
Q ss_pred --cEEEEEeCCCC------CCcc----ccHHHHHHHHHHHHHcCCceeEEEEeCC-C-CCcccCCCH-HHHHHHHHHHHh
Q 019899 64 --VELIPVHCRST------DNFA----FSITALDQAFNQARKRGVKVRGILICNP-A-NPVGNIIPR-ETLYELLDFARE 128 (334)
Q Consensus 64 --~~v~~v~~~~~------~~~~----~~~~~l~~~l~~~~~~~~~~~~i~~~~p-~-nptG~~~~~-~~l~~i~~~~~~ 128 (334)
..+..+|.++. +... -..++|++.|... +...-+.++..| . .-+|++++. ..++++.++|++
T Consensus 171 ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~---g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~k 247 (449)
T COG0161 171 LLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEH---GPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDK 247 (449)
T ss_pred cccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhc---CcccEEEEEecccccccCCcccCChHHHHHHHHHHHH
Confidence 12223333221 0011 2244555555543 423334555556 4 448886654 579999999999
Q ss_pred cCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh-------h
Q 019899 129 KNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL-------T 201 (334)
Q Consensus 129 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~-------~ 201 (334)
||+++|.||+-.+|...|+.+..-. .+..--+-+++|.++..=+++|.+++ ++++.+.+..- .
T Consensus 248 y~ILlI~DEV~tGFGRTG~~FA~e~---------~gi~PDi~~~aKGLT~GY~Pl~a~l~-~~~I~~~~~~~~~~~f~HG 317 (449)
T COG0161 248 YGILLIADEVATGFGRTGKMFACEH---------AGIVPDILCLAKGLTGGYLPLSAVLT-SDRIYEAFSDGDAGAFMHG 317 (449)
T ss_pred cCcEEEeecceeCCCcCchhhhhhh---------cCCCCCeeeecccccccchhhHhHhh-hHHHHHHHhcccCCeeccC
Confidence 9999999999998777665543222 22222344688999633378888888 88888888653 2
Q ss_pred cccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCccc--CCCceeEEeeecCCcCCCCC---
Q 019899 202 RFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL--GIRCS--ESSAGLYCWADMSGLIPSYS--- 274 (334)
Q Consensus 202 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--g~~~~--~~~~g~~~~~~~~~~~~~~~--- 274 (334)
.+|+.|+.+.+++.+-++-.+ + +.+.++.++...++.+.|++. +...+ ...-|++..+++........
T Consensus 318 ~TYsghPlacAaAla~L~i~e---~--e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~ 392 (449)
T COG0161 318 HTYSGNPLACAAALANLDILE---E--EDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFE 392 (449)
T ss_pred CccccCHHHHHHHHHHHHHHH---h--cCHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccccchh
Confidence 235677777776666654322 1 234445556667777777662 22222 23346777777766544322
Q ss_pred hhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 275 EKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 275 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
......+... +.++|+.++|.. +.+=++... +|+++++++++.+++.+++
T Consensus 393 ~~~~~~~~~~-~~e~Gl~iRp~g-------~~i~~~PPliit~~eid~l~~~l~~al~~ 443 (449)
T COG0161 393 ARVGARVRAA-ALERGLLIRPLG-------DVIYLMPPLIITREEIDELVDALREALDE 443 (449)
T ss_pred hhHHHHHHHH-HHHCCeEEeecC-------CEEEEcCCccCCHHHHHHHHHHHHHHHHH
Confidence 1122334444 666999999963 234455443 6999999999999999875
No 351
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.68 E-value=1.2e-14 Score=138.90 Aligned_cols=263 Identities=14% Similarity=0.107 Sum_probs=165.8
Q ss_pred CCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHH
Q 019899 41 GNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLY 120 (334)
Q Consensus 41 gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~ 120 (334)
.++|+++.-.|++....+. ..|.+++.++++ .+..+|+++|++.+++. ..++.+|.+++|++-++... +++
T Consensus 591 r~~vLIp~saHgtNpasa~-~~GieVv~Vp~D--~~G~iDle~L~a~I~~~---~~~laaVmiT~Pnt~Gv~e~---~V~ 661 (954)
T PRK12566 591 RDICLIPSSAHGTNPASAQ-MAGMRVVIVECD--PDGNVDLDDLKAKAAAA---GDRLSCLMITYPSTHGVYEE---GIR 661 (954)
T ss_pred CCEEEecccccccCHHHHH-HCCCEEEEeccC--CCCCcCHHHHHHHhhcc---CCCEEEEEEEecCcCceecc---hHH
Confidence 4688999988876666677 789999999985 34489999999999732 13778888888887665544 499
Q ss_pred HHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEecccccCCCC----CceEEEEeecCHHHHHH
Q 019899 121 ELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLP----GFRTGVIYSYNESVLAA 196 (334)
Q Consensus 121 ~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~----g~r~g~i~~~~~~~~~~ 196 (334)
+|+++|+++|.+|++|.++.. ....+.... +.+.+++.++++|+++.| |..+|.+.+ .+.+...
T Consensus 662 eI~~iah~~Galv~vDgA~~~------a~~~l~~Pg-----~~GADi~~~s~HKtf~~P~G~GGP~vG~iav-~~~L~pf 729 (954)
T PRK12566 662 EICEVVHQHGGQVYMDGANLN------AQVGLARPA-----DIGADVSHMNLHKTFCIPHGGGGPGMGPIGV-RAHLAPF 729 (954)
T ss_pred HHHHHHHHcCCEEEEEeeChh------hccCCCChh-----hcCCCEEEecCCcccCcCccCCCCccchhhh-hhhhhhh
Confidence 999999999999999998742 111111111 167889999999999623 333444444 4444444
Q ss_pred HHHhhc---------ccC------CChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcee
Q 019899 197 AKKLTR---------FCS------ISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSESSAGL 260 (334)
Q Consensus 197 ~~~~~~---------~~~------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~g~ 260 (334)
+..... ..+ .+......+..++.... .+ +.+.......+++++.++|.+. ++.+..+.+.+
T Consensus 730 Lp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~A~~Yi~~lG--~e-Lk~aa~~ailnAnYla~rL~~~~~v~~~~~~~~~ 806 (954)
T PRK12566 730 VANHPVVPVEGPDPNNGAVSAAPWGSASILPISWMYIAMMG--PQ-LADASEVAILSANYLANQLGGAFPVLYRGRNERV 806 (954)
T ss_pred ccCCCCcCCCCCCCCCCceeecccchHHHHHHHHHHHHHHC--HH-HHHHHHHHHHHHHHHHHHhHhhCCCCcCCCCCCe
Confidence 443210 011 11111222333333222 23 4555555667889999999773 33332222222
Q ss_pred E--EeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 261 Y--CWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 261 ~--~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
+ +.+++++... ....+..++.++|+ ++||...- ..|. .++.+|++... .+++|+|++++.|+.+.++
T Consensus 807 ~hEfii~~~~l~~-~~g~~~~dvakRL~-d~Gihapt-~~fP--v~~~LmIepTE~eskeEIDrf~eAL~~I~~e 876 (954)
T PRK12566 807 AHECILDLRPLKA-QTGISEEDVAKRLM-DYGFHAPT-MSFP--VPGTLMVEPTESESKAELDRFVEAMLSIRAE 876 (954)
T ss_pred eeEEEEEcccccc-ccCCCHHHHHHHHH-HCCcEEeE-Eeec--cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHH
Confidence 1 2234432211 11234467899977 68997543 3332 36789999885 5899999999999988765
No 352
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.67 E-value=3.6e-14 Score=128.66 Aligned_cols=284 Identities=16% Similarity=0.193 Sum_probs=170.5
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCCh------hhhhhhccCcEEEEEeCCCCCCcc
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGF------DRDIRFRTGVELIPVHCRSTDNFA 78 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~------~~~~~~~~g~~v~~v~~~~~~~~~ 78 (334)
+++.++..+++ +..+++++++.|+.+++.. +.+||+|+++...|..+ ...++ ..|.+++.++.. + .
T Consensus 127 le~~lA~l~ga--e~alvv~sg~aAi~l~l~~-l~~GdeVIvs~~e~v~~ggs~~i~~~~~-~~G~~~~~v~~~--~--~ 198 (454)
T TIGR00474 127 VEGLLCELTGA--EDALVVNNNAAAVLLALNT-LAKGKEVIVSRGELVEIGGSFRIPDVME-QSGAKLVEVGTT--N--R 198 (454)
T ss_pred HHHHHHHHhCC--CcEEEECCHHHHHHHHHHH-hCCcCEEEECCChhhhhcchhhHHHHHH-HcCCEEEEeCCC--C--C
Confidence 34445554543 4567788888899888855 57999999998764322 23445 679999998752 1 3
Q ss_pred ccHHHHHHHHHHHHHcCCceeEEEEeCCCCCc--c--cCCCHHHHHHHHHHHHhcCcEEEEeccccccccC---CC-Ccc
Q 019899 79 FSITALDQAFNQARKRGVKVRGILICNPANPV--G--NIIPRETLYELLDFAREKNIHVISDEIYGGSIFG---NE-EFV 150 (334)
Q Consensus 79 ~~~~~l~~~l~~~~~~~~~~~~i~~~~p~npt--G--~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~---~~-~~~ 150 (334)
.+++++++++++ +++++++++++|++ | ...| +++|+++|+++|+++++|.+.+.+.-. +- ...
T Consensus 199 ~~l~dle~aI~~------~T~lv~~~h~sN~~~~G~~~~~d---l~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p 269 (454)
T TIGR00474 199 THLKDYEDAITE------NTALLLKVHTSNYRIVGFTEEVS---IAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEP 269 (454)
T ss_pred CCHHHHHHhcCc------CCEEEEEEccCcccccCCCCCCC---HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCc
Confidence 578999999976 89999999999984 6 4677 999999999999999999764332100 00 011
Q ss_pred hhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh--cccCCChHH----HHHHHHhhCChH-H
Q 019899 151 SMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT--RFCSISAPT----QRLLISMLSDTK-F 223 (334)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~--~~~~~~~~~----~~~~~~~l~~~~-~ 223 (334)
....... .+.+++++|.+|++|.+ ..|++++ ++++++.++... ......-.. ...+..++...+ +
T Consensus 270 ~~~~~~~-----~GaDiv~fSg~K~LgGp--~~G~i~g-~~~~i~~l~~~~l~r~lr~~k~~la~l~~~l~~~~~~~~a~ 341 (454)
T TIGR00474 270 TVQEVIA-----AGVDLVTFSGDKLLGGP--QAGIIVG-KKELIERLKKNPLTRALRVDKLTLAALEATLRLYLDPEKAL 341 (454)
T ss_pred ccccHhH-----cCCCEEEecCccccCCC--eEEEEEE-CHHHHHhhhhchhHHHHhhChHHHHHHHHHHHHHhCchhhh
Confidence 1122222 57779999999998634 4788888 677777665321 111111111 122222222111 1
Q ss_pred H----HHHHHHHHHHHHHHHHHHHHHHHhC---CC--cccCCC----c---------eeEEeeecCCcCCCCChhhHHHH
Q 019899 224 I----QEYLETNKRRIKKLYDSFVAGLKQL---GI--RCSESS----A---------GLYCWADMSGLIPSYSEKGELEL 281 (334)
Q Consensus 224 ~----~~~~~~~~~~~~~~~~~~~~~l~~~---g~--~~~~~~----~---------g~~~~~~~~~~~~~~~~~~~~~~ 281 (334)
. ...+....+++.++++.+.+.|++. ++ ++.... + ++.+.++... ....++
T Consensus 342 ~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~~~-------~~~~~l 414 (454)
T TIGR00474 342 EKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTLTPDG-------LSAEKL 414 (454)
T ss_pred hhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEEecCC-------CCHHHH
Confidence 0 1123344456667777888888663 22 222211 1 1222222111 234566
Q ss_pred HHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHHHHH
Q 019899 282 WDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERI 326 (334)
Q Consensus 282 ~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l~~l 326 (334)
..+ |++....|... ..++.+.+.+..+.++|++.++++|
T Consensus 415 ~~~-lr~~~~~ii~r-----~~~~~~~ld~r~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 415 EAR-LRELPPPIIGR-----IEDDRFLLDLRTLLEDEEELLIEAL 453 (454)
T ss_pred HHH-HhcCCCCEEEE-----EECCEEEEEeCcCCHHHHHHHHHHh
Confidence 766 66555444321 2356677877767888988888776
No 353
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.67 E-value=1.3e-14 Score=129.07 Aligned_cols=245 Identities=19% Similarity=0.223 Sum_probs=160.8
Q ss_pred hhhhhhhhcCCCCC-----CCCcEEEecCcHHHHHHHHHHhcC--------CC------CeEEecCCCCCChhhhhhhcc
Q 019899 2 AGFMSQVLGQAVSF-----DPSQIVLTAGATPAVEILCFCLAD--------HG------NALLVPSPYYPGFDRDIRFRT 62 (334)
Q Consensus 2 ~~~~~~~~~~~~~~-----~~~~i~~~~g~~~~~~~~~~~l~~--------~g------d~vl~~~p~~~~~~~~~~~~~ 62 (334)
.+|+.+.++ ++. +...=++|+|+|+++..++.+..+ .| -.|++++-+|++...++. .+
T Consensus 85 i~~l~~l~g--~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~-~l 161 (373)
T PF00282_consen 85 IRWLADLFG--LPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAAR-IL 161 (373)
T ss_dssp HHHHHHHTT--GSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHH-HT
T ss_pred HHHHHHHhC--CcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcc-ee
Confidence 356676666 331 124578899999999887765421 11 257777779999999999 99
Q ss_pred CcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEecccccc
Q 019899 63 GVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGS 142 (334)
Q Consensus 63 g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~ 142 (334)
|..++.||++ .++.+|+++|+++|++...+|..+-+|+.+.+++.+|.+-| +++|.++|+++++|+++|.+|++.
T Consensus 162 Glg~~~I~~~--~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~---l~~i~~i~~~~~~wlHVDaA~gg~ 236 (373)
T PF00282_consen 162 GLGVRKIPTD--EDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDP---LEEIADICEKYNIWLHVDAAYGGS 236 (373)
T ss_dssp TSEEEEE-BB--TTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-S---HHHHHHHHHHCT-EEEEEETTGGG
T ss_pred eeEEEEecCC--cchhhhHHHhhhhhcccccccccceeeeccCCCcccccccC---HHHHhhhccccceeeeeccccccc
Confidence 9999999984 46689999999999987777766767888888999999988 999999999999999999999983
Q ss_pred ccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh-hcc------------------
Q 019899 143 IFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL-TRF------------------ 203 (334)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~-~~~------------------ 203 (334)
.+-.+.......-. ...+=+..++||+++ .....|+++.+++......... ..+
T Consensus 237 ~~~~~~~~~~~~gi------~~adSit~d~HK~l~-~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~t 309 (373)
T PF00282_consen 237 ALLSPEYRHLLFGI------ERADSITIDPHKWLG-VPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYT 309 (373)
T ss_dssp GGGHCTTGGGGTTG------GGESEEEEETTTTTS--SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGS
T ss_pred cccccccccccccc------ccccccccchhhhhc-CCccceeEEeecccchHHHhccChhhhccccccccccccccccc
Confidence 32111111111111 122234558999997 6678999999777654432111 010
Q ss_pred cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCC-ceeEE
Q 019899 204 CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSESS-AGLYC 262 (334)
Q Consensus 204 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~-~g~~~ 262 (334)
...+. ...++..++.-..+..+.+.+..++..+.++++.+.|++. ++++..+. -+.++
T Consensus 310 l~~SR-~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vc 369 (373)
T PF00282_consen 310 LQGSR-RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVC 369 (373)
T ss_dssp SSSSG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEE
T ss_pred ccccc-cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEE
Confidence 11222 4444444443333345667888888999999999999998 57876543 34433
No 354
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.67 E-value=5.1e-14 Score=135.42 Aligned_cols=264 Identities=16% Similarity=0.121 Sum_probs=169.8
Q ss_pred CCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHH
Q 019899 40 HGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETL 119 (334)
Q Consensus 40 ~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l 119 (334)
+.++|+++.-.|+.....+. ..|.+++.++++ .+..+|+++|++++++ ++.++++|++++|+| +|.+.+ ++
T Consensus 577 ~R~~vlip~saHgtnPasa~-~~G~~Vv~V~~d--~~G~iDle~L~~~i~~---~~~~taaV~iT~pst-~G~~e~--~I 647 (939)
T TIGR00461 577 HRNICLIPVSAHGTNPASAA-MAGMQVVPVNCD--QDGNIDLVDLKNKAEQ---HGDELAAVMVTYPST-HGVFEP--TI 647 (939)
T ss_pred CCCEEEEEccccCcCHHHHH-HCCCEEEEeccC--CCCCcCHHHHHHHHhh---cCCceEEEEEEeCCc-Cceecc--cH
Confidence 34689999999988877788 889999999983 4558999999999975 234789999999998 677643 39
Q ss_pred HHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEecccccCC----CCCceEEEEeecCHHHHH
Q 019899 120 YELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLS----LPGFRTGVIYSYNESVLA 195 (334)
Q Consensus 120 ~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~----~~g~r~g~i~~~~~~~~~ 195 (334)
++|+++|+++|.++++|.++... ...+.... +.+.++++.|.+|+++ ..|..+|.+.+ .+.+..
T Consensus 648 ~eI~~iah~~G~~v~VDgAq~~a------l~~l~~Pg-----~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~v-r~~L~~ 715 (939)
T TIGR00461 648 QHACDIVHSFGGQVYLDGANMNA------QVGLTSPG-----DLGADVCHLNLHKTFCIPHGGGGPGMGPIGV-KSHLIP 715 (939)
T ss_pred HHHHHHHHHcCCEEEEEecChhh------CCCCCCcc-----ccCCCEEEecCCccCCCCCCCCCCCeEEEEE-hhhchh
Confidence 99999999999999999997431 11111111 1677889999999875 34556799988 444433
Q ss_pred HHHHh------------h------cccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC-
Q 019899 196 AAKKL------------T------RFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSES- 256 (334)
Q Consensus 196 ~~~~~------------~------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~- 256 (334)
.+... + .....+......+..+++.. ..+.+.+..+..-.+++++.++|++ ++++.-+
T Consensus 716 ~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~l--G~~GL~~~a~~ailnAnYl~~rL~~-~~~~l~~~ 792 (939)
T TIGR00461 716 FLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIKMM--GNEGLPKASVVAILNANYMATRLKD-HYPILFVG 792 (939)
T ss_pred hcCCCcccccccCCCCccccccccccccCcHHHHHHHHHHHHHH--CHHHHHHHHHHHHHHHHHHHHHhhc-cCcccccC
Confidence 33100 0 00111111112222222221 1344567777778899999999987 5554432
Q ss_pred Ccee-E--EeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 257 SAGL-Y--CWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 257 ~~g~-~--~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
..+. + +.+++++. ......+..++.++|++ +|+.... ..|.. .+.+-+.++. .+.+|||++++.+.++-++
T Consensus 793 ~~~~~~hEfv~~~~~~-~~~~g~~~~dIakrL~d-~G~hapt-~~~pv--~g~lmiepTE~eskeelD~f~~al~~I~~e 867 (939)
T TIGR00461 793 TLKHVAHECILDLRPL-KAKTGIEAIDVAKRLQD-YGFHAPT-LSFPV--PGTLMVEPTESESLEELDRFCDAMIAIKEE 867 (939)
T ss_pred CCCceeEEEEEeccch-hhhcCCCHHHHHHHHHh-CCeeccc-cCCcc--CCeEEEEeeccCCHHHHHHHHHHHHHHHHH
Confidence 1222 1 23455532 11222355789999655 8987533 32322 3345555553 6889999999999887654
No 355
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.64 E-value=1.7e-13 Score=125.03 Aligned_cols=281 Identities=14% Similarity=0.123 Sum_probs=163.5
Q ss_pred CCCcEEEecCcHHHHHHHHHHhc--------CC------CCeEEecCCCCCChhhhhhhccCcEE-E----------EEe
Q 019899 16 DPSQIVLTAGATPAVEILCFCLA--------DH------GNALLVPSPYYPGFDRDIRFRTGVEL-I----------PVH 70 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l~--------~~------gd~vl~~~p~~~~~~~~~~~~~g~~v-~----------~v~ 70 (334)
..+.+++++++++|+..++.... .+ ..+|+....+|.+......-..|... . .++
T Consensus 109 ~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~ 188 (443)
T PRK08297 109 ELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRID 188 (443)
T ss_pred CCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccC
Confidence 34689999999999999987652 01 25788888888775443220222110 0 011
Q ss_pred CCCC----CCcc---------ccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccC-CCHHHHHHHHHHHHhcCcEEEEe
Q 019899 71 CRST----DNFA---------FSITALDQAFNQARKRGVKVRGILICNPANPVGNI-IPRETLYELLDFAREKNIHVISD 136 (334)
Q Consensus 71 ~~~~----~~~~---------~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~vi~D 136 (334)
.... .+.. -+++++++.+.+ +..++.+|++...+...|.+ .|.+.++++.++|++||+++|.|
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~D 265 (443)
T PRK08297 189 NPKLRFPLPGEDLEEVEALEAEALAQARAAFER---HPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFD 265 (443)
T ss_pred CCCCCCCCcccccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 1000 0000 123444555543 23467766665446666765 56778999999999999999999
Q ss_pred ccccccccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHH-------HhhcccCCChH
Q 019899 137 EIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAK-------KLTRFCSISAP 209 (334)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~-------~~~~~~~~~~~ 209 (334)
|++.+|...|..+.. ..+ +..+| +.+++|.++ +|.++. .+++.+... .+..+++.|++
T Consensus 266 EV~tGfGRtG~~~a~-~~~----gv~PD----iv~~gK~l~-----~~a~l~-~~~i~~~~~~~~~~~~~~~~T~~gnpl 330 (443)
T PRK08297 266 EVQTGVGLTGTAWAY-QQL----GVRPD----IVAFGKKTQ-----VCGIMA-GRRVDEVEDNVFAVSSRINSTWGGNLV 330 (443)
T ss_pred chhhccCccchHHHH-Hhc----CCCCC----EEEeccccc-----ccceec-chHHHHhhhhhccCccccCCCCCccHH
Confidence 999876554432211 111 11122 225789884 233334 233322211 13345667888
Q ss_pred HHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CCc--ccCCCceeEEeeecCCcCCCCChhhHHHHHH
Q 019899 210 TQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL----GIR--CSESSAGLYCWADMSGLIPSYSEKGELELWD 283 (334)
Q Consensus 210 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----g~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 283 (334)
+..++.+.++..+ + ....++++++-+++.+.|++. +.- .+.. .|.++.++++.. .....+..
T Consensus 331 ~~aaa~a~L~~l~--~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg-~G~~~~i~~~~~------~~~~~~~~ 398 (443)
T PRK08297 331 DMVRARRILEVIE--E---DGLVENAARQGEYLLARLEELAAEFPAVVSNVRG-RGLMCAFDLPTT------ADRDEVIR 398 (443)
T ss_pred HHHHHHHHHHHHH--h---cCHHHHHHHHHHHHHHHHHHHHHHCCCcceeeec-cceEEEEEecCH------HHHHHHHH
Confidence 8777777765322 1 123334444455555555442 211 1223 366677777532 12346777
Q ss_pred HHHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 284 KLLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 284 ~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
.++ ++||.+.|+. .+.+|++.+. ++++++++++++|.+++++.
T Consensus 399 ~l~-~~Gvl~~~~~------~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 399 RLW-EEGVLVLPCG------ERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred HHH-HCCEEEecCC------CCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 755 5899998743 2468887664 69999999999999998764
No 356
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.64 E-value=6.9e-14 Score=126.19 Aligned_cols=152 Identities=11% Similarity=0.115 Sum_probs=119.0
Q ss_pred CcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCC----ccccHHHHHHHHHHHHH
Q 019899 18 SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDN----FAFSITALDQAFNQARK 93 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~----~~~~~~~l~~~l~~~~~ 93 (334)
..-+++||+|.++.+++.+++.+||.||++.++|.+....+- +.|+.++++....+.. .+++.+.+++++.+.
T Consensus 87 ~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~gli-laGa~Pvyl~p~~np~~gi~ggI~~~~~~~~l~~~-- 163 (557)
T COG1982 87 HTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLI-LAGATPVYLEPSRNPLYGIIGGIPLETFKEALLAH-- 163 (557)
T ss_pred ceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHH-HcCCceEEecCCCCccccccCCCCHHHHHHHHHhC--
Confidence 478999999999999999999999999999999999999987 8999998887644332 357999999987764
Q ss_pred cCCce-eEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEecc
Q 019899 94 RGVKV-RGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGL 172 (334)
Q Consensus 94 ~~~~~-~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 172 (334)
... |++++++|+. .|.+++ ++++.+++...++|+.+|+++....-....... +....+.+++..|.
T Consensus 164 --~~~~k~~vitnpTY-dGv~~n---~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~-------~~~~~~~~~~tqS~ 230 (557)
T COG1982 164 --PDAEKLAVITNPTY-DGVCYN---LRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPE-------SALNGGADFVTQST 230 (557)
T ss_pred --hhhheeEEEecCcc-ceEeec---HHHHHHHHhhcCceEEhhhcCcccccccccCcc-------hhhhcCceEEEech
Confidence 233 7889998875 699999 999999999999999999998653321111111 12236888999999
Q ss_pred cccCCCCCceEEEEe
Q 019899 173 SKDLSLPGFRTGVIY 187 (334)
Q Consensus 173 sK~~~~~g~r~g~i~ 187 (334)
+|.++ ++..+..+
T Consensus 231 HK~l~--alSQaS~i 243 (557)
T COG1982 231 HKLLA--ALSQASMI 243 (557)
T ss_pred hhhhh--hhhhhHHH
Confidence 99884 44444443
No 357
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.62 E-value=6.3e-13 Score=113.01 Aligned_cols=296 Identities=14% Similarity=0.109 Sum_probs=183.4
Q ss_pred hhcCCCCCCCCcEEEecCcHHHHHHHHHHh---cCCCCeEEecCCCCCCh-hhhhhhccCcEEEEEeCC-----------
Q 019899 8 VLGQAVSFDPSQIVLTAGATPAVEILCFCL---ADHGNALLVPSPYYPGF-DRDIRFRTGVELIPVHCR----------- 72 (334)
Q Consensus 8 ~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l---~~~gd~vl~~~p~~~~~-~~~~~~~~g~~v~~v~~~----------- 72 (334)
.+...++-+-..++++|++++|+.+++.-. .+.- .++--..+|.+. ...+. +.|......+++
T Consensus 100 ~L~s~~P~~l~~vfF~nsGsEANelal~mar~Yt~~~-diIa~r~~YHG~t~~t~g-lt~~~~~k~~~~~~~~~~~~~~~ 177 (442)
T KOG1404|consen 100 ALVSKLPGDLKVVFFVNSGSEANELALKMARLYTGNL-DIIARRNSYHGNTLYTLG-LTGLSPWKQNFPGVASGVHHTMN 177 (442)
T ss_pred HHHHhCCCCceEEEEecCCchHHHHHHHHHHHhcCCc-eEEEeeccccCCchhhcc-cccCCcccccCCCCCCcccccCC
Confidence 344445666678999999999999887654 2333 455555555543 33333 333333322211
Q ss_pred -C--CCCccc-----cHHHHHHHHHHHHHc-C-CceeEEEEeCCCCCcccC-CCHHHHHHHHHHHHhcCcEEEEeccccc
Q 019899 73 -S--TDNFAF-----SITALDQAFNQARKR-G-VKVRGILICNPANPVGNI-IPRETLYELLDFAREKNIHVISDEIYGG 141 (334)
Q Consensus 73 -~--~~~~~~-----~~~~l~~~l~~~~~~-~-~~~~~i~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~vi~D~~~~~ 141 (334)
+ ..-+.- ..+.+.+.+++.... + ..+.+++...-+...|++ ++...+++..++|+++|.++|.||++.+
T Consensus 178 Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtG 257 (442)
T KOG1404|consen 178 PDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTG 257 (442)
T ss_pred CCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhc
Confidence 0 000111 144444544444321 2 234545555447666774 5666899999999999999999999998
Q ss_pred cccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh---cccCCChHHHHHHHHhh
Q 019899 142 SIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT---RFCSISAPTQRLLISML 218 (334)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l 218 (334)
|...| ++..+.. .+.+-.+.|++|.+| +|+++|.++. .+++.+.+.+.. ..++.++....+..+.+
T Consensus 258 fGRtG----~~wgfe~-----h~v~PDIvTmAKgiG-nG~Pl~AVvt-t~EIa~v~~~~~~~fnTyggnP~a~avg~aVL 326 (442)
T KOG1404|consen 258 FGRTG----HMWGFES-----HGVVPDIVTMAKGIG-NGFPLGAVVT-TPEIADVLNQKSSHFNTYGGNPVACAVGLAVL 326 (442)
T ss_pred ccccc----ccccccc-----cCCCccHHHHHhhcc-CCCcceeeec-CHHHHHHHHhccccccccCCCchhHHHHHHHH
Confidence 77665 3333332 566667789999999 9999999998 999999997655 33567888887777777
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCcccCC--CceeEEeeecCCcC-C--CCChhhHHHHHHHHHHhcCe
Q 019899 219 SDTKFIQEYLETNKRRIKKLYDSFVAGLKQL--GIRCSES--SAGLYCWADMSGLI-P--SYSEKGELELWDKLLNIAKI 291 (334)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--g~~~~~~--~~g~~~~~~~~~~~-~--~~~~~~~~~~~~~ll~~~gi 291 (334)
+-.+ ++ +++++..+.-.+|.+.|.+. ..++... .-|.++-+++-... . .........+.+. .++.|+
T Consensus 327 ~Vik--ee---~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~-cke~Gv 400 (442)
T KOG1404|consen 327 KVIK--EE---NLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQ-CKELGV 400 (442)
T ss_pred HHHH--HH---hHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCCCCCcchHHHHHHHHH-HHHhCe
Confidence 5433 33 34444555567777777664 3444322 23555556553322 1 1111222234455 677999
Q ss_pred EEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHH
Q 019899 292 NVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERI 326 (334)
Q Consensus 292 ~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l 326 (334)
.+--|..+| +.+||...- +|++|++.+++..
T Consensus 401 lvg~g~i~G----~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 401 LVGKGGIHG----NVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred eeecccccc----eEEEecCCeeccHHHHHHHHHHH
Confidence 996666554 489998663 7999997777744
No 358
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.62 E-value=1.5e-13 Score=114.11 Aligned_cols=277 Identities=17% Similarity=0.157 Sum_probs=181.0
Q ss_pred CCcEEEecCcHHHHHHHHHHhc------C--C-CC-eEEecCCCCCChhhhhhhccCcE--------------EEEEeCC
Q 019899 17 PSQIVLTAGATPAVEILCFCLA------D--H-GN-ALLVPSPYYPGFDRDIRFRTGVE--------------LIPVHCR 72 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~------~--~-gd-~vl~~~p~~~~~~~~~~~~~g~~--------------v~~v~~~ 72 (334)
-+.+..++.+.+|...++...- + | .. +|+....+|++-.-.+- .++-+ +..+|.
T Consensus 116 ~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ai-s~s~d~ds~~~fgp~~P~~~~~v~Y- 193 (427)
T KOG1402|consen 116 YDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAI-SLSTDPDSWDGFGPFLPGVVDKVPY- 193 (427)
T ss_pred cceeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeE-EecCCcchhhccCCCCCCcceeecc-
Confidence 5678899999999988876542 1 2 22 34444444443221111 11111 223332
Q ss_pred CCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHH-HHHHHHHHHHhcCcEEEEeccccccccCCCCcch
Q 019899 73 STDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRE-TLYELLDFAREKNIHVISDEIYGGSIFGNEEFVS 151 (334)
Q Consensus 73 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~-~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~ 151 (334)
-|.++|+.++++ +++.++++..-+...|+++|.+ .+++..++|.+|++++|.||++.++..+|.-..-
T Consensus 194 ------~d~eale~~l~~-----~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~ 262 (427)
T KOG1402|consen 194 ------GDAEALEVALKS-----PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLAC 262 (427)
T ss_pred ------CCHHHHHHHhcC-----CCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEe
Confidence 278999999987 3677555554488999988766 6999999999999999999999998877764432
Q ss_pred hhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHH--hhcccCCChHHHHHHHHhhCChHHHHHHHH
Q 019899 152 MAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKK--LTRFCSISAPTQRLLISMLSDTKFIQEYLE 229 (334)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 229 (334)
-.+-. .++.++ +.|.++..=.+++.+++ +++++-.++. +.+.++.|++...++.++++-.. + +
T Consensus 263 d~env-----~PDivi----lgKalSGG~~Pvsavl~-~~~im~~~~pgeHgsTyggNpLg~~vaiAalevi~--e---e 327 (427)
T KOG1402|consen 263 DYENV-----RPDIVI----LGKALSGGVYPVSAVLA-DDDIMLNIKPGEHGSTYGGNPLGCAVAIAALEVIV--E---E 327 (427)
T ss_pred ehhhc-----CCCeEE----EeccccCCeeeeEEEEe-cHHHHhccCCCccccccCCChHHHHHHHHHHHHHH--H---H
Confidence 22211 134333 56777523367899998 8888877764 45667889999888887775432 2 3
Q ss_pred HHHHHHHHHHHHHHHHHHhCC--C----cccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCC
Q 019899 230 TNKRRIKKLYDSFVAGLKQLG--I----RCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIE 303 (334)
Q Consensus 230 ~~~~~~~~~~~~~~~~l~~~g--~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~ 303 (334)
++.++....-..++..|.++. + ..+.. -|++..+.+.... .+..++-+++-. ++++|+...|-+
T Consensus 328 kL~era~~lG~~l~~~L~~l~~~~p~~v~~VRG-rGl~~ai~i~~~~--~~~~~aw~~cl~-lk~~g~LAkptH------ 397 (427)
T KOG1402|consen 328 KLVERAAKLGEILRDQLNKLQKKFPHVVKEVRG-RGLLNAIVINPSK--TSGQDAWDVCLA-LKENGLLAKPTH------ 397 (427)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccchhheeec-cceEEEEEecccc--ccchhHHHHHHc-ccccccccCCCC------
Confidence 444555555667777777652 2 12222 3566555554221 122355667777 677999998865
Q ss_pred CCeEEEEecC-CCcccHHHHHHHHHHHHH
Q 019899 304 PGWFRCCFTS-LTHEDIPLVIERIQKVAE 331 (334)
Q Consensus 304 ~~~iRi~~~~-~~~~~l~~~l~~l~~~~~ 331 (334)
.+.||+...- ++++|+++.++++.+.+.
T Consensus 398 ~~IiRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 398 GNIIRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred CCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence 4589999764 699999999999988764
No 359
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.62 E-value=1.6e-13 Score=125.00 Aligned_cols=273 Identities=12% Similarity=0.146 Sum_probs=151.6
Q ss_pred CCcEEEecCcHHHHHHHHHHhc--CCCCeEEec-CCCCCChhhh---hh-hccCc------EEEEEeCCCCCCccccHHH
Q 019899 17 PSQIVLTAGATPAVEILCFCLA--DHGNALLVP-SPYYPGFDRD---IR-FRTGV------ELIPVHCRSTDNFAFSITA 83 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~--~~gd~vl~~-~p~~~~~~~~---~~-~~~g~------~v~~v~~~~~~~~~~~~~~ 83 (334)
.+.+++++++++|+..++.... ....+|+.. ...|.+.... .. ...|. .+..++ ..|+++
T Consensus 104 ~~~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~d~~~ 176 (431)
T PRK06209 104 ADMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFR-------YNDIAS 176 (431)
T ss_pred cceEEEecCHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccC-------CCCHHH
Confidence 3689999999999999987542 223455544 2333221110 00 00111 011111 237899
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCC
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDK 163 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (334)
++++++.. ..++.+|++ .|. .|...+.+.++++.++|++||+++|+||++.++.+.+........+. +
T Consensus 177 l~~~l~~~---~~~~aavi~-Epv--~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g~~~~~gv~------P 244 (431)
T PRK06209 177 LEALFEDH---PGRIACVIL-EPA--TADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMRGAQKLYGIV------P 244 (431)
T ss_pred HHHHHHhC---CCCEEEEEE-ccc--cCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcchhhHHhCCC------c
Confidence 99988642 224554444 452 34467788899999999999999999999876644221111111111 2
Q ss_pred CcEEEEecccccCCCCCceEEEEeecCHHHHHH--HHH--------hhcccCCChHHHHHHHHhhCChHHHHHHHHHHHH
Q 019899 164 DRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAA--AKK--------LTRFCSISAPTQRLLISMLSDTKFIQEYLETNKR 233 (334)
Q Consensus 164 ~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~--~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 233 (334)
+ +.+++|.+| .|+.+|++++ ++++.+. +.. +...++.++....++.+.++..+ + ....+
T Consensus 245 D----i~t~gK~lg-gG~p~~av~~-~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~---~--~~~~~ 313 (431)
T PRK06209 245 D----LSCFGKALG-NGFAVSALAG-KREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYR---D--EDVIE 313 (431)
T ss_pred c----eeeehhhhc-CCcccEEEEE-HHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHh---c--cCHHH
Confidence 2 367899998 7889999998 7788776 311 12234455666666655554322 1 12344
Q ss_pred HHHHHHHHHHHHHHh----CCCccc-CCCceeEEeeecC-CcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeE
Q 019899 234 RIKKLYDSFVAGLKQ----LGIRCS-ESSAGLYCWADMS-GLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWF 307 (334)
Q Consensus 234 ~~~~~~~~~~~~l~~----~g~~~~-~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~i 307 (334)
+++++-+++.+.|++ +++... ...+.+....-+. .............+...+++ +||.+.| +
T Consensus 314 ~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~p~-----------l 381 (431)
T PRK06209 314 RLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQETIR-RGVLMPS-----------L 381 (431)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCeEEEeecceEEEEEecCCcccCCcHHHHHHHHHHHHH-CCccccc-----------c
Confidence 444555555555544 344321 1122222211111 11000011112245666444 7997632 4
Q ss_pred EEEecCCCcccHHHHHHHHHHHHHH
Q 019899 308 RCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 308 Ri~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
+++.. .++++++++++++.+++++
T Consensus 382 ~is~~-ht~~dId~~l~~l~~~l~~ 405 (431)
T PRK06209 382 VVSYA-HGDADIERTIDAVHGALGV 405 (431)
T ss_pred ccccc-CCHHHHHHHHHHHHHHHHH
Confidence 55543 7999999999999998865
No 360
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.61 E-value=2e-13 Score=113.29 Aligned_cols=283 Identities=14% Similarity=0.098 Sum_probs=188.4
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChh-----hhhhhccCcEEEEEeCCCC
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLA--DHGNALLVPSPYYPGFD-----RDIRFRTGVELIPVHCRST 74 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~-----~~~~~~~g~~v~~v~~~~~ 74 (334)
.+.+...++..++..+++++++.+++-.++.++.+.+ ++|++|++++-...+.. ..+. ..+.. + +
T Consensus 78 p~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~-~~~~~---~----~ 149 (407)
T COG3844 78 PERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLAD-LLGIG---Y----D 149 (407)
T ss_pred hhHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhh-hhccc---c----c
Confidence 3456677888899999999999999999999888764 45888888875433322 2222 23322 1 1
Q ss_pred CCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhh
Q 019899 75 DNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAE 154 (334)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~ 154 (334)
-...+.++++++++++ .+.++++++.+.-||+.++ +.+|.++++++|++++.|-+|+.... +..+.
T Consensus 150 ~~~~~~P~~~~~~~~d------d~AvV~L~~V~y~TGql~d---m~aiT~~AH~~galv~wDLAHsaGav----p~~Lh- 215 (407)
T COG3844 150 LEGVIAPRALEEAITD------DVAVVLLSHVNYKTGQLLD---MRAITALAHQHGALVGWDLAHSAGAV----PVDLH- 215 (407)
T ss_pred ceeeeChHHHHHhhcc------ceEEEEeccccccccceee---HHHHHHHHHhcCceEEeehhcccCCc----ceeec-
Confidence 2224567789999987 8888999999999999999 99999999999999999999986332 22222
Q ss_pred hhhccccCCCcEEEEecccccC-CCCCceEEEEeecCHHHHHHHH-Hhhcc---------------------c---CCCh
Q 019899 155 ILEAEEVDKDRVHIIYGLSKDL-SLPGFRTGVIYSYNESVLAAAK-KLTRF---------------------C---SISA 208 (334)
Q Consensus 155 ~~~~~~~~~~~~~~~~s~sK~~-~~~g~r~g~i~~~~~~~~~~~~-~~~~~---------------------~---~~~~ 208 (334)
..+.++.|+|..|.+ |.||-. +++.. .+...+... ..+.. | +.+.
T Consensus 216 -------~~gaDfaigcsyKYLNgGPGap-a~l~v-~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V 286 (407)
T COG3844 216 -------AAGADFAIGCSYKYLNGGPGAP-AGLFV-APRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPV 286 (407)
T ss_pred -------ccCCCeeeeeeceeccCCCCCc-eeEEe-ccccccccccccccccCCCCcchhhhccCcCccccceeeCCcch
Confidence 167789999999999 335644 44444 233222211 11111 1 1222
Q ss_pred HHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CCcccCCCc----eeEEeeecCCcCCCCChhhHHH
Q 019899 209 PTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL----GIRCSESSA----GLYCWADMSGLIPSYSEKGELE 280 (334)
Q Consensus 209 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----g~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~ 280 (334)
.+..++...|.-.. .-.+.+++++......++.+.++.. ++++..|.. |-.+.+..|. ..+
T Consensus 287 ~s~aal~~aLDifa--~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp~---------~~~ 355 (407)
T COG3844 287 LSLAALEGALDIFA--DVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHPH---------GYQ 355 (407)
T ss_pred hhhHHHhhhhhhhh--hcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecCc---------HHH
Confidence 33333333332211 1225777888888888888888775 566555432 3445455553 367
Q ss_pred HHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC--CCcccHHHHHHHHHHHHHHc
Q 019899 281 LWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS--LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 281 ~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~--~~~~~l~~~l~~l~~~~~~~ 333 (334)
+.+. |.++||..-- -.++.+|+.+.. .+-+|+=.+++.|.+++++.
T Consensus 356 V~qa-Li~rGVigD~------R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~ 403 (407)
T COG3844 356 VMQA-LIDRGVIGDF------REPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTL 403 (407)
T ss_pred HHHH-HHHcCccccc------cCCCeeeecCccceechhHHHHHHHHHHHHHHhh
Confidence 8888 5558987421 137889999885 48899999999999999764
No 361
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.61 E-value=1.4e-13 Score=125.20 Aligned_cols=280 Identities=13% Similarity=0.087 Sum_probs=163.3
Q ss_pred CCCcEEEecCcHHHHHHHHHHhcC--------------------------C---CCeEEecCCCCCChhhhhhhccCc--
Q 019899 16 DPSQIVLTAGATPAVEILCFCLAD--------------------------H---GNALLVPSPYYPGFDRDIRFRTGV-- 64 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l~~--------------------------~---gd~vl~~~p~~~~~~~~~~~~~g~-- 64 (334)
+.+.+++++++++|+..++..... + ..+|+....+|.+......-..+.
T Consensus 121 ~~~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~ 200 (464)
T TIGR00699 121 GQDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKP 200 (464)
T ss_pred CcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCcc
Confidence 346899999999999998876520 0 126888888887654432202221
Q ss_pred ---------EEEEEeCCCC-C--C---------ccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCC-CHHHHHHH
Q 019899 65 ---------ELIPVHCRST-D--N---------FAFSITALDQAFNQARKRGVKVRGILICNPANPVGNII-PRETLYEL 122 (334)
Q Consensus 65 ---------~v~~v~~~~~-~--~---------~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~-~~~~l~~i 122 (334)
.+..+|.++. . . ..-+++.+++++++ .+.++.+|++.......|.+. +.+.++++
T Consensus 201 ~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~---~~~~iAAvI~EPv~g~~G~~~~~~~yl~~l 277 (464)
T TIGR00699 201 IHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKK---WHKPVAAIIVEPIQSEGGDNHASPDFFRKL 277 (464)
T ss_pred ccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHh---cCCcEEEEEEeCCCCCCCCcCCCHHHHHHH
Confidence 1122222110 0 0 01145566666653 223567666664477778877 67789999
Q ss_pred HHHHHhcCcEEEEeccccccccCCCCcc-hhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHH--H
Q 019899 123 LDFAREKNIHVISDEIYGGSIFGNEEFV-SMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAK--K 199 (334)
Q Consensus 123 ~~~~~~~~~~vi~D~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~--~ 199 (334)
.++|++||+++|+||++.++...|..+. ....+. ..- -+.+++|.++..| +++. ++.+ .... .
T Consensus 278 r~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~------~~P--Di~t~gK~lg~gG----~~~~-~~~~-~~~~~~~ 343 (464)
T TIGR00699 278 RDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLD------DPP--DMVTFSKKFQTAG----YFFH-DPAF-RPNKPYR 343 (464)
T ss_pred HHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCC------CCC--CEEEehhhhccCC----cccc-chhc-cCCCCcc
Confidence 9999999999999999987654443211 111111 011 2356899995244 3333 3221 1101 1
Q ss_pred hhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--Cc----ccC-CCceeEEeeecCCcCCC
Q 019899 200 LTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLG--IR----CSE-SSAGLYCWADMSGLIPS 272 (334)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--~~----~~~-~~~g~~~~~~~~~~~~~ 272 (334)
+..+++.++.+..++.+.++..+ + ....++.+++-+++.+.|+++. .. -+. ...|.++.++++..
T Consensus 344 ~~~T~~gnp~~~aaa~a~L~~l~--~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~~--- 415 (464)
T TIGR00699 344 QFNTWMGDPSRALILREIIQEIK--R---KDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPDE--- 415 (464)
T ss_pred cccCCCCCHHHHHHHHHHHHHHH--h---cCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCCH---
Confidence 33456677777777776664322 1 2334445555556666665531 22 111 13466666777531
Q ss_pred CChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHH
Q 019899 273 YSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVA 330 (334)
Q Consensus 273 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~ 330 (334)
.....+...+++ +|+.+.+. ..+.+||..+. ++++|++.++++|.+++
T Consensus 416 ---~~~~~i~~~~~~-~Gvl~~~~------g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 416 ---AKRDKLLKKARN-NGVNIGGC------GVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred ---HHHHHHHHHHHH-CCcEEecC------CCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 123466777555 79998653 13679999775 69999999999998763
No 362
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.61 E-value=1.4e-13 Score=134.00 Aligned_cols=273 Identities=16% Similarity=0.130 Sum_probs=176.5
Q ss_pred hhhhcCCCCCCCCcEEEecCcHHHHHHHHHHh-cCC--CCeEEecCCCCCChhhhhhh---ccCcEEEEEeCCCCCCccc
Q 019899 6 SQVLGQAVSFDPSQIVLTAGATPAVEILCFCL-ADH--GNALLVPSPYYPGFDRDIRF---RTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 6 ~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l-~~~--gd~vl~~~p~~~~~~~~~~~---~~g~~v~~v~~~~~~~~~~ 79 (334)
+..++...+++++++-++.++|++.++++.++ .++ +++|++++..|+.+...++. ..|.+++.++....
T Consensus 154 Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~----- 228 (993)
T PLN02414 154 QTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF----- 228 (993)
T ss_pred HHHHHHHhCCChhhEeecCChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh-----
Confidence 34455667899999999999999999888776 343 47899999999998877752 35899999986210
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
+ ... ..+-.+++..| |.+|.+.| +++|+++|+++|+++++ .++.. ....+.+...
T Consensus 229 ~------~~~------~~v~~vlvq~P-~~~G~v~d---v~~I~~~ah~~GaL~iV-aad~l------al~~l~~pge-- 283 (993)
T PLN02414 229 D------YSS------GDVCGVLVQYP-ATDGEVLD---YAEFVKNAHANGVKVVM-ATDLL------ALTMLKPPGE-- 283 (993)
T ss_pred c------ccc------CceEEEEEecC-CCCeEEcC---HHHHHHHHHHcCCEEEE-EECHH------HhcCCCCHhh--
Confidence 0 011 13334444444 45899998 99999999999999999 44322 1122222222
Q ss_pred ccCCCcEEEEecccccC---CCCCceEEEEeecCHHHHHHHH-Hhh-------------------------cccCCChHH
Q 019899 160 EVDKDRVHIIYGLSKDL---SLPGFRTGVIYSYNESVLAAAK-KLT-------------------------RFCSISAPT 210 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~---~~~g~r~g~i~~~~~~~~~~~~-~~~-------------------------~~~~~~~~~ 210 (334)
.+.++++++..|+. |..|.+.|++.+ ++++.+.+. +.- ..++.|..+
T Consensus 284 ---~GADi~vgsgqKwg~P~G~GGP~aGflav-r~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict 359 (993)
T PLN02414 284 ---WGADIVVGSAQRFGVPMGYGGPHAAFLAT-SQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICT 359 (993)
T ss_pred ---ccCcEEEECCCccccCCCCCCCCeeEEEE-CHHHHhhCCCcccCcccCCCCCcccccccccccchhhhcccccchhH
Confidence 67889999999987 223456899998 555544332 000 011223323
Q ss_pred HHHHHHhhCCh---HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHH
Q 019899 211 QRLLISMLSDT---KFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLN 287 (334)
Q Consensus 211 ~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 287 (334)
..++.+.+... .+...-+.+..+++..+..++.+.|+..|+++..+.-.-.+.++++. ..++.++| .
T Consensus 360 ~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G~~~~~~~~f~~vt~~~~~---------~~~v~~~L-~ 429 (993)
T PLN02414 360 AQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLGFQVQSLPFFDTVKVKCSD---------ADAIADAA-A 429 (993)
T ss_pred HHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhcCCccCCCCCcCeEEEecCC---------HHHHHHHH-H
Confidence 33333333211 01123356777888899999999998888877544211123344431 25788885 5
Q ss_pred hcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHH
Q 019899 288 IAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQK 328 (334)
Q Consensus 288 ~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~ 328 (334)
++||.+.... ++.+|+|+.. .|++||+.+++.|..
T Consensus 430 ~~gI~l~~~~------~~~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 430 KVGINLRVVD------ANTVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred HCCCeeEEec------CCeEEEEeeccCCHHHHHHHHHHHcc
Confidence 5899775321 3569999996 599999999999963
No 363
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.59 E-value=1.5e-12 Score=125.36 Aligned_cols=230 Identities=14% Similarity=0.035 Sum_probs=141.0
Q ss_pred HHHHHHHHHHH--HcCCceeEEEEeCC-CCCcccCC-CHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhh
Q 019899 82 TALDQAFNQAR--KRGVKVRGILICNP-ANPVGNII-PRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILE 157 (334)
Q Consensus 82 ~~l~~~l~~~~--~~~~~~~~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~ 157 (334)
+.+++.|++.. ..+.++.++++.-. +...|++. +.+.++.+.++|++||+++|.||++.+|...|..+..- .
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e-~--- 642 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWE-L--- 642 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHH-h---
Confidence 44566665322 12345665555542 57778876 56679999999999999999999999887666543211 1
Q ss_pred ccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHH--------hhcccCCChHHHHHHHHhhCChHHHHHHH
Q 019899 158 AEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKK--------LTRFCSISAPTQRLLISMLSDTKFIQEYL 228 (334)
Q Consensus 158 ~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 228 (334)
.+..--+.+++|.++ .| +++|.+++ ++++.+.+.. +...|+.++.+..++.+.++..+. ++..
T Consensus 643 -----~gv~PDIi~~gKgLt-gG~~Plaa~l~-~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~-~~~~ 714 (817)
T PLN02974 643 -----LGCKPDIACYAKLLT-GGLVPLAATLA-TEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKD-PSTN 714 (817)
T ss_pred -----cCCCCCEEeeccccc-CCCCccEEEEE-cHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHc-ccHH
Confidence 122223446889998 88 69999999 8899888842 234567888888888777754321 1111
Q ss_pred HHHHHHHHHHHHHHHHHH----HhCCCcccCCCceeEEeeecCCcCC--CCChhhHHHHHHHHHHhcCeEEcCCCCcCCC
Q 019899 229 ETNKRRIKKLYDSFVAGL----KQLGIRCSESSAGLYCWADMSGLIP--SYSEKGELELWDKLLNIAKINVTPGSACHCI 302 (334)
Q Consensus 229 ~~~~~~~~~~~~~~~~~l----~~~g~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~ 302 (334)
....+...+..+++.+.| .++..-.....-|.++.+++..... ......+..+...++.++||.++|..
T Consensus 715 ~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~G----- 789 (817)
T PLN02974 715 PNLIPPGSRLRELWDEELVRAISSLPNVERVVSLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPLG----- 789 (817)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEecC-----
Confidence 223333333334444444 3332111111235666677753211 11112234566775536899998732
Q ss_pred CCCeEEEEecC-CCcccHHHHHHHHHHHH
Q 019899 303 EPGWFRCCFTS-LTHEDIPLVIERIQKVA 330 (334)
Q Consensus 303 ~~~~iRi~~~~-~~~~~l~~~l~~l~~~~ 330 (334)
+.+|+.... +++++++++++.|.+.+
T Consensus 790 --nvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 790 --NVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred --CEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 468876654 69999999999998765
No 364
>PLN02452 phosphoserine transaminase
Probab=99.58 E-value=4.6e-13 Score=118.57 Aligned_cols=265 Identities=11% Similarity=0.097 Sum_probs=173.7
Q ss_pred EEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCC--hhhhhhhccCcEEEEEeCCC-CCCccccHHHHHHHHHHHHHcCC
Q 019899 20 IVLTAGATPAVEILCFCLADHGNALLVPSPYYPG--FDRDIRFRTGVELIPVHCRS-TDNFAFSITALDQAFNQARKRGV 96 (334)
Q Consensus 20 i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~--~~~~~~~~~g~~v~~v~~~~-~~~~~~~~~~l~~~l~~~~~~~~ 96 (334)
+++..|+|.++.++..+++.+|+++++....+++ ..+.++ .+|...+...... .....+++++++. . .
T Consensus 74 ~~l~Gsgt~~~ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~-~~g~~~~~~~~~~~~~~~~~~~~~~~~--~------~ 144 (365)
T PLN02452 74 LFLQGGASTQFAAIPLNLCKPGDKADFVVTGSWSKKAAKEAK-KYCKTNVIASGKDEKYTKIPSVSEWEL--T------P 144 (365)
T ss_pred EEEeCccHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHH-HhCCCcEEEecCCCCCCCCCChHHcCC--C------C
Confidence 5555678999999999999999988887655554 233344 5665333332111 1112356555421 1 2
Q ss_pred ceeEEEEeCCCCCcccC-CCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEeccccc
Q 019899 97 KVRGILICNPANPVGNI-IPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKD 175 (334)
Q Consensus 97 ~~~~i~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~ 175 (334)
+++.+.+++..+.||+. .+ ++++. ++++++|.+.+. +....++.. ++. ...|..|.
T Consensus 145 ~~~~v~~~hnETstGv~~~~---~~~i~------~~~lvVDa~Ss~----g~~pidv~~--------~~v--~~~saqK~ 201 (365)
T PLN02452 145 DAKFVHICANETIHGVEFKD---YPDVG------NVPLVADMSSNF----LSKPVDVSK--------YGV--IYAGAQKN 201 (365)
T ss_pred CCcEEEECCCCCCCcEecCc---ccccC------CCeEEEECCccc----cCcccCHHH--------cCE--EEEecccc
Confidence 67889999999999996 55 44443 389999998765 223334432 333 33599999
Q ss_pred CCCCCceEEEEeecCHHHHHHHHHh--------------hcccCCChHHHHHHHHhhCChHHHHH--HHHHHHHHHHHHH
Q 019899 176 LSLPGFRTGVIYSYNESVLAAAKKL--------------TRFCSISAPTQRLLISMLSDTKFIQE--YLETNKRRIKKLY 239 (334)
Q Consensus 176 ~~~~g~r~g~i~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~ 239 (334)
+|++| +|.+++ ++++++++... +.+++++....+++...++ |+.+ .++.+.++.++++
T Consensus 202 lGP~G--l~~v~v-r~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~---~l~~~gGl~~~~~r~~~~a 275 (365)
T PLN02452 202 VGPSG--VTIVII-RKDLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFE---DLLAQGGLKAMEKRNIRKA 275 (365)
T ss_pred cCCCC--eEEEEE-cHHHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHH---HHHHccCHHHHHHHHHHHH
Confidence 99777 688888 66666554321 1113445555565555554 3333 3688899999999
Q ss_pred HHHHHHHHhC-CCcc--cCC--CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-
Q 019899 240 DSFVAGLKQL-GIRC--SES--SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS- 313 (334)
Q Consensus 240 ~~~~~~l~~~-g~~~--~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~- 313 (334)
+++.+.|++. |+.. ..+ ...+.+.+.++.. ....++.+. ++++|+...+|+.. -+.+|+|+-+
T Consensus 276 ~~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~~~------~~~~~f~~~-~~~~g~~~~~G~r~----~gg~R~s~yna 344 (365)
T PLN02452 276 DLLYDAIDESNGFYVCPVEKSVRSLMNVPFTLGGS------ELEAEFVKE-AAKAGMVQLKGHRS----VGGMRASIYNA 344 (365)
T ss_pred HHHHHHHHhCCCcccCCCChHHhCCeEEEEEcCCc------hhHHHHHHH-HHHCCCcccCCccc----cCceEEECcCC
Confidence 9999999885 6621 111 2344555666653 133567777 77799999998864 1239999764
Q ss_pred CCcccHHHHHHHHHHHHHHc
Q 019899 314 LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 314 ~~~~~l~~~l~~l~~~~~~~ 333 (334)
++.++++.+++.++++-+++
T Consensus 345 ~~~~~v~~L~~~m~~f~~~~ 364 (365)
T PLN02452 345 MPLAGVEKLVAFMKDFQAKH 364 (365)
T ss_pred CCHHHHHHHHHHHHHHHHhc
Confidence 79999999999999988765
No 365
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.57 E-value=1.2e-12 Score=112.19 Aligned_cols=301 Identities=17% Similarity=0.108 Sum_probs=179.0
Q ss_pred hhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcC------CC--CeEEecCCCCCChh-hhhhhccCcEEEEEeCCC
Q 019899 3 GFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLAD------HG--NALLVPSPYYPGFD-RDIRFRTGVELIPVHCRS 73 (334)
Q Consensus 3 ~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~------~g--d~vl~~~p~~~~~~-~~~~~~~g~~v~~v~~~~ 73 (334)
+.+.+..++. .++.|++.+++|+|+..++....+ +- .+|+....+|.+-. ..+. ..+..-+..|.++
T Consensus 105 ~~l~~~~~~~---~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals-~~~~s~y~~~~~p 180 (433)
T KOG1401|consen 105 EVLSAVLGKG---SAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALS-VTGNSKYGLPFDP 180 (433)
T ss_pred HHHHhcccCC---CccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHH-hhcccccCCCCCC
Confidence 3344444433 678999999999999998765421 11 24777777776533 3333 3333333332210
Q ss_pred ---C--CCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEEEEeccccccccCCC
Q 019899 74 ---T--DNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHVISDEIYGGSIFGNE 147 (334)
Q Consensus 74 ---~--~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~ 147 (334)
+ ...-.|++.+++.++.+ .+.+.++|+...+...|++. +.+=+..|...|+++|+++|.||++.+|...|.
T Consensus 181 ~~p~v~~~~ynd~t~l~k~~~~h---~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~ 257 (433)
T KOG1401|consen 181 IAPDVVTAEYNDSTALEKLFESH---KGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGY 257 (433)
T ss_pred CCCceeecccCCHHHHHHHHHhC---CCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccch
Confidence 0 00123789999999874 22467777765587788755 455589999999999999999999988766554
Q ss_pred CcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh-----hcccCCChHHHHHHHHhhCChH
Q 019899 148 EFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL-----TRFCSISAPTQRLLISMLSDTK 222 (334)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~ 222 (334)
. ...+.. +..-.+.++.|.++ .|+++|..++ ++++.+.+..- ...|+.|+++..+....++...
T Consensus 258 ~--~a~e~~-------~~~PDI~t~aK~L~-gGlPigA~~v-~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~ 326 (433)
T KOG1401|consen 258 G--WAQEYF-------GVTPDITTVAKPLG-GGLPIGATGV-RDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELK 326 (433)
T ss_pred H--HHHHHh-------CcCCcceeehhhcc-CCceeEEEee-hHHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHc
Confidence 3 222222 12223567899998 8999999998 88998888643 3457788888888777775422
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccC-CCceeEEeeecCCcCCCC--ChhhHHHHHHHHHHh---cCeEEcCC
Q 019899 223 FIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSE-SSAGLYCWADMSGLIPSY--SEKGELELWDKLLNI---AKINVTPG 296 (334)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~-~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~ll~~---~gi~v~~g 296 (334)
. .+++.+..++-+..++.+.+.+.+.+-.+.. -..++++.+.+..+.... .......+...+.+. .|+.+.|
T Consensus 327 ~-~e~~k~vs~~~k~L~~~l~e~~~~~~~~i~g~~grgl~ig~~~~~p~~~~~d~~~~~~ll~~~~~~~~~~~gv~i~P- 404 (433)
T KOG1401|consen 327 D-PETLKNVSKIGKELRKLLDEYLKKTPNSICGGVGRGLVIGFEFEGPVYKFADAAREQGLLILTLGKGLLEEGVRIAP- 404 (433)
T ss_pred C-HHHHHHHHHHHHHHHHHHHHHhccCCCceeeeeeeEEEEEEEEeechhhhhhhhhhhhHHHHHHhcccccceEEEec-
Confidence 1 3444555556666666666666554222222 223455544443332211 001111122221111 2444444
Q ss_pred CCcCCCCCCeEEEEecCCCcccHHHHHHHHHHHHHHc
Q 019899 297 SACHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 297 ~~~~~~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
. ++ +++. .++|.++++++.+.+.+++.
T Consensus 405 ~--------~~-l~~~-~~~E~i~~~l~i~~~~l~~~ 431 (433)
T KOG1401|consen 405 I--------YL-LTVE-HTPEVIQRLLTILEKVLSAL 431 (433)
T ss_pred c--------cc-cccc-CcHHHHHHHHHHHHHHHHHh
Confidence 0 00 1222 46899999999999888763
No 366
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.56 E-value=8.8e-13 Score=129.00 Aligned_cols=271 Identities=15% Similarity=0.170 Sum_probs=177.4
Q ss_pred hhhcCCCCCCCCcEEEecCcHHHHHHHHHHh-cCC--CCeEEecCCCCCChhhhhhh---ccCcEEEEEeCCCCCCcccc
Q 019899 7 QVLGQAVSFDPSQIVLTAGATPAVEILCFCL-ADH--GNALLVPSPYYPGFDRDIRF---RTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 7 ~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l-~~~--gd~vl~~~p~~~~~~~~~~~---~~g~~v~~v~~~~~~~~~~~ 80 (334)
..++...+++..++-+..++|++.+.++.++ .++ +++|++++.+|+.....++. ..|.+++.++... +
T Consensus 128 t~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~------d 201 (954)
T PRK05367 128 TMVADLTGLEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAK------A 201 (954)
T ss_pred HHHHHHHCCChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCcc------C
Confidence 3455567789999999999999999888876 344 48999999999998876541 4799999998632 1
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++ + .++.++++.+| |.+|.+.| +++|+++|+++|+++++|.....+.. ..+ ..
T Consensus 202 ~~-------~-----~~~~~vlvq~p-~~~G~i~d---~~~i~~~ah~~Gal~~vda~~~Al~~----l~~---pg---- 254 (954)
T PRK05367 202 LD-------H-----DDVFGVLLQYP-GTSGEVRD---YTALIAAAHARGALVAVAADLLALTL----LTP---PG---- 254 (954)
T ss_pred CC-------c-----ccEEEEEEecC-CCCeeecc---HHHHHHHHHHcCCEEEEEehhhhccC----CCC---hh----
Confidence 11 1 14555666665 57899998 99999999999999999975422111 111 11
Q ss_pred cCCCcEEEEecccccC---CCCCceEEEEeecCHHHHHHHHH-hhc-------------------------ccCCChHHH
Q 019899 161 VDKDRVHIIYGLSKDL---SLPGFRTGVIYSYNESVLAAAKK-LTR-------------------------FCSISAPTQ 211 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~---~~~g~r~g~i~~~~~~~~~~~~~-~~~-------------------------~~~~~~~~~ 211 (334)
+.+.++++++.+|+. |..|...|++.+ ++++.+.+.- .-. ..+.|..+.
T Consensus 255 -e~GaDi~vgs~qkfg~P~g~GGP~aGflav-r~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~ 332 (954)
T PRK05367 255 -EMGADIAVGSAQRFGVPMGFGGPHAAYFAV-RDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTA 332 (954)
T ss_pred -hcCCCEEEeeCcccCCCCCCCCCCEEEEEE-CHHHHhhCCCCeeeeecccCCCcccccccccccccccccccccccchH
Confidence 168889999999972 123345899998 6666555421 000 011122122
Q ss_pred HHHHHhhCC--hH-HHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHh
Q 019899 212 RLLISMLSD--TK-FIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNI 288 (334)
Q Consensus 212 ~~~~~~l~~--~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 288 (334)
.++...+.. .. +...-+.+..++...+.+++.+.|+..|+++..+.-.-.+.++++. +..++.++|+ +
T Consensus 333 qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G~~~~~~~~f~~~~~~~~~--------~~~~i~~~l~-~ 403 (954)
T PRK05367 333 QVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALGLEVVHDSFFDTLTVEVGG--------DAAAVLARAL-A 403 (954)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCCeEEEeCCC--------CHHHHHHHHH-H
Confidence 222222211 01 1234467778888999999999998888886543211112233321 3467888854 5
Q ss_pred cCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHH
Q 019899 289 AKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQ 327 (334)
Q Consensus 289 ~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~ 327 (334)
+||.+..- .++.+|+|+.. .|++||+.+++.+.
T Consensus 404 ~gi~~~~~------~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 404 AGINLRRV------DDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred CCceeccc------cCCEEEEEecccCCHHHHHHHHHHHc
Confidence 89988321 14579999996 58999999999996
No 367
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.56 E-value=1.9e-12 Score=118.01 Aligned_cols=278 Identities=15% Similarity=0.138 Sum_probs=156.5
Q ss_pred CCCcEEEecCcHHHHHHHHHHhc----------C----CCCeEEecCCCCCChhhhhhhccCcE-EE----------EEe
Q 019899 16 DPSQIVLTAGATPAVEILCFCLA----------D----HGNALLVPSPYYPGFDRDIRFRTGVE-LI----------PVH 70 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l~----------~----~gd~vl~~~p~~~~~~~~~~~~~g~~-v~----------~v~ 70 (334)
..+.+++++++++|+..++.... . ++.+|+....+|.+......-..|.. .. .++
T Consensus 102 ~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~ 181 (431)
T TIGR03251 102 ALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRID 181 (431)
T ss_pred CcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCC
Confidence 34689999999999999887652 1 13678888888876543322022311 10 011
Q ss_pred CCC------CCCc-------cccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccC-CCHHHHHHHHHHHHhcCcEEEEe
Q 019899 71 CRS------TDNF-------AFSITALDQAFNQARKRGVKVRGILICNPANPVGNI-IPRETLYELLDFAREKNIHVISD 136 (334)
Q Consensus 71 ~~~------~~~~-------~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~vi~D 136 (334)
.++ .... .-+++++++.+.. ...++.++++...+...|.+ .+.+.+++|.++|++||+++|+|
T Consensus 182 ~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~D 258 (431)
T TIGR03251 182 NPKLTFPLDAPNLDQVIALEEEALRQARAAFAE---RPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFD 258 (431)
T ss_pred CCcccCCccccccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 100 0000 0123344444442 23467777776557777876 46678999999999999999999
Q ss_pred ccccccccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCH--HHHHH-HH---HhhcccCCChHH
Q 019899 137 EIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNE--SVLAA-AK---KLTRFCSISAPT 210 (334)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~--~~~~~-~~---~~~~~~~~~~~~ 210 (334)
|++.++...|..+. .... +..++ + .+++|.+. . .|++.. ++ ++... +. .....++.+++.
T Consensus 259 EV~tG~GrtG~~~a-~~~~----gv~PD--i--~~~gK~~~-~---~g~~~~-~~i~~~~~~~~~~~~~~~~T~~gnpl~ 324 (431)
T TIGR03251 259 EVQTGVGLTGTAWA-YQQL----GVQPD--I--VAFGKKTQ-V---CGIMAG-RRVDEVADNVFAVPSRLNSTWGGNLVD 324 (431)
T ss_pred cchhccCccchHHH-HHhc----CCCCC--E--EEecccCc-c---ceEEec-chHHHhhhhcccCccccCCCCCCCHHH
Confidence 99997655443211 1111 11122 2 24788862 2 255543 32 22211 11 123446677777
Q ss_pred HHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHh----CC-CcccCCCceeEEeeecCCcCCCCChhhHHHHHHHH
Q 019899 211 QRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQ----LG-IRCSESSAGLYCWADMSGLIPSYSEKGELELWDKL 285 (334)
Q Consensus 211 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (334)
..++.+.++..+ ++ ...++++++-+++.+.|++ .+ +.......|.++.++++.. .....+...+
T Consensus 325 ~aaa~a~L~~l~--~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~~------~~~~~~~~~l 393 (431)
T TIGR03251 325 MVRATRILEIIE--EE---RLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPST------ADRDEVIRQL 393 (431)
T ss_pred HHHHHHHHHHHH--hc---CHHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCCH------HHHHHHHHHH
Confidence 777777665321 11 1222333444444444433 22 2211222356666777532 1234577775
Q ss_pred HHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHH
Q 019899 286 LNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQK 328 (334)
Q Consensus 286 l~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~ 328 (334)
+ ++||.+.|.. .+.+|++++. .+++|++++++++.+
T Consensus 394 ~-~~Gvl~~~~g------~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 394 Y-REGVLLLGCG------ERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred H-hCCeEEecCC------CCeEEEECCccCCHHHHHHHHHHHHh
Confidence 5 5899997643 2568988774 699999999999876
No 368
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.52 E-value=2.6e-13 Score=115.16 Aligned_cols=291 Identities=16% Similarity=0.172 Sum_probs=187.4
Q ss_pred CCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHH----
Q 019899 17 PSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQAR---- 92 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~---- 92 (334)
.++-++-+.+..++..++.+++++||.+.+++-...+....++ ...-.++++. +.|+++++..+.+..
T Consensus 154 ~E~aivYs~gF~ti~S~ipafsKrGDIi~~de~~nfaIq~Glq-lSRS~i~~Fk-------hndm~~lerll~E~~~~~~ 225 (467)
T KOG1358|consen 154 TEDAIVYSYGFSTIESAIPAFSKRGDIIFVDEAVNFAIQKGLQ-LSRSTISYFK-------HNDMEDLERLLPEQEDEDQ 225 (467)
T ss_pred CcceeeeccccchhhhcchhhhccCcEEEEehhhhHHHHHHHh-hhhheeEEec-------CCCHHHHHHhccCcchhhh
Confidence 3445555666779999999999999999999999988888888 7777777776 357888877653221
Q ss_pred HcC--CceeEEEEeCC-CCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccC--CCCcchhhhhhhccccCCCcEE
Q 019899 93 KRG--VKVRGILICNP-ANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFG--NEEFVSMAEILEAEEVDKDRVH 167 (334)
Q Consensus 93 ~~~--~~~~~i~~~~p-~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 167 (334)
++- ..++-.++... .-++|.+.+ +.+|.++..+|...||.||.|+....+ |.+...+..... .+.++
T Consensus 226 K~~k~~~~Rrfiv~EGl~~N~g~i~p---l~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~-----~~iDi 297 (467)
T KOG1358|consen 226 KNPKKALTRRFIVVEGLYANTGDICP---LPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPI-----TDIDI 297 (467)
T ss_pred hccccccceEEEEEEeeccCCCcccc---cHHHHHHHhhheEEEEEecccccccccccCccccccCCCCc-----cceee
Confidence 111 12354566655 568999999 999999999999999999999886654 455556665543 56778
Q ss_pred EEecccccCCCCCceEEEEeecCHHH--HHHHHHhhcccCCChHH--HHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHH
Q 019899 168 IIYGLSKDLSLPGFRTGVIYSYNESV--LAAAKKLTRFCSISAPT--QRLLISMLSDTKFIQEYLETNKRRIKKLYDSFV 243 (334)
Q Consensus 168 ~~~s~sK~~~~~g~r~g~i~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (334)
+++|+.-+++..| |++.+ +.-+ .+++......++.+.+. ..++...+.- .++-....+.++.....+.
T Consensus 298 v~~sm~~alas~G---gFc~G-~~~i~~hQrLSg~~Y~fSAslPp~la~aa~~ai~i----~~~~p~~~~~L~~k~~~~H 369 (467)
T KOG1358|consen 298 VTASMETALASGG---GFCAG-KSFIADHQRLSGSGYCFSASLPPYLAGAAIKAILI----EEWNPEIVQPLRAKVAKFH 369 (467)
T ss_pred eeecccccccccC---ceeec-ceeeEeeeeccccceeeeccCchhhhhhHHHHHHH----HhhCcchhhhhhccccccc
Confidence 8889988887444 66665 4332 34444444445444333 3333333322 2222334455666666666
Q ss_pred HHHHhC-CCcccCCCceeEEeeecCCcCCCC--ChhhHHHHHHHHHHhcCeEEcCCCCcCC----CCCCeEEEEecC-CC
Q 019899 244 AGLKQL-GIRCSESSAGLYCWADMSGLIPSY--SEKGELELWDKLLNIAKINVTPGSACHC----IEPGWFRCCFTS-LT 315 (334)
Q Consensus 244 ~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~~~iRi~~~~-~~ 315 (334)
..|... ++.+....-.....+.+.+...+. ...--.++++..+.+ ++.+....+.-. .-+..+|+++.. .+
T Consensus 370 ~~l~~~s~~~v~~~~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~-~~ll~~a~~~~~~e~~~~~pSiri~~~a~~s 448 (467)
T KOG1358|consen 370 AALSSNSGFIVSGSPESPIIHLQLERSYGSREKEEKLLEEIVDKCIAE-GVLLTRAKYLEKLERCPIPPSIRICVSAGMS 448 (467)
T ss_pred hhhhcCCceEEecCcCCceeeeeecccccchHHHHHHHHHHHHHHHhh-cceehhhhhhhhcccCCCCCcEEEEEeCCCC
Confidence 666654 566665544444555555432211 111224566666665 777654333210 113479999985 79
Q ss_pred cccHHHHHHHHHHHHHH
Q 019899 316 HEDIPLVIERIQKVAET 332 (334)
Q Consensus 316 ~~~l~~~l~~l~~~~~~ 332 (334)
+++++++.+.+++....
T Consensus 449 eeel~ra~~~ik~~~~~ 465 (467)
T KOG1358|consen 449 EEELERAAELIKEVASA 465 (467)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999987654
No 369
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.50 E-value=3.6e-12 Score=118.80 Aligned_cols=219 Identities=13% Similarity=0.124 Sum_probs=142.1
Q ss_pred eEEecCCCCCChhhhhhhccCc---EEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHH
Q 019899 43 ALLVPSPYYPGFDRDIRFRTGV---ELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETL 119 (334)
Q Consensus 43 ~vl~~~p~~~~~~~~~~~~~g~---~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l 119 (334)
+++++...|+++..++. .+|. .++.||+ ++++.+|++.|+++|++...++..+-+|+.+.+++.+|.+-|.+++
T Consensus 224 ~vl~s~~aHyS~~KAa~-ilGlG~~~vv~Vpv--D~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI 300 (608)
T TIGR03811 224 KWLVPQTKHYSWLKAAD-IIGIGLDQVIPVPV--DSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKI 300 (608)
T ss_pred EEEECCCccHHHHHHHH-HcCCCcccEEEeec--CCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHH
Confidence 68888888999999998 8887 5899998 4667899999999999877777677778888889999999995555
Q ss_pred HHHHHHHHhcCc--EEEEeccccccc---cCCC--Ccc------------------------hhhhhhhccccCCCcEEE
Q 019899 120 YELLDFAREKNI--HVISDEIYGGSI---FGNE--EFV------------------------SMAEILEAEEVDKDRVHI 168 (334)
Q Consensus 120 ~~i~~~~~~~~~--~vi~D~~~~~~~---~~~~--~~~------------------------~~~~~~~~~~~~~~~~~~ 168 (334)
.+|++.++++|+ |+++|.+|+++. +-.. .+. ....... ++ ...+-+
T Consensus 301 ~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~--gl-e~ADSI 377 (608)
T TIGR03811 301 VALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYK--AI-SEAESV 377 (608)
T ss_pred HHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHh--cC-cCceEE
Confidence 555555578898 699999999853 1110 000 0111111 22 233344
Q ss_pred EecccccCCCCCceEEEEeecCHHHHHHHHHhhccc----------------CCChHHHHHHHHhhC--ChHHHHHHHHH
Q 019899 169 IYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFC----------------SISAPTQRLLISMLS--DTKFIQEYLET 230 (334)
Q Consensus 169 ~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~l~--~~~~~~~~~~~ 230 (334)
...+||++. .....|.++.+++.+.+.+.....+. ..+.+...++..++. ....-.+.+.+
T Consensus 378 tvDpHK~g~-~Py~~G~ll~Rd~~~~~~~~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~ 456 (608)
T TIGR03811 378 TIDPHKMGY-IPYSAGGIVIQDIRMRDVISYFATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGK 456 (608)
T ss_pred EeCcccccc-cCCCeEEEEEeCHHHHHHHhcCcchhccccccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHH
Confidence 558999875 66789999888887766554322111 112222222332222 11001345577
Q ss_pred HHHHHHHHHHHHHHHHHhCC-------Ccc---cCCCceeEEeeecCC
Q 019899 231 NKRRIKKLYDSFVAGLKQLG-------IRC---SESSAGLYCWADMSG 268 (334)
Q Consensus 231 ~~~~~~~~~~~~~~~l~~~g-------~~~---~~~~~g~~~~~~~~~ 268 (334)
+.++..+.++++.+.|++++ +++ ..|+-+..+|.-.|+
T Consensus 457 ~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~~~~pdlniV~Fr~~~~ 504 (608)
T TIGR03811 457 LIGASIEGAHRFYDFLNNLEFKVGDKEIEVHPLTKPDFNMVDYVFNEK 504 (608)
T ss_pred HHHHHHHHHHHHHHHHHhcccccCCCCeeEEecCCCCcceEEEEEecC
Confidence 78888888999999998743 343 345556555443333
No 370
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.46 E-value=4.2e-11 Score=100.95 Aligned_cols=303 Identities=17% Similarity=0.192 Sum_probs=196.1
Q ss_pred CcEEEecCcHHHHHHHHHHhcCCC-----CeEEecCCCCCChhhhhhhccCcEEEEEeCCCC--------CCccccHHHH
Q 019899 18 SQIVLTAGATPAVEILCFCLADHG-----NALLVPSPYYPGFDRDIRFRTGVELIPVHCRST--------DNFAFSITAL 84 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l~~~g-----d~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~--------~~~~~~~~~l 84 (334)
..++.|..+..|-++++..+.+++ .+.++++..|.-..+.-....|..++-++++.. -...+|++.|
T Consensus 95 q~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kL 174 (471)
T COG3033 95 QYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKL 174 (471)
T ss_pred eeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHHhcCCccccccccccccccccCCCCCccCHHHH
Confidence 678899999999999999887654 344555555554444333267877777765332 2246899999
Q ss_pred HHHHHHHHHcCCceeEEEEeCC-CCCcccCCCHHHHHHHHHHHHhcCcEEEEecc-cccccc------CCCCcchhhhhh
Q 019899 85 DQAFNQARKRGVKVRGILICNP-ANPVGNIIPRETLYELLDFAREKNIHVISDEI-YGGSIF------GNEEFVSMAEIL 156 (334)
Q Consensus 85 ~~~l~~~~~~~~~~~~i~~~~p-~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~-~~~~~~------~~~~~~~~~~~~ 156 (334)
++.|++.... ++-.|+++.. |...|+..|.+.++++.++|++|+++++.|.+ |....| ++-...++.++.
T Consensus 175 e~lidevG~~--nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~Ia 252 (471)
T COG3033 175 ERLIDEVGAD--NVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIA 252 (471)
T ss_pred HHHHHHhCcc--cCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHH
Confidence 9999986332 2334444444 44889999999999999999999999999987 333322 122234455544
Q ss_pred hc-cccCCCcEEEEecccccCCCCCceEEEEeecCHH---HHHHHHHh-------hcccCCChHHHHHHHHhhCChHHHH
Q 019899 157 EA-EEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNES---VLAAAKKL-------TRFCSISAPTQRLLISMLSDTKFIQ 225 (334)
Q Consensus 157 ~~-~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~---~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~~~~~~ 225 (334)
.+ ..+ ..-+. -|.-|- |+..+ .|++..+++. +-..++.. .++++.+.-.+.+++.-|.+.-. .
T Consensus 253 rEm~sY--aD~~~-mS~KKD-~lvnm-GGfl~~~D~~~fDvy~~~~~~~V~~eG~~tYGgl~GrdmealAvGL~e~~~-~ 326 (471)
T COG3033 253 REMYSY--ADGCT-MSAKKD-GLVNM-GGFLCFKDDSFFDVYEECRTLVVVQEGFPTYGGLAGRDMEALAVGLREGVN-F 326 (471)
T ss_pred HHHHhh--hhhhe-eecccc-ceecc-ccEEEecCccHHHHHHHHHhheEeeccccccCcccchhHHHHHHHHHHhcC-c
Confidence 43 111 11122 244442 22321 2566665653 55555442 34456666677777666654211 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCC--CChhhHHHHHHHHHHhcCeEEcCCCCcCCC-
Q 019899 226 EYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPS--YSEKGELELWDKLLNIAKINVTPGSACHCI- 302 (334)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~- 302 (334)
+|++.+.+++ +++.+.|++.|+++..|.+|.-++++..+..+. .....+..++-.|.++.||...-...+...
T Consensus 327 ~yl~~Rv~Qv----~YL~~~l~~~GVpi~~paGGHavfvda~~~lphip~eqFpaqala~ely~e~GiRavElG~~~~~r 402 (471)
T COG3033 327 DYLAHRVAQV----QYLADGLEEAGVPIVQPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGR 402 (471)
T ss_pred HHHHHHHHHH----HHHHHHHHhcCCeeEecCCCceEEeehhhhcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceeccc
Confidence 4555554444 799999999999999999999999987654432 233466788899999999976543322211
Q ss_pred ----------CCCeEEEEecC--CCcccHHHHHHHHHHHHHH
Q 019899 303 ----------EPGWFRCCFTS--LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 303 ----------~~~~iRi~~~~--~~~~~l~~~l~~l~~~~~~ 332 (334)
.-.-+|+.+.. .|.+.++..++.++++.+.
T Consensus 403 d~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~ 444 (471)
T COG3033 403 DPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKEN 444 (471)
T ss_pred CCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHhc
Confidence 11458999884 4899999999999988764
No 371
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=99.43 E-value=6.9e-11 Score=97.31 Aligned_cols=295 Identities=13% Similarity=0.157 Sum_probs=185.8
Q ss_pred CCcEEEecCcHHHHHHHHHHh---cCCCCeEEecCCCCCChhhh-hhhc------cC---cEEEEEe---CCCC------
Q 019899 17 PSQIVLTAGATPAVEILCFCL---ADHGNALLVPSPYYPGFDRD-IRFR------TG---VELIPVH---CRST------ 74 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l---~~~gd~vl~~~p~~~~~~~~-~~~~------~g---~~v~~v~---~~~~------ 74 (334)
-+-+++++++++|+.++++.. .+..|.|.++ ..|.++... ++ . .| .++.+|. +++-
T Consensus 102 Lsvc~F~NSGSEANDLALRLAR~ftkhqDvItld-HAYHGHl~s~mE-~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r 179 (452)
T KOG1403|consen 102 LSVCFFVNSGSEANDLALRLARNFTKHQDVITLD-HAYHGHLQSVME-VSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFR 179 (452)
T ss_pred ceEEEEecCCchhhHHHHHHHHhhcccCceEEEe-chhccceeeeee-ccceeccCCCCcCCCceeEecCCccccccccc
Confidence 567999999999999998764 4566755554 455544432 22 1 12 1222222 2111
Q ss_pred -------CCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHH-HHHHHHHHHHhcCcEEEEeccccccccCC
Q 019899 75 -------DNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRE-TLYELLDFAREKNIHVISDEIYGGSIFGN 146 (334)
Q Consensus 75 -------~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~-~l~~i~~~~~~~~~~vi~D~~~~~~~~~~ 146 (334)
+....=.+.+++.+++..+.|-++.+.+..+-+.=.|+++|+. ..+++++..+.+|-..|.||++-+|..-|
T Consensus 180 ~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG 259 (452)
T KOG1403|consen 180 DKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVG 259 (452)
T ss_pred cccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccc
Confidence 1011224567778887777776777677666677778877665 58999999999999999999998765544
Q ss_pred CCcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHH----hhcccCCChHHHHHHHHhhCChH
Q 019899 147 EEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKK----LTRFCSISAPTQRLLISMLSDTK 222 (334)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~ 222 (334)
..+..+.- ++-+--+.++.|.+| .|-+++.+.. .+++.+.+.. +...++.|+.+.++..+.++..+
T Consensus 260 ~hyWafq~--------y~fiPDIVtmgKpmG-NGhPVa~Vat-tkeIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e 329 (452)
T KOG1403|consen 260 SHYWAFQT--------YNFIPDIVTMGKPMG-NGHPVAAVAT-TKEIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCE 329 (452)
T ss_pred hhhhhhhh--------hccccchheecccCC-CCCeeeEEec-cHHHHHHhccccceehhccCCCchhHHHHHHHHHHHh
Confidence 43333321 344445668999999 9999999998 8899888865 34456788888888777776433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC--CceeEEeeecCCcCCC--CChhhHHHHHHHHHHhcCeEEcCCCC
Q 019899 223 FIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSES--SAGLYCWADMSGLIPS--YSEKGELELWDKLLNIAKINVTPGSA 298 (334)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~--~~g~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~gi~v~~g~~ 298 (334)
.+.+.....++.+..+.+...++. ..++.+. ..|.|+-+++-+.... ...+.+.-+..+|.+.++|.+..-.
T Consensus 330 --~E~Lq~ha~~vG~~L~~lL~~~k~-kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDG- 405 (452)
T KOG1403|consen 330 --DENLQEHAQQVGEKLEVLLRRLKQ-KHECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADG- 405 (452)
T ss_pred --hhhHHHHHHHHHHHHHHHHHHHhh-hccceeccccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCC-
Confidence 233344444444444444444433 2334433 3466666666543221 2223344577887778889886422
Q ss_pred cCCCCCCeEEEEec-CCCcccHHHHHHHHHHHH
Q 019899 299 CHCIEPGWFRCCFT-SLTHEDIPLVIERIQKVA 330 (334)
Q Consensus 299 ~~~~~~~~iRi~~~-~~~~~~l~~~l~~l~~~~ 330 (334)
+ ..+.+.|-.. ..++++.++.+..|.+++
T Consensus 406 --P-h~NilKiKPPmCFneena~e~v~~ld~iL 435 (452)
T KOG1403|consen 406 --P-HRNILKIKPPMCFNEENADEFVLGLDEIL 435 (452)
T ss_pred --C-CCceeecCCCcccChhhHHHHHHHHHHHH
Confidence 1 2456666533 268999888888887776
No 372
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.42 E-value=7.9e-11 Score=101.82 Aligned_cols=296 Identities=15% Similarity=0.165 Sum_probs=178.4
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcH---HHHHHHHHHhcC----CCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCC
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGAT---PAVEILCFCLAD----HGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRST 74 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~---~~~~~~~~~l~~----~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~ 74 (334)
++||.+-.| .++-.+-..+|+. .++.++-..+-. ..+.+|+|+-.|+....++. ..|.+|+.|++ +
T Consensus 115 q~~L~~ITG----~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAa-m~G~~VV~V~~--~ 187 (496)
T COG1003 115 QEWLKEITG----MDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAA-MAGFKVVVVKC--D 187 (496)
T ss_pred HHHHHHhcC----CceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHh-hcCceEEEEec--C
Confidence 466666433 3444444444543 233333333322 34689999999999988888 99999999999 4
Q ss_pred CCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhh
Q 019899 75 DNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAE 154 (334)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~ 154 (334)
++..+|+++|++++.+ ++.++.+++|++ .|.. ++++++|+++.+++|-.|..|.+--. -+..
T Consensus 188 ~~G~VDlddLk~k~~~------~~AalMiTnPsT-~GvF--E~~I~ei~~ivH~~Gg~vY~DGANlN---------A~vG 249 (496)
T COG1003 188 ENGNVDLDDLRAKAED------NLAALMITNPST-LGVF--EEDIREICEIVHEAGGQVYYDGANLN---------AIVG 249 (496)
T ss_pred CCCCccHHHHHHHhcc------ceeEEEeccCcc-cccc--hhhHHHHHHHHHHcCCEEEecCcchh---------hhhc
Confidence 5568999999999986 899999999975 3333 56799999999999999999987322 1111
Q ss_pred hhhccccCCCcEEEEecccccCCCC----CceEEEEeecCHHHHHHHHH----------------------hhcccCCCh
Q 019899 155 ILEAEEVDKDRVHIIYGLSKDLSLP----GFRTGVIYSYNESVLAAAKK----------------------LTRFCSISA 208 (334)
Q Consensus 155 ~~~~~~~~~~~~~~~~s~sK~~~~~----g~r~g~i~~~~~~~~~~~~~----------------------~~~~~~~~~ 208 (334)
+... + +.+.++.=-.++|+|+.| |...|=|.. ...+...+-. ...+++..+
T Consensus 250 ~~rP-G-d~G~DV~HlNLHKTF~iPHGGGGPG~GPvgV-k~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~ 326 (496)
T COG1003 250 LARP-G-DMGFDVVHLNLHKTFCIPHGGGGPGAGPVGV-KAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSAS 326 (496)
T ss_pred cccc-c-ccccceEEeecccccccCCCCCCCCCCceeh-HhhccccCCCCcccCCCccccccCCCCccceeeccccCcch
Confidence 1110 1 145555555899999533 344555554 3444333321 011122222
Q ss_pred HHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCC--CceeEEeeecCCcCCCCChhhHHHHHHHH
Q 019899 209 PTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSES--SAGLYCWADMSGLIPSYSEKGELELWDKL 285 (334)
Q Consensus 209 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (334)
....+.+.+..-+ .+-+.+..+.---+++++..+|+.. .+.+... ...-++ ++..+. .........+++++|
T Consensus 327 il~~a~~YI~~mG---~~GL~~ase~AvLNANYia~rL~~~y~~~y~~~~~~~HE~i-ld~r~l-~~~~Gv~~~DvAKrL 401 (496)
T COG1003 327 ILPIAWAYIRMMG---ADGLKQASEVAVLNANYIARRLKGYYPVPYTGENRVAHECI-LDARPL-KKETGVRALDVAKRL 401 (496)
T ss_pred HHHHHHHHHHHHh---HHHHHHHHHHHHHhHHHHHHHhhhcCccccCCCCcceeEEE-eechHh-HhhcCCcHHHHHHHH
Confidence 2223333222221 3345555666667889999999873 2322222 122222 333211 112233557899997
Q ss_pred HHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 286 LNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 286 l~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
++ +|+-. |-.+|...-.+.+-|=... .+.+++|++++++.++.++
T Consensus 402 lD-~GfHa-PT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~E 447 (496)
T COG1003 402 LD-YGFHA-PTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREE 447 (496)
T ss_pred Hh-cCCCC-CcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHH
Confidence 76 89875 4555653334556665553 3677899999999888764
No 373
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.41 E-value=5.2e-11 Score=104.53 Aligned_cols=266 Identities=12% Similarity=0.093 Sum_probs=165.9
Q ss_pred cEEE-ecCcHHHHHHHHHHhcCCCCeEE--ecCCCCCC-hhhhhhhccCcEEEEEeCCC--CCCccccHHHHHHHHHHHH
Q 019899 19 QIVL-TAGATPAVEILCFCLADHGNALL--VPSPYYPG-FDRDIRFRTGVELIPVHCRS--TDNFAFSITALDQAFNQAR 92 (334)
Q Consensus 19 ~i~~-~~g~~~~~~~~~~~l~~~gd~vl--~~~p~~~~-~~~~~~~~~g~~v~~v~~~~--~~~~~~~~~~l~~~l~~~~ 92 (334)
+|++ ..|+|.++.++...++++||+++ +.+..|.. ..+.++ .+| ++..+.... +.+..++.++++ +.
T Consensus 69 ~Vlfl~GggT~~~ea~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~-~~g-~v~~~~~~~~~~~~~~p~~~~~~--~~--- 141 (364)
T PRK12462 69 GVVFLQGGSSLQFSMIPMNFSRPGAAAPEYVTTGYWSRKAIGEAS-RVA-AMRVVWDGAASGYRTLPSLAELD--WD--- 141 (364)
T ss_pred eEEEEeccHHHHHHHHHHHcCCCCCcEEEEEeCCHHHHHHHHHHH-hcC-CceEecCcCCCCCCcCCCHHHhc--cC---
Confidence 4555 45589999999999999999665 44444432 223344 456 444443211 122334555541 11
Q ss_pred HcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEecc
Q 019899 93 KRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGL 172 (334)
Q Consensus 93 ~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 172 (334)
.+.+.+.+++..+.||+.++ ++.+.++.++|+|.+-+.+. ....+.. + +++..+.
T Consensus 142 ---~d~~~v~~t~NETstGv~~~--------~~~~~~~~llvvD~sS~~~s----~pid~~~--------~--dvi~ags 196 (364)
T PRK12462 142 ---ARAPFRHYVSNETVEGLQFP--------DAAGLPDSPLIADMSSDFMS----RPFDVEA--------Y--GMVYAHA 196 (364)
T ss_pred ---CCCcEEEEccCCCCceEecC--------cccccCCCeEEEEcCchhhC----CCCChHH--------c--cEEEeec
Confidence 15677888888889999997 22233689999998855321 2233322 2 4667788
Q ss_pred cccCCCCCceEEEEeecCHHHHHHHHHh--------------hcccCCChHHHHHHHHhhCChHHH-HH--HHHHHHHHH
Q 019899 173 SKDLSLPGFRTGVIYSYNESVLAAAKKL--------------TRFCSISAPTQRLLISMLSDTKFI-QE--YLETNKRRI 235 (334)
Q Consensus 173 sK~~~~~g~r~g~i~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~l~~~~~~-~~--~~~~~~~~~ 235 (334)
.|.+|.+| ++.++. +++.+++.... +.+.+++....+++...++ |+ ++ -++.+.++.
T Consensus 197 QKnlgP~G--ltvviv-s~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~---~i~~e~GGl~~~~~r~ 270 (364)
T PRK12462 197 QKNLGPAG--VTVAII-RRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLR---WIRDEIGGVHAMRDIN 270 (364)
T ss_pred cccCCCCc--eEEEEE-CHHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHH---HHHHhccCHHHHHHHH
Confidence 99999776 677777 66665544321 1122444455555555543 33 33 467888889
Q ss_pred HHHHHHHHHHHHhCC-Cccc----CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEE
Q 019899 236 KKLYDSFVAGLKQLG-IRCS----ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCC 310 (334)
Q Consensus 236 ~~~~~~~~~~l~~~g-~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~ 310 (334)
+++++.+++.+.... +... ....-+-+.++++.. ....++... ++++|+.-.-|+.- -+.+|+|
T Consensus 271 ~~ka~~ly~~id~~~~~~~~~~~~~~RS~mnv~f~~~~~------~l~~~f~~~-a~~~gl~~lkGhr~----vgg~Ras 339 (364)
T PRK12462 271 ARKAAMLYATLDALNEVIDCHAHRAARSTMNVAFRFRQP------RLDTLFKEQ-STEAGFCGLSGHRS----IGGIRAS 339 (364)
T ss_pred HHHHHHHHHHHHhCCCcccCCCChhhcCcceEEEEcCCH------HHHHHHHHH-HHHCCCccccCCcc----cCceEEE
Confidence 999999999998874 4322 122334444555432 223456666 77789987666642 3569999
Q ss_pred ecC-CCcccHHHHHHHHHHHHHHc
Q 019899 311 FTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 311 ~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
+-+ .+.++++.+++-++++-+++
T Consensus 340 ~yna~~~e~v~~L~~fm~~f~~~~ 363 (364)
T PRK12462 340 LYNAVSEQAVSRLCAFLKDFAIRH 363 (364)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHhc
Confidence 875 79999999999999887765
No 374
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.38 E-value=5.3e-12 Score=111.45 Aligned_cols=215 Identities=18% Similarity=0.169 Sum_probs=129.3
Q ss_pred CCCcEEEecCcHHHHHHHHHHhc--------CCCCeEEecCCCCCChhhhhhhc------------cCcEEEEEeCCCCC
Q 019899 16 DPSQIVLTAGATPAVEILCFCLA--------DHGNALLVPSPYYPGFDRDIRFR------------TGVELIPVHCRSTD 75 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l~--------~~gd~vl~~~p~~~~~~~~~~~~------------~g~~v~~v~~~~~~ 75 (334)
..+.+++++++++|+..++.... ....+|+....+|.+......-. ....+..+|.++..
T Consensus 75 ~~~~v~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~ 154 (339)
T PF00202_consen 75 GLDRVFFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPA 154 (339)
T ss_dssp TEEEEEEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHH
T ss_pred ccceeeeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccc
Confidence 56799999999999999987655 24468998888887643211101 11234666653211
Q ss_pred C---ccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcch
Q 019899 76 N---FAFSITALDQAFNQARKRGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVS 151 (334)
Q Consensus 76 ~---~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~ 151 (334)
. ..-..+.+++.+.+.. .+++.++++...+...|... +.+.+++|.++|++||+++|+||++.++...|..+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~--~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a- 231 (339)
T PF00202_consen 155 ADEEEQACLNALEELIAALN--ADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFA- 231 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--GGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSG-
T ss_pred hhhhHHHHHHHHHHHHHhhc--CCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCccc-
Confidence 1 0112223444433321 23666566554466667655 566799999999999999999999998866665432
Q ss_pred hhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHH--hhcccCCChHHHHHHHHhhCChHHHHHHHH
Q 019899 152 MAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKK--LTRFCSISAPTQRLLISMLSDTKFIQEYLE 229 (334)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 229 (334)
..... .++ +++ +++|.++ .|+++|.++. ++++.+.+.. +..+++.++.+..++.+.++..+ + .
T Consensus 232 ~~~~g----v~P--Div--~~gK~l~-gG~p~sav~~-~~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~---~--~ 296 (339)
T PF00202_consen 232 SEHYG----VDP--DIV--TFGKGLG-GGLPISAVLG-SEEIMEAFQPGSHGSTFGGNPLSCAAALATLEILE---E--E 296 (339)
T ss_dssp HHHHT----SSS--SEE--EEEGGGG-TTSSEEEEEE-EHHHHTTSCTTSSTCTTTT-HHHHHHHHHHHHHHH---H--T
T ss_pred eeccc----ccC--ccc--ccccchh-hhhhcccccc-cchhhccccccccccccccchHhhhhhhhHHHhhc---c--H
Confidence 22221 112 333 4679998 7899999998 8888777643 34556678888887777775432 1 1
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 019899 230 TNKRRIKKLYDSFVAGLKQ 248 (334)
Q Consensus 230 ~~~~~~~~~~~~~~~~l~~ 248 (334)
...+++.++-+++.+.|++
T Consensus 297 ~~~~~~~~~g~~l~~~L~~ 315 (339)
T PF00202_consen 297 DLLERVRELGERLREGLRE 315 (339)
T ss_dssp THHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 2233444444455554443
No 375
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=99.37 E-value=2.1e-10 Score=98.80 Aligned_cols=308 Identities=13% Similarity=0.207 Sum_probs=184.0
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcC-------CC-----CeEEec-CCCCCChhhhhhhccC---cEEEE
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLAD-------HG-----NALLVP-SPYYPGFDRDIRFRTG---VELIP 68 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~-------~g-----d~vl~~-~p~~~~~~~~~~~~~g---~~v~~ 68 (334)
+++.++ |....|.|+--.|+.+.+.++..+-.+ .| +-|+.+ +.+|+++..++. .+| -+++.
T Consensus 150 m~~ivG--w~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa-~lg~gtd~c~~ 226 (510)
T KOG0629|consen 150 MREIVG--WEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAA-FLGLGTDHCIK 226 (510)
T ss_pred HHHHhC--CCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHH-HhccCCceeEE
Confidence 455556 444445665555555555555444211 11 345544 578999999888 777 66778
Q ss_pred EeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCC
Q 019899 69 VHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEE 148 (334)
Q Consensus 69 v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~ 148 (334)
|+. +...++.+++|++.|-..+..|..|-.+-.+..++.-|..-| +..++++|.+|++|+++|.+|++...=+..
T Consensus 227 v~t--~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDd---L~~iadiC~k~~lWmHvDAAwGGglLmS~k 301 (510)
T KOG0629|consen 227 VKT--DERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDD---LNGIADICEKHKLWMHVDAAWGGGLLMSRK 301 (510)
T ss_pred ecc--cccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCc---HHHHHHHHHhcCEEEEeecccccccccChh
Confidence 887 455689999999999887766666665656656778888888 999999999999999999999873321111
Q ss_pred cchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc--------cCCC-----hHHHH---
Q 019899 149 FVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--------CSIS-----APTQR--- 212 (334)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--------~~~~-----~~~~~--- 212 (334)
...... +.+.-+ -+..+.+|.+| .++.++..+.+.+.+.+.+...... +.+| -..|-
T Consensus 302 ~R~kl~-----Giera~-SvtwnpHK~~g-aplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh 374 (510)
T KOG0629|consen 302 HRHKLT-----GIERAN-SVTWNPHKLMG-APLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRH 374 (510)
T ss_pred hHhhcc-----CccccC-ceeecHHHhhc-CcchhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcCcc
Confidence 111111 111111 23458899998 7788888888666676666433211 1111 01111
Q ss_pred --HHHHhh---CChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCccc---CCC-ceeEEeeecCCcCCC-CCh------
Q 019899 213 --LLISML---SDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCS---ESS-AGLYCWADMSGLIPS-YSE------ 275 (334)
Q Consensus 213 --~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~---~~~-~g~~~~~~~~~~~~~-~~~------ 275 (334)
+..-++ +.+ .+.+++..+.+.++++++..+|++. ++... .|+ .++..|...+..-.. ...
T Consensus 375 ~D~FKlWlmwkaKG---~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~~lR~~~~~~e~~~rL 451 (510)
T KOG0629|consen 375 VDVFKLWLMWKAKG---TQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPPSLRGWQENPERDSRL 451 (510)
T ss_pred ccHHHHHHHHHhcc---cccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeeccCchHhccCcccchhhhHH
Confidence 111111 111 1224677888999999999999997 44433 244 344445443322110 101
Q ss_pred -hhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC--CCcccHHHHHHHHHHHHHH
Q 019899 276 -KGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS--LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 276 -~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~--~~~~~l~~~l~~l~~~~~~ 332 (334)
+.+..+-..+++ +|.....-... ...++++|+.+++ .+..|++-+++.|..+-++
T Consensus 452 ~kVaPkIK~~Mm~-~Gt~Mi~YqPl-~~~~nffr~v~sn~a~~~ad~dflldEIerlgq~ 509 (510)
T KOG0629|consen 452 VKVAPKIKERMMK-KGTTMIGYQPL-GDKPNFFRMVISNPALTEADLDFLLDEIERLGQD 509 (510)
T ss_pred HhhCcHHHHHHHh-ccceeeEeccc-ccccchhheecccchhhhhhHHHHHHHHHHhccC
Confidence 122234445455 46544321211 1246789998774 5899999999999876543
No 376
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.31 E-value=1e-09 Score=92.88 Aligned_cols=285 Identities=12% Similarity=0.102 Sum_probs=171.7
Q ss_pred CCCCCC--cEEEec-CcHHHHHHHHHHhcCCCCeEEec---CCCCCChhhh--hhhccCcEE----EEEeCCCCCCcccc
Q 019899 13 VSFDPS--QIVLTA-GATPAVEILCFCLADHGNALLVP---SPYYPGFDRD--IRFRTGVEL----IPVHCRSTDNFAFS 80 (334)
Q Consensus 13 ~~~~~~--~i~~~~-g~~~~~~~~~~~l~~~gd~vl~~---~p~~~~~~~~--~~~~~g~~v----~~v~~~~~~~~~~~ 80 (334)
++++++ .|-+-+ +++.|+..+..++++|+++|.=. +..|-++.-. -+.-....+ .++.++ +...-||
T Consensus 99 F~ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~-~~TG~ID 177 (477)
T KOG2467|consen 99 FGLDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVD-PSTGYID 177 (477)
T ss_pred hCCCHHHCceeeccCCCCchhhHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeC-CCCCcee
Confidence 556666 233333 45669999999999999988643 3333222111 110111111 122233 2445789
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccc-cccCCCCcchhhhhhhcc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGG-SIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~-~~~~~~~~~~~~~~~~~~ 159 (334)
.|.|++..... ++++|+.-.... -..++ -.++.++|.+.|.+++.|-+|.. ++-.+..+.++
T Consensus 178 YD~Le~~A~~f-----rPk~iiaG~SaY--~R~~D---YaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPF------- 240 (477)
T KOG2467|consen 178 YDKLEKTATLF-----RPKLIIAGTSAY--SRLID---YARFRKIADKVGAYLMADMAHISGLVAAGVIPSPF------- 240 (477)
T ss_pred hHHHHHHHHhc-----CCcEEEeccccc--hhhcc---HHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcc-------
Confidence 99999988887 899655443333 35666 55555666677999999999843 33333222222
Q ss_pred ccCCCcEEEEecccccCCCCCceEEEEeecCHH---------------HHHHHHHh---hcccCCChHHHHHHHHhhCCh
Q 019899 160 EVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNES---------------VLAAAKKL---TRFCSISAPTQRLLISMLSDT 221 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~---------------~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~ 221 (334)
.-.+++.++.+|++ .|.|.|.|..+ +. +-+.+... ...+++......+++-+|+..
T Consensus 241 ---ey~DiVTTTTHKsL--RGPRg~mIFyR-kGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa 314 (477)
T KOG2467|consen 241 ---EYCDIVTTTTHKSL--RGPRGAMIFYR-KGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQA 314 (477)
T ss_pred ---cccceeeccccccc--cCCcceeEEEe-ccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhh
Confidence 33457788999988 77888998863 21 12222211 112345556666777666542
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc-CCCceeEEeeecCC-cCCCCChhhHHHHHHHHHHhcCeEEcCCCCc
Q 019899 222 KFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCS-ESSAGLYCWADMSG-LIPSYSEKGELELWDKLLNIAKINVTPGSAC 299 (334)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~-~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~ 299 (334)
. ...+.+...++.+++..+.+.|.+.|.+++ ....+..+.+++.+ ..++ ..+.++++..+|.+.-...+
T Consensus 315 ~--tpefk~Yq~qV~~Nakala~~l~~~Gy~lvtgGTDnHlvLvDLr~~G~dG-------arvE~vle~~~I~~NKNtvp 385 (477)
T KOG2467|consen 315 M--TPEFKEYQKQVLKNAKALASALISRGYKLVTGGTDNHLVLVDLRPKGVDG-------ARVEKVLELCHIALNKNTVP 385 (477)
T ss_pred C--CHHHHHHHHHHHHHHHHHHHHHHHcCceEecCCccceEEEEeccccCCch-------HHHHHHHHHhhhhhcCCcCC
Confidence 2 334577888999999999999999999876 34445555567754 3333 44455566666665433333
Q ss_pred CC---CCCCeEEEEecC-----CCcccHHHHHHHHHHHH
Q 019899 300 HC---IEPGWFRCCFTS-----LTHEDIPLVIERIQKVA 330 (334)
Q Consensus 300 ~~---~~~~~iRi~~~~-----~~~~~l~~~l~~l~~~~ 330 (334)
|- -.++.+|++... ..++|++++.+-|.+++
T Consensus 386 GD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av 424 (477)
T KOG2467|consen 386 GDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAV 424 (477)
T ss_pred CCccccCCCceeccchhhcccCccHHHHHHHHHHHHHHH
Confidence 22 246789998654 24678877777766654
No 377
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.29 E-value=1.5e-09 Score=94.34 Aligned_cols=296 Identities=16% Similarity=0.190 Sum_probs=167.7
Q ss_pred CCcEEEecCcHH-HHHHHHHHhc--CCCCeEEecCCCCCChhhhhhhccCcEEEEEeCC-CCCCccccHHHHHHHHHHHH
Q 019899 17 PSQIVLTAGATP-AVEILCFCLA--DHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCR-STDNFAFSITALDQAFNQAR 92 (334)
Q Consensus 17 ~~~i~~~~g~~~-~~~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~-~~~~~~~~~~~l~~~l~~~~ 92 (334)
...+++++-+|. .+.+.+.++. ..++.|+.+.-.+.+...++. .+|.+++.||.. +.+....|.+.+++.+++.
T Consensus 74 ~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~-~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~- 151 (389)
T PF05889_consen 74 VKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIE-RAGLEPVVVENVLEGDELITDLEAIEAKIEEL- 151 (389)
T ss_dssp HCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHH-HTT-EEEEE-EEEETTEEEEHHHHHHHHHHHH-
T ss_pred ccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHH-hcCCeEEEeeccCCCCeeeccHHHHHHHHHHh-
Confidence 346788877763 2333344443 467899999988888888888 899999999843 3455567889999998765
Q ss_pred HcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcE-EEEec
Q 019899 93 KRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRV-HIIYG 171 (334)
Q Consensus 93 ~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s 171 (334)
|....+.++++++.-.+..- +++.+|.++|++||++.++..+|+. ..........+ ....+++ +++.|
T Consensus 152 --G~~~iLcvltttscfapr~~--D~i~~IakiC~~~~IPhlvNnAYgv------Q~~~~~~~i~~-a~~~GRvda~vqS 220 (389)
T PF05889_consen 152 --GADNILCVLTTTSCFAPRLP--DDIEEIAKICKEYDIPHLVNNAYGV------QSSKCMHLIQQ-AWRVGRVDAFVQS 220 (389)
T ss_dssp --CGGGEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTTT------T-HHHHHHHHH-HHHHSTCSEEEEE
T ss_pred --CCCCeEEEEEecCccCCCCC--ccHHHHHHHHHHcCCceEEccchhh------hHHHHHHHHHH-HHhcCCcceeeee
Confidence 34556778887765555543 3699999999999999999999974 11111111111 0013344 66778
Q ss_pred ccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHh---
Q 019899 172 LSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQ--- 248 (334)
Q Consensus 172 ~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--- 248 (334)
..|-| +.|...+.+.+.++..++.+.+.-..-...++....+..++..+ ...+........+...++.++|++
T Consensus 221 ~dkNF-~VPvGgai~As~~~~~i~~vs~~YpGRas~sp~ld~~itLl~LG---~~g~~~ll~~r~~~f~~l~erl~~~ae 296 (389)
T PF05889_consen 221 TDKNF-MVPVGGAIMASFDPSGILAVSKEYPGRASASPSLDLFITLLSLG---CTGYGALLKERKASFPYLKERLKKWAE 296 (389)
T ss_dssp HHHHH-CEESSHEEEEESSHHHHHHHHHTSHSHBTSHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCE-EecCCCcEEEecCHHHHHHHHHHhhhhhhcccchHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88988 45555677777788888777643222122233333444444322 112233333344444444444443
Q ss_pred -CCCccc-CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeE----EcCCCCcC---CC--CCCeEEEEec-CCCc
Q 019899 249 -LGIRCS-ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKIN----VTPGSACH---CI--EPGWFRCCFT-SLTH 316 (334)
Q Consensus 249 -~g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~----v~~g~~~~---~~--~~~~iRi~~~-~~~~ 316 (334)
.+-.+. .|.+...+.+.++...... ..+...+... |..+||. +.|+.... .+ ...|+-++.. .++.
T Consensus 297 e~~e~ll~~p~N~is~a~tl~~l~~~~-~k~~~~lgs~-Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~AsaiG~~~ 374 (389)
T PF05889_consen 297 EVGERLLETPRNHISMAFTLDTLYEIS-QKDGTFLGSM-LFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAASAIGMTR 374 (389)
T ss_dssp HTTEEBSSSTT-SSEEEEE-TTCCTCC-SSHHHHHHHH-HHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE-TT--H
T ss_pred HhhhhhcCCCCCCeeEEEECccchhhc-cchhhhHHHH-HHhCCcccceeeccCCCcccccCCCCchHHHHHHHHhCCCH
Confidence 343333 3566666767777543221 1344566666 4446774 33332221 11 1368888544 2899
Q ss_pred ccHHHHHHHHHHHHH
Q 019899 317 EDIPLVIERIQKVAE 331 (334)
Q Consensus 317 ~~l~~~l~~l~~~~~ 331 (334)
+|++.++++|.++++
T Consensus 375 eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 375 EEVDYFVKRLDKIIK 389 (389)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC
Confidence 999999999999875
No 378
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.20 E-value=5.2e-09 Score=89.30 Aligned_cols=217 Identities=18% Similarity=0.184 Sum_probs=123.7
Q ss_pred CcHHHHHHHHHHhcCCCCeEEecC-CCCCChhhhh----------hhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 25 GATPAVEILCFCLADHGNALLVPS-PYYPGFDRDI----------RFRTGVELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 25 g~~~~~~~~~~~l~~~gd~vl~~~-p~~~~~~~~~----------~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
++|+|+..++..++.|||+.+..+ .=|......+ + ..|.+...+++. ++..+|++.+++++++
T Consensus 80 SGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~-e~Gi~Y~~v~L~--~dg~~D~~~i~~~~~~--- 153 (403)
T PF06838_consen 80 SGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLK-EFGIKYREVPLT--EDGTIDWEAIKKALKP--- 153 (403)
T ss_dssp SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTG-GGT-EEEE--B---TTSSB-HHHHHHHHHT---
T ss_pred chHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChH-HhCceeEEEeec--CCCCcCHHHHHHhhcc---
Confidence 689999999999999999998654 3344333332 3 468889999984 5558999999999996
Q ss_pred cCCceeEEEEeCC-CCCcccCCCHHHHHHHHHHHHh--cCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEe
Q 019899 94 RGVKVRGILICNP-ANPVGNIIPRETLYELLDFARE--KNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIY 170 (334)
Q Consensus 94 ~~~~~~~i~~~~p-~nptG~~~~~~~l~~i~~~~~~--~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (334)
++|++++.-. ...+-..++.++++++++++++ .+++++||++|+.|+-..++ .. .+.++..+
T Consensus 154 ---~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~EP-~~-----------vGADl~aG 218 (403)
T PF06838_consen 154 ---NTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQEP-TE-----------VGADLMAG 218 (403)
T ss_dssp ---TEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS-G-GG-----------GT-SEEEE
T ss_pred ---CceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccccCc-cc-----------cchhheec
Confidence 8998888766 3455557899999999999876 48999999999986632211 11 46678999
Q ss_pred cccccCCCCC--ceEEEEeecCHHHHHHHHH-hhccc--CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHH
Q 019899 171 GLSKDLSLPG--FRTGVIYSYNESVLAAAKK-LTRFC--SISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAG 245 (334)
Q Consensus 171 s~sK~~~~~g--~r~g~i~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (334)
|+-|-.| .| .-.|||.. ++++++.... +..++ ..-..+......++ .+-++..+ ...+..+-+-.....
T Consensus 219 SLIKNpG-GgiAptGGYIaG-r~~lVe~~a~RLTaPGiG~e~G~t~~~~R~~~-QGlFlAP~---vV~eAlKgaif~A~~ 292 (403)
T PF06838_consen 219 SLIKNPG-GGIAPTGGYIAG-RKDLVERAAYRLTAPGIGKEVGATLGTNRLMF-QGLFLAPH---VVGEALKGAIFAAAL 292 (403)
T ss_dssp ETTSGGG-TTT-SS-EEEEE-SHHHHHHHHHHHS-TTTGGGSS--TTTHHHHH-HHHHHHHH---HHHHHHHHHHHHHHH
T ss_pred cceeCCC-CCccCcCCEEec-hHHHHHHHHhhhcCCccccccccCcchHHHHH-hHHhhchH---HHHHHHHHHHHHHHH
Confidence 9999885 33 24588888 8999888764 33331 00000011111111 11122322 222333344455556
Q ss_pred HHhCCCcccC----CCceeEEeeecCC
Q 019899 246 LKQLGIRCSE----SSAGLYCWADMSG 268 (334)
Q Consensus 246 l~~~g~~~~~----~~~g~~~~~~~~~ 268 (334)
++++|+++.+ +..-....+.+..
T Consensus 293 fe~lG~~v~P~~~~~R~DiIQai~l~~ 319 (403)
T PF06838_consen 293 FEKLGFEVSPKPDDPRSDIIQAIELGS 319 (403)
T ss_dssp HHHTT-EEES-TTS--SSS-EEEE-SS
T ss_pred HHHcCCcCCCCCCCCCCceEEEEECCC
Confidence 6778988654 3334455556554
No 379
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.19 E-value=2.2e-09 Score=93.22 Aligned_cols=179 Identities=20% Similarity=0.194 Sum_probs=132.1
Q ss_pred CCCcEEEecCcHHHHHHHHHHhcCCCCeEEec----C-CCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHH
Q 019899 16 DPSQIVLTAGATPAVEILCFCLADHGNALLVP----S-PYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQ 90 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~----~-p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~ 90 (334)
..+.++++++.+.++..+..++.+++. |++. . +.+++..+.++ ..|++++.+... + .....+++.+|.+
T Consensus 82 ~aea~~ivnnn~aAVll~~~al~~~~E-vVis~g~lV~gg~~~v~d~~~-~aG~~l~EvG~t---n-~t~~~d~~~AIne 155 (395)
T COG1921 82 GAEAAAIVNNNAAAVLLTLNALAEGKE-VVVSRGELVEGGAFRVPDIIR-LAGAKLVEVGTT---N-RTHLKDYELAINE 155 (395)
T ss_pred chhheeeECCcHHHHHHHHhhhccCCe-EEEEccccccCCCCChhHHHH-HcCCEEEEeccc---C-cCCHHHHHHHhcc
Confidence 467899999999999999999886544 4333 1 57888999999 999999999842 2 3578999999997
Q ss_pred HHHcCCceeEEEEeCCCCC-cccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEE
Q 019899 91 ARKRGVKVRGILICNPANP-VGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHII 169 (334)
Q Consensus 91 ~~~~~~~~~~i~~~~p~np-tG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (334)
++++++-++.+|- .---++ .++++++|+++++++++|.+-+..... -........ .+.++++
T Consensus 156 ------~ta~llkV~s~~~~f~~~l~---~~~l~~ia~~~~lpvivD~aSg~~v~~---e~~l~~~la-----~GaDLV~ 218 (395)
T COG1921 156 ------NTALLLKVHSSNYGFTGMLS---EEELVEIAHEKGLPVIVDLASGALVDK---EPDLREALA-----LGADLVS 218 (395)
T ss_pred ------CCeeEEEEeecccccccccc---HHHHHHHHHHcCCCEEEecCCcccccc---ccchhHHHh-----cCCCEEE
Confidence 7888877777652 222345 788999999999999999986554331 234444444 6788899
Q ss_pred ecccccCCCCCceEEEEeecCHHHHHHHHHh--hcccCCChHHHHHHHHhhCC
Q 019899 170 YGLSKDLSLPGFRTGVIYSYNESVLAAAKKL--TRFCSISAPTQRLLISMLSD 220 (334)
Q Consensus 170 ~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~ 220 (334)
+|..|.++ |.+.|.+++ ++++++.+++. ...+........++..+++.
T Consensus 219 ~SgdKllg--GPqaGii~G-kKelI~~lq~~~l~Ralrv~K~tla~l~~aLe~ 268 (395)
T COG1921 219 FSGDKLLG--GPQAGIIVG-KKELIEKLQSHPLKRALRVDKETLAALEAALEL 268 (395)
T ss_pred EecchhcC--CCccceEec-hHHHHHHHHhhhhhhhhhcCcHhHHHHHHHHHH
Confidence 99999884 557888887 89999888765 33455666666666665543
No 380
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.18 E-value=8.6e-10 Score=96.31 Aligned_cols=279 Identities=18% Similarity=0.161 Sum_probs=169.8
Q ss_pred EEecCcHHHHHHHHHHh----cC-CC---CeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHH
Q 019899 21 VLTAGATPAVEILCFCL----AD-HG---NALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQAR 92 (334)
Q Consensus 21 ~~~~g~~~~~~~~~~~l----~~-~g---d~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~ 92 (334)
..|+|+|+++...-..- .+ .| ..++.+...+..+....+ ..+.++..||+.+ +.+.+|+..+.+.+++
T Consensus 142 ~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~-yf~v~l~~V~~~~-~~~~~D~~k~~~~i~e-- 217 (491)
T KOG1383|consen 142 CGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAAR-YFEVELREVPLDE-GDYRVDPGKVVRMIDE-- 217 (491)
T ss_pred ccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHh-hEEEEEEeeeccc-cceEecHHHHHHHhcc--
Confidence 34667888844443221 11 22 346666667777777776 7889999999864 7889999999999998
Q ss_pred HcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHh-cCcEEEEeccccccccC-CCCcchhhhhhhccccCCCcEEEEe
Q 019899 93 KRGVKVRGILICNPANPVGNIIPRETLYELLDFARE-KNIHVISDEIYGGSIFG-NEEFVSMAEILEAEEVDKDRVHIIY 170 (334)
Q Consensus 93 ~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~-~~~~vi~D~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (334)
++..++.+.|+.|+|..-+ +++|.++..+ +++++.+|.+-+.|.-+ +.. .... .++....|..+.
T Consensus 218 ----Nti~lv~~~~~~p~G~~e~---ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~--~~~~----fdFr~p~V~Sis 284 (491)
T KOG1383|consen 218 ----NTIMLVGSLPNFPTGEIED---VEKLADLLLEIWDIPIHVDACLGGFINPAGYL--NEEE----FDFRVPGVTSIS 284 (491)
T ss_pred ----ceEEEEEEcCCCCccchhh---HHHHHHHHHHHhCCceeecccCcccccccccc--Cccc----cccCCCCceeEe
Confidence 8999999999999999988 8888888888 99999999998877653 111 1111 122234444443
Q ss_pred -cccccCCCCCceEEEEeecCHHHHHH-HHHhhc---------ccCCChH---HHHHHHHhhCChHHHHHHHHHHHHHHH
Q 019899 171 -GLSKDLSLPGFRTGVIYSYNESVLAA-AKKLTR---------FCSISAP---TQRLLISMLSDTKFIQEYLETNKRRIK 236 (334)
Q Consensus 171 -s~sK~~~~~g~r~g~i~~~~~~~~~~-~~~~~~---------~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~ 236 (334)
+.+| +|+..-..||++-++++++.. +..... ..+.|.+ ...+.++++..+ .+...+..+++.
T Consensus 285 a~~HK-YGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG---~eGY~~~~~~iv 360 (491)
T KOG1383|consen 285 ADGHK-YGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLG---EEGYRENTQNIV 360 (491)
T ss_pred eccce-eeeeecCcEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhh---HHHHHHHHHHHH
Confidence 5567 444555588988766665332 211111 1112222 223333333333 233355566688
Q ss_pred HHHHHHHHHHHhC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC--
Q 019899 237 KLYDSFVAGLKQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS-- 313 (334)
Q Consensus 237 ~~~~~~~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-- 313 (334)
+....+++.+++. ++.++..+.--+..++-.. . +-.++.+. +.+.|=.+. ...+ +..+-+++..
T Consensus 361 e~~~~l~egie~i~~i~i~gkp~vs~~~~~s~~-~------~i~elsd~-l~~~GW~ln-alq~----P~a~Hi~vt~~~ 427 (491)
T KOG1383|consen 361 ETARKLREGIENIKGIKIVGKPLVSFILFGSND-V------NIFELSDL-LRKKGWILN-ALQF----PAAIHICVTRVH 427 (491)
T ss_pred HHHHHHHHhhhccccceecCCCcEEEEEccCCc-c------chhhhhHH-HHhcCcCcc-ccCC----CCceEEEEEeee
Confidence 8889999999987 6777765332222222111 1 22355555 665776554 3323 2345555542
Q ss_pred CCcccHHHHHHHHHHHHHHc
Q 019899 314 LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 314 ~~~~~l~~~l~~l~~~~~~~ 333 (334)
..++-.++++..++++++++
T Consensus 428 ~~~~~A~~~v~Di~~~~~el 447 (491)
T KOG1383|consen 428 AREDVADRFVADIRKVVEEL 447 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHH
Confidence 23444577788888777653
No 381
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.12 E-value=1.6e-08 Score=98.07 Aligned_cols=267 Identities=15% Similarity=0.142 Sum_probs=165.6
Q ss_pred hcCCCCCCCCcEEEecCcHHHHHHHHHHh-c--CCCCeEEecCCCCCChhhhhh---hccCcEEEEEeCCCCCCccccHH
Q 019899 9 LGQAVSFDPSQIVLTAGATPAVEILCFCL-A--DHGNALLVPSPYYPGFDRDIR---FRTGVELIPVHCRSTDNFAFSIT 82 (334)
Q Consensus 9 ~~~~~~~~~~~i~~~~g~~~~~~~~~~~l-~--~~gd~vl~~~p~~~~~~~~~~---~~~g~~v~~v~~~~~~~~~~~~~ 82 (334)
+....+.+..|.-+..++|++.++++.+. . +++++|++++-.|+.+...++ ...|.+++.++ ++
T Consensus 118 i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~----------~~ 187 (939)
T TIGR00461 118 VSDLTGLPVANASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD----------CS 187 (939)
T ss_pred HHHHHCCChhhhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc----------HH
Confidence 33445677788888888888888776663 2 234899999999998886665 24688888775 23
Q ss_pred HHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccC
Q 019899 83 ALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVD 162 (334)
Q Consensus 83 ~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (334)
+|++.+ ++.++++.+|++ .|.+.+ +++|.++++++|.+++++.-.-. ..-+.....
T Consensus 188 ~l~~~~--------~~~~v~~q~Pn~-~G~ied---~~~i~~~~h~~gal~~~~ad~~a-------l~ll~~Pge----- 243 (939)
T TIGR00461 188 DIKKAV--------DVFGCLLQYPAT-DGSILD---YKQLIDALHSHKSLVSVAADLMA-------LTLLTPPGH----- 243 (939)
T ss_pred HHhhcC--------CEEEEEEECCCC-CeEEec---HHHHHHHHHHcCCEEEEEechHH-------hCCcCCHHH-----
Confidence 444333 356677888864 788876 99999999999999998532111 111111111
Q ss_pred CCcEEEEecccccCCC----CCceEEEEeecCHHHHHHHHHh----------------------hc----ccCCChHHHH
Q 019899 163 KDRVHIIYGLSKDLSL----PGFRTGVIYSYNESVLAAAKKL----------------------TR----FCSISAPTQR 212 (334)
Q Consensus 163 ~~~~~~~~s~sK~~~~----~g~r~g~i~~~~~~~~~~~~~~----------------------~~----~~~~~~~~~~ 212 (334)
.+-+++++ .+|.||. .|...|++.+ ++++...+.-. +. -.+.|.-...
T Consensus 244 ~GaDi~vg-~~q~fg~p~g~GGP~aG~~a~-~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~q 321 (939)
T TIGR00461 244 YGADIVLG-SSQRFGVPMGYGGPHAAFFAV-KDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQ 321 (939)
T ss_pred cCCcEEee-CCCccCCCCCCCCCceeeeee-cHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHH
Confidence 56677754 3444543 3556788877 55554443100 00 0011111111
Q ss_pred HHHHhhCC---hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCceeE--EeeecCCcCCCCChhhHHHHHHHHHH
Q 019899 213 LLISMLSD---TKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLY--CWADMSGLIPSYSEKGELELWDKLLN 287 (334)
Q Consensus 213 ~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~ll~ 287 (334)
++.+.... .-+..+.+.+..++...+..++.+.|++.|+++..+ .+| +.++++. .++.++.+++ .
T Consensus 322 aL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G~~~~~~--~fF~~~~v~~~~-------~~~~~i~~~~-~ 391 (939)
T TIGR00461 322 VLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLENDPHELINK--TWFDTLTVKVGN-------GISSELLKAA-E 391 (939)
T ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC--CccceEEEEeCC-------CCHHHHHHHH-H
Confidence 11111110 011244567778888899999999999999987765 333 2234431 1345778885 4
Q ss_pred hcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHH
Q 019899 288 IAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQ 327 (334)
Q Consensus 288 ~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~ 327 (334)
++||.++.. .++.+++|+.. .|++|++.+++.+.
T Consensus 392 ~~gi~l~~~------~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 392 EFNINLRAV------DTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred HCCCeeeec------CCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 489997652 24579999986 58999999999885
No 382
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.06 E-value=7.8e-09 Score=92.00 Aligned_cols=261 Identities=19% Similarity=0.229 Sum_probs=136.1
Q ss_pred CCCCcEEEecCcHHHHHHHHHHh---cCCCCeEEecCCCCCChhhhhhh---ccCcEEEEEeCCCCCCccccHHHHHHHH
Q 019899 15 FDPSQIVLTAGATPAVEILCFCL---ADHGNALLVPSPYYPGFDRDIRF---RTGVELIPVHCRSTDNFAFSITALDQAF 88 (334)
Q Consensus 15 ~~~~~i~~~~g~~~~~~~~~~~l---~~~gd~vl~~~p~~~~~~~~~~~---~~g~~v~~v~~~~~~~~~~~~~~l~~~l 88 (334)
.+..+.-+-.+++++-.++..+. .+++++|+++.-.|+.+...++. ..|.+++.++..+ +...|
T Consensus 125 mdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~--~~~~d-------- 194 (429)
T PF02347_consen 125 MDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDE--DGTTD-------- 194 (429)
T ss_dssp SSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBT--TCSB---------
T ss_pred CCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccc--cCCcc--------
Confidence 44445556667776666655543 23346999999999998876551 3689999999743 22233
Q ss_pred HHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEE
Q 019899 89 NQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHI 168 (334)
Q Consensus 89 ~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (334)
. .++.+|++.+|++ .|.+-+ +++|+++++++|.++++ .+ -..... -+.+... .+-+++
T Consensus 195 ~------~~~a~v~vq~Pn~-~G~~ed---~~~i~~~~h~~gal~~~-~a-d~~aL~-----~l~~Pge-----~GADI~ 252 (429)
T PF02347_consen 195 D------DDTAAVMVQNPNT-FGVFED---IKEIADIAHAAGALVIV-GA-DPNALG-----GLKSPGE-----YGADIV 252 (429)
T ss_dssp S------TTEEEEEEESS-T-TSB--T---HHHHHHHHHHTT-EEEE-CG-GCCGCC-----TC--GGG-----GT-SEE
T ss_pred c------cCeEEEEeecCCC-CceEee---HHHHHHHHHHcCCEEEE-ec-CHHHHh-----CcCChhh-----cCccEE
Confidence 2 3899999999985 688877 99999999999999987 43 222221 1222221 566777
Q ss_pred EecccccCCC----CCceEEEEeecCHHHHHH----------------------------HHHhhcc--cCCChHHHH-H
Q 019899 169 IYGLSKDLSL----PGFRTGVIYSYNESVLAA----------------------------AKKLTRF--CSISAPTQR-L 213 (334)
Q Consensus 169 ~~s~sK~~~~----~g~r~g~i~~~~~~~~~~----------------------------~~~~~~~--~~~~~~~~~-~ 213 (334)
+++ +|.||. .|...|++.+ ++++... +++.+.. .+.+..... +
T Consensus 253 vg~-~Q~fg~p~~~GGP~~G~~a~-~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~ 330 (429)
T PF02347_consen 253 VGE-HQTFGIPMGFGGPGAGFFAV-REDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALA 330 (429)
T ss_dssp EEC-CTTTT---CCC-S--EEEEE--GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHH
T ss_pred eeC-CCCCcccCCCCCCCeeeEEE-hhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHH
Confidence 765 777763 3566788877 4444332 2222222 222222222 2
Q ss_pred HHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCceeEEe-eecCCcCCCCChhhHHHHHHHHHHhcCe
Q 019899 214 LISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSESSAGLYCW-ADMSGLIPSYSEKGELELWDKLLNIAKI 291 (334)
Q Consensus 214 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ll~~~gi 291 (334)
+..++.. +..+-+.+..++...+++++.++|++. ++.+.. ..|+=+ +..++. ....++.++.. ..|+
T Consensus 331 a~~Yl~~--~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~~--~~f~e~v~~~~~~------~~~~~l~~~~~-~~gl 399 (429)
T PF02347_consen 331 AAIYLAY--LGPEGLREIAERIHLNAHYLAERLKKIYGLPFDN--PFFFEFVVVFSKD------KEVEELLKRGI-EGGL 399 (429)
T ss_dssp HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHCCTTBECSSS--SSBSSEEEEESS-------HHHHHHHHTT-----E
T ss_pred HHHHHHH--hCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCC--CCceeeeeecCCc------HHHHHHHHHHH-hcCC
Confidence 2222222 236677889999999999999999986 333322 222211 222221 11122333322 2443
Q ss_pred EEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHH
Q 019899 292 NVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERI 326 (334)
Q Consensus 292 ~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l 326 (334)
... ....+.+-+|+.. .+++|++++++.+
T Consensus 400 ~~~------~~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 400 NLR------YPDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp EEG------GG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred Ccc------ccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 332 1234577788886 4888999988764
No 383
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=99.01 E-value=1.4e-07 Score=82.65 Aligned_cols=268 Identities=18% Similarity=0.160 Sum_probs=155.1
Q ss_pred eEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHH
Q 019899 43 ALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYEL 122 (334)
Q Consensus 43 ~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i 122 (334)
.+...+.+|.+...++. ..|.+.+.++.+ .++.++.+.|.++|++...+|--+-.++.+-. .||.+ ..+++.+|
T Consensus 184 V~Y~SDqahssveka~~-i~~VklR~l~td--~n~~mr~~~L~~AIe~D~arGlIPf~v~at~G--TT~~c-a~D~l~el 257 (511)
T KOG0628|consen 184 VAYCSDQAHSSVEKACL-IAGVKLRALPTD--ENFGMRGDTLRKAIEEDIARGLIPFFVCATLG--TTSSC-AFDELEEL 257 (511)
T ss_pred eEEecCcccchHHHhHh-hcceeEEEeecc--cCcCCCHHHHHHHHHHHHhCCCccEEEEEeec--Ccccc-ccccHHHh
Confidence 45667889999999887 889999999974 48999999999999987776644432322222 23333 34569999
Q ss_pred HHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCH-----------
Q 019899 123 LDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNE----------- 191 (334)
Q Consensus 123 ~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~----------- 191 (334)
.-+|+++|+|+++|.+|++..+. -..+..+.. ++ ...+-+-...||++- .-+-++.+..++.
T Consensus 258 g~Vc~~~glWLHVDAAYAGsa~i---CpE~r~l~r--Gi-e~aDSfn~n~hK~~~-vnfDCs~lWvkd~~~~~~~~~vdp 330 (511)
T KOG0628|consen 258 GPVCREEGLWLHVDAAYAGSAFI---CPEFRYLMR--GI-EYADSFNFNPHKWLL-VNFDCSPLWVKDGTKLSRAFNVDP 330 (511)
T ss_pred cchhhhcCEEEEeehhhcccccc---CHHHHHHhh--cc-hhhccccCChhheeE-EeeeeecceeecCceeeeeeecCh
Confidence 99999999999999999864432 122333222 11 111123345677652 3344444443222
Q ss_pred HHHHHHHHh-hcc---cCCC-hHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCc-eeEEee
Q 019899 192 SVLAAAKKL-TRF---CSIS-APTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSESSA-GLYCWA 264 (334)
Q Consensus 192 ~~~~~~~~~-~~~---~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~-g~~~~~ 264 (334)
...+.-... ... +..+ .....++..++...-+..+.+++..++..+.++.+.+.+.+- .|++..+.- |+.+ +
T Consensus 331 ~yL~h~~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~~lgLvc-F 409 (511)
T KOG0628|consen 331 LYLKHAYQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNKRILGLVC-F 409 (511)
T ss_pred HhhcchhhccCCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecccccceeE-E
Confidence 111111100 000 1111 111122333322222223444555555555555555555432 566654433 4444 4
Q ss_pred ecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC--CCcccHHHHHHHHHHHHHH
Q 019899 265 DMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS--LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~--~~~~~l~~~l~~l~~~~~~ 332 (334)
++.+. .+.-..+.+++-....|.+.|.+.- +.-.+|+++++ .+++|+++..+.+.+..+.
T Consensus 410 Rlk~~-----N~~ne~Ll~~in~~g~i~l~~~~l~---gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~ 471 (511)
T KOG0628|consen 410 RLKGD-----NEINEALLNRLNSSGRIHLVPASLH---GKFVLRFAVCSPLTNESDIDEAWKIIFEAADE 471 (511)
T ss_pred eecCC-----cHHHHHHHHHHHhcCcEEEEEeeec---ceEEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Confidence 55432 1233578888666677888876642 23468999885 4888999999999888765
No 384
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=98.98 E-value=8.8e-08 Score=79.60 Aligned_cols=293 Identities=12% Similarity=0.121 Sum_probs=177.9
Q ss_pred hhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCC---CeEEecCCCCCC----hhhhhhhccCcEEEEEe--C-CCCCC
Q 019899 7 QVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHG---NALLVPSPYYPG----FDRDIRFRTGVELIPVH--C-RSTDN 76 (334)
Q Consensus 7 ~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~g---d~vl~~~p~~~~----~~~~~~~~~g~~v~~v~--~-~~~~~ 76 (334)
..++..+++..++|.+.++-|..+..++.++.+|- -+|++..-+|++ +...++ ..|..+...- + +.+++
T Consensus 118 ~l~~~iVGA~e~EvavmNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~-lhG~~~e~sm~~iePREGE 196 (465)
T KOG3846|consen 118 PLLAPIVGAQENEVAVMNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCK-LHGISPENSMIQIEPREGE 196 (465)
T ss_pred hhhhhhccCCchhhhhHhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhh-hcCCChHHheEEecccccc
Confidence 34556678888999999999999999999997654 578888776665 445566 6776653221 2 23566
Q ss_pred ccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhh
Q 019899 77 FAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEIL 156 (334)
Q Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~ 156 (334)
..+..+++.+.|+.. |..+.+|+++..+.-||+.++ +.+|...-...|++|=.|-+|.. ++ +++. +-
T Consensus 197 etlRteDILd~IEkn---gDeiA~v~fSGvqyYTGQ~Fd---i~aIT~Agq~kgc~VGfDLAHAv---gN---VpL~-LH 263 (465)
T KOG3846|consen 197 ETLRTEDILDTIEKN---GDEIALVCFSGVQYYTGQYFD---IGAITFAGQFKGCLVGFDLAHAV---GN---VPLQ-LH 263 (465)
T ss_pred cchhHHHHHHHHHhc---CCeEEEEEeecceeecccccc---hhhhhhcccCCCcEechhhhhhh---cC---CceE-Ee
Confidence 677888888888764 556777777777999999999 88888766778999999988764 11 2221 11
Q ss_pred hccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc-----------------------cCCChHHHHH
Q 019899 157 EAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF-----------------------CSISAPTQRL 213 (334)
Q Consensus 157 ~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~ 213 (334)
+|+.++.|.+.-|.++...-.+|-+....+...+...++..+ +..|.+....
T Consensus 264 -----dWgVDFACWCSYKYlnaGaGgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~ 338 (465)
T KOG3846|consen 264 -----DWGVDFACWCSYKYLNAGAGGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIID 338 (465)
T ss_pred -----ecCCceEEEeeecccccCCCccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhH
Confidence 388889999999988522224555554233333333222211 2223333333
Q ss_pred HHHhhCChHHHHHH-HHHHHHHHHHHHHHHHHHHHhC-C-----------CcccCC----CceeEEeeecCCcCCCCChh
Q 019899 214 LISMLSDTKFIQEY-LETNKRRIKKLYDSFVAGLKQL-G-----------IRCSES----SAGLYCWADMSGLIPSYSEK 276 (334)
Q Consensus 214 ~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~-g-----------~~~~~~----~~g~~~~~~~~~~~~~~~~~ 276 (334)
..++..+.+...+. +.+++.+.--...++...++.. | +.+..| +.|.-+.+.++.+.
T Consensus 339 v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fssp~------ 412 (465)
T KOG3846|consen 339 VVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSSPT------ 412 (465)
T ss_pred HHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeCCCc------
Confidence 33333333322221 2333333322233333333221 2 122222 33555555555432
Q ss_pred hHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC--CCcccHHHHHHHHHHHHHHc
Q 019899 277 GELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS--LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 277 ~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~--~~~~~l~~~l~~l~~~~~~~ 333 (334)
..+... |.++|+..--. .++.||+.... .+-.|+..++..|.++++..
T Consensus 413 --~~vfqe-L~krGv~~DkR------~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~ 462 (465)
T KOG3846|consen 413 --PKVFQE-LHKRGVIGDKR------RPNVIRVAPVPLYNTFSDVYIFVNALNEAMDKL 462 (465)
T ss_pred --hHHHHH-HHHcCeecccc------CCCceEeecchhhccHHHHHHHHHHHHHHHHHh
Confidence 377888 45578876422 36789998664 47889999999999998764
No 385
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.91 E-value=1.6e-09 Score=93.35 Aligned_cols=213 Identities=20% Similarity=0.235 Sum_probs=51.5
Q ss_pred CCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCC---CCC---hhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHH
Q 019899 16 DPSQIVLTAGATPAVEILCFCLADHGNALLVPSPY---YPG---FDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFN 89 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~---~~~---~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~ 89 (334)
.++..+++|+...|+.+++.++. +|.+|++.... ++. +.+.++ ..|+.++.|...+ .-.+++++++|+
T Consensus 61 gAeaA~VvNnnaAAv~L~l~~la-~~~EvIvsRGelVeiGgsFRip~vm~-~sGa~lvEVGttN----~t~~~Dye~AI~ 134 (367)
T PF03841_consen 61 GAEAALVVNNNAAAVLLALNTLA-KGKEVIVSRGELVEIGGSFRIPDVMR-QSGARLVEVGTTN----RTHLSDYEKAIT 134 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccc-cccccccccccccccccccccccccc-ccccccccccccc----cccccccccccc
Confidence 46678888888889999988886 45567766432 222 445666 7899999998632 346788999999
Q ss_pred HHHHcCCceeEEEEeCCCCC--cccCCCHHHHHHHHHHHHhcCcEEEEeccccccc----cCCCCcchhhhhhhccccCC
Q 019899 90 QARKRGVKVRGILICNPANP--VGNIIPRETLYELLDFAREKNIHVISDEIYGGSI----FGNEEFVSMAEILEAEEVDK 163 (334)
Q Consensus 90 ~~~~~~~~~~~i~~~~p~np--tG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 163 (334)
+ ++.+++..+++|- .|+.-.. .++++.+++++|++++++|-.-+.+. |+-..-.++.... ..
T Consensus 135 e------~Ta~ll~Vh~Sn~~i~GFt~~~-~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~-----~~ 202 (367)
T PF03841_consen 135 E------NTAALLKVHTSNFRIQGFTGEV-SLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYL-----AA 202 (367)
T ss_dssp ---------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CC-----CC
T ss_pred c------cccccccccccccccccccccc-cHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHh-----hc
Confidence 8 8999999998774 3433222 38999999999999999997643221 1100112333333 26
Q ss_pred CcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh--cccCCChHHHHHHHHhhCCh---HH------HHHHHHHHH
Q 019899 164 DRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT--RFCSISAPTQRLLISMLSDT---KF------IQEYLETNK 232 (334)
Q Consensus 164 ~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~---~~------~~~~~~~~~ 232 (334)
+.++++.|-.|.+|.| ..|.|++ ++++++.+++.. ..+...-....++.+.++.. +. ....+....
T Consensus 203 GaDlV~fSGdKlLGGP--QaGiI~G-kk~lI~~lk~~pl~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~ 279 (367)
T PF03841_consen 203 GADLVTFSGDKLLGGP--QAGIIVG-KKELIEKLKKHPLGRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSL 279 (367)
T ss_dssp T-SEEEEETTSSSSS---S-EEEEE-EHHHHHHHHHHHHTTT-B--HHHHHHHHHHHHH---------------------
T ss_pred CCCEEEEECCCcCCCC--CeEEEEe-CHHHHHHHhhCCCcceEeeCHHHHHHHHHHHHHHHHhhcccccccccccccccc
Confidence 7889999999999644 4788887 899999998642 33445555555554444321 10 012244555
Q ss_pred HHHHHHHHHHHHHHHhC
Q 019899 233 RRIKKLYDSFVAGLKQL 249 (334)
Q Consensus 233 ~~~~~~~~~~~~~l~~~ 249 (334)
+.++++++.+...|+..
T Consensus 280 ~~L~~rA~~l~~~l~~~ 296 (367)
T PF03841_consen 280 EELRARAERLAAQLKAA 296 (367)
T ss_dssp -----------------
T ss_pred ccccccccccccccccc
Confidence 66667777777776654
No 386
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.88 E-value=1.1e-06 Score=76.56 Aligned_cols=271 Identities=18% Similarity=0.185 Sum_probs=164.0
Q ss_pred CCCCCCcEEEecCcHHHHHHHHHHhc---CCCCeEEecCCCCCChhhhhhhc---cCcEEEEEeCCCCCCccccHHHHHH
Q 019899 13 VSFDPSQIVLTAGATPAVEILCFCLA---DHGNALLVPSPYYPGFDRDIRFR---TGVELIPVHCRSTDNFAFSITALDQ 86 (334)
Q Consensus 13 ~~~~~~~i~~~~g~~~~~~~~~~~l~---~~gd~vl~~~p~~~~~~~~~~~~---~g~~v~~v~~~~~~~~~~~~~~l~~ 86 (334)
.+.+..|.-+-.++|.+-.+++.+.- ++..+|+++..+|+.+.+.++.. .|.+++.++.+ |++++++
T Consensus 133 TGm~VANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-------d~~~l~~ 205 (450)
T COG0403 133 TGLDVANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-------DLDDLES 205 (450)
T ss_pred hCCCcccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-------hhhhhhh
Confidence 34555555666677777777666652 23589999999999999988733 46777777752 6777777
Q ss_pred HHHHHHHcCCceeEEEEeCCCCCcc-cCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCc
Q 019899 87 AFNQARKRGVKVRGILICNPANPVG-NIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDR 165 (334)
Q Consensus 87 ~l~~~~~~~~~~~~i~~~~p~nptG-~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (334)
+ ++ ..+-++++..|+. .| ... +++++.+.++++|.++++=- + .-...-+.+.. +.+.
T Consensus 206 ~-~~-----~~~~gv~vQyP~~-~G~~~~---d~~~l~~~~h~~~al~~v~a---D----plaL~LL~pPG-----e~GA 263 (450)
T COG0403 206 A-DD-----GDVFGVLVQYPNT-FGIVEE---DLRALIEAAHSAGALVIVAA---D----PLALGLLKPPG-----EFGA 263 (450)
T ss_pred c-cc-----cCeEEEEEecCCC-CCccch---hHHHHHHHHhhcCCEEEEEe---c----hhHhhccCCcc-----ccCC
Confidence 7 43 2678899998874 45 444 49999999999999888531 1 00111111111 1788
Q ss_pred EEEEecccc---cCCCCCceEEEEeecCHHHHH----------------------------HHHHhhccc--CCChHHHH
Q 019899 166 VHIIYGLSK---DLSLPGFRTGVIYSYNESVLA----------------------------AAKKLTRFC--SISAPTQR 212 (334)
Q Consensus 166 ~~~~~s~sK---~~~~~g~r~g~i~~~~~~~~~----------------------------~~~~~~~~~--~~~~~~~~ 212 (334)
+|++++..- .+|..|...|+..+ ..++.. .+++-+... +.+.....
T Consensus 264 DIvvG~~QrfGvPmgfGGPhag~fA~-~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA 342 (450)
T COG0403 264 DIVVGSAQRFGVPMGFGGPHAGYFAV-KDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLA 342 (450)
T ss_pred ceEEecCcccCCCcCCCCcceeeeeE-hHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHH
Confidence 888887543 33455677888777 443322 222222222 11111111
Q ss_pred HHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCcccCCCceeE--EeeecCCcCCCCChhhHHHHHHHHHHh
Q 019899 213 LLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL--GIRCSESSAGLY--CWADMSGLIPSYSEKGELELWDKLLNI 288 (334)
Q Consensus 213 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--g~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~ll~~ 288 (334)
.++.+... -+..+-+.+...+..+...++.+.|++. |+++... .+| +.++++.. ....+..+ ...
T Consensus 343 ~~As~y~~-~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~--~fFdt~~v~~~~~-------~~~~l~~~-~~~ 411 (450)
T COG0403 343 LAASMYAV-YHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFD--HFFDTFTVRVPEE-------VAEALLAA-AIA 411 (450)
T ss_pred HHHHHHHH-HhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccc--cceeeEEEecchh-------HHHHHHHH-HHh
Confidence 11111111 1124557888899999999999999965 5776554 444 33455531 22344555 334
Q ss_pred cCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHH
Q 019899 289 AKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVA 330 (334)
Q Consensus 289 ~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~ 330 (334)
.|+.+..-. ++.+-+++.. .++++++.+++.+....
T Consensus 412 ~G~~L~~~~------~~~~~ia~tEt~t~~~i~~l~~~~~~~~ 448 (450)
T COG0403 412 GGINLRRVD------ADTVLIALTETTTKEDIDALVAAFGGVN 448 (450)
T ss_pred cCCceeeec------CCceEEEeecccCHHHHHHHHHHHhhhc
Confidence 677765322 3356677775 47889999988887653
No 387
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=98.67 E-value=2.7e-06 Score=72.24 Aligned_cols=221 Identities=14% Similarity=0.163 Sum_probs=127.5
Q ss_pred cccHHHHHHHHHHHHHcCCceeEEEEeCC-CCCcccCC-CHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcc-hhhh
Q 019899 78 AFSITALDQAFNQARKRGVKVRGILICNP-ANPVGNII-PRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFV-SMAE 154 (334)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~~~~~~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~-~~~~ 154 (334)
+-+++++++.|..+.+....+. .+++.| +...|.-. +.+=.+.+.++|++|++.+|+||++.+..-+|.-.. ....
T Consensus 252 ~~Cl~~Ve~li~~~~~k~~pVa-aiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~ 330 (484)
T KOG1405|consen 252 QGCLAEVEDLIVKYRKKKKPVA-AIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWN 330 (484)
T ss_pred hhHHHHHHHHHHHHhhcCCCeE-EEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcC
Confidence 4578999999998876654455 455556 77777644 566689999999999999999999976544333111 1222
Q ss_pred hhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHH-HHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHH
Q 019899 155 ILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAA-AKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKR 233 (334)
Q Consensus 155 ~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 233 (334)
+. ...+ +.+|||-+- .| ||.. +++++-. -.+....|.+.+.-...+.+.++... + +.+.+
T Consensus 331 l~------~PpD--~vTFSKK~q-~g---Gffh--~~~frpn~pYrifNTWmGdP~k~lll~~vv~~I~--~---~~Ll~ 391 (484)
T KOG1405|consen 331 LD------SPPD--VVTFSKKFQ-TG---GFFH--DEEFRPNEPYRIFNTWMGDPSKNLLLEEVVQEIK--R---EDLLN 391 (484)
T ss_pred CC------CCcc--ceehhhhhh-cC---cccc--CcccCCCchHHHhhhhcCChHHHHHHHHHHHHHh--H---HHHHH
Confidence 22 2222 336888884 44 5433 4444321 22333444444444444444443221 1 22333
Q ss_pred HHHHHHHHHHHHHHhC----C--CcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeE
Q 019899 234 RIKKLYDSFVAGLKQL----G--IRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWF 307 (334)
Q Consensus 234 ~~~~~~~~~~~~l~~~----g--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~i 307 (334)
.....-..+..+|.++ + +.-....+. |+.+++|... ....++.. ++.+|+.+-. || ...+
T Consensus 392 n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGT-F~a~d~ps~~------~Rdk~i~~-~~~nGv~~GG---Cg---~~si 457 (484)
T KOG1405|consen 392 NVAHVGKALLKGLLELQAKYPGKINNLRGRGT-FIAWDCPSGS------IRDKLILI-ARLNGVNLGG---CG---DKSI 457 (484)
T ss_pred HHHHHHHHHHHHHHHHHHhCchhhhcccccce-EEEEeCCChH------HHHHHHHH-HHHcCceecc---cc---ccee
Confidence 3344445555555543 1 333344444 5556887642 22345555 6668888743 22 4567
Q ss_pred EEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 308 RCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 308 Ri~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
|+..+- .++...+-+++++.+++..
T Consensus 458 RfRPsLvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 458 RFRPSLVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred eeccceeehhhhHHHHHHHHHHHhcc
Confidence 776553 4788888899999988764
No 388
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.57 E-value=1.3e-05 Score=68.80 Aligned_cols=284 Identities=14% Similarity=0.127 Sum_probs=160.7
Q ss_pred hhhhhhcCCCCCCCC-cEEEec-CcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCc--EEEEEeCCC-CCCcc
Q 019899 4 FMSQVLGQAVSFDPS-QIVLTA-GATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGV--ELIPVHCRS-TDNFA 78 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~-~i~~~~-g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~--~v~~v~~~~-~~~~~ 78 (334)
-+++.++ + +.+ +|.+.+ |+|.....+...|+.++..-.+....|.....-.....+. .+....... ..+.-
T Consensus 58 ~lreLl~--i--Pd~Y~VlflqGGat~qf~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~i 133 (365)
T COG1932 58 DLRELLN--I--PDDYKVLFLQGGATGQFAMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSI 133 (365)
T ss_pred HHHHHhC--C--CCCceEEEEcCccHHHHHHHHHhhhcccCceeEeeeehhHhHHHHHHHhcccccccccceeccCccCC
Confidence 4555544 4 444 455555 5688888888888765532133344444332222213332 222222111 12222
Q ss_pred ccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhc
Q 019899 79 FSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEA 158 (334)
Q Consensus 79 ~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~ 158 (334)
.+++.+. +.+ +...|.+|.-.+-+|+-++. ...+. .+.+++.|-.-.-+. ...++.
T Consensus 134 P~~~~~~--~~~------~~ayv~~~~NeTi~Gv~v~~--~p~~~-----~~~~~v~D~SS~ils----r~iDvs----- 189 (365)
T COG1932 134 PDLSKWD--FSD------NDAYVHFCWNETISGVEVPE--LPDIG-----SDGLLVADASSAILS----RPIDVS----- 189 (365)
T ss_pred CChhhcc--cCC------CccEEEEecCCcccceEccC--CCCCC-----CCceEEEecccHHhc----CCCChh-----
Confidence 3443333 222 33347777666788887761 22221 127788896633322 223332
Q ss_pred cccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh------------cccCCChHHHHHHHHhhCChHHHHH
Q 019899 159 EEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT------------RFCSISAPTQRLLISMLSDTKFIQE 226 (334)
Q Consensus 159 ~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~~~~~~ 226 (334)
+..++-.+.-|.+|..| ++.++. +++++++++... ....-|++...+...+....+|+..
T Consensus 190 -----k~dviyagaQKnlGpaG--ltvvIv-r~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~ 261 (365)
T COG1932 190 -----KYDVIYAGAQKNLGPAG--LTVVIV-RPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKS 261 (365)
T ss_pred -----HcceEEEehhhccCccc--eEEEEE-cHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHH
Confidence 33455678999999788 888888 888888876531 1112355555555555444455444
Q ss_pred H--HHHHHHHHHHHHHHHHHHHHhCCCcc--c--CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcC
Q 019899 227 Y--LETNKRRIKKLYDSFVAGLKQLGIRC--S--ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACH 300 (334)
Q Consensus 227 ~--~~~~~~~~~~~~~~~~~~l~~~g~~~--~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~ 300 (334)
. ++.+.++-.++++.+.+.+.+.+|.. . ....-+-+.+.+.+. +-+..+... ++++|+...-|+.
T Consensus 262 ~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~~~RS~mnV~f~~~~~------~ld~~fv~e-ae~~gl~~lkGhr-- 332 (365)
T COG1932 262 QGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAKANRSRMNVTFTLVDA------ELDKGFVAE-AEAAGLIYLKGHR-- 332 (365)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHhCCccccccchhhccceeEEEEcCcH------HHHHHHHHH-HHHcCCceecccc--
Confidence 3 46667777788899999998875532 1 223344455555532 223456666 4446666555542
Q ss_pred CCCCCeEEEEecC-CCcccHHHHHHHHHHHHHHcC
Q 019899 301 CIEPGWFRCCFTS-LTHEDIPLVIERIQKVAETCK 334 (334)
Q Consensus 301 ~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~~ 334 (334)
..+.+|+++.+ ++.++++.+++-+..+.++++
T Consensus 333 --~vgGmRasiynA~~~e~veaL~~fm~~f~~~~~ 365 (365)
T COG1932 333 --SVGGLRASIYNAVPLEDVEALTDFMDWFEETYK 365 (365)
T ss_pred --CCCceeeeeecCCCHHHHHHHHHHHHHHHHhhC
Confidence 24559999986 699999999999999888764
No 389
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=98.57 E-value=9e-08 Score=73.82 Aligned_cols=53 Identities=55% Similarity=0.975 Sum_probs=47.7
Q ss_pred ChhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCC
Q 019899 1 MAGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPG 53 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~ 53 (334)
+|+|+.++++..+.+++++|++|+|+++++..++.+++++||.|++++|.|+.
T Consensus 101 iA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 101 IANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred HHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 57889888775566889999999999999999999999999999999999974
No 390
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.54 E-value=1.2e-05 Score=78.37 Aligned_cols=262 Identities=15% Similarity=0.138 Sum_probs=151.7
Q ss_pred CCCCCcEEEecCcHHHHHHHHHHh-c--CCCCeEEecCCCCCChhhhhhhc---cCcEEEEEeCCCCCCccccHHHHHHH
Q 019899 14 SFDPSQIVLTAGATPAVEILCFCL-A--DHGNALLVPSPYYPGFDRDIRFR---TGVELIPVHCRSTDNFAFSITALDQA 87 (334)
Q Consensus 14 ~~~~~~i~~~~g~~~~~~~~~~~l-~--~~gd~vl~~~p~~~~~~~~~~~~---~g~~v~~v~~~~~~~~~~~~~~l~~~ 87 (334)
+.+..|.-+-.++|.+-.+++.+. . ++..+|+++.-.|+.+...++.. .|.+++. +++++.
T Consensus 138 Gm~vaNASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-------------~~~~~~ 204 (954)
T PRK12566 138 GLDLANASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-------------DAVDNL 204 (954)
T ss_pred CchhhhhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-------------cchhhc
Confidence 344444445556665555444443 1 22568999999999888877622 4555553 223333
Q ss_pred HHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEE
Q 019899 88 FNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVH 167 (334)
Q Consensus 88 l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (334)
+.+ ++.++++.+|++ .|.+.+ ++++.+++++.|.+++ +.+. .+. ..-+.+.. +.+.+|
T Consensus 205 ~~~------~~~~v~vq~P~~-~G~i~d---~~~i~~~~h~~gal~~-~~~d-~la-----L~ll~~Pg-----e~GADI 262 (954)
T PRK12566 205 AAH------AVFGALLQYPDT-HGEIRD---LRPLIDQLHGQQALAC-VAAD-LLS-----LLVLTPPG-----ELGADV 262 (954)
T ss_pred CCC------CEEEEEEECCCC-ceEEcc---HHHHHHHHHHcCCEEE-EEeC-HHH-----HhCCCChh-----hcCCcE
Confidence 332 577888999974 688866 9999999999999876 3321 111 11111111 167778
Q ss_pred EEec---ccccCCCCCceEEEEeecCHHHHHHH----------------------------HHhhccc--CCChHHHHHH
Q 019899 168 IIYG---LSKDLSLPGFRTGVIYSYNESVLAAA----------------------------KKLTRFC--SISAPTQRLL 214 (334)
Q Consensus 168 ~~~s---~sK~~~~~g~r~g~i~~~~~~~~~~~----------------------------~~~~~~~--~~~~~~~~~~ 214 (334)
++++ |+=.+|..|...|++.+ .+++...+ ++.+... +.+......+
T Consensus 263 ~vG~~Q~fGvp~~~GGP~ag~~a~-~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~ 341 (954)
T PRK12566 263 VLGSTQRFGVPMGYGGPHAAYFAC-RDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANI 341 (954)
T ss_pred EeeCCCcCCCCCCCCCCCeeeeee-hHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHH
Confidence 7763 33344455667888887 44443322 2222221 1111111111
Q ss_pred HHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEc
Q 019899 215 ISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVT 294 (334)
Q Consensus 215 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~ 294 (334)
+.++... +..+-+.+..++...++.++.+.|++.|+++... .||--+.+.-.. ...++..+ ..+.||.++
T Consensus 342 a~~Y~~~-~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g~~~~~~--~fF~~~~v~~~~------~~~~~~~~-a~~~~~n~r 411 (954)
T PRK12566 342 AGFYAVY-HGPEGLKRIAQRVHRLTAILAAGLEAKGIKRLNR--HFFDTLTLEVGG------AQAAIIES-AEAARINLR 411 (954)
T ss_pred HHHHHHH-hChHHHHHHHHHHHHHHHHHHHHHHhcCCccccC--CccceEEEEccC------CHHHHHHH-HHHCCCeeE
Confidence 1111111 1244567778888899999999999999887544 444322222110 13466666 444788876
Q ss_pred CCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHH
Q 019899 295 PGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQ 327 (334)
Q Consensus 295 ~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~ 327 (334)
-- .++.+.+|+.. .+++|+..+++.+.
T Consensus 412 ~~------~~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 412 IL------GRGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred Ee------CCCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 42 23567888886 58889998888874
No 391
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.49 E-value=7e-06 Score=68.35 Aligned_cols=151 Identities=21% Similarity=0.273 Sum_probs=105.4
Q ss_pred CcHHHHHHHHHHhcCCCCeEEecCCC-CCChhh----------hhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 25 GATPAVEILCFCLADHGNALLVPSPY-YPGFDR----------DIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 25 g~~~~~~~~~~~l~~~gd~vl~~~p~-~~~~~~----------~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
++|+|+..++..+++|||+.+..... |....+ ++. ..|.....+|+ ..+..+|++.++..+++
T Consensus 91 sGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~-dfgi~Y~~v~L--t~~gkiD~~~v~~~i~~--- 164 (416)
T COG4100 91 SGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGSLK-DFGIKYKAVPL--TADGKIDIQAVKTAISD--- 164 (416)
T ss_pred cchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCcccHH-HhCcceeeccc--ccCCcccHHHHHHhcCc---
Confidence 46779999999999999998776543 222222 222 35677778887 44568999999999997
Q ss_pred cCCceeEEEEeCC-CCCcccCCCHHHHHHHHHHHHh--cCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEe
Q 019899 94 RGVKVRGILICNP-ANPVGNIIPRETLYELLDFARE--KNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIY 170 (334)
Q Consensus 94 ~~~~~~~i~~~~p-~nptG~~~~~~~l~~i~~~~~~--~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (334)
++|+|.+.-. ....--.++.+++++++.+.++ .++.+++|++|+.|.=...+ .. -+.++..+
T Consensus 165 ---~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~~EP-t~-----------vGaDliAG 229 (416)
T COG4100 165 ---RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEEKEP-TH-----------VGADLIAG 229 (416)
T ss_pred ---cceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhccCc-cc-----------cchhhhcc
Confidence 8998777654 2222235788889999998877 48999999999987632211 11 35556778
Q ss_pred cccccCCCCCc--eEEEEeecCHHHHHHHH
Q 019899 171 GLSKDLSLPGF--RTGVIYSYNESVLAAAK 198 (334)
Q Consensus 171 s~sK~~~~~g~--r~g~i~~~~~~~~~~~~ 198 (334)
|+-|.-| .|+ -.||+.. +.++.+...
T Consensus 230 SLIKNpG-GgiaktGGYiaG-k~~~ve~~~ 257 (416)
T COG4100 230 SLIKNPG-GGIAKTGGYIAG-KAELVEAAA 257 (416)
T ss_pred ceeeCCC-Cceeeccceeec-hHHHHHhhc
Confidence 8888765 332 2367776 778877764
No 392
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.28 E-value=7.5e-05 Score=68.57 Aligned_cols=256 Identities=14% Similarity=0.120 Sum_probs=149.5
Q ss_pred eEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHH
Q 019899 43 ALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYEL 122 (334)
Q Consensus 43 ~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i 122 (334)
..++|.-.|+....++. .+|.+|++|.+ ..+..+|+.+|+...+++ ..+..++.++.|++- |.. ++.++++
T Consensus 632 vClIPvSAHGTNPASA~-MagmkvvpV~~--~~~G~id~~dLk~kaekh---~~~Laa~MvTYPST~-Gvf--E~~i~d~ 702 (1001)
T KOG2040|consen 632 VCLIPVSAHGTNPASAA-MAGMKVVPVGC--DANGNIDMVDLKAKAEKH---KDNLAALMVTYPSTH-GVF--EEGIDDI 702 (1001)
T ss_pred eEEEeecccCCChhhHH-hcCCEEEEeec--cCCCCccHHHHHHHHHHh---hhhhheeEEeccccc-ccc--cccHHHH
Confidence 56788888888888888 89999999998 456689999999877654 236778899988653 332 4459999
Q ss_pred HHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEecccccCCCC----CceEEEEeecCHHHHHHHH
Q 019899 123 LDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLP----GFRTGVIYSYNESVLAAAK 198 (334)
Q Consensus 123 ~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~----g~r~g~i~~~~~~~~~~~~ 198 (334)
+++.++||--|..|.+--. ..+.+-... +.+.++.=-.++|+|++| |..+|=|.. .+.+...+.
T Consensus 703 cd~iHehGGQVYlDGANMN------AqVGlc~pG-----d~GaDV~HLNLHKTFcIPHGGGGPg~gPIgV-K~HLapfLP 770 (1001)
T KOG2040|consen 703 CDIIHEHGGQVYLDGANMN------AQVGLCRPG-----DIGADVCHLNLHKTFCIPHGGGGPGMGPIGV-KKHLAPFLP 770 (1001)
T ss_pred HHHHHhcCCEEEecCCCcc------ceecccCCc-----cccccceeecccceeeecCCCCCCCCCccch-hhhccccCC
Confidence 9999999999999987321 011111111 134444445789998644 344554554 444433332
Q ss_pred Hhh------------------cccCCCh--HHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc
Q 019899 199 KLT------------------RFCSISA--PTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSA 258 (334)
Q Consensus 199 ~~~------------------~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 258 (334)
.+. .+|+.+. +...+-..++-... +..-.....-+++++..+|+.+--.++..+.
T Consensus 771 ~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~G-----L~~as~~AiLNaNYMakRLe~hYkil~~~~~ 845 (1001)
T KOG2040|consen 771 SHPVVSPGRPEDTSPVGSVSAAPWGSALILPISWAYIKMMGSGG-----LKDASKIAILNANYMAKRLESHYKILFRGEN 845 (1001)
T ss_pred CCCccCCCCCCCCCCccceeccCCCcceeehhHHHHHHHhcccc-----cchhhHHHhhhhHHHHHHHhhccceeEecCC
Confidence 211 1122111 11222333332221 1223334456788999999886323333334
Q ss_pred eeE---EeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHH
Q 019899 259 GLY---CWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKV 329 (334)
Q Consensus 259 g~~---~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~ 329 (334)
|.. +.+++.+.... ....+.+++++ |.++|.-...-+ +. -.+.+-|-... -+.++++++.+++-.+
T Consensus 846 ~~vaHEFIlD~r~fK~~-agieavDvAKR-L~DYgFHaPTms-wP--V~gtLMIEPTESE~k~ElDRfcdAliSI 915 (1001)
T KOG2040|consen 846 GLVAHEFILDLRPFKKT-AGIEAVDVAKR-LMDYGFHAPTMS-WP--VAGTLMIEPTESEDKAELDRFCDALISI 915 (1001)
T ss_pred cceeeeeeeechhhccc-cCCcHHHHHHH-HHhccCCCCccc-cc--cCCceEeccCccccHHHHHHHHHHHHHH
Confidence 432 22454443222 22345788888 566888753333 32 24556565542 3556788888877654
No 393
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=98.24 E-value=4.3e-05 Score=62.63 Aligned_cols=273 Identities=15% Similarity=0.199 Sum_probs=135.2
Q ss_pred EEecCCCCCChhhhhhhccCcEEEEEe-CCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHH
Q 019899 44 LLVPSPYYPGFDRDIRFRTGVELIPVH-CRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYEL 122 (334)
Q Consensus 44 vl~~~p~~~~~~~~~~~~~g~~v~~v~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i 122 (334)
|+-+.-.-.+....+- ..|.+++-+. +.+.+...-|++.++..+++. +...|++.+..+..=..-+++.+++|
T Consensus 106 iiw~ridqks~~ksi~-~agfepiiie~i~d~d~l~tdleav~~~iee~-----g~dcilci~sttscfapr~pd~leai 179 (432)
T KOG3843|consen 106 IIWLRIDQKSCFKSII-HAGFEPIIIENILDGDELITDLEAVEAIIEEL-----GEDCILCIHSTTSCFAPRSPDNLEAI 179 (432)
T ss_pred EEEEecchHHHHHHHH-hcCCCceeeeccccchHHHHhHHHHHHHHHHh-----CCceEEEEeecccccCCCCCchHHHH
Confidence 4434333344455555 6788876665 333444556899999999886 66666666554433334466789999
Q ss_pred HHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCc-EEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh
Q 019899 123 LDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDR-VHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT 201 (334)
Q Consensus 123 ~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~ 201 (334)
..+|..|+++-|+..+|+.-. .....-+..... -++ +.++.|+.|.|-.| ...+.+.+-++..++.+.+.-
T Consensus 180 aaica~~diphivnnayglqs--ee~i~~iaa~~~-----~grida~vqsldknf~vp-vggaiia~fk~n~iq~iak~y 251 (432)
T KOG3843|consen 180 AAICAAHDIPHIVNNAYGLQS--EECIHKIAAAAE-----CGRIDAFVQSLDKNFMVP-VGGAIIAAFKDNFIQEIAKMY 251 (432)
T ss_pred HHHHHccCchhhhccccccch--HHHHHHHHHHhh-----hccHHHHHHHhhhcceee-cchhHhhHhHHHHHHHHHHhC
Confidence 999999999999999997511 111111111111 233 34567999988433 222233333556666665432
Q ss_pred cccCCChHHHHHHHHhhCChH-HHHHHHHHHHHHHHHHHHHHHHHHHhCCCcc-cCCCceeEEeeecCCcCCCCChhhHH
Q 019899 202 RFCSISAPTQRLLISMLSDTK-FIQEYLETNKRRIKKLYDSFVAGLKQLGIRC-SESSAGLYCWADMSGLIPSYSEKGEL 279 (334)
Q Consensus 202 ~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~ 279 (334)
..-..+.++.-.+..++..++ ...+.+.+.++-+...++.+...-+..|-.+ ..|++...+.+.+... +.. ...+.
T Consensus 252 pgrasa~ps~dllitll~~gqn~f~e~~~eqkemf~~l~~ki~~~ae~~~e~l~~~p~n~is~amtl~ti-~~~-k~kav 329 (432)
T KOG3843|consen 252 PGRASASPSLDLLITLLSLGQNAFKELFGEQKEMFLKLRNKIIKFAEAIGECLLETPENEISLAMTLKTI-DEA-KDKAV 329 (432)
T ss_pred CCccccCccHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCchhhhhhhhccC-ChH-HhhHH
Confidence 221222333333444443322 1122333334434334443333333333222 2344433322222211 110 11122
Q ss_pred HHHHHHHHhcCe---EEcCCCCc------------CCC--C--CCeEEEEec-CCCcccHHHHHHHHHHHHHH
Q 019899 280 ELWDKLLNIAKI---NVTPGSAC------------HCI--E--PGWFRCCFT-SLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 280 ~~~~~ll~~~gi---~v~~g~~~------------~~~--~--~~~iRi~~~-~~~~~~l~~~l~~l~~~~~~ 332 (334)
.+.-.+|-..|| .+.|.+.. ++. . -+|+-+.+. ..++.|++++..+|...+++
T Consensus 330 t~~gsilfak~isgarvv~~~q~kttieg~ef~~f~sht~e~~~~yln~a~aigm~~hdld~~~~rl~~~~a~ 402 (432)
T KOG3843|consen 330 TLFGSILFAKGISGARVVPLGQMKTTIEGCEFIGFGSHTNEQHCAYLNAACAIGMKDHDLDEFFNRLDRCLAA 402 (432)
T ss_pred HHHHHHHHhccccCceEeeccccceeeeceEEeccccccCcCchhHhhHHHhcCCcHhHHHHHHHHHHHHHHH
Confidence 333333333555 34443321 110 0 123443333 15778899999888877654
No 394
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.03 E-value=0.031 Score=52.11 Aligned_cols=265 Identities=17% Similarity=0.195 Sum_probs=138.2
Q ss_pred CCCCCCcEEEecCcHHHHHHHHHH-hcCCCCeEEecCCCCCChhhhhhhcc---CcEEEEEeCCCCCCccccHHHHHHHH
Q 019899 13 VSFDPSQIVLTAGATPAVEILCFC-LADHGNALLVPSPYYPGFDRDIRFRT---GVELIPVHCRSTDNFAFSITALDQAF 88 (334)
Q Consensus 13 ~~~~~~~i~~~~g~~~~~~~~~~~-l~~~gd~vl~~~p~~~~~~~~~~~~~---g~~v~~v~~~~~~~~~~~~~~l~~~l 88 (334)
.+.+-.+.-+-.-+|.+-.+...+ -.+++.+++++..+|+.....++.+. |.+++.. |+++...-
T Consensus 176 TGL~~aNASLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~----------~~~~~~~s- 244 (1001)
T KOG2040|consen 176 TGLPMANASLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVS----------DIKEADYS- 244 (1001)
T ss_pred cCCcccchhhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhhccccccceeEEec----------CHHHhhcc-
Confidence 344444443434344444433333 34577789999999999888877333 3332222 22222211
Q ss_pred HHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEE
Q 019899 89 NQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHI 168 (334)
Q Consensus 89 ~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (334)
.+....+++..|.. -|.+.+ ..++++.+++.+.++++-.- .+. ..-+.+.. +.+.++.
T Consensus 245 ------~~~v~gvlvQYP~t-~G~i~d---~~el~~~a~~~~s~vv~atD--LLa-----LtiLrpPg-----efGaDIa 302 (1001)
T KOG2040|consen 245 ------SKDVSGVLVQYPDT-EGSVLD---FDELVELAHANGSLVVMATD--LLA-----LTILRPPG-----EFGADIA 302 (1001)
T ss_pred ------ccceeEEEEEcCCC-CCcccC---HHHHHHHhhccCceEEEeeh--hhH-----HHccCChh-----hcCceee
Confidence 12567788888865 588888 77788888888888774321 000 01111111 1677788
Q ss_pred EecccccCCCC----CceEEEEee--------------------cCHHHHHHHHHh----h-cccCCChHHHHHH----H
Q 019899 169 IYGLSKDLSLP----GFRTGVIYS--------------------YNESVLAAAKKL----T-RFCSISAPTQRLL----I 215 (334)
Q Consensus 169 ~~s~sK~~~~~----g~r~g~i~~--------------------~~~~~~~~~~~~----~-~~~~~~~~~~~~~----~ 215 (334)
++|... ||+| |...|+..+ .++.++-.+... + .-.+.|.-...++ +
T Consensus 303 vGSsQR-FGVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNICTAQALLANma 381 (1001)
T KOG2040|consen 303 VGSSQR-FGVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNICTAQALLANMA 381 (1001)
T ss_pred eccccc-cCccccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhccchhhhHHHHHHHHHH
Confidence 877443 4422 211121111 011222111110 0 0111121111111 1
Q ss_pred HhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcC
Q 019899 216 SMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTP 295 (334)
Q Consensus 216 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~ 295 (334)
+.+.-. +..+.+++..+++....-.+.+.|+..|-++.... ||-.+++.... ..+++..+.++ .+|.++-
T Consensus 382 AmyaiY-HGp~gL~~IArrvh~~T~~l~~~l~~aghel~~k~--fFDTLkI~~~~------s~~~~l~rA~~-~~iNlr~ 451 (1001)
T KOG2040|consen 382 AMYAIY-HGPHGLKEIARRVHNLTLILAEGLKNAGHELQHKP--FFDTLKIRCGC------SAEEVLDRAAK-RQINLRL 451 (1001)
T ss_pred HHHhhh-cCcHHHHHHHHHHHHHHHHHHHHHhhcchhhcccc--ccceEEEEecC------cHHHHHHHHHh-hcCceEE
Confidence 111110 11344677778888888899999998886665543 55444443221 24567777444 5676542
Q ss_pred CCCcCCCCCCeEEEEecC-CCcccHHHHHHHHH
Q 019899 296 GSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQ 327 (334)
Q Consensus 296 g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~ 327 (334)
-+++.+-+++.. ++++|++.++..+.
T Consensus 452 ------~ed~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 452 ------VEDGTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred ------eecCceEEeecccccHHHHHHHHHHHc
Confidence 135667788875 58889998887764
No 395
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=95.85 E-value=0.36 Score=40.71 Aligned_cols=281 Identities=11% Similarity=0.105 Sum_probs=150.1
Q ss_pred hhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc--CCC---CeEEecCCCCCChhhhhhhccCcEEEEEeCCC-CCCc
Q 019899 4 FMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLA--DHG---NALLVPSPYYPGFDRDIRFRTGVELIPVHCRS-TDNF 77 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~--~~g---d~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~-~~~~ 77 (334)
.+++.++ ++-+-+-+++..|+|....++...|+ +.| |-|+.-.++-.++.++-+ ......+..+..+ ..+-
T Consensus 60 ~lreLln--iPdn~~vlf~QGGGt~qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk-~~~~~~V~~~~k~y~ygk 136 (370)
T KOG2790|consen 60 LLRELLN--IPDNYKVLFLQGGGTGQFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEAKK-YGTPNIVIPKLKSYTYGK 136 (370)
T ss_pred HHHHHHc--CCCceeEEEEeCCCcccccccchhhhccccCCccceEEeccccHHHHHHHHh-hCCceEEeccccccccCc
Confidence 4566555 54333345555567777777766665 444 667766666666766655 4334344444321 1112
Q ss_pred cccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhh
Q 019899 78 AFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILE 157 (334)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~ 157 (334)
-.|.+.++.- .+.+.+++|.-.+..|+-++.-- +-.-+|..++.|-. +.|.- .+...
T Consensus 137 vPd~~~w~~~--------~da~yvyyCaNETVHGVEf~~~P------~~~~~~~vlVaDmS-SnflS---rpvDv----- 193 (370)
T KOG2790|consen 137 VPDPSTWELN--------PDASYVYYCANETVHGVEFDFIP------VNDPKGAVLVADMS-SNFLS---RPVDV----- 193 (370)
T ss_pred CCChhhcccC--------CCccEEEEecCceeeceecCCCC------CCCCCCceEEEecc-cchhc---CCccc-----
Confidence 2344444431 24457888877667787665111 11335778888865 22221 12222
Q ss_pred ccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh-------------hccc-CCChHHHHH---HHHhhC-
Q 019899 158 AEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL-------------TRFC-SISAPTQRL---LISMLS- 219 (334)
Q Consensus 158 ~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~-------------~~~~-~~~~~~~~~---~~~~l~- 219 (334)
.+-.+++.+..|-+|.+|+ -.++. +++++...... .+.+ +++..+.++ ..+++.
T Consensus 194 -----sk~gvi~aGAQKN~G~aG~--Tvviv-r~dllg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~ 265 (370)
T KOG2790|consen 194 -----SKFGVIFAGAQKNVGPAGV--TVVIV-RKDLLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILE 265 (370)
T ss_pred -----hhcceEEeccccccCcccc--EEEEE-ehhhhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHh
Confidence 2333566788999998874 44555 45554433221 1112 222222222 222222
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccC--C--CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEc
Q 019899 220 DTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSE--S--SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVT 294 (334)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~--~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~ 294 (334)
.+. +..+.+.-.+....+.+.+.+. ||-..+ | ..-|-+.+++.+. +-..++.....+++-+-+.
T Consensus 266 ~GG-----l~a~e~~n~~KskllYd~iD~s~gfy~cpVe~~~RS~MNV~Fri~~d------~Le~eFLkeA~~~~mv~LK 334 (370)
T KOG2790|consen 266 KGG-----LAAMEKLNQEKSKLLYDAIDNSNGFYRCPVEPSVRSRMNVPFRIEKD------ELEAEFLKEAAKEHMVQLK 334 (370)
T ss_pred ccc-----HHHHHHHHHHHHHHHHHHHHhcCCeEEcccchhhhhhcccceeecch------HHHHHHHHHHHHhhhhccc
Confidence 221 3445555667778888888775 554321 1 1222233344321 2224666665565445544
Q ss_pred CCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHHcC
Q 019899 295 PGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAETCK 334 (334)
Q Consensus 295 ~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~~ 334 (334)
|+. +-+.+|.|+-+ ++-+++.++++-++++.++|.
T Consensus 335 -GhR----SVGGiRASlYNAisv~~~q~L~~~m~~F~k~h~ 370 (370)
T KOG2790|consen 335 -GHR----SVGGIRASLYNAISVEEVQKLAAFMKEFQKKHA 370 (370)
T ss_pred -ccc----ccccchhhhhccccHHHHHHHHHHHHHHHHhcC
Confidence 332 23569999875 799999999999999988763
No 396
>PLN02672 methionine S-methyltransferase
Probab=92.80 E-value=1.7 Score=44.45 Aligned_cols=188 Identities=15% Similarity=0.127 Sum_probs=106.8
Q ss_pred ChhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc------CCCCeEEecCCCCCChhhhhhh-------ccC--cE
Q 019899 1 MAGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLA------DHGNALLVPSPYYPGFDRDIRF-------RTG--VE 65 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~------~~gd~vl~~~p~~~~~~~~~~~-------~~g--~~ 65 (334)
||.|++...+ +++++++|++.++-..|+.-+++.+. ..+..-.+ ...+..++.. ..+ .+
T Consensus 435 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 508 (1082)
T PLN02672 435 IAGFMRIYHH--IPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWL----PKKWLTSLAIENATSDSKSDDVIT 508 (1082)
T ss_pred HHHHHHHhcC--CcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhhccC----CHHHHhHhhhhcccccCccCCeEE
Confidence 4678888777 89999999999999999977776653 22311111 1122222220 111 22
Q ss_pred EEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccc-ccc
Q 019899 66 LIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGG-SIF 144 (334)
Q Consensus 66 v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~-~~~ 144 (334)
|+.-|- ..+.+.+.+++. ++++|+..-.... -.+....+.|.+.+++-|.+++.|..-.. +.-
T Consensus 509 ~~~~~~--------~~~~~~~~~~~~-----~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (1082)
T PLN02672 509 VIEAPR--------QSDLVIELIKKL-----KPQVVVTGMADFE---MRTSTAFEHLLNVTAEIGARLFLDISDHLELSS 572 (1082)
T ss_pred EEeCCC--------cchHHHHHHHhC-----CCeEEEEeccchh---hhhHHHHHHHHHHHHhhCcEEEEehhhheeecc
Confidence 222221 123566777775 7886655444432 23445689999999999999999987322 221
Q ss_pred CCCCcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHH
Q 019899 145 GNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQR 212 (334)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~ 212 (334)
.+..-....+.....+ +....++-++-|.-=.+.+-+.+++.-++.+...+.+-.. .+..+.++|+
T Consensus 573 -~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (1082)
T PLN02672 573 -LPGSNGVLKYLAGHPL-PSHAAIICGLVKNQVYSDLEVAFVISENEAVLKALSKTGEVLEGRTAIISQF 640 (1082)
T ss_pred -CCCcccHHHHhcCCCC-CcchhHhhhhhhccccccceEEEEecCcHHHHHHHHHHHHhhccchHHHHHH
Confidence 1122222222221111 2333334455554434889999999877777777765432 2334444544
No 397
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=91.13 E-value=7.4 Score=31.85 Aligned_cols=158 Identities=20% Similarity=0.245 Sum_probs=91.6
Q ss_pred EEEecCcHHHHHHHHHHhcCCCCeEE---ecCC-C---CC---Ch----hhhhhhccCcEEEEEeCCCCCCccccHHHHH
Q 019899 20 IVLTAGATPAVEILCFCLADHGNALL---VPSP-Y---YP---GF----DRDIRFRTGVELIPVHCRSTDNFAFSITALD 85 (334)
Q Consensus 20 i~~~~g~~~~~~~~~~~l~~~gd~vl---~~~p-~---~~---~~----~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~ 85 (334)
+.+-+|+-....++..++ +.|..|. ...| . |. +. ...++ ..|.++++.... ....-.+++|.
T Consensus 4 ~aL~SGGKDS~~Al~~a~-~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae-~~gi~l~~~~~~--g~~e~eve~L~ 79 (223)
T COG2102 4 IALYSGGKDSFYALYLAL-EEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAE-AMGIPLVTFDTS--GEEEREVEELK 79 (223)
T ss_pred EEEEecCcHHHHHHHHHH-HcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHH-hcCCceEEEecC--ccchhhHHHHH
Confidence 678899988877776665 3443321 1111 1 11 11 11233 578888888862 33445788999
Q ss_pred HHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCc
Q 019899 86 QAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDR 165 (334)
Q Consensus 86 ~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (334)
++++.. +..+|+ +|.+++..++..+-.+|++-|+.++ .++|- -.+..-+..+.. .+-
T Consensus 80 ~~l~~l-----~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~-----~PLWg-~d~~ell~e~~~-----~Gf 136 (223)
T COG2102 80 EALRRL-----KVDGIV-------AGAIASEYQKERVERLCEELGLKVY-----APLWG-RDPEELLEEMVE-----AGF 136 (223)
T ss_pred HHHHhC-----cccEEE-------EchhhhHHHHHHHHHHHHHhCCEEe-----ecccC-CCHHHHHHHHHH-----cCC
Confidence 999875 445443 6999999999999999999999876 44441 112223333333 333
Q ss_pred EEEEecccccCCCCCceEEEEee-cCHHHHHHHHHhhcccCCCh
Q 019899 166 VHIIYGLSKDLSLPGFRTGVIYS-YNESVLAAAKKLTRFCSISA 208 (334)
Q Consensus 166 ~~~~~s~sK~~~~~g~r~g~i~~-~~~~~~~~~~~~~~~~~~~~ 208 (334)
-+.+.+.+| .|++. .|+.- -+.+..+.+.+....++.++
T Consensus 137 ~~~Iv~Vsa-~gL~~---~~lGr~i~~~~~e~l~~l~~~ygi~~ 176 (223)
T COG2102 137 EAIIVAVSA-EGLDE---SWLGRRIDREFLEELKSLNRRYGIHP 176 (223)
T ss_pred eEEEEEEec-cCCCh---HHhCCccCHHHHHHHHHHHHhcCCCc
Confidence 344445444 22232 33311 15677777777655555443
No 398
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=85.52 E-value=4.4 Score=35.03 Aligned_cols=69 Identities=16% Similarity=0.241 Sum_probs=42.1
Q ss_pred cCCCCCChhhhhhhc--cCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHH
Q 019899 47 PSPYYPGFDRDIRFR--TGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLD 124 (334)
Q Consensus 47 ~~p~~~~~~~~~~~~--~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~ 124 (334)
.-|+|++..+... . -..-++.+|. ..-++.++++.+. +++.+++.+... +.++-++|.+
T Consensus 50 G~~~y~sv~dlp~-~~~~DlAvi~vp~------~~v~~~l~e~~~~------gvk~avI~s~Gf------~~~~~~~l~~ 110 (291)
T PRK05678 50 GLPVFNTVAEAVE-ATGANASVIYVPP------PFAADAILEAIDA------GIDLIVCITEGI------PVLDMLEVKA 110 (291)
T ss_pred CeeccCCHHHHhh-ccCCCEEEEEcCH------HHHHHHHHHHHHC------CCCEEEEECCCC------CHHHHHHHHH
Confidence 3455666666555 3 3444555552 1234555555554 677766665443 2444568999
Q ss_pred HHHhcCcEEE
Q 019899 125 FAREKNIHVI 134 (334)
Q Consensus 125 ~~~~~~~~vi 134 (334)
+++++|+.++
T Consensus 111 ~a~~~girvl 120 (291)
T PRK05678 111 YLERKKTRLI 120 (291)
T ss_pred HHHHcCCEEE
Confidence 9999999999
No 399
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=82.58 E-value=5.1 Score=30.23 Aligned_cols=60 Identities=20% Similarity=0.264 Sum_probs=44.6
Q ss_pred ccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHH-HHHHHHHHHHhc--CcEEE-Eeccccc
Q 019899 77 FAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRE-TLYELLDFAREK--NIHVI-SDEIYGG 141 (334)
Q Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~-~l~~i~~~~~~~--~~~vi-~D~~~~~ 141 (334)
...+++.|.+.+++. ++..+++-.|.|..|..-+.. .+++.++...+. ++.|+ +||-|+.
T Consensus 36 ~~~~~~~l~~li~~~-----~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~TT 99 (135)
T PF03652_consen 36 REKDIEELKKLIEEY-----QIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLTT 99 (135)
T ss_dssp CCCCHHHHHHHHHHC-----CECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCSH
T ss_pred CchHHHHHHHHHHHh-----CCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChhH
Confidence 367899999999985 899999999988878765543 456666655443 77776 8998764
No 400
>smart00642 Aamy Alpha-amylase domain.
Probab=82.52 E-value=7.7 Score=30.46 Aligned_cols=58 Identities=22% Similarity=0.329 Sum_probs=38.5
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCC-CCCcc-----------------cCCCHHHHHHHHHHHHhcCcEEEEeccc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNP-ANPVG-----------------NIIPRETLYELLDFAREKNIHVISDEIY 139 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p-~nptG-----------------~~~~~~~l~~i~~~~~~~~~~vi~D~~~ 139 (334)
|++.+.+.+...+.- ++.+|+++.+ .++.+ ..=+.++++++++.|+++|+.|+.|-+.
T Consensus 17 ~~~gi~~~l~yl~~l--G~~~I~l~Pi~~~~~~~~~~~gY~~~d~~~i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~ 92 (166)
T smart00642 17 DLQGIIEKLDYLKDL--GVTAIWLSPIFESPQGYPSYHGYDISDYKQIDPRFGTMEDFKELVDAAHARGIKVILDVVI 92 (166)
T ss_pred CHHHHHHHHHHHHHC--CCCEEEECcceeCCCCCCCCCCcCccccCCCCcccCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 566666665433222 5676777655 22321 1125688999999999999999999775
No 401
>PRK04296 thymidine kinase; Provisional
Probab=81.95 E-value=25 Score=28.22 Aligned_cols=98 Identities=19% Similarity=0.226 Sum_probs=57.3
Q ss_pred HHHHHHHHHHhcCCCCeEEecCCCCC---ChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEE
Q 019899 27 TPAVEILCFCLADHGNALLVPSPYYP---GFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILI 103 (334)
Q Consensus 27 ~~~~~~~~~~l~~~gd~vl~~~p~~~---~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~ 103 (334)
|.++..+.+. ...|.+|++..|... ....... ..|.++..+.. ...+++.+.+.+ ...++.+|++
T Consensus 17 T~~l~~~~~~-~~~g~~v~i~k~~~d~~~~~~~i~~-~lg~~~~~~~~-------~~~~~~~~~~~~---~~~~~dvviI 84 (190)
T PRK04296 17 TELLQRAYNY-EERGMKVLVFKPAIDDRYGEGKVVS-RIGLSREAIPV-------SSDTDIFELIEE---EGEKIDCVLI 84 (190)
T ss_pred HHHHHHHHHH-HHcCCeEEEEeccccccccCCcEec-CCCCcccceEe-------CChHHHHHHHHh---hCCCCCEEEE
Confidence 4555554444 346778887766322 2333344 55654433222 233445554443 1236777888
Q ss_pred eCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccc
Q 019899 104 CNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGG 141 (334)
Q Consensus 104 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~ 141 (334)
...+. ++.+++.++++.++..|+.||+=.-..+
T Consensus 85 DEaq~-----l~~~~v~~l~~~l~~~g~~vi~tgl~~~ 117 (190)
T PRK04296 85 DEAQF-----LDKEQVVQLAEVLDDLGIPVICYGLDTD 117 (190)
T ss_pred Ecccc-----CCHHHHHHHHHHHHHcCCeEEEEecCcc
Confidence 76643 6777788899998889999987655444
No 402
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=81.92 E-value=7.3 Score=33.61 Aligned_cols=71 Identities=14% Similarity=0.287 Sum_probs=43.3
Q ss_pred EecCCCCCChhhhhhhc--cCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHH
Q 019899 45 LVPSPYYPGFDRDIRFR--TGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYEL 122 (334)
Q Consensus 45 l~~~p~~~~~~~~~~~~--~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i 122 (334)
+..-|+|++..+... . -..-++.+|. ..-++.++++.+. +++.+++.+... +..+-++|
T Consensus 46 v~G~~~y~sv~dlp~-~~~~Dlavi~vpa------~~v~~~l~e~~~~------Gvk~avIis~Gf------~e~~~~~l 106 (286)
T TIGR01019 46 VLGLPVFDSVKEAVE-ETGANASVIFVPA------PFAADAIFEAIDA------GIELIVCITEGI------PVHDMLKV 106 (286)
T ss_pred ecCeeccCCHHHHhh-ccCCCEEEEecCH------HHHHHHHHHHHHC------CCCEEEEECCCC------CHHHHHHH
Confidence 334556777777665 3 2444555552 1234555555543 677666665443 33345789
Q ss_pred HHHHHhcCcEEE
Q 019899 123 LDFAREKNIHVI 134 (334)
Q Consensus 123 ~~~~~~~~~~vi 134 (334)
.++|+++|+.++
T Consensus 107 ~~~a~~~giril 118 (286)
T TIGR01019 107 KRYMEESGTRLI 118 (286)
T ss_pred HHHHHHcCCEEE
Confidence 999999999999
No 403
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=80.88 E-value=12 Score=30.90 Aligned_cols=93 Identities=14% Similarity=0.159 Sum_probs=53.1
Q ss_pred cCcHHHHHHHHHHhcCCCCeEEe-cCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEE
Q 019899 24 AGATPAVEILCFCLADHGNALLV-PSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGIL 102 (334)
Q Consensus 24 ~g~~~~~~~~~~~l~~~gd~vl~-~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~ 102 (334)
.+|..|-.++- +|.+++-.|.+ ..+.-......++ ..|.+++..+. -|.+.|.++++ +...++
T Consensus 6 atG~~G~~v~~-~L~~~~~~V~~l~R~~~~~~~~~l~-~~g~~vv~~d~-------~~~~~l~~al~-------g~d~v~ 69 (233)
T PF05368_consen 6 ATGNQGRSVVR-ALLSAGFSVRALVRDPSSDRAQQLQ-ALGAEVVEADY-------DDPESLVAALK-------GVDAVF 69 (233)
T ss_dssp TTSHHHHHHHH-HHHHTTGCEEEEESSSHHHHHHHHH-HTTTEEEES-T-------T-HHHHHHHHT-------TCSEEE
T ss_pred CccHHHHHHHH-HHHhCCCCcEEEEeccchhhhhhhh-cccceEeeccc-------CCHHHHHHHHc-------CCceEE
Confidence 34555544443 33335544433 3333222334455 57898886664 26789999988 456677
Q ss_pred EeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEE
Q 019899 103 ICNPANPVGNIIPRETLYELLDFAREKNIHVIS 135 (334)
Q Consensus 103 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~ 135 (334)
++.+... ....+.-..+++.|.+.|+..++
T Consensus 70 ~~~~~~~---~~~~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 70 SVTPPSH---PSELEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp EESSCSC---CCHHHHHHHHHHHHHHHT-SEEE
T ss_pred eecCcch---hhhhhhhhhHHHhhhccccceEE
Confidence 6666432 23344578889999988876664
No 404
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=80.79 E-value=7.2 Score=34.96 Aligned_cols=88 Identities=15% Similarity=0.194 Sum_probs=52.4
Q ss_pred EEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcc-ccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHH
Q 019899 44 LLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFA-FSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYEL 122 (334)
Q Consensus 44 vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~-~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i 122 (334)
-++..++++.....=-...+.++..++.. +.+. .+.+.|.+.+++ .-.+.++++++. +--|.+.+ .+.+
T Consensus 94 ~l~~~~~r~T~~K~Rv~s~nQQllRvD~E--e~~~~~~~~~ll~~~~~---~l~~~~~vVLSD--Y~KG~L~~---~q~~ 163 (467)
T COG2870 94 DLLRDKNRPTIVKLRVLSRNQQLLRLDFE--EKFPIEDENKLLEKIKN---ALKSFDALVLSD--YAKGVLTN---VQKM 163 (467)
T ss_pred ceEeecCCCceeeeeeecccceEEEeccc--ccCcchhHHHHHHHHHH---HhhcCCEEEEec--cccccchh---HHHH
Confidence 44555555544332111245677777763 2222 333444444443 223677777764 34577777 9999
Q ss_pred HHHHHhcCcEEEEeccccc
Q 019899 123 LDFAREKNIHVISDEIYGG 141 (334)
Q Consensus 123 ~~~~~~~~~~vi~D~~~~~ 141 (334)
+++|++.|++|++|--=.+
T Consensus 164 I~~ar~~~~pVLvDPKg~D 182 (467)
T COG2870 164 IDLAREAGIPVLVDPKGKD 182 (467)
T ss_pred HHHHHHcCCcEEECCCCcc
Confidence 9999999999999954333
No 405
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=77.49 E-value=40 Score=27.93 Aligned_cols=99 Identities=16% Similarity=0.176 Sum_probs=60.9
Q ss_pred EEEecCcHHHHHHHHHHhcCCCCeEEec--CCC------CC-----ChhhhhhhccCcEEEEEeCCCCCCccccHHHHHH
Q 019899 20 IVLTAGATPAVEILCFCLADHGNALLVP--SPY------YP-----GFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQ 86 (334)
Q Consensus 20 i~~~~g~~~~~~~~~~~l~~~gd~vl~~--~p~------~~-----~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~ 86 (334)
++..+||-....++..++-+ .+.+.+. .|. +. -...+++ ..|..++.+... ..+.-.++++.+
T Consensus 4 ~vl~SGGKDS~lAl~~~~~~-~~V~~L~~~~~~~~~s~~~h~~~~~~~~~qA~-algiPl~~~~~~--~~~e~~~~~l~~ 79 (222)
T TIGR00289 4 AVLYSGGKDSILALYKALEE-HEVISLVGVFSENEESYMFHSPNLHLTDLVAE-AVGIPLIKLYTS--GEEEKEVEDLAG 79 (222)
T ss_pred EEEecCcHHHHHHHHHHHHc-CeeEEEEEEcCCCCCccccccCCHHHHHHHHH-HcCCCeEEEEcC--CchhHHHHHHHH
Confidence 45778888888777776654 4433222 121 11 1112333 578887777652 222334455555
Q ss_pred HHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEE
Q 019899 87 AFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVI 134 (334)
Q Consensus 87 ~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi 134 (334)
.+++. ++.++ .+|.+.+..+...+-++|.+-|+..+
T Consensus 80 ~l~~~-----gv~~v-------v~GdI~s~~qr~~~e~vc~~~gl~~~ 115 (222)
T TIGR00289 80 QLGEL-----DVEAL-------CIGAIESNYQKSRIDKVCRELGLKSI 115 (222)
T ss_pred HHHHc-----CCCEE-------EECccccHHHHHHHHHHHHHcCCEEe
Confidence 55442 44444 37999999999999999999999876
No 406
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=77.25 E-value=19 Score=29.51 Aligned_cols=100 Identities=11% Similarity=0.085 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
.+.++++++. +.+++-+=.-+..+-.. .+..+++.++|++|++.+++++-+..-.--+...+++
T Consensus 24 ~~~ve~al~~------Gv~~vQlR~K~~~~~~~--~~~a~~~~~lc~~~~v~liINd~~dlA~~~~AdGVHl-------- 87 (211)
T COG0352 24 LEWVEAALKG------GVTAVQLREKDLSDEEY--LALAEKLRALCQKYGVPLIINDRVDLALAVGADGVHL-------- 87 (211)
T ss_pred HHHHHHHHhC------CCeEEEEecCCCChHHH--HHHHHHHHHHHHHhCCeEEecCcHHHHHhCCCCEEEc--------
Confidence 6888888875 66655554444332222 5567899999999999999998653211011112222
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL 200 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~ 200 (334)
...+.-+.-..|.++ +++.+|+=+. +.+-.....+.
T Consensus 88 --Gq~D~~~~~ar~~~~-~~~iIG~S~h-~~eea~~A~~~ 123 (211)
T COG0352 88 --GQDDMPLAEARELLG-PGLIIGLSTH-DLEEALEAEEL 123 (211)
T ss_pred --CCcccchHHHHHhcC-CCCEEEeecC-CHHHHHHHHhc
Confidence 122233334556676 8888888776 55544444443
No 407
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=76.13 E-value=33 Score=31.19 Aligned_cols=112 Identities=15% Similarity=0.129 Sum_probs=66.8
Q ss_pred hhhhhhc-CCCCCCCC-cEEEecCcH----HHHHHHHHHhcC--CCCeEEecCCCCCChhhhhhhccC--cEEEEEeCCC
Q 019899 4 FMSQVLG-QAVSFDPS-QIVLTAGAT----PAVEILCFCLAD--HGNALLVPSPYYPGFDRDIRFRTG--VELIPVHCRS 73 (334)
Q Consensus 4 ~~~~~~~-~~~~~~~~-~i~~~~g~~----~~~~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~~g--~~v~~v~~~~ 73 (334)
++.++++ +...+.++ ..+-..++| -+..-++..+.. |+-.+++++.+-.+.....+ ..| +.+.++|++
T Consensus 33 r~~eRfg~~~~~~~~~~p~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~-~~~~~v~h~YlP~D- 110 (419)
T COG1519 33 RLGERFGFYKPPVKPEGPLVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAA-LFGDSVIHQYLPLD- 110 (419)
T ss_pred HHHHHhcccCCCCCCCCCeEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHH-HcCCCeEEEecCcC-
Confidence 4555666 33334443 333333333 333444545543 57789998877777777666 666 566777763
Q ss_pred CCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEecc
Q 019899 74 TDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEI 138 (334)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~ 138 (334)
..-.+.+.++.. ++++++++...- +.-++.-|++.|++++.=++
T Consensus 111 ------~~~~v~rFl~~~-----~P~l~Ii~EtEl----------WPnli~e~~~~~~p~~LvNa 154 (419)
T COG1519 111 ------LPIAVRRFLRKW-----RPKLLIIMETEL----------WPNLINELKRRGIPLVLVNA 154 (419)
T ss_pred ------chHHHHHHHHhc-----CCCEEEEEeccc----------cHHHHHHHHHcCCCEEEEee
Confidence 234566666664 788877775532 55566678888888774443
No 408
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=75.98 E-value=27 Score=29.26 Aligned_cols=98 Identities=14% Similarity=0.235 Sum_probs=60.1
Q ss_pred CcEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhhccC---cEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 18 SQIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRFRTG---VELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 18 ~~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g---~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
..+++.+|+++++- .+.+.|.+.|-+|++..---........ ..+ ..+..+++ -|.++++++++....
T Consensus 6 ~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~-~~~~~~~~~~~~DV-------tD~~~~~~~i~~~~~ 77 (246)
T COG4221 6 GKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALAD-EIGAGAALALALDV-------TDRAAVEAAIEALPE 77 (246)
T ss_pred CcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHH-hhccCceEEEeecc-------CCHHHHHHHHHHHHH
Confidence 36888889988984 4456677889888877655444444444 455 23344443 356777777776655
Q ss_pred cCCceeEEEEeCCCCCcccC---CCHHHHHHHHH
Q 019899 94 RGVKVRGILICNPANPVGNI---IPRETLYELLD 124 (334)
Q Consensus 94 ~~~~~~~i~~~~p~nptG~~---~~~~~l~~i~~ 124 (334)
+-+++. ++++|..-.-|.. .+.++++.+.+
T Consensus 78 ~~g~iD-iLvNNAGl~~g~~~~~~~~~dw~~Mid 110 (246)
T COG4221 78 EFGRID-ILVNNAGLALGDPLDEADLDDWDRMID 110 (246)
T ss_pred hhCccc-EEEecCCCCcCChhhhCCHHHHHHHHH
Confidence 556788 5566553322332 35556666666
No 409
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=75.64 E-value=55 Score=28.61 Aligned_cols=60 Identities=22% Similarity=0.255 Sum_probs=41.5
Q ss_pred CccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEecc
Q 019899 76 NFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEI 138 (334)
Q Consensus 76 ~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~ 138 (334)
+..++.+++++.++.....-.+-.. ++.+.+=|.| ++.+...++++.|++.|..|++|..
T Consensus 108 Gp~is~~~~~~~l~~~~~~l~~~d~-VvlsGSlP~g--~~~d~y~~li~~~~~~g~~vilD~S 167 (310)
T COG1105 108 GPEISEAELEQFLEQLKALLESDDI-VVLSGSLPPG--VPPDAYAELIRILRQQGAKVILDTS 167 (310)
T ss_pred CCCCCHHHHHHHHHHHHHhcccCCE-EEEeCCCCCC--CCHHHHHHHHHHHHhcCCeEEEECC
Confidence 3456777777777665443334443 4444555655 4577899999999999999999964
No 410
>PRK08265 short chain dehydrogenase; Provisional
Probab=75.06 E-value=49 Score=27.81 Aligned_cols=99 Identities=11% Similarity=0.027 Sum_probs=49.8
Q ss_pred cEEEecCcHHHH-HHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 19 QIVLTAGATPAV-EILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 19 ~i~~~~g~~~~~-~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
..++.+|++.++ ..+...|.+.|.+|++..-.-........ ..+.++..+.++ --|.+++++.++......++
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D-----l~~~~~~~~~~~~~~~~~g~ 80 (261)
T PRK08265 7 KVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAA-SLGERARFIATD-----ITDDAAIERAVATVVARFGR 80 (261)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HhCCeeEEEEec-----CCCHHHHHHHHHHHHHHhCC
Confidence 355555555555 44455566788787776543222333333 335455555542 13566777777665444446
Q ss_pred eeEEEEeCCC-CCcccCCCHHHHHHHH
Q 019899 98 VRGILICNPA-NPVGNIIPRETLYELL 123 (334)
Q Consensus 98 ~~~i~~~~p~-nptG~~~~~~~l~~i~ 123 (334)
+..++.+... .+.+...+.+++++..
T Consensus 81 id~lv~~ag~~~~~~~~~~~~~~~~~~ 107 (261)
T PRK08265 81 VDILVNLACTYLDDGLASSRADWLAAL 107 (261)
T ss_pred CCEEEECCCCCCCCcCcCCHHHHHHHH
Confidence 7755544332 2222334444444443
No 411
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=74.91 E-value=47 Score=27.51 Aligned_cols=99 Identities=15% Similarity=0.209 Sum_probs=63.2
Q ss_pred EEEecCcHHHHHHHHHHhcCCCCeEEe----cCC--CCCC------hh-hhhhhccCcEEEEEeCCCCCCccccHHHHHH
Q 019899 20 IVLTAGATPAVEILCFCLADHGNALLV----PSP--YYPG------FD-RDIRFRTGVELIPVHCRSTDNFAFSITALDQ 86 (334)
Q Consensus 20 i~~~~g~~~~~~~~~~~l~~~gd~vl~----~~p--~~~~------~~-~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~ 86 (334)
++..+||-....++..++.+ -+.+.+ +.. .|.. .. .+++ ..|..++.++.. ....--.+++.+
T Consensus 4 ~~l~SGGKDS~~al~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~-algipl~~~~~~--~~~e~~~e~l~~ 79 (223)
T TIGR00290 4 AALISGGKDSCLALYHALKE-HEVISLVNIMPENEESYMFHGVNAHLTDLQAE-SIGIPLIKLYTE--GTEEDEVEELKG 79 (223)
T ss_pred EEEecCcHHHHHHHHHHHHh-CeeEEEEEEecCCCCcccccccCHHHHHHHHH-HcCCCeEEeecC--CCccHHHHHHHH
Confidence 56779999998888888766 443322 111 1211 11 1233 578887776652 222334566777
Q ss_pred HHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEE
Q 019899 87 AFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVI 134 (334)
Q Consensus 87 ~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi 134 (334)
++++. ++.++ .+|.+.+..+...+-++|.+-|+..+
T Consensus 80 ~l~~~-----gv~~v-------v~GdI~s~~qr~~~e~v~~~lgl~~~ 115 (223)
T TIGR00290 80 ILHTL-----DVEAV-------VFGAIYSEYQKTRIERVCRELGLKSF 115 (223)
T ss_pred HHHHc-----CCCEE-------EECCcccHHHHHHHHHHHHhcCCEEe
Confidence 77663 44433 37899999999999999999998876
No 412
>TIGR00623 sula cell division inhibitor SulA. All proteins in this family for which the functions are known are cell division inhibitors. In E. coli, SulA is one of the SOS regulated genes.
Probab=73.04 E-value=37 Score=26.60 Aligned_cols=104 Identities=15% Similarity=0.101 Sum_probs=59.3
Q ss_pred cEEEecCcHHHHH-HHHHH---hcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 19 QIVLTAGATPAVE-ILCFC---LADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~---l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
+|++......-.. +++.. +...+.-++.-.|-+..+...+. ..|.+...+-.-....-.-.+...|++++.
T Consensus 34 El~~~~~~pg~~elLLlP~L~~Ls~~~Rwlv~IaPP~~~~~~~L~-~~Gl~l~rvlli~~~~~~d~lwa~EQaLrS---- 108 (168)
T TIGR00623 34 EVVYREDQPMMAQLLLLPLLQQLGQQSRWQLWLTPQQKLSKEWVQ-SSGLPLTKVMQISQLSPCNTVESMIRALRT---- 108 (168)
T ss_pred EEeecCCCchhHHHHHHHHHHHhcccCceEEEECCCCccCHHHHH-HcCCChhHEEEEecCCchhHHHHHHHHHHh----
Confidence 5666554222212 34333 34445556666666667777777 788776554321111222357788899987
Q ss_pred CCceeEEEEeC-CCCCcccCCCHHHHHHHHHHHHhcCcEEE
Q 019899 95 GVKVRGILICN-PANPVGNIIPRETLYELLDFAREKNIHVI 134 (334)
Q Consensus 95 ~~~~~~i~~~~-p~nptG~~~~~~~l~~i~~~~~~~~~~vi 134 (334)
+... .+++- |+. .+.+++++|--.+..-+.+.+
T Consensus 109 -G~c~-aVL~WLp~~-----l~~~~lRRLqlAA~~G~al~f 142 (168)
T TIGR00623 109 -GNYS-VVIGWLTDE-----LTEEEHAKLVRAAEEGNAMGF 142 (168)
T ss_pred -CCCc-EEEecCCcc-----CCHHHHHHHHHHHHhCCCeEE
Confidence 2445 55554 533 667788888877766655544
No 413
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain. Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.
Probab=73.04 E-value=16 Score=33.89 Aligned_cols=46 Identities=22% Similarity=0.295 Sum_probs=29.3
Q ss_pred ceeEEEEeCCCC-CcccCCCHHHHHHHHHHHHhcCcEEEEeccccccc
Q 019899 97 KVRGILICNPAN-PVGNIIPRETLYELLDFAREKNIHVISDEIYGGSI 143 (334)
Q Consensus 97 ~~~~i~~~~p~n-ptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~ 143 (334)
+++.+++.+... .+|.- ..+.-+++.++|+++|+.|+--++.+...
T Consensus 88 gv~~~vi~s~gf~e~g~~-g~~~~~~l~~~a~~~girvlGPnc~G~~~ 134 (447)
T TIGR02717 88 GVKGAVVITAGFKEVGEE-GAELEQELVEIARKYGMRLLGPNCLGIIN 134 (447)
T ss_pred CCCEEEEECCCccccCcc-hHHHHHHHHHHHHHcCCEEEecCeeeEec
Confidence 567666654432 33321 11223789999999999999888766544
No 414
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=72.86 E-value=62 Score=28.00 Aligned_cols=137 Identities=17% Similarity=0.196 Sum_probs=67.5
Q ss_pred cEEEecCcHHHH-HHHHHHhcCCCCeEEecCCCCCChhhhhhhc--cCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcC
Q 019899 19 QIVLTAGATPAV-EILCFCLADHGNALLVPSPYYPGFDRDIRFR--TGVELIPVHCRSTDNFAFSITALDQAFNQARKRG 95 (334)
Q Consensus 19 ~i~~~~g~~~~~-~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~--~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~ 95 (334)
++++-+|+..++ -.+..-+.+.|-++++-+-.-.+..+..+.. .| ++..+.++= -+.+++.+..+..++.-
T Consensus 39 ~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdi-----s~~eei~~~a~~Vk~e~ 112 (300)
T KOG1201|consen 39 EIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDI-----SDREEIYRLAKKVKKEV 112 (300)
T ss_pred CEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecC-----CCHHHHHHHHHHHHHhc
Confidence 444444444455 4444456677776655554444444433312 24 454444421 23455555555444444
Q ss_pred CceeEEEEeCCCC---CcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhc-cccCCCcEEEEec
Q 019899 96 VKVRGILICNPAN---PVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEA-EEVDKDRVHIIYG 171 (334)
Q Consensus 96 ~~~~~i~~~~p~n---ptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s 171 (334)
+.+. |+++|..= -...-.+.+++++..++=- .+. +...+.+.+. .+...+-++.+.|
T Consensus 113 G~V~-ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~-----------~~~-------f~t~kaFLP~M~~~~~GHIV~IaS 173 (300)
T KOG1201|consen 113 GDVD-ILVNNAGIVTGKKLLDCSDEEIQKTFDVNT-----------IAH-------FWTTKAFLPKMLENNNGHIVTIAS 173 (300)
T ss_pred CCce-EEEeccccccCCCccCCCHHHHHHHHHHhh-----------HHH-------HHHHHHHhHHHHhcCCceEEEehh
Confidence 4666 66766632 2233457777777766321 111 1122222221 1222677777777
Q ss_pred ccccCCCCC
Q 019899 172 LSKDLSLPG 180 (334)
Q Consensus 172 ~sK~~~~~g 180 (334)
....+|.+|
T Consensus 174 ~aG~~g~~g 182 (300)
T KOG1201|consen 174 VAGLFGPAG 182 (300)
T ss_pred hhcccCCcc
Confidence 776676555
No 415
>PRK00109 Holliday junction resolvase-like protein; Reviewed
Probab=72.29 E-value=16 Score=27.62 Aligned_cols=58 Identities=17% Similarity=0.189 Sum_probs=41.4
Q ss_pred ccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHH-HHHHHHHHHHh-cCcEEE-Eeccccc
Q 019899 79 FSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRE-TLYELLDFARE-KNIHVI-SDEIYGG 141 (334)
Q Consensus 79 ~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~-~l~~i~~~~~~-~~~~vi-~D~~~~~ 141 (334)
.+.+.|.+.++++ ++..+++-.|-|+.|..-+.. .+++.++..++ .++.|+ +||.|+.
T Consensus 41 ~~~~~l~~~i~~~-----~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~~v~~~DEr~TT 101 (138)
T PRK00109 41 PDWDRLEKLIKEW-----QPDGLVVGLPLNMDGTEGPRTERARKFANRLEGRFGLPVVLVDERLST 101 (138)
T ss_pred hHHHHHHHHHHHh-----CCCEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcCH
Confidence 4688899999886 788899999988888875533 35555555543 355554 8998753
No 416
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=72.23 E-value=7.7 Score=33.84 Aligned_cols=63 Identities=14% Similarity=0.288 Sum_probs=43.2
Q ss_pred ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEE
Q 019899 61 RTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVI 134 (334)
Q Consensus 61 ~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi 134 (334)
..+.++..+.+.++.+|.+..+.+.+.-+.. . . .+ ..+.+-.++.+|+++|++.|+++||-||
T Consensus 27 ~~K~N~lhlHl~D~~~~~le~~~~p~l~~~g-----~-~----~~-~~~~~~~yT~~di~elv~yA~~rgI~vi 89 (303)
T cd02742 27 RYKINTFHWHLTDDQAWRIESKKFPELAEKG-----G-Q----IN-PRSPGGFYTYAQLKDIIEYAAARGIEVI 89 (303)
T ss_pred HhCCcEEEEeeecCCCceEeeCccchhhhhc-----c-c----cc-CCCCCCeECHHHHHHHHHHHHHcCCEEE
Confidence 4677887888766666666655555443321 1 0 11 1244568999999999999999999999
No 417
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=71.81 E-value=11 Score=33.02 Aligned_cols=76 Identities=11% Similarity=0.202 Sum_probs=53.4
Q ss_pred CCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHH
Q 019899 48 SPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAR 127 (334)
Q Consensus 48 ~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~ 127 (334)
.-.|++|...++ .-..++++++....- ..+.+-.++.. -|.|++.-|- ..+.++.++|.+.|+
T Consensus 58 ~k~y~syEeLak-d~~vDvVyi~~~~~q----H~evv~l~l~~-------~K~VL~EKPl-----a~n~~e~~~iveaA~ 120 (351)
T KOG2741|consen 58 PKAYGSYEELAK-DPEVDVVYISTPNPQ----HYEVVMLALNK-------GKHVLCEKPL-----AMNVAEAEEIVEAAE 120 (351)
T ss_pred CccccCHHHHhc-CCCcCEEEeCCCCcc----HHHHHHHHHHc-------CCcEEecccc-----cCCHHHHHHHHHHHH
Confidence 447888888888 778899999874322 23445555553 3447777653 256889999999999
Q ss_pred hcCcEEEEeccccc
Q 019899 128 EKNIHVISDEIYGG 141 (334)
Q Consensus 128 ~~~~~vi~D~~~~~ 141 (334)
++| .++.|..|.-
T Consensus 121 ~rg-v~~meg~~~R 133 (351)
T KOG2741|consen 121 ARG-VFFMEGLWWR 133 (351)
T ss_pred HcC-cEEEeeeeee
Confidence 999 5566877754
No 418
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=70.37 E-value=26 Score=26.23 Aligned_cols=58 Identities=14% Similarity=0.101 Sum_probs=41.0
Q ss_pred ccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHH-HHHHHHHHH-HhcCcEEE-Eeccccc
Q 019899 79 FSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRE-TLYELLDFA-REKNIHVI-SDEIYGG 141 (334)
Q Consensus 79 ~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~-~l~~i~~~~-~~~~~~vi-~D~~~~~ 141 (334)
.+.+.|.+.++++ ++..+++-.|-|+.|..-+.. ..++.++.. .+.++.|. +||-++.
T Consensus 35 ~~~~~l~~~i~~~-----~~~~iVvGlP~~~dG~~~~~a~~v~~f~~~L~~~~~~~v~~~DEr~TT 95 (130)
T TIGR00250 35 PDWSRIEELLKEW-----TPDKIVVGLPLNMDGTEGPLTERAQKFANRLEGRFGVPVVLWDERLST 95 (130)
T ss_pred HHHHHHHHHHHHc-----CCCEEEEeccCCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcCH
Confidence 4678899988886 788899999999888876533 344555444 33466554 8988653
No 419
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=70.29 E-value=38 Score=24.47 Aligned_cols=63 Identities=14% Similarity=0.098 Sum_probs=43.2
Q ss_pred ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc--CcEEEEecc
Q 019899 61 RTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK--NIHVISDEI 138 (334)
Q Consensus 61 ~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~--~~~vi~D~~ 138 (334)
..|.++..++. ..+.+++.+.+.+. ++++|.++.+.. .+.+...++++..++. ++.+++=..
T Consensus 26 ~~G~~v~~~d~------~~~~~~l~~~~~~~-----~pd~V~iS~~~~-----~~~~~~~~l~~~~k~~~p~~~iv~GG~ 89 (121)
T PF02310_consen 26 KAGHEVDILDA------NVPPEELVEALRAE-----RPDVVGISVSMT-----PNLPEAKRLARAIKERNPNIPIVVGGP 89 (121)
T ss_dssp HTTBEEEEEES------SB-HHHHHHHHHHT-----TCSEEEEEESSS-----THHHHHHHHHHHHHTTCTTSEEEEEES
T ss_pred HCCCeEEEECC------CCCHHHHHHHHhcC-----CCcEEEEEccCc-----CcHHHHHHHHHHHHhcCCCCEEEEECC
Confidence 56999998875 23558888888774 888888765433 2344577777777665 788886554
Q ss_pred c
Q 019899 139 Y 139 (334)
Q Consensus 139 ~ 139 (334)
+
T Consensus 90 ~ 90 (121)
T PF02310_consen 90 H 90 (121)
T ss_dssp S
T ss_pred c
Confidence 3
No 420
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=70.14 E-value=56 Score=26.35 Aligned_cols=102 Identities=13% Similarity=0.249 Sum_probs=60.9
Q ss_pred EEEecCcHHHHHHHHHHhcCCCCeEE---ecCCC-CCC----------hhhhhhhccCcEEEEEeCCCCCCccccHHHHH
Q 019899 20 IVLTAGATPAVEILCFCLADHGNALL---VPSPY-YPG----------FDRDIRFRTGVELIPVHCRSTDNFAFSITALD 85 (334)
Q Consensus 20 i~~~~g~~~~~~~~~~~l~~~gd~vl---~~~p~-~~~----------~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~ 85 (334)
++..|||-....++..+.- .|..|+ +..|. +.. ....++ ..|.+.+.++++.++. --.+++.
T Consensus 3 ~v~~SGGkDS~~al~~a~~-~G~~v~~l~~~~~~~~~~~~~h~~~~e~~~~~A~-~lgipl~~i~~~~~~e--~~~~~l~ 78 (194)
T cd01994 3 VALISGGKDSCYALYRALE-EGHEVVALLNLTPEEGSSMMYHTVNHELLELQAE-AMGIPLIRIEISGEEE--DEVEDLK 78 (194)
T ss_pred EEEecCCHHHHHHHHHHHH-cCCEEEEEEEEecCCCCcccccccCHHHHHHHHH-HcCCcEEEEeCCCCch--HHHHHHH
Confidence 4677888887777776654 454322 22222 111 112333 5788887777632111 1225666
Q ss_pred HHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEE
Q 019899 86 QAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVI 134 (334)
Q Consensus 86 ~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi 134 (334)
+.+++.+.. .+.++ -+|.+.+......+-++|.+.|+..+
T Consensus 79 ~~l~~~~~~--g~~~v-------v~G~i~sd~~~~~~e~~~~~~gl~~~ 118 (194)
T cd01994 79 ELLRKLKEE--GVDAV-------VFGAILSEYQRTRVERVCERLGLEPL 118 (194)
T ss_pred HHHHHHHHc--CCCEE-------EECccccHHHHHHHHHHHHHcCCEEE
Confidence 666665333 24433 36888898899999999999999876
No 421
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=69.53 E-value=22 Score=27.07 Aligned_cols=56 Identities=21% Similarity=0.224 Sum_probs=42.7
Q ss_pred ccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHH-HHHHHHHHHHh-cCcEEE-Eeccc
Q 019899 79 FSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRE-TLYELLDFARE-KNIHVI-SDEIY 139 (334)
Q Consensus 79 ~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~-~l~~i~~~~~~-~~~~vi-~D~~~ 139 (334)
.+.+.+.+.++++ .+..|++-.|.|+.|...+.. ..+++.+..++ .+++|+ .||-.
T Consensus 40 ~~~~~l~~li~~~-----~~~~vVVGlP~~m~g~~~~~~~~~~~f~~~L~~r~~lpv~l~DERl 98 (141)
T COG0816 40 QDFNALLKLVKEY-----QVDTVVVGLPLNMDGTEGPRAELARKFAERLKKRFNLPVVLWDERL 98 (141)
T ss_pred hhHHHHHHHHHHh-----CCCEEEEecCcCCCCCcchhHHHHHHHHHHHHHhcCCCEEEEcCcc
Confidence 5899999999987 888999999999999988844 35666665543 456655 77753
No 422
>PTZ00187 succinyl-CoA synthetase alpha subunit; Provisional
Probab=69.34 E-value=27 Score=30.61 Aligned_cols=69 Identities=10% Similarity=0.182 Sum_probs=45.7
Q ss_pred cCCCCCChhhhhhhc--cCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHH
Q 019899 47 PSPYYPGFDRDIRFR--TGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLD 124 (334)
Q Consensus 47 ~~p~~~~~~~~~~~~--~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~ 124 (334)
.-|+|++..+..+ . ...-++.+|. ..-.+.++++++. .++++++..-..| ..+..++.+
T Consensus 73 Gvpvy~sv~ea~~-~~~~D~avI~VPa------~~v~dai~Ea~~a------GI~~~ViiteGfp------e~d~~~l~~ 133 (317)
T PTZ00187 73 GLPVFATVKEAKK-ATGADASVIYVPP------PHAASAIIEAIEA------EIPLVVCITEGIP------QHDMVKVKH 133 (317)
T ss_pred CccccCCHHHHhc-ccCCCEEEEecCH------HHHHHHHHHHHHc------CCCEEEEECCCCc------hhhHHHHHH
Confidence 7899999999887 6 4555666663 2346677777765 7887777655543 233444445
Q ss_pred HH-HhcCcEEE
Q 019899 125 FA-REKNIHVI 134 (334)
Q Consensus 125 ~~-~~~~~~vi 134 (334)
++ +++|+.||
T Consensus 134 ~~~~~~g~rli 144 (317)
T PTZ00187 134 ALLSQNKTRLI 144 (317)
T ss_pred HHhhcCCCEEE
Confidence 54 45899998
No 423
>PRK10595 SOS cell division inhibitor; Provisional
Probab=69.09 E-value=53 Score=25.68 Aligned_cols=86 Identities=19% Similarity=0.178 Sum_probs=52.9
Q ss_pred hcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeC-CCCCcccCCC
Q 019899 37 LADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICN-PANPVGNIIP 115 (334)
Q Consensus 37 l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~-p~nptG~~~~ 115 (334)
+...+.-|+.-.|-+..+...+. ..|.....+-.-......-.+..+|++++. +... .++.- |.. .+
T Consensus 52 l~~~~rwilwI~PP~~p~~~~L~-~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrs-----G~~~-aVL~Wlp~~-----l~ 119 (164)
T PRK10595 52 LGQQSRWQLWLTPQQKLSREWLQ-ASGLPLTKVMQLSQLSPCHTVEAMERALRT-----GNYS-VVLGWLPDE-----LT 119 (164)
T ss_pred HhccCceEEEECCCCCCCHHHHH-HcCCCcccEEEEecCCcHHHHHHHHHHHhh-----CCCc-EEEECCccc-----CC
Confidence 34455567777788888888888 788665444321122223356777888887 2445 44454 422 56
Q ss_pred HHHHHHHHHHHHhcCcEEE
Q 019899 116 RETLYELLDFAREKNIHVI 134 (334)
Q Consensus 116 ~~~l~~i~~~~~~~~~~vi 134 (334)
.++++++.-.|.+.+.+.+
T Consensus 120 ~~~~RRLQlAAe~g~~l~f 138 (164)
T PRK10595 120 EEEHARLVDAAQEGNAMGF 138 (164)
T ss_pred HHHHHHHHHHHHhCCCEEE
Confidence 7788888877776655444
No 424
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=68.80 E-value=39 Score=26.49 Aligned_cols=83 Identities=13% Similarity=0.182 Sum_probs=47.6
Q ss_pred cHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeC
Q 019899 26 ATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICN 105 (334)
Q Consensus 26 ~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~ 105 (334)
+.-|-. ++..|.+.|-+|....-.-..... ..+.+++..++ .|.+.+.++++ +..+++.+.
T Consensus 8 G~vG~~-l~~~L~~~~~~V~~~~R~~~~~~~----~~~~~~~~~d~-------~d~~~~~~al~-------~~d~vi~~~ 68 (183)
T PF13460_consen 8 GFVGRA-LAKQLLRRGHEVTALVRSPSKAED----SPGVEIIQGDL-------FDPDSVKAALK-------GADAVIHAA 68 (183)
T ss_dssp SHHHHH-HHHHHHHTTSEEEEEESSGGGHHH----CTTEEEEESCT-------TCHHHHHHHHT-------TSSEEEECC
T ss_pred ChHHHH-HHHHHHHCCCEEEEEecCchhccc----ccccccceeee-------hhhhhhhhhhh-------hcchhhhhh
Confidence 444444 444555566666655433222222 35666666554 46788888887 456666665
Q ss_pred CCCCcccCCCHHHHHHHHHHHHhcCc
Q 019899 106 PANPVGNIIPRETLYELLDFAREKNI 131 (334)
Q Consensus 106 p~nptG~~~~~~~l~~i~~~~~~~~~ 131 (334)
+.++. +.+..+.+++.|++.++
T Consensus 69 ~~~~~----~~~~~~~~~~a~~~~~~ 90 (183)
T PF13460_consen 69 GPPPK----DVDAAKNIIEAAKKAGV 90 (183)
T ss_dssp HSTTT----HHHHHHHHHHHHHHTTS
T ss_pred hhhcc----ccccccccccccccccc
Confidence 54433 25567788888876553
No 425
>COG1435 Tdk Thymidine kinase [Nucleotide transport and metabolism]
Probab=68.44 E-value=62 Score=26.17 Aligned_cols=114 Identities=21% Similarity=0.140 Sum_probs=70.6
Q ss_pred ecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhh---hhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCcee
Q 019899 23 TAGATPAVEILCFCLADHGNALLVPSPYYPGFDR---DIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVR 99 (334)
Q Consensus 23 ~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~---~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 99 (334)
.+|=|+-+...+......|.+|++..|....... ... +.|.+...+.++ +..++-+.|..... ...+.
T Consensus 14 ~SGKT~eLl~r~~~~~~~g~~v~vfkp~iD~R~~~~~V~S-r~G~~~~A~~i~-------~~~~i~~~i~~~~~-~~~~~ 84 (201)
T COG1435 14 FSGKTEELLRRARRYKEAGMKVLVFKPAIDTRYGVGKVSS-RIGLSSEAVVIP-------SDTDIFDEIAALHE-KPPVD 84 (201)
T ss_pred cCcchHHHHHHHHHHHHcCCeEEEEecccccccccceeee-ccCCcccceecC-------ChHHHHHHHHhccc-CCCcC
Confidence 3455666666666666688889999887765433 233 456666555542 23445555543200 01256
Q ss_pred EEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchh
Q 019899 100 GILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSM 152 (334)
Q Consensus 100 ~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~ 152 (334)
.|++...+. ++.+.+..+.+++.+.|++|+.=.--.+ |.+..+...
T Consensus 85 ~v~IDEaQF-----~~~~~v~~l~~lad~lgi~Vi~~GL~~D--FrgepFe~s 130 (201)
T COG1435 85 CVLIDEAQF-----FDEELVYVLNELADRLGIPVICYGLDTD--FRGEPFEGS 130 (201)
T ss_pred EEEEehhHh-----CCHHHHHHHHHHHhhcCCEEEEeccccc--cccCCCccH
Confidence 788887776 7788899999999999999996443333 334444433
No 426
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=68.35 E-value=62 Score=28.11 Aligned_cols=102 Identities=19% Similarity=0.236 Sum_probs=66.6
Q ss_pred CCCcEEEecCcHHHHHHHHHHhcCCCC--eEEecC--CCCCChhh--hhhhccCcEEEEEeCCCCCCccccHHHHHHHHH
Q 019899 16 DPSQIVLTAGATPAVEILCFCLADHGN--ALLVPS--PYYPGFDR--DIRFRTGVELIPVHCRSTDNFAFSITALDQAFN 89 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l~~~gd--~vl~~~--p~~~~~~~--~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~ 89 (334)
...++++|.+-+.++..++....+.|. +|++.+ |.+.+..- .++ ..|.++..++- ..+-..++
T Consensus 118 ~dg~~IlTh~~S~~v~~~l~~A~~~~k~~~V~VtESRP~~eG~~~ak~L~-~~gI~~~~I~D----------sa~~~~~~ 186 (301)
T COG1184 118 HDGDVILTHSFSKTVLEVLKTAADRGKRFKVIVTESRPRGEGRIMAKELR-QSGIPVTVIVD----------SAVGAFMS 186 (301)
T ss_pred cCCCEEEEecCcHHHHHHHHHhhhcCCceEEEEEcCCCcchHHHHHHHHH-HcCCceEEEec----------hHHHHHHH
Confidence 467899999998898888888777765 566653 66554332 334 47777776661 23334444
Q ss_pred HHHHcCCceeEEEEeC-CCCCcccCCCHHHHHHHHHHHHhcCcEEEE
Q 019899 90 QARKRGVKVRGILICN-PANPVGNIIPRETLYELLDFAREKNIHVIS 135 (334)
Q Consensus 90 ~~~~~~~~~~~i~~~~-p~nptG~~~~~~~l~~i~~~~~~~~~~vi~ 135 (334)
+ ...+++-. .-...|.+++.----.|+-.|++.+.++++
T Consensus 187 ~-------vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v 226 (301)
T COG1184 187 R-------VDKVLVGADAILANGALVNKIGTSPLALAARELRVPFYV 226 (301)
T ss_pred h-------CCEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEE
Confidence 3 34344433 234567777766677888889999998884
No 427
>PLN00125 Succinyl-CoA ligase [GDP-forming] subunit alpha
Probab=68.11 E-value=18 Score=31.45 Aligned_cols=72 Identities=11% Similarity=0.117 Sum_probs=45.5
Q ss_pred EEecCCCCCChhhhhhhc--cCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCC-CcccCCCHHHHH
Q 019899 44 LLVPSPYYPGFDRDIRFR--TGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPAN-PVGNIIPRETLY 120 (334)
Q Consensus 44 vl~~~p~~~~~~~~~~~~--~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~n-ptG~~~~~~~l~ 120 (334)
-+.--|+|++..+... . ...-++.+|. ..-++.++++.+. +++++++.+... .+| ..+
T Consensus 51 ~i~G~~~y~sv~dlp~-~~~~DlAvI~vPa------~~v~~al~e~~~~------Gvk~~vIisaGf~e~g------~~~ 111 (300)
T PLN00125 51 EHLGLPVFNTVAEAKA-ETKANASVIYVPP------PFAAAAILEAMEA------ELDLVVCITEGIPQHD------MVR 111 (300)
T ss_pred eEcCeeccCCHHHHhh-ccCCCEEEEecCH------HHHHHHHHHHHHc------CCCEEEEECCCCCccc------HHH
Confidence 3457788888888776 4 3555666663 1234555565554 677766665543 333 245
Q ss_pred HHHHHHHhcCcEEE
Q 019899 121 ELLDFAREKNIHVI 134 (334)
Q Consensus 121 ~i~~~~~~~~~~vi 134 (334)
.+.++++++|+.|+
T Consensus 112 ~~~~~ar~~girvi 125 (300)
T PLN00125 112 VKAALNRQSKTRLI 125 (300)
T ss_pred HHHHHHhhcCCEEE
Confidence 55567899999999
No 428
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=67.55 E-value=8.3 Score=34.10 Aligned_cols=64 Identities=14% Similarity=0.289 Sum_probs=42.4
Q ss_pred ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEE
Q 019899 61 RTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVI 134 (334)
Q Consensus 61 ~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi 134 (334)
..+.++..+.+.++.+|.+.++...+.-+. | ..+ ....+.|-.++.+|+++|++.|+++||-||
T Consensus 29 ~~KlN~lhlHLtD~~~~rle~~~~P~lt~~----g-a~~-----~~~~~~~~~YT~~di~elv~yA~~rgI~vI 92 (329)
T cd06568 29 LYKLNVLHLHLTDDQGWRIEIKSWPKLTEI----G-GST-----EVGGGPGGYYTQEDYKDIVAYAAERHITVV 92 (329)
T ss_pred HhCCcEEEEEeecCCcceeeecCccccccc----c-ccc-----ccCCCCCCcCCHHHHHHHHHHHHHcCCEEE
Confidence 467777777776556666655444332111 0 101 112355678999999999999999999999
No 429
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=65.44 E-value=21 Score=33.51 Aligned_cols=26 Identities=27% Similarity=0.438 Sum_probs=23.6
Q ss_pred CHHHHHHHHHHHHhcCcEEEEecccc
Q 019899 115 PRETLYELLDFAREKNIHVISDEIYG 140 (334)
Q Consensus 115 ~~~~l~~i~~~~~~~~~~vi~D~~~~ 140 (334)
+.++++++++.|+++|+.||+|-+.-
T Consensus 79 t~~dl~~Li~~~H~~Gi~vi~D~V~N 104 (479)
T PRK09441 79 TKEELLNAIDALHENGIKVYADVVLN 104 (479)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 56789999999999999999999864
No 430
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=65.08 E-value=40 Score=24.56 Aligned_cols=89 Identities=17% Similarity=0.124 Sum_probs=42.5
Q ss_pred HHHHHHhcCCCCeEEecCCCCCChhh-----hhhhc-cCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEe
Q 019899 31 EILCFCLADHGNALLVPSPYYPGFDR-----DIRFR-TGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILIC 104 (334)
Q Consensus 31 ~~~~~~l~~~gd~vl~~~p~~~~~~~-----~~~~~-~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~ 104 (334)
..++..+.+.|-.|+--+|.+..... .+.+. ...++..+-+ ..+.+.+.+++.... +++.+++.
T Consensus 17 ~~v~~~l~~~G~~v~~Vnp~~~~i~G~~~y~sl~e~p~~iDlavv~~--------~~~~~~~~v~~~~~~--g~~~v~~~ 86 (116)
T PF13380_consen 17 YRVLRNLKAAGYEVYPVNPKGGEILGIKCYPSLAEIPEPIDLAVVCV--------PPDKVPEIVDEAAAL--GVKAVWLQ 86 (116)
T ss_dssp HHHHHHHHHTT-EEEEESTTCSEETTEE-BSSGGGCSST-SEEEE-S---------HHHHHHHHHHHHHH--T-SEEEE-
T ss_pred HHHHHHHHhCCCEEEEECCCceEECcEEeeccccCCCCCCCEEEEEc--------CHHHHHHHHHHHHHc--CCCEEEEE
Confidence 34555665577566666666543222 11100 1233333322 334444444443332 57767766
Q ss_pred CCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccc
Q 019899 105 NPANPVGNIIPRETLYELLDFAREKNIHVISDEIY 139 (334)
Q Consensus 105 ~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~ 139 (334)
.. .+-+++.+.|+++|+.++-..+.
T Consensus 87 ~g----------~~~~~~~~~a~~~gi~vigp~C~ 111 (116)
T PF13380_consen 87 PG----------AESEELIEAAREAGIRVIGPNCL 111 (116)
T ss_dssp TT----------S--HHHHHHHHHTT-EEEESS-H
T ss_pred cc----------hHHHHHHHHHHHcCCEEEeCCcc
Confidence 44 34688889999999999966553
No 431
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=64.95 E-value=67 Score=25.28 Aligned_cols=99 Identities=16% Similarity=0.192 Sum_probs=53.3
Q ss_pred HHHHHHHHhcCCCCeEEecCCCCCChhhh------hhhccCcEEEEEeCCC----CCCccccHHHHHHHHHHHHHcCCce
Q 019899 29 AVEILCFCLADHGNALLVPSPYYPGFDRD------IRFRTGVELIPVHCRS----TDNFAFSITALDQAFNQARKRGVKV 98 (334)
Q Consensus 29 ~~~~~~~~l~~~gd~vl~~~p~~~~~~~~------~~~~~g~~v~~v~~~~----~~~~~~~~~~l~~~l~~~~~~~~~~ 98 (334)
|+..++..+.+|. .++|+-..+.+.+. ++ ..|.+.+-++.++ .+...+ .+++.+.+++.+..+..-
T Consensus 3 a~~~~~~~~~~p~--l~~P~l~V~si~~I~~~~~~Lk-~~Gik~li~DkDNTL~~~~~~~i-~~~~~~~~~~l~~~~~~~ 78 (168)
T PF09419_consen 3 ATLAVFRLLRNPS--LLLPHLYVPSIRDIDFEANHLK-KKGIKALIFDKDNTLTPPYEDEI-PPEYAEWLNELKKQFGKD 78 (168)
T ss_pred hhHHHHHHHcCcc--ccCCCEEcCChhhCCcchhhhh-hcCceEEEEcCCCCCCCCCcCcC-CHHHHHHHHHHHHHCCCC
Confidence 4555666665554 55555544444432 44 5688877777532 122223 355666666665554444
Q ss_pred eEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEE
Q 019899 99 RGILICNPANPVGNIIPRETLYELLDFAREKNIHVIS 135 (334)
Q Consensus 99 ~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~ 135 (334)
++++++ |..|..-+.. -.+...+.+.-|+.++.
T Consensus 79 ~v~IvS---NsaGs~~d~~-~~~a~~~~~~lgIpvl~ 111 (168)
T PF09419_consen 79 RVLIVS---NSAGSSDDPD-GERAEALEKALGIPVLR 111 (168)
T ss_pred eEEEEE---CCCCcccCcc-HHHHHHHHHhhCCcEEE
Confidence 656666 4445544322 34445555667888763
No 432
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=64.70 E-value=9.6 Score=34.00 Aligned_cols=59 Identities=17% Similarity=0.329 Sum_probs=41.2
Q ss_pred ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEE
Q 019899 61 RTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVI 134 (334)
Q Consensus 61 ~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi 134 (334)
..+.++..+.+.++.+|.+.++.+.++-+. . ....+-.++.+|+++|++.|+++||-||
T Consensus 29 ~~KlN~lh~HltDd~~~rle~~~~P~Lt~~------g---------a~~~~~~YT~~di~eiv~yA~~rgI~vI 87 (348)
T cd06562 29 YNKLNVLHWHITDSQSFPLESPSYPELSKK------G---------AYSPSEVYTPEDVKEIVEYARLRGIRVI 87 (348)
T ss_pred HhCCcEEEEeEEcCCCceEeeCCCchhhhc------c---------CcCCCceECHHHHHHHHHHHHHcCCEEE
Confidence 466777777776556666665555443221 1 1134567899999999999999999999
No 433
>cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins. Dispersin B is a soluble beta-N-acetylglucosamidase found in bacteria that hydrolyzes the beta-1,6-linkages of PGA (poly-beta-(1,6)-N-acetylglucosamine), a major component of the extracellular polysaccharide matrix. Lacto-N-biosidase hydrolyzes lacto-N-biose (LNB) type I oligosaccharides at the nonreducing terminus to produce lacto-N-biose as part of the GNB/LNB (galacto-N-biose/lacto-N-biose I) degradation pathway. The lacto-N-biosidase from Bifidobacterium bifidum has this GH20 domain, a carbohydrate binding module 32, and a bacterial immunoglobulin-like domain 2, as well as a YSIRK signal peptide and a G5 membrane anchor at the N and C termini, respectively. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=64.12 E-value=14 Score=32.70 Aligned_cols=26 Identities=19% Similarity=0.525 Sum_probs=23.8
Q ss_pred CcccCCCHHHHHHHHHHHHhcCcEEE
Q 019899 109 PVGNIIPRETLYELLDFAREKNIHVI 134 (334)
Q Consensus 109 ptG~~~~~~~l~~i~~~~~~~~~~vi 134 (334)
+.+-.++.+|+++|++.|+++||-||
T Consensus 74 ~~~~~YT~~di~eiv~yA~~rgI~vI 99 (326)
T cd06564 74 ANDGYYTKEEFKELIAYAKDRGVNII 99 (326)
T ss_pred CCCCcccHHHHHHHHHHHHHcCCeEe
Confidence 45678999999999999999999998
No 434
>PF13727 CoA_binding_3: CoA-binding domain; PDB: 3NKL_B.
Probab=63.52 E-value=23 Score=27.48 Aligned_cols=44 Identities=11% Similarity=0.287 Sum_probs=31.3
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEE
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVI 134 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi 134 (334)
+.+++.+.+++. +++-|+++-|... .++++++.+.|+++++.+.
T Consensus 129 ~~~~l~~~~~~~-----~id~v~ial~~~~------~~~i~~ii~~~~~~~v~v~ 172 (175)
T PF13727_consen 129 DLDDLPELVREH-----DIDEVIIALPWSE------EEQIKRIIEELENHGVRVR 172 (175)
T ss_dssp -GGGHHHHHHHH-----T--EEEE--TTS-------HHHHHHHHHHHHTTT-EEE
T ss_pred CHHHHHHHHHhC-----CCCEEEEEcCccC------HHHHHHHHHHHHhCCCEEE
Confidence 678899999886 8888888877643 6789999999999988765
No 435
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]
Probab=63.15 E-value=23 Score=31.55 Aligned_cols=49 Identities=16% Similarity=0.175 Sum_probs=35.7
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCC-CCCcccC--CCHHHHHHHHHHHHhcCcEEE
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNP-ANPVGNI--IPRETLYELLDFAREKNIHVI 134 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p-~nptG~~--~~~~~l~~i~~~~~~~~~~vi 134 (334)
+++.+..+++. ...+|++..+ -|-.+.- ++.+++++.+++|+++|..++
T Consensus 15 ~l~~l~~ai~~------GADaVY~G~~~~~~R~~a~nfs~~~l~e~i~~ah~~gkk~~ 66 (347)
T COG0826 15 NLEDLKAAIAA------GADAVYIGEKEFGLRRRALNFSVEDLAEAVELAHSAGKKVY 66 (347)
T ss_pred CHHHHHHHHHc------CCCEEEeCCcccccccccccCCHHHHHHHHHHHHHcCCeEE
Confidence 67788888876 5777888766 4444444 888888888888888877443
No 436
>PRK10785 maltodextrin glucosidase; Provisional
Probab=62.74 E-value=32 Score=33.28 Aligned_cols=61 Identities=10% Similarity=0.214 Sum_probs=43.2
Q ss_pred cccHHHHHHHHHHHHHcCCceeEEEEeCC-CCCcccCC-------------CHHHHHHHHHHHHhcCcEEEEecccc
Q 019899 78 AFSITALDQAFNQARKRGVKVRGILICNP-ANPVGNII-------------PRETLYELLDFAREKNIHVISDEIYG 140 (334)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~~~~~~i~~~~p-~nptG~~~-------------~~~~l~~i~~~~~~~~~~vi~D~~~~ 140 (334)
+=|++.+.+.|.-.++- ++.+|+++-. .+|+..-+ +.++++++++.|+++|+.||.|-++.
T Consensus 175 GGDl~GI~~kLdYL~~L--Gv~~I~L~Pif~s~s~hgYd~~Dy~~iDp~~Gt~~df~~Lv~~aH~rGikVilD~V~N 249 (598)
T PRK10785 175 GGDLDGISEKLPYLKKL--GVTALYLNPIFTAPSVHKYDTEDYRHVDPQLGGDAALLRLRHATQQRGMRLVLDGVFN 249 (598)
T ss_pred CcCHHHHHHHHHHHHHc--CCCEEEeCCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 34788888776544332 5777777754 33433222 55789999999999999999999864
No 437
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=62.72 E-value=35 Score=24.59 Aligned_cols=21 Identities=33% Similarity=0.449 Sum_probs=12.8
Q ss_pred CHHHHHHHHHHHHhcCcEEEE
Q 019899 115 PRETLYELLDFAREKNIHVIS 135 (334)
Q Consensus 115 ~~~~l~~i~~~~~~~~~~vi~ 135 (334)
+.++.++|.+.++++|..+.+
T Consensus 98 ~~~~~~~l~~~a~~~~~~~~V 118 (120)
T PF01408_consen 98 TLEEAEELVEAAKEKGVKVMV 118 (120)
T ss_dssp SHHHHHHHHHHHHHHTSCEEE
T ss_pred CHHHHHHHHHHHHHhCCEEEE
Confidence 455666666666666665544
No 438
>COG1587 HemD Uroporphyrinogen-III synthase [Coenzyme metabolism]
Probab=61.65 E-value=37 Score=28.56 Aligned_cols=95 Identities=15% Similarity=0.183 Sum_probs=61.9
Q ss_pred EEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCC--hhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 20 IVLTAGATPAVEILCFCLADHGNALLVPSPYYPG--FDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 20 i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~--~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
++...+.++++...+......|++|+++...-.. ..+.+. ..|.++..+++.....-..+.+.+.+.+... +
T Consensus 102 ~~p~~~~~~~l~~~l~~~~~~~~~vl~~~~~~~r~~l~~~L~-~~G~~v~~~~~Y~~~~~~~~~~~~~~~~~~~-----~ 175 (248)
T COG1587 102 FIPEDGDSEGLLEELPELLKGGKRVLILRGNGGREVLEEKLE-ERGAEVREVEVYRTEPPPLDEATLIELLKLG-----E 175 (248)
T ss_pred cCCCccchHHHHHHhhhhccCCCeEEEEcCCCchHHHHHHHH-hCCCEEEEEeeeeecCCCccHHHHHHHHHhC-----C
Confidence 4444677888888888877668899988755444 555555 6799999888743332233445555556552 7
Q ss_pred eeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcC
Q 019899 98 VRGILICNPANPVGNIIPRETLYELLDFAREKN 130 (334)
Q Consensus 98 ~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~ 130 (334)
..+|+++++.. .+.+.+.+.+.+
T Consensus 176 ~d~v~ftS~~~----------v~~~~~~~~~~~ 198 (248)
T COG1587 176 VDAVVFTSSSA----------VRALLALAPESG 198 (248)
T ss_pred CCEEEEeCHHH----------HHHHHHHccccc
Confidence 77788776642 677777665444
No 439
>KOG1467 consensus Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2) [Translation, ribosomal structure and biogenesis]
Probab=61.50 E-value=65 Score=29.84 Aligned_cols=104 Identities=18% Similarity=0.195 Sum_probs=66.2
Q ss_pred CCCcEEEecCcHHHHHHHHHHhcCCC---CeEEecC-CCCCCh--hhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHH
Q 019899 16 DPSQIVLTAGATPAVEILCFCLADHG---NALLVPS-PYYPGF--DRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFN 89 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l~~~g---d~vl~~~-p~~~~~--~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~ 89 (334)
...++++|-|.+..++.++....+.| ..|+++. |..-+- .+.+. ..|.+..++-+. .+.=.+.
T Consensus 358 ~dgdviltyg~s~vV~~ill~A~~~~k~frVvVVDSRP~~EG~~~lr~Lv-~~GinctYv~I~----------a~syim~ 426 (556)
T KOG1467|consen 358 QDGDVLLTYGSSSVVNMILLEAKELGKKFRVVVVDSRPNLEGRKLLRRLV-DRGINCTYVLIN----------AASYIML 426 (556)
T ss_pred hcCCEEEEecchHHHHHHHHHHHHhCcceEEEEEeCCCCcchHHHHHHHH-HcCCCeEEEEeh----------hHHHHHH
Confidence 45689999998888877766553333 3445553 444332 22333 468888777642 1222222
Q ss_pred HHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEe
Q 019899 90 QARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISD 136 (334)
Q Consensus 90 ~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D 136 (334)
+ -+++++-++.--..|.+++..--..++=+++.++++||+=
T Consensus 427 e------vtkvfLGahailsNG~vysR~GTa~valvAna~nVPVlVC 467 (556)
T KOG1467|consen 427 E------VTKVFLGAHAILSNGAVYSRVGTACVALVANAFNVPVLVC 467 (556)
T ss_pred h------cceeeechhhhhcCcchhhhcchHHHHHHhcccCCCEEEE
Confidence 2 4565666666556799999777777888889999999964
No 440
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=61.00 E-value=72 Score=24.34 Aligned_cols=98 Identities=17% Similarity=0.237 Sum_probs=52.6
Q ss_pred EEecCcHHHH-HHHHHHhcCCCC-eEEecCCC--CCChhhh---hhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 21 VLTAGATPAV-EILCFCLADHGN-ALLVPSPY--YPGFDRD---IRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 21 ~~~~g~~~~~-~~~~~~l~~~gd-~vl~~~p~--~~~~~~~---~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
++..|++.++ ..+...+.+.|. +|++.... ....... +. ..+.++..++++ --+.+++++.++....
T Consensus 3 ~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~-~~~~~~~~~~~D-----~~~~~~~~~~~~~~~~ 76 (167)
T PF00106_consen 3 VLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELK-APGAKITFIECD-----LSDPESIRALIEEVIK 76 (167)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHH-HTTSEEEEEESE-----TTSHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccc-cccccccccccc-----cccccccccccccccc
Confidence 3344444455 334445555554 55544444 1222222 23 356777777753 2366778888877765
Q ss_pred cCCceeEEEEeCCCCCcccCC--CHHHHHHHHH
Q 019899 94 RGVKVRGILICNPANPVGNII--PRETLYELLD 124 (334)
Q Consensus 94 ~~~~~~~i~~~~p~nptG~~~--~~~~l~~i~~ 124 (334)
...+...++.+....+.+... +.+++++..+
T Consensus 77 ~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~ 109 (167)
T PF00106_consen 77 RFGPLDILINNAGIFSDGSLDDLSEEELERVFR 109 (167)
T ss_dssp HHSSESEEEEECSCTTSBSGGGSHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccchhhhhccc
Confidence 556788777776654444433 3345555554
No 441
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=60.96 E-value=92 Score=25.56 Aligned_cols=84 Identities=11% Similarity=0.013 Sum_probs=43.9
Q ss_pred cEEEecCcHHHH-HHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 19 QIVLTAGATPAV-EILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 19 ~i~~~~g~~~~~-~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
..++..|++.++ ..+...|.+.|..|.+............. ..+.++..++++ --+.+.+++++++..+...+
T Consensus 7 ~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~D-----~~~~~~~~~~~~~~~~~~~~ 80 (245)
T PRK12936 7 RKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAA-ELGERVKIFPAN-----LSDRDEVKALGQKAEADLEG 80 (245)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-HhCCceEEEEcc-----CCCHHHHHHHHHHHHHHcCC
Confidence 345555555555 44556667788777665443332222222 233344444431 22566777776665544456
Q ss_pred eeEEEEeCCCC
Q 019899 98 VRGILICNPAN 108 (334)
Q Consensus 98 ~~~i~~~~p~n 108 (334)
+.+++.+....
T Consensus 81 id~vi~~ag~~ 91 (245)
T PRK12936 81 VDILVNNAGIT 91 (245)
T ss_pred CCEEEECCCCC
Confidence 77676665543
No 442
>PRK09189 uroporphyrinogen-III synthase; Validated
Probab=60.25 E-value=43 Score=27.91 Aligned_cols=82 Identities=11% Similarity=0.155 Sum_probs=46.0
Q ss_pred EEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCC--hhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 20 IVLTAGATPAVEILCFCLADHGNALLVPSPYYPG--FDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 20 i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~--~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
++...+..+++...+.....++.+|+++...... ....++ ..|.++..+.+.....-..+.+.+.+.+++ .+
T Consensus 97 ~~~~~~~~e~L~~~~~~~~~~~~~vL~~rg~~~r~~l~~~L~-~~G~~v~~~~vY~~~~~~~~~~~~~~~l~~-----~~ 170 (240)
T PRK09189 97 VIEGGGDGVRLAETVAAALAPTARLLYLAGRPRAPVFEDRLA-AAGIPFRVAECYDMLPVMYSPATLSAILGG-----AP 170 (240)
T ss_pred CcCCCCCHHHHHHHHHHhcCCCCcEEEeccCcccchhHHHHH-hCCCeeEEEEEEEeecCCCChHHHHHHHhc-----CC
Confidence 3444566666665554443467788888654432 344455 567777776653221112344555566654 26
Q ss_pred eeEEEEeCCC
Q 019899 98 VRGILICNPA 107 (334)
Q Consensus 98 ~~~i~~~~p~ 107 (334)
+.+|++.+|.
T Consensus 171 ~d~i~f~S~~ 180 (240)
T PRK09189 171 FDAVLLYSRV 180 (240)
T ss_pred CCEEEEeCHH
Confidence 7777777665
No 443
>PF01902 ATP_bind_4: ATP-binding region; InterPro: IPR002761 This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N-terminal. The structure of Q8U2K6 from SWISSPROT from Pyrococcus furiosus has been resolved to 2.7A and is suggested to be a putative N-type pytophosphatase. In some members of the family e.g. Q12429 from SWISSPROT, this domain is associated with IPR006175 from INTERPRO, another domain of unknown function. Proteins with this uncharacterised domain include two apparent ortholog families in the archaea, one of which is universal among the first four completed archaeal genomes. The domain comprises the full length of the archaeal proteins and the first third of fungal proteins.; PDB: 3RK0_A 3RK1_A 3RJZ_A 2D13_D.
Probab=59.87 E-value=47 Score=27.40 Aligned_cols=99 Identities=15% Similarity=0.219 Sum_probs=53.6
Q ss_pred EEEecCcHHHHHHHHHHhcCCCCeE----EecC-----CCCCC----hhhhhhhccCcEEEEEeCCCCCCccccHHHHHH
Q 019899 20 IVLTAGATPAVEILCFCLADHGNAL----LVPS-----PYYPG----FDRDIRFRTGVELIPVHCRSTDNFAFSITALDQ 86 (334)
Q Consensus 20 i~~~~g~~~~~~~~~~~l~~~gd~v----l~~~-----p~~~~----~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~ 86 (334)
++.-+||-.+..++..++.+ -+.+ +++. +.|.. ...+++ ..|...+.+++.. ...--.+++.+
T Consensus 4 v~l~SGGKDS~lAl~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~-algipl~~~~~~g--~~~~~~~~l~~ 79 (218)
T PF01902_consen 4 VALWSGGKDSCLALYRALRQ-HEVVCLLTMVPEEEDSYMFHGVNIELIEAQAE-ALGIPLIEIPTSG--DEEDYVEDLKE 79 (218)
T ss_dssp EEE--SSHHHHHHHHHHHHT--EEEEEEEEEESTTT-SSS-STTGTCHHHHHH-HHT--EEEEEE-----CCCHHHHHHH
T ss_pred EEEEcCcHHHHHHHHHHHHh-CCccEEEEeccCCCCcccccccCHHHHHHHHH-HCCCCEEEEEccC--ccchhhHHHHH
Confidence 56788998888888777755 4321 1111 11111 112233 5799988888742 11223566777
Q ss_pred HHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEE
Q 019899 87 AFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVI 134 (334)
Q Consensus 87 ~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi 134 (334)
++++. ++.++ .+|.+.+......+-++|.+.|+..+
T Consensus 80 ~l~~~-----~v~~v-------v~GdI~~~~~r~~~e~vc~~lGl~~~ 115 (218)
T PF01902_consen 80 ALKEL-----KVEAV-------VFGDIDSEYQRNWVERVCERLGLEAV 115 (218)
T ss_dssp HHCTC-------SEE-------E--TTS-HHHHHHHHHHHHHCT-EEE
T ss_pred HHHHc-----CCCEE-------EECcCCcHHHHHHHHHHHHHcCCEEE
Confidence 77643 34433 36889999889999999999999877
No 444
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=59.61 E-value=74 Score=24.01 Aligned_cols=53 Identities=17% Similarity=0.095 Sum_probs=35.9
Q ss_pred ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc
Q 019899 61 RTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK 129 (334)
Q Consensus 61 ~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~ 129 (334)
..|.+++++.. ...++++.+++.+. ++++|.++...+. ....++++.+.+++.
T Consensus 29 ~~G~eVi~LG~------~vp~e~i~~~a~~~-----~~d~V~lS~~~~~-----~~~~~~~~~~~L~~~ 81 (137)
T PRK02261 29 EAGFEVINLGV------MTSQEEFIDAAIET-----DADAILVSSLYGH-----GEIDCRGLREKCIEA 81 (137)
T ss_pred HCCCEEEECCC------CCCHHHHHHHHHHc-----CCCEEEEcCcccc-----CHHHHHHHHHHHHhc
Confidence 57888888774 45778888887764 7887776655432 344467777766665
No 445
>PRK06483 dihydromonapterin reductase; Provisional
Probab=59.50 E-value=98 Score=25.37 Aligned_cols=78 Identities=15% Similarity=0.202 Sum_probs=40.0
Q ss_pred EEEecCcHHHH-HHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCce
Q 019899 20 IVLTAGATPAV-EILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKV 98 (334)
Q Consensus 20 i~~~~g~~~~~-~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 98 (334)
.++.+|++.++ ..+...|...|.+|++....-......+. ..|...+..++ -|.+++++.++.....-+++
T Consensus 4 ~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~-------~~~~~~~~~~~~~~~~~~~i 75 (236)
T PRK06483 4 PILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLR-QAGAQCIQADF-------STNAGIMAFIDELKQHTDGL 75 (236)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH-HcCCEEEEcCC-------CCHHHHHHHHHHHHhhCCCc
Confidence 34455555555 33444556678777765433222333333 34544444443 25567777776654443456
Q ss_pred eEEEEeC
Q 019899 99 RGILICN 105 (334)
Q Consensus 99 ~~i~~~~ 105 (334)
..++.+.
T Consensus 76 d~lv~~a 82 (236)
T PRK06483 76 RAIIHNA 82 (236)
T ss_pred cEEEECC
Confidence 7555443
No 446
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=59.48 E-value=77 Score=27.46 Aligned_cols=106 Identities=17% Similarity=0.234 Sum_probs=66.1
Q ss_pred CCCcEEEecCcHHHHHHHHHHhcCCCC--eEEecC--CCCCChhhhhhh-ccCcEEEEEeCCCCCCccccHHHHHHHHHH
Q 019899 16 DPSQIVLTAGATPAVEILCFCLADHGN--ALLVPS--PYYPGFDRDIRF-RTGVELIPVHCRSTDNFAFSITALDQAFNQ 90 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l~~~gd--~vl~~~--p~~~~~~~~~~~-~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~ 90 (334)
..++|++|.|.+..+...+....++|. +|+|.+ |.+.++..+..+ ..|.+...++ | .++-..+.+
T Consensus 161 hsnEviLT~g~SrTV~~FL~~A~kk~Rkf~viVaE~~p~~qgH~~Ak~la~~giettVI~---------d-aaVfA~Msr 230 (353)
T KOG1465|consen 161 HSNEVILTLGSSRTVENFLKHAAKKGRKFRVIVAEGAPNNQGHELAKPLAQAGIETTVIP---------D-AAVFAMMSR 230 (353)
T ss_pred ccCceEEecCccHHHHHHHHHHHhccCceEEEEeecCCcccchHhhHHHHHcCCeeEEec---------c-HHHHHHhhh
Confidence 467899999988877777666555543 455554 444443333220 2466655555 2 445555554
Q ss_pred HHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEec
Q 019899 91 ARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDE 137 (334)
Q Consensus 91 ~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~ 137 (334)
-.|+|+-+..--+.|-+....-...++..++.|-++|++=.
T Consensus 231 ------VnKVIigt~avl~NGgl~~~~G~~~vAlaAk~h~vPv~VlA 271 (353)
T KOG1465|consen 231 ------VNKVIIGTHAVLANGGLRAPSGVHTVALAAKHHSVPVIVLA 271 (353)
T ss_pred ------cceEEEEeeeEecCCCeeccchHHHHHHHHHhcCCcEEEec
Confidence 34666666665555666666667788888899999998653
No 447
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=59.39 E-value=28 Score=31.02 Aligned_cols=65 Identities=12% Similarity=0.090 Sum_probs=41.8
Q ss_pred CCccccHHHHHHHHHHHHHcCCceeEEEEeCC---CCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccc
Q 019899 75 DNFAFSITALDQAFNQARKRGVKVRGILICNP---ANPVGNIIPRETLYELLDFAREKNIHVISDEIYGG 141 (334)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p---~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~ 141 (334)
.+...+++++..+++...++| +.. +++++. +..++.....-+++.+..+.+..+++||+|-.|+.
T Consensus 215 ~G~~~t~ee~~~A~e~i~~~G-n~~-viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~ 282 (352)
T PRK13396 215 RGMAATIDEWLMAAEYILAAG-NPN-VILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGT 282 (352)
T ss_pred CCCCCCHHHHHHHHHHHHHcC-CCe-EEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccC
Confidence 444458899998888766555 445 555544 11222222222388888887777999999998875
No 448
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=58.73 E-value=66 Score=27.64 Aligned_cols=53 Identities=13% Similarity=0.250 Sum_probs=32.9
Q ss_pred CCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc
Q 019899 74 TDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK 129 (334)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~ 129 (334)
+.+..+|.+.+.+.++...+. +.+.+++. .+.--+..++.+|.+++++.+.+.
T Consensus 13 ~~dg~iD~~~~~~~i~~l~~~--Gv~gl~v~-GstGE~~~lt~~Er~~l~~~~~~~ 65 (284)
T cd00950 13 KDDGSVDFDALERLIEFQIEN--GTDGLVVC-GTTGESPTLSDEEHEAVIEAVVEA 65 (284)
T ss_pred CCCCCcCHHHHHHHHHHHHHc--CCCEEEEC-CCCcchhhCCHHHHHHHHHHHHHH
Confidence 344578888888877765543 34444444 333334667778888887766554
No 449
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=58.67 E-value=69 Score=27.68 Aligned_cols=59 Identities=8% Similarity=0.036 Sum_probs=40.1
Q ss_pred CCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc---CcEEEE
Q 019899 74 TDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK---NIHVIS 135 (334)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~vi~ 135 (334)
+++..+|.+.+++.++...+. +++.+++. .++--+..++.+|..++++.+.+. +++||+
T Consensus 13 ~~dg~iD~~~l~~l~~~l~~~--Gv~gi~v~-GstGE~~~Ls~eEr~~l~~~~~~~~~~~~pvi~ 74 (289)
T cd00951 13 DADGSFDEDAYRAHVEWLLSY--GAAALFAA-GGTGEFFSLTPDEYAQVVRAAVEETAGRVPVLA 74 (289)
T ss_pred CCCCCcCHHHHHHHHHHHHHc--CCCEEEEC-cCCcCcccCCHHHHHHHHHHHHHHhCCCCCEEE
Confidence 344589999999888776554 45545443 444456778888988888876553 466664
No 450
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=58.48 E-value=53 Score=27.73 Aligned_cols=94 Identities=17% Similarity=0.258 Sum_probs=57.2
Q ss_pred cEEEecCcHHHHHHHHHHhcCCCCeEEecCC-CCCChhhhhhhccCcEEEEEeCCCCCCccc-cHHHHHHHHHHHHHcCC
Q 019899 19 QIVLTAGATPAVEILCFCLADHGNALLVPSP-YYPGFDRDIRFRTGVELIPVHCRSTDNFAF-SITALDQAFNQARKRGV 96 (334)
Q Consensus 19 ~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p-~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~-~~~~l~~~l~~~~~~~~ 96 (334)
+|.+..|++++-.++-.. .+.|. |+++.- +|..-..... ..+.++.. + .+ +.+.+.+.+++.
T Consensus 2 ~ILvlgGTtE~r~la~~L-~~~g~-v~~sv~t~~g~~~~~~~-~~~~~v~~------G--~lg~~~~l~~~l~~~----- 65 (249)
T PF02571_consen 2 KILVLGGTTEGRKLAERL-AEAGY-VIVSVATSYGGELLKPE-LPGLEVRV------G--RLGDEEGLAEFLREN----- 65 (249)
T ss_pred EEEEEechHHHHHHHHHH-HhcCC-EEEEEEhhhhHhhhccc-cCCceEEE------C--CCCCHHHHHHHHHhC-----
Confidence 478899999998877654 45665 555543 2222111111 12222211 1 35 889999999874
Q ss_pred ceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEE
Q 019899 97 KVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVI 134 (334)
Q Consensus 97 ~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi 134 (334)
++++| ...++|....++ +.+.+.|++.|++.+
T Consensus 66 ~i~~v--IDATHPfA~~is----~na~~a~~~~~ipyl 97 (249)
T PF02571_consen 66 GIDAV--IDATHPFAAEIS----QNAIEACRELGIPYL 97 (249)
T ss_pred CCcEE--EECCCchHHHHH----HHHHHHHhhcCcceE
Confidence 66643 344667655555 567778899998877
No 451
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=58.47 E-value=17 Score=35.07 Aligned_cols=31 Identities=26% Similarity=0.101 Sum_probs=27.3
Q ss_pred CCHHHHHHHHHHHHhcCcEEEEecccccccc
Q 019899 114 IPRETLYELLDFAREKNIHVISDEIYGGSIF 144 (334)
Q Consensus 114 ~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~ 144 (334)
=+.++++++++-|++.||-||+|=+|.-|.-
T Consensus 211 GtPedfk~fVD~aH~~GIgViLD~V~~HF~~ 241 (628)
T COG0296 211 GTPEDFKALVDAAHQAGIGVILDWVPNHFPP 241 (628)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEecCCcCCC
Confidence 3788999999999999999999999986543
No 452
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=58.05 E-value=1.2e+02 Score=27.93 Aligned_cols=96 Identities=17% Similarity=0.238 Sum_probs=58.2
Q ss_pred CcEEEecCcHHHHHHHHHHhc---------CCCCeEEecCCCCCChhh---------hhhhccCcEEEE-EeCCCCCCcc
Q 019899 18 SQIVLTAGATPAVEILCFCLA---------DHGNALLVPSPYYPGFDR---------DIRFRTGVELIP-VHCRSTDNFA 78 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l~---------~~gd~vl~~~p~~~~~~~---------~~~~~~g~~v~~-v~~~~~~~~~ 78 (334)
+-|++++|+.......+.-+. +++|.|++..+..+++.. .+. ..|.+++. +.+ ..+
T Consensus 287 ~~vii~tg~~g~~~~~l~~~~~~~~~~i~l~~~d~vi~s~~~~~G~~~~~~~~~~~~~~~-~~~~~~~~~~h~----SgH 361 (422)
T TIGR00649 287 NYLIITTGSQGEPYAALTRIANNEHEQIRIRKGDTVVFSAPPIPGNENIAVSILLDIRLN-EVGARVIKRIHV----SGH 361 (422)
T ss_pred cEEEEEeCCCCcHHHHHHHHhCCCCCcEEeCCCCEEEEECCCCCcHHHHHHHHHHHHHHH-hcCCEEEeceEe----cCC
Confidence 346666666544433333332 367889999877777661 122 35666643 332 235
Q ss_pred ccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCc
Q 019899 79 FSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNI 131 (334)
Q Consensus 79 ~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~ 131 (334)
-+-++|...++.. +++.++-++... ..+....+++++.|+
T Consensus 362 a~~~dl~~~i~~~-----~Pk~~ipvHge~--------~~~~~~~~~a~~~g~ 401 (422)
T TIGR00649 362 ASQEDHKLLLRLL-----KPKYIIPVHGEY--------RMLINHTKLAEEEGY 401 (422)
T ss_pred CCHHHHHHHHHHh-----CCCEEEecCCcH--------HHHHHHHHHHHHcCC
Confidence 6788888888875 788777665542 236667777766654
No 453
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=58.02 E-value=1.2e+02 Score=26.18 Aligned_cols=14 Identities=14% Similarity=0.254 Sum_probs=9.1
Q ss_pred CCcEEEEecccccC
Q 019899 163 KDRVHIIYGLSKDL 176 (334)
Q Consensus 163 ~~~~~~~~s~sK~~ 176 (334)
....+++.|++...
T Consensus 172 gp~~vlVTS~~~~~ 185 (281)
T COG2240 172 GPKIVLVTSLSRAG 185 (281)
T ss_pred CCCEEEEecccccC
Confidence 35667778887644
No 454
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=57.79 E-value=79 Score=25.28 Aligned_cols=89 Identities=12% Similarity=0.057 Sum_probs=41.9
Q ss_pred HHHHHHHhcC--CCCeEEecCCCCCChhhhhhhcc--CcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeC
Q 019899 30 VEILCFCLAD--HGNALLVPSPYYPGFDRDIRFRT--GVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICN 105 (334)
Q Consensus 30 ~~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~~--g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~ 105 (334)
..-++..+.+ ++-.|+++..+-.++....+ .. +..+.++|++ ..-.+.+.++.. ++++++++.
T Consensus 37 ~~~Li~~l~~~~p~~~illT~~T~tg~~~~~~-~~~~~v~~~~~P~D-------~~~~~~rfl~~~-----~P~~~i~~E 103 (186)
T PF04413_consen 37 ARPLIKRLRKQRPDLRILLTTTTPTGREMARK-LLPDRVDVQYLPLD-------FPWAVRRFLDHW-----RPDLLIWVE 103 (186)
T ss_dssp HHHHHHHHTT---TS-EEEEES-CCHHHHHHG-G-GGG-SEEE---S-------SHHHHHHHHHHH-------SEEEEES
T ss_pred HHHHHHHHHHhCCCCeEEEEecCCchHHHHHH-hCCCCeEEEEeCcc-------CHHHHHHHHHHh-----CCCEEEEEc
Confidence 3344455543 57789999887777766554 32 3556667752 245566677766 677776664
Q ss_pred CCCCcccCCCHHHHHHHHHHHHhcCcEEE-Eeccccc
Q 019899 106 PANPVGNIIPRETLYELLDFAREKNIHVI-SDEIYGG 141 (334)
Q Consensus 106 p~nptG~~~~~~~l~~i~~~~~~~~~~vi-~D~~~~~ 141 (334)
.. -+..++..|++.|+.++ ++.-.+.
T Consensus 104 tE----------lWPnll~~a~~~~ip~~LvNarls~ 130 (186)
T PF04413_consen 104 TE----------LWPNLLREAKRRGIPVVLVNARLSE 130 (186)
T ss_dssp --------------HHHHHH-----S-EEEEEE----
T ss_pred cc----------cCHHHHHHHhhcCCCEEEEeeeecc
Confidence 32 26788888999998877 5654443
No 455
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=56.95 E-value=1.2e+02 Score=26.10 Aligned_cols=102 Identities=14% Similarity=0.177 Sum_probs=56.4
Q ss_pred CCcEEEecCcHHHHHHHHHHhcCCC--CeEEecC--CCCCChhhhhhh-ccCcEEEEEeCCCCCCccccHHHHHHHHHHH
Q 019899 17 PSQIVLTAGATPAVEILCFCLADHG--NALLVPS--PYYPGFDRDIRF-RTGVELIPVHCRSTDNFAFSITALDQAFNQA 91 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~~~g--d~vl~~~--p~~~~~~~~~~~-~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~ 91 (334)
.+++++|.+-+.....++....+.| -+|++.+ |.+.+..-..++ ..|.++..++- + .+--.++
T Consensus 109 ~g~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~la~eL~~~GI~vtlI~D---s-------a~~~~m~-- 176 (275)
T PRK08335 109 DGDVIITHSFSSAVLEILKTAKRKGKRFKVILTESAPDYEGLALANELEFLGIEFEVITD---A-------QLGLFAK-- 176 (275)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCceEEEEecCCCchhHHHHHHHHHHCCCCEEEEec---c-------HHHHHHH--
Confidence 4567888776655555555544444 3566664 554443332220 25777777661 1 1222233
Q ss_pred HHcCCceeEEEEeCC-CCCcccCCCHHHHHHHHHHHHhcCcEEEE
Q 019899 92 RKRGVKVRGILICNP-ANPVGNIIPRETLYELLDFAREKNIHVIS 135 (334)
Q Consensus 92 ~~~~~~~~~i~~~~p-~nptG~~~~~~~l~~i~~~~~~~~~~vi~ 135 (334)
++..+++..- -...|.+++.----.++-.|+.|++++++
T Consensus 177 -----~vd~VivGAD~I~~nG~v~NKiGT~~lA~~Ak~~~vPfyV 216 (275)
T PRK08335 177 -----EATLALVGADNVTRDGYVVNKAGTYLLALACHDNGVPFYV 216 (275)
T ss_pred -----hCCEEEECccEEecCCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 3444544322 33456666555556677778999999986
No 456
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=56.81 E-value=13 Score=32.48 Aligned_cols=24 Identities=29% Similarity=0.617 Sum_probs=22.3
Q ss_pred ccCCCHHHHHHHHHHHHhcCcEEE
Q 019899 111 GNIIPRETLYELLDFAREKNIHVI 134 (334)
Q Consensus 111 G~~~~~~~l~~i~~~~~~~~~~vi 134 (334)
|-.++.+|+++|++.|+++||-||
T Consensus 62 ~~~yT~~di~elv~yA~~rgI~vI 85 (311)
T cd06570 62 GLYYTQEQIREVVAYARDRGIRVV 85 (311)
T ss_pred CCccCHHHHHHHHHHHHHcCCEEE
Confidence 456999999999999999999998
No 457
>cd06569 GH20_Sm-chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=56.80 E-value=19 Score=33.32 Aligned_cols=78 Identities=19% Similarity=0.324 Sum_probs=46.5
Q ss_pred hhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc---eeEE---EEeCC--CCCcccCCCHHHHHHHHHHHH
Q 019899 56 RDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK---VRGI---LICNP--ANPVGNIIPRETLYELLDFAR 127 (334)
Q Consensus 56 ~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~---~~~i---~~~~p--~nptG~~~~~~~l~~i~~~~~ 127 (334)
+.+. ..+.++-.+.+.++.+|.+.++.+-++-+....++.. ...+ +-..+ ..+.+-.++.+|+++|++.|+
T Consensus 29 d~ma-~~K~N~lHlHLtDdqgwriei~~~P~Lt~~ga~r~~~~~~~~~~~~~~~~~~~~~~~~~g~YT~~di~eiv~yA~ 107 (445)
T cd06569 29 DQMA-AYKLNKLHLHLTDDEGWRLEIPGLPELTEVGAKRCHDLSETTCLLPQLGSGPDTNNSGSGYYSRADYIEILKYAK 107 (445)
T ss_pred HHHH-HhCCceEEEEeecCCCcceeccCCchhhhcccccccccccccccccccccCcccCcccCCccCHHHHHHHHHHHH
Confidence 3344 4677888888876677777766655443321000000 0000 00011 124456799999999999999
Q ss_pred hcCcEEE
Q 019899 128 EKNIHVI 134 (334)
Q Consensus 128 ~~~~~vi 134 (334)
++||-||
T Consensus 108 ~rgI~VI 114 (445)
T cd06569 108 ARHIEVI 114 (445)
T ss_pred HcCCEEE
Confidence 9999998
No 458
>COG0074 SucD Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]
Probab=56.49 E-value=53 Score=28.15 Aligned_cols=75 Identities=25% Similarity=0.446 Sum_probs=53.9
Q ss_pred CCeEEecCCCCCChhhhhhhccC--cEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHH
Q 019899 41 GNALLVPSPYYPGFDRDIRFRTG--VELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRET 118 (334)
Q Consensus 41 gd~vl~~~p~~~~~~~~~~~~~g--~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~ 118 (334)
|...+...|.|....++.+ ..+ ..+++||- .+-.|++.++++. .++++++.+-+ .|..|
T Consensus 44 gG~~~~g~PVf~tV~EA~~-~~~a~~svI~Vp~------~~aadai~EAida------~i~liv~ITEg------IP~~D 104 (293)
T COG0074 44 GGQTILGLPVFNTVEEAVK-ETGANASVIFVPP------PFAADAILEAIDA------GIKLVVIITEG------IPVLD 104 (293)
T ss_pred CceEEcCccHHHHHHHHHH-hhCCCEEEEecCc------HHHHHHHHHHHhC------CCcEEEEEeCC------CCHHH
Confidence 3455666888888888887 445 45666663 2346777777775 67877766555 45677
Q ss_pred HHHHHHHHHhcCcEEE
Q 019899 119 LYELLDFAREKNIHVI 134 (334)
Q Consensus 119 l~~i~~~~~~~~~~vi 134 (334)
..++.+.+++.+.+++
T Consensus 105 ~~~~~~~a~~~g~~ii 120 (293)
T COG0074 105 MLELKRYAREKGTRLI 120 (293)
T ss_pred HHHHHHHHHhcCCEEE
Confidence 8899999999999988
No 459
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=56.16 E-value=47 Score=28.11 Aligned_cols=70 Identities=14% Similarity=0.318 Sum_probs=41.2
Q ss_pred ChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCC--CCCcccCCCHHHHHHHHHHHHhcC
Q 019899 53 GFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNP--ANPVGNIIPRETLYELLDFAREKN 130 (334)
Q Consensus 53 ~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p--~nptG~~~~~~~l~~i~~~~~~~~ 130 (334)
.....++ .+--+.+.-|+-+..+ ..+.+++.+. +..++++-.. .+| .-.+.+++|++++++.+
T Consensus 68 ~Aa~vIK-sYsPdLIVHP~l~~~~---av~~i~k~L~-------RlhavVIGPGLGRdp----~~~k~i~~iley~~~~d 132 (306)
T KOG3974|consen 68 EAAVVIK-SYSPDLIVHPVLDQEN---AVDIIEKLLQ-------RLHAVVIGPGLGRDP----AILKEIAKILEYLRGKD 132 (306)
T ss_pred hHHHHHh-hcCCceeecccccCCc---hHhHHHHHHh-------heeEEEECCCCCCCH----HHHHHHHHHHHHHhcCC
Confidence 3444444 4444444444322111 5666777676 4665555433 222 23456899999999999
Q ss_pred cEEEEec
Q 019899 131 IHVISDE 137 (334)
Q Consensus 131 ~~vi~D~ 137 (334)
+++++|.
T Consensus 133 vP~VIDa 139 (306)
T KOG3974|consen 133 VPLVIDA 139 (306)
T ss_pred CcEEEcC
Confidence 9999994
No 460
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=56.11 E-value=62 Score=28.13 Aligned_cols=118 Identities=19% Similarity=0.219 Sum_probs=61.1
Q ss_pred EEEecCc-HHHHHHHHHHhcCCC-C-eEEecCCCCCChhhhhhhccCc-EEEEEeCCCCCCccccHHHHHHHHHHHHHcC
Q 019899 20 IVLTAGA-TPAVEILCFCLADHG-N-ALLVPSPYYPGFDRDIRFRTGV-ELIPVHCRSTDNFAFSITALDQAFNQARKRG 95 (334)
Q Consensus 20 i~~~~g~-~~~~~~~~~~l~~~g-d-~vl~~~p~~~~~~~~~~~~~g~-~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~ 95 (334)
+++|.|+ .-+-+.+-..+-+.. + .+.++-.+|.+....+....+. ....+.. +--|.+.+.+.+++.
T Consensus 3 iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~-----DI~D~~~v~~~~~~~---- 73 (340)
T COG1088 3 ILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQG-----DICDRELVDRLFKEY---- 73 (340)
T ss_pred EEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEec-----cccCHHHHHHHHHhc----
Confidence 4455443 222233333343333 3 3667778999888776634332 3333332 124678888888864
Q ss_pred CceeEEEEeCC-CCCcccCCCHH--------HHHHHHHHHHhcCc-----EEEEeccccccccCCC
Q 019899 96 VKVRGILICNP-ANPVGNIIPRE--------TLYELLDFAREKNI-----HVISDEIYGGSIFGNE 147 (334)
Q Consensus 96 ~~~~~i~~~~p-~nptG~~~~~~--------~l~~i~~~~~~~~~-----~vi~D~~~~~~~~~~~ 147 (334)
++.+|+--.. +...-.+.+++ ---.|++.++++.. .|=.||+|+++..+..
T Consensus 74 -~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~ 138 (340)
T COG1088 74 -QPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDD 138 (340)
T ss_pred -CCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCC
Confidence 5554432222 11111111111 12456777777762 2337999999876543
No 461
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=56.08 E-value=67 Score=22.40 Aligned_cols=68 Identities=13% Similarity=0.214 Sum_probs=43.6
Q ss_pred CChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCc
Q 019899 52 PGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNI 131 (334)
Q Consensus 52 ~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~ 131 (334)
..|.+.++ ..|.+.... ..+++..-....+++.+. ++.+|++..-. .+.+-...+-+.|+++++
T Consensus 13 ~~~~~~~~-~~G~~~~~h--g~~~~~~~~~~~l~~~i~-------~aD~VIv~t~~------vsH~~~~~vk~~akk~~i 76 (97)
T PF10087_consen 13 RRYKRILE-KYGGKLIHH--GRDGGDEKKASRLPSKIK-------KADLVIVFTDY------VSHNAMWKVKKAAKKYGI 76 (97)
T ss_pred HHHHHHHH-HcCCEEEEE--ecCCCCccchhHHHHhcC-------CCCEEEEEeCC------cChHHHHHHHHHHHHcCC
Confidence 34566666 788888777 113433334445777665 45665554332 345568888899999999
Q ss_pred EEEE
Q 019899 132 HVIS 135 (334)
Q Consensus 132 ~vi~ 135 (334)
+++.
T Consensus 77 p~~~ 80 (97)
T PF10087_consen 77 PIIY 80 (97)
T ss_pred cEEE
Confidence 9884
No 462
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=55.19 E-value=89 Score=26.38 Aligned_cols=92 Identities=14% Similarity=0.126 Sum_probs=59.8
Q ss_pred CcEEEecCcHHHHHHHHHHhcCCCCeEEecCCC-CCChhhhhhhccCcEEEEEeCCCCCCccc-cHHHHHHHHHHHHHcC
Q 019899 18 SQIVLTAGATPAVEILCFCLADHGNALLVPSPY-YPGFDRDIRFRTGVELIPVHCRSTDNFAF-SITALDQAFNQARKRG 95 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~-~~~~~~~~~~~~g~~v~~v~~~~~~~~~~-~~~~l~~~l~~~~~~~ 95 (334)
..|.+-.|++++-.++-.. .+.|..|++..-+ |.. .. ..+..+.. ..+ |.+.+++.+++.
T Consensus 3 ~~IlvlgGT~egr~la~~L-~~~g~~v~~Svat~~g~----~~-~~~~~v~~--------G~l~~~~~l~~~l~~~---- 64 (248)
T PRK08057 3 PRILLLGGTSEARALARAL-AAAGVDIVLSLAGRTGG----PA-DLPGPVRV--------GGFGGAEGLAAYLREE---- 64 (248)
T ss_pred ceEEEEechHHHHHHHHHH-HhCCCeEEEEEccCCCC----cc-cCCceEEE--------CCCCCHHHHHHHHHHC----
Confidence 4688999999999887544 3456666666433 333 22 33433322 135 889999999874
Q ss_pred CceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEE
Q 019899 96 VKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVI 134 (334)
Q Consensus 96 ~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi 134 (334)
++++| ...++|....++ +.+.+.|++.|++.+
T Consensus 65 -~i~~V--IDATHPfA~~is----~~a~~ac~~~~ipyi 96 (248)
T PRK08057 65 -GIDLV--IDATHPYAAQIS----ANAAAACRALGIPYL 96 (248)
T ss_pred -CCCEE--EECCCccHHHHH----HHHHHHHHHhCCcEE
Confidence 77743 344567655554 566778888888877
No 463
>PRK12313 glycogen branching enzyme; Provisional
Probab=55.14 E-value=37 Score=33.12 Aligned_cols=27 Identities=30% Similarity=0.321 Sum_probs=24.6
Q ss_pred CHHHHHHHHHHHHhcCcEEEEeccccc
Q 019899 115 PRETLYELLDFAREKNIHVISDEIYGG 141 (334)
Q Consensus 115 ~~~~l~~i~~~~~~~~~~vi~D~~~~~ 141 (334)
+.++++++++.|+++||.||.|-++.-
T Consensus 218 t~~d~k~lv~~~H~~Gi~VilD~V~nH 244 (633)
T PRK12313 218 TPEDFMYLVDALHQNGIGVILDWVPGH 244 (633)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 678999999999999999999998754
No 464
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=55.13 E-value=43 Score=24.81 Aligned_cols=59 Identities=25% Similarity=0.428 Sum_probs=41.1
Q ss_pred CcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEE--eCC---CCCcccCCCHHHHHHHHHHHHhcCc
Q 019899 63 GVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILI--CNP---ANPVGNIIPRETLYELLDFAREKNI 131 (334)
Q Consensus 63 g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~--~~p---~nptG~~~~~~~l~~i~~~~~~~~~ 131 (334)
+..++.+|+ ...+|++.+.+++++ ....|++ |.| ++..|.......+..+.++..+.|+
T Consensus 28 ~vriIrvpC----~Grv~~~~il~Af~~------GADGV~V~gC~~g~Ch~~~Gn~~a~~Rv~~~k~~L~~~Gi 91 (124)
T PF02662_consen 28 NVRIIRVPC----SGRVDPEFILRAFEK------GADGVLVAGCHPGDCHYREGNYRAEKRVERLKKLLEELGI 91 (124)
T ss_pred CeEEEEccC----CCccCHHHHHHHHHc------CCCEEEEeCCCCCCCCcchhhHHHHHHHHHHHHHHHHcCC
Confidence 356667775 347999999999997 5666666 333 4477877777777777777666543
No 465
>PRK06372 translation initiation factor IF-2B subunit delta; Provisional
Probab=55.07 E-value=1.3e+02 Score=25.48 Aligned_cols=100 Identities=13% Similarity=0.217 Sum_probs=60.2
Q ss_pred CcEEEecCcHHHHHHHHHHhcCCCCeEEecC--CCCCChhhhhhh-ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 18 SQIVLTAGATPAVEILCFCLADHGNALLVPS--PYYPGFDRDIRF-RTGVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~--p~~~~~~~~~~~-~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
+++++|-|.+..+..++... +++.+|++.+ |.+.+..-...+ ..|.++..++- ..+.-.+.
T Consensus 87 ~dvILT~s~S~~v~~~l~~~-~~~~~V~v~ESrP~~eG~~~a~~L~~~GI~vtli~D----------sa~~~~m~----- 150 (253)
T PRK06372 87 DSVIGTISSSQVLKAFISSS-EKIKSVYILESRPMLEGIDMAKLLVKSGIDVVLLTD----------ASMCEAVL----- 150 (253)
T ss_pred CCEEEEeCCcHHHHHHHHhc-CCCCEEEEecCCCchHHHHHHHHHHHCCCCEEEEeh----------hHHHHHHH-----
Confidence 46999999887877776543 3435676664 444442222110 25777776651 12233333
Q ss_pred CCceeEEEEeCC-CCCcccCCCHHHHHHHHHHHHhcCcEEEE
Q 019899 95 GVKVRGILICNP-ANPVGNIIPRETLYELLDFAREKNIHVIS 135 (334)
Q Consensus 95 ~~~~~~i~~~~p-~nptG~~~~~~~l~~i~~~~~~~~~~vi~ 135 (334)
++..+++..- -...|.+++.---..++-.|++++++|++
T Consensus 151 --~vd~VlvGAd~V~~nG~v~nkvGT~~~Al~A~~~~vPv~V 190 (253)
T PRK06372 151 --NVDAVIVGSDSVLYDGGLIHKNGTFPLALCARYLKKPFYS 190 (253)
T ss_pred --hCCEEEECccEEecCCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 3554555433 34667777766667777788999999997
No 466
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=54.98 E-value=1.2e+02 Score=25.15 Aligned_cols=81 Identities=14% Similarity=0.118 Sum_probs=41.0
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
..++..|++.++- .+...|.+.|.+|++..-.-......+. ..+...+..++ -|.+.++++++......++
T Consensus 8 k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~-~~~~~~~~~Dl-------~~~~~~~~~~~~~~~~~~~ 79 (255)
T PRK06463 8 KVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELR-EKGVFTIKCDV-------GNRDQVKKSKEVVEKEFGR 79 (255)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-hCCCeEEEecC-------CCHHHHHHHHHHHHHHcCC
Confidence 4555555555664 4455566778777664221111122222 22333433343 3567777777665544446
Q ss_pred eeEEEEeCCC
Q 019899 98 VRGILICNPA 107 (334)
Q Consensus 98 ~~~i~~~~p~ 107 (334)
+..++.+...
T Consensus 80 id~li~~ag~ 89 (255)
T PRK06463 80 VDVLVNNAGI 89 (255)
T ss_pred CCEEEECCCc
Confidence 7766655443
No 467
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=54.98 E-value=18 Score=32.40 Aligned_cols=74 Identities=19% Similarity=0.264 Sum_probs=43.3
Q ss_pred ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeE-EEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEE
Q 019899 61 RTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRG-ILICNPANPVGNIIPRETLYELLDFAREKNIHVI 134 (334)
Q Consensus 61 ~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi 134 (334)
..+.++..+.+.++.+|.+.++.+-+.-+...-++....- --......+.|-.++.+|+++|++.|+++||-||
T Consensus 29 ~~K~N~lhlHltDdq~~rle~~~~P~Lt~~ga~~~~~~~~~~~~~~~~~~~~~~YT~~di~eiv~yA~~rgI~VI 103 (357)
T cd06563 29 LYKLNVFHWHLTDDQGWRIEIKKYPKLTEVGAWRGPTEIGLPQGGGDGTPYGGFYTQEEIREIVAYAAERGITVI 103 (357)
T ss_pred HhccceEEEeeecCCCceecccCcchhhhcccccCcccccccccccCCCccCceECHHHHHHHHHHHHHcCCEEE
Confidence 4677777777766666666655554432110000000000 0000112355778999999999999999999999
No 468
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=54.54 E-value=65 Score=27.33 Aligned_cols=95 Identities=15% Similarity=0.174 Sum_probs=56.0
Q ss_pred cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCce
Q 019899 19 QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKV 98 (334)
Q Consensus 19 ~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 98 (334)
.|++..|++++-.++- .|.+.|..|++..-+-..-. .+. ..|...+... .+|-+++.+.+++. ++
T Consensus 2 ~ILvlGGT~egr~la~-~L~~~g~~v~~s~~t~~~~~-~~~-~~g~~~v~~g-------~l~~~~l~~~l~~~-----~i 66 (256)
T TIGR00715 2 TVLLMGGTVDSRAIAK-GLIAQGIEILVTVTTSEGKH-LYP-IHQALTVHTG-------ALDPQELREFLKRH-----SI 66 (256)
T ss_pred eEEEEechHHHHHHHH-HHHhCCCeEEEEEccCCccc-ccc-ccCCceEEEC-------CCCHHHHHHHHHhc-----CC
Confidence 4788888888666554 44456777776654332221 122 2332222222 35778888888874 67
Q ss_pred eEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEE
Q 019899 99 RGILICNPANPVGNIIPRETLYELLDFAREKNIHVI 134 (334)
Q Consensus 99 ~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi 134 (334)
++|+ ...+|....++ +.+.+.|++.|++.+
T Consensus 67 ~~VI--DAtHPfA~~is----~~a~~a~~~~~ipyl 96 (256)
T TIGR00715 67 DILV--DATHPFAAQIT----TNATAVCKELGIPYV 96 (256)
T ss_pred CEEE--EcCCHHHHHHH----HHHHHHHHHhCCcEE
Confidence 7433 34556555444 556678888888877
No 469
>PRK15452 putative protease; Provisional
Probab=53.65 E-value=40 Score=31.19 Aligned_cols=50 Identities=18% Similarity=0.183 Sum_probs=26.1
Q ss_pred eEEecCCCCCChhhhhhhccCcEEEEEeCCCCC----CccccHHHHHHHHHHHHHc
Q 019899 43 ALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTD----NFAFSITALDQAFNQARKR 94 (334)
Q Consensus 43 ~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~----~~~~~~~~l~~~l~~~~~~ 94 (334)
++++|..+......++ ..|++-+++....-+ ...++.++++++++-...+
T Consensus 5 eLlapag~~e~l~aAi--~~GADaVY~G~~~~~~R~~~~~f~~edl~eav~~ah~~ 58 (443)
T PRK15452 5 ELLSPAGTLKNMRYAF--AYGADAVYAGQPRYSLRVRNNEFNHENLALGINEAHAL 58 (443)
T ss_pred EEEEECCCHHHHHHHH--HCCCCEEEECCCccchhhhccCCCHHHHHHHHHHHHHc
Confidence 3555555544444333 367777777642100 1234567777776654333
No 470
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6
Probab=53.60 E-value=53 Score=24.62 Aligned_cols=20 Identities=30% Similarity=0.383 Sum_probs=17.2
Q ss_pred CHHHHHHHHHHHHhcCcEEE
Q 019899 115 PRETLYELLDFAREKNIHVI 134 (334)
Q Consensus 115 ~~~~l~~i~~~~~~~~~~vi 134 (334)
..+-+.++++.|++.||.|+
T Consensus 42 ~~Dllge~v~a~h~~Girv~ 61 (132)
T PF14871_consen 42 KRDLLGEQVEACHERGIRVP 61 (132)
T ss_pred CcCHHHHHHHHHHHCCCEEE
Confidence 34568999999999999988
No 471
>PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3.2.1.52 from EC); lacto-N-biosidase (3.2.1.140 from EC). Carbonyl oxygen of the C-2 acetamido group of the substrate acts as the catalytic nucleophile/base in this family of enzymes. In the brain and other tissues, beta-hexosaminidase A degrades GM2 gangliosides; specifically, the enzyme hydrolyses terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides. There are 3 forms of beta-hexosaminidase: hexosaminidase A is a trimer, with one alpha, one beta-A and one beta-B chain; hexosaminidase B is a tetramer of two beta-A and two beta-B chains; and hexosaminidase S is a homodimer of alpha chains. The two beta chains are derived from the cleavage of a precursor. Mutations in the beta-chain lead to Sandhoff disease, a lysosomal storage disorder characterised by accumulation of GM2 ganglioside [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 3RPM_A 1C7T_A 1QBA_A 1QBB_A 1C7S_A 3RCN_A 2YL8_A 2YL6_A 2YLL_A 2YL5_C ....
Probab=53.53 E-value=9.8 Score=33.85 Aligned_cols=62 Identities=21% Similarity=0.447 Sum_probs=37.8
Q ss_pred ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEE
Q 019899 61 RTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVI 134 (334)
Q Consensus 61 ~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi 134 (334)
..+.++..+.+.++.+|.+.+..+.+.-... ..+ ++.+ |..++.+|+++|++.|+++||-||
T Consensus 29 ~~k~N~lhlhl~D~~~~~~~~~~~p~l~~~g-----a~~------~~~~-~~~yT~~di~~lv~yA~~~gI~VI 90 (351)
T PF00728_consen 29 YYKLNVLHLHLSDDQGFRLESKSYPELTEKG-----AYR------PSDA-GGYYTKEDIRELVAYAKERGIEVI 90 (351)
T ss_dssp HTT-SEEEEEEESSTCB-BEBSTSTHHHHTT-----TES------TTCT-ESEBEHHHHHHHHHHHHHTT-EEE
T ss_pred HcCCcEEEEEEecCCCCccccCCCccccccC-----ccc------cccc-cccCCHHHHHHHHHHHHHcCCcee
Confidence 4567777777765556666554444433220 000 1112 448999999999999999999999
No 472
>PF00265 TK: Thymidine kinase; InterPro: IPR001267 Thymidine kinase (TK) (2.7.1.21 from EC) is an ubiquitous enzyme that catalyzes the ATP-dependent phosphorylation of thymidine. Two different families of Thymidine kinase have been identified [, ] and are represented in this entry; one groups together Thymidine kinase from herpesviruses, as well as cytosolic thymidylate kinases and the second family groups Thymidine kinase from various sources that include, vertebrates, bacteria, the Bacteriophage T4, poxviruses, African swine fever virus (ASFV) and Fish lymphocystis disease virus (FLDV). The major capsid protein of insect iridescent viruses also belongs to this family.; GO: 0004797 thymidine kinase activity, 0005524 ATP binding; PDB: 1XX6_B 2J9R_A 2J87_B 3E2I_A 2JA1_A 2UZ3_B 2B8T_B 2WVJ_A 1W4R_F 1XBT_F ....
Probab=53.40 E-value=32 Score=27.26 Aligned_cols=121 Identities=17% Similarity=0.186 Sum_probs=69.1
Q ss_pred CcHHHHHHHHHHhcCCCCeEEecCCCCCChh---hhhhhccCcEEEEE--eCCCCCCccccHHHHHHHHHHHHHcCCcee
Q 019899 25 GATPAVEILCFCLADHGNALLVPSPYYPGFD---RDIRFRTGVELIPV--HCRSTDNFAFSITALDQAFNQARKRGVKVR 99 (334)
Q Consensus 25 g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~---~~~~~~~g~~v~~v--~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 99 (334)
|=|.-+...+..+...|.+|++..|....-. .... +.|.....+ +. -++.++.+.+.. ++.
T Consensus 13 GKS~eLi~~~~~~~~~~~~v~~~kp~~D~R~~~~~I~s-~~g~~~~~~~~~~-------~~~~~~~~~~~~------~~d 78 (176)
T PF00265_consen 13 GKSTELIRRIHRYEIAGKKVLVFKPAIDTRYGEDKIVS-HDGISLEAIVDPI-------DNLFEIIDILEN------DYD 78 (176)
T ss_dssp SHHHHHHHHHHHHHHTT-EEEEEEESTSCCCCSSEEEH-TTSCEEEEESSEE-------SSGGGGGGGCCT------TCS
T ss_pred hhHHHHHHHHHHHHhCCCeEEEEEecccCcCCCCeEEe-cCCCcccccccch-------hhHHHHHHHhcc------CCC
Confidence 4344444444445557778888777554321 2334 567666655 22 123333333332 488
Q ss_pred EEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEec
Q 019899 100 GILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYG 171 (334)
Q Consensus 100 ~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 171 (334)
+|++...+. ++ +++.++++.+...|+.|++=.--.+ |.+.++.+...+.+- .+.+.-+.+
T Consensus 79 vI~IDEaQF-----f~-~~i~~l~~~~~~~g~~Vi~~GL~~d--f~~~~F~~~~~Ll~~----Ad~i~kl~a 138 (176)
T PF00265_consen 79 VIGIDEAQF-----FD-EQIVQLVEILANKGIPVICAGLDTD--FRGEPFGGSPRLLPL----ADKITKLKA 138 (176)
T ss_dssp EEEESSGGG-----ST-TTHHHHHHHHHHTT-EEEEEEESB---TTSSB-TTHHHHHHH-----SEEEEE-E
T ss_pred EEEEechHh-----hH-HHHHHHHHHHHhCCCeEEEEeeCCc--cccCcchhHHHHHhh----CCeEEEecc
Confidence 888887776 55 6688999999999999997654444 446677776666652 455555543
No 473
>cd03110 Fer4_NifH_child This protein family's function is unkown. It contains nucleotide binding site. It uses NTP as energy source to transfer electron or ion.
Probab=52.80 E-value=1.1e+02 Score=23.99 Aligned_cols=85 Identities=20% Similarity=0.278 Sum_probs=43.3
Q ss_pred CCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHH
Q 019899 39 DHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRET 118 (334)
Q Consensus 39 ~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~ 118 (334)
++.|.|+++.|.-.+-..... ....+.+-+++.++ ..++..+.+.++..+..+.+. .++++.....+ +.
T Consensus 91 ~~~d~viiDtpp~~~~~~~~~-l~~aD~vliv~~~~---~~~~~~~~~~~~~l~~~~~~~-~vV~N~~~~~~------~~ 159 (179)
T cd03110 91 EGAELIIIDGPPGIGCPVIAS-LTGADAALLVTEPT---PSGLHDLERAVELVRHFGIPV-GVVINKYDLND------EI 159 (179)
T ss_pred cCCCEEEEECcCCCcHHHHHH-HHcCCEEEEEecCC---cccHHHHHHHHHHHHHcCCCE-EEEEeCCCCCc------ch
Confidence 567899999884433221111 23455666665433 235555555554443333333 24444332211 12
Q ss_pred HHHHHHHHHhcCcEEE
Q 019899 119 LYELLDFAREKNIHVI 134 (334)
Q Consensus 119 l~~i~~~~~~~~~~vi 134 (334)
.+++.+++++.|+.++
T Consensus 160 ~~~~~~~~~~~~~~vl 175 (179)
T cd03110 160 AEEIEDYCEEEGIPIL 175 (179)
T ss_pred HHHHHHHHHHcCCCeE
Confidence 4456667777888766
No 474
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=52.68 E-value=13 Score=31.99 Aligned_cols=26 Identities=35% Similarity=0.438 Sum_probs=23.8
Q ss_pred CHHHHHHHHHHHHhcCcEEEEecccc
Q 019899 115 PRETLYELLDFAREKNIHVISDEIYG 140 (334)
Q Consensus 115 ~~~~l~~i~~~~~~~~~~vi~D~~~~ 140 (334)
+.++++++++.|+++|+.||.|-+..
T Consensus 50 t~~d~~~Lv~~~h~~gi~VilD~V~N 75 (316)
T PF00128_consen 50 TMEDFKELVDAAHKRGIKVILDVVPN 75 (316)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEETS
T ss_pred hhhhhhhhhhccccccceEEEeeecc
Confidence 57889999999999999999999864
No 475
>PF08543 Phos_pyr_kin: Phosphomethylpyrimidine kinase; InterPro: IPR013749 This enzyme 2.7.4.7 from EC is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 2DDW_B 2DDO_B 2DDM_A 3IBQ_A 3H74_A 3HYO_A 1UB0_A 1VI9_D 1TD2_B 2PHP_D ....
Probab=52.39 E-value=60 Score=27.23 Aligned_cols=52 Identities=17% Similarity=0.303 Sum_probs=35.5
Q ss_pred ccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEecc
Q 019899 79 FSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEI 138 (334)
Q Consensus 79 ~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~ 138 (334)
++.+.+.+.++.... ..++++|. +|.+.+.+.++.+.++.+++++++++|=+
T Consensus 43 ~~~~~~~~ql~~~~~-~~~~~aik-------iG~l~~~~~v~~i~~~l~~~~~~vV~DPV 94 (246)
T PF08543_consen 43 VDSEMIKAQLDALLE-DMKFDAIK-------IGYLGSAEQVEIIADFLKKPKIPVVLDPV 94 (246)
T ss_dssp --HHHHHHHHHHHHH-TSC-SEEE-------E-S-SSHHHHHHHHHHHHHTTTEEEEE--
T ss_pred CCHHHHHHHHHHhcc-cccccEEE-------EcccCCchhhhhHHHHHhccCCCEEEecc
Confidence 466777777776543 33666554 68888999999999999889999999944
No 476
>PF04244 DPRP: Deoxyribodipyrimidine photo-lyase-related protein; InterPro: IPR007357 This family appears to be related to DNA photolyases.; PDB: 3ZXS_A.
Probab=52.28 E-value=79 Score=26.22 Aligned_cols=62 Identities=16% Similarity=0.183 Sum_probs=29.1
Q ss_pred ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEE
Q 019899 61 RTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVI 134 (334)
Q Consensus 61 ~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi 134 (334)
..|.+|.++..+++.+.+-=.+.|.+.++.. ++..|.++.|.. ..-.++|.++|.+.|+.+-
T Consensus 60 ~~G~~V~Y~~~~~~~~~~s~~~~L~~~~~~~-----~~~~~~~~~P~d-------~~l~~~l~~~~~~~~i~~~ 121 (224)
T PF04244_consen 60 AKGFRVHYIELDDPENTQSFEDALARALKQH-----GIDRLHVMEPGD-------YRLEQRLESLAQQLGIPLE 121 (224)
T ss_dssp HTT--EEEE-TT-TT--SSHHHHHHHHHHHH---------EEEE--S--------HHHHHHHHH----SSS-EE
T ss_pred hCCCEEEEEeCCCccccccHHHHHHHHHHHc-----CCCEEEEECCCC-------HHHHHHHHhhhcccCCceE
Confidence 4699999999865443322246677777765 667788887753 2236777888888877543
No 477
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=52.25 E-value=77 Score=27.15 Aligned_cols=58 Identities=17% Similarity=0.206 Sum_probs=37.2
Q ss_pred CCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc---CcEEE
Q 019899 74 TDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK---NIHVI 134 (334)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~vi 134 (334)
++++.+|.+.+++.++...+. +++.+++. .++--+..++.+|.+++++.+.+. ++.|+
T Consensus 10 ~~dg~iD~~~~~~~i~~l~~~--Gv~gi~~~-GstGE~~~ls~~Er~~l~~~~~~~~~~~~~vi 70 (281)
T cd00408 10 TADGEVDLDALRRLVEFLIEA--GVDGLVVL-GTTGEAPTLTDEERKEVIEAVVEAVAGRVPVI 70 (281)
T ss_pred CCCCCcCHHHHHHHHHHHHHc--CCCEEEEC-CCCcccccCCHHHHHHHHHHHHHHhCCCCeEE
Confidence 344578888888887766554 34544433 444456778888888888776553 45555
No 478
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=52.24 E-value=98 Score=26.73 Aligned_cols=58 Identities=16% Similarity=0.205 Sum_probs=39.1
Q ss_pred CCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc---CcEEE
Q 019899 74 TDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK---NIHVI 134 (334)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~vi 134 (334)
+++..+|.+.+++.++...+. +++.++++ .++--+..++.+|..++++.+.+. ++.|+
T Consensus 14 ~~dg~iD~~~l~~~i~~l~~~--Gv~gi~~~-Gs~GE~~~ls~~Er~~~~~~~~~~~~~~~~vi 74 (292)
T PRK03170 14 KEDGSVDFAALRKLVDYLIAN--GTDGLVVV-GTTGESPTLTHEEHEELIRAVVEAVNGRVPVI 74 (292)
T ss_pred CCCCCcCHHHHHHHHHHHHHc--CCCEEEEC-CcCCccccCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 455689999999888776554 45555543 444456778888888888876653 35554
No 479
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase. A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here.
Probab=51.72 E-value=50 Score=32.13 Aligned_cols=27 Identities=22% Similarity=0.292 Sum_probs=24.5
Q ss_pred CHHHHHHHHHHHHhcCcEEEEeccccc
Q 019899 115 PRETLYELLDFAREKNIHVISDEIYGG 141 (334)
Q Consensus 115 ~~~~l~~i~~~~~~~~~~vi~D~~~~~ 141 (334)
+.++++++++.|+++|+.||.|-++.-
T Consensus 204 t~~dlk~lV~~~H~~Gi~VilD~V~NH 230 (613)
T TIGR01515 204 TPDDFMYFVDACHQAGIGVILDWVPGH 230 (613)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecccC
Confidence 577999999999999999999998754
No 480
>PLN02522 ATP citrate (pro-S)-lyase
Probab=51.47 E-value=58 Score=31.47 Aligned_cols=74 Identities=19% Similarity=0.198 Sum_probs=43.7
Q ss_pred CCCCCChhhhhhhccC--cEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHH
Q 019899 48 SPYYPGFDRDIRFRTG--VELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDF 125 (334)
Q Consensus 48 ~p~~~~~~~~~~~~~g--~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~ 125 (334)
-|.|.+..++.+...+ ..++++|.. .-.+++.+++.. .+++.+++..-..| ..+.+++.++
T Consensus 63 iPVf~tv~eA~~~~~~~~~~vifvp~~------~a~da~lEa~~a-----~GIk~~VIiteGfp------e~d~~~l~~~ 125 (608)
T PLN02522 63 IPVHGSIEAACKAHPTADVFINFASFR------SAAASSMEALKQ-----PTIRVVAIIAEGVP------ESDTKQLIAY 125 (608)
T ss_pred ccccchHHHHHHhCCCCcEEEEeCChH------HhHHHHHHHHhh-----CCCCEEEEECCCCC------hhhHHHHHHH
Confidence 4666666666652213 334455521 123444444443 26777777655544 3347889999
Q ss_pred HHhcCcEEEEecc
Q 019899 126 AREKNIHVISDEI 138 (334)
Q Consensus 126 ~~~~~~~vi~D~~ 138 (334)
++++|+.||==++
T Consensus 126 Ar~~g~rlIGPNc 138 (608)
T PLN02522 126 ARANNKVVIGPAT 138 (608)
T ss_pred HHHcCCEEECCCC
Confidence 9999999994444
No 481
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=50.89 E-value=65 Score=20.73 Aligned_cols=33 Identities=21% Similarity=0.359 Sum_probs=23.6
Q ss_pred EEEEeCCCCCcccCCC-HHHHHHHHHHHHhcCcEEEEe
Q 019899 100 GILICNPANPVGNIIP-RETLYELLDFAREKNIHVISD 136 (334)
Q Consensus 100 ~i~~~~p~nptG~~~~-~~~l~~i~~~~~~~~~~vi~D 136 (334)
.+++.+|... ++ .+++++|.++.++-|-+||+|
T Consensus 37 tll~i~~~~~----~~~~~~~~~l~~~v~~G~~lvl~a 70 (70)
T PF14258_consen 37 TLLVIGPDLR----LSEPEEAEALLEWVEAGNTLVLAA 70 (70)
T ss_pred EEEEEeCCCC----CCchHHHHHHHHHHHcCCEEEEeC
Confidence 4566655422 44 488999999999888888765
No 482
>PRK09505 malS alpha-amylase; Reviewed
Probab=50.76 E-value=62 Score=31.88 Aligned_cols=59 Identities=19% Similarity=0.334 Sum_probs=40.9
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCC-CCCc-----------------cc-----------CCCHHHHHHHHHHHHhcC
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNP-ANPV-----------------GN-----------IIPRETLYELLDFAREKN 130 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p-~npt-----------------G~-----------~~~~~~l~~i~~~~~~~~ 130 (334)
|+..+.+.|.-.++- ++.+|+++.+ .++. |. .-+.++++++++.|+++|
T Consensus 228 dl~Gi~~kLdyl~~L--Gv~aIwlsPi~~~~~~~~~~g~~g~~~~~~yhgY~~~D~~~id~~~Gt~~dfk~Lv~~aH~~G 305 (683)
T PRK09505 228 DLRGLTEKLDYLQQL--GVNALWISSPLEQIHGWVGGGTKGDFPHYAYHGYYTLDWTKLDANMGTEADLRTLVDEAHQRG 305 (683)
T ss_pred CHHHHHHhhHHHHHc--CCCEEEeCccccccccccccccccCCCcCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHCC
Confidence 677777766544333 5677887755 2221 11 115679999999999999
Q ss_pred cEEEEecccc
Q 019899 131 IHVISDEIYG 140 (334)
Q Consensus 131 ~~vi~D~~~~ 140 (334)
|.||+|-+.-
T Consensus 306 i~VilD~V~N 315 (683)
T PRK09505 306 IRILFDVVMN 315 (683)
T ss_pred CEEEEEECcC
Confidence 9999998864
No 483
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=50.70 E-value=1.4e+02 Score=24.55 Aligned_cols=102 Identities=20% Similarity=0.310 Sum_probs=54.4
Q ss_pred EEEecCcHHHHHHHHHHhcCCCCeE--Eec-CC----CCC---C----hhhhhhhccCcEEEEEeCCCCCCccccHHHHH
Q 019899 20 IVLTAGATPAVEILCFCLADHGNAL--LVP-SP----YYP---G----FDRDIRFRTGVELIPVHCRSTDNFAFSITALD 85 (334)
Q Consensus 20 i~~~~g~~~~~~~~~~~l~~~gd~v--l~~-~p----~~~---~----~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~ 85 (334)
++..|||-....++..+.- .|..| ++. .+ .|. . ....++ ..|.+.+.+++.. ......+.+.
T Consensus 1 ~vl~SGGkDS~~al~~a~~-~G~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~A~-~lgip~~~i~~~~--~~~~~~~~l~ 76 (218)
T TIGR03679 1 AALYSGGKDSNYALYKALE-EGHEVRCLITVVPENEESYMFHTPNIELTRLQAE-ALGIPLVKIETSG--EKEKEVEDLK 76 (218)
T ss_pred CeeecCcHHHHHHHHHHHH-cCCEEEEEEEeccCCCCccccCCCCHHHHHHHHH-HhCCCEEEEECCC--CChHHHHHHH
Confidence 3567888777777765554 56544 222 11 111 1 112233 5677777777531 1112345566
Q ss_pred HHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEE
Q 019899 86 QAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVI 134 (334)
Q Consensus 86 ~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi 134 (334)
++++..+.. ++..|+ +|.+.+......+-++|.+.|+.++
T Consensus 77 ~~l~~~~~~--g~~~vv-------~G~i~sd~~~~~~e~v~~~~gl~~~ 116 (218)
T TIGR03679 77 GALKELKRE--GVEGIV-------TGAIASRYQKSRIERICEELGLKVF 116 (218)
T ss_pred HHHHHHHHc--CCCEEE-------ECCcccHhHHHHHHHHHHhCCCeEE
Confidence 666665443 344332 4555665556666678877777765
No 484
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=50.52 E-value=1.5e+02 Score=24.71 Aligned_cols=81 Identities=10% Similarity=0.121 Sum_probs=43.1
Q ss_pred CcEEEecCcHHHHHH-HHHHhcCCCCeEEecCCCCC-ChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcC
Q 019899 18 SQIVLTAGATPAVEI-LCFCLADHGNALLVPSPYYP-GFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRG 95 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~-~~~~l~~~gd~vl~~~p~~~-~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~ 95 (334)
+.+++.+|++.++-. +...|.+.|.+|++....-. ......+ ..+.++..+.++ --|.++++++++......
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~D-----l~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12481 8 GKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVE-ALGRKFHFITAD-----LIQQKDIDSIVSQAVEVM 81 (251)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHH-HcCCeEEEEEeC-----CCCHHHHHHHHHHHHHHc
Confidence 345566666666644 45556778888876532211 1111222 245555555542 235677777776655444
Q ss_pred CceeEEEEe
Q 019899 96 VKVRGILIC 104 (334)
Q Consensus 96 ~~~~~i~~~ 104 (334)
+++..++.+
T Consensus 82 g~iD~lv~~ 90 (251)
T PRK12481 82 GHIDILINN 90 (251)
T ss_pred CCCCEEEEC
Confidence 567755443
No 485
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=50.18 E-value=95 Score=22.42 Aligned_cols=53 Identities=13% Similarity=0.166 Sum_probs=34.4
Q ss_pred ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc
Q 019899 61 RTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK 129 (334)
Q Consensus 61 ~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~ 129 (334)
..|.+++.... ....+++.+.+.+. ++.+|.++.... ...+.+.++++.+++.
T Consensus 25 ~~G~~V~~lg~------~~~~~~l~~~~~~~-----~pdvV~iS~~~~-----~~~~~~~~~i~~l~~~ 77 (119)
T cd02067 25 DAGFEVIDLGV------DVPPEEIVEAAKEE-----DADAIGLSGLLT-----THMTLMKEVIEELKEA 77 (119)
T ss_pred HCCCEEEECCC------CCCHHHHHHHHHHc-----CCCEEEEecccc-----ccHHHHHHHHHHHHHc
Confidence 57888866542 35778888887764 788777764422 2234577777777665
No 486
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=50.17 E-value=1e+02 Score=23.25 Aligned_cols=58 Identities=12% Similarity=0.083 Sum_probs=39.9
Q ss_pred hhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCc
Q 019899 57 DIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNI 131 (334)
Q Consensus 57 ~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~ 131 (334)
.++ ..|.+|+.... ...++++.++..+. ++.+|.+++-.. -..+.++++.+.+++.|+
T Consensus 24 ~l~-~~GfeVi~LG~------~v~~e~~v~aa~~~-----~adiVglS~l~~-----~~~~~~~~~~~~l~~~gl 81 (134)
T TIGR01501 24 AFT-NAGFNVVNLGV------LSPQEEFIKAAIET-----KADAILVSSLYG-----HGEIDCKGLRQKCDEAGL 81 (134)
T ss_pred HHH-HCCCEEEECCC------CCCHHHHHHHHHHc-----CCCEEEEecccc-----cCHHHHHHHHHHHHHCCC
Confidence 344 68999988775 35778888877764 788777665542 223458888888888764
No 487
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=50.06 E-value=99 Score=22.61 Aligned_cols=59 Identities=20% Similarity=0.170 Sum_probs=37.5
Q ss_pred ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc---CcEEEE
Q 019899 61 RTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK---NIHVIS 135 (334)
Q Consensus 61 ~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~vi~ 135 (334)
..|.+++.... ....+++.+++.+. ++.+|.++...+ ...+.++++++.+++. ++.+++
T Consensus 25 ~~G~~vi~lG~------~vp~e~~~~~a~~~-----~~d~V~iS~~~~-----~~~~~~~~~~~~L~~~~~~~i~i~~ 86 (122)
T cd02071 25 DAGFEVIYTGL------RQTPEEIVEAAIQE-----DVDVIGLSSLSG-----GHMTLFPEVIELLRELGAGDILVVG 86 (122)
T ss_pred HCCCEEEECCC------CCCHHHHHHHHHHc-----CCCEEEEcccch-----hhHHHHHHHHHHHHhcCCCCCEEEE
Confidence 57888877663 25677777777664 788777765532 2344577777777666 444443
No 488
>PRK08176 pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase; Reviewed
Probab=49.95 E-value=1.4e+02 Score=25.70 Aligned_cols=54 Identities=9% Similarity=0.202 Sum_probs=36.2
Q ss_pred ccHHHHHHHHHHHHHcC--CceeEEEEeCCCCCcccCCCHHHHHHHHHHHHh-----cCcEEEEeccc
Q 019899 79 FSITALDQAFNQARKRG--VKVRGILICNPANPVGNIIPRETLYELLDFARE-----KNIHVISDEIY 139 (334)
Q Consensus 79 ~~~~~l~~~l~~~~~~~--~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~-----~~~~vi~D~~~ 139 (334)
++.+.+++.++.....+ .++++|. +|.+.+.+..+.+.+++++ .+.++++|-+.
T Consensus 68 ~~~~~i~~~l~~~~~~~~l~~~d~i~-------~G~l~s~~~~~~i~~~l~~~~~~~~~~~vv~DPvm 128 (281)
T PRK08176 68 IPDEWFSGYLRALQERDALRQLRAVT-------TGYMGSASQIKILAEWLTALRADHPDLLIMVDPVI 128 (281)
T ss_pred CCHHHHHHHHHHHHhcCccccCCEEE-------ECCCCCHHHHHHHHHHHHHHHHHCCCCcEEeCCcc
Confidence 34577777777554332 1455443 5777788888888888876 37788888654
No 489
>KOG0622 consensus Ornithine decarboxylase [Amino acid transport and metabolism]
Probab=49.93 E-value=2e+02 Score=26.29 Aligned_cols=81 Identities=14% Similarity=0.204 Sum_probs=52.8
Q ss_pred CCCeEEecCCCCCC-hhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccC-----
Q 019899 40 HGNALLVPSPYYPG-FDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNI----- 113 (334)
Q Consensus 40 ~gd~vl~~~p~~~~-~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~----- 113 (334)
+.+++++-+||-.. ...-+. ..|..+-+++ +-++|.+..+. .++.++++-+.+..+++++
T Consensus 122 ~P~riIyanpcK~~s~IkyAa-~~gV~~~tfD---------ne~el~kv~~~----hP~a~llLrIatdds~a~~~l~~K 187 (448)
T KOG0622|consen 122 SPERIIYANPCKQVSQIKYAA-KHGVSVMTFD---------NEEELEKVAKS----HPNANLLLRIATDDSTATCRLNLK 187 (448)
T ss_pred ChHHeEecCCCccHHHHHHHH-HcCCeEEeec---------CHHHHHHHHHh----CCCceEEEEEccCCCcccccccCc
Confidence 44789999998763 223333 5677776655 23555554443 4667777777664443333
Q ss_pred --CCHHHHHHHHHHHHhcCcEEE
Q 019899 114 --IPRETLYELLDFAREKNIHVI 134 (334)
Q Consensus 114 --~~~~~l~~i~~~~~~~~~~vi 134 (334)
.+.++++.+.+.++++++-|+
T Consensus 188 FG~~~~~~~~lLd~ak~l~lnvv 210 (448)
T KOG0622|consen 188 FGCSLDNCRHLLDMAKELELNVV 210 (448)
T ss_pred cCCCHHHHHHHHHHHHHcCceEE
Confidence 366789999999999977766
No 490
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=49.80 E-value=42 Score=27.93 Aligned_cols=59 Identities=22% Similarity=0.236 Sum_probs=35.6
Q ss_pred ccCcEEEEE-eCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEE
Q 019899 61 RTGVELIPV-HCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVIS 135 (334)
Q Consensus 61 ~~g~~v~~v-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~ 135 (334)
..|.++..+ +. ..|.+...+.++...++ ++.+|++..+.... ...+++-|.+.|++|+.
T Consensus 26 ~~g~~~~~~~~~------~~d~~~q~~~i~~~i~~--~~d~Iiv~~~~~~~--------~~~~l~~~~~~gIpvv~ 85 (257)
T PF13407_consen 26 ELGYEVEIVFDA------QNDPEEQIEQIEQAISQ--GVDGIIVSPVDPDS--------LAPFLEKAKAAGIPVVT 85 (257)
T ss_dssp HHTCEEEEEEES------TTTHHHHHHHHHHHHHT--TESEEEEESSSTTT--------THHHHHHHHHTTSEEEE
T ss_pred HcCCEEEEeCCC------CCCHHHHHHHHHHHHHh--cCCEEEecCCCHHH--------HHHHHHHHhhcCceEEE
Confidence 468888775 43 22444444555444333 68877766443221 45666668889999985
No 491
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=49.79 E-value=99 Score=29.18 Aligned_cols=66 Identities=18% Similarity=0.120 Sum_probs=41.7
Q ss_pred ccC-cEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc--CcEEEEec
Q 019899 61 RTG-VELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK--NIHVISDE 137 (334)
Q Consensus 61 ~~g-~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~--~~~vi~D~ 137 (334)
..| .+|..++. ....++.+++.+.+.+. ++.+|.++.. | .......++++.+++. ++.||+=+
T Consensus 34 ~~G~~~V~iiD~---~~~~~~~~~~~~~l~~~-----~pdvVgis~~---t---~~~~~a~~~~~~~k~~~P~~~iV~GG 99 (497)
T TIGR02026 34 DAGYHDVTFLDA---MTGPLTDEKLVERLRAH-----CPDLVLITAI---T---PAIYIACETLKFARERLPNAIIVLGG 99 (497)
T ss_pred hcCCcceEEecc---cccCCCHHHHHHHHHhc-----CcCEEEEecC---c---ccHHHHHHHHHHHHHHCCCCEEEEcC
Confidence 467 57777764 33356777888877764 7887766532 1 2334466777777665 88888766
Q ss_pred ccc
Q 019899 138 IYG 140 (334)
Q Consensus 138 ~~~ 140 (334)
.|.
T Consensus 100 ~h~ 102 (497)
T TIGR02026 100 IHP 102 (497)
T ss_pred CCc
Confidence 654
No 492
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=49.55 E-value=76 Score=25.57 Aligned_cols=52 Identities=19% Similarity=0.118 Sum_probs=32.8
Q ss_pred HHHHHHHHHHH-HcCCceeE-EEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEe
Q 019899 82 TALDQAFNQAR-KRGVKVRG-ILICNPANPVGNIIPRETLYELLDFAREKNIHVISD 136 (334)
Q Consensus 82 ~~l~~~l~~~~-~~~~~~~~-i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D 136 (334)
+.+..+++..+ ....+.++ |+++..+|..|.+-| .+.-.++++++|+.++.=
T Consensus 95 dAi~~av~rl~~~~~a~~kvvILLTDG~n~~~~i~P---~~aAa~lA~~~gV~iytI 148 (191)
T cd01455 95 EATEFAIKELAAKEDFDEAIVIVLSDANLERYGIQP---KKLADALAREPNVNAFVI 148 (191)
T ss_pred HHHHHHHHHHHhcCcCCCcEEEEEeCCCcCCCCCCh---HHHHHHHHHhCCCEEEEE
Confidence 78888887765 43333444 555555767777666 444456677888877643
No 493
>PRK05402 glycogen branching enzyme; Provisional
Probab=49.53 E-value=53 Score=32.67 Aligned_cols=30 Identities=17% Similarity=0.108 Sum_probs=25.8
Q ss_pred CCCHHHHHHHHHHHHhcCcEEEEecccccc
Q 019899 113 IIPRETLYELLDFAREKNIHVISDEIYGGS 142 (334)
Q Consensus 113 ~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~ 142 (334)
.-+.++++++++.|+++||.||.|-++.-+
T Consensus 311 ~Gt~~dfk~lV~~~H~~Gi~VilD~V~NH~ 340 (726)
T PRK05402 311 FGTPDDFRYFVDACHQAGIGVILDWVPAHF 340 (726)
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 337789999999999999999999987543
No 494
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=49.48 E-value=1.7e+02 Score=25.09 Aligned_cols=60 Identities=10% Similarity=0.045 Sum_probs=37.7
Q ss_pred CCCCeEEecCCCCCCh-hhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCC
Q 019899 39 DHGNALLVPSPYYPGF-DRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNP 106 (334)
Q Consensus 39 ~~gd~vl~~~p~~~~~-~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p 106 (334)
+.|..|.+-.-..... .+.++ ..|.++..++- +.++.-|.+++.+.+++. ++.++++.+.
T Consensus 29 ~~g~~v~f~~~~~~~~~~~~i~-~~g~~v~~~~~--~~~~~~d~~~~~~~l~~~-----~~d~vV~D~y 89 (279)
T TIGR03590 29 AQGAEVAFACKPLPGDLIDLLL-SAGFPVYELPD--ESSRYDDALELINLLEEE-----KFDILIVDHY 89 (279)
T ss_pred HCCCEEEEEeCCCCHHHHHHHH-HcCCeEEEecC--CCchhhhHHHHHHHHHhc-----CCCEEEEcCC
Confidence 4555554443333333 45566 78888888763 233445777888888874 7787887766
No 495
>PRK13602 putative ribosomal protein L7Ae-like; Provisional
Probab=49.29 E-value=81 Score=21.35 Aligned_cols=45 Identities=16% Similarity=0.194 Sum_probs=32.2
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEe
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISD 136 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D 136 (334)
-.++..++|++ ++.+++++..-.. ..-.+.+.++|++++++++.-
T Consensus 15 G~~~v~kai~~-----gkaklViiA~D~~-------~~~~~~i~~~c~~~~Vp~~~~ 59 (82)
T PRK13602 15 GTKQTVKALKR-----GSVKEVVVAEDAD-------PRLTEKVEALANEKGVPVSKV 59 (82)
T ss_pred cHHHHHHHHHc-----CCeeEEEEECCCC-------HHHHHHHHHHHHHcCCCEEEE
Confidence 34667777776 3778777764432 334889999999999999744
No 496
>PRK05854 short chain dehydrogenase; Provisional
Probab=49.18 E-value=1.2e+02 Score=26.51 Aligned_cols=81 Identities=14% Similarity=0.127 Sum_probs=42.5
Q ss_pred CcEEEecCcHHHHHHH-HHHhcCCCCeEEecCCCCCChhhhhhh---c-cCcEEEEEeCCCCCCccccHHHHHHHHHHHH
Q 019899 18 SQIVLTAGATPAVEIL-CFCLADHGNALLVPSPYYPGFDRDIRF---R-TGVELIPVHCRSTDNFAFSITALDQAFNQAR 92 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~-~~~l~~~gd~vl~~~p~~~~~~~~~~~---~-~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~ 92 (334)
+.+++.+|++.++-.. ...|.+.|.+|++..-.-......... . .+.++..+.++ --|.+.++++.+...
T Consensus 14 gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~D-----l~d~~sv~~~~~~~~ 88 (313)
T PRK05854 14 GKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALD-----LSSLASVAALGEQLR 88 (313)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEec-----CCCHHHHHHHHHHHH
Confidence 3466666766777444 445667787777654322222222210 1 13345444442 135677777776655
Q ss_pred HcCCceeEEEE
Q 019899 93 KRGVKVRGILI 103 (334)
Q Consensus 93 ~~~~~~~~i~~ 103 (334)
...+++..++.
T Consensus 89 ~~~~~iD~li~ 99 (313)
T PRK05854 89 AEGRPIHLLIN 99 (313)
T ss_pred HhCCCccEEEE
Confidence 54456775443
No 497
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=49.00 E-value=1.3e+02 Score=26.25 Aligned_cols=59 Identities=10% Similarity=0.068 Sum_probs=41.0
Q ss_pred CCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc---CcEEEE
Q 019899 74 TDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK---NIHVIS 135 (334)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~vi~ 135 (334)
+++..+|.+.+++.++...+. +++.+++. .++--+..++.+|..++++.+.+. +++||+
T Consensus 20 ~~dg~iD~~~l~~li~~l~~~--Gv~Gi~~~-GstGE~~~Lt~eEr~~~~~~~~~~~~~~~pvi~ 81 (303)
T PRK03620 20 DADGSFDEAAYREHLEWLAPY--GAAALFAA-GGTGEFFSLTPDEYSQVVRAAVETTAGRVPVIA 81 (303)
T ss_pred CCCCCcCHHHHHHHHHHHHHc--CCCEEEEC-cCCcCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 345689999999998876554 45555543 344445678999999998877553 466664
No 498
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=48.99 E-value=1.3e+02 Score=26.08 Aligned_cols=60 Identities=17% Similarity=0.293 Sum_probs=39.8
Q ss_pred CCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc---CcEEEE
Q 019899 74 TDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK---NIHVIS 135 (334)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~vi~ 135 (334)
+++..+|.+.+++.++...+.| .+..+++ +.++--+..++.+|.+++++.+.+. +++|++
T Consensus 13 ~~dg~iD~~~~~~~i~~~i~~G-~v~gi~~-~GstGE~~~Lt~eEr~~~~~~~~~~~~~~~pvi~ 75 (290)
T TIGR00683 13 NEDGTINEKGLRQIIRHNIDKM-KVDGLYV-GGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIA 75 (290)
T ss_pred CCCCCcCHHHHHHHHHHHHhCC-CcCEEEE-CCcccccccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 3445899999999888765543 1554443 3444456678999999998877654 455553
No 499
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=48.74 E-value=89 Score=26.40 Aligned_cols=62 Identities=15% Similarity=0.266 Sum_probs=36.3
Q ss_pred CCccccHHHHHHHHHHHHHcCCceeEEEEeC-C--CC--CcccCCCHHHHHHHHHHHHhcCcEEEEeccccc
Q 019899 75 DNFAFSITALDQAFNQARKRGVKVRGILICN-P--AN--PVGNIIPRETLYELLDFAREKNIHVISDEIYGG 141 (334)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~-p--~n--ptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~ 141 (334)
.+...++++++.+++...+.| +.+ +++++ . .+ ++-...+ ++.|..+.+..+++|++|-.|+.
T Consensus 129 ~G~~~t~~e~~~A~e~i~~~G-n~~-i~L~eRg~~~Y~~~~~n~~d---l~ai~~lk~~~~lPVivd~SHs~ 195 (250)
T PRK13397 129 RGLMATIEEYLGALSYLQDTG-KSN-IILCERGVRGYDVETRNMLD---IMAVPIIQQKTDLPIIVDVSHST 195 (250)
T ss_pred CCCCCCHHHHHHHHHHHHHcC-CCe-EEEEccccCCCCCccccccC---HHHHHHHHHHhCCCeEECCCCCC
Confidence 344567788887777665554 344 44443 3 22 2222444 66666666667888888877653
No 500
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=48.37 E-value=1.9e+02 Score=25.43 Aligned_cols=60 Identities=17% Similarity=0.250 Sum_probs=39.3
Q ss_pred cccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcC-cEEEEeccc
Q 019899 78 AFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKN-IHVISDEIY 139 (334)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~-~~vi~D~~~ 139 (334)
.++.+.+++.++..... ++.++|++. -++|.|.....+++.+.++-.++.+ +++++++..
T Consensus 79 ~~~~~~~~~~l~~~~~~-~~vk~vvL~-inSPGG~v~as~~i~~~l~~l~~~~PV~v~v~~~A 139 (317)
T COG0616 79 FIGGDDIEEILRAARAD-PSVKAVVLR-INSPGGSVVASELIARALKRLRAKKPVVVSVGGYA 139 (317)
T ss_pred cccHHHHHHHHHHHhcC-CCCceEEEE-EECcCCchhHHHHHHHHHHHHhhcCCEEEEECCee
Confidence 45677888877765432 245554443 4678999998888766666555554 777777653
Done!