Query 019899
Match_columns 334
No_of_seqs 112 out of 1774
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 08:45:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019899.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019899hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3piu_A 1-aminocyclopropane-1-c 100.0 2.6E-47 9E-52 348.3 36.2 332 2-333 96-432 (435)
2 1iay_A ACC synthase 2, 1-amino 100.0 2.9E-46 1E-50 340.7 38.4 333 2-334 93-428 (428)
3 1b5p_A Protein (aspartate amin 100.0 1.3E-45 4.3E-50 331.9 27.3 305 2-332 78-384 (385)
4 3tcm_A Alanine aminotransferas 100.0 1.4E-44 4.8E-49 335.0 32.9 328 1-332 143-493 (500)
5 1gd9_A Aspartate aminotransfer 100.0 3.1E-44 1E-48 323.3 30.5 312 2-334 73-387 (389)
6 3aow_A Putative uncharacterize 100.0 5.5E-44 1.9E-48 327.0 32.5 309 2-332 128-444 (448)
7 2o1b_A Aminotransferase, class 100.0 1.5E-44 5E-49 327.0 28.3 307 2-334 95-404 (404)
8 2x5d_A Probable aminotransfera 100.0 2.5E-44 8.6E-49 326.3 26.9 311 2-333 85-398 (412)
9 2r2n_A Kynurenine/alpha-aminoa 100.0 1.2E-43 4.2E-48 323.0 30.1 313 2-333 88-424 (425)
10 3kax_A Aminotransferase, class 100.0 6.3E-44 2.1E-48 320.5 27.8 308 2-330 69-382 (383)
11 3ihj_A Alanine aminotransferas 100.0 4E-43 1.4E-47 324.8 33.4 328 2-333 139-493 (498)
12 3dzz_A Putative pyridoxal 5'-p 100.0 5.9E-44 2E-48 321.6 27.2 313 2-334 72-390 (391)
13 3fdb_A Beta C-S lyase, putativ 100.0 6E-44 2.1E-48 320.0 26.3 304 2-333 68-376 (377)
14 3b46_A Aminotransferase BNA3; 100.0 3.4E-44 1.2E-48 328.7 24.7 311 2-328 105-442 (447)
15 3dyd_A Tyrosine aminotransfera 100.0 5.7E-44 2E-48 325.4 25.6 304 13-334 114-425 (427)
16 3nra_A Aspartate aminotransfer 100.0 2E-43 7E-48 319.7 29.0 311 2-334 88-406 (407)
17 3jtx_A Aminotransferase; NP_28 100.0 3.7E-43 1.3E-47 317.0 29.8 305 2-330 76-395 (396)
18 1yiz_A Kynurenine aminotransfe 100.0 1.1E-43 3.8E-48 323.8 25.8 315 2-332 87-428 (429)
19 1u08_A Hypothetical aminotrans 100.0 1.5E-43 5E-48 318.6 26.2 304 2-328 77-385 (386)
20 1c7n_A Cystalysin; transferase 100.0 2.1E-43 7.1E-48 319.0 27.2 312 2-333 76-393 (399)
21 3fvs_A Kynurenine--oxoglutarat 100.0 4.1E-44 1.4E-48 325.9 22.1 317 1-332 76-421 (422)
22 3l8a_A METC, putative aminotra 100.0 2.2E-43 7.5E-48 321.0 25.4 310 2-331 106-420 (421)
23 2dou_A Probable N-succinyldiam 100.0 4.5E-43 1.5E-47 314.4 27.0 300 2-330 73-375 (376)
24 3h14_A Aminotransferase, class 100.0 7.7E-43 2.6E-47 314.4 28.6 301 2-333 78-382 (391)
25 2o0r_A RV0858C (N-succinyldiam 100.0 1.6E-43 5.6E-48 320.9 24.3 310 2-333 72-396 (411)
26 1j32_A Aspartate aminotransfer 100.0 5.7E-43 1.9E-47 314.9 27.2 308 2-333 77-387 (388)
27 3e2y_A Kynurenine-oxoglutarate 100.0 2.1E-43 7E-48 320.1 24.1 312 2-328 71-408 (410)
28 1o4s_A Aspartate aminotransfer 100.0 1E-42 3.5E-47 313.4 28.4 299 2-332 88-388 (389)
29 3ele_A Amino transferase; RER0 100.0 1E-42 3.6E-47 314.3 28.5 298 1-334 85-397 (398)
30 4dq6_A Putative pyridoxal phos 100.0 6.8E-43 2.3E-47 314.6 26.6 307 2-330 77-390 (391)
31 1d2f_A MALY protein; aminotran 100.0 8.1E-43 2.8E-47 314.2 26.8 310 2-334 74-390 (390)
32 1vp4_A Aminotransferase, putat 100.0 1.6E-42 5.3E-47 315.8 28.5 310 2-332 95-417 (425)
33 3ezs_A Aminotransferase ASPB; 100.0 1.3E-42 4.3E-47 311.4 27.4 301 2-334 69-376 (376)
34 1xi9_A Putative transaminase; 100.0 6E-43 2.1E-47 316.7 24.9 307 2-333 88-403 (406)
35 1bw0_A TAT, protein (tyrosine 100.0 8.1E-43 2.8E-47 316.8 24.7 304 13-334 100-414 (416)
36 2x5f_A Aspartate_tyrosine_phen 100.0 8.1E-42 2.8E-46 311.5 30.5 307 2-334 98-430 (430)
37 2zc0_A Alanine glyoxylate tran 100.0 1.4E-41 4.7E-46 307.8 31.3 312 2-333 85-404 (407)
38 3ly1_A Putative histidinol-pho 100.0 1.5E-41 5.3E-46 301.9 30.6 296 5-333 56-352 (354)
39 2zyj_A Alpha-aminodipate amino 100.0 4.2E-42 1.4E-46 310.2 26.8 302 6-332 80-392 (397)
40 3op7_A Aminotransferase class 100.0 5.3E-42 1.8E-46 307.2 27.1 300 5-333 68-371 (375)
41 3k7y_A Aspartate aminotransfer 100.0 6.1E-42 2.1E-46 308.2 27.2 297 2-332 82-404 (405)
42 3get_A Histidinol-phosphate am 100.0 4.9E-42 1.7E-46 306.4 25.5 293 5-330 70-364 (365)
43 2z61_A Probable aspartate amin 100.0 9.9E-42 3.4E-46 305.0 26.9 292 2-331 76-369 (370)
44 3g0t_A Putative aminotransfera 100.0 3.3E-42 1.1E-46 314.8 23.4 309 2-332 92-436 (437)
45 2gb3_A Aspartate aminotransfer 100.0 1.3E-41 4.5E-46 308.1 26.7 304 2-333 89-402 (409)
46 1v2d_A Glutamine aminotransfer 100.0 3.5E-42 1.2E-46 309.1 22.2 301 5-333 66-371 (381)
47 3qgu_A LL-diaminopimelate amin 100.0 4.6E-42 1.6E-46 314.9 22.3 292 13-332 128-439 (449)
48 3euc_A Histidinol-phosphate am 100.0 1.3E-40 4.4E-45 297.4 29.7 288 8-331 75-366 (367)
49 3rq1_A Aminotransferase class 100.0 2.3E-40 8E-45 300.8 30.7 291 19-333 104-415 (418)
50 3ffh_A Histidinol-phosphate am 100.0 9.2E-41 3.1E-45 297.9 26.9 291 5-330 72-363 (363)
51 1fg7_A Histidinol phosphate am 100.0 8.6E-41 2.9E-45 297.3 26.1 289 5-329 63-354 (356)
52 3ppl_A Aspartate aminotransfer 100.0 7.5E-41 2.6E-45 304.9 25.9 308 5-332 83-419 (427)
53 3d6k_A Putative aminotransfera 100.0 2.3E-40 7.8E-45 301.2 25.6 308 5-332 81-417 (422)
54 3t18_A Aminotransferase class 100.0 8E-40 2.8E-44 296.8 29.0 291 16-333 100-410 (413)
55 1lc5_A COBD, L-threonine-O-3-p 100.0 4.9E-40 1.7E-44 293.3 26.9 295 5-333 64-360 (364)
56 4f4e_A Aromatic-amino-acid ami 100.0 2.5E-40 8.4E-45 300.8 24.5 286 16-330 114-419 (420)
57 3f6t_A Aspartate aminotransfer 100.0 9.8E-41 3.4E-45 311.1 22.3 299 17-333 164-525 (533)
58 7aat_A Aspartate aminotransfer 100.0 3.1E-40 1.1E-44 298.4 24.8 298 2-330 81-400 (401)
59 3ei9_A LL-diaminopimelate amin 100.0 1.6E-40 5.4E-45 303.2 22.7 291 13-332 115-427 (432)
60 2zy4_A L-aspartate beta-decarb 100.0 3.6E-40 1.2E-44 307.4 24.0 298 16-333 164-522 (546)
61 3ftb_A Histidinol-phosphate am 100.0 5E-39 1.7E-43 286.4 29.3 293 5-332 66-360 (361)
62 3ez1_A Aminotransferase MOCR f 100.0 1.5E-39 5.2E-44 295.9 26.4 309 5-332 75-414 (423)
63 3fsl_A Aromatic-amino-acid ami 100.0 8.1E-40 2.8E-44 295.2 24.3 285 16-329 92-396 (397)
64 3b1d_A Betac-S lyase; HET: PLP 100.0 1.8E-43 6.2E-48 318.7 0.0 311 2-332 76-392 (392)
65 3asa_A LL-diaminopimelate amin 100.0 2.3E-40 8E-45 299.1 19.6 289 15-333 93-393 (400)
66 3cq5_A Histidinol-phosphate am 100.0 3.5E-38 1.2E-42 281.9 30.7 288 2-332 79-367 (369)
67 4eu1_A Mitochondrial aspartate 100.0 3.9E-39 1.3E-43 291.9 23.8 285 17-330 102-408 (409)
68 3if2_A Aminotransferase; YP_26 100.0 6.8E-39 2.3E-43 293.4 25.3 311 1-333 92-440 (444)
69 1yaa_A Aspartate aminotransfer 100.0 8.9E-39 3E-43 289.9 25.0 290 15-333 94-411 (412)
70 1ajs_A Aspartate aminotransfer 100.0 9.4E-39 3.2E-43 289.7 25.1 290 16-334 96-412 (412)
71 3g7q_A Valine-pyruvate aminotr 100.0 3.1E-39 1.1E-43 293.3 20.7 306 1-333 84-413 (417)
72 3meb_A Aspartate aminotransfer 100.0 2.9E-38 1E-42 289.2 27.1 290 17-333 117-444 (448)
73 3p1t_A Putative histidinol-pho 100.0 4.3E-38 1.5E-42 277.7 26.0 280 5-331 56-335 (337)
74 2q7w_A Aspartate aminotransfer 100.0 1.6E-38 5.3E-43 286.7 22.2 287 15-330 90-396 (396)
75 3hdo_A Histidinol-phosphate am 100.0 7E-38 2.4E-42 279.0 26.1 285 6-333 71-355 (360)
76 3fkd_A L-threonine-O-3-phospha 100.0 2.4E-38 8.1E-43 280.9 21.8 286 5-333 55-342 (350)
77 2ay1_A Aroat, aromatic amino a 100.0 1.8E-37 6.3E-42 279.6 22.9 285 16-329 88-392 (394)
78 3bwn_A AT1G70560, L-tryptophan 100.0 2.2E-37 7.6E-42 278.5 14.8 282 2-333 78-387 (391)
79 1uu1_A Histidinol-phosphate am 100.0 2E-36 6.7E-41 267.0 20.1 261 15-329 74-334 (335)
80 2dr1_A PH1308 protein, 386AA l 100.0 4.2E-35 1.5E-39 263.2 25.2 292 2-333 59-379 (386)
81 1vjo_A Alanine--glyoxylate ami 100.0 2.3E-35 8E-40 265.7 23.3 289 3-330 74-392 (393)
82 2hox_A ALLIIN lyase 1; cystein 100.0 4.8E-37 1.7E-41 279.1 12.3 283 2-333 110-425 (427)
83 3a2b_A Serine palmitoyltransfe 100.0 1.9E-34 6.6E-39 260.2 28.7 282 18-333 104-392 (398)
84 4h51_A Aspartate aminotransfer 100.0 2.1E-35 7.2E-40 265.7 21.8 284 20-333 112-417 (420)
85 3nnk_A Ureidoglycine-glyoxylat 100.0 9E-34 3.1E-38 256.7 25.6 285 13-333 59-390 (411)
86 3tqx_A 2-amino-3-ketobutyrate 100.0 2.6E-33 8.9E-38 252.7 28.4 286 19-333 105-396 (399)
87 3zrp_A Serine-pyruvate aminotr 100.0 1.1E-33 3.8E-38 253.7 25.7 283 12-333 47-363 (384)
88 2ch1_A 3-hydroxykynurenine tra 100.0 9.3E-34 3.2E-38 255.4 24.4 294 5-333 56-383 (396)
89 1eg5_A Aminotransferase; PLP-d 100.0 1.9E-34 6.4E-39 258.7 19.1 291 5-333 49-376 (384)
90 1fc4_A 2-amino-3-ketobutyrate 100.0 3.6E-33 1.2E-37 252.1 26.6 293 6-333 96-397 (401)
91 3isl_A Purine catabolism prote 100.0 6E-33 2.1E-37 251.7 28.0 292 6-333 50-390 (416)
92 2huf_A Alanine glyoxylate amin 100.0 4E-33 1.4E-37 251.0 25.7 289 9-333 61-383 (393)
93 3kgw_A Alanine-glyoxylate amin 100.0 3.2E-33 1.1E-37 251.5 25.0 292 3-333 63-388 (393)
94 1kmj_A Selenocysteine lyase; p 100.0 3.9E-33 1.3E-37 252.0 25.5 292 5-334 72-406 (406)
95 2z9v_A Aspartate aminotransfer 100.0 7.6E-33 2.6E-37 249.1 27.0 293 5-333 47-371 (392)
96 1t3i_A Probable cysteine desul 100.0 7.9E-33 2.7E-37 251.1 26.1 291 5-333 77-413 (420)
97 3f9t_A TDC, L-tyrosine decarbo 100.0 3.9E-33 1.3E-37 251.1 22.3 293 7-331 76-396 (397)
98 1iug_A Putative aspartate amin 100.0 2.6E-33 8.8E-38 248.5 19.1 287 6-333 40-348 (352)
99 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 5.1E-34 1.7E-38 254.9 14.5 287 9-333 63-370 (371)
100 1elu_A L-cysteine/L-cystine C- 100.0 1.8E-33 6.1E-38 252.9 17.7 287 5-329 64-388 (390)
101 1bs0_A Protein (8-amino-7-oxon 100.0 2.2E-32 7.4E-37 245.6 24.5 276 19-329 101-383 (384)
102 2yrr_A Aminotransferase, class 100.0 2.1E-32 7.1E-37 242.5 23.6 289 3-332 40-352 (353)
103 1m32_A 2-aminoethylphosphonate 100.0 3.1E-32 1.1E-36 242.6 24.2 282 17-333 56-365 (366)
104 4eb5_A Probable cysteine desul 100.0 8.7E-33 3E-37 247.8 20.6 290 7-333 50-373 (382)
105 4hvk_A Probable cysteine desul 100.0 6.8E-33 2.3E-37 248.2 19.5 289 5-333 48-373 (382)
106 2bwn_A 5-aminolevulinate synth 100.0 2.3E-32 7.8E-37 246.8 22.7 297 5-333 96-400 (401)
107 1e5e_A MGL, methionine gamma-l 100.0 7.8E-32 2.7E-36 243.2 25.0 274 5-332 67-394 (404)
108 3cai_A Possible aminotransfera 100.0 3E-32 1E-36 246.4 22.1 288 6-328 75-404 (406)
109 2w8t_A SPT, serine palmitoyltr 100.0 5.5E-32 1.9E-36 246.3 23.9 284 18-333 125-415 (427)
110 2bkw_A Alanine-glyoxylate amin 100.0 1.2E-31 4.1E-36 240.6 25.0 292 3-333 45-384 (385)
111 3kki_A CAI-1 autoinducer synth 100.0 8.3E-32 2.8E-36 243.8 23.8 276 19-333 121-404 (409)
112 3f0h_A Aminotransferase; RER07 100.0 6.3E-32 2.1E-36 241.8 22.1 289 3-332 59-373 (376)
113 3lvm_A Cysteine desulfurase; s 100.0 2.1E-32 7.3E-37 248.7 15.9 289 6-333 74-399 (423)
114 2dkj_A Serine hydroxymethyltra 100.0 1.3E-31 4.4E-36 242.3 20.7 287 13-332 82-387 (407)
115 1svv_A Threonine aldolase; str 100.0 2E-31 6.8E-36 236.9 20.6 294 2-332 55-357 (359)
116 3ffr_A Phosphoserine aminotran 100.0 7.4E-31 2.5E-35 233.4 18.8 270 16-330 60-361 (362)
117 3vax_A Putative uncharacterize 100.0 1.2E-31 4.2E-36 241.9 13.4 290 5-332 68-399 (400)
118 1v72_A Aldolase; PLP-dependent 100.0 1.1E-30 3.6E-35 232.0 19.2 291 2-333 49-353 (356)
119 1sff_A 4-aminobutyrate aminotr 100.0 2.5E-30 8.4E-35 235.3 20.7 291 17-333 102-424 (426)
120 2ez2_A Beta-tyrosinase, tyrosi 100.0 1.9E-29 6.4E-34 231.6 26.4 296 17-332 90-430 (456)
121 2aeu_A Hypothetical protein MJ 100.0 5.6E-30 1.9E-34 228.8 22.0 278 17-333 76-371 (374)
122 2eh6_A Acoat, acetylornithine 100.0 1.3E-30 4.4E-35 233.2 17.7 278 5-330 75-375 (375)
123 2ord_A Acoat, acetylornithine 100.0 7.6E-31 2.6E-35 236.6 15.7 282 5-332 87-396 (397)
124 3mad_A Sphingosine-1-phosphate 100.0 5.1E-30 1.8E-34 238.6 21.6 294 3-333 146-469 (514)
125 3i4j_A Aminotransferase, class 100.0 6.9E-30 2.3E-34 232.7 21.5 304 13-333 85-428 (430)
126 3ruy_A Ornithine aminotransfer 100.0 2E-30 6.8E-35 233.4 17.4 269 17-330 93-391 (392)
127 2rfv_A Methionine gamma-lyase; 100.0 3.8E-29 1.3E-33 225.5 24.7 266 19-328 81-395 (398)
128 1vef_A Acetylornithine/acetyl- 100.0 6.5E-30 2.2E-34 230.3 18.0 282 5-330 92-394 (395)
129 4adb_A Succinylornithine trans 100.0 2.1E-29 7.1E-34 227.8 20.9 276 17-333 96-400 (406)
130 3mc6_A Sphingosine-1-phosphate 100.0 7E-30 2.4E-34 236.8 18.1 297 3-333 114-437 (497)
131 1ibj_A CBL, cystathionine beta 100.0 9E-29 3.1E-33 226.2 24.7 281 2-332 139-461 (464)
132 1jg8_A L-ALLO-threonine aldola 100.0 1.3E-29 4.3E-34 224.4 18.0 280 18-333 54-346 (347)
133 3n5m_A Adenosylmethionine-8-am 100.0 5.8E-29 2E-33 228.0 22.4 305 2-332 97-451 (452)
134 3n0l_A Serine hydroxymethyltra 100.0 9.2E-29 3.2E-33 224.2 23.3 290 9-332 80-388 (417)
135 1zod_A DGD, 2,2-dialkylglycine 100.0 3.3E-29 1.1E-33 228.4 20.2 303 8-333 93-432 (433)
136 1s0a_A Adenosylmethionine-8-am 100.0 5.6E-29 1.9E-33 226.6 21.7 292 7-333 93-424 (429)
137 1qz9_A Kynureninase; kynurenin 100.0 4.2E-29 1.4E-33 226.4 19.7 278 5-332 76-401 (416)
138 2pb2_A Acetylornithine/succiny 100.0 5.2E-29 1.8E-33 226.1 19.8 274 17-332 114-417 (420)
139 3a9z_A Selenocysteine lyase; P 100.0 4.1E-29 1.4E-33 227.7 18.7 291 5-333 66-428 (432)
140 3ndn_A O-succinylhomoserine su 100.0 2E-28 6.8E-33 221.1 22.7 272 17-330 96-413 (414)
141 2c0r_A PSAT, phosphoserine ami 100.0 2.8E-30 9.6E-35 230.0 10.5 282 5-334 54-362 (362)
142 3qhx_A Cystathionine gamma-syn 100.0 9.4E-28 3.2E-32 215.7 26.9 278 5-330 71-391 (392)
143 3e9k_A Kynureninase; kynurenin 100.0 4.6E-29 1.6E-33 229.4 18.7 288 5-332 116-460 (465)
144 3ecd_A Serine hydroxymethyltra 100.0 2.3E-28 7.7E-33 222.2 23.0 280 21-332 98-396 (425)
145 2vi8_A Serine hydroxymethyltra 100.0 1.1E-28 3.9E-33 222.8 20.6 290 9-332 78-386 (405)
146 1b9h_A AHBA synthase, protein 100.0 1.6E-28 5.4E-33 220.7 21.1 288 5-332 43-387 (388)
147 2oga_A Transaminase; PLP-depen 100.0 2.5E-28 8.5E-33 220.3 22.2 287 5-333 68-396 (399)
148 3nx3_A Acoat, acetylornithine 100.0 1.3E-28 4.6E-33 221.7 20.4 278 17-332 93-394 (395)
149 2eo5_A 419AA long hypothetical 100.0 5.8E-29 2E-33 225.8 18.0 289 9-333 95-418 (419)
150 1rv3_A Serine hydroxymethyltra 100.0 1E-28 3.5E-33 227.7 19.5 292 7-332 97-430 (483)
151 1qgn_A Protein (cystathionine 100.0 2.8E-27 9.6E-32 214.7 28.4 278 6-332 120-444 (445)
152 1ax4_A Tryptophanase; tryptoph 100.0 8.5E-28 2.9E-32 221.2 25.1 299 18-332 92-440 (467)
153 3gju_A Putative aminotransfera 100.0 4.7E-28 1.6E-32 222.3 23.2 299 13-332 108-455 (460)
154 1wyu_B Glycine dehydrogenase s 100.0 1.2E-28 4.2E-33 226.9 19.3 290 2-331 113-439 (474)
155 3gbx_A Serine hydroxymethyltra 100.0 1.6E-28 5.6E-33 222.8 19.6 283 13-332 89-395 (420)
156 1mdo_A ARNB aminotransferase; 100.0 3.5E-28 1.2E-32 218.8 20.9 275 18-332 55-385 (393)
157 1pff_A Methionine gamma-lyase; 100.0 3E-28 1E-32 214.2 19.7 274 7-329 5-330 (331)
158 1cs1_A CGS, protein (cystathio 100.0 5.2E-27 1.8E-31 210.7 28.0 275 5-332 57-382 (386)
159 3l44_A Glutamate-1-semialdehyd 100.0 4.2E-28 1.4E-32 221.2 20.1 289 16-333 110-430 (434)
160 3dxv_A Alpha-amino-epsilon-cap 100.0 1.8E-28 6.2E-33 223.9 17.6 299 9-333 95-425 (439)
161 3ke3_A Putative serine-pyruvat 100.0 1.8E-27 6.3E-32 213.1 23.4 287 13-333 48-376 (379)
162 3cog_A Cystathionine gamma-lya 100.0 5.1E-27 1.7E-31 211.5 26.2 182 6-220 73-262 (403)
163 1w23_A Phosphoserine aminotran 100.0 2.7E-29 9.2E-34 223.4 11.2 278 3-332 55-359 (360)
164 3pj0_A LMO0305 protein; struct 100.0 1.5E-28 5.1E-33 218.5 15.9 277 20-329 66-358 (359)
165 2oat_A Ornithine aminotransfer 100.0 1.3E-27 4.4E-32 218.0 22.0 275 17-332 133-438 (439)
166 3lws_A Aromatic amino acid bet 100.0 1.7E-28 5.9E-33 218.0 15.9 276 18-330 63-356 (357)
167 4a6r_A Omega transaminase; tra 100.0 7.7E-28 2.6E-32 220.9 20.6 303 2-332 100-448 (459)
168 1z7d_A Ornithine aminotransfer 100.0 1.2E-27 4.1E-32 217.9 20.9 276 17-333 122-429 (433)
169 3tfu_A Adenosylmethionine-8-am 100.0 5.7E-28 1.9E-32 221.2 18.5 293 6-333 124-453 (457)
170 3a8u_X Omega-amino acid--pyruv 100.0 4.5E-27 1.5E-31 215.3 23.7 301 4-333 97-447 (449)
171 1n8p_A Cystathionine gamma-lya 100.0 2.5E-27 8.6E-32 212.9 21.4 278 5-329 60-391 (393)
172 4ffc_A 4-aminobutyrate aminotr 100.0 1.2E-27 4E-32 219.1 19.1 296 17-333 125-449 (453)
173 3k28_A Glutamate-1-semialdehyd 100.0 1.5E-27 5E-32 217.2 19.4 290 16-334 108-428 (429)
174 3dod_A Adenosylmethionine-8-am 100.0 1.4E-27 4.8E-32 218.5 19.2 298 2-332 93-442 (448)
175 1gc0_A Methionine gamma-lyase; 100.0 1.3E-26 4.6E-31 208.8 25.3 262 19-328 82-396 (398)
176 3acz_A Methionine gamma-lyase; 100.0 1.5E-26 5.3E-31 207.7 25.2 263 19-332 76-388 (389)
177 2po3_A 4-dehydrase; external a 100.0 4.4E-27 1.5E-31 213.7 21.4 278 18-332 68-385 (424)
178 3vp6_A Glutamate decarboxylase 100.0 1.1E-26 3.9E-31 215.3 24.4 309 2-332 141-504 (511)
179 2z67_A O-phosphoseryl-tRNA(SEC 100.0 5E-27 1.7E-31 215.1 21.4 297 5-330 138-455 (456)
180 2c81_A Glutamine-2-deoxy-scyll 100.0 1.1E-26 3.7E-31 210.8 23.2 279 19-333 59-414 (418)
181 2dgk_A GAD-beta, GADB, glutama 100.0 1.4E-27 4.9E-32 218.7 17.6 292 12-332 93-433 (452)
182 2okj_A Glutamate decarboxylase 100.0 2.2E-26 7.6E-31 213.5 25.6 307 3-332 139-501 (504)
183 3fq8_A Glutamate-1-semialdehyd 100.0 1.2E-27 4.2E-32 217.7 16.8 282 16-332 107-426 (427)
184 2x3l_A ORN/Lys/Arg decarboxyla 100.0 8.6E-28 2.9E-32 219.3 15.7 280 4-333 61-353 (446)
185 2fnu_A Aminotransferase; prote 100.0 5.9E-27 2E-31 209.3 20.6 284 6-333 38-372 (375)
186 3h7f_A Serine hydroxymethyltra 100.0 1E-26 3.5E-31 212.6 22.1 280 20-332 109-413 (447)
187 2fyf_A PSAT, phosphoserine ami 99.9 4E-27 1.4E-31 212.3 18.3 280 5-333 83-398 (398)
188 3uwc_A Nucleotide-sugar aminot 99.9 1.2E-26 4.1E-31 207.4 21.2 286 5-333 43-371 (374)
189 2cb1_A O-acetyl homoserine sul 99.9 8.2E-26 2.8E-30 204.5 26.1 262 18-327 72-410 (412)
190 3ri6_A O-acetylhomoserine sulf 99.9 2.5E-26 8.7E-31 207.9 22.5 266 18-330 98-429 (430)
191 1js3_A DDC;, DOPA decarboxylas 99.9 2.8E-26 9.6E-31 212.0 21.9 287 18-332 140-473 (486)
192 3oks_A 4-aminobutyrate transam 99.9 3.5E-26 1.2E-30 209.2 22.3 293 17-332 122-450 (451)
193 3dr4_A Putative perosamine syn 99.9 4.2E-27 1.4E-31 211.7 15.7 275 18-330 72-390 (391)
194 1o69_A Aminotransferase; struc 99.9 2.7E-25 9.3E-30 200.0 27.3 282 18-332 48-386 (394)
195 3hbx_A GAD 1, glutamate decarb 99.9 2.2E-26 7.4E-31 213.0 20.5 294 13-333 108-444 (502)
196 2epj_A Glutamate-1-semialdehyd 99.9 1.4E-26 4.8E-31 211.0 17.8 280 16-332 111-430 (434)
197 2qma_A Diaminobutyrate-pyruvat 99.9 5.2E-26 1.8E-30 210.7 21.7 302 3-333 147-496 (497)
198 3i5t_A Aminotransferase; pyrid 99.9 1.1E-25 3.8E-30 207.0 23.0 300 7-332 104-453 (476)
199 3hmu_A Aminotransferase, class 99.9 2.6E-26 9.1E-31 210.9 18.8 298 8-332 107-451 (472)
200 4e1o_A HDC, histidine decarbox 99.9 1.5E-25 5.2E-30 206.5 22.6 303 2-332 124-477 (481)
201 2a7v_A Serine hydroxymethyltra 99.9 1.8E-25 6.1E-30 204.5 22.5 293 7-331 107-439 (490)
202 2oqx_A Tryptophanase; lyase, p 99.9 6.3E-26 2.2E-30 208.7 19.7 296 17-332 89-441 (467)
203 3frk_A QDTB; aminotransferase, 99.9 2E-26 6.7E-31 206.0 15.3 286 6-333 42-368 (373)
204 2cy8_A D-phgat, D-phenylglycin 99.9 8.4E-26 2.9E-30 207.0 19.2 287 2-333 103-435 (453)
205 3nyt_A Aminotransferase WBPE; 99.9 8.5E-26 2.9E-30 201.4 18.6 278 6-329 41-360 (367)
206 4e77_A Glutamate-1-semialdehyd 99.9 7.7E-26 2.6E-30 205.9 18.5 285 16-332 108-428 (429)
207 3nmy_A Xometc, cystathionine g 99.9 7.7E-25 2.6E-29 196.8 24.3 268 18-331 83-397 (400)
208 2jis_A Cysteine sulfinic acid 99.9 6.4E-25 2.2E-29 204.1 24.3 305 3-332 155-514 (515)
209 2e7u_A Glutamate-1-semialdehyd 99.9 1.2E-25 4.1E-30 204.3 18.8 278 16-330 107-424 (424)
210 2cjg_A L-lysine-epsilon aminot 99.9 5.8E-26 2E-30 207.7 16.8 281 15-332 117-447 (449)
211 3k40_A Aromatic-L-amino-acid d 99.9 3E-25 1E-29 204.0 21.5 302 2-332 119-470 (475)
212 2fq6_A Cystathionine beta-lyas 99.9 5E-25 1.7E-29 198.8 21.3 206 5-249 87-300 (415)
213 3ju7_A Putative PLP-dependent 99.9 2.4E-24 8.4E-29 192.3 24.5 289 4-333 40-375 (377)
214 2ctz_A O-acetyl-L-homoserine s 99.9 3.7E-24 1.3E-28 194.1 20.5 278 5-330 63-420 (421)
215 1c4k_A Protein (ornithine deca 99.9 2.8E-24 9.4E-29 205.0 19.5 308 6-332 179-565 (730)
216 2vyc_A Biodegradative arginine 99.9 8.1E-24 2.8E-28 203.4 21.2 297 18-332 222-604 (755)
217 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 3.1E-23 1E-27 189.1 23.1 286 6-332 68-435 (437)
218 1wyu_A Glycine dehydrogenase ( 99.9 7.4E-25 2.5E-29 199.8 12.1 278 8-330 116-437 (438)
219 3jzl_A Putative cystathionine 99.9 5.7E-23 2E-27 184.5 20.5 243 5-287 64-337 (409)
220 3b8x_A WBDK, pyridoxamine 5-ph 99.9 3.6E-22 1.2E-26 179.4 24.4 269 19-326 51-389 (390)
221 3i16_A Aluminum resistance pro 99.9 8E-23 2.7E-27 184.1 20.1 244 6-287 79-354 (427)
222 3hvy_A Cystathionine beta-lyas 99.9 1.4E-22 4.9E-27 182.5 19.7 243 6-287 80-354 (427)
223 3ht4_A Aluminum resistance pro 99.9 1.1E-22 3.7E-27 184.2 18.9 231 23-287 89-343 (431)
224 1ohv_A 4-aminobutyrate aminotr 99.9 1.7E-22 5.8E-27 185.6 19.0 288 13-333 123-471 (472)
225 2yky_A Beta-transaminase; tran 99.8 5E-25 1.7E-29 200.4 0.0 290 5-333 145-460 (465)
226 3e77_A Phosphoserine aminotran 99.9 5.3E-22 1.8E-26 175.6 11.8 284 6-333 64-375 (377)
227 3qm2_A Phosphoserine aminotran 99.9 8.4E-22 2.9E-26 175.3 12.0 281 6-333 78-385 (386)
228 3n75_A LDC, lysine decarboxyla 99.9 1.2E-20 4E-25 178.7 18.9 291 18-331 212-558 (715)
229 3hl2_A O-phosphoseryl-tRNA(SEC 99.9 3.5E-19 1.2E-23 157.4 26.2 306 3-333 124-461 (501)
230 3m5u_A Phosphoserine aminotran 99.8 2E-20 6.9E-25 164.9 16.2 279 6-334 56-361 (361)
231 4ao9_A Beta-phenylalanine amin 99.8 8.3E-19 2.8E-23 158.5 19.8 279 16-333 142-446 (454)
232 3ou5_A Serine hydroxymethyltra 99.8 2.7E-18 9.4E-23 151.0 20.5 288 12-331 112-439 (490)
233 3bc8_A O-phosphoseryl-tRNA(SEC 99.8 2.4E-17 8.2E-22 147.5 25.2 307 3-332 105-442 (450)
234 4atq_A 4-aminobutyrate transam 99.8 6.3E-17 2.2E-21 146.8 20.9 296 17-333 125-455 (456)
235 4e3q_A Pyruvate transaminase; 99.7 2.8E-16 9.5E-21 143.1 23.1 292 12-332 123-467 (473)
236 4a0g_A Adenosylmethionine-8-am 99.7 3.7E-17 1.3E-21 158.4 11.8 232 82-333 577-828 (831)
237 2yvq_A Carbamoyl-phosphate syn 86.8 3.8 0.00013 30.2 8.2 120 3-136 10-131 (143)
238 4fgs_A Probable dehydrogenase 86.5 2.5 8.6E-05 35.0 7.8 102 18-126 29-134 (273)
239 4fn4_A Short chain dehydrogena 82.3 7.1 0.00024 31.9 8.7 101 18-125 7-115 (254)
240 3gh5_A HEX1, beta-hexosaminida 82.2 5.7 0.0002 36.2 8.7 25 110-134 249-273 (525)
241 4g81_D Putative hexonate dehyd 82.2 11 0.00037 30.8 9.7 101 18-125 9-116 (255)
242 3tpc_A Short chain alcohol deh 82.1 8.5 0.00029 31.2 9.2 101 18-124 7-114 (257)
243 2gjx_A Beta-hexosaminidase alp 81.6 5.7 0.00019 36.2 8.5 27 109-135 207-233 (507)
244 3rwb_A TPLDH, pyridoxal 4-dehy 81.0 5.9 0.0002 32.0 7.8 101 18-124 6-109 (247)
245 1iv0_A Hypothetical protein; r 80.2 4.3 0.00015 27.7 5.5 59 77-140 36-96 (98)
246 3ged_A Short-chain dehydrogena 76.7 14 0.00047 30.0 8.6 99 19-125 3-105 (247)
247 1now_A Beta-hexosaminidase bet 76.0 11 0.00039 34.1 8.7 24 111-134 214-237 (507)
248 3gem_A Short chain dehydrogena 76.0 19 0.00064 29.3 9.4 98 19-124 28-127 (260)
249 3m1a_A Putative dehydrogenase; 75.8 13 0.00046 30.4 8.7 100 19-124 6-108 (281)
250 4gkb_A 3-oxoacyl-[acyl-carrier 75.8 15 0.0005 30.1 8.6 101 18-125 7-112 (258)
251 3gvc_A Oxidoreductase, probabl 73.8 11 0.00036 31.1 7.4 100 19-124 30-132 (277)
252 1jak_A Beta-N-acetylhexosamini 73.5 12 0.00042 34.0 8.2 25 111-135 225-249 (512)
253 1g94_A Alpha-amylase; beta-alp 73.0 6.5 0.00022 35.1 6.3 26 115-140 63-88 (448)
254 3tzq_B Short-chain type dehydr 72.8 22 0.00075 29.0 9.2 101 18-124 11-116 (271)
255 3pxx_A Carveol dehydrogenase; 72.8 9.4 0.00032 31.4 7.0 101 18-124 10-126 (287)
256 1uls_A Putative 3-oxoacyl-acyl 72.7 19 0.00064 28.9 8.6 98 19-124 6-106 (245)
257 2ew8_A (S)-1-phenylethanol deh 71.3 29 0.00098 27.8 9.4 100 19-124 8-111 (249)
258 1vhx_A Putative holliday junct 70.9 7.6 0.00026 28.8 5.3 59 77-140 40-101 (150)
259 3ppi_A 3-hydroxyacyl-COA dehyd 70.9 21 0.00073 29.1 8.7 99 19-124 31-138 (281)
260 3tfo_A Putative 3-oxoacyl-(acy 70.6 23 0.0008 28.8 8.8 102 18-124 4-110 (264)
261 4e6p_A Probable sorbitol dehyd 70.1 32 0.0011 27.7 9.5 100 19-124 9-111 (259)
262 4ibo_A Gluconate dehydrogenase 69.6 28 0.00096 28.4 9.1 102 18-124 26-132 (271)
263 3dii_A Short-chain dehydrogena 69.6 23 0.00078 28.4 8.5 99 19-124 3-104 (247)
264 4dqx_A Probable oxidoreductase 69.5 29 0.00099 28.4 9.2 100 19-124 28-130 (277)
265 2epl_X N-acetyl-beta-D-glucosa 69.4 25 0.00085 32.9 9.4 106 15-134 43-162 (627)
266 4fc7_A Peroxisomal 2,4-dienoyl 69.3 27 0.00092 28.5 9.0 102 18-124 27-134 (277)
267 4dyv_A Short-chain dehydrogena 68.6 20 0.00069 29.3 8.0 101 18-124 28-132 (272)
268 1ofu_X SULA, hypothetical prot 67.5 30 0.001 24.4 9.6 101 19-134 6-114 (119)
269 3op4_A 3-oxoacyl-[acyl-carrier 67.2 32 0.0011 27.5 8.8 101 18-124 9-112 (248)
270 3rjz_A N-type ATP pyrophosphat 67.0 28 0.00097 27.9 8.2 100 19-134 7-120 (237)
271 1nu0_A Hypothetical protein YQ 66.9 12 0.0004 27.3 5.4 59 78-141 39-100 (138)
272 4b79_A PA4098, probable short- 66.0 38 0.0013 27.3 8.9 94 18-125 11-106 (242)
273 3grp_A 3-oxoacyl-(acyl carrier 65.4 28 0.00097 28.2 8.3 100 19-124 28-130 (266)
274 1hxh_A 3BETA/17BETA-hydroxyste 65.4 33 0.0011 27.4 8.7 100 19-124 7-109 (253)
275 4eso_A Putative oxidoreductase 65.4 37 0.0013 27.3 9.0 100 19-124 9-111 (255)
276 3ozo_A N-acetylglucosaminidase 65.3 30 0.001 31.9 9.0 24 111-134 250-273 (572)
277 3kvo_A Hydroxysteroid dehydrog 64.9 65 0.0022 27.4 11.2 100 19-124 46-158 (346)
278 1vl8_A Gluconate 5-dehydrogena 64.5 31 0.0011 28.0 8.4 101 19-124 22-128 (267)
279 1hjs_A Beta-1,4-galactanase; 4 64.5 12 0.00041 31.9 5.9 37 107-143 50-86 (332)
280 3sju_A Keto reductase; short-c 64.5 28 0.00096 28.5 8.1 102 18-124 24-130 (279)
281 4dmm_A 3-oxoacyl-[acyl-carrier 64.4 21 0.00073 29.0 7.3 101 18-124 28-135 (269)
282 3t7c_A Carveol dehydrogenase; 64.4 35 0.0012 28.2 8.8 100 19-124 29-147 (299)
283 3l6e_A Oxidoreductase, short-c 63.8 31 0.0011 27.3 8.1 99 20-124 5-106 (235)
284 3rkr_A Short chain oxidoreduct 63.7 41 0.0014 27.1 8.9 102 18-124 29-136 (262)
285 3qlj_A Short chain dehydrogena 63.1 32 0.0011 28.8 8.4 101 18-124 27-143 (322)
286 3e2i_A Thymidine kinase; Zn-bi 62.9 6.7 0.00023 31.1 3.7 116 27-169 43-161 (219)
287 2o23_A HADH2 protein; HSD17B10 62.7 57 0.002 26.0 10.6 82 19-106 13-95 (265)
288 3is3_A 17BETA-hydroxysteroid d 62.7 22 0.00074 29.0 7.1 101 18-124 18-125 (270)
289 3nyw_A Putative oxidoreductase 62.4 28 0.00095 27.9 7.6 102 18-124 7-115 (250)
290 3n74_A 3-ketoacyl-(acyl-carrie 62.4 41 0.0014 26.9 8.7 100 19-124 10-113 (261)
291 2yv2_A Succinyl-COA synthetase 62.1 15 0.00052 30.7 6.0 49 80-140 84-132 (297)
292 3uve_A Carveol dehydrogenase ( 61.7 24 0.00084 28.9 7.3 101 18-124 11-134 (286)
293 1c7s_A Beta-N-acetylhexosamini 61.7 17 0.00059 35.2 6.9 26 109-134 392-417 (858)
294 3oid_A Enoyl-[acyl-carrier-pro 61.5 47 0.0016 26.7 8.9 101 18-124 4-111 (258)
295 3tsc_A Putative oxidoreductase 61.5 24 0.00083 28.8 7.2 101 18-124 11-130 (277)
296 3imf_A Short chain dehydrogena 60.9 43 0.0015 26.9 8.6 103 18-125 6-113 (257)
297 1x1t_A D(-)-3-hydroxybutyrate 60.8 55 0.0019 26.2 9.2 101 19-124 5-112 (260)
298 1jr2_A Uroporphyrinogen-III sy 60.6 11 0.00039 31.1 5.0 84 20-108 136-221 (286)
299 3sx2_A Putative 3-ketoacyl-(ac 60.3 22 0.00074 29.0 6.7 98 19-124 14-127 (278)
300 3ijr_A Oxidoreductase, short c 60.3 62 0.0021 26.6 9.6 100 19-124 48-155 (291)
301 2yv1_A Succinyl-COA ligase [AD 59.9 10 0.00036 31.6 4.6 48 81-140 84-131 (294)
302 3bk2_A RNAse J, metal dependen 59.7 48 0.0017 30.5 9.5 79 39-131 337-423 (562)
303 2yxb_A Coenzyme B12-dependent 59.5 29 0.00098 25.9 6.6 54 61-130 44-97 (161)
304 3pgx_A Carveol dehydrogenase; 59.3 31 0.0011 28.2 7.5 101 18-124 15-134 (280)
305 2nu8_A Succinyl-COA ligase [AD 59.1 17 0.00058 30.2 5.8 48 80-139 77-124 (288)
306 4egf_A L-xylulose reductase; s 59.0 42 0.0014 27.1 8.2 102 18-124 20-127 (266)
307 3rih_A Short chain dehydrogena 58.6 76 0.0026 26.1 10.4 102 18-124 41-148 (293)
308 1nff_A Putative oxidoreductase 58.5 50 0.0017 26.6 8.5 100 19-124 8-110 (260)
309 1iuk_A Hypothetical protein TT 58.1 19 0.00064 26.2 5.2 21 120-140 107-127 (140)
310 3oec_A Carveol dehydrogenase ( 58.0 31 0.0011 28.9 7.4 101 18-124 46-164 (317)
311 3osu_A 3-oxoacyl-[acyl-carrier 57.9 35 0.0012 27.2 7.4 100 19-124 5-111 (246)
312 2a4k_A 3-oxoacyl-[acyl carrier 57.8 36 0.0012 27.5 7.6 100 19-124 7-109 (263)
313 3h7a_A Short chain dehydrogena 57.4 72 0.0025 25.4 11.6 100 19-124 8-112 (252)
314 1xky_A Dihydrodipicolinate syn 57.1 51 0.0017 27.5 8.4 59 74-135 25-86 (301)
315 4imr_A 3-oxoacyl-(acyl-carrier 56.9 78 0.0027 25.7 10.3 101 18-124 33-138 (275)
316 1y80_A Predicted cobalamin bin 56.8 45 0.0016 25.9 7.7 60 61-136 114-177 (210)
317 3p19_A BFPVVD8, putative blue 56.6 51 0.0018 26.7 8.3 98 18-124 16-116 (266)
318 1oi7_A Succinyl-COA synthetase 56.5 17 0.00057 30.3 5.3 48 81-140 78-125 (288)
319 1lwj_A 4-alpha-glucanotransfer 56.4 28 0.00096 30.8 7.1 27 115-141 68-94 (441)
320 2wkj_A N-acetylneuraminate lya 56.4 87 0.003 26.1 9.8 59 74-135 24-85 (303)
321 3ftp_A 3-oxoacyl-[acyl-carrier 56.3 50 0.0017 26.8 8.2 101 18-124 28-134 (270)
322 2gjh_A Designed protein; oblig 56.1 21 0.00071 20.4 3.9 28 306-333 3-30 (62)
323 3zv4_A CIS-2,3-dihydrobiphenyl 56.0 33 0.0011 28.0 7.1 80 19-104 6-86 (281)
324 1iy8_A Levodione reductase; ox 55.7 55 0.0019 26.4 8.4 101 19-124 14-122 (267)
325 3u9l_A 3-oxoacyl-[acyl-carrier 55.2 55 0.0019 27.5 8.5 100 19-124 6-116 (324)
326 3dhu_A Alpha-amylase; structur 55.1 26 0.0009 31.1 6.7 26 115-140 82-107 (449)
327 1fob_A Beta-1,4-galactanase; B 55.0 32 0.0011 29.2 6.9 37 107-143 50-86 (334)
328 3gaf_A 7-alpha-hydroxysteroid 54.9 68 0.0023 25.7 8.8 101 18-124 12-117 (256)
329 2fp4_A Succinyl-COA ligase [GD 54.8 14 0.00049 31.0 4.6 48 81-140 85-133 (305)
330 1xkq_A Short-chain reductase f 54.5 49 0.0017 26.9 7.9 101 19-124 7-119 (280)
331 2uvd_A 3-oxoacyl-(acyl-carrier 54.4 64 0.0022 25.5 8.5 100 19-124 5-111 (246)
332 4gqr_A Pancreatic alpha-amylas 54.3 9.6 0.00033 34.2 3.8 27 115-141 75-101 (496)
333 3a28_C L-2.3-butanediol dehydr 54.3 53 0.0018 26.3 8.0 100 19-124 3-110 (258)
334 3l21_A DHDPS, dihydrodipicolin 54.2 69 0.0023 26.7 8.8 59 74-135 28-89 (304)
335 1xhl_A Short-chain dehydrogena 54.1 50 0.0017 27.3 8.0 101 19-124 27-137 (297)
336 3qiv_A Short-chain dehydrogena 54.0 76 0.0026 25.2 8.9 102 18-124 9-118 (253)
337 3lyl_A 3-oxoacyl-(acyl-carrier 53.9 80 0.0027 24.9 9.6 100 19-124 6-111 (247)
338 1fmc_A 7 alpha-hydroxysteroid 53.2 82 0.0028 24.8 9.3 100 19-124 12-116 (255)
339 3tl3_A Short-chain type dehydr 53.1 32 0.0011 27.6 6.5 96 19-124 10-112 (257)
340 3un1_A Probable oxidoreductase 53.1 87 0.003 25.1 9.6 95 18-124 28-125 (260)
341 2q5c_A NTRC family transcripti 52.0 79 0.0027 24.3 10.1 74 19-107 30-104 (196)
342 1ccw_A Protein (glutamate muta 51.9 54 0.0018 23.5 6.9 60 61-136 29-91 (137)
343 1oft_A SULA, hypothetical prot 51.8 72 0.0025 23.8 9.0 101 19-134 48-156 (161)
344 3ezl_A Acetoacetyl-COA reducta 51.7 88 0.003 24.8 10.5 104 16-124 11-120 (256)
345 3cpr_A Dihydrodipicolinate syn 51.6 83 0.0028 26.2 8.9 59 74-135 29-90 (304)
346 4dzz_A Plasmid partitioning pr 51.3 28 0.00096 26.6 5.7 50 22-72 57-106 (206)
347 3v8b_A Putative dehydrogenase, 51.2 68 0.0023 26.2 8.3 102 18-124 28-135 (283)
348 3cxt_A Dehydrogenase with diff 51.2 70 0.0024 26.3 8.4 101 19-124 35-140 (291)
349 3ff4_A Uncharacterized protein 51.0 22 0.00076 25.2 4.5 16 120-135 95-110 (122)
350 3u5t_A 3-oxoacyl-[acyl-carrier 50.9 96 0.0033 25.0 9.4 101 18-124 27-134 (267)
351 3flu_A DHDPS, dihydrodipicolin 50.7 74 0.0025 26.4 8.4 59 74-135 20-81 (297)
352 2x9g_A PTR1, pteridine reducta 50.5 61 0.0021 26.4 7.9 87 19-106 24-115 (288)
353 3f1l_A Uncharacterized oxidore 50.5 90 0.0031 24.8 8.8 104 18-124 12-122 (252)
354 3mwd_B ATP-citrate synthase; A 50.0 22 0.00074 30.3 5.0 74 48-139 64-140 (334)
355 2d1y_A Hypothetical protein TT 49.7 97 0.0033 24.7 9.4 97 19-124 7-106 (256)
356 1spx_A Short-chain reductase f 49.6 54 0.0018 26.5 7.4 82 19-105 7-94 (278)
357 2csu_A 457AA long hypothetical 49.3 16 0.00054 32.7 4.2 54 81-141 78-132 (457)
358 3bh4_A Alpha-amylase; calcium, 49.2 43 0.0015 30.0 7.2 26 115-140 77-102 (483)
359 3pff_A ATP-citrate synthase; p 49.2 18 0.00061 35.0 4.8 73 48-138 550-625 (829)
360 3tox_A Short chain dehydrogena 49.1 81 0.0028 25.7 8.4 102 18-124 8-115 (280)
361 3dmy_A Protein FDRA; predicted 48.8 15 0.00052 33.0 4.0 72 48-138 21-94 (480)
362 3dz1_A Dihydrodipicolinate syn 48.5 67 0.0023 26.9 7.9 59 74-135 21-81 (313)
363 3czg_A Sucrose hydrolase; (alp 48.4 37 0.0013 31.8 6.8 60 79-140 103-179 (644)
364 2orv_A Thymidine kinase; TP4A 48.2 77 0.0026 25.3 7.7 115 18-157 19-141 (234)
365 1y81_A Conserved hypothetical 48.2 62 0.0021 23.3 6.7 22 119-140 105-126 (138)
366 1zk4_A R-specific alcohol dehy 48.0 99 0.0034 24.3 8.7 100 19-124 7-111 (251)
367 1hdc_A 3-alpha, 20 beta-hydrox 48.0 1E+02 0.0035 24.5 9.3 100 19-124 6-108 (254)
368 1zem_A Xylitol dehydrogenase; 47.9 89 0.003 25.0 8.4 101 19-124 8-114 (262)
369 3nrc_A Enoyl-[acyl-carrier-pro 47.8 1.1E+02 0.0038 24.8 9.8 100 19-124 27-137 (280)
370 1wpc_A Glucan 1,4-alpha-maltoh 47.8 46 0.0016 29.8 7.2 26 115-140 81-106 (485)
371 1wzu_A Quinolinate synthetase 47.7 14 0.00047 30.9 3.3 80 40-130 137-224 (300)
372 3edf_A FSPCMD, cyclomaltodextr 47.7 43 0.0015 31.1 7.1 60 79-140 145-222 (601)
373 3lf2_A Short chain oxidoreduct 47.6 1E+02 0.0034 24.7 8.7 103 18-125 8-117 (265)
374 3sc4_A Short chain dehydrogena 47.5 1.1E+02 0.0039 24.8 11.6 100 19-124 10-122 (285)
375 2ojp_A DHDPS, dihydrodipicolin 47.5 83 0.0028 26.0 8.2 58 75-135 15-75 (292)
376 3tjr_A Short chain dehydrogena 47.4 1.2E+02 0.004 25.0 9.3 101 19-124 32-137 (301)
377 3inp_A D-ribulose-phosphate 3- 47.4 1.1E+02 0.0038 24.6 9.0 32 54-90 101-132 (246)
378 3tak_A DHDPS, dihydrodipicolin 47.3 84 0.0029 26.0 8.2 59 74-135 14-75 (291)
379 3gi1_A LBP, laminin-binding pr 47.3 1.2E+02 0.0041 25.0 9.3 79 40-135 178-256 (286)
380 3b4u_A Dihydrodipicolinate syn 47.1 82 0.0028 26.1 8.1 58 75-135 17-77 (294)
381 3l77_A Short-chain alcohol deh 46.9 57 0.0019 25.6 7.0 100 20-124 4-109 (235)
382 2yl5_A Beta-N-acetylhexosamini 46.7 17 0.00057 32.4 3.9 27 108-134 86-112 (442)
383 2z1n_A Dehydrogenase; reductas 46.7 1.1E+02 0.0037 24.4 8.9 100 19-124 8-114 (260)
384 3svt_A Short-chain type dehydr 46.5 71 0.0024 25.9 7.7 102 18-124 11-121 (281)
385 2d59_A Hypothetical protein PH 46.4 37 0.0013 24.7 5.2 21 119-139 113-133 (144)
386 2et6_A (3R)-hydroxyacyl-COA de 46.4 1.3E+02 0.0043 28.0 10.0 98 18-125 322-425 (604)
387 4dry_A 3-oxoacyl-[acyl-carrier 46.4 63 0.0022 26.4 7.3 102 18-124 33-141 (281)
388 3nkl_A UDP-D-quinovosamine 4-d 46.2 52 0.0018 23.3 6.1 44 81-135 54-97 (141)
389 3pzt_A Endoglucanase; alpha/be 46.0 38 0.0013 28.6 6.0 23 116-138 104-126 (327)
390 3pk0_A Short-chain dehydrogena 45.7 1.1E+02 0.0039 24.4 9.5 102 18-124 10-117 (262)
391 3r1i_A Short-chain type dehydr 45.7 1.2E+02 0.0041 24.6 9.7 101 19-124 33-138 (276)
392 3o38_A Short chain dehydrogena 45.6 1E+02 0.0035 24.6 8.5 101 19-124 23-130 (266)
393 2q2v_A Beta-D-hydroxybutyrate 45.4 1.1E+02 0.0039 24.2 10.4 100 19-124 5-108 (255)
394 1pq4_A Periplasmic binding pro 45.3 1.2E+02 0.004 25.0 8.8 77 40-135 189-265 (291)
395 3r3s_A Oxidoreductase; structu 45.2 92 0.0031 25.5 8.2 101 18-124 49-158 (294)
396 3si9_A DHDPS, dihydrodipicolin 45.1 76 0.0026 26.6 7.7 59 74-135 35-96 (315)
397 2jah_A Clavulanic acid dehydro 45.1 1.1E+02 0.0039 24.1 9.1 101 19-124 8-113 (247)
398 2fwm_X 2,3-dihydro-2,3-dihydro 45.0 1.1E+02 0.0039 24.1 10.6 93 19-124 8-103 (250)
399 3i1j_A Oxidoreductase, short c 44.8 75 0.0026 25.0 7.5 102 18-124 14-124 (247)
400 3ioy_A Short-chain dehydrogena 44.8 1.3E+02 0.0046 24.9 9.4 101 19-124 9-116 (319)
401 2r8w_A AGR_C_1641P; APC7498, d 44.7 90 0.0031 26.4 8.1 59 74-135 47-108 (332)
402 3qp9_A Type I polyketide synth 44.7 87 0.003 28.4 8.5 104 14-124 247-371 (525)
403 2cfc_A 2-(R)-hydroxypropyl-COM 44.4 1E+02 0.0034 24.2 8.2 100 20-124 4-112 (250)
404 1ht6_A AMY1, alpha-amylase iso 44.4 18 0.00061 31.7 3.8 27 115-141 67-93 (405)
405 1geg_A Acetoin reductase; SDR 44.3 1.2E+02 0.004 24.1 9.3 100 20-124 4-108 (256)
406 3m5v_A DHDPS, dihydrodipicolin 44.2 76 0.0026 26.4 7.5 58 75-135 21-82 (301)
407 4iiu_A 3-oxoacyl-[acyl-carrier 44.1 1.2E+02 0.0041 24.3 8.7 101 19-124 27-133 (267)
408 3v7e_A Ribosome-associated pro 44.1 28 0.00094 22.6 3.8 44 81-136 16-59 (82)
409 2j9r_A Thymidine kinase; TK1, 43.8 20 0.00067 28.4 3.5 117 18-157 28-153 (214)
410 3vup_A Beta-1,4-mannanase; TIM 43.8 49 0.0017 27.3 6.5 60 78-138 38-111 (351)
411 4e3z_A Putative oxidoreductase 43.8 1.2E+02 0.0043 24.2 9.5 102 17-124 25-134 (272)
412 1f6k_A N-acetylneuraminate lya 43.5 90 0.0031 25.8 7.8 58 75-135 17-78 (293)
413 3bc9_A AMYB, alpha amylase, ca 43.5 41 0.0014 31.2 6.2 26 115-140 207-232 (599)
414 3rd5_A Mypaa.01249.C; ssgcid, 43.4 62 0.0021 26.5 6.9 76 19-104 17-93 (291)
415 1edo_A Beta-keto acyl carrier 43.2 1.2E+02 0.004 23.7 9.8 99 20-124 3-108 (244)
416 3gk3_A Acetoacetyl-COA reducta 43.2 1.3E+02 0.0043 24.2 9.7 101 18-124 25-132 (269)
417 1mxg_A Alpha amylase; hyperthe 43.1 19 0.00065 31.9 3.8 26 115-140 85-110 (435)
418 1ud2_A Amylase, alpha-amylase; 43.1 19 0.00064 32.4 3.8 26 115-140 79-104 (480)
419 1g0o_A Trihydroxynaphthalene r 42.9 1.3E+02 0.0045 24.3 9.4 100 19-124 30-136 (283)
420 1hvx_A Alpha-amylase; hydrolas 42.8 19 0.00064 32.8 3.8 27 115-141 80-106 (515)
421 3v2g_A 3-oxoacyl-[acyl-carrier 42.8 1E+02 0.0036 24.8 8.1 101 18-124 31-138 (271)
422 3qze_A DHDPS, dihydrodipicolin 42.7 75 0.0026 26.7 7.2 59 74-135 36-97 (314)
423 2yl6_A Beta-N-acetylhexosamini 42.6 16 0.00056 32.4 3.2 27 108-134 83-109 (434)
424 3ak4_A NADH-dependent quinucli 42.6 1.3E+02 0.0044 24.0 9.4 100 19-124 13-115 (263)
425 1xg5_A ARPG836; short chain de 42.5 1.3E+02 0.0044 24.2 8.7 101 19-124 33-140 (279)
426 1g5a_A Amylosucrase; glycosylt 42.3 51 0.0017 30.8 6.7 60 79-140 110-186 (628)
427 1tks_A 3,4-dihydroxy-2-butanon 41.9 56 0.0019 25.5 5.7 37 95-134 157-193 (204)
428 3h5d_A DHDPS, dihydrodipicolin 41.9 80 0.0027 26.4 7.3 59 74-135 20-81 (311)
429 3na8_A Putative dihydrodipicol 41.8 65 0.0022 27.0 6.7 59 74-135 37-98 (315)
430 3afn_B Carbonyl reductase; alp 41.7 1.3E+02 0.0043 23.7 10.5 101 19-124 8-115 (258)
431 4dpp_A DHDPS 2, dihydrodipicol 41.6 1.4E+02 0.0049 25.5 8.9 59 74-135 72-133 (360)
432 2qq5_A DHRS1, dehydrogenase/re 41.6 1.1E+02 0.0038 24.3 8.1 81 19-104 6-90 (260)
433 1x7f_A Outer surface protein; 41.5 95 0.0032 26.9 7.7 56 80-138 39-95 (385)
434 3mfq_A TROA, high-affinity zin 41.2 89 0.003 25.7 7.4 78 44-135 166-243 (282)
435 4aee_A Alpha amylase, catalyti 41.1 43 0.0015 31.7 6.1 61 78-140 261-335 (696)
436 3bzy_B ESCU; auto cleavage pro 41.0 17 0.00057 23.9 2.3 20 119-138 29-48 (83)
437 2guy_A Alpha-amylase A; (beta- 40.6 21 0.00073 31.9 3.8 27 115-141 96-122 (478)
438 4aie_A Glucan 1,6-alpha-glucos 40.6 21 0.00072 32.5 3.8 26 115-140 78-103 (549)
439 1w6u_A 2,4-dienoyl-COA reducta 40.6 1.5E+02 0.005 24.1 9.6 101 19-124 27-133 (302)
440 1jae_A Alpha-amylase; glycosid 40.3 18 0.00063 32.4 3.3 27 115-141 73-99 (471)
441 4gmf_A Yersiniabactin biosynth 40.3 62 0.0021 27.9 6.5 32 101-139 97-128 (372)
442 1xx6_A Thymidine kinase; NESG, 40.3 1.1E+02 0.0036 23.5 7.2 117 18-157 8-133 (191)
443 1gcy_A Glucan 1,4-alpha-maltot 40.2 22 0.00074 32.5 3.8 27 115-141 91-117 (527)
444 2ehd_A Oxidoreductase, oxidore 40.2 1.3E+02 0.0044 23.3 8.4 99 19-124 6-107 (234)
445 1wza_A Alpha-amylase A; hydrol 40.0 23 0.00078 31.9 3.9 26 115-140 80-105 (488)
446 3mw8_A Uroporphyrinogen-III sy 39.8 21 0.00073 28.5 3.3 11 61-71 141-151 (240)
447 3rku_A Oxidoreductase YMR226C; 39.8 51 0.0017 27.1 5.7 102 19-125 34-146 (287)
448 2z1k_A (NEO)pullulanase; hydro 39.7 23 0.00077 31.7 3.8 27 115-141 95-121 (475)
449 3e03_A Short chain dehydrogena 39.7 1.5E+02 0.005 23.9 11.5 100 19-124 7-119 (274)
450 3j21_Z 50S ribosomal protein L 39.5 84 0.0029 21.0 6.4 44 80-135 19-62 (99)
451 1ja9_A 4HNR, 1,3,6,8-tetrahydr 39.4 1.4E+02 0.0049 23.7 8.5 100 19-124 22-128 (274)
452 2rhc_B Actinorhodin polyketide 39.4 1.5E+02 0.0051 23.9 9.6 101 19-124 23-128 (277)
453 3k1d_A 1,4-alpha-glucan-branch 39.2 68 0.0023 30.6 7.0 76 64-142 246-338 (722)
454 2hmc_A AGR_L_411P, dihydrodipi 39.2 79 0.0027 26.9 6.9 59 75-136 40-98 (344)
455 2aaa_A Alpha-amylase; glycosid 39.0 23 0.00077 31.9 3.7 27 115-141 96-122 (484)
456 2b4q_A Rhamnolipids biosynthes 38.9 1.5E+02 0.0052 23.9 8.8 100 19-124 30-134 (276)
457 3zq4_A Ribonuclease J 1, RNAse 38.9 1.1E+02 0.0037 28.1 8.2 79 39-131 322-408 (555)
458 3ucx_A Short chain dehydrogena 38.8 1.5E+02 0.0051 23.7 9.5 102 18-124 11-118 (264)
459 1xrs_B D-lysine 5,6-aminomutas 38.5 1.6E+02 0.0054 24.0 11.5 101 22-136 101-221 (262)
460 3s5o_A 4-hydroxy-2-oxoglutarat 38.3 80 0.0027 26.4 6.7 59 74-135 27-88 (307)
461 3u5e_c L32, RP73, YL38, 60S ri 38.1 76 0.0026 21.6 5.5 42 81-134 27-68 (105)
462 2pju_A Propionate catabolism o 38.1 1.5E+02 0.0051 23.5 8.8 76 19-107 40-116 (225)
463 3ai3_A NADPH-sorbose reductase 37.9 1.5E+02 0.0052 23.5 9.4 101 19-124 8-114 (263)
464 3ek2_A Enoyl-(acyl-carrier-pro 37.8 1.5E+02 0.0052 23.5 9.5 100 18-124 14-126 (271)
465 2v9d_A YAGE; dihydrodipicolini 37.8 87 0.003 26.7 6.9 58 75-135 45-105 (343)
466 1mxh_A Pteridine reductase 2; 37.7 1.2E+02 0.004 24.4 7.7 83 19-106 12-103 (276)
467 2h7i_A Enoyl-[acyl-carrier-pro 37.5 1.6E+02 0.0054 23.6 8.6 100 19-124 8-121 (269)
468 2ya0_A Putative alkaline amylo 37.3 23 0.00079 33.7 3.6 25 116-140 254-278 (714)
469 1ua7_A Alpha-amylase; beta-alp 37.3 21 0.00073 31.4 3.1 27 115-141 73-99 (422)
470 1w41_A 50S ribosomal protein L 37.2 93 0.0032 20.9 6.0 43 81-135 21-63 (101)
471 2dh2_A 4F2 cell-surface antige 37.1 28 0.00095 30.7 3.9 27 115-141 80-106 (424)
472 1w3i_A EDA, 2-keto-3-deoxy glu 36.7 1.4E+02 0.0047 24.7 7.9 52 75-129 13-64 (293)
473 3tsm_A IGPS, indole-3-glycerol 36.7 92 0.0032 25.5 6.6 49 77-137 128-176 (272)
474 3tla_A MCCF; serine protease, 36.7 68 0.0023 27.7 6.1 79 38-122 40-134 (371)
475 3a5f_A Dihydrodipicolinate syn 36.5 1.2E+02 0.004 25.1 7.4 57 75-135 16-75 (291)
476 2i2x_B MTAC, methyltransferase 36.4 1.2E+02 0.0039 24.6 7.3 59 61-135 149-209 (258)
477 3kzv_A Uncharacterized oxidore 36.4 1.3E+02 0.0044 23.9 7.6 100 19-124 3-108 (254)
478 2xzm_U Ribosomal protein L7AE 36.4 91 0.0031 22.1 5.8 45 80-135 28-72 (126)
479 3civ_A Endo-beta-1,4-mannanase 36.2 1.3E+02 0.0045 25.5 7.8 59 78-136 49-116 (343)
480 4h1h_A LMO1638 protein; MCCF-l 36.2 95 0.0032 26.2 6.9 78 38-121 9-102 (327)
481 2lbw_A H/ACA ribonucleoprotein 35.8 90 0.0031 21.9 5.7 45 80-135 24-68 (121)
482 3s55_A Putative short-chain de 35.7 1.7E+02 0.0059 23.5 9.7 101 18-124 10-128 (281)
483 1i4n_A Indole-3-glycerol phosp 35.7 45 0.0015 27.1 4.5 49 77-137 109-157 (251)
484 3e96_A Dihydrodipicolinate syn 35.7 83 0.0028 26.4 6.4 58 76-136 27-87 (316)
485 2fcj_A Small toprim domain pro 35.6 1.1E+02 0.0038 21.5 6.0 73 18-91 27-104 (119)
486 3vc3_A Beta-cyanoalnine syntha 35.6 37 0.0013 28.9 4.3 53 18-71 88-141 (344)
487 3fkr_A L-2-keto-3-deoxyarabona 35.3 73 0.0025 26.6 6.0 59 75-136 22-83 (309)
488 3d0c_A Dihydrodipicolinate syn 35.3 89 0.0031 26.2 6.6 58 75-135 26-86 (314)
489 2ehh_A DHDPS, dihydrodipicolin 35.3 1.3E+02 0.0043 24.9 7.4 57 76-135 15-74 (294)
490 2nuw_A 2-keto-3-deoxygluconate 35.2 1.4E+02 0.0047 24.6 7.7 52 75-129 13-64 (288)
491 4e5s_A MCCFLIKE protein (BA_56 35.2 87 0.003 26.5 6.5 78 38-121 9-102 (331)
492 2yxg_A DHDPS, dihydrodipicolin 35.1 1.2E+02 0.004 25.0 7.2 57 76-135 15-74 (289)
493 3pzg_A Mannan endo-1,4-beta-ma 35.0 94 0.0032 26.9 6.8 23 116-138 99-121 (383)
494 1yde_A Retinal dehydrogenase/r 34.8 1.8E+02 0.006 23.4 9.2 99 19-124 10-112 (270)
495 2zat_A Dehydrogenase/reductase 34.7 1.7E+02 0.0058 23.2 8.6 101 19-124 15-121 (260)
496 2nm0_A Probable 3-oxacyl-(acyl 34.6 1.7E+02 0.0059 23.2 8.6 74 19-106 22-96 (253)
497 2b8t_A Thymidine kinase; deoxy 34.6 35 0.0012 27.1 3.7 100 27-141 26-127 (223)
498 1wzl_A Alpha-amylase II; pullu 34.5 29 0.00099 32.1 3.7 60 80-141 171-244 (585)
499 2whl_A Beta-mannanase, baman5; 34.4 31 0.0011 28.5 3.5 24 115-138 62-85 (294)
500 2pcq_A Putative dihydrodipicol 34.4 43 0.0015 27.7 4.3 56 75-135 12-67 (283)
No 1
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=2.6e-47 Score=348.32 Aligned_cols=332 Identities=47% Similarity=0.953 Sum_probs=285.0
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccH
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
++|+.+..+..+.+++++|++|+|+++++..++.+++++||.|+++.|+|.++...+....|.+++.++.++++++.+|+
T Consensus 96 a~~~~~~~~~~~~~~~~~v~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 175 (435)
T 3piu_A 96 VDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITE 175 (435)
T ss_dssp HHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCH
T ss_pred HHHHHHhhCCCCCCCHHHEEEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCH
Confidence 45555544444667899999999999999999999999999999999999999887763579999999987666788999
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
++|++++++...++.++++|++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.|++..+.++..+..+.+.
T Consensus 176 ~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~ 255 (435)
T 3piu_A 176 TALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNC 255 (435)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC---
T ss_pred HHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhcccccc
Confidence 99999999876666689999999999999999999999999999999999999999999988887766676666542111
Q ss_pred C-----CCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHH
Q 019899 162 D-----KDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIK 236 (334)
Q Consensus 162 ~-----~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 236 (334)
+ .++++++.|+||.+|++|+|+||++++++.+.+.++.....++.+++.+.++..++...+++++++.+++++++
T Consensus 256 d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 335 (435)
T 3piu_A 256 DENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLK 335 (435)
T ss_dssp ----CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHHHHHHHHGGGSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHHHHHHHHhhcCCCCHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Confidence 1 46789999999999999999999999778888888888788888999999999999887776778888999999
Q ss_pred HHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCc
Q 019899 237 KLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTH 316 (334)
Q Consensus 237 ~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~ 316 (334)
++++++.+.|++.|+++..+.+|+++|++++.........+..++...|++++||.+.||..|+...++++|++++..++
T Consensus 336 ~~~~~l~~~L~~~g~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~ 415 (435)
T 3piu_A 336 QRQKKLVSGLQKSGISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPE 415 (435)
T ss_dssp HHHHHHHHHHHTTTCEECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSSCH
T ss_pred HHHHHHHHHHHhcCCcccCCCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCCCH
Confidence 99999999999999998888889999999987544333334568888988877999999999887778999999985599
Q ss_pred ccHHHHHHHHHHHHHHc
Q 019899 317 EDIPLVIERIQKVAETC 333 (334)
Q Consensus 317 ~~l~~~l~~l~~~~~~~ 333 (334)
+++++++++|++++++.
T Consensus 416 e~i~~~l~~l~~~l~~~ 432 (435)
T 3piu_A 416 RTLDLAMQRLKAFVGEY 432 (435)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999999875
No 2
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=2.9e-46 Score=340.70 Aligned_cols=333 Identities=44% Similarity=0.900 Sum_probs=274.8
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccH
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
|+|+.+.++...++++++|++++|+++++..++.+++++||+|+++.|+|.++...+....|.+++.+|.+.++++.+|+
T Consensus 93 a~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 172 (428)
T 1iay_A 93 AKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITS 172 (428)
T ss_dssp HHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCH
T ss_pred HHHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHHHHhcCCEEEEeecCCccCCcCCH
Confidence 45555544422337789999999999999999999999999999999999998875532679999999986546678999
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhc---
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEA--- 158 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~--- 158 (334)
+++++++++....+.++++|++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.|++..+.++..+...
T Consensus 173 ~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~ 252 (428)
T 1iay_A 173 KAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEM 252 (428)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGG
T ss_pred HHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhcccccc
Confidence 99999998755455579999999999999999999999999999999999999999999988866555555555431
Q ss_pred cccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 159 EEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 159 ~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
.....++++++.|+||.+|++|+|+||++++++++++.+++...+++.+++.+.++..++...++.++++.+.+++++++
T Consensus 253 ~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 332 (428)
T 1iay_A 253 TYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSSFGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKR 332 (428)
T ss_dssp TTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHHHHHHHHTTSCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCcEEEEecchhhcCCCCceEEEEEeCCHHHHHHHHHHHhcccCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHH
Confidence 01114788999999999999999999999877889888887777778899999999999988766677788899999999
Q ss_pred HHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCccc
Q 019899 239 YDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHED 318 (334)
Q Consensus 239 ~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~ 318 (334)
++++.+.|+++|+++..+.+|+++|++++.........+..++...|++++||.+.||..|+...++++|++++..++++
T Consensus 333 ~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~ 412 (428)
T 1iay_A 333 HKHFTNGLEVVGIKCLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGT 412 (428)
T ss_dssp HHHHHHHHHHTTCCBCCCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSSCHHH
T ss_pred HHHHHHHHHhcCCcccCCCeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEecCCHHH
Confidence 99999999998888877778999999997643211122345788887776799999998887555679999998679999
Q ss_pred HHHHHHHHHHHHHHcC
Q 019899 319 IPLVIERIQKVAETCK 334 (334)
Q Consensus 319 l~~~l~~l~~~~~~~~ 334 (334)
+++++++|++++++.|
T Consensus 413 i~~~~~~l~~~l~~~~ 428 (428)
T 1iay_A 413 VDIALARIRRFVGVEK 428 (428)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhccC
Confidence 9999999999998764
No 3
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=1.3e-45 Score=331.94 Aligned_cols=305 Identities=23% Similarity=0.419 Sum_probs=256.9
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccH
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
++|+.+..+ +.+++++|++|+|+++++..++.+++++||+|++++|+|+++...++ ..|.+++.+++++++++.+|+
T Consensus 78 a~~~~~~~g--~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~ 154 (385)
T 1b5p_A 78 AEKFRRENG--LSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVR-FAGGVVVEVETLPEEGFVPDP 154 (385)
T ss_dssp HHHHHHTTC--CCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHH-HTTCEEEEEECCGGGTTCCCH
T ss_pred HHHHHHHhC--CCCChHHEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHH-HcCCEEEEeecCcccCCCCCH
Confidence 456655444 56788999999999999999999999999999999999999999988 899999999986546778999
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
+++++++++ +++++++++|+||||.++|.+++++|+++|++||++||+||+|+.+.+++ ...++..+.
T Consensus 155 ~~l~~~l~~------~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~----- 222 (385)
T 1b5p_A 155 ERVRRAITP------RTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG-EHFSPGRVA----- 222 (385)
T ss_dssp HHHHTTCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS-CCCCGGGTC-----
T ss_pred HHHHHhcCC------CCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCCHHHcC-----
Confidence 999998875 78999999999999999999999999999999999999999999988865 444554442
Q ss_pred CCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc--cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHH
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLY 239 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (334)
.++++++.|+||.+|++|+|+||+++ ++++++.+...... ++.+.+.|.++..+++..+...+++.+.++++++++
T Consensus 223 -~~~~i~~~s~SK~~~~~G~RiG~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 300 (385)
T 1b5p_A 223 -PEHTLTVNGAAKAFAMTGWRIGYACG-PKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRR 300 (385)
T ss_dssp -TTTEEEEEESTTTTTCGGGCCEEEEC-CHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCEEEEEechhhcCCcccceEEEEe-CHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHH
Confidence 37899999999999999999999998 88888888765443 467888999888888651111345778889999999
Q ss_pred HHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccH
Q 019899 240 DSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDI 319 (334)
Q Consensus 240 ~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l 319 (334)
+++.+.|+++|+++..+.+++++|++++... .+..++...|+ ++||.+.||..|+. ++++|++++ .+++++
T Consensus 301 ~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~l~-~~gv~v~~g~~f~~--~~~iRis~~-~~~~~i 371 (385)
T 1b5p_A 301 DLLLEGLTALGLKAVRPSGAFYVLMDTSPIA-----PDEVRAAERLL-EAGVAVVPGTDFAA--FGHVRLSYA-TSEENL 371 (385)
T ss_dssp HHHHHHHHHHTCCBCCCSBTTEEEEECTTTC-----SSHHHHHHHHH-HTTEECEESGGGTC--TTEEEEECC-SCHHHH
T ss_pred HHHHHHHHHCCCeecCCCeeEEEEEecCCCC-----CCHHHHHHHHH-HCCeEEecccccCC--CCeEEEEec-CCHHHH
Confidence 9999999888888888889999999987421 24567888866 68999999999875 689999999 888999
Q ss_pred HHHHHHHHHHHHH
Q 019899 320 PLVIERIQKVAET 332 (334)
Q Consensus 320 ~~~l~~l~~~~~~ 332 (334)
++++++|++++++
T Consensus 372 ~~~l~~l~~~l~~ 384 (385)
T 1b5p_A 372 RKALERFARVLGR 384 (385)
T ss_dssp HHHHHHGGGGC--
T ss_pred HHHHHHHHHHHhh
Confidence 9999999887653
No 4
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=100.00 E-value=1.4e-44 Score=335.04 Aligned_cols=328 Identities=22% Similarity=0.379 Sum_probs=269.7
Q ss_pred ChhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc-CCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccc
Q 019899 1 MAGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLA-DHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~-~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~ 79 (334)
|++|+.++.+ +++++++|++|+|+++++..++.+++ ++||+|+++.|+|+++...++ ..|.+++.+++++++++.+
T Consensus 143 ia~~~~~~~g--~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~~~~ 219 (500)
T 3tcm_A 143 IASGIASRDG--FPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIA-LHGGALVPYYLNESTGWGL 219 (500)
T ss_dssp HHHHHHHHHS--SCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHHHHHH-HTTCEEEEEECBTTTTSBC
T ss_pred HHHHHHhhcC--CCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHHHHHH-HcCCEEEEEecccccCCCC
Confidence 3566766666 67889999999999999999999998 899999999999999999999 8999999999987778899
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCC-CCcchhhhhhhc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGN-EEFVSMAEILEA 158 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~-~~~~~~~~~~~~ 158 (334)
|+++|++++++....+.++++|++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.|++ ..+.++..+..+
T Consensus 220 d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~ 299 (500)
T 3tcm_A 220 ETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRS 299 (500)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHH
Confidence 9999999999876666789999999999999999999999999999999999999999999999854 355666554432
Q ss_pred cc--cCCCcEEEEecccccC-CCCCceEEEEeec--CHHHHHHHHHhhc-ccCCChHHHHHHHHhhCChH-------HHH
Q 019899 159 EE--VDKDRVHIIYGLSKDL-SLPGFRTGVIYSY--NESVLAAAKKLTR-FCSISAPTQRLLISMLSDTK-------FIQ 225 (334)
Q Consensus 159 ~~--~~~~~~~~~~s~sK~~-~~~g~r~g~i~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~-------~~~ 225 (334)
.+ .+..++++++|+||.+ |++|+|+||+++. ++++++.+..... .++.+.+.|.++..++...+ ...
T Consensus 300 ~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~ 379 (500)
T 3tcm_A 300 LGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIASVNLCSNITGQILASLVMNPPKASDESYASYK 379 (500)
T ss_dssp TTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHHHHHHHHTTCCCCHHHHHHHHHHHSCCCSSSTHHHHHH
T ss_pred hccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccccchhHHHHH
Confidence 11 1235678999999999 8999999999873 6778888876554 46778899999988887421 124
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCceeEEeeecCCcCC------CCChhhHHHHHHHHHHhcCeEEcCCCC
Q 019899 226 EYLETNKRRIKKLYDSFVAGLKQL-GIRCSESSAGLYCWADMSGLIP------SYSEKGELELWDKLLNIAKINVTPGSA 298 (334)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~ll~~~gi~v~~g~~ 298 (334)
++..+++++++++++++.+.|+++ |+++..+.+++++|+++..+.. .....+...++..+++++||.+.||+.
T Consensus 380 ~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~ 459 (500)
T 3tcm_A 380 AEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSG 459 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcEEecCCeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcc
Confidence 556788889999999999999998 8999999999999966542110 000012234566778889999999999
Q ss_pred cCC-CCCCeEEEEecCCCcccHHHHHHHHHHHHHH
Q 019899 299 CHC-IEPGWFRCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 299 ~~~-~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
|+. ...+++|++++ .+++++++++++|++++++
T Consensus 460 f~~~~g~~~iRis~~-~~~e~i~~~i~~l~~~~~~ 493 (500)
T 3tcm_A 460 FGQVPGTWHFRCTIL-PQEDKIPAVISRFTVFHEA 493 (500)
T ss_dssp TCCCTTCCBEEEESC-SCTTTHHHHHHHHHHHHHH
T ss_pred cCCCCCCCEEEEEEC-CCHHHHHHHHHHHHHHHHH
Confidence 985 44678999999 8999999999999998875
No 5
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=3.1e-44 Score=323.34 Aligned_cols=312 Identities=21% Similarity=0.366 Sum_probs=262.3
Q ss_pred hhhhhhhhcCCCCCCCCc-EEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcccc
Q 019899 2 AGFMSQVLGQAVSFDPSQ-IVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~-i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
++|+.+..+ +.+++++ |++|+|+++++..++.+++++||+|++++|+|+++...++ ..|.+++.+|+++++++.+|
T Consensus 73 a~~~~~~~g--~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~-~~g~~~~~v~~~~~~~~~~d 149 (389)
T 1gd9_A 73 AEKLKKQNG--IEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVI-LAGGKPVEVPTYEEDEFRLN 149 (389)
T ss_dssp HHHHHHHHC--CCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHH-HHTCEEEEEECCGGGTTCCC
T ss_pred HHHHHHHhC--CCCCCCCeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHH-HCCCEEEEeccCCccCCCCC
Confidence 455555445 5567889 9999999999999999999999999999999999999888 88999999998644567899
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++ +++++++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+++....++..+..
T Consensus 150 ~~~l~~~l~~------~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--- 220 (389)
T 1gd9_A 150 VDELKKYVTD------KTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDG--- 220 (389)
T ss_dssp HHHHHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTT---
T ss_pred HHHHHHhcCc------CceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccC---
Confidence 9999999875 7899999999999999999999999999999999999999999998886653444544421
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
..++++++.|+||.+|++|+|+||+++ ++++++.+..... .++.+++.+.++..+++..+. ..++.+++++++++
T Consensus 221 -~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~ 297 (389)
T 1gd9_A 221 -MFERTITVNGFSKTFAMTGWRLGFVAA-PSWIIERMVKFQMYNATCPVTFIQYAAAKALKDERS-WKAVEEMRKEYDRR 297 (389)
T ss_dssp -CGGGEEEEEESTTTTTCGGGCCEEEEC-CHHHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHH-HHHHHHHHHHHHHH
T ss_pred -CCCCEEEEecChhhcCCcccceEEEEE-CHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCCc-chHHHHHHHHHHHH
Confidence 146789999999999989999999998 7888888876544 357788999999999887431 23678888999999
Q ss_pred HHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCccc
Q 019899 239 YDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHED 318 (334)
Q Consensus 239 ~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~ 318 (334)
++++.+.|++.|+++..+.+|+++|++++... .+..++...|++++||.+.||..|+...++++|++++ .++++
T Consensus 298 ~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~-~~~~~ 371 (389)
T 1gd9_A 298 RKLVWKRLNEMGLPTVKPKGAFYIFPRIRDTG-----LTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYA-TAYEK 371 (389)
T ss_dssp HHHHHHHHHHTTCCCCCCCBTTEECCBCGGGT-----CCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECC-SCHHH
T ss_pred HHHHHHHHHHcCCeecCCCeeeEEEEeccCCC-----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec-CCHHH
Confidence 99999999998988888888999999987411 1346788887757999999999887555789999999 58999
Q ss_pred HHHHHHHHHHHHHHcC
Q 019899 319 IPLVIERIQKVAETCK 334 (334)
Q Consensus 319 l~~~l~~l~~~~~~~~ 334 (334)
+++++++|++++++.+
T Consensus 372 i~~~l~~l~~~~~~~~ 387 (389)
T 1gd9_A 372 LEEAMDRMERVLKERK 387 (389)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcc
Confidence 9999999999998753
No 6
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=5.5e-44 Score=326.98 Aligned_cols=309 Identities=17% Similarity=0.319 Sum_probs=258.7
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccH
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
++|+.+..+ .. ++++|++|+|+++++..++.+++++||+|+++.|+|.++...++ ..|.+++.+|.++ ..+|+
T Consensus 128 a~~~~~~~g--~~-~~~~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~~~-~~g~~~~~v~~~~---~g~d~ 200 (448)
T 3aow_A 128 MKWLGKRYG--IS-QDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFN-FYEPQYIQIPLDD---EGMKV 200 (448)
T ss_dssp HHHHHHHHC--CC-TTSEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHH-TTCCEEEEEEEET---TEECH
T ss_pred HHHHHHhcC--cC-ChhhEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHH-HcCCEEEEeccCC---CCCCH
Confidence 445544444 44 78899999999999999999999999999999999999999998 8999999999743 24899
Q ss_pred HHHHHHHHHHHHcCCceeEE-EEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 82 TALDQAFNQARKRGVKVRGI-LICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i-~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++|+++++.....+.++++| ++++|+||||.++|.+++++|+++|++||++||+||+|+.+.+++....++..+..
T Consensus 201 ~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~--- 277 (448)
T 3aow_A 201 EILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDN--- 277 (448)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCT---
T ss_pred HHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCC---
Confidence 99999997321122378887 46889999999999999999999999999999999999999987765566666543
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
.++++++.||||.++ +|+|+||+++ ++++++.+..... .++.+++.|.++..+++... ..+++.++++.++++
T Consensus 278 --~~~vi~~~S~SK~~~-~GlriG~v~~-~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~-~~~~~~~~~~~~~~~ 352 (448)
T 3aow_A 278 --EGRVIYLGTFSKILA-PGFRIGWMVG-DPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGY-LEKHIPEIRKFYKPR 352 (448)
T ss_dssp --TSCEEEEEESTTTTC-GGGCCEEEEE-CHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTH-HHHHHHHHHHHHHHH
T ss_pred --CCCEEEEccchhhcc-ccccEEEEEe-CHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHH
Confidence 578999999999999 9999999999 7899888876543 35678999999999987653 366778889999999
Q ss_pred HHHHHHHHHhC---CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC--CCCeEEEEecC
Q 019899 239 YDSFVAGLKQL---GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI--EPGWFRCCFTS 313 (334)
Q Consensus 239 ~~~~~~~l~~~---g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~--~~~~iRi~~~~ 313 (334)
++++.+.|++. ++++..|.+|+++|++++... +..++...|++ +||.+.||..|+.. .++++|++++.
T Consensus 353 ~~~l~~~L~~~~~~g~~~~~p~~g~~~~v~~~~~~------~~~~l~~~l~~-~gV~v~pg~~f~~~~~~~~~iRls~~~ 425 (448)
T 3aow_A 353 RDAMLEALEEFMPEGVKWTKPEGGMFIWVTLPDGI------DSKKMLERAIK-KGVAYVPGEAFYAHRDVKNTMRLNFTY 425 (448)
T ss_dssp HHHHHHHHHHHCCTTCEECCCSBSSEEEEECSTTC------CHHHHHHHHHH-TTEECEEGGGGSTTCCCCSEEEEECSS
T ss_pred HHHHHHHHHHhCCCCeEEeCCCccEEEEEEcCCCC------CHHHHHHHHHH-CCcEEEcchhhcCCCCCCCEEEEEeCC
Confidence 99999999875 788888889999999998532 34678888666 59999999988653 35799999985
Q ss_pred CCcccHHHHHHHHHHHHHH
Q 019899 314 LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 314 ~~~~~l~~~l~~l~~~~~~ 332 (334)
.+++++++++++|.+++++
T Consensus 426 ~~~e~i~~~~~~L~~~l~~ 444 (448)
T 3aow_A 426 VDEDKIMEGIKRLAETIKE 444 (448)
T ss_dssp SCTHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 5899999999999999875
No 7
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=1.5e-44 Score=326.98 Aligned_cols=307 Identities=20% Similarity=0.327 Sum_probs=258.9
Q ss_pred hhhhhhhhcCCCCCCC-CcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcccc
Q 019899 2 AGFMSQVLGQAVSFDP-SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~-~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
++|+.+..+ ..+++ ++|++|+|+++++..++.+++++||+|+++.|+|+++...++ ..|.+++.+++++ +++.+|
T Consensus 95 a~~~~~~~g--~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~v~~~~-~~~~~d 170 (404)
T 2o1b_A 95 VDFYQRQYN--VTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVL-LADGKPVPLNLEP-PHYLPD 170 (404)
T ss_dssp HHHHHHHHC--CCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCSSHHHHHH-HTTCEEEEEECCT-TTCCCC
T ss_pred HHHHHHHhC--CCCCCcccEEEcCCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHH-HCCCEEEEeccCc-ccCcCC
Confidence 455555445 55565 799999999999999999999999999999999999999988 8999999999864 567789
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
+++|++++++ ++++|++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++ ...++..+...
T Consensus 171 ~~~l~~~l~~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~-- 241 (404)
T 2o1b_A 171 WSKVDSQIID------KTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDA-KNPSILASENG-- 241 (404)
T ss_dssp GGGSCHHHHH------HEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSS-CCCCGGGSTTH--
T ss_pred HHHHHHhhcc------CceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCChhhcCCC--
Confidence 9999999975 78999999999999999999999999999999999999999999988765 33344443210
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
.++++++.|+||.+|++|+|+||+++ ++++++.+..... .++.+++.+.++..+++.. ++++.+.+++++++
T Consensus 242 --~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~ 315 (404)
T 2o1b_A 242 --KDVAIEIYSLSKGYNMSGFRVGFAVG-NKDMIQALKKYQTHTNAGMFGALQDAAIYALNHY---DDFLEEQSNVFKTR 315 (404)
T ss_dssp --HHHEEEEEESTTTTTCGGGCCEEEEE-CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHH
T ss_pred --CCCEEEEEecchhccCchhheEeEec-CHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcC---HHHHHHHHHHHHHH
Confidence 36789999999999989999999998 8899888876544 3578889999888887542 45667888899999
Q ss_pred HHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCccc
Q 019899 239 YDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHED 318 (334)
Q Consensus 239 ~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~ 318 (334)
++++.+.|++.|+++..+.+|+++|++++... +..++...|++++||.+.||..|+...++++|++++ .++++
T Consensus 316 ~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~------~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~-~~~e~ 388 (404)
T 2o1b_A 316 RDRFEAMLAKADLPFVHAKGGIYVWLETPPGY------DSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLA-LDDQK 388 (404)
T ss_dssp HHHHHHHHHHTTCCEECCCBSSEEEEECCTTC------CHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECC-SCTTH
T ss_pred HHHHHHHHHhcCCeecCCCcceEEEEeCCCCC------CHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEc-CCHHH
Confidence 99999999988888888888999999997432 346788887777899999999887545689999999 58899
Q ss_pred HHHHHHHHHHHHHHcC
Q 019899 319 IPLVIERIQKVAETCK 334 (334)
Q Consensus 319 l~~~l~~l~~~~~~~~ 334 (334)
+++++++|++++++++
T Consensus 389 l~~~l~~l~~~l~~~~ 404 (404)
T 2o1b_A 389 LDEAAIRLTELAYLYE 404 (404)
T ss_dssp HHHHHHHHHGGGGGGC
T ss_pred HHHHHHHHHHHHHhhC
Confidence 9999999999988763
No 8
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.5e-44 Score=326.35 Aligned_cols=311 Identities=22% Similarity=0.350 Sum_probs=259.2
Q ss_pred hhhhhhhhcCCCCCCC-CcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcccc
Q 019899 2 AGFMSQVLGQAVSFDP-SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~-~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
++|+.+..+ ..+++ ++|++|+|+++++..++.+++++||+|+++.|+|+++...++ ..|.+++.+++++++++.+|
T Consensus 85 a~~~~~~~g--~~~~~~~~v~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~d 161 (412)
T 2x5d_A 85 SHWYRDRYD--VQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAV-IAGAQVRSVPLVPGIDFFNE 161 (412)
T ss_dssp HHHHHHHHC--CCCCTTTSEEEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHH-HHTCEEEEEECSTTSCHHHH
T ss_pred HHHHHHHhC--CCCCCCcCEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHH-HcCCEEEEeecCCccCCCCC
Confidence 455555445 55677 799999999999999999999999999999999999999988 88999999998654466688
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++ ++++|++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+++..+.++..+...
T Consensus 162 ~~~l~~~i~~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~-- 233 (412)
T 2x5d_A 162 LERAIRESIP------KPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGA-- 233 (412)
T ss_dssp HHHHHHTEES------CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTG--
T ss_pred HHHHHHhccc------CceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCc--
Confidence 9999988864 78999999999999999999999999999999999999999999998866555555544210
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
.++++++.|+||.+|++|+|+||+++ ++++++.+..... .++.+++.+.++..+++.. ++++.+.+++++++
T Consensus 234 --~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~ 307 (412)
T 2x5d_A 234 --KDIAVEFFTLSKSYNMAGWRIGFMVG-NPELVSALARIKSYHDYGTFTPLQVAAIAALEGD---QQCVRDIARQYQQR 307 (412)
T ss_dssp --GGTEEEEEECC-CCSCTTSCCEEEEE-CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHSC---SHHHHHHHHHHHHH
T ss_pred --cCcEEEEecCccccCCcccceEEEEc-CHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCC---HHHHHHHHHHHHHH
Confidence 46789999999999989999999998 8899888876544 4678899999988888653 24567788889999
Q ss_pred HHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCccc
Q 019899 239 YDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHED 318 (334)
Q Consensus 239 ~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~ 318 (334)
++++.+.|++.|+++..+.+|+++|++++.... ..+..++...|++++||.+.||..|+...++++|++++ .++++
T Consensus 308 ~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~-~~~~~ 383 (412)
T 2x5d_A 308 RDVLVKGLREAGWMVENPKASMYVWAKIPEPYA---HLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALI-ENRDR 383 (412)
T ss_dssp HHHHHHHHHHHTCCCCCCSBSSEEEEECCTTTG---GGCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC-SCHHH
T ss_pred HHHHHHHHHHCCCEecCCCeeeEEEEEcCCccC---CCCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEec-CCHHH
Confidence 999999999888888888889999999975321 01346788887777899999999887555789999999 48899
Q ss_pred HHHHHHHHHHHHHHc
Q 019899 319 IPLVIERIQKVAETC 333 (334)
Q Consensus 319 l~~~l~~l~~~~~~~ 333 (334)
+++++++|++++++.
T Consensus 384 l~~~l~~l~~~l~~~ 398 (412)
T 2x5d_A 384 LRQAVRGIKAMFRAD 398 (412)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999998764
No 9
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=100.00 E-value=1.2e-43 Score=323.02 Aligned_cols=313 Identities=16% Similarity=0.234 Sum_probs=255.1
Q ss_pred hhhhhhhhcCCCCCC-------CCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCC
Q 019899 2 AGFMSQVLGQAVSFD-------PSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRST 74 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~-------~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~ 74 (334)
++|+.+..+ ...+ +++|++|+|+++++..++.+++++||+|++++|+|+++...++ ..|.+++.+++++
T Consensus 88 a~~l~~~~g--~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-~~g~~~~~v~~~~- 163 (425)
T 2r2n_A 88 KQLQIKLHN--PPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLH-PLGCNIINVASDE- 163 (425)
T ss_dssp HHHHHHHHC--CTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHG-GGTCEEEEECEET-
T ss_pred HHHHHHhcC--CCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHH-HcCCEEEEeCcCC-
Confidence 566666555 4442 3699999999999999999999999999999999999999998 8999999999742
Q ss_pred CCccccHHHHHHHHHHHH------HcCCceeEEEE-eCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCC
Q 019899 75 DNFAFSITALDQAFNQAR------KRGVKVRGILI-CNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNE 147 (334)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~------~~~~~~~~i~~-~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~ 147 (334)
..+|+++|++++++.. ....++++|++ .+|+||||.++|.+++++|+++|++||++||+||+|+++.|++.
T Consensus 164 --~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~~~~~g~ 241 (425)
T 2r2n_A 164 --SGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKF 241 (425)
T ss_dssp --TEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSS
T ss_pred --CCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCcccccCCCC
Confidence 3589999999986310 00125787766 58899999999999999999999999999999999999988776
Q ss_pred CcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCCh--HH
Q 019899 148 EFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDT--KF 223 (334)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~--~~ 223 (334)
...++..+.. .++++++.|+||+++ +|+|+||+++ ++++++.+..... .++.+++.|.++..+++.. +.
T Consensus 242 ~~~~~~~~~~-----~~~~i~~~s~SK~~~-~GlRiG~~~~-~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~ 314 (425)
T 2r2n_A 242 RVPTFLSMDV-----DGRVIRADSFSKIIS-SGLRIGFLTG-PKPLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEG 314 (425)
T ss_dssp CCCCTGGGCT-----TSCEEEEEESTTTTC-STTCCEEEEE-EHHHHHHHHHHHHTTTCSSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCccccCC-----CCCEEEEccchhhcc-CccceEEEec-CHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcccch
Confidence 6666666543 578999999999998 9999999998 7788888876543 4678999999999888752 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC--CC-cccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcC
Q 019899 224 IQEYLETNKRRIKKLYDSFVAGLKQL--GI-RCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACH 300 (334)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~l~~~--g~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~ 300 (334)
..+++.+++++++++++.+.+.|++. ++ .+..+.+|+++|++++...+ ..+++...+.++||.+.||..|+
T Consensus 315 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~~~~------~~~~~~~~l~~~gv~v~pg~~f~ 388 (425)
T 2r2n_A 315 FMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGIND------VKELIEEKAVKMGVLMLPGNAFY 388 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETTCSC------CHHHHHTHHHHTTEECEEGGGGS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCCCCC------HHHHHHHHHHHCCcEEechhhhc
Confidence 35677888999999999999999885 66 45678899999999986432 24543334667999999999887
Q ss_pred CC---CCCeEEEEecCCCcccHHHHHHHHHHHHHHc
Q 019899 301 CI---EPGWFRCCFTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 301 ~~---~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
.. ..+++|++++..+++++++++++|++++++.
T Consensus 389 ~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~ 424 (425)
T 2r2n_A 389 VDSSAPSPYLRASFSSASPEQMDVAFQVLAQLIKES 424 (425)
T ss_dssp SSTTSCCCEEEEECSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence 54 2579999998669999999999999998763
No 10
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=6.3e-44 Score=320.51 Aligned_cols=308 Identities=19% Similarity=0.295 Sum_probs=262.6
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCC-CCcccc
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRST-DNFAFS 80 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~-~~~~~~ 80 (334)
++++.+.++ ..+++++|++|+|+++++..++.+++++||+|+++.|+|.++...++ ..|.+++.++++++ +++.+|
T Consensus 69 ~~~l~~~~g--~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~d 145 (383)
T 3kax_A 69 CNWTKKQYN--WDIQKEWIVFSAGIVPALSTSIQAFTKENESVLVQPPIYPPFFEMVT-TNNRQLCVSPLQKQNDTYAID 145 (383)
T ss_dssp HHHHHHHHC--CCCCGGGEEEESCHHHHHHHHHHHHCCTTCEEEECSSCCHHHHHHHH-HTTCEEEECCCEEETTEEECC
T ss_pred HHHHHHHhC--CCCChhhEEEcCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHH-HcCCEEEeccceecCCcEEEc
Confidence 556666655 55788999999999999999999999999999999999999999998 89999999998532 346799
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++ +++++++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+++....++..+..+
T Consensus 146 ~~~l~~~l~~------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~-- 217 (383)
T 3kax_A 146 FEHLEKQFQQ------GVKLMLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEE-- 217 (383)
T ss_dssp HHHHHHHHTT------TCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHH--
T ss_pred HHHHHHHhCc------CCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCcc--
Confidence 9999999954 88999999999999999999999999999999999999999999999877666666555321
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc---cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF---CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
. .++++++.|+||.+|++|+|+||++++++++.+.++..... ++.+++.+.++..++... .+++.++++++++
T Consensus 218 ~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~ 293 (383)
T 3kax_A 218 L-AARTITCMAPSKTFNIAGLQASIIIIPNEKLRQAFTSIQYRQGFHGLNIFAYTAMQSAYTEC---NDWLNEIRFYIED 293 (383)
T ss_dssp H-HTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHTTTC---HHHHHHHHHHHHH
T ss_pred c-cCcEEEEEEChhhccCcchhheEEEeCCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHhh---HHHHHHHHHHHHH
Confidence 0 37889999999999999999999998678888888765433 477889999988888763 4556778889999
Q ss_pred HHHHHHHHHHhC--CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCC
Q 019899 238 LYDSFVAGLKQL--GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLT 315 (334)
Q Consensus 238 ~~~~~~~~l~~~--g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~ 315 (334)
+++++.+.|++. ++++..+.+++++|++++... .+..++...|++++||.+.||..|+...++++|++++ .+
T Consensus 294 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~-~~ 367 (383)
T 3kax_A 294 NAKFACEYIKDHIPTLSVMKPEGSFLLWIDCSALN-----LSQDERTKLLEEKGKIIVEPGEKYGLGGEEHIGINIG-CP 367 (383)
T ss_dssp HHHHHHHHHHHHCTTCEECCCSBSSEEEEECGGGC-----CCHHHHHHHHHHTSCEECEESGGGCTTCTTEEEEECS-SC
T ss_pred HHHHHHHHHHhhCCCceEecCCceEEEEEEccccC-----CCHHHHHHHHHhhCCEEeECchhhcCCCCCeEEEEEc-CC
Confidence 999999999885 888888999999999987631 1346888887767999999999998766799999999 68
Q ss_pred cccHHHHHHHHHHHH
Q 019899 316 HEDIPLVIERIQKVA 330 (334)
Q Consensus 316 ~~~l~~~l~~l~~~~ 330 (334)
++++++++++|++++
T Consensus 368 ~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 368 RSVLEEILNRLRHTF 382 (383)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 899999999999876
No 11
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=4e-43 Score=324.84 Aligned_cols=328 Identities=20% Similarity=0.306 Sum_probs=263.7
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCC----eEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCc
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGN----ALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNF 77 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd----~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~ 77 (334)
++|+.++.+ ++.+++++|++|+|+++++..++.+++++|| .|+++.|+|+.+...++ ..|.+++.++++++++|
T Consensus 139 a~~~~~~~g-G~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~~~~~-~~g~~~v~~~~~~~~~~ 216 (498)
T 3ihj_A 139 AAYITRRDG-GVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVIS-ELDAIQVNYYLDEENCW 216 (498)
T ss_dssp HHHHHHHTT-TCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHHHHHH-HTTCEEEEEECBGGGTT
T ss_pred HHHHHHhcC-CCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHHHHHH-HcCCEEEEeeccccccC
Confidence 556655441 2667899999999999999999999998875 99999999999999998 89999999999877788
Q ss_pred cccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCC-Ccchhhhhh
Q 019899 78 AFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNE-EFVSMAEIL 156 (334)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~ 156 (334)
.+|+++|++++++.... .++++|++++|+||||.++|.+++++|+++|++|+++||+||+|+.+.|++. .+.++..+.
T Consensus 217 ~~d~~~le~~l~~~~~~-~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~ 295 (498)
T 3ihj_A 217 ALNVNELRRAVQEAKDH-CDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVL 295 (498)
T ss_dssp BCCHHHHHHHHHHHTTT-SEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHH
T ss_pred CCCHHHHHHHHHhhhcc-CCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHH
Confidence 99999999999874221 2589999999999999999999999999999999999999999999998754 566666654
Q ss_pred hccc--c-CCCcEEEEecccccC-CCCCceEEEEee--cCHHHHHHHHHhhcc-cCCChHHHHHHHHhhCC-----h--H
Q 019899 157 EAEE--V-DKDRVHIIYGLSKDL-SLPGFRTGVIYS--YNESVLAAAKKLTRF-CSISAPTQRLLISMLSD-----T--K 222 (334)
Q Consensus 157 ~~~~--~-~~~~~~~~~s~sK~~-~~~g~r~g~i~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~-----~--~ 222 (334)
.+.. + +..++++++|+||.+ |++|+|+||++. .++++++.+...... .+.+.+.|.++..++.. . +
T Consensus 296 ~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~~~~~~~~~~~~~q~a~~~~l~~~~~g~~~~~ 375 (498)
T 3ihj_A 296 YEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSVRLCPPVSGQAAMDIVVNPPVAGEESFE 375 (498)
T ss_dssp HHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHHHHHHHHHSCCCCHHHHHHHHHHTCCCCTTSTTHH
T ss_pred HHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCCccCcccHH
Confidence 3100 0 134578999999999 889999999983 488999988766443 56788999998888864 1 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCceeEEeeecCCcCCC-----CChhhHHHH-HHHHHHhcCeEEcC
Q 019899 223 FIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSESSAGLYCWADMSGLIPS-----YSEKGELEL-WDKLLNIAKINVTP 295 (334)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~-----~~~~~~~~~-~~~ll~~~gi~v~~ 295 (334)
...+...+++++++++++.+.+.|+++ |+++..+.+++++|++++.+... ....+..++ +..+++++||.+.|
T Consensus 376 ~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~p~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~p 455 (498)
T 3ihj_A 376 QFSREKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVP 455 (498)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEecCCCeEEEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEe
Confidence 112334677889999999999999998 89999999999999876422100 000122333 67778889999999
Q ss_pred CCCcCC-CCCCeEEEEecCCCcccHHHHHHHHHHHHHHc
Q 019899 296 GSACHC-IEPGWFRCCFTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 296 g~~~~~-~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
|+.|+. ..++++|++++ .+++++++++++|+++++++
T Consensus 456 G~~f~~~~~~~~~Ris~~-~~~e~l~~~i~~L~~~~~~~ 493 (498)
T 3ihj_A 456 GSGFGQREGTYHFRMTIL-PPVEKLKTVLQKVKDFHINF 493 (498)
T ss_dssp GGGTCCCTTCCBEEEECC-SCHHHHHHHHHHHHHHHHHH
T ss_pred CcccCCCCCCCEEEEEeC-CCHHHHHHHHHHHHHHHHHH
Confidence 999985 34679999997 88999999999999998764
No 12
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=5.9e-44 Score=321.55 Aligned_cols=313 Identities=17% Similarity=0.253 Sum_probs=266.0
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCC-CCCCcccc
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCR-STDNFAFS 80 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~-~~~~~~~~ 80 (334)
++++.+.++ +++++++|++|+|+++++..++.+++++||+|+++.|+|.++...++ ..|.+++.+|++ .++.+.+|
T Consensus 72 a~~l~~~~g--~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~d 148 (391)
T 3dzz_A 72 ADWEEIEHR--ARPKEDWCVFASGVVPAISAMVRQFTSPGDQILVQEPVYNMFYSVIE-GNGRRVISSDLIYENSKYSVN 148 (391)
T ss_dssp HHHHHHHHS--CCCCGGGEEEESCHHHHHHHHHHHHSCTTCEEEECSSCCHHHHHHHH-HTTCEEEECCCEEETTEEECC
T ss_pred HHHHHHHhC--CCCCHHHEEECCCHHHHHHHHHHHhCCCCCeEEECCCCcHHHHHHHH-HcCCEEEEeeeeecCCceeec
Confidence 566666666 56788999999999999999999999999999999999999999998 899999999984 34556699
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++ .++++|++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+.+..+.++..+...
T Consensus 149 ~~~l~~~l~~-----~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~-- 221 (391)
T 3dzz_A 149 WADLEEKLAT-----PSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWD-- 221 (391)
T ss_dssp HHHHHHHHTS-----TTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTT--
T ss_pred HHHHHHHHhc-----cCceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCcc--
Confidence 9999999973 289999999999999999999999999999999999999999999998877666666655421
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh---cccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT---RFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
..++++++.|+||.+|++|+|+||++++++++.+.++... ..++.+++.+.++..++... .+++.+.++++++
T Consensus 222 -~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~ 297 (391)
T 3dzz_A 222 -AKNWVVSLISPSKTFNLAALHAACAIIPNPDLRARAEESFFLAGIGEPNLLAIPAAIAAYEEG---HDWLRELKQVLRD 297 (391)
T ss_dssp -TGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHHC---HHHHHHHHHHHHH
T ss_pred -ccCcEEEEEeChhhccccchhheEEEECCHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcc---HHHHHHHHHHHHH
Confidence 0457899999999999999999999995699988887653 34578888888888777542 4556788889999
Q ss_pred HHHHHHHHHHhC--CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCC
Q 019899 238 LYDSFVAGLKQL--GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLT 315 (334)
Q Consensus 238 ~~~~~~~~l~~~--g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~ 315 (334)
+++++.+.|++. ++++..+.+++++|++++... .+..++...|++++||.+.||..|+...++++|++++ .+
T Consensus 298 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~-~~ 371 (391)
T 3dzz_A 298 NFAYAREFLAKEVPEVKVLDSNASYLAWVDISALG-----MNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLA-CP 371 (391)
T ss_dssp HHHHHHHHHHHHCTTSEECCCCBSSEEEEECGGGC-----SCHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECC-SC
T ss_pred HHHHHHHHHHhhCCCcEEeccCceEEEEEehhhcC-----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec-CC
Confidence 999999999984 899888999999999987531 1346888887667999999999988766789999999 78
Q ss_pred cccHHHHHHHHHHHHHHcC
Q 019899 316 HEDIPLVIERIQKVAETCK 334 (334)
Q Consensus 316 ~~~l~~~l~~l~~~~~~~~ 334 (334)
++++++++++|++++++++
T Consensus 372 ~~~i~~~l~~l~~~l~~~~ 390 (391)
T 3dzz_A 372 KELVIDGMQRLKQGVLNLN 390 (391)
T ss_dssp HHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 9999999999999998754
No 13
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=6e-44 Score=320.02 Aligned_cols=304 Identities=20% Similarity=0.257 Sum_probs=261.9
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccH
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
++++.+..+ +.+++++|++|+|+++++..++.+++++||+|+++.|+|.++...++ ..|.+++.+|+++ + +|+
T Consensus 68 a~~~~~~~~--~~~~~~~i~~t~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~-~~g~~~~~~~~~~--~--~d~ 140 (377)
T 3fdb_A 68 AEFYADRYG--YQARPEWIFPIPDVVRGLYIAIDHFTPAQSKVIVPTPAYPPFFHLLS-ATQREGIFIDATG--G--INL 140 (377)
T ss_dssp HHHHHHHHC--CCCCGGGEEEESCHHHHHHHHHHHHSCTTCCEEEEESCCTHHHHHHH-HHTCCEEEEECTT--S--CCH
T ss_pred HHHHHHHhC--CCCCHHHEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcHhHHHHHH-HcCCEEEEccCCC--C--CCH
Confidence 566666666 56788999999999999999999999999999999999999999988 8999999999843 2 999
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCC-CCcchhhhhhhccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGN-EEFVSMAEILEAEE 160 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~-~~~~~~~~~~~~~~ 160 (334)
+++++++++ +++++++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+++ ....++..+..
T Consensus 141 ~~l~~~l~~------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~--- 211 (377)
T 3fdb_A 141 HDVEKGFQA------GARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTA--- 211 (377)
T ss_dssp HHHHHHHHT------TCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHH---
T ss_pred HHHHHHhcc------CCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccC---
Confidence 999999986 68899999999999999999999999999999999999999999998877 55556655543
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
.++++++.|+||.+|++|+|+||+++.++++.+.+..... .++.+++.+.++..++... ++++.+++++++++
T Consensus 212 --~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~ 286 (377)
T 3fdb_A 212 --ASVCITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQLSPVIKDGASTLGLIAAEAAYRYG---TDFLNQEVAYLKNN 286 (377)
T ss_dssp --HHHEEEEECSTTTTTCGGGCCEEEECCSHHHHHHHHHSCHHHHCCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHH
T ss_pred --CCcEEEEEeChHhccCcchhheEEEeCCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhcc---HHHHHHHHHHHHHH
Confidence 5778999999999998999999988768899888877543 3578889998888887643 45567888899999
Q ss_pred HHHHHHHHHhC--CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCc
Q 019899 239 YDSFVAGLKQL--GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTH 316 (334)
Q Consensus 239 ~~~~~~~l~~~--g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~ 316 (334)
++++.+.|++. ++++..+.+++++|++++..... .++...+++++||.+.||..|+...++++|++++ .++
T Consensus 287 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~-~~~ 359 (377)
T 3fdb_A 287 HDFLLHEIPKRIPGAKITPMQATYLMWIDFRDTTIE------GSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFA-TSR 359 (377)
T ss_dssp HHHHHHHHHHHSTTCEECCCSBCSEEEEECTTSCCC------SCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC-SCH
T ss_pred HHHHHHHHHhhCCCceEecCCeeEEEEEECcccCCC------HHHHHHHHHhCCEEecCChhccCCCCCEEEEEeC-CCH
Confidence 99999999985 89998999999999999864211 3677887887899999999988766789999999 689
Q ss_pred ccHHHHHHHHHHHHHHc
Q 019899 317 EDIPLVIERIQKVAETC 333 (334)
Q Consensus 317 ~~l~~~l~~l~~~~~~~ 333 (334)
+++++++++|+++++++
T Consensus 360 e~i~~~l~~l~~~l~~~ 376 (377)
T 3fdb_A 360 EVLEEAIDRMAKAVSHH 376 (377)
T ss_dssp HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhhc
Confidence 99999999999998764
No 14
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-44 Score=328.68 Aligned_cols=311 Identities=18% Similarity=0.328 Sum_probs=257.2
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCC------
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTD------ 75 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~------ 75 (334)
++++.+.++ .++++++|++|+|+++++..++.+++++||+|++++|+|+++...++ ..|.+++.+++.+++
T Consensus 105 a~~l~~~~g--~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~~~ 181 (447)
T 3b46_A 105 IKLYSPIYN--TELKAENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIE-LCGGKVVYVPINPPKELDQRN 181 (447)
T ss_dssp HHHHTTTTT--SCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHH-HTTCEEEEEEEECCGGGGTSC
T ss_pred HHHHHHhcC--CCCChhhEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhHHHHHH-HcCCEEEEEeCCCcccccccc
Confidence 455554444 45677899999999999999999999999999999999999999988 899999999975432
Q ss_pred ----CccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcch
Q 019899 76 ----NFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVS 151 (334)
Q Consensus 76 ----~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~ 151 (334)
++.+|+++|++++++ ++++|++++|+||||.+++.+++++|+++|++||++||+||+|+.+.+++ ...+
T Consensus 182 ~~~~~~~~d~~~l~~~l~~------~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g-~~~~ 254 (447)
T 3b46_A 182 TRGEEWTIDFEQFEKAITS------KTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTD-SFTR 254 (447)
T ss_dssp BCSTTSEECHHHHHTTCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS-CCCC
T ss_pred ccccCcccCHHHHHHhhcc------CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCC-CCcC
Confidence 578999999998874 78999999999999999999999999999999999999999999998876 3334
Q ss_pred hhhh-hhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh--cccCCChHHHHHHHHhhCChHHHHHHH
Q 019899 152 MAEI-LEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT--RFCSISAPTQRLLISMLSDTKFIQEYL 228 (334)
Q Consensus 152 ~~~~-~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~ 228 (334)
+..+ ... .++++++.|+||.++++|+|+||+++.++++++.+.... ..++.+++.|.++..+++... .++++
T Consensus 255 ~~~~~~~~----~~~~i~i~S~sK~~~~~G~riG~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~-~~~~~ 329 (447)
T 3b46_A 255 IATLSPEI----GQLTLTVGSAGKSFAATGWRIGWVLSLNAELLSYAAKAHTRICFASPSPLQEACANSINDAL-KIGYF 329 (447)
T ss_dssp GGGSCHHH----HTTEEEEEEHHHHTTCTTSCCEEEECSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHH-HHTHH
T ss_pred HHHcCCCC----CCcEEEEecCchhcCCcchhhEEEEeCCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCCc-chHHH
Confidence 4443 111 578999999999999999999999985778888887643 456788999998888886532 24567
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCC---------ChhhHHHHHHHHHHhcCeEEcCCCCc
Q 019899 229 ETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSY---------SEKGELELWDKLLNIAKINVTPGSAC 299 (334)
Q Consensus 229 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~---------~~~~~~~~~~~ll~~~gi~v~~g~~~ 299 (334)
.+++++++++++++.+.|+++|+++..+.+|+++|++++...... ...+..+++.+|++++||.+.||..|
T Consensus 330 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f 409 (447)
T 3b46_A 330 EKMRQEYINKFKIFTSIFDELGLPYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEF 409 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCEECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHh
Confidence 888999999999999999998998888889999999997531000 01245678888887899999999888
Q ss_pred CCC-----CCCeEEEEecCCCcccHHHHHHHHHH
Q 019899 300 HCI-----EPGWFRCCFTSLTHEDIPLVIERIQK 328 (334)
Q Consensus 300 ~~~-----~~~~iRi~~~~~~~~~l~~~l~~l~~ 328 (334)
+.. .++++|++++ .+++++++++++|++
T Consensus 410 ~~~~~~~~~~~~iRls~~-~~~e~l~~~~~~l~~ 442 (447)
T 3b46_A 410 YIKEHEKAAENLLRFAVC-KDDAYLENAVERLKL 442 (447)
T ss_dssp SCGGGGGGGTTEEEEECC-SCHHHHHHHHHHGGG
T ss_pred CCCCccCCCCCEEEEEEe-CCHHHHHHHHHHHHH
Confidence 643 2579999999 689999999999987
No 15
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=5.7e-44 Score=325.35 Aligned_cols=304 Identities=21% Similarity=0.375 Sum_probs=259.8
Q ss_pred CCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHH
Q 019899 13 VSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQAR 92 (334)
Q Consensus 13 ~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~ 92 (334)
..+++++|++|+|+++|+..++..++++||+|++++|+|.++...++ ..|.+++.+++.+++++.+|++++++++++
T Consensus 114 ~~~~~~~v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-- 190 (427)
T 3dyd_A 114 APLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAE-SMGIEVKLYNLLPEKSWEIDLKQLEYLIDE-- 190 (427)
T ss_dssp BCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHH-HTTCEEEEEEEEGGGTTEECHHHHHSSCCT--
T ss_pred CCCChHHEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHH-HcCCEEEEEecccccCCCCCHHHHHHHhcc--
Confidence 44778999999999999999999999999999999999999999998 899999999986667788999999998875
Q ss_pred HcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEecc
Q 019899 93 KRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGL 172 (334)
Q Consensus 93 ~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 172 (334)
+++++++++|+||||.++|.+++++|+++|+++|+++|+|++|+.+.+++..+.++..+.. ...++++.|+
T Consensus 191 ----~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~-----~~~vi~~~S~ 261 (427)
T 3dyd_A 191 ----KTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLST-----DVPILSCGGL 261 (427)
T ss_dssp ----TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCS-----SCCEEEEEES
T ss_pred ----CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCC-----CCcEEEEeec
Confidence 7899999999999999999999999999999999999999999999988776666666654 5668899999
Q ss_pred cccCCCCCceEEEEeecC------HHHHHHHHHhh-cccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHH
Q 019899 173 SKDLSLPGFRTGVIYSYN------ESVLAAAKKLT-RFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAG 245 (334)
Q Consensus 173 sK~~~~~g~r~g~i~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (334)
||.++++|+|+||+++++ +++.+.+.... ..++.+++.+.++..++.... .+++.+++++++++++++.+.
T Consensus 262 sK~~~~~G~riG~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~a~~~~L~~~~--~~~~~~~~~~~~~~~~~l~~~ 339 (427)
T 3dyd_A 262 AKRWLVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQRILGPCTIVQGALKSILCRTP--GEFYHNTLSFLKSNADLCYGA 339 (427)
T ss_dssp TTTSSCGGGCCEEEEEECSTTSSHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHSC--HHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCcCcceEEEEecCcchhhHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHH
Confidence 999988999999999855 56777776553 357889999999999887322 345677888899999999999
Q ss_pred HHhC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHHH
Q 019899 246 LKQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIE 324 (334)
Q Consensus 246 l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l~ 324 (334)
|+++ |+++..+.+++++|++++..... ...+..+++..|++++||.+.||..|+. ++++|++++ .++++++++++
T Consensus 340 L~~~~g~~~~~p~~g~~~~~~l~~~~~~-~~~~~~~~~~~l~~~~gV~v~~g~~~~~--~~~iRis~~-~~~e~i~~~l~ 415 (427)
T 3dyd_A 340 LAAIPGLRPVRPSGAMYLMVGIEMEHFP-EFENDVEFTERLVAEQSVHCLPATCFEY--PNFIRVVIT-VPEVMMLEACS 415 (427)
T ss_dssp HHHSTTEEEECCSBTTEEEEEECGGGCT-TCSSHHHHHHHHHHHHCEECEEGGGGTC--TTEEEEESC-SCHHHHHHHHH
T ss_pred HhcCCCceecCCCeeEEEEEecCHhhcC-CCCCHHHHHHHHHHHCCEEEECCcccCC--CCeEEEEEC-CCHHHHHHHHH
Confidence 9998 88888888999999988732110 0123468888988789999999998864 689999998 89999999999
Q ss_pred HHHHHHHHcC
Q 019899 325 RIQKVAETCK 334 (334)
Q Consensus 325 ~l~~~~~~~~ 334 (334)
+|.+++++++
T Consensus 416 ~l~~~l~~~~ 425 (427)
T 3dyd_A 416 RIQEFCEQHY 425 (427)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhh
Confidence 9999998764
No 16
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=2e-43 Score=319.75 Aligned_cols=311 Identities=23% Similarity=0.350 Sum_probs=261.7
Q ss_pred hhhhhhhhcCCCCCCC-CcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCC----CCC
Q 019899 2 AGFMSQVLGQAVSFDP-SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRS----TDN 76 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~-~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~----~~~ 76 (334)
++++.+.++ ..+++ ++|++|+|+++++..++.+++++||+|+++.|+|.++...++ ..|.+++.++..+ +++
T Consensus 88 ~~~l~~~~g--~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~ 164 (407)
T 3nra_A 88 APRLAAFTG--APVDARDGLIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVE-FFEGEMVPVQLDYVSADETR 164 (407)
T ss_dssp HHHHHHHHT--SCCCTTTSEEEESHHHHHHHHHHHTTCCTTCEEEEEESCCTHHHHHHH-HTTCEEEEEEBCCCSSCCSS
T ss_pred HHHHHHHhC--CCCCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEcCCcccchHHHHH-HcCCEEEEeecccccccCcC
Confidence 456666555 45555 799999999999999999999999999999999999999998 8999999999742 366
Q ss_pred ccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhh
Q 019899 77 FAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEIL 156 (334)
Q Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~ 156 (334)
+.+|++++++++++ +++++++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+++....++..+.
T Consensus 165 ~~~d~~~l~~~l~~------~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~ 238 (407)
T 3nra_A 165 AGLDLTGLEEAFKA------GARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEA 238 (407)
T ss_dssp CCBCHHHHHHHHHT------TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCT
T ss_pred CCcCHHHHHHHHhh------CCcEEEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcC
Confidence 78999999999986 789999999999999999999999999999999999999999999998876666666553
Q ss_pred hccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc--cCCChHHHHHHHHhhCChHHHHHHHHHHHHH
Q 019899 157 EAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--CSISAPTQRLLISMLSDTKFIQEYLETNKRR 234 (334)
Q Consensus 157 ~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 234 (334)
. ...++++++.|+||.+|++|+|+||+++ ++++++.++..... ++.+++.+.++..++... .+++.+.+++
T Consensus 239 ~---~~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~ 311 (407)
T 3nra_A 239 A---VDAENVVTIMGPSKTESLSGYRLGVAFG-SRAIIARMEKLQAIVSLRAAGYSQAVLRGWFDEA---PGWMEDRIAR 311 (407)
T ss_dssp T---SCGGGEEEEECSSSTTCCGGGCCEEEEE-CHHHHHHHHHHHHHHTSSSCHHHHGGGGGTTCCC---TTHHHHHHHH
T ss_pred c---ccCCcEEEEeCcccccCCCeeeEEEEEc-CHHHHHHHHHHHhhhccCCChHHHHHHHHHHhcc---chHHHHHHHH
Confidence 0 1267889999999999999999999998 88998888765443 456778888877777643 2334566777
Q ss_pred HHHHHHHHHHHHHhC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC
Q 019899 235 IKKLYDSFVAGLKQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS 313 (334)
Q Consensus 235 ~~~~~~~~~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~ 313 (334)
++++++++.+.|+++ ++++..+.+++++|++++... .+..++...|++++||.+.||..|++..++++|++++
T Consensus 312 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~- 385 (407)
T 3nra_A 312 HQAIRDELLHVLRGCEGVFARTPQAGSYLFPRLPKLA-----VAPAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFS- 385 (407)
T ss_dssp HHHHHHHHHHHHHTSTTCBCCCCSBSSEECCBCCCBS-----SCHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECC-
T ss_pred HHHHHHHHHHHHhcCCCceeccCCeeEEEEEeCCCCC-----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeC-
Confidence 888999999999988 888888888899999987631 1346788887777899999999998767899999999
Q ss_pred CCcccHHHHHHHHHHHHHHcC
Q 019899 314 LTHEDIPLVIERIQKVAETCK 334 (334)
Q Consensus 314 ~~~~~l~~~l~~l~~~~~~~~ 334 (334)
.+++++++++++|++++++++
T Consensus 386 ~~~~~i~~~~~~l~~~~~~~~ 406 (407)
T 3nra_A 386 QDHEAAVAAARRIVTLVERYR 406 (407)
T ss_dssp SCHHHHHHHHHHHHHHHHHHB
T ss_pred CCHHHHHHHHHHHHHHHHHhh
Confidence 599999999999999998753
No 17
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=3.7e-43 Score=316.99 Aligned_cols=305 Identities=19% Similarity=0.323 Sum_probs=254.3
Q ss_pred hhhhhhhhcCCCC-CCCC-cEEEecCcHHHHHHHHHHhcCCC-----CeEEecCCCCCChhhhhhhccCcEEEEEeCCCC
Q 019899 2 AGFMSQVLGQAVS-FDPS-QIVLTAGATPAVEILCFCLADHG-----NALLVPSPYYPGFDRDIRFRTGVELIPVHCRST 74 (334)
Q Consensus 2 ~~~~~~~~~~~~~-~~~~-~i~~~~g~~~~~~~~~~~l~~~g-----d~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~ 74 (334)
++|+.+.++ +. ++++ +|++|+|+++++..++.+++++| |+|+++.|+|.++...++ ..|.+++.+++ ++
T Consensus 76 a~~l~~~~g--~~~~~~~~~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~-~~g~~~~~v~~-~~ 151 (396)
T 3jtx_A 76 ANWLKRRYD--GLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATL-LGGGEIHFANC-PA 151 (396)
T ss_dssp HHHHHHHTT--TCCCCTTTSEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHHHHH-HTTCEEEEEEC-CT
T ss_pred HHHHHHhcC--CCCCCCCCeEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHHHH-HcCCEEEEeec-CC
Confidence 456665545 44 6788 99999999999999999999886 799999999999999888 89999999998 45
Q ss_pred CCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhh
Q 019899 75 DNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAE 154 (334)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~ 154 (334)
+++.+|++++++++++ +++++++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+++..+.+...
T Consensus 152 ~g~~~d~~~l~~~~~~------~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~ 225 (396)
T 3jtx_A 152 PSFNPDWRSISEEVWK------RTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQ 225 (396)
T ss_dssp TTCCCCGGGSCHHHHH------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHH
T ss_pred CCCccCHHHHHHhhcc------CcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHh
Confidence 6778899999999987 8999999999999999999999999999999999999999999999887643333332
Q ss_pred hhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCChHHHHHHHHHHH
Q 019899 155 ILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDTKFIQEYLETNK 232 (334)
Q Consensus 155 ~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 232 (334)
.......+.++++++.|+||.++++|+|+||+++ ++++++.+..... .++.+++.+.++..++... +++.+.+
T Consensus 226 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~ 300 (396)
T 3jtx_A 226 AAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAG-DAELLKNFLLYRTYHGSAMSIPVQRASIAAWDDE----QHVIDNR 300 (396)
T ss_dssp HHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEE-CHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHCC----HHHHHHH
T ss_pred hhhhcccccCcEEEEeccccccCCcccceEEEEe-CHHHHHHHHHHHhhcccCCCHHHHHHHHHHhCCH----HHHHHHH
Confidence 2110011268899999999999889999999998 8899888876544 3578899999988888753 3457778
Q ss_pred HHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCC------CCCCe
Q 019899 233 RRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHC------IEPGW 306 (334)
Q Consensus 233 ~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~------~~~~~ 306 (334)
++++++++.+.+.|++. +.+..+.+|+++|++++.. +..++...|++++||.+.||..|+. ..+++
T Consensus 301 ~~~~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~ 372 (396)
T 3jtx_A 301 RLYQEKFERVIPILQQV-FDVKLPDASFYIWLKVPDG-------DDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGY 372 (396)
T ss_dssp HHHHHHHHHHHHHHTTT-SCCCCCSSSSEEEEECTTS-------CHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTE
T ss_pred HHHHHHHHHHHHHHHhc-CCccCCCeeEEEEEECCCC-------CHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCe
Confidence 88999999999999876 5666788899999999862 3468888887888999999998875 24689
Q ss_pred EEEEecCCCcccHHHHHHHHHHHH
Q 019899 307 FRCCFTSLTHEDIPLVIERIQKVA 330 (334)
Q Consensus 307 iRi~~~~~~~~~l~~~l~~l~~~~ 330 (334)
+|++++ .+++++++++++|++++
T Consensus 373 iRis~~-~~~~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 373 VRIALV-ADVATCVKAAEDIVSLY 395 (396)
T ss_dssp EEEECC-SCHHHHHHHHHHHHHHC
T ss_pred EEEEEc-CCHHHHHHHHHHHHHHh
Confidence 999998 49999999999999875
No 18
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=1.1e-43 Score=323.80 Aligned_cols=315 Identities=19% Similarity=0.327 Sum_probs=259.9
Q ss_pred hhhhhhhhcCCCCCCCC-cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCC-----
Q 019899 2 AGFMSQVLGQAVSFDPS-QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTD----- 75 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~-~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~----- 75 (334)
++|+.+.++ .+++++ +|++|+|+++++..++.+++++||+|+++.|+|+++...++ ..|.+++.+|+++++
T Consensus 87 a~~l~~~~g--~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~~~~~ 163 (429)
T 1yiz_A 87 SKLYSQLVD--RTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVK-AAGGIPRFIPLKPNKTGGTI 163 (429)
T ss_dssp HHHHHHHHT--SCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHH-HTTCEEEEEECBCCCSSSSE
T ss_pred HHHHHHHhC--CCCCCcCCEEEecChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHH-HcCCEEEEEeCCcccccccc
Confidence 455555555 557788 99999999999999999999999999999999999999988 899999999986432
Q ss_pred ---CccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchh
Q 019899 76 ---NFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSM 152 (334)
Q Consensus 76 ---~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~ 152 (334)
++.+|++++++++++ ++++|++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+++....++
T Consensus 164 ~~~~~~~d~~~l~~~l~~------~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~ 237 (429)
T 1yiz_A 164 SSADWVLDNNELEALFNE------KTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRI 237 (429)
T ss_dssp EGGGCBCCHHHHHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCG
T ss_pred cccCcccCHHHHHHHhcc------CceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcCh
Confidence 567999999998864 78999999999999999999999999999999999999999999998876555555
Q ss_pred hhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh--cccCCChHHHHHHHHhhCC-----hHHHH
Q 019899 153 AEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT--RFCSISAPTQRLLISMLSD-----TKFIQ 225 (334)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~-----~~~~~ 225 (334)
..+.. ..++++++.|+||.+|++|+|+||+++ ++++++.+.... ..++.+++.+.++..+++. .. .+
T Consensus 238 ~~~~~----~~~~~~~~~s~sK~~~~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~-~~ 311 (429)
T 1yiz_A 238 CTLPG----MWERTITIGSAGKTFSLTGWKIGWAYG-PEALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKS-PE 311 (429)
T ss_dssp GGSTT----TGGGEEEEEEHHHHHTCGGGCCEEEES-CHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTS-TT
T ss_pred hhccC----CcCceEEEecchhccCCCCcceEEEEe-CHHHHHHHHHHHhhcccCCChHHHHHHHHHHhcccccccc-hH
Confidence 54421 157899999999999989999999998 788888887653 3567888999888888765 21 13
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCC------CCChhhHHHHHHHHHHhcCeEEcCCCCc
Q 019899 226 EYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIP------SYSEKGELELWDKLLNIAKINVTPGSAC 299 (334)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~ll~~~gi~v~~g~~~ 299 (334)
+++.+.+++++++++++.+.|++.|+++..+.+|+++|++++.... .....+..++...|++++||.+.||..|
T Consensus 312 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f 391 (429)
T 1yiz_A 312 CYFNSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAF 391 (429)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHTCEEEECSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHh
Confidence 4567788899999999999999888888888889999999976310 0001245678888777799999999877
Q ss_pred CCC-----CCCeEEEEecCCCcccHHHHHHHHHHHHHH
Q 019899 300 HCI-----EPGWFRCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 300 ~~~-----~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
+.. .++++|++++ .+++++++++++|++++++
T Consensus 392 ~~~~~~~~~~~~iRis~~-~~~e~i~~~l~~l~~~l~~ 428 (429)
T 1yiz_A 392 YSEPNKHLGEDFVRYCFF-KKDENLQKAAEILRKWKGS 428 (429)
T ss_dssp SCGGGGGGTTTEEEEECC-SCHHHHHHHHHHHHHHSCC
T ss_pred CCCcccCCCCCeEEEEec-CCHHHHHHHHHHHHHhccC
Confidence 642 2579999999 6899999999999998754
No 19
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=1.5e-43 Score=318.61 Aligned_cols=304 Identities=19% Similarity=0.285 Sum_probs=255.0
Q ss_pred hhhhhhhhcCCCCCCCC-cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcccc
Q 019899 2 AGFMSQVLGQAVSFDPS-QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~-~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
++|+.+.++ .+++++ +|++|+|+++++..++.+++++||+|+++.|+|+++...++ ..|.+++.++++++ ++.+|
T Consensus 77 a~~l~~~~g--~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~-~~g~~~~~v~~~~~-~~~~d 152 (386)
T 1u08_A 77 AQKTERLYG--YQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIA-LSGGIVKRMALQPP-HFRVD 152 (386)
T ss_dssp HHHHHHHHS--CCCCTTTTEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHH-HTTCEEEEEECCTT-TCCCC
T ss_pred HHHHHHHhC--CCCCCCCCEEEcCChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHH-HcCCEEEEeecCcc-cCcCC
Confidence 456665555 567888 99999999999999999999999999999999999999888 89999999998532 57899
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++ +++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++..+...
T Consensus 153 ~~~l~~~l~~------~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~-- 224 (386)
T 1u08_A 153 WQEFAALLSE------RTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQL-- 224 (386)
T ss_dssp HHHHHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHH--
T ss_pred HHHHHHhhcc------cCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCc--
Confidence 9999999864 78999999999999999999999999999999999999999999998876555555544311
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
.++++++.|+||.+|++|+|+||+++ ++++.+.++.... .++.+++.+.++..+++.. ++++.+.+++++++
T Consensus 225 --~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~ 298 (386)
T 1u08_A 225 --RERAVAVSSFGKTYHMTGWKVGYCVA-PAPISAEIRKVHQYLTFSVNTPAQLALADMLRAE---PEHYLALPDFYRQK 298 (386)
T ss_dssp --HTTEEEEEEHHHHTTCGGGCCEEEEC-CHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHC---THHHHTHHHHHHHH
T ss_pred --cCcEEEEecchhhcCCcccceEEEEc-CHHHHHHHHHHHHhhccCCChHHHHHHHHHHhCC---cHHHHHHHHHHHHH
Confidence 57889999999999989999999998 7888888876543 4677888888888887542 34567788899999
Q ss_pred HHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC--CCCeEEEEecCCCc
Q 019899 239 YDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI--EPGWFRCCFTSLTH 316 (334)
Q Consensus 239 ~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~--~~~~iRi~~~~~~~ 316 (334)
++++.+.|++.|+++..+.+|+++|++++.... .+..++...|++++||.+.||..|+.. .++++|++++ .++
T Consensus 299 ~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~-~~~ 373 (386)
T 1u08_A 299 RDILVNALNESRLEILPCEGTYFLLVDYSAVST----LDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFA-KKE 373 (386)
T ss_dssp HHHHHHHTTSSSCEECCCCBSSEEEEECTTTCC----SCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECC-SCH
T ss_pred HHHHHHHHHHCCCeecCCCceEEEEEecCCCCC----CCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEc-CCH
Confidence 999999999889988888889999999875310 134678888777799999999877542 4679999998 688
Q ss_pred ccHHHHHHHHHH
Q 019899 317 EDIPLVIERIQK 328 (334)
Q Consensus 317 ~~l~~~l~~l~~ 328 (334)
+++++++++|++
T Consensus 374 ~~i~~~~~~l~~ 385 (386)
T 1u08_A 374 STLLAAAERLRQ 385 (386)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHhh
Confidence 999999998864
No 20
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=2.1e-43 Score=318.98 Aligned_cols=312 Identities=18% Similarity=0.217 Sum_probs=257.7
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCC-CCcccc
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRST-DNFAFS 80 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~-~~~~~~ 80 (334)
++|+.+..+ +++++++|++|+|+++++..++.+++++||+|+++.|+|+++...+. ..|.+++.+|+.++ +.+.+|
T Consensus 76 a~~l~~~~g--~~~~~~~v~~t~g~~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~g~~~~d 152 (399)
T 1c7n_A 76 KKWMKDRHQ--WDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIK-NQERKIIECELLEKDGYYTID 152 (399)
T ss_dssp HHHHHHHHC--CCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHH-TTTCEEEECCCEEETTEEECC
T ss_pred HHHHHHHhC--CCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCcHhHHHHHH-HcCCEEEecccccCCCCEEEc
Confidence 455555445 55778899999999999999999999999999999999999999988 88999999987422 246799
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++ .++++|++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+++..+.++..+.. +
T Consensus 153 ~~~l~~~l~~-----~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~--~ 225 (399)
T 1c7n_A 153 FQKLEKLSKD-----KNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDE--Q 225 (399)
T ss_dssp HHHHHHHHTC-----TTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCH--H
T ss_pred HHHHHHHhcc-----CCCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCc--c
Confidence 9999999973 27899999999999999999999999999999999999999999999887655555554421 0
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhccc---CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFC---SISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
. .++++++.|+||.+|++|+|+||++++++++.+.++.....+ +.+++.+.++..++... .+++++.++++++
T Consensus 226 ~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~ 301 (399)
T 1c7n_A 226 L-ADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRERFTKSRDATSGMPFTTLGYKACEICYKEC---GKWLDGCIKVIDK 301 (399)
T ss_dssp H-HTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHH
T ss_pred c-cCcEEEEEeChhhccccchheEEEEECCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhCC---hHHHHHHHHHHHH
Confidence 0 367899999999999999999999996678888887655443 56888888887777542 3556778889999
Q ss_pred HHHHHHHHHHh-C-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCC
Q 019899 238 LYDSFVAGLKQ-L-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLT 315 (334)
Q Consensus 238 ~~~~~~~~l~~-~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~ 315 (334)
+++++.+.|++ + ++++..+.+++++|++++... .+..++...|++++||.+.||..|+...++++|++++ ..
T Consensus 302 ~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~-~~ 375 (399)
T 1c7n_A 302 NQRIVKDFFEVNHPEIKAPLIEGTYLQWIDFRALK-----MDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLA-AP 375 (399)
T ss_dssp HHHHHHHHHHHHCTTSBCCCCSBSSEEEEECGGGC-----CCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECC-SC
T ss_pred HHHHHHHHHHhhCCCCeEecCCceEEEEEEcccCC-----CCHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEec-cC
Confidence 99999999988 5 888888889999999987531 1345788887667899999999887555789999999 55
Q ss_pred cccHHHHHHHHHHHHHHc
Q 019899 316 HEDIPLVIERIQKVAETC 333 (334)
Q Consensus 316 ~~~l~~~l~~l~~~~~~~ 333 (334)
++++++++++|++++++.
T Consensus 376 ~~~l~~~l~~l~~~l~~~ 393 (399)
T 1c7n_A 376 SSVIQESLERLNKALKDL 393 (399)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 889999999999998764
No 21
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=4.1e-44 Score=325.89 Aligned_cols=317 Identities=17% Similarity=0.344 Sum_probs=264.8
Q ss_pred ChhhhhhhhcCCCCCCC-CcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCC------
Q 019899 1 MAGFMSQVLGQAVSFDP-SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRS------ 73 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~-~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~------ 73 (334)
+++|+.+.++ +.+++ ++|++|+|+++++..++.+++++||+|+++.|+|.++...++ ..|.+++.+++.+
T Consensus 76 la~~~~~~~g--~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~G 152 (422)
T 3fvs_A 76 LASFFGELLG--QEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTM-MAGGRPVFVSLKPGPIQNG 152 (422)
T ss_dssp HHHHHHHHHT--CCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHH-HTTCEEEEEECBCCCCCSS
T ss_pred HHHHHHHhhC--CCCCCCCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHHHHH-HcCCEEEEEeccccccccc
Confidence 3566666666 56777 699999999999999999999999999999999999999988 8999999999864
Q ss_pred ----CCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCc
Q 019899 74 ----TDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEF 149 (334)
Q Consensus 74 ----~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~ 149 (334)
++++.+|++++++++++ ++++|++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++..+
T Consensus 153 ~~~~~~~~~~d~~~l~~~~~~------~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 226 (422)
T 3fvs_A 153 ELGSSSNWQLDPMELAGKFTS------RTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQH 226 (422)
T ss_dssp SCCBGGGSBCCHHHHHTTCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCC
T ss_pred ccccccCCCCCHHHHHhhcCC------CceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCC
Confidence 23567899999998875 79999999999999999999999999999999999999999999999887766
Q ss_pred chhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCChH----H
Q 019899 150 VSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDTK----F 223 (334)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~----~ 223 (334)
.++..+.. +.++++++.|+||.+|++|+|+||+++ ++++++.+..... .++.+++.+.++..++.... .
T Consensus 227 ~~~~~~~~----~~~~~i~~~S~sK~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 301 (422)
T 3fvs_A 227 ISIASLPG----MWERTLTIGSAGKTFSATGWKVGWVLG-PDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQ 301 (422)
T ss_dssp CCGGGSTT----TGGGEEEEEEHHHHHTCGGGCCEEEEC-CHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred CChhhccc----ccCcEEEEecchhccCCccceEEEEEe-CHHHHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccc
Confidence 66666543 157889999999999999999999998 8888888876543 56788999998888885310 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcC---C---C-CChhhHHHHHHHHHHhcCeEEcCC
Q 019899 224 IQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLI---P---S-YSEKGELELWDKLLNIAKINVTPG 296 (334)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~---~---~-~~~~~~~~~~~~ll~~~gi~v~~g 296 (334)
..+++.+++++++++++++.+.|++.|+++..+.+++++|++++... . . .......+++..+++++||.+.||
T Consensus 302 ~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g 381 (422)
T 3fvs_A 302 PSSYFVQFPQAMQRCRDHMIRSLQSVGLKPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPV 381 (422)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEG
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCCCeeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCc
Confidence 13456778899999999999999999999888999999999886521 0 0 000114578888888899999999
Q ss_pred CCcCC-----CCCCeEEEEecCCCcccHHHHHHHHHHHHHH
Q 019899 297 SACHC-----IEPGWFRCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 297 ~~~~~-----~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
+.|+. ..++++|++++ .+++++++++++|++++++
T Consensus 382 ~~f~~~~~~~~~~~~iRis~~-~~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 382 SIFYSVPHQKHFDHYIRFCFV-KDEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp GGGSCHHHHTTSCSEEEEECC-CCHHHHHHHHHHHHHHHHC
T ss_pred HHhcCCcCCCCCCCeEEEEec-CCHHHHHHHHHHHHHHHhh
Confidence 98863 34689999999 5999999999999999875
No 22
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=2.2e-43 Score=321.02 Aligned_cols=310 Identities=19% Similarity=0.271 Sum_probs=265.3
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCC-CCCCcccc
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCR-STDNFAFS 80 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~-~~~~~~~~ 80 (334)
++++.+..+ +.+++++|++++|+++|+..++.++.++||+|+++.|+|.++...+. ..|.+++.+|+. .++++.+|
T Consensus 106 ~~~l~~~~g--~~~~~~~v~~~~g~~ea~~~a~~~~~~~gd~Vi~~~~~y~~~~~~~~-~~g~~~~~~~~~~~~~~~~~d 182 (421)
T 3l8a_A 106 IDWERKEHD--YAVVKEDILFIDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTIR-LNDHRLVENSLQIINGRFEID 182 (421)
T ss_dssp HHHHHHHHC--CCCCGGGEEEESCHHHHHHHHHHHHSCTEEEEEEEESCCHHHHHHHH-HTTEEEEEEECEEETTEEECC
T ss_pred HHHHHHHhC--CCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEECCCCcHHHHHHHH-HCCCEEEeccccccCCCeeeC
Confidence 567777666 66788999999999999999999999999999999999999999988 899999999985 45667899
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
+++|++++++ .++++|++++|+||||.+++.+++++|.++|++||+++|+||+|+++.+++..+.++..+..+
T Consensus 183 ~~~le~~i~~-----~~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~-- 255 (421)
T 3l8a_A 183 FEQLEKDIID-----NNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDAS-- 255 (421)
T ss_dssp HHHHHHHHHH-----TTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTT--
T ss_pred HHHHHHHhhc-----cCCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCch--
Confidence 9999999985 289999999999999999999999999999999999999999999999888766666665431
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh---cccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT---RFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
. .++++++.|+||.+|++|+|+||++++++++++.+.... ..++.|++.+.++..++... +++++++++++++
T Consensus 256 ~-~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~~---~~~~~~~~~~~~~ 331 (421)
T 3l8a_A 256 Y-KDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQLANNQHEVPTVGMIATQAAFQYG---KPWLEELKTVIEG 331 (421)
T ss_dssp G-GGTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHH
T ss_pred h-cCcEEEEEeChhhccCchhheEeEEcCCHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHhcc---HHHHHHHHHHHHH
Confidence 1 477899999999999899999999995589988887654 33467888888888887632 4567788889999
Q ss_pred HHHHHHHHHHhC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCc
Q 019899 238 LYDSFVAGLKQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTH 316 (334)
Q Consensus 238 ~~~~~~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~ 316 (334)
+++++.+.|++. ++.+..+.++++.|++++.... +..++...|++++||.+.||..|+...++++|++++ .++
T Consensus 332 ~~~~l~~~L~~~~~i~~~~~~~~~~~~v~~~~~~~-----~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~-~~~ 405 (421)
T 3l8a_A 332 NIKLVIKELEAKTKIKVMEPEGTYLVWLDFSAYAI-----AQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVA-TPK 405 (421)
T ss_dssp HHHHHHHHHHHHCSCEEECCSBSSEEEEECGGGTC-----CTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECC-SCH
T ss_pred HHHHHHHHHHhCCCceEeCCCeeEEEEEeccccCC-----CHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEec-CCH
Confidence 999999999886 8888899999999999986311 235788887777899999999998766799999999 789
Q ss_pred ccHHHHHHHHHHHHH
Q 019899 317 EDIPLVIERIQKVAE 331 (334)
Q Consensus 317 ~~l~~~l~~l~~~~~ 331 (334)
+++++++++|+++++
T Consensus 406 ~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 406 NTVQEALSRIISVFG 420 (421)
T ss_dssp HHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999875
No 23
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=4.5e-43 Score=314.35 Aligned_cols=300 Identities=21% Similarity=0.341 Sum_probs=251.4
Q ss_pred hhhhhhhhcCCCCCCCC-cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcccc
Q 019899 2 AGFMSQVLGQAVSFDPS-QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~-~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
++|+.+.++ ..++++ +|++|+|+++++..++.+++++||+|+++.|+|+++...++ ..|.+++.+|+ ++++.+|
T Consensus 73 a~~~~~~~g--~~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~p~y~~~~~~~~-~~g~~~~~~~~--~~~~~~d 147 (376)
T 2dou_A 73 ARWYEGRYG--VGLDPRREALALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAAR-VASLRTFLIPL--REDGLAD 147 (376)
T ss_dssp HHHHHHHHS--CCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHH-HTTCEEEEECB--CTTSSBC
T ss_pred HHHHHHHhC--CCCCCCccEEEcCCcHHHHHHHHHHhcCCCCEEEECCCCcHhHHHHHH-HcCCEEEEeeC--CCCCCCC
Confidence 455555445 555666 99999999999999999999999999999999999999988 89999999998 5667789
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++ +++++++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+++. ..+...+..
T Consensus 148 ~~~l~~~l~~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~--- 217 (376)
T 2dou_A 148 LKAVPEGVWR------EAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGE-APSPLALPG--- 217 (376)
T ss_dssp GGGSCHHHHH------HEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSC-CCCGGGSTT---
T ss_pred HHHHHHhhcc------CceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC-CCChhhcCC---
Confidence 9999999975 789999999999999999999999999999999999999999999887652 223333221
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc--cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
..++++++.|+||.+|++|+|+||+++ ++++++.++..... ++.+++.+.++..+++.. ++++.+.+++++++
T Consensus 218 -~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~ 292 (376)
T 2dou_A 218 -AKERVVELFSLSKSYNLAGFRLGFALG-SEEALARLERVKGVIDFNQYAGVLRMGVEALKTP---KEVVRGYARVYRER 292 (376)
T ss_dssp -GGGTEEEEEEHHHHHTCGGGCCEEEEE-CHHHHHHHHHHHHHHCCCSCHHHHHHHHHHHTSC---HHHHHHHHHHHHHH
T ss_pred -CCCcEEEEecchhhcCChhheeEEEec-CHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhCc---HHHHHHHHHHHHHH
Confidence 146789999999999989999999998 88998888765443 467889999999888763 45567888899999
Q ss_pred HHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCccc
Q 019899 239 YDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHED 318 (334)
Q Consensus 239 ~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~ 318 (334)
++++.+.|++. +++..+.+|+++|++++... +..++...|++ +||.+.||..|+...++++|++++ .++++
T Consensus 293 ~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~-~gi~v~~g~~f~~~~~~~~Ris~~-~~~~~ 363 (376)
T 2dou_A 293 ALGMAEALKGV-LSLLPPRATMYLWGRLPEGV------DDLEFGLRLVE-RGVALAPGRGFGPGGKGFVRIALV-RPLEE 363 (376)
T ss_dssp HHHHHHHHTTT-SEECCCCBSSEEEEECCTTC------CHHHHHHHHHH-TTEECEEGGGGCGGGTTEEEEECC-SCHHH
T ss_pred HHHHHHHHHHh-cCccCCCeeEEEEEECCCCC------CHHHHHHHHHH-CCEEEcCchhhCCCCCCeEEEEec-CCHHH
Confidence 99999999988 77777888999999997532 34578888666 599999999887545689999998 58899
Q ss_pred HHHHHHHHHHHH
Q 019899 319 IPLVIERIQKVA 330 (334)
Q Consensus 319 l~~~l~~l~~~~ 330 (334)
+++++++|++++
T Consensus 364 i~~~l~~l~~~l 375 (376)
T 2dou_A 364 LLEAAKRIREAL 375 (376)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHHHh
Confidence 999999998764
No 24
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=7.7e-43 Score=314.45 Aligned_cols=301 Identities=22% Similarity=0.386 Sum_probs=255.2
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccH
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
++++.+.++ +++++++|++|+|+++++..++.+++++||+|++++|+|.++...++ ..|.+++.+++++++++.+|+
T Consensus 78 a~~~~~~~g--~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~ 154 (391)
T 3h14_A 78 ARLYGEWYG--VDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILR-ALGLVPVDLPTAPENRLQPVP 154 (391)
T ss_dssp HHHHHHHHC--CCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHH-HTTCEEEEEECCGGGTTSCCH
T ss_pred HHHHHHHhC--CCCCHHHEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHH-HcCCEEEEeecCcccCCCCCH
Confidence 556666556 66889999999999999999999999999999999999999999998 899999999987666778899
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
++++++ ++++|++++|+||||.++|.+++++|+++|++||+++|+||+|+++.+++.. .+...+
T Consensus 155 ~~l~~~---------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~------ 218 (391)
T 3h14_A 155 ADFAGL---------DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKA-VTALEL------ 218 (391)
T ss_dssp HHHTTS---------CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCC-CCGGGT------
T ss_pred HHHHhc---------CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCC-cChhhc------
Confidence 988765 5789999999999999999999999999999999999999999998887642 233222
Q ss_pred CCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHH
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLY 239 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (334)
.++++++.|+||.+|++|+|+||+++ ++++.+.+..... .++.+++.+.++..++.. .+++.+.++++++++
T Consensus 219 -~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~ 292 (391)
T 3h14_A 219 -TDECYVINSFSKYFSMTGWRVGWMVV-PEDQVRVVERIAQNMFICAPHASQVAALAALDC----DAELQANLDVYKANR 292 (391)
T ss_dssp -CSSSEEEEESSSTTCCTTSCCEEEEC-CGGGHHHHHHHHHHTTCCCCHHHHHHHHHHTTC----HHHHHHHHHHHHHHH
T ss_pred -CCCEEEEEechhccCCccceeEEEEe-CHHHHHHHHHHHhhhccCCCHHHHHHHHHHhCC----hHHHHHHHHHHHHHH
Confidence 57789999999999999999999998 7788888876544 346788888888888773 355677888999999
Q ss_pred HHHHHHHHhCCCcc-cCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCC-CCCCeEEEEecCCCcc
Q 019899 240 DSFVAGLKQLGIRC-SESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHC-IEPGWFRCCFTSLTHE 317 (334)
Q Consensus 240 ~~~~~~l~~~g~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~-~~~~~iRi~~~~~~~~ 317 (334)
+++.+.|+++++.. ..+.+++++|++++... .+..++...|++++||.+.||..|+. ..++++|++++ .+++
T Consensus 293 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~-~~~~ 366 (391)
T 3h14_A 293 KLMLERLPKAGFTRIAPPDGAFYVYADVSDLT-----DDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYA-RATA 366 (391)
T ss_dssp HHHHHHHHHHTCCCBCCCCBTTEEEEECTTTC-----SCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECC-SCHH
T ss_pred HHHHHHHHHcCCCcccCCCeeEEEEEecCccC-----CCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEec-CCHH
Confidence 99999999887664 46778899999987531 13468888888877999999999876 34689999999 5889
Q ss_pred cHHHHHHHHHHHHHHc
Q 019899 318 DIPLVIERIQKVAETC 333 (334)
Q Consensus 318 ~l~~~l~~l~~~~~~~ 333 (334)
++++++++|+++++++
T Consensus 367 ~i~~~l~~l~~~~~~~ 382 (391)
T 3h14_A 367 DIEEGLDRLEAFMQAR 382 (391)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999999875
No 25
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.6e-43 Score=320.92 Aligned_cols=310 Identities=22% Similarity=0.347 Sum_probs=256.5
Q ss_pred hhhhhhhhcCCCCCCCC-cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCC-CCccc
Q 019899 2 AGFMSQVLGQAVSFDPS-QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRST-DNFAF 79 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~-~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~-~~~~~ 79 (334)
++|+.+.++ ++++++ +|++|+|+++++..++.+++++||+|+++.|+|+++...++ ..|.+++.++++++ +++.+
T Consensus 72 a~~~~~~~g--~~~~~~~~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~~ 148 (411)
T 2o0r_A 72 AAQRRRHFG--VDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVA-MAGAHRVTVPLVPDGRGFAL 148 (411)
T ss_dssp HHHHHHHHC--CCCCTTTSEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHH-HTTCEEEEEECEEETTEEEC
T ss_pred HHHHHHHcC--CCCCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHH-HcCCEEEEeeccccccCCCC
Confidence 455555555 557788 99999999999999999999999999999999999999888 89999999997532 35679
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
|++++++++++ ++++|++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++..+.++..+..
T Consensus 149 d~~~l~~~l~~------~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~-- 220 (411)
T 2o0r_A 149 DADALRRAVTP------RTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDG-- 220 (411)
T ss_dssp CHHHHHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTT--
T ss_pred CHHHHHHhhcc------CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccC--
Confidence 99999999875 7899999999999999999999999999999999999999999998887655555554422
Q ss_pred ccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 160 EVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
..++++++.|+||.+|++|+|+||+++ ++++++.+..... .++.+++.+.++..+++.. ++++.+.++++++
T Consensus 221 --~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~ 294 (411)
T 2o0r_A 221 --MAERTITISSAAKMFNCTGWKIGWACG-PAELIAGVRAAKQYLSYVGGAPFQPAVALALDTE---DAWVAALRNSLRA 294 (411)
T ss_dssp --TGGGEEEEEEHHHHTTCTTTCEEEEEC-CHHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHC---HHHHHHHHHHHHH
T ss_pred --CCCCEEEEeechhhcCCccceEEEEee-CHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCC---hHHHHHHHHHHHH
Confidence 146789999999999999999999998 7888888876543 4667888888888887532 4566788889999
Q ss_pred HHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC-----------CCCe
Q 019899 238 LYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI-----------EPGW 306 (334)
Q Consensus 238 ~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~-----------~~~~ 306 (334)
+++++.+.|++.|+++..+.+|+++|++++.... .+..++...|++++||.+.||..|... .+++
T Consensus 295 ~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~ 370 (411)
T 2o0r_A 295 RRDRLAAGLTEIGFAVHDSYGTYFLCADPRPLGY----DDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHL 370 (411)
T ss_dssp HHHHHHHHHHHHTCEECCCCBSSEEEEECGGGTC----CCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGC
T ss_pred HHHHHHHHHHHcCCEecCCCeeEEEEEecCCCCC----CCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCe
Confidence 9999999998889988888889999999975310 134678888777789999999887322 2578
Q ss_pred EEEEecCCCcccHHHHHHHHHHHHHHc
Q 019899 307 FRCCFTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 307 iRi~~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
+|++++ .+++++++++++|++++++.
T Consensus 371 iRis~~-~~~e~i~~~~~~l~~~~~~~ 396 (411)
T 2o0r_A 371 VRFTFC-KRDDTLDEAIRRLSVLAERP 396 (411)
T ss_dssp EEEECC-SCHHHHHHHHHHHGGGGC--
T ss_pred EEEEec-CCHHHHHHHHHHHHHHHhcc
Confidence 999998 58899999999999887653
No 26
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=5.7e-43 Score=314.95 Aligned_cols=308 Identities=18% Similarity=0.364 Sum_probs=257.7
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccH
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
++|+.+.++ +.+++++|++|+|+++++..++.+++++||+|++++|+|+++...++ ..|.+++.++.++++++.+|+
T Consensus 77 a~~~~~~~g--~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~ 153 (388)
T 1j32_A 77 AQKLQRDNG--LCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVK-LAEGTPVILPTTVETQFKVSP 153 (388)
T ss_dssp HHHHHHHHC--CCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHH-HTTCEEEEECCCGGGTTCCCH
T ss_pred HHHHHHhcC--CCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH-HcCCEEEEecCCcccCCCCCH
Confidence 556665555 55678899999999999999999999999999999999999999888 899999999986545678999
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
+++++++++ ++++|++++|+||||.++|.+++++|+++|+++|+++|+|++|+.+.+++..+.++..+..+ .
T Consensus 154 ~~l~~~l~~------~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~--~ 225 (388)
T 1j32_A 154 EQIRQAITP------KTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPE--A 225 (388)
T ss_dssp HHHHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHH--H
T ss_pred HHHHHhcCc------CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHcccc--c
Confidence 999999875 78999999999999999999999999999999999999999999998876554455544220 0
Q ss_pred CCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHH
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLY 239 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (334)
.++++++.|+||.+|++|+|+||+++ ++++.+.+..... .++.+++.+.++..++... .+++.+.++++++++
T Consensus 226 -~~~~~~~~s~sK~~~~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~ 300 (388)
T 1j32_A 226 -YERSVVCSGFAKTYAMTGWRVGFLAG-PVPLVKAATKIQGHSTSNVCTFAQYGAIAAYENS---QDCVQEMLAAFAERR 300 (388)
T ss_dssp -HHTEEEEEESTTTTTCTTTCCEEEEC-CHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSC---SHHHHHHHHHHHHHH
T ss_pred -cCCEEEEeechhccCCcccceEEEEe-CHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCC---cHHHHHHHHHHHHHH
Confidence 35789999999999989999999998 8888888876543 3567888888887777642 345577788899999
Q ss_pred HHHHHHHHhC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCccc
Q 019899 240 DSFVAGLKQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHED 318 (334)
Q Consensus 240 ~~~~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~ 318 (334)
+++.+.|++. |+++..+.+++++|++++... .+..++...|++++||.+.||..|+. ++++|++++ .++++
T Consensus 301 ~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~-~~~~~ 372 (388)
T 1j32_A 301 RYMLDALNAMPGLECPKPDGAFYMFPSIAKTG-----RSSLDFCSELLDQHQVATVPGAAFGA--DDCIRLSYA-TDLDT 372 (388)
T ss_dssp HHHHHHHHTCTTCBCCCCCBTTEECCBCGGGT-----CCHHHHHHHHHHHHCEECEEGGGGTC--TTBEEEECC-SCHHH
T ss_pred HHHHHHHhhCCCCcccCCCeeEEEEEecCCCC-----CCHHHHHHHHHHhCCEEEeChhhhCC--CCcEEEEec-CCHHH
Confidence 9999999987 888888888999998886420 13467888877768999999988864 679999998 78999
Q ss_pred HHHHHHHHHHHHHHc
Q 019899 319 IPLVIERIQKVAETC 333 (334)
Q Consensus 319 l~~~l~~l~~~~~~~ 333 (334)
+++++++|++++++.
T Consensus 373 i~~~~~~l~~~l~~~ 387 (388)
T 1j32_A 373 IKRGMERLEKFLHGI 387 (388)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998764
No 27
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=2.1e-43 Score=320.09 Aligned_cols=312 Identities=20% Similarity=0.326 Sum_probs=260.4
Q ss_pred hhhhhhhhcCCCCCCC-CcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCC-------
Q 019899 2 AGFMSQVLGQAVSFDP-SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRS------- 73 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~-~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~------- 73 (334)
++|+.+.++ ..+++ ++|++|+|+++++..++.+++++||+|+++.|+|.++...++ ..|.+++.+++.+
T Consensus 71 a~~~~~~~~--~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~g~~ 147 (410)
T 3e2y_A 71 SCLYGKIYQ--RQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVR-MAGAVPVFIPLRSKPTDGMK 147 (410)
T ss_dssp HHHHHHHHT--SCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHH-HTTCEEEEEECEECCCCSSC
T ss_pred HHHHHHHhC--CCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHH-HcCCEEEEEecccccccccc
Confidence 566666666 56777 799999999999999999999999999999999999999998 8999999999752
Q ss_pred --CCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcch
Q 019899 74 --TDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVS 151 (334)
Q Consensus 74 --~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~ 151 (334)
+.++.+|++++++++++ ++++|++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++..+.+
T Consensus 148 ~~~~~~~~d~~~l~~~~~~------~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~ 221 (410)
T 3e2y_A 148 WTSSDWTFDPRELESKFSS------KTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVK 221 (410)
T ss_dssp CBGGGEECCHHHHHTTCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCC
T ss_pred ccccCCcCCHHHHHhhcCC------CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCC
Confidence 24567899999998865 7999999999999999999999999999999999999999999999988766666
Q ss_pred hhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCCh----HHHH
Q 019899 152 MAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDT----KFIQ 225 (334)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~----~~~~ 225 (334)
+..+.. ..++++++.|+||.+|++|+|+||+++ ++++++.+..... .++.+++.+.++..++... ....
T Consensus 222 ~~~~~~----~~~~~i~~~S~sK~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 296 (410)
T 3e2y_A 222 IATLPG----MWERTITIGSAGKTFSVTGWKLGWSIG-PAHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPE 296 (410)
T ss_dssp GGGSTT----CGGGEEEEEEHHHHSSCGGGCCEEEEC-CHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTT
T ss_pred HHHcCC----ccCeEEEEecchhhcCCCCceEEEEEE-CHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhccccchH
Confidence 665543 257889999999999999999999998 8888888876543 5678899999888887520 0113
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCC-----ChhhHHHHHHHHHHhcCeEEcCCCCcC
Q 019899 226 EYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSY-----SEKGELELWDKLLNIAKINVTPGSACH 300 (334)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~~~~~~ll~~~gi~v~~g~~~~ 300 (334)
+++.+++++++++++++.+.|++.|+++..+.+++++|++++...... ...+..+++..+++++||.+.||+.|+
T Consensus 297 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~ 376 (410)
T 3e2y_A 297 CYFNSLPKELEVKRDRMVRLLNSVGLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFC 376 (410)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTTTCEEEBCSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhC
Confidence 456778889999999999999999999888999999999987532211 112335788888888999999999886
Q ss_pred CC-----CCCeEEEEecCCCcccHHHHHHHHHH
Q 019899 301 CI-----EPGWFRCCFTSLTHEDIPLVIERIQK 328 (334)
Q Consensus 301 ~~-----~~~~iRi~~~~~~~~~l~~~l~~l~~ 328 (334)
.. .++++|++++ .+++++++++++|++
T Consensus 377 ~~~~~~~~~~~iRis~~-~~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 377 DSKSKPHFEKLVRFCFI-KKDSTLDAAEEIFRA 408 (410)
T ss_dssp CTTTHHHHTTEEEEECC-CCHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCEEEEEEc-CCHHHHHHHHHHHHh
Confidence 43 2589999998 699999999999875
No 28
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=1e-42 Score=313.42 Aligned_cols=299 Identities=27% Similarity=0.432 Sum_probs=253.1
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccH
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
++|+.+..+ +.+++++|++|+|+++++..++.+++++||+|++++|+|+++...++ ..|.+++.+|.++++++.+|+
T Consensus 88 a~~~~~~~g--~~~~~~~v~~~~g~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~ 164 (389)
T 1o4s_A 88 AKRIGERYK--KDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQII-LAGGTVNVVETFMSKNFQPSL 164 (389)
T ss_dssp HHHHHHHHT--CCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHH-HTTCEEEEEECCGGGTTCCCH
T ss_pred HHHHHHHhC--CCCCHHHEEEecCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHH-HcCCEEEEEecCCccCCCCCH
Confidence 455555445 55678899999999999999999999999999999999999999988 899999999986445678999
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
+++++++++ ++++|++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++ ...++..+..
T Consensus 165 ~~l~~~l~~------~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g-~~~~~~~~~~---- 233 (389)
T 1o4s_A 165 EEVEGLLVG------KTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTD-EFTSILDVSE---- 233 (389)
T ss_dssp HHHHHTCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSS-CCCCHHHHCS----
T ss_pred HHHHHhccc------CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCC-CCCCHhhcCC----
Confidence 999998875 78999999999999999999999999999999999999999999988765 3345555432
Q ss_pred CCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHH
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLY 239 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (334)
..++++++.|+||.+|++|+|+||+++ ++++.+.+..... .++.+++.+.++..++... +.+.++++++++
T Consensus 234 ~~~~~i~~~s~sK~~~~~G~r~G~l~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~------~~~~~~~~~~~~ 306 (389)
T 1o4s_A 234 GFDRIVYINGFSKSHSMTGWRVGYLIS-SEKVATAVSKIQSHTTSCINTVAQYAALKALEVD------NSYMVQTFKERK 306 (389)
T ss_dssp SSTTEEEEEESTTTTTCGGGCCEEEEC-CHHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCC------CHHHHHHHHHHH
T ss_pred CCCcEEEEeechhhcCCcccceEEEEe-CHHHHHHHHHHhhhcccCCCHHHHHHHHHHHhcc------HHHHHHHHHHHH
Confidence 147899999999999989999999998 8888888876544 3577888898888888764 356677888899
Q ss_pred HHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccH
Q 019899 240 DSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDI 319 (334)
Q Consensus 240 ~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l 319 (334)
+++.+.|++.|+++..+.+++++|++++ . +..++...|++++||.+.||..|+. ++++|++++ .+++++
T Consensus 307 ~~l~~~L~~~g~~~~~~~~~~~~~~~~~--~------~~~~l~~~l~~~~gi~v~~g~~f~~--~~~~Ris~~-~~~~~l 375 (389)
T 1o4s_A 307 NFVVERLKKMGVKFVEPEGAFYLFFKVR--G------DDVKFCERLLEEKKVALVPGSAFLK--PGFVRLSFA-TSIERL 375 (389)
T ss_dssp HHHHHHHHHTTCCCCCCSBSSEEEEECS--S------CHHHHHHHHHHHHCEECEEGGGGTC--TTEEEEECC-SCHHHH
T ss_pred HHHHHHHHhcCCeeecCCcceEEEEeCC--C------CHHHHHHHHHHHCCEEEeCchhcCC--CCeEEEEEe-CCHHHH
Confidence 9999999888888888888999999887 1 3467888877678999999988864 569999999 589999
Q ss_pred HHHHHHHHHHHHH
Q 019899 320 PLVIERIQKVAET 332 (334)
Q Consensus 320 ~~~l~~l~~~~~~ 332 (334)
++++++|.+++++
T Consensus 376 ~~~l~~l~~~l~~ 388 (389)
T 1o4s_A 376 TEALDRIEDFLNS 388 (389)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhc
Confidence 9999999998854
No 29
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=1e-42 Score=314.25 Aligned_cols=298 Identities=22% Similarity=0.453 Sum_probs=248.1
Q ss_pred ChhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCC-CeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccc
Q 019899 1 MAGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHG-NALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~g-d~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~ 79 (334)
+++|+.+.++ +++++++|++|+|+++++..++.+++++| |+|++++|+|+++...++ ..|.+++.+|+++ +++.+
T Consensus 85 la~~l~~~~g--~~~~~~~i~~~~g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~~~~-~~g~~~~~v~~~~-~~~~~ 160 (398)
T 3ele_A 85 IAEFLNNTHG--THFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVN-AAGARLVEVPADT-EHFQI 160 (398)
T ss_dssp HHHHHHHHHC--CCCCGGGEEEESSHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHHHHH-HTTCEEEEECCCT-TTSSC
T ss_pred HHHHHHHHhC--CCCChHHEEEccCHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHHHHH-HcCCEEEEEecCC-cCCcC
Confidence 3566766666 66889999999999999999999999999 999999999999999998 8999999999853 46789
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHh------cCcEEEEeccccccccCCCCcchhh
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFARE------KNIHVISDEIYGGSIFGNEEFVSMA 153 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~------~~~~vi~D~~~~~~~~~~~~~~~~~ 153 (334)
|++++++++++ +++++++++|+||||.++|.+++++|+++|++ ||+++|+||+|+++.+++.......
T Consensus 161 d~~~l~~~l~~------~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~ 234 (398)
T 3ele_A 161 DFDALEERINA------HTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVT 234 (398)
T ss_dssp CHHHHHHTCCT------TEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGG
T ss_pred CHHHHHHHhCc------CCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChH
Confidence 99999999875 79999999999999999999999999999999 9999999999999988764433332
Q ss_pred hhhhccccCCCcEEEEecccccCCCCCceEEEEeecCH-----HHHHHHHHhh---cccCCChHHHHHHHHhhCChHHHH
Q 019899 154 EILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNE-----SVLAAAKKLT---RFCSISAPTQRLLISMLSDTKFIQ 225 (334)
Q Consensus 154 ~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~-----~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~ 225 (334)
.. .++++++.|+||.+|++|+|+||++++++ .+.+.+.... ..++.+.+.+.++..++...+
T Consensus 235 ~~-------~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--- 304 (398)
T 3ele_A 235 KY-------YDNTLVCYSYSKSLSLPGERIGYVLVPDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATG--- 304 (398)
T ss_dssp GT-------CSSEEEEEESTTTSSCTTTCCEEEECCTTSTTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCCC---
T ss_pred hh-------cCCeEEEEehhhcCCCccceeEEEEEcchhhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCHH---
Confidence 21 57889999999999999999999998443 2334443322 235667788888887776542
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCC
Q 019899 226 EYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPG 305 (334)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~ 305 (334)
.+++++++++++.+.|+++|+++..+.+++++|++++.. +..++... ++++||.+.||..|+. ++
T Consensus 305 -----~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~-------~~~~~~~~-l~~~gi~v~~g~~~~~--~~ 369 (398)
T 3ele_A 305 -----DINAYKENRDLLYEGLTRIGYHCFKPDGAFYMFVKALED-------DSNAFCEK-AKEEDVLIVAADGFGC--PG 369 (398)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHTCCEECCSBSSEEEEECSSS-------CHHHHHHH-HHTTTEECEESGGGTC--TT
T ss_pred -----HHHHHHHHHHHHHHHHHHcCCeecCCCeeEEEEEEcCCC-------CHHHHHHH-HHHCCEEEeCccccCC--CC
Confidence 245677888888999988899988899999999998753 34577776 5668999999998875 67
Q ss_pred eEEEEecCCCcccHHHHHHHHHHHHHHcC
Q 019899 306 WFRCCFTSLTHEDIPLVIERIQKVAETCK 334 (334)
Q Consensus 306 ~iRi~~~~~~~~~l~~~l~~l~~~~~~~~ 334 (334)
++|++++ .+++++++++++|++++++++
T Consensus 370 ~iRis~~-~~~e~i~~~l~~l~~~l~~~~ 397 (398)
T 3ele_A 370 WVRISYC-VDREMIKHSMPAFEKIYKKYN 397 (398)
T ss_dssp EEEEECC-SCHHHHHHHHHHHHHHHHHHC
T ss_pred eEEEEec-CCHHHHHHHHHHHHHHHHHhh
Confidence 9999998 899999999999999998764
No 30
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=6.8e-43 Score=314.61 Aligned_cols=307 Identities=17% Similarity=0.298 Sum_probs=259.0
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCC--CCCCccc
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCR--STDNFAF 79 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~--~~~~~~~ 79 (334)
++++.+.++ +.+++++|++|+|+++++..++.+++++||+|+++.|+|.++...++ ..|.+++.+++. .++++.+
T Consensus 77 ~~~l~~~~g--~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~ 153 (391)
T 4dq6_A 77 VNWLYRRHN--WKIKSEWLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSVVK-NNNRELIISPLQKLENGNYIM 153 (391)
T ss_dssp HHHHHHHHC--CCCCGGGEEEESCHHHHHHHHHHHHSCTTCEEEECSSCCTHHHHHHH-HTTCEEEECCCEECTTSCEEC
T ss_pred HHHHHHHhC--CCCcHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCHHHHHHHH-HcCCeEEeeeeeecCCCceEe
Confidence 456666555 55788999999999999999999999999999999999999999998 899999999986 4456779
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
|++++++++++ ++++++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++....++..+..+
T Consensus 154 d~~~l~~~l~~-------~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~- 225 (391)
T 4dq6_A 154 DYEDIENKIKD-------VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKE- 225 (391)
T ss_dssp CHHHHHHHCTT-------EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHH-
T ss_pred eHHHHHHHhhc-------CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCcc-
Confidence 99999998862 7899999999999999999999999999999999999999999998877665666554320
Q ss_pred ccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc---ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHH
Q 019899 160 EVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR---FCSISAPTQRLLISMLSDTKFIQEYLETNKRRIK 236 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 236 (334)
. .++++++.|+||.+|++|+|+||++++++++.+.+..... .++.+++.+.++..++... ++++.+.+++++
T Consensus 226 -~-~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~ 300 (391)
T 4dq6_A 226 -F-EKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDDAFTRIDIKRNNCFSLVATEASYNNG---ESWLESFLEYLE 300 (391)
T ss_dssp -H-HHTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC---HHHHHHHHHHHH
T ss_pred -c-cCcEEEEEechhhccCcccceEEEEeCCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhch---HHHHHHHHHHHH
Confidence 0 3678999999999999999999999866788888876533 3467888888887777542 345678888999
Q ss_pred HHHHHHHHHHHhC--CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCC
Q 019899 237 KLYDSFVAGLKQL--GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSL 314 (334)
Q Consensus 237 ~~~~~~~~~l~~~--g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~ 314 (334)
++++++.+.|++. ++++..+.+++++|++++... .+..++...|++++||.+.||..|+...++++|++++ .
T Consensus 301 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~-~ 374 (391)
T 4dq6_A 301 SNIDFAIKYINENMPKLKVRKPEGTYLLWVDFSALG-----LSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLA-C 374 (391)
T ss_dssp HHHHHHHHHHHHHCTTSEECCCSBSSEEEEECGGGC-----CCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECC-S
T ss_pred HHHHHHHHHHHhhCCCCEecCCCccEEEEEEhhhcC-----CCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEc-C
Confidence 9999999999884 888889999999999998521 1346888887775599999999998766799999999 7
Q ss_pred CcccHHHHHHHHHHHH
Q 019899 315 THEDIPLVIERIQKVA 330 (334)
Q Consensus 315 ~~~~l~~~l~~l~~~~ 330 (334)
+++++++++++|++++
T Consensus 375 ~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 375 PRSMLEEALIRIKNAI 390 (391)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHh
Confidence 8999999999999876
No 31
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=8.1e-43 Score=314.17 Aligned_cols=310 Identities=16% Similarity=0.253 Sum_probs=254.8
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCC-Ccccc
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTD-NFAFS 80 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~-~~~~~ 80 (334)
++|+.+..+ +.+++++|++|+|+++++..++.+++++||+|+++.|+|+++...++ ..|.+++.+|++.++ ++.+|
T Consensus 74 a~~l~~~~g--~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~~d 150 (390)
T 1d2f_A 74 AHWFSTQHY--TAIDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKAIE-GNQRTVMPVALEKQADGWFCD 150 (390)
T ss_dssp HHHHHHHSC--CCCCGGGEEEESCHHHHHHHHHHHSSCTTCEEEEEESCCHHHHHHHH-HTTCEEEEEECEECSSSEECC
T ss_pred HHHHHHhcC--CCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHH-HCCCEEEEeecccCCCccccC
Confidence 455554444 55788999999999999999999999999999999999999999988 899999999985432 46799
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++ .++++|++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++..+.++..+..
T Consensus 151 ~~~l~~~l~~-----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~--- 222 (390)
T 1d2f_A 151 MGKLEAVLAK-----PECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVAR--- 222 (390)
T ss_dssp HHHHHHHHTS-----TTEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCC---
T ss_pred HHHHHHHhcc-----CCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcch---
Confidence 9999999874 26899999999999999999999999999999999999999999999887665556555432
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc---c-cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR---F-CSISAPTQRLLISMLSDTKFIQEYLETNKRRIK 236 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 236 (334)
.-... +.|+||.+|++|+|+||++++++++.+.++.... . ++.+++.+.++..++... .+++.+.+++++
T Consensus 223 --~~~d~-~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~ 296 (390)
T 1d2f_A 223 --GDWAL-LTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQG---APWLDALRIYLK 296 (390)
T ss_dssp --SSEEE-EECSHHHHTCGGGCCEEEEECSHHHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHC---HHHHHHHHHHHH
T ss_pred --hhHhh-ccCccHhhcccChhheEEEECCHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHhcC---HHHHHHHHHHHH
Confidence 10123 8999999999999999999866888888876543 3 367888888877777532 445677888999
Q ss_pred HHHHHHHHHHHh-C-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCC
Q 019899 237 KLYDSFVAGLKQ-L-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSL 314 (334)
Q Consensus 237 ~~~~~~~~~l~~-~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~ 314 (334)
++++++.+.|++ + ++++..+.+++++|++++... .+..++...|++++||.+.||..|+...++++|++++ .
T Consensus 297 ~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~-~ 370 (390)
T 1d2f_A 297 DNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLN-----IDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAG-C 370 (390)
T ss_dssp HHHHHHHHHHHHHCSSCCCCCCSBCSEEEEECGGGC-----CCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECC-S
T ss_pred HHHHHHHHHHHhhCCCCEEecCCccEEEEEEccccC-----CCHHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEec-C
Confidence 999999999988 5 788888888999999987530 1346788887757899999999887545689999999 5
Q ss_pred CcccHHHHHHHHHHHHHHcC
Q 019899 315 THEDIPLVIERIQKVAETCK 334 (334)
Q Consensus 315 ~~~~l~~~l~~l~~~~~~~~ 334 (334)
+++++++++++|++++++.+
T Consensus 371 ~~~~l~~~l~~l~~~l~~~~ 390 (390)
T 1d2f_A 371 PRSKLEKGVAGLINAIRAVR 390 (390)
T ss_dssp CHHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHhhC
Confidence 68899999999999998753
No 32
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=1.6e-42 Score=315.78 Aligned_cols=310 Identities=20% Similarity=0.339 Sum_probs=255.3
Q ss_pred hhhhhhhhcCCCC-CCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcccc
Q 019899 2 AGFMSQVLGQAVS-FDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 2 ~~~~~~~~~~~~~-~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
|+|+.++.+ +. +++++|++|+|+++++..++.+++++||+|++++|+|.++...++ ..|.+++.+|+++ + .+|
T Consensus 95 a~~l~~~~g--~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~v~~~~-~--~~d 168 (425)
T 1vp4_A 95 LKLLERMYG--ITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFR-QYLANFVVVPLED-D--GMD 168 (425)
T ss_dssp HHHHHHHHC--CCSCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHH-TTTCEEEEEEEET-T--EEC
T ss_pred HHHHHhccC--CCCCCcccEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHH-HcCCEEEEeccCC-C--CCC
Confidence 445544334 44 678899999999999999999999999999999999999999998 8999999999743 2 489
Q ss_pred HHHHHHHHHHHHHc--CCceeEE-EEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhh
Q 019899 81 ITALDQAFNQARKR--GVKVRGI-LICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILE 157 (334)
Q Consensus 81 ~~~l~~~l~~~~~~--~~~~~~i-~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~ 157 (334)
++++++++++...+ +.++++| ++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++..+..
T Consensus 169 ~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~ 248 (425)
T 1vp4_A 169 LNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGG 248 (425)
T ss_dssp HHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHC
T ss_pred HHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCC
Confidence 99999999863221 1268887 47899999999999999999999999999999999999999887665556666543
Q ss_pred ccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc--cCCChHHHHHHHHhhCChHHHHHHHHHHHHHH
Q 019899 158 AEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--CSISAPTQRLLISMLSDTKFIQEYLETNKRRI 235 (334)
Q Consensus 158 ~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 235 (334)
.++++++.|+||.++ +|+|+||+++ ++++++.+...... ++.+++.+.++..+++... .++++.+.++++
T Consensus 249 -----~~~~i~~~s~sK~~~-~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~ 320 (425)
T 1vp4_A 249 -----PERVVLLNTFSKVLA-PGLRIGMVAG-SKEFIRKIVQAKQSADLCSPAITHRLAARYLERYD-LLEQLKPTIELY 320 (425)
T ss_dssp -----TTTEEEEEESTTTTC-GGGCEEEEEC-CHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSC-HHHHTHHHHHHH
T ss_pred -----CCCEEEEeccccccc-cccceEEEee-CHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCC-HHHHHHHHHHHH
Confidence 578899999999999 9999999998 78888888765433 5678899999888886532 255677888899
Q ss_pred HHHHHHHHHHHHhC-----CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC--CCCeEE
Q 019899 236 KKLYDSFVAGLKQL-----GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI--EPGWFR 308 (334)
Q Consensus 236 ~~~~~~~~~~l~~~-----g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~--~~~~iR 308 (334)
+++++++.+.|++. |+++..+.+|+++|++++...+ ..++...|++ +||.+.||..|+.. .++++|
T Consensus 321 ~~~~~~l~~~L~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~------~~~l~~~l~~-~gi~v~~g~~f~~~~~~~~~iR 393 (425)
T 1vp4_A 321 RRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPEGFD------TWEMFEYAKR-KKVFYVPGRVFKVYDEPSPSMR 393 (425)
T ss_dssp HHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEECCTTCC------TTTTHHHHHH-HTEECEEGGGGCTTCCCCSEEE
T ss_pred HHHHHHHHHHHHHhCCCCCceEEecCCccEEEEEEcCCCCC------HHHHHHHHHH-CCCEEECchhhcCCCCCCCeEE
Confidence 99999999999875 6887778889999999985322 2467888666 49999999988643 357999
Q ss_pred EEecCCCcccHHHHHHHHHHHHHH
Q 019899 309 CCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 309 i~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
++++..+++++++++++|++++++
T Consensus 394 is~~~~~~e~i~~~l~~l~~~l~~ 417 (425)
T 1vp4_A 394 LSFCLPPDEKIVEGIKRLREVVLE 417 (425)
T ss_dssp EECSSSCHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCHHHHHHHHHHHHHHHHH
Confidence 999855889999999999998865
No 33
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=1.3e-42 Score=311.35 Aligned_cols=301 Identities=17% Similarity=0.198 Sum_probs=248.4
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCC--CCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccc
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADH--GNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~--gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~ 79 (334)
++|+.+.++ +.+++++|++|+|+++++..++.+++++ ||+|+++.|+|.++...++ ..|.+++.++++++++ +
T Consensus 69 a~~l~~~~g--~~~~~~~i~~t~g~~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~--~ 143 (376)
T 3ezs_A 69 RGFFKRRFK--IELKENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAK-FIKAKSLLMPLTKEND--F 143 (376)
T ss_dssp HHHHHHHHS--CCCCGGGEEEESSSHHHHHHHHHHHTTTCSSCEEEEEESCCTHHHHHHH-HTTCEEEEEECCGGGT--S
T ss_pred HHHHHHHhC--CCCCHHHEEECcCcHHHHHHHHHHHcCCCCCCEEEEecCCcHhHHHHHH-HcCCEEEEcccCCCCC--c
Confidence 556666555 5568899999999999999999999999 9999999999999999988 8999999999854433 3
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
++ ++++++++ +++++++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+++. ..+......+.
T Consensus 144 ~~-~l~~~~~~------~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~ 215 (376)
T 3ezs_A 144 TP-SLNEKELQ------EVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTP-PPSLLEACMLA 215 (376)
T ss_dssp CC-CCCHHHHH------HCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSC-CCCHHHHHHHT
T ss_pred ch-hHHhhhcc------CCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCC-CCCHHHccccc
Confidence 44 66777765 789999999999999999999999999999999999999999999988763 33433332100
Q ss_pred c-cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHH
Q 019899 160 E-VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDTKFIQEYLETNKRRIK 236 (334)
Q Consensus 160 ~-~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 236 (334)
+ ...++++++.|+||.+|++|+|+||+++ ++++++.+..... .++.+++.+.++..++...+ ++.+.+++++
T Consensus 216 ~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~ 290 (376)
T 3ezs_A 216 GNEAFKNVLVIHSLSKRSSAPGLRSGFIAG-DSRLLEKYKAFRAYLGYTSANAIQKASEAAWLDDR----HAEFFRNIYA 290 (376)
T ss_dssp TCTTCTTEEEEEESTTTTTCGGGCCEEEEE-CHHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHCSH----HHHHHHHHHH
T ss_pred cccccCcEEEEecchhccCCccceeEEEee-CHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCcH----HHHHHHHHHH
Confidence 0 0168899999999999989999999998 8999998887654 46788999999888887643 3577788899
Q ss_pred HHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcC--CCCCCeEEEEecCC
Q 019899 237 KLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACH--CIEPGWFRCCFTSL 314 (334)
Q Consensus 237 ~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--~~~~~~iRi~~~~~ 314 (334)
++++++.+.|+ ++. .+.+++++|++++ +..++...|++++||.+.||..|+ ...++++|++++ .
T Consensus 291 ~~~~~l~~~l~--~~~--~~~~~~~~~~~~~---------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~-~ 356 (376)
T 3ezs_A 291 NNLKLARKIFK--NTL--IYPYSFYVYLPVQ---------NGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALV-Y 356 (376)
T ss_dssp HHHHHHHHHST--TCC--CCSBSSEEEEECS---------CHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECC-S
T ss_pred HHHHHHHHHhc--CCC--CCCcceEEEEECC---------CHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEc-C
Confidence 99999999988 555 6778999999987 236788887776899999999987 345689999998 5
Q ss_pred CcccHHHHHHHHHHHHHHcC
Q 019899 315 THEDIPLVIERIQKVAETCK 334 (334)
Q Consensus 315 ~~~~l~~~l~~l~~~~~~~~ 334 (334)
+++++++++++|++++++++
T Consensus 357 ~~~~i~~~l~~l~~~l~~~~ 376 (376)
T 3ezs_A 357 DTPLLEKPLEIIETYRENHA 376 (376)
T ss_dssp CHHHHHHHHHHHHHHHCC--
T ss_pred CHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999997653
No 34
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=100.00 E-value=6e-43 Score=316.69 Aligned_cols=307 Identities=26% Similarity=0.408 Sum_probs=257.1
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccH
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
++|+.+..+ +++++++|++|+|+++++..++.+++++||+|++++|+|+++...++ ..|.+++.+++++++++.+|+
T Consensus 88 a~~l~~~~g--~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~ 164 (406)
T 1xi9_A 88 VEREKRKNG--VDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVK-FYGGKPVEYRTIEEEDWQPDI 164 (406)
T ss_dssp HHHHHHHHC--CCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHH-HTTCEEEEEEEEGGGTSEECH
T ss_pred HHHHHHhcC--CCCCHHHEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHHHH-HcCCEEEEeecCCCcCCcCCH
Confidence 566666555 67788999999999999999999999999999999999999999888 899999999985435677899
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
+++++++++ ++++|++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++ ...++..+.
T Consensus 165 ~~l~~~l~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~----- 232 (406)
T 1xi9_A 165 DDIRKKITD------RTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEG-EHISPGSLT----- 232 (406)
T ss_dssp HHHHHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSS-CCCCHHHHC-----
T ss_pred HHHHHhhCc------CceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCC-CCCCHHHcC-----
Confidence 999999875 78999999999999999999999999999999999999999999988743 334454441
Q ss_pred CCCc-EEEEecccccCCCCCceEEEEe--ecCH----HHHHHHHHhhcc-cCCChHHHHHHHHhhCChHHHHHHHHHHHH
Q 019899 162 DKDR-VHIIYGLSKDLSLPGFRTGVIY--SYNE----SVLAAAKKLTRF-CSISAPTQRLLISMLSDTKFIQEYLETNKR 233 (334)
Q Consensus 162 ~~~~-~~~~~s~sK~~~~~g~r~g~i~--~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 233 (334)
.++ ++++.|+||.++++|+|+||++ + ++ ++++.+...... ++.+++.+.++..+++.. .++++++++
T Consensus 233 -~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-~~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~ 307 (406)
T 1xi9_A 233 -KDVPVIVMNGLSKVYFATGWRLGYMYFVD-PENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLTGP---MDYLKEYMK 307 (406)
T ss_dssp -SSSCEEEEEESTTTTCCGGGCCEEEEEEC-TTCTTHHHHHHHHHHHHHTCCSCSHHHHHHHHHHHSC---CHHHHHHHH
T ss_pred -CCceEEEEeccccccCCCccEEEEEEEec-CchhHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhCC---cHHHHHHHH
Confidence 466 8999999999998999999999 7 66 888888765433 678889999988888532 223577788
Q ss_pred HHHHHHHHHHHHHHhC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEec
Q 019899 234 RIKKLYDSFVAGLKQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFT 312 (334)
Q Consensus 234 ~~~~~~~~~~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~ 312 (334)
+++++++++.+.|++. ++++..+.+|+++|++++.... .+..++...|++++||.+.||..|+...++++|++++
T Consensus 308 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~ 383 (406)
T 1xi9_A 308 KLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKIEVGPW----KNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL 383 (406)
T ss_dssp HHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECSCSC----SSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECC
T ss_pred HHHHHHHHHHHHHHhCCCCeeecCCeeEEEEEecCccCC----CCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEec
Confidence 8999999999999988 7888778889999988875211 1346788887767899999999887545689999999
Q ss_pred CCCcccHHHHHHHHHHHHHHc
Q 019899 313 SLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 313 ~~~~~~l~~~l~~l~~~~~~~ 333 (334)
.+++++++++++|++++++.
T Consensus 384 -~~~~~i~~~~~~l~~~l~~~ 403 (406)
T 1xi9_A 384 -PPIEILEEAMDRFEKFMKER 403 (406)
T ss_dssp -SCHHHHHHHHHHHHHHHHHC
T ss_pred -CCHHHHHHHHHHHHHHHHHH
Confidence 89999999999999998764
No 35
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=100.00 E-value=8.1e-43 Score=316.82 Aligned_cols=304 Identities=23% Similarity=0.406 Sum_probs=249.9
Q ss_pred CCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHH
Q 019899 13 VSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQAR 92 (334)
Q Consensus 13 ~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~ 92 (334)
+.+++++|++|+|+++++..++.+++++||+|+++.|+|+++...++ ..|.+++.+++++++++.+|++++++++++
T Consensus 100 ~~~~~~~v~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-- 176 (416)
T 1bw0_A 100 STIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCK-AYGIGMHFYNCRPENDWEADLDEIRRLKDD-- 176 (416)
T ss_dssp GGCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHH-HTTCEEEEEEEEGGGTTEECHHHHHHHCCT--
T ss_pred CCCCcceEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHHH-HcCcEEEEeecCcccCCCCCHHHHHHHhcc--
Confidence 44778999999999999999999999999999999999999999888 899999999985444678999999999875
Q ss_pred HcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCC----CcchhhhhhhccccCCCcEEE
Q 019899 93 KRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNE----EFVSMAEILEAEEVDKDRVHI 168 (334)
Q Consensus 93 ~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 168 (334)
+++++++++|+||||.++|.+++++|+++|++||++||+||+|+.+.+++. .+.++..+.. .+++++
T Consensus 177 ----~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~-----~~~~i~ 247 (416)
T 1bw0_A 177 ----KTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFET-----TVPRVI 247 (416)
T ss_dssp ----TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCC-----SCCEEE
T ss_pred ----CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccC-----CCcEEE
Confidence 688999999999999999999999999999999999999999999888765 3445444432 456889
Q ss_pred EecccccCCCCCceEEEEeecCH-----HHHHHHHHh-hcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHH
Q 019899 169 IYGLSKDLSLPGFRTGVIYSYNE-----SVLAAAKKL-TRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSF 242 (334)
Q Consensus 169 ~~s~sK~~~~~g~r~g~i~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 242 (334)
+.|+||.++++|+|+||++++++ .+...++.. ...++.+++.+.++..+++... .+++.+.+++++++++++
T Consensus 248 ~~s~sK~~~~~Glr~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l 325 (416)
T 1bw0_A 248 LGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTP--QEHLDQIVAKIEESAMYL 325 (416)
T ss_dssp EEESTTTTSCGGGCCEEEEEECTTCSCHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSC--HHHHHHHHHHHHHHHHHH
T ss_pred EecchhhCCCCCceEEEEEeeCchhhHHHHHHHHHHHhccccCCCcHHHHHHHHHHhccc--HHHHHHHHHHHHHHHHHH
Confidence 99999999889999999998665 233333332 2356789999999998886422 445677788899999999
Q ss_pred HHHHHhC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHH
Q 019899 243 VAGLKQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPL 321 (334)
Q Consensus 243 ~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~ 321 (334)
.+.|+++ |+++..+.+++++|++++..... ...+..++...|++++||.+.||..|+. ++++|++++ .+++++++
T Consensus 326 ~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~gi~v~~g~~f~~--~~~iRis~~-~~~e~l~~ 401 (416)
T 1bw0_A 326 YNHIGECIGLAPTMPRGAMYLMSRIDLEKYR-DIKTDVEFFEKLLEEENVQVLPGTIFHA--PGFTRLTTT-RPVEVYRE 401 (416)
T ss_dssp HHHHTTSTTEEECCCCBTTEEEEEECGGGBS-SCCSHHHHHHHHHHHHCEECEEGGGGTC--TTEEEEECC-SCHHHHHH
T ss_pred HHHHHhCCCCcccCCCeeEEEEEeCCHHHcC-CCCCHHHHHHHHHHHCCEEEecccccCC--CCeEEEEec-CCHHHHHH
Confidence 9999987 78877788899999888642000 0023467888877779999999998864 679999997 78999999
Q ss_pred HHHHHHHHHHHcC
Q 019899 322 VIERIQKVAETCK 334 (334)
Q Consensus 322 ~l~~l~~~~~~~~ 334 (334)
++++|.+++++++
T Consensus 402 ~l~~l~~~l~~~~ 414 (416)
T 1bw0_A 402 AVERIKAFCQRHA 414 (416)
T ss_dssp HHHHHHHHHHHHB
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998753
No 36
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=8.1e-42 Score=311.54 Aligned_cols=307 Identities=15% Similarity=0.230 Sum_probs=256.0
Q ss_pred hhhhhhhhcCCCCCCCCc---EEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhc-cCcEEEEEeCCCCCCc
Q 019899 2 AGFMSQVLGQAVSFDPSQ---IVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFR-TGVELIPVHCRSTDNF 77 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~---i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~-~g~~v~~v~~~~~~~~ 77 (334)
|+|+.+. + +++++++ |++|+|+++++..++.+++++||+|++++|+|+++...++ . .|.+++.+++++++ +
T Consensus 98 a~~~~~~-~--~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~~g~~~~~~~~~~~~-~ 172 (430)
T 2x5f_A 98 QQKMLRD-N--PELSIDNMSRPIVTNALTHGLSLVGDLFVNQDDTILLPEHNWGNYKLVFN-TRNGANLQTYPIFDKD-G 172 (430)
T ss_dssp HHHHHHH-C--TTCCGGGBCCCEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHT-TTTCCEEEEECCBCTT-S
T ss_pred HHHHhcc-C--cccCCCccceEEEcCCchHHHHHHHHHHhCCCCEEEEcCCcCccHHHHHH-HhcCCeEEEEeccCcc-C
Confidence 4455442 2 4678889 9999999999999999999999999999999999999998 8 89999999985433 6
Q ss_pred cccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHh-----cCcEEEEeccccccccCCCCcchh
Q 019899 78 AFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFARE-----KNIHVISDEIYGGSIFGNEEFVSM 152 (334)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~-----~~~~vi~D~~~~~~~~~~~~~~~~ 152 (334)
.+|++++++++++. +.+++++++++|+||||.++|.+++++|+++|++ +|+++|+||+|+.+.+++..+.++
T Consensus 173 ~~d~~~l~~~l~~~---~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 249 (430)
T 2x5f_A 173 HYTTDSLVEALQSY---NKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSL 249 (430)
T ss_dssp CBCSHHHHHHHHHC---CSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCH
T ss_pred CcCHHHHHHHHHhc---CCCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHH
Confidence 89999999999752 2368899999999999999999999999999999 999999999999998876544455
Q ss_pred h-hhhhccccCCCc---EEEEecccccCCCCCceEEEEee--cCHHHHHHHHHhh------cccCCChHHHHHHHHhhC-
Q 019899 153 A-EILEAEEVDKDR---VHIIYGLSKDLSLPGFRTGVIYS--YNESVLAAAKKLT------RFCSISAPTQRLLISMLS- 219 (334)
Q Consensus 153 ~-~~~~~~~~~~~~---~~~~~s~sK~~~~~g~r~g~i~~--~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~- 219 (334)
. .+.. ..++ ++++.|+||.+|++|+|+||+++ +++++.+.+.... ..++.+++.+.++..+++
T Consensus 250 ~~~~~~----~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 325 (430)
T 2x5f_A 250 FTALTN----LHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKN 325 (430)
T ss_dssp HHHHHT----TCCTTEEEEEEEEHHHHTTCGGGCCEEEEEBCCCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHS
T ss_pred HHHHhh----ccCCcceEEEEEecccCCCCCCCCeEEEEEecCCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHcc
Confidence 4 4432 1466 89999999999989999999997 4778888887654 346789999999999998
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHH----hCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcC
Q 019899 220 DTKFIQEYLETNKRRIKKLYDSFVAGLK----QLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTP 295 (334)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~ 295 (334)
..++ .+.+.+.+++++++++.+.+.|+ +.|+++..+.+|+++|++++ .. +..++...|++++||.+.|
T Consensus 326 ~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~~-~~------~~~~~~~~l~~~~gi~v~~ 397 (430)
T 2x5f_A 326 NKQF-DKEIEQNIQTLKERYEVTKEVVYADQYHSHWQAYDFNSGYFMAIKVH-DV------DPEALRKHLIDKYSIGVIA 397 (430)
T ss_dssp CHHH-HHHHHHHHHHHHHHHHHHHHHHTCGGGTTTEEECCCCBSSEEEEEES-SS------CHHHHHHHHHHHHCEECEE
T ss_pred ChHH-HHHHHHHHHHHHHHHHHHHHHHHhhCCCCCceeeCCCceEEEEeCCC-CC------CHHHHHHHHHHhCCEEEec
Confidence 7644 34456688999999999999998 66888888889999999998 22 3467888876668999999
Q ss_pred CCCcCCCCCCeEEEEecCCCcccHHHHHHHHHHHHHHcC
Q 019899 296 GSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAETCK 334 (334)
Q Consensus 296 g~~~~~~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~~~ 334 (334)
| .++++|++++..+++++++++++|++++++.+
T Consensus 398 g------~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~~ 430 (430)
T 2x5f_A 398 L------NATDIRIAFSCVEKDDIPHVFDSIAKAIDDLR 430 (430)
T ss_dssp C------SSSEEEEEGGGSCGGGHHHHHHHHHHHHHHHC
T ss_pred C------CCCeEEEEEecCCHHHHHHHHHHHHHHHHhcC
Confidence 7 25789999996689999999999999998753
No 37
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=1.4e-41 Score=307.82 Aligned_cols=312 Identities=22% Similarity=0.314 Sum_probs=255.6
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccH
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
++|+.+..+ +.+++++|++|+|+++++..++.+++++||+|+++.|+|.++...++ ..|.+++.+|.++ + .+|+
T Consensus 85 a~~~~~~~g--~~~~~~~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~-~~g~~~~~v~~~~-~--~~d~ 158 (407)
T 2zc0_A 85 AAFLKKYDH--LEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAFE-QLGAKIEGVPVDN-D--GMRV 158 (407)
T ss_dssp HHHHHHHSC--CCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHH-TTTCEEEEEEEET-T--EECH
T ss_pred HHHHHHhcC--CCCCcceEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHH-HcCCEEEEcccCC-C--CCCH
Confidence 444444334 45778999999999999999999999999999999999999999888 8999999999743 2 4899
Q ss_pred HHHHHHHHHHHHcCCceeEE-EEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 82 TALDQAFNQARKRGVKVRGI-LICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i-~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++.....+.++++| ++++|+||||.++|.+++++|+++|++||+++|+|++|+.+.+++....++..+..
T Consensus 159 ~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--- 235 (407)
T 2zc0_A 159 DLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDN--- 235 (407)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCS---
T ss_pred HHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCC---
Confidence 99999997432222368887 47788999999999999999999999999999999999998887655555555533
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc--cCCChHHHHHHHHhhCChHHHH-HHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--CSISAPTQRLLISMLSDTKFIQ-EYLETNKRRIKK 237 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~ 237 (334)
.++++++.|+||.++ +|+|+||+++ ++++.+.++..... ++.+++.+.++..+++... .+ +++.+.++++++
T Consensus 236 --~~~~i~~~s~sK~~~-~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~ 310 (407)
T 2zc0_A 236 --EGRVIVAGTLSKVLG-TGFRIGWIIA-EGEILKKVLMQKQPIDFCAPAISQYIALEYLKRGY-FEKYHLEGALLGYKE 310 (407)
T ss_dssp --SCCEEEEEESTTTTC-TTSCCEEEEC-CHHHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTH-HHHHTTTTHHHHHHH
T ss_pred --CCCEEEEcccccccC-CCcceEEEec-CHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCC-chHHHHHHHHHHHHH
Confidence 468899999999999 9999999998 78898888765443 4568899999988887653 24 566778888999
Q ss_pred HHHHHHHHHHhC--CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC--CCCeEEEEecC
Q 019899 238 LYDSFVAGLKQL--GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI--EPGWFRCCFTS 313 (334)
Q Consensus 238 ~~~~~~~~l~~~--g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~--~~~~iRi~~~~ 313 (334)
+++++.+.|++. ++++..+.+++++|++++... +..++...|++++||.+.||..|+.. .++++|++++.
T Consensus 311 ~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~ 384 (407)
T 2zc0_A 311 KRDIMLKALENHLPNAEFTKPIAGMFVMFFLPEGA------DGISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFSR 384 (407)
T ss_dssp HHHHHHHHHHHHCTTSCBCCCSBSSEEEEECSTTC------CHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSS
T ss_pred HHHHHHHHHHHhCCCCEEecCCCcEEEEEEcCCCC------CHHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCC
Confidence 999999999874 677777788999999997532 34678888777559999999888653 35799999985
Q ss_pred CCcccHHHHHHHHHHHHHHc
Q 019899 314 LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 314 ~~~~~l~~~l~~l~~~~~~~ 333 (334)
.+++++++++++|++++++.
T Consensus 385 ~~~~~i~~~~~~l~~~l~~~ 404 (407)
T 2zc0_A 385 PSKEEIPIGIKKLAKLYKEK 404 (407)
T ss_dssp SCTTHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHH
Confidence 58999999999999998763
No 38
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=1.5e-41 Score=301.85 Aligned_cols=296 Identities=17% Similarity=0.250 Sum_probs=250.5
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITAL 84 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l 84 (334)
+++.+++.+++++++|++|+|+++++..++.+++++||+|+++.|+|+++...++ ..|.+++.++.+ .++.+|++++
T Consensus 56 l~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~-~~g~~~~~~~~~--~~~~~d~~~l 132 (354)
T 3ly1_A 56 LGNKLAAHHQVEAPSILLTAGSSEGIRAAIEAYASLEAQLVIPELTYGDGEHFAK-IAGMKVTKVKML--DNWAFDIEGL 132 (354)
T ss_dssp HHHHHHHHTTSCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSSCTHHHHHHH-HTTCEEEEECCC--TTSCCCHHHH
T ss_pred HHHHHHHHhCCChHHEEEeCChHHHHHHHHHHHhCCCCeEEECCCCchHHHHHHH-HcCCEEEEecCC--CCCCCCHHHH
Confidence 3444555566788999999999999999999999999999999999999999998 899999999984 3578999999
Q ss_pred HHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCC-
Q 019899 85 DQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDK- 163 (334)
Q Consensus 85 ~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~- 163 (334)
++++++ ..++++|++++|+||||.++|.+++.+|+++| ++|+++|+|++|+.+.+++.....+..... .
T Consensus 133 ~~~l~~----~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~-----~~ 202 (354)
T 3ly1_A 133 KAAVAA----YSGPSIVYLVNPNNPTGTITPADVIEPWIASK-PANTMFIVDEAYAEFVNDPRFRSISPMITQ-----GA 202 (354)
T ss_dssp HHHHHT----CSSCEEEEEESSCTTTCCCCCHHHHHHHHHTC-CTTEEEEEECTTGGGCCCTTCCCSHHHHHT-----TC
T ss_pred HHHhcc----CCCCCEEEEeCCCCCcCCCcCHHHHHHHHHhC-CCCeEEEEeccHHHhccccccCCHHHHhhh-----cC
Confidence 999983 02799999999999999999999999999998 899999999999998876643333333322 4
Q ss_pred CcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHH
Q 019899 164 DRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFV 243 (334)
Q Consensus 164 ~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (334)
++++++.|+||.+|++|+|+||+++ ++++.+.++.....++.+++.+.++..++... +++.+.+++++++++++.
T Consensus 203 ~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~l~ 277 (354)
T 3ly1_A 203 ENIILLKTFSKIHAMAGMRVGYAVA-HPTVIALMGRYVAGEKINFSGVDAALASMNDS----AFITYSKKSNDVSRQILL 277 (354)
T ss_dssp SSEEEEEESSSTTCCGGGCCEEEEC-CHHHHHHHGGGTTCSCCCHHHHHHHHHHTTCH----HHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEeeChhhccChhhhheeeec-CHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999998 89999999888777899999999999999864 456778888999999999
Q ss_pred HHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHH
Q 019899 244 AGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVI 323 (334)
Q Consensus 244 ~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l 323 (334)
+.|+++++.+..+ .+.++|++++. +..++...|. ++||.+. |.+++ .++++|++++ +++++++++
T Consensus 278 ~~l~~~~~~~~~~-~~~~~~~~~~~--------~~~~~~~~l~-~~gi~v~-g~~~~--~~~~iRis~~--~~~~i~~~~ 342 (354)
T 3ly1_A 278 KALEDLKLPYLPS-EGNFVFHQLVV--------PLKDYQTHMA-DAGVLIG-RAFPP--ADNWCRISLG--TPQEMQWVA 342 (354)
T ss_dssp HHHHHHTCCBCCC-CSSEEEEECSS--------CHHHHHHHHH-HTTEECC-CCCTT--CTTEEEEECC--CHHHHHHHH
T ss_pred HHHHHCCCeECCC-CceEEEEECCC--------CHHHHHHHHH-HCCEEEe-ecCCC--CCCEEEEEcC--CHHHHHHHH
Confidence 9999888887755 45568899875 2457778855 5899998 77554 4789999988 889999999
Q ss_pred HHHHHHHHHc
Q 019899 324 ERIQKVAETC 333 (334)
Q Consensus 324 ~~l~~~~~~~ 333 (334)
+.|++++++.
T Consensus 343 ~~l~~~l~~~ 352 (354)
T 3ly1_A 343 DTMREFRKKS 352 (354)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHhh
Confidence 9999998764
No 39
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=100.00 E-value=4.2e-42 Score=310.22 Aligned_cols=302 Identities=20% Similarity=0.369 Sum_probs=253.1
Q ss_pred hhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHH
Q 019899 6 SQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALD 85 (334)
Q Consensus 6 ~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~ 85 (334)
++.+++.+++++++|++|+|+++++..++.+++++||+|+++.|+|+++...++ ..|.+++.+|.++ + .+|+++++
T Consensus 80 ~~~la~~~g~~~~~v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~~~~~~-~--~~d~~~l~ 155 (397)
T 2zyj_A 80 RAFVAEWIGVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFR-LQGPRFLTVPAGE-E--GPDLDALE 155 (397)
T ss_dssp HHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHH-TTCCEEEEEEEET-T--EECHHHHH
T ss_pred HHHHHHHhCCChhhEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHH-HcCCEEEecCcCC-C--CCCHHHHH
Confidence 333433345678899999999999999999999999999999999999999988 8999999999743 2 48999999
Q ss_pred HHHHHHHHcCCceeEE-EEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCC-
Q 019899 86 QAFNQARKRGVKVRGI-LICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDK- 163 (334)
Q Consensus 86 ~~l~~~~~~~~~~~~i-~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~- 163 (334)
+++++. ++++| ++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+++..+.++..+.. .
T Consensus 156 ~~l~~~-----~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~-----~~ 225 (397)
T 2zyj_A 156 EVLKRE-----RPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAR-----EA 225 (397)
T ss_dssp HHHHHC-----CCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHH-----HH
T ss_pred HHHhhc-----CCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCc-----cc
Confidence 999862 67877 47899999999999999999999999999999999999999887665556666543 3
Q ss_pred --CcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc--cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHH
Q 019899 164 --DRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLY 239 (334)
Q Consensus 164 --~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (334)
++++++.|+||.++ +|+|+||+++ ++++.+.+...... ++.+++.+.++..+++...+ +++.+.++++++++
T Consensus 226 ~~~~~i~~~s~sK~~~-~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~ 301 (397)
T 2zyj_A 226 GYPGVIYLGSFSKVLS-PGLRVAFAVA-HPEALQKLVQAKQGADLHTPMLNQMLVHELLKEGFS--ERLERVRRVYREKA 301 (397)
T ss_dssp TCCCEEEEEESTTTTC-GGGCCEEEEC-CHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTTHH--HHHHHHHHHHHHHH
T ss_pred CCCeEEEEeccccccc-ccceeEEEec-CHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCH--HHHHHHHHHHHHHH
Confidence 68899999999999 9999999998 78888888765433 56789999999999987543 56788888999999
Q ss_pred HHHHHHHHhC---CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC--CCCeEEEEecCC
Q 019899 240 DSFVAGLKQL---GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI--EPGWFRCCFTSL 314 (334)
Q Consensus 240 ~~~~~~l~~~---g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~--~~~~iRi~~~~~ 314 (334)
+++.+.|++. |+++..+.+|+++|++++... +..++.+.|++ +||.+.||..|+.. .++++|++++..
T Consensus 302 ~~l~~~L~~~~~~g~~~~~~~~g~~~~~~~~~~~------~~~~~~~~l~~-~gi~v~~g~~f~~~~~~~~~iRis~~~~ 374 (397)
T 2zyj_A 302 QAMLHALDREVPKEVRYTRPKGGMFVWMELPKGL------SAEGLFRRALE-ENVAFVPGGPFFANGGGENTLRLSYATL 374 (397)
T ss_dssp HHHHHHHHHHSCTTSEECCCSBSSEEEEECSTTC------CHHHHHHHHHH-TTEEEEESGGGCTTSCCTTEEEEECSSS
T ss_pred HHHHHHHHHHCCCCeEEccCCccEEEEEEcCCCC------CHHHHHHHHHH-CCCEEechHHhcCCCCCCCeEEEEcCCC
Confidence 9999999885 788877888999999997532 34678888666 59999999988643 368999999955
Q ss_pred CcccHHHHHHHHHHHHHH
Q 019899 315 THEDIPLVIERIQKVAET 332 (334)
Q Consensus 315 ~~~~l~~~l~~l~~~~~~ 332 (334)
+++++++++++|++++++
T Consensus 375 ~~~~i~~~~~~l~~~l~~ 392 (397)
T 2zyj_A 375 DREGIAEGVRRLGRALKG 392 (397)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 899999999999998875
No 40
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=100.00 E-value=5.3e-42 Score=307.24 Aligned_cols=300 Identities=21% Similarity=0.273 Sum_probs=255.3
Q ss_pred hhhhhcCCC-CCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHH
Q 019899 5 MSQVLGQAV-SFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITA 83 (334)
Q Consensus 5 ~~~~~~~~~-~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~ 83 (334)
+++.+++.+ +++++++++|+|+++++..++.+++++||+|+++.|+|.++...++ ..|.+++.+++++++++.+|+++
T Consensus 68 l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~~~ 146 (375)
T 3op7_A 68 FKKSVSQLYTGVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDIPK-SLGAEVDLWQIEEENGWLPDLEK 146 (375)
T ss_dssp HHHHHHTTSSSCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHHHHH-HTTCEEEEEEEEGGGTTEECHHH
T ss_pred HHHHHHHHhccCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHH-HcCCEEEEEeccccCCCCCCHHH
Confidence 455555544 5788999999999999999999999999999999999999999988 89999999998666778899999
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCC
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDK 163 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (334)
+++++++ ++++|++++|+||||.++|.+++++|.++|++||+++|+||+|+.+.+. ........ .
T Consensus 147 l~~~l~~------~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~--~~~~~~~~-------~ 211 (375)
T 3op7_A 147 LRQLIRP------TTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSEL--DVPSIIEV-------Y 211 (375)
T ss_dssp HHHHCCT------TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSS--CCCCHHHH-------C
T ss_pred HHHhhcc------CCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccc--CCCchhhh-------c
Confidence 9999975 7899999999999999999999999999999999999999999988775 22333322 5
Q ss_pred CcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc--cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 019899 164 DRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDS 241 (334)
Q Consensus 164 ~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 241 (334)
++++++.|+||.+|++|+|+||+++ ++++.+.++..... ++.+++.+.++..++.. .++++.+.+++++++++.
T Consensus 212 ~~~i~~~s~sK~~~~~G~r~G~v~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~ 287 (375)
T 3op7_A 212 DKGIAVNSLSKTYSLPGIRIGWVAA-NHQVTDILRDYRDYTMICAGVFDDLVAQLALAH---YQEILERNRHILEENLAI 287 (375)
T ss_dssp TTEEEEEESSSSSSCGGGCCEEEEC-CHHHHHHHTTTGGGTTSCCCHHHHHHHHHHHHT---HHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEeEChhhcCCcccceEEEEe-CHHHHHHHHHHHhhhccCCCcHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHH
Confidence 7789999999999989999999998 99999999876554 45677888877777764 255667888888999999
Q ss_pred HHHHHHhC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHH
Q 019899 242 FVAGLKQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIP 320 (334)
Q Consensus 242 ~~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~ 320 (334)
+.+.|++. ++.+..+.++++.|+.++... +..+++..+++++||.+.||..|+. ++++|++++ .++++++
T Consensus 288 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ll~~~gi~v~~g~~~~~--~~~iRi~~~-~~~~~i~ 358 (375)
T 3op7_A 288 LDQWIEEEPLVSYIRPAVVSTSFVKIAVDM------PMEDFCLQLLQEHGVLLVPGNRFER--DGYVRLGFA-CEQETLI 358 (375)
T ss_dssp HHHHHHHCTTEEECCCSSSSCEEEEECCSS------CHHHHHHHHHHHHCEECEEGGGGTC--TTEEEECCC-SCHHHHH
T ss_pred HHHHHhhCCCceEecCCCeEEEeEEcCCCC------CHHHHHHHHHHhCCEEEeChhhhCC--CCeEEEEec-CCHHHHH
Confidence 99999886 777778888888888887543 3468888887889999999998874 789999998 5568999
Q ss_pred HHHHHHHHHHHHc
Q 019899 321 LVIERIQKVAETC 333 (334)
Q Consensus 321 ~~l~~l~~~~~~~ 333 (334)
+++++|.++++++
T Consensus 359 ~~l~~l~~~l~~~ 371 (375)
T 3op7_A 359 KGLEKLSQFLRRF 371 (375)
T ss_dssp HHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999765
No 41
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=6.1e-42 Score=308.23 Aligned_cols=297 Identities=16% Similarity=0.209 Sum_probs=237.7
Q ss_pred hhhhhhhhcCCCCCCCCc--EEEecCcHHHHHHHHHHhcC--CCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCc
Q 019899 2 AGFMSQVLGQAVSFDPSQ--IVLTAGATPAVEILCFCLAD--HGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNF 77 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~--i~~~~g~~~~~~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~ 77 (334)
++|+.++.. ..+++++ +++|+|+++|+.+++..+.+ + |+|++++|+|++|...++ ..|.+++.+|+.+++++
T Consensus 82 a~~~~~~~~--~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~-~~g~~~~~v~~~~~~~~ 157 (405)
T 3k7y_A 82 QNLIFGNNS--KYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIE-SRGFNLKYINFFDYNLI 157 (405)
T ss_dssp HHHHHCSSC--TTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHH-TTTCEEEEECCEETTTT
T ss_pred HHHHcCCCC--ccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHH-HcCCeEEEEeccccccC
Confidence 556644322 3445664 59999999999999999877 8 999999999999999999 99999999998545678
Q ss_pred cccHHHHHHHHHHHHHcCCceeEEEEeCC-CCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCC--Ccchhhh
Q 019899 78 AFSITALDQAFNQARKRGVKVRGILICNP-ANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNE--EFVSMAE 154 (334)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~~~~~~i~~~~p-~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~--~~~~~~~ 154 (334)
.+|++++++++++. .++++++++.| |||||.+++.+++++|+++|++|+++||+||+|.++.+++. ...++..
T Consensus 158 ~~d~~~l~~~l~~~----~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~ 233 (405)
T 3k7y_A 158 DINYDLFLNDLRNI----PNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRK 233 (405)
T ss_dssp EECHHHHHHHHHHS----CSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHH
T ss_pred CcCHHHHHHHHHhC----CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHH
Confidence 99999999999852 24577777766 89999999999999999999999999999999999988542 2233444
Q ss_pred hhhccccCCCcEEEEecccccCCCCCceEEEEee--cCHHHHHHHHH----h-hcc-cCCChHHHHHHHHhhCChHH---
Q 019899 155 ILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYS--YNESVLAAAKK----L-TRF-CSISAPTQRLLISMLSDTKF--- 223 (334)
Q Consensus 155 ~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~--~~~~~~~~~~~----~-~~~-~~~~~~~~~~~~~~l~~~~~--- 223 (334)
+.. ..++++++.||||+++++|+|+||+++ +++++++.+.. . +.. .+.+...|.++..++...++
T Consensus 234 ~~~----~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~ 309 (405)
T 3k7y_A 234 FEE----KNIAFSVCQSFSKNMSLYGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLN 309 (405)
T ss_dssp HHT----TTCCEEEEEECTTTSCCTTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHH
T ss_pred HHh----cCCcEEEEeeCCccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHH
Confidence 433 157899999999999999999999853 47776665532 2 222 34567888888888877432
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----hCC----CcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcC
Q 019899 224 IQEYLETNKRRIKKLYDSFVAGLK----QLG----IRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTP 295 (334)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~l~----~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~ 295 (334)
..+++.+++++++++++.+.+.|+ ++| +++..+.+|||+|+.++. +++.+| +++||.+.|
T Consensus 310 ~~~~l~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p~gg~f~~~~l~~-----------~~~~~L-~~~gV~v~p 377 (405)
T 3k7y_A 310 WIKELSQLSQRITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGLFSFVPLLA-----------KIAEHL-KTHHIYIIN 377 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGGGGSSCCSSEEECGGGG-----------GGTTTT-TTTTEECCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCccccCCceEEEecCCCH-----------HHHHHH-HHCCEeecC
Confidence 234467778889999999999999 776 578889999999988763 334565 789999998
Q ss_pred CCCcCCCCCCeEEEEecCCCcccHHHHHHHHHHHHHH
Q 019899 296 GSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 296 g~~~~~~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
|. |||++..+++++++++++|++++++
T Consensus 378 ~~----------Ris~a~~~~~~i~~~~~~i~~~~~~ 404 (405)
T 3k7y_A 378 NG----------RINVSGITKNNVDYIADKICLSLSQ 404 (405)
T ss_dssp TS----------EEEGGGCCTTHHHHHHHHHHHHHHC
T ss_pred CC----------eEEEeccCHHHHHHHHHHHHHHHhh
Confidence 52 9999878999999999999999875
No 42
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=100.00 E-value=4.9e-42 Score=306.36 Aligned_cols=293 Identities=17% Similarity=0.226 Sum_probs=248.7
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITAL 84 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l 84 (334)
+++.+++.+++++++|++|+|+++++..++.+++++||+|+++.|+|.++...++ ..|.+++.+++ +++++ +|++++
T Consensus 70 lr~~la~~~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~-~~g~~~~~v~~-~~~~~-~d~~~l 146 (365)
T 3get_A 70 LKSTLAQKYKVQNENIIIGAGSDQVIEFAIHSKLNSKNAFLQAGVTFAMYEIYAK-QCGAKCYKTQS-ITHNL-DEFKKL 146 (365)
T ss_dssp HHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHH-HHTCEEEECSS-SSCCH-HHHHHH
T ss_pred HHHHHHHHhCCCcceEEECCCHHHHHHHHHHHHhCCCCEEEEeCCChHHHHHHHH-HcCCEEEEEec-CCCCC-CCHHHH
Confidence 3344444455788999999999999999999999999999999999999999988 89999999998 34567 999999
Q ss_pred HHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEecccccccc--CCCCcchhhhhhhccccC
Q 019899 85 DQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIF--GNEEFVSMAEILEAEEVD 162 (334)
Q Consensus 85 ~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~--~~~~~~~~~~~~~~~~~~ 162 (334)
++++++ ++++|++++|+||||.++|.+++.+++++| ++|+++|+|++|+.+.| .+....+.......
T Consensus 147 ~~~l~~------~~~~v~~~~p~nptG~~~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~---- 215 (365)
T 3get_A 147 YETHKD------EIKLIFLCLPNNPLGECLDASEATEFIKGV-NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKE---- 215 (365)
T ss_dssp HHHTTT------TEEEEEEESSCTTTCCCCCHHHHHHHHHTS-CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHH----
T ss_pred HHHhCC------CCCEEEEcCCCCCCCCCcCHHHHHHHHHhC-CCCcEEEEeCccHHHhcccCCcccccHhHHhcc----
Confidence 999975 899999999999999999999999999988 57999999999998875 44333333333221
Q ss_pred CCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHH
Q 019899 163 KDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSF 242 (334)
Q Consensus 163 ~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 242 (334)
.++++++.|+||.+|++|+|+||+++ ++++.+.++.....++.+++.+.++..+++.. +++.+.+++++++++++
T Consensus 216 ~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~l 290 (365)
T 3get_A 216 FDNVLYLGTFSKLYGLGGLRIGYGIA-NANIISAFYKLRAPFNVSNLALKAAVAAMDDD----EFTEKTLENNFSQMELY 290 (365)
T ss_dssp CTTEEEEEESSSTTSCTTTCCEEEEE-CHHHHHHHHHHSCTTCSCHHHHHHHHHHHTCH----HHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeecchHhcCcchheEEEEc-CHHHHHHHHHhcCCCCcCHHHHHHHHHHhCCH----HHHHHHHHHHHHHHHHH
Confidence 68899999999999999999999999 99999999988888889999999999999864 45677888899999999
Q ss_pred HHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHH
Q 019899 243 VAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLV 322 (334)
Q Consensus 243 ~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~ 322 (334)
.+.|+++|+++..+.+ .++|++++.. +..++...|. ++||.+.||..|+ ++++|++++ ++++++++
T Consensus 291 ~~~l~~~g~~~~~~~~-~~~~~~~~~~-------~~~~~~~~l~-~~gi~v~~g~~~~---~~~iRis~~--~~~~i~~l 356 (365)
T 3get_A 291 KEFAKKHNIKIIDSYT-NFITYFFDEK-------NSTDLSEKLL-KKGIIIRNLKSYG---LNAIRITIG--TSYENEKF 356 (365)
T ss_dssp HHHHHHTTCEECCCSS-SEEEEECSSS-------CHHHHHHHHH-TTTEECEECGGGT---CSEEEEECC--CHHHHHHH
T ss_pred HHHHHhCCCEECCCCC-eEEEEECCCC-------CHHHHHHHHH-HCCEEEEECccCC---CCEEEEEcC--CHHHHHHH
Confidence 9999998888766654 4588998764 2467888855 4799999999887 789999998 89999999
Q ss_pred HHHHHHHH
Q 019899 323 IERIQKVA 330 (334)
Q Consensus 323 l~~l~~~~ 330 (334)
++.|++++
T Consensus 357 ~~~l~~~l 364 (365)
T 3get_A 357 FTEFDKIL 364 (365)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99999876
No 43
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=9.9e-42 Score=304.97 Aligned_cols=292 Identities=24% Similarity=0.419 Sum_probs=246.2
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccH
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
++|+.+..+ +.+++++|++|+|+++++..++.+++++||+|++++|+|+++...++ ..|.+++.++ +|+
T Consensus 76 a~~~~~~~g--~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~-~~g~~~~~v~--------~d~ 144 (370)
T 2z61_A 76 SELYKDKYK--ADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIR-FLGAKPVFCD--------FTV 144 (370)
T ss_dssp HHHHHHHSS--CCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHH-HTTCEEEEEC--------SSH
T ss_pred HHHHHHHhC--CCCChhhEEECCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHH-HcCCEEEEeC--------CCH
Confidence 556655555 56788999999999999999999999999999999999999999988 8999998887 588
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
+++++++++ +++++++++|+||||.++|.+ |.++|+++|+++|+||+|+.+.+++. +.++..+..
T Consensus 145 ~~l~~~l~~------~~~~v~~~~p~nptG~~~~~~----l~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~---- 209 (370)
T 2z61_A 145 ESLEEALSD------KTKAIIINSPSNPLGEVIDRE----IYEFAYENIPYIISDEIYNGLVYEGK-CYSAIEFDE---- 209 (370)
T ss_dssp HHHHHHCCS------SEEEEEEESSCTTTCCCCCHH----HHHHHHHHCSEEEEECTTTTCBSSSC-CCCGGGTCT----
T ss_pred HHHHHhccc------CceEEEEcCCCCCcCcccCHH----HHHHHHHcCCEEEEEcchhhcccCCC-CcCHHHccC----
Confidence 999998865 789999999999999999954 99999999999999999999888653 334444421
Q ss_pred CCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc--cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHH
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLY 239 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (334)
..++++++.|+||.+|++|+|+||+++ ++++.+.++..... ++.+++.+.++..+++.. ..+++.+.++++++++
T Consensus 210 ~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~ 286 (370)
T 2z61_A 210 NLEKTILINGFSKLYAMTGWRIGYVIS-NDEIIEAILKLQQNLFISAPTISQYAALKAFEKE--TEREINSMIKEFDRRR 286 (370)
T ss_dssp TCSSEEEEEESTTTTTCGGGCCEEEEC-CHHHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHH--HHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecChhccCCccceEEEEEE-CHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhcc--CHHHHHHHHHHHHHHH
Confidence 157899999999999989999999998 77888888765443 478888998888888641 1456677888999999
Q ss_pred HHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccH
Q 019899 240 DSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDI 319 (334)
Q Consensus 240 ~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l 319 (334)
+++.+.|++.|+++..+.+|+++|++++. +..++...|++++||.+.||..|+...++++|++++ .+++++
T Consensus 287 ~~l~~~L~~~g~~~~~~~~~~~~~~~~~~--------~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~-~~~~~i 357 (370)
T 2z61_A 287 RLVLKYVKDFGWEVNNPIGAYYVFPNIGE--------DGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA-NSYENI 357 (370)
T ss_dssp HHHHHHHHHTTCBCCCCCBTTEECCBCSS--------CHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECC-SCHHHH
T ss_pred HHHHHHHHHcCCeecCCCcceEEEEecCC--------CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe-CCHHHH
Confidence 99999999888888888889999998875 235788887767899999999887544689999999 799999
Q ss_pred HHHHHHHHHHHH
Q 019899 320 PLVIERIQKVAE 331 (334)
Q Consensus 320 ~~~l~~l~~~~~ 331 (334)
++++++|+++++
T Consensus 358 ~~~~~~l~~~l~ 369 (370)
T 2z61_A 358 KEGLERIKEFLN 369 (370)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHHh
Confidence 999999999875
No 44
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=100.00 E-value=3.3e-42 Score=314.77 Aligned_cols=309 Identities=15% Similarity=0.150 Sum_probs=254.9
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc--CCCC--eEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCc
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLA--DHGN--ALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNF 77 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~--~~gd--~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~ 77 (334)
++++.+..+ +.+++++|++|+|+++++..++.+++ ++|| +|++++|+|.++...++ ..|.+++.++++ ++++
T Consensus 92 a~~~~~~~g--~~~~~~~i~~t~g~t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~-~~g~~~~~v~~~-~~~~ 167 (437)
T 3g0t_A 92 SRFAKLFVN--IDIPARACVPTVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCR-ILGQKFESFDLF-EYRG 167 (437)
T ss_dssp HHHHHHHHC--CCCCGGGEEEESHHHHHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHHHHH-HHTCCCEEEEGG-GGCT
T ss_pred HHHHHHhhC--CCCCcccEEEeCCHHHHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHHHHH-HcCCEEEEEeec-CCCC
Confidence 556665555 66788999999999999999999998 9999 99999999999999998 899999999986 4667
Q ss_pred cccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcc----hh-
Q 019899 78 AFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFV----SM- 152 (334)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~----~~- 152 (334)
.+|++++++++++ .++++|++++|+||||.+++.+++++|+++|++||+++|+|++|+.+.+++.... ++
T Consensus 168 ~~d~~~l~~~l~~-----~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 242 (437)
T 3g0t_A 168 EKLREKLESYLQT-----GQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQ 242 (437)
T ss_dssp THHHHHHHHHHTT-----TCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCC
T ss_pred ccCHHHHHHHHhc-----CCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchh
Confidence 8999999999943 2789999999999999999999999999999999999999999999887632211 01
Q ss_pred hhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHH-H-----------------HHHhh--cccCCChHHHH
Q 019899 153 AEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLA-A-----------------AKKLT--RFCSISAPTQR 212 (334)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~-~-----------------~~~~~--~~~~~~~~~~~ 212 (334)
..+.. ..++++++.|+||.+|++|+|+||+++ ++++.+ . +.... ..++.+++.+.
T Consensus 243 ~~~~~----~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (437)
T 3g0t_A 243 PSVAN----YTDNYILALSSSKAFSYAGQRIGVLMI-SGKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQW 317 (437)
T ss_dssp CCGGG----TCSCEEEEEESTTTTSCGGGCCEEEEE-CHHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHH
T ss_pred hccCC----CCCcEEEEEcCccCCCCccceeEEEEE-CHHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHH
Confidence 22221 167889999999999999999999999 788877 6 65443 34678999999
Q ss_pred HHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc------CC-CceeEEeeecCCcCCCCChhhHHHHHHHH
Q 019899 213 LLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCS------ES-SAGLYCWADMSGLIPSYSEKGELELWDKL 285 (334)
Q Consensus 213 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~------~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (334)
++..++...+..+.++.+.+++++++++++.+.|+++|+++. .+ .+++++|++++. . +..++...|
T Consensus 318 a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~l~~~L 390 (437)
T 3g0t_A 318 GMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDNGFNIVYDKDGNEPLADGFYFTVGYKG-M------DSSKLIEKF 390 (437)
T ss_dssp HHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTTTEEESSCEETTEECCSSSEEEEEETT-C------CHHHHHHHH
T ss_pred HHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHcCCEEeccccCCCCCceeEEEEEecCC-C------CHHHHHHHH
Confidence 998888653211111577888999999999999999888877 34 789999999982 1 346788886
Q ss_pred HHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHHHHHHHHHHH
Q 019899 286 LNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 286 l~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
++ +||.+.|+..|+...++++|++++..+++++++++++|++++++
T Consensus 391 ~~-~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 391 VR-YGMCAITLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp HH-TTEECEESTTTTCCCTTCEEEECSSSCGGGHHHHHHHHHHHHHH
T ss_pred HH-cCeEEeeccccCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 65 79999999988765558899999966999999999999998864
No 45
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=1.3e-41 Score=308.15 Aligned_cols=304 Identities=22% Similarity=0.380 Sum_probs=252.3
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccH
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
++|+.+..+ +++++++|++|+|+++++..++.+++++||+|+++.|+|+++...++ ..|.+++.++.++++++.+ +
T Consensus 89 a~~~~~~~g--~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~-~~g~~~~~v~~~~~~~~~~-~ 164 (409)
T 2gb3_A 89 ASYYKRRQR--VDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAK-IAGVKLIPVTRRMEEGFAI-P 164 (409)
T ss_dssp HHHHHHTSC--CCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHH-HHTCEEEEEECCGGGTSCC-C
T ss_pred HHHHHHHhC--CCCCHHHEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHH-HcCCEEEEeccCCCCCCcc-H
Confidence 455555444 55778999999999999999999999999999999999999999888 8899999999854345555 8
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
++|++++++ +++++++++|+||||.++|.+++++|.++|+++|+++|+||+|+.+.+++. ..+. +.. .
T Consensus 165 ~~l~~~l~~------~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~-~~~~--~~~---~ 232 (409)
T 2gb3_A 165 QNLESFINE------RTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGE-FASA--LSI---E 232 (409)
T ss_dssp TTGGGGCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSC-CCCG--GGS---C
T ss_pred HHHHHhhCc------CCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCC-CCCc--ccc---C
Confidence 888888865 789999999999999999999999999999999999999999999887652 2332 111 1
Q ss_pred CCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhccc-CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFC-SISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYD 240 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (334)
.++++++.|+||.+|++|+|+||++++++++.+.++.....+ +.+++.+.++..+++.. .++++++++++.++++
T Consensus 233 -~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~ 308 (409)
T 2gb3_A 233 -SDKVVVIDSVSKKFSACGARVGCLITRNEELISHAMKLAQGRLAPPLLEQIGSVGLLNLD---DSFFDFVRETYRERVE 308 (409)
T ss_dssp -CTTEEEEEESTTTTTCGGGCCEEEECSCHHHHHHHHHHHHHSCCCCHHHHHHHHHHHTCC---HHHHHHHHHHHHHHHH
T ss_pred -CCCEEEEecchhccCCccceEEEEEECcHHHHHHHHHHHhccCCCCHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHH
Confidence 467899999999999899999999995548888887765555 78889999988888653 3456778888999999
Q ss_pred HHHHHHHhCCCcc-cCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHh-----cCeEEcCCCCcCC---CCCCeEEEEe
Q 019899 241 SFVAGLKQLGIRC-SESSAGLYCWADMSGLIPSYSEKGELELWDKLLNI-----AKINVTPGSACHC---IEPGWFRCCF 311 (334)
Q Consensus 241 ~~~~~l~~~g~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~-----~gi~v~~g~~~~~---~~~~~iRi~~ 311 (334)
++.+.|++.|+++ ..+.+++++|++++. .+..++...|+++ +||.+.||..|+. ..++++|+++
T Consensus 309 ~l~~~L~~~g~~~~~~~~~~~~~~~~~~~-------~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~ 381 (409)
T 2gb3_A 309 TVLKKLEEHGLKRFTKPSGAFYITAELPV-------EDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIAC 381 (409)
T ss_dssp HHHHHHHHTTCCCBCCCSBSSEEEEECSS-------SCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEEC
T ss_pred HHHHHHHHcCceeeeCCCeeEEEEEEeCC-------CCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEe
Confidence 9999999888888 778889999999872 1346788887765 5999999988864 2367999999
Q ss_pred cCCCcccHHHHHHHHHHHHHHc
Q 019899 312 TSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 312 ~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
+ .+++++++++++|+++++++
T Consensus 382 ~-~~~e~i~~~~~~l~~~l~~~ 402 (409)
T 2gb3_A 382 V-LEKDLLSRAIDVLMEGLKMF 402 (409)
T ss_dssp C-SCHHHHHHHHHHHHHHHHHH
T ss_pred C-CCHHHHHHHHHHHHHHHHHh
Confidence 9 89999999999999998764
No 46
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=3.5e-42 Score=309.07 Aligned_cols=301 Identities=23% Similarity=0.415 Sum_probs=249.5
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCC-CCCccccHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRS-TDNFAFSITA 83 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~-~~~~~~~~~~ 83 (334)
+++.+++.+++++++|++|+|+++++..++.+++++||+|+++.|+|+++...++ ..|.+++.++++. .+++.+|+++
T Consensus 66 l~~~la~~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~-~~g~~~~~v~~~~~~~~~~~d~~~ 144 (381)
T 1v2d_A 66 LREALAEEFAVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAF-LAGAKARLVRLDLTPEGFRLDLSA 144 (381)
T ss_dssp HHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHH-HTTCEEEEEECEEETTEEECCHHH
T ss_pred HHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHH-HcCCEEEEEeCCCCCccCCcCHHH
Confidence 4444545566778899999999999999999999999999999999999999888 8999999999741 1346899999
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCC
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDK 163 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (334)
+++++++ ++++|++++|+||||.++|.+++++|+++|++||+++|+|++|+.+.+ +....++..+ . .
T Consensus 145 l~~~l~~------~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~-~-----~ 211 (381)
T 1v2d_A 145 LEKALTP------RTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYY-GERPRRLREF-A-----P 211 (381)
T ss_dssp HHTTCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHH-C-----T
T ss_pred HHHhcCc------CCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHh-c-----C
Confidence 9998864 789999999999999999999999999999999999999999999887 4444455544 2 6
Q ss_pred CcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 019899 164 DRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDS 241 (334)
Q Consensus 164 ~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 241 (334)
+.++++.|+||.++++|+|+||+++ ++++++.++.... .++.+++.+.++..++.... ..+++++.++++++++++
T Consensus 212 ~~~~~~~s~sK~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~~ 289 (381)
T 1v2d_A 212 ERTFTVGSAGKRLEATGYRVGWIVG-PKEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLAR-REGFYEALREGYRRRRDL 289 (381)
T ss_dssp TTEEEEEEHHHHTTCGGGCCEEEEC-CTTTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHH-HTTHHHHHHHHHHHHHHH
T ss_pred CCEEEEeechhhcCCcccceEEEEe-CHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHHHH
Confidence 7899999999999989999999998 7788888775443 56788888888888876432 144567788899999999
Q ss_pred HHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCC--CCCCeEEEEecCCCcccH
Q 019899 242 FVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHC--IEPGWFRCCFTSLTHEDI 319 (334)
Q Consensus 242 ~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~--~~~~~iRi~~~~~~~~~l 319 (334)
+.+.|++.|+++..+.+++++|++++.. + ...+++++||.+.||..|+. ..++++|++++. +++++
T Consensus 290 l~~~L~~~g~~~~~~~~~~~~~~~~~~~----------~-~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~-~~~~i 357 (381)
T 1v2d_A 290 LAGGLRAMGLRVYVPEGTYFLMAELPGW----------D-AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK-TEEEL 357 (381)
T ss_dssp HHHHHHHTTCCEECCSBSSEEEEECTTC----------C-HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS-CHHHH
T ss_pred HHHHHHHCCCEecCCCcceEEEEecChH----------h-HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC-CHHHH
Confidence 9999999899888888889999998752 1 44557779999999988864 246799999995 89999
Q ss_pred HHHHHHHHHHHHHc
Q 019899 320 PLVIERIQKVAETC 333 (334)
Q Consensus 320 ~~~l~~l~~~~~~~ 333 (334)
++++++|++++++.
T Consensus 358 ~~~~~~l~~~l~~~ 371 (381)
T 1v2d_A 358 HLALERLGRVVNSP 371 (381)
T ss_dssp HHHHHHHHHHC---
T ss_pred HHHHHHHHHHHhhc
Confidence 99999999988654
No 47
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=4.6e-42 Score=314.86 Aligned_cols=292 Identities=18% Similarity=0.256 Sum_probs=245.3
Q ss_pred CCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcE----------EEEEeCCCCCCccccHH
Q 019899 13 VSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVE----------LIPVHCRSTDNFAFSIT 82 (334)
Q Consensus 13 ~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~----------v~~v~~~~~~~~~~~~~ 82 (334)
+++++++|++|+|+++++..+ ..++++||+|++++|+|.++...++ ..|.+ ++.+++++++++..+++
T Consensus 128 ~~~~~~~i~~t~G~~~al~~~-~~l~~~gd~Vl~~~p~~~~~~~~~~-~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (449)
T 3qgu_A 128 AGRAADEIFISDGSKCDIARI-QMMFGSKPTVAVQDPSYPVYVDTSV-MMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLS 205 (449)
T ss_dssp TTCCGGGEEEESCHHHHHHHH-HHHHCSSSCEEEEESCCTHHHHHHH-HHTCSCCBCSSSBTTEEEEECCGGGTTCCCGG
T ss_pred CCCCHHHEEEccCHHHHHHHH-HHHhCCCCEEEEcCCCChhHHHHHH-HcCCcccccccccceeEEEecccccCCcCChh
Confidence 577889999999999999998 8888999999999999999999998 88988 99999865556666654
Q ss_pred HHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccC
Q 019899 83 ALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVD 162 (334)
Q Consensus 83 ~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (334)
++ .++++|++++|+||||.+++.+++++|+++|++||+++|+||+|+++.+++....++..+...
T Consensus 206 ~~-----------~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~---- 270 (449)
T 3qgu_A 206 KA-----------KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGA---- 270 (449)
T ss_dssp GC-----------CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTG----
T ss_pred Hc-----------CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCC----
Confidence 32 278999999999999999999999999999999999999999999999876655566555331
Q ss_pred CCcEEEEecccccCCCCCceEEEEeecCHHHHH--------HHHHh--hcccCCChHHHHHHHHhhCChHHHHHHHHHHH
Q 019899 163 KDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLA--------AAKKL--TRFCSISAPTQRLLISMLSDTKFIQEYLETNK 232 (334)
Q Consensus 163 ~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~--------~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 232 (334)
.++++++.|+||.+|++|+|+||+++ ++++++ .+... ..+++.+++.+.++..++.... .+++.+++
T Consensus 271 ~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~ 347 (449)
T 3qgu_A 271 DEVAIETCSFSKYAGFTGVRLGWTVV-PKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEG--LKEMNAMI 347 (449)
T ss_dssp GGTEEEEEECSGGGTCTTCCCEEEEC-CTTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHH--HHHHHHHH
T ss_pred CCcEEEEecchhhcCCccceeEEEec-CHHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcC--HHHHHHHH
Confidence 57789999999999999999999998 555443 33332 2334678899999888887532 35678888
Q ss_pred HHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEec
Q 019899 233 RRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFT 312 (334)
Q Consensus 233 ~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~ 312 (334)
++++++++++.+.|++.|+++..+.+++++|++++ .. +..+++..|++++||.+.||..|+...++++||++.
T Consensus 348 ~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~-~~------~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~ 420 (449)
T 3qgu_A 348 KFYKENAQILKTTFTEMGFSVYGGDDAPYIWVGFP-GK------PSWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAF 420 (449)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEESSSSSEEEEECT-TS------CHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC
T ss_pred HHHHHHHHHHHHHHHHCCCeeeCCCCeeEEEEECC-CC------CHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEec
Confidence 99999999999999999999888888999999998 22 346888898887899999999998767899999987
Q ss_pred CCCcccHHHHHHHHHHHHHH
Q 019899 313 SLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 313 ~~~~~~l~~~l~~l~~~~~~ 332 (334)
.+++++++++++|++++++
T Consensus 421 -~~~e~i~~~l~~l~~~~~~ 439 (449)
T 3qgu_A 421 -GSRENILEAVRRFKEAYGK 439 (449)
T ss_dssp -SCHHHHHHHHHHHHHHHC-
T ss_pred -CCHHHHHHHHHHHHHHHHh
Confidence 5999999999999999875
No 48
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=100.00 E-value=1.3e-40 Score=297.42 Aligned_cols=288 Identities=18% Similarity=0.281 Sum_probs=245.7
Q ss_pred hhcCCCCC-CCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHH
Q 019899 8 VLGQAVSF-DPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQ 86 (334)
Q Consensus 8 ~~~~~~~~-~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~ 86 (334)
.+++.+++ ++++|++|+|+++++..++.+++++||+|++++|+|.++...++ ..|.+++.++++ .++.+|++++++
T Consensus 75 ~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~-~~g~~~~~v~~~--~~~~~d~~~l~~ 151 (367)
T 3euc_A 75 KLKEVMQVPAGMEVLLGNGSDEIISMLALAAARPGAKVMAPVPGFVMYAMSAQ-FAGLEFVGVPLR--ADFTLDRGAMLA 151 (367)
T ss_dssp HHHHHHTCCTTCEEEEEEHHHHHHHHHHHHTCCTTCEEEEEESCSCCSCHHHH-TTTCEEEEEECC--TTSCCCHHHHHH
T ss_pred HHHHHhCCCCcceEEEcCCHHHHHHHHHHHHcCCCCEEEEcCCCHHHHHHHHH-HcCCeEEEecCC--CCCCCCHHHHHH
Confidence 33333445 67899999999999999999999999999999999999999998 899999999984 467899999999
Q ss_pred HHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc--CcEEEEeccccccccCCCCcchhhhhhhccccCCC
Q 019899 87 AFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK--NIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKD 164 (334)
Q Consensus 87 ~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~--~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (334)
++++. ++++|++++|+||||.+++.+++++|+++|++| |+++|+|++|+.+...+ ... .+.. .+
T Consensus 152 ~l~~~-----~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~--~~~--~~~~-----~~ 217 (367)
T 3euc_A 152 AMAEH-----QPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQES--WMS--RLTD-----FG 217 (367)
T ss_dssp HHHHH-----CCSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCC--SGG--GGGT-----CT
T ss_pred Hhhcc-----CCCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccc--hHH--HHhh-----CC
Confidence 99874 789999999999999999999999999999999 99999999999866432 222 1221 67
Q ss_pred cEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHH
Q 019899 165 RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVA 244 (334)
Q Consensus 165 ~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (334)
+++++.|+||. +++|+|+||+++ ++++.+.++.....++.+++.+.++..+++. .+++.+.+++++++++++.+
T Consensus 218 ~~i~~~s~sK~-~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~l~~ 291 (367)
T 3euc_A 218 NLLVMRTVSKL-GLAGIRLGYVAG-DPQWLEQLDKVRPPYNVNVLTEATALFALEH----VAVLDEQAAQLRAERSRVAE 291 (367)
T ss_dssp TEEEEEECCCT-TSCSCCEEEEEE-CHHHHHHHGGGCCSSCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEecchhh-cccccCceeeee-CHHHHHHHHHhCCCCCCCHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHH
Confidence 88999999999 889999999999 8999999988877888999999999999987 34567778889999999999
Q ss_pred HHHhC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHH
Q 019899 245 GLKQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVI 323 (334)
Q Consensus 245 ~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l 323 (334)
.|+++ |+++. +..+.++|++++ +..++... ++++||.+.||..|+...++++|++++ +++++++++
T Consensus 292 ~l~~~~g~~~~-~~~~~~~~~~~~---------~~~~l~~~-l~~~gi~v~~~~~~~~~~~~~iRis~~--~~~~i~~~~ 358 (367)
T 3euc_A 292 GMAAHGGVTVF-PSAANFLLARVP---------DAAQTFDR-LLARKVLIKNVSKMHPLLANCLRVTVS--TPEENAQFL 358 (367)
T ss_dssp HHHTSTTCEEC-CCSSSEEEEECS---------CHHHHHHH-HHTTTEECEECGGGCGGGTTEEEEECC--CHHHHHHHH
T ss_pred HHHhCCCcEEC-CCCCeEEEEECC---------CHHHHHHH-HHHCCeEEEECCccCCCCCCEEEEecC--CHHHHHHHH
Confidence 99988 88854 456677888887 13567777 566899999999887666789999998 899999999
Q ss_pred HHHHHHHH
Q 019899 324 ERIQKVAE 331 (334)
Q Consensus 324 ~~l~~~~~ 331 (334)
+.|+++++
T Consensus 359 ~~l~~~l~ 366 (367)
T 3euc_A 359 EAFAASLQ 366 (367)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHhc
Confidence 99998864
No 49
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=100.00 E-value=2.3e-40 Score=300.82 Aligned_cols=291 Identities=17% Similarity=0.256 Sum_probs=238.9
Q ss_pred cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCce
Q 019899 19 QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKV 98 (334)
Q Consensus 19 ~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 98 (334)
+|++|+|+++++..++.+++++||+|+++.|+|.++...++ ..|.+++.+|+.+++ +.+|++++++++++.... ++
T Consensus 104 ~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~-~~g~~~~~v~~~~~~-~~~d~~~l~~~l~~~~~~--~~ 179 (418)
T 3rq1_A 104 RSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYRVICS-DTGRTLVTYSLFDEH-NNFNHEAFQNRVNELAAK--QT 179 (418)
T ss_dssp EEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHHHHHH-HTTCEEEEECSBCTT-SSBCHHHHHHHHHHHHHH--CS
T ss_pred cEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHHHHHH-HcCCEEEEEeeeCCC-CCcCHHHHHHHHHHhhcc--CC
Confidence 99999999999999999999999999999999999999998 899999999985433 689999999999863211 34
Q ss_pred e-EEEEeCC-CCCcccCCCHHHHHHHHHHHH------hcCcEEEEeccccccccCCCCcchhhhhhhccccCCCc--EEE
Q 019899 99 R-GILICNP-ANPVGNIIPRETLYELLDFAR------EKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDR--VHI 168 (334)
Q Consensus 99 ~-~i~~~~p-~nptG~~~~~~~l~~i~~~~~------~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 168 (334)
+ ++++++| +||||.+++.+++++|+++|+ +||+++|+||+|.++.+.+....++..... ++ .++ +++
T Consensus 180 ~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~--~~-~~~~~~i~ 256 (418)
T 3rq1_A 180 NVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFS--HL-PKEILTCV 256 (418)
T ss_dssp EEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGT--TC-CTTEEEEE
T ss_pred CEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHH--hc-CCCceEEE
Confidence 4 7889999 999999999999999999999 899999999999998876433333322221 11 233 588
Q ss_pred EecccccCCCCCceEEEEee--cCHHHHHHHHHhhc------ccCCChHHHHHHHHhhCChHHH---HHHHHHHHHHHHH
Q 019899 169 IYGLSKDLSLPGFRTGVIYS--YNESVLAAAKKLTR------FCSISAPTQRLLISMLSDTKFI---QEYLETNKRRIKK 237 (334)
Q Consensus 169 ~~s~sK~~~~~g~r~g~i~~--~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~ 237 (334)
+.|+||.+|++|+|+||+++ +++++++.+..... +.+.+...+.++..++...++. .+...++++++++
T Consensus 257 ~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~ 336 (418)
T 3rq1_A 257 CYSLSKGFTMYGQRVGAMIGISDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRD 336 (418)
T ss_dssp EEESTTTTTCCSSCCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCcCcCCcceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999987 47888888876432 2357889999999999886422 3344567788999
Q ss_pred HHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcc
Q 019899 238 LYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHE 317 (334)
Q Consensus 238 ~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~ 317 (334)
+++.+.+.|+++|+++..+.+++++|++++ +..++... ++++||.+.||. +++|++++..+++
T Consensus 337 ~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~---------~~~~~~~~-l~~~gi~v~~g~-------~~iRis~~~~~~~ 399 (418)
T 3rq1_A 337 RADIFKQEAAQVGLPMLPYRGGFFITIPTD---------SANAICEE-LKKEHIYVIALA-------NGIRIAACGIPKC 399 (418)
T ss_dssp HHHHHHHHHHHHTCCCCCCCSSSEEEEECT---------THHHHHHH-HHHTTEECEECS-------SEEEEEGGGSCHH
T ss_pred HHHHHHHHHHhcCCCCCCCCceEEEEcCCC---------CHHHHHHH-HHhCCEEEecCC-------CCeEEEEecCCHH
Confidence 999999999988999989999999998774 23577776 567899999973 5799998866999
Q ss_pred cHHHHHHHHHHHHHHc
Q 019899 318 DIPLVIERIQKVAETC 333 (334)
Q Consensus 318 ~l~~~l~~l~~~~~~~ 333 (334)
++++++++|++++++.
T Consensus 400 ~i~~~~~~l~~~l~~~ 415 (418)
T 3rq1_A 400 QMTGLAEKIYNAMKSL 415 (418)
T ss_dssp HHTTHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999875
No 50
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=100.00 E-value=9.2e-41 Score=297.90 Aligned_cols=291 Identities=18% Similarity=0.241 Sum_probs=246.4
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITAL 84 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l 84 (334)
+++.+++.+++++++|++|+|+++++..++.+++++||+|+++.|+|.++...++ ..|.+++.++.++ ++.+|++++
T Consensus 72 lr~~la~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~-~~g~~~~~v~~~~--~~~~d~~~l 148 (363)
T 3ffh_A 72 LRKEVADFYQLEEEELIFTAGVDELIELLTRVLLDTTTNTVMATPTFVQYRQNAL-IEGAEVREIPLLQ--DGEHDLEGM 148 (363)
T ss_dssp HHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCSTTCEEEEEESSCHHHHHHHH-HHTCEEEEEECCT--TSCCCHHHH
T ss_pred HHHHHHHHhCCChhhEEEeCCHHHHHHHHHHHHccCCCEEEEcCCChHHHHHHHH-HcCCEEEEecCCC--CCCcCHHHH
Confidence 3444444455788999999999999999999999999999999999999999988 8999999999843 578999999
Q ss_pred HHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCC
Q 019899 85 DQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKD 164 (334)
Q Consensus 85 ~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (334)
++++++ +++++++++|+||||.++|.+++.++++.|++ |+++|+|++|+++.+ +........... .+
T Consensus 149 ~~~i~~------~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~-~~~li~De~~~~~~~-~~~~~~~~~~~~-----~~ 215 (363)
T 3ffh_A 149 LNAIDE------KTTIVWICNPNNPTGNYIELADIQAFLDRVPS-DVLVVLDEAYIEYVT-PQPEKHEKLVRT-----YK 215 (363)
T ss_dssp HHHCCT------TEEEEEEESSCTTTCCCCCHHHHHHHHTTSCT-TSEEEEECTTGGGCS-SCCCCCGGGGGT-----CT
T ss_pred HHhccc------CCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCC-CcEEEEeCchHhhcC-ccccCHHHHhhc-----CC
Confidence 999975 79999999999999999998888888888877 999999999998877 433222222222 68
Q ss_pred cEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHH
Q 019899 165 RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVA 244 (334)
Q Consensus 165 ~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (334)
+++++.|+||.+|++|+|+||+++ ++++.+.++.....++.+++.+.++..++... +++.+.+++++++++++.+
T Consensus 216 ~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~l~~ 290 (363)
T 3ffh_A 216 NLIITRTFSKIYGLASARVGYGIA-DKEIIRQLNIVRPPFNTTSIGQKLAIEAIKDQ----AFIGECRTSNANGIKQYEA 290 (363)
T ss_dssp TEEEEEESSSTTCCSSCCCEEEEE-CHHHHHHHHHTCCSCCCBHHHHHHHHHHHHCH----HHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEeechhhhcCchhceeeeec-CHHHHHHHHHhCCCCCCCHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999 99999999988888899999999999998753 4567788889999999999
Q ss_pred HHHh-CCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHH
Q 019899 245 GLKQ-LGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVI 323 (334)
Q Consensus 245 ~l~~-~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l 323 (334)
.|++ .|+++..+. +.++|++++. +..++...|. ++||.+.||..|+. ++++|++++ +++++++++
T Consensus 291 ~l~~~~g~~~~~~~-~~~~~~~~~~--------~~~~~~~~l~-~~gi~v~~g~~~~~--~~~iRis~~--~~~~i~~~~ 356 (363)
T 3ffh_A 291 FAKRFEKVKLYPAN-GNFVLIDLGI--------EAGTIFSYLE-KNGYITRSGAALGF--PTAVRITIG--KEEDNSAVI 356 (363)
T ss_dssp HHHHCTTCEECCCC-SSEEEEECSS--------CHHHHHHHHH-HTTEECEETTTTTC--TTEEEEECC--CHHHHHHHH
T ss_pred HHhhCCCceECCCC-CeEEEEECCC--------CHHHHHHHHH-HCCeEEEeCccCCC--CCeEEEECC--CHHHHHHHH
Confidence 9999 688876554 5568898874 2457888855 57999999998875 789999998 899999999
Q ss_pred HHHHHHH
Q 019899 324 ERIQKVA 330 (334)
Q Consensus 324 ~~l~~~~ 330 (334)
+.|++++
T Consensus 357 ~~l~~~l 363 (363)
T 3ffh_A 357 ALLEKLL 363 (363)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 9998763
No 51
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=100.00 E-value=8.6e-41 Score=297.30 Aligned_cols=289 Identities=23% Similarity=0.347 Sum_probs=239.8
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCC-CeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHG-NALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITA 83 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~g-d~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~ 83 (334)
+++.+++.+++++++|++|+|+++++..++.+++++| |+|+++.|+|+++...++ ..|.+++.+|++ +++.+|+++
T Consensus 63 lr~~la~~~~~~~~~v~~~~G~~~ai~~~~~~~~~~g~d~Vl~~~p~~~~~~~~~~-~~g~~~~~v~~~--~~~~~d~~~ 139 (356)
T 1fg7_A 63 VIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAE-TIGVECRTVPTL--DNWQLDLQG 139 (356)
T ss_dssp HHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHHHHHH-HHTCEEEECCCC--TTSCCCHHH
T ss_pred HHHHHHHHhCCChHHEEEcCCHHHHHHHHHHHHhCCCCCEEEEeCCChHHHHHHHH-HcCCEEEEeeCC--CCCCCCHHH
Confidence 4445555556788999999999999999999999999 999999999999999988 889999999874 456789999
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCC
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDK 163 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (334)
++++++ +++++++++|+||||.++|.+++++++++|+ +|+++|+||+|+++.. ..++..+.. ..
T Consensus 140 l~~~i~-------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~----~~~~~~~~~----~~ 203 (356)
T 1fg7_A 140 ISDKLD-------GVKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCP----QASLAGWLA----EY 203 (356)
T ss_dssp HHTSCT-------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSG----GGCSGGGTT----TC
T ss_pred HHHHhc-------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcC----CCcHHHHHh----hC
Confidence 988774 5789999999999999999999999999999 9999999999998652 122223222 15
Q ss_pred CcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHH
Q 019899 164 DRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFV 243 (334)
Q Consensus 164 ~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (334)
++++++.|+||.+|++|+|+||+++ ++++++.++.....++.|++.+.++.+++...++ +++.+.+++++++++++.
T Consensus 204 ~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~l~ 280 (356)
T 1fg7_A 204 PHLAILRTLSKAFALAGLRCGFTLA-NEEVINLLMKVIAPYPLSTPVADIAAQALSPQGI--VAMRERVAQIIAEREYLI 280 (356)
T ss_dssp TTEEEEEESSSTTCCGGGCCEEEEE-CHHHHHHHHHHSCSSCSCHHHHHHHHHHTSHHHH--HHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEecchHhhcCchhhhEEEEe-CHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCccH--HHHHHHHHHHHHHHHHHH
Confidence 7889999999999999999999999 8899999988877788999999999999875432 246788889999999999
Q ss_pred HHHHhCC-CcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcC-CCCcCCCCCCeEEEEecCCCcccHHH
Q 019899 244 AGLKQLG-IRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTP-GSACHCIEPGWFRCCFTSLTHEDIPL 321 (334)
Q Consensus 244 ~~l~~~g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~-g~~~~~~~~~~iRi~~~~~~~~~l~~ 321 (334)
+.|++++ +....+.+++++|++++ +..++...| .++||.+.| |..|+. ++++|++++ +++++++
T Consensus 281 ~~L~~~~~~~~~~~~~~~~~~~~~~---------~~~~l~~~L-~~~gI~v~~~g~~~~~--~~~iRis~~--~~~e~~~ 346 (356)
T 1fg7_A 281 AALKEIPCVEQVFDSETNYILARFK---------ASSAVFKSL-WDQGIILRDQNKQPSL--SGCLRITVG--TREESQR 346 (356)
T ss_dssp HHHHHSTTEEEECCCSSSEEEEEET---------THHHHHHHH-HHTTEECEECTTSTTC--TTEEEEECC--CHHHHHH
T ss_pred HHHHhCCCceEECCCCCeEEEEECC---------CHHHHHHHH-HHCCEEEEECCCCCCC--CCeEEEEeC--CHHHHHH
Confidence 9999885 22334556778899986 235788885 668999999 887764 569999998 6889999
Q ss_pred HHHHHHHH
Q 019899 322 VIERIQKV 329 (334)
Q Consensus 322 ~l~~l~~~ 329 (334)
++++|+++
T Consensus 347 ~~~~l~~~ 354 (356)
T 1fg7_A 347 VIDALRAE 354 (356)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHhh
Confidence 99988753
No 52
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=7.5e-41 Score=304.89 Aligned_cols=308 Identities=13% Similarity=0.160 Sum_probs=247.8
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHH--HHHHHHhcC--C----------CCeEEecCCCCCChhhhhhhccCcEEEEEe
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAV--EILCFCLAD--H----------GNALLVPSPYYPGFDRDIRFRTGVELIPVH 70 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~--~~~~~~l~~--~----------gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~ 70 (334)
+++.+++.+++++++|++|+|+++++ ++++.++++ + ||+|++++|+|.++...++ ..|.+++.+|
T Consensus 83 lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~-~~g~~~~~v~ 161 (427)
T 3ppl_A 83 IRQIWADLLGVPVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITE-RFGFEMISVP 161 (427)
T ss_dssp HHHHHHHHHTSCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHH-HTTCEEEEEE
T ss_pred HHHHHHHHhCCCcceEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHH-HcCCEEEEeC
Confidence 34444444567889999999999999 588888876 5 8999999999999999998 8999999999
Q ss_pred CCCCCCccccHHHHHHHHHHHHHcCCceeEEEEe-CCCCCcccCCCHHHHHHHHHHH-HhcCcEEEEeccccccccCCCC
Q 019899 71 CRSTDNFAFSITALDQAFNQARKRGVKVRGILIC-NPANPVGNIIPRETLYELLDFA-REKNIHVISDEIYGGSIFGNEE 148 (334)
Q Consensus 71 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~-~p~nptG~~~~~~~l~~i~~~~-~~~~~~vi~D~~~~~~~~~~~~ 148 (334)
+++ .++|+++|++++++ .++++|+++ +|+||||.++|.+++++|+++| +++|++||+||+|+.+.|.+..
T Consensus 162 ~~~---~g~d~~~l~~~l~~-----~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~ 233 (427)
T 3ppl_A 162 MNE---DGPDMDAVEELVKN-----PQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEF 233 (427)
T ss_dssp EET---TEECHHHHHHHTTS-----TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCC
T ss_pred CCC---CCCCHHHHHHHHhc-----CCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCC
Confidence 853 24999999999853 278877765 6799999999999999999999 9999999999999998776543
Q ss_pred --cchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCChHHH
Q 019899 149 --FVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDTKFI 224 (334)
Q Consensus 149 --~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~ 224 (334)
..++..+....+ ..++++++.|+||. +++|+|+||+++ ++++++.+..... .++.+++.|.++..++...+.+
T Consensus 234 ~~~~~~~~~~~~~~-~~~~~i~~~S~SK~-~~~G~r~G~~~~-~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~ 310 (427)
T 3ppl_A 234 PEVIDIVGLGEAAG-NPNRFWAFTSTSKI-TLAGAGVSFFLT-SAENRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEGV 310 (427)
T ss_dssp CCCCCHHHHHHHTT-CTTSEEEEEESTTT-SCTTSSCEEEEC-CHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHH
T ss_pred CCccchhhhhhccC-CCCcEEEEechhhc-cCcCccEEEEEc-CHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhChhhH
Confidence 335555421001 16889999999999 569999999998 7888888876543 4678899999999999884444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh----C-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcC-CCC
Q 019899 225 QEYLETNKRRIKKLYDSFVAGLKQ----L-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTP-GSA 298 (334)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~l~~----~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~-g~~ 298 (334)
.+++.+.++.++++++.+.+.|.+ . ++.+..+.+|+++|++++.. +..++... ++++||.+.| |..
T Consensus 311 ~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~-------~~~~~~~~-l~~~gv~v~~~g~~ 382 (427)
T 3ppl_A 311 RAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDVVPG-------TASRVAEL-AKEAGIALTGAGSS 382 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBSSCEEEECSTT-------CHHHHHHH-HHHTTEECCCTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCccEEEEEECCcc-------hHHHHHHH-HHHCCCEEecCcCc
Confidence 677788888888888888887755 2 46777888999999999863 23566666 5668999999 556
Q ss_pred cCC---CCCCeEEEEecCCCcccHHHHHHHHHHHHHH
Q 019899 299 CHC---IEPGWFRCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 299 ~~~---~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
|+. ..++++|++++..+++++++++++|++++++
T Consensus 383 ~~~~~~~~~~~~Ris~~~~~~~~i~~~~~~l~~~l~~ 419 (427)
T 3ppl_A 383 YPLRQDPENKNLRLAPSLPPVEELEVAMDGVATCVLL 419 (427)
T ss_dssp SGGGCCTTSCEEEECCSSSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCeEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 653 2468999999855889999999999999865
No 53
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=100.00 E-value=2.3e-40 Score=301.18 Aligned_cols=308 Identities=13% Similarity=0.170 Sum_probs=242.1
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHH--HHHHHHhcCC------------CCeEEecCCCCCChhhhhhhccCcEEEEEe
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAV--EILCFCLADH------------GNALLVPSPYYPGFDRDIRFRTGVELIPVH 70 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~--~~~~~~l~~~------------gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~ 70 (334)
+++.+++.+++++++|++|+|+++++ .+++..+..+ +|+|++++|+|+++...++ ..|.+++.+|
T Consensus 81 lr~~ia~~~~~~~~~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~-~~g~~~~~v~ 159 (422)
T 3d6k_A 81 IRELWAEALGLPADLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITE-HFGFEMINVP 159 (422)
T ss_dssp HHHHHHHHHTCCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHH-HHTCEEEEEE
T ss_pred HHHHHHHHhCCChhHEEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHHHHH-HcCCEEEecC
Confidence 44444444567889999999999997 6777777655 3479999999999999998 8899999999
Q ss_pred CCCCCCccccHHHHHHHHHHHHHcCCceeEEE-EeCCCCCcccCCCHHHHHHHHHHHH-hcCcEEEEeccccc--cccCC
Q 019899 71 CRSTDNFAFSITALDQAFNQARKRGVKVRGIL-ICNPANPVGNIIPRETLYELLDFAR-EKNIHVISDEIYGG--SIFGN 146 (334)
Q Consensus 71 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~-~~~p~nptG~~~~~~~l~~i~~~~~-~~~~~vi~D~~~~~--~~~~~ 146 (334)
+++ + ++|++++++++++. ++++|+ +++|+||||.++|.+++++|+++|+ ++|++||+||+|+. +.+++
T Consensus 160 ~~~-~--g~d~~~l~~~l~~~-----~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~ 231 (422)
T 3d6k_A 160 MTD-E--GPDMGVVRELVKDP-----QVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEF 231 (422)
T ss_dssp EET-T--EECHHHHHHHHTST-----TEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCC
T ss_pred CCC-C--CCCHHHHHHHHhcC-----CCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCC
Confidence 843 2 49999999998642 688888 6889999999999999999999999 99999999999986 44433
Q ss_pred CCcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc--cCCChHHHHHHHHhhCChHHH
Q 019899 147 EEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--CSISAPTQRLLISMLSDTKFI 224 (334)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~ 224 (334)
..+.++..+....+ ..++++++.||||. +++|+|+||+++ ++++++.+...... ++.+++.|.++..+++....+
T Consensus 232 ~~~~~~~~~~~~~~-~~~~~i~~~S~SK~-~~~GlriG~~~~-~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~ 308 (422)
T 3d6k_A 232 PIVHNVIEFAQAAG-NPNRFWFMSSTSKI-THAGSGVSFFAS-SKENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAGL 308 (422)
T ss_dssp CCCCCHHHHHHHTT-CTTCEEEEEESTTT-SCTTSSCEEEEC-CHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHH
T ss_pred CCCcChhhHhhccC-CCCcEEEEcChhhh-cCcccceEEEEe-CHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCcchH
Confidence 33445533310001 16789999999998 569999999998 78898888776543 568999999999999873334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh----CC-CcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcC-CCC
Q 019899 225 QEYLETNKRRIKKLYDSFVAGLKQ----LG-IRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTP-GSA 298 (334)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~l~~----~g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~-g~~ 298 (334)
.+++.+.++.++++++.+.+.|.+ .+ +.+..|.+|+|+|++++.. +..++.. +++++||.+.| |..
T Consensus 309 ~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~-------~~~~~~~-~l~~~gV~v~~~g~~ 380 (422)
T 3d6k_A 309 KAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVPG-------TASRVVE-LAKEAGIALTGAGSS 380 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCCSBSSCEEEEESTT-------CHHHHHH-HHHHTTEECCCTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCCCcceEEEEECCCC-------CHHHHHH-HHHHCCeEEEcCccc
Confidence 667788888888888888888765 33 5667788999999999853 2334555 47779999999 555
Q ss_pred cCCC---CCCeEEEEecCCCcccHHHHHHHHHHHHHH
Q 019899 299 CHCI---EPGWFRCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 299 ~~~~---~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
|+.. .++++|++++..+++++++++++|++++++
T Consensus 381 f~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~ 417 (422)
T 3d6k_A 381 FPLHNDPNNENIRLAPSLPPVAELEVAMDGFATCVLM 417 (422)
T ss_dssp SGGGCCTTSCEEEECCSSSCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCeEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 6421 357999999866899999999999999875
No 54
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=100.00 E-value=8e-40 Score=296.82 Aligned_cols=291 Identities=19% Similarity=0.294 Sum_probs=236.1
Q ss_pred CCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcC
Q 019899 16 DPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRG 95 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~ 95 (334)
++++|++|+|+++++..++.+++++||+|+++.|+|+++...++ ..|.+++.+|+.+++ +.+|++++++++++....
T Consensus 100 ~~~~i~~t~g~~~al~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~-~~~d~~~l~~~l~~~~~~- 176 (413)
T 3t18_A 100 GYISAIATPGGTGAIRSAIFSYLDEGDPLICHDYYWAPYRKICE-EFGRNFKTFEFFTDD-FAFNIDVYKEAIDEGIRD- 176 (413)
T ss_dssp SEEEEEEESHHHHHHHHHHHHHCCSSCEEEEESSCCTHHHHHHH-HHTCEEEEECCBCTT-SSBCHHHHHHHHHHHHHH-
T ss_pred ccCcEEEcCccHHHHHHHHHHhcCCCCEEEECCCCcccHHHHHH-HhCCeEEEeeccCCC-CCcCHHHHHHHHHHHhhc-
Confidence 34499999999999999999999999999999999999999998 899999999985433 789999999999763211
Q ss_pred Ccee-EEEEeCC-CCCcccCCCHHHHHHHHHHHH------hcCcEEEEeccccccccCCCCcchhhhhhhccccCCCc--
Q 019899 96 VKVR-GILICNP-ANPVGNIIPRETLYELLDFAR------EKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDR-- 165 (334)
Q Consensus 96 ~~~~-~i~~~~p-~nptG~~~~~~~l~~i~~~~~------~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 165 (334)
+++ ++++++| +||||.+++.+++++|+++|+ +||++||+||+|.++.+.+....++..... ++ .++
T Consensus 177 -~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~--~~-~~~~~ 252 (413)
T 3t18_A 177 -SDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFS--NL-PRNLF 252 (413)
T ss_dssp -CSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGT--TC-CTTEE
T ss_pred -CCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHh--hc-CCCee
Confidence 355 7888999 999999999999999999999 899999999999999987654444433322 11 233
Q ss_pred EEEEecccccCCCCCceEEEEeec--CHHHHHHHHHhhc------ccCCChHHHHHHHHhhCChHH--HHHHHHHHHHHH
Q 019899 166 VHIIYGLSKDLSLPGFRTGVIYSY--NESVLAAAKKLTR------FCSISAPTQRLLISMLSDTKF--IQEYLETNKRRI 235 (334)
Q Consensus 166 ~~~~~s~sK~~~~~g~r~g~i~~~--~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~ 235 (334)
+++++|+||.+|++|+|+||+++. ++++++.+..... +...+...+.++..++...++ ..++..++++++
T Consensus 253 ~i~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 332 (413)
T 3t18_A 253 VVVAFSMSKSHTAYGLRSGAAVGISSSKEIIEEFEASLAHSARCNWSNGTHAAQNILIELERAENKKIYEQELVDLRNML 332 (413)
T ss_dssp EEEEEEHHHHTTCGGGCCEEEEEEESCHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCccCCCcCcCcEEEEEecCCHHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHH
Confidence 488899999999999999999874 7888888876432 235788999999988876542 234556788899
Q ss_pred HHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCC
Q 019899 236 KKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLT 315 (334)
Q Consensus 236 ~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~ 315 (334)
+++++++.+.|++.|+++..+.+++++|+++. +..++... +.++||.+.|| ++++|++++..+
T Consensus 333 ~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~---------~~~~~~~~-l~~~gv~v~~g-------~~~iRis~~~~~ 395 (413)
T 3t18_A 333 KSRADVFVTAAKENKLTMIPYFGGFFTFIPTD---------KAFDIVKD-LEKENIFTIPS-------AKGIRVAICGVG 395 (413)
T ss_dssp HHHHHHHHHHHHHTTCCCBCCCSSSCEEEECS---------CHHHHHHH-HHHTTEECEEC-------SSEEEECTTTSC
T ss_pred HHHHHHHHHHHHHcCCCccCCCceEEEEeCCC---------CHHHHHHH-HHhCCEEEecC-------CCceEEEEeeCC
Confidence 99999999999999999999999999998763 23577776 56689999996 368999998656
Q ss_pred cccHHHHHHHHHHHHHHc
Q 019899 316 HEDIPLVIERIQKVAETC 333 (334)
Q Consensus 316 ~~~l~~~l~~l~~~~~~~ 333 (334)
++++ +++|.+++++.
T Consensus 396 ~~~~---l~~l~~~l~~~ 410 (413)
T 3t18_A 396 EEKI---PKLVQRLAFYT 410 (413)
T ss_dssp GGGH---HHHHHHHHHHH
T ss_pred HHHH---HHHHHHHHHHH
Confidence 7776 78887777653
No 55
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=100.00 E-value=4.9e-40 Score=293.32 Aligned_cols=295 Identities=19% Similarity=0.309 Sum_probs=236.8
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITAL 84 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l 84 (334)
+++.+++.+++++++|++|+|+++++..++.++ +||+|+++.|+|+++...++ ..|.+++.+|..+++++.+ ++++
T Consensus 64 l~~~la~~~~~~~~~v~~~~g~~~al~~~~~~~--~gd~vl~~~p~y~~~~~~~~-~~g~~~~~v~~~~~~~~~~-l~~~ 139 (364)
T 1lc5_A 64 LHQALARHHQVPASWILAGNGETESIFTVASGL--KPRRAMIVTPGFAEYGRALA-QSGCEIRRWSLREADGWQL-TDAI 139 (364)
T ss_dssp HHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHH--CCSEEEEEESCCTHHHHHHH-HTTCEEEEEECCGGGTTCC-CTTH
T ss_pred HHHHHHHHHCcCHHHEEECCCHHHHHHHHHHHc--CCCeEEEeCCCcHHHHHHHH-HcCCeEEEEeCCcccccch-hHHH
Confidence 344444445677889999999999999999998 67999999999999999988 8899999999854334333 4545
Q ss_pred HHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCC
Q 019899 85 DQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKD 164 (334)
Q Consensus 85 ~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (334)
.+.++ .+++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++..... ... ..+
T Consensus 140 ~~~~~------~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~---~~~----~~~ 206 (364)
T 1lc5_A 140 LEALT------PDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIP---ALK----DNP 206 (364)
T ss_dssp HHHCC------TTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGG---GCT----TCT
T ss_pred HHhcc------CCCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhh---Hhc----cCC
Confidence 54443 26888999999999999999999999999999999999999999988775322222 111 157
Q ss_pred cEEEEecccccCCCCCceEEEEe-ecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHH
Q 019899 165 RVHIIYGLSKDLSLPGFRTGVIY-SYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFV 243 (334)
Q Consensus 165 ~~~~~~s~sK~~~~~g~r~g~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (334)
+++++.|+||.+|++|+|+||++ + ++++.+.++.....++.|++.+.++..+++.. +++.+.+++++++++++.
T Consensus 207 ~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~l~ 281 (364)
T 1lc5_A 207 HIWVLRSLTKFYAIPGLRLGYLVNS-DDAAMARMRRQQMPWSVNALAALAGEVALQDS----AWQQATWHWLREEGARFY 281 (364)
T ss_dssp TEEEEEESTTTTTCTTTCCEEEECC-CHHHHHHHHHHSCTTCSCHHHHHHHHHGGGCH----HHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEECchhhcCCccceEEEEEC-CHHHHHHHHHhCCCCCCCHHHHHHHHHHHhCc----HHHHHHHHHHHHHHHHHH
Confidence 88999999999998999999999 7 89999999887777889999999999999873 356778888999999999
Q ss_pred HHHHhC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHH
Q 019899 244 AGLKQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLV 322 (334)
Q Consensus 244 ~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~ 322 (334)
+.|+++ ++++..+ .|.++|++++.. ..++...|+ ++||.+.||..|+...++++|++++ ++++++++
T Consensus 282 ~~L~~~~~~~~~~~-~g~~~~~~~~~~--------~~~l~~~l~-~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~~~l 349 (364)
T 1lc5_A 282 QALCQLPLLTVYPG-RANYLLLRCERE--------DIDLQRRLL-TQRILIRSCANYPGLDSRYYRVAIR--SAAQNERL 349 (364)
T ss_dssp HHHHTSTTEEECCC-SSSEEEEEESCT--------TCCHHHHHH-TTTEECEECTTSTTCCTTEEEEECC--CHHHHHHH
T ss_pred HHHhcCCCCEECCC-CCeEEEEECCCc--------HHHHHHHHH-HCCcEEeeCcccCCCCCCEEEEEeC--CHHHHHHH
Confidence 999987 7776654 456678888742 236777755 4799999999886545689999987 68889999
Q ss_pred HHHHHHHHHHc
Q 019899 323 IERIQKVAETC 333 (334)
Q Consensus 323 l~~l~~~~~~~ 333 (334)
++.|+++++++
T Consensus 350 ~~~l~~~~~~~ 360 (364)
T 1lc5_A 350 LAALRNVLTGI 360 (364)
T ss_dssp HHHHHHHC---
T ss_pred HHHHHHHhhcc
Confidence 99999887654
No 56
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=100.00 E-value=2.5e-40 Score=300.81 Aligned_cols=286 Identities=16% Similarity=0.218 Sum_probs=234.7
Q ss_pred CCC--cEEEecCcHHHHHHH--HHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHH
Q 019899 16 DPS--QIVLTAGATPAVEIL--CFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQA 91 (334)
Q Consensus 16 ~~~--~i~~~~g~~~~~~~~--~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~ 91 (334)
+++ +|++|+|+++++..+ +.+++++||+|++++|+|.++...++ ..|.+++.+|+.+++++.+|++.+++++++.
T Consensus 114 ~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 192 (420)
T 4f4e_A 114 AAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALFD-MAGFEVVAYPYYDAKTNGVNFDGMLAALNGY 192 (420)
T ss_dssp HTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHH-HTTCCEEEEECEETTTTEECHHHHHHHHTTC
T ss_pred ccCceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHH-HcCCeEEEeeeeccccCccCHHHHHHHHHhC
Confidence 577 899999999999999 45668999999999999999999998 8999999999854567889999999999731
Q ss_pred HHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCC-CcchhhhhhhccccCCCcEEEEe
Q 019899 92 RKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNE-EFVSMAEILEAEEVDKDRVHIIY 170 (334)
Q Consensus 92 ~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 170 (334)
..+++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+++.+++. ...++..+.. ..++++++.
T Consensus 193 ---~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~----~~~~~i~~~ 265 (420)
T 4f4e_A 193 ---EPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAA----ANLNVFVSS 265 (420)
T ss_dssp ---CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHH----TTCCEEEEE
T ss_pred ---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHh----cCCCEEEEE
Confidence 12678899999999999999999999999999999999999999999998642 3345554443 268899999
Q ss_pred cccccCCCCCceEEEEee--cCHHHHHHH----HHh--hcccCCChHHHHHHHHhhCChHH---HHHHHHHHHHHHHHHH
Q 019899 171 GLSKDLSLPGFRTGVIYS--YNESVLAAA----KKL--TRFCSISAPTQRLLISMLSDTKF---IQEYLETNKRRIKKLY 239 (334)
Q Consensus 171 s~sK~~~~~g~r~g~i~~--~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~ 239 (334)
|+||.+|++|+|+||+++ +++++++.+ +.. ....+.+...+.++..++..... .++++.++++++++++
T Consensus 266 S~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~ 345 (420)
T 4f4e_A 266 SFSKSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMR 345 (420)
T ss_dssp ECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eCCccCcCcCCCcEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999863 466665543 222 12345678888888888877532 2456788999999999
Q ss_pred HHHHHHHHhC----CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCC
Q 019899 240 DSFVAGLKQL----GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLT 315 (334)
Q Consensus 240 ~~~~~~l~~~----g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~ 315 (334)
+.+.+.|++. ++.+..+.+|+++|++++. +.+..+++++||.+.|+. |++++..+
T Consensus 346 ~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~-----------~~~~~~l~~~gI~v~~~~----------Ris~~~~~ 404 (420)
T 4f4e_A 346 NGLVERLKAAGIERDFSFINAQRGMFSYSGLTS-----------AQVDRLREEFGIYAVSTG----------RICVAALN 404 (420)
T ss_dssp HHHHHHHHHTTCSSCCTHHHHSCSSEEECCCCH-----------HHHHHHHHHHCEECCTTS----------EEEGGGCC
T ss_pred HHHHHHHHhcCCCCCceeECCCccEEEEeCCCH-----------HHHHHHHHhCCEEecCCC----------eEEEecCC
Confidence 9999999987 6788888899999987742 445666777999998842 99998668
Q ss_pred cccHHHHHHHHHHHH
Q 019899 316 HEDIPLVIERIQKVA 330 (334)
Q Consensus 316 ~~~l~~~l~~l~~~~ 330 (334)
++++++++++|++++
T Consensus 405 ~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 405 TRNLDVVANAIAAVL 419 (420)
T ss_dssp TTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 899999999999886
No 57
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=100.00 E-value=9.8e-41 Score=311.14 Aligned_cols=299 Identities=18% Similarity=0.325 Sum_probs=240.5
Q ss_pred CCcEEEecCcHHHHHHHHHH-----hcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCC--CCCccccHHHHHHHHH
Q 019899 17 PSQIVLTAGATPAVEILCFC-----LADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRS--TDNFAFSITALDQAFN 89 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~-----l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~--~~~~~~~~~~l~~~l~ 89 (334)
+++|++|+|+++++..++.+ ++++||+|+++.|+|.++...+. ..|.+++.++++. ++++.+|+++|+++++
T Consensus 164 ~~~i~~t~G~t~al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~-~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~ 242 (533)
T 3f6t_A 164 QTDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPE-LKDYELVEVDLHSYEKNDWEIEPNEIEKLKD 242 (533)
T ss_dssp GEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEESSCCHHHHTSGG-GGGSEEEEECCCEETTTTSEECHHHHHHHSC
T ss_pred cceEEEECCHHHHHHHHHHHhhhhhccCCcCEEEEcCCCcHHHHHHHH-HcCCeEEEEEecCCcccCCCCCHHHHHHHhC
Confidence 46999999999999999998 78999999999999999999998 8899999999864 5668899999999886
Q ss_pred HHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHH-hcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEE
Q 019899 90 QARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAR-EKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHI 168 (334)
Q Consensus 90 ~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~-~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (334)
+ ++++|++++|+||||.++|.+++++|+++|+ +||+++|+||+|+.+.++. .++.... .+++++
T Consensus 243 ~------~~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~---~~~~~~~------~~~~i~ 307 (533)
T 3f6t_A 243 P------SIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNF---KSIYSVV------PYNTML 307 (533)
T ss_dssp T------TEEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTC---CCHHHHS------GGGEEE
T ss_pred C------CCeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCc---cCHhhcC------CCCEEE
Confidence 5 8999999999999999999999999999999 6899999999999887642 3333332 478899
Q ss_pred EecccccCCCCCceEEEEeecCHHHHHHHH------------------------------------Hh--hcccCCChHH
Q 019899 169 IYGLSKDLSLPGFRTGVIYSYNESVLAAAK------------------------------------KL--TRFCSISAPT 210 (334)
Q Consensus 169 ~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~------------------------------------~~--~~~~~~~~~~ 210 (334)
+.||||.+|++|+|+||++++++.+.+.+. .. ....+.+++.
T Consensus 308 ~~S~SK~~g~~G~RiG~l~~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~ 387 (533)
T 3f6t_A 308 VYSYSKLFGCTGWRLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQ 387 (533)
T ss_dssp EEESHHHHTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHH
T ss_pred EecCcccCCCcccceEEEEECcHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHH
Confidence 999999999999999999996553333321 11 1224567778
Q ss_pred HHHH----HHhhCC--h-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCC-C--------
Q 019899 211 QRLL----ISMLSD--T-KFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSY-S-------- 274 (334)
Q Consensus 211 ~~~~----~~~l~~--~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~-~-------- 274 (334)
|.++ ...+.. + +...+++.+++++++++++.+.+.|. .++.+..+.+++|+|++++...... .
T Consensus 388 q~a~a~~a~~~L~~~~g~~~~~~~~~~~~~~~~~r~~~l~~~L~-~~~~~~~~~~g~~~~~~l~~~~~~~~g~~~~~~~~ 466 (533)
T 3f6t_A 388 QIMEALFSMTHLLTSTNGGSDDPYIDIARKLVSERYDQLHDAMQ-APKDETDTNTHYYSLIDIYRLAEKIYGKEFRDYLT 466 (533)
T ss_dssp HHHHHHHHHHHHTTCBGGGTBCHHHHHHHHHHHHHHHHHHHHHT-CCCCCSTTBCCSEEEEEHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHhcC-CCccccCCCceEEEEEehHhhhhhccchHHHHHhh
Confidence 8773 344431 0 11145678888999999999999998 7888888999999999987421000 0
Q ss_pred -hhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHHHHHHHHHHHc
Q 019899 275 -EKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 275 -~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
..++.+++..+++++||.+.||+.|+. .++++|++++..+++++++++++|+++++++
T Consensus 467 ~~~~~~~~~~~ll~~~GV~v~pg~~f~~-~~~~iRls~a~~~~e~i~~~i~~L~~~l~~~ 525 (533)
T 3f6t_A 467 NNFEQVDFLLKLAEKNGVVLVDGVGFGA-KPGELRVSQANLPTEDYALIGKQVLELLKEY 525 (533)
T ss_dssp HHCCHHHHHHHHHHHTTSSSCTTEEECS-STTEEEEESSSSCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHhCCEEEeCCcccCC-CCCEEEEEEeeCCHHHHHHHHHHHHHHHHHH
Confidence 013457888888889999999999986 4679999998779999999999999998764
No 58
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=100.00 E-value=3.1e-40 Score=298.40 Aligned_cols=298 Identities=17% Similarity=0.235 Sum_probs=235.9
Q ss_pred hhhhhhhhcCCCCCCCCcEEE--ecCcHHHHHHHHHHhc---CCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCC
Q 019899 2 AGFMSQVLGQAVSFDPSQIVL--TAGATPAVEILCFCLA---DHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDN 76 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~--~~g~~~~~~~~~~~l~---~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~ 76 (334)
++|+.+..+ +.+++++|++ |+|+++++..++..+. ++||+|++++|+|.++...++ ..|.+++.+|+.++++
T Consensus 81 a~~~~~~~~--~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~ 157 (401)
T 7aat_A 81 AELALGENS--EAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFR-DAGLQLQAYRYYDPKT 157 (401)
T ss_dssp HHHHHCTTC--HHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHH-HTTCEEEEEECEETTT
T ss_pred HHHhcCCCc--cccccCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHH-HcCCeeEeeeeecccc
Confidence 344443333 3356889987 9999999998887664 899999999999999999998 8999999999865557
Q ss_pred ccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCC--Ccchhhh
Q 019899 77 FAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNE--EFVSMAE 154 (334)
Q Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~--~~~~~~~ 154 (334)
+.+|++.+++.+++. ..+++++++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++. ...++..
T Consensus 158 ~~~d~~~l~~~l~~~---~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~ 234 (401)
T 7aat_A 158 CSLDFTGAMEDISKI---PEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRH 234 (401)
T ss_dssp TEECHHHHHHHHTTS---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHH
T ss_pred CccCHHHHHHHHHhC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHH
Confidence 899999998888641 23688999999999999999999999999999999999999999999887543 1223333
Q ss_pred hhhccccCCCcEEEEecccccCCCCCceEEEEee--cCHH----HHHHHHHhhc--ccCCChHHHHHHHHhhCChHHH--
Q 019899 155 ILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYS--YNES----VLAAAKKLTR--FCSISAPTQRLLISMLSDTKFI-- 224 (334)
Q Consensus 155 ~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~--~~~~----~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~-- 224 (334)
+.. ..++++++.|+||.+|++|+|+||+++ .+++ +.+.++.... ..+.+...+.+++.++.+.++.
T Consensus 235 ~~~----~~~~~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 310 (401)
T 7aat_A 235 FIE----QGIDVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKE 310 (401)
T ss_dssp HHH----TTCCCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHH
T ss_pred HHh----cCCcEEEEecCCcccccccCceEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHH
Confidence 322 167889999999999999999999886 3555 4444444332 2355667777777777765331
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHhCC----CcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCc
Q 019899 225 -QEYLETNKRRIKKLYDSFVAGLKQLG----IRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSAC 299 (334)
Q Consensus 225 -~~~~~~~~~~~~~~~~~~~~~l~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~ 299 (334)
.+++.+.+++++++++++.+.|++++ +++..+.+++++|++++ .+....+++++||.+.|+
T Consensus 311 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ll~~~gi~v~~~--- 376 (401)
T 7aat_A 311 WLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLK-----------PEQVERLTKEFSIYMTKD--- 376 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHCCSSEEECCCC-----------HHHHHHHHHHHCEECCTT---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCceecCCcceEEecCCC-----------HHHHHHHHHhCCEeccCC---
Confidence 45567888999999999999999875 66677889999998664 255677788899999764
Q ss_pred CCCCCCeEEEEecCCCcccHHHHHHHHHHHH
Q 019899 300 HCIEPGWFRCCFTSLTHEDIPLVIERIQKVA 330 (334)
Q Consensus 300 ~~~~~~~iRi~~~~~~~~~l~~~l~~l~~~~ 330 (334)
+|++++..++++++++++.|++++
T Consensus 377 -------~Ris~~~~~~~~i~~~~~~l~~~~ 400 (401)
T 7aat_A 377 -------GRISVAGVASSNVGYLAHAIHQVT 400 (401)
T ss_dssp -------CEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred -------CeEEeccCChhhHHHHHHHHHHHh
Confidence 599998778888999999999876
No 59
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=100.00 E-value=1.6e-40 Score=303.21 Aligned_cols=291 Identities=18% Similarity=0.275 Sum_probs=237.8
Q ss_pred CCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccC------------cEEEEEeCCCCCCcccc
Q 019899 13 VSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTG------------VELIPVHCRSTDNFAFS 80 (334)
Q Consensus 13 ~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g------------~~v~~v~~~~~~~~~~~ 80 (334)
+++++++|++|+|+++++..+ ..++++||+|++++|+|+++...++ ..| .+++.+++++++++..+
T Consensus 115 ~~~~~~~i~~t~G~~~al~~l-~~l~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (432)
T 3ei9_A 115 LGIGDDDVFVSDGAKCDISRL-QVMFGSNVTIAVQDPSYPAYVDSSV-IMGQTGQFNTDVQKYGNIEYMRCTPENGFFPD 192 (432)
T ss_dssp TTCCGGGEEEESCHHHHHHHH-HHHHCTTCCEEEEESCCTHHHHHHH-HHTCSCCEETTTTEETTCEEEECCGGGTTSCC
T ss_pred CCCCcceEEECCChHHHHHHH-HHHcCCCCEEEEeCCCCHHHHHHHH-HcCCcccccccccccCceEEeccCcccCCcCC
Confidence 577889999999999999975 7778899999999999999998887 666 36788887654455555
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++. ..+++++++++|+||||.+++.+++++|+++|++||++||+||+|+++.+++. ..++..+...
T Consensus 193 l~~-----------~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~-~~~~~~~~~~-- 258 (432)
T 3ei9_A 193 LST-----------VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDN-PRSIFEIPGA-- 258 (432)
T ss_dssp GGG-----------CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSC-CSSGGGSTTG--
T ss_pred hhh-----------CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCC-CCChhhcCCC--
Confidence 443 13789999999999999999999999999999999999999999999887643 2344433221
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHH--------HHHHHHhh--cccCCChHHHHHHHHhhCChHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESV--------LAAAKKLT--RFCSISAPTQRLLISMLSDTKFIQEYLET 230 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~--------~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 230 (334)
.++++++.|+||.+|++|+|+||+++ ++++ ++.+.... ..++.+++.+.++..++.... .+++.+
T Consensus 259 --~~~~i~~~S~SK~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~ 333 (432)
T 3ei9_A 259 --EEVAMETASFSNYAGFTGVRLGWTVI-PKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEG--LEAMHK 333 (432)
T ss_dssp --GGTEEEEEESHHHHCTTTTCCEEEEC-CTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHH--HHHHHH
T ss_pred --CCeEEEEecchhccCCcccceEEEEE-ChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhccc--HHHHHH
Confidence 46789999999999999999999998 4444 66665543 234678899998888886432 356788
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEE
Q 019899 231 NKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCC 310 (334)
Q Consensus 231 ~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~ 310 (334)
++++++++++++.+.|++.|+++..+.+++++|++++.. +..++...+++++||.+.||..|++..++++|++
T Consensus 334 ~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis 406 (432)
T 3ei9_A 334 VIGFYKENTNIIIDTFTSLGYDVYGGKNAPYVWVHFPNQ-------SSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVS 406 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCEEECSSSSEEEEECTTS-------CHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHCCceecCCCcceEEEEECCCC-------CHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEE
Confidence 899999999999999999999888877889999999832 3467888888888999999999987678999999
Q ss_pred ecCCCcccHHHHHHHHHHHHHH
Q 019899 311 FTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 311 ~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
+. .+++++++++++|++--+.
T Consensus 407 ~~-~~~e~l~~~l~rl~~~~~~ 427 (432)
T 3ei9_A 407 AF-GHRENILEACRRFKQLYKH 427 (432)
T ss_dssp CC-SCHHHHHHHHHHHHHHHTT
T ss_pred ec-CCHHHHHHHHHHHHHHhhh
Confidence 87 6899999999999876443
No 60
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=100.00 E-value=3.6e-40 Score=307.43 Aligned_cols=298 Identities=16% Similarity=0.300 Sum_probs=233.2
Q ss_pred CCCcEEEecCcHHHHHHHHHH-----hcCCCCeEEecCCCCCChhhhhhh-ccCcEEEEEeCCCCCCccccHHHHHHHHH
Q 019899 16 DPSQIVLTAGATPAVEILCFC-----LADHGNALLVPSPYYPGFDRDIRF-RTGVELIPVHCRSTDNFAFSITALDQAFN 89 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~-----l~~~gd~vl~~~p~~~~~~~~~~~-~~g~~v~~v~~~~~~~~~~~~~~l~~~l~ 89 (334)
++++|++|+|+++++..++.+ ++++||+|++++|+|+.+...+.. ..|.+++.+++++++++.+|+++++++++
T Consensus 164 ~~~~I~~t~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~ 243 (546)
T 2zy4_A 164 ESVNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKD 243 (546)
T ss_dssp GGEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGS
T ss_pred CcceEEEECCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhC
Confidence 468999999999999999988 578999999999999999987541 34789999998766778899999988765
Q ss_pred HHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHH--HhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEE
Q 019899 90 QARKRGVKVRGILICNPANPVGNIIPRETLYELLDFA--REKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVH 167 (334)
Q Consensus 90 ~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~--~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (334)
. +++++++++|+||||.+++.+++++|+++| +++|++||+||+|+++.++ +.++.... .++++
T Consensus 244 ~------~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~---~~s~~~~~------~~~~i 308 (546)
T 2zy4_A 244 P------AIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADD---FQSLFAIC------PENTL 308 (546)
T ss_dssp T------TEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTT---CCCHHHHC------GGGEE
T ss_pred C------CCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhccc---CcCHHHhC------CCCEE
Confidence 3 799999999999999999999999999999 8899999999999998753 23444332 46899
Q ss_pred EEecccccCCCCCceEEEEeecCHHHHHHHHHh--------------------------------------hcccCCChH
Q 019899 168 IIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL--------------------------------------TRFCSISAP 209 (334)
Q Consensus 168 ~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~ 209 (334)
++.||||.+|++|+|+||++++++++++.+... ....+.+++
T Consensus 309 ~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~ 388 (546)
T 2zy4_A 309 LVYSFSKYFGATGWRLGVVAAHQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTP 388 (546)
T ss_dssp EEEESTTTTTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHH
T ss_pred EEEeCccccCCCCcceEEEEECCHHHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcH
Confidence 999999999999999999998554466665311 111356777
Q ss_pred HHHHH-----HHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcC---CCC-------C
Q 019899 210 TQRLL-----ISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLI---PSY-------S 274 (334)
Q Consensus 210 ~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~---~~~-------~ 274 (334)
.|.++ ..++... +.+..++++.++++++.+.+.|. .++....+.+++|+|++++... ... .
T Consensus 389 ~Q~a~a~~a~~all~~~---~~~~~~~r~~~~~r~~~l~~~L~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~ 464 (546)
T 2zy4_A 389 QQVQMALFSLFALMDEA---DEYKHTLKQLIRRRETTLYRELG-MPPLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVK 464 (546)
T ss_dssp HHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHHHHHHGGGT-SSCCCCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHhcC-CCcccCCCCeeEEEEEEHHHhhcccccHHHHHHhhc
Confidence 77764 3455442 34556778889999999999886 5666667889999999986310 000 0
Q ss_pred hhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHHHHHHHHHHHc
Q 019899 275 EKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 275 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
..++.+.+.++++++||.+.||..|+. .++++|++++..+++++++++++|+++++++
T Consensus 465 ~~~~~~~l~~ll~~~gV~v~pG~~F~~-~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~ 522 (546)
T 2zy4_A 465 QSSTGDMLFRIADETGIVLLPGRGFGS-NRPSGRASLANLNEYEYAAIGRALRKMADEL 522 (546)
T ss_dssp HCCHHHHHHHHHHHHSCCCEESSCTTC-SSCEEEEESSSSCHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHCCEEEeCccccCC-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Confidence 001235556668889999999999986 4679999999558899999999999988753
No 61
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=100.00 E-value=5e-39 Score=286.35 Aligned_cols=293 Identities=20% Similarity=0.325 Sum_probs=242.7
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITAL 84 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l 84 (334)
+++.+++.+++++++|++|+|+++++..++.++ |+|+++.|+|.++...++ ..|.+++.++++++ ..++++++
T Consensus 66 l~~~la~~~~~~~~~i~~~~g~t~al~~~~~~~----d~vi~~~~~~~~~~~~~~-~~g~~~~~~~~~~~--~~~~~~~l 138 (361)
T 3ftb_A 66 LNKSIENYLKLKDIGIVLGNGASEIIELSISLF----EKILIIVPSYAEYEINAK-KHGVSVVFSYLDEN--MCIDYEDI 138 (361)
T ss_dssp HHHHHHHHHTCCSCEEEEESSHHHHHHHHHTTC----SEEEEEESCCTHHHHHHH-HTTCEEEEEECCTT--SCCCHHHH
T ss_pred HHHHHHHHhCCCcceEEEcCCHHHHHHHHHHHc----CcEEEecCChHHHHHHHH-HcCCeEEEeecCcc--cCCCHHHH
Confidence 334444445678899999999999999999988 899999999999999998 89999999998533 35677888
Q ss_pred HHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCC
Q 019899 85 DQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKD 164 (334)
Q Consensus 85 ~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (334)
++++++ ++++++++|+||||.++|.+++++|+++|++||+++|+||+|+++.++ .. .+...... ..+
T Consensus 139 ~~~l~~-------~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~-~~~~~~~~----~~~ 205 (361)
T 3ftb_A 139 ISKIDD-------VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGD-PS-SSFVGEIK----NYS 205 (361)
T ss_dssp HHHTTT-------CSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCC-TT-SSSGGGTT----TCS
T ss_pred HHhccC-------CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCC-cc-cchhHhcc----cCC
Confidence 888752 789999999999999999999999999999999999999999998875 22 22222222 167
Q ss_pred cEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHH
Q 019899 165 RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVA 244 (334)
Q Consensus 165 ~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (334)
+++++.|+||.+|++|+|+||+++.++++.+.++.....++.+++.+.++..+++.. +++.+.+++++++++++.+
T Consensus 206 ~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~l~~ 281 (361)
T 3ftb_A 206 CLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNPWNINCFAEMAAINCLKDT----NYIEESLLWIKKERKRFIE 281 (361)
T ss_dssp SEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHHTTSCTTCSCHHHHHHHHHTSSCH----HHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEeeChhhcCCCCcceeEEEeCCHHHHHHHHhhCCCCCCCHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999994489999999988888899999999999999863 4567788889999999999
Q ss_pred HHHhC-CCc-ccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHH
Q 019899 245 GLKQL-GIR-CSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLV 322 (334)
Q Consensus 245 ~l~~~-g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~ 322 (334)
.|+++ ++. +..+. +.++|++++.. +..++...|.+ +||.+.||..|+...++++|++++ ++++++++
T Consensus 282 ~l~~~~~~~~~~~~~-~~~~~~~~~~~-------~~~~l~~~l~~-~gi~v~~g~~~~~~~~~~iRis~~--~~~~~~~l 350 (361)
T 3ftb_A 282 ELNKIGFIKRVFSPH-ANFVLCRLENI-------SGEKLYDSLLK-EDIVIRRCCNFIGLDDSFVRFAIK--DEKKNTKF 350 (361)
T ss_dssp HHHHSSSEEEEECCS-SSEEEEEESSS-------CHHHHHHHHHT-TTEECEECTTSTTCCTTEEEEECC--CHHHHHHH
T ss_pred HHHhCCCCceecCCC-CeEEEEEcCCC-------CHHHHHHHHHH-CCeEEeeCccCCCCCCCEEEEEcC--CHHHHHHH
Confidence 99988 677 55555 45677888761 34678888665 699999999987666789999998 78888888
Q ss_pred HHHHHHHHHH
Q 019899 323 IERIQKVAET 332 (334)
Q Consensus 323 l~~l~~~~~~ 332 (334)
++.|+++.+.
T Consensus 351 ~~~l~~~~~~ 360 (361)
T 3ftb_A 351 LRALKGVENN 360 (361)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 8888887754
No 62
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=100.00 E-value=1.5e-39 Score=295.88 Aligned_cols=309 Identities=16% Similarity=0.197 Sum_probs=244.3
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHH--HHHHHhcC--C---------CCeEEecCCCCCChhhhhhhccCcEEEEEeC
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVE--ILCFCLAD--H---------GNALLVPSPYYPGFDRDIRFRTGVELIPVHC 71 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~--~~~~~l~~--~---------gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~ 71 (334)
+++.+++.+++++++|++|+|+++++. .++.++++ + ||+|++++|+|.++...++ ..|.+++.+|+
T Consensus 75 lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~-~~g~~~~~v~~ 153 (423)
T 3ez1_A 75 ARALFAGYLDVKAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQ-TLGFELLTVDM 153 (423)
T ss_dssp HHHHHHHHTTSCGGGEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHH-HHTCEEEEEEE
T ss_pred HHHHHHHHhCCChhhEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHH-HcCCEEEeccC
Confidence 455566666788999999999999998 88888877 7 5999999999999999998 89999999998
Q ss_pred CCCCCccccHHHHHHHHHHHHHcCCceeEEEEe-CCCCCcccCCCHHHHHHHHHHH-HhcCcEEEEeccccccccCC---
Q 019899 72 RSTDNFAFSITALDQAFNQARKRGVKVRGILIC-NPANPVGNIIPRETLYELLDFA-REKNIHVISDEIYGGSIFGN--- 146 (334)
Q Consensus 72 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~-~p~nptG~~~~~~~l~~i~~~~-~~~~~~vi~D~~~~~~~~~~--- 146 (334)
++ ..+|+++|++++++ ..++++|+++ +|+||||.+++.+++++|+++| +++|++||+||+|+.+.+.+
T Consensus 154 ~~---~g~d~~~l~~~l~~----~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~ 226 (423)
T 3ez1_A 154 QS---DGPDVDAVERLAGT----DPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDR 226 (423)
T ss_dssp ET---TEECHHHHHHHHHS----CTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSC
T ss_pred CC---CCCCHHHHHHHHhh----CCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCC
Confidence 43 25999999999962 1378988755 7899999999999999999999 99999999999999765543
Q ss_pred CCcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCC-hHH
Q 019899 147 EEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSD-TKF 223 (334)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~-~~~ 223 (334)
....++..+....+ ..++++++.|+||. +++|+|+||+++ ++++++.+..... .++.+++.|.++..++.. .+.
T Consensus 227 ~~~~~~~~~~~~~~-~~~~~i~~~S~sK~-~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~ 303 (423)
T 3ez1_A 227 AEPVNFVVLARDAG-YPDRAFVFASTSKI-TFAGAGLGFVAS-SEDNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGG 303 (423)
T ss_dssp CCCCCHHHHHHHHT-CTTSEEEEEESTTT-SCSSSSCEEEEE-CHHHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTH
T ss_pred CCCcchhhhhhccC-CCCeEEEEeCchhh-ccCCcceEEEEe-CHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhccch
Confidence 23345554421001 16889999999998 469999999998 8888888876543 357788999998888876 223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh----CC--CcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcC-C
Q 019899 224 IQEYLETNKRRIKKLYDSFVAGLKQ----LG--IRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTP-G 296 (334)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~l~~----~g--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~-g 296 (334)
+.+++.+.++.++++++.+.+.|.+ .+ +++..+.+|+++|++++.. +..++... ++++||.+.| |
T Consensus 304 ~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~-------~~~~~~~~-l~~~gv~v~~~g 375 (423)
T 3ez1_A 304 LEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGGYFISLDTAEP-------VADRVVKL-AEAAGVSLTPAG 375 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCSBSSCEEEEESSS-------CHHHHHHH-HHHTTEECCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCCccEEEEEECCCC-------cHHHHHHH-HHHCCcEEecCc
Confidence 3566677777777777777666654 44 6777888999999999863 23455555 6678999999 7
Q ss_pred CCcCC---CCCCeEEEEecCCCcccHHHHHHHHHHHHHH
Q 019899 297 SACHC---IEPGWFRCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 297 ~~~~~---~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
..|+. ..++++||+++..+++++++++++|++++++
T Consensus 376 ~~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~ 414 (423)
T 3ez1_A 376 ATYPAGQDPHNRNLRLAPTRPPVEEVRTAMQVVAACIRL 414 (423)
T ss_dssp TTSSTTCCSSSCEEEECCSSSCHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 77753 2468999999855999999999999999875
No 63
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=100.00 E-value=8.1e-40 Score=295.20 Aligned_cols=285 Identities=15% Similarity=0.174 Sum_probs=233.5
Q ss_pred CCC--cEEEecCcHHHHHHHH--HHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHH
Q 019899 16 DPS--QIVLTAGATPAVEILC--FCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQA 91 (334)
Q Consensus 16 ~~~--~i~~~~g~~~~~~~~~--~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~ 91 (334)
+++ +|++|+|+++++..++ .+++++||+|++++|+|.++...++ ..|.+++.+++.+++++.+|++++++++++.
T Consensus 92 ~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 170 (397)
T 3fsl_A 92 KQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFA-GAGFEVSTYPWYDEATNGVRFNDLLATLKTL 170 (397)
T ss_dssp HTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHH-HTTCCEEEECCEETTTTEECHHHHHHHHTTC
T ss_pred cccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHH-HcCCceEEEeeeeccCCcCcHHHHHHHHHhC
Confidence 678 8999999999999994 4567899999999999999999998 8999999999854567889999999999731
Q ss_pred HHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCC-CCcchhhhhhhccccCCCcEEEEe
Q 019899 92 RKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGN-EEFVSMAEILEAEEVDKDRVHIIY 170 (334)
Q Consensus 92 ~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 170 (334)
..+++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+++.+++ ....++..+.. ..++++++.
T Consensus 171 ---~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~ 243 (397)
T 3fsl_A 171 ---QAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIAS----AGLPALVSN 243 (397)
T ss_dssp ---CTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHH----TTCCEEEEE
T ss_pred ---CCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHh----cCCCEEEEe
Confidence 1267889999999999999999999999999999999999999999998863 23345544433 268899999
Q ss_pred cccccCCCCCceEEEEee--cCHHHHHHHHH-h-----hcccCCChHHHHHHHHhhCChHH---HHHHHHHHHHHHHHHH
Q 019899 171 GLSKDLSLPGFRTGVIYS--YNESVLAAAKK-L-----TRFCSISAPTQRLLISMLSDTKF---IQEYLETNKRRIKKLY 239 (334)
Q Consensus 171 s~sK~~~~~g~r~g~i~~--~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~ 239 (334)
|+||.+|++|+|+||+++ .++++++.+.. . ....+.+...+.++..++....+ ..+++.++++++++++
T Consensus 244 S~SK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~ 323 (397)
T 3fsl_A 244 SFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMR 323 (397)
T ss_dssp ECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccCcCCCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999974 46666554432 1 12335578889988888887532 1456788899999999
Q ss_pred HHHHHHHHhC----CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCC
Q 019899 240 DSFVAGLKQL----GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLT 315 (334)
Q Consensus 240 ~~~~~~l~~~----g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~ 315 (334)
+++.+.|++. ++.+..+.+|+++|++++. +....+++++||.+.||. |++++..+
T Consensus 324 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~gi~v~~g~----------Ris~~~~~ 382 (397)
T 3fsl_A 324 QELVKVLSTEMPERNFDYLLNQRGMFSYTGLSA-----------AQVDRLREEFGVYLIASG----------RMCVAGLN 382 (397)
T ss_dssp HHHHHHHHHHCTTSCCTHHHHCCSSEEECCCCH-----------HHHHHHHHTTCEECCTTC----------EEEGGGCC
T ss_pred HHHHHHHHhcCCCCCceeecCCceEEEecCCCH-----------HHHHHHHHhCCEEECCCC----------eEEEEecC
Confidence 9999999987 6888888899999987742 445566788999999864 99998668
Q ss_pred cccHHHHHHHHHHH
Q 019899 316 HEDIPLVIERIQKV 329 (334)
Q Consensus 316 ~~~l~~~l~~l~~~ 329 (334)
++++++++++|+++
T Consensus 383 ~~~i~~~~~~l~~~ 396 (397)
T 3fsl_A 383 TANVQRVAKAFAAV 396 (397)
T ss_dssp TTTHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHhh
Confidence 89999999999876
No 64
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=100.00 E-value=1.8e-43 Score=318.66 Aligned_cols=311 Identities=21% Similarity=0.276 Sum_probs=253.8
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCC-CCcccc
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRST-DNFAFS 80 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~-~~~~~~ 80 (334)
++|+.+..+ +.+++++|++|+|+++++..++.++.++||+|+++.|+|+++...++ ..|.+++.++..++ +++.+|
T Consensus 76 a~~l~~~~g--~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~g~~~~d 152 (392)
T 3b1d_A 76 LDWEKSEHQ--YSFDKEDIVFVEGVVPAISIAIQAFTKEGEAVLINSPVYPPFARSVR-LNNRKLVSNSLKEENGLFQID 152 (392)
Confidence 344444333 44778899999999999999999999999999999999999999888 88999999987433 246799
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++. +++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+.+.+++..+.++..+.. +
T Consensus 153 ~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~--~ 225 (392)
T 3b1d_A 153 FEQLENDIVEN-----DVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSP--D 225 (392)
Confidence 99999999742 6889999999999999999999999999999999999999999999887655555554432 0
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhccc---CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFC---SISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
+ .++++++.|+||.+|++|+|+||++++++++++.++.....+ +.+++.+.++..++... ++++.+.++++++
T Consensus 226 ~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~ 301 (392)
T 3b1d_A 226 F-KDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQLVNNHHEVSSLGYIATETAYRYG---KPWLVALKAVLEE 301 (392)
Confidence 0 467899999999999999999999985566888887665544 45778888887777642 3556778888999
Q ss_pred HHHHHHHHHHh-C-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCC
Q 019899 238 LYDSFVAGLKQ-L-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLT 315 (334)
Q Consensus 238 ~~~~~~~~l~~-~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~ 315 (334)
+++.+.+.|++ + ++++..+.+++++|++++... .+..++...|++++||.+.||..|+...++++|++++ .+
T Consensus 302 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~-~~ 375 (392)
T 3b1d_A 302 NIQFAVEYFAQEAPRLKVMKPQGTYLIWLDFSDYG-----LTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIA-AP 375 (392)
Confidence 99999999987 4 788888899999999987521 1235788886667899999999887555689999998 57
Q ss_pred cccHHHHHHHHHHHHHH
Q 019899 316 HEDIPLVIERIQKVAET 332 (334)
Q Consensus 316 ~~~l~~~l~~l~~~~~~ 332 (334)
++++++++++|++++++
T Consensus 376 ~e~i~~~l~~l~~~l~~ 392 (392)
T 3b1d_A 376 KSLVEEICKRIVCCLPK 392 (392)
Confidence 89999999999988753
No 65
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=100.00 E-value=2.3e-40 Score=299.10 Aligned_cols=289 Identities=22% Similarity=0.293 Sum_probs=227.3
Q ss_pred CCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcE-EEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 15 FDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVE-LIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 15 ~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~-v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
+++++|++|+|+++++..++. ++++||+|++++|+|+++...++ ..|.+ ++.+|+++++++..+++++
T Consensus 93 ~~~~~v~~~~G~~~al~~~~~-~~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~l~~~--------- 161 (400)
T 3asa_A 93 VDAKEIFISDGAKVDLFRLLS-FFGPNQTVAIQDPSYPAYLDIAR-LTGAKEIIALPCLQENAFFPEFPED--------- 161 (400)
T ss_dssp SCGGGEEEESCHHHHHHHHHH-HHCSSCEEEEEESCCHHHHHHHH-HTTCSEEEEEECCGGGTTCCCCCTT---------
T ss_pred CCHHHEEEccChHHHHHHHHH-HcCCCCEEEECCCCcHHHHHHHH-HcCCcceEecccchhcCcccChhhc---------
Confidence 678899999999999998764 45789999999999999999888 88988 9999985444444444321
Q ss_pred cCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEeccc
Q 019899 94 RGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLS 173 (334)
Q Consensus 94 ~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s 173 (334)
.++++|++++|+||||.++|.+++++|+++|+++|+++|+||+|+++.+++....++..+.. ..++++++.|+|
T Consensus 162 --~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~s~s 235 (400)
T 3asa_A 162 --THIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPD----ARFCAIEINSFS 235 (400)
T ss_dssp --CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTT----GGGTEEEEEECC
T ss_pred --cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCC----CCCceEEEecch
Confidence 27899999999999999999999999999999999999999999988776543344444321 035789999999
Q ss_pred ccCCCCCceEEEEeecCHHH-------HHHHHH--hhcc-cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHH
Q 019899 174 KDLSLPGFRTGVIYSYNESV-------LAAAKK--LTRF-CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFV 243 (334)
Q Consensus 174 K~~~~~g~r~g~i~~~~~~~-------~~~~~~--~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (334)
|.+|++|+|+||+++ ++++ .+.+.. .... ++.+++.+.++..+++.. ++.+.+++++++++++.
T Consensus 236 K~~g~~GlriG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-----~~~~~~~~~~~~~~~l~ 309 (400)
T 3asa_A 236 KPLGFAGIRLGWTVI-PQELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSIL-----PQLEAIHYYRENSDLLR 309 (400)
T ss_dssp GGGTTTTCCCEEEEC-CTTCBCTTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHT-----TTCHHHHHHHHHHHHHH
T ss_pred hhcCCcchheeEEee-ChhhccchhhhHHHHHHHHhccCccCCChHHHHHHHHHhCcH-----HHHHHHHHHHHHHHHHH
Confidence 999999999999998 5555 444432 2223 368899998888887543 34567788889999999
Q ss_pred HHHHhCCCcccCCCceeEEeee-cCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHH
Q 019899 244 AGLKQLGIRCSESSAGLYCWAD-MSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLV 322 (334)
Q Consensus 244 ~~l~~~g~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~ 322 (334)
+.|++.|+++..+.+++++|++ ++...+ ..++...|++++||.+.||..|+...++++|+++. .++++++++
T Consensus 310 ~~L~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~~-~~~e~i~~~ 382 (400)
T 3asa_A 310 KALLATGFEVFGGEHAPYLWVKPTQANIS------DRDLFDFFLREYHIAITPGIGFGRSGSGFVRFSSL-GKREDILAA 382 (400)
T ss_dssp HHHHHTTCEEEECSSSSEEEEECCCTTCC------TTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEECC-SCHHHHHHH
T ss_pred HHHHHCCCeeeCCCCceEEEEeccCCCCC------HHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEEee-CCHHHHHHH
Confidence 9999888888777788899999 765322 24678887777899999999887555789999964 689999999
Q ss_pred HHHHHHHHHHc
Q 019899 323 IERIQKVAETC 333 (334)
Q Consensus 323 l~~l~~~~~~~ 333 (334)
+++|+++++++
T Consensus 383 l~~l~~~~~~~ 393 (400)
T 3asa_A 383 CERLQMAPALQ 393 (400)
T ss_dssp HHHHHC-----
T ss_pred HHHHHHHHHhh
Confidence 99999988763
No 66
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=100.00 E-value=3.5e-38 Score=281.90 Aligned_cols=288 Identities=16% Similarity=0.209 Sum_probs=234.9
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccH
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
++|+.+..+ +++++++|++|+|+++++..++.+++++||+|+++.|+|+++...++ ..|.+++.+|. ++++.+|+
T Consensus 79 a~~l~~~~g--~~~~~~~v~~~~G~~~al~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~-~~g~~~~~v~~--~~~~~~d~ 153 (369)
T 3cq5_A 79 AAYITKQTG--VAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAK-GTHTEFIAVSR--GADFRIDM 153 (369)
T ss_dssp HHHHHHHHC--CCCCGGGEEEESHHHHHHHHHHHHHCSTTCEEEEEESSCTHHHHHHH-HTTCEEEEEEC--CTTSSCCH
T ss_pred HHhhhhccc--CCCChHhEEECCChHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHH-HcCCEEEEecC--CcCCCCCH
Confidence 455665555 67788999999999999999999999999999999999999999888 89999999996 35568999
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
+++++++++. ++++|++++|+||||.++|.+++.+++ +.+++++|+||+|+.+.++ .+...+..
T Consensus 154 ~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~~~~l~~l~---~~~~~~li~De~~~~~~~~----~~~~~~~~---- 217 (369)
T 3cq5_A 154 DVALEEIRAK-----QPDIVFVTTPNNPTGDVTSLDDVERII---NVAPGIVIVDEAYAEFSPS----PSATTLLE---- 217 (369)
T ss_dssp HHHHHHHHHH-----CCSEEEEESSCTTTCCCCCHHHHHHHH---HHCSSEEEEECTTGGGCCS----CCGGGGTT----
T ss_pred HHHHHHhhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHH---HhCCCEEEEECCchhhcCC----cchHHHHh----
Confidence 9999999863 688999999999999999955555554 5556999999999987753 12222211
Q ss_pred CCC-cEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 019899 162 DKD-RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYD 240 (334)
Q Consensus 162 ~~~-~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (334)
..+ +++++.|+||.+|++|+|+||+++ ++++.+.+......++.+++.+.++..+++.. +++.+.+++++++++
T Consensus 218 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~ 292 (369)
T 3cq5_A 218 KYPTKLVVSRTMSKAFDFAGGRLGYFVA-NPAFIDAVMLVRLPYHLSALSQAAAIVALRHS----ADTLGTVEKLSVERV 292 (369)
T ss_dssp TCTTTEEEEEESSSTTSCGGGCCEEEEE-CTHHHHHHHTTSCTTCSCHHHHHHHHHHHHTH----HHHHTHHHHHHHHHH
T ss_pred hCCCCEEEEEechHhcCCcccceEEEEe-CHHHHHHHHHcCCCCCCCHHHHHHHHHHhcCH----HHHHHHHHHHHHHHH
Confidence 145 889999999999989999999999 67888888877777889999999988888763 345677888899999
Q ss_pred HHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHH
Q 019899 241 SFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIP 320 (334)
Q Consensus 241 ~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~ 320 (334)
++.+.|++.|+++..+ .+.++|++++. +..++...| .++||.+.||. .++++|++++ ++++++
T Consensus 293 ~l~~~L~~~g~~~~~~-~~~~~~~~~~~--------~~~~l~~~l-~~~gi~v~~~~-----~~~~iRis~~--~~~~i~ 355 (369)
T 3cq5_A 293 RVAARLEELGYAVVPS-ESNFVFFGDFS--------DQHAAWQAF-LDRGVLIRDVG-----IAGHLRTTIG--VPEEND 355 (369)
T ss_dssp HHHHHHHHHTCEEECC-SSSEEEEECCS--------SHHHHHHHH-HHTTEECBCCS-----CTTEEEEECC--CHHHHH
T ss_pred HHHHHHHhCCCEECCC-CCeEEEEECCC--------CHHHHHHHH-HHCCEEEEECC-----CCCeEEEEeC--CHHHHH
Confidence 9999998888887644 55677888861 345778875 56899999982 2578999998 889999
Q ss_pred HHHHHHHHHHHH
Q 019899 321 LVIERIQKVAET 332 (334)
Q Consensus 321 ~~l~~l~~~~~~ 332 (334)
++++.|+++++.
T Consensus 356 ~~~~~l~~~~~~ 367 (369)
T 3cq5_A 356 AFLDAAAEIIKL 367 (369)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHhc
Confidence 999999998754
No 67
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=100.00 E-value=3.9e-39 Score=291.92 Aligned_cols=285 Identities=18% Similarity=0.247 Sum_probs=231.0
Q ss_pred CCcEE--EecCcHHHHHHHH---HHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHH
Q 019899 17 PSQIV--LTAGATPAVEILC---FCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQA 91 (334)
Q Consensus 17 ~~~i~--~~~g~~~~~~~~~---~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~ 91 (334)
+++|. .+.++++++..+. .+++++||+|++++|+|.++...++ ..|.+++.+++.+++++.+|++++++++++.
T Consensus 102 ~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 180 (409)
T 4eu1_A 102 DGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFA-KAGMELTPYSYYDPATKGLNLAGMLECLDKA 180 (409)
T ss_dssp TTCEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHH-HTTCEEEEECCEETTTTEECHHHHHHHHHHS
T ss_pred cCceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHH-HcCCeEEEEEeecCcCCcCcHHHHHHHHHhC
Confidence 67884 4899999988764 4456899999999999999999999 8999999999865577899999999999742
Q ss_pred HHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCC--CcchhhhhhhccccCCCcEEEE
Q 019899 92 RKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNE--EFVSMAEILEAEEVDKDRVHII 169 (334)
Q Consensus 92 ~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 169 (334)
..+++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+++.+++. ...++..+.. ..++++++
T Consensus 181 ---~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~----~~~~~i~~ 253 (409)
T 4eu1_A 181 ---PEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVD----MVPNLIVA 253 (409)
T ss_dssp ---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHT----TSSCCEEE
T ss_pred ---CCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHh----hCCcEEEE
Confidence 12456677799999999999999999999999999999999999999888652 1233333322 15778999
Q ss_pred ecccccCCCCCceEEEE--eecCHH----HHHHHHHhh--cccCCChHHHHHHHHhhCChHHH---HHHHHHHHHHHHHH
Q 019899 170 YGLSKDLSLPGFRTGVI--YSYNES----VLAAAKKLT--RFCSISAPTQRLLISMLSDTKFI---QEYLETNKRRIKKL 238 (334)
Q Consensus 170 ~s~sK~~~~~g~r~g~i--~~~~~~----~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~ 238 (334)
+|+||.+|++|+|+||+ ++.+++ +.+.++... ...+.+++.+.++..++...+.. .+.+.+++++++++
T Consensus 254 ~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 333 (409)
T 4eu1_A 254 QSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEV 333 (409)
T ss_dssp EECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCcccccCccCCceEEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999997 555777 556665543 23466789999999988875421 33467888999999
Q ss_pred HHHHHHHHHhCC----CcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCC
Q 019899 239 YDSFVAGLKQLG----IRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSL 314 (334)
Q Consensus 239 ~~~~~~~l~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~ 314 (334)
++++.+.|++.| +++..+.+++++|++++ .+++..+++++||.+.|| .|++++..
T Consensus 334 ~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ll~~~gv~v~p~----------~Ri~~~~~ 392 (409)
T 4eu1_A 334 RKRLVSELKACGSVHDWSHIERQVGMMAYTGLT-----------REQVELLRSEYHIYMTLN----------GRAAVSGL 392 (409)
T ss_dssp HHHHHHHHHHTTCCSCCHHHHHSCSSEEECCCC-----------HHHHHHHHHHHCEECCTT----------CEEEGGGC
T ss_pred HHHHHHHHHhcCCCCCcceecCCceEEEEeCCC-----------HHHHHHHHHcCCEEEcCC----------CEEEEEec
Confidence 999999999987 77778889999997654 356778788899999885 28999877
Q ss_pred CcccHHHHHHHHHHHH
Q 019899 315 THEDIPLVIERIQKVA 330 (334)
Q Consensus 315 ~~~~l~~~l~~l~~~~ 330 (334)
+++++++++++|++++
T Consensus 393 ~~~~i~~~~~~l~~~l 408 (409)
T 4eu1_A 393 NSTNVEYVSQAIHNVT 408 (409)
T ss_dssp CTTTHHHHHHHHHHHH
T ss_pred CHhhHHHHHHHHHHHh
Confidence 8899999999999876
No 68
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=100.00 E-value=6.8e-39 Score=293.41 Aligned_cols=311 Identities=19% Similarity=0.268 Sum_probs=241.9
Q ss_pred ChhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCC--------------eEEec-CCCCCChhhh------hh
Q 019899 1 MAGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGN--------------ALLVP-SPYYPGFDRD------IR 59 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd--------------~vl~~-~p~~~~~~~~------~~ 59 (334)
+|+|+.+.++ +++++++|++|+|+++++.+++.+++++|| +|+++ +|+|+.+... +.
T Consensus 92 ia~~l~~~~g--~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~~~~ 169 (444)
T 3if2_A 92 LVGFFNRHYD--WNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFA 169 (444)
T ss_dssp HHHHHHHHHC--CCCCGGGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSSSCCEE
T ss_pred HHHHHHhhcC--CCCCHHHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhcccccchhh
Confidence 3567766666 678899999999999999999999998888 78876 9999998774 33
Q ss_pred hccCcEEEEEeCCCCC---CccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEe
Q 019899 60 FRTGVELIPVHCRSTD---NFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISD 136 (334)
Q Consensus 60 ~~~g~~v~~v~~~~~~---~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D 136 (334)
..|..++.+++++++ ++.+|+++|+++++.. ..++++|++++|+||||.++|.+++++|+++|++||++||+|
T Consensus 170 -~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~---~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~D 245 (444)
T 3if2_A 170 -AVLPHIDEVTHDGEEGFFKYRVDFEALENLPALK---EGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIID 245 (444)
T ss_dssp -ECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHH---TTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred -ccCceEEecccccccCccccCCCHHHHHHHHHhc---CCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEE
Confidence 567888888874322 3679999999985421 137899999999999999999999999999999999999999
Q ss_pred ccccccccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHH
Q 019899 137 EIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLL 214 (334)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 214 (334)
|+|+.+.. +........ . ..++++++.|+||. +++|+|+||+++ ++++.+.+..... .++.+++.+.++
T Consensus 246 e~~~~~~~-~~~~~~~~~-----~-~~~~~i~~~S~sK~-~~~G~r~G~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~a~ 316 (444)
T 3if2_A 246 NAYGMPFP-NIIYSDAHL-----N-WDNNTILCFSLSKI-GLPGMRTGIIVA-DAKVIEAVSAMNAVVNLAPTRFGAAIA 316 (444)
T ss_dssp CTTCTTTT-CCBCSCCCC-----C-CCTTEEEEEESTTT-TCGGGCCEEEEC-CHHHHHHHHHHHHHHHSSCCCHHHHHH
T ss_pred CCCCCccc-ccccccccc-----c-CCCCEEEEechhhc-cCCCCceEEEEE-CHHHHHHHHHHHHhccCCCChHHHHHH
Confidence 99975321 111111100 0 15789999999997 679999999998 8899888876544 357788999999
Q ss_pred HHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcC
Q 019899 215 ISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL----GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAK 290 (334)
Q Consensus 215 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g 290 (334)
..++...++........++.++++++.+.+.|.+. ++.+..+.+++++|++++... .+..++...| +++|
T Consensus 317 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~l~~~l-~~~g 390 (444)
T 3if2_A 317 TPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLWLWFKDLP-----ISTLDLYERL-KAKG 390 (444)
T ss_dssp HHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCCBSSEEEEEETTCS-----SCHHHHHHHH-HHTT
T ss_pred HHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecCCccEEEEEEcCCCC-----CCHHHHHHHH-HHCC
Confidence 99988766533332336777888888888877663 566777889999999998621 1346777774 6689
Q ss_pred eEEcCCCCcCCCC--------CCeEEEEecCCCcccHHHHHHHHHHHHHHc
Q 019899 291 INVTPGSACHCIE--------PGWFRCCFTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 291 i~v~~g~~~~~~~--------~~~iRi~~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
|.+.||+.|+... ++++|++++. +++++++++++|++++++.
T Consensus 391 i~v~~g~~~~~~~~~~~~~~~~~~iRis~~~-~~e~i~~~l~~l~~~~~~~ 440 (444)
T 3if2_A 391 TLIVPSEYFFPGVDVSDYQHAHECIRMSIAA-DEQTLIDGIKVIGEVVREL 440 (444)
T ss_dssp EECEEGGGSCTTCCCTTCSGGGSEEEEESSS-CHHHHHHHHHHHHHHHHHH
T ss_pred eEEecchhhcCCCCCcccccCCCeEEEEEeC-CHHHHHHHHHHHHHHHHHH
Confidence 9999999885431 2689999995 9999999999999998763
No 69
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=100.00 E-value=8.9e-39 Score=289.87 Aligned_cols=290 Identities=16% Similarity=0.211 Sum_probs=231.0
Q ss_pred CCCCcEEE--ecCcHHHHHHHH--HHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHH
Q 019899 15 FDPSQIVL--TAGATPAVEILC--FCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQ 90 (334)
Q Consensus 15 ~~~~~i~~--~~g~~~~~~~~~--~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~ 90 (334)
+++++|++ |+|+++++.+++ ..++++||+|+++.|+|+++...++ ..|.+++.++..+++++.+|++++++++++
T Consensus 94 ~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~ 172 (412)
T 1yaa_A 94 LQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFE-NQGLKTATYPYWANETKSLDLNGFLNAIQK 172 (412)
T ss_dssp HHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHH-TTTCCEEEEECEETTTTEECHHHHHHHHHH
T ss_pred CCcceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHH-HcCceEEEEeeecCCCCccCHHHHHHHHHh
Confidence 46889999 999999999883 4445799999999999999999998 889999999973234678999999999976
Q ss_pred HHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCC--CCcchhhhhhhccccCCC---c
Q 019899 91 ARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGN--EEFVSMAEILEAEEVDKD---R 165 (334)
Q Consensus 91 ~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~ 165 (334)
. ..+..++++++|+||||.+++.+++++|+++|+++|+++|+||+|+++.+++ ....++..+... .+ +
T Consensus 173 ~---~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 245 (412)
T 1yaa_A 173 A---PEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEK----LSTVSP 245 (412)
T ss_dssp S---CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHH----TTTTCC
T ss_pred C---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhc----CCCCcc
Confidence 2 1124445559999999999999999999999999999999999999988754 122334333321 34 7
Q ss_pred EEEEecccccCCCCCceEEEEe--e----cCHH----HHHHHHHh-hcc-cCCChHHHHHHHHhhCChHH---HHHHHHH
Q 019899 166 VHIIYGLSKDLSLPGFRTGVIY--S----YNES----VLAAAKKL-TRF-CSISAPTQRLLISMLSDTKF---IQEYLET 230 (334)
Q Consensus 166 ~~~~~s~sK~~~~~g~r~g~i~--~----~~~~----~~~~~~~~-~~~-~~~~~~~~~~~~~~l~~~~~---~~~~~~~ 230 (334)
++++.|+||.+|++|+|+||++ + ++++ +++.+... ... .+.+++.+.++..++...++ ..+++.+
T Consensus 246 ~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 325 (412)
T 1yaa_A 246 VFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKDMVT 325 (412)
T ss_dssp EEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred eEEEeccCCCCCCcCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 8999999999997799999998 6 2555 77777653 333 34588999999999877542 1356788
Q ss_pred HHHHHHHHHHHHHHHHHhCC----CcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCe
Q 019899 231 NKRRIKKLYDSFVAGLKQLG----IRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGW 306 (334)
Q Consensus 231 ~~~~~~~~~~~~~~~l~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~ 306 (334)
.+++++++++++.+.|++++ +++..+.+|+++|+.++ ...+ ..+++++||.+.| +
T Consensus 326 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~-~~~l~~~gi~v~~----------~ 384 (412)
T 1yaa_A 326 MSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGLT----------PQMV-KRLEETHAVYLVA----------S 384 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCCC----------HHHH-HHHHHHHCEECCT----------T
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCCeeeeccCceEEEeeCCC----------HHHH-HHHHHhCCEEecc----------C
Confidence 89999999999999999876 88878889999987653 1234 6667778999986 3
Q ss_pred EEEEecCCCcccHHHHHHHHHHHHHHc
Q 019899 307 FRCCFTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 307 iRi~~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
+|++++..+++++++++++|+++++..
T Consensus 385 ~Ris~~~~~~~~i~~~~~~l~~~~~~~ 411 (412)
T 1yaa_A 385 GRASIAGLNQGNVEYVAKAIDEVVRFY 411 (412)
T ss_dssp SEEEGGGCCTTTHHHHHHHHHHHHHHC
T ss_pred cEEEEccCCHhHHHHHHHHHHHHHHhh
Confidence 699998669999999999999998754
No 70
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=100.00 E-value=9.4e-39 Score=289.69 Aligned_cols=290 Identities=18% Similarity=0.218 Sum_probs=235.7
Q ss_pred CCCcEEE--ecCcHHHHHHHHH--HhcCCC-----CeEEecCCCCCChhhhhhhccCcE-EEEEeCCCCCCccccHHHHH
Q 019899 16 DPSQIVL--TAGATPAVEILCF--CLADHG-----NALLVPSPYYPGFDRDIRFRTGVE-LIPVHCRSTDNFAFSITALD 85 (334)
Q Consensus 16 ~~~~i~~--~~g~~~~~~~~~~--~l~~~g-----d~vl~~~p~~~~~~~~~~~~~g~~-v~~v~~~~~~~~~~~~~~l~ 85 (334)
++++|++ |+|+++++..++. .++++| |+|+++.|+|+++...++ ..|.+ ++.+++.+++++.+|+++++
T Consensus 96 ~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~~~~~d~~~l~ 174 (412)
T 1ajs_A 96 QEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFT-TAGFKDIRSYRYWDTEKRGLDLQGFL 174 (412)
T ss_dssp HTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHH-HTTCSCEEEEECEETTTTEECHHHHH
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHH-HcCCceeEEEeeecCCCCccCHHHHH
Confidence 6789999 9999999999954 456789 999999999999999988 88999 99999754467789999999
Q ss_pred HHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCC--CCcchhhhhhhccccCC
Q 019899 86 QAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGN--EEFVSMAEILEAEEVDK 163 (334)
Q Consensus 86 ~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 163 (334)
+++++. +.+++++++++|+||||.+++.+++++|+++|++||+++|+||+|+++.+++ ....++..+.. ..
T Consensus 175 ~~l~~~---~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~----~~ 247 (412)
T 1ajs_A 175 SDLENA---PEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVS----EG 247 (412)
T ss_dssp HHHHHS---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHH----TT
T ss_pred HHHHhC---CCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhc----cC
Confidence 998752 2256778889999999999999999999999999999999999999988754 12334444432 15
Q ss_pred CcEEEEecccccCCCCCceEEEEee--cCHH----HHHHHHH-hhcccC-CChHHHHHHHHhhCChHHH---HHHHHHHH
Q 019899 164 DRVHIIYGLSKDLSLPGFRTGVIYS--YNES----VLAAAKK-LTRFCS-ISAPTQRLLISMLSDTKFI---QEYLETNK 232 (334)
Q Consensus 164 ~~~~~~~s~sK~~~~~g~r~g~i~~--~~~~----~~~~~~~-~~~~~~-~~~~~~~~~~~~l~~~~~~---~~~~~~~~ 232 (334)
++++++.|+||.+|++|+|+||+++ ++++ +.+.+.. ....+. .+++.+.++..+++..++. .+++.+.+
T Consensus 248 ~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 327 (412)
T 1ajs_A 248 FELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMA 327 (412)
T ss_dssp CCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHH
T ss_pred CcEEEEEecccccCCCCcceEEEEEecCCHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHcCcchhHHHHHHHHHHH
Confidence 7889999999999978999999998 3565 4444444 233444 5889999999988775311 34668888
Q ss_pred HHHHHHHHHHHHHHHhCC----CcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEE
Q 019899 233 RRIKKLYDSFVAGLKQLG----IRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFR 308 (334)
Q Consensus 233 ~~~~~~~~~~~~~l~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iR 308 (334)
++++++++++.+.|++.+ +++..+.+|+++|++++ .+....+++++||.+.|+ +|
T Consensus 328 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~~gv~v~~~----------~R 386 (412)
T 1ajs_A 328 DRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLN-----------PKQVEYLINQKHIYLLPS----------GR 386 (412)
T ss_dssp HHHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCCC-----------HHHHHHHHHTTCEECCTT----------SE
T ss_pred HHHHHHHHHHHHHHHhhCCCCCeeEEcCCCceEEEeCCC-----------HHHHHHHHHhCCEEecCC----------cE
Confidence 999999999999999886 77777888999988664 256666687899999873 59
Q ss_pred EEecCCCcccHHHHHHHHHHHHHHcC
Q 019899 309 CCFTSLTHEDIPLVIERIQKVAETCK 334 (334)
Q Consensus 309 i~~~~~~~~~l~~~l~~l~~~~~~~~ 334 (334)
++++..+++++++++++|++++++.+
T Consensus 387 is~~~~~~~~i~~~~~~l~~~l~~~~ 412 (412)
T 1ajs_A 387 INMCGLTTKNLDYVATSIHEAVTKIQ 412 (412)
T ss_dssp EEGGGCCTTTHHHHHHHHHHHHHHCC
T ss_pred EEeeeCCHHHHHHHHHHHHHHHHhcC
Confidence 99986699999999999999998753
No 71
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=3.1e-39 Score=293.28 Aligned_cols=306 Identities=19% Similarity=0.273 Sum_probs=233.2
Q ss_pred ChhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCC-----eEEec-CCCCCChhhhhhh-----ccCcEEEEE
Q 019899 1 MAGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGN-----ALLVP-SPYYPGFDRDIRF-----RTGVELIPV 69 (334)
Q Consensus 1 i~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd-----~vl~~-~p~~~~~~~~~~~-----~~g~~v~~v 69 (334)
+|+|+.+..+ +++++++|++|+|+++++.+++.+++++|| +|+++ +|+|+++...+.. ..+..+..+
T Consensus 84 ia~~~~~~~g--~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (417)
T 3g7q_A 84 LAVLLRETLG--WDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELL 161 (417)
T ss_dssp HHHHHHHHHC--CCCCGGGEEEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEE
T ss_pred HHHHHHHHhC--CCCCcccEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccccCccccc
Confidence 3567766666 678899999999999999999999999987 89997 9999988765420 133445555
Q ss_pred eCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCc
Q 019899 70 HCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEF 149 (334)
Q Consensus 70 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~ 149 (334)
+.. ..++.+|+++++ +++ +++++++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.. +...
T Consensus 162 ~~~-~~~~~~d~~~l~--~~~------~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~-~~~~ 231 (417)
T 3g7q_A 162 PEG-QFKYHVDFEHLH--IGE------ETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFP-GIIF 231 (417)
T ss_dssp GGG-EEEEECCGGGCC--CCT------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTT-CCBC
T ss_pred CCc-ccccccCHHHhc--ccc------CceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccc-cccc
Confidence 421 124678988887 443 789999999999999999999999999999999999999999976321 1111
Q ss_pred chhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc--cCCChHHHHHHHHhhCChHHHHHH
Q 019899 150 VSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--CSISAPTQRLLISMLSDTKFIQEY 227 (334)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~ 227 (334)
.... . + ..++++++.|+|| ++++|+|+||+++ ++++.+.+...... ++.+++.+.++..++...++....
T Consensus 232 ~~~~---~--~-~~~~~i~~~s~sK-~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 303 (417)
T 3g7q_A 232 SEAR---P--L-WNPNIILCMSLSK-LGLPGSRCGIIIA-NDKTITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLS 303 (417)
T ss_dssp SCCC---C--C-CCTTEEEEEESGG-GTCTTSCCEEEEC-CHHHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHHHHH
T ss_pred cccc---c--C-CCCCEEEEEechh-ccCCCcceEEEEe-CHHHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchHHHH
Confidence 1111 0 1 1578999999999 5779999999998 89999988876543 457889999999998876543322
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC----CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCC
Q 019899 228 LETNKRRIKKLYDSFVAGLKQL----GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIE 303 (334)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~l~~~----g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~ 303 (334)
...+++.++++++.+.+.|++. ++.+..+.+|+++|++++... .+..++...| .++||.+.||..|+...
T Consensus 304 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~l~~~l-~~~gi~v~~g~~f~~~~ 377 (417)
T 3g7q_A 304 ETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGAIFLWLWFKDLP-----ITTELLYQRL-KARGVLMVPGHYFFPGL 377 (417)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECCCBSSEEEEECTTCS-----SCHHHHHHHH-HHTTEECEEGGGGCTTB
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCCceeeCCCcceEEEEEcCCCC-----CCHHHHHHHH-HHCCEEEECchhhCCCC
Confidence 2236777888888888888663 577778889999999998621 1346788875 66899999999886542
Q ss_pred -------CCeEEEEecCCCcccHHHHHHHHHHHHHHc
Q 019899 304 -------PGWFRCCFTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 304 -------~~~iRi~~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
++++|++++. +++++++++++|++++++.
T Consensus 378 ~~~~~~~~~~iRis~~~-~~~~i~~~~~~l~~~l~~~ 413 (417)
T 3g7q_A 378 DKPWPHTHQCMRMNYVP-EPDKIEAGVKILAEEIERA 413 (417)
T ss_dssp SSCCGGGGGEEEEESCS-CHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCeEEEEecC-CHHHHHHHHHHHHHHHHHH
Confidence 4699999994 9999999999999998764
No 72
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=100.00 E-value=2.9e-38 Score=289.22 Aligned_cols=290 Identities=17% Similarity=0.198 Sum_probs=234.3
Q ss_pred CCcEEE--ecCcHHHHHH--HHHHhcCCCCeEEecCCCCCChhhhhhh---ccCcEEEEEeCCCCC-CccccHHHHHHHH
Q 019899 17 PSQIVL--TAGATPAVEI--LCFCLADHGNALLVPSPYYPGFDRDIRF---RTGVELIPVHCRSTD-NFAFSITALDQAF 88 (334)
Q Consensus 17 ~~~i~~--~~g~~~~~~~--~~~~l~~~gd~vl~~~p~~~~~~~~~~~---~~g~~v~~v~~~~~~-~~~~~~~~l~~~l 88 (334)
+++|++ |+|+++++.. .+.+++.+||+|++++|+|.++...++. ..|.+++.+++.+++ ++.+|++++++++
T Consensus 117 ~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~~~~~d~e~l~~~l 196 (448)
T 3meb_A 117 EGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDFSNTKKDI 196 (448)
T ss_dssp TTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEECCBCTTSCSSBCHHHHHHHH
T ss_pred cCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEEeccccccCCCcCHHHHHHHH
Confidence 689999 9999999987 5566778999999999999999887652 568999999985445 6899999999999
Q ss_pred HHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCC--CcchhhhhhhccccCCCcE
Q 019899 89 NQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNE--EFVSMAEILEAEEVDKDRV 166 (334)
Q Consensus 89 ~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 166 (334)
++. ..+++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+++.+++. ...++..+.. ...++
T Consensus 197 ~~~---~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~----~~~~~ 269 (448)
T 3meb_A 197 QSA---PEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVD----AGVEV 269 (448)
T ss_dssp HHS---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHH----TTCCE
T ss_pred HhC---CCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhh----cCCcE
Confidence 852 12577889999999999999999999999999999999999999999887641 1233333322 15788
Q ss_pred EEEecccccCCCCCceEEEE--ee--------cCH----HHHHHHHHhh--cccCCChHHHHHHHHhhCChHHH---HHH
Q 019899 167 HIIYGLSKDLSLPGFRTGVI--YS--------YNE----SVLAAAKKLT--RFCSISAPTQRLLISMLSDTKFI---QEY 227 (334)
Q Consensus 167 ~~~~s~sK~~~~~g~r~g~i--~~--------~~~----~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~---~~~ 227 (334)
+++.|+||.+|++|+|+||+ ++ +++ .+.+.+.... ...+.+.+.+.++..++...++. .+.
T Consensus 270 i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~ 349 (448)
T 3meb_A 270 LVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHDKRLLQMFYDN 349 (448)
T ss_dssp EEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHH
T ss_pred EEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccCCccHHHHHHHHHHhcChHHHHHHHHH
Confidence 99999999999999999998 65 456 5555555432 23356789999999999876432 234
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC---C------CcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCC
Q 019899 228 LETNKRRIKKLYDSFVAGLKQL---G------IRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSA 298 (334)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~l~~~---g------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~ 298 (334)
+.+++++++++++++.+.|++. + +....+.+++++|..++ .+++..+++++||.+.||+
T Consensus 350 ~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----------~~~~~~ll~~~gV~v~~G~- 417 (448)
T 3meb_A 350 VKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAIGMFTFTGLT-----------PEHVDYLKEKWSIYLVKAG- 417 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHHCCSSEEECCCC-----------HHHHHHHHHHHCEEECSGG-
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCCCceEEEecCCC-----------HHHHHHHHHhCCEEEeCCC-
Confidence 6888899999999999999987 3 55567889999998774 3677887888999999976
Q ss_pred cCCCCCCeEEEEecCCCcccHHHHHHHHHHHHHHc
Q 019899 299 CHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 299 ~~~~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
.|+|++..+++++++++++|+++++++
T Consensus 418 --------gRis~a~~~~~~i~~~~~~l~~~l~~~ 444 (448)
T 3meb_A 418 --------GRMSMCGLTESNCDYVAEAIHDAVTKL 444 (448)
T ss_dssp --------GEEEGGGCCTTTHHHHHHHHHHHHHHS
T ss_pred --------cEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 299998668889999999999999865
No 73
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=4.3e-38 Score=277.72 Aligned_cols=280 Identities=17% Similarity=0.252 Sum_probs=225.2
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITAL 84 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l 84 (334)
+++.+++.+++++++|++|+|+++++..++..+ +||+|++++|+|.++...++ ..|.+++.++++ +++.+|++++
T Consensus 56 lr~~la~~~~~~~~~i~~t~G~~~~l~~~~~~~--~gd~vl~~~p~~~~~~~~~~-~~g~~~~~v~~~--~~~~~d~~~l 130 (337)
T 3p1t_A 56 VMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRARIA-VSGLRHFEIGLT--DDLLLDPNDL 130 (337)
T ss_dssp HHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHS--TTSEEEEESSSCSHHHHHHT-TSCCEEEEECBC--TTSSBCHHHH
T ss_pred HHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHhc--CCCeEEEeCCCcHHHHHHHH-HcCCEEEEecCC--CCCCCCHHHH
Confidence 344444555678889999999999999999988 99999999999999999998 899999999983 4578999998
Q ss_pred HHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCC
Q 019899 85 DQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKD 164 (334)
Q Consensus 85 ~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (334)
+++ . +++++++++|+||||.++| ++++.++|+++++ +|+||+|+.+.+.+.... . ..+
T Consensus 131 ~~~--~------~~~~v~i~~p~nptG~~~~---~~~l~~l~~~~~~-~ivDea~~~~~~~~~~~~-----~-----~~~ 188 (337)
T 3p1t_A 131 AQV--S------RDDCVVLANPSNPTGQALS---AGELDQLRQRAGK-LLIDETYVDYSSFRARGL-----A-----YGE 188 (337)
T ss_dssp TTC--C------TTEEEEEESSCTTTCCCCC---HHHHHHHHHHCSE-EEEECTTGGGSSCSSSCC-----C-----CBT
T ss_pred Hhh--c------CCCEEEEeCCCCCCCCCCC---HHHHHHHHHhCCc-EEEECCChhhcccccccc-----c-----cCC
Confidence 875 1 5789999999999999999 5555666677887 566999998665332111 1 157
Q ss_pred cEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHH
Q 019899 165 RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVA 244 (334)
Q Consensus 165 ~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (334)
+++++.|+||.+|++|+|+||+++ ++++.+.++.....++.+.+.+.++..+++..++ +.+..+++.++++++.+
T Consensus 189 ~~i~~~S~sK~~g~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~ 263 (337)
T 3p1t_A 189 NELVFRSFSKSYGLAGLRLGALFG-PSELIAAMKRKQWFCNVGTLDLHALEAALDNDRA----REAHIAKTLAQRRRVAD 263 (337)
T ss_dssp TEEEEEESSSTTCCTTTCCEEEEC-CHHHHHHHHTTSCTTCSCHHHHHHHHHHHTCHHH----HHHHHHHHHHHHHHHHH
T ss_pred CEEEEeeCchhccCcchheEEEEe-CHHHHHHHHhhcCCCCCCHHHHHHHHHHhCCHHH----HHHHHHHHHHHHHHHHH
Confidence 789999999999999999999998 8899999988777788999999999999987443 23445556677889999
Q ss_pred HHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHHH
Q 019899 245 GLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIE 324 (334)
Q Consensus 245 ~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l~ 324 (334)
.|+++|+++..+.+++ +|+..+.. .++... ++++||.+.||..|+. ++++|++++ ++++++++++
T Consensus 264 ~L~~~g~~~~~~~~~~-~~~~~~~~---------~~~~~~-l~~~gi~v~~g~~~~~--~~~iRis~~--~~~~~~~l~~ 328 (337)
T 3p1t_A 264 ALRGLGYRVASSEANF-VLVENAAG---------ERTLRF-LRERGIQVKDAGQFGL--HHHIRISIG--REEDNDRLLA 328 (337)
T ss_dssp HHHHTTCCBCCCSSSE-EEEECTTT---------HHHHHH-HHHTTEECEEGGGGTC--CSEEEEECC--CHHHHHHHHH
T ss_pred HHHHCcCEECCCCCeE-EEEEcCCH---------HHHHHH-HHHCCeEEEECccCCC--CCeEEEecC--CHHHHHHHHH
Confidence 9999888887776664 55665531 355555 6678999999998875 689999998 7899999999
Q ss_pred HHHHHHH
Q 019899 325 RIQKVAE 331 (334)
Q Consensus 325 ~l~~~~~ 331 (334)
.|+++.+
T Consensus 329 al~~~~~ 335 (337)
T 3p1t_A 329 ALAEYSD 335 (337)
T ss_dssp HHHHHTC
T ss_pred HHHHHhh
Confidence 9998764
No 74
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=100.00 E-value=1.6e-38 Score=286.71 Aligned_cols=287 Identities=17% Similarity=0.207 Sum_probs=230.0
Q ss_pred CCCCcEEE--ecCcHHHHHHHHHHh--cCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHH
Q 019899 15 FDPSQIVL--TAGATPAVEILCFCL--ADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQ 90 (334)
Q Consensus 15 ~~~~~i~~--~~g~~~~~~~~~~~l--~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~ 90 (334)
+++++|++ |+|+++++..++..+ +.+||+|++++|+|+++...++ ..|.+++.++..+++++.+|++++++++++
T Consensus 90 ~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~ 168 (396)
T 2q7w_A 90 INDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFN-SAGLEVREYAYYDAENHTLDFDALINSLNE 168 (396)
T ss_dssp HHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHH-HTTCEEEEEECEETTTTEECHHHHHHHHTT
T ss_pred cccccEEEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHH-HcCCceEEEecccCCCCCcCHHHHHHHHHh
Confidence 35789998 999999999998766 4699999999999999999998 899999999975446678999999999874
Q ss_pred HHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCC-CCcchhhhhhhccccCCCcEEEE
Q 019899 91 ARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGN-EEFVSMAEILEAEEVDKDRVHII 169 (334)
Q Consensus 91 ~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 169 (334)
. ..+++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+.+.+++ ....++..+... .++++++
T Consensus 169 ~---~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~ 241 (396)
T 2q7w_A 169 A---QAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM----HKELIVA 241 (396)
T ss_dssp C---CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHH----CSCEEEE
T ss_pred C---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhc----CCcEEEE
Confidence 1 1246778889999999999999999999999999999999999999988753 122344444331 4688999
Q ss_pred ecccccCCCCCceEEEEee--cCH----HHHHHHHHh-hccc-CCChHHHHHHHHhhCChH---HHHHHHHHHHHHHHHH
Q 019899 170 YGLSKDLSLPGFRTGVIYS--YNE----SVLAAAKKL-TRFC-SISAPTQRLLISMLSDTK---FIQEYLETNKRRIKKL 238 (334)
Q Consensus 170 ~s~sK~~~~~g~r~g~i~~--~~~----~~~~~~~~~-~~~~-~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~ 238 (334)
.|+||.+|++|+|+||+++ +++ ++.+.+... ...+ +.+++.+.++..+++... ...+++++.+++++++
T Consensus 242 ~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~ 321 (396)
T 2q7w_A 242 SSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRM 321 (396)
T ss_dssp EECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHH
T ss_pred EeccccccccccccceEEEEcCCHHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999986 355 455555432 2233 458899999999988752 1245677888999999
Q ss_pred HHHHHHHHHhCC----CcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCC
Q 019899 239 YDSFVAGLKQLG----IRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSL 314 (334)
Q Consensus 239 ~~~~~~~l~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~ 314 (334)
++++.+.|++.+ +++..+.+|+++|++++. +....+++++||.+.|| +|++++..
T Consensus 322 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~gv~v~~~----------~Ris~~~~ 380 (396)
T 2q7w_A 322 RQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTK-----------EQVLRLREEFGVYAVAS----------GRVNVAGM 380 (396)
T ss_dssp HHHHHHHHHHTTCCSCCTHHHHCCSSEEECCCCH-----------HHHHHHHHHHCEECCTT----------CEEEGGGC
T ss_pred HHHHHHHHHhcCCCCCcceecCCCceEEEecCCH-----------HHHHHHHHhcCeeecCC----------ceEEEeec
Confidence 999999999886 777778889999987641 44556677799999873 59999856
Q ss_pred CcccHHHHHHHHHHHH
Q 019899 315 THEDIPLVIERIQKVA 330 (334)
Q Consensus 315 ~~~~l~~~l~~l~~~~ 330 (334)
+++++++++++|++++
T Consensus 381 ~~e~i~~~~~~l~~~l 396 (396)
T 2q7w_A 381 TPDNMAPLCEAIVAVL 396 (396)
T ss_dssp CTTTHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHhcC
Confidence 9999999999998763
No 75
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=100.00 E-value=7e-38 Score=279.00 Aligned_cols=285 Identities=22% Similarity=0.338 Sum_probs=229.3
Q ss_pred hhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHH
Q 019899 6 SQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALD 85 (334)
Q Consensus 6 ~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~ 85 (334)
++.+++.+++++++|++|+|+++++..++.+++++||+|++++|+|.++...++ ..|.+++.++++ +++.+ ++++
T Consensus 71 r~~la~~~g~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~-~~g~~~~~v~~~--~~~~~--~~l~ 145 (360)
T 3hdo_A 71 REVAGELYGFDPSWIIMANGSDEVLNNLIRAFAAEGEEIGYVHPSYSYYGTLAE-VQGARVRTFGLT--GDFRI--AGFP 145 (360)
T ss_dssp HHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCTHHHHHHH-HHTCEEEEECBC--TTSSB--TTCC
T ss_pred HHHHHHHhCcCcceEEEcCCHHHHHHHHHHHHhCCCCEEEEcCCChHHHHHHHH-HCCCEEEEeeCC--CCCCH--HHHH
Confidence 344444455788999999999999999999999999999999999999999998 899999999984 33344 4443
Q ss_pred HHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCc
Q 019899 86 QAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDR 165 (334)
Q Consensus 86 ~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (334)
+.+ +++++++++|+||||.++| ++++.++|+++|+++|+||+|+.+. +....... .. .++
T Consensus 146 ~~~--------~~~~v~i~~p~nptG~~~~---~~~l~~l~~~~~~~li~De~~~~~~--~~~~~~~~--~~-----~~~ 205 (360)
T 3hdo_A 146 ERY--------EGKVFFLTTPNAPLGPSFP---LEYIDELARRCAGMLVLDETYAEFA--ESNALELV--RR-----HEN 205 (360)
T ss_dssp SSB--------CSSEEEEESSCTTTCCCCC---HHHHHHHHHHBSSEEEEECTTGGGS--SCCCTHHH--HH-----CSS
T ss_pred hhc--------CCCEEEEeCCCCCCCCCcC---HHHHHHHHHHCCCEEEEECChHhhC--CcchhHHh--cc-----CCC
Confidence 221 4679999999999999999 5667777788999999999999863 32222222 12 688
Q ss_pred EEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHH
Q 019899 166 VHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAG 245 (334)
Q Consensus 166 ~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (334)
++++.|+||.+|++|+|+||+++ ++++.+.++.....++.+++.+.++..+++.. +++.+.+++++++++++.+.
T Consensus 206 ~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~~l~~~ 280 (360)
T 3hdo_A 206 VVVTRTLSKSYSLAGMRIGLAIA-RPEVIAALDKIRDHYNLDRLAQAACVAALRDQ----AYLSECCRRIRETREWFTTE 280 (360)
T ss_dssp EEEEEESTTTTSCTTSCCEEEEC-CHHHHHHHHHHSCSCCSCHHHHHHHHHHHHCH----HHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecchHhhcCCccceeeEee-CHHHHHHHHHhCCCCCCCHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999998 89999999988888899999999999998763 34577788899999999999
Q ss_pred HHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHHHH
Q 019899 246 LKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIER 325 (334)
Q Consensus 246 l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l~~ 325 (334)
|++.++.+..+ .+.++|++++.. +..++... +.++||.+.|+... ..++++|++++ ++++++++++.
T Consensus 281 L~~~~~~~~~~-~~~~~~~~~~~~-------~~~~l~~~-l~~~gi~v~~~~~~--~~~~~iRis~~--~~~e~~~l~~a 347 (360)
T 3hdo_A 281 LRSIGYDVIPS-QGNYLFATPPDR-------DGKRVYDG-LYARKVLVRHFSDP--LLAHGMRISIG--TREEMEQTLAA 347 (360)
T ss_dssp HHHTTCEECCC-SSSEEEEECTTC-------CHHHHHHH-HHHTTEECBCCCST--TTTTSEEEECC--CHHHHHHHHHH
T ss_pred HHHCCCEEcCC-CccEEEEECCCC-------CHHHHHHH-HHHCCEEEEECCCC--CCCCEEEEEcC--CHHHHHHHHHH
Confidence 99888887655 455677877642 34677777 45689999997752 34689999998 89999999999
Q ss_pred HHHHHHHc
Q 019899 326 IQKVAETC 333 (334)
Q Consensus 326 l~~~~~~~ 333 (334)
|+++.+.+
T Consensus 348 l~~~~~~~ 355 (360)
T 3hdo_A 348 LKEIGEGH 355 (360)
T ss_dssp HHHHHC--
T ss_pred HHHHhccc
Confidence 99987653
No 76
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=100.00 E-value=2.4e-38 Score=280.92 Aligned_cols=286 Identities=17% Similarity=0.277 Sum_probs=231.4
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeC-CCCCCccccHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHC-RSTDNFAFSITA 83 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~-~~~~~~~~~~~~ 83 (334)
+++.+++.+++++++|++|+|+++++.+++.++. ||+|+++.|+|.++...++ ..|.+++.+++ ++.++ +++
T Consensus 55 lr~~la~~~~~~~~~i~~t~g~~~al~~~~~~l~--gd~Vi~~~p~~~~~~~~~~-~~g~~~~~v~~~~~~~~--~~~-- 127 (350)
T 3fkd_A 55 LRQMLAKRNSVDNNAILVTNGPTAAFYQIAQAFR--GSRSLIAIPSFAEYEDACR-MYEHEVCFYPSNEDIGE--ADF-- 127 (350)
T ss_dssp HHHHHHHHTTCCGGGEEEESHHHHHHHHHHHHTT--TCEEEEEESCCHHHHHHHH-HTTCEEEEEETTSCGGG--SCC--
T ss_pred HHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHHC--CCEEEEeCCCcHHHHHHHH-HcCCeEEEEecCCcccc--Ccc--
Confidence 4444555566788999999999999999999987 9999999999999999998 89999999998 43333 333
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCC
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDK 163 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (334)
+ +++++++++|+||||.++|.+++.+|+++|.++ +||+||+|+.+.+.+.... ..+.. .
T Consensus 128 ------~------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~--~li~Dea~~~~~~~~~~~~--~~~~~-----~ 186 (350)
T 3fkd_A 128 ------S------NMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDT--TFVLDQSYVSFTTEEVIRP--ADIKG-----R 186 (350)
T ss_dssp ------T------TCSEEEEESSCTTTCCCCCHHHHHHHHHHCTTS--EEEEECTTTTSCSSCCCCG--GGGTT-----C
T ss_pred ------C------CCCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCC--EEEEECchhhhccCcchhh--HHhhc-----C
Confidence 2 789999999999999999988888888888755 9999999999887654322 22222 6
Q ss_pred CcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHH
Q 019899 164 DRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFV 243 (334)
Q Consensus 164 ~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (334)
++++++.|+||.+|++|+|+||+++ ++++.+.++.....++.+++.+.++..+++..+ .+..+.++.. ++++++.
T Consensus 187 ~~~i~~~S~sK~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~-~~~~~l~ 261 (350)
T 3fkd_A 187 KNLVMVYSFSHAYGIPGLRIGYIVA-NKDFMKRVAAFSTPWAVNALAIEAAKFILIHPA---QFTLPIRKWQ-RNTVDFI 261 (350)
T ss_dssp SSEEEEEESHHHHSCGGGCCEEEEC-CHHHHHHHHTTCCTTCSCHHHHHHHHHHHHCTT---TTCCCHHHHH-HHHHHHH
T ss_pred CCEEEEecCchhccCcchheEeEEe-CHHHHHHHHHhCCCCCCCHHHHHHHHHHHhCHH---HHHHHHHHHH-HHHHHHH
Confidence 8899999999999999999999999 999999999888888899999999998887643 1122233333 7788899
Q ss_pred HHHHhC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHH
Q 019899 244 AGLKQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLV 322 (334)
Q Consensus 244 ~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~ 322 (334)
+.|+++ ++++..+. +.++|++++.. +..++...|++++||.+.||..|+...++++|++++ ++++++++
T Consensus 262 ~~L~~~~~~~~~~~~-~~~~~~~~~~~-------~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~~--~~~~~~~l 331 (350)
T 3fkd_A 262 TALNRLDGVEVHPSG-TTFFLLRLKKG-------TAAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQ--RPAQNQLF 331 (350)
T ss_dssp HHHHHSTTEEECCCS-SSEEEEEESSS-------CHHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECC--CHHHHHHH
T ss_pred HHHhcCCCcEECCCC-CcEEEEECCCC-------CHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEcC--CHHHHHHH
Confidence 999887 78775554 55667888753 346888886666899999999998666889999998 88899999
Q ss_pred HHHHHHHHHHc
Q 019899 323 IERIQKVAETC 333 (334)
Q Consensus 323 l~~l~~~~~~~ 333 (334)
++.|+++.++.
T Consensus 332 ~~al~~~~~~~ 342 (350)
T 3fkd_A 332 IKALETFLEKY 342 (350)
T ss_dssp HHHHHHHHTC-
T ss_pred HHHHHHHHHHh
Confidence 99999988764
No 77
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=100.00 E-value=1.8e-37 Score=279.55 Aligned_cols=285 Identities=15% Similarity=0.144 Sum_probs=227.2
Q ss_pred CCCcEEE--ecCcHHHHHHHHHHhcC--CCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHH
Q 019899 16 DPSQIVL--TAGATPAVEILCFCLAD--HGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQA 91 (334)
Q Consensus 16 ~~~~i~~--~~g~~~~~~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~ 91 (334)
++++|++ |+|+++++..++..+.. +||+|+++.|+|+++...++ ..|.+++.+++.+++++.+|++++++++++.
T Consensus 88 ~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 166 (394)
T 2ay1_A 88 KSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMN-FMGLPVQTYRYFDAETRGVDFEGMKADLAAA 166 (394)
T ss_dssp CGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHH-HHTCCEEEEECEETTTTEECHHHHHHHHHTC
T ss_pred CcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH-HcCCceEEEecccccCCccCHHHHHHHHHhC
Confidence 6789999 99999999999987754 99999999999999999888 8899999999854466789999999999751
Q ss_pred HHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCC-CcchhhhhhhccccCCCcEEEEe
Q 019899 92 RKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNE-EFVSMAEILEAEEVDKDRVHIIY 170 (334)
Q Consensus 92 ~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 170 (334)
..+++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++. ...++..+... .++++++.
T Consensus 167 ---~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~ 239 (394)
T 2ay1_A 167 ---KKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASR----IPEVLIAA 239 (394)
T ss_dssp ---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHH----CSSEEEEE
T ss_pred ---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhc----CCCEEEEE
Confidence 11367777899999999999999999999999999999999999998877531 12233333321 45789999
Q ss_pred cccccCCCCCceEEEEee--cCHHHHHH----HHHh-hccc-CCChHHHHHHHHhhCChH---HHHHHHHHHHHHHHHHH
Q 019899 171 GLSKDLSLPGFRTGVIYS--YNESVLAA----AKKL-TRFC-SISAPTQRLLISMLSDTK---FIQEYLETNKRRIKKLY 239 (334)
Q Consensus 171 s~sK~~~~~g~r~g~i~~--~~~~~~~~----~~~~-~~~~-~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~ 239 (334)
|+||.+|++|+|+||+++ +++++++. +... ...+ +.+++.+.++..+++..+ ...++..++++++++++
T Consensus 240 s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~ 319 (394)
T 2ay1_A 240 SCSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLR 319 (394)
T ss_dssp ECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eccCCCcCcCCccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999987 46655433 3321 2233 458889998888887652 22456788889999999
Q ss_pred HHHHHHHHhCC----CcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCC
Q 019899 240 DSFVAGLKQLG----IRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLT 315 (334)
Q Consensus 240 ~~~~~~l~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~ 315 (334)
+++.+.|++.+ +++..+.+|+++|++++. +....+++++||.+.|| +|++++..+
T Consensus 320 ~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~-----------~~~~~~l~~~gi~v~~~----------~Ris~~~~~ 378 (394)
T 2ay1_A 320 EQLAGELRDLSGSDRFGFVAEHRGMFSRLGATP-----------EQVKRIKEEFGIYMVGD----------SRINIAGLN 378 (394)
T ss_dssp HHHHHHHHHHHTSSTTTHHHHCCSSEEECCCCH-----------HHHHHHHHHHCEECCTT----------CEEEGGGCC
T ss_pred HHHHHHHHhcCCCCCeeEEcCCceEEEeeCCCH-----------HHHHHHHHhCCEEecCC----------CeEEeecCC
Confidence 99999998874 777777889999987642 34456677799999874 599998669
Q ss_pred cccHHHHHHHHHHH
Q 019899 316 HEDIPLVIERIQKV 329 (334)
Q Consensus 316 ~~~l~~~l~~l~~~ 329 (334)
++++++++++|+++
T Consensus 379 ~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 379 DNTIPILARAIIEV 392 (394)
T ss_dssp TTTHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHc
Confidence 99999999999875
No 78
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=100.00 E-value=2.2e-37 Score=278.52 Aligned_cols=282 Identities=15% Similarity=0.212 Sum_probs=216.1
Q ss_pred hhhhhhhhcCCCCCCC-CcEEEecCcHHHHHHHHHHhcCCCC----eEEecCCCCCChhhhhhhccCcEEEEEeCCCCCC
Q 019899 2 AGFMSQVLGQAVSFDP-SQIVLTAGATPAVEILCFCLADHGN----ALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDN 76 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~-~~i~~~~g~~~~~~~~~~~l~~~gd----~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~ 76 (334)
|+|+. ..+ +.+++ ++|++|+|+++++..++.+++++|| +|++++|+|+++...++ ..|.+++.++++. +
T Consensus 78 a~~~~-~~g--~~~~~~~~i~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~-~~g~~~~~~~~d~-~- 151 (391)
T 3bwn_A 78 KDLHG-VVG--NAATEDRYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETT-YVRSGMYKWEGDA-W- 151 (391)
T ss_dssp HHHHH-HHC--SBCCSSSEEEEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHH-TTCBTTEEEEEES-T-
T ss_pred HHHHH-hcC--CCCCCCCeEEEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHHH-HcCCeEEEecCCH-H-
Confidence 45555 334 55666 5999999999999999999999999 99999999999999998 8999988888632 1
Q ss_pred ccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhh
Q 019899 77 FAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEIL 156 (334)
Q Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~ 156 (334)
.+. . .+++++++++|+||||.+++ +|++.++.++++||+||+|.. + ...++..
T Consensus 152 -~l~--------~------~~~k~v~l~~p~NPtG~~~~-----~l~~~~~~~~~~ii~De~y~~----~-~~~~l~~-- 204 (391)
T 3bwn_A 152 -GFD--------K------KGPYIELVTSPNNPDGTIRE-----TVVNRPDDDEAKVIHDFAYYW----P-HYTPITR-- 204 (391)
T ss_dssp -TCC--------C------CSCEEEEEESSCTTTCCCCC-----CCC-----CCCEEEEECTTCS----T-TTSCCCC--
T ss_pred -HcC--------C------CCCEEEEECCCCCCCchhHH-----HHHHHhhcCCCEEEEeCCCCC----C-CCCcccc--
Confidence 222 1 27899999999999999997 344422333499999999973 1 1112211
Q ss_pred hccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCChH-H------HHHH
Q 019899 157 EAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDTK-F------IQEY 227 (334)
Q Consensus 157 ~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~-~------~~~~ 227 (334)
..+++++++||||.+|++|+|+||++++++++++.+..... .++.+++.|.++..++.... + .+++
T Consensus 205 -----~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~ 279 (391)
T 3bwn_A 205 -----RQDHDIMLFTFSKITGHAGSRIGWALVKDKEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENF 279 (391)
T ss_dssp -----CBCCSEEEEEHHHHHSCGGGCEEEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSH
T ss_pred -----CCCCeEEEEechhhcCCCccceEEEEecCHHHHHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHH
Confidence 15789999999999999999999999757889888887654 46789999999999886542 1 1456
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC-CCcccCC-------------CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEE
Q 019899 228 LETNKRRIKKLYDSFVAGLKQL-GIRCSES-------------SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINV 293 (334)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~-------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v 293 (334)
+.+.++.++++++.+.+.|+++ ++++..+ .+|+|+|++++.. +.+..+++++||.+
T Consensus 280 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~~----------~~~~~~l~~~gV~v 349 (391)
T 3bwn_A 280 FKYGREMMKNRWEKLREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKEE----------TDLVSELRRHKVMS 349 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSSEECCCCCCEEETTTTEEECCCCSEEEEEESSS----------CCHHHHHHHTTEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccCCCcceEEEecCCcH----------HHHHHHHHHCCEEE
Confidence 7888999999999999999987 5655433 4456899998741 23444577799999
Q ss_pred cCCCCcCCCCCCeEEEEecCCCcccHHHHHHHHHHHHHHc
Q 019899 294 TPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 294 ~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
.||..|+. .++++|+|++ .+++++++++++|++++++.
T Consensus 350 ~pg~~fg~-~~~~iRis~~-~~~e~i~~~~~~L~~~~~~~ 387 (391)
T 3bwn_A 350 RAGERCGS-DKKHVRVSML-SREDVFNVFLERLANMKLIK 387 (391)
T ss_dssp EEGGGGTC-CTTEEEEESC-SCHHHHHHHHHHHHSCC---
T ss_pred ccCCCCCC-CCCEEEEEec-CCHHHHHHHHHHHHHHHHhh
Confidence 99999975 4689999999 58889999999999887653
No 79
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=100.00 E-value=2e-36 Score=267.01 Aligned_cols=261 Identities=18% Similarity=0.306 Sum_probs=214.1
Q ss_pred CCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 15 FDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 15 ~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
+++++|++|+|+++++..++.++ ||+|+++ |+|+++...++ ..|.+++.+|++ +++.+|++++ +
T Consensus 74 ~~~~~v~~~~G~~~al~~~~~~~---gd~Vl~~-p~y~~~~~~~~-~~g~~~~~v~~~--~~~~~d~~~l-----~---- 137 (335)
T 1uu1_A 74 LSKNNVSVGNGADEIIYVMMLMF---DRSVFFP-PTYSCYRIFAK-AVGAKFLEVPLT--KDLRIPEVNV-----G---- 137 (335)
T ss_dssp CCGGGEEEESSHHHHHHHHHHHS---SEEEECS-SSCHHHHHHHH-HHTCEEEECCCC--TTSCCCCCCC-----C----
T ss_pred CCHHHEEEcCChHHHHHHHHHHh---CCcEEEC-CCcHHHHHHHH-HcCCeEEEeccC--CCCCCCHHHc-----C----
Confidence 67889999999999999999998 8999999 99999999888 889999999873 4467888777 2
Q ss_pred CCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEecccc
Q 019899 95 GVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSK 174 (334)
Q Consensus 95 ~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK 174 (334)
++++|++++|+||||.++|.+++++++++| | ++|+||+|+++.+. ..... +.. .++++++.|+||
T Consensus 138 --~~~~v~l~~p~nptG~~~~~~~l~~l~~~~---~-~li~De~~~~~~~~--~~~~~--~~~-----~~~~i~~~s~sK 202 (335)
T 1uu1_A 138 --EGDVVFIPNPNNPTGHVFEREEIERILKTG---A-FVALDEAYYEFHGE--SYVDF--LKK-----YENLAVIRTFSK 202 (335)
T ss_dssp --TTEEEEEESSCTTTCCCCCHHHHHHHHHTT---C-EEEEECTTHHHHCC--CCGGG--GGT-----CSSEEEEEESTT
T ss_pred --CCCEEEEeCCCCCCCCCCCHHHHHHHHHhC---C-EEEEECcchhhcch--hHHHH--hhh-----CCCEEEEecchh
Confidence 678999999999999999988888888777 7 89999999976542 11221 111 578899999999
Q ss_pred cCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc
Q 019899 175 DLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCS 254 (334)
Q Consensus 175 ~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 254 (334)
.+|++|+|+||+++ ++++++.++.....++.|++.+.++..+++.. +++.+.+++++++++++.+.|++.|+++.
T Consensus 203 ~~g~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 277 (335)
T 1uu1_A 203 AFSLAAQRVGYVVA-SEKFIDAYNRVRLPFNVSYVSQMFAKVALDHR----EIFEERTKFIVEERERMKSALREMGYRIT 277 (335)
T ss_dssp TTTCGGGCCEEEEE-CHHHHHHHHHHSCTTCSCHHHHHHHHHHHHTH----HHHHHHHHHHHHHHHHHHHHHHHHTCCBC
T ss_pred hcCCcccCeEEEEe-CHHHHHHHHHhcCCCCcCHHHHHHHHHHhCCH----HHHHHHHHHHHHHHHHHHHHHHHCCcEEc
Confidence 99999999999999 89999999887777889999999999998763 34566778888999999999988787764
Q ss_pred CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHHHHHHHH
Q 019899 255 ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKV 329 (334)
Q Consensus 255 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l~~l~~~ 329 (334)
+.+++++|++++. .+..++...|+ ++||.+.| .++++|++++ +++++++++++|+++
T Consensus 278 -~~~~~~~~~~~~~-------~~~~~~~~~l~-~~gi~v~~-------~~~~iRis~~--~~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 278 -DSRGNFVFVFMEK-------EEKERLLEHLR-TKNVAVRS-------FREGVRITIG--KREENDMILRELEVF 334 (335)
T ss_dssp -CCCSSEEEEECCT-------HHHHHHHHHHH-HHTEEEEE-------ETTEEEEECC--CHHHHHHHHHHHHCC
T ss_pred -CCCCeEEEEECCC-------CCHHHHHHHHH-HCCEEEEE-------CCCeEEEEeC--CHHHHHHHHHHHHhh
Confidence 4456788998874 13457888865 47999988 1468999997 567899999988754
No 80
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=4.2e-35 Score=263.18 Aligned_cols=292 Identities=15% Similarity=0.137 Sum_probs=229.8
Q ss_pred hhhhhhhhcCCCCCC-CCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCC--hhhhhhhccCcEEEEEeCCCCCCcc
Q 019899 2 AGFMSQVLGQAVSFD-PSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPG--FDRDIRFRTGVELIPVHCRSTDNFA 78 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~-~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~--~~~~~~~~~g~~v~~v~~~~~~~~~ 78 (334)
++++.+.++ ++ ++++++|+|+++++..++.+++++||+|+++.|+|++ +...++ ..|.+++.++.+ .++.
T Consensus 59 ~~~la~~~g----~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~-~~g~~~~~v~~~--~~~~ 131 (386)
T 2dr1_A 59 VERLREFLE----VEKGEVLLVPSSGTGIMEASIRNGVSKGGKVLVTIIGAFGKRYKEVVE-SNGRKAVVLEYE--PGKA 131 (386)
T ss_dssp HHHHHHHHT----CSSSEEEEESSCHHHHHHHHHHHHSCTTCEEEEEESSHHHHHHHHHHH-HTTCEEEEEECC--TTCC
T ss_pred HHHHHHHhC----CCCCcEEEEeCChHHHHHHHHHHhhcCCCeEEEEcCCchhHHHHHHHH-HhCCceEEEecC--CCCC
Confidence 345555544 34 6789999999999999999999999999999999998 777777 889999999984 4567
Q ss_pred ccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhc
Q 019899 79 FSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEA 158 (334)
Q Consensus 79 ~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~ 158 (334)
+|+++|++++++ ..++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+.+.+. .+ +..
T Consensus 132 ~d~~~l~~~l~~----~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~----~~---~~~- 196 (386)
T 2dr1_A 132 VKPEDLDDALRK----NPDVEAVTITYNETSTGVLNP---LPELAKVAKEHDKLVFVDAVSAMGGAD----IK---FDK- 196 (386)
T ss_dssp CCHHHHHHHHHH----CTTCCEEEEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTBTTBC----CC---TTT-
T ss_pred CCHHHHHHHHhc----CCCCcEEEEEeecCCcchhCC---HHHHHHHHHHcCCeEEEEccccccCcc----cc---ccc-
Confidence 999999999964 137899999999999999999 899999999999999999999875431 11 111
Q ss_pred cccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHH----------------Hh----hcccCCChHHHHHHHHhh
Q 019899 159 EEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAK----------------KL----TRFCSISAPTQRLLISML 218 (334)
Q Consensus 159 ~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~----------------~~----~~~~~~~~~~~~~~~~~l 218 (334)
.+.++++.|+||+++.+ .++||+++ ++++.+.++ .. ...++.+...+.++..++
T Consensus 197 ----~~~di~~~s~sK~~~~~-~g~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l 270 (386)
T 2dr1_A 197 ----WGLDVVFSSSQKAFGVP-PGLAIGAF-SERFLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVAL 270 (386)
T ss_dssp ----TTCSEEEEETTSTTCCC-SSCEEEEE-CHHHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHH
T ss_pred ----cCCcEEEEeccccccCC-CceEEEEE-CHHHHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Confidence 46688999999999855 24899998 777777652 11 223466777888777776
Q ss_pred CChHHHHH--HHHHHHHHHHHHHHHHHHHHHhCCCcccCCC---ceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEE
Q 019899 219 SDTKFIQE--YLETNKRRIKKLYDSFVAGLKQLGIRCSESS---AGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINV 293 (334)
Q Consensus 219 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v 293 (334)
+.. .+ .+.+.+++++++++++.+.|++.|+++..+. .+.++|++++... +..++...|++ +||.+
T Consensus 271 ~~~---~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~-~gi~v 340 (386)
T 2dr1_A 271 RII---EKMGGKEKWLEMYEKRAKMVREGVREIGLDILAEPGHESPTITAVLTPPGI------KGDEVYEAMRK-RGFEL 340 (386)
T ss_dssp HHH---HHTTCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCTTCBCSSEEEEECCTTC------CHHHHHHHHHH-TTEEC
T ss_pred HHH---HHhcCHHHHHHHHHHHHHHHHHHHHHcCCeeCcCccccCCceEEEEcCCCC------CHHHHHHHHHH-CCeEE
Confidence 532 22 2567788899999999999998888877664 3667888887422 34678888666 59999
Q ss_pred cCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 294 TPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 294 ~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
.||..+. .++++|++++. .+++++++++++|++++++.
T Consensus 341 ~~~~~~~--~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 379 (386)
T 2dr1_A 341 AKGYGSV--KEKTFRIGHMGYMKFEDIQEMLDNLREVINEL 379 (386)
T ss_dssp EECCGGG--TTTEEEEECCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred ecCcccc--CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHc
Confidence 9988653 35799999986 69999999999999998763
No 81
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=100.00 E-value=2.3e-35 Score=265.67 Aligned_cols=289 Identities=15% Similarity=0.111 Sum_probs=226.9
Q ss_pred hhhhhhhcCCCCCCCC-cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCC--hhhhhhhccCcEEEEEeCCCCCCccc
Q 019899 3 GFMSQVLGQAVSFDPS-QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPG--FDRDIRFRTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 3 ~~~~~~~~~~~~~~~~-~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~--~~~~~~~~~g~~v~~v~~~~~~~~~~ 79 (334)
+++.+.+ +++++ ++++|+|+++++..++.+++++||+|++++|+|++ +...++ ..|.+++.++++ .++.+
T Consensus 74 ~~la~~~----g~~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-~~g~~~~~v~~~--~~~~~ 146 (393)
T 1vjo_A 74 SLLRYVW----QTENPLTIAVSGTGTAAMEATIANAVEPGDVVLIGVAGYFGNRLVDMAG-RYGADVRTISKP--WGEVF 146 (393)
T ss_dssp HHHHHHH----TCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHH-HTTCEEEEEECC--TTCCC
T ss_pred HHHHHHh----CCCCCcEEEEeCchHHHHHHHHHhccCCCCEEEEEcCChhHHHHHHHHH-HcCCceEEEecC--CCCCC
Confidence 4455444 45677 89999999999999999999999999999999998 888877 889999999984 35679
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
|+++|++++++. +++++++++|+||||.+.+ +++|.++|+++|+++|+|++|+.. .....+ ..
T Consensus 147 d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~g----~~~~~~---~~-- 209 (393)
T 1vjo_A 147 SLEELRTALETH-----RPAILALVHAETSTGARQP---LEGVGELCREFGTLLLVDTVTSLG----GVPIFL---DA-- 209 (393)
T ss_dssp CHHHHHHHHHHH-----CCSEEEEESEETTTTEECC---CTTHHHHHHHHTCEEEEECTTTTT----TSCCCT---TT--
T ss_pred CHHHHHHHHhhC-----CceEEEEeccCCCcceecc---HHHHHHHHHHcCCEEEEECCcccc----CcCCcc---cc--
Confidence 999999999864 6889999999999999999 889999999999999999999831 111121 11
Q ss_pred ccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh---------------------hccc-CCChHHHHHHHHh
Q 019899 160 EVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL---------------------TRFC-SISAPTQRLLISM 217 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~---------------------~~~~-~~~~~~~~~~~~~ 217 (334)
.+.++++.|+||+++.++ |+||+++ ++++.+.++.. ...+ +.+.+.+.++..+
T Consensus 210 ---~~~di~~~s~sK~l~~~~-~~G~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~a 284 (393)
T 1vjo_A 210 ---WGVDLAYSCSQKGLGCSP-GASPFTM-SSRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREA 284 (393)
T ss_dssp ---TTCSEEECCSSSTTCSCS-SCEEEEE-CHHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHH
T ss_pred ---cCccEEEEcCcccccCCC-ceEEEEE-CHHHHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHH
Confidence 466788999999998676 9999999 78888777532 1122 5677888888877
Q ss_pred hCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc---eeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEc
Q 019899 218 LSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSA---GLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVT 294 (334)
Q Consensus 218 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~ 294 (334)
++... +.++.+.+++++++++++.+.|++.|+++..+.+ +.++++.+|... +..++...|++++||.+.
T Consensus 285 l~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~gi~v~ 356 (393)
T 1vjo_A 285 LRLIA--QEGLANCWQRHQKNVEYLWERLEDIGLSLHVEKEYRLPTLTTVCIPDGV------DGKAVARRLLNEHNIEVG 356 (393)
T ss_dssp HHHHH--HHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCTTC------CHHHHHHHHHHHHCEECE
T ss_pred HHHHH--HccHHHHHHHHHHHHHHHHHHHHHcCCcccCCccccCCcEEEEEcCCCC------CHHHHHHHHHhhCCEEEe
Confidence 75421 3346778889999999999999988888776654 345667776422 346788886665599999
Q ss_pred CCCCcCCCCCCeEEEEe-cC-CCcccHHHHHHHHHHHH
Q 019899 295 PGSACHCIEPGWFRCCF-TS-LTHEDIPLVIERIQKVA 330 (334)
Q Consensus 295 ~g~~~~~~~~~~iRi~~-~~-~~~~~l~~~l~~l~~~~ 330 (334)
||..+. .++++|+++ +. .+++++++++++|++++
T Consensus 357 ~g~~~~--~~~~iRis~~~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 357 GGLGEL--AGKVWRVGLMGFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp ECCGGG--TTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred cCcccc--CCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence 998764 368999995 33 46668999999999876
No 82
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=100.00 E-value=4.8e-37 Score=279.08 Aligned_cols=283 Identities=16% Similarity=0.181 Sum_probs=224.7
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHh--------cCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCC
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCL--------ADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRS 73 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l--------~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~ 73 (334)
|+|+.++.+ ..+++++|++|+|+++++.+++.++ +++||+|+++.|+|+.+...++ ..|.+++.+
T Consensus 110 a~~~~~~~~--~~~~~~~iv~t~G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~-~~g~~~~~~---- 182 (427)
T 2hox_A 110 KELHEVVGN--AAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTK-YFDKKGYVW---- 182 (427)
T ss_dssp HHHHHHHTC--BCCTTCEEEEESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHH-HSCBTTEEE----
T ss_pred HHHHHHhCC--cCCCCCEEEEeCCHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHH-HcCCeeeee----
Confidence 455554322 4468899999999999999999999 8999999999999999999998 888876643
Q ss_pred CCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhh
Q 019899 74 TDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMA 153 (334)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~ 153 (334)
.+|++.|++++++ +++++++++|+||||.+++ +.+ + ++..+.|++|.. ...++.
T Consensus 183 ----~~d~~~l~~~~~~------~~k~v~l~~p~NPtG~~~~-~~l-------~--~~~~i~d~~~~~------~~~s~~ 236 (427)
T 2hox_A 183 ----AGNAANYVNVSNP------EQYIEMVTSPNNPEGLLRH-AVI-------K--GCKSIYDMVYYW------PHYTPI 236 (427)
T ss_dssp ----EEEGGGGTTCSCG------GGEEEEEESSCTTTCCCCC-CSS-------T--TCEEEEECTTCS------TTTSCC
T ss_pred ----cCCHHHHHHhhcC------CceEEEEcCCCCCcccccH-HHH-------c--CCCEEEeecccC------CCCCcc
Confidence 4578888887765 7899999999999999999 422 2 556777776632 122222
Q ss_pred hhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc--cCCChHHHHHHHHhhCCh-HHH------
Q 019899 154 EILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--CSISAPTQRLLISMLSDT-KFI------ 224 (334)
Q Consensus 154 ~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~-~~~------ 224 (334)
.+ ..++++++.||||.+|++|+|+||++++++++++.+++.... ++++++.|.++..++... +++
T Consensus 237 ~~------~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~ 310 (427)
T 2hox_A 237 KY------KADEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGT 310 (427)
T ss_dssp CS------CBCCSEEEEEHHHHTSCGGGCCEEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred cc------CCCceEEEEeChhcCCCCCceEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccch
Confidence 22 157889999999999999999999999668999999876554 568889999888888653 222
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHhC-CCcc--------------cCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHh
Q 019899 225 -QEYLETNKRRIKKLYDSFVAGLKQL-GIRC--------------SESSAGLYCWADMSGLIPSYSEKGELELWDKLLNI 288 (334)
Q Consensus 225 -~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~--------------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 288 (334)
++++.+.+++++++++++.+.|++. |+.+ ..|.+++|+|++++. +..+++..++++
T Consensus 311 ~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~--------~~~~~~~~ll~~ 382 (427)
T 2hox_A 311 MRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEW--------EEDKDCYQTFQN 382 (427)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECS--------GGGCSHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCcCccccccccccccccccccCCCCceEEEEECCC--------cHHHHHHHHHHH
Confidence 3566778889999999999999987 6554 245679999999975 124677887878
Q ss_pred cCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHHHHHHHHHHHc
Q 019899 289 AKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 289 ~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
+||.+.||..|+. .++++|+|++ .+++++++++++|++++++.
T Consensus 383 ~gI~v~pg~~f~~-~~~~~Ris~~-~~~e~l~~~l~~l~~~~~~~ 425 (427)
T 2hox_A 383 GRINTQNGVGFEA-SSRYVRLSLI-KTQDDFDQLMYYLKDMVKAK 425 (427)
T ss_dssp TTEECEEGGGGTS-CTTEEEEECS-SCHHHHHHHHHHHHHHHTCC
T ss_pred CCEEEcCCCccCC-CCCEEEEEec-CCHHHHHHHHHHHHHHHhhc
Confidence 9999999999976 5789999999 58889999999999998654
No 83
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=100.00 E-value=1.9e-34 Score=260.17 Aligned_cols=282 Identities=17% Similarity=0.122 Sum_probs=222.3
Q ss_pred CcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 18 SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
+++++|+|+++++..++.+++++||.|+++.|+|+++...++ ..|.+++.++. +|++++++++++... ++
T Consensus 104 ~~v~~~~ggt~a~~~~~~~~~~~gd~V~~~~p~~~~~~~~~~-~~g~~~~~v~~-------~d~~~l~~~l~~~~~--~~ 173 (398)
T 3a2b_A 104 EAAILFSTGFQSNLGPLSCLMGRNDYILLDERDHASIIDGSR-LSFSKVIKYGH-------NNMEDLRAKLSRLPE--DS 173 (398)
T ss_dssp SEEEEESSHHHHHHHHHHHSSCTTCEEEEETTCCHHHHHHHH-HSSSEEEEECT-------TCHHHHHHHHHTSCS--SS
T ss_pred CcEEEECCHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHH-HcCCceEEeCC-------CCHHHHHHHHHhhcc--CC
Confidence 689999999999999999999999999999999999999998 89999999985 578999998875210 16
Q ss_pred eeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCc-EEEEecccccC
Q 019899 98 VRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDR-VHIIYGLSKDL 176 (334)
Q Consensus 98 ~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~sK~~ 176 (334)
+++|++++|+||||.+.+ +++|.++|+++|+++|+||+|+.+.++.. ..++....+ . .++ +++++|+||.+
T Consensus 174 ~~~v~~~~~~nptG~~~~---~~~l~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~---~-~~~~di~~~s~sK~~ 245 (398)
T 3a2b_A 174 AKLICTDGIFSMEGDIVN---LPELTSIANEFDAAVMVDDAHSLGVIGHK-GAGTASHFG---L-NDDVDLIMGTFSKSL 245 (398)
T ss_dssp CEEEEEESBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGG-GCCHHHHHT---C-GGGCSEEEEESSSTT
T ss_pred ceEEEEeCCCCCCCCccC---HHHHHHHHHHcCcEEEEECCCcccccCCC-CCchHhhcC---C-CcCCeEEEecccccc
Confidence 889999999999999999 99999999999999999999998766321 122222211 1 234 68999999999
Q ss_pred CCCCceEEEEeecCHHHHHHHHHh-hc--ccCCChHHHH-HHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Q 019899 177 SLPGFRTGVIYSYNESVLAAAKKL-TR--FCSISAPTQR-LLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIR 252 (334)
Q Consensus 177 ~~~g~r~g~i~~~~~~~~~~~~~~-~~--~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 252 (334)
+++| ||+++ ++++++.+... .. ..+.+++.+. ++..+++.. ++..+.+++++++++++.+.|++.|++
T Consensus 246 ~~~G---G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~~----~~~~~~~~~~~~~~~~l~~~L~~~g~~ 317 (398)
T 3a2b_A 246 ASLG---GFVAG-DADVIDFLKHNARSVMFSASMTPASVASTLKALEII----QNEPEHIEKLWKNTDYAKAQLLDHGFD 317 (398)
T ss_dssp CSSC---EEEEE-CHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHH----HHCTHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCC---cEEEe-CHHHHHHHHHhcccceecCCCCHHHHHHHHHHHHHH----hhCHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9767 99998 78888888764 22 2234455555 344555432 234677888999999999999988888
Q ss_pred ccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC-CCCeEEEEecC-CCcccHHHHHHHHHHHH
Q 019899 253 CSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI-EPGWFRCCFTS-LTHEDIPLVIERIQKVA 330 (334)
Q Consensus 253 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~-~~~~iRi~~~~-~~~~~l~~~l~~l~~~~ 330 (334)
+..+. |+++|+.++.. .+..++...|++ +||.+.||..|+.. .++++|++++. .+++++++++++|++++
T Consensus 318 ~~~~~-g~~~~~~~~~~------~~~~~l~~~l~~-~gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l 389 (398)
T 3a2b_A 318 LGATE-SPILPIFIRSN------EKTFWVTKMLQD-DGVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVF 389 (398)
T ss_dssp BCSCC-SSEEEEECCCH------HHHHHHHHHHHH-TTEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred cCCCC-CCEEEEEcCCH------HHHHHHHHHHHH-CCcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 77665 67888988642 245678888666 59999999887532 35789999996 59999999999999998
Q ss_pred HHc
Q 019899 331 ETC 333 (334)
Q Consensus 331 ~~~ 333 (334)
+++
T Consensus 390 ~~~ 392 (398)
T 3a2b_A 390 KQA 392 (398)
T ss_dssp HHC
T ss_pred HHh
Confidence 865
No 84
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=100.00 E-value=2.1e-35 Score=265.74 Aligned_cols=284 Identities=18% Similarity=0.200 Sum_probs=217.9
Q ss_pred EEEecCcHHHHHHHHHHh----cCCCCeEEecCCCCCChhhhhhhccCcE-EEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 20 IVLTAGATPAVEILCFCL----ADHGNALLVPSPYYPGFDRDIRFRTGVE-LIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 20 i~~~~g~~~~~~~~~~~l----~~~gd~vl~~~p~~~~~~~~~~~~~g~~-v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
.+-|.|+|.|+...+..+ .++||+|++++|+|++|...++ ..|.+ +..++..+++.+.+|.+.+.+.++..
T Consensus 112 ~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~-~aG~~~V~~~~~~~~~~~~~d~~~~~~~l~~~--- 187 (420)
T 4h51_A 112 AVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVK-AAGWKNICTYAYYDPKTVSLNFEGMKKDILAA--- 187 (420)
T ss_dssp EEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHH-HTTCCCEEEEECEEGGGTEECHHHHHHHHHHS---
T ss_pred eeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHH-HcCCeEEEeeccccccccCCCHHHHHHHHhcc---
Confidence 445788888887666554 4799999999999999999999 88876 55666655677788999998888653
Q ss_pred CCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcc--hhhhhhhccccCCCcEEEEecc
Q 019899 95 GVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFV--SMAEILEAEEVDKDRVHIIYGL 172 (334)
Q Consensus 95 ~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~ 172 (334)
..+++++++++|+||||.+++.+++++|+++|+++++++++|++|++|.+++.... ....... ...+++++.||
T Consensus 188 ~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~s~ 263 (420)
T 4h51_A 188 PDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFAR----RGIEVLLAQSF 263 (420)
T ss_dssp CSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHH----TTCCCEEEEEC
T ss_pred CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHh----hCceEEEEecc
Confidence 34667788888999999999999999999999999999999999999988643221 1222222 15778999999
Q ss_pred cccCCCCCceEEEEeecCHHH--HH----HHHHh--hcccCCChHHHHHHHHhhCChHHH---HHHHHHHHHHHHHHHHH
Q 019899 173 SKDLSLPGFRTGVIYSYNESV--LA----AAKKL--TRFCSISAPTQRLLISMLSDTKFI---QEYLETNKRRIKKLYDS 241 (334)
Q Consensus 173 sK~~~~~g~r~g~i~~~~~~~--~~----~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~ 241 (334)
||.++++|+|+||++++.+.. .. .+... ....+.+...+.++..++.+.... ++.+..++++++++++.
T Consensus 264 SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~ 343 (420)
T 4h51_A 264 SKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAELSAMAERIRTMRRT 343 (420)
T ss_dssp TTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998743321 12 22221 233466778888888888775432 44567889999999999
Q ss_pred HHHHHHhCC----CcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcc
Q 019899 242 FVAGLKQLG----IRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHE 317 (334)
Q Consensus 242 ~~~~l~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~ 317 (334)
+.+.|++.| |....+.+|||.|..+++ +.++. |+++||.+.|+. |||++.++++
T Consensus 344 l~~~L~~~g~~~~~~~i~~q~GmF~~~gls~-----------e~v~~-L~e~~Vy~~~~g----------Ris~Agl~~~ 401 (420)
T 4h51_A 344 VYDELLRLQTPGSWEHVINQIGMFSFLGLSK-----------AQCEY-CQNHNIFITVSG----------RANMAGLTHE 401 (420)
T ss_dssp HHHHHHHTTCSSCCTHHHHCCSSEEECCCCH-----------HHHHH-HHHTTEECCTTC----------EEEGGGCCHH
T ss_pred HHHHHHHhCCCCCCCeecCCCceEEecCcCH-----------HHHHH-HHhCCEEEcCCC----------EEEeccCCHH
Confidence 999999875 444567789999876542 44444 678999988753 9999888999
Q ss_pred cHHHHHHHHHHHHHHc
Q 019899 318 DIPLVIERIQKVAETC 333 (334)
Q Consensus 318 ~l~~~l~~l~~~~~~~ 333 (334)
+++++.++|.+++++.
T Consensus 402 ni~~~a~aI~~vvr~i 417 (420)
T 4h51_A 402 TALMLAQTINDAVRNV 417 (420)
T ss_dssp HHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998763
No 85
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=100.00 E-value=9e-34 Score=256.68 Aligned_cols=285 Identities=13% Similarity=0.062 Sum_probs=222.3
Q ss_pred CCCCCCc-EEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCC--hhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHH
Q 019899 13 VSFDPSQ-IVLTAGATPAVEILCFCLADHGNALLVPSPYYPG--FDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFN 89 (334)
Q Consensus 13 ~~~~~~~-i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~--~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~ 89 (334)
++.+.++ +++++|+++++..++.+++++||+|+++.|+|++ +...++ ..|.+++.+++ +.++.+|+++++++++
T Consensus 59 ~~~~~~~~v~~~~sgt~al~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-~~g~~~~~v~~--~~~~~~d~~~l~~~i~ 135 (411)
T 3nnk_A 59 FRTENRWTMLVDGTSRAGIEAILVSAIRPGDKVLVPVFGRFGHLLCEIAR-RCRAEVHTIEV--PWGEVFTPDQVEDAVK 135 (411)
T ss_dssp HTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHH-HTTCEEEEEEC--CTTCCCCHHHHHHHHH
T ss_pred hCCCCCcEEEECCCcHHHHHHHHHHhcCCCCEEEEecCCchHHHHHHHHH-HcCCeEEEEec--CCCCCCCHHHHHHHHh
Confidence 3455565 7888899999999999999999999999999987 777777 88999999998 4556789999999998
Q ss_pred HHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEE
Q 019899 90 QARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHII 169 (334)
Q Consensus 90 ~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (334)
+. ++++|++++|+||||.+.| +++|.++|++||+++|+|++++.... ..... ..+.++++
T Consensus 136 ~~-----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~----~~~~~--------~~~~d~~~ 195 (411)
T 3nnk_A 136 RI-----RPRLLLTVQGDTSTTMLQP---LAELGEICRRYDALFYTDATASLGGN----PLETD--------VWGLDAVS 195 (411)
T ss_dssp HH-----CCSEEEEESEETTTTEECC---CTTHHHHHHHHTCEEEEECTTTBTTB----CCCTT--------TTTCSEEE
T ss_pred hC-----CCeEEEEeCCCCCcceecc---HHHHHHHHHHcCCEEEEECCcccCCc----ccchh--------ccCCcEEE
Confidence 64 7899999999999999999 88999999999999999999865221 11111 14567889
Q ss_pred ecccccCCCCCceEEEEeecCHHHHHHHHHhh--------------------------------------cccCCChHHH
Q 019899 170 YGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT--------------------------------------RFCSISAPTQ 211 (334)
Q Consensus 170 ~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~~ 211 (334)
.|++|+++ .+.++|++++ ++++.+.++... ..++.+...+
T Consensus 196 ~s~~K~l~-~~~g~g~~~~-~~~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (411)
T 3nnk_A 196 AGMQKCLG-GPSGTSPITL-SARMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTAL 273 (411)
T ss_dssp CCSTTTTC-CCSSEEEEEE-CHHHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHH
T ss_pred ecCccccC-CCCceEEEEE-CHHHHHHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHH
Confidence 99999864 3446899998 888888887543 1134455666
Q ss_pred HHHHHhhCChHHHHHH-HHHHHHHHHHHHHHHHHHHHhCCCcccCCCc---eeEEeeecCCcCCCCChhhHHHHHHHHHH
Q 019899 212 RLLISMLSDTKFIQEY-LETNKRRIKKLYDSFVAGLKQLGIRCSESSA---GLYCWADMSGLIPSYSEKGELELWDKLLN 287 (334)
Q Consensus 212 ~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 287 (334)
.++..++.. ..+. +.+..++++++++++.+.|++.|+++..+.+ +.++++.+|... +..++...|++
T Consensus 274 ~a~~~al~~---~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~l~~ 344 (411)
T 3nnk_A 274 FGARECARL---ILQEGLDYGIARHKLHGDALVKGIQAMGLETFGDLKHKMNNVLGVVIPQGI------NGDQARKLMLE 344 (411)
T ss_dssp HHHHHHHHH---HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBCSCGGGBCSSEEEEECCTTC------CHHHHHHHHHH
T ss_pred HHHHHHHHH---HHHhhHHHHHHHHHHHHHHHHHHHHHcCCEeCCCcccccccEEEEECCCCC------CHHHHHHHHHH
Confidence 666555543 2333 6778889999999999999998888776543 567788887532 34678888777
Q ss_pred hcCeEEcCCCCcCCCCCCeEEEEe-cC-CCcccHHHHHHHHHHHHHHc
Q 019899 288 IAKINVTPGSACHCIEPGWFRCCF-TS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 288 ~~gi~v~~g~~~~~~~~~~iRi~~-~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
++||.+.||.. ...++++|+++ +. .+++++++++++|++++++.
T Consensus 345 ~~gi~v~~g~~--~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~ 390 (411)
T 3nnk_A 345 DFGIEIGTSFG--PLHGKVWRIGTMGYNARKDCVMTTLSALEAVLNYL 390 (411)
T ss_dssp HHSEEEEECCG--GGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred hcCeEEeCccC--CCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHHc
Confidence 67999998853 23467999998 54 47999999999999998764
No 86
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=100.00 E-value=2.6e-33 Score=252.69 Aligned_cols=286 Identities=16% Similarity=0.125 Sum_probs=219.6
Q ss_pred cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCce
Q 019899 19 QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKV 98 (334)
Q Consensus 19 ~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 98 (334)
+.++++++++++..++.+++++||.|+++.|+|+++...++ ..|.+++.++. +|++++++++++....+.++
T Consensus 105 ~~i~~~sGt~a~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~-~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~ 176 (399)
T 3tqx_A 105 DTILYSSCFDANGGLFETLLGPEDAIISDELNHASIIDGIR-LCKAQRYRYKN-------NAMGDLEAKLKEADEKGARF 176 (399)
T ss_dssp EEEEESCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHH-SCCSEEEEECT-------TCTTHHHHHHHHHHTTTCSS
T ss_pred cEEEECchHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHH-HcCCceeEeCC-------CCHHHHHHHHHhhhccCCCc
Confidence 34444555889999999999999999999999999999998 89999999984 47889999998765544578
Q ss_pred eEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEecccccCCC
Q 019899 99 RGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSL 178 (334)
Q Consensus 99 ~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~ 178 (334)
++|++++|+||||.++| +++|.++|+++|+++|+||+|+...++... .+...... ...+.++++.|+||+++
T Consensus 177 ~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~-~~~~~~~~---~~~~~di~~~s~sK~~~- 248 (399)
T 3tqx_A 177 KLIATDGVFSMDGIIAD---LKSICDLADKYNALVMVDDSHAVGFIGENG-RGTPEYCG---VADRVDILTGTLGKALG- 248 (399)
T ss_dssp EEEEEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTS-CCHHHHHT---CTTCCSEEEEESSSSSC-
T ss_pred eEEEEeCCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCC-CchHHhhC---CCCCCcEEEecchHhcc-
Confidence 99999999999999999 999999999999999999999743333221 12222221 11356789999999997
Q ss_pred CCceEEEEeecCHHHHHHHHHhhcc----cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc
Q 019899 179 PGFRTGVIYSYNESVLAAAKKLTRF----CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCS 254 (334)
Q Consensus 179 ~g~r~g~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 254 (334)
|++.||+++ ++++++.+...... .+.++..+.++...++.. .++..+.+++++++++++.+.|++.|+++.
T Consensus 249 -g~~gG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 323 (399)
T 3tqx_A 249 -GASGGYTSG-HKEIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELL---KTEGPQLRKQLQENSRYFRAGMEKLGFQLV 323 (399)
T ss_dssp -SSCCEEEEE-CHHHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHH---HHTHHHHHHHHHHHHHHHHHHHHHHTCCBC
T ss_pred -cCceEEEEc-CHHHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHH---hhccHHHHHHHHHHHHHHHHHHHHcCCCcC
Confidence 334499998 88888888765332 245556666665555432 244678888999999999999999898887
Q ss_pred CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcC-CCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 255 ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACH-CIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 255 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
.+. +.++|+.++.. .+..++...|++ +||.+.|+.+++ ...++++|++++. .+++++++++++|++++++
T Consensus 324 ~~~-~~~~~~~~~~~------~~~~~~~~~l~~-~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 395 (399)
T 3tqx_A 324 PGN-HPIIPVMLGDA------QLATNMADHLLQ-EGIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKK 395 (399)
T ss_dssp CCS-SSEEEEEEECH------HHHHHHHHHHHH-TTEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCC-CCEEEEEeCCH------HHHHHHHHHHHH-CCCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHHHHH
Confidence 554 45577787653 245678888666 799999876543 2235799999984 6999999999999999987
Q ss_pred c
Q 019899 333 C 333 (334)
Q Consensus 333 ~ 333 (334)
.
T Consensus 396 ~ 396 (399)
T 3tqx_A 396 L 396 (399)
T ss_dssp T
T ss_pred h
Confidence 5
No 87
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=100.00 E-value=1.1e-33 Score=253.67 Aligned_cols=283 Identities=14% Similarity=0.160 Sum_probs=218.1
Q ss_pred CCCCCC--CcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCC--hhhhhhhccCcEEEEEeCCCCCCccccHHHHHHH
Q 019899 12 AVSFDP--SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPG--FDRDIRFRTGVELIPVHCRSTDNFAFSITALDQA 87 (334)
Q Consensus 12 ~~~~~~--~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~--~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~ 87 (334)
.+++++ +++++|+|+++++. ++..++++||+|++++|+|++ +...++ ..|.+++.++++ .++.+|+++++++
T Consensus 47 ~~~~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~vi~~~~~~~~~~~~~~~~-~~g~~~~~v~~~--~~~~~d~~~l~~~ 122 (384)
T 3zrp_A 47 VMGASKNYQPLIIPGGGTSAME-SVTSLLKPNDKILVVSNGVFGDRWEQIFK-RYPVNVKVLRPS--PGDYVKPGEVEEE 122 (384)
T ss_dssp HHTCCTTSEEEEEESCHHHHHH-HGGGGCCTTCEEEEECSSHHHHHHHHHHT-TSSCEEEEECCS--TTCCCCHHHHHHH
T ss_pred HhCCCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEEEEecCCcchHHHHHHHH-HcCCcEEEecCC--CCCCCCHHHHHHH
Confidence 344555 88999999999999 999999999999999999965 445556 789999999984 3557999999999
Q ss_pred HHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEE
Q 019899 88 FNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVH 167 (334)
Q Consensus 88 l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (334)
+++. ++++|++++|+||||.+.| +++|.++|++||+++|+|++|+.... ..+.. . .+.++
T Consensus 123 i~~~-----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~----~~~~~---~-----~~~d~ 182 (384)
T 3zrp_A 123 VRKS-----EYKLVALTHVETSTGVREP---VKDVINKIRKYVELIVVDGVSSVGAE----EVKAE---E-----WNVDV 182 (384)
T ss_dssp HHHS-----CEEEEEEESEETTTTEECC---HHHHHHHHGGGEEEEEEECTTTTTTS----CCCTT---T-----TTCSE
T ss_pred HHhC-----CCcEEEEeCCCCCCceECc---HHHHHHHHHhcCCEEEEECcccccCc----ccccc---c-----cCCCE
Confidence 9873 6899999999999999999 88999999999999999999875322 11111 1 45678
Q ss_pred EEecccccCCCCCceEEEEeecCHHHHHHH-------------HHhh-----------ccc-CCChHHHHHHHHhhCChH
Q 019899 168 IIYGLSKDLSLPGFRTGVIYSYNESVLAAA-------------KKLT-----------RFC-SISAPTQRLLISMLSDTK 222 (334)
Q Consensus 168 ~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~-------------~~~~-----------~~~-~~~~~~~~~~~~~l~~~~ 222 (334)
++.|+||+++ .+.++|++++ ++++.+.+ .... ..+ +.+...+.++..++...+
T Consensus 183 ~~~s~~K~~~-~~~g~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~ 260 (384)
T 3zrp_A 183 YLTASQKALG-SAAGLGLLLL-SPKALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIE 260 (384)
T ss_dssp EEEETTSTTC-CCSSEEEEEE-CHHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHH
T ss_pred EEecCccccc-CCCceEEEEE-CHHHHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHH
Confidence 8999999985 3345899998 77776666 2111 112 445556666655554321
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC----ceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCC
Q 019899 223 FIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESS----AGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSA 298 (334)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~ 298 (334)
+..+.+++++++++++++.+.|++.|+++..+. .+.++|+.++. . +..++.+.|.+ +||.+.+|..
T Consensus 261 --~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~l~~-~gi~v~~g~~ 330 (384)
T 3zrp_A 261 --KEGIENRIKRHTMVASAIRAGLEALGLEIVARRPESYSNTVTGVILKV-A------DPQKVLAGTVN-EGVEFAPGVH 330 (384)
T ss_dssp --HHCHHHHHHHHHHHHHHHHHHHHHTTCCBSCSSGGGBCSSEEEEECSS-S------CHHHHHHHHHT-TTCCCEECCC
T ss_pred --hcCHHHHHHHHHHHHHHHHHHHHHCCCeEccCcccccCccEEEEECCC-C------CHHHHHHHHHH-CCEEEecCCC
Confidence 223577888899999999999999888877665 46777888876 2 34678888555 6999998875
Q ss_pred cCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 299 CHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 299 ~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
+.. +++|++++. .+++++++++++|++++++.
T Consensus 331 ~~~---~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~ 363 (384)
T 3zrp_A 331 PAF---KYFRIGHMGWVTPNDAIIAISVIERTLRKL 363 (384)
T ss_dssp TTC---CEEEEECCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCc---CEEEEeccccCCHHHHHHHHHHHHHHHHHc
Confidence 432 899999875 68999999999999998764
No 88
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=100.00 E-value=9.3e-34 Score=255.42 Aligned_cols=294 Identities=13% Similarity=0.104 Sum_probs=223.9
Q ss_pred hhhhhcCCCCCCCC-cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChh--hhhhhccCcEEEEEeCCCCCCccccH
Q 019899 5 MSQVLGQAVSFDPS-QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFD--RDIRFRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 5 ~~~~~~~~~~~~~~-~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~--~~~~~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
+++.+++.++.+++ +|++|+|+++++..++.+++++||+|+++.|+|+++. ..++ ..|.+++.++++ .++.+|+
T Consensus 56 l~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~-~~g~~~~~v~~~--~~~~~d~ 132 (396)
T 2ch1_A 56 VKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLLEEGDRVLIAVNGIWAERAVEMSE-RYGADVRTIEGP--PDRPFSL 132 (396)
T ss_dssp HHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHH-HTTCEEEEEECC--TTSCCCH
T ss_pred HHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHHhcCCCCeEEEEcCCcccHHHHHHHH-HcCCceEEecCC--CCCCCCH
Confidence 34444455566777 8999999999999999999999999999999999884 3556 789999999984 4567999
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
+++++++++. ++++|++++|+||||.++| +++|.++|+++|++||+|++|+.. ....++. .
T Consensus 133 ~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~li~Dea~~~g----~~~~~~~---~---- 193 (396)
T 2ch1_A 133 ETLARAIELH-----QPKCLFLTHGDSSSGLLQP---LEGVGQICHQHDCLLIVDAVASLC----GVPFYMD---K---- 193 (396)
T ss_dssp HHHHHHHHHH-----CCSEEEEESEETTTTEECC---CTTHHHHHHHTTCEEEEECTTTBT----TBCCCTT---T----
T ss_pred HHHHHHHHhC-----CCCEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEEcccccc----CCccchh---h----
Confidence 9999999864 6899999999999999999 889999999999999999999842 1111211 1
Q ss_pred CCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh-------------------------cccCCChHHHHHHHH
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT-------------------------RFCSISAPTQRLLIS 216 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~ 216 (334)
.+.++++.|++|+++ .+.++|++++ ++++++.+.... ..++.+...+.++..
T Consensus 194 -~~~d~~~~s~~K~~~-~~~g~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 270 (396)
T 2ch1_A 194 -WEIDAVYTGAQKVLG-APPGITPISI-SPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALRE 270 (396)
T ss_dssp -TTCCEEECCCC-CCC-CCSSCEEEEE-CHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHH
T ss_pred -cCcCEEEEcCCcccc-CCCCeEEEEE-CHHHHHhhhhccCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHH
Confidence 344567789999875 3345699998 777777765310 113456667777666
Q ss_pred hhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCce----eEEeeecCCcCCCCChhhHHHHHHHHHHhcCeE
Q 019899 217 MLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAG----LYCWADMSGLIPSYSEKGELELWDKLLNIAKIN 292 (334)
Q Consensus 217 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~ 292 (334)
++... .++.+.+.+++++++++++.+.|+++|+++..+.++ .++++.++... +..++.+.|++++||.
T Consensus 271 al~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~L~~~~gi~ 342 (396)
T 2ch1_A 271 ALAQI--AEEGLENQIKRRIECAQILYEGLGKMGLDIFVKDPRHRLPTVTGIMIPKGV------DWWKVSQYAMNNFSLE 342 (396)
T ss_dssp HHHHH--HHHCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTTEEEEECCTTC------CHHHHHHHHHHHHCBC
T ss_pred HHHHH--HHhhHHHHHHHHHHHHHHHHHHHHHCCCeeccCCccccCCceEEEEcCCCC------CHHHHHHHHHHhCCEE
Confidence 66432 134467788889999999999999888888776553 36777876422 3467888877767999
Q ss_pred EcCCCCcCCCCCCeEEEEe-cC-CCcccHHHHHHHHHHHHHHc
Q 019899 293 VTPGSACHCIEPGWFRCCF-TS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 293 v~~g~~~~~~~~~~iRi~~-~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
+.+|..+. .++++|+++ +. .+++++++++++|++++++.
T Consensus 343 v~~g~~~~--~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~~ 383 (396)
T 2ch1_A 343 VQGGLGPT--FGKAWRVGIMGECSTVQKIQFYLYGFKESLKAT 383 (396)
T ss_dssp CBCCCGGG--TTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHH
T ss_pred EecCcccc--CCCEEEEECCCCcCCHHHHHHHHHHHHHHHHHh
Confidence 99887543 368999999 43 58899999999999998764
No 89
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=100.00 E-value=1.9e-34 Score=258.73 Aligned_cols=291 Identities=17% Similarity=0.190 Sum_probs=218.8
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc----CCCCeEEecCCCCCChhhhh---hhccCcEEEEEeCCCCCCc
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLA----DHGNALLVPSPYYPGFDRDI---RFRTGVELIPVHCRSTDNF 77 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~----~~gd~vl~~~p~~~~~~~~~---~~~~g~~v~~v~~~~~~~~ 77 (334)
+++.+++.+++++++|++|+|+++++..++.++. ++||+|+++.|+|+++...+ + ..|.+++.++++ .++
T Consensus 49 l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~--~~~ 125 (384)
T 1eg5_A 49 AREKVAKVLGVSPSEIFFTSCATESINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLS-MKGFKVKYVPVD--SRG 125 (384)
T ss_dssp HHHHHHHHHTSCGGGEEEESCHHHHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHH-HTTCEEEECCBC--TTS
T ss_pred HHHHHHHHcCCCCCeEEEECCHHHHHHHHHHhhhhhccCCCCEEEECCCCchHHHHHHHHHH-hcCCEEEEEccC--CCC
Confidence 3444444455778899999999999999999997 79999999999999887766 5 679999999984 456
Q ss_pred cccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcC--cEEEEeccccccccCCCCcchhhhh
Q 019899 78 AFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKN--IHVISDEIYGGSIFGNEEFVSMAEI 155 (334)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~--~~vi~D~~~~~~~~~~~~~~~~~~~ 155 (334)
.+|+++|++++++ ++++|++++|+||||.++| +++|.++|+++| ++||+|++|+. +. ...++
T Consensus 126 ~~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~li~Dea~~~---~~-~~~~~--- 189 (384)
T 1eg5_A 126 VVKLEELEKLVDE------DTFLVSIMAANNEVGTIQP---VEDVTRIVKKKNKETLVHVDAVQTI---GK-IPFSL--- 189 (384)
T ss_dssp CBCHHHHHHHCCT------TEEEEEEESBCTTTCBBCC---HHHHHHHHHHHCTTCEEEEECTTTT---TT-SCCCC---
T ss_pred ccCHHHHHHHhCC------CCeEEEEECCCCCcccccC---HHHHHHHHHhcCCceEEEEEhhhhc---CC-cccCc---
Confidence 7999999999875 7899999999999999999 899999999999 99999999973 21 11121
Q ss_pred hhccccCCCcEEEEecccccCCCCCceEEEEeecCHHH--HHHHHHh-----hcccCCChHHHHHHHHhhCChHHHHHHH
Q 019899 156 LEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESV--LAAAKKL-----TRFCSISAPTQRLLISMLSDTKFIQEYL 228 (334)
Q Consensus 156 ~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~--~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 228 (334)
.. .+.++++.|+||.+|++| +||+++ ++++ ...+... ...++.+.+.+.++..+++.. .+++
T Consensus 190 ~~-----~~~di~~~s~sK~~g~~G--~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~---~~~~ 258 (384)
T 1eg5_A 190 EK-----LEVDYASFSAHKFHGPKG--VGITYI-RKGVPIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIA---VEEL 258 (384)
T ss_dssp TT-----TCCSEEEEEGGGGTSCTT--CEEEEE-CTTSCCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHH---HHTH
T ss_pred hh-----cCCCEEEecHHHhcCCCc--eEEEEE-cCCCccccccccCcccccccCCCCChHHHHHHHHHHHHH---HHhH
Confidence 11 356788999999998778 699998 4443 2222111 133567788888777777542 3456
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccCCCc---eeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC---
Q 019899 229 ETNKRRIKKLYDSFVAGLKQLGIRCSESSA---GLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI--- 302 (334)
Q Consensus 229 ~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~--- 302 (334)
.+.+++++++++++.+.|++.|+++..+.. +.++++.++.. +..++.+.| .++||.+.+|..|+..
T Consensus 259 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l-~~~gi~v~~g~~~~~~~~~ 330 (384)
T 1eg5_A 259 SEAAKHMEKLRSKLVSGLMNLGAHIITPLEISLPNTLSVSFPNI-------RGSTLQNLL-SGYGIYVSTSSACTSKDER 330 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEECSCTTSBCTTEEEEECTTC-------CHHHHHHHH-HHTTEECBC----------
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEeCCcccCCCCEEEEEeCCC-------CHHHHHHHH-hhCCeEEeccccccCCCCc
Confidence 778889999999999999888887765431 33566666532 345777774 5689999999877532
Q ss_pred --------------CCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 303 --------------EPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 303 --------------~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
.++++|++++. .+++++++++++|++++++.
T Consensus 331 ~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 376 (384)
T 1eg5_A 331 LRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSFL 376 (384)
T ss_dssp --CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred chHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 13689999985 69999999999999998865
No 90
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=100.00 E-value=3.6e-33 Score=252.10 Aligned_cols=293 Identities=15% Similarity=0.089 Sum_probs=223.7
Q ss_pred hhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHH
Q 019899 6 SQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALD 85 (334)
Q Consensus 6 ~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~ 85 (334)
++.+++.++++ +.+ +++++++++..++.+++++||.|+++.|+|+++...++ ..|.+++.++. .|+++++
T Consensus 96 ~~~la~~~g~~-~~i-~~~sGs~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~-~~g~~~~~~~~-------~d~~~l~ 165 (401)
T 1fc4_A 96 EQKLAAFLGME-DAI-LYSSCFDANGGLFETLLGAEDAIISDALNHASIIDGVR-LCKAKRYRYAN-------NDMQELE 165 (401)
T ss_dssp HHHHHHHHTCS-EEE-EESCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHH-TSCSEEEEECT-------TCHHHHH
T ss_pred HHHHHHHhCCC-cEE-EeCChHHHHHHHHHHHcCCCCEEEEcchhHHHHHHHHH-HcCCceEEECC-------CCHHHHH
Confidence 33344444444 445 45555779999999999999999999999998888888 89999998873 4789999
Q ss_pred HHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEecccc-cccc-CCCCcchhhhhhhccccCC
Q 019899 86 QAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYG-GSIF-GNEEFVSMAEILEAEEVDK 163 (334)
Q Consensus 86 ~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~-~~~~-~~~~~~~~~~~~~~~~~~~ 163 (334)
+++++....+.++++|++++|+||||.+++ +++|.++|+++|+++|+||+|+ ++.+ .+....+...+ ..
T Consensus 166 ~~l~~~~~~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~------~~ 236 (401)
T 1fc4_A 166 ARLKEAREAGARHVLIATDGVFSMDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDV------MG 236 (401)
T ss_dssp HHHHHHHHTTCSSEEEEEESEETTTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTC------TT
T ss_pred HHHHHhhccCCCceEEEEeCCcCCCCCCCC---HHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCC------Cc
Confidence 999865433336889999999999999999 9999999999999999999996 6653 33332222222 24
Q ss_pred CcEEEEecccccC-CCCCceEEEEeecCHHHHHHHHHhhc----ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 164 DRVHIIYGLSKDL-SLPGFRTGVIYSYNESVLAAAKKLTR----FCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 164 ~~~~~~~s~sK~~-~~~g~r~g~i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
+.++++.|+||.+ ++.| ||+++ ++++++.+..... .++.++..+.++...++.. ++ ..+.+++++++
T Consensus 237 ~~di~~~s~sK~~~~~~g---G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~-~~~~~~~~~~~ 308 (401)
T 1fc4_A 237 RVDIITGTLGKALGGASG---GYTAA-RKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMV---EA-GSELRDRLWAN 308 (401)
T ss_dssp CCSEEEEESSSTTCSSSC---EEEEE-CHHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHH---HT-CHHHHHHHHHH
T ss_pred CCcEEEecchhhccCCCC---EEEEc-CHHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHH---hc-CHHHHHHHHHH
Confidence 5678999999999 5444 99998 8898888876432 2367788888877776432 11 35677888899
Q ss_pred HHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC-CCCeEEEEecC-CCc
Q 019899 239 YDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI-EPGWFRCCFTS-LTH 316 (334)
Q Consensus 239 ~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~-~~~~iRi~~~~-~~~ 316 (334)
++++.+.|++.|+++. +..+.++|++++.. .+..++...|.+ +||.+.|+..|+.. .++++|++++. .++
T Consensus 309 ~~~l~~~L~~~g~~~~-~~~~~~~~~~~~~~------~~~~~l~~~l~~-~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~ 380 (401)
T 1fc4_A 309 ARQFREQMSAAGFTLA-GADHAIIPVMLGDA------VVAQKFARELQK-EGIYVTGFFYPVVPKGQARIRTQMSAAHTP 380 (401)
T ss_dssp HHHHHHHHHHTTCCBC-CSSSSEEEEEEECH------HHHHHHHHHHHH-TTEECCEECTTSSCTTCEEEEEECCTTCCH
T ss_pred HHHHHHHHHHcCCccc-CCCCCEEEEEcCCh------HHHHHHHHHHHH-CCcEEeeecCCCCCCCCceEEEEeCCCCCH
Confidence 9999999998888876 45677788888642 244678888555 69999998877543 24689999985 699
Q ss_pred ccHHHHHHHHHHHHHHc
Q 019899 317 EDIPLVIERIQKVAETC 333 (334)
Q Consensus 317 ~~l~~~l~~l~~~~~~~ 333 (334)
+++++++++|++++++.
T Consensus 381 ~~i~~~~~~l~~~~~~~ 397 (401)
T 1fc4_A 381 EQITRAVEAFTRIGKQL 397 (401)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999998865
No 91
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=100.00 E-value=6e-33 Score=251.66 Aligned_cols=292 Identities=16% Similarity=0.151 Sum_probs=223.7
Q ss_pred hhhhcCCCCCCCCcEE-EecCcHHHHHHHHHHhcCCCCeEEecCCCCCC--hhhhhhhccCcEEEEEeCCCCCCccccHH
Q 019899 6 SQVLGQAVSFDPSQIV-LTAGATPAVEILCFCLADHGNALLVPSPYYPG--FDRDIRFRTGVELIPVHCRSTDNFAFSIT 82 (334)
Q Consensus 6 ~~~~~~~~~~~~~~i~-~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~--~~~~~~~~~g~~v~~v~~~~~~~~~~~~~ 82 (334)
++.+++.+++++++++ +++|+++++..++.+++++||+|++++|+|++ +...++ ..|.+++.++++ .++.+|++
T Consensus 50 ~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~-~~g~~~~~v~~~--~~~~~d~~ 126 (416)
T 3isl_A 50 MEMLRELFQTKNRWAYPIDGTSRAGIEAVLASVIEPEDDVLIPIYGRFGYLLTEIAE-RYGANVHMLECE--WGTVFDPE 126 (416)
T ss_dssp HHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHH-HTTCEEEEEECC--TTCCCCHH
T ss_pred HHHHHHHhCCCCCcEEEecCcHHHHHHHHHHHhcCCCCEEEEecCCcccHHHHHHHH-hcCCeeEEEecC--CCCCCCHH
Confidence 3444444556777666 88889999999999999999999999999987 656677 789999999984 44578999
Q ss_pred HHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccC
Q 019899 83 ALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVD 162 (334)
Q Consensus 83 ~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (334)
++++++++. ++++|++++|+||||.+.| +++|.++|++||+++|+|++|+.... ..... .
T Consensus 127 ~l~~~i~~~-----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~----~~~~~---~----- 186 (416)
T 3isl_A 127 DIIREIKKV-----KPKIVAMVHGETSTGRIHP---LKAIGEACRTEDALFIVDAVATIGGC----EVKVD---E----- 186 (416)
T ss_dssp HHHHHHHHH-----CCSEEEEESEETTTTEECC---CHHHHHHHHHTTCEEEEECTTTTTTS----CCCTT---T-----
T ss_pred HHHHHHhhC-----CCcEEEEEccCCCCceecC---HHHHHHHHHHcCCEEEEECCccccCC----Ccchh---h-----
Confidence 999999843 7899999999999999999 88999999999999999999874221 11111 1
Q ss_pred CCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh----------------------------------------c
Q 019899 163 KDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT----------------------------------------R 202 (334)
Q Consensus 163 ~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~----------------------------------------~ 202 (334)
.+.++++.|++|+++ .+.++|++++ ++++.+.+.... .
T Consensus 187 ~~~d~~~~s~~K~l~-g~~g~g~~~~-~~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~ 264 (416)
T 3isl_A 187 WKIDAAIGGTQKCLS-VPSGMAPITY-NERVADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLN 264 (416)
T ss_dssp TTCSEEECCSSSTTC-CCSSEEEEEE-CHHHHHHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCC
T ss_pred cCCCEEEecCccccC-CCCCeEEEEE-CHHHHHHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCC
Confidence 456788999999864 3445899998 888887776321 1
Q ss_pred ccCCChHHHHHHHHhhCChHHHHHH-HHHHHHHHHHHHHHHHHHHHhCCCcccCCCc---eeEEeeecCCcCCCCChhhH
Q 019899 203 FCSISAPTQRLLISMLSDTKFIQEY-LETNKRRIKKLYDSFVAGLKQLGIRCSESSA---GLYCWADMSGLIPSYSEKGE 278 (334)
Q Consensus 203 ~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~ 278 (334)
.++.+...+.++..++.. ..++ +++.++++.++++++.+.|++.|+++..+.+ +.++++.+|... +.
T Consensus 265 ~~~~~~~~~~a~~~al~~---~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~ 335 (416)
T 3isl_A 265 HHTEATTMLYALREGVRL---VLEEGLETRFERHRHHEAALAAGIKAMGLRLFGDDSCKMPVVTCVEIPGGI------DG 335 (416)
T ss_dssp SSCCCHHHHHHHHHHHHH---HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBCSCGGGBCTTEEEEECCTTC------CH
T ss_pred CCCCCHHHHHHHHHHHHH---HHHhhHHHHHHHHHHHHHHHHHHHHHcCCEeccCccccCCcEEEEeCCCCC------CH
Confidence 224455666666665543 2333 6788889999999999999998888776654 566778886432 34
Q ss_pred HHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCccc-HHHHHHHHHHHHHHc
Q 019899 279 LELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHED-IPLVIERIQKVAETC 333 (334)
Q Consensus 279 ~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~-l~~~l~~l~~~~~~~ 333 (334)
.++.+.|++++||.+.+|... ..++++|++++. .++++ +++++++|+++++++
T Consensus 336 ~~l~~~L~~~~gi~v~~g~~~--~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~~ 390 (416)
T 3isl_A 336 ESVRDMLLAQFGIEIASSFGP--LAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLRH 390 (416)
T ss_dssp HHHHHHHHHHHCEECBCCCST--TTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCEEEecCCCC--CCCCEEEEecccCCCcHHHHHHHHHHHHHHHHHc
Confidence 688888777669999988742 346899999953 46666 999999999998865
No 92
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=100.00 E-value=4e-33 Score=251.03 Aligned_cols=289 Identities=14% Similarity=0.112 Sum_probs=218.7
Q ss_pred hcCCCCCCCC-cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChh--hhhhhccCcEEEEEeCCCCCCccccHHHHH
Q 019899 9 LGQAVSFDPS-QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFD--RDIRFRTGVELIPVHCRSTDNFAFSITALD 85 (334)
Q Consensus 9 ~~~~~~~~~~-~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~--~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~ 85 (334)
+++.++++++ +|++|+|+++++..++.+++++||+|+++.|+|+++. ..++ ..|.+++.++++ .++.+|+++++
T Consensus 61 la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~-~~g~~~~~v~~~--~~~~~d~~~l~ 137 (393)
T 2huf_A 61 VRYLFQTNNIATFCLSASGHGGMEATLCNLLEDGDVILIGHTGHWGDRSADMAT-RYGADVRVVKSK--VGQSLSLDEIR 137 (393)
T ss_dssp HHHHHTCCCSEEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHH-HTTCEEEEEECC--TTCCCCHHHHH
T ss_pred HHHHhCCCCCcEEEEcCcHHHHHHHHHHHHhCCCCEEEEECCCcchHHHHHHHH-HcCCeeEEEeCC--CCCCCCHHHHH
Confidence 3333445665 8999999999999999999999999999999998742 2334 579999999984 34579999999
Q ss_pred HHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCc
Q 019899 86 QAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDR 165 (334)
Q Consensus 86 ~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (334)
+++++. ++++|++++|+||||.++| +++|.++|+++|+++|+|++++.. ..... +.. .+.
T Consensus 138 ~~i~~~-----~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~li~D~a~~~~----~~~~~---~~~-----~~~ 197 (393)
T 2huf_A 138 DALLIH-----KPSVLFLTQGDSSTGVLQG---LEGVGALCHQHNCLLIVDTVASLG----GAPMF---MDR-----WEI 197 (393)
T ss_dssp HHHHHH-----CCSEEEEESEETTTTEECC---CTTHHHHHHHTTCEEEEECTTTBT----TBCCC---TTT-----TTC
T ss_pred HHHhcc-----CCcEEEEEccCCCccccCC---HHHHHHHHHHcCCEEEEEcccccC----CCCcc---hhh-----cCc
Confidence 999863 6899999999999999999 889999999999999999997642 11111 111 456
Q ss_pred EEEEecccccC-CCCCceEEEEeecCHHHHHHHHHhh----cc---------------------cCCChHHHHHHHHhhC
Q 019899 166 VHIIYGLSKDL-SLPGFRTGVIYSYNESVLAAAKKLT----RF---------------------CSISAPTQRLLISMLS 219 (334)
Q Consensus 166 ~~~~~s~sK~~-~~~g~r~g~i~~~~~~~~~~~~~~~----~~---------------------~~~~~~~~~~~~~~l~ 219 (334)
++++.|+||++ |++|+ ||+++ ++++.+.++... .. ++.+...+.++..+++
T Consensus 198 d~~~~s~sK~l~g~~G~--G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~ 274 (393)
T 2huf_A 198 DAMYTGSQKVLGAPPGI--TPVSF-SHRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIA 274 (393)
T ss_dssp SEEECCSSSTTCCCSSC--EEEEE-CHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHH
T ss_pred cEEEECCCcccccCCCe--EEEEE-CHHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHH
Confidence 78899999985 56676 99998 788888887531 10 1334555555555553
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC---ceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCC
Q 019899 220 DTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESS---AGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPG 296 (334)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g 296 (334)
... +..+.+..++++++++++.+.|++.|+++..+. .+++++++++... +..++...|++++||.+.+|
T Consensus 275 ~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~L~~~~gi~v~~g 346 (393)
T 2huf_A 275 MAC--EEGLPALIARHEDCAKRLYRGLQDAGFELYADPKDRLSTVTTIKVPQGV------DWLKAAQYAMKTYLVEISGG 346 (393)
T ss_dssp HHH--HHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCTTEEEEECCTTC------CHHHHHHHHHHHHCEECBCC
T ss_pred HHH--HhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCccccCCcEEEEEcCCCC------CHHHHHHHHHHhCCEEEecC
Confidence 211 223567788888999999999998888876653 3557778876322 34678888777679999998
Q ss_pred CCcCCCCCCeEEEEe-cC-CCcccHHHHHHHHHHHHHHc
Q 019899 297 SACHCIEPGWFRCCF-TS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 297 ~~~~~~~~~~iRi~~-~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
..+. .++++|+++ +. .+++++++++++|++++++.
T Consensus 347 ~~~~--~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~~ 383 (393)
T 2huf_A 347 LGPT--AGQVFRIGLMGQNATTERVDRVLQVFQEAVAAV 383 (393)
T ss_dssp CGGG--TTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHH
T ss_pred cccc--cCCEEEEEcccCcCCHHHHHHHHHHHHHHHHHc
Confidence 8663 368999999 53 46889999999999998764
No 93
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=100.00 E-value=3.2e-33 Score=251.46 Aligned_cols=292 Identities=14% Similarity=0.127 Sum_probs=222.0
Q ss_pred hhhhhhhcCCCCCCCC-cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCCh--hhhhhhccCcEEEEEeCCCCCCccc
Q 019899 3 GFMSQVLGQAVSFDPS-QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGF--DRDIRFRTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 3 ~~~~~~~~~~~~~~~~-~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~--~~~~~~~~g~~v~~v~~~~~~~~~~ 79 (334)
+++.+.++ .+.+ +|++|+|+++++..++.+++++||+|+++.++|++. ...+. ..|.+++.++++ .++.+
T Consensus 63 ~~la~~~~----~~~~~~v~~~~gg~~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~-~~g~~~~~~~~~--~~~~~ 135 (393)
T 3kgw_A 63 QGIQYVFQ----TRNPLTLVVSGSGHCAMETALFNLLEPGDSFLTGTNGIWGMRAAEIAD-RIGARVHQMIKK--PGEHY 135 (393)
T ss_dssp HHHHHHHT----CCCSEEEEESCCTTTHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHH-HTTCEEEEEECC--TTCCC
T ss_pred HHHHHHhC----CCCCcEEEEeCCcHHHHHHHHHhcCCCCCEEEEEeCCchhHHHHHHHH-HcCCceEEEeCC--CCCCC
Confidence 34444444 4444 599999999999999999999999999998887532 45566 789999999984 34579
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
|++++++++++. ++++|++++|+||||.+++ +++|.++|++||+++|+|++|+.... .... ..
T Consensus 136 d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~g~~----~~~~---~~-- 198 (393)
T 3kgw_A 136 TLQEVEEGLAQH-----KPVLLFLVHGESSTGVVQP---LDGFGELCHRYQCLLLVDSVASLGGV----PIYM---DQ-- 198 (393)
T ss_dssp CHHHHHHHHHHH-----CCSEEEEESEETTTTEECC---CTTHHHHHHHTTCEEEEECTTTTTTS----CCCT---TT--
T ss_pred CHHHHHHHHhhC-----CCcEEEEeccCCcchhhcc---HHHHHHHHHHcCCEEEEECCccccCc----ccch---hh--
Confidence 999999999874 7899999999999999999 88999999999999999999874211 1111 11
Q ss_pred ccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc-------------------------ccCCChHHHHHH
Q 019899 160 EVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR-------------------------FCSISAPTQRLL 214 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~ 214 (334)
.+.++++.|+||+++ .+.++|++++ ++++.+.+..... .++.+...+.++
T Consensus 199 ---~~~d~~~~s~sK~~~-~~~g~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 273 (393)
T 3kgw_A 199 ---QGIDIMYSSSQKVLN-APPGISLISF-NDKAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCL 273 (393)
T ss_dssp ---TTCCEEEEESSSTTC-CCSSCEEEEE-CHHHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHH
T ss_pred ---cCCCEEEecCccccc-CCCceeEEEE-CHHHHHHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHH
Confidence 456788889999884 3344899998 8888888865321 124466666666
Q ss_pred HHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC----ceeEEeeecCCcCCCCChhhHHHHHHHHHHhcC
Q 019899 215 ISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESS----AGLYCWADMSGLIPSYSEKGELELWDKLLNIAK 290 (334)
Q Consensus 215 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g 290 (334)
..++...+ +..+.+..+++.++++++.+.|++.|+++..+. .++++++.++... +..++...|++++|
T Consensus 274 ~~al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~g 345 (393)
T 3kgw_A 274 RESLALIA--EQGLENCWRRHREATAHLHKHLQEMGLKFFVKDPEIRLPTITTVTVPAGY------NWRDIVSYVLDHFS 345 (393)
T ss_dssp HHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCSSEEEEECCTTB------CHHHHHHHHHHHHC
T ss_pred HHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcCCeEEEEeCCCCC------CHHHHHHHHHHhCC
Confidence 56554321 233677888999999999999999888776433 2566778877532 34688888777669
Q ss_pred eEEcCCCCcCCCCCCeEEEEe-cC-CCcccHHHHHHHHHHHHHHc
Q 019899 291 INVTPGSACHCIEPGWFRCCF-TS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 291 i~v~~g~~~~~~~~~~iRi~~-~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
|.+.+|..+. .++++|+++ +. .+++++++++++|++++++.
T Consensus 346 i~v~~g~~~~--~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~ 388 (393)
T 3kgw_A 346 IEISGGLGPT--EERVLRIGLLGYNATTENVDRVAEALREALQHC 388 (393)
T ss_dssp EECBCCCGGG--TTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHS
T ss_pred EEEeCCcccC--CCCEEEEEecccCCCHHHHHHHHHHHHHHHHhh
Confidence 9999988543 467999998 64 48999999999999999875
No 94
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=100.00 E-value=3.9e-33 Score=251.97 Aligned_cols=292 Identities=15% Similarity=0.213 Sum_probs=220.8
Q ss_pred hhhhhcCCCCC-CCCcEEEecCcHHHHHHHHHHh----cCCCCeEEecCCCCCChhhh----hhhccCcEEEEEeCCCCC
Q 019899 5 MSQVLGQAVSF-DPSQIVLTAGATPAVEILCFCL----ADHGNALLVPSPYYPGFDRD----IRFRTGVELIPVHCRSTD 75 (334)
Q Consensus 5 ~~~~~~~~~~~-~~~~i~~~~g~~~~~~~~~~~l----~~~gd~vl~~~p~~~~~~~~----~~~~~g~~v~~v~~~~~~ 75 (334)
+++.+++.++. ++++|++|+|+++++..++.++ +++||+|+++.|+|++.... ++ ..|.+++.++++ .
T Consensus 72 l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~--~ 148 (406)
T 1kmj_A 72 VRKRASLFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCA-RVGAELRVIPLN--P 148 (406)
T ss_dssp HHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHH-HHTCEEEEECBC--T
T ss_pred HHHHHHHHcCCCCCCeEEEeCChhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHH-hCCCEEEEEecC--C
Confidence 44445555566 6789999999999999999999 89999999999999876543 44 579999999984 4
Q ss_pred CccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhh
Q 019899 76 NFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEI 155 (334)
Q Consensus 76 ~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~ 155 (334)
++.+|++++++++++ ++++|++++|+||||.++| +++|.++|+++|+++|+|++|+.+.. ..++..
T Consensus 149 ~~~~d~~~l~~~l~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~g~~----~~~~~~- 214 (406)
T 1kmj_A 149 DGTLQLETLPTLFDE------KTRLLAITHVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAVMHH----PVDVQA- 214 (406)
T ss_dssp TSCBCGGGHHHHCCT------TEEEEEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTS----CCCHHH-
T ss_pred CCCcCHHHHHHHhcc------CCeEEEEeCCCccccCcCC---HHHHHHHHHHcCCEEEEEchhhcCCC----CCcccc-
Confidence 567899999999875 7899999999999999999 99999999999999999999986332 112221
Q ss_pred hhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc---------------------c--cCCChHHHH
Q 019899 156 LEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR---------------------F--CSISAPTQR 212 (334)
Q Consensus 156 ~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~---------------------~--~~~~~~~~~ 212 (334)
.+.++++.|+||.+|++| +||+++ ++++.+.++.... . .+.++..+.
T Consensus 215 -------~~~d~~~~s~~K~~g~~G--~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (406)
T 1kmj_A 215 -------LDCDFYVFSGHKLYGPTG--IGILYV-KEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGI 284 (406)
T ss_dssp -------HTCSEEEEEGGGTTSCTT--CEEEEE-CHHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHH
T ss_pred -------cCCCEEEEEchhccCCCC--cEEEEE-eHHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHH
Confidence 356788999999998777 799998 7888877754321 0 123444444
Q ss_pred HHH-HhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCC--CceeEEeeecCCcCCCCChhhHHHHHHHHHHh
Q 019899 213 LLI-SMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSES--SAGLYCWADMSGLIPSYSEKGELELWDKLLNI 288 (334)
Q Consensus 213 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 288 (334)
++. .+++..+ +..+.+.+++++++++++.+.|++. ++++..+ .++++.| .++.. +..++... +.+
T Consensus 285 ~a~~~al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~~-l~~ 353 (406)
T 1kmj_A 285 IGLGAALEYVS--ALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAF-NLGKH-------HAYDVGSF-LDN 353 (406)
T ss_dssp HHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHTTSTTEEEESCTTCCSEEEE-EETTC-------CHHHHHHH-HHH
T ss_pred HHHHHHHHHHH--HcCHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCcCCEEEE-EECCC-------CHHHHHHH-Hhh
Confidence 333 3332211 2245677888889999999999987 7887776 6676654 56531 24567766 566
Q ss_pred cCeEEcCCCCcCC------CCCCeEEEEecC-CCcccHHHHHHHHHHHHHHcC
Q 019899 289 AKINVTPGSACHC------IEPGWFRCCFTS-LTHEDIPLVIERIQKVAETCK 334 (334)
Q Consensus 289 ~gi~v~~g~~~~~------~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~~ 334 (334)
+||.+.||..|.. ..++++|++++. .+++|++++++.|+++++..+
T Consensus 354 ~gi~v~~g~~~~~~~~~~~g~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~l~ 406 (406)
T 1kmj_A 354 YGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHRLLG 406 (406)
T ss_dssp TTEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred CCcEEEeccccchHHHHhcCCCCeEEEEeecCCCHHHHHHHHHHHHHHHHhhC
Confidence 8999999875432 125799999996 499999999999999987653
No 95
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=100.00 E-value=7.6e-33 Score=249.11 Aligned_cols=293 Identities=13% Similarity=0.061 Sum_probs=219.4
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChh--hhhhhccCcEEEEEeCCCCCCccccHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFD--RDIRFRTGVELIPVHCRSTDNFAFSIT 82 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~--~~~~~~~g~~v~~v~~~~~~~~~~~~~ 82 (334)
+++.+++.++++++++++|+|+++++..++.+++++||+|+++.|+|+++. ..++ ..|.+++.+++++ ++.+|++
T Consensus 47 l~~~la~~~g~~~~~v~~t~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-~~g~~~~~v~~~~--~~~~d~~ 123 (392)
T 2z9v_A 47 VVDKAQKAMRLSNKPVILHGEPVLGLEAAAASLISPDDVVLNLASGVYGKGFGYWAK-RYSPHLLEIEVPY--NEAIDPQ 123 (392)
T ss_dssp HHHHHHHHTTCSSCCEEESSCTHHHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHH-HHCSCEEEEECCT--TSCCCHH
T ss_pred HHHHHHHHhCCCCCEEEEeCCchHHHHHHHHHhcCCCCEEEEecCCcccHHHHHHHH-HcCCceEEeeCCC--CCCCCHH
Confidence 344444555667889999999999999999999999999999999998763 2334 5799999999843 3469999
Q ss_pred HHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccC
Q 019899 83 ALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVD 162 (334)
Q Consensus 83 ~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (334)
++++++++ ..++++|++++|+||||.++| +++|.++|+++|+++|+|++|+... ...++..
T Consensus 124 ~l~~~l~~----~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~----~~~~~~~-------- 184 (392)
T 2z9v_A 124 AVADMLKA----HPEITVVSVCHHDTPSGTINP---IDAIGALVSAHGAYLIVDAVSSFGG----MKTHPED-------- 184 (392)
T ss_dssp HHHHHHHH----CTTCCEEEEESEEGGGTEECC---HHHHHHHHHHTTCEEEEECTTTBTT----BSCCGGG--------
T ss_pred HHHHHHhc----CCCCcEEEEeccCCCCceecc---HHHHHHHHHHcCCeEEEEcccccCC----ccccccc--------
Confidence 99999974 126899999999999999999 8899999999999999999997421 1112211
Q ss_pred CCcEEEEecccccCC-CCCceEEEEeecCHHHHHHHHHhh----------------------cccCCChHHHHHHHHhhC
Q 019899 163 KDRVHIIYGLSKDLS-LPGFRTGVIYSYNESVLAAAKKLT----------------------RFCSISAPTQRLLISMLS 219 (334)
Q Consensus 163 ~~~~~~~~s~sK~~~-~~g~r~g~i~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~l~ 219 (334)
.+.++++.|+||+++ ++| +||+++ ++++.+.++... ..++.+...+.++..+++
T Consensus 185 ~~~d~~~~s~sK~~~~~~g--~G~l~~-~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~ 261 (392)
T 2z9v_A 185 CKADIYVTGPNKCLGAPPG--LTMMGV-SERAWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALD 261 (392)
T ss_dssp GTCSEEEECSSSTTCCCSC--CEEEEE-CHHHHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHH
T ss_pred ccceEEEecCcccccCCCc--eeEEEE-CHHHHHHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHH
Confidence 345688899999764 445 599998 788877776421 112344455555555553
Q ss_pred ChHHHHHH-HHHHHHHHHHHHHHHHHHHHhCCCcccCCC----ceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEc
Q 019899 220 DTKFIQEY-LETNKRRIKKLYDSFVAGLKQLGIRCSESS----AGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVT 294 (334)
Q Consensus 220 ~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~ 294 (334)
. +.+. +.+.+++++++++++.+.|+++|+++..+. .+.++++.++... +..++...|.+++||.+.
T Consensus 262 ~---~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~L~~~~gi~v~ 332 (392)
T 2z9v_A 262 L---YLNEGPEAVWARHALTAKAMRAGVTAMGLSVWAASDSIASPTTTAVRTPDGV------DEKALRQAARARYGVVFS 332 (392)
T ss_dssp H---HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCTTEEEEECCTTC------CHHHHHHHHHHHHCEECE
T ss_pred H---HHhccHHHHHHHHHHHHHHHHHHHHHcCCeeccCCccccCCceEEEECCCCC------CHHHHHHHHHhcCCEEEe
Confidence 2 2333 567788899999999999988888776533 3566778876422 346788886665599999
Q ss_pred CCCCcCCCCCCeEEEEe-c-CCCcccHHHHHHHHHHHHHHc
Q 019899 295 PGSACHCIEPGWFRCCF-T-SLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 295 ~g~~~~~~~~~~iRi~~-~-~~~~~~l~~~l~~l~~~~~~~ 333 (334)
+|..+. .++++|+++ + ..+++++++++++|++++++.
T Consensus 333 ~g~~~~--~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~~ 371 (392)
T 2z9v_A 333 SGRGET--LGKLTRIGHMGPTAQPIYAIAALTALGGAMNAA 371 (392)
T ss_dssp ECCGGG--TTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCC--CCCeEEEeCcccccCHHHHHHHHHHHHHHHHHc
Confidence 988543 368999995 5 479999999999999998765
No 96
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=100.00 E-value=7.9e-33 Score=251.14 Aligned_cols=291 Identities=17% Similarity=0.232 Sum_probs=219.4
Q ss_pred hhhhhcCCCCC-CCCcEEEecCcHHHHHHHHHHh----cCCCCeEEecCCCCCCh----hhhhhhccCcEEEEEeCCCCC
Q 019899 5 MSQVLGQAVSF-DPSQIVLTAGATPAVEILCFCL----ADHGNALLVPSPYYPGF----DRDIRFRTGVELIPVHCRSTD 75 (334)
Q Consensus 5 ~~~~~~~~~~~-~~~~i~~~~g~~~~~~~~~~~l----~~~gd~vl~~~p~~~~~----~~~~~~~~g~~v~~v~~~~~~ 75 (334)
+++.+++.++. +++++++|+|+++++..++.++ +++||+|+++.|+|++. ...++ ..|.+++.++++ +
T Consensus 77 l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~--~ 153 (420)
T 1t3i_A 77 VRNKVAKFINARSPREIVYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAA-KTGAVLKFVQLD--E 153 (420)
T ss_dssp HHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHH-HHCCEEEEECBC--T
T ss_pred HHHHHHHHcCCCCCCeEEEcCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHH-hcCcEEEEeccC--C
Confidence 34445555556 6789999999999999999999 89999999999999984 44455 679999999984 5
Q ss_pred CccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhh
Q 019899 76 NFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEI 155 (334)
Q Consensus 76 ~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~ 155 (334)
++.+|++++++++++ ++++|++++|+||||.++| +++|.++|+++|+++|+|++|+.+.. ...+..
T Consensus 154 ~~~~d~~~l~~~l~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~----~~~~~~- 219 (420)
T 1t3i_A 154 QESFDLEHFKTLLSE------KTKLVTVVHISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSAPHY----PLDVQL- 219 (420)
T ss_dssp TSSBCHHHHHHHCCT------TEEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTS----CCCHHH-
T ss_pred CCCcCHHHHHHhhCC------CceEEEEeCCcccccCcCC---HHHHHHHHHHcCCEEEEEhhhccCCc----cCchhh-
Confidence 567999999999875 7899999999999999999 89999999999999999999986432 112222
Q ss_pred hhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc----------------------cCCChHHHHH
Q 019899 156 LEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF----------------------CSISAPTQRL 213 (334)
Q Consensus 156 ~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~ 213 (334)
.+.++++.|+||.+|++| +||+++ ++++.+.++..... .+.++..+.+
T Consensus 220 -------~~~di~~~s~sK~~~~~g--~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (420)
T 1t3i_A 220 -------IDCDWLVASGHKMCAPTG--IGFLYG-KEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAI 289 (420)
T ss_dssp -------HTCSEEEEEGGGTTSCTT--CEEEEE-CHHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHH
T ss_pred -------cCCCEEEEehhhhcCCCc--eEEEEE-chHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHH
Confidence 346788899999888667 899998 78888777543221 1244444444
Q ss_pred HHH-hhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCC------ceeEEeeecCCcCCCCChhhHHHHHHHH
Q 019899 214 LIS-MLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSESS------AGLYCWADMSGLIPSYSEKGELELWDKL 285 (334)
Q Consensus 214 ~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~------~g~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (334)
+.. .++..+ +..+.++.++++++++++.+.|++. |+++..+. ++++ ++.++.. +..++.+.
T Consensus 290 a~~~al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~-------~~~~~~~~- 358 (420)
T 1t3i_A 290 ALGAAVDYLT--DLGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALA-SFNVAGL-------HASDVATM- 358 (420)
T ss_dssp HHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCSEE-EEEETTB-------CHHHHHHH-
T ss_pred HHHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCccccccCCEE-EEEECCC-------CHHHHHHH-
Confidence 332 332211 1235677888899999999999987 78877664 4554 4566631 23567666
Q ss_pred HHhcCeEEcCCCCcCC------CCCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 286 LNIAKINVTPGSACHC------IEPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 286 l~~~gi~v~~g~~~~~------~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
++++||.+.||..|.. ..++++|++++. .++++++++++.|++++++.
T Consensus 359 l~~~gi~v~~~~~~~~~~~~~~g~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~~ 413 (420)
T 1t3i_A 359 VDQDGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQATIRFF 413 (420)
T ss_dssp HHTTTEECBCSCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHCCeEEeeccccchHHHHhcCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHh
Confidence 6668999999865421 115789999995 58999999999999998764
No 97
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=3.9e-33 Score=251.07 Aligned_cols=293 Identities=15% Similarity=0.107 Sum_probs=217.0
Q ss_pred hhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCC-------------CCeEEecCCCCCChhhhhhhccCcEEEEEeCCC
Q 019899 7 QVLGQAVSFDPSQIVLTAGATPAVEILCFCLADH-------------GNALLVPSPYYPGFDRDIRFRTGVELIPVHCRS 73 (334)
Q Consensus 7 ~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~-------------gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~ 73 (334)
+.+++.+++++++|++|+|+++++..++.++..+ ||+|+++.|+|+++...++ ..|.+++.+|++
T Consensus 76 ~~la~~~~~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~-~~g~~~~~v~~~- 153 (397)
T 3f9t_A 76 ALLGSLLNNKDAYGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGRE-MMDLEYIYAPIK- 153 (397)
T ss_dssp HHHHHHTTCTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHHH-HHTCEEEEECBC-
T ss_pred HHHHHHhCCCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHHH-HcCceeEEEeeC-
Confidence 3344445678889999999999999999998765 9999999999999999998 889999999984
Q ss_pred CCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCc-chh
Q 019899 74 TDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEF-VSM 152 (334)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~-~~~ 152 (334)
.++.+|++++++++++. +++++++++|+||||.+.+ +++|.++|++||+++|+|++|+.+.++.... ..+
T Consensus 154 -~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~ 224 (397)
T 3f9t_A 154 -EDYTIDEKFVKDAVEDY-----DVDGIIGIAGTTELGTIDN---IEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKK 224 (397)
T ss_dssp -TTSSBCHHHHHHHHHHS-----CCCEEEEEBSCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCC
T ss_pred -CCCcCCHHHHHHHHhhc-----CCeEEEEECCCCCCCCCCC---HHHHHHHHHHhCCeEEEEccccchhhhhccccccc
Confidence 45789999999999863 6889999999999999998 8999999999999999999998765421110 000
Q ss_pred hhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhccc----------CC---ChHHHHHHHHhhC
Q 019899 153 AEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFC----------SI---SAPTQRLLISMLS 219 (334)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~----------~~---~~~~~~~~~~~l~ 219 (334)
..+....+...+.++++.|++|+++ +|.|+|+++++++.+.+.+......+ +. +...+.++...+.
T Consensus 225 ~~~~~~~~~~~~~~~~~~s~~K~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 303 (397)
T 3f9t_A 225 KGVNYKFDFSLGVDSITIDPHKMGH-CPIPSGGILFKDIGYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRYLG 303 (397)
T ss_dssp TTCCCCCSGGGTCSEEECCTTTTTC-CCSSCEEEEESSGGGGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHHH
T ss_pred ccccccccccccCCeEEEccccccC-CCCCceEEEEeCHHHHHhhccCCccccCCCccccccccccchHHHHHHHHHHHh
Confidence 0000000000145678899999886 77799999986766665543322221 11 2233333333331
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCc
Q 019899 220 DTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSAC 299 (334)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~ 299 (334)
...+.+..+++.++++++.+.|++.++++..+..+.+++++++. ..++...|.+ +||.+.++..
T Consensus 304 -----~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~---------~~~~~~~l~~-~gi~v~~~~~- 367 (397)
T 3f9t_A 304 -----REGQRKIVNECMENTLYLYKKLKENNFKPVIEPILNIVAIEDED---------YKEVCKKLRD-RGIYVSVCNC- 367 (397)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCCSSSEEEEECTT---------HHHHHHHHHH-TTCBCEECSS-
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEcCCCccEEEEEeCC---------HHHHHHHHHh-CCeEEeccCC-
Confidence 33456677788899999999999988886655556666777764 2577787555 6999988763
Q ss_pred CCCCCCeEEEEecC-CCcccHHHHHHHHHHHHH
Q 019899 300 HCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAE 331 (334)
Q Consensus 300 ~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~ 331 (334)
++++|++++. .+++++++++++|+++++
T Consensus 368 ----~~~~Ri~~~~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 368 ----VKALRIVVMPHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp ----SSEEEEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred ----CCEEEEEEcCCCCHHHHHHHHHHHHHhhC
Confidence 5799999985 599999999999998875
No 98
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=100.00 E-value=2.6e-33 Score=248.48 Aligned_cols=287 Identities=14% Similarity=0.043 Sum_probs=214.2
Q ss_pred hhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChh--hhhhhccCcEEEEEeCCCCCCccccHHH
Q 019899 6 SQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFD--RDIRFRTGVELIPVHCRSTDNFAFSITA 83 (334)
Q Consensus 6 ~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~--~~~~~~~g~~v~~v~~~~~~~~~~~~~~ 83 (334)
++.+++.++++++++++|+|+++++..++.++.++||+|+++.|+|+++. ..++ ..|.+++.++++ .++.+|+++
T Consensus 40 ~~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~-~~g~~~~~v~~~--~~~~~d~~~ 116 (352)
T 1iug_A 40 RGLLREAFRTEGEVLILTGSGTLAMEALVKNLFAPGERVLVPVYGKFSERFYEIAL-EAGLVVERLDYP--YGDTPRPED 116 (352)
T ss_dssp HHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHH-HTTCEEEEEECC--TTCCCCTTT
T ss_pred HHHHHHHhCCCCceEEEcCchHHHHHHHHHhccCCCCeEEEEeCCchhHHHHHHHH-HcCCceEEEeCC--CCCCCCHHH
Confidence 33344444566789999999999999999999999999999999999875 3334 579999999984 345688888
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc--CcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK--NIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~--~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
+++ + ++++|++++|+||||.+.+ +++|.++|+++ |+++|+|++|+... ....+. .
T Consensus 117 l~~---~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~~~li~D~a~~~~~----~~~~~~---~---- 173 (352)
T 1iug_A 117 VAK---E------GYAGLLLVHSETSTGALAD---LPALARAFKEKNPEGLVGADMVTSLLV----GEVALE---A---- 173 (352)
T ss_dssp SCC---S------SCSEEEEESEETTTTEECC---HHHHHHHHHHHCTTCEEEEECTTTBTT----BCCCSG---G----
T ss_pred Hhc---c------CCcEEEEEEecCCcceecC---HHHHHHHHHhhCCCCEEEEECCccccC----cceecc---c----
Confidence 876 2 7889999999999999999 88999999999 99999999987421 111111 1
Q ss_pred CCCcEEEEecccccCCCCCceEEEEeecCHHHHHH---------HH----H---hhcccCCChHHHHHHHHhhCChHHHH
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAA---------AK----K---LTRFCSISAPTQRLLISMLSDTKFIQ 225 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~---------~~----~---~~~~~~~~~~~~~~~~~~l~~~~~~~ 225 (334)
.+.++++.|+||+++ .+.++||+++ ++++.+. +. . ....++.+...+.++..++... .
T Consensus 174 -~~~d~~~~s~~K~~~-~~~g~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~---~ 247 (352)
T 1iug_A 174 -MGVDAAASGSQKGLM-CPPGLGFVAL-SPRALERLKPRGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEV---L 247 (352)
T ss_dssp -GTCSEEEEESSSTTC-CCSCEEEEEE-CHHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHH---G
T ss_pred -cCeeEEEecCccccc-CCCceeEEEE-CHHHHHHhhCCCceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHH---H
Confidence 245678899999664 2234799998 6666543 22 1 1223455666776666666432 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC-ceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCC
Q 019899 226 EYLETNKRRIKKLYDSFVAGLKQLGIRCSESS-AGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEP 304 (334)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~ 304 (334)
+++.+.+++++++++++.+.|++.|+++..+. .+.++|++++... +..++...|.+ +||.+.||..+ ..+
T Consensus 248 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~-~gi~v~~~~~~--~~~ 318 (352)
T 1iug_A 248 PRLEEHLALKAWQNALLYGVGEEGGLRPVPKRFSPAVAAFYLPEGV------PYARVKEAFAQ-RGAVIAGGQGP--LKG 318 (352)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHTTCEESCSSBCTTCEEEECCTTC------CHHHHHHHHHT-TTEECEECCGG--GTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCcccccccCCeEEEEEcCCCC------CHHHHHHHHHH-CCEEEEeCCCc--cCC
Confidence 22567788889999999999988888877664 5667888887422 34678888554 69999998843 246
Q ss_pred CeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 305 GWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 305 ~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
+++|++++. .+++++++++++|++++++.
T Consensus 319 ~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 348 (352)
T 1iug_A 319 KVFRLSLMGAYDRYEALGVAGMFREVLEEI 348 (352)
T ss_dssp TEEEECCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEccccCCHHHHHHHHHHHHHHHHHh
Confidence 799999986 47999999999999998753
No 99
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=100.00 E-value=5.1e-34 Score=254.87 Aligned_cols=287 Identities=18% Similarity=0.204 Sum_probs=217.1
Q ss_pred hcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHH
Q 019899 9 LGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAF 88 (334)
Q Consensus 9 ~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l 88 (334)
+++.++.+ ++++++|+++++..++.+++++||+|++++|+|+++...++ ..|.+++.++...+.++.+|++++++++
T Consensus 63 la~~~~~~--~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~~~l~~~l 139 (371)
T 2e7j_A 63 LPKFLGCD--VARVTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVAAE-RAGLNIALVPKTDYPDYAITPENFAQTI 139 (371)
T ss_dssp HHHHTTSS--EEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHH-HTTCEEEEECCCCTTTCCCCHHHHHHHH
T ss_pred HHHHcCCC--EEEEeCChHHHHHHHHHHHhCCCCEEEEccCcchHHHHHHH-HcCCeEEEeecccCCCCCcCHHHHHHHH
Confidence 44444444 99999999999999999999999999999999999999988 8999999999211345789999999999
Q ss_pred HHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEE
Q 019899 89 NQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHI 168 (334)
Q Consensus 89 ~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (334)
++...+ .+++++++++|+||||.+++ +++|.++|+++|+++|+|++|+.+..+ .+... .+.+++
T Consensus 140 ~~~~~~-~~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~~----~~~~~--------~~~di~ 203 (371)
T 2e7j_A 140 EETKKR-GEVVLALITYPDGNYGNLPD---VKKIAKVCSEYDVPLLVNGAYAIGRMP----VSLKE--------IGADFI 203 (371)
T ss_dssp HHHTTT-SCEEEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTTBTTBC----CCHHH--------HTCSEE
T ss_pred Hhhccc-CCeEEEEEECCCCCCcccCC---HHHHHHHHHHcCCeEEEECccccCCCC----CChhh--------cCCCEE
Confidence 853221 37899999999999999999 799999999999999999999875432 22222 234588
Q ss_pred EecccccCCCCCceEEEEeecCHHHHHH-HHHhhc---------ccCCChHHHHHHHHhhCChHHHHHHHHHHHHHH--H
Q 019899 169 IYGLSKDLSLPGFRTGVIYSYNESVLAA-AKKLTR---------FCSISAPTQRLLISMLSDTKFIQEYLETNKRRI--K 236 (334)
Q Consensus 169 ~~s~sK~~~~~g~r~g~i~~~~~~~~~~-~~~~~~---------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~ 236 (334)
+.|+||+++ .+.|+||+++ ++++.+. ++.... .++.+.....++...++. +.. +..+++ +
T Consensus 204 ~~s~sK~~~-~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~---~~~---~~~~~~~~~ 275 (371)
T 2e7j_A 204 VGSGHKSMA-ASGPIGVMGM-KEEWAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPH---VRE---RIKRWDEEV 275 (371)
T ss_dssp EEEHHHHSS-CCSSCEEEEE-CTTTTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHH---HHH---HGGGHHHHH
T ss_pred EecCCcCCC-CCCCcEEEEE-echhhhhhccccccCcccccccccCCcCHHHHHHHHHHHHH---HHH---HHHHHHHHH
Confidence 999999997 4459999999 5666665 554332 334445555555444432 122 455667 7
Q ss_pred HHHHHHHHHHHhCCCcccCCC--ceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCC----CCCCeEE-E
Q 019899 237 KLYDSFVAGLKQLGIRCSESS--AGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHC----IEPGWFR-C 309 (334)
Q Consensus 237 ~~~~~~~~~l~~~g~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~~~iR-i 309 (334)
++++++.+.|++.++++..+. .+.++|++++ +..++.+.|. ++||.+.| ..++. ..++++| +
T Consensus 276 ~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~l~-~~gi~~~~-~~~~~~~~g~~~~~iRii 344 (371)
T 2e7j_A 276 EKARRFAAEMEKLGIKQLGDNPHNHDLMFFHAE---------VLYEISKKAK-GGRFFLYR-ELKSRKIHGIKPGLTRYF 344 (371)
T ss_dssp HHHHHHHHHHHHTTCEEESSSSCCSSEEEEECH---------HHHHHHHHSS-SGGGHHHH-HHHHTTEECSCTTCCSEE
T ss_pred HHHHHHHHHHHHcCcEEecCCCccCceEEEECC---------CHHHHHHHHH-HCCEEEEe-ccccccccCCCCCceEEE
Confidence 888899999988888877653 3557888876 2357777744 68999988 43322 1257899 9
Q ss_pred EecC--CCcccHHHHHHHHHHHHHHc
Q 019899 310 CFTS--LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 310 ~~~~--~~~~~l~~~l~~l~~~~~~~ 333 (334)
+++. .+++++++++++|+++++++
T Consensus 345 ~~~~~~~~~~~i~~~~~~l~~~~~~~ 370 (371)
T 2e7j_A 345 KLSTYGLSDEEVDYVLNAFKEIIEKY 370 (371)
T ss_dssp EEECTTCCHHHHHHHHHHHHHHHHHC
T ss_pred EeeccCCCHHHHHHHHHHHHHHHHhc
Confidence 9985 58999999999999999875
No 100
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=100.00 E-value=1.8e-33 Score=252.94 Aligned_cols=287 Identities=19% Similarity=0.262 Sum_probs=216.5
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHh-cCCCCeEEecCCCCCChhhh----hhhccCcEEEEEeCCCCCCccc
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCL-ADHGNALLVPSPYYPGFDRD----IRFRTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l-~~~gd~vl~~~p~~~~~~~~----~~~~~g~~v~~v~~~~~~~~~~ 79 (334)
+++.+++.+++++++|++|+|+++++..++.++ +++||+|+++.|+|+++... ++ ..|.+++.+++++++++.+
T Consensus 64 l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~~~~~~~~ 142 (390)
T 1elu_A 64 LRQALAETFNVDPNTITITDNVTTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAA-RFGITYRFFPVAATLNQGD 142 (390)
T ss_dssp HHHHHHHHTTSCGGGEEEESSHHHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHH-HHCCEEEEECCGGGSSSSC
T ss_pred HHHHHHHHcCCCHHHEEEeCChHHHHHHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHH-HhCcEEEEEcCCCCCCccc
Confidence 444555556677889999999999999999999 89999999999999997754 34 5799999999854356789
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHH----hcCcEEEEeccccccccCCCCcchhhhh
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAR----EKNIHVISDEIYGGSIFGNEEFVSMAEI 155 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~----~~~~~vi~D~~~~~~~~~~~~~~~~~~~ 155 (334)
|++++++++++ ++++|++++|+||||.++| +++|.++|+ ++|+++|+|++|+... ....+
T Consensus 143 d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~li~Dea~~~g~----~~~~~--- 206 (390)
T 1elu_A 143 AAAVLANHLGP------KTRLVILSHLLWNTGQVLP---LAEIMAVCRRHQGNYPVRVLVDGAQSAGS----LPLDF--- 206 (390)
T ss_dssp HHHHHHTTCCT------TEEEEEEESBCTTTCCBCC---HHHHHHHHHHCCSSSCCEEEEECTTTBTT----BCCCT---
T ss_pred hHHHHHHhcCC------CceEEEEeccccCCceecC---HHHHHHHHhhhhhhcCcEEEEEcccccCC----cCCCh---
Confidence 99999998875 7899999999999999999 889999999 9999999999998522 11111
Q ss_pred hhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh------------------------hcccCCChHHH
Q 019899 156 LEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL------------------------TRFCSISAPTQ 211 (334)
Q Consensus 156 ~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~------------------------~~~~~~~~~~~ 211 (334)
.. .+.++++.|+||+++ .|.++||+++ ++++.+.+... ...++.+...+
T Consensus 207 ~~-----~~~d~~~~s~~K~~~-~~~g~G~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (390)
T 1elu_A 207 SR-----LEVDYYAFTGHKWFA-GPAGVGGLYI-HGDCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQY 279 (390)
T ss_dssp TT-----SCCSEEEEESSSTTC-CCTTCEEEEE-CTTTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHH
T ss_pred hh-----cCCCEEEcccccccc-CCCceEEEEE-CHHhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHH
Confidence 11 456788999999553 5566899998 66666655431 11234555666
Q ss_pred HHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccC---CCceeEEeeecCCcCCCCChhhHHHHHHHHHH
Q 019899 212 RLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSE---SSAGLYCWADMSGLIPSYSEKGELELWDKLLN 287 (334)
Q Consensus 212 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 287 (334)
.++..++..... ..++.+.+++++++++++.+.|+++ |+++.. +.++++. ++++... +..++.+.| .
T Consensus 280 ~a~~~al~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~l-~ 350 (390)
T 1elu_A 280 AGLLAALQLHQR-QGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQAGLVS-FTVDSPL------GHRAIVQKL-E 350 (390)
T ss_dssp HHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSSSEEE-EEECSSS------CHHHHHHHH-H
T ss_pred HHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCccccccEEE-EEcCCCC------CHHHHHHHH-H
Confidence 666555543211 1235778888999999999999987 887764 3456555 4776322 345788885 5
Q ss_pred hcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHH
Q 019899 288 IAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKV 329 (334)
Q Consensus 288 ~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~ 329 (334)
++||.+.+|. .++++|++++. .+++++++++++|+++
T Consensus 351 ~~gi~v~~~~-----~~~~iRis~~~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 351 EQRIYLRTIA-----DPDCIRACCHYITDEEEINHLLARLADF 388 (390)
T ss_dssp HTTEECEEET-----TTTEEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred HCCEEEEecC-----CCCeEEEecccCCCHHHHHHHHHHHHhh
Confidence 6899999876 25789999964 6999999999998753
No 101
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=100.00 E-value=2.2e-32 Score=245.56 Aligned_cols=276 Identities=13% Similarity=0.138 Sum_probs=210.8
Q ss_pred cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCce
Q 019899 19 QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKV 98 (334)
Q Consensus 19 ~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 98 (334)
+.++++++++++..++.+++++||.|+++.|+|+.+...++ ..|.+++.+|. .|++++++++++. ..++
T Consensus 101 ~~i~~~sGt~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~-~~g~~~~~~~~-------~d~~~l~~~l~~~---~~~~ 169 (384)
T 1bs0_A 101 RALLFISGFAANQAVIAAMMAKEDRIAADRLSHASLLEAAS-LSPSQLRRFAH-------NDVTHLARLLASP---CPGQ 169 (384)
T ss_dssp EEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHH-TSSSEEEEECT-------TCHHHHHHHHHSC---CSSC
T ss_pred cEEEeCCcHHHHHHHHHHhCCCCcEEEEcccccHHHHHHHH-HcCCCEEEeCC-------CCHHHHHHHHHhc---CCCC
Confidence 45555555899999999999999999999999999999998 88999999884 4789999888752 1136
Q ss_pred eEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEecccccCCC
Q 019899 99 RGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSL 178 (334)
Q Consensus 99 ~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~ 178 (334)
+++++++|+||||.++| +++|.++|+++|+++|+||+|+.+.++... .++....+ .+.++++.|+||++++
T Consensus 170 ~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~-~~~~~~~~-----~~~di~~~s~sK~~~~ 240 (384)
T 1bs0_A 170 QMVVTEGVFSMDGDSAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGEQG-RGSCWLQK-----VKPELLVVTFGKGFGV 240 (384)
T ss_dssp EEEEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSSGGG-CCHHHHTT-----CCCSEEEEESSSTTSS
T ss_pred eEEEEeCCCCCCCCccC---HHHHHHHHHHcCcEEEEECCcccceecCCC-CchHHhcC-----CCCcEEEeeccchhhc
Confidence 88889999999999999 899999999999999999999876543111 11111111 2345889999999996
Q ss_pred CCceEEEEeecCHHHHHHHHHhhcc----cCCChHHHHHHHHhhCChHHHHH-HHHHHHHHHHHHHHHHHHHHHhCCCcc
Q 019899 179 PGFRTGVIYSYNESVLAAAKKLTRF----CSISAPTQRLLISMLSDTKFIQE-YLETNKRRIKKLYDSFVAGLKQLGIRC 253 (334)
Q Consensus 179 ~g~r~g~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~g~~~ 253 (334)
+| ||+++ ++++++.+...... .+.++..+.++...++.. .+ +..+.+++++++++++.+.|++.|+++
T Consensus 241 ~G---G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~---~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 313 (384)
T 1bs0_A 241 SG---AAVLC-SSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVI---RSDEGDARREKLAALITRFRAGVQDLPFTL 313 (384)
T ss_dssp CC---EEEEE-CHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHH---HSHHHHHHHHHHHHHHHHHHHHHTTSSCEE
T ss_pred cC---cEEEe-CHHHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHH---hccccHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 66 99998 78888888764322 246777777766666432 21 446778889999999999999988877
Q ss_pred cCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC-CCCeEEEEecC-CCcccHHHHHHHHHHH
Q 019899 254 SESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI-EPGWFRCCFTS-LTHEDIPLVIERIQKV 329 (334)
Q Consensus 254 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~-~~~~iRi~~~~-~~~~~l~~~l~~l~~~ 329 (334)
.. ..+.++|++++.. .+..++...|++ +||.+.|+..++.. .++++|++++. .+++++++++++|+++
T Consensus 314 ~~-~~~~~~~~~~~~~------~~~~~l~~~l~~-~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 314 AD-SCSAIQPLIVGDN------SRALQLAEKLRQ-QGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp CS-CCSSBCCEEEESH------HHHHHHHHHHHH-TTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred cC-CCCCEEEEEeCCH------HHHHHHHHHHHH-CCcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 64 4556667887632 245678888655 69999998877532 34789999985 4899999999999875
No 102
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=100.00 E-value=2.1e-32 Score=242.55 Aligned_cols=289 Identities=13% Similarity=0.061 Sum_probs=214.9
Q ss_pred hhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCCh--hhhhhhccCcEEEEEeCCCCCCcccc
Q 019899 3 GFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGF--DRDIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 3 ~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~--~~~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
+++.+.++ ...+++++++|+|+++++..++.++.+ |+|++++++|+++ ...++ ..|.+++.++++ .++.+|
T Consensus 40 ~~la~~~g--~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl~~~~~~~~~~~~~~~~-~~g~~~~~v~~~--~~~~~d 112 (353)
T 2yrr_A 40 ERLAALFD--PGEGALVAALAGSGSLGMEAGLANLDR--GPVLVLVNGAFSQRVAEMAA-LHGLDPEVLDFP--PGEPVD 112 (353)
T ss_dssp HHHHHHHC--CCTTCEEEEESSCHHHHHHHHHHTCSC--CCEEEEECSHHHHHHHHHHH-HTTCCEEEEECC--TTSCCC
T ss_pred HHHHHHhC--CCCCCceEEEcCCcHHHHHHHHHHhcC--CcEEEEcCCCchHHHHHHHH-HcCCceEEEeCC--CCCCCC
Confidence 44455444 223467899999999999999999876 8999999999875 33445 689999999984 345799
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++. ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+... ...++..
T Consensus 113 ~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~li~D~a~~~~~----~~~~~~~------ 174 (353)
T 2yrr_A 113 PEAVARALKRR-----RYRMVALVHGETSTGVLNP---AEAIGALAKEAGALFFLDAVTTLGM----LPFSMRA------ 174 (353)
T ss_dssp HHHHHHHHHHS-----CCSEEEEESEETTTTEECC---HHHHHHHHHHHTCEEEEECTTTTTT----SCCCHHH------
T ss_pred HHHHHHHHHhC-----CCCEEEEEccCCCcceecC---HHHHHHHHHHcCCeEEEEcCccccc----ccccccc------
Confidence 99999999862 6889999999999999999 8899999999999999999996422 1122222
Q ss_pred cCCCcEEEEecccccC-CCCCceEEEEeecCHHHHHHHHH-----------------hhcccCCChHHHHHHHHhhCChH
Q 019899 161 VDKDRVHIIYGLSKDL-SLPGFRTGVIYSYNESVLAAAKK-----------------LTRFCSISAPTQRLLISMLSDTK 222 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~-~~~g~r~g~i~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~l~~~~ 222 (334)
.+.++++.|++|++ +++| +||+++ ++++.+.++. ....++.+...+.++..++....
T Consensus 175 --~~~d~~~~s~~K~~~~~~g--~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~ 249 (353)
T 2yrr_A 175 --MGVDYAFTGSQKCLSAPPG--LAPIAA-SLEARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLVL 249 (353)
T ss_dssp --HTCSEEECCTTSTTCCCSS--CEEEEE-CHHHHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHH
T ss_pred --cCceEEEecCcccccCCCc--eEEEEE-CHHHHHHhccCCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHH
Confidence 23457788999976 4455 699998 7777766531 11123456666666665554321
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC--ceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcC
Q 019899 223 FIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESS--AGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACH 300 (334)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~ 300 (334)
+..+.+.+++++++++++.+.|++.|+++..+. .++++|+++|... +..++.+.|.+ +||.+.||..+.
T Consensus 250 --~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~-~gi~v~~g~~~~ 320 (353)
T 2yrr_A 250 --EEGVAARERRAREVYAWVLEELKARGFRPYPKASPLPTVLVVRPPEGV------DADRLVRALYA-EGVAVAGGIGPT 320 (353)
T ss_dssp --HHCHHHHHHHHHHHHHHHHHHHHHTTCEESCSSSBCTTEEEEECCTTC------CHHHHHHHHHH-TTEECEECCGGG
T ss_pred --HhhHHHHHHHHHHHHHHHHHHHHHCCCccccCccCCCeEEEEECCCCC------CHHHHHHHHHH-CCEEEeCCcccc
Confidence 222567788899999999999988888776554 5667788886422 34678888555 699999988664
Q ss_pred CCCCCeEEEEec-CCCcccHH-HHHHHHHHHHHH
Q 019899 301 CIEPGWFRCCFT-SLTHEDIP-LVIERIQKVAET 332 (334)
Q Consensus 301 ~~~~~~iRi~~~-~~~~~~l~-~~l~~l~~~~~~ 332 (334)
.++++|++++ ..++++++ +++++|+++++.
T Consensus 321 --~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~~ 352 (353)
T 2yrr_A 321 --RGQVLRLGLMGEGARREAYQAFLKALDRALAL 352 (353)
T ss_dssp --TTTCEEEECSGGGSCHHHHHHHHHHHHHHHHC
T ss_pred --CCCeEEEecCccCCHHHHHHHHHHHHHHHHhh
Confidence 3678999995 36899999 999999998763
No 103
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=100.00 E-value=3.1e-32 Score=242.63 Aligned_cols=282 Identities=16% Similarity=0.139 Sum_probs=213.3
Q ss_pred CCcEEEecCcHHHHHHHHHHhcCCCCeEEecC-CCCCC-hhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 17 PSQIVLTAGATPAVEILCFCLADHGNALLVPS-PYYPG-FDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~-p~~~~-~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
++++++++|+++++..++.++.++||+|++++ +.|+. +...+. ..|.+++.++++ .++.+|++++++++++.
T Consensus 56 ~~~v~~~~g~t~a~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~-~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~--- 129 (366)
T 1m32_A 56 YTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAYGARMVEMAG-LMGIAHHAYDCG--EVARPDVQAIDAILNAD--- 129 (366)
T ss_dssp EEEEEEESCHHHHHHHHHHHSCCTTCCEEEEESSHHHHHHHHHHH-HHTCCEEEEECC--TTSCCCHHHHHHHHHHC---
T ss_pred CcEEEEecChHHHHHHHHHHhcCCCCeEEEEeCCCccHHHHHHHH-HhCCceEEEeCC--CCCCCCHHHHHHHHhcC---
Confidence 35799999999999999999999999988776 55654 445555 779999999984 45579999999999861
Q ss_pred CCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEecccc
Q 019899 95 GVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSK 174 (334)
Q Consensus 95 ~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK 174 (334)
.+++++++++|+||||.++| +++|.++|++||+++|+|++|+.+.. ..++ .. .+.++++.|+||
T Consensus 130 -~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~----~~~~---~~-----~~~di~~~s~~K 193 (366)
T 1m32_A 130 -PTISHIAMVHSETTTGMLNP---IDEVGALAHRYGKTYIVDAMSSFGGI----PMDI---AA-----LHIDYLISSANK 193 (366)
T ss_dssp -TTCCEEEEESEETTTTEECC---HHHHHHHHHHHTCEEEEECTTTTTTS----CCCT---TT-----TTCSEEEEESSS
T ss_pred -CCeEEEEEecccCCcceecC---HHHHHHHHHHcCCEEEEECCccccCc----Cccc---cc-----cCccEEEecCcc
Confidence 24788999999999999999 89999999999999999999985332 1111 11 356788999999
Q ss_pred cCCCCCceEEEEeecCHHHHHHHHHhh------------------c--ccCCChHHHHHHHHhhCChHHHHHH--HHHHH
Q 019899 175 DLSLPGFRTGVIYSYNESVLAAAKKLT------------------R--FCSISAPTQRLLISMLSDTKFIQEY--LETNK 232 (334)
Q Consensus 175 ~~~~~g~r~g~i~~~~~~~~~~~~~~~------------------~--~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~ 232 (334)
+++ .+.++||+++ ++++.+.+.... . .++.+...+.++..+++.. .+. +.+.+
T Consensus 194 ~~~-~~~g~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~---~~~g~~~~~~ 268 (366)
T 1m32_A 194 CIQ-GVPGFAFVIA-REQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKEL---AKEGGVAARH 268 (366)
T ss_dssp TTC-CCSSEEEEEE-EHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHH---HHHTHHHHHH
T ss_pred ccc-CCCceEEEEE-CHHHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHH---HHccCHhHHH
Confidence 884 2345799998 677766553310 0 2456666666666666432 233 56778
Q ss_pred HHHHHHHHHHHHHHHhCCCcccCC---CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEE
Q 019899 233 RRIKKLYDSFVAGLKQLGIRCSES---SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRC 309 (334)
Q Consensus 233 ~~~~~~~~~~~~~l~~~g~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi 309 (334)
++++++++++.+.|++.|+++..+ ..++++|++++... ..+..++.+.|.+ +||.+.||..|+ ++++|+
T Consensus 269 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~-~gi~v~~~~~~~---~~~iRi 340 (366)
T 1m32_A 269 QRYQQNQRSLVAGMRALGFNTLLDDELHSPIITAFYSPEDP----QYRFSEFYRRLKE-QGFVIYPGKVSQ---SDCFRI 340 (366)
T ss_dssp HHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCCCT----TCCHHHHHHHHHH-TTEECEECCCSS---SCEEEE
T ss_pred HHHHHHHHHHHHHHHHCCCeeccCchhcCceEEEEEcCccC----CCCHHHHHHHHHH-CCEEEECCcCCC---CCEEEE
Confidence 889999999999999888876654 35778889887410 0134678888555 699999988763 679999
Q ss_pred EecC-CCcccHHHHHHHHHHHHHHc
Q 019899 310 CFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 310 ~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
+++. .+++++++++++|+++++++
T Consensus 341 ~~~~~~~~~~i~~~~~~l~~~~~~~ 365 (366)
T 1m32_A 341 GNIGEVYAADITALLTAIRTAMYWT 365 (366)
T ss_dssp ECCSSCCHHHHHHHHHHHHHHCTTC
T ss_pred ecCCCCCHHHHHHHHHHHHHHHHhc
Confidence 9986 48999999999999988764
No 104
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=100.00 E-value=8.7e-33 Score=247.75 Aligned_cols=290 Identities=17% Similarity=0.154 Sum_probs=214.5
Q ss_pred hhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc----CCCCeEEecCCCCCChhhhhhh--ccCcEEEEEeCCCCCCcccc
Q 019899 7 QVLGQAVSFDPSQIVLTAGATPAVEILCFCLA----DHGNALLVPSPYYPGFDRDIRF--RTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 7 ~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~----~~gd~vl~~~p~~~~~~~~~~~--~~g~~v~~v~~~~~~~~~~~ 80 (334)
+.+++.++++++++++|+|+++++.+++.++. ++||+|++++|+|+++...+.. ..|.+++.++++ .++.+|
T Consensus 50 ~~la~~~g~~~~~v~~~~g~t~a~~~~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d 127 (382)
T 4eb5_A 50 EKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVG--KYGEVD 127 (382)
T ss_dssp HHHHHHHTCTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBC--TTSCBC
T ss_pred HHHHHHhCCCCCeEEEcCchHHHHHHHHHHHHhhccCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccC--CCCccC
Confidence 33444445677899999999999999999997 8999999999999988776651 369999999984 356799
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++ ++++|++++|+||||.++| +++|.++|+++|++ |+|++|+. +....++..
T Consensus 128 ~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~-i~D~a~~~----g~~~~~~~~------ 187 (382)
T 4eb5_A 128 VSFIDQKLRD------DTILVSVQHANNEIGTIQP---VEEISEVLAGKAAL-HIDATASV----GQIEVDVEK------ 187 (382)
T ss_dssp HHHHHHHCCT------TEEEEECCSBCTTTCBBCC---HHHHHHHHTTSSEE-EEECTTTB----TTBCCCHHH------
T ss_pred HHHHHHHhcC------CCeEEEEeccCCCccccCC---HHHHHHHHHHCCCE-EEEcchhc----CCcccCccc------
Confidence 9999999875 7899999999999999999 88999999999999 99999984 211122221
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHH-HHHHHH-----HhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNES-VLAAAK-----KLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRR 234 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 234 (334)
.+.++++.|+||.+|++| +|+++++++. +...+. .....++.+...+.++..++.. +.+.+.+++++
T Consensus 188 --~~~di~~~s~sK~~g~~g--~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~---~~~~~~~~~~~ 260 (382)
T 4eb5_A 188 --IGADMLTISSNDIYGPKG--VGALWIRKEAKLQPVILGGGQENGLRSGSENVPSIVGFGKAAEI---TAMEWREEAER 260 (382)
T ss_dssp --HTCSEEEEETGGGTCCSS--CEEEEEETTCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred --cCCCEEEeehHHhcCCCc--eEEEEEccccccCceecCCCccccccCCCccHHHHHHHHHHHHH---HHHhHHHHHHH
Confidence 245688899999887656 6888885442 211110 0111234455555555555532 23456778888
Q ss_pred HHHHHHHHHHHHHhC-CCcccCCCc---eeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC--------
Q 019899 235 IKKLYDSFVAGLKQL-GIRCSESSA---GLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI-------- 302 (334)
Q Consensus 235 ~~~~~~~~~~~l~~~-g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~-------- 302 (334)
++++++++.+.|+++ ++++..+.+ +.++++.++.. +..++.+.|. ++||.+.+|..|...
T Consensus 261 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~-~~gi~v~~g~~~~~~~~~~~~~~ 332 (382)
T 4eb5_A 261 LRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSYI-------EGESIVLSLD-MAGIQASTGSACSSKTLQPSHVL 332 (382)
T ss_dssp HHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETTS-------CHHHHHHHHH-HHTCBCBCCCGGGTSSCCCCHHH
T ss_pred HHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEEeCCc-------CHHHHHHHHH-HCCEEEeccccccCCCCcccHHH
Confidence 999999999999887 777665542 44566777631 3457788754 589999999875432
Q ss_pred ---------CCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 303 ---------EPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 303 ---------~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
.++++|++++. .+++++++++++|++++++.
T Consensus 333 ~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 373 (382)
T 4eb5_A 333 MACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERL 373 (382)
T ss_dssp HHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 25799999985 58999999999999998764
No 105
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=100.00 E-value=6.8e-33 Score=248.21 Aligned_cols=289 Identities=17% Similarity=0.175 Sum_probs=212.3
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc----CCCCeEEecCCCCCChhhhhhh--ccCcEEEEEeCCCCCCcc
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLA----DHGNALLVPSPYYPGFDRDIRF--RTGVELIPVHCRSTDNFA 78 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~----~~gd~vl~~~p~~~~~~~~~~~--~~g~~v~~v~~~~~~~~~ 78 (334)
+++.+++.++++++++++++|+++++..++.++. ++||+|+++.++|+++...+.. ..|.+++.++++ .++.
T Consensus 48 ~~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~ 125 (382)
T 4hvk_A 48 AREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVG--KYGE 125 (382)
T ss_dssp HHHHHHHHTTCTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBC--TTSC
T ss_pred HHHHHHHHcCCCcCeEEEECCchHHHHHHHHHhhhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccC--CCCC
Confidence 3444455566778899999999999999999987 8999999999999998876651 259999999984 4557
Q ss_pred ccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhc
Q 019899 79 FSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEA 158 (334)
Q Consensus 79 ~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~ 158 (334)
+|++++++++++ +++++++++|+||||.+.| +++|.++|+++|+ +|+|++|+... ...+...
T Consensus 126 ~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~-li~D~a~~~~~----~~~~~~~---- 187 (382)
T 4hvk_A 126 VDVSFIDQKLRD------DTILVSVQHANNEIGTIQP---VEEISEVLAGKAA-LHIDATASVGQ----IEVDVEK---- 187 (382)
T ss_dssp BCHHHHHHHCCT------TEEEEECCSBCTTTCBBCC---HHHHHHHHSSSSE-EEEECTTTBTT----BCCCHHH----
T ss_pred cCHHHHHHHhcc------CceEEEEECCCCCceeeCC---HHHHHHHHHHcCE-EEEEhHHhcCC----CCCCchh----
Confidence 999999999975 7899999999999999999 8899999999999 99999987422 1122221
Q ss_pred cccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh---------cccCCChHHHHHHHHhhCChHHHHHHHH
Q 019899 159 EEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT---------RFCSISAPTQRLLISMLSDTKFIQEYLE 229 (334)
Q Consensus 159 ~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 229 (334)
.+.++++.|+||.+|++| +|+++++++. .+.... ..++.+...+.++..++. +..+++.
T Consensus 188 ----~~~d~~~~s~~K~~g~~g--~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~---~~~~~~~ 255 (382)
T 4hvk_A 188 ----IGADMLTISSNDIYGPKG--VGALWIRKEA---KLQPVILGGGQENGLRSGSENVPSIVGFGKAAE---ITAMEWR 255 (382)
T ss_dssp ----HTCSEEEEESGGGTSCTT--CEEEEEETTC---CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHH---HHHHHHH
T ss_pred ----cCCCEEEEeHHHhcCCCc--eEEEEEcCcc---CcCcccccCCCcCccccCCcCHHHHHHHHHHHH---HHHhhHH
Confidence 345688999999887666 5666663332 111111 123345566666656554 2345678
Q ss_pred HHHHHHHHHHHHHHHHHHhC-CCcccCCCc---eeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCC--
Q 019899 230 TNKRRIKKLYDSFVAGLKQL-GIRCSESSA---GLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIE-- 303 (334)
Q Consensus 230 ~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~-- 303 (334)
+..++++++++++.+.|+++ ++++..+.+ +.++++.++.. +..++.+. ++++||.+.+|..|+...
T Consensus 256 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~-l~~~gi~v~~g~~~~~~~~~ 327 (382)
T 4hvk_A 256 EEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSYI-------EGESIVLS-LDMAGIQASTGSACSSKTLQ 327 (382)
T ss_dssp HHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETTC-------CHHHHHHH-HHHTTCBCBCC--------C
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEECCC-------CHHHHHHH-HHHCCEEEeeCCccCCCCCc
Confidence 88899999999999999987 777665543 23455666532 34567777 555899999998776532
Q ss_pred ---------------CCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 304 ---------------PGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 304 ---------------~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
++++|++++. .++++++++++.|++++++.
T Consensus 328 ~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~~~ 373 (382)
T 4hvk_A 328 PSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERL 373 (382)
T ss_dssp CCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 5789999985 58999999999999998764
No 106
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=100.00 E-value=2.3e-32 Score=246.84 Aligned_cols=297 Identities=13% Similarity=0.065 Sum_probs=215.5
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLA--DHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSIT 82 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~ 82 (334)
+++.+++.++. +++|++++|++ ++..++..+. .+||+|+++.|+|+++...++ ..|.+++.++.+ |++
T Consensus 96 l~~~la~~~~~-~~~i~~~sG~~-a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~~-~~g~~~~~v~~~-------d~~ 165 (401)
T 2bwn_A 96 LEAEIAGLHQK-EAALVFSSAYN-ANDATLSTLRVLFPGLIIYSDSLNHASMIEGIK-RNAGPKRIFRHN-------DVA 165 (401)
T ss_dssp HHHHHHHHTTC-SEEEEESCHHH-HHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHH-HSCCCEEEECTT-------CHH
T ss_pred HHHHHHHHhCC-CcEEEECCcHH-HHHHHHHHHhcCCCCCEEEECchhhHHHHHHHH-HcCCeEEEEcCC-------CHH
Confidence 34444444443 46788877666 7777766653 589999999999999999988 889999999852 688
Q ss_pred HHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccC
Q 019899 83 ALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVD 162 (334)
Q Consensus 83 ~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (334)
+++++++... ..++++|++++|+||||.+.| +++|.++|+++|+++|+|++|+.+.++... ..+..... ..
T Consensus 166 ~le~~l~~~~--~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~g-~~~~~~~~---~~ 236 (401)
T 2bwn_A 166 HLRELIAADD--PAAPKLIAFESVYSMDGDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPRG-AGVAERDG---LM 236 (401)
T ss_dssp HHHHHHHHSC--TTSCEEEEEESBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTTS-CCHHHHHT---CG
T ss_pred HHHHHHHhhc--cCCceEEEEecCcCCCCCcCC---HHHHHHHHHHcCCEEEEeccccccccCCCC-ceeeeccC---cc
Confidence 9998887421 026899999999999999999 899999999999999999999965553221 11111111 11
Q ss_pred CCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc----cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH
Q 019899 163 KDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF----CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL 238 (334)
Q Consensus 163 ~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 238 (334)
.+.+++++|+||+++++| ||+++ ++++.+.++..... .+.++..+.++..+++..+ ...+.+.+++++++
T Consensus 237 ~~~~i~~~s~sK~~~~~G---G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~ 310 (401)
T 2bwn_A 237 HRIDIFNGTLAKAYGVFG---GYIAA-SARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLK--TAEGQKLRDAQQMH 310 (401)
T ss_dssp GGCSEEEEESSSTTCSCC---EEEEE-CHHHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHT--SHHHHHHHHHHHHH
T ss_pred ccCcEEEeechhhccCCC---CEEec-CHHHHHHHHHhCcCceecCCCCHHHHHHHHHHHHHHH--hcccHHHHHHHHHH
Confidence 234688899999999777 99998 78888887653221 2234566655555553211 11235677888899
Q ss_pred HHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC-CCCeEEEEecC-CCc
Q 019899 239 YDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI-EPGWFRCCFTS-LTH 316 (334)
Q Consensus 239 ~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~-~~~~iRi~~~~-~~~ 316 (334)
++++.+.|++.|+++..+.++ ++|+.++.. .+..++...|++++||.+.|+..++.. ..+++|++++. .++
T Consensus 311 ~~~l~~~L~~~g~~~~~~~~~-~~~~~~~~~------~~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~t~ 383 (401)
T 2bwn_A 311 AKVLKMRLKALGMPIIDHGSH-IVPVVIGDP------VHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDL 383 (401)
T ss_dssp HHHHHHHHHHHTCCBCCCSSS-CEEEECCCH------HHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCH
T ss_pred HHHHHHHHHHCCCcccCCCCC-eEEEEeCCh------HHHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCCCH
Confidence 999999998888887777665 677887642 245678888766789999998876543 23689999985 589
Q ss_pred ccHHHHHHHHHHHHHHc
Q 019899 317 EDIPLVIERIQKVAETC 333 (334)
Q Consensus 317 ~~l~~~l~~l~~~~~~~ 333 (334)
+++++++++|+++++++
T Consensus 384 ~~i~~~~~~l~~~~~~~ 400 (401)
T 2bwn_A 384 KQIDGLVHAMDLLWARC 400 (401)
T ss_dssp HHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999987654
No 107
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=100.00 E-value=7.8e-32 Score=243.24 Aligned_cols=274 Identities=14% Similarity=0.132 Sum_probs=203.0
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhh----hhhhccCcEEEEEeCCCCCCcccc
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDR----DIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
+++.+++.++. +++++++|+++++..++.+++++||+|+++.|+|+++.. .++ ..|.+++.++.. |
T Consensus 67 l~~~ia~~~g~--~~~i~~~~g~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~-~~g~~~~~v~~~-------d 136 (404)
T 1e5e_A 67 LEGKIAFLEKT--EACVATSSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHALT-KFGIQVDFINTA-------I 136 (404)
T ss_dssp HHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHH-HTTCEEEEECTT-------S
T ss_pred HHHHHHHHhCC--CcEEEeCChHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHH-HcCCEEEEECCC-------C
Confidence 33444433333 478888888999999999999999999999999999888 566 789999999862 7
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHh-cCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFARE-KNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~-~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
++++++++++ ++++|++++|+||||.+++ +++|.++|++ +|+++|+|++|+.+.+. .++ .
T Consensus 137 ~~~l~~~i~~------~t~~v~l~~p~NptG~v~~---l~~i~~la~~~~~~~li~De~~~~~~~~----~~~----~-- 197 (404)
T 1e5e_A 137 PGEVKKHMKP------NTKIVYFETPANPTLKIID---MERVCKDAHSQEGVLVIADNTFCSPMIT----NPV----D-- 197 (404)
T ss_dssp TTHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHTSTTCEEEEECTTTCTTTC----CGG----G--
T ss_pred HHHHHHhcCC------CCcEEEEECCCCCCCcccC---HHHHHHHHHhhcCCEEEEECCCchhhhC----Ccc----c--
Confidence 8899988875 7999999999999999998 9999999999 99999999999986653 111 1
Q ss_pred ccCCCcEEEEecccccCCCCCceE-EEEeecCHHHHH-HHHHhhccc---CCChHHHHHHHHhhCChHHHHHHHHHHHHH
Q 019899 160 EVDKDRVHIIYGLSKDLSLPGFRT-GVIYSYNESVLA-AAKKLTRFC---SISAPTQRLLISMLSDTKFIQEYLETNKRR 234 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~g~r~-g~i~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 234 (334)
.+.++++.|+||+++++|.|+ ||+++ ++++++ .+......+ +.++..+.++...++... .+.++
T Consensus 198 ---~~~di~~~S~sK~~~~~g~ri~G~~~~-~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~l~~~~-------~~~~~ 266 (404)
T 1e5e_A 198 ---FGVDVVVHSATKYINGHTDVVAGLICG-KADLLQQIRMVGIKDITGSVISPHDAWLITRGLSTLN-------IRMKA 266 (404)
T ss_dssp ---GTCSEEEEETTTTTTCSSCCCCEEEEE-CHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTTHH-------HHHHH
T ss_pred ---cCCEEEEEcCccccCCCCCCeEEEEEE-CHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhHhHHH-------HHHHH
Confidence 367889999999999899998 99998 677766 777665443 467778888777776532 22233
Q ss_pred HHHHHHHHHHHHHhCC---------------CcccCC----CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcC
Q 019899 235 IKKLYDSFVAGLKQLG---------------IRCSES----SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTP 295 (334)
Q Consensus 235 ~~~~~~~~~~~l~~~g---------------~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~ 295 (334)
..++.+.+.+.+++.. +++..+ .++++.| +++.. .+....++++.|| +.+
T Consensus 267 ~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~-~~~~~---------~~~~~~~l~~~~i-~~~ 335 (404)
T 1e5e_A 267 ESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITF-ILKSG---------FEGAKKLLDNLKL-ITL 335 (404)
T ss_dssp HHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEE-EETTH---------HHHHHHHHHTCSS-SEE
T ss_pred HHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEE-EeCCC---------HHHHHHHHHhCCC-cee
Confidence 3444555555555432 122222 2677766 77531 2344556888898 545
Q ss_pred CCCcCC-----------------------C--CCCeEEEEecCCCcccHHHHHHHHHHHHHH
Q 019899 296 GSACHC-----------------------I--EPGWFRCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 296 g~~~~~-----------------------~--~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
|..||. . .++++|+|++ . ++++++++.|++++++
T Consensus 336 ~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g-~--e~~~~li~~l~~al~~ 394 (404)
T 1e5e_A 336 AVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVG-I--EDADELIADFKQGLDA 394 (404)
T ss_dssp SSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECC-S--SCHHHHHHHHHHHHHH
T ss_pred ccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeC-C--CCHHHHHHHHHHHHHH
Confidence 554442 1 1579999999 3 8999999999988765
No 108
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3e-32 Score=246.43 Aligned_cols=288 Identities=10% Similarity=0.109 Sum_probs=213.8
Q ss_pred hhhhcCCCCCCCCcEEEecCcHHHHHHHHHHh---cCCCCeEEecCCCCCChhhhhhh---ccCcEEEEEeCCCCCCccc
Q 019899 6 SQVLGQAVSFDPSQIVLTAGATPAVEILCFCL---ADHGNALLVPSPYYPGFDRDIRF---RTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 6 ~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l---~~~gd~vl~~~p~~~~~~~~~~~---~~g~~v~~v~~~~~~~~~~ 79 (334)
++.+++.+++++++|++|+|+++++.+++.++ +++||+|+++.|+|+++...+.. ..|.+++.+++++ +++.+
T Consensus 75 ~~~la~~~g~~~~~v~~~~g~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~-~~~~~ 153 (406)
T 3cai_A 75 REAVADLVNADPGGVVLGADRAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDI-ETGEL 153 (406)
T ss_dssp HHHHHHHHTCCGGGEEEESCHHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCT-TTCCC
T ss_pred HHHHHHHhCCCCCeEEEeCChHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCc-ccCCc
Confidence 33444445567789999999999999999987 78999999999999988776651 1699999999853 34578
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
|+++|++++++ ++++|++++|+||||.++| +++|.++|+++|+++|+|++|+.. .....+..
T Consensus 154 d~~~l~~~l~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g----~~~~~~~~----- 215 (406)
T 3cai_A 154 PTWQWESLISK------STRLVAVNSASGTLGGVTD---LRAMTKLVHDVGALVVVDHSAAAP----YRLLDIRE----- 215 (406)
T ss_dssp CGGGHHHHCCT------TEEEEEEESBCTTTCBBCC---CHHHHHHHHHTTCEEEEECTTTTT----TCCCCHHH-----
T ss_pred CHHHHHHHhCC------CceEEEEeCCcCCccccCC---HHHHHHHHHHcCCEEEEEcccccC----CCCCCchh-----
Confidence 99999999875 7899999999999999999 889999999999999999999742 11122221
Q ss_pred ccCCCcEEEEecccccCCCCCceEE-EEeecCHHHHHHHHHhhc-----------ccCCChHHHHHHHHhhCChH-----
Q 019899 160 EVDKDRVHIIYGLSKDLSLPGFRTG-VIYSYNESVLAAAKKLTR-----------FCSISAPTQRLLISMLSDTK----- 222 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~g~r~g-~i~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~l~~~~----- 222 (334)
.+.++++.|+||.+| ++ +| |+++ ++++.+.++.... .++.+...+.++..+++..+
T Consensus 216 ---~~~d~~~~s~~K~~g-~~--~G~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~ 288 (406)
T 3cai_A 216 ---TDADVVTVNAHAWGG-PP--IGAMVFR-DPSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDES 288 (406)
T ss_dssp ---HCCSEEEEEGGGGTS-CS--CEEEEES-CHHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTT
T ss_pred ---cCCCEEEeehhhhcC-CC--cCeEEEE-ehHHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccc
Confidence 345688899999876 54 88 9998 7777776654321 23445555545444442211
Q ss_pred -------HHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCC---ceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCe
Q 019899 223 -------FIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSESS---AGLYCWADMSGLIPSYSEKGELELWDKLLNIAKI 291 (334)
Q Consensus 223 -------~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi 291 (334)
.+++++.+.+++++++++++.+.|++. ++++..+. ++ ++++.++.. +..++...| .++||
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~-~~~~~~~~~-------~~~~~~~~L-~~~gi 359 (406)
T 3cai_A 289 ARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIP-VVSFAVHKV-------PADRVVQRL-ADNGI 359 (406)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECCCCSSBCS-EEEEEETTB-------CHHHHHHHH-HHTTE
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCccccCC-EEEEEECCc-------CHHHHHHHH-HHCCc
Confidence 012256778888999999999999987 77766553 44 567777631 345777775 55899
Q ss_pred EEcCCC------CcCCC-CCCeEEEEecC-CCcccHHHHHHHHHH
Q 019899 292 NVTPGS------ACHCI-EPGWFRCCFTS-LTHEDIPLVIERIQK 328 (334)
Q Consensus 292 ~v~~g~------~~~~~-~~~~iRi~~~~-~~~~~l~~~l~~l~~ 328 (334)
.+.+|. .++.. ..+++|++++. .+++++++++++|++
T Consensus 360 ~v~~g~~~~~~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~ 404 (406)
T 3cai_A 360 LAIANTGSRVLDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALAS 404 (406)
T ss_dssp ECEECCSCHHHHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHT
T ss_pred EEecCChHHHHHHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHH
Confidence 999887 33332 24789999985 488999999999875
No 109
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=100.00 E-value=5.5e-32 Score=246.26 Aligned_cols=284 Identities=16% Similarity=0.214 Sum_probs=217.3
Q ss_pred CcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 18 SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
++.++++++++++..++.+++++||.|+++.|+|.++...++ ..|.+++.++. +|+++|++++++... .+
T Consensus 125 ~~~i~~~sGs~a~~~al~~l~~~gd~vl~~~~~h~~~~~~~~-~~g~~~~~~~~-------~d~~~le~~l~~~~~--~~ 194 (427)
T 2w8t_A 125 TGAIVFSTGYMANLGIISTLAGKGEYVILDADSHASIYDGCQ-QGNAEIVRFRH-------NSVEDLDKRLGRLPK--EP 194 (427)
T ss_dssp SEEEEESCHHHHHHHHHHHHSCTTCEEEEETTCCHHHHHHHH-HSCSEEEEECT-------TCHHHHHHHHHTSCS--SS
T ss_pred CceEEecCcHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHH-HcCCeeEEeCC-------CCHHHHHHHHHhccC--CC
Confidence 366777777889999999999999999999999999999998 88999998873 589999999875210 16
Q ss_pred eeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEecccccCC
Q 019899 98 VRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLS 177 (334)
Q Consensus 98 ~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~ 177 (334)
+++|++++++||||.+.+ +++|.++|++||+++|+||+|+.+.++... .+..... ++.++.++++.|+||.+|
T Consensus 195 ~~~v~~~~~~n~tG~~~~---l~~l~~l~~~~g~~li~Dea~~~~~~~~~g-~~~~~~~---~~~~~~di~~~s~sK~~g 267 (427)
T 2w8t_A 195 AKLVVLEGVYSMLGDIAP---LKEMVAVAKKHGAMVLVDEAHSMGFFGPNG-RGVYEAQ---GLEGQIDFVVGTFSKSVG 267 (427)
T ss_dssp CEEEEEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTS-CCHHHHT---TCTTCCSEEEEESSSTTC
T ss_pred CeEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCC-CchHhhc---CCCcCCcEEEecchhhhc
Confidence 889999999999999999 999999999999999999999998775221 1222211 122466899999999998
Q ss_pred CCCceEEEEeecCHHHHHHHHHhh----cccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcc
Q 019899 178 LPGFRTGVIYSYNESVLAAAKKLT----RFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRC 253 (334)
Q Consensus 178 ~~g~r~g~i~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 253 (334)
++| ||+++ ++++++.+.... ..++.++..+.++...++.. + ...+++++++++++++.+.|++.|+++
T Consensus 268 ~~g---G~v~~-~~~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~---~-~~~~~~~~~~~~~~~l~~~L~~~g~~~ 339 (427)
T 2w8t_A 268 TVG---GFVVS-NHPKFEAVRLACRPYIFTASLPPSVVATATTSIRKL---M-TAHEKRERLWSNARALHGGLKAMGFRL 339 (427)
T ss_dssp SCC---EEEEE-CCTTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHH---T-SCHHHHHHHHHHHHHHHHHHHHHTCEE
T ss_pred cCC---CEEEe-CHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHH---h-cCHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 776 99998 677777775542 12345666555555555432 1 135677888899999999998888887
Q ss_pred c-CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC-CCCeEEEEecC-CCcccHHHHHHHHHHHH
Q 019899 254 S-ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI-EPGWFRCCFTS-LTHEDIPLVIERIQKVA 330 (334)
Q Consensus 254 ~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~-~~~~iRi~~~~-~~~~~l~~~l~~l~~~~ 330 (334)
. .+..+.++|+.++.. .+..++...|++ +||.+.|+..++.. ..+++|++++. .+++++++++++|++++
T Consensus 340 ~~~~~~~~~~~~~~~~~------~~~~~l~~~L~~-~Gi~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l 412 (427)
T 2w8t_A 340 GTETCDSAIVAVMLEDQ------EQAAMMWQALLD-GGLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAG 412 (427)
T ss_dssp SCSSCCSSEEEEEESSH------HHHHHHHHHHHH-TTEECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCEEEEEECCH------HHHHHHHHHHHH-CCeEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 6 341456788888642 245678888665 69999998876543 24689999985 59999999999999998
Q ss_pred HHc
Q 019899 331 ETC 333 (334)
Q Consensus 331 ~~~ 333 (334)
++.
T Consensus 413 ~~~ 415 (427)
T 2w8t_A 413 RAV 415 (427)
T ss_dssp HHH
T ss_pred HHh
Confidence 764
No 110
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=100.00 E-value=1.2e-31 Score=240.58 Aligned_cols=292 Identities=12% Similarity=0.086 Sum_probs=216.8
Q ss_pred hhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc---CCCCeEEec-CCCCCChh-hhhhhccCcEEEEEeCCCCCCc
Q 019899 3 GFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLA---DHGNALLVP-SPYYPGFD-RDIRFRTGVELIPVHCRSTDNF 77 (334)
Q Consensus 3 ~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~---~~gd~vl~~-~p~~~~~~-~~~~~~~g~~v~~v~~~~~~~~ 77 (334)
+.+++.++...+++++++++|+|+++++..++.++. ++||+|+++ .|.|..+. ..++ ..|.+++.+++. +.++
T Consensus 45 ~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~~~~gd~vlv~~~~~~~~~~~~~~~-~~g~~~~~v~~~-~~~~ 122 (385)
T 2bkw_A 45 KNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKAPNKNVLVVSTGTFSDRFADCLR-SYGAQVDVVRPL-KIGE 122 (385)
T ss_dssp HHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTCSCCEEEEECSSHHHHHHHHHHH-HTTCEEEEECCS-STTS
T ss_pred HHHHHHhCCCCCCCCceEEEcCchHHHHHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHH-HcCCceEEEecC-CCCC
Confidence 456666665556677899999999999999999997 899999888 55665553 5566 789999999973 2345
Q ss_pred cccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc--CcEEEEeccccccccCCCCcchhhhh
Q 019899 78 AFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK--NIHVISDEIYGGSIFGNEEFVSMAEI 155 (334)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~--~~~vi~D~~~~~~~~~~~~~~~~~~~ 155 (334)
.+|++++++++++ .++++|++++|+||||.+.| +++|.++|+++ |+++|+|++|+... ...++
T Consensus 123 ~~d~~~l~~~l~~-----~~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~~~li~D~a~~~~~----~~~~~--- 187 (385)
T 2bkw_A 123 SVPLELITEKLSQ-----NSYGAVTVTHVDTSTAVLSD---LKAISQAIKQTSPETFFVVDAVCSIGC----EEFEF--- 187 (385)
T ss_dssp CCCHHHHHHHHHH-----SCCSEEEEESEETTTTEECC---HHHHHHHHHHHCTTSEEEEECTTTTTT----SCCCT---
T ss_pred CCCHHHHHHHHhc-----CCCCEEEEEccCCCcCeEcC---HHHHHHHHHhhCCCCEEEEECccccCC----ccccc---
Confidence 7899999999976 26899999999999999999 88999999999 99999999997422 11121
Q ss_pred hhccccCCCcEEEEecccccCC-CCCceEEEEeecCHHHHH-HHH----------------------Hhhc-----ccCC
Q 019899 156 LEAEEVDKDRVHIIYGLSKDLS-LPGFRTGVIYSYNESVLA-AAK----------------------KLTR-----FCSI 206 (334)
Q Consensus 156 ~~~~~~~~~~~~~~~s~sK~~~-~~g~r~g~i~~~~~~~~~-~~~----------------------~~~~-----~~~~ 206 (334)
.. .+.++++.|+||+++ ++| +||+++ ++++.+ .++ .... .++.
T Consensus 188 ~~-----~~~d~~~~s~~K~~~~~~G--~G~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (385)
T 2bkw_A 188 DE-----WGVDFALTASQKAIGAPAG--LSISLC-SSRFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATP 259 (385)
T ss_dssp TT-----TTCSEEEEESSSTTCCCSC--EEEEEE-CHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCC
T ss_pred cc-----cCceEEEecCccccccCCc--ceEEEE-cHHHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCC
Confidence 11 355688899999774 456 599998 666655 431 1111 1345
Q ss_pred ChHHHHHHHHhhCChHHHHHH-HHHHHHHHHHHHHHHHHHH-HhCCCcccCCC-----ceeEEeeecCCcCCCCChhhHH
Q 019899 207 SAPTQRLLISMLSDTKFIQEY-LETNKRRIKKLYDSFVAGL-KQLGIRCSESS-----AGLYCWADMSGLIPSYSEKGEL 279 (334)
Q Consensus 207 ~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~ 279 (334)
+...+.++..+++. +.+. +.+.+++++++++++.+.| ++.|+++..+. .+.++|+.++. ..
T Consensus 260 ~~~~~~a~~~al~~---~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~---------~~ 327 (385)
T 2bkw_A 260 PVQLINSLDVALKE---ILEEGLHKRWDLHREMSDWFKDSLVNGLQLTSVSRYPSNMSAHGLTAVYVAD---------PP 327 (385)
T ss_dssp CHHHHHHHHHHHHH---HHHHCHHHHHHHHHHHHHHHHHHHHTTTCCEESSCSSSTTBCSSCEEEECSC---------HH
T ss_pred CHHHHHHHHHHHHH---HHHccHHHHHHHHHHHHHHHHHHHHHhcCceecccCcccccCCceEEEecCC---------HH
Confidence 66666666666543 2222 5677888899999999999 88788776432 46677888763 35
Q ss_pred HHHHHHHHhcCeEEcCCCCcCCCCCCeEEEE-ec----CCCcccHHHHHHHHHHHHHHc
Q 019899 280 ELWDKLLNIAKINVTPGSACHCIEPGWFRCC-FT----SLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 280 ~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~-~~----~~~~~~l~~~l~~l~~~~~~~ 333 (334)
++.+.| .++||.+.+|..+.. .++++|++ ++ ..+++++++++++|+++++++
T Consensus 328 ~~~~~l-~~~gi~v~~g~~~~~-~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~~ 384 (385)
T 2bkw_A 328 DVIAFL-KSHGVVIAGGIHKDI-GPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQRK 384 (385)
T ss_dssp HHHHHH-HHTTEECBCCCCTTT-GGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC-
T ss_pred HHHHHH-HHCCeEEeCCCCccc-CCCEEEEEccccccccCCHHHHHHHHHHHHHHHHhc
Confidence 778885 458999999876432 35789999 66 259999999999999988764
No 111
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=100.00 E-value=8.3e-32 Score=243.80 Aligned_cols=276 Identities=14% Similarity=0.140 Sum_probs=210.3
Q ss_pred cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCce
Q 019899 19 QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKV 98 (334)
Q Consensus 19 ~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 98 (334)
..++++++++++..++.+++++||.|+++.|+|+++...+. ..|.+++.++. .|++++++++++. ++
T Consensus 121 ~~i~~~sGt~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~-~~g~~~~~~~~-------~d~~~le~~l~~~-----~~ 187 (409)
T 3kki_A 121 ECLLSQSGWNANVGLLQTICQPNTNVYIDFFAHMSLWEGAR-YANAQAHPFMH-------NNCDHLRMLIQRH-----GP 187 (409)
T ss_dssp EEEEESCHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHH-HTTCEEEEECT-------TCHHHHHHHHHHH-----CS
T ss_pred eEEEecchHHHHHHHHHHhcCCCCEEEECCCcCHHHHHHHH-HcCCeEEEecC-------CCHHHHHHHHHhc-----CC
Confidence 45666677899999999999999999999999999999988 88999988873 5899999999874 57
Q ss_pred eEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccC--CCCcchhhhhhhccccCCCcEEEEecccccC
Q 019899 99 RGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFG--NEEFVSMAEILEAEEVDKDRVHIIYGLSKDL 176 (334)
Q Consensus 99 ~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~ 176 (334)
++|++++|+||||.+.+ +++|.++|++||++||+||+|+.+.++ +........+ ..+.++++.|+||++
T Consensus 188 ~~vi~~~~~nptG~~~~---l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~------~~~~di~~~s~sK~~ 258 (409)
T 3kki_A 188 GIIVVDSIYSTLGTIAP---LAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGL------TREVHFMTASLAKTF 258 (409)
T ss_dssp CEEEEESBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTC------GGGCSEEEEESSSTT
T ss_pred eEEEECCCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCC------CCCCCEEEeecchhh
Confidence 99999999999999999 999999999999999999999886553 2222222211 134568889999999
Q ss_pred CCCCceEEEEeecCHHHHHHHHHhhcc----cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Q 019899 177 SLPGFRTGVIYSYNESVLAAAKKLTRF----CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIR 252 (334)
Q Consensus 177 ~~~g~r~g~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 252 (334)
+++| ||+++ ++++.+.+...... .+.++....++...++. .++. .+++++++++++++.+.|++.+++
T Consensus 259 ~~~g---g~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~---~~~~-~~~~~~~~~~~~~l~~~L~~~g~~ 330 (409)
T 3kki_A 259 AYRA---GAIWC-NNEVNRCVPFISYPAIFSSTLLPYEAAGLETTLEI---IESA-DNRRQHLDRMARKLRIGLSQLGLT 330 (409)
T ss_dssp CSSC---EEEEE-SSSGGGTHHHHCHHHHHSBCCCHHHHHHHHHHHHH---HHHC-HHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred CCCc---eEEEE-CHHHHHHHHHhCcCccccCCCcHHHHHHHHHHHHH---HhcC-HHHHHHHHHHHHHHHHHHHHcCCc
Confidence 8553 99998 66777766653221 23445555555555432 2222 567788999999999999998887
Q ss_pred ccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcC-CCCCCeEEEEecC-CCcccHHHHHHHHHHHH
Q 019899 253 CSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACH-CIEPGWFRCCFTS-LTHEDIPLVIERIQKVA 330 (334)
Q Consensus 253 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~-~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~ 330 (334)
+. ..+.++|+.++.. .+..++...|++ +||.+.|...+. ...++++|++++. .+++++++++++|++++
T Consensus 331 ~~--~~~~~~~~~~~~~------~~~~~~~~~L~~-~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l 401 (409)
T 3kki_A 331 IR--SESQIIGLETGDE------RNTEKVRDYLES-NGVFGSVFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAV 401 (409)
T ss_dssp CC--CSSSEEEEEEESH------HHHHHHHHHHHH-TTEECEEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred cC--CCCCEEEEEeCCH------HHHHHHHHHHHH-CCceEeeeCCCCcCCCCcEEEEEccCCCCHHHHHHHHHHHHHHH
Confidence 65 3667788887653 234568888666 599998755432 2245799999985 58999999999999998
Q ss_pred HHc
Q 019899 331 ETC 333 (334)
Q Consensus 331 ~~~ 333 (334)
++.
T Consensus 402 ~~~ 404 (409)
T 3kki_A 402 NYG 404 (409)
T ss_dssp HHS
T ss_pred hcC
Confidence 763
No 112
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=100.00 E-value=6.3e-32 Score=241.79 Aligned_cols=289 Identities=16% Similarity=0.158 Sum_probs=208.1
Q ss_pred hhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChh--hhhhhccCcEEEEEeCCCCCCcccc
Q 019899 3 GFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFD--RDIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 3 ~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~--~~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
+++.+.++ .+.+.+.+++++|+++++..++.+++++||+|++++|.|++.. ..+. ..|.+++.++.+ .++.+|
T Consensus 59 ~~la~~~g--~~~~~~~i~~~~ggt~al~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~-~~g~~~~~v~~~--~~~~~d 133 (376)
T 3f0h_A 59 KFMLEYAK--APEGSKAVFMTCSSTGSMEAVVMNCFTKKDKVLVIDGGSFGHRFVQLCE-IHEIPYVALKLE--HGKKLT 133 (376)
T ss_dssp HHHHHHHT--CCTTCEEEEESSCHHHHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHH-HTTCCEEEEECC--TTCCCC
T ss_pred HHHHHHhC--CCCCceEEEEcCChhHHHHHHHHhccCCCCeEEEEeCChhhHHHHHHHH-HcCCceEEEeCC--CCCCCC
Confidence 44555444 2212234555889999999999999999999999998776644 2344 679999999973 557899
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++ +++++++++|+||||.++| +++|.++|+++|+++|+|++|+.+... ..+..
T Consensus 134 ~~~l~~~~~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~----~~~~~------ 194 (376)
T 3f0h_A 134 KEKLYEYDNQ------NFTGLLVNVDETSTAVLYD---TMMIGEFCKKNNMFFVCDCVSAFLADP----FNMNE------ 194 (376)
T ss_dssp HHHHHTTTTS------CCCEEEEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSC----CCHHH------
T ss_pred HHHHHHhhcc------CceEEEEecccCCcceecC---HHHHHHHHHHcCCEEEEEcCccccCcc----ccccc------
Confidence 9999987754 7899999999999999999 999999999999999999998864321 12211
Q ss_pred cCCCcEEEEecccccCC-CCCceEEEEeecCHHHHHHHHHhhc-------------------ccCCChHHHHHHHHhhCC
Q 019899 161 VDKDRVHIIYGLSKDLS-LPGFRTGVIYSYNESVLAAAKKLTR-------------------FCSISAPTQRLLISMLSD 220 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~-~~g~r~g~i~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~l~~ 220 (334)
.+.++++.|+||+++ ++| +|++++ ++++.+.+..... .++.+.....++...+..
T Consensus 195 --~~~d~~~~s~~K~l~~~~G--~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~ 269 (376)
T 3f0h_A 195 --CGADVMITGSQKVLACPPG--ISVIVL-APRGVERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKE 269 (376)
T ss_dssp --HTCSEEEEETTTTTCCCSS--CEEEEE-CHHHHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHH
T ss_pred --cCccEEEecCcccccCCCc--eEEEEE-CHHHHHHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHH
Confidence 345688899999997 555 677887 8888887764211 122333333444444322
Q ss_pred hHHHHH--HHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcee-EEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCC
Q 019899 221 TKFIQE--YLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGL-YCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGS 297 (334)
Q Consensus 221 ~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~ 297 (334)
+.+ .+.+.+++..++++++.+.|++.++++..+.... ++.+. +.. .+..++...|.++.||.+.||.
T Consensus 270 ---~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~-~~~------~~~~~l~~~l~~~~gi~v~~g~ 339 (376)
T 3f0h_A 270 ---IKKHGGADAEVARIASQAADFRAKIKDLPFELVSESPANGVTSVH-PTT------ANAYDIFLKLKDEYGIWICPNG 339 (376)
T ss_dssp ---HHHTTHHHHHHHHHHHHHHHHHHHTTTSSEEECCSSBBTTEEEEE-ESS------SCHHHHHHHHHHHSSEECEECC
T ss_pred ---HHHhcCHHHHHHHHHHHHHHHHHHHHHcCCccCccccCceEEEEe-CCC------CCHHHHHHHHHHhCCEEEecCc
Confidence 222 3577788888999999999998887765543322 22222 222 1346788887775699999884
Q ss_pred CcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 298 ACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 298 ~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
. ...++++|++++. .+++++++++++|++++++
T Consensus 340 ~--~~~~~~lRis~~~~~t~e~i~~~~~~l~~~l~~ 373 (376)
T 3f0h_A 340 G--EMKDTIFRVGHIGALTHEDNTTLVNAFKDLQKR 373 (376)
T ss_dssp G--GGTTTCEEEECCSSCCHHHHHHHHHHHHHHHHT
T ss_pred c--ccCCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 3 2346799999974 6999999999999999875
No 113
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=100.00 E-value=2.1e-32 Score=248.67 Aligned_cols=289 Identities=17% Similarity=0.184 Sum_probs=213.5
Q ss_pred hhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcC----CCCeEEecCCCCCChhhhhh--hccCcEEEEEeCCCCCCccc
Q 019899 6 SQVLGQAVSFDPSQIVLTAGATPAVEILCFCLAD----HGNALLVPSPYYPGFDRDIR--FRTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 6 ~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~----~gd~vl~~~p~~~~~~~~~~--~~~g~~v~~v~~~~~~~~~~ 79 (334)
++.+++.+++++++|++|+|+++|+..++.++.+ +||+|+++.|+|+++...+. ...|.+++.++++ .++.+
T Consensus 74 ~~~la~~~~~~~~~v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~ 151 (423)
T 3lvm_A 74 RNQIADLVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQ--RNGII 151 (423)
T ss_dssp HHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCC--TTSCC
T ss_pred HHHHHHHcCCCCCeEEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccC--CCCcc
Confidence 3444444556788999999999999999998873 79999999999999887764 0459999999984 45678
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
|++++++++++ +++++++++|+||||.++| +++|.++|+++|++||+|++|+.... ..... .
T Consensus 152 d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~----~~~~~---~-- 213 (423)
T 3lvm_A 152 DLKELEAAMRD------DTILVSIMHVNNEIGVVQD---IAAIGEMCRARGIIYHVDATQSVGKL----PIDLS---Q-- 213 (423)
T ss_dssp CHHHHHHHCCT------TEEEEECCSBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTTS----CCCTT---T--
T ss_pred CHHHHHHhcCC------CcEEEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEEEhhhhcCCC----CcChh---h--
Confidence 99999999976 7899999999999999999 88899999999999999999875221 11111 1
Q ss_pred ccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh---------cccCCChHHHHHHHHhhCChHHHHHHHHH
Q 019899 160 EVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT---------RFCSISAPTQRLLISMLSDTKFIQEYLET 230 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 230 (334)
.+.++++.|+||.+|+.| +|++++ +++..+.+.... ..++.+...+.++..++.. +.+.+.+
T Consensus 214 ---~~~di~~~s~sK~~g~~g--~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~---~~~~~~~ 284 (423)
T 3lvm_A 214 ---LKVDLMSFSGHKIYGPKG--IGALYV-RRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRI---AKEEMAT 284 (423)
T ss_dssp ---SCCSEEEEESTTTTSCSS--CEEEEE-CBTTBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHH---HHHHHHH
T ss_pred ---cCCCEEEechHHhcCCCC--eEEEEE-eccccCCCCccccCCcccccccCCCCCHHHHHHHHHHHHH---HHHHHHH
Confidence 456788999999887666 899998 544444443321 1234456666666555542 2344678
Q ss_pred HHHHHHHHHHHHHHHHHhC-CCcccCCCc---eeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCC---
Q 019899 231 NKRRIKKLYDSFVAGLKQL-GIRCSESSA---GLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIE--- 303 (334)
Q Consensus 231 ~~~~~~~~~~~~~~~l~~~-g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~--- 303 (334)
..++++++++++.+.|+++ ++++..+.+ +.++++.++.. +..++... +.+ |.+.+|..|.+..
T Consensus 285 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~-l~~--i~v~~g~~~~~~~~~~ 354 (423)
T 3lvm_A 285 EMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNYV-------EGESLIMA-LKD--LAVSSGSACTSASLEP 354 (423)
T ss_dssp HHHHHHHHHHHHHHHHTTSTTEEEESCSTTBCTTEEEEEETTS-------CHHHHHHH-TTT--EECBCCCC-----CCC
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEeCCC-------CHHHHHHH-Hhh--heeccCccccCCCccc
Confidence 8889999999999999887 787766543 23444555432 33566666 554 8899988765421
Q ss_pred --------------CCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 304 --------------PGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 304 --------------~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
++++|++++. .++++++++++.|++++++.
T Consensus 355 ~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~~~~ 399 (423)
T 3lvm_A 355 SYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRL 399 (423)
T ss_dssp CHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 3789999985 58899999999999998764
No 114
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=100.00 E-value=1.3e-31 Score=242.27 Aligned_cols=287 Identities=15% Similarity=0.092 Sum_probs=208.8
Q ss_pred CCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChh---hhhhhccCc--EEEEEeCCCCCCccccHHHHHHH
Q 019899 13 VSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFD---RDIRFRTGV--ELIPVHCRSTDNFAFSITALDQA 87 (334)
Q Consensus 13 ~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~---~~~~~~~g~--~v~~v~~~~~~~~~~~~~~l~~~ 87 (334)
++++++++++++| ++++..++.+++++||+|+++.|+|+++. ..++ ..|. .++.++++ ++++.+|+++++++
T Consensus 82 ~g~~~~~i~~~sG-t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~-~~~~~~d~~~l~~~ 158 (407)
T 2dkj_A 82 FGAAWANVQPHSG-SQANMAVYMALMEPGDTLMGMDLAAGGHLTHGSRVN-FSGKLYKVVSYGVR-PDTELIDLEEVRRL 158 (407)
T ss_dssp HTCSEEECCCSSH-HHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTS-HHHHHSEEEEECCC-TTTSSCCHHHHHHH
T ss_pred hCCCcceEEecch-HHHHHHHHHHhcCCCCEEEEecccccCccchHHHHH-hcCceEEEEecCCC-cccCccCHHHHHHH
Confidence 4455555666665 56999999999999999999999999884 4455 5566 44444432 24678999999999
Q ss_pred HHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccc-cccCCCCcchhhhhhhccccCCCcE
Q 019899 88 FNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGG-SIFGNEEFVSMAEILEAEEVDKDRV 166 (334)
Q Consensus 88 l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (334)
+++. ++++|++++|+|| ...+ +++|.++|+++|+++|+|++|+. +.+.+..... + ...+
T Consensus 159 l~~~-----~~~~v~~~~p~~~--~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~---~-------~~~d 218 (407)
T 2dkj_A 159 ALEH-----RPKVIVAGASAYP--RFWD---FKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNP---L-------PYAH 218 (407)
T ss_dssp HHHH-----CCSEEEECCSSCC--SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCC---T-------TTCS
T ss_pred Hhhc-----CCeEEEEeccccC--CCCC---HHHHHHHHHHcCCEEEEEccccccccccCccCCc---c-------cccc
Confidence 9853 7898999899997 6667 89999999999999999999987 4433321111 1 1256
Q ss_pred EEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccC---CChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHH
Q 019899 167 HIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCS---ISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFV 243 (334)
Q Consensus 167 ~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (334)
+++.|+||++ +|.|+||++++++++.+.+......+. .+.....++..++... ..+++.+..++++++++++.
T Consensus 219 i~~~s~sK~l--~g~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~~l~ 294 (407)
T 2dkj_A 219 VVTSTTHKTL--RGPRGGLILSNDPELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEA--LQPEFKEYSRLVVENAKRLA 294 (407)
T ss_dssp EEEEESSGGG--CCCSCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHH--HSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccccC--CCCCceEEEECCHHHHHHHHhhhcccccCCCcHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHH
Confidence 8889999966 577889999944889888876554432 2333333444444321 13456778888999999999
Q ss_pred HHHHhCCCcccC-CCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCc----CCCCCCeEEEEecC-----
Q 019899 244 AGLKQLGIRCSE-SSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSAC----HCIEPGWFRCCFTS----- 313 (334)
Q Consensus 244 ~~l~~~g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~----~~~~~~~iRi~~~~----- 313 (334)
+.|++.|+++.. +..++++|++++... .+..++... +.++||.+.+|..+ +...++++|++++.
T Consensus 295 ~~L~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~ 368 (407)
T 2dkj_A 295 EELARRGYRIVTGGTDNHLFLVDLRPKG-----LTGKEAEER-LDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRG 368 (407)
T ss_dssp HHHHHTTCEEGGGSCSSSEEEEECGGGT-----CCHHHHHHH-HHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTT
T ss_pred HHHHhCCceeecCCCCceEEEEECcccC-----CCHHHHHHH-HHHcCceecCCcCccccccccCCCceeeecccccccC
Confidence 999988888764 356778889887421 134567777 46689999998753 22235789999963
Q ss_pred CCcccHHHHHHHHHHHHHH
Q 019899 314 LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 314 ~~~~~l~~~l~~l~~~~~~ 332 (334)
.+++++++++++|++++++
T Consensus 369 ~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 369 FTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp CCGGGHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhc
Confidence 6899999999999998875
No 115
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.98 E-value=2e-31 Score=236.86 Aligned_cols=294 Identities=16% Similarity=0.167 Sum_probs=212.2
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhh--hhhccCcEEEEEeCCCCCCccc
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRD--IRFRTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~--~~~~~g~~v~~v~~~~~~~~~~ 79 (334)
++++.+.+ ++++++|++|+|+++++..++.++.++||+|++++|+|+++... ++ ..|.+++.++. +++.+
T Consensus 55 ~~~l~~~~----g~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~-~~g~~~~~v~~---~~~~~ 126 (359)
T 1svv_A 55 ARLIGELL----ERPDADVHFISGGTQTNLIACSLALRPWEAVIATQLGHISTHETGAIE-ATGHKVVTAPC---PDGKL 126 (359)
T ss_dssp HHHHHHHH----TCTTSEEEEESCHHHHHHHHHHHHCCTTEEEEEETTSHHHHSSTTHHH-HTTCCEEEECC---TTSCC
T ss_pred HHHHHHHh----CCCCccEEEeCCchHHHHHHHHHHhCCCCEEEEcccchHHHHHHHHHh-cCCCeeEEEeC---CCCee
Confidence 34455444 46788999999999999999999999999999999999998884 66 78999999996 35789
Q ss_pred cHHHHHHHHHHH-HHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCc-chhhhhhh
Q 019899 80 SITALDQAFNQA-RKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEF-VSMAEILE 157 (334)
Q Consensus 80 ~~~~l~~~l~~~-~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~-~~~~~~~~ 157 (334)
|++++++++++. ..++.++++|++++| ||||.++|.+++++|.++|++||+++|+|++|..+.++..+. .....+.
T Consensus 127 d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~- 204 (359)
T 1svv_A 127 RVADIESALHENRSEHMVIPKLVYISNT-TEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIA- 204 (359)
T ss_dssp CHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHH-
T ss_pred cHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhh-
Confidence 999999999862 012224899999999 799999999999999999999999999999995543221111 1111110
Q ss_pred ccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh--cc--cCCChHHHHHHHHhhCChHHHHHHHHHHHH
Q 019899 158 AEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT--RF--CSISAPTQRLLISMLSDTKFIQEYLETNKR 233 (334)
Q Consensus 158 ~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 233 (334)
...++++.|++|..+ ..+.|++++ ++++.+.+.... .. +..+.....++..++.... +.+.++
T Consensus 205 -----~~~d~~~~s~~K~g~--~~~~g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~ 271 (359)
T 1svv_A 205 -----RLTDMFYIGATKAGG--MFGEALIIL-NDALKPNARHLIKQRGALMAKGWLLGIQFEVLMKDNL-----FFELGA 271 (359)
T ss_dssp -----HHCSEEEEECTTTTC--SSCEEEEEC-SGGGCTTHHHHHHHTTCCCTTTHHHHHHHHHHTSTTH-----HHHHHH
T ss_pred -----hcCCEEEEecccCCC--CCceEEEEE-cccHHHHHHHHHhcCCcccccchhhHHHHHHHHhhhh-----HHHHHH
Confidence 122367779999643 356799998 777766665432 11 1223333344445555422 356677
Q ss_pred HHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC
Q 019899 234 RIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS 313 (334)
Q Consensus 234 ~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~ 313 (334)
+++++++++.+.|+..++++..+.+++++|++++ .++...|++++||.+.+.. ...++++|++++.
T Consensus 272 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~~gi~v~~~~---~~~~~~iRi~~~~ 337 (359)
T 1svv_A 272 HSNKMAAILKAGLEACGIRLAWPSASNQLFPILE-----------NTMIAELNNDFDMYTVEPL---KDGTCIMRLCTSW 337 (359)
T ss_dssp HHHHHHHHHHHHHHHTTCCBSSCCSSSEECBEEE-----------HHHHHHHTTTEECEEEEEE---TTTEEEEEEECCT
T ss_pred HHHHHHHHHHHHhccCCeEEccCCccceEEEEcC-----------HHHHHHHHHhcCEEEEecc---cCCCceEEEEccC
Confidence 8888899999999555888887788888888775 3778886665599983210 1235689999874
Q ss_pred -CCcccHHHHHHHHHHHHHH
Q 019899 314 -LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 314 -~~~~~l~~~l~~l~~~~~~ 332 (334)
.+++++++++++|++++++
T Consensus 338 ~~~~~~i~~~~~~l~~~~~~ 357 (359)
T 1svv_A 338 ATEEKECHRFVEVLKRLVAS 357 (359)
T ss_dssp TCCHHHHHHHHHHHHHC---
T ss_pred cCCHHHHHHHHHHHHHHHhc
Confidence 6899999999999998765
No 116
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.97 E-value=7.4e-31 Score=233.44 Aligned_cols=270 Identities=12% Similarity=0.074 Sum_probs=203.6
Q ss_pred CCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCC-hhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 16 DPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPG-FDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~-~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
+++++++|+|+++++..++.++.++ +.+++..+.|.. +...++ ..|.+++.++. +.++.+|+++++ ++
T Consensus 60 ~~~~v~~~~g~t~al~~~~~~l~~~-~~i~~~~~~~~~~~~~~~~-~~g~~~~~v~~--~~~~~~d~~~l~--~~----- 128 (362)
T 3ffr_A 60 SNYEVLFLASATEIWERIIQNCVEK-KSFHCVNGSFSKRFYEFAG-ELGREAYKEEA--AFGKGFYPADIT--VP----- 128 (362)
T ss_dssp TTEEEEEESCHHHHHHHHHHHHCSS-EEEEEECSHHHHHHHHHHH-HTTCEEEEEEC--CTTCCCCGGGCC--CC-----
T ss_pred CCcEEEEeCCchHHHHHHHHhccCC-cEEEEcCcHHHHHHHHHHH-HhCCCeEEEec--CCCCCCCHHHHh--cc-----
Confidence 4578999999999999999999877 555555556552 233455 67999999998 455688999998 33
Q ss_pred CCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc-CcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEeccc
Q 019899 95 GVKVRGILICNPANPVGNIIPRETLYELLDFAREK-NIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLS 173 (334)
Q Consensus 95 ~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~-~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s 173 (334)
.++++|++++|+||||.++| +++|.++|++| |+++|+|++|+.+... ..+ ...++++.|+|
T Consensus 129 -~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~p~~~li~D~a~~~~~~~----~~~----------~~~d~~~~s~~ 190 (362)
T 3ffr_A 129 -ADAEIICLTHNETSSGVSMP---VEDINTFRDKNKDALIFVDAVSSLPYPK----FDW----------TKIDSVFFSVQ 190 (362)
T ss_dssp -TTCCEEEEESEETTTTEECC---HHHHTTSGGGSTTSEEEEECTTTTTSSC----CCT----------TSCSEEEEETT
T ss_pred -CCccEEEEEcCCCCcceeCC---HHHHHHHHHhCCCCEEEEecccccCCcc----cCh----------hHCcEEEEecc
Confidence 38999999999999999999 88899999999 9999999998753321 111 12457889999
Q ss_pred ccCC-CCCceEEEEeecCHHHHHHHHHhhc-----------------------ccCCChHHHHHHHHhhCChHHHHHHHH
Q 019899 174 KDLS-LPGFRTGVIYSYNESVLAAAKKLTR-----------------------FCSISAPTQRLLISMLSDTKFIQEYLE 229 (334)
Q Consensus 174 K~~~-~~g~r~g~i~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~l~~~~~~~~~~~ 229 (334)
|+++ ++| +|++++ ++++.+.+..... .++.+...+.++..++.... ...+.
T Consensus 191 K~~~~~~G--~g~~~~-~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~--~~~~~ 265 (362)
T 3ffr_A 191 KCFGLPAG--LGVWIL-NDRVIEKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDML--QISAD 265 (362)
T ss_dssp STTCCCSC--CEEEEE-EHHHHHHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHH--HHCHH
T ss_pred cccCCCCc--eEEEEE-CHHHHHHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHH--HccHH
Confidence 9997 677 577777 7787777765432 44566666666666654211 22256
Q ss_pred HHHHHHHHHHHHHHHHHHhC-CCcccCC----CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCC
Q 019899 230 TNKRRIKKLYDSFVAGLKQL-GIRCSES----SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEP 304 (334)
Q Consensus 230 ~~~~~~~~~~~~~~~~l~~~-g~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~ 304 (334)
+..+++.++++++.+.|+++ |+++..+ ..+.++|+.++. +..++.+.|.+ +||.+.+|..+. .+
T Consensus 266 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~l~~-~gi~~~~g~~~~--~~ 334 (362)
T 3ffr_A 266 GIRKQTEEKAALINTYIESSKVFSFGVEDAKLRSMTTIVANTTM--------LPGEINKILEP-FDMAVGAGYGSK--KE 334 (362)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCSSEEEEEESS--------CHHHHHHHHGG-GTEEEEECSGGG--TT
T ss_pred HHHHHHHHHHHHHHHHHHHccCceeccCChhhcCCceEEEecCC--------CHHHHHHHHHH-CCeEEecCcccc--CC
Confidence 77888999999999999998 8877652 235677788875 24678888555 599999986542 46
Q ss_pred CeEEEEecC-CCcccHHHHHHHHHHHH
Q 019899 305 GWFRCCFTS-LTHEDIPLVIERIQKVA 330 (334)
Q Consensus 305 ~~iRi~~~~-~~~~~l~~~l~~l~~~~ 330 (334)
+++|++++. .++++++++++.|++++
T Consensus 335 ~~iRis~~~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 335 TQIRIANFPAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp TEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 899999985 58999999999998864
No 117
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.97 E-value=1.2e-31 Score=241.87 Aligned_cols=290 Identities=16% Similarity=0.131 Sum_probs=196.4
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc----CCCC-eEEecCCCCCChhhhhhh--ccCcEEEEEeCCCCCCc
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLA----DHGN-ALLVPSPYYPGFDRDIRF--RTGVELIPVHCRSTDNF 77 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~----~~gd-~vl~~~p~~~~~~~~~~~--~~g~~v~~v~~~~~~~~ 77 (334)
+++.+++.+++++++|++|+|+++++..++.++. ++|| +|+++.++|+++...+.. ..|.+++.++++ .++
T Consensus 68 l~~~la~~~~~~~~~v~~~~g~t~al~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~ 145 (400)
T 3vax_A 68 AREYLASTVSAEPDELIFTSGATESNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPG--PSG 145 (400)
T ss_dssp HHHHHHHHTTCCGGGEEEESCHHHHHHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCC--TTC
T ss_pred HHHHHHHHcCCCCCcEEEeCCHHHHHHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccC--CCC
Confidence 3444445566778899999999999999999997 8999 999999999988776651 269999999984 466
Q ss_pred cccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhh
Q 019899 78 AFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILE 157 (334)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~ 157 (334)
.+|++++++++++ +++++++++|+||||.+.+ +++|.++|+++|+++|+|++|+... ....+ ..
T Consensus 146 ~~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~----~~~~~---~~ 209 (400)
T 3vax_A 146 RISVEGVMERLRP------DTLLVSLMHVNNETGVIQP---VAELAQQLRATPTYLHVDAAQGYGK----VPGDL---TT 209 (400)
T ss_dssp CCCHHHHHTTCCT------TEEEEECCSBCTTTCBBCC---HHHHHHHHTTSSCEEEEECTTTTTT----SGGGG---GS
T ss_pred CcCHHHHHHhcCC------CceEEEEECCCCCceeeCc---HHHHHHHHHhcCCEEEEEhhhhcCC----CCcCh---hh
Confidence 7899999999875 7899999999999999999 8999999999999999999997421 11111 11
Q ss_pred ccccCCCcEEEEecccccCCCCCceEEEEe-ecCHHHH---HHHHHh---------hcccCCChHHHHHHHHhhCChHHH
Q 019899 158 AEEVDKDRVHIIYGLSKDLSLPGFRTGVIY-SYNESVL---AAAKKL---------TRFCSISAPTQRLLISMLSDTKFI 224 (334)
Q Consensus 158 ~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~-~~~~~~~---~~~~~~---------~~~~~~~~~~~~~~~~~l~~~~~~ 224 (334)
. .++++.|+||.+|+.| +|+++ ++++++. ..+... ...++.+...+.++..++.. +
T Consensus 210 -----~-~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~---~ 278 (400)
T 3vax_A 210 -----P-IDMISISGHKIGAPKG--VGALVTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKI---F 278 (400)
T ss_dssp -----C-CSEEEEETGGGTSCSS--CEEEEECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHH---H
T ss_pred -----c-CcEEEEeHHHhCCCCc--eEEEEEecchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHH---H
Confidence 2 5688899999777555 56666 6442221 111111 11234456666666555542 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc---eeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCC
Q 019899 225 QEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSA---GLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHC 301 (334)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~ 301 (334)
.+++++.+++++++++++.+.|+..++++..+.+ +.++++.++.. +..++.+.| . +||.+.+|..|+.
T Consensus 279 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~L-~-~gi~v~~g~~~~~ 349 (400)
T 3vax_A 279 EAEHAQWQVAAQDLRSRLLAGLASTSFQVNGDQDHVVPHILNLSFEDV-------DAEAFLVTL-K-DLVAVATGSASTS 349 (400)
T ss_dssp HHSHHHHHHHHHHHHHHHHHHHTTTTCEECSCTTSBCTTEEEEECTTC-------CHHHHHHHH-H-HHHHHTTTTEEEE
T ss_pred HhhHHHHHHHHHHHHHHHHHhhCCCCEEEeCCcccCCCCEEEEEeCCC-------CHHHHHHHH-h-cCcEEEecccccC
Confidence 4456788889999999999999843787766554 33555666532 345777774 5 8999999876643
Q ss_pred C-------------C----CCeEEEEe-cC-CCcccHHHHHHHHHHHHHH
Q 019899 302 I-------------E----PGWFRCCF-TS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 302 ~-------------~----~~~iRi~~-~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
. . ++++|+++ +. .+++++++++++|++++++
T Consensus 350 ~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 350 ASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLKPS 399 (400)
T ss_dssp EEECCHHHHHTTTCCHHHHTSEEEEEEEEC--------------------
T ss_pred CCCCccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHhcc
Confidence 1 0 48999999 74 5899999999999998865
No 118
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.97 E-value=1.1e-30 Score=231.99 Aligned_cols=291 Identities=12% Similarity=0.112 Sum_probs=207.6
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhh--hhhcc--CcEEEEEeCCCCCCc
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRD--IRFRT--GVELIPVHCRSTDNF 77 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~--~~~~~--g~~v~~v~~~~~~~~ 77 (334)
++++.+.++ .+.++++++|+++++..++.++.++||+|+++.|+|+++... +. .. |.+++.+|.+ ++
T Consensus 49 ~~~la~~~g-----~~~~v~~~~~gt~a~~~al~~~~~~gd~vi~~~~~~~~~~~~~~~~-~~~~g~~~~~v~~~---~~ 119 (356)
T 1v72_A 49 KRKFCEIFE-----RDVEVFLVPTGTAANALCLSAMTPPWGNIYCHPASHINNDECGAPE-FFSNGAKLMTVDGP---AA 119 (356)
T ss_dssp HHHHHHHHT-----SCCEEEEESCHHHHHHHHHHTSCCTTEEEEECTTSHHHHSSTTHHH-HHTTSCEEEECCCG---GG
T ss_pred HHHHHHHhC-----CCCcEEEeCCccHHHHHHHHHhcCCCCEEEEcCccchhhhhchHHH-HHhCCcEEEEecCC---CC
Confidence 345555443 344699999999999999999999999999999999887766 66 55 9999999862 46
Q ss_pred cccHHHHHH-HHHHHH-HcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEecccccccc--CCCCcchhh
Q 019899 78 AFSITALDQ-AFNQAR-KRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIF--GNEEFVSMA 153 (334)
Q Consensus 78 ~~~~~~l~~-~l~~~~-~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~--~~~~~~~~~ 153 (334)
.+|++++++ ++++.. .++.++++|++++|+| ||.+++.+++++|.++|++||+++|+|++|..+.. .+... ...
T Consensus 120 ~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~-~~~ 197 (356)
T 1v72_A 120 KLDIVRLRERTREKVGDVHTTQPACVSITQATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSP-AEM 197 (356)
T ss_dssp CCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCT-TTT
T ss_pred eEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCH-HHh
Confidence 899999999 886410 1123689999999976 99999999999999999999999999999875321 11111 111
Q ss_pred hhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc-cCC---ChHHHHHHHHhhCChHHHHHHHH
Q 019899 154 EILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF-CSI---SAPTQRLLISMLSDTKFIQEYLE 229 (334)
Q Consensus 154 ~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~l~~~~~~~~~~~ 229 (334)
.+. .+..+++.|+||+ +. ....||+++ ++++.+.+...... ... +......+...+.... ..
T Consensus 198 ~~~------~~~d~~~~s~sK~-g~-~~G~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~ 263 (356)
T 1v72_A 198 TWK------AGVDALSFGATKN-GV-LAAEAIVLF-NTSLATEMSYRRKRAGHLSSKMRFLSAQIDAYLTDDL-----WL 263 (356)
T ss_dssp TGG------GTCCEEEECCGGG-TC-SSCEEEEES-SGGGHHHHHHHHHHTTCCCSSTHHHHHHHHHHTSTTH-----HH
T ss_pred hhh------hcCCEEEEecccC-CC-cCccEEEEE-CHHHHhhHHHHhhccCchhhhHHHHHHHHHHHHHhhh-----HH
Confidence 111 1223445689998 53 344568887 78887777654322 111 2223333344444322 23
Q ss_pred HHHHHHHHHHHHHHHHHHhC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEE
Q 019899 230 TNKRRIKKLYDSFVAGLKQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFR 308 (334)
Q Consensus 230 ~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iR 308 (334)
+..+++.++++++.+.|+++ |+++..+.+++++|++++ .++...| .++||.+.||. |+ ++++|
T Consensus 264 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~-----------~~~~~~l-~~~gi~v~~g~-~~---~~~iR 327 (356)
T 1v72_A 264 RNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRLD-----------SAMIDAL-LKAGFGFYHDR-WG---PNVVR 327 (356)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEEEC-----------HHHHHHH-HHTTCBCBCSS-SS---TTEEE
T ss_pred HHHHHHHHHHHHHHHHHhhCCCcEEccCCCccEEEEEcC-----------HHHHHHH-HhcCeEEeccc-cC---CCeEE
Confidence 34566778889999999885 888776777888898875 2677775 55799999887 54 67999
Q ss_pred EEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 309 CCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 309 i~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
++++. .+++++++++++|++++++.
T Consensus 328 i~~~~~~~~~~i~~~~~~l~~~l~~~ 353 (356)
T 1v72_A 328 FVTSFATTAEDVDHLLNQVRLAADRT 353 (356)
T ss_dssp EECCTTCCHHHHHHHHHHHHHTC---
T ss_pred EEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 99874 58999999999999987654
No 119
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.97 E-value=2.5e-30 Score=235.31 Aligned_cols=291 Identities=14% Similarity=0.103 Sum_probs=201.9
Q ss_pred CCcEEEecCcHHHHHHHHH---HhcCCCCeEEecCCCCCChhh-hhhhccCcE-------------EEEEeCCCC---CC
Q 019899 17 PSQIVLTAGATPAVEILCF---CLADHGNALLVPSPYYPGFDR-DIRFRTGVE-------------LIPVHCRST---DN 76 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~---~l~~~gd~vl~~~p~~~~~~~-~~~~~~g~~-------------v~~v~~~~~---~~ 76 (334)
+++|++|+|+++++..++. .+.++| +|++++|+|+++.. .+. ..|.+ ++.++++.+ .+
T Consensus 102 ~~~v~~~~g~~~a~~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~-~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~ 179 (426)
T 1sff_A 102 AKKTLLVTTGSEAVENAVKIARAATKRS-GTIAFSGAYHGRTHYTLA-LTGKVNPYSAGMGLMPGHVYRALYPCPLHGIS 179 (426)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHH-HSSCCTTTTTTSCCCCSSEEEECCCBGGGTBC
T ss_pred ccEEEEeCchHHHHHHHHHHHHHhhCCC-eEEEECCCcCCCchHhhh-hcCCccccccccCCCCCCcEEeCCCccccccc
Confidence 4899999999999999988 667776 89999999987654 444 44532 667776421 13
Q ss_pred ccccHHHHHHHHHHHHHcCCceeEEEEe-CCCCCcc-cCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhh
Q 019899 77 FAFSITALDQAFNQARKRGVKVRGILIC-NPANPVG-NIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAE 154 (334)
Q Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~~~i~~~-~p~nptG-~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~ 154 (334)
+.+|+++|++++++.. .+.++++|+++ +++| || .+.+.+++++|.++|++||++||+||+|+++.+.+... .+.
T Consensus 180 ~~~d~~~l~~~l~~~~-~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~- 255 (426)
T 1sff_A 180 EDDAIASIHRIFKNDA-APEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLF-AME- 255 (426)
T ss_dssp HHHHHHHHHHHHHHTC-CGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGG-
T ss_pred hHHHHHHHHHHHHhcc-CCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchh-hhh-
Confidence 4579999999987410 01267766653 3366 99 78899999999999999999999999999876654321 111
Q ss_pred hhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHH--hhcccCCChHHHHHHHHhhCChHHHHHHHHHHH
Q 019899 155 ILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKK--LTRFCSISAPTQRLLISMLSDTKFIQEYLETNK 232 (334)
Q Consensus 155 ~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 232 (334)
. .+....+.|+||+++. |+|+||+++ ++++++.+.. ....++.+++.+.++.++++..+ + ....
T Consensus 256 ~-------~~~~~di~s~sK~~~~-GlriG~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~---~--~~~~ 321 (426)
T 1sff_A 256 Q-------MGVAPDLTTFAKSIAG-GFPLAGVTG-RAEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFE---Q--ENLL 321 (426)
T ss_dssp G-------TTSCCSEEEECGGGGT-SSCCEEEEE-EHHHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHH---H--TTHH
T ss_pred h-------cCCCCCEEEEcccccC-CCceEEEEE-cHHHHhhhccCCcCcCCCCCHHHHHHHHHHHHHHH---h--cCHH
Confidence 1 1222234599999995 999999999 6777776653 23345678888888887764321 1 1234
Q ss_pred HHHHHHHHHHHHHHHhCC--Cc---ccCCCceeEEeeecCCcCCC--CChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCC
Q 019899 233 RRIKKLYDSFVAGLKQLG--IR---CSESSAGLYCWADMSGLIPS--YSEKGELELWDKLLNIAKINVTPGSACHCIEPG 305 (334)
Q Consensus 233 ~~~~~~~~~~~~~l~~~g--~~---~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~ 305 (334)
++++++++++.+.|++++ +. ...+. |+++|++++..... ....+..++...|++ +||.+.||..+ ++
T Consensus 322 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~gi~v~~~~~~----~~ 395 (426)
T 1sff_A 322 QKANDLGQKLKDGLLAIAEKHPEIGDVRGL-GAMIAIELFEDGDHNKPDAKLTAEIVARARD-KGLILLSCGPY----YN 395 (426)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTEEEEEEE-TTEEEEEEBGGGCTTSBCHHHHHHHHHHHHH-TTEECEEESTT----SC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeEEEEEE-EEEEEEEEecCccccCCChHHHHHHHHHHHH-CCcEEecCCCC----CC
Confidence 556666666666665532 22 22333 67888988542110 012345678888655 79999998753 57
Q ss_pred eEEEEec-CCCcccHHHHHHHHHHHHHHc
Q 019899 306 WFRCCFT-SLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 306 ~iRi~~~-~~~~~~l~~~l~~l~~~~~~~ 333 (334)
++|++++ ..+++++++++++|++++++.
T Consensus 396 ~iRi~~~~~~~~~~i~~~~~~l~~~l~~~ 424 (426)
T 1sff_A 396 VLRILVPLTIEDAQIRQGLEIISQCFDEA 424 (426)
T ss_dssp EEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 8999987 379999999999999998764
No 120
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.97 E-value=1.9e-29 Score=231.56 Aligned_cols=296 Identities=14% Similarity=0.131 Sum_probs=205.6
Q ss_pred CCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCC-CChhhhhhhccCcEEEEEeCCCC----C----CccccHHHHHHH
Q 019899 17 PSQIVLTAGATPAVEILCFCLADHGNALLVPSPYY-PGFDRDIRFRTGVELIPVHCRST----D----NFAFSITALDQA 87 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~-~~~~~~~~~~~g~~v~~v~~~~~----~----~~~~~~~~l~~~ 87 (334)
.+++++++|+++|+..++.+++++|| +++.|+| ..+...+. ..|.+++.+++.++ + ++.+|+++|+++
T Consensus 90 ~~~~~~~~~gt~a~~~al~~l~~~gd--i~~~~~~~~~~~~~~~-~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~ 166 (456)
T 2ez2_A 90 FKHIVPTHQGRGAENLLSQLAIKPGQ--YVAGNMYFTTTRYHQE-KNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKL 166 (456)
T ss_dssp CSEEEEESSHHHHHHHHHHHHCCTTC--EEEESSCCHHHHHHHH-HTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHH
T ss_pred CCcEEEeCCcHHHHHHHHHHhCCCCC--EeccccccchhHHHHH-HcCCEEEEecccccccccccccccCCCCHHHHHHH
Confidence 35899999999999999999999999 7889999 66677777 88999999987521 1 368899999999
Q ss_pred HHHHHHcCCceeEEEEeCCCC-CcccCCCHHHHHHHHHHHHhcCcEEEEeccccc----------cccCCCCcchhh-hh
Q 019899 88 FNQARKRGVKVRGILICNPAN-PVGNIIPRETLYELLDFAREKNIHVISDEIYGG----------SIFGNEEFVSMA-EI 155 (334)
Q Consensus 88 l~~~~~~~~~~~~i~~~~p~n-ptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~----------~~~~~~~~~~~~-~~ 155 (334)
+++.. ..++++|++++|+| |||.+++.+++++|.++|++||++||+||+|+. +.+.+....++. ..
T Consensus 167 i~~~t--~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~ 244 (456)
T 2ez2_A 167 IDEKG--AENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEM 244 (456)
T ss_dssp HHHHC--GGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHH
T ss_pred HHhcc--ccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhh
Confidence 98631 01358999999988 999999999999999999999999999999986 344443221111 11
Q ss_pred hhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcc-------cCCChHHHHH-HHHhhCChHHHHHH
Q 019899 156 LEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF-------CSISAPTQRL-LISMLSDTKFIQEY 227 (334)
Q Consensus 156 ~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~-------~~~~~~~~~~-~~~~l~~~~~~~~~ 227 (334)
.. ..+++++ |++|..+ .| +.||++++++++.+.+...... .+.+.....+ +...+ +.++
T Consensus 245 ~~-----~~d~~~~-S~kk~~~-~~-~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~---~~~~-- 311 (456)
T 2ez2_A 245 FS-----YADGCTM-SGKKDCL-VN-IGGFLCMNDDEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLR---EAMQ-- 311 (456)
T ss_dssp HT-----TCSEEEE-ETTTTTC-CS-SCEEEEESCHHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHH---HHTC--
T ss_pred cc-----cCCEEEE-eCcccCC-CC-ceeEEEECCHHHHHHHHHHHhhccCcccccCcchhHHHHHHHHHH---HHhH--
Confidence 11 2334444 7888765 66 7899998678888877654322 1223332222 22221 1111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCC---cCCCCChhhHHHHHHHHHHhcCeEEcC-CCCcC---
Q 019899 228 LETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSG---LIPSYSEKGELELWDKLLNIAKINVTP-GSACH--- 300 (334)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~ll~~~gi~v~~-g~~~~--- 300 (334)
....++..++.+++.+.|++.|+++..+.+++++|++++. ..+. .......+...|++++||.+.+ |..|.
T Consensus 312 -~~~~~~~~~~~~~l~~~L~~~g~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~ 389 (456)
T 2ez2_A 312 -YEYIEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFCEHLTQ-DEFPAQSLAASIYVETGVRSMERGIISAGRN 389 (456)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHTTCCBCSSCCSSEEEEEHHHHTTTSCG-GGCHHHHHHHHHHHHHSEECEEESHHHHCBC
T ss_pred -HHHHHHHHHHHHHHHHHHhcCCCccccCCCceEEEEEhHHhcCCCCh-hhccHHHHHHHHHHhcCeeeecccccccccC
Confidence 2333444556678888888778887778888999988752 1111 0011234477765778998765 44331
Q ss_pred ----C---CCCCeEEEEecC--CCcccHHHHHHHHHHHHHH
Q 019899 301 ----C---IEPGWFRCCFTS--LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 301 ----~---~~~~~iRi~~~~--~~~~~l~~~l~~l~~~~~~ 332 (334)
. ...+++|++++. .+++++++++++|++++++
T Consensus 390 ~~~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~~~l~~ 430 (456)
T 2ez2_A 390 NVTGEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQH 430 (456)
T ss_dssp TTTCSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHHHHHHT
T ss_pred ccccccccCCCCeEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 1 123789999984 5899999999999999865
No 121
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.97 E-value=5.6e-30 Score=228.83 Aligned_cols=278 Identities=14% Similarity=0.072 Sum_probs=193.1
Q ss_pred CCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhh---hhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 17 PSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDR---DIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~---~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
++++++++|+++++..++.++ +||+|+++.|+|+++.. .++ ..|.+++.+ . |+++++++ +
T Consensus 76 ~~~~~~~~ggt~a~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~~~~-~~g~~~~~v-~--------d~~~l~~~-~---- 138 (374)
T 2aeu_A 76 NDKCVGFNRTSSAILATILAL--KPKKVIHYLPELPGHPSIERSCK-IVNAKYFES-D--------KVGEILNK-I---- 138 (374)
T ss_dssp TEEEEEESSHHHHHHHHHHHH--CCSEEEEECSSSSCCTHHHHHHH-HTTCEEEEE-S--------CHHHHHTT-C----
T ss_pred cceEEEEcChHHHHHHHHHhC--CCCEEEEecCCCCccHHHHHHHH-HcCcEEEEe-C--------CHHHHHhc-C----
Confidence 478999999999999999988 99999999998887654 455 679988887 2 67888776 3
Q ss_pred cCCceeE-EEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEecccccccc-CCCCcchhhhhhhccccCCCcEEEEec
Q 019899 94 RGVKVRG-ILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIF-GNEEFVSMAEILEAEEVDKDRVHIIYG 171 (334)
Q Consensus 94 ~~~~~~~-i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s 171 (334)
.++++ |++++|+||||. +..++++|.++|++||+++|+|++|+.+.. .... .+... .+.++++.|
T Consensus 139 --~~~~~~v~~~~p~nptG~--~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~-~~~~~--------~~~di~~~S 205 (374)
T 2aeu_A 139 --DKDTLVIITGSTMDLKVI--ELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQ-PPALK--------LGADLVVTS 205 (374)
T ss_dssp --CTTEEEEEECBCTTSCBC--CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTC-CCHHH--------HTCSEEEEE
T ss_pred --CCccEEEEEccCCCCCCC--CcccHHHHHHHHHHcCCEEEEECCccccccccccc-CCccc--------cCCcEEEec
Confidence 27899 999999999997 677799999999999999999999987531 0000 00111 244678899
Q ss_pred ccccCCCCCceEEEEeecCHHHHHHHHHhhccc--CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHH----HHHHHHH
Q 019899 172 LSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFC--SISAPTQRLLISMLSDTKFIQEYLETNKRRIKKL----YDSFVAG 245 (334)
Q Consensus 172 ~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 245 (334)
+||++ +|+|+||+++ ++++++.++.....+ +.+++.+.++...+...+ .+.+.+..+..+.. ++.+.+.
T Consensus 206 ~sK~l--~g~~~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~ 280 (374)
T 2aeu_A 206 TDKLM--EGPRGGLLAG-KKELVDKIYIEGTKFGLEAQPPLLAGIYRALKNFN--LERIRKAFERAKNFDLSKIEKLNKE 280 (374)
T ss_dssp TTSSS--SSCSCEEEEE-EHHHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHCC--HHHHHHHHHHHHHCCCHHHHHHHHH
T ss_pred Ccccc--cCcceEEEEE-CHHHHHHHHHhhccccCCCCHHHHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99986 5679999998 788888887765443 457777777777765422 11112222222222 4556666
Q ss_pred HHhC----CCccc-CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC--CCccc
Q 019899 246 LKQL----GIRCS-ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS--LTHED 318 (334)
Q Consensus 246 l~~~----g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~--~~~~~ 318 (334)
|... |+.+. .+.+.++.|.+.+.... ..+..+++..+++++||.+.||..|. ..++++||+++. ..+.+
T Consensus 281 L~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~ll~~~gV~v~~g~~~~-~~~~~lRi~~~~~~~~~~~ 356 (374)
T 2aeu_A 281 LKAIDDNINIVYERTPTGFVIKRVYKDDTIN---IKKLIEIGFNLLKNYGIITITVAGMP-GASKSLRIDLTSRDAERID 356 (374)
T ss_dssp HTTTCTTEEEEEEECSSEEEEEEEESSHHHH---HHHHHHHHHHHHHHHCEECSTTSSSC-SSCCSEEEETTSGGGGGSC
T ss_pred hhhhhhccCcceeeCCceEEEEeeccccccc---ccchHHHHHHHHHhCCEEEecCCCCC-CCCCeEEEEcCCchHHHHH
Confidence 6552 55554 44444445544432100 01123467777888999999998763 345789999984 24446
Q ss_pred HHHHHHHHHHHHHHc
Q 019899 319 IPLVIERIQKVAETC 333 (334)
Q Consensus 319 l~~~l~~l~~~~~~~ 333 (334)
++++++.+++++++.
T Consensus 357 l~~l~~~l~~~l~~~ 371 (374)
T 2aeu_A 357 DNYIIKAIVESIKMA 371 (374)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 899999999888764
No 122
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.97 E-value=1.3e-30 Score=233.23 Aligned_cols=278 Identities=17% Similarity=0.137 Sum_probs=201.7
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHH---hc---CCC-CeEEecCCCCCChhhhhhhccCc-------E-----
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFC---LA---DHG-NALLVPSPYYPGFDRDIRFRTGV-------E----- 65 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~---l~---~~g-d~vl~~~p~~~~~~~~~~~~~g~-------~----- 65 (334)
+++.+++.+++ ++++++++|+++++..++.. +. ++| |+|++++|+|+.+...+....+. .
T Consensus 75 l~~~la~~~g~-~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (375)
T 2eh6_A 75 LAHKLVKHFWT-EGKVFFANSGTESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPG 153 (375)
T ss_dssp HHHHHHHTSSS-CEEEEEESSHHHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSS
T ss_pred HHHHHHhhcCC-CCeEEEeCchHHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCC
Confidence 34445544555 38999999999999999875 34 678 99999999999876655412221 1
Q ss_pred EEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEEEEecccccccc
Q 019899 66 LIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHVISDEIYGGSIF 144 (334)
Q Consensus 66 v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~ 144 (334)
+..++. .|++++++++++ ++++|++++|+||||.+. +.+++++|.++|+++|+++|+||+|+++.+
T Consensus 154 ~~~~~~-------~d~~~l~~~l~~------~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~ 220 (375)
T 2eh6_A 154 FSYAKL-------NDIDSVYKLLDE------ETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGR 220 (375)
T ss_dssp EEEECT-------TCHHHHHTTCCT------TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTT
T ss_pred ceeCCC-------chHHHHHHHhcC------CeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCC
Confidence 333332 488999988874 789999998899999994 688899999999999999999999997554
Q ss_pred CCCCcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHH--hhcccCCChHHHHHHHHhhCChH
Q 019899 145 GNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKK--LTRFCSISAPTQRLLISMLSDTK 222 (334)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~ 222 (334)
.+... .+..+.. ..+++ |+||.++ +|+|+||+++ ++++++.++. ....++.++..+.++..+++..
T Consensus 221 ~~~~~-~~~~~~~-----~~d~~---s~SK~~~-~g~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 288 (375)
T 2eh6_A 221 TGEFY-AYQHFNL-----KPDVI---ALAKGLG-GGVPIGAILA-REEVAQSFTPGSHGSTFGGNPLACRAGTVVVDEV- 288 (375)
T ss_dssp TSSSS-GGGGGTC-----CCSEE---EECGGGG-TTSCCEEEEE-EHHHHTTCCTTSCCCSSTTCHHHHHHHHHHHHHH-
T ss_pred CCcch-hhhhcCC-----CCCEE---EEccccc-CCCCeEEEEE-cHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHH-
Confidence 33211 2222211 12222 7889998 7999999998 6677776655 2334566777777776665432
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC
Q 019899 223 FIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI 302 (334)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~ 302 (334)
+ +..++++++++++.+.|++.+.... +..|+++|++++.. ..++...|++ +||.+.|+.
T Consensus 289 --~----~~~~~~~~~~~~l~~~L~~~~~~~~-~~~g~~~~~~~~~~--------~~~~~~~l~~-~gi~~~~~~----- 347 (375)
T 2eh6_A 289 --E----KLLPHVREVGNYFKEKLKELGKGKV-KGRGLMLGLELERE--------CKDYVLKALE-KGLLINCTA----- 347 (375)
T ss_dssp --H----HHHHHHHHHHHHHHHHHHHTTSSEE-EEETTEEEEECSSC--------CHHHHHHHHH-TTEECEEET-----
T ss_pred --H----HHHHHHHHHHHHHHHHHHHHhcCCc-eEEEEEEEEEEcCc--------HHHHHHHHHH-CCCEEecCC-----
Confidence 1 5667788888999999988765333 33567788888741 2578888654 899998752
Q ss_pred CCCeEEEEecC-CCcccHHHHHHHHHHHH
Q 019899 303 EPGWFRCCFTS-LTHEDIPLVIERIQKVA 330 (334)
Q Consensus 303 ~~~~iRi~~~~-~~~~~l~~~l~~l~~~~ 330 (334)
++++|++++. .+++++++++++|++++
T Consensus 348 -~~~iRi~~~~~~~~~~i~~~~~~l~~~l 375 (375)
T 2eh6_A 348 -GKVLRFLPPLIIQKEHIDRAISVLREIL 375 (375)
T ss_dssp -TTEEEECCCTTCCHHHHHHHHHHHHHHC
T ss_pred -CCEEEEECCCCCCHHHHHHHHHHHHHhC
Confidence 5789999874 69999999999998763
No 123
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.97 E-value=7.6e-31 Score=236.57 Aligned_cols=282 Identities=14% Similarity=0.132 Sum_probs=205.8
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcC------C-CCeEEecCCCCCChhh-hhhhccCcE-----------
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLAD------H-GNALLVPSPYYPGFDR-DIRFRTGVE----------- 65 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~------~-gd~vl~~~p~~~~~~~-~~~~~~g~~----------- 65 (334)
+++.+++.++ .+++++++|+++++..++.++.. + +++|++++|+|++... .+. ..|.+
T Consensus 87 l~~~la~~~g--~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~-~~g~~~~~~~~~p~~~ 163 (397)
T 2ord_A 87 LAELLSKNTF--GGKVFFANTGTEANEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLT-ATGQPKYQKPFEPLVP 163 (397)
T ss_dssp HHHHHHHTTT--SCEEEEESSHHHHHHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHH-HSBCHHHHGGGCSCCT
T ss_pred HHHHHHHhcC--CCeEEEeCCHHHHHHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhh-ccCChhhccccCCCCC
Confidence 3444444443 68999999999999999998753 4 5789999999976544 555 66655
Q ss_pred -EEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCccc-CCCHHHHHHHHHHHHhcCcEEEEeccccccc
Q 019899 66 -LIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGN-IIPRETLYELLDFAREKNIHVISDEIYGGSI 143 (334)
Q Consensus 66 -v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~-~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~ 143 (334)
++.++. .|++++++++++ ++++|++++|+||||. +++.+++++|.++|++||+++|+||+|+++.
T Consensus 164 ~~~~~~~-------~d~~~l~~~l~~------~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~ 230 (397)
T 2ord_A 164 GFEYFEF-------NNVEDLRRKMSE------DVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMG 230 (397)
T ss_dssp TEEEECT-------TCHHHHHHHCCT------TEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTT
T ss_pred CeeEecC-------CCHHHHHHHhhc------CeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCc
Confidence 666664 278999998875 7999999999999999 9999999999999999999999999998776
Q ss_pred cCCCCcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHH--hhcccCCChHHHHHHHHhhCCh
Q 019899 144 FGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKK--LTRFCSISAPTQRLLISMLSDT 221 (334)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~ 221 (334)
+.+.. ..+..+.. ..+ + .|+||.++ +|+|+||+++ ++++. .++. ....++.+++.+.++..+++..
T Consensus 231 ~~g~~-~~~~~~~~-----~~d-~--~s~sK~~~-~G~r~G~~~~-~~~~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~ 298 (397)
T 2ord_A 231 RTGKL-FAYQKYGV-----VPD-V--LTTAKGLG-GGVPIGAVIV-NERAN-VLEPGDHGTTFGGNPLACRAGVTVIKEL 298 (397)
T ss_dssp TTSSS-SHHHHHTC-----CCS-E--EEECGGGG-TTSCCEEEEE-CSTTC-CCCTTSSCCSSTTCHHHHHHHHHHHHHH
T ss_pred cCccc-hhhhhhCC-----CCC-e--eeeccccC-CCcCeEEEEE-chHhc-ccCCCCcCCCCCCCHHHHHHHHHHHHHH
Confidence 65432 22222221 122 2 27899999 8999999998 44555 5542 2334567888888877776432
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCccc--CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCC
Q 019899 222 KFIQEYLETNKRRIKKLYDSFVAGLKQL--GIRCS--ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGS 297 (334)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~--g~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~ 297 (334)
+ + .+.+++++++++++.+.|++. +++.. .+..|.++|++++... +..++.+.|++ +||.+.|+.
T Consensus 299 ~---~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~------~~~~l~~~l~~-~gi~v~~~~ 366 (397)
T 2ord_A 299 T---K--EGFLEEVEEKGNYLMKKLQEMKEEYDVVADVRGMGLMIGIQFREEV------SNREVATKCFE-NKLLVVPAG 366 (397)
T ss_dssp T---S--TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEECTTS------CHHHHHHHHHH-TTEECEEET
T ss_pred H---h--CCHHHHHHHHHHHHHHHHHHHHHhCCceEEEEEEeEEEEEEECChH------HHHHHHHHHHH-CCCEEccCC
Confidence 2 1 345667777788888888765 34321 1234566778887532 34678888655 899999863
Q ss_pred CcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 298 ACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 298 ~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
++++|++++. .+++++++++++|++++++
T Consensus 367 ------~~~iRis~~~~~~~e~i~~~~~~l~~~l~~ 396 (397)
T 2ord_A 367 ------NNTIRFLPPLTVEYGEIDLAVETLKKVLQG 396 (397)
T ss_dssp ------TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred ------CCEEEEECCcCCCHHHHHHHHHHHHHHHhh
Confidence 5789999763 6999999999999998864
No 124
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.97 E-value=5.1e-30 Score=238.60 Aligned_cols=294 Identities=15% Similarity=0.160 Sum_probs=213.3
Q ss_pred hhhhhhhcCCCCCCCCcE--EEecCcHHHHHHHHHHhcCCC--------CeEEecCCCCCChhhhhhhccCcEEEEEeCC
Q 019899 3 GFMSQVLGQAVSFDPSQI--VLTAGATPAVEILCFCLADHG--------NALLVPSPYYPGFDRDIRFRTGVELIPVHCR 72 (334)
Q Consensus 3 ~~~~~~~~~~~~~~~~~i--~~~~g~~~~~~~~~~~l~~~g--------d~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~ 72 (334)
+++.+.++ ...+++++ ++|+|+++++..++.++.++| |+|+++.|+|.++...++ ..|.+++.++++
T Consensus 146 ~~la~~~g--~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~~~-~~G~~v~~v~~~ 222 (514)
T 3mad_A 146 AMTAHMLG--GDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKAAQ-YFGIKLVRTPLD 222 (514)
T ss_dssp HHHHHHTT--GGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHHHH-HHTCEEEEECBC
T ss_pred HHHHHHcC--CCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHHHH-HcCCeeEEeeeC
Confidence 45555444 33333778 999999999999999987666 899999999999999998 889999999984
Q ss_pred CCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccC-----CC
Q 019899 73 STDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFG-----NE 147 (334)
Q Consensus 73 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~-----~~ 147 (334)
.++.+|+++|++++++ ++++|++++|+||||.+.+ +++|.++|++||+++|+|++|+++.+. +.
T Consensus 223 --~~~~~d~~~Le~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~ 291 (514)
T 3mad_A 223 --ADYRADVAAMREAITP------NTVVVAGSAPGYPHGVVDP---IPEIAALAAEHGIGCHVDACLGGFILPWAERLGY 291 (514)
T ss_dssp --TTSCBCHHHHHHHCCT------TEEEEEEETTCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTC
T ss_pred --CCCCCCHHHHHHHhcc------CCEEEEEeCCCCCCccccC---HHHHHHHHHHhCCeEEEecccccccchhHHhcCC
Confidence 4678999999999976 7999999999999999999 899999999999999999999976541 11
Q ss_pred CcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc------------ccCCChHHHHHHH
Q 019899 148 EFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR------------FCSISAPTQRLLI 215 (334)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~ 215 (334)
....+. .. ..+.++++.|++|+++ .|.++|+++++++.+......... .++.+.....++.
T Consensus 292 ~~~~~~-~~-----~~g~d~~~~s~~K~l~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~ 364 (514)
T 3mad_A 292 PVPPFD-FR-----LEGVTSVSADTHKYGY-GAKGTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAW 364 (514)
T ss_dssp CCCCCS-TT-----STTCCEEEECTTTTTC-CCSSCEEEEESSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHH
T ss_pred CCCccc-cc-----CCCCcEEEECchhccC-CCCCeEEEEEeCHHHhccccccccccCCCcccCCccCCCCchHHHHHHH
Confidence 001111 11 1456788899999875 677899999866655432211110 1122222223333
Q ss_pred HhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEc
Q 019899 216 SMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVT 294 (334)
Q Consensus 216 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~ 294 (334)
.++... ....+.+..+++.++++++.+.|++. ++++..+..+ ++++..+.. +..++.+.|.+ +||.+
T Consensus 365 aal~~l--~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~-~~~~~~~~~-------~~~~l~~~L~~-~Gi~v- 432 (514)
T 3mad_A 365 AAMLSL--GEEGYLDATRRILQAADRLKAGVRAIPSLKILGDPLW-VIAVASDEL-------NIYQVMEEMAG-RGWRL- 432 (514)
T ss_dssp HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCCSS-EEEEECSSS-------CHHHHHHHHHT-TTCBC-
T ss_pred HHHHHH--hHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCCeE-EEEEeCCCC-------CHHHHHHHHHh-cCCEe-
Confidence 333221 13445777888889999999999987 7887766655 555655321 34678888555 79987
Q ss_pred CCCCcCCCCCCeEEEEecC--CCcccHHHHHHHHHHHHHHc
Q 019899 295 PGSACHCIEPGWFRCCFTS--LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 295 ~g~~~~~~~~~~iRi~~~~--~~~~~l~~~l~~l~~~~~~~ 333 (334)
+|..+ ++++|++++. .+++++++++++|++++++.
T Consensus 433 ~g~~~----~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~ 469 (514)
T 3mad_A 433 NGLHR----PPAFHVALTLRHTEPGVVDRFLADLQDAVAQV 469 (514)
T ss_dssp EEETT----TTEEEEECCGGGGSTTHHHHHHHHHHHHHHHH
T ss_pred ccCCC----CCeEEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 44433 4689999873 46799999999999998753
No 125
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.97 E-value=6.9e-30 Score=232.71 Aligned_cols=304 Identities=13% Similarity=0.049 Sum_probs=185.6
Q ss_pred CCCCCCcEEEecCcHHHHHHHHHHhc--------CCCCeEEecCCCCCChhhhhhhccCc--------------EEEEEe
Q 019899 13 VSFDPSQIVLTAGATPAVEILCFCLA--------DHGNALLVPSPYYPGFDRDIRFRTGV--------------ELIPVH 70 (334)
Q Consensus 13 ~~~~~~~i~~~~g~~~~~~~~~~~l~--------~~gd~vl~~~p~~~~~~~~~~~~~g~--------------~v~~v~ 70 (334)
++.+.++|++++|+++++..++..+. .++++|++.+|+|+++........+. ++..++
T Consensus 85 ~~~~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (430)
T 3i4j_A 85 VGLPTFRFWAVSGGSEATESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLP 164 (430)
T ss_dssp TTCTTCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEEC
T ss_pred CCCCCCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcC
Confidence 45677899999999999999998875 45789999999999877654412222 222333
Q ss_pred CCCCCC---ccccHHHHHHHHHHHHHcCCceeEEEEeCCCC-Cccc-CCCHHHHHHHHHHHHhcCcEEEEeccccccccC
Q 019899 71 CRSTDN---FAFSITALDQAFNQARKRGVKVRGILICNPAN-PVGN-IIPRETLYELLDFAREKNIHVISDEIYGGSIFG 145 (334)
Q Consensus 71 ~~~~~~---~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~n-ptG~-~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~ 145 (334)
.+ +. ...|+++|++++++.. ..++++|++..++| ++|. ..+.+++++|.++|++||++||+||+|.++.+.
T Consensus 165 ~~--~~~~~~~~~~~~le~~l~~~~--~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~ 240 (430)
T 3i4j_A 165 KP--DPARNGAEDAEGLRALLEREG--PETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRC 240 (430)
T ss_dssp CC--CTTSCHHHHHTHHHHHHHHHC--GGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTT
T ss_pred CC--cccchhhHHHHHHHHHHHhcC--CCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcc
Confidence 21 11 2346789999997531 01455444444467 8887 567778999999999999999999999987665
Q ss_pred CCCcchhhhhhhccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHH------hhcccCCChHHHHHHHHhh
Q 019899 146 NEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKK------LTRFCSISAPTQRLLISML 218 (334)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l 218 (334)
+... ...... +....+.++||+++ .| +|+||+++ ++++++.+.. ....++.+++++.++.+++
T Consensus 241 g~~~-~~~~~~-------~~~~di~t~sK~l~-~G~~r~G~~~~-~~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal 310 (430)
T 3i4j_A 241 GSPL-ALSRWS-------GVTPDIAVLGKGLA-AGYAPLAGLLA-APQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVL 310 (430)
T ss_dssp SSSS-GGGGTT-------TCCCSEEEECGGGT-TTSSCCEEEEE-CHHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHH
T ss_pred cchh-hhhhhc-------CCCCcEEEEccccc-CCccccEEEEE-CHHHHHHHhccCCcccccCCCCCCHHHHHHHHHHH
Confidence 5422 111110 11112346899998 69 99999998 8999999875 2345678999998888887
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCceeEEeeecCCcCCCCC---hhhHHHHHHHHHHhcCeEEc
Q 019899 219 SDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSESSAGLYCWADMSGLIPSYS---EKGELELWDKLLNIAKINVT 294 (334)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~ll~~~gi~v~ 294 (334)
+..+. ++..++.++.....++.+.+.++++ ++....+. |.+++++++....... .....++...++ ++||.+.
T Consensus 311 ~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~ 387 (430)
T 3i4j_A 311 DIVER-EDLTGAAKERGAQLLAGLQALQARFPQMMQVRGT-GLLLGVVLGDLATGQAFETPGIASRIGAAAL-KRGLITY 387 (430)
T ss_dssp HHHHH-TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEE-TTEEEEEEC------------CHHHHHHHHH-HTTEECC
T ss_pred HHHHc-ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEE-EEEEEEEeccccccCCCccHHHHHHHHHHHH-hCCCEEE
Confidence 64321 2222333333333333344333333 23333443 4566677753211000 112356778865 5899999
Q ss_pred CCCCcC-CCCCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 295 PGSACH-CIEPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 295 ~g~~~~-~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
|+..+. ...++++|++++. .+++++++++++|++++++.
T Consensus 388 ~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 428 (430)
T 3i4j_A 388 PGSGAEPNGRGDHLLLGPPLSITAAEVDGLLALLAGALEDV 428 (430)
T ss_dssp -----------CEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ecccccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 974322 2235789999884 69999999999999998763
No 126
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.97 E-value=2e-30 Score=233.42 Aligned_cols=269 Identities=17% Similarity=0.167 Sum_probs=200.0
Q ss_pred CCcEEEecCcHHHHHHHHHHhcCC----------CCeEEecCCCCCChhhhhhhccCc------------EEEEEeCCCC
Q 019899 17 PSQIVLTAGATPAVEILCFCLADH----------GNALLVPSPYYPGFDRDIRFRTGV------------ELIPVHCRST 74 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~~~----------gd~vl~~~p~~~~~~~~~~~~~g~------------~v~~v~~~~~ 74 (334)
++++++++|+++++..++..+..+ +|+|+++.|+|+++...+....+. ++..++.
T Consensus 93 ~~~v~~~~~gt~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 169 (392)
T 3ruy_A 93 KEMVLPMNTGAEAVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPY--- 169 (392)
T ss_dssp CSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECT---
T ss_pred CCEEEEeCcHHHHHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCc---
Confidence 689999999999999999877543 689999999998766544312211 2444442
Q ss_pred CCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHH-HHHHHHHHHhcCcEEEEeccccccccCCCCcchhh
Q 019899 75 DNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRET-LYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMA 153 (334)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~-l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~ 153 (334)
.|++++++++++ ++++|++++|+||||.+++.++ +++|.++|++||+++|+||+|+++.+.+.... ..
T Consensus 170 ----~d~~~l~~~l~~------~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~-~~ 238 (392)
T 3ruy_A 170 ----GDLEALKAAITP------NTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFA-CD 238 (392)
T ss_dssp ----TCHHHHHHHCCT------TEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSG-GG
T ss_pred ----ccHHHHHHHhcc------CeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchh-hh
Confidence 278999999874 8999999999999999997666 99999999999999999999987766554321 11
Q ss_pred hhhhccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHHhh--cccCCChHHHHHHHHhhCChHHHHHHHHH
Q 019899 154 EILEAEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKKLT--RFCSISAPTQRLLISMLSDTKFIQEYLET 230 (334)
Q Consensus 154 ~~~~~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 230 (334)
... . ..+ +.++||.++ +| +|+||+++ ++++.+.+.... ..++.+++.+.++..+++..+ . ++
T Consensus 239 -~~~---~-~~d---~~~~SK~l~-gG~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~---~--~~ 303 (392)
T 3ruy_A 239 -WDN---V-TPD---MYILGKALG-GGVFPISCAAA-NRDILGVFEPGSHGSTFGGNPLACAVSIAALEVLE---E--EK 303 (392)
T ss_dssp -GGT---C-CCS---EEEECGGGG-TTTSCCEEEEE-CHHHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHHH---H--TT
T ss_pred -ccC---C-CCC---EEEEchhhh-CChhhhEEEEE-CHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHH---h--hh
Confidence 111 1 122 236789986 57 99999998 788877776543 346778888888888876432 1 56
Q ss_pred HHHHHHHHHHHHHHHHHhCCCc---ccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeE
Q 019899 231 NKRRIKKLYDSFVAGLKQLGIR---CSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWF 307 (334)
Q Consensus 231 ~~~~~~~~~~~~~~~l~~~g~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~i 307 (334)
..++++++++++.+.|++.+.. ...+.++ ++++.++. +..++...|+ ++||.+.|+. ++++
T Consensus 304 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~-~~~~~~~~--------~~~~l~~~l~-~~gi~v~~~~------~~~i 367 (392)
T 3ruy_A 304 LTERSLQLGEKLVGQLKEIDNPMITEVRGKGL-FIGIELNE--------PARPYCEQLK-AAGLLCKETH------ENVI 367 (392)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCTTEEEEEEETT-EEEEEESS--------CSHHHHHHHH-TTTEECCCBT------TTEE
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCceEEEeeee-EEEEEEcc--------hHHHHHHHHH-HCCcEEecCC------CCEE
Confidence 7778889999999999887532 2334444 45556664 2357888855 6899999865 5789
Q ss_pred EEEecC-CCcccHHHHHHHHHHHH
Q 019899 308 RCCFTS-LTHEDIPLVIERIQKVA 330 (334)
Q Consensus 308 Ri~~~~-~~~~~l~~~l~~l~~~~ 330 (334)
|++++. .+++++++++++|++++
T Consensus 368 Ri~~~~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 368 RIAPPLVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHHHHHh
Confidence 999764 68999999999999886
No 127
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.97 E-value=3.8e-29 Score=225.51 Aligned_cols=266 Identities=14% Similarity=0.133 Sum_probs=189.7
Q ss_pred cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhh----hhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 19 QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDI----RFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 19 ~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
+.++++++++++..++.+++++||+|+++.|+|+++...+ . ..|.+++.++.. |++++++++++
T Consensus 81 ~~i~~~sG~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~-------d~~~l~~~i~~---- 148 (398)
T 2rfv_A 81 AGLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMP-KFGINVRFVDAA-------KPEEIRAAMRP---- 148 (398)
T ss_dssp EEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHH-HTTCEEEEECTT-------SHHHHHHHCCT----
T ss_pred cEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHH-HcCCEEEEeCCC-------CHHHHHHhcCC----
Confidence 6667777789999999999999999999999999988776 5 689999999862 78999998875
Q ss_pred CCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEecccc
Q 019899 95 GVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSK 174 (334)
Q Consensus 95 ~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK 174 (334)
++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+.+.+.. .. . .+.++++.|+||
T Consensus 149 --~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~----~~----~-----~~~di~~~s~sK 210 (398)
T 2rfv_A 149 --ETKVVYIETPANPTLSLVD---IETVAGIAHQQGALLVVDNTFMSPYCQQ----PL----Q-----LGADIVVHSVTK 210 (398)
T ss_dssp --TEEEEEEESSBTTTTBCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC----GG----G-----GTCSEEEEETTT
T ss_pred --CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC----ch----h-----hCCcEEEEeCcc
Confidence 7899999999999999999 9999999999999999999998765421 11 1 356788999999
Q ss_pred cCCCCCceE-EEEeecCHHHHH-HHHHhhcc---cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 019899 175 DLSLPGFRT-GVIYSYNESVLA-AAKKLTRF---CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL 249 (334)
Q Consensus 175 ~~~~~g~r~-g~i~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 249 (334)
+++.+|.|+ ||+++ ++++.+ .++..... ++.++..+.++...++.. ..++ +++.++.+.+.+.|++.
T Consensus 211 ~~~~~g~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~----~~~~~~~~~l~~~l~~~ 282 (398)
T 2rfv_A 211 YINGHGDVIGGIIVG-KQEFIDQARFVGLKDITGGCMSPFNAWLTLRGVKTL---GIRM----ERHCENALKIARFLEGH 282 (398)
T ss_dssp TTTCSSCCCCEEEEE-CHHHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHTTH---HHHH----HHHHHHHHHHHHHHHTC
T ss_pred cccCCCCceEEEEEE-CHHHHHHHHHHHHHhCCCCCCCHHHHHHHHhhhhhH---HHHH----HHHHHHHHHHHHHHHcC
Confidence 998899998 99998 667665 56544333 367788888888887653 2222 23444555666666553
Q ss_pred C---------------CcccCC---CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCC----------
Q 019899 250 G---------------IRCSES---SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHC---------- 301 (334)
Q Consensus 250 g---------------~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---------- 301 (334)
+ +++..+ ..+.+++++++.. ..+...+... ++..|+.+.+|..++.
T Consensus 283 ~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~-----~~~~~~l~~~-~~~~~i~~~~G~~~~li~~~~~~~~~ 356 (398)
T 2rfv_A 283 PSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGG-----LEAGRRMINS-VELCLLAVSLGDTETLIQHPASMTHS 356 (398)
T ss_dssp TTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTH-----HHHHHHHHTT-CSSSEECSCCSSSSCEEECHHHHTSS
T ss_pred CCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCC-----HHHHHHHHHh-CCcceeccCCCCcceeeecccccccc
Confidence 2 222221 1344455687642 0112233333 2334788888865320
Q ss_pred -----------CCCCeEEEEecC-CCcccHHHHHHHHHH
Q 019899 302 -----------IEPGWFRCCFTS-LTHEDIPLVIERIQK 328 (334)
Q Consensus 302 -----------~~~~~iRi~~~~-~~~~~l~~~l~~l~~ 328 (334)
..++.+|+|++. .++++++++.+.|++
T Consensus 357 ~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 395 (398)
T 2rfv_A 357 PVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRK 395 (398)
T ss_dssp SSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Confidence 125799999995 356666666666654
No 128
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.97 E-value=6.5e-30 Score=230.28 Aligned_cols=282 Identities=15% Similarity=0.116 Sum_probs=203.1
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChh-hhhhhccCcE------------EEEE
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLA--DHGNALLVPSPYYPGFD-RDIRFRTGVE------------LIPV 69 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~-~~~~~~~g~~------------v~~v 69 (334)
+++.+++.++++++++++++|+++++..++.++. .+||+|++++|+|++.. ..+. ..|.+ +..+
T Consensus 92 l~~~la~~~~~~~~~v~~~~gg~~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~-~~g~~~~~~~~~p~~~~~~~~ 170 (395)
T 1vef_A 92 FYRTLTAILPPELNRVFPVNSGTEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLS-VTWEPKYREPFLPLVEPVEFI 170 (395)
T ss_dssp HHHHHHHTSCTTEEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHH-TCCCHHHHGGGCSCSSCEEEE
T ss_pred HHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhhh-hcCCcccccccCCCCCCeeEe
Confidence 4444555555678899999999999999998763 57889999999987644 3555 55654 3333
Q ss_pred eCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEEEEeccccccccCCCC
Q 019899 70 HCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHVISDEIYGGSIFGNEE 148 (334)
Q Consensus 70 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~ 148 (334)
+ ..|++++++++++ ++++|+++.++||||.+. +.+++++|.++|++||+++|+||+|+++.+.+..
T Consensus 171 ~-------~~d~~~l~~~i~~------~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~ 237 (395)
T 1vef_A 171 P-------YNDVEALKRAVDE------ETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKR 237 (395)
T ss_dssp C-------TTCHHHHHHHCCT------TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS
T ss_pred C-------CCcHHHHHHHhcc------CEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCch
Confidence 3 1489999998874 788777655588999875 6788999999999999999999999975544432
Q ss_pred cchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHH--hhcccCCChHHHHHHHHhhCChHHHHH
Q 019899 149 FVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKK--LTRFCSISAPTQRLLISMLSDTKFIQE 226 (334)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~ 226 (334)
. .+. ..+ . ... ++ |+||+++ .|+|+||+++ ++++.+.+.. ....++.+++.+.++..+++..+ +
T Consensus 238 ~-~~~-~~~---~-~~d-~~--s~sK~~~-~g~~~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~---~ 303 (395)
T 1vef_A 238 F-AFE-HFG---I-VPD-IL--TLAKALG-GGVPLGVAVM-REEVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLE---R 303 (395)
T ss_dssp S-THH-HHT---C-CCS-EE--EECGGGG-TTSSCEEEEE-EHHHHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHH---H
T ss_pred h-Hhh-hcC---C-CCC-EE--EEccccc-CCCceEEEEe-hHHHHhhhccCCcCCCcCCCHHHHHHHHHHHHHHH---h
Confidence 1 111 111 1 122 22 8899998 4999999999 6667766654 23345677788877777765322 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCccc--CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCC
Q 019899 227 YLETNKRRIKKLYDSFVAGLKQLGIRCS--ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEP 304 (334)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~ 304 (334)
....++++++++++.+.|++.+.+.. .+..|.++|++++.. ..++...|++++||.+.|+. +
T Consensus 304 --~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~l~~~l~~~~gi~v~~~~------~ 367 (395)
T 1vef_A 304 --TRLWERAAELGPWFMEKLRAIPSPKIREVRGMGLMVGLELKEK--------AAPYIARLEKEHRVLALQAG------P 367 (395)
T ss_dssp --HTTHHHHHHHHHHHHHHHHTSCCTTEEEEEEETTEEEEEESSC--------SHHHHHHHHHHHCEECEESS------T
T ss_pred --CCHHHHHHHHHHHHHHHHHHhhcCceEEEEEEEEEEEEEEcCh--------HHHHHHHHHHHCCeEEecCC------C
Confidence 34567788888999999988754321 223456788888742 25788886636899998852 5
Q ss_pred CeEEEEecC-CCcccHHHHHHHHHHHH
Q 019899 305 GWFRCCFTS-LTHEDIPLVIERIQKVA 330 (334)
Q Consensus 305 ~~iRi~~~~-~~~~~l~~~l~~l~~~~ 330 (334)
+++|++++. .+++++++++++|++++
T Consensus 368 ~~iRi~~~~~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 368 TVIRFLPPLVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp TEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 789999874 68999999999999876
No 129
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.97 E-value=2.1e-29 Score=227.77 Aligned_cols=276 Identities=14% Similarity=0.124 Sum_probs=202.2
Q ss_pred CCcEEEecCcHHHHHHHHHHhcC-------CC-CeEEecCCCCCChhhhhhhccC------------cEEEEEeCCCCCC
Q 019899 17 PSQIVLTAGATPAVEILCFCLAD-------HG-NALLVPSPYYPGFDRDIRFRTG------------VELIPVHCRSTDN 76 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~~-------~g-d~vl~~~p~~~~~~~~~~~~~g------------~~v~~v~~~~~~~ 76 (334)
.+++++++|+++++..++..+.. +| |+|++++|+|+++........+ .++..+|.
T Consensus 96 ~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 170 (406)
T 4adb_A 96 ADRVFFCNSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY----- 170 (406)
T ss_dssp CSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT-----
T ss_pred CCeEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC-----
Confidence 45999999999999999998864 55 9999999999988654441222 24444442
Q ss_pred ccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCC--CHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhh
Q 019899 77 FAFSITALDQAFNQARKRGVKVRGILICNPANPVGNII--PRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAE 154 (334)
Q Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~--~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~ 154 (334)
.|+++|++++++ ++++|+++ |+||+|.++ +.+++++|.++|++||++||+||+|+++.+.+... ....
T Consensus 171 --~d~~~l~~~l~~------~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~ 240 (406)
T 4adb_A 171 --NDINSASALIDD------STCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELY-AYMH 240 (406)
T ss_dssp --TCHHHHHTTCST------TEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHH
T ss_pred --CcHHHHHHHhcC------CeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhH-HHHh
Confidence 378999988874 78988888 999999988 99999999999999999999999999876655432 2222
Q ss_pred hhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh--cccCCChHHHHHHHHhhCChHHHHHHHHHHH
Q 019899 155 ILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT--RFCSISAPTQRLLISMLSDTKFIQEYLETNK 232 (334)
Q Consensus 155 ~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 232 (334)
.. . ..+++ |+||.++ +|+|+||+++ ++++.+.+.... ..++.+++.+.++..+++..+. .+..
T Consensus 241 ~~----~-~~d~~---t~sK~~~-~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-----~~~~ 305 (406)
T 4adb_A 241 YG----V-TPDLL---TTAKALG-GGFPVGALLA-TEECARVMTVGTHGTTYGGNPLASAVAGKVLELINT-----PEML 305 (406)
T ss_dssp HT----C-CCSEE---EECGGGG-TTSCCEEEEE-CHHHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSS-----HHHH
T ss_pred cC----C-CCCEE---Eechhhc-CCCCeEEEEE-cHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHh-----cCHH
Confidence 21 1 22322 6799999 9999999998 888888776543 3467788888888877653211 3455
Q ss_pred HHHHHHHHHHHHHHHhCCCc----ccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEE
Q 019899 233 RRIKKLYDSFVAGLKQLGIR----CSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFR 308 (334)
Q Consensus 233 ~~~~~~~~~~~~~l~~~g~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iR 308 (334)
++++++++++.+.|++.+.. ...+..|.++|+.++.... .+..++...|++ +||.+.|+. ++++|
T Consensus 306 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~l~~-~gi~v~~~~------~~~iR 374 (406)
T 4adb_A 306 NGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCVLNADYA----GQAKQISQEAAK-AGVMVLIAG------GNVVR 374 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEECTTTT----TCHHHHHHHHHH-TTEECEESS------TTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEEEEEEEeCCcH----HHHHHHHHHHHH-CCcEEeecC------CCeEE
Confidence 66777777777777664211 1122246678888876421 134678888555 699998854 57899
Q ss_pred EEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 309 CCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 309 i~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
++++. .+++++++++++|++++++.
T Consensus 375 i~~~~~~~~e~i~~~~~~l~~~l~~~ 400 (406)
T 4adb_A 375 FAPALNVSEEEVTTGLDRFAAACEHF 400 (406)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 97664 69999999999999998763
No 130
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7e-30 Score=236.84 Aligned_cols=297 Identities=13% Similarity=0.089 Sum_probs=210.5
Q ss_pred hhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcC-----CC---CeEEecCCCCCChhhhhhhccCcEEEEEeCCCC
Q 019899 3 GFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLAD-----HG---NALLVPSPYYPGFDRDIRFRTGVELIPVHCRST 74 (334)
Q Consensus 3 ~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~-----~g---d~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~ 74 (334)
+++.+.++ ...+++++++++|+++++..++.++.+ +| |+|+++.|+|+++...+. ..|.+++.+|+++
T Consensus 114 ~~la~~~g--~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~~~h~~~~~~~~-~~G~~~~~v~~~~- 189 (497)
T 3mc6_A 114 SMVLRMFN--APSDTGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAGFDKAAY-YFGMKLRHVELDP- 189 (497)
T ss_dssp HHHHHHTT--CCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEETTSCHHHHHHHH-HSCCEEEEECBCT-
T ss_pred HHHHHHhC--CCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCccHHHHHHHH-HcCCeEEEEecCc-
Confidence 44554444 323378999999999999999998854 45 899999999999999998 8999999999853
Q ss_pred CCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccC-----CCCc
Q 019899 75 DNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFG-----NEEF 149 (334)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~-----~~~~ 149 (334)
+++.+|+++|++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+.+..+ +...
T Consensus 190 ~~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~ 260 (497)
T 3mc6_A 190 TTYQVDLGKVKKFINK------NTVLLVGSAPNFPHGIADD---IEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKN 260 (497)
T ss_dssp TTCSBCTTTTGGGCCS------SEEEEEEETTCTTTCCCCS---CTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCS
T ss_pred ccCcCCHHHHHHHHhh------CCEEEEEECCCCCCCcCCC---HHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccC
Confidence 3678999999999975 7899999999999999999 889999999999999999999864321 1111
Q ss_pred chhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhccc------------CCChHHHHHHHHh
Q 019899 150 VSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFC------------SISAPTQRLLISM 217 (334)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~ 217 (334)
.+..... ..+.++++.|++|+++ .|.++|+++++++.+..........+ +.+.....++..+
T Consensus 261 ~~~~~~~-----~~g~d~~~~s~~K~l~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aa 334 (497)
T 3mc6_A 261 LPLLDFR-----VPGVTSISCDTHKYGF-APKGSSVIMYRNSDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWAT 334 (497)
T ss_dssp CCCCSTT-----STTCCEEEEETTTTTC-CCSSCEEEECSSHHHHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHH
T ss_pred Ccccccc-----CCCCcEEEECchhhcC-CCCCceeEEecCHHHHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHH
Confidence 1001111 1456788889999874 67789999986655443211111111 0111112222222
Q ss_pred hCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcC
Q 019899 218 LSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL--GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTP 295 (334)
Q Consensus 218 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~ 295 (334)
+.... ...+.+..++..++++++.+.|++. |+++..+..+.++++..+. .+..++.+.|. ++||.+.+
T Consensus 335 l~~l~--~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~v~~~~~~-------~~~~~l~~~L~-~~Gi~v~~ 404 (497)
T 3mc6_A 335 MVNMG--ENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYSVISFSSKT-------LNIHELSDRLS-KKGWHFNA 404 (497)
T ss_dssp HHHHH--HHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSSEEEEECTT-------TTHHHHHHHHH-TTTCBCEE
T ss_pred HHHHh--HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCeeEEEEeCCC-------CCHHHHHHHHH-hCCEEEec
Confidence 22111 3345677788888999999999994 8887754444444455432 13467888855 47998876
Q ss_pred CCCcCCCCCCeEEEEecCCCcccHHHHHHHHHHHHHHc
Q 019899 296 GSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 296 g~~~~~~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
+.. +..+|++++..+++++++++++|++++++.
T Consensus 405 ~~~-----~~~~ri~~~~~t~e~i~~~~~~L~~~l~~~ 437 (497)
T 3mc6_A 405 LQK-----PVALHMAFTRLSAHVVDEICDILRTTVQEL 437 (497)
T ss_dssp CCS-----SCCEEEECCTTTTCTHHHHHHHHHHHHHHH
T ss_pred CCC-----CCeEEEEEeCCCHHHHHHHHHHHHHHHHHH
Confidence 543 346899988679999999999999998764
No 131
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.97 E-value=9e-29 Score=226.18 Aligned_cols=281 Identities=16% Similarity=0.178 Sum_probs=196.0
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhh----hhhccCcEEEEEeCCCCCCc
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRD----IRFRTGVELIPVHCRSTDNF 77 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~~g~~v~~v~~~~~~~~ 77 (334)
++++.+..+ .+++++++++++++..++. ++++||+|+++.|+|+++... ++ ..|.+++.++..
T Consensus 139 ~~~la~~~g------~~~~i~~~sGt~al~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~-~~G~~v~~v~~~----- 205 (464)
T 1ibj_A 139 ESLLAKLDK------ADRAFCFTSGMAALSAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVP-RSGVVVKRVNTT----- 205 (464)
T ss_dssp HHHHHHHHT------CSEEEEESSHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTSG-GGTCEEEEECTT-----
T ss_pred HHHHHHHhC------CCeEEEECCHHHHHHHHHH-HhCCCCEEEEECCCchhHHHHHHHHHH-HcCCEEEEeCCC-----
Confidence 345555444 2478888888999988875 788999999999999998764 34 679999999862
Q ss_pred cccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhh
Q 019899 78 AFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILE 157 (334)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~ 157 (334)
|++++++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|.... ...++ .
T Consensus 206 --d~~~l~~~i~~------~tk~v~l~~p~NptG~v~~---l~~i~~la~~~gi~livDea~~~g~----~~~~~----~ 266 (464)
T 1ibj_A 206 --KLDEVAAAIGP------QTKLVWLESPTNPRQQISD---IRKISEMAHAQGALVLVDNSIMSPV----LSRPL----E 266 (464)
T ss_dssp --SHHHHHHHCCS------SEEEEEECSSCTTTCCCCC---HHHHHHHHHTTTCEEEEECTTTCTT----TCCGG----G
T ss_pred --CHHHHHHHhcc------CceEEEEeCCCCCCCEeec---HHHHHHHHHHcCCEEEEECCCcccc----cCChh----h
Confidence 78999998875 8999999999999999998 9999999999999999999997521 11111 1
Q ss_pred ccccCCCcEEEEecccccCCC-CCceEEEEeecCHHHHHHHHHhhc--ccCCChHHHHHHHHhhCChHHHHHHHHHHHHH
Q 019899 158 AEEVDKDRVHIIYGLSKDLSL-PGFRTGVIYSYNESVLAAAKKLTR--FCSISAPTQRLLISMLSDTKFIQEYLETNKRR 234 (334)
Q Consensus 158 ~~~~~~~~~~~~~s~sK~~~~-~g~r~g~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 234 (334)
.+.++++.|+||+++. .|+++||++++++++.+.+..... .++.++..+.++...++.... .+++....
T Consensus 267 -----~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l~~~~~~~g~~~~~~~~~a~~~al~~~~~---r~~~~~~~ 338 (464)
T 1ibj_A 267 -----LGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTMAL---RIEKQQEN 338 (464)
T ss_dssp -----TTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCBCCHHHHHHHHHHHTTHHH---HHHHHHHH
T ss_pred -----cCCEEEEECCcccccCCCCCcEEEEEEChHHHHHHHHHHHHhcCCCCCHHHHHHHHhchhhHHH---HHHHHHHH
Confidence 4678899999999864 488999999965788888876553 345677788877777765321 12222222
Q ss_pred HHHHHHHHHH----------HHHhC-CCcccCCC---ceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCC---
Q 019899 235 IKKLYDSFVA----------GLKQL-GIRCSESS---AGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGS--- 297 (334)
Q Consensus 235 ~~~~~~~~~~----------~l~~~-g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~--- 297 (334)
.....+++.+ .|+++ ++++..+. .|.+++++++. ......+.+. ++..||.+.+|.
T Consensus 339 ~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~~------~~~~~~~~~~-L~~~gi~v~~G~~~s 411 (464)
T 1ibj_A 339 ARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGS------VALSKHLVET-TKYFSIAVSFGSVKS 411 (464)
T ss_dssp HHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSC------HHHHHHHHHH-CSSSEECSCCCSSSC
T ss_pred HHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEECC------HHHHHHHHHh-cCcceEeecCCCCce
Confidence 2222222221 22222 33333332 23466777742 1122346666 455799888885
Q ss_pred ---------CcCC---------CCCCeEEEEecCCCcccHHHHHHHHHHHHHH
Q 019899 298 ---------ACHC---------IEPGWFRCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 298 ---------~~~~---------~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
.++. ..++++|++++ . +++++++++|++++++
T Consensus 412 l~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg-~--edi~~li~~L~~al~~ 461 (464)
T 1ibj_A 412 LISMPCFMSHASIPAEVREARGLTEDLVRISAG-I--EDVDDLISDLDIAFKT 461 (464)
T ss_dssp EEECTTTTTTCSCCSSSSSSSSCCTTCEEEECC-S--SCHHHHHHHHHHHHHS
T ss_pred eeecccccccccCCHHHHHhcCCCcCeEEEEeC-C--CCHHHHHHHHHHHHhh
Confidence 1211 12578999999 3 9999999999999875
No 132
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.97 E-value=1.3e-29 Score=224.41 Aligned_cols=280 Identities=17% Similarity=0.156 Sum_probs=191.4
Q ss_pred CcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhh---hhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 18 SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDR---DIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~---~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
+++++++|+++++.+++.++.++||+|+++.|+|.+... ... ..|.+++.+ . ++++.+|++++++++++....
T Consensus 54 ~~~~~~~~gt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~-~~g~~~~~v-~--~~~~~~d~~~l~~~i~~~~~~ 129 (347)
T 1jg8_A 54 EAALFVPSGTMGNQVSIMAHTQRGDEVILEADSHIFWYEVGAMAV-LSGVMPHPV-P--GKNGAMDPDDVRKAIRPRNIH 129 (347)
T ss_dssp SEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCHHHHSSTTHHHH-HTCCEEEEE-C--EETTEECHHHHHHHSCCSCTT
T ss_pred ceEEEecCcHHHHHHHHHHhcCCCCEEEEcCcchhhhccccchhh-ccCeEEEEe-c--CCCCccCHHHHHHHhcccccc
Confidence 478888999999999999999999999999999976443 345 679998888 3 334568999999988631000
Q ss_pred CCceeEEEEeCCCCCc-ccCCCHHHHHHHHHHHHhcCcEEEEeccccccc--cCCCCcchhhhhhhccccCCCcEEEEec
Q 019899 95 GVKVRGILICNPANPV-GNIIPRETLYELLDFAREKNIHVISDEIYGGSI--FGNEEFVSMAEILEAEEVDKDRVHIIYG 171 (334)
Q Consensus 95 ~~~~~~i~~~~p~npt-G~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s 171 (334)
..++++|++++|+||| |.++|.+++++|+++|+++|++|++|++|..+. +.+. +...+.. ..+ .++.|
T Consensus 130 ~~~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~---~~~~~~~----~~d--~~~~s 200 (347)
T 1jg8_A 130 FPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGV---PVKEYAG----YAD--SVMFC 200 (347)
T ss_dssp SCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCC---CHHHHHH----TCS--EEEEE
T ss_pred ccCceEEEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCC---ChHHhcc----ccc--EEEEe
Confidence 1268999999999999 999999999999999999999999999864311 1121 2222221 023 34458
Q ss_pred ccccCCCCCceEE-EEeecCHHHHHHHHHhhcccC----CChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019899 172 LSKDLSLPGFRTG-VIYSYNESVLAAAKKLTRFCS----ISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGL 246 (334)
Q Consensus 172 ~sK~~~~~g~r~g-~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 246 (334)
+||+++++ +| +++. ++++++.+......++ .+...+.+....++. ....+. +..++++++.+.|
T Consensus 201 ~sK~l~~~---~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~~-~~~~~~~~l~~~L 269 (347)
T 1jg8_A 201 LSKGLCAP---VGSVVVG-DRDFIERARKARKMLGGGMRQAGVLAAAGIIALTK------MVDRLK-EDHENARFLALKL 269 (347)
T ss_dssp SSSTTCCS---SCEEEEE-CHHHHHHHHHHHHHHTCCCSSTHHHHHHHHHHHHH------SSTTHH-HHHHHHHHHHHHH
T ss_pred cccccCCC---ceEEEEc-CHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHH------HHHHHH-HHHHHHHHHHHHH
Confidence 99999743 46 4555 8888877765543332 233333333333321 111111 1234567777778
Q ss_pred HhCCCccc-CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHH
Q 019899 247 KQLGIRCS-ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIE 324 (334)
Q Consensus 247 ~~~g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~ 324 (334)
++.|+++. .+..+.++|++++... .+..++.+.|. ++||.+.++. ++++|++++. .++++++++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~-~~gi~v~~~~------~~~iRl~~~~~~~~e~i~~~~~ 337 (347)
T 1jg8_A 270 KEIGYSVNPEDVKTNMVILRTDNLK-----VNAHGFIEALR-NSGVLANAVS------DTEIRLVTHKDVSRNDIEEALN 337 (347)
T ss_dssp HHHTCBCCGGGCCSSEEEEECTTSS-----SCHHHHHHHHH-HHTEECEEEE------TTEEEEECCTTSCHHHHHHHHH
T ss_pred HhcCceeccCCCcceEEEEEccccc-----CCHHHHHHHHH-HCCCEEecCC------CCeEEEEeCCCCCHHHHHHHHH
Confidence 77676642 2334556888887410 13467888865 5899998742 4689999863 69999999999
Q ss_pred HHHHHHHHc
Q 019899 325 RIQKVAETC 333 (334)
Q Consensus 325 ~l~~~~~~~ 333 (334)
+|++++++.
T Consensus 338 ~l~~~l~~~ 346 (347)
T 1jg8_A 338 IFEKLFRKF 346 (347)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 999998753
No 133
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.97 E-value=5.8e-29 Score=227.99 Aligned_cols=305 Identities=13% Similarity=0.097 Sum_probs=201.8
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc-----C---CCCeEEecCCCCCChhhhhhhccC----------
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLA-----D---HGNALLVPSPYYPGFDRDIRFRTG---------- 63 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~-----~---~gd~vl~~~p~~~~~~~~~~~~~g---------- 63 (334)
++++.+..+ .+.+ |++|+|+++|+..++..+. . ++++|++.+|+|+++........|
T Consensus 97 a~~l~~~~~----~~~~-v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 171 (452)
T 3n5m_A 97 AEKLNEWLG----GEYV-IFFSNSGSEANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEP 171 (452)
T ss_dssp HHHHHHHHT----SCEE-EEEESSHHHHHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCC
T ss_pred HHHHHHhCC----CCce-EEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCC
Confidence 455555443 3445 9999999999999999886 5 789999999999876543331211
Q ss_pred --cEEEEEeCCCCCCcc----------ccHHHHHHHHHHHHHcCCceeEEEEeCC-CCCcccCC-CHHHHHHHHHHHHhc
Q 019899 64 --VELIPVHCRSTDNFA----------FSITALDQAFNQARKRGVKVRGILICNP-ANPVGNII-PRETLYELLDFAREK 129 (334)
Q Consensus 64 --~~v~~v~~~~~~~~~----------~~~~~l~~~l~~~~~~~~~~~~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~ 129 (334)
..+..++..+..... .++++|++++++. +..++++|+++.+ +| ||.+. +.+.+++|.++|++|
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~ 248 (452)
T 3n5m_A 172 FASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWE--LSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKH 248 (452)
T ss_dssp CCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHH--CGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHH
T ss_pred CCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhc--CCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHc
Confidence 124444432111111 1289999998721 1126777777777 89 99776 778899999999999
Q ss_pred CcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHH--------h
Q 019899 130 NIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKK--------L 200 (334)
Q Consensus 130 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~--------~ 200 (334)
|+++|+||+|.++.+.|..+. .. . .+....+.++||.++ .| +|+||+++ ++++++.+.. .
T Consensus 249 ~~llI~DEv~~g~g~~g~~~~-~~-~-------~~~~~di~t~sK~l~-~G~~~ig~~~~-~~~i~~~~~~~~~~~~~~~ 317 (452)
T 3n5m_A 249 GALLISDEVICGFGRTGKAFG-FM-N-------YDVKPDIITMAKGIT-SAYLPLSATAV-KREIYEAFKGKGEYEFFRH 317 (452)
T ss_dssp TCEEEEECTTTTTTTTSSSSG-GG-G-------TTCCCSEEEECGGGG-TTSSCCEEEEE-EHHHHGGGCSSSTTCSCCC
T ss_pred CCEEEEecchhCCCcccccch-hh-h-------cCCCCCEEeeccccc-CCCcceEEEEE-CHHHHHHHhhccCCCCccc
Confidence 999999999998766554221 11 1 111222347899998 59 99999998 8888888743 2
Q ss_pred hcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHh----CC-CcccCCCceeEEeeecCCcCCCC--
Q 019899 201 TRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQ----LG-IRCSESSAGLYCWADMSGLIPSY-- 273 (334)
Q Consensus 201 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~g-~~~~~~~~g~~~~~~~~~~~~~~-- 273 (334)
...++.+++++.++.++++..+ + +...++++++.+++.+.|++ ++ +....+. |.++++++.......
T Consensus 318 ~~t~~~~~~~~aaa~aal~~~~---~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~ 391 (452)
T 3n5m_A 318 INTFGGNPAACALALKNLEIIE---N--ENLIERSAQMGSLLLEQLKEEIGEHPLVGDIRGK-GLLVGIELVNDKETKEP 391 (452)
T ss_dssp CCSSTTCHHHHHHHHHHHHHHH---H--TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEES-SSCEEEEEEEETTTTEE
T ss_pred cCCCCCCHHHHHHHHHHHHHHH---h--ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEE-EEEEEEEEecCCcccCC
Confidence 3456778888888888775422 1 22334445555555555544 32 2223333 445566664322111
Q ss_pred -ChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 274 -SEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 274 -~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
......++...++ ++||.+.|+..|....++++||+++. .+++++++++++|++++++
T Consensus 392 ~~~~~~~~~~~~l~-~~Gv~~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 451 (452)
T 3n5m_A 392 IDNDKIASVVNACK-EKGLIIGRNGMTTAGYNNILTLAPPLVISSEEIAFVIGTLKTAMER 451 (452)
T ss_dssp CCHHHHHHHHHHHH-HTTEECEECTTSSTTCCCEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHH-HCCcEEeecCcccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 0112346777755 47999999887755557899998764 6999999999999999865
No 134
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.97 E-value=9.2e-29 Score=224.23 Aligned_cols=290 Identities=10% Similarity=0.014 Sum_probs=197.9
Q ss_pred hcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhh---hhhhc--cCcEEEEEeCCCCCCccccHHH
Q 019899 9 LGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDR---DIRFR--TGVELIPVHCRSTDNFAFSITA 83 (334)
Q Consensus 9 ~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~---~~~~~--~g~~v~~v~~~~~~~~~~~~~~ 83 (334)
+++.+++++++|++++| ++++..++.+++++||+|+++.|+|.++.. .+. . .+..++.+++ ++++.+|+++
T Consensus 80 la~~~g~~~~~i~~~sG-t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~--~~~~~~d~~~ 155 (417)
T 3n0l_A 80 CKKLFNCKFANVQPNSG-SQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVS-SSGKMYESCFYGV--ELDGRIDYEK 155 (417)
T ss_dssp HHHHHTCSEEECCCSSH-HHHHHHHHHHHSCTTCEEEEECC-----------------CCSEEEEECC--CTTSSCCHHH
T ss_pred HHHHhCCCCcceEeccH-HHHHHHHHHHhcCCCCEEEecccccccccchhhhhh-hhcceeeeEeccC--CCCCCcCHHH
Confidence 33334566777888777 799999999999999999999999987655 223 3 3345566665 3566799999
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccc-cccCCCCcchhhhhhhccccC
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGG-SIFGNEEFVSMAEILEAEEVD 162 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~-~~~~~~~~~~~~~~~~~~~~~ 162 (334)
+++++++. ++++|++++|+| |.+.+ +++|.++|++||+++|+|++|.. ..+.+.....+
T Consensus 156 l~~~i~~~-----~~~~v~~~~~~~--G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~---------- 215 (417)
T 3n0l_A 156 VREIAKKE-----KPKLIVCGASAY--ARVID---FAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPF---------- 215 (417)
T ss_dssp HHHHHHHH-----CCSEEEECCSSC--CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCT----------
T ss_pred HHHHHHhc-----CCeEEEECCccc--CccCC---HHHHHHHHHHcCCEEEEECccchhhhhcccCCCcc----------
Confidence 99999853 789898888776 88888 99999999999999999999643 22322211111
Q ss_pred CCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhccc---CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHH
Q 019899 163 KDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFC---SISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLY 239 (334)
Q Consensus 163 ~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (334)
...++++.|+||++ +|.|.||++++++++.+.+......+ +.+...+.++..++.. ...+.+.++++++.+++
T Consensus 216 ~~~di~~~s~sK~l--~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~--~~~~~~~~~~~~~~~~~ 291 (417)
T 3n0l_A 216 PYAHVVSSTTHKTL--RGPRGGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKF--NLSDEWKVYAKQVRTNA 291 (417)
T ss_dssp TTCSEEEEESSTTT--CSCSCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHH--HTSHHHHHHHHHHHHHH
T ss_pred ccceEEEeeCcccc--CCCCeeEEEECCHHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHH--HHhhhHHHHHHHHHHHH
Confidence 23457889999988 67788999995588888887654433 3334444444443322 11234467778888899
Q ss_pred HHHHHHHHhCCCcccC-CCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCC----CCCCeEEEEecC-
Q 019899 240 DSFVAGLKQLGIRCSE-SSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHC----IEPGWFRCCFTS- 313 (334)
Q Consensus 240 ~~~~~~l~~~g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~----~~~~~iRi~~~~- 313 (334)
+++.+.|++.|+++.. +..+.++|++++.... +..++... ++++||.+.++..+.. ..++.+|+++..
T Consensus 292 ~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~ 365 (417)
T 3n0l_A 292 QVLANVLMDRKFKLVSDGTDNHLVLMSFLDREF-----SGKDADLA-LGNAGITANKNTVPGEIRSPFITSGLRLGTPAL 365 (417)
T ss_dssp HHHHHHHHHTTCEEGGGSCSSSEEEEECTTSSS-----CHHHHHHH-HHHTTEECEECCCTTCCSCTTTCSEEEEECHHH
T ss_pred HHHHHHHHhCCceeccCCCCceEEEEEcccCCC-----CHHHHHHH-HHHcCeEEeccccCCCCcccCCCCeeEecCHHH
Confidence 9999999888887654 3345677788764211 23345554 6779999986543321 124679999753
Q ss_pred ----CCcccHHHHHHHHHHHHHH
Q 019899 314 ----LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 314 ----~~~~~l~~~l~~l~~~~~~ 332 (334)
.++++++++++.|++++++
T Consensus 366 ~~~~~~~~~i~~~~~~l~~~l~~ 388 (417)
T 3n0l_A 366 TARGFKEKEMEIVSNYIADILDD 388 (417)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHT
T ss_pred hhCCCCHHHHHHHHHHHHHHHhc
Confidence 4679999999999999864
No 135
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.97 E-value=3.3e-29 Score=228.40 Aligned_cols=303 Identities=14% Similarity=0.101 Sum_probs=201.3
Q ss_pred hhcCCCCCCCCcEEEecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChhhhhhhc-------------cCcEEEEEeCC
Q 019899 8 VLGQAVSFDPSQIVLTAGATPAVEILCFCLA--DHGNALLVPSPYYPGFDRDIRFR-------------TGVELIPVHCR 72 (334)
Q Consensus 8 ~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~-------------~g~~v~~v~~~ 72 (334)
.+++.++.++++|++++|+++++..++..+. .++++|++.+|+|++........ .|...+.++..
T Consensus 93 ~la~~~~~~~~~v~~~~gg~ea~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 172 (433)
T 1zod_A 93 RLANITPPGLDRALLLSTGAESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFT 172 (433)
T ss_dssp HHHHHSCTTCCEEEEESCHHHHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCT
T ss_pred HHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcc
Confidence 3333455678899999999999999998653 34689999999998754432101 23333333321
Q ss_pred CCCCc--------cccHHHHHHHHHHHHHcCCceeEEEEeCC-CCCccc-CCCHHHHHHHHHHHHhcCcEEEEecccccc
Q 019899 73 STDNF--------AFSITALDQAFNQARKRGVKVRGILICNP-ANPVGN-IIPRETLYELLDFAREKNIHVISDEIYGGS 142 (334)
Q Consensus 73 ~~~~~--------~~~~~~l~~~l~~~~~~~~~~~~i~~~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~ 142 (334)
....+ .+|+++|++++++. ...+++ +++++| +||||. ..+.+++++|.++|++||+++|+||+|+++
T Consensus 173 ~~~~~~~~~~~~~~~d~~~le~~l~~~--~~~~~~-~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~ 249 (433)
T 1zod_A 173 YRPRFERNGAYDYLAELDYAFDLIDRQ--SSGNLA-AFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGV 249 (433)
T ss_dssp TSCCCEETTEECHHHHHHHHHHHHHHH--CCSCEE-EEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTT
T ss_pred cccccCCchhhhHHHHHHHHHHHHHhc--CCCCeE-EEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCC
Confidence 11111 24699999998752 112566 455667 688996 567888999999999999999999999987
Q ss_pred ccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh--h--cccCCChHHHHHHHHhh
Q 019899 143 IFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL--T--RFCSISAPTQRLLISML 218 (334)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~l 218 (334)
.+.+... .+. ... . ... +.|+||.++ .|+|+||+++ ++++++.+... . ..++.+++++.++.+++
T Consensus 250 g~~g~~~-~~~-~~~---~-~~d---i~s~sK~~~-~G~~ig~~~~-~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal 318 (433)
T 1zod_A 250 GRTGTMF-ACQ-RDG---V-TPD---ILTLSKTLG-AGLPLAAIVT-SAAIEERAHELGYLFYTTHVSDPLPAAVGLRVL 318 (433)
T ss_dssp TTTSSSS-THH-HHT---C-CCS---EEEECHHHH-TTSSCEEEEE-CHHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHH
T ss_pred CcCchHh-HHh-hcC---C-CCC---EEEeccccc-CCCCeeEEEE-hHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHH
Confidence 6544321 111 111 1 112 348999998 5999999999 78888888762 2 44667888888877777
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CC-cccCCCceeEEeeecCCcCCCC--ChhhHHHHHHHHHHhcCe
Q 019899 219 SDTKFIQEYLETNKRRIKKLYDSFVAGLKQL----GI-RCSESSAGLYCWADMSGLIPSY--SEKGELELWDKLLNIAKI 291 (334)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----g~-~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~ll~~~gi 291 (334)
+..+ + ....++++++++++.+.|+++ +. ....+ .|.++|++++...... ......++...|+ ++||
T Consensus 319 ~~~~---~--~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv 391 (433)
T 1zod_A 319 DVVQ---R--DGLVARANVMGDRLRRGLLDLMERFDCIGDVRG-RGLLLGVEIVKDRRTKEPADGLGAKITRECM-NLGL 391 (433)
T ss_dssp HHHH---H--TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEE-ETTEEEEEEEEETTTTEECTTHHHHHHHHHH-HTTE
T ss_pred HHHH---h--CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEE-EEEEEEEEEecCccccCCChHHHHHHHHHHH-HCCC
Confidence 5321 1 123445556666666666553 22 22233 3566788876421100 0123467888866 5899
Q ss_pred EEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 292 NVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 292 ~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
.+.||..|+ .++++|++++. .+++++++++++|++++++.
T Consensus 392 ~v~~~~~~~--~~~~lRi~~~~~~t~~~i~~~l~~l~~~l~~~ 432 (433)
T 1zod_A 392 SMNIVQLPG--MGGVFRIAPPLTVSEDEIDLGLSLLGQAIERA 432 (433)
T ss_dssp ECCEECCTT--SCCEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred eEeccCCCC--CCCEEEEECCcCCCHHHHHHHHHHHHHHHHHh
Confidence 999987664 25799998764 69999999999999998763
No 136
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.97 E-value=5.6e-29 Score=226.63 Aligned_cols=292 Identities=11% Similarity=0.057 Sum_probs=200.3
Q ss_pred hhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc---C----CCCeEEecCCCCCChhhhhhhccC-------------cEE
Q 019899 7 QVLGQAVSFDPSQIVLTAGATPAVEILCFCLA---D----HGNALLVPSPYYPGFDRDIRFRTG-------------VEL 66 (334)
Q Consensus 7 ~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~---~----~gd~vl~~~p~~~~~~~~~~~~~g-------------~~v 66 (334)
+.+++.+++++++|++++|++++++.++..+. + +||+|++++|+|+++........| .++
T Consensus 93 ~~la~~~~~~~~~v~~~~ggtea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (429)
T 1s0a_A 93 RKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPEN 172 (429)
T ss_dssp HHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCC
T ss_pred HHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCc
Confidence 34444455678999999999999999988653 2 589999999999876442220111 134
Q ss_pred EEEeCCC---CCCc-cccHHHHHHHHHHHHHcCCceeEEEEeCC--CCCccc-CCCHHHHHHHHHHHHhcCcEEEEeccc
Q 019899 67 IPVHCRS---TDNF-AFSITALDQAFNQARKRGVKVRGILICNP--ANPVGN-IIPRETLYELLDFAREKNIHVISDEIY 139 (334)
Q Consensus 67 ~~v~~~~---~~~~-~~~~~~l~~~l~~~~~~~~~~~~i~~~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~vi~D~~~ 139 (334)
..++++. ++.+ .+|++++++++++. ..++++| +++| +||||. ..+.+++++|.++|++||+++|+||+|
T Consensus 173 ~~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v-i~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~ 248 (429)
T 1s0a_A 173 LFAPAPQSRMDGEWDERDMVGFARLMAAH---RHEIAAV-IIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIA 248 (429)
T ss_dssp EEECCCCSBC-CCCCGGGGHHHHHHHHHH---TTTEEEE-EECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTT
T ss_pred eEeCCCcccccccchHHHHHHHHHHHHhC---CCCEEEE-EEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehh
Confidence 4455421 1123 58999999999752 1256655 4556 589996 557888999999999999999999999
Q ss_pred cccccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHHh-------hcccCCChHHH
Q 019899 140 GGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKKL-------TRFCSISAPTQ 211 (334)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~~-------~~~~~~~~~~~ 211 (334)
.++.+.+... .+... . . ..+ +.|+||.++ +| +|+||+++ ++++++.+... ...++.|++.+
T Consensus 249 ~~~g~~g~~~-~~~~~-~---~-~~d---~~t~sK~l~-~G~~~iG~~~~-~~~~~~~l~~~~~~~~~~~~t~~~n~~~~ 317 (429)
T 1s0a_A 249 TGFGRTGKLF-ACEHA-E---I-APD---ILCLGKALT-GGTMTLSATLT-TREVAETISNGEAGCFMHGPTFMGNPLAC 317 (429)
T ss_dssp TTTTTTSSSS-GGGGG-T---C-CCS---EEEECGGGG-TSSSCCEEEEE-CHHHHHHHHTSTTSSCSCCCTTTTCHHHH
T ss_pred hCCcccchHH-Hhhhc-C---C-CCC---EEEeccccc-CCCccceEEEe-CHHHHHHhhcCCCcccccCCCCCCCHHHH
Confidence 8765544321 11111 1 1 122 237899998 68 99999998 78888888752 23456788888
Q ss_pred HHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHH
Q 019899 212 RLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL----GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLN 287 (334)
Q Consensus 212 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 287 (334)
.++.++++..+ + ....++++++++++.+.|+++ ++....+ .|.++|++++... +..++...|+
T Consensus 318 ~a~~aal~~~~---~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~-~g~~~~~~~~~~~------~~~~l~~~l~- 384 (429)
T 1s0a_A 318 AAANASLAILE---S--GDWQQQVADIEVQLREQLAPARDAEMVADVRV-LGAIGVVETTHPV------NMAALQKFFV- 384 (429)
T ss_dssp HHHHHHHHHHH---T--CHHHHHHHHHHHHHHHHHGGGGGCTTEEEEEE-ETTEEEEEESSCB------CHHHHHHHHH-
T ss_pred HHHHHHHHHHH---h--CCHHHHHHHHHHHHHHHHHHHhcCCCEEEEEE-eeEEEEEEECCcc------cHHHHHHHHH-
Confidence 88877775321 1 134456667778888888764 2222233 3457888887532 2457888866
Q ss_pred hcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 288 IAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 288 ~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
++||.+.|. .+++|++++. .+++++++++++|+++++++
T Consensus 385 ~~Gi~v~~~-------~~~iRis~~~~~t~e~i~~~~~~l~~~~~~~ 424 (429)
T 1s0a_A 385 EQGVWIRPF-------GKLIYLMPPYIILPQQLQRLTAAVNRAVQDE 424 (429)
T ss_dssp HTTEECCCB-------TTEEEECCCTTCCHHHHHHHHHHHHHHTSSG
T ss_pred HCCCEEecc-------CCEEEEECCCCCCHHHHHHHHHHHHHHHHhh
Confidence 589999873 2689999774 69999999999999987654
No 137
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.96 E-value=4.2e-29 Score=226.44 Aligned_cols=278 Identities=13% Similarity=0.078 Sum_probs=202.0
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc------CCCCe-EEecCCCCCChhhhhhh---cc--CcEEEEEeCC
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLA------DHGNA-LLVPSPYYPGFDRDIRF---RT--GVELIPVHCR 72 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~------~~gd~-vl~~~p~~~~~~~~~~~---~~--g~~v~~v~~~ 72 (334)
+++.+++.+++++++|++|+|+++++..++.++. ++||+ |+++.++|+++...+.. .. |.+++.+++
T Consensus 76 l~~~la~~~g~~~~~v~~~~g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~- 154 (416)
T 1qz9_A 76 LGNRLATLIGARDGEVVVTDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS- 154 (416)
T ss_dssp HHHHHHTTTTCCTTSEEECSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS-
T ss_pred HHHHHHHHcCCCcccEEEeCChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc-
Confidence 4566677778888899999999999998888776 88987 55555678766554330 23 889988884
Q ss_pred CCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchh
Q 019899 73 STDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSM 152 (334)
Q Consensus 73 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~ 152 (334)
++++++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+.. ....++
T Consensus 155 --------~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g----~~~~~~ 213 (416)
T 1qz9_A 155 --------PEELPQAIDQ------DTAVVMLTHVNYKTGYMHD---MQALTALSHECGALAIWDLAHSAG----AVPVDL 213 (416)
T ss_dssp --------GGGHHHHCST------TEEEEEEESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTT----TSCCCH
T ss_pred --------HHHHHHHhCC------CceEEEEeccccCcccccC---HHHHHHHHHHcCCEEEEEcccccc----CcCCCh
Confidence 6778888764 7899999999999999999 899999999999999999999742 222222
Q ss_pred hhhhhccccCCCcEEEEecccccCCCCCceE-EEEeecCHHHHHHHHHhh-------------------------cccCC
Q 019899 153 AEILEAEEVDKDRVHIIYGLSKDLSLPGFRT-GVIYSYNESVLAAAKKLT-------------------------RFCSI 206 (334)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~-g~i~~~~~~~~~~~~~~~-------------------------~~~~~ 206 (334)
.. .+.++++.|++|+++ +|.++ |++++ ++++.+.++... ..++.
T Consensus 214 ~~--------~~~d~~~~s~~K~l~-~g~~~~g~l~~-~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (416)
T 1qz9_A 214 HQ--------AGADYAIGCTYKYLN-GGPGSQAFVWV-SPQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQ 283 (416)
T ss_dssp HH--------HTCSEEEECSSSTTC-CCTTCCCEEEE-CTTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCC
T ss_pred hh--------cCCCEEEecCcccCC-CCCCCeEEEEE-CHHHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCC
Confidence 22 234578889999985 66677 99998 666655544310 11234
Q ss_pred ChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CCcccCCC----ceeEEeeecCCcCCCCChhhH
Q 019899 207 SAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL----GIRCSESS----AGLYCWADMSGLIPSYSEKGE 278 (334)
Q Consensus 207 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~ 278 (334)
+...+.++..+++... ++.+.+..++++++++++.+.|++. |+++..+. .+.++|++++. .
T Consensus 284 ~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~ 352 (416)
T 1qz9_A 284 PITSLAMVECGLDVFA--QTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHPE---------G 352 (416)
T ss_dssp CHHHHHHHHHHHHHHT--TSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECTT---------H
T ss_pred CHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecCC---------H
Confidence 5555555555543211 1234667778888899999999886 78876653 24567888763 3
Q ss_pred HHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEec--CCCcccHHHHHHHHHHHHHH
Q 019899 279 LELWDKLLNIAKINVTPGSACHCIEPGWFRCCFT--SLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 279 ~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~--~~~~~~l~~~l~~l~~~~~~ 332 (334)
.++...|. ++||.+... .++++|++++ ..+++++++++++|++++++
T Consensus 353 ~~l~~~l~-~~gi~~~~~------~~~~lRis~~~~~~t~~~i~~~~~~l~~~~~~ 401 (416)
T 1qz9_A 353 YAVIQALI-DRGVIGDYR------EPRIMRFGFTPLYTTFTEVWDAVQILGEILDR 401 (416)
T ss_dssp HHHHHHHH-TTTEECEEE------TTTEEEEECCTTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-hCCcEeccC------CCCeEEEeCcccCCCHHHHHHHHHHHHHHHhc
Confidence 57777755 579987431 2578999997 36999999999999999875
No 138
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.96 E-value=5.2e-29 Score=226.06 Aligned_cols=274 Identities=14% Similarity=0.104 Sum_probs=197.6
Q ss_pred CCcEEEecCcHHHHHHHHHHhcC-------CC-CeEEecCCCCCChhhh-hhhccCcE------------EEEEeCCCCC
Q 019899 17 PSQIVLTAGATPAVEILCFCLAD-------HG-NALLVPSPYYPGFDRD-IRFRTGVE------------LIPVHCRSTD 75 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~~-------~g-d~vl~~~p~~~~~~~~-~~~~~g~~------------v~~v~~~~~~ 75 (334)
.+++++++|+++|+..++..+.. +| ++|++++|+|+++... +. ..|.+ +..++.
T Consensus 114 ~~~v~~~~ggteA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~-~~g~~~~~~~~~p~~~~~~~~~~---- 188 (420)
T 2pb2_A 114 AERVLFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVS-VGGQPKYSDGFGPKPADIIHVPF---- 188 (420)
T ss_dssp CSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHH-HSSCHHHHTTSSSCCSCEEEECT----
T ss_pred CCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHH-hcCCccccccCCCCCCCeEEecC----
Confidence 57999999999999999998864 56 5899999999876543 33 44533 555553
Q ss_pred CccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCccc-CCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhh
Q 019899 76 NFAFSITALDQAFNQARKRGVKVRGILICNPANPVGN-IIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAE 154 (334)
Q Consensus 76 ~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~-~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~ 154 (334)
.|+++|++++++ ++++|+++.++|++|. +++.+++++|.++|++||+++|+||+|.++.+.+..+ .+..
T Consensus 189 ---~d~~~le~~i~~------~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~-~~~~ 258 (420)
T 2pb2_A 189 ---NDLHAVKAVMDD------HTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLF-AYMH 258 (420)
T ss_dssp ---TCHHHHHHHCCT------TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHH
T ss_pred ---CCHHHHHHHhcc------CceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHH-HHHh
Confidence 278999998875 7898888777888884 6899999999999999999999999998776655432 1111
Q ss_pred hhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHH--hhcccCCChHHHHHHHHhhCChHHHHHHHHHHH
Q 019899 155 ILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKK--LTRFCSISAPTQRLLISMLSDTKFIQEYLETNK 232 (334)
Q Consensus 155 ~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 232 (334)
. + . ..+++ |+||.++ +|+|+||+++ ++++.+.+.. ....++.|++.+.++.+.++..+. ++..
T Consensus 259 ~-~---~-~~dii---t~sK~l~-~G~~iG~~~~-~~~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~-----~~~~ 323 (420)
T 2pb2_A 259 Y-G---V-TPDIL---TSAKALG-GGFPVSAMLT-TQEIASAFHVGSHGSTYGGNPLACAVAGAAFDIINT-----PEVL 323 (420)
T ss_dssp H-T---C-CCSEE---EECGGGG-TTSCCEEEEE-CHHHHTTCC----CCEECCCHHHHHHHHHHHHHHSS-----HHHH
T ss_pred c-C---C-CCCeE---Eeccccc-CCCceEEEEE-hHHHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHh-----ccHH
Confidence 1 1 1 22222 7899999 8999999999 6777776654 344567888888887777643221 2345
Q ss_pred HHHHHHHHHHHHHHHhC--CCcc---cCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeE
Q 019899 233 RRIKKLYDSFVAGLKQL--GIRC---SESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWF 307 (334)
Q Consensus 233 ~~~~~~~~~~~~~l~~~--g~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~i 307 (334)
++++++++++.+.|++. +++. ..+ .|.+++++++.... .+..++...|++ +||.+.|+. ++++
T Consensus 324 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~g~~~~v~~~~~~~----~~~~~l~~~l~~-~Gi~v~~~~------~~~i 391 (420)
T 2pb2_A 324 QGIHTKRQQFVQHLQAIDEQFDIFSDIRG-MGLLIGAELKPKYK----GRARDFLYAGAE-AGVMVLNAG------ADVM 391 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCEEEEEE-ETTEEEEEECGGGT----TCHHHHHHHHHH-TTEECEESS------TTEE
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEEEe-cceEEEEEECCCch----HHHHHHHHHHHH-CCCEEEeCC------CCEE
Confidence 56666777777777654 2221 233 35667788864321 134578888655 899998863 5789
Q ss_pred EEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 308 RCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 308 Ri~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
|++++. .+++++++++++|++++++
T Consensus 392 Rl~~~~~~t~eei~~~~~~l~~~l~~ 417 (420)
T 2pb2_A 392 RFAPSLVVEEADIHEGMQRFAQAVGK 417 (420)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 999763 6999999999999999875
No 139
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.96 E-value=4.1e-29 Score=227.72 Aligned_cols=291 Identities=16% Similarity=0.139 Sum_probs=194.2
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc--------CCCCeEEecCCCCCChh-----------------hhhh
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLA--------DHGNALLVPSPYYPGFD-----------------RDIR 59 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~--------~~gd~vl~~~p~~~~~~-----------------~~~~ 59 (334)
+++.+++.+++++++|++|+|+++++..++.++. ++||+|+++.|+|..+. ...+
T Consensus 66 l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~ 145 (432)
T 3a9z_A 66 ARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVE 145 (432)
T ss_dssp HHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCcCeEEEeCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHH
Confidence 4444455556678899999999999999999886 58999999999998752 2223
Q ss_pred hccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcC---------
Q 019899 60 FRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKN--------- 130 (334)
Q Consensus 60 ~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~--------- 130 (334)
..|.+++.+++++ .++.+|+++|++++++ ++++|++++|+||||.++| +++|.++|++++
T Consensus 146 -~~g~~v~~v~~~~-~~~~~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~~~~ 214 (432)
T 3a9z_A 146 -DQVAEVTFVPVSK-VNGQVEVEDILAAVRP------TTCLVTIMLANNETGVIMP---ISEISRRIKALNQIRAASGLP 214 (432)
T ss_dssp -TTSCEEEEECCCT-TTSSCCHHHHHHTCCT------TEEEEECCSBCTTTCBBCC---HHHHHHHHHHHHHHHHHHTCC
T ss_pred -hcCcEEEEEecCc-ccCCcCHHHHHHhccC------CceEEEEECcccCcccccC---HHHHHHHHHhcCcccccccCC
Confidence 4689999999853 2457899999998875 7899999999999999999 778899999999
Q ss_pred -cEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHH-HHHHHH---------
Q 019899 131 -IHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESV-LAAAKK--------- 199 (334)
Q Consensus 131 -~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~-~~~~~~--------- 199 (334)
++||+|++|+.+. ...++... +.++++.|+||++| .|+||++++ ++. ...+..
T Consensus 215 ~~~livDea~~~~~----~~~~~~~~--------~~d~~~~s~~K~~g---~~~G~~~~~-~~~~~~~~~~~~~~~~~~~ 278 (432)
T 3a9z_A 215 RVLVHTDAAQALGK----RRVDVEDL--------GVDFLTIVGHKFYG---PRIGALYVR-GVGKLTPLYPMLFGGGQER 278 (432)
T ss_dssp CCEEEEECTTTTTT----SCCCHHHH--------CCSEEEEEGGGTTC---CSCEEEEET-TBTTTBCCCCSCCSSCGGG
T ss_pred ceEEEEEchhhhCC----cccChhhc--------CCCEEEEehhHhcC---CcceEEEEc-cccccCCcCceeecCCccc
Confidence 9999999997632 22233222 23356889999775 358999984 433 222221
Q ss_pred hhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCccc--CC-----CceeEEeeecCCcCC
Q 019899 200 LTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCS--ES-----SAGLYCWADMSGLIP 271 (334)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~--~~-----~~g~~~~~~~~~~~~ 271 (334)
....++.+...+.++..++.. +.+++.+..++++++++++.+.|+++ |+++. .+ ..+..+++.++....
T Consensus 279 ~~~~~~~~~~~~~a~~aal~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (432)
T 3a9z_A 279 NFRPGTENTPMIAGLGKAADL---VSENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQL 355 (432)
T ss_dssp GTSCSCCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTTC
T ss_pred cccCCCcCHHHHHHHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCCC
Confidence 112245677777776666643 23456778888999999999999884 65432 22 123345566654211
Q ss_pred CCChhhHHHHHHHHHHhcCeEEcCCCCcCCC------------------CCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 272 SYSEKGELELWDKLLNIAKINVTPGSACHCI------------------EPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 272 ~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~------------------~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
+..++... + .++.+.+|..|... ..+++|++++. .+++++++++++|++++++
T Consensus 356 -----~~~~~~~~-l--~~i~~~~G~~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~ 427 (432)
T 3a9z_A 356 -----RGYMVLAQ-C--QTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQ 427 (432)
T ss_dssp -----CHHHHHHH-C--SSEECBSSCGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred -----cHHHHHHH-h--cCeEEeccccccCCCCCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence 12344444 2 37877777655331 13789999995 4899999999999999876
Q ss_pred c
Q 019899 333 C 333 (334)
Q Consensus 333 ~ 333 (334)
.
T Consensus 428 ~ 428 (432)
T 3a9z_A 428 L 428 (432)
T ss_dssp H
T ss_pred h
Confidence 4
No 140
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.96 E-value=2e-28 Score=221.13 Aligned_cols=272 Identities=17% Similarity=0.225 Sum_probs=194.3
Q ss_pred CCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhh---ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 17 PSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRF---RTGVELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~---~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
.+++++++|+++|+..++.+++++||+|+++.|+|+++...+.. ..|.+++.++.. |++++++++++
T Consensus 96 ~~~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~ai~~--- 165 (414)
T 3ndn_A 96 APAAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGD-------DLSQWERALSV--- 165 (414)
T ss_dssp CSEEEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-------CHHHHHHHTSS---
T ss_pred CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCC-------CHHHHHHhcCC---
Confidence 36889999999999999999999999999999999998877651 389999999862 78999999875
Q ss_pred cCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEeccc
Q 019899 94 RGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLS 173 (334)
Q Consensus 94 ~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s 173 (334)
++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+...+. .+. . .+.++++.|+|
T Consensus 166 ---~t~~v~le~p~NptG~~~~---l~~i~~la~~~g~~livDe~~~~~~~~----~~~----~-----~g~div~~S~s 226 (414)
T 3ndn_A 166 ---PTQAVFFETPSNPMQSLVD---IAAVTELAHAAGAKVVLDNVFATPLLQ----QGF----P-----LGVDVVVYSGT 226 (414)
T ss_dssp ---CCSEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHC----CCG----G-----GTCSEEEEETT
T ss_pred ---CCeEEEEECCCCCCCcccc---HHHHHHHHHHcCCEEEEECCCcccccC----Cch----h-----cCCCeEeccCC
Confidence 7899999999999999998 999999999999999999998742211 111 1 45678899999
Q ss_pred ccCCCCC-ceEEEEeecCHHHHH-HHHHhhccc--CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 019899 174 KDLSLPG-FRTGVIYSYNESVLA-AAKKLTRFC--SISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL 249 (334)
Q Consensus 174 K~~~~~g-~r~g~i~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 249 (334)
|+++.+| +++|++++ +++... .++.....+ ..++.....+...++. +..+.++..++++.+.+.|++.
T Consensus 227 K~l~~~G~~~~G~vv~-~~~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l~~-------l~~r~~~~~~~a~~l~~~L~~~ 298 (414)
T 3ndn_A 227 KHIDGQGRVLGGAILG-DREYIDGPVQKLMRHTGPAMSAFNAWVLLKGLET-------LAIRVQHSNASAQRIAEFLNGH 298 (414)
T ss_dssp TTTTCSSCCCCEEEEE-CHHHHTTHHHHHHHHHCCCCCHHHHHHHHHHGGG-------HHHHHHHHHHHHHHHHHHHHTC
T ss_pred ccccCCCCceEEEEEE-CHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhcC
Confidence 9998778 89999998 665554 565433332 2344433333333322 2334455667778888888775
Q ss_pred -CCccc-CC----------------CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCC----------
Q 019899 250 -GIRCS-ES----------------SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHC---------- 301 (334)
Q Consensus 250 -g~~~~-~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---------- 301 (334)
++..+ .| ..|.+++++++.... ...+....+.+. ++..++.+.+|..+..
T Consensus 299 p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~-~~~~~~~~~~~~-l~~~~~~~s~G~~~sl~~~p~~~~~~ 376 (414)
T 3ndn_A 299 PSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPED-VAKQRAFEVLDK-MRLIDISNNLGDAKSLVTHPATTTHR 376 (414)
T ss_dssp TTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGG-GHHHHHHHHHHH-CSSSEECSCCSCSSCEEECGGGTTTC
T ss_pred CCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCcc-ccHHHHHHHHHh-CccceEcCCCCCCCceeeCccccccc
Confidence 22211 11 146678888864200 001234456666 5557777777765422
Q ss_pred -----------CCCCeEEEEecCCCcccHHHHHHHHHHHH
Q 019899 302 -----------IEPGWFRCCFTSLTHEDIPLVIERIQKVA 330 (334)
Q Consensus 302 -----------~~~~~iRi~~~~~~~~~l~~~l~~l~~~~ 330 (334)
..++.+|+|++ .|+.+++++.|.+++
T Consensus 377 ~~~~~~~~~~g~~~~~iRlsvG---~e~~~dli~dl~~al 413 (414)
T 3ndn_A 377 AMGPEGRAAIGLGDGVVRISVG---LEDTDDLIADIDRAL 413 (414)
T ss_dssp TTHHHHHHHTTCCTTEEEEECC---SSCHHHHHHHHHHHH
T ss_pred cCCHHHHHhcCCCCCeEEEEeC---cCCHHHHHHHHHHhh
Confidence 13578999999 678888888888876
No 141
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.96 E-value=2.8e-30 Score=229.98 Aligned_cols=282 Identities=10% Similarity=0.061 Sum_probs=200.3
Q ss_pred hhhhhcCCCCCCCC-c-EEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCCh--hhhhhhccCcEEEEEeCCCC--CCcc
Q 019899 5 MSQVLGQAVSFDPS-Q-IVLTAGATPAVEILCFCLADHGNALLVPSPYYPGF--DRDIRFRTGVELIPVHCRST--DNFA 78 (334)
Q Consensus 5 ~~~~~~~~~~~~~~-~-i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~--~~~~~~~~g~~v~~v~~~~~--~~~~ 78 (334)
+++.+++.++++++ + +++|+|++++++.++.+++++||+|+++.+.+++. ...++ ..| +++.++++.+ .+..
T Consensus 54 ~~~~la~~~g~~~~~~~i~~t~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~-~~g-~~~~v~~~~~~~~~~~ 131 (362)
T 2c0r_A 54 AQARLLALLGNPTGYKVLFIQGGASTQFAMIPMNFLKEGQTANYVMTGSWASKALKEAK-LIG-DTHVAASSEASNYMTL 131 (362)
T ss_dssp HHHHHHHHTTCCSSEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHH-HHS-CEEEEEECGGGTTCSC
T ss_pred HHHHHHHHhCCCCCcEEEEECCCchHHHHHHHHhcCCCCCeEEEEecCcHhHHHHHHHH-HhC-CeEEEecccccccccC
Confidence 34444444556664 6 46779999999999999999999999887665443 34455 678 9999987522 2333
Q ss_pred ccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhc
Q 019899 79 FSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEA 158 (334)
Q Consensus 79 ~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~ 158 (334)
+|.++++ +++ ++++|++++|+||||.+++ ++++| +|+++++|++|+.+.. ..++ ..
T Consensus 132 ~~~~~~~--i~~------~t~~v~~~~~~n~tG~~~~--~l~~i------~~~~vivD~a~~~~~~----~~~~---~~- 187 (362)
T 2c0r_A 132 PKLQEIQ--LQD------NAAYLHLTSNETIEGAQFK--AFPDT------GSVPLIGDMSSDILSR----PFDL---NQ- 187 (362)
T ss_dssp CCGGGCC--CCT------TEEEEEEESEETTTTEECS--SCCCC------TTSCEEEECTTTTTSS----CCCG---GG-
T ss_pred CCHHHcc--cCC------CcCEEEEeCCcCccceecc--ccccc------CCCEEEEEChhhccCC----ccch---hH-
Confidence 4665553 433 7999999999999999743 25554 8999999999986432 1122 11
Q ss_pred cccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh--------------hcccCCChHHHHHHHHhhCChHHH
Q 019899 159 EEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL--------------TRFCSISAPTQRLLISMLSDTKFI 224 (334)
Q Consensus 159 ~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~l~~~~~~ 224 (334)
. ++++.|+||++|++| +||+++ ++++++.+... ...++.+...+.++..+++...
T Consensus 188 ----~--d~~~~s~~K~~g~~G--~G~l~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~-- 256 (362)
T 2c0r_A 188 ----F--GLVYAGAQKNLGPSG--VTVVIV-REDLVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIE-- 256 (362)
T ss_dssp ----C--SEEEEETTTTTCCSS--CEEEEE-EGGGSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHH--
T ss_pred ----C--cEEEEeccccccCcC--cEEEEE-cHHHHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHH--
Confidence 2 477789999999777 899998 56665444321 2235677788888877775321
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHHHhCC-C-cccCC---CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCC
Q 019899 225 QE-YLETNKRRIKKLYDSFVAGLKQLG-I-RCSES---SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSA 298 (334)
Q Consensus 225 ~~-~~~~~~~~~~~~~~~~~~~l~~~g-~-~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~ 298 (334)
+. .+++++++++++++++.+.|++++ + ++..+ ..+.++++.++.. .+..++... |+++||.+.||..
T Consensus 257 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~-L~~~gi~~~~g~~ 329 (362)
T 2c0r_A 257 ERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLASE------ELEKEFVKA-SEQEGFVGLKGHR 329 (362)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSCH------HHHHHHHHH-HHHTTEESCBCCT
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCCcEEEEEcCCc------chHHHHHHH-HHHCCCeeccCCC
Confidence 21 467788899999999999999987 6 65322 2344567777632 244677787 5668999888775
Q ss_pred cCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHHcC
Q 019899 299 CHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAETCK 334 (334)
Q Consensus 299 ~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~~ 334 (334)
+ .+++|+|++. .++++++++++.|++++++++
T Consensus 330 ~----~~~iRis~~~~~~~e~i~~l~~~l~~~~~~~~ 362 (362)
T 2c0r_A 330 S----VGGLRASIYNAVPYESCEALVQFMEHFKRSRG 362 (362)
T ss_dssp T----TCSEEEECCTTSCHHHHHHHHHHHHHHHHHHC
T ss_pred C----CCEEEEECCCCCCHHHHHHHHHHHHHHHHhcC
Confidence 5 3579999985 589999999999999988763
No 142
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.96 E-value=9.4e-28 Score=215.72 Aligned_cols=278 Identities=15% Similarity=0.139 Sum_probs=202.1
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhh----hhccCcEEEEEeCCCCCCcccc
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDI----RFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
+++.+++..+. +++++++|+++|+..++.+++++||+|+++.|+|+++...+ . ..|.+++.++.. |
T Consensus 71 l~~~la~~~g~--~~~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~-~~g~~~~~v~~~-------d 140 (392)
T 3qhx_A 71 LEAALAAVEDA--AFGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFT-GWNVEYTPVALA-------D 140 (392)
T ss_dssp HHHHHHHHTTC--SEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGG-GGTCEEEEECTT-------C
T ss_pred HHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHH-hcCcEEEEeCCC-------C
Confidence 44445444443 47999999999999999999999999999999999877665 4 679999999862 7
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+.+... .+. .
T Consensus 141 ~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~~~~----~~~----~--- 200 (392)
T 3qhx_A 141 LDAVRAAIRP------TTRLIWVETPTNPLLSIAD---IAGIAQLGADSSAKVLVDNTFASPALQ----QPL----S--- 200 (392)
T ss_dssp HHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTC----CGG----G---
T ss_pred HHHHHHhhCC------CCeEEEEECCCCCCcEEec---HHHHHHHHHHcCCEEEEECCCcccccC----ChH----H---
Confidence 8999999876 8999999999999999999 999999999999999999999753221 111 1
Q ss_pred cCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHHhhcc--cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKKLTRF--CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
.+.++++.|+||.++.+| ++.||++++++++.+.+...... ...++..+.++...++.. ..+.++..+
T Consensus 201 --~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~l-------~~~~~~~~~ 271 (392)
T 3qhx_A 201 --LGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQNGAGAVPGPFDAYLTMRGLKTL-------VLRMQRHSE 271 (392)
T ss_dssp --GTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTH-------HHHHHHHHH
T ss_pred --hCCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhHH-------HHHHHHHHH
Confidence 456788999999998666 78999999668888888765443 456667766666666552 223445566
Q ss_pred HHHHHHHHHHhC-CCccc-C----------------CCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCc
Q 019899 238 LYDSFVAGLKQL-GIRCS-E----------------SSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSAC 299 (334)
Q Consensus 238 ~~~~~~~~l~~~-g~~~~-~----------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~ 299 (334)
+++.+.+.|+++ .+..+ . ...|.++++.++.. ......+... ++..++.+..|+.+
T Consensus 272 ~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~-----~~~~~~~~~~-l~~~~~~~s~G~~~ 345 (392)
T 3qhx_A 272 NAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAG-----RTAAEQLCAK-TNIFILAESLGSVE 345 (392)
T ss_dssp HHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTC-----HHHHHHHHHH-CSSSEECSCCCCSS
T ss_pred HHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCc-----HHHHHHHHHh-CCCceECCCCCCCC
Confidence 677777777765 22111 1 11255677888652 1233455555 56577877777653
Q ss_pred CC------------------CCCCeEEEEecCCCcccHHHHHHHHHHHH
Q 019899 300 HC------------------IEPGWFRCCFTSLTHEDIPLVIERIQKVA 330 (334)
Q Consensus 300 ~~------------------~~~~~iRi~~~~~~~~~l~~~l~~l~~~~ 330 (334)
+. ..++.+|+|++ .++.++.++.|.+++
T Consensus 346 sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg---~e~~~~~i~~l~~al 391 (392)
T 3qhx_A 346 SLIEHPSAMTHASTAGSQLEVPDDLVRLSVG---IEDVADLLDDLKQAL 391 (392)
T ss_dssp CEEECGGGTSCGGGBTTBCCCCTTEEEEECC---SSCHHHHHHHHHHHH
T ss_pred ceeeCcccccccccCHHHcCCCCCeEEEEec---cCCHHHHHHHHHHHh
Confidence 21 12567999998 567777777777765
No 143
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.96 E-value=4.6e-29 Score=229.45 Aligned_cols=288 Identities=11% Similarity=0.065 Sum_probs=206.9
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCC---eEEecCCCCCChhh----hhhhccCcEEE-----EEeCC
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGN---ALLVPSPYYPGFDR----DIRFRTGVELI-----PVHCR 72 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd---~vl~~~p~~~~~~~----~~~~~~g~~v~-----~v~~~ 72 (334)
+++.+++.+++++++|++|+|++++++.++.+++++|+ +|+++.|+|++... .++ ..|.++. .++.
T Consensus 116 l~~~la~~~g~~~~~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~-~~G~~~~~~~v~~~~~- 193 (465)
T 3e9k_A 116 IVGLMKDIVGANEKEIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQ-LHGLNIEESMRMIKPR- 193 (465)
T ss_dssp HHGGGHHHHTCCGGGEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHH-HTTCCHHHHEEEECCC-
T ss_pred HHHHHHHHcCCCcCCEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHH-HcCCcceeeeEEEecC-
Confidence 44555555667889999999999999999999987655 49999999998544 444 5787752 2233
Q ss_pred CCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchh
Q 019899 73 STDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSM 152 (334)
Q Consensus 73 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~ 152 (334)
++++.+|++++++++++. +.++++|++++|+||||.++| +++|.++|+++|++|++|++|+.. .....+
T Consensus 194 -~~~~~~d~~~l~~~i~~~---~~~~~lv~~~~~~n~tG~~~~---l~~i~~la~~~g~~vi~D~a~~~g----~~~~~~ 262 (465)
T 3e9k_A 194 -EGEETLRIEDILEVIEKE---GDSIAVILFSGVHFYTGQHFN---IPAITKAGQAKGCYVGFDLAHAVG----NVELYL 262 (465)
T ss_dssp -TTCSSCCHHHHHHHHHHH---GGGEEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTT----TSCCCH
T ss_pred -CCCCccCHHHHHHHHHhc---CCCeEEEEEeCcccCcceeec---HHHHHHHHHHcCCEEEEEhhhhcC----CcCCch
Confidence 456788999999999743 127899999999999999999 899999999999999999998752 222233
Q ss_pred hhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhc---------------------------ccC
Q 019899 153 AEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTR---------------------------FCS 205 (334)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~---------------------------~~~ 205 (334)
.. .+.++++.|++|+++..+.++|++++ ++++.+.+..... .++
T Consensus 263 ~~--------~~~D~~~~s~~K~l~~gp~~~g~l~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt 333 (465)
T 3e9k_A 263 HD--------WGVDFACWCSYKYLNAGAGGIAGAFI-HEKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISN 333 (465)
T ss_dssp HH--------HTCCEEEECSSSTTCCCTTCCCEEEE-CGGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSC
T ss_pred hh--------cCCCEEEECcccccccCCCceEEEEE-cHHHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCC
Confidence 22 35568889999999312236789888 6666544321100 013
Q ss_pred CChHHHHHHHHhhCChHHHHH-HHHHHHHHHHHHHHHHHHHHHh-----------CCCcccCCC----ceeEEeeecCCc
Q 019899 206 ISAPTQRLLISMLSDTKFIQE-YLETNKRRIKKLYDSFVAGLKQ-----------LGIRCSESS----AGLYCWADMSGL 269 (334)
Q Consensus 206 ~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~-----------~g~~~~~~~----~g~~~~~~~~~~ 269 (334)
.+.....++...+.. +.+ .+++++++..++++++.+.|++ .|+++..|. .|.++++.++.
T Consensus 334 ~~~~~~~a~~aal~~---~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~- 409 (465)
T 3e9k_A 334 PPILLVCSLHASLEI---FKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFSV- 409 (465)
T ss_dssp CCHHHHHHHHHHHHH---HHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEECC-
T ss_pred ccHHHHHHHHHHHHH---HHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEecC-
Confidence 444555555555533 222 2677888899999999999987 577777665 25567777762
Q ss_pred CCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEe-cC-CCcccHHHHHHHHHHHHHH
Q 019899 270 IPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCF-TS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 270 ~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~-~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
. ..++.+.|. ++||.+..+ .++++|+++ +. .+++|++++++.|++++++
T Consensus 410 -~------~~~l~~~L~-~~Gi~v~~~------~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~ 460 (465)
T 3e9k_A 410 -P------NKDVFQELE-KRGVVCDKR------NPNGIRVAPVPLYNSFHDVYKFTNLLTSILDS 460 (465)
T ss_dssp -T------TCCHHHHHH-TTTEECEEE------TTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC
T ss_pred -C------HHHHHHHHH-HCCEEEecC------CCCEEEEeCcccCCCHHHHHHHHHHHHHHHHh
Confidence 1 236777754 579988621 257999998 43 6999999999999999865
No 144
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.96 E-value=2.3e-28 Score=222.17 Aligned_cols=280 Identities=14% Similarity=0.059 Sum_probs=188.4
Q ss_pred EEecCcHHHHHHHHHHhcCCCCeEEecCCCCCC---hhhhhhhccCc--EEEEEeCCCCCCccccHHHHHHHHHHHHHcC
Q 019899 21 VLTAGATPAVEILCFCLADHGNALLVPSPYYPG---FDRDIRFRTGV--ELIPVHCRSTDNFAFSITALDQAFNQARKRG 95 (334)
Q Consensus 21 ~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~---~~~~~~~~~g~--~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~ 95 (334)
++++|+++++..++.+++++||+|+++.|+|++ +..... ..|. .++.++.. .+++.+|++++++++++.
T Consensus 98 v~~~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~-~~~~~~d~~~l~~~i~~~---- 171 (425)
T 3ecd_A 98 VQPHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPA-LSGKWFNALQYGVS-RDTMLIDYDQVEALAQQH---- 171 (425)
T ss_dssp CCCSSHHHHHHHHHHHHCCTTCEEEEECC-------------------CEEEEECCC-TTTSSCCHHHHHHHHHHH----
T ss_pred eecCchHHHHHHHHHHccCCCCEEEEcccccccceecchhhh-hcccceeeeecCCC-cccCccCHHHHHHHHhhc----
Confidence 458889999999999999999999999999987 222222 3344 45556553 245789999999999853
Q ss_pred CceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEecccccc-ccCCCCcchhhhhhhccccCCCcEEEEecccc
Q 019899 96 VKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGS-IFGNEEFVSMAEILEAEEVDKDRVHIIYGLSK 174 (334)
Q Consensus 96 ~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK 174 (334)
++++|++++|+|| ...+ +++|.++|++||+++|+||+|... .+.+.....+ ...++++.|+||
T Consensus 172 -~~~~v~~~~~~~~--~~~~---l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~----------~~~di~~~s~sK 235 (425)
T 3ecd_A 172 -KPSLIIAGFSAYP--RKLD---FARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPV----------EHAHVVTSTTHK 235 (425)
T ss_dssp -CCSEEEEECSCCC--SCCC---HHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGG----------GTCSEEEEESSG
T ss_pred -CCcEEEEccccCC--CcCC---HHHHHHHHHHcCCEEEEECcChHhhhhcccccCch----------hcCcEEEecCCc
Confidence 7899999989886 4555 899999999999999999996432 2332211111 113478899999
Q ss_pred cCCCCCceEEEEeecCHHHHHHHHHhhccc---CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 019899 175 DLSLPGFRTGVIYSYNESVLAAAKKLTRFC---SISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGI 251 (334)
Q Consensus 175 ~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 251 (334)
++ +|.|.||++++++.+.+.+......+ +.+.....++..++.. ...+.+.++.+++.++++++.+.|++.|+
T Consensus 236 ~l--~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~--~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 311 (425)
T 3ecd_A 236 TL--RGPRGGFVLTNDEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGE--ALTDDFKTYIDRVLANAQALGDVLKAGGV 311 (425)
T ss_dssp GG--CCCSCEEEEESCHHHHHHHHHHHC-----CCCHHHHHHHHHHHHH--HTSHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cc--CCCCcEEEEeCCHHHHHHHHhhhCccccCCccHHHHHHHHHHHHH--HHHHhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 98 56688999996678888776644332 2333333333333221 11234567788888999999999999888
Q ss_pred cccCC-CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEc----CCCCcCCCCCCeEEEEecC-----CCcccHHH
Q 019899 252 RCSES-SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVT----PGSACHCIEPGWFRCCFTS-----LTHEDIPL 321 (334)
Q Consensus 252 ~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~----~g~~~~~~~~~~iRi~~~~-----~~~~~l~~ 321 (334)
++..+ ..++++|+.++.... +...+... ++++||.+. ||..+....++++|++++. .+++++++
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~ 385 (425)
T 3ecd_A 312 DLVTGGTDNHLLLVDLRPKGL-----KGAQVEQA-LERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFRE 385 (425)
T ss_dssp EEGGGSCSSSEEEEECGGGTC-----CHHHHHHH-HHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHH
T ss_pred eeccCCCCceEEEEEeCCCCC-----CHHHHHHH-HHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHH
Confidence 87653 467778888764321 23344455 677899999 5443333335689999543 34899999
Q ss_pred HHHHHHHHHHH
Q 019899 322 VIERIQKVAET 332 (334)
Q Consensus 322 ~l~~l~~~~~~ 332 (334)
+++.|++++++
T Consensus 386 ~~~~l~~~l~~ 396 (425)
T 3ecd_A 386 VGRLILEVFEA 396 (425)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 99999998865
No 145
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.96 E-value=1.1e-28 Score=222.78 Aligned_cols=290 Identities=12% Similarity=0.091 Sum_probs=203.0
Q ss_pred hcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhh---hhhccCc--EEEEEeCCCCCCccccHHH
Q 019899 9 LGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRD---IRFRTGV--ELIPVHCRSTDNFAFSITA 83 (334)
Q Consensus 9 ~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~---~~~~~g~--~v~~v~~~~~~~~~~~~~~ 83 (334)
+++.++++++.+++++| ++++..++.+++++||+|+++.|+|+++... +. ..|. +++.+++++ +++.+|+++
T Consensus 78 la~~~g~~~~~i~~~sG-t~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~-~~~~~d~~~ 154 (405)
T 2vi8_A 78 AKQLFGAEHANVQPHSG-AQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVN-FSGVQYNFVAYGVDP-ETHVIDYDD 154 (405)
T ss_dssp HHHHHTCSEEECCCSSH-HHHHHHHHHHHCCTTCEEEEECGGGTCCTTTTCTTS-HHHHHSEEEEECBCT-TTCSBCHHH
T ss_pred HHHHhCCCceEEEecCc-HHHHHHHHHHhcCCCCEEEEecccccchhcccchhh-hccceeEEEeccccc-ccCCcCHHH
Confidence 33334455444545555 9999999999999999999999999988642 12 3344 777777632 457899999
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCC
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDK 163 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (334)
+++++++. +++++++ +|+|+ |...+ +++|.++|+++|+++|+|++|+.+...... .. ..+ .
T Consensus 155 l~~~i~~~-----~~~~v~~-~~~~~-~~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~-~~-~~~-------~ 215 (405)
T 2vi8_A 155 VREKARLH-----RPKLIVA-AAAAY-PRIID---FAKFREIADEVGAYLMVDMAHIAGLVAAGL-HP-NPV-------P 215 (405)
T ss_dssp HHHHHHHH-----CCSEEEE-CCSSC-CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTS-SC-CST-------T
T ss_pred HHHHHHhc-----CCeEEEE-eCCCC-CccCC---HHHHHHHHHHcCCEEEEEccccccccccCc-CC-Ccc-------c
Confidence 99999864 6787766 55443 45556 899999999999999999999853221111 11 111 1
Q ss_pred CcEEEEecccccCC-CCCceEEEEeecCHHHHHHHHHhhccc--CC-ChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHH
Q 019899 164 DRVHIIYGLSKDLS-LPGFRTGVIYSYNESVLAAAKKLTRFC--SI-SAPTQRLLISMLSDTKFIQEYLETNKRRIKKLY 239 (334)
Q Consensus 164 ~~~~~~~s~sK~~~-~~g~r~g~i~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (334)
..++++.|+||+++ +.| ||+++ ++++.+.+......+ +. +.....++..++.... ..++.+..+++.+++
T Consensus 216 ~~di~~~s~sK~~~g~~g---G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~--~~~~~~~~~~~~~~~ 289 (405)
T 2vi8_A 216 YAHFVTTTTHKTLRGPRG---GMILC-QEQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEAL--QDDFKAYAKRVVDNA 289 (405)
T ss_dssp TCSEEEEESSSTTCCCSC---EEEEE-CHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHH--SHHHHHHHHHHHHHH
T ss_pred cCCEEEEeccccCCCCCC---eEEEE-cHHHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHH
Confidence 23478899999996 555 99998 788888887654333 22 3334444444443211 245677888899999
Q ss_pred HHHHHHHHhCCCcccCC-CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCC----cCCCCCCeEEEEecC-
Q 019899 240 DSFVAGLKQLGIRCSES-SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSA----CHCIEPGWFRCCFTS- 313 (334)
Q Consensus 240 ~~~~~~l~~~g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~----~~~~~~~~iRi~~~~- 313 (334)
+++.+.|++.|+++..+ ..++++|++++... .+..++... +.++||.+.||.. ++...++++|++++.
T Consensus 290 ~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~ 363 (405)
T 2vi8_A 290 KRLASALQNEGFTLVSGGTDNHLLLVDLRPQQ-----LTGKTAEKV-LDEVGITVNKNTIPYDPESPFVTSGIRIGTAAV 363 (405)
T ss_dssp HHHHHHHHHTTCEEGGGSCSSSEEEEECGGGT-----CCHHHHHHH-HHHHTEECEEECCTTCSSCTTTCSEEEEECHHH
T ss_pred HHHHHHHHhCCCeEecCCCCceEEEEEccCCC-----CCHHHHHHH-HHHcCceeccCcCccccCCCCCCCceEEeeeee
Confidence 99999999888887754 45788889887421 123567666 5668999998763 232235789999983
Q ss_pred ----CCcccHHHHHHHHHHHHHH
Q 019899 314 ----LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 314 ----~~~~~l~~~l~~l~~~~~~ 332 (334)
.+++++++++++|++++++
T Consensus 364 ~~~~~~~~~i~~~~~~l~~~~~~ 386 (405)
T 2vi8_A 364 TTRGFGLEEMDEIAAIIGLVLKN 386 (405)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHTC
T ss_pred eecCCCHHHHHHHHHHHHHHHhc
Confidence 5799999999999998865
No 146
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.96 E-value=1.6e-28 Score=220.71 Aligned_cols=288 Identities=13% Similarity=0.182 Sum_probs=202.9
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHh-cCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCL-ADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITA 83 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l-~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~ 83 (334)
+++.+++.++.+ +.|++++| ++++..++.++ .++||+|+++.|+|+++...++ ..|.+++.+++++ +++.+|+++
T Consensus 43 l~~~la~~~~~~-~~i~~~sG-t~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~~~~-~~g~~~~~v~~~~-~~~~~d~~~ 118 (388)
T 1b9h_A 43 FEREFAAHHGAA-HALAVTNG-THALELALQVMGVGPGTEVIVPAFTFISSSQAAQ-RLGAVTVPVDVDA-ATYNLDPEA 118 (388)
T ss_dssp HHHHHHHHTTCS-EEEEESCH-HHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHH-HTTCEEEEECBCT-TTCCBCHHH
T ss_pred HHHHHHHHhCCC-eEEEeCCH-HHHHHHHHHHcCCCCcCEEEECCCccHHHHHHHH-HcCCEEEEEecCC-CcCCCCHHH
Confidence 344444445443 45666655 89999999999 8999999999999999999988 8999999999853 347899999
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccc-cCCCCcchhhhhhhccccC
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSI-FGNEEFVSMAEILEAEEVD 162 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~-~~~~~~~~~~~~~~~~~~~ 162 (334)
+++++++ ++++|+ |+||||.+.+ +++|.++|+++|++||+|++|+.+. +.+. ++..
T Consensus 119 l~~~i~~------~~~~v~---~~n~tG~~~~---l~~i~~la~~~~~~li~D~a~~~g~~~~~~---~~~~-------- 175 (388)
T 1b9h_A 119 VAAAVTP------RTKVIM---PVHMAGLMAD---MDALAKISADTGVPLLQDAAHAHGARWQGK---RVGE-------- 175 (388)
T ss_dssp HHHHCCT------TEEEEC---CBCGGGCCCC---HHHHHHHHHHHTCCBCEECTTCTTCEETTE---EGGG--------
T ss_pred HHHhcCc------CceEEE---EeCCccCcCC---HHHHHHHHHHcCCEEEEecchhcCCccCCe---eccc--------
Confidence 9999865 677665 8999999988 8999999999999999999998632 3221 1111
Q ss_pred CCcEEEEecccccCCCCCceEEEEeecCHHH--HHHHHHhhcc---------------c--CCChHHHHHHHHhhCChHH
Q 019899 163 KDRVHIIYGLSKDLSLPGFRTGVIYSYNESV--LAAAKKLTRF---------------C--SISAPTQRLLISMLSDTKF 223 (334)
Q Consensus 163 ~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~--~~~~~~~~~~---------------~--~~~~~~~~~~~~~l~~~~~ 223 (334)
.+ ++.+.||||..+++|.++||++++++.+ .+.+...... . ..+.....++...+
T Consensus 176 ~~-~i~~~S~s~~K~l~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~~----- 249 (388)
T 1b9h_A 176 LD-SIATFSFQNGKLMTAGEGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQL----- 249 (388)
T ss_dssp SS-SCEEEECCTTSSSCSSSCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHHHHHHH-----
T ss_pred cc-ceEEEEccCCCcccCCCeEEEEECCHHHHHHHHHHHHHhCCCCccCccceeecccccCCcCHHHHHHHHHHH-----
Confidence 22 4677888855555666899999855446 5665433211 0 12222222222221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccC------CCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCC
Q 019899 224 IQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSE------SSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPG 296 (334)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g 296 (334)
+++.+..++++++++++.+.|+++ ++++.. +.+++++|++++... ..+..++...|. ++||.+.++
T Consensus 250 --~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~L~-~~gI~v~~~ 322 (388)
T 1b9h_A 250 --ARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLT----EERRNALVDRLV-EAGLPAFAA 322 (388)
T ss_dssp --TTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCC----HHHHHHHHHHHH-HTTCCEEEC
T ss_pred --HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCcC----cccHHHHHHHHH-HCCCCcccc
Confidence 223456667778889999999887 777654 345788899987521 123467888855 589999876
Q ss_pred CCcCC----------CC-----------------CCeEEEEecC-C-CcccHHHHHHHHHHHHHH
Q 019899 297 SACHC----------IE-----------------PGWFRCCFTS-L-THEDIPLVIERIQKVAET 332 (334)
Q Consensus 297 ~~~~~----------~~-----------------~~~iRi~~~~-~-~~~~l~~~l~~l~~~~~~ 332 (334)
..... .. .+.+|++++. + +++|++++++.|++++++
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~l~~~~~~ 387 (388)
T 1b9h_A 323 FRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADAVAR 387 (388)
T ss_dssp CCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHH
T ss_pred cCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 43110 00 1359999985 7 899999999999998875
No 147
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.96 E-value=2.5e-28 Score=220.27 Aligned_cols=287 Identities=17% Similarity=0.220 Sum_probs=205.1
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHh-cCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCL-ADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITA 83 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l-~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~ 83 (334)
+++.+++.++.+ ++++++++++++..++.++ +++||+|+++.|+|+++...++ ..|.+++.+++++ +++.+|+++
T Consensus 68 l~~~la~~~~~~--~~v~~~~Gt~a~~~~l~~~~~~~gd~vl~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~d~~~ 143 (399)
T 2oga_A 68 FEAEFAAYCETD--HAVGVNSGMDALQLALRGLGIGPGDEVIVPSHTYIASWLAVS-ATGATPVPVEPHE-DHPTLDPLL 143 (399)
T ss_dssp HHHHHHHHTTSS--EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHH-HTTCEEEEECBCS-SSSSBCHHH
T ss_pred HHHHHHHHHCCC--eEEEecCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHHHHH-HCCCEEEEEecCC-CCCCcCHHH
Confidence 344444444433 6788888899999999999 8999999999999999999888 8899999999853 356899999
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccc-cCCCCcchhhhhhhccccC
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSI-FGNEEFVSMAEILEAEEVD 162 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~-~~~~~~~~~~~~~~~~~~~ 162 (334)
+++++++ ++++|+ |+||||.+.+ +++|.++|+++|+++|+|++|+.+. +++. . +.
T Consensus 144 l~~~i~~------~~~~v~---~~n~tG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~---~---~~------ 199 (399)
T 2oga_A 144 VEKAITP------RTRALL---PVHLYGHPAD---MDALRELADRHGLHIVEDAAQAHGARYRGR---R---IG------ 199 (399)
T ss_dssp HHHHCCT------TEEEEC---CBCGGGCCCC---HHHHHHHHHHHTCEECEECTTCTTCEETTE---E---TT------
T ss_pred HHHhcCC------CCeEEE---EeCCcCCccC---HHHHHHHHHHcCCEEEEECcccccCccCCe---e---cc------
Confidence 9999875 678666 5689999998 8999999999999999999998653 2211 1 11
Q ss_pred CCcEEEEecc--cccCCCCCceEEEEeecCHHHHHHHHHhhcc--------------cCCChHHHHHHHHhhCChHHHHH
Q 019899 163 KDRVHIIYGL--SKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--------------CSISAPTQRLLISMLSDTKFIQE 226 (334)
Q Consensus 163 ~~~~~~~~s~--sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~l~~~~~~~~ 226 (334)
.-.++++.|+ ||.++.+| +.|+++++++++.+.++..... +..++....++...++..
T Consensus 200 ~~~di~~~S~~~sK~~~~~G-~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~----- 273 (399)
T 2oga_A 200 AGSSVAAFSFYPGKNLGCFG-DGGAVVTGDPELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAHL----- 273 (399)
T ss_dssp CTTCEEEEECCTTSSSCCSS-CCEEEEESCHHHHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHTH-----
T ss_pred cccCEEEEeCCCCccCCcCC-ceEEEEeCCHHHHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHHH-----
Confidence 1124777888 79999668 8999998668888888764332 234555555554444332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCccc-CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcC----
Q 019899 227 YLETNKRRIKKLYDSFVAGLKQL-GIRCS-ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACH---- 300 (334)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~l~~~-g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~---- 300 (334)
.+..++..++.+++.+.|+++ ++++. .+..+.++|+.++-... +..++...| .++||.+.++....
T Consensus 274 --~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~L-~~~gI~v~~~~~~~~~~~ 345 (399)
T 2oga_A 274 --DSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDPVWHLFTVRTE-----RRDELRSHL-DARGIDTLTHYPVPVHLS 345 (399)
T ss_dssp --HHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTEECCCSSEEEECS-----SHHHHHHHH-HHTTBCCBCSCSSCGGGS
T ss_pred --HHHHHHHHHHHHHHHHHhccCCCccccCCCCCCcceeEEEEEECC-----CHHHHHHHH-HHCCCceecCCCCccccc
Confidence 233445556678888888876 67664 34455555533332111 345777775 55899998753210
Q ss_pred -------CC----------CCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 301 -------CI----------EPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 301 -------~~----------~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
.. ..+.+|++++. .+++|++++++.|++++++.
T Consensus 346 ~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~l 396 (399)
T 2oga_A 346 PAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVREWAERV 396 (399)
T ss_dssp HHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHHHSC
T ss_pred hhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 00 02579999875 69999999999999998764
No 148
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.96 E-value=1.3e-28 Score=221.70 Aligned_cols=278 Identities=14% Similarity=0.086 Sum_probs=191.9
Q ss_pred CCcEEEecCcHHHHHHHHHHhc-------CCCCeEEecCCCCCChhhhhhhc------------cCcEEEEEeCCCCCCc
Q 019899 17 PSQIVLTAGATPAVEILCFCLA-------DHGNALLVPSPYYPGFDRDIRFR------------TGVELIPVHCRSTDNF 77 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~-------~~gd~vl~~~p~~~~~~~~~~~~------------~g~~v~~v~~~~~~~~ 77 (334)
.+++++++|+++++..++..+. .++|+|++.+|+|+++....... .+.++..++.
T Consensus 93 ~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 166 (395)
T 3nx3_A 93 LERVFFTNSGTESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKY------ 166 (395)
T ss_dssp CSEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECT------
T ss_pred CCeEEEeCCHHHHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCC------
Confidence 5899999999999999988774 45799999999998765333201 1235555553
Q ss_pred cccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccC-CCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhh
Q 019899 78 AFSITALDQAFNQARKRGVKVRGILICNPANPVGNI-IPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEIL 156 (334)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~ 156 (334)
.|+++|++++++ +++++++..++|++|.+ .+.+++++|.++|++||+++|+||+|.++...+... ....
T Consensus 167 -~d~~~l~~~l~~------~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~-~~~~-- 236 (395)
T 3nx3_A 167 -NDISSVEKLVNE------KTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFF-AYEH-- 236 (395)
T ss_dssp -TCHHHHHTTCCT------TEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGG--
T ss_pred -CCHHHHHHhccC------CeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcch-hHHh--
Confidence 278999988874 78888887777777776 678889999999999999999999999875544321 1111
Q ss_pred hccccCCCcEEEEecccccCCCCCceEEEEeecCHHH-HHHHHHh--hcccCCChHHHHHHHHhhCChHHHHHHHHHHHH
Q 019899 157 EAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESV-LAAAKKL--TRFCSISAPTQRLLISMLSDTKFIQEYLETNKR 233 (334)
Q Consensus 157 ~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 233 (334)
.+....+.|+||.++ .|+|+||+++ ++++ .+.+... ...++.+++.+.++.++++..+. ++..++.++
T Consensus 237 ------~~~~~d~~t~sK~~~-~G~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~-~~~~~~~~~ 307 (395)
T 3nx3_A 237 ------AQILPDIMTSAKALG-CGLSVGAFVI-NQKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKE-EKILENVNK 307 (395)
T ss_dssp ------GTCCCSEEEECGGGT-TTSCCEEEEE-CHHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHH-TTHHHHHHH
T ss_pred ------cCCCCCEEEeccccc-CCCceEEEEE-chhhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHh-hHHHHHHHH
Confidence 111222457899998 5999999998 7777 7777653 34567888888888877753221 122233333
Q ss_pred HHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC
Q 019899 234 RIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS 313 (334)
Q Consensus 234 ~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~ 313 (334)
.....++.+.+.+.+++.....+..|.++|++++... +..++...|+ ++||.+.|+. ++++|++++.
T Consensus 308 ~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~------~~~~~~~~l~-~~Gi~v~~~~------~~~iRi~~~~ 374 (395)
T 3nx3_A 308 LTPYLEQSLDELINEFDFCKKRKGLGFMQGLSLDKSV------KVAKVIQKCQ-ENALLLISCG------ENDLRFLPPL 374 (395)
T ss_dssp HHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEECTTS------CHHHHHHHHH-HTTEECEEET------TTEEEECCCT
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEeEEEEEEEEeCCcc------hHHHHHHHHH-HCCCEEecCC------CCEEEEECCC
Confidence 3333333333333333321112234567788887532 2457777855 4799998864 5789999775
Q ss_pred -CCcccHHHHHHHHHHHHHH
Q 019899 314 -LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 314 -~~~~~l~~~l~~l~~~~~~ 332 (334)
.+++++++++++|++++++
T Consensus 375 ~~t~e~i~~~l~~l~~~l~~ 394 (395)
T 3nx3_A 375 ILQKEHIDEMSEKLRKALKS 394 (395)
T ss_dssp TCCHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHh
Confidence 5999999999999999875
No 149
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.96 E-value=5.8e-29 Score=225.79 Aligned_cols=289 Identities=14% Similarity=0.110 Sum_probs=198.1
Q ss_pred hcCCCCCC-CCcEEEecCcHHHHHHHHHHhcC-CCCeEEecCCCCCChhhhhhhcc-------------CcEEEEEeCCC
Q 019899 9 LGQAVSFD-PSQIVLTAGATPAVEILCFCLAD-HGNALLVPSPYYPGFDRDIRFRT-------------GVELIPVHCRS 73 (334)
Q Consensus 9 ~~~~~~~~-~~~i~~~~g~~~~~~~~~~~l~~-~gd~vl~~~p~~~~~~~~~~~~~-------------g~~v~~v~~~~ 73 (334)
+++.++++ +++|++|+|+++++..++..+.. +||+|++++|+|+++........ ..+++.+|.++
T Consensus 95 la~~~~~~~~~~v~~~~gg~ea~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 174 (419)
T 2eo5_A 95 LVTYSPGNFQKKVFFSNSGTEAIEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPN 174 (419)
T ss_dssp HHHHSSCSSCEEEEEESSHHHHHHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCC
T ss_pred HHHhCCCCcCCEEEEeCchHHHHHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCc
Confidence 33334555 78999999999999999987643 48999999999986544221011 23567777632
Q ss_pred CCC--cc------------ccHHHHH-HHHHHHHHcCCceeEEEEeCC-CCCccc-CCCHHHHHHHHHHHHhcCcEEEEe
Q 019899 74 TDN--FA------------FSITALD-QAFNQARKRGVKVRGILICNP-ANPVGN-IIPRETLYELLDFAREKNIHVISD 136 (334)
Q Consensus 74 ~~~--~~------------~~~~~l~-~~l~~~~~~~~~~~~i~~~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~vi~D 136 (334)
... ++ +|+++|+ +++++.. ...+++ +++++| +||||. +.+.+++++|.++|++||+++|+|
T Consensus 175 ~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~-~~~~~~-~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~D 252 (419)
T 2eo5_A 175 PYRNPWHINGYENPSELVNRVIEFIEDYIFVNLV-PPEEVA-GIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDD 252 (419)
T ss_dssp SSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTC-CGGGEE-EEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEE
T ss_pred cccccccccccccchhhHHHHHHHHHHHHHhhcc-CCCCEE-EEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 111 11 4688998 8887410 001455 555677 568896 667888999999999999999999
Q ss_pred ccccccccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHH-HhhcccCCChHHHHHH
Q 019899 137 EIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAK-KLTRFCSISAPTQRLL 214 (334)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 214 (334)
|+|.++.+.+... .+ .... . ..+ +.|+||.++ .| +|+||+++ +++++ .+. .....++.|++++.++
T Consensus 253 E~~~~~g~~g~~~-~~-~~~~---~-~~d---~~t~sK~~~-~G~~riG~~~~-~~~~~-~~~~~~~~t~~~n~~~~~aa 320 (419)
T 2eo5_A 253 EVQMGLGRTGKLF-AI-ENFN---T-VPD---VITLAKALG-GGIMPIGATIF-RKDLD-FKPGMHSNTFGGNALACAIG 320 (419)
T ss_dssp CTTTTTTTTSSSS-GG-GGGT---C-CCS---EEEECGGGG-TTTSCCEEEEE-EGGGC-CC------CCCCCHHHHHHH
T ss_pred ccccCCccCcchh-hH-HhcC---C-CCC---EEEeccccc-CCccceEEEEE-chHhh-cCCcccCCCCCCCHHHHHHH
Confidence 9999876554321 11 1111 1 222 237999999 69 99999998 55665 553 2344567899999888
Q ss_pred HHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEc
Q 019899 215 ISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVT 294 (334)
Q Consensus 215 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~ 294 (334)
.++++.. ++ ..++++++++++.+.|+++ +....+ .|.++|+++++. ..... +...|+ ++||.+.
T Consensus 321 ~aal~~~---~~----~~~~~~~~~~~l~~~L~~~-~~~~~~-~g~~~~i~~~~~-----~~~~~-~~~~l~-~~Gv~v~ 384 (419)
T 2eo5_A 321 SKVIDIV---KD----LLPHVNEIGKIFAEELQGL-ADDVRG-IGLAWGLEYNEK-----KVRDR-IIGESF-KRGLLLL 384 (419)
T ss_dssp HHHHHHH---HH----HHHHHHHHHHHHHHHHTTS-SSEEEE-ETTEEEEECSCH-----HHHHH-HHHHHH-HTTEECE
T ss_pred HHHHHHH---HH----HHHHHHHHHHHHHHHHHHh-hhheEe-eeEEEEEEEecC-----ccHHH-HHHHHH-HCCCEEe
Confidence 8887532 22 6678888899999999876 333333 355667787421 11234 777755 5899999
Q ss_pred CCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 295 PGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 295 ~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
|+. ++++|++++. .+++++++++++|++++++.
T Consensus 385 ~~~------~~~lRis~~~~~t~e~i~~~l~~l~~~l~~~ 418 (419)
T 2eo5_A 385 PAG------RSAIRVIPPLVISEEEAKQGLDILKKVIKVV 418 (419)
T ss_dssp EET------TTEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred cCC------CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 853 5789998774 69999999999999998765
No 150
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.96 E-value=1e-28 Score=227.69 Aligned_cols=292 Identities=14% Similarity=0.092 Sum_probs=202.8
Q ss_pred hhhcCCCCCCCCc----EEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhh--------hhccC--cEEEEEeCC
Q 019899 7 QVLGQAVSFDPSQ----IVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDI--------RFRTG--VELIPVHCR 72 (334)
Q Consensus 7 ~~~~~~~~~~~~~----i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~--------~~~~g--~~v~~v~~~ 72 (334)
+++++.+++++++ |++++|+ +++.+++.+++++||+|++++|+|+++.... . ..| .+++.++++
T Consensus 97 ~~~a~~~g~~~~~~~~~V~~~sGs-~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~-~~G~~~~~v~~~~~ 174 (483)
T 1rv3_A 97 KRALQAYGLDPQCWGVNVQPYSGS-PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKIS-ATSIFFESMAYKVN 174 (483)
T ss_dssp HHHHHHTTCCTTTEEEECCCSSHH-HHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCS-HHHHHSEEEEECBC
T ss_pred HHHHHHhCCCcccCceEEEECCcH-HHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcc-cccceEEEEECccc
Confidence 3334445566543 7787777 8898889999999999999999998876532 2 334 445555443
Q ss_pred CCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccc-cccCCCCcch
Q 019899 73 STDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGG-SIFGNEEFVS 151 (334)
Q Consensus 73 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~-~~~~~~~~~~ 151 (334)
+ +++.+|+++|++++++. ++++|++ +++|++ .++| +++|.++|+++|++|++|++|.. +.+.+....+
T Consensus 175 ~-~~~~iD~d~le~~i~~~-----~tklIi~-~~sn~~-~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p 243 (483)
T 1rv3_A 175 P-DTGYIDYDRLEENARLF-----HPKLIIA-GTSCYS-RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGVVPSP 243 (483)
T ss_dssp T-TTCSBCHHHHHHHHHHH-----CCSEEEE-CCSSCC-SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCG
T ss_pred c-CCCcCCHHHHHHHHhhc-----CCcEEEE-eCCcCC-CcCC---HHHHHHHHHHcCCEEEEEccchhcccccCCCCCC
Confidence 2 45789999999999843 8998888 888888 8888 99999999999999999999863 2221211111
Q ss_pred hhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCH--------------HHHHHHHHhhc---ccCCChHHHHHH
Q 019899 152 MAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNE--------------SVLAAAKKLTR---FCSISAPTQRLL 214 (334)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~--------------~~~~~~~~~~~---~~~~~~~~~~~~ 214 (334)
+ .+.++++.|+||++ .|.|.||++++++ ++.+.+..... .++.+.....++
T Consensus 244 ~----------~~~div~~s~~K~l--~GprgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal 311 (483)
T 1rv3_A 244 F----------EHCHVVTTTTHKTL--RGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGV 311 (483)
T ss_dssp G----------GTCSEEEEESSGGG--CCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHH
T ss_pred C----------CCCcEEEecCcccC--CCCCceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHH
Confidence 1 13457889999988 5667899999553 24444433221 223344445555
Q ss_pred HHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC-ceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEE
Q 019899 215 ISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESS-AGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINV 293 (334)
Q Consensus 215 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v 293 (334)
..++.... ...+.++.+++.++++++.+.|++.|+++..+. .++++|++++... .+..++... |++.||.+
T Consensus 312 ~~Al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~g-----~~~~~~~~~-L~~~gI~v 383 (483)
T 1rv3_A 312 AVALKQAM--TPEFKEYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRSKG-----TDGGRAEKV-LEACSIAC 383 (483)
T ss_dssp HHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEEGGGGT-----CCHHHHHHH-HHHTTEEC
T ss_pred HHHHHHHh--ChhHHHHHHHHHHHHHHHHHHHHhcCCEeccCCCCCceEEEeccCCC-----CCHHHHHHH-HHhCCcEE
Confidence 54443211 234567788899999999999999899877653 3567788886421 123455555 67799999
Q ss_pred c----CCCCcCCCCCCeEEEEecC-CC----cccHHHHHHHHHHHHHH
Q 019899 294 T----PGSACHCIEPGWFRCCFTS-LT----HEDIPLVIERIQKVAET 332 (334)
Q Consensus 294 ~----~g~~~~~~~~~~iRi~~~~-~~----~~~l~~~l~~l~~~~~~ 332 (334)
. ||..+. -.++++||+++. .+ ++|++++++.|.++++.
T Consensus 384 ~~~~~pg~~~~-~~~~~iRis~~~~~t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 384 NKNTCPGDKSA-LRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp EEECCSSCSCT-TSCCEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCCCcC-CCCceEEeecCCcccCCCCHHHHHHHHHHHHHHHHh
Confidence 8 887432 235799999984 24 89999999999998864
No 151
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.96 E-value=2.8e-27 Score=214.73 Aligned_cols=278 Identities=15% Similarity=0.155 Sum_probs=195.3
Q ss_pred hhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhh----hhhccCcEEEEEeCCCCCCccccH
Q 019899 6 SQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRD----IRFRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 6 ~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
++.++...+.+ +.+++++++++++.++.+++++||+|+++.++|+++... ++ ..|.+++.++.. |+
T Consensus 120 ~~~lA~l~g~~--~~v~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~-~~G~~v~~v~~~-------d~ 189 (445)
T 1qgn_A 120 EEKISALEGAE--STLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILP-KMGITATVIDPA-------DV 189 (445)
T ss_dssp HHHHHHHHTCS--EEEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGG-GGTCEEEEECSS-------CH
T ss_pred HHHHHHHhCCC--cEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHH-HcCCEEEEeCCC-------CH
Confidence 33444334433 445555556999999999999999999999999987764 44 679999999852 79
Q ss_pred HHHHHHHHHHHHcCCce-eEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 82 TALDQAFNQARKRGVKV-RGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~-~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
+++++++++ ++ ++|++++|+||||.+.| +++|.++|+++|+++|+|++|...... .+ +
T Consensus 190 ~~l~~ai~~------~tv~lV~le~p~NptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~~----~~---~----- 248 (445)
T 1qgn_A 190 GALELALNQ------KKVNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLNQ----KA---L----- 248 (445)
T ss_dssp HHHHHHHHH------SCEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC----CT---T-----
T ss_pred HHHHHHhcc------CCCCEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC----Cc---c-----
Confidence 999999987 67 99999999999999999 899999999999999999999753321 11 1
Q ss_pred cCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHHhhcccC--CChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKKLTRFCS--ISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
+.+.++++.|+||.+|..| +++|++++ ++++++.+......++ .++.....+...++. +..+.+++.+
T Consensus 249 -~~g~Div~~S~sK~~gg~gd~~~G~l~~-~~~l~~~l~~~~~~~g~~~~~~~a~~~~~~l~~-------l~~r~~~~~~ 319 (445)
T 1qgn_A 249 -ALGADLVLHSATKFLGGHNDVLAGCISG-PLKLVSEIRNLHHILGGALNPNAAYLIIRGMKT-------LHLRVQQQNS 319 (445)
T ss_dssp -TTTCSEEEECTTTTTTCSSSCCCEEEEE-CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHGGG-------HHHHHHHHHH
T ss_pred -ccCCEEEEECCcccccccccceEEEEEE-CHHHHHHHHHHHHHhCCCCCHHHHHHHHHhHHH-------HHHHHHHHHH
Confidence 1456789999999997554 47999998 7888888876544433 344443444333332 1233345556
Q ss_pred HHHHHHHHHHhC-CC-cccCC----------------CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCc
Q 019899 238 LYDSFVAGLKQL-GI-RCSES----------------SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSAC 299 (334)
Q Consensus 238 ~~~~~~~~l~~~-g~-~~~~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~ 299 (334)
+++++.+.|+++ ++ .+..| ..|.++++.++.. ......+... ++..++.+..|..+
T Consensus 320 ~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~-----~~~~~~~l~~-l~~~~i~~s~G~~~ 393 (445)
T 1qgn_A 320 TALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGD-----LLTTAKFVDA-LKIPYIAPSFGGCE 393 (445)
T ss_dssp HHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSC-----HHHHHHHHHH-CSSSEECSCCCSSS
T ss_pred HHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCC-----HHHHHHHHHh-CCCceEeccCCCCc
Confidence 677888888776 33 22222 1344567777641 1123344444 44357777777765
Q ss_pred CC---------------------CCCCeEEEEecCCCcccHHHHHHHHHHHHHH
Q 019899 300 HC---------------------IEPGWFRCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 300 ~~---------------------~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
.. ..++.+|+|++ .||++++++.|++++++
T Consensus 394 sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG---~Edid~li~~L~~al~~ 444 (445)
T 1qgn_A 394 SIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFG---VEDFDDLKADILQALDS 444 (445)
T ss_dssp CEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECC---SSCHHHHHHHHHHHHHH
T ss_pred eeeecccccccccCCHHHHHhcCCCCCeEEEEec---cCCHHHHHHHHHHHHhh
Confidence 31 12478999998 67899999999999875
No 152
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.96 E-value=8.5e-28 Score=221.17 Aligned_cols=299 Identities=16% Similarity=0.209 Sum_probs=202.3
Q ss_pred CcEEEecCcHHHHHHHHHHhcC----CCCe---EEecCCCCCChhhhhhhccCcEEEEEeCCC---C-----CCccccHH
Q 019899 18 SQIVLTAGATPAVEILCFCLAD----HGNA---LLVPSPYYPGFDRDIRFRTGVELIPVHCRS---T-----DNFAFSIT 82 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l~~----~gd~---vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~---~-----~~~~~~~~ 82 (334)
+++++|+|+++|+..++.++.+ +||+ |+++.+.|..+...+. ..|.+++.++... . .++.+|++
T Consensus 92 ~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~viv~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~ 170 (467)
T 1ax4_A 92 DYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVE-LNGCKAINIVTEKAFDSETYDDWKGDFDIK 170 (467)
T ss_dssp CEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHHHHHHH-HTTCEEEECBCGGGGCTTSCCTTTTCBCHH
T ss_pred CcEEEcCCcHHHHHHHHHHHHHhhccCCCccceEEEeccccchhhHHHh-ccCCceecccccccccccccCCcccccCHH
Confidence 7899999999999999999988 9998 9998666677677777 7898888776421 1 13468999
Q ss_pred HHHHHHHHHHHcCCceeEEEEeCCCCCc-ccCCCHHHHHHHHHHHHhcCcEEEEeccccc---c-------ccCCCCcch
Q 019899 83 ALDQAFNQARKRGVKVRGILICNPANPV-GNIIPRETLYELLDFAREKNIHVISDEIYGG---S-------IFGNEEFVS 151 (334)
Q Consensus 83 ~l~~~l~~~~~~~~~~~~i~~~~p~npt-G~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~---~-------~~~~~~~~~ 151 (334)
+|++++++.. ..++++|++++|+||+ |.+++.+++++|.++|++||++||+|+++.. + .+.+. +
T Consensus 171 ~le~~i~~~~--~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~---~ 245 (467)
T 1ax4_A 171 KLKENIAQHG--ADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNA---T 245 (467)
T ss_dssp HHHHHHHHHC--GGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTC---C
T ss_pred HHHHHHHhcC--CCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCC---c
Confidence 9999998631 1268999999999999 8999999999999999999999999998543 0 12222 2
Q ss_pred hhhhhhccccCCCcEEEEecccccCCCC-CceEEEEeecCH-HHHHHHHHhhcc------c-CCChHHHHHHHHhhCChH
Q 019899 152 MAEILEAEEVDKDRVHIIYGLSKDLSLP-GFRTGVIYSYNE-SVLAAAKKLTRF------C-SISAPTQRLLISMLSDTK 222 (334)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~s~sK~~~~~-g~r~g~i~~~~~-~~~~~~~~~~~~------~-~~~~~~~~~~~~~l~~~~ 222 (334)
...+.++ +....++++.|+||.+|++ | |+++.+++ ++.+.+...... + ..+.....++...+....
T Consensus 246 ~~~~~~~--~~~~~d~~~~s~sK~~g~~~G---g~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~ 320 (467)
T 1ax4_A 246 IKEVIFD--MYKYADALTMSAKKDPLLNIG---GLVAIRDNEEIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGT 320 (467)
T ss_dssp HHHHHHH--HGGGCSEEEEETTSTTCCSSC---EEEEESSCHHHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTT
T ss_pred hhhhhhh--hccccceEEEeccccCCCCcc---eEEEeCCHHHHHHHHHhhccccccccccCCccchHHHHHHHHHHHhh
Confidence 2222100 0001124568999999865 3 77777546 787776644221 1 222222332222222110
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCC--CChhhHHHHHHHHHHhcCeEEcC-CCCc
Q 019899 223 FIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPS--YSEKGELELWDKLLNIAKINVTP-GSAC 299 (334)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~gi~v~~-g~~~ 299 (334)
. ++.+ ++..++++++.+.|++.++++..+.+++++|+++...... ....+..++...|++++||.+.| |..+
T Consensus 321 ~-~~~~----~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~ 395 (467)
T 1ax4_A 321 E-EEYL----HYRIGQVKYLGDRLREAGIPIQYPTGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFL 395 (467)
T ss_dssp C-HHHH----HHHHHHHHHHHHHHHHTTCCBCSSCCSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHH
T ss_pred h-hhHH----HHHHHHHHHHHHHHHhCCCCcccCCCceEEEEehhhhccccccCCCCHHHHHHHHHHhcCceeeecCccc
Confidence 0 1122 2223556778888877788877788899999984321110 01124567888875779999998 6532
Q ss_pred -CC---------CCCCeEEEEec-C-CCcccHHHHHHHHHHHHHH
Q 019899 300 -HC---------IEPGWFRCCFT-S-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 300 -~~---------~~~~~iRi~~~-~-~~~~~l~~~l~~l~~~~~~ 332 (334)
+. ...+++|++++ . .+++++++++++|++++++
T Consensus 396 ~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~ 440 (467)
T 1ax4_A 396 LGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEK 440 (467)
T ss_dssp HCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHH
T ss_pred cccccccccccccccceEEEecccccCCHHHHHHHHHHHHHHHHh
Confidence 11 01378999998 3 6899999999999988865
No 153
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.96 E-value=4.7e-28 Score=222.33 Aligned_cols=299 Identities=9% Similarity=-0.003 Sum_probs=197.9
Q ss_pred CCCCCCcEEEecCcHHHHHHHHHHhcC--------CCCeEEecCCCCCChhhhhhhc------------cCcEEEEEeCC
Q 019899 13 VSFDPSQIVLTAGATPAVEILCFCLAD--------HGNALLVPSPYYPGFDRDIRFR------------TGVELIPVHCR 72 (334)
Q Consensus 13 ~~~~~~~i~~~~g~~~~~~~~~~~l~~--------~gd~vl~~~p~~~~~~~~~~~~------------~g~~v~~v~~~ 72 (334)
.+.+.++|++++|+++|+..++..+.+ ++++|++.+|+|+++....... ....+..++.+
T Consensus 108 ~~~~~~~v~~~~gGseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 187 (460)
T 3gju_A 108 APKGMSRVYFGLSGSDANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAP 187 (460)
T ss_dssp SCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCC
T ss_pred CCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCC
Confidence 445778999999999999999988863 5689999999998765433201 11234555532
Q ss_pred CC---CCcccc--------HHHHHHHHHHHHHcCCceeEEEEeCCCCCccc-CCCHHHHHHHHHHHHhcCcEEEEecccc
Q 019899 73 ST---DNFAFS--------ITALDQAFNQARKRGVKVRGILICNPANPVGN-IIPRETLYELLDFAREKNIHVISDEIYG 140 (334)
Q Consensus 73 ~~---~~~~~~--------~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~-~~~~~~l~~i~~~~~~~~~~vi~D~~~~ 140 (334)
.. +++..+ +++|++++++.. ..++++|++..++|++|. +.+.+.+++|.++|++||+++|+||+|.
T Consensus 188 ~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~--~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~ 265 (460)
T 3gju_A 188 YYFRRTDRSMSEEQFSQHCADKLEEMILAEG--PETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVT 265 (460)
T ss_dssp CGGGCSCTTCCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT
T ss_pred ccccCCccccChhHHHHHHHHHHHHHHHhcC--CCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc
Confidence 11 111222 688888887421 125666666555778887 6678889999999999999999999999
Q ss_pred ccccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHH---------hhcccCCChHH
Q 019899 141 GSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKK---------LTRFCSISAPT 210 (334)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~---------~~~~~~~~~~~ 210 (334)
++.+.|..+ ..... + . .. .+.++||+++ .| +|+||+++ ++++++.+.. ....++.++++
T Consensus 266 g~gr~g~~~-~~~~~-~---~-~p---di~t~sK~l~-gG~~~lg~v~~-~~~i~~~~~~~~~~~~~~~~~~t~~~~~~~ 334 (460)
T 3gju_A 266 GFGRLGTMF-GSDHY-G---I-KP---DLITIAKGLT-SAYAPLSGVIV-ADRVWQVLVQGSDKLGSLGHGWTYSAHPIC 334 (460)
T ss_dssp TTTTTSSSC-HHHHH-T---C-CC---SEEEECGGGT-TTSSCCEEEEE-EHHHHHHHHHHHHHHCSCSCCCTTTTCHHH
T ss_pred CCCcccccc-hHhhc-C---C-CC---Ceeeeehhhc-CCCCCeEEEEE-CHHHHHHHhcccccccccccCCCCCCCHHH
Confidence 876555322 11111 1 1 11 1347899997 56 89999998 8899888862 23456788999
Q ss_pred HHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-cccCCCceeEEeeecCCcCCCC-----ChhhHHHHHHH
Q 019899 211 QRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGI-RCSESSAGLYCWADMSGLIPSY-----SEKGELELWDK 284 (334)
Q Consensus 211 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~-~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~~~~~~ 284 (334)
+.++.++++..+. ++..++.++.....++.+.+.+++++. ....+ .|.++++++....... ......++...
T Consensus 335 ~aaa~aal~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (460)
T 3gju_A 335 VAAGVANLELIDE-MDLVTNAGETGAYFRAELAKAVGGHKNVGEVRG-DGMLAAVEFVADKDDRVFFDASQKIGPQVATA 412 (460)
T ss_dssp HHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEE-ETTEEEEEECSBTTTTBCCCGGGCHHHHHHHH
T ss_pred HHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEee-eeEEEEEEEccCccccccccchHHHHHHHHHH
Confidence 9888888764321 223344444444455555555555432 22333 3556667776432210 01124467777
Q ss_pred HHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 285 LLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 285 ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
+++ +||.+.|+. .++++||+++. .+++++++++++|++++++
T Consensus 413 l~~-~Gv~v~~~~-----~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 455 (460)
T 3gju_A 413 LAA-SGVIGRAMP-----QGDILGFAPPLCLTREQADIVVSKTADAVKS 455 (460)
T ss_dssp HHH-TTEECEECS-----SSCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHH-CCeEEecCC-----CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 555 799999865 25789999764 6999999999999999875
No 154
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.96 E-value=1.2e-28 Score=226.88 Aligned_cols=290 Identities=15% Similarity=0.130 Sum_probs=209.3
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHh----cCCCC-----eEEecCCCCCChhhhhhhccCcEEEEEeCC
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCL----ADHGN-----ALLVPSPYYPGFDRDIRFRTGVELIPVHCR 72 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l----~~~gd-----~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~ 72 (334)
++++.+.++ ++. .+++++|+++++..++.++ .++|| +|+++.|+|+++...++ ..|.+++.++++
T Consensus 113 ~~~la~~~g----~~~-~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~-~~G~~vv~v~~~ 186 (474)
T 1wyu_B 113 GEYLKALTG----MDA-ITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATAS-MAGYQVREIPSG 186 (474)
T ss_dssp HHHHHHHHT----CSE-EECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHH-HTTCEEEEECBC
T ss_pred HHHHHHHHC----CCc-eeecChHHHHHHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHHHH-HCCCEEEEecCC
Confidence 345555444 333 4668899999998765554 35777 99999999999999888 899999999984
Q ss_pred CCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccC-CCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcch
Q 019899 73 STDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNI-IPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVS 151 (334)
Q Consensus 73 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~ 151 (334)
.++.+|+++|++++++ ++++|++++| ||+|.+ .+ +++|.++|+++|+++|+|++|..+.++ . ..
T Consensus 187 --~~~~~d~~~L~~~i~~------~t~~v~~~~p-n~~G~~~~~---l~~i~~l~~~~g~~li~Dea~~~~~~g-~--~~ 251 (474)
T 1wyu_B 187 --PEGEVDLEALKRELGP------HVAALMLTNP-NTLGLFERR---ILEISRLCKEAGVQLYYDGANLNAIMG-W--AR 251 (474)
T ss_dssp --TTSSBCHHHHHHHCST------TEEEEEECSS-CTTSCCCTT---HHHHHHHHHHHTCEEEEEGGGGGGTTT-T--CC
T ss_pred --CCCCcCHHHHHHhhCC------CceEEEEECC-CCCcccCCC---HHHHHHHHHHcCCEEEEeCchhhhhcc-C--CC
Confidence 4568999999999975 7899999998 689988 35 999999999999999999999865542 1 11
Q ss_pred hhhhhhccccCCCcEEEEecccccCCCC-C---ceEEEEeecCHHHHHHHHH-h--------------------hcccCC
Q 019899 152 MAEILEAEEVDKDRVHIIYGLSKDLSLP-G---FRTGVIYSYNESVLAAAKK-L--------------------TRFCSI 206 (334)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~s~sK~~~~~-g---~r~g~i~~~~~~~~~~~~~-~--------------------~~~~~~ 206 (334)
... .+.++++.|+||+++.+ | +|+||+++ ++++.+.+.. . ...++.
T Consensus 252 ~~~--------~g~di~~~s~~K~~~~p~g~gG~~~G~~~~-~~~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 322 (474)
T 1wyu_B 252 PGD--------MGFDVVHLNLHKTFTVPHGGGGPGSGPVGV-KAHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYG 322 (474)
T ss_dssp HHH--------HTCSEEECCTTTTTCCCCTTSCCCCCCEEE-CGGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTS
T ss_pred ccc--------CCCcEEEEeCccccccCCCCCCCCeEEEEE-cHHHHHhCCCCeeeccCCeeEecccCcccCcccccCcC
Confidence 111 34568888999999766 3 58999999 6666555531 0 011234
Q ss_pred ChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcee-EEeeecCCcCCCCChhhHHHHHHHH
Q 019899 207 SAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAGL-YCWADMSGLIPSYSEKGELELWDKL 285 (334)
Q Consensus 207 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~l 285 (334)
+...+.++..++.... .+.+.+..+++.++++++.+.|++.|+++..+...+ .+|++++.. .+..++..+|
T Consensus 323 ~~~~~~aa~~~l~~~g--~~~l~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~L 394 (474)
T 1wyu_B 323 NFLALVRAWAYIRTLG--LEGLKKAAALAVLNARYLKELLKEKGYRVPYDGPSMHEFVAQPPEG------FRALDLAKGL 394 (474)
T ss_dssp CHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTCBCSSCSSCCSCEEEBCSTT------CCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhhcCcEecCCCCcceEEEEEcCCC------CCHHHHHHHH
Confidence 5566666666654321 455677788899999999999988887764332222 145565321 2346788886
Q ss_pred HHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHH
Q 019899 286 LNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAE 331 (334)
Q Consensus 286 l~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~ 331 (334)
++ +||.+ |+..|+...++++|++++. .+++++++++++|+++++
T Consensus 395 ~~-~Gi~~-~~~~~~~~~~~~lRis~~~~~t~e~id~~~~~L~~~~~ 439 (474)
T 1wyu_B 395 LE-LGFHP-PTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGALLK 439 (474)
T ss_dssp HH-TTCCC-CEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHHHHT
T ss_pred HH-CCccc-cccccccccCCEEEEEeecCCCHHHHHHHHHHHHHHHH
Confidence 65 69985 5655543336789999984 489999999999998875
No 155
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.96 E-value=1.6e-28 Score=222.75 Aligned_cols=283 Identities=12% Similarity=0.065 Sum_probs=190.1
Q ss_pred CCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChh---hhhhhccC--cEEEEEeCCCCCCccccHHHHHHH
Q 019899 13 VSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFD---RDIRFRTG--VELIPVHCRSTDNFAFSITALDQA 87 (334)
Q Consensus 13 ~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~---~~~~~~~g--~~v~~v~~~~~~~~~~~~~~l~~~ 87 (334)
++++++++++++| ++++..++.+++++||+|+++.|+|+++. .... ..| ..++.++. ++++.+|+++++++
T Consensus 89 ~~~~~~~v~~~sG-s~a~~~a~~~~~~~gd~v~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~--~~~~~~d~~~l~~~ 164 (420)
T 3gbx_A 89 FGADYANVQPHSG-SQANFAVYTALLQPGDTVLGMNLAQGGHLTHGSPVN-FSGKLYNIVPYGI--DESGKIDYDEMAKL 164 (420)
T ss_dssp HTCSEEECCCSSH-HHHHHHHHHHHCCTTCEEEEEEEC-------------CHHHHSEEEEEEE--CTTCSCCHHHHHHH
T ss_pred hCCCCceeEecCc-HHHHHHHHHHhcCCCCEEEecchhhcceeccchhhh-hcccceeEEeccC--CccCCcCHHHHHHH
Confidence 4556666766665 88999999999999999999999998744 2222 333 34455555 35667999999999
Q ss_pred HHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccc-cCCCCcchhhhhhhccccCCCcE
Q 019899 88 FNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSI-FGNEEFVSMAEILEAEEVDKDRV 166 (334)
Q Consensus 88 l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 166 (334)
+++. ++++|++++|+||+ ..+ +++|.++|++||+++|+||+|+... +.+.....+ ...+
T Consensus 165 i~~~-----~~~~v~~~~~~~~~--~~~---l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~----------~~~d 224 (420)
T 3gbx_A 165 AKEH-----KPKMIIGGFSAYSG--VVD---WAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPV----------PHAH 224 (420)
T ss_dssp HHHH-----CCSEEEECCTTCCS--CCC---HHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCST----------TTSS
T ss_pred HHhc-----CCeEEEEecCccCC--ccC---HHHHHHHHHHcCCEEEEECCcchhceecccCCccc----------ccCC
Confidence 9874 68999998998874 666 8999999999999999999976432 222111111 2345
Q ss_pred EEEecccccCCCCCceEEEEeecC--HHHHHHHHHhhccc---CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHH
Q 019899 167 HIIYGLSKDLSLPGFRTGVIYSYN--ESVLAAAKKLTRFC---SISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDS 241 (334)
Q Consensus 167 ~~~~s~sK~~~~~g~r~g~i~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 241 (334)
+++.|+||+++ |.+.||+++++ +++.+.+......+ +.+...+.++...+.. ..++.+.++++++.+++++
T Consensus 225 i~~~s~sK~~~--g~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~--~~~~~~~~~~~~~~~~~~~ 300 (420)
T 3gbx_A 225 VVTTTTHKTLA--GPRGGLILAKGGDEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKE--AMEPEFKVYQQQVAKNAKA 300 (420)
T ss_dssp EEEEESSGGGC--SCSCEEEEESSCCHHHHHHHHHHHC----CCCCHHHHHHHHHHHHH--TTSHHHHHHHHHHHHHHHH
T ss_pred EEEeecccCCC--CCCceEEEEcCCcHHHHHHhhhhcCCCCCCCcchhHHHHHHHHHHH--HHhHhHHHHHHHHHHHHHH
Confidence 88999999994 44459999844 37777776543332 2233333333333211 1123456778888899999
Q ss_pred HHHHHHhCCCcccCC-CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcC-------CCCcCCCCCCeEEEEecC
Q 019899 242 FVAGLKQLGIRCSES-SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTP-------GSACHCIEPGWFRCCFTS 313 (334)
Q Consensus 242 ~~~~l~~~g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~-------g~~~~~~~~~~iRi~~~~ 313 (334)
+.+.|++.|+++..+ ..++++|+.++.... +...+... ++++||.+.| +..++ ++.+|++++.
T Consensus 301 l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-l~~~gi~v~~~~~~~~~~~~~~---~~~iRi~~~~ 371 (420)
T 3gbx_A 301 MVEVFLNRGYKVVSGGTENHLFLLDLVDKNL-----TGKEADAA-LGRANITVNKNSVPNDPKSPFV---TSGIRIGSPA 371 (420)
T ss_dssp HHHHHHHTTCEEGGGSCSSSEEEEECGGGTC-----CHHHHHHH-HHHTTEECEEECCTTCSSCTTT---CSEEEEECHH
T ss_pred HHHHHHhcCCeeccCCCCCeEEEEEcCCCCC-----CHHHHHHH-HHHCCcEeccccCCCCccccCC---CcceEEecch
Confidence 999999888887653 456778888764211 23344444 6778999988 33332 3569999863
Q ss_pred -----CCcccHHHHHHHHHHHHHH
Q 019899 314 -----LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 314 -----~~~~~l~~~l~~l~~~~~~ 332 (334)
.++++++++++.|++++++
T Consensus 372 ~~~~~~~~~~i~~~~~~l~~~l~~ 395 (420)
T 3gbx_A 372 VTRRGFKEAEVKELAGWMCDVLDN 395 (420)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred hcccCCCHHHHHHHHHHHHHHHhC
Confidence 3578999999999998865
No 156
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.96 E-value=3.5e-28 Score=218.78 Aligned_cols=275 Identities=15% Similarity=0.152 Sum_probs=199.9
Q ss_pred CcEEEecCcHHHHHHHHHHh-cCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCC
Q 019899 18 SQIVLTAGATPAVEILCFCL-ADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGV 96 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l-~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~ 96 (334)
+++++++|+++++..++.++ +++||+|+++.|+|+++...++ ..|.+++.+++++ +++.+|++++++++++
T Consensus 55 ~~~~~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~-~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~------ 126 (393)
T 1mdo_A 55 QYAVAVSSATAGMHIALMALGIGEGDEVITPSMTWVSTLNMIV-LLGANPVMVDVDR-DTLMVTPEHIEAAITP------ 126 (393)
T ss_dssp SEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHHHHHHH-HTTCEEEEECBCT-TTCCBCHHHHHHHCCT------
T ss_pred CcEEEecChHHHHHHHHHHcCCCCCCEEEeCCCccHhHHHHHH-HCCCEEEEEeccC-CcCCCCHHHHHHhcCC------
Confidence 48999999999999999999 8999999999999999999888 8999999999853 4568999999999875
Q ss_pred ceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEecccccc-ccCCCCcchhhhhhhccccCCCcEEEEeccc--
Q 019899 97 KVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGS-IFGNEEFVSMAEILEAEEVDKDRVHIIYGLS-- 173 (334)
Q Consensus 97 ~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s-- 173 (334)
++++|+++ ||||.+.+ +++|.++|+++|+++|+|++|+.+ .+.+. . + + . .++++.|+|
T Consensus 127 ~~~~v~~~---~~~G~~~~---~~~i~~l~~~~~~~li~D~a~~~g~~~~~~---~---~-~-----~-~d~~~~S~~k~ 187 (393)
T 1mdo_A 127 QTKAIIPV---HYAGAPAD---LDAIYALGERYGIPVIEDAAHATGTSYKGR---H---I-G-----A-RGTAIFSFHAI 187 (393)
T ss_dssp TEEEECCB---CGGGCCCC---HHHHHHHHHHHTCCBCEECTTCTTCEETTE---E---T-T-----S-SSEEEEECCTT
T ss_pred CceEEEEe---CCCCCcCC---HHHHHHHHHHcCCeEEEECccccCCeECCe---e---c-C-----C-CCeEEEeCCCC
Confidence 78877765 48999988 999999999999999999999863 23221 1 1 0 1 568889999
Q ss_pred ccCCCCCceEEEEeecCHHHHHHHHHhhccc--------------------------CCChHHHHHHHHhhCChHHHHHH
Q 019899 174 KDLSLPGFRTGVIYSYNESVLAAAKKLTRFC--------------------------SISAPTQRLLISMLSDTKFIQEY 227 (334)
Q Consensus 174 K~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~l~~~~~~~~~ 227 (334)
|.++ |.+.||++++++++.+.++...... ..+++...+....+. .
T Consensus 188 K~l~--~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~-------~ 258 (393)
T 1mdo_A 188 KNIT--CAEGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQ-------K 258 (393)
T ss_dssp SSSC--SSSCEEEEESCHHHHHHHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHHH-------T
T ss_pred Cccc--cccceEEEeCCHHHHHHHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHHH-------H
Confidence 7664 4589999985688888887543211 112222222222221 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccC-C-----CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcC-
Q 019899 228 LETNKRRIKKLYDSFVAGLKQLGIRCSE-S-----SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACH- 300 (334)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~-~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~- 300 (334)
+.+..++.+++++++.+.|++.++++.. + .+++++|+.++.... ..+..++...|. ++||.+.+|..+.
T Consensus 259 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~l~~~l~-~~gi~v~~~~~~~~ 334 (393)
T 1mdo_A 259 LDALNARRAAIAAQYHQAMADLPFQPLSLPSWEHIHAWHLFIIRVDEARC---GITRDALMASLK-TKGIGTGLHFRAAH 334 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSSCEECCCCSSCEECCCSCEEEECCHHHH---SSCHHHHHHHHH-HTTBCCBCCCCCGG
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCCCceeEEEEEEeccccc---ccCHHHHHHHHH-hCCCCcccccCccc
Confidence 3344555667788899999887766542 2 345678888873100 013457777754 5899999877541
Q ss_pred -------------CC-----CCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 301 -------------CI-----EPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 301 -------------~~-----~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
.. ....+|++++. .+++|++++++.|+++++.
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~ 385 (393)
T 1mdo_A 335 TQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQIAGQ 385 (393)
T ss_dssp GSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHHHC-
T ss_pred cChhhhccCCccCChhHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHhc
Confidence 00 13479999885 6999999999999998865
No 157
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.96 E-value=3e-28 Score=214.20 Aligned_cols=274 Identities=15% Similarity=0.131 Sum_probs=186.0
Q ss_pred hhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhh---hccCcEEEEEeCCCCCCccccHHH
Q 019899 7 QVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIR---FRTGVELIPVHCRSTDNFAFSITA 83 (334)
Q Consensus 7 ~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~---~~~g~~v~~v~~~~~~~~~~~~~~ 83 (334)
+.+++.++.+ +.++++++++++..++.++.++||+|+++.|+|+++...+. ...|.+++.++. .|+++
T Consensus 5 ~~la~~~g~~--~~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~ 75 (331)
T 1pff_A 5 GKIAKLEHAE--ACAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM-------AVPGN 75 (331)
T ss_dssp HHHHHHHTCS--EEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT-------TSTTH
T ss_pred HHHHHHhCCC--eEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC-------CCHHH
Confidence 3333334443 44555555899999999999999999999999999877763 147999999885 47888
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHh-cCcEEEEeccccccccCCCCcchhhhhhhccccC
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFARE-KNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVD 162 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~-~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (334)
+++++++ ++++|++++|+||||.+++ +++|.++|++ +|+++|+|++|+.+.+. .+. .
T Consensus 76 l~~~i~~------~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~----~~~----~----- 133 (331)
T 1pff_A 76 IEKHLKP------NTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILT----NPL----D----- 133 (331)
T ss_dssp HHHTCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHC----CGG----G-----
T ss_pred HHHhhcC------CCeEEEEECCCCCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccC----Chh----h-----
Confidence 9888875 7899999999999999999 9999999999 99999999999864432 111 1
Q ss_pred CCcEEEEecccccCCCCCce-EEEEeecCH-HHHHHHHHhhcc-c--CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 163 KDRVHIIYGLSKDLSLPGFR-TGVIYSYNE-SVLAAAKKLTRF-C--SISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 163 ~~~~~~~~s~sK~~~~~g~r-~g~i~~~~~-~~~~~~~~~~~~-~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
.+.++++.|+||+++.+|.| .||+++ ++ ++.+.++..... + +.++..+.++...+.. + ..+.+...+
T Consensus 134 ~~~d~~~~s~~K~~~~~~~r~~G~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~---~----~~~~~~~~~ 205 (331)
T 1pff_A 134 LGVDIVVHSATKYINGHTDVVAGLVCS-RADIIAKVKSQGIKDITGAIISPHDAWLITRGTLT---L----DMRVKRAAE 205 (331)
T ss_dssp GTCSEEEEETTTTTSSSSSCCCEEEEE-CHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHH---H----HHHHHHHHH
T ss_pred cCCcEEEEECccccCCCCCceEEEEEe-CcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcch---H----HHHHHHHHH
Confidence 46788999999999889999 799998 66 888888876554 3 4566666555444432 1 222233334
Q ss_pred HHHHHHHHHHhC---------------CCcccC---CCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCC-
Q 019899 238 LYDSFVAGLKQL---------------GIRCSE---SSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSA- 298 (334)
Q Consensus 238 ~~~~~~~~l~~~---------------g~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~- 298 (334)
+.+.+.+.+++. ++++.. ...+.++++.++. ..++.. +++++||.+++.+.
T Consensus 206 ~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~-~l~~~gI~~~~~s~g 275 (331)
T 1pff_A 206 NAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVDG---------LEKAKK-VLDNCHVVSLAVSLG 275 (331)
T ss_dssp HHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECSS---------HHHHHH-HHHTCSSSEECSSCC
T ss_pred HHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC---------HHHHHH-HHHhCCCceeccCCC
Confidence 444444444332 111111 1123345566541 234444 47779997765421
Q ss_pred --------cC---------------CCCCCeEEEEecC-CCcccHHHHHHHHHHH
Q 019899 299 --------CH---------------CIEPGWFRCCFTS-LTHEDIPLVIERIQKV 329 (334)
Q Consensus 299 --------~~---------------~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~ 329 (334)
|. ...++++|++++. .++++++.+++.|+++
T Consensus 276 ~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~~ 330 (331)
T 1pff_A 276 GPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDLV 330 (331)
T ss_dssp SSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHTC
T ss_pred CcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHHh
Confidence 10 0125799999995 4667777777776643
No 158
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.96 E-value=5.2e-27 Score=210.68 Aligned_cols=275 Identities=16% Similarity=0.156 Sum_probs=189.8
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhh----hhccCcEEEEEeCCCCCCcccc
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDI----RFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
+++.+++.++.+ +.+++++| ++++..++.++.++||+|+++.|+|++....+ + ..|.+++.++. .|
T Consensus 57 l~~~la~~~~~~-~~i~~~sG-t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~-------~d 126 (386)
T 1cs1_A 57 VQRALAELEGGA-GAVLTNTG-MSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAK-RGCYRVLFVDQ-------GD 126 (386)
T ss_dssp HHHHHHHHHTCS-EEEEESSH-HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHT-TTSCEEEEECT-------TC
T ss_pred HHHHHHHHhCCC-cEEEeCCH-HHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHH-hcCCEEEEeCC-------CC
Confidence 334444444444 55666555 99999999999999999999999999855543 4 67999999885 27
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
++++++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+.+.+.. +. .
T Consensus 127 ~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~----~~----~--- 186 (386)
T 1cs1_A 127 EQALRAALAE------KPKLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQN----PL----A--- 186 (386)
T ss_dssp HHHHHHHHHT------CCSEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC----GG----G---
T ss_pred HHHHHHhhcc------CCcEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC----cc----c---
Confidence 8999999975 7899999999999999998 9999999999999999999998765421 11 1
Q ss_pred cCCCcEEEEecccccCCCCCceE-EEEeecCHHHHHHHHHhhcc--cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRT-GVIYSYNESVLAAAKKLTRF--CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKK 237 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~-g~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 237 (334)
.+.++++.|+||+++.+|.++ ||++++++++.+.+...... ++.++..+.++...++.. ....+.+.+
T Consensus 187 --~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~ 257 (386)
T 1cs1_A 187 --LGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRTL-------VPRMELAQR 257 (386)
T ss_dssp --GTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHHHHHHHHHTTH-------HHHHHHHHH
T ss_pred --cCceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhcccHH-------HHHHHHHHH
Confidence 456788999999998788886 99998556888888765444 345666666655555431 233445566
Q ss_pred HHHHHHHHHHhCC-Cccc------------------CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCC
Q 019899 238 LYDSFVAGLKQLG-IRCS------------------ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSA 298 (334)
Q Consensus 238 ~~~~~~~~l~~~g-~~~~------------------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~ 298 (334)
+.+.+.+.|++++ +... ...++ ++.+.++.. ..++... ++++||.+.+.+
T Consensus 258 ~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~--------~~~~~~~-l~~~gi~~~~~~- 326 (386)
T 1cs1_A 258 NAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGA-MLSFELDGD--------EQTLRRF-LGGLSLFTLAES- 326 (386)
T ss_dssp HHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCS-EEEEEESSC--------HHHHHHH-HHTCSSSEEBSC-
T ss_pred HHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCce-EEEEEECCC--------HHHHHHH-HHhCCcceEccc-
Confidence 6677777776642 1110 11244 444566531 2344444 677899886421
Q ss_pred cC----------------C---------CCCCeEEEEecCCCcccHHHHHHHHHHHHHH
Q 019899 299 CH----------------C---------IEPGWFRCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 299 ~~----------------~---------~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
+| . ..++++|++++. ++.++.++++.+++++
T Consensus 327 ~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~---~~~~~~i~~l~~al~~ 382 (386)
T 1cs1_A 327 LGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGI---EDGEDLIADLENGFRA 382 (386)
T ss_dssp CCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHHH
T ss_pred CCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEcc---CCHHHHHHHHHHHHHH
Confidence 11 0 125799999994 4555555555555543
No 159
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.96 E-value=4.2e-28 Score=221.19 Aligned_cols=289 Identities=13% Similarity=0.079 Sum_probs=186.7
Q ss_pred CCCcEEEecCcHHHHHHHHHHhcC--CCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCc------------cccH
Q 019899 16 DPSQIVLTAGATPAVEILCFCLAD--HGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNF------------AFSI 81 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~------------~~~~ 81 (334)
+++++++++|+++++..++..+.. ++++|++.+|+|.++........|..+..+..+...+. ..|+
T Consensus 110 ~~~~v~~~~sGsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 189 (434)
T 3l44_A 110 ALDKVRFVNSGTEAVMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNV 189 (434)
T ss_dssp TCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCH
T ss_pred CCCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcccH
Confidence 578999999999999999987754 77899999999988665544133332222211111110 0188
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEEEEeccccccccCCCCc-chhhhhhhcc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHVISDEIYGGSIFGNEEF-VSMAEILEAE 159 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~-~~~~~~~~~~ 159 (334)
++|++++++.. .++++|+++.++|++|.+. +.+.+++|.++|++||++||+||+|.+| ..+... .......
T Consensus 190 ~~le~~l~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~~~~~~~~~~--- 262 (434)
T 3l44_A 190 ETLKEALDKWG---HEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYGGAQDLLGVT--- 262 (434)
T ss_dssp HHHHHHHHHHG---GGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSSCHHHHHTCC---
T ss_pred HHHHHHHHhCC---CCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccccHHHHHcCCC---
Confidence 99999997531 1455455544466777766 7888999999999999999999999987 444322 1121111
Q ss_pred ccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHH-----hhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHH
Q 019899 160 EVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKK-----LTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRR 234 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 234 (334)
++ +.|+||.++ +|+|+||+++ ++++++.+.. ....++.+++.+.++.++++..+. +...++
T Consensus 263 ---~d----i~t~sK~~~-~G~~iG~~~~-~~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~-----~~~~~~ 328 (434)
T 3l44_A 263 ---PD----LTALGKVIG-GGLPIGAYGG-KKEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQ-----EGLYEK 328 (434)
T ss_dssp ---CS----EEEEEGGGG-TTSSCEEEEE-CHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS-----TTHHHH
T ss_pred ---CC----eeehhhhhc-CCcCeeeEEE-cHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHc-----ccHHHH
Confidence 11 457999998 8999999988 8888887765 234567888888887777653211 122333
Q ss_pred HHHHHHHHHHHHHh----CCCcccCCCceeEEeeecCCcCCC-------CChhhHHHHHHHHHHhcCeEEcCCCCcCCCC
Q 019899 235 IKKLYDSFVAGLKQ----LGIRCSESSAGLYCWADMSGLIPS-------YSEKGELELWDKLLNIAKINVTPGSACHCIE 303 (334)
Q Consensus 235 ~~~~~~~~~~~l~~----~g~~~~~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~ 303 (334)
++++.+++.+.|++ .++....+..|.++++.+...... .......++...|++ +||.+.|+.
T Consensus 329 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~------ 401 (434)
T 3l44_A 329 LDELGATLEKGILEQAAKHNIDITLNRLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQ-EGVNLAPSK------ 401 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCEEEEEETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHHH-TTEECCSST------
T ss_pred HHHHHHHHHHHHHHHHHhCCCCEEEEeeccEEEEEEecCcccchhhccccCHHHHHHHHHHHHH-CCeEEeecC------
Confidence 44444444444443 344322233455666666432110 011233567777555 799999865
Q ss_pred CCeEEEEecCCCcccHHHHHHHHHHHHHHc
Q 019899 304 PGWFRCCFTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 304 ~~~iRi~~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
.+++|+++. .+++++++++++|++++++.
T Consensus 402 ~~~~rl~~~-~t~e~i~~~l~~l~~~l~~~ 430 (434)
T 3l44_A 402 YEAWFLTTE-HTKEDIEYTIEAVGRAFAAL 430 (434)
T ss_dssp TCCEECCTT-CCHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEecc-cCHHHHHHHHHHHHHHHHHH
Confidence 246888755 79999999999999998753
No 160
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.96 E-value=1.8e-28 Score=223.91 Aligned_cols=299 Identities=15% Similarity=0.104 Sum_probs=193.0
Q ss_pred hcCCCCCCC-CcEEEecCcHHHHHHHHHHh--cCCCCeEEecCCCCCChhhhhhhccCcEE--------------EEEeC
Q 019899 9 LGQAVSFDP-SQIVLTAGATPAVEILCFCL--ADHGNALLVPSPYYPGFDRDIRFRTGVEL--------------IPVHC 71 (334)
Q Consensus 9 ~~~~~~~~~-~~i~~~~g~~~~~~~~~~~l--~~~gd~vl~~~p~~~~~~~~~~~~~g~~v--------------~~v~~ 71 (334)
+++.++... +++++++|+++++..++..+ ..++++|++.+|.|++.........+... ..++.
T Consensus 95 la~~~~~~~~~~v~~~~ggsea~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (439)
T 3dxv_A 95 LLASFPGEGTHKIWFGHSGSDANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPY 174 (439)
T ss_dssp HHHTTTCTTTEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSS
T ss_pred HHHhCCCCCCCEEEEeCCHHHHHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCC
Confidence 333344455 79999999999999999885 33667888888888765554431333322 23333
Q ss_pred CCCCCccc-----cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHH-HHHHHHHHHHhcCcEEEEeccccccccC
Q 019899 72 RSTDNFAF-----SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRE-TLYELLDFAREKNIHVISDEIYGGSIFG 145 (334)
Q Consensus 72 ~~~~~~~~-----~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~-~l~~i~~~~~~~~~~vi~D~~~~~~~~~ 145 (334)
+ +.+.. |+++|++++++ ....++++|+++.++|++|.+.+.+ .+++|.++|++||+++|+||+|+++...
T Consensus 175 ~--~~~~~~~~~~d~~~le~~l~~--~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~ 250 (439)
T 3dxv_A 175 R--PYRNDPTGDAILTLLTEKLAA--VPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARS 250 (439)
T ss_dssp S--CBTTBTTSHHHHHHHHHHHHT--SCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTT
T ss_pred C--cccccccHHHHHHHHHHHHHh--cCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC
Confidence 1 21122 78999999851 1113677777777788888877555 4999999999999999999999876554
Q ss_pred CCCcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh--hcccCCChHHHHHHHHhhCChHH
Q 019899 146 NEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL--TRFCSISAPTQRLLISMLSDTKF 223 (334)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~ 223 (334)
+... .. .... . ... +.|+||+++ +|+|+||+++ ++++++.+... ...+ .+++.+.++.++++..+.
T Consensus 251 g~~~-~~-~~~~---~-~~d---i~s~sK~~~-~G~riG~~~~-~~~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~ 318 (439)
T 3dxv_A 251 GRLH-CF-EHEG---F-VPD---ILVLGKGLG-GGLPLSAVIA-PAEILDCASAFAMQTLH-GNPISAAAGLAVLETIDR 318 (439)
T ss_dssp SSSS-GG-GGTT---C-CCS---EEEECGGGG-TTSCCEEEEE-EHHHHTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHH
T ss_pred chhh-HH-HhcC---C-CCC---EEEEcchhc-CCcceEEEEE-CHHHHhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHh
Confidence 4321 11 1111 1 122 238999999 6999999998 88888777643 3446 788888887777653221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh----CCCcccCCCceeEEeeecCCcCCC--CChhhHHHHHHHHHHhcCeEEcCCC
Q 019899 224 IQEYLETNKRRIKKLYDSFVAGLKQ----LGIRCSESSAGLYCWADMSGLIPS--YSEKGELELWDKLLNIAKINVTPGS 297 (334)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~l~~----~g~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~gi~v~~g~ 297 (334)
....++++++.+++.+.|++ .+.....+..|.++|+++...... ....+..++...|++ +||.+.|+.
T Consensus 319 -----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~ 392 (439)
T 3dxv_A 319 -----DDLPAMAERKGRLLRDGLSELAKRHPLIGDIRGRGLACGMELVCDRQSREPARAETAKLIYRAYQ-LGLVVYYVG 392 (439)
T ss_dssp -----TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEEEETTTTEECHHHHHHHHHHHHH-HTEECEEES
T ss_pred -----cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEEecCccccCCCHHHHHHHHHHHHH-CCcEEeecC
Confidence 22334455555555555544 332222223455666766321110 112345677888665 699999875
Q ss_pred CcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 298 ACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 298 ~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
.+ ++++|++++. .+++++++++++|++++++.
T Consensus 393 ~~----~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 425 (439)
T 3dxv_A 393 MN----GNVLEFTPPLTITETDIHKALDLLDRAFSEL 425 (439)
T ss_dssp TT----SCEEEECCCTTCCHHHHHHHHHHHHHHHHTG
T ss_pred CC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 32 4789998774 59999999999999998764
No 161
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.96 E-value=1.8e-27 Score=213.09 Aligned_cols=287 Identities=12% Similarity=0.097 Sum_probs=205.8
Q ss_pred CCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChh--hhhhhccC--cEEEEEeCCCCC------C-ccccH
Q 019899 13 VSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFD--RDIRFRTG--VELIPVHCRSTD------N-FAFSI 81 (334)
Q Consensus 13 ~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~--~~~~~~~g--~~v~~v~~~~~~------~-~~~~~ 81 (334)
++.+ +.+++++|+|+++++++..+ ++||+|+++++.|+++. ..++ ..| .+++.++.+..+ . ..+|+
T Consensus 48 ~~~~-~~v~~~~sgt~a~~~~~~~~-~~gd~vi~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~g~~~~~~~~~~~d~ 124 (379)
T 3ke3_A 48 YNAE-AAVIIPGSGTYGMEAVARQL-TIDEDCLIIRNGWFSYRWTQILE-KGKFAKSSTVLTAERTEDTEAPKPFAPVDI 124 (379)
T ss_dssp HTCS-EEEEEESCHHHHHHHHHHHH-CTTCEEEEEECSHHHHHHHHHHH-HHCCSSEEEEEECEESSCCSSCCCEECCCH
T ss_pred hCCC-CEEEEcCChhHHHHHHHHhC-CCCCeEEEEeCCchhHHHHHHHH-HhCCCCceEEEeccccccccccCCCCCCCH
Confidence 3344 68999999999999988654 69999999999887653 2233 344 478888763211 1 25899
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
+++++++++. ++++|++++++||+|.+.|.+++++|.++|+++|+++|+|++++ . + ....+..
T Consensus 125 ~~l~~~i~~~-----~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g---~-~~~~~~~------- 187 (379)
T 3ke3_A 125 ETAVAKIKED-----KSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-G---C-VWLDMKE------- 187 (379)
T ss_dssp HHHHHHHHHH-----TCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-T---T-CCCCHHH-------
T ss_pred HHHHHHHhhc-----CCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-C---C-ccccccc-------
Confidence 9999999753 78899999999999999999999999999999999999999975 2 1 1222221
Q ss_pred CCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh----------------------c--ccCCChHHHHHHHHh
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT----------------------R--FCSISAPTQRLLISM 217 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~----------------------~--~~~~~~~~~~~~~~~ 217 (334)
.+.++++.|++|+++ .+.++|++++ ++++.+.+.... . .++.+...+.++..+
T Consensus 188 -~~~d~~~~s~~K~l~-~~~g~g~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aa 264 (379)
T 3ke3_A 188 -LGIDVLISAPQKGWS-STPCAGLVML-SAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDA 264 (379)
T ss_dssp -HTCSEEEECTTTTTC-SCCCEEEEEE-CHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHH
T ss_pred -cCCCEEEecchhhcC-CCCceEEEEE-CHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHH
Confidence 355678899999996 3345899998 888877775411 0 124566666666666
Q ss_pred hCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC---ceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEc
Q 019899 218 LSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESS---AGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVT 294 (334)
Q Consensus 218 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~ 294 (334)
++..+ +..+++..++++++++++.+.|+++|+++..+. .+....+..+.. ....... ++++||.+.
T Consensus 265 l~~~~--~~g~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~~~~~~--------~~~~~~~-L~~~Gi~v~ 333 (379)
T 3ke3_A 265 ILEAK--EIGFDILRDAQWELGNRVRKVLTDKGIESVAAEGFEAPGVVVSYTERD--------DMHKGSA-FAEAGLQIA 333 (379)
T ss_dssp HHHHH--HHCHHHHHHHHHHHHHHHHHHHHHTTCCBSBCTTCBCSSEEEEECSCH--------HHHSSHH-HHHTTCCCE
T ss_pred HHHHH--HhcHHHHHHHHHHHHHHHHHHHHHcCCEecCCccccCceEEEEccCCc--------chHHHHH-HHHCCeEEe
Confidence 54321 222567788889999999999999998876543 232333333221 1122444 566899999
Q ss_pred CCCCcCC---CCCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 295 PGSACHC---IEPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 295 ~g~~~~~---~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
+|..+.. ...+.+|++++. .+++|+++++++|++++++.
T Consensus 334 ~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~ 376 (379)
T 3ke3_A 334 AGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDEV 376 (379)
T ss_dssp ECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHH
T ss_pred CCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHh
Confidence 9886542 235789999875 59999999999999998764
No 162
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.96 E-value=5.1e-27 Score=211.54 Aligned_cols=182 Identities=16% Similarity=0.204 Sum_probs=140.8
Q ss_pred hhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhh----hhhccCcEEEEEeCCCCCCccccH
Q 019899 6 SQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRD----IRFRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 6 ~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
++.+++.++.+ +.+++++ +++++..++. ++++||+|+++.|+|++.... ++ ..|.+++.++.. |+
T Consensus 73 ~~~la~~~g~~-~~i~~~s-G~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~-~~G~~v~~v~~~-------d~ 141 (403)
T 3cog_A 73 EKAVAALDGAK-YCLAFAS-GLAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVAS-EFGLKISFVDCS-------KI 141 (403)
T ss_dssp HHHHHHHHTCS-EEEEESC-HHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGG-GGTCEEEEECTT-------SH
T ss_pred HHHHHHHhCCC-cEEEECC-HHHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHH-HcCCEEEEECCC-------CH
Confidence 33444334333 4555555 5689999998 889999999999999985553 34 679999999862 78
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcC-cEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKN-IHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~-~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
+++++++++ ++++|++++|+||||.+++ +++|.++|+++| +++|+|++|..+.+. .++
T Consensus 142 ~~l~~~i~~------~t~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~~livD~~~~~~~~~----~~~-------- 200 (403)
T 3cog_A 142 KLLEAAITP------ETKLVWIETPTNPTQKVID---IEGCAHIVHKHGDIILVVDNTFMSPYFQ----RPL-------- 200 (403)
T ss_dssp HHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHTSSSCCEEEEECTTTCTTTC----CTT--------
T ss_pred HHHHHhcCc------CCeEEEEECCCCCCCeeeC---HHHHHHHHHHcCCCEEEEECCCcccccC----Ccc--------
Confidence 999998875 7999999999999999999 999999999999 999999999875532 111
Q ss_pred cCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHHhhccc--CCChHHHHHHHHhhCC
Q 019899 161 VDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKKLTRFC--SISAPTQRLLISMLSD 220 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~ 220 (334)
+.+.++++.|+||.++.+| +++||++++++++.+.++.....+ ..++..+.++...++.
T Consensus 201 -~~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~~~~~~~~l~~ 262 (403)
T 3cog_A 201 -ALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLGAVPSPIDCYLCNRGLKT 262 (403)
T ss_dssp -TTTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT
T ss_pred -ccCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH
Confidence 1456789999999998665 579999986788888887655443 3577777777766665
No 163
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.96 E-value=2.7e-29 Score=223.35 Aligned_cols=278 Identities=13% Similarity=0.094 Sum_probs=198.4
Q ss_pred hhhhhhhcCCCCCC-CCcEEEecCc-HHHHHHHHHHhcCC---CCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCc
Q 019899 3 GFMSQVLGQAVSFD-PSQIVLTAGA-TPAVEILCFCLADH---GNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNF 77 (334)
Q Consensus 3 ~~~~~~~~~~~~~~-~~~i~~~~g~-~~~~~~~~~~l~~~---gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~ 77 (334)
+++.+.++ ++ +++|++++|+ ++++..++.++..+ ||.|+++.++|... ..++ ..| +++.++++++++
T Consensus 55 ~~la~~~g----~~~~~~v~~~~g~gt~al~~~~~~l~~~~~~g~~vi~~~~~~~~~-~~~~-~~g-~~~~v~~~~~~~- 126 (360)
T 1w23_A 55 NLLRELLQ----IPNDYQILFLQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKAL-KEAK-LLG-ETHIAASTKANS- 126 (360)
T ss_dssp HHHHHHHT----CCTTEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHH-HHHH-TTS-EEEEEEECGGGT-
T ss_pred HHHHHHhC----CCCCceEEEECCcchHHHHHHHHHhcCCCCcccEEEecchhHHHH-HHHH-HhC-CeEEeecccccC-
Confidence 34444444 43 5699999999 99999999998764 66788877777653 3355 679 999999853233
Q ss_pred cccHHHHHH-HHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhh
Q 019899 78 AFSITALDQ-AFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEIL 156 (334)
Q Consensus 78 ~~~~~~l~~-~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~ 156 (334)
.+|++++++ ++++ ++++|++++|+||||.+++ ++. +++|++||+|++|+.+.. ..++.
T Consensus 127 ~~d~~~l~~~~i~~------~~k~v~~~~~~nptG~~~~--~i~------~~~~~~li~D~a~~~~~~----~~~~~--- 185 (360)
T 1w23_A 127 YQSIPDFSEFQLNE------NDAYLHITSNNTIYGTQYQ--NFP------EINHAPLIADMSSDILSR----PLKVN--- 185 (360)
T ss_dssp SCSCCCGGGCCCCT------TEEEEEEESEETTTTEECS--SCC------CCCSSCEEEECTTTTTSS----CCCGG---
T ss_pred cCCccchHhhccCC------CCCEEEEeCCCCCcceecc--ccc------ccCCceEEEechhhcCCC----CcCcc---
Confidence 478899988 7754 7999999999999999987 332 379999999999986432 11221
Q ss_pred hccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh-------------c-ccCCChHHHHHHHHhhCChH
Q 019899 157 EAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT-------------R-FCSISAPTQRLLISMLSDTK 222 (334)
Q Consensus 157 ~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~-------------~-~~~~~~~~~~~~~~~l~~~~ 222 (334)
. . ++++.|+||.+|++| +||+++ ++++++.+.... . ..+.+...+.++..+++...
T Consensus 186 ~-----~--di~~~s~sK~~~~~G--~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~ 255 (360)
T 1w23_A 186 Q-----F--GMIYAGAQKNLGPSG--VTVVIV-KKDLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIK 255 (360)
T ss_dssp G-----C--SEEEEETTTTTSCTT--CEEEEE-EHHHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHH
T ss_pred c-----C--CEEEEEcccccCCCC--cEEEEE-cHHHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHH
Confidence 1 2 378899999998666 899998 666665553321 1 12345555555555553211
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHhCC-C-ccc-CC--CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCC
Q 019899 223 FIQE-YLETNKRRIKKLYDSFVAGLKQLG-I-RCS-ES--SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPG 296 (334)
Q Consensus 223 ~~~~-~~~~~~~~~~~~~~~~~~~l~~~g-~-~~~-~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g 296 (334)
+. .+.+++++++++++++.+.|++++ + ... .+ .+++++|++++.. .+..++.+. ++++||.+.||
T Consensus 256 --~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~-l~~~gi~~~~~ 326 (360)
T 1w23_A 256 --DLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRNE------ELNQQFLAK-AKEQGFVGLNG 326 (360)
T ss_dssp --HTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEECSSH------HHHHHHHHH-HHHTTEESCBC
T ss_pred --HhcCHHHHHHHHHHHHHHHHHHHHHccCcccccCCchhccCcEEEEEcCCC------ccHHHHHHH-HHHCCeeeecC
Confidence 12 457788889999999999998875 4 432 12 2466888888642 234567777 55689999888
Q ss_pred CCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 297 SACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 297 ~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
..+ ++++|++++. .+++++++++++|++++++
T Consensus 327 ~~~----~~~iRis~~~~~~~~~i~~~~~~l~~~~~~ 359 (360)
T 1w23_A 327 HRS----VGGCRASIYNAVPIDACIALRELMIQFKEN 359 (360)
T ss_dssp CTT----TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCC----CCeEEEEecCCCCHHHHHHHHHHHHHHHhh
Confidence 753 5789999985 5899999999999998865
No 164
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.96 E-value=1.5e-28 Score=218.52 Aligned_cols=277 Identities=13% Similarity=0.075 Sum_probs=189.9
Q ss_pred EEEecCcHHHHHHHHHHhcCCCCe--EEecCCCCCChhhh--h-hhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 20 IVLTAGATPAVEILCFCLADHGNA--LLVPSPYYPGFDRD--I-RFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 20 i~~~~g~~~~~~~~~~~l~~~gd~--vl~~~p~~~~~~~~--~-~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
.++++|+++++..++.++..+||+ |+++.+.|...... . . ..|.+++.++. +++.+|+++++++ .
T Consensus 66 ~i~~~~g~~a~~~a~~~~~~~g~~~vvi~~~~~~~~~~~~~~~~~-~~g~~~~~v~~---~~~~~d~~~l~~~-~----- 135 (359)
T 3pj0_A 66 AVFFPSGTMAQQIALRIWADRKENRRVAYHPLSHLEIHEQDGLKE-LQQITPLLLGT---ANQLLTIDDIKSL-R----- 135 (359)
T ss_dssp EEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHH-HHCCEEEECSC---TTSCCCHHHHHTC-S-----
T ss_pred EEEeCCHHHHHHHHHHHHHhcCCCcEEEEeccceeeehhcchHHH-hcCceEEecCC---cCCCcCHHHHHhc-c-----
Confidence 356688889999999999888886 55555555443322 2 3 56899998885 4468999999987 3
Q ss_pred CCceeEEEEeCCCCCc-ccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEeccc
Q 019899 95 GVKVRGILICNPANPV-GNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLS 173 (334)
Q Consensus 95 ~~~~~~i~~~~p~npt-G~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s 173 (334)
.++++|++++|+||+ |.+++.+++++|.++|++||++||+|++|..+.... ...+...+. .+.++++.|+|
T Consensus 136 -~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~-~~~~~~~~~------~~~d~~~~s~s 207 (359)
T 3pj0_A 136 -EPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPF-YQKSAEEIC------ALFDSVYVSFY 207 (359)
T ss_dssp -SCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHH-HTCCHHHHH------TTCSEEEEESS
T ss_pred -CCceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhh-hCCCHHHhh------ccCCEEEEecc
Confidence 379999999999987 799999999999999999999999999986533110 001222222 22334566999
Q ss_pred ccCCCCCceEEEEeecCHHHHHHHHHhhcccC--C--ChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 019899 174 KDLSLPGFRTGVIYSYNESVLAAAKKLTRFCS--I--SAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL 249 (334)
Q Consensus 174 K~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 249 (334)
|+++.+ .+ |+++. ++++++.++.....++ . ......+....+ ++.. +..+++.++++++.+.|+++
T Consensus 208 K~~~~~-~g-g~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~~~l------~~~~-~~~~~~~~~~~~l~~~L~~~ 277 (359)
T 3pj0_A 208 KGIGGI-AG-AILAG-NDDFVQEAKIWKRRYGGDLISLYPYILSADYYF------EKRI-GKMAEYFEAAKGLAERFNSC 277 (359)
T ss_dssp STTCCS-SC-EEEEE-CHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHH------HHHG-GGHHHHHHHHHHHHHHHHTS
T ss_pred ccCCCc-ce-EEEEC-CHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHH------HHHH-HHhHHHHHHHHHHHHHHhhC
Confidence 998744 33 77777 8999988876443221 2 222222222222 2222 23345677888999999987
Q ss_pred -CCccc-CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC----CCcccHHHHH
Q 019899 250 -GIRCS-ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS----LTHEDIPLVI 323 (334)
Q Consensus 250 -g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~----~~~~~l~~~l 323 (334)
|+++. .+..+.++|++++... ..+..++.+. +.++||.+.||..|+....+++|++++. .+.+++++++
T Consensus 278 ~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~-l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l 352 (359)
T 3pj0_A 278 SGVKTVPEVPVSNMFHVYFENSA----DEIGAILTKI-QDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVF 352 (359)
T ss_dssp TTEEEESSSCSSSEEEEEESSCH----HHHHHHHHHH-HHHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHH
T ss_pred CCceeeccCCcceEEEEEecCcc----chhHHHHHHH-HHhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHH
Confidence 88874 5666777888876431 1133456666 5668999999988775455789998862 4678888888
Q ss_pred HHHHHH
Q 019899 324 ERIQKV 329 (334)
Q Consensus 324 ~~l~~~ 329 (334)
++|.+.
T Consensus 353 ~~l~~~ 358 (359)
T 3pj0_A 353 RCLEKE 358 (359)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 888765
No 165
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.96 E-value=1.3e-27 Score=217.99 Aligned_cols=275 Identities=15% Similarity=0.126 Sum_probs=198.4
Q ss_pred CCcEEEecCcHHHHHHHHHHhc---------CCC-CeEEecCCCCCChhh-hhhhccC------------cEEEEEeCCC
Q 019899 17 PSQIVLTAGATPAVEILCFCLA---------DHG-NALLVPSPYYPGFDR-DIRFRTG------------VELIPVHCRS 73 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~---------~~g-d~vl~~~p~~~~~~~-~~~~~~g------------~~v~~v~~~~ 73 (334)
.+++++++|+++|+..++..+. .+| |+|++.+|+|++... .+. ..| .+++.+|.
T Consensus 133 ~~~v~~~~sGseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~-~~g~~~~~~~~~p~~~~v~~~~~-- 209 (439)
T 2oat_A 133 YHKVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAIS-SSTDPTSYDGFGPFMPGFDIIPY-- 209 (439)
T ss_dssp CSEEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHT-TCCCHHHHTTSCSCCTTEEEECS--
T ss_pred CCEEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhh-cCCChhcccCCCCCCCCeEEeCC--
Confidence 5799999999999999998864 356 899999999987644 344 444 45666663
Q ss_pred CCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCccc-CCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcc-h
Q 019899 74 TDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGN-IIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFV-S 151 (334)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~-~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~-~ 151 (334)
.|++++++++++ .++++|++...++++|. ..+.+++++|.++|++||+++|+||+|.++.+.+..+. .
T Consensus 210 -----~d~~~le~~l~~-----~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~~~~ 279 (439)
T 2oat_A 210 -----NDLPALERALQD-----PNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVD 279 (439)
T ss_dssp -----SCHHHHHHHTTS-----TTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGG
T ss_pred -----CCHHHHHHHhCC-----CCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcchhHH
Confidence 278999998852 26775555443678997 46888999999999999999999999987655443221 1
Q ss_pred hhhhhhccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHH--hhcccCCChHHHHHHHHhhCChHHHHHHH
Q 019899 152 MAEILEAEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKK--LTRFCSISAPTQRLLISMLSDTKFIQEYL 228 (334)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 228 (334)
.... ..+ + .|+||.++ +| +|+||+++ ++++.+.+.. ....++.|++.+.++.+.++..+ +
T Consensus 280 ~~~~-------~~D-i--~t~sK~l~-~G~~~~G~v~~-~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~---~-- 342 (439)
T 2oat_A 280 YENV-------RPD-I--VLLGKALS-GGLYPVSAVLC-DDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLE---E-- 342 (439)
T ss_dssp GGTC-------CCS-E--EEECGGGG-TTSSCCEEEEE-CHHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHH---H--
T ss_pred HhCC-------CCc-E--EEeccccc-CCCCCeEEEEE-CHHHHhccCCCCcccCCCcCHHHHHHHHHHHHHHh---h--
Confidence 1111 112 2 28999998 68 89999999 7788777654 23456778888887777765322 1
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCccc--CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCe
Q 019899 229 ETNKRRIKKLYDSFVAGLKQLGIRCS--ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGW 306 (334)
Q Consensus 229 ~~~~~~~~~~~~~~~~~l~~~g~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~ 306 (334)
....++++++.+++.+.|++++++.. .+..|.++|++++.... .+..++...|++ +||.+.|+. +++
T Consensus 343 ~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~g~~~~v~l~~~~~----~~~~~l~~~l~~-~Gv~v~~~~------~~~ 411 (439)
T 2oat_A 343 ENLAENADKLGIILRNELMKLPSDVVTAVRGKGLLNAIVIKETKD----WDAWKVCLRLRD-NGLLAKPTH------GDI 411 (439)
T ss_dssp TTHHHHHHHHHHHHHHHHTTSCTTTEEEEEEETTEEEEEECCCSS----CCHHHHHHHHHH-TTEECCBSS------SSE
T ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeeeEEEEEEecCcc----HHHHHHHHHHHH-CCeEEecCC------CCE
Confidence 24567788888999999988765432 22345677888875310 134578888665 799998842 578
Q ss_pred EEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 307 FRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 307 iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
+|++++. .+++++++++++|++++++
T Consensus 412 iRi~~~~~~t~e~i~~~l~~l~~~l~~ 438 (439)
T 2oat_A 412 IRFAPPLVIKEDELRESIEIINKTILS 438 (439)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEEECccCCCHHHHHHHHHHHHHHHHh
Confidence 9998874 6999999999999999875
No 166
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.96 E-value=1.7e-28 Score=217.97 Aligned_cols=276 Identities=11% Similarity=0.026 Sum_probs=190.6
Q ss_pred CcEEEecCcHHHHHHHHHHhcCCCC--eEEecCCCCCChhh---hhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHH
Q 019899 18 SQIVLTAGATPAVEILCFCLADHGN--ALLVPSPYYPGFDR---DIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQAR 92 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l~~~gd--~vl~~~p~~~~~~~---~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~ 92 (334)
+..++++++++++..++.++.++|| .|+++.+.|..... ... ..|.+++.++. +++.+|+++++++ .
T Consensus 63 ~~~i~~~~G~~a~~~al~~~~~~gd~~~vi~~~~~~~~~~~~~~~~~-~~g~~~~~v~~---~~~~~d~~~l~~~--~-- 134 (357)
T 3lws_A 63 DDAVFFPSGTMAQQVALRIWSDETDNRTVAYHPLCHLEIHEQDGLKE-LHPIETILVGA---ADRLMTLDEIKAL--P-- 134 (357)
T ss_dssp SEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHH-HSSCEEEECSC---TTSCCCHHHHHTC--C--
T ss_pred CcEEEecCcHHHHHHHHHHHhhcCCCcEEEecccceeeeeccchhhh-ccCcEEEEecC---CCCCcCHHHHhcC--c--
Confidence 3445668888899999999988888 67777776655444 233 56888888874 4457999999876 1
Q ss_pred HcCCceeEEEEeCCCCCc-ccCCCHHHHHHHHHHHHhcCcEEEEecccccc--ccCCCCcchhhhhhhccccCCCcEEEE
Q 019899 93 KRGVKVRGILICNPANPV-GNIIPRETLYELLDFAREKNIHVISDEIYGGS--IFGNEEFVSMAEILEAEEVDKDRVHII 169 (334)
Q Consensus 93 ~~~~~~~~i~~~~p~npt-G~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (334)
+++++++++|+||| |.+++.+++++|+++|++||++||+|++|... .+.+. +...+.. ...+++
T Consensus 135 ----~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~---~~~~~~~------~~d~~~ 201 (357)
T 3lws_A 135 ----DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEK---TAAEIAG------LFDSIY 201 (357)
T ss_dssp ----SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTC---CHHHHHT------TSSEEE
T ss_pred ----CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCC---ChHHHHh------cCCEEE
Confidence 47899999999998 99999999999999999999999999998621 11122 2222221 122347
Q ss_pred ecccccCCCCCceEEEEeecCHHHHHHHHHhhcccC--C--ChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHH
Q 019899 170 YGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCS--I--SAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAG 245 (334)
Q Consensus 170 ~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (334)
.|+||+++.++. ||+++ ++++++.+......++ . +...+.++...+ +++.+++ +++.++++++.+.
T Consensus 202 ~s~sK~~~~~~g--g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~~~~~~-~~~~~~~~~l~~~ 271 (357)
T 3lws_A 202 ISFYKGLGGIAG--AILAG-PAAFCQTARIWKRRYGGDLISLYPYIVSADYYY------ELRKDRM-GQYYEQAKQLAEQ 271 (357)
T ss_dssp EESSSTTCCSSC--EEEEE-CHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHH------HHHTTCH-HHHHHHHHHHHHH
T ss_pred EeccccCCCCce--EEEEc-CHHHHHHHHHHHHHhcCCcccchHHHHHHHHHH------HHHHHHH-HHHHHHHHHHHHH
Confidence 899999942332 99988 8899888876543322 1 222222222222 2222222 3356778889999
Q ss_pred HHhC-CCcc-cCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC----CCcccH
Q 019899 246 LKQL-GIRC-SESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS----LTHEDI 319 (334)
Q Consensus 246 l~~~-g~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~----~~~~~l 319 (334)
|+++ |+++ ..+..++++|++++... ..+..++... +.++||.+.||..++ ....++|++++. .+++++
T Consensus 272 L~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-l~~~Gi~v~~g~~~~-~~~~~~r~~i~~~~~~~~~~~l 345 (357)
T 3lws_A 272 FNALPGVHTTPEVPVSNMFHLHFDGQA----ADISPKLEQV-QEETGLGFVGYLVDK-DGYCSTEISVGDAYGELDQQTR 345 (357)
T ss_dssp HHTSTTEEEESSSCSSSEEEEEEESCH----HHHHHHHHHH-HHHHCEESCSCCEEC-SSEEEEEEEBCTTGGGSCHHHH
T ss_pred HHhCCCCeeccCCCcceEEEEEecCCh----HHHHHHHHHH-HHhcCeEEecccccC-CCceEEEEEecchhhhcCHHHH
Confidence 9987 8887 45677888999987531 0123466666 566899999997665 234589999862 367888
Q ss_pred HHHHHHHHHHH
Q 019899 320 PLVIERIQKVA 330 (334)
Q Consensus 320 ~~~l~~l~~~~ 330 (334)
++++++|.+++
T Consensus 346 ~~al~~l~~al 356 (357)
T 3lws_A 346 DAGFARLRQAF 356 (357)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhc
Confidence 99999888764
No 167
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.96 E-value=7.7e-28 Score=220.86 Aligned_cols=303 Identities=10% Similarity=0.074 Sum_probs=195.4
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcC--------CCCeEEecCCCCCChhhhhhhccC----------
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLAD--------HGNALLVPSPYYPGFDRDIRFRTG---------- 63 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~--------~gd~vl~~~p~~~~~~~~~~~~~g---------- 63 (334)
++++.+. ++.+.++|++++|+++++..++..+.+ ++++|++.+|+|+++........+
T Consensus 100 a~~l~~~----~~~~~~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 175 (459)
T 4a6r_A 100 SSLLAEV----TPAGFDRVFYTNSGSESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDL 175 (459)
T ss_dssp HHHHHHH----SCTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CC
T ss_pred HHHHHHh----CCCCCCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCC
Confidence 3445443 445678999999999999999998865 578999999999976644331111
Q ss_pred --cEEEEEeCCC--C-CCcccc--------HHHHHHHHHHHHHcCCceeEEEEeCC-CCCccc-CCCHHHHHHHHHHHHh
Q 019899 64 --VELIPVHCRS--T-DNFAFS--------ITALDQAFNQARKRGVKVRGILICNP-ANPVGN-IIPRETLYELLDFARE 128 (334)
Q Consensus 64 --~~v~~v~~~~--~-~~~~~~--------~~~l~~~l~~~~~~~~~~~~i~~~~p-~nptG~-~~~~~~l~~i~~~~~~ 128 (334)
..+..++.+. . +.+ .| +++|++++++.. ..+++ +++++| ++++|. ..+.+++++|.++|++
T Consensus 176 ~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~~~--~~~~~-~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~ 251 (459)
T 4a6r_A 176 PIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILEIG--ADKVA-AFVGEPIQGAGGVIVPPATYWPEIERICRK 251 (459)
T ss_dssp SCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHC--GGGEE-EEEECSSBTTTTCBCCCTTHHHHHHHHHHH
T ss_pred CCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHHcC--CCCEE-EEEECCccCCCCcccCCHHHHHHHHHHHHH
Confidence 1334444321 0 111 33 788888887421 01455 555555 566666 4488899999999999
Q ss_pred cCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHH-----Hhhcc
Q 019899 129 KNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAK-----KLTRF 203 (334)
Q Consensus 129 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~-----~~~~~ 203 (334)
||+++|+||+|.++.+.|..+ ..... + . ... +.++||+++..|+|+|++++ ++++.+.+. .....
T Consensus 252 ~~~llI~DEv~~g~gr~G~~~-~~~~~-~---~-~pd---i~t~sK~l~gg~~~lg~v~~-~~~i~~~~~~~~~~~~~~t 321 (459)
T 4a6r_A 252 YDVLLVADEVICGFGRTGEWF-GHQHF-G---F-QPD---LFTAAKGLSSGYLPIGAVFV-GKRVAEGLIAGGDFNHGFT 321 (459)
T ss_dssp TTCEEEEECTTTTTTTTSSSS-HHHHH-T---C-CCS---EEEECGGGGTTSSCCEEEEE-CHHHHHHHHHHCTTHHHHH
T ss_pred cCCEEEEeccccCCCcccccc-hHhhc-C---C-CCC---eeehhhhhcCCCCCccceee-CHHHHHHhhcCCCcccCCC
Confidence 999999999999876655422 11111 1 1 122 33689999744489999998 899999887 23456
Q ss_pred cCCChHHHHHHHHhhCChHHHHHHHHHHH-HHHHHHHHHHHHHHHhCC-CcccCCCceeEEeeecCCcCCCC-----Chh
Q 019899 204 CSISAPTQRLLISMLSDTKFIQEYLETNK-RRIKKLYDSFVAGLKQLG-IRCSESSAGLYCWADMSGLIPSY-----SEK 276 (334)
Q Consensus 204 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~g-~~~~~~~~g~~~~~~~~~~~~~~-----~~~ 276 (334)
++.|++++.++.++++..+. ++..++.+ +.....++.+.+.|.+++ +....+. |.++++++....... ...
T Consensus 322 ~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~ 399 (459)
T 4a6r_A 322 YSGHPVCAAVAHANVAALRD-EGIVQRVKDDIGPYMQKRWRETFSRFEHVDDVRGV-GMVQAFTLVKNKAKRELFPDFGE 399 (459)
T ss_dssp HCSCHHHHHHHHHHHHHHHH-TCHHHHHHHTHHHHHHHHHHHHHTTCTTEEEEEEE-TTEEEEEECSBTTTTBCCSSTTH
T ss_pred CCCCHHHHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEE-EEEEEEEEecCccccccccchHH
Confidence 78899999988888764321 12223333 333333333334444432 2233333 455667765432110 111
Q ss_pred hHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 277 GELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 277 ~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
...++...+++ +||.+.|+. +++|++++. .+++++++++++|++++++
T Consensus 400 ~~~~~~~~l~~-~Gv~v~~~g-------~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 448 (459)
T 4a6r_A 400 IGTLCRDIFFR-NNLIMRACG-------DHIVSAPPLVMTRAEVDEMLAVAERCLEE 448 (459)
T ss_dssp HHHHHHHHHHH-TTEECEEET-------TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-CCeEEecCC-------CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 24567777555 799998852 689999764 6999999999999999875
No 168
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.96 E-value=1.2e-27 Score=217.89 Aligned_cols=276 Identities=16% Similarity=0.172 Sum_probs=188.6
Q ss_pred CCcEEEecCcHHHHHHHHHHhc---------CCC-CeEEecCCCCCChhhh-hhhccC------------cEEEEEeCCC
Q 019899 17 PSQIVLTAGATPAVEILCFCLA---------DHG-NALLVPSPYYPGFDRD-IRFRTG------------VELIPVHCRS 73 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~---------~~g-d~vl~~~p~~~~~~~~-~~~~~g------------~~v~~v~~~~ 73 (334)
.+++++++|+++|+..++..+. .+| |+|++++|+|.+.... +. ..| .+++.+|.
T Consensus 122 ~~~v~~~~sGseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~-~~g~~~~~~~~~p~~~~v~~~~~-- 198 (433)
T 1z7d_A 122 YDKVLMMNTGAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCIS-ASTTKKCTSNFGPFAPQFSKVPY-- 198 (433)
T ss_dssp CSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC---------------------------CEEEECT--
T ss_pred CCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhc-ccCCccccccCCCCCCCeEEeCC--
Confidence 5799999999999999988753 356 9999999999876443 33 333 23445543
Q ss_pred CCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccC-CCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchh
Q 019899 74 TDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNI-IPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSM 152 (334)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~ 152 (334)
.|++++++++++ .++++|++...+|++|.+ .+.+++++|.++|++||+++|+||+|.++.+.+..+. .
T Consensus 199 -----~d~~~le~~l~~-----~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~~-~ 267 (433)
T 1z7d_A 199 -----DDLEALEEELKD-----PNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLC-V 267 (433)
T ss_dssp -----TCHHHHHHHHTS-----TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSG-G
T ss_pred -----CCHHHHHHHhCC-----CCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcchh-h
Confidence 379999999852 267765555446789985 6888999999999999999999999987655443221 1
Q ss_pred hhhhhccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHH--hhcccCCChHHHHHHHHhhCChHHHHHHHH
Q 019899 153 AEILEAEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKK--LTRFCSISAPTQRLLISMLSDTKFIQEYLE 229 (334)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 229 (334)
+..+ . ... +.|+||.++ +| +|+||+++ ++++.+.+.. ....++.|++.+.++.+.++..+ + .
T Consensus 268 -~~~~---~-~~d---i~t~sK~l~-~G~~~~G~v~~-~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~---~--~ 332 (433)
T 1z7d_A 268 -HHYN---V-KPD---VILLGKALS-GGHYPISAVLA-NDDIMLVIKPGEHGSTYGGNPLAASICVEALNVLI---N--E 332 (433)
T ss_dssp -GGGT---C-CCS---EEEECGGGG-TTSSCCEEEEE-CHHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHH---H--T
T ss_pred -HhcC---C-CCC---EEEECcccc-CCCCCeEEEEE-CHHHHhhhccccccccCCCCHHHHHHHHHHHHHHH---h--c
Confidence 1111 1 112 238999998 89 99999999 7788776654 23446778888887777765322 1 2
Q ss_pred HHHHHHHHHHHHHHHHHHhC--CCccc--CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCC
Q 019899 230 TNKRRIKKLYDSFVAGLKQL--GIRCS--ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCIEPG 305 (334)
Q Consensus 230 ~~~~~~~~~~~~~~~~l~~~--g~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~ 305 (334)
...++++++.+++.+.|++. ++... .+..|.++|++++... .+..++...|++ +||.+.|+. ++
T Consensus 333 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~g~~~~i~~~~~~-----~~~~~~~~~l~~-~Gv~v~~~~------~~ 400 (433)
T 1z7d_A 333 KLCENAEKLGGPFLENLKRELKDSKIVRDVRGKGLLCAIEFKNEL-----VNVLDICLKLKE-NGLITRDVH------DK 400 (433)
T ss_dssp THHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEETTEEEEEECTTT-----CCHHHHHHHHHH-TTEECCEET------TT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeeeeEEEEEEccCh-----hHHHHHHHHHHH-CCeEEecCC------CC
Confidence 34566777778888888765 44322 1234567788887531 134578888665 799998852 57
Q ss_pred eEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 306 WFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 306 ~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
++|++++. .+++++++++++|++++++.
T Consensus 401 ~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 429 (433)
T 1z7d_A 401 TIRLTPPLCITKEQLDECTEIIVKTVKFF 429 (433)
T ss_dssp EEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCcCCCHHHHHHHHHHHHHHHHHH
Confidence 89998874 69999999999999998753
No 169
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.96 E-value=5.7e-28 Score=221.19 Aligned_cols=293 Identities=14% Similarity=0.072 Sum_probs=202.2
Q ss_pred hhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcC-------CC-CeEEecCCCCCChhhhhhhcc--------------C
Q 019899 6 SQVLGQAVSFDPSQIVLTAGATPAVEILCFCLAD-------HG-NALLVPSPYYPGFDRDIRFRT--------------G 63 (334)
Q Consensus 6 ~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~-------~g-d~vl~~~p~~~~~~~~~~~~~--------------g 63 (334)
++.+.+.++.+.++|++++|+++|+..++..+.. +| ++|++.+++|.++..... .. .
T Consensus 124 ~e~la~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~-~~~~~~~~~~~~~~~~~ 202 (457)
T 3tfu_A 124 AKLLVDITPAGLDTVFFSDSGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAM-SICDPHGGMHSLWTDVL 202 (457)
T ss_dssp HHHHHHHSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHH-TTSCCC----------C
T ss_pred HHHHHHhCCCCcCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhh-cccCCcccccccccCCC
Confidence 3334333455678999999999999999988753 44 589999999987654333 22 1
Q ss_pred cEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeC-CCCCcccCC-CHHHHHHHHHHHHhcCcEEEEeccccc
Q 019899 64 VELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICN-PANPVGNII-PRETLYELLDFAREKNIHVISDEIYGG 141 (334)
Q Consensus 64 ~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~-p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~ 141 (334)
..+..++.+.......|+++|++++++. ..++++|++.. ++||+|.+. +.+.+++|.++|++||+++|+||+|.+
T Consensus 203 ~~~~~~~~p~~~~~~~d~~~le~~l~~~---~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g 279 (457)
T 3tfu_A 203 AAQVFAPQVPRDYDPAYSAAFEAQLAQH---AGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATG 279 (457)
T ss_dssp CCCEEECCCCSSCCHHHHHHHHHHHHHH---GGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTT
T ss_pred CCceEecCCCcccCHHHHHHHHHHHHhC---CCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccC
Confidence 1233444332222335899999999853 12678777777 689999877 677799999999999999999999998
Q ss_pred cccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHH-------hhcccCCChHHHHH
Q 019899 142 SIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKK-------LTRFCSISAPTQRL 213 (334)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 213 (334)
|.+.|..+ ...... . ..+ +.|+||.++ .| +|+||+++ ++++.+.+.. ....++.|++.+.+
T Consensus 280 ~gr~G~~~-a~~~~~----~-~pd---iit~sK~l~-gG~~~lG~v~~-~~~i~~~~~~~~~~~~~~~~t~~~n~~a~aa 348 (457)
T 3tfu_A 280 FGRTGALF-AADHAG----V-SPD---IMCVGKALT-GGYLSLAATLC-TADVAHTISAGAAGALMHGPTFMANPLACAV 348 (457)
T ss_dssp TTTTSSSS-THHHHT----C-CCS---EEEECGGGG-TTSSCCEEEEE-EHHHHHHHHHSSSCSCCCCCTTTTCHHHHHH
T ss_pred Cccccchh-HhHhcC----C-Cce---EEEEChhhh-CCCcceEEEEE-cHHHHHHhhccCCCceeEecCCCcCHHHHHH
Confidence 76655432 111111 1 222 228999997 56 69999998 8899888862 22446788888888
Q ss_pred HHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----CcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhc
Q 019899 214 LISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLG----IRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIA 289 (334)
Q Consensus 214 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 289 (334)
+.+.++..+ + +...++++++.+++.+.|+++. +....+ .|.+++++++... +..++...|++ +
T Consensus 349 a~aaL~~~~---~--~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr~-~G~~~~i~l~~~~------~~~~~~~~l~~-~ 415 (457)
T 3tfu_A 349 SVASVELLL---G--QDWRTRITELAAGLTAGLDTARALPAVTDVRV-CGAIGVIECDRPV------DLAVATPAALD-R 415 (457)
T ss_dssp HHHHHHHHH---T--SCHHHHHHHHHHHHHHHHGGGGGSTTEEEEEE-CSSCEEEEESSCC------CHHHHHHHHHH-T
T ss_pred HHHHHHHHh---h--hHHHHHHHHHHHHHHHHHHHHhcCCCeeeeec-CCeEEEEEECCcc------cHHHHHHHHHH-C
Confidence 777765321 1 2344556666777777776642 222223 3556778887542 24678888665 6
Q ss_pred CeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 290 KINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 290 gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
||.+.|. .+++|++++. .+++++++++++|++++++.
T Consensus 416 Gv~v~~~-------~~~lRi~p~~~~t~eei~~~l~~L~~~l~~~ 453 (457)
T 3tfu_A 416 GVWLRPF-------RNLVYAMPPYICTPAEITQITSAMVEVARLV 453 (457)
T ss_dssp TEECCCB-------TTEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred CeEEEec-------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 9999873 2589998764 59999999999999999764
No 170
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.96 E-value=4.5e-27 Score=215.29 Aligned_cols=301 Identities=12% Similarity=0.102 Sum_probs=204.3
Q ss_pred hhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcC--------CCCeEEecCCCCCChhh-hhhhccCc----------
Q 019899 4 FMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLAD--------HGNALLVPSPYYPGFDR-DIRFRTGV---------- 64 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~--------~gd~vl~~~p~~~~~~~-~~~~~~g~---------- 64 (334)
-+++.+++.++.++++|++++|+++++..++..+.. ++|+|++.+|+|+++.. .+. ..|.
T Consensus 97 ~l~~~la~~~~~~~~~v~~~~ggsea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~-~~g~~~~~~~~~~~ 175 (449)
T 3a8u_X 97 QLAEKITDLTPGNLNHVFFTDSGSECALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTS-LGGVNGNRKLFGQP 175 (449)
T ss_dssp HHHHHHHTTSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHH-HCCCHHHHTTTCCC
T ss_pred HHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhh-ccCChhhccccCCC
Confidence 345556666667788999999999999999988753 67999999999987654 333 3331
Q ss_pred --EEEEEeCCC--CCC-cccc--------HHHHHHHHHHHHHcCCceeEEEEeCC-CCCccc-CCCHHHHHHHHHHHHhc
Q 019899 65 --ELIPVHCRS--TDN-FAFS--------ITALDQAFNQARKRGVKVRGILICNP-ANPVGN-IIPRETLYELLDFAREK 129 (334)
Q Consensus 65 --~v~~v~~~~--~~~-~~~~--------~~~l~~~l~~~~~~~~~~~~i~~~~p-~nptG~-~~~~~~l~~i~~~~~~~ 129 (334)
.+..++++. ... ..+| +++|++++++.. ..++++ ++++| +|+||. ..+.+++++|.++|++|
T Consensus 176 ~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~--~~~~~~-vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~ 252 (449)
T 3a8u_X 176 MQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHD--ASNIAA-VFVEPLAGSAGVLVPPEGYLKRNREICNQH 252 (449)
T ss_dssp SCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHC--GGGEEE-EEECSSBTTTTCBCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcC--CCCEEE-EEEcCccCCCCCccCCHHHHHHHHHHHHHh
Confidence 234444321 111 1245 899999987521 015664 45556 578997 55688999999999999
Q ss_pred CcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHHh--------
Q 019899 130 NIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKKL-------- 200 (334)
Q Consensus 130 ~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~~-------- 200 (334)
|+++|+||+|.++.+.+..+ .+... . . ..+ +.|+||.++ +| +|+||+++ ++++.+.+...
T Consensus 253 ~~~li~Dev~~~~g~~g~~~-~~~~~-~---~-~~d---i~s~sK~l~-~G~~~~G~~~~-~~~~~~~l~~~~~~~~~~~ 321 (449)
T 3a8u_X 253 NILLVFDEVITGFGRTGSMF-GADSF-G---V-TPD---LMCIAKQVT-NGAIPMGAVIA-STEIYQTFMNQPTPEYAVE 321 (449)
T ss_dssp TCEEEEECTTTTTTTTSSSS-HHHHH-T---C-CCS---EEEECGGGG-TTSSCCEEEEE-EHHHHHHHHTCSSCTTSCS
T ss_pred CCEEEEeccccCccccCcch-hhhhc-C---C-CCC---EEEEccccc-CCCCceEEEEE-CHHHHHHhhccCccccccc
Confidence 99999999998765444321 11111 1 1 122 228899998 68 99999998 67888888753
Q ss_pred ---hcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-Cccc--CCCceeEEeeecCCcCCCCC
Q 019899 201 ---TRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLG-IRCS--ESSAGLYCWADMSGLIPSYS 274 (334)
Q Consensus 201 ---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~~~--~~~~g~~~~~~~~~~~~~~~ 274 (334)
...++.+++.+.++.++++..+ + ....++++++.+++.+.|++++ +... .+..|.++|++++......
T Consensus 322 ~~~~~t~~~~~~~~aa~~aal~~~~---~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~- 395 (449)
T 3a8u_X 322 FPHGYTYSAHPVACAAGLAALCLLQ---K--ENLVQSVAEVAPHFEKALHGIKGAKNVIDIRNFGLAGAIQIAPRDGDA- 395 (449)
T ss_dssp SCCCCTTTTCHHHHHHHHHHHHHHH---H--TTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEECCBTTBS-
T ss_pred ccccCCCcccHHHHHHHHHHHHHHH---h--cCHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeEEEEEEEEecCcccc-
Confidence 1235567888877777765322 1 2355667777888888887642 3322 1234677889987542210
Q ss_pred hhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 275 EKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 275 ~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
..+..++...|++ +||.+.|+. +++|++++. .+++++++++++|++++++.
T Consensus 396 ~~~~~~~~~~l~~-~Gv~v~~~g-------~~iRis~~~~~t~~~i~~~l~~l~~~l~~~ 447 (449)
T 3a8u_X 396 IVRPFEAGMALWK-AGFYVRFGG-------DTLQFGPTFNSKPQDLDRLFDAVGEVLNKL 447 (449)
T ss_dssp SHHHHHHHHHHHH-HTEECEEET-------TEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred cccHHHHHHHHHH-CCcEEecCC-------CEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 0022367788665 799999851 689999763 69999999999999998764
No 171
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.96 E-value=2.5e-27 Score=212.94 Aligned_cols=278 Identities=11% Similarity=0.073 Sum_probs=188.5
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhh----hhhhccCcEEEEEeCCCCCCcccc
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDR----DIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
+++.+++.++.+ +.+++++++++++.++. ++++||+|+++.|+|++... .++ ..|.+++.++++ |
T Consensus 60 lr~~la~~~g~~--~~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~-~~G~~v~~v~~~-------d 128 (393)
T 1n8p_A 60 LERAVAALENAQ--YGLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVAN-AHGVETSFTNDL-------L 128 (393)
T ss_dssp HHHHHHHHTTCS--EEEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTST-TTCSCCEEESSH-------H
T ss_pred HHHHHHHHhCCC--cEEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHH-HcCcEEEEeCCC-------h
Confidence 445555545443 56666667999999999 88999999999999986554 345 679999999852 6
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc----CcEEEEeccccccccCCCCcchhhhhh
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK----NIHVISDEIYGGSIFGNEEFVSMAEIL 156 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~----~~~vi~D~~~~~~~~~~~~~~~~~~~~ 156 (334)
+++++++++ ++++|++++|+||||.++| +++|.++|+++ |+++|+|++|+.+.+. .. .
T Consensus 129 -~~l~~~i~~------~t~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~~~-----~~---~ 190 (393)
T 1n8p_A 129 -NDLPQLIKE------NTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYIS-----NP---L 190 (393)
T ss_dssp -HHHHHHSCS------SEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-----CG---G
T ss_pred -HHHHHhccc------CceEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCccccccC-----CH---H
Confidence 788888864 7999999999999999999 99999999999 9999999999876542 11 1
Q ss_pred hccccCCCcEEEEecccccCCCCCceE-EEEeecCHHHHHHHHHhhccc--CCChHHHHHHHHhhCChHHHHHHHHHHHH
Q 019899 157 EAEEVDKDRVHIIYGLSKDLSLPGFRT-GVIYSYNESVLAAAKKLTRFC--SISAPTQRLLISMLSDTKFIQEYLETNKR 233 (334)
Q Consensus 157 ~~~~~~~~~~~~~~s~sK~~~~~g~r~-g~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 233 (334)
. .+.++++.|+||.+|.+|+|+ ||++++++++.+.+......+ +.++....++...++.. ....+
T Consensus 191 ~-----~~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~~-------~~~~~ 258 (393)
T 1n8p_A 191 N-----FGADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSPFDAWLTHRGLKTL-------HLRVR 258 (393)
T ss_dssp G-----GTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTH-------HHHHH
T ss_pred H-----cCCeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccchH-------HHHHH
Confidence 1 356789999999999889999 999985588888887654432 34555555444444432 23334
Q ss_pred HHHHHHHHHHHHHHhCC--Cc-ccCC---------------C--c-eeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeE
Q 019899 234 RIKKLYDSFVAGLKQLG--IR-CSES---------------S--A-GLYCWADMSGLIPSYSEKGELELWDKLLNIAKIN 292 (334)
Q Consensus 234 ~~~~~~~~~~~~l~~~g--~~-~~~~---------------~--~-g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~ 292 (334)
+..++++.+.+.|++.+ +. +..| . . +.++++.+++. ..+...+... ++..++.
T Consensus 259 ~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~-----~~~~~~~l~~-l~~~~~~ 332 (393)
T 1n8p_A 259 QAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGG-----AEAASKFASS-TRLFTLA 332 (393)
T ss_dssp HHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSC-----HHHHHHHHHH-CSSSEEC
T ss_pred HHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCc-----HHHHHHHHhh-CCcceEC
Confidence 45556666777776653 21 1011 1 2 45677888642 1233344444 4444555
Q ss_pred EcCCCCcCC---------------------CCCCeEEEEecC-CCcccHHHHHHHHHHH
Q 019899 293 VTPGSACHC---------------------IEPGWFRCCFTS-LTHEDIPLVIERIQKV 329 (334)
Q Consensus 293 v~~g~~~~~---------------------~~~~~iRi~~~~-~~~~~l~~~l~~l~~~ 329 (334)
+..|+.+.. ..++.+|+|++. .++++++.+.+.|+++
T Consensus 333 ~s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~ 391 (393)
T 1n8p_A 333 ESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQA 391 (393)
T ss_dssp SCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred CCCCCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 544432210 114689999995 3566666666666654
No 172
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.95 E-value=1.2e-27 Score=219.15 Aligned_cols=296 Identities=14% Similarity=0.070 Sum_probs=187.6
Q ss_pred CCcEEEecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChhhhhhhcc-------------CcEEEEEeCCC--CCCccc
Q 019899 17 PSQIVLTAGATPAVEILCFCLA--DHGNALLVPSPYYPGFDRDIRFRT-------------GVELIPVHCRS--TDNFAF 79 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~~-------------g~~v~~v~~~~--~~~~~~ 79 (334)
.++|++++|+++|+..++..+. .++++|++.+++|+++........ ...+..++.+. .+.+..
T Consensus 125 ~~~v~~~~sGseA~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 204 (453)
T 4ffc_A 125 DKRTALFNSGAEAVENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGL 204 (453)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTC
T ss_pred CcEEEEeCcHHHHHHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCcccc
Confidence 5799999999999999997664 356899999999986654432111 12455555431 122222
Q ss_pred c-HHHHHHHHHHHHHc-CCceeEEEEeCCCCCcc--cCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhh
Q 019899 80 S-ITALDQAFNQARKR-GVKVRGILICNPANPVG--NIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEI 155 (334)
Q Consensus 80 ~-~~~l~~~l~~~~~~-~~~~~~i~~~~p~nptG--~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~ 155 (334)
+ .+.++..++..... ..+..+++++.|.|++| ...+.+.+++|.++|++||+++|+||+|.++.+.+... .....
T Consensus 205 ~~~~~~~~~~~~l~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~-a~~~~ 283 (453)
T 4ffc_A 205 TGEEAARRAISRIETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWF-ASEHE 283 (453)
T ss_dssp CHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHH
T ss_pred chHHHHHHHHHHHHHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccc-hhhhc
Confidence 2 23333222221111 11345577778866665 34477789999999999999999999999876555322 11111
Q ss_pred hhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh--hcccCCChHHHHHHHHhhCChHHHHHHHHHHHH
Q 019899 156 LEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL--TRFCSISAPTQRLLISMLSDTKFIQEYLETNKR 233 (334)
Q Consensus 156 ~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 233 (334)
+....+.++||+++ .|+|+||+++ ++++++.+... ...++.|++.+.++.++++..+. + ...+
T Consensus 284 --------~~~pdi~t~sK~~~-~G~~~G~~~~-~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~----~~~~ 348 (453)
T 4ffc_A 284 --------GIVPDIVTMAKGIA-GGMPLSAVTG-RAELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRE-L----DLPA 348 (453)
T ss_dssp --------TCCCSEEEECGGGG-TTSSCEEEEE-EHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHH-T----THHH
T ss_pred --------CCCcchHhhhhhhc-CCcCeEEEEE-CHHHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhh-h----hHHH
Confidence 11222457899998 5999999998 88888877643 34567899999888888754221 1 2233
Q ss_pred HHHHHHHHHHHHHH----hCCCcccCCCceeEEeeecCCcCC-CCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEE
Q 019899 234 RIKKLYDSFVAGLK----QLGIRCSESSAGLYCWADMSGLIP-SYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFR 308 (334)
Q Consensus 234 ~~~~~~~~~~~~l~----~~g~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iR 308 (334)
+++++.+++.+.|+ +++.....+..|.++|+++..... ........++...+++ +||.+.|+..+ .+++|
T Consensus 349 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~----~~~iR 423 (453)
T 4ffc_A 349 RARAIEASVTSRLSALAEEVDIIGEVRGRGAMLAIEIVKPGTLEPDAALTKSIAAEALS-QGVLILTCGTF----GNVIR 423 (453)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSSEEEEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHH-TTEECCEECTT----SCEEE
T ss_pred HHHHHHHHHHHHHHHHHhhCCCeEEEEeeceEEEEEEecCcccCCCHHHHHHHHHHHHh-CCCEEecCCCC----CCEEE
Confidence 33344444444443 333222222335677777743111 1122345567777554 89999987644 46899
Q ss_pred EEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 309 CCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 309 i~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
++++. .+++++++++++|++++++.
T Consensus 424 i~~~~~~t~e~i~~~l~~l~~~l~~~ 449 (453)
T 4ffc_A 424 LLPPLVIGDDLLDEGITALSDIIRAK 449 (453)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99874 59999999999999998763
No 173
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.95 E-value=1.5e-27 Score=217.24 Aligned_cols=290 Identities=13% Similarity=0.074 Sum_probs=189.8
Q ss_pred CCCcEEEecCcHHHHHHHHHHhcC--CCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcc------------ccH
Q 019899 16 DPSQIVLTAGATPAVEILCFCLAD--HGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFA------------FSI 81 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~------------~~~ 81 (334)
+.+++++++|+++++..++..+.. ++++|++.+|+|.++........|..+..++.+...+.. .|+
T Consensus 108 ~~~~v~~~~~Gsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 187 (429)
T 3k28_A 108 SIEIVRMVNSGTEATMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDL 187 (429)
T ss_dssp TCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCH
T ss_pred CCCEEEEeCChHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCH
Confidence 578999999999999999987753 678999999999866544331333322222221111110 178
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEE 160 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~ 160 (334)
+++++++++. ..+++++++..++|++|.+. +.+++++|.++|++||+++|+||+|.++ ..+... .. +..
T Consensus 188 ~~le~~l~~~---~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~-~~-~~~---- 257 (429)
T 3k28_A 188 ESVKYAFEQF---GDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYNC-GQ-GYY---- 257 (429)
T ss_dssp HHHHHHHHHH---GGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTTH-HH-HHH----
T ss_pred HHHHHHHHhC---CCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcch-HH-HHh----
Confidence 9999998753 12456555544466677666 5777999999999999999999999887 544321 11 111
Q ss_pred cCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHH-----hhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHH
Q 019899 161 VDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKK-----LTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRI 235 (334)
Q Consensus 161 ~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 235 (334)
+....+.|+||.++ .|+|+||+++ ++++++.+.. ....++.+++++.++.++++..+ ++..+++
T Consensus 258 ---~~~~di~t~sK~~~-~G~~iG~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~------~~~~~~~ 326 (429)
T 3k28_A 258 ---GVTPDLTCLGKVIG-GGLPVGAYGG-KAEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT------PESYVEF 326 (429)
T ss_dssp ---TCCCSEEEECGGGG-TTSCCEEEEE-CHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC------HHHHHHH
T ss_pred ---CCCCceehhhhhhc-CCCCeEEEEE-cHHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH------HHHHHHH
Confidence 11112357999998 6999999998 8888887754 23346788899988888876543 2344555
Q ss_pred HHHHHHHHHHHHhC----CCcccCCCceeEEeeecCCcCCC-------CChhhHHHHHHHHHHhcCeEEcCCCCcCCCCC
Q 019899 236 KKLYDSFVAGLKQL----GIRCSESSAGLYCWADMSGLIPS-------YSEKGELELWDKLLNIAKINVTPGSACHCIEP 304 (334)
Q Consensus 236 ~~~~~~~~~~l~~~----g~~~~~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~ 304 (334)
+++.+++.+.|++. +.....+..|.++++.+...... .......++...|+ ++||.+.|+. .
T Consensus 327 ~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~------~ 399 (429)
T 3k28_A 327 ERKAEMLEAGLRKAAEKHGIPHHINRAGSMIGIFFTDEPVINYDAAKSSNLQFFAAYYREMV-EQGVFLPPSQ------F 399 (429)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHH-HTTEECCSST------T
T ss_pred HHHHHHHHHHHHHHHhhCCCCEEEEeeccEEEEEEecCCcccccccccccHHHHHHHHHHHH-HCCeEEecCC------C
Confidence 56666666666543 33222223345566666432110 11223456777755 4899999864 3
Q ss_pred CeEEEEecCCCcccHHHHHHHHHHHHHHcC
Q 019899 305 GWFRCCFTSLTHEDIPLVIERIQKVAETCK 334 (334)
Q Consensus 305 ~~iRi~~~~~~~~~l~~~l~~l~~~~~~~~ 334 (334)
+.+|+++. .+++++++++++|++++++.+
T Consensus 400 ~~~r~~~~-~t~e~i~~~l~~l~~~l~~~~ 428 (429)
T 3k28_A 400 EGLFLSTV-HSDADIEATIAAAEIAMSKLK 428 (429)
T ss_dssp SCBCCCTT-CCHHHHHHHHHHHHHHHHTCC
T ss_pred CCEEEECC-CCHHHHHHHHHHHHHHHHHHh
Confidence 46788765 799999999999999998753
No 174
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.95 E-value=1.4e-27 Score=218.50 Aligned_cols=298 Identities=11% Similarity=0.070 Sum_probs=186.9
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcC----C----CCeEEecCCCCCChhhhhhhccC----------
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLAD----H----GNALLVPSPYYPGFDRDIRFRTG---------- 63 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~----~----gd~vl~~~p~~~~~~~~~~~~~g---------- 63 (334)
++++.+. ++.+.++|++++|+++|+..++..+.. + +|+|++.+|+|+++........|
T Consensus 93 a~~l~~~----~~~~~~~v~~~~sGseA~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 168 (448)
T 3dod_A 93 AETLIDI----SPKKLTRVFYSDSGAEAMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGP 168 (448)
T ss_dssp HHHHHHH----SCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEC-------------------------
T ss_pred HHHHHHh----CCCCCCEEEEeCchHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccC
Confidence 4455543 344568999999999999999988764 4 49999999999876544331222
Q ss_pred --cEEEEEeCCCCCCcc-----------ccHHHHHHHHHHHHHcCCceeEEEEeCCC-CCccc-CCCHHHHHHHHHHHHh
Q 019899 64 --VELIPVHCRSTDNFA-----------FSITALDQAFNQARKRGVKVRGILICNPA-NPVGN-IIPRETLYELLDFARE 128 (334)
Q Consensus 64 --~~v~~v~~~~~~~~~-----------~~~~~l~~~l~~~~~~~~~~~~i~~~~p~-nptG~-~~~~~~l~~i~~~~~~ 128 (334)
..+..++. ++.+. .|+++|+++++.. ..++++|++..++ |++|. +.+.+.+++|.++|++
T Consensus 169 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~ 243 (448)
T 3dod_A 169 LMFESYKAPI--PYVYRSESGDPDECRDQCLRELAQLLEEH---HEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTT 243 (448)
T ss_dssp ----CEEECC--CCCTTSSSCCHHHHHHHHHHHHHHHHHHH---GGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHH
T ss_pred CCCCceEeCC--CccccCCccchhhhhHHHHHHHHHHHHhC---CCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHH
Confidence 12333443 22222 2588999998732 1256666665556 88885 5577789999999999
Q ss_pred cCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHH--------
Q 019899 129 KNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKK-------- 199 (334)
Q Consensus 129 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~-------- 199 (334)
||+++|+||+|.++.+.|..+. .... +....+.++||+++ .| +|+||+++ ++++++.+..
T Consensus 244 ~~~~lI~DEv~~g~g~~g~~~a-~~~~--------~~~~di~t~sK~l~-~G~~~ig~v~~-~~~~~~~~~~~~~~~~~~ 312 (448)
T 3dod_A 244 YDVLMIVDEVATGFGRTGKMFA-CEHE--------NVQPDLMAAGKGIT-GGYLPIAVTFA-TEDIYKAFYDDYENLKTF 312 (448)
T ss_dssp TTCEEEEECTTTTTTTTSSSSG-GGGG--------TCCCSEEEECGGGG-TTSSCCEEEEE-EHHHHHTTCSCGGGCCCC
T ss_pred hCCEEEEeccccCCCcccchhh-hhhc--------CCCCCEEEeccccc-CCcCceEEEEE-CHHHHHHhhhccccCCcc
Confidence 9999999999998766554321 1111 11112347899998 69 59999998 8888888865
Q ss_pred -hhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHh---CCCcccCCCceeEEeeecCCcCCCCCh
Q 019899 200 -LTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQ---LGIRCSESSAGLYCWADMSGLIPSYSE 275 (334)
Q Consensus 200 -~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~g~~~~~~~~g~~~~~~~~~~~~~~~~ 275 (334)
....++.+++.+.++.++++..+. +...++++++.+++.+.|++ .+.....+..|.++|+.++........
T Consensus 313 ~~~~t~~~~~~~~aaa~aal~~~~~-----~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 387 (448)
T 3dod_A 313 FHGHSYTGNQLGCAVALENLALFES-----ENIVEQVAEKSKKLHFLLQDLHALPHVGDIRQLGFMCGAELVRSKETKEP 387 (448)
T ss_dssp CCCCTTTTCHHHHHHHHHHHHHHHH-----TTHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEETTEEEEEECSBTTTTBC
T ss_pred cccCCCCcCHHHHHHHHHHHHHHhc-----ccHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeeeEEEEEEEccCcccccc
Confidence 234467788888888888754321 12233344444444444443 332211222466778888754221100
Q ss_pred ---h--hHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 276 ---K--GELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 276 ---~--~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
. ...++...+++ +||.+.|+ .+++|++++. .+++++++++++|++++++
T Consensus 388 ~~~~~~~~~~~~~~l~~-~Gv~~~~~-------~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 442 (448)
T 3dod_A 388 YPADRRIGYKVSLKMRE-LGMLTRPL-------GDVIAFLPPLASTAEELSEMVAIMKQAIHE 442 (448)
T ss_dssp CCGGGCHHHHHHHHHHH-TTEECCEE-------TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHH-CCcEEecc-------CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 0 13567788665 79999885 2689998664 6999999999999999875
No 175
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.95 E-value=1.3e-26 Score=208.80 Aligned_cols=262 Identities=17% Similarity=0.181 Sum_probs=182.3
Q ss_pred cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhh----hhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 19 QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDI----RFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 19 ~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
+.++++++++++..++.+++++||+|+++.|+|+++...+ . ..|.+++.++. .|++++++++++
T Consensus 82 ~~i~~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~-------~d~~~l~~~i~~---- 149 (398)
T 1gc0_A 82 AGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIG-EFGVKLRHVDM-------ADLQALEAAMTP---- 149 (398)
T ss_dssp EEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGG-GGTCEEEEECT-------TCHHHHHHHCCT----
T ss_pred cEEEECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHH-HcCCEEEEECC-------CCHHHHHHhcCC----
Confidence 5666677789999999999999999999999999987765 4 67999999885 278999998875
Q ss_pred CCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEecccc
Q 019899 95 GVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSK 174 (334)
Q Consensus 95 ~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK 174 (334)
++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|..+.+.. ++ . .+.++++.|+||
T Consensus 150 --~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~~----~~----~-----~~~d~~~~S~sK 211 (398)
T 1gc0_A 150 --ATRVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQR----PL----E-----LGADLVVHSATK 211 (398)
T ss_dssp --TEEEEEEESSCTTTCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHCC----GG----G-----GTCSEEEEETTT
T ss_pred --CCeEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCCcccccCC----ch----h-----hCceEEEECCcc
Confidence 7999999999999999998 9999999999999999999998654321 11 1 456788999999
Q ss_pred cCCCCCceE-EEEeecCHHHHH-HHHHhhcc---cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 019899 175 DLSLPGFRT-GVIYSYNESVLA-AAKKLTRF---CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL 249 (334)
Q Consensus 175 ~~~~~g~r~-g~i~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 249 (334)
.++.+|.|+ |++++ +++..+ .++..... ++.++..+.++...++.. ..+.++..++.+.+.+.|+++
T Consensus 212 ~~~~~~~~~~G~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~l~~~L~~~ 283 (398)
T 1gc0_A 212 YLSGHGDITAGIVVG-SQALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKTL-------NLRMDRHCANAQVLAEFLARQ 283 (398)
T ss_dssp TTTCSSSCCCEEEEE-CHHHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTTH-------HHHHHHHHHHHHHHHHHHHTC
T ss_pred ccCCCCCCeEEEEEE-ChHHHHHHHHHHhhccCCCCCCHHHHHHHHhccchH-------HHHHHHHHHHHHHHHHHHhcC
Confidence 999889887 99998 665544 55544333 346777777666666542 233444555666666666654
Q ss_pred C-C--------------cccC----CCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcC---CCC------cC-
Q 019899 250 G-I--------------RCSE----SSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTP---GSA------CH- 300 (334)
Q Consensus 250 g-~--------------~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~---g~~------~~- 300 (334)
+ + ++.. ..+++ +.++++.. .+....++++.++.+.. |+. +.
T Consensus 284 ~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~-~~~~l~~~---------~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~ 353 (398)
T 1gc0_A 284 PQVELIHYPGLASFPQYTLARQQMSQPGGM-IAFELKGG---------IGAGRRFMNALQLFSRAVSLGDAESLAQHPAS 353 (398)
T ss_dssp TTEEEEEEC----------------CCTTE-EEEEETTH---------HHHHHHHHHHCSSSEECSCCSCSSCEEECGGG
T ss_pred CCeeEEECCCCCCCcCHHHHHhhCCCCceE-EEEEECCC---------HHHHHHHHHhCCCceeccCCCCcceeeecccc
Confidence 2 1 1111 12444 44566531 23445557778877654 321 10
Q ss_pred -----C---------CCCCeEEEEecC-CCcccHHHHHHHHHH
Q 019899 301 -----C---------IEPGWFRCCFTS-LTHEDIPLVIERIQK 328 (334)
Q Consensus 301 -----~---------~~~~~iRi~~~~-~~~~~l~~~l~~l~~ 328 (334)
. ..++.+|+|++. .++++++.+.+.|++
T Consensus 354 ~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~ 396 (398)
T 1gc0_A 354 MTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKA 396 (398)
T ss_dssp TTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred cccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHh
Confidence 0 014799999994 345556665555554
No 176
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.95 E-value=1.5e-26 Score=207.68 Aligned_cols=263 Identities=14% Similarity=0.140 Sum_probs=188.1
Q ss_pred cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhh----hhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 19 QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDI----RFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 19 ~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
++++++++++++..++.+++++||+|+++.|+|+++...+ + ..|.+++.++. .|++++++++++
T Consensus 76 ~~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~-~~g~~~~~v~~-------~d~~~l~~~i~~---- 143 (389)
T 3acz_A 76 GSAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLP-RFGIEVDLIDT-------SDVEKVKAAWKP---- 143 (389)
T ss_dssp EEEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHH-HTTCEEEEECT-------TCHHHHHHTCCT----
T ss_pred eEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHH-HcCCEEEEECC-------CCHHHHHHhcCC----
Confidence 6777888889999999999999999999999999877764 5 68999999985 378999998875
Q ss_pred CCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEecccc
Q 019899 95 GVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSK 174 (334)
Q Consensus 95 ~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK 174 (334)
++++|++++|+||||.+.| +++|.++|+++|+++|+|++|..+.+. .++ . .+.++++.|+||
T Consensus 144 --~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~livD~~~~~~~~~----~~~----~-----~~~di~~~S~sK 205 (389)
T 3acz_A 144 --NTKMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATFTSPCFL----KPL----E-----LGADIALHSVSK 205 (389)
T ss_dssp --TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTC----CGG----G-----TTCSEEEEETTT
T ss_pred --CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccc----Ccc----c-----cCCeEEEECChh
Confidence 7899999999999999999 999999999999999999999875431 111 1 456789999999
Q ss_pred cCCCCCceE-EEEeecCHHHHHHHHHhhcc--cCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-
Q 019899 175 DLSLPGFRT-GVIYSYNESVLAAAKKLTRF--CSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLG- 250 (334)
Q Consensus 175 ~~~~~g~r~-g~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g- 250 (334)
.++.+|.|+ ||++++++++.+.++..... .+.++..+.++...++.. . .+.++..++.+.+.+.|++++
T Consensus 206 ~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~l---~----~r~~~~~~~~~~l~~~l~~~~~ 278 (389)
T 3acz_A 206 YINGHGDVIGGVSSAKTAEDIATIKFYRKDAGSLMAPMDAFLCARGMKTL---P----IRMQIHMENGLKVAKFLEQHEK 278 (389)
T ss_dssp TTTCSSCCCCEEEEESSHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTH---H----HHHHHHHHHHHHHHHHHHHCTT
T ss_pred hccCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcCccHH---H----HHHHHHHHHHHHHHHHHHcCCC
Confidence 998899998 99998443888888765543 334555566555555542 1 222334445555556665531
Q ss_pred --------C------ccc----CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcC---C------CCcCC--
Q 019899 251 --------I------RCS----ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTP---G------SACHC-- 301 (334)
Q Consensus 251 --------~------~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~---g------~~~~~-- 301 (334)
+ ++. ...++ ++.+.++. .+....++++.||.+.+ | ..+..
T Consensus 279 v~~~~~~~L~~~~~~~~~~~~~~g~g~-~~~~~l~~----------~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~ 347 (389)
T 3acz_A 279 IVKVNHPGLESFPGHDIAKKQMTGYGS-TFLFEMKS----------FEAAKKLMEHLKVCTLAVSLGCVDTLIEHPASMT 347 (389)
T ss_dssp EEEEECTTSTTSTTHHHHHHHCSSCCS-EEEEEESS----------HHHHHHHHTTCSSSEEBSCCCCSSCEEECTTTTT
T ss_pred eeEEECCCCCCCccHHHHHhhCCCCCe-EEEEEECC----------HHHHHHHHHhCCCcEECcCCCCcccEeeCCcccc
Confidence 1 111 11233 44466642 13344557778887765 3 22211
Q ss_pred -------------CCCCeEEEEecCCCcccHHHHHHHHHHHHHH
Q 019899 302 -------------IEPGWFRCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 302 -------------~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
..++.+|+|++ .++.++.++.|.+++++
T Consensus 348 ~~~~~~~~~~~~g~~~~~iRlsvg---~~~~~~li~~l~~al~~ 388 (389)
T 3acz_A 348 HAAVPENIMRKQGITPELVRISVG---IENVDDIIADLKQALEL 388 (389)
T ss_dssp TSSSCHHHHHHHTCCTTEEEEECC---SSCHHHHHHHHHHHHTC
T ss_pred cccCCHHHHHhcCCCcCeEEEEec---cCCHHHHHHHHHHHHhh
Confidence 12578999998 45888888888888764
No 177
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.95 E-value=4.4e-27 Score=213.74 Aligned_cols=278 Identities=13% Similarity=0.158 Sum_probs=195.2
Q ss_pred CcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 18 SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
+++++|+|+++++..++.++. +||+|+++.|+|+++...+. ..|.+++.+++++ +++.+|++++++++++ +
T Consensus 68 ~~v~~~~ggt~al~~~l~~l~-~gd~Vlv~~~~~~~~~~~~~-~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~------~ 138 (424)
T 2po3_A 68 RHAVATCNATAGLQLLAHAAG-LTGEVIMPSMTFAATPHALR-WIGLTPVFADIDP-DTGNLDPDQVAAAVTP------R 138 (424)
T ss_dssp SEEEEESCHHHHHHHHHHHHT-CCSEEEEESSSCTHHHHHHH-HTTCEEEEECBCT-TTSSBCHHHHGGGCCT------T
T ss_pred CeEEEeCCHHHHHHHHHHHcC-CCCEEEECCCccHHHHHHHH-HcCCEEEEEecCC-CcCCcCHHHHHHhhCc------C
Confidence 589999999999999999985 78999999999999999888 8999999999853 4678999999998875 7
Q ss_pred eeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEecccc-ccccCCCCcchhhhhhhccccCCCcEEEEecccccC
Q 019899 98 VRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYG-GSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDL 176 (334)
Q Consensus 98 ~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~ 176 (334)
+++|+++ ||||...+ +++|.++|+++|++||+|++|+ ++.+.+. ++.. .+ .+++.|+||..
T Consensus 139 ~~~v~~~---~~tG~~~~---l~~i~~la~~~~~~li~Dea~~~g~~~~~~---~~~~--------~~-di~~~S~sk~K 200 (424)
T 2po3_A 139 TSAVVGV---HLWGRPCA---ADQLRKVADEHGLRLYFDAAHALGCAVDGR---PAGS--------LG-DAEVFSFHATK 200 (424)
T ss_dssp EEEEEEE---CGGGCCCC---HHHHHHHHHHTTCEEEEECTTCTTCEETTE---ETTS--------SS-SEEEEECCTTS
T ss_pred CcEEEEE---CCCCCcCC---HHHHHHHHHHcCCEEEEECccccCCeECCe---eccc--------cc-CEEEEeCCCCC
Confidence 8888876 48999877 9999999999999999999998 4555432 1111 12 27888999555
Q ss_pred CCCCceEEEEeecCHHHHHHHHHhhcccC----------CC-hHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHH
Q 019899 177 SLPGFRTGVIYSYNESVLAAAKKLTRFCS----------IS-APTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAG 245 (334)
Q Consensus 177 ~~~g~r~g~i~~~~~~~~~~~~~~~~~~~----------~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (334)
+++|.|+||++++++++.+.++....... .+ .+.+.+++..+.. .+.+.+..++..++++++.+.
T Consensus 201 ~l~~~~~G~~v~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~----~~~~~~~~~~~~~~~~~l~~~ 276 (424)
T 2po3_A 201 AVNAFEGGAVVTDDADLAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLTS----LDAFPEVIDRNRRNHAAYREH 276 (424)
T ss_dssp SSCCSSCEEEEESCHHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCeEEEeCCHHHHHHHHHHHhcCccccccccccCcCCCcCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHH
Confidence 55668999999955888888876543211 00 1112222222211 223455667777888888899
Q ss_pred HHhC-CCcccC-CCce----eEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCCC--------------CC-
Q 019899 246 LKQL-GIRCSE-SSAG----LYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHCI--------------EP- 304 (334)
Q Consensus 246 l~~~-g~~~~~-~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~--------------~~- 304 (334)
|+++ ++++.. +.++ +++++.++.... ..+..++... ++++||.+.+. |+.. .+
T Consensus 277 L~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~l~~~-L~~~gI~v~~~--~~~~~~~~~~~~~~g~~~~~~ 350 (424)
T 2po3_A 277 LADLPGVLVADHDRHGLNNHQYVIVEIDEATT---GIHRDLVMEV-LKAEGVHTRAY--FSPGCHELEPYRGQPHAPLPH 350 (424)
T ss_dssp TCSCTTEEECCGGGGSCCCCCCEEEEECHHHH---SSCHHHHHHH-HHHTTEECBCT--TCSCGGGSTTTTTSCCCCCHH
T ss_pred hccCCCccccCCCCCCccccEEEEEEECCccc---hhhHHHHHHH-HHHCCCceecc--cCCccccchhhhhcCCCCChh
Confidence 9876 777654 3332 334466653100 0123567776 56689999872 2210 01
Q ss_pred ------CeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 305 ------GWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 305 ------~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
..+|+++.. .+++|++++++.|++++++
T Consensus 351 ~~r~~~~~l~l~~~~~~t~e~i~~~~~~L~~~~~~ 385 (424)
T 2po3_A 351 TERLAARVLSLPTGTAIGDDDIRRVADLLRLCATR 385 (424)
T ss_dssp HHHHHTTEEEECCSTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCEEEeeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 127776444 6999999999999998765
No 178
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.95 E-value=1.1e-26 Score=215.27 Aligned_cols=309 Identities=12% Similarity=0.166 Sum_probs=214.9
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcC--------------CCCeEEecCCCCCChhhhhhhccCc---
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLAD--------------HGNALLVPSPYYPGFDRDIRFRTGV--- 64 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~--------------~gd~vl~~~p~~~~~~~~~~~~~g~--- 64 (334)
++|+.+.++ ++.+.+.+++|+|+|+++..++.++.+ +++.|+++.++|.++...++ ..|.
T Consensus 141 ~~~l~~~~g--~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~~~~~~-~~g~g~~ 217 (511)
T 3vp6_A 141 LKKMREIVG--WSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGA-ALGFGTD 217 (511)
T ss_dssp HHHHHHHHT--CCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHHHHHHH-HTTSCGG
T ss_pred HHHHHHHhC--CCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHHHHHHHH-HcCCCCC
Confidence 567888777 544467899999999999988877654 56789999999999999998 8887
Q ss_pred EEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEecccccccc
Q 019899 65 ELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIF 144 (334)
Q Consensus 65 ~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~ 144 (334)
+++.++++ .++.+|+++|+++|++....+..+++|++++|+||+|.+.+ +++|.++|++||+++++|++|+.+..
T Consensus 218 ~~~~v~~d--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~---l~~I~~ia~~~~~~lhvD~a~~~~~~ 292 (511)
T 3vp6_A 218 NVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP---IQEIADICEKYNLWLHVDAAWGGGLL 292 (511)
T ss_dssp GEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCC---HHHHHHHHHHHTCEEEEEETTGGGGG
T ss_pred cEEEeecC--CCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccccc---HHHHHHHHHHcCCEEEEEccchhhHh
Confidence 89999984 55789999999999987666666999999999999999988 99999999999999999999987554
Q ss_pred CCCCcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh-ccc----------------C--
Q 019899 145 GNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT-RFC----------------S-- 205 (334)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~-~~~----------------~-- 205 (334)
.......... +. .+.+.++.+++|+++.+ ..+|+++++++.+.+...... .+. +
T Consensus 293 ~~~~~~~~~~-----g~-~~aDsv~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 365 (511)
T 3vp6_A 293 MSRKHRHKLN-----GI-ERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQ 365 (511)
T ss_dssp GCTTTGGGGT-----TG-GGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSC
T ss_pred hChhhhhhcc-----CC-ccCCEEEECcccccCCC-cCeEEEEEeCHHHHHHHhccCCccccCcccccccccCccCCCCC
Confidence 3221111110 00 23356778999999744 668888887776655543211 110 0
Q ss_pred ----CChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccC---CCceeEEeeecCCcCCCC--Ch
Q 019899 206 ----ISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSE---SSAGLYCWADMSGLIPSY--SE 275 (334)
Q Consensus 206 ----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~---~~~g~~~~~~~~~~~~~~--~~ 275 (334)
.......++..++ ..+.+.++.++..++++++.+.|++. |+++.. +..+.++|...|...... ..
T Consensus 366 ~~r~~~al~~~~al~~~-----g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~~~~v~f~~~p~~~~~~~~~~ 440 (511)
T 3vp6_A 366 CGRHVDIFKFWLMWKAK-----GTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSP 440 (511)
T ss_dssp SSCCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCCSSSCEEEEECCGGGSSCCCCH
T ss_pred CCCchHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccccccccch
Confidence 0112222222222 24566788889999999999999987 888765 555665554444432211 00
Q ss_pred -------hhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEec-C-CCcccHHHHHHHHHHHHHH
Q 019899 276 -------KGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFT-S-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 276 -------~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~-~-~~~~~l~~~l~~l~~~~~~ 332 (334)
....++.+.|.+ .|+.+.. ..+.....+++|++++ . .+++|++.+++.|+++.++
T Consensus 441 ~~~~~l~~~~~~l~~~L~~-~G~~~~~-~~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~~~~~~ 504 (511)
T 3vp6_A 441 QRREKLHKVAPKIKALMME-SGTTMVG-YQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQD 504 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HTSCEEE-EEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHC-
T ss_pred hHHHHHHHHHHHHHHHHHh-cCCEEEE-EEEeCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 112357777555 5654432 1111112357999984 3 5899999999999988765
No 179
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.95 E-value=5e-27 Score=215.11 Aligned_cols=297 Identities=11% Similarity=0.073 Sum_probs=201.8
Q ss_pred hhhhhcCCCCCCCCcEEEecCcH-HHHHHHHHHhcC--CCCeEEecCCCCCChhhhhhhccCcEEEEEeCCC-CCCcccc
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGAT-PAVEILCFCLAD--HGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRS-TDNFAFS 80 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~-~~~~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~-~~~~~~~ 80 (334)
+++.+++.++++++ +++|+|+| .++..++.++.. +++.|+++.++|+++...++ ..|.+++.+++.+ ++++.+|
T Consensus 138 ~~~~la~~~g~~~~-~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~-~~G~~~~~v~~~~~~~~~~~d 215 (456)
T 2z67_A 138 ILESFFKQLGLNVH-AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVS-FVGMNMRLVETVLDGDRVYVP 215 (456)
T ss_dssp HHHHHHHHTTCCCE-EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHH-HTTCEEEEECCEEETTEEECC
T ss_pred HHHHHHHHcCCCCC-EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHH-HcCCCceEEEEeccCCCCCcC
Confidence 33444444556666 99999999 566655555433 67789999999999999888 8999999988632 3567899
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchh-hhhhhcc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSM-AEILEAE 159 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~-~~~~~~~ 159 (334)
+++|++++++.... .++.+|++++|+||||.+.| +++|.++|+++|+++++|++|+.+.++ ..+. .....
T Consensus 216 ~~~l~~~i~~~~~~-~~~~~vv~~~~nn~tG~i~~---l~~I~~la~~~g~~v~vD~A~~~~~~g---~~~~~~~~~~-- 286 (456)
T 2z67_A 216 VEDIENAIKKEIEL-GNRPCVLSTLTFFPPRNSDD---IVEIAKICENYDIPHIINGAYAIQNNY---YLEKLKKAFK-- 286 (456)
T ss_dssp HHHHHHHHHHHHHT-TCCEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHH---HHHHHHHHHT--
T ss_pred HHHHHHHHHHHhhC-CCeEEEEEeCCCCCCCCcCC---HHHHHHHHHHcCCcEEEECcchHHHHH---hhHHHHHhhC--
Confidence 99999999321111 26777889999999999999 999999999999999999999865431 1111 11111
Q ss_pred ccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHH
Q 019899 160 EVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLY 239 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (334)
.+.++++.|++|+++ .+.++|+++++++++++.+......+...+.. .++...+... ..+.+.+..++..+++
T Consensus 287 ---~~~D~~~~s~hK~~~-~p~g~G~l~~~~~~~~~~l~~~~~g~~~~~~~-~~~~aal~~l--~~~~~~~~~~~~~~~~ 359 (456)
T 2z67_A 287 ---YRVDAVVSSSDKNLL-TPIGGGLVYSTDAEFIKEISLSYPGRASATPV-VNTLVSLLSM--GSKNYLELVKNQKNSK 359 (456)
T ss_dssp ---SCCSEEEEEHHHHHC-CCSSCEEEEESCHHHHHHHHTTSCSCBCSHHH-HHHHHHHHHH--HHHHHHHHHHHHHHHH
T ss_pred ---CCCCEEEEcCCCCcC-CCCCeEEEEEcCHHHHhhcCcCCCCCCCCCHH-HHHHHHHHHH--HHHHHHHHHHHHHHHH
Confidence 134467889999765 56789999997788877774322222111211 1122222111 1344577788899999
Q ss_pred HHHHHHHHhC----CCcccCCCceeEEeeec--CCcCCCCChhhHHHHHHHHHHhcCe---EEc------CCCCcCCCCC
Q 019899 240 DSFVAGLKQL----GIRCSESSAGLYCWADM--SGLIPSYSEKGELELWDKLLNIAKI---NVT------PGSACHCIEP 304 (334)
Q Consensus 240 ~~~~~~l~~~----g~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~ll~~~gi---~v~------~g~~~~~~~~ 304 (334)
+++.+.|++. |+.+..+. ++ +++.+ +.. ..++...|.+ +|| .+. +|..|.....
T Consensus 360 ~~l~~~L~~~~~~~g~~v~~~~-~~-v~~~~~~~~~--------~~~l~~~L~~-~gi~~~rv~~~~g~f~G~~~~~~~~ 428 (456)
T 2z67_A 360 KLLDELLNDLSKKTGGKFLDVE-SP-IASCISVNSD--------PVEIAAKLYN-LRVTGPRGIKKTDHFGNCYLGTYTH 428 (456)
T ss_dssp HHHHHHHHHHHHHSSCCBCCCC-CS-SEEEEECSSC--------HHHHHHHHHH-TTEESCEEECTTCHHHHTCSSCCSC
T ss_pred HHHHHHHHhcccccCCEecCCC-Ce-EEEEEecccH--------HHHHHHHHHH-cCCCcceEEeecCccccccccccCc
Confidence 9999999887 77776666 43 34555 321 2467777554 665 343 1334433335
Q ss_pred CeEEEEecC-CCcccHHHHHHHHHHHH
Q 019899 305 GWFRCCFTS-LTHEDIPLVIERIQKVA 330 (334)
Q Consensus 305 ~~iRi~~~~-~~~~~l~~~l~~l~~~~ 330 (334)
+++|++++. .+++++++++++|++++
T Consensus 429 ~~vr~s~~~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 429 DYIVMNAAIGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp CEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred chhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence 799999884 69999999999998764
No 180
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.95 E-value=1.1e-26 Score=210.81 Aligned_cols=279 Identities=14% Similarity=0.163 Sum_probs=196.7
Q ss_pred cEEEecCcHHHHHHHHHHh-cCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 19 QIVLTAGATPAVEILCFCL-ADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 19 ~i~~~~g~~~~~~~~~~~l-~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
++++++++++++..++.++ +++||+|+++.|+|.++...+. ..|.+++.+++++ +++.+|++++++++++ +
T Consensus 59 ~~i~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~------~ 130 (418)
T 2c81_A 59 YCVPTTSGSTALMLALEALGIGEGDEVIVPSLTWIATATAVL-NVNALPVFVDVEA-DTYCIDPQLIKSAITD------K 130 (418)
T ss_dssp EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHH-HTTCEEEEECBCT-TTCSBCHHHHGGGCCT------T
T ss_pred cEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCccHhHHHHHH-HcCCEEEEEecCC-CCCCcCHHHHHHhhCC------C
Confidence 5777888899999999999 8999999999999999999998 8999999999853 3678999999998875 7
Q ss_pred eeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccc-cCCCCcchhhhhhhccccCCCcEEEEecc--cc
Q 019899 98 VRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSI-FGNEEFVSMAEILEAEEVDKDRVHIIYGL--SK 174 (334)
Q Consensus 98 ~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--sK 174 (334)
+++|+++ ||||...+ +++|.++|+++|++||+|++|+.+. +++.. +.. .+ ++.+.|+ ||
T Consensus 131 ~~~v~~~---~~~G~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~---~~~--------~~-~~~~~s~s~~K 192 (418)
T 2c81_A 131 TKAIIPV---HLFGSMAN---MDEINEIAQEHNLFVIEDCAQSHGSVWNNQR---AGT--------IG-DIGAFSCQQGK 192 (418)
T ss_dssp EEEECCB---CCTTCCCC---HHHHHHHHHHTTCEEEEECTTCTTCEETTEE---TTS--------SS-SEEEEECCTTS
T ss_pred CeEEEEe---CCcCCccc---HHHHHHHHHHCCCEEEEECcccccCccCCEe---ccc--------cc-ceEEEeccCCc
Confidence 8877764 58999877 9999999999999999999999865 43321 111 12 2556677 99
Q ss_pred cCCCCCceEEEEeecCHHHHHHHHHhhccc--------------C--C---C--------hHHHHHHHHhhCChHHHHHH
Q 019899 175 DLSLPGFRTGVIYSYNESVLAAAKKLTRFC--------------S--I---S--------APTQRLLISMLSDTKFIQEY 227 (334)
Q Consensus 175 ~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~--------------~--~---~--------~~~~~~~~~~l~~~~~~~~~ 227 (334)
.++. | +.||++++++++.+.++...... . . + ...+.++... . .+.
T Consensus 193 ~~~~-g-~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~--~----l~~ 264 (418)
T 2c81_A 193 VLTA-G-EGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAILLD--Q----LQE 264 (418)
T ss_dssp SSCS-S-SCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHHHH--H----HTT
T ss_pred ccCC-C-CeEEEEECCHHHHHHHHHHHHhCccccccccccccchhhccccccccCcCCCcCHHHHHHHHH--H----HHH
Confidence 9985 8 99999986688888776543221 1 0 0 0111111111 0 112
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC-CCccc-CCCc-eeEE----eeecCCcCCCCChhhHHHHHHHHHHhcCeE---EcCCC
Q 019899 228 LETNKRRIKKLYDSFVAGLKQL-GIRCS-ESSA-GLYC----WADMSGLIPSYSEKGELELWDKLLNIAKIN---VTPGS 297 (334)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~l~~~-g~~~~-~~~~-g~~~----~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~---v~~g~ 297 (334)
+.+..++.+++++++.+.|+++ ++++. .+.+ +... .+.++.... ...+..++...|.+++||. +.++.
T Consensus 265 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~L~~~~gI~~~~v~~~~ 342 (418)
T 2c81_A 265 LDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTYYGYVFRFDPVKF--GGLNADQFCEILREKLNMGTFYLHPPY 342 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCCSEEEEEECGGGT--TTCCHHHHHHHHHHHHTCCTTTEECCC
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCcccccEEEEEEEccccc--cccCHHHHHHHHHHcCCCCcccccccc
Confidence 3445566667788889999887 77776 3444 3322 266653100 0113467888866544999 88765
Q ss_pred CcCC---------------------------CC-------CCeEEEEecC-C-CcccHHHHHHHHHHHHHHc
Q 019899 298 ACHC---------------------------IE-------PGWFRCCFTS-L-THEDIPLVIERIQKVAETC 333 (334)
Q Consensus 298 ~~~~---------------------------~~-------~~~iRi~~~~-~-~~~~l~~~l~~l~~~~~~~ 333 (334)
.... .- .+.+|++++. . +++|++++++.|++++++.
T Consensus 343 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~gt~edi~~~~~~l~~~~~~~ 414 (418)
T 2c81_A 343 LPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIHHAILLAEPSHLSLLVDAVAELARKF 414 (418)
T ss_dssp CCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHTT
T ss_pred cccccCchhcccccccccccccccccccccCCChHHHHHHhCEEEecCCccCCCHHHHHHHHHHHHHHHHhh
Confidence 2210 00 1479999975 7 8999999999999998764
No 181
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.95 E-value=1.4e-27 Score=218.65 Aligned_cols=292 Identities=13% Similarity=0.012 Sum_probs=200.8
Q ss_pred CCCCCCCc-----EEEecCcHHHHHHHHHHhcC--------CC-----CeEEecCCCCCChhhhhhhccCcEEEEEeCCC
Q 019899 12 AVSFDPSQ-----IVLTAGATPAVEILCFCLAD--------HG-----NALLVPSPYYPGFDRDIRFRTGVELIPVHCRS 73 (334)
Q Consensus 12 ~~~~~~~~-----i~~~~g~~~~~~~~~~~l~~--------~g-----d~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~ 73 (334)
.++++.++ +++|+|+++++..++.++.+ +| ++|+++. +|.++...+. ..|.+++.+|+++
T Consensus 93 l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~-~~G~~v~~v~~~~ 170 (452)
T 2dgk_A 93 LWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFAR-YWDVELREIPMRP 170 (452)
T ss_dssp HTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHHHHHH-HTTCEEEECCCBT
T ss_pred HhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHHHHHH-HcCceEEEEecCC
Confidence 34455554 99999999999999888753 44 5899999 9999999888 8999999999843
Q ss_pred CCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc------CcEEEEecccccccc---
Q 019899 74 TDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK------NIHVISDEIYGGSIF--- 144 (334)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~------~~~vi~D~~~~~~~~--- 144 (334)
+++.+|+++|+++|++ ++++|++++|+||||.+.| +++|.++|+++ ++++++|++|+.+..
T Consensus 171 -~~~~~d~~~l~~~i~~------~t~~v~~~~~~n~tG~~~~---l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~ 240 (452)
T 2dgk_A 171 -GQLFMDPKRMIEACDE------NTIGVVPTFGVTYTGNYEF---PQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFV 240 (452)
T ss_dssp -TBCSCCHHHHHHHCCT------TEEEEECBBSCTTTCBBCC---HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHH
T ss_pred -CCCeECHHHHHHHHhh------CCEEEEEEcCCcCCcccCC---HHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhh
Confidence 3688999999999976 7899999999999999998 88899999985 999999999987642
Q ss_pred CCCCcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHH-HHHHHhhccc-----------CC---ChH
Q 019899 145 GNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVL-AAAKKLTRFC-----------SI---SAP 209 (334)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~-~~~~~~~~~~-----------~~---~~~ 209 (334)
.+.....+ .. .+.+.+..|++|++ +.|.++|+++++++.+. +.+.....+. +. ...
T Consensus 241 ~~~~~~~~-~~-------~~~d~~~~~~hK~~-~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 311 (452)
T 2dgk_A 241 APDIVWDF-RL-------PRVKSISASGHKFG-LAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVI 311 (452)
T ss_dssp CTTCCCST-TS-------TTEEEEEEETTTTT-CCCSSCEEEEESSGGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHH
T ss_pred Cccchhhc-CC-------CCCcEEEECccccc-CCCCCeEEEEEcCHHHHHHHhccCccccCCCCCCcccCCCChhHHHH
Confidence 11100111 00 35566778999954 58889999999665432 3332111111 11 112
Q ss_pred HHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCC----CceeEEeeecCCcCCCCChhhHHHHHHH
Q 019899 210 TQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSES----SAGLYCWADMSGLIPSYSEKGELELWDK 284 (334)
Q Consensus 210 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (334)
.+.++...+ ..+.+.++.++..++++++.+.|++. ++++..+ ....++.++++.... ...+..++.+.
T Consensus 312 ~~~aal~~l-----g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~~~~~~--~~~~~~~l~~~ 384 (452)
T 2dgk_A 312 AQYYEFLRL-----GREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGED--PGYTLYDLSER 384 (452)
T ss_dssp HHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEECTTCC--CSCCHHHHHHH
T ss_pred HHHHHHHHH-----hHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCCeEEEEEEecCccc--ccCCHHHHHHH
Confidence 222222222 13445777888999999999999988 4877643 223344456654210 01123578888
Q ss_pred HHHhcCeEEcCCCCcC-CCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 285 LLNIAKINVTPGSACH-CIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 285 ll~~~gi~v~~g~~~~-~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
|. ++||.+....... .....++|++++. .|+++++++++.|++++++
T Consensus 385 L~-~~Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~~~~~ 433 (452)
T 2dgk_A 385 LR-LRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKY 433 (452)
T ss_dssp HH-HTTCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HH-hcCCeeeeeeCCcccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 54 5798654211110 1124589999985 5889999999999998765
No 182
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.95 E-value=2.2e-26 Score=213.52 Aligned_cols=307 Identities=13% Similarity=0.176 Sum_probs=213.3
Q ss_pred hhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcC--------CC-----C-eEEecCCCCCChhhhhhhccCc---E
Q 019899 3 GFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLAD--------HG-----N-ALLVPSPYYPGFDRDIRFRTGV---E 65 (334)
Q Consensus 3 ~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~--------~g-----d-~vl~~~p~~~~~~~~~~~~~g~---~ 65 (334)
+|+.+.++ .+.+.+++++|+|+|+++..++.++.. +| + +|+++.+.|+++...+. ..|. +
T Consensus 139 ~~la~~~g--~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~~-~~g~g~~~ 215 (504)
T 2okj_A 139 KKMREIVG--WSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGA-ALGFGTDN 215 (504)
T ss_dssp HHHHHHHT--CCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHH-HTTSCGGG
T ss_pred HHHHHHhC--CCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHHHH-HcCCCccc
Confidence 56666655 332267999999999999999888742 45 6 79999999999999888 7666 8
Q ss_pred EEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccC
Q 019899 66 LIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFG 145 (334)
Q Consensus 66 v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~ 145 (334)
++.+|++ +++.+|+++|++++++...++.++++|++++|+||||.+.+ +++|.++|+++|+++++|++|+.+.+.
T Consensus 216 v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~---l~~I~~la~~~g~~lhvD~a~~~~~~~ 290 (504)
T 2okj_A 216 VILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP---IQEIADICEKYNLWLHVDAAWGGGLLM 290 (504)
T ss_dssp EEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCC---HHHHHHHHHHHTCEEEEEETTGGGGGG
T ss_pred EEEEecC--CCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCCEEEEehhhhhHHHh
Confidence 9999973 56789999999999876666667999999999999999988 999999999999999999999987653
Q ss_pred CCCcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHH-hhccc-C------------------
Q 019899 146 NEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKK-LTRFC-S------------------ 205 (334)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~-~~~~~-~------------------ 205 (334)
...+...... . .+.++++.+++|+++.+ .++|+++++++++.+.... ...+. +
T Consensus 291 ~~~~~~~~~g-----~-~~~D~i~~~~hK~~~~p-~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 363 (504)
T 2okj_A 291 SRKHRHKLNG-----I-ERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQC 363 (504)
T ss_dssp CTTTGGGGTT-----G-GGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCS
T ss_pred CHhhHhhcCC-----c-ccCCEEEECchhhcCCC-cceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCCC
Confidence 3222111110 1 13346677999998744 6899999966656554321 11111 0
Q ss_pred ---CChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccC---CCceeEEeeecCCcCCC--CC--
Q 019899 206 ---ISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSE---SSAGLYCWADMSGLIPS--YS-- 274 (334)
Q Consensus 206 ---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~---~~~g~~~~~~~~~~~~~--~~-- 274 (334)
.+++.+.++..++. .+.+.++.++..++++++.+.|++. ++++.. +..++++|...|..... ..
T Consensus 364 ~rr~~~l~~~a~l~~lg-----~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~~~v~f~~~~~~~~~~~~~~~ 438 (504)
T 2okj_A 364 GRHVDIFKFWLMWKAKG-----TVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQ 438 (504)
T ss_dssp SCBCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHH
T ss_pred CCCccHHHHHHHHHHhh-----HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccccccccchh
Confidence 12344444433332 3445777888889999999999886 788764 66677665544432100 00
Q ss_pred -----hhhHHHHHHHHHHhcCe-EEcCCCCcCCCCCCeEEEEec-C-CCcccHHHHHHHHHHHHHH
Q 019899 275 -----EKGELELWDKLLNIAKI-NVTPGSACHCIEPGWFRCCFT-S-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 275 -----~~~~~~~~~~ll~~~gi-~v~~g~~~~~~~~~~iRi~~~-~-~~~~~l~~~l~~l~~~~~~ 332 (334)
.....++...|.+ .|+ .+.++. +. ...+++|++++ . .+++|++++++.|++++++
T Consensus 439 ~~~~~~~~~~~l~~~L~~-~G~~~~~~~~-~~-~~~~~lRis~~~~~~t~edi~~~~~~l~~~~~~ 501 (504)
T 2okj_A 439 RREKLHKVAPKIKALMME-SGTTMVGYQP-QG-DKANFFRMVISNPAATQSDIDFLIEEIERLGQD 501 (504)
T ss_dssp HHHHHTTHHHHHHHHHHH-HTSCEEEEEE-ET-TEEEEEEECCCCTTCCHHHHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHHHHHHHh-CCcEEEEeeE-EC-CceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 0012456677555 575 443222 21 11358999997 4 5899999999999998765
No 183
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.95 E-value=1.2e-27 Score=217.66 Aligned_cols=282 Identities=13% Similarity=0.070 Sum_probs=185.1
Q ss_pred CCCcEEEecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChhhhhhhccCcE-------------------EEEEeCCCC
Q 019899 16 DPSQIVLTAGATPAVEILCFCLA--DHGNALLVPSPYYPGFDRDIRFRTGVE-------------------LIPVHCRST 74 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~~g~~-------------------v~~v~~~~~ 74 (334)
+++++++++|+++++..++.... .++++|++.+|+|+++........|.. ++.++.
T Consensus 107 ~~~~v~~~~ggsea~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 183 (427)
T 3fq8_A 107 SIEMVRFVNSGTEACMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPY--- 183 (427)
T ss_dssp TCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEET---
T ss_pred CCCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCC---
Confidence 57899999999999999984331 345789999999987554333122221 233332
Q ss_pred CCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCC-HHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhh
Q 019899 75 DNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIP-RETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMA 153 (334)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~-~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~ 153 (334)
.|+++|++++++. ..++++|+++.++|++|.+.+ .+.+++|.++|++||++||+||+|.++ ..+... ..
T Consensus 184 ----~d~~~le~~l~~~---~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~-~~- 253 (427)
T 3fq8_A 184 ----NDLEAVKALFAEN---PGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYGG-VQ- 253 (427)
T ss_dssp ----TCHHHHHHHHHHS---TTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTTH-HH-
T ss_pred ----CCHHHHHHHHHhC---CCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcch-hh-
Confidence 1789999998762 225676666666778888776 455999999999999999999999987 444321 11
Q ss_pred hhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh-----hcccCCChHHHHHHHHhhCChHHHHHHH
Q 019899 154 EILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL-----TRFCSISAPTQRLLISMLSDTKFIQEYL 228 (334)
Q Consensus 154 ~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 228 (334)
.. .+....+.|+||+++ +|+|+||+++ ++++++.+... ...++.+++.+.++.++++..+.
T Consensus 254 ~~-------~~~~~di~t~sK~~~-~G~~~G~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~----- 319 (427)
T 3fq8_A 254 EK-------FGVTPDLTTLGKIIG-GGLPVGAYGG-KREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQ----- 319 (427)
T ss_dssp HH-------TTCCCSEEEECGGGG-TTSSCEEEEE-CHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS-----
T ss_pred Hh-------cCCCCChhhhhhhhh-CCcceEEEEE-cHHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHh-----
Confidence 11 111122468999999 8999999998 88988887642 33456688888887777642210
Q ss_pred HHHHHHHHHHHHHHHHHHHh----CCCcccCCCceeEEeeecCCcCCC-------CChhhHHHHHHHHHHhcCeEEcCCC
Q 019899 229 ETNKRRIKKLYDSFVAGLKQ----LGIRCSESSAGLYCWADMSGLIPS-------YSEKGELELWDKLLNIAKINVTPGS 297 (334)
Q Consensus 229 ~~~~~~~~~~~~~~~~~l~~----~g~~~~~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~ll~~~gi~v~~g~ 297 (334)
+...++++++.+++.+.|++ .++....+..|.++|++++..... .......++...|++ +||.+.|+.
T Consensus 320 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~Gi~v~~~~ 398 (427)
T 3fq8_A 320 PGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLE-QGIYLAPSQ 398 (427)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHH-TTEECCSST
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeeeEEEEEEecCccccccccccccHHHHHHHHHHHHH-CCcEEecCC
Confidence 12233344444444444433 344333344567788888653111 112234567777554 799999865
Q ss_pred CcCCCCCCeEEEEecCCCcccHHHHHHHHHHHHHH
Q 019899 298 ACHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 298 ~~~~~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
. .++|+++. .+++++++++++|++++++
T Consensus 399 ~------~r~~~~~~-~t~e~i~~~l~~l~~~l~~ 426 (427)
T 3fq8_A 399 F------EAGFTSLA-HTEEDIDATLAAARTVMSA 426 (427)
T ss_dssp T------SCEECCTT-CCHHHHHHHHHHHHHHHHH
T ss_pred C------CCEEeeCc-CCHHHHHHHHHHHHHHHHh
Confidence 3 23454443 6999999999999999875
No 184
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.95 E-value=8.6e-28 Score=219.32 Aligned_cols=280 Identities=13% Similarity=0.067 Sum_probs=188.4
Q ss_pred hhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCC----ccc
Q 019899 4 FMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDN----FAF 79 (334)
Q Consensus 4 ~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~----~~~ 79 (334)
-+++.+++ ++.+ +++++++|+++++.+++.+++++||+|+++.|+|.++...+. ..|.+++.++...+++ +.+
T Consensus 61 ~~~~~la~-~g~~-~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~-~~G~~~~~v~~~~~~~~~~~~~~ 137 (446)
T 2x3l_A 61 KSMKQVEK-HSDY-DGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALD-ISQQEGHFIETHQSPLTNHYNKV 137 (446)
T ss_dssp HHHHHHCS-CTTE-EEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHH-HHTCCEEECEEEECTTTSSEEEE
T ss_pred HHHHHHHh-cCCC-ceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHH-HcCCeEEEEeCeeccccCcCCCC
Confidence 35566677 7665 689999999999999999999999999999999999999998 8899999998732222 567
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccc-cccCCCCcchhhhhhhc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGG-SIFGNEEFVSMAEILEA 158 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~-~~~~~~~~~~~~~~~~~ 158 (334)
|++++ +.+ +++++++++ .|++|.+.+ +++|.++|+++|+++|+|++|+. +.|.+. ..+...
T Consensus 138 d~~~l---~~~------~~~~v~~~~-~n~~G~~~~---l~~I~~l~~~~~~~livDea~~~~~~f~~~-~~~~~~---- 199 (446)
T 2x3l_A 138 NLSRL---NND------GHKLVVLTY-PNYYGETFN---VEEVIKSLHQLNIPVLIDEAHGAHFGLQGF-PDSTLN---- 199 (446)
T ss_dssp EC----------------CCEEEEES-SCTTSCCCC---HHHHHHHHHHTTCCEEEECTTCTTTTSTTS-CCCGGG----
T ss_pred CHHHH---cCC------CceEEEEEC-CCCCeEecC---HHHHHHHHHhcCCeEEEcchhhhhhccCCC-CCChHH----
Confidence 88877 333 789999998 556999999 89999999999999999999986 334333 222222
Q ss_pred cccCCCcEEEEecccccCCCCCceEEEEeecCHHHHH--HHHHhhc---ccCCChHHHHHHHHhhCChHHHHHH-HHHHH
Q 019899 159 EEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLA--AAKKLTR---FCSISAPTQRLLISMLSDTKFIQEY-LETNK 232 (334)
Q Consensus 159 ~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~ 232 (334)
.+.++++.|+||+++ ++.+.||+++++ ++.+ .+..... ..+.+.....++..++. +++.. ..+..
T Consensus 200 ----~g~Di~~~S~~K~l~-~~~g~g~l~~~~-~~i~~~~~~~~~~~~~~~s~~~~~~aal~~a~~---~l~~~g~~~~~ 270 (446)
T 2x3l_A 200 ----YQADYVVQSFHKTLP-ALTMGSVLYIHK-NAPYRENIIEYLSYFQTSSPSYLIMASLESAAQ---FYKTYDSTLFF 270 (446)
T ss_dssp ----GTCSEEEECHHHHSS-SCTTCEEEEEET-TCTTHHHHHHHHHHHSCSSCCHHHHHHHHHHHH---HHHHCCCHHHH
T ss_pred ----cCCCEEEECCccccc-cccccEEEEEcC-CcCCHHHHHHHHHHHcCCCchHHHHHHHHHHHH---HHHHhCHHHHH
Confidence 233488899999764 334579999844 3322 3332211 22333333333333221 12221 11134
Q ss_pred HHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEc-CCCCcCCCCCCeEEEEe
Q 019899 233 RRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVT-PGSACHCIEPGWFRCCF 311 (334)
Q Consensus 233 ~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~-~g~~~~~~~~~~iRi~~ 311 (334)
++..++.+++.+. ++++..+.++.++|+.++. . ++.++.+.|.+ +||.+. +|. +++|+++
T Consensus 271 ~~~~~l~~~l~~~----g~~~~~~~~~~~l~i~~~~-~------~~~~l~~~L~~-~GI~v~~~g~-------~~iRi~~ 331 (446)
T 2x3l_A 271 AKRAQLIECLENK----GFEMLQVDDPLKLLIKYEG-F------TGHDIQNWFMN-AHIYLELADD-------YQALAIL 331 (446)
T ss_dssp HHHHHHHHHHHHH----TCEEEECSSTTEEEEECTT-S------CHHHHHHHHHH-TTEEESEECS-------SCEEEEC
T ss_pred HHHHHHHHHHHHc----CCEECcCCCCeEEEEEeCC-c------CHHHHHHHHHH-CCCEEEecCC-------CEEEEEe
Confidence 4444445555544 7777655555568888862 1 34577887555 599987 432 5799999
Q ss_pred cC-CCcccHHHHHHHHHHHHHHc
Q 019899 312 TS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 312 ~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
+. .+++++ +++++|+++++++
T Consensus 332 ~~~~t~e~i-~l~~aL~~~~~~~ 353 (446)
T 2x3l_A 332 PLWHHDDTY-LFDSLLRKIEDMI 353 (446)
T ss_dssp CCCCTTCCC-CHHHHHHHHHTCC
T ss_pred ecCCCHHHH-HHHHHHHHHHHhh
Confidence 85 588999 9999999987653
No 185
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.95 E-value=5.9e-27 Score=209.34 Aligned_cols=284 Identities=10% Similarity=0.044 Sum_probs=199.7
Q ss_pred hhhhcCCCCCCCCcEEEecCcHHHHHHHHHHh---cCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHH
Q 019899 6 SQVLGQAVSFDPSQIVLTAGATPAVEILCFCL---ADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSIT 82 (334)
Q Consensus 6 ~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l---~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~ 82 (334)
++.+++.++.+ ++++++|+++++..++.++ .++||+|+++.|+|+++...+. ..|.+++.+++++ + ..+|++
T Consensus 38 ~~~la~~~~~~--~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~-~~~d~~ 112 (375)
T 2fnu_A 38 EEALCEFLGVK--HALVFNSATSALLTLYRNFSEFSADRNEIITTPISFVATANMLL-ESGYTPVFAGIKN-D-GNIDEL 112 (375)
T ss_dssp HHHHHHHHTCS--EEEEESCHHHHHHHHHHHSSCCCTTSCEEEECSSSCTHHHHHHH-HTTCEEEECCBCT-T-SSBCGG
T ss_pred HHHHHHHhCCC--eEEEeCCHHHHHHHHHHHhcccCCCCCEEEECCCccHhHHHHHH-HCCCEEEEeccCC-C-CCCCHH
Confidence 33344334433 8999999999999999999 8899999999999999999988 8999999999853 2 378999
Q ss_pred HHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccC
Q 019899 83 ALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVD 162 (334)
Q Consensus 83 ~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (334)
++++++++ ++++|++++| ||.+.+ +++|.++|+++|+++|+|++|+.+.... ...+..
T Consensus 113 ~l~~~i~~------~~~~v~~~~~---tG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~~-----~~~~~~----- 170 (375)
T 2fnu_A 113 ALEKLINE------RTKAIVSVDY---AGKSVE---VESVQKLCKKHSLSFLSDSSHALGSEYQ-----NKKVGG----- 170 (375)
T ss_dssp GSGGGCCT------TEEEEEEECG---GGCCCC---HHHHHHHHHHHTCEEEEECTTCTTCEET-----TEETTS-----
T ss_pred HHHhhcCc------CceEEEEeCC---cCCccC---HHHHHHHHHHcCCEEEEECccccCCeEC-----Ceeccc-----
Confidence 99988865 7888888866 999999 8999999999999999999998643211 011111
Q ss_pred CCcEEEEeccc--ccCCCCCceEEEEee-cCHHHHHHHHHhhccc------------------CCChHHHHHHHHhhCCh
Q 019899 163 KDRVHIIYGLS--KDLSLPGFRTGVIYS-YNESVLAAAKKLTRFC------------------SISAPTQRLLISMLSDT 221 (334)
Q Consensus 163 ~~~~~~~~s~s--K~~~~~g~r~g~i~~-~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~l~~~ 221 (334)
.+ ++.+.|+| |.++. | +|++++ +++++.+.++...... ..+.....+....
T Consensus 171 ~~-~i~~~s~s~~K~~~~-g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~---- 242 (375)
T 2fnu_A 171 FA-LASVFSFHAIKPITT-A--EGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLSQ---- 242 (375)
T ss_dssp SS-SEEEEECCTTSSSCC-S--SCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHHHH----
T ss_pred cC-CeEEEeCCCCCCccc-c--CceEEEeCCHHHHHHHHHHHhcCCccccccccccccccccCCCCHHHHHHHHHH----
Confidence 22 36677777 99974 6 567666 4588888776543211 1222222211111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCC-----CceeEEeeecCCcCCCCChh-hHHHHHHHHHHhcCeEEc
Q 019899 222 KFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSES-----SAGLYCWADMSGLIPSYSEK-GELELWDKLLNIAKINVT 294 (334)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~-----~~g~~~~~~~~~~~~~~~~~-~~~~~~~~ll~~~gi~v~ 294 (334)
.+++.+..++.+++++++.+.|+++ ++++..+ ..++++|+.++.. .. +..++...| .++||.+.
T Consensus 243 ---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~L-~~~gi~v~ 313 (375)
T 2fnu_A 243 ---LKKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQK-----FFTCKKLILESL-HKRGILAQ 313 (375)
T ss_dssp ---HTTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGG-----GGGGHHHHHHHH-HHTTEECB
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCcc-----ccchHHHHHHHH-HHCCCCcc
Confidence 1223556677888899999999887 6776544 1234556777632 01 346778885 56899988
Q ss_pred CCCC-------cC-------CC-----CCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 295 PGSA-------CH-------CI-----EPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 295 ~g~~-------~~-------~~-----~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
+... ++ .. .++++|++++. .++++++++++.|++++++.
T Consensus 314 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~ 372 (375)
T 2fnu_A 314 VHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFESF 372 (375)
T ss_dssp CCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 3211 10 00 12679999985 58999999999999998765
No 186
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.95 E-value=1e-26 Score=212.65 Aligned_cols=280 Identities=13% Similarity=0.016 Sum_probs=192.2
Q ss_pred EEE-ecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhh-h--hhhc--cCcEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 20 IVL-TAGATPAVEILCFCLADHGNALLVPSPYYPGFDR-D--IRFR--TGVELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 20 i~~-~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~-~--~~~~--~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
+.+ ++++++++..++.+++++||+|+++.|+|.++.. . .. . .+..++.+++++ +++.+|++++++++++.
T Consensus 109 ~~v~~~sGs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~-- 184 (447)
T 3h7f_A 109 ANVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGMRLN-FSGKLYENGFYGVDP-ATHLIDMDAVRATALEF-- 184 (447)
T ss_dssp EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTS-HHHHSSEEEEECCCT-TTCSCCHHHHHHHHHHH--
T ss_pred eEEEeCCHHHHHHHHHHHhcCCCCEEEecCcccccccchhhhhh-hcCCeeEEEEcCcCc-ccCCcCHHHHHHHHHhc--
Confidence 444 7788999999999999999999999999987322 1 12 2 234566666643 44689999999999764
Q ss_pred cCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccc-cccCCCCcchhhhhhhccccCCCcEEEEecc
Q 019899 94 RGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGG-SIFGNEEFVSMAEILEAEEVDKDRVHIIYGL 172 (334)
Q Consensus 94 ~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 172 (334)
+++++++++|+||++. + +++|.++|+++|+++|+|++|.. +.+.+.....+ ...++++.|+
T Consensus 185 ---~~~~i~~~~~~~~~~~--~---l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~----------~~~di~~~s~ 246 (447)
T 3h7f_A 185 ---RPKVIIAGWSAYPRVL--D---FAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPV----------PHADVVSTTV 246 (447)
T ss_dssp ---CCSEEEEECSSCCSCC--C---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST----------TTCSEEEEES
T ss_pred ---CCeEEEEcCCCCCCcc--C---HHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCC----------CCCcEEEecC
Confidence 7888888899998876 5 99999999999999999999743 33332211111 1234778999
Q ss_pred cccCCCCCceEEEEeecCHHHHHHHHHhhccc---CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 019899 173 SKDLSLPGFRTGVIYSYNESVLAAAKKLTRFC---SISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL 249 (334)
Q Consensus 173 sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 249 (334)
||++ +|.|.||+++ ++++.+.+......+ +.+...+.++..++... .++.+.++.+++.++++++.+.|++.
T Consensus 247 sK~l--~G~~gG~i~~-~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~ 321 (447)
T 3h7f_A 247 HKTL--GGGRSGLIVG-KQQYAKAINSAVFPGQQGGPLMHVIAGKAVALKIA--ATPEFADRQRRTLSGARIIADRLMAP 321 (447)
T ss_dssp SGGG--CCCSCEEEEE-CGGGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHT--TSHHHHHHHHHHHHHHHHHHHHHTSH
T ss_pred CcCC--CCCCeEEEEE-CHHHHHHHhhhcCCcccCCccHHHHHHHHHHHHHh--hCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9988 4678899998 778888776653332 22233344444433221 12234677788889999999999887
Q ss_pred -----CCcccC-CCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEc----CCCCcCCCCCCeEEEEecC-----C
Q 019899 250 -----GIRCSE-SSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVT----PGSACHCIEPGWFRCCFTS-----L 314 (334)
Q Consensus 250 -----g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~----~g~~~~~~~~~~iRi~~~~-----~ 314 (334)
|+++.. +..++++|+++..... + .+.+..+++++||.+. |+...++..++++|+++.. .
T Consensus 322 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~ 395 (447)
T 3h7f_A 322 DVAKAGVSVVSGGTDVHLVLVDLRDSPL-----D-GQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGF 395 (447)
T ss_dssp HHHHTTCEEGGGSCSSSEEEEECTTSSC-----C-HHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTC
T ss_pred cccCCCeEEecCCCCCCEEEEEcCCCCC-----C-HHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCC
Confidence 888764 3456677888754311 1 3455556787899998 5532333346789999753 5
Q ss_pred CcccHHHHHHHHHHHHHH
Q 019899 315 THEDIPLVIERIQKVAET 332 (334)
Q Consensus 315 ~~~~l~~~l~~l~~~~~~ 332 (334)
++++++++++.|.+++++
T Consensus 396 ~~eei~~~~~~l~~~l~~ 413 (447)
T 3h7f_A 396 GDTEFTEVADIIATALAT 413 (447)
T ss_dssp CHHHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHHhc
Confidence 789999999999998864
No 187
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.95 E-value=4e-27 Score=212.31 Aligned_cols=280 Identities=13% Similarity=0.087 Sum_probs=192.2
Q ss_pred hhhhhcCCCCCC-CCcEEE-ecCcHHHHHHHHHHhcCCCCeEEecCCCCCCh-hhhhhhcc--CcEEEEEeCCCCCCccc
Q 019899 5 MSQVLGQAVSFD-PSQIVL-TAGATPAVEILCFCLADHGNALLVPSPYYPGF-DRDIRFRT--GVELIPVHCRSTDNFAF 79 (334)
Q Consensus 5 ~~~~~~~~~~~~-~~~i~~-~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~-~~~~~~~~--g~~v~~v~~~~~~~~~~ 79 (334)
+++.+++.++++ +++|++ |+|+++++.+++.+++++| .+++..+.|... ..... .. |.+++.++++ +++..
T Consensus 83 ~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~l~~~g-v~~v~~~~~~~~~~~~~~-~~~~g~~~~~v~~~--~g~~~ 158 (398)
T 2fyf_A 83 VRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLIDKR-SLHLTYGEFSAKFASAVS-KNPFVGEPIIITSD--PGSAP 158 (398)
T ss_dssp HHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHTCSSC-EEEEECSHHHHHHHHHHH-HCTTSCCCEEEECC--TTCCC
T ss_pred HHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHHhcCCC-eEEEeCCHHHHHHHHHHH-HhCCCCceEEEecC--CCCCC
Confidence 334444445555 468998 9999999999999998887 233333333211 11233 44 7888888874 33333
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
+.+ ++ .++++|++++|+||||.++|.+++.++ +|++||+|++|+.+... ..+
T Consensus 159 ~~~-----i~------~~~~~v~~~~~~nptG~~~~~~~i~~~------~~~~vivD~a~~~~~~~----~~~------- 210 (398)
T 2fyf_A 159 EPQ-----TD------PSVDVIAWAHNETSTGVAVAVRRPEGS------DDALVVIDATSGAGGLP----VDI------- 210 (398)
T ss_dssp CCC-----CC------TTCSEEEEESEETTTTEECCCCCCTTC------C-CEEEEECTTTTTTSC----CCG-------
T ss_pred Ccc-----cc------CCCCEEEEeCcCCCcceecchHHhhhh------cCCeEEEEeccccCCcc----cCc-------
Confidence 321 22 278999999999999999995555443 89999999999864321 111
Q ss_pred ccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh-----------------------hcccCCChHHHHHHHH
Q 019899 160 EVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL-----------------------TRFCSISAPTQRLLIS 216 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~ 216 (334)
.+.++++.|+||++|++| ++||+++ ++++++.++.. ...++.+...+.++..
T Consensus 211 ---~~~di~~~s~sK~~~~~g-g~g~l~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~ 285 (398)
T 2fyf_A 211 ---AETDAYYFAPQKNFASDG-GLWLAIM-SPAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAE 285 (398)
T ss_dssp ---GGCSEEEECTTSTTCSCS-SEEEEEE-CHHHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHH
T ss_pred ---ccCcEEEEecCcccCCCC-ceEEEEE-CHHHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHH
Confidence 123478889999998665 6999998 78887776431 1123455566666666
Q ss_pred hhCChHHHHHH--HHHHHHHHHHHHHHHHHHHHhC-CCcccC--C--CceeEEeeecCCcCCCCChhhHHHHHHHHHHhc
Q 019899 217 MLSDTKFIQEY--LETNKRRIKKLYDSFVAGLKQL-GIRCSE--S--SAGLYCWADMSGLIPSYSEKGELELWDKLLNIA 289 (334)
Q Consensus 217 ~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~-g~~~~~--~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 289 (334)
+++. +.+. +.+.+++++++++++.+.|+++ |+++.. + .+++++|+++|... +..++.+.|.+ +
T Consensus 286 al~~---~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~L~~-~ 355 (398)
T 2fyf_A 286 QIDW---LVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVDDV------DAGTVAKILRA-N 355 (398)
T ss_dssp HHHH---HHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEESCCSGGGBCSSEEEEEECTTS------CHHHHHHHHHH-T
T ss_pred HHHH---HHHccCHHHHHHHHHHHHHHHHHHHHHcCCceeccCChhhcCCcEEEEECCCCC------CHHHHHHHHHH-C
Confidence 6542 2222 5778888999999999999988 777663 3 34558888887532 34678888555 6
Q ss_pred CeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 290 KINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 290 gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
||.+.+|.. ...++++|++++. .+++|+++++++|+++++++
T Consensus 356 gI~v~~g~~--~~~~~~iRis~~~~~t~e~i~~~~~~l~~~l~~~ 398 (398)
T 2fyf_A 356 GIVDTEPYR--KLGRNQLRVAMFPAVEPDDVSALTECVDWVVERL 398 (398)
T ss_dssp TCBCCSCCT--TTCSSEEEEECCTTSCHHHHHHHHHHHHHHHHTC
T ss_pred CcEEecCcc--cCCCCEEEEEecCCCCHHHHHHHHHHHHHHHHhC
Confidence 999988732 1235789999985 59999999999999998753
No 188
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.95 E-value=1.2e-26 Score=207.38 Aligned_cols=286 Identities=14% Similarity=0.150 Sum_probs=198.4
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHh-cCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCL-ADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITA 83 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l-~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~ 83 (334)
+++.+++.++. +++++++|+++++..++.++ .++||+|+++.|+|+++...++ ..|.+++.++++ +++.+|+++
T Consensus 43 l~~~la~~~~~--~~~~~~~~gt~a~~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~-~~g~~~~~~~~~--~~~~~d~~~ 117 (374)
T 3uwc_A 43 FEKRFAALHNA--PHAIGVGTGTDALAMSFKMLNIGAGDEVITCANTFIASVGAIV-QAGATPVLVDSE--NGYVIDPEK 117 (374)
T ss_dssp HHHHHHHHTTC--SEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHHHHHHH-HTTCEEEEECBC--TTSSBCGGG
T ss_pred HHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHHHHHHH-HcCCEEEEEecC--CCCCcCHHH
Confidence 34444444443 38999999999999999999 9999999999999999999988 899999999984 567889999
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccc-cCCCCcchhhhhhhccccC
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSI-FGNEEFVSMAEILEAEEVD 162 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~-~~~~~~~~~~~~~~~~~~~ 162 (334)
+++++++ ++++++ |+||||.+.+ +++|.++|+++|+++|+|++|+.+. +.+. ...
T Consensus 118 l~~~~~~------~~~~v~---~~n~~G~~~~---~~~i~~~~~~~~~~li~D~~~~~g~~~~~~------~~~------ 173 (374)
T 3uwc_A 118 IEAAITD------KTKAIM---PVHYTGNIAD---MPALAKIAKKHNLHIVEDACQTILGRINDK------FVG------ 173 (374)
T ss_dssp TGGGCCT------TEEEEC---CBCGGGCCCC---HHHHHHHHHHTTCEEEEECTTCTTCEETTE------ETT------
T ss_pred HHHhCCC------CceEEE---EeCCcCCcCC---HHHHHHHHHHcCCEEEEeCCCccCceeCCe------ecc------
Confidence 9998875 778666 8899999998 9999999999999999999998643 2111 111
Q ss_pred CCcEEEEeccc--ccCCCCCceEEEEeecCHHHHHHHHHhhccc--------------CCChHHHHHHHHhhCChHHHHH
Q 019899 163 KDRVHIIYGLS--KDLSLPGFRTGVIYSYNESVLAAAKKLTRFC--------------SISAPTQRLLISMLSDTKFIQE 226 (334)
Q Consensus 163 ~~~~~~~~s~s--K~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~l~~~~~~~~ 226 (334)
...++++.|+| |.++.+|. .|+++++++++.+.++...... ..+..........+ +
T Consensus 174 ~~~d~~~~s~~~~K~l~~~g~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~~---~---- 245 (374)
T 3uwc_A 174 SWGQFACFSLHPLKNLNVWSD-AGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIANRLM---N---- 245 (374)
T ss_dssp SSSSEEEEECSSSSSSCCSSC-CEEEEESCHHHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHHHHHG---G----
T ss_pred ccccEEEEeCCCCCcCCccce-eEEEEeCCHHHHHHHHHHHhcCccccCccccccccCCCCHHHHHHHHHHH---H----
Confidence 11356777866 99974465 8888887888888877654211 11222222211111 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCC--CcccC-CCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcC---
Q 019899 227 YLETNKRRIKKLYDSFVAGLKQLG--IRCSE-SSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACH--- 300 (334)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~l~~~g--~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~--- 300 (334)
.+.+..++.+++.+++.+.|++.+ +++.. +.++...|..++-.. .+..++... +.++||.+.++....
T Consensus 246 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~-L~~~gi~v~~~~~~~~~~ 319 (374)
T 3uwc_A 246 QLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVFHIYVLRV-----KYRDQLFQY-LKDNGIEVKIHYPIAMHL 319 (374)
T ss_dssp GHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCCSSEEEEE-----TTHHHHHHH-HHHTTBCCBCSCSSCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCceeeEEEEEEc-----CCHHHHHHH-HHHCCCccccCCCCcccc
Confidence 124455666677788888888874 55542 222222222211110 124567777 555799998875110
Q ss_pred -C-------C----------CCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 301 -C-------I----------EPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 301 -~-------~----------~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
+ . ..+.+|++++. .+++|++++++.|++++++.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l~~~ 371 (374)
T 3uwc_A 320 QPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVREFYLEK 371 (374)
T ss_dssp SGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred ChhhhhcCCccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHhh
Confidence 0 0 01579999885 69999999999999999764
No 189
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.95 E-value=8.2e-26 Score=204.53 Aligned_cols=262 Identities=18% Similarity=0.169 Sum_probs=182.8
Q ss_pred CcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhh----hhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 18 SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDI----RFRTGVELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
+++++++|+++|+..++.+++++||+|+++.|+|++....+ + ..|.+++.++. |++++++++++
T Consensus 72 ~~~~~~~~gt~a~~~al~~l~~~gd~vi~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~--------~~~~l~~~i~~--- 139 (412)
T 2cb1_A 72 LEAVVLASGQAATFAALLALLRPGDEVVAAKGLFGQTIGLFGQVLS-LMGVTVRYVDP--------EPEAVREALSA--- 139 (412)
T ss_dssp SEEEEESSHHHHHHHHHHTTCCTTCEEEEETTCCHHHHHHHHHTTT-TTTCEEEEECS--------SHHHHHHHCCT---
T ss_pred CcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHH-HcCCEEEEECC--------CHHHHHHHhcc---
Confidence 48999999999999999999999999999999998766653 3 57999999985 38888888875
Q ss_pred cCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEeccc
Q 019899 94 RGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLS 173 (334)
Q Consensus 94 ~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s 173 (334)
++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+.+.+.. .+. . .+.++++.|+|
T Consensus 140 ---~~~~v~~~~~~n~~G~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~~---~~~----~-----~~~di~~~S~~ 201 (412)
T 2cb1_A 140 ---KTRAVFVETVANPALLVPD---LEALATLAEEAGVALVVDNTFGAAGALC---RPL----A-----WGAHVVVESLT 201 (412)
T ss_dssp ---TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGTTTTSC---CGG----G-----GTCSEEEEETT
T ss_pred ---CCeEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEECCCccccccC---Ccc----c-----cCCeEEEECCc
Confidence 7899999999999999998 9999999999999999999998752211 111 1 46778999999
Q ss_pred ccCCCCCceEEEEeecC-H--------------------------HHHHHHHHhh-ccc--CCChHHHHHHHHhhCChHH
Q 019899 174 KDLSLPGFRTGVIYSYN-E--------------------------SVLAAAKKLT-RFC--SISAPTQRLLISMLSDTKF 223 (334)
Q Consensus 174 K~~~~~g~r~g~i~~~~-~--------------------------~~~~~~~~~~-~~~--~~~~~~~~~~~~~l~~~~~ 223 (334)
|+++.+|.|+|++++.+ . ++.+.++... ... ..++.........++.
T Consensus 202 K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~--- 278 (412)
T 2cb1_A 202 KWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTLGLSLCGMALSPFNAYLLFQGLET--- 278 (412)
T ss_dssp TTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGGG---
T ss_pred ccccCCCCcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCch---
Confidence 99987999999988644 2 3444554432 212 2233333333323322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC-CCccc-CC----------------CceeEEeeecCCcCCCCChhhHHHHHHHH
Q 019899 224 IQEYLETNKRRIKKLYDSFVAGLKQL-GIRCS-ES----------------SAGLYCWADMSGLIPSYSEKGELELWDKL 285 (334)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~-~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (334)
+ ..+.++..++.+++.+.|.+. ++... .| ..+.++.+.+ . + .+....+
T Consensus 279 l----~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~~~-~--~-------~~~~~~~ 344 (412)
T 2cb1_A 279 V----ALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPILTLDL-G--D-------LERASRF 344 (412)
T ss_dssp H----HHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEEEEC-S--S-------HHHHHHH
T ss_pred H----HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEe-C--C-------HHHHHHH
Confidence 1 233444567788888888876 66533 11 1233455666 3 1 2344455
Q ss_pred HHhcCeEEcCCC---------CcCCC---------------CCCeEEEEecC-CCcccHHHHHHHHH
Q 019899 286 LNIAKINVTPGS---------ACHCI---------------EPGWFRCCFTS-LTHEDIPLVIERIQ 327 (334)
Q Consensus 286 l~~~gi~v~~g~---------~~~~~---------------~~~~iRi~~~~-~~~~~l~~~l~~l~ 327 (334)
+++.||.+ .++ .+... .++.+|+|++. .++++++.+.+.|+
T Consensus 345 l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~~~~~~~i~~l~~al~ 410 (412)
T 2cb1_A 345 LGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDPLDLLALFEEALE 410 (412)
T ss_dssp HHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHH
T ss_pred HHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHh
Confidence 77789998 764 22110 15789999994 35666666666664
No 190
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.95 E-value=2.5e-26 Score=207.86 Aligned_cols=266 Identities=15% Similarity=0.145 Sum_probs=184.7
Q ss_pred CcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhh----hhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 18 SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDR----DIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
+..++++++++|+..++.+++++||+|+++.|+|+++.. .+. ..|.+++.++.. |++++++++++
T Consensus 98 ~~~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~-~~G~~~~~v~~~-------d~~~l~~ai~~--- 166 (430)
T 3ri6_A 98 LGVLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLP-SFGIEVRFVDVM-------DSLAVEHACDE--- 166 (430)
T ss_dssp SEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHH-HTTCEEEEECTT-------CHHHHHHHCCT---
T ss_pred CcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHH-HcCCEEEEeCCC-------CHHHHHHhhCC---
Confidence 446777788899999999999999999999999998887 455 689999999862 78999999876
Q ss_pred cCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEeccc
Q 019899 94 RGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLS 173 (334)
Q Consensus 94 ~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s 173 (334)
++++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|+...+ ... .. .+.++++.|+|
T Consensus 167 ---~t~~v~~e~p~NptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~-----~~~---~~-----~g~div~~S~s 227 (430)
T 3ri6_A 167 ---TTKLLFLETISNPQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYL-----LEA---KR-----LGVDIEVLSST 227 (430)
T ss_dssp ---TEEEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTT-----CCG---GG-----GTCSEEEEECC
T ss_pred ---CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc-----CCh---HH-----cCCEEEEECCc
Confidence 8999999999999999999 88999999999999999999975332 111 11 45678999999
Q ss_pred ccCCCCCceEEEEee--cCHHH------------------HHHHHH-hhcccC--CChHHHHHHHHhhCChHHHHHHHHH
Q 019899 174 KDLSLPGFRTGVIYS--YNESV------------------LAAAKK-LTRFCS--ISAPTQRLLISMLSDTKFIQEYLET 230 (334)
Q Consensus 174 K~~~~~g~r~g~i~~--~~~~~------------------~~~~~~-~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~ 230 (334)
|.++.+|..+|.+++ .+..+ ++.++. ....++ .++..... .+.. .+.+..
T Consensus 228 K~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~~a~l---~l~~----l~~l~~ 300 (430)
T 3ri6_A 228 KFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPHNAYL---QSLG----LETMAL 300 (430)
T ss_dssp CEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHH---HHHH----HHHHHH
T ss_pred ccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHH---HHhh----hhhHHH
Confidence 999766654554444 23111 222221 111222 23222221 1111 222344
Q ss_pred HHHHHHHHHHHHHHHHHhC-CCcc-cCCC----------------ceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeE
Q 019899 231 NKRRIKKLYDSFVAGLKQL-GIRC-SESS----------------AGLYCWADMSGLIPSYSEKGELELWDKLLNIAKIN 292 (334)
Q Consensus 231 ~~~~~~~~~~~~~~~l~~~-g~~~-~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~ 292 (334)
+.++..+++..+.+.|++. +++. ..|. +|+++|++++.. .+...+.+. ++..++.
T Consensus 301 r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~~------~~~~~~~~~-l~~~~~~ 373 (430)
T 3ri6_A 301 RIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELESK------EASYRFMDA-LKLIRRA 373 (430)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSSH------HHHHHHHHH-CSSSEEC
T ss_pred HHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCH------HHHHHHHHh-CCcceec
Confidence 5566778888899998876 4442 2222 555888998731 234455555 4546667
Q ss_pred EcCCCCcCC---------------------CCCCeEEEEecCCCcccHHHHHHHHHHHH
Q 019899 293 VTPGSACHC---------------------IEPGWFRCCFTSLTHEDIPLVIERIQKVA 330 (334)
Q Consensus 293 v~~g~~~~~---------------------~~~~~iRi~~~~~~~~~l~~~l~~l~~~~ 330 (334)
+.+|..+.. ..++.+|+|++ .|+.+++++.|++++
T Consensus 374 ~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG---~E~~~dl~~dl~~al 429 (430)
T 3ri6_A 374 TNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVG---IEEIEDLKEDILQAL 429 (430)
T ss_dssp SCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECC---SSCHHHHHHHHHHHH
T ss_pred CCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEec---cCCHHHHHHHHHHhh
Confidence 777775542 13578999998 788888888888876
No 191
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.95 E-value=2.8e-26 Score=212.00 Aligned_cols=287 Identities=17% Similarity=0.160 Sum_probs=199.5
Q ss_pred CcEEEecCcHHHHHHHHHHhcCC---------CC--------e--EEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcc
Q 019899 18 SQIVLTAGATPAVEILCFCLADH---------GN--------A--LLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFA 78 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l~~~---------gd--------~--vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~ 78 (334)
.++++|+|+|+|+..++.++..+ || + |+++.++|+++...++ ..|.+++.+|+ ++++.
T Consensus 140 ~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~-~~G~~v~~v~~--d~~~~ 216 (486)
T 1js3_A 140 GGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGL-IGGVKLKAIPS--DGKFA 216 (486)
T ss_dssp CEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHH-HHTCEEEEECC--CTTSC
T ss_pred CCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCEEEEECCCCcHHHHHHHH-hCCCceEEeec--CCCCC
Confidence 46899999999999888775321 42 3 7889999999999998 88999999998 35778
Q ss_pred ccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchh-hhhhh
Q 019899 79 FSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSM-AEILE 157 (334)
Q Consensus 79 ~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~-~~~~~ 157 (334)
+|+++|+++|++....+..+.+|++++|+||||.+.+ +++|.++|++||+++++|++|+.+.+..+..... ..+
T Consensus 217 ~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~---l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~-- 291 (486)
T 1js3_A 217 MRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDN---LLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGV-- 291 (486)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTG--
T ss_pred CCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCC---HHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCc--
Confidence 9999999999875444545678999999999999988 9999999999999999999998765432222221 111
Q ss_pred ccccCCCcEEEEecccccCCCCCceEEEEeecCHHH-HHHHHHhhcc----------------c------CCChHHHHHH
Q 019899 158 AEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESV-LAAAKKLTRF----------------C------SISAPTQRLL 214 (334)
Q Consensus 158 ~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~-~~~~~~~~~~----------------~------~~~~~~~~~~ 214 (334)
.+.+.++.++||+++.+ .++|+++++++.. .+.+.....+ + ....+.+.++
T Consensus 292 -----~~adsi~~~~hK~~~~p-~~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~a 365 (486)
T 1js3_A 292 -----EFADSFNFNPHKWLLVN-FDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFV 365 (486)
T ss_dssp -----GGCSEEEECHHHHSSCC-SSCEEEEESCHHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHH
T ss_pred -----cccCeeEEchhhhcCCC-cceEEEEEeCHHHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHH
Confidence 12235567899999754 7899999977764 3333110000 0 0112333333
Q ss_pred HHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccC-CCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeE
Q 019899 215 ISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSE-SSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKIN 292 (334)
Q Consensus 215 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~ 292 (334)
...+ ..+.+.++.++..++++++.+.|++. ++++.. +..++++ +.++.. .....++...|.+ .|+.
T Consensus 366 l~~~-----g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~-f~~~~~-----~~~~~~l~~~L~~-~g~~ 433 (486)
T 1js3_A 366 FRMY-----GVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVTLGLVC-FRLKGS-----DGLNEALLERINS-ARKI 433 (486)
T ss_dssp HHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECSCCCSSEEE-EEESSC-----HHHHHHHHHHHHH-HTSC
T ss_pred HHHH-----hHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCceeEEE-EEecCh-----HHHHHHHHHHHHh-cCCE
Confidence 3322 13456777888889999999999987 788764 5555554 455421 1123577788655 5654
Q ss_pred EcCCCCcCCCCCCeEEEEecC--CCcccHHHHHHHHHHHHHH
Q 019899 293 VTPGSACHCIEPGWFRCCFTS--LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 293 v~~g~~~~~~~~~~iRi~~~~--~~~~~l~~~l~~l~~~~~~ 332 (334)
+.++..++ ..+++|++++. .+++++++++++|++++++
T Consensus 434 ~~~~~~~~--~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~ 473 (486)
T 1js3_A 434 HLVPCRLR--GQFVLRFAICSRKVESGHVRLAWEHIRGLAAE 473 (486)
T ss_dssp BCEEEEET--TEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEC--CEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 33322232 25689999753 4788999999999998765
No 192
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.95 E-value=3.5e-26 Score=209.24 Aligned_cols=293 Identities=11% Similarity=0.045 Sum_probs=186.6
Q ss_pred CCcEEEecCcHHHHHHHHHHhcC--CCCeEEecCCCCCChhhhhhhc-------------cCcEEEEEeCCCC-------
Q 019899 17 PSQIVLTAGATPAVEILCFCLAD--HGNALLVPSPYYPGFDRDIRFR-------------TGVELIPVHCRST------- 74 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~-------------~g~~v~~v~~~~~------- 74 (334)
.+++++++|+++|+..++..+.. .+++|++.+++|+++....... ....+..++.+..
T Consensus 122 ~~~v~~~~sGseA~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 201 (451)
T 3oks_A 122 DKRSALFNSGSEAVENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFG 201 (451)
T ss_dssp SEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGC
T ss_pred CCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccc
Confidence 57899999999999999977653 5589999999998765443201 1124566665311
Q ss_pred -CCcc---ccHHHHHHHHHHHHHcCCceeEEEEeCCCCCc-cc-CCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCC
Q 019899 75 -DNFA---FSITALDQAFNQARKRGVKVRGILICNPANPV-GN-IIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEE 148 (334)
Q Consensus 75 -~~~~---~~~~~l~~~l~~~~~~~~~~~~i~~~~p~npt-G~-~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~ 148 (334)
+... .+++.+++.+++.. +.+..+++++.|.|++ |. ..+.+.+++|.++|++||+++|+||+|.++.+.+..
T Consensus 202 ~~~~~~~~~~~~~~~~~l~~~~--~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~ 279 (451)
T 3oks_A 202 KELATDGELAAKRAITVIDKQI--GADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAM 279 (451)
T ss_dssp TTTTTCHHHHHHHHHHHHHHHT--CGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS
T ss_pred cccchhhHHHHHHHHHHHHhhc--CCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccc
Confidence 0011 13455555555321 1133446666775544 44 346667999999999999999999999987655542
Q ss_pred cchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh--hcccCCChHHHHHHHHhhCChHHHHH
Q 019899 149 FVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL--TRFCSISAPTQRLLISMLSDTKFIQE 226 (334)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~ 226 (334)
. ..... +....+.|+||+++ .|+|+||+++ ++++++.+... ...++.|++.+.++.++++..+ +
T Consensus 280 ~-~~~~~--------~~~pdi~t~sK~l~-~G~~iG~v~~-~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~--~- 345 (451)
T 3oks_A 280 F-ACEHE--------GIDPDLIVTAKGIA-GGLPLSAVTG-RAEIMDSPHVSGLGGTYGGNPIACAAALATIETIE--S- 345 (451)
T ss_dssp S-GGGGG--------TCCCSEEEECGGGG-TTSSCEEEEE-EHHHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHH--H-
T ss_pred h-hhhhc--------CCCCCeeeehhhhh-CCcceEEEEE-CHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHh--h-
Confidence 2 11111 11112338999998 5999999998 88888877643 4456788999988888875422 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh----CCCcccCCCceeEEeeecCCcCC-CCChhhHHHHHHHHHHhcCeEEcCCCCcCC
Q 019899 227 YLETNKRRIKKLYDSFVAGLKQ----LGIRCSESSAGLYCWADMSGLIP-SYSEKGELELWDKLLNIAKINVTPGSACHC 301 (334)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~l~~----~g~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~ 301 (334)
....++++++.+++.+.|++ ++.....+..|.++|+++..... ........++...+++ +||.+.|+..+
T Consensus 346 --~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~~-- 420 (451)
T 3oks_A 346 --EGLVARAQQIEKIMKDRLGRLQAEDDRIGDVRGRGAMIAMELVKAGTTEPDADLTKALCAGAHA-AGVIVLSCGTY-- 420 (451)
T ss_dssp --TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEBSTTSCCBCHHHHHHHHHHHHH-TTEECEEECTT--
T ss_pred --hhHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEeeEEEEEEEecCccCCCCHHHHHHHHHHHHh-CCcEEecCCCC--
Confidence 12333344444444444443 33222222335567777743111 1122345567777554 79999987644
Q ss_pred CCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 302 IEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 302 ~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
.+++|++++. .+++++++++++|++++++
T Consensus 421 --~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 450 (451)
T 3oks_A 421 --GNVVRFLPPLSIGDDLLNEGLDVLEEVLRG 450 (451)
T ss_dssp --SCEEEECCCTTCCHHHHHHHHHHHHHHHHC
T ss_pred --CCEEEEECCCCCCHHHHHHHHHHHHHHHhh
Confidence 3689998775 5999999999999999864
No 193
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.95 E-value=4.2e-27 Score=211.66 Aligned_cols=275 Identities=15% Similarity=0.193 Sum_probs=192.6
Q ss_pred CcEEEecCcHHHHHHHHHHh-cCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCC
Q 019899 18 SQIVLTAGATPAVEILCFCL-ADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGV 96 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l-~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~ 96 (334)
+++++++|+++++..++.++ .++||+|+++.|+|+++...+. ..|.+++.+++++ +++.+|++++++++++
T Consensus 72 ~~~i~~~~gt~al~~~l~~~~~~~gd~vl~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~------ 143 (391)
T 3dr4_A 72 KHAIACNNGTTALHLALVAMGIGPGDEVIVPSLTYIASANSVT-YCGATPVLVDNDP-RTFNLDAAKLEALITP------ 143 (391)
T ss_dssp SEEEEESSHHHHHHHHHHHHTCCTTCEEEEESSSCTHHHHHHH-HTTCEEEEECBCT-TTCSBCGGGSGGGCCT------
T ss_pred CcEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCchHHHHHHHH-HCCCEEEEEecCc-cccCcCHHHHHHhcCC------
Confidence 38899999999999999999 8999999999999999999998 8999999999853 4578999999998875
Q ss_pred ceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccc-cCCCCcchhhhhhhccccCCCcEEEEeccc--
Q 019899 97 KVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSI-FGNEEFVSMAEILEAEEVDKDRVHIIYGLS-- 173 (334)
Q Consensus 97 ~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s-- 173 (334)
++++|+ ++||||.+.+ +++|.++|+++|+++|+|++|+.+. +.+. .... .+ ++.+.||+
T Consensus 144 ~~~~v~---~~n~tG~~~~---~~~i~~l~~~~~~~li~D~a~~~g~~~~~~---~~~~--------~~-di~~~S~s~~ 205 (391)
T 3dr4_A 144 RTKAIM---PVHLYGQICD---MDPILEVARRHNLLVIEDAAEAVGATYRGK---KSGS--------LG-DCATFSFFGN 205 (391)
T ss_dssp TEEEEC---CBCGGGCCCC---HHHHHHHHHHTTCEEEEECTTCTTCEETTE---ETTS--------SS-SEEEEECBTT
T ss_pred CceEEE---EECCCCChhh---HHHHHHHHHHcCCEEEEECcccccceECCe---eecc--------cC-CEEEEECCCC
Confidence 788666 5689999988 8999999999999999999998633 2111 1110 11 25556655
Q ss_pred ccCCCCCceEEEEeecCHHHHHHHHHhhcccC--------------CChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHH
Q 019899 174 KDLSLPGFRTGVIYSYNESVLAAAKKLTRFCS--------------ISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLY 239 (334)
Q Consensus 174 K~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (334)
|.++ |.+.|+++++++.+.+.++.....+. .......++..+.. .+.+.+..++.+++.
T Consensus 206 K~l~--~g~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~~~~~-----~~~~~~~~~~~~~~~ 278 (391)
T 3dr4_A 206 AIIT--TGEGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQ-----LERVDEHLAARERVV 278 (391)
T ss_dssp SSSC--CBSCEEEEESCHHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHHHHH-----HHTHHHHHHHHHHHH
T ss_pred CcCC--cCCeEEEEECCHHHHHHHHHHHhcCCCCCCcccccccccccCCCHHHHHHHHHH-----HHHHHHHHHHHHHHH
Confidence 8775 35689998877888887765542211 11112222222211 122345566677778
Q ss_pred HHHHHHHHhCCCcccCC-------CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCC---cCCC-------
Q 019899 240 DSFVAGLKQLGIRCSES-------SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSA---CHCI------- 302 (334)
Q Consensus 240 ~~~~~~l~~~g~~~~~~-------~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~---~~~~------- 302 (334)
+++.+.|++.++++..+ ...+.+++.++... ..+..++...| .++||.+.++.. +.+.
T Consensus 279 ~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~~l~~~L-~~~GI~v~~~~~p~~~~~~~~~~~~~ 353 (391)
T 3dr4_A 279 GWYEQKLARLGNRVTKPHVALTGRHVFWMYTVRLGEGL----STTRDQVIKDL-DALGIESRPVFHPMHIMPPYAHLATD 353 (391)
T ss_dssp HHHHHHHGGGTTSEECCCCCTTSCCCCSSEEEEECSSC----SSCHHHHHHHH-HHTTCCCEECCCCGGGSGGGGGGCCT
T ss_pred HHHHHHhhcCCccccCcCCCCCCcceeEEEEEEECCcc----chhHHHHHHHH-HHCCCceeecCCccccChhhhhcCcC
Confidence 88888888877776544 12223456666421 12346788884 557999988752 1110
Q ss_pred --------CCCeEEEEecC-CCcccHHHHHHHHHHHH
Q 019899 303 --------EPGWFRCCFTS-LTHEDIPLVIERIQKVA 330 (334)
Q Consensus 303 --------~~~~iRi~~~~-~~~~~l~~~l~~l~~~~ 330 (334)
....+|+++.. .+++|++++++.|++++
T Consensus 354 ~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l 390 (391)
T 3dr4_A 354 DLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQVL 390 (391)
T ss_dssp TCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTTC
T ss_pred CChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 12468999885 69999999999998764
No 194
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.95 E-value=2.7e-25 Score=200.01 Aligned_cols=282 Identities=13% Similarity=0.152 Sum_probs=193.5
Q ss_pred CcEEEecCcHHHHHHHHHHh-cCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCC
Q 019899 18 SQIVLTAGATPAVEILCFCL-ADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGV 96 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l-~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~ 96 (334)
+++++++|+++++..++.++ .++||+|+++.|+|+++...+. ..|.+++.++++ +++.+|++++++++++. ..
T Consensus 48 ~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~~~~~~~~~~~~-~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~---~~ 121 (394)
T 1o69_A 48 ENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPIC-YLKAKPVFIDCD--ETYNIDVDLLKLAIKEC---EK 121 (394)
T ss_dssp SEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGTHHHH-HTTCEEEEECBC--TTSSBCHHHHHHHHHHC---SS
T ss_pred CcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHHHHHHH-HcCCEEEEEEeC--CCCCcCHHHHHHHHhcc---cC
Confidence 78999999999999999999 8999999999999999999998 899999999984 56789999999999751 11
Q ss_pred ceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEecccc-ccccCCCCcchhhhhhhccccCCCcEEEEeccccc
Q 019899 97 KVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYG-GSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKD 175 (334)
Q Consensus 97 ~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~ 175 (334)
++++|++++ |+|...+ +++|.++|+++|+++|+|++|+ ++.+.+... ..+ .+.++...|.+|.
T Consensus 122 ~~~~v~~~~---~~G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~---~~~-------~~~~~~s~s~~K~ 185 (394)
T 1o69_A 122 KPKALILTH---LYGNAAK---MDEIVEICKENDIVLIEDAAEALGSFYKNKAL---GTF-------GEFGVYSYNGNKI 185 (394)
T ss_dssp CCCEEEEEC---GGGCCCC---HHHHHHHHHHTTCEEEEECTTCTTCEETTEET---TSS-------SSEEEEECCTTSS
T ss_pred CceEEEEEC---CCCChhh---HHHHHHHHHHcCCEEEEECcCcccceeCCccc---ccc-------cCcEEEEEeCCcc
Confidence 578888884 8998877 9999999999999999999998 444432211 110 2233333344676
Q ss_pred CCCCCceEEEEeecCHHHHHHHHHhhcccC----------------CChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHH
Q 019899 176 LSLPGFRTGVIYSYNESVLAAAKKLTRFCS----------------ISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLY 239 (334)
Q Consensus 176 ~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (334)
+ +|.++||++++++++.+.++.....+. .+.....+....+. ++++..+++++++
T Consensus 186 l--~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~-------~l~~~~~~~~~~~ 256 (394)
T 1o69_A 186 I--TTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQME-------VLEQRVLKKREIY 256 (394)
T ss_dssp S--CCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHHT-------THHHHHHHHHHHH
T ss_pred C--CCCCceEEEECCHHHHHHHHHHHHhccccCccccccccCcccCcCHHHHHHHHHHHH-------HHHHHHHHHHHHH
Confidence 6 456899999966888888876533221 11112111111121 2344567788888
Q ss_pred HHHHHHHHhCCCcccCCC----cee-EEeeecCCcC---------------CCCChhhHHHHHHHHHHhcCeEEcCCCCc
Q 019899 240 DSFVAGLKQLGIRCSESS----AGL-YCWADMSGLI---------------PSYSEKGELELWDKLLNIAKINVTPGSAC 299 (334)
Q Consensus 240 ~~~~~~l~~~g~~~~~~~----~g~-~~~~~~~~~~---------------~~~~~~~~~~~~~~ll~~~gi~v~~g~~~ 299 (334)
+++.+.|++. +++..+. .++ ++++.++... ......+..++...| +++||.++++..+
T Consensus 257 ~~l~~~L~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~gI~v~~~~~~ 334 (394)
T 1o69_A 257 EWYKEFLGEY-FSFLDELENSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDL-KNKQIETRPLWKA 334 (394)
T ss_dssp HHHHHHHTTT-EECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHH-HHTTCCCBCCCCC
T ss_pred HHHHHHhccc-ccccCCCCCCcceeEEEEEEecchhhccccccccccccccccccccCHHHHHHHH-HHcCCcccccCCc
Confidence 9999999887 6554432 233 3556666320 000012455777774 5589999988533
Q ss_pred C---CC-CC--------------CeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 300 H---CI-EP--------------GWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 300 ~---~~-~~--------------~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
. +. .. ..+|+.+.. .+++|++++++.|+++++.
T Consensus 335 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~~~l~~~~~~ 386 (394)
T 1o69_A 335 MHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSIKA 386 (394)
T ss_dssp GGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHC-
T ss_pred cccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHHHHHHHHHHHHHHhc
Confidence 1 00 00 234554443 6999999999999998754
No 195
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.95 E-value=2.2e-26 Score=213.03 Aligned_cols=294 Identities=13% Similarity=0.016 Sum_probs=203.5
Q ss_pred CCCC--CCcEE---EecCcHHHHHHHHHHhcCC--------CC-----eEEecCCCCCChhhhhhhccCcEEEEEeCCCC
Q 019899 13 VSFD--PSQIV---LTAGATPAVEILCFCLADH--------GN-----ALLVPSPYYPGFDRDIRFRTGVELIPVHCRST 74 (334)
Q Consensus 13 ~~~~--~~~i~---~~~g~~~~~~~~~~~l~~~--------gd-----~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~ 74 (334)
++++ +++++ +|+|+++++..++.++..+ |+ +|+++.++|.++...++ ..|.+++.+|+++
T Consensus 108 ~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~~~~-~~G~~~~~v~~~~- 185 (502)
T 3hbx_A 108 FNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFAR-YFEVELKEVKLSE- 185 (502)
T ss_dssp TTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHHHHHH-HTTCEEEEECCBT-
T ss_pred hCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHHHHHH-HcCceeEEEecCC-
Confidence 4444 55544 4899999999998887554 76 89999999999999998 8999999999843
Q ss_pred CCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc------CcEEEEecccccccc---C
Q 019899 75 DNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK------NIHVISDEIYGGSIF---G 145 (334)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~------~~~vi~D~~~~~~~~---~ 145 (334)
+++.+|++++++++++ ++++|++++|+||||.+.| +++|.++|+++ |+++++|++|+.+.. .
T Consensus 186 ~~~~~d~~~l~~~i~~------~t~~v~~~~~~n~tG~~~~---l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~ 256 (502)
T 3hbx_A 186 GYYVMDPQQAVDMVDE------NTICVAAILGSTLNGEFED---VKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLY 256 (502)
T ss_dssp TBCSCCHHHHHHHCCT------TEEEEEEEBSCTTTCCBCC---HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHC
T ss_pred CcCcCCHHHHHHHHhh------CCEEEEEecCCCCCCcccC---HHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhC
Confidence 4478999999999986 7899999999999999999 88899999998 999999999986541 1
Q ss_pred CCCcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHH-HHHHhhcc-----------cCCChHHHHH
Q 019899 146 NEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLA-AAKKLTRF-----------CSISAPTQRL 213 (334)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~-~~~~~~~~-----------~~~~~~~~~~ 213 (334)
+.....+. . .+.+.+..|.+|+++ .+.++|+++.++++.+. .+.....+ ++.+.....+
T Consensus 257 ~~~~~~~~-~-------~~~D~v~~s~hK~l~-~p~g~G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a 327 (502)
T 3hbx_A 257 PELEWDFR-L-------PLVKSINVSGHKYGL-VYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIA 327 (502)
T ss_dssp TTCCCSTT-S-------TTEEEEEEETTTTTC-CCSSCEEEEESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHH
T ss_pred cccccccC-C-------CCceEEEECcccccC-CCCCeEEEEEeCHHHhhHHhccCcccccCCCCCccccCCchHHHHHH
Confidence 11111110 0 456677789999875 66678998886665432 22111111 1111112222
Q ss_pred HHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CcccCC-CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCe
Q 019899 214 LISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLG-IRCSES-SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKI 291 (334)
Q Consensus 214 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi 291 (334)
+...+... ..+.+.++.++..++++++.+.|++++ +++..+ ....++.++++.... .+..++... |.++||
T Consensus 328 ~~~al~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~----~~~~~l~~~-L~~~Gi 400 (502)
T 3hbx_A 328 QYYQLIRL--GHEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFSLKDSSC----HTEFEISDM-LRRYGW 400 (502)
T ss_dssp HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTTCEEECSCSSSSSEEEEEESSCSS----CCHHHHHHH-HHTTTC
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCCCceEEEEEecCCCc----CCHHHHHHH-HHhCCc
Confidence 22222211 133346777888889999999999985 887755 334455567764211 123477777 555899
Q ss_pred EEcCCCCc-CCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 292 NVTPGSAC-HCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 292 ~v~~g~~~-~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
.+...... ......++|++++. .++++++.+++.|++++++.
T Consensus 401 ~v~~~~~p~~~~~~~~lRisv~~~~t~edid~li~~L~~~l~~l 444 (502)
T 3hbx_A 401 IVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEKVMREL 444 (502)
T ss_dssp BCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEeeccCCcccCCceEEEEEeCCCCCHHHHHHHHHHHHHHHHHH
Confidence 87432211 11124689999986 69999999999999988653
No 196
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.94 E-value=1.4e-26 Score=211.05 Aligned_cols=280 Identities=17% Similarity=0.179 Sum_probs=189.0
Q ss_pred CCCcEEEecCcHHHHHHHHHH---hcCCCCeEEecCCCCCChhhhhhhc-------------cCc------EEEEEeCCC
Q 019899 16 DPSQIVLTAGATPAVEILCFC---LADHGNALLVPSPYYPGFDRDIRFR-------------TGV------ELIPVHCRS 73 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~---l~~~gd~vl~~~p~~~~~~~~~~~~-------------~g~------~v~~v~~~~ 73 (334)
+.++|++++|+++|+..++.. +. ++++|++.+|+|+++....... .|. +++.++.
T Consensus 111 ~~~~v~~~~sgseA~~~al~~ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-- 187 (434)
T 2epj_A 111 RGGMIRFVNSGTEATMTAIRLARGYT-GRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-- 187 (434)
T ss_dssp TTCEEEEESSHHHHHHHHHHHHHHHH-CCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET--
T ss_pred CCCEEEEeCCHHHHHHHHHHHHHHhh-CCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC--
Confidence 468999999999999999987 44 5578888899998755432101 132 2445552
Q ss_pred CCCccccHHHHHHHHHHHHHcCCceeEEEEeCC-CCCcccCC-CHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcch
Q 019899 74 TDNFAFSITALDQAFNQARKRGVKVRGILICNP-ANPVGNII-PRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVS 151 (334)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~ 151 (334)
.|+++|++++++. +.++++| +++| +|+||.+. +.+.+++|.++|++||+++|+||+|.++ ..+... .
T Consensus 188 -----~d~~~le~~l~~~---~~~~~~v-i~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~-~ 256 (434)
T 2epj_A 188 -----NDVEALERVFAEY---GDRIAGV-IVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGLEG-A 256 (434)
T ss_dssp -----TCHHHHHHHHHHH---GGGEEEE-EECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSSTTH-H
T ss_pred -----CCHHHHHHHHHhC---CCCEEEE-EEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCcch-h
Confidence 3789999999753 1256654 5555 67899876 6899999999999999999999999976 323211 1
Q ss_pred hhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh-----hcccCCChHHHHHHHHhhCChHHHHH
Q 019899 152 MAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL-----TRFCSISAPTQRLLISMLSDTKFIQE 226 (334)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~ 226 (334)
. +..+ . ... +.|+||.++ .|+|+||+++ ++++++.+... ...++.|++.+.++..+++..+ +
T Consensus 257 ~-~~~~---~-~~d---i~s~sK~l~-~G~~~G~v~~-~~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~---~ 323 (434)
T 2epj_A 257 Q-GYFN---I-EGD---IIVLGKIIG-GGFPVGAVAG-SREVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALE---E 323 (434)
T ss_dssp H-HHHT---C-CCS---EEEEEGGGG-TTSSCEEEEE-CHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHH---H
T ss_pred h-HHhC---C-CCC---eeeecchhc-CCcceeeeee-cHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHH---h
Confidence 1 1111 1 111 348999998 5999999998 78887777541 2345678888877777764322 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC----CCcccCCCceeEEeeecCCc-CCC------CChhhHHHHHHHHHHhcCeEEcC
Q 019899 227 YLETNKRRIKKLYDSFVAGLKQL----GIRCSESSAGLYCWADMSGL-IPS------YSEKGELELWDKLLNIAKINVTP 295 (334)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~l~~~----g~~~~~~~~g~~~~~~~~~~-~~~------~~~~~~~~~~~~ll~~~gi~v~~ 295 (334)
.+..++++++.+++.+.|+++ ++....+..|.++|++++.. ... .......++...|+ ++||.+.|
T Consensus 324 --~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~ 400 (434)
T 2epj_A 324 --EPVYSVSREAAKALEEAASEVLDRTGLPYTINRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEML-RRGVFIAP 400 (434)
T ss_dssp --SCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHH-HTTEECCS
T ss_pred --cCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeCCCcccchhccccCHHHHHHHHHHHH-HCCeEEec
Confidence 234556666667777776653 55332233456778888751 100 01123457788865 58999998
Q ss_pred CCCcCCCCCCeEEEEecCCCcccHHHHHHHHHHHHHH
Q 019899 296 GSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 296 g~~~~~~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
+.. .++|+++. .+++++++++++|++++++
T Consensus 401 ~~~------~~~~~~~~-~t~e~i~~~l~~l~~~l~~ 430 (434)
T 2epj_A 401 SNL------EAVFTGLP-HQGEALEIAVEGLRSSLKT 430 (434)
T ss_dssp STT------SCEECCTT-CSHHHHHHHHHHHHHHHHH
T ss_pred cCC------CcEEEecc-CCHHHHHHHHHHHHHHHHH
Confidence 752 34676654 7999999999999998875
No 197
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.94 E-value=5.2e-26 Score=210.71 Aligned_cols=302 Identities=14% Similarity=0.130 Sum_probs=203.8
Q ss_pred hhhhhhhcCCCCCCC-CcEEEecCcHHHHHHHHHHh----c---------CC------CC-eEEecCCCCCChhhhhhhc
Q 019899 3 GFMSQVLGQAVSFDP-SQIVLTAGATPAVEILCFCL----A---------DH------GN-ALLVPSPYYPGFDRDIRFR 61 (334)
Q Consensus 3 ~~~~~~~~~~~~~~~-~~i~~~~g~~~~~~~~~~~l----~---------~~------gd-~vl~~~p~~~~~~~~~~~~ 61 (334)
+|+.+.++ +++ +++++|+|+|+++..++.++ + .+ |+ .|+++.+.|.++...+. .
T Consensus 147 ~~la~~~g----~~~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~-~ 221 (497)
T 2qma_A 147 NWLCDKYD----LSEKADGIFTSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSAS-W 221 (497)
T ss_dssp HHHHHHTT----CCTTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHH-H
T ss_pred HHHHHHhC----CCCCCCeEEcCCchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEEECCCchHHHHHHHH-H
Confidence 45555544 444 78999999999999988873 2 12 46 79999999999998888 7
Q ss_pred cCc---EEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEecc
Q 019899 62 TGV---ELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEI 138 (334)
Q Consensus 62 ~g~---~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~ 138 (334)
.|. +++.+|++ +++.+|+++|++++++....+.++.+|++++++||||.+.+ +++|.++|++||+++++|++
T Consensus 222 ~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~---l~~I~~l~~~~~~~l~vD~a 296 (497)
T 2qma_A 222 MGLGEKAVMTVDAN--ADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDD---LDFIADMAVKHDMWMHVDGA 296 (497)
T ss_dssp TTSCGGGEEEECBC--TTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHHHHHTCEEEEEET
T ss_pred cCCCcccEEEEecC--CCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCC---HHHHHHHHHHcCCEEEEehh
Confidence 665 79999983 56789999999999875444434558899999999999988 99999999999999999999
Q ss_pred ccccccCCCCcch-hhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhccc-C-----CC----
Q 019899 139 YGGSIFGNEEFVS-MAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFC-S-----IS---- 207 (334)
Q Consensus 139 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~-~-----~~---- 207 (334)
|+.+.+... ... +..+ ...++++.|+||+++.+ .++|+++++++..++.+.....+. . .+
T Consensus 297 ~~~~~~~~~-~~~~~~gi-------~~~D~i~~s~hK~l~~p-~~~G~l~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~ 367 (497)
T 2qma_A 297 YGGALILSS-HKSRLKGV-------ERAHSISVDFHKLFYQT-ISCGALLVNDKSNFKFLLHHADYLNREHDELPNLVDK 367 (497)
T ss_dssp TGGGGGGST-TGGGGTTG-------GGCSEEEEETTTTTCCC-SSCEEEEESCGGGGGGGCC------------------
T ss_pred hhHHHHhCc-chHhhcCc-------ccCCEEEEcchhccCCC-cceEEEEEeCHHHHHHhcCCchhcCCccccCCCcccc
Confidence 998665332 111 1111 12346677999998744 689999986666443332111111 0 00
Q ss_pred ---------hHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCccc-CCCceeEEeeecCCcCCCCChh
Q 019899 208 ---------APTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCS-ESSAGLYCWADMSGLIPSYSEK 276 (334)
Q Consensus 208 ---------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~-~~~~g~~~~~~~~~~~~~~~~~ 276 (334)
.+.+.+....+. .+.+.++.+++.++++++.+.|++. ++++. .+..+ ++++++.+.... ...
T Consensus 368 ~~~~~r~~~al~~~~~l~~lg-----~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~-~v~f~~~~~~~~-~~~ 440 (497)
T 2qma_A 368 SIATTKRFDALKVFMTMQNVG-----PKALGDMYDHLLAQTLEVADMIRTNDQFELLAEPSLS-TVLFRATHETAD-LDE 440 (497)
T ss_dssp --CCSCCCTHHHHHHHHHHTC-----HHHHHHHHHHHHHHHHHHHHHHHTCTTEEECSCCSSS-EEEEEECCSSSC-HHH
T ss_pred CCCCCCchhHHHHHHHHHHhC-----HHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEcCCCce-EEEEEEcCCccC-HHH
Confidence 111222222221 2345667788889999999999986 78875 44445 455566432110 001
Q ss_pred hHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEe-cC-CCcccHHHHHHHHHHHHHHc
Q 019899 277 GELELWDKLLNIAKINVTPGSACHCIEPGWFRCCF-TS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 277 ~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~-~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
...++...+. +.|+.+.++..+. ..+++|+++ .. .++++++++++.|+++++++
T Consensus 441 l~~~l~~~l~-~~G~~~~~~~~~~--g~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~ 496 (497)
T 2qma_A 441 LNKALRLEAL-TRGIAVLGETIVD--GKTALKFTILNPCLTTSDFESLLSKINMLAVEL 496 (497)
T ss_dssp HHHHHHHHHH-HHTSCBCEEEEET--TEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHH-hCCCEEEEeeEEC--CEEEEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence 1234556644 4788876544332 246899998 43 68999999999999998764
No 198
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.94 E-value=1.1e-25 Score=207.01 Aligned_cols=300 Identities=16% Similarity=0.112 Sum_probs=199.2
Q ss_pred hhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc--------CCCCeEEecCCCCCChhhhhhhccC------------cEE
Q 019899 7 QVLGQAVSFDPSQIVLTAGATPAVEILCFCLA--------DHGNALLVPSPYYPGFDRDIRFRTG------------VEL 66 (334)
Q Consensus 7 ~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~--------~~gd~vl~~~p~~~~~~~~~~~~~g------------~~v 66 (334)
+.+.+..+.+.++|++++|+++|+..++..+. .++++|++.+|+|.++........| ..+
T Consensus 104 ~~l~~~~~~~~~~v~~~~sGseA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (476)
T 3i5t_A 104 EKIATLTPGDLNRIFFTTGGSTAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRI 183 (476)
T ss_dssp HHHHTTSSTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTE
T ss_pred HHHHhcCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCc
Confidence 33444455567899999999999999998875 3467999999999877644331111 123
Q ss_pred EEEeCCCCCC-cccc--------HHHHHHHHHHHHHcCCceeEEEEeCCCCCccc-CCCHHHHHHHHHHHHhcCcEEEEe
Q 019899 67 IPVHCRSTDN-FAFS--------ITALDQAFNQARKRGVKVRGILICNPANPVGN-IIPRETLYELLDFAREKNIHVISD 136 (334)
Q Consensus 67 ~~v~~~~~~~-~~~~--------~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~-~~~~~~l~~i~~~~~~~~~~vi~D 136 (334)
..++.+.... +..+ +++|++++++.. ..++++|++..++|++|. +.+.+.+++|.++|++||+++|+|
T Consensus 184 ~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~--~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~D 261 (476)
T 3i5t_A 184 SFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLG--PDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISD 261 (476)
T ss_dssp EEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEE
T ss_pred EEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcC--CCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEE
Confidence 3333221111 1222 778888887421 125676777766888886 778889999999999999999999
Q ss_pred ccccccccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHHh---------hcccCC
Q 019899 137 EIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKKL---------TRFCSI 206 (334)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~~---------~~~~~~ 206 (334)
|+|.++.+.|..+ ...... +. ... +.++||+++ .| +|+|++++ ++++++.+... ...++.
T Consensus 262 Ev~~g~gr~G~~~-~~~~~~---~v-~pd---i~t~sK~l~-~G~~plg~v~~-~~~i~~~~~~~~~~~~~~~~~~t~~~ 331 (476)
T 3i5t_A 262 EVVTGFGRCGEWF-ASEKVF---GV-VPD---IITFAKGVT-SGYVPLGGLAI-SEAVLARISGENAKGSWFTNGYTYSN 331 (476)
T ss_dssp CTTTTTTTTSSSC-HHHHTT---CC-CCS---EEEECGGGG-TTSSCCEEEEE-CHHHHHTTSGGGCTTCEECCCCTTTT
T ss_pred ecccCCccccCce-eeeccc---CC-Ccc---hhhhhhhhc-CCCcCeEEEEE-CHHHHHHHhcCCcccccccccCCCCc
Confidence 9999876655422 221011 11 112 236889998 68 99999999 88998888643 245678
Q ss_pred ChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-C---cccCCCceeEEeeecCCcCCCCCh-----hh
Q 019899 207 SAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLG-I---RCSESSAGLYCWADMSGLIPSYSE-----KG 277 (334)
Q Consensus 207 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~---~~~~~~~g~~~~~~~~~~~~~~~~-----~~ 277 (334)
|++++.++.++++..+ + +...++++++.+++.+.|+++. . ....+ .|.++++++......... ..
T Consensus 332 np~a~aAa~aaL~~~~---~--~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v~~-~G~~~~i~~~~~~~~~~~~~~~~~~ 405 (476)
T 3i5t_A 332 QPVACAAALANIELME---R--EGIVDQAREMADYFAAALASLRDLPGVAETRS-VGLVGCVQCLLDPTRADGTAEDKAF 405 (476)
T ss_dssp CHHHHHHHHHHHHHHH---H--TTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEE-ETTEEEEEECCC-----CCHHHHHH
T ss_pred CHHHHHHHHHHHHHHH---h--HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEe-cCceeEEEEecCccccccccchhHH
Confidence 8888888888875422 1 3455666777777777777542 2 22233 344566777643211100 02
Q ss_pred HHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 278 ELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 278 ~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
...+...+++ +||.+.|. .+++|++++. .+++++++++++|++++++
T Consensus 406 ~~~~~~~l~~-~Gv~v~~~-------g~~iRi~p~l~~t~e~i~~~l~~l~~~l~~ 453 (476)
T 3i5t_A 406 TLKIDERCFE-LGLIVRPL-------GDLCVISPPLIISRAQIDEMVAIMRQAITE 453 (476)
T ss_dssp HHHHHHHHHH-TTEECEEE-------TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-CCCEEEec-------CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 4467777555 79999872 1689999663 6999999999999999865
No 199
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.94 E-value=2.6e-26 Score=210.87 Aligned_cols=298 Identities=13% Similarity=0.096 Sum_probs=195.5
Q ss_pred hhcCCCCCCCCcEEEecCcHHHHHHHHHHhcC--------CCCeEEecCCCCCChhhhhhhccCc-----------EEEE
Q 019899 8 VLGQAVSFDPSQIVLTAGATPAVEILCFCLAD--------HGNALLVPSPYYPGFDRDIRFRTGV-----------ELIP 68 (334)
Q Consensus 8 ~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~--------~gd~vl~~~p~~~~~~~~~~~~~g~-----------~v~~ 68 (334)
.+.+..+.+.++|++++|+++|+..++..+.. ++++|++.+|+|.++........+. .+..
T Consensus 107 ~l~~~~~~~~~~v~~~~sGseA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~ 186 (472)
T 3hmu_A 107 KLAELAPGDLNHVFFAGGGSEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHH 186 (472)
T ss_dssp HHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEE
T ss_pred HHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEE
Confidence 33333455678999999999999999998864 5689999999998876544312221 3445
Q ss_pred EeCCC--C-CCcccc--------HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEEEEe
Q 019899 69 VHCRS--T-DNFAFS--------ITALDQAFNQARKRGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHVISD 136 (334)
Q Consensus 69 v~~~~--~-~~~~~~--------~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D 136 (334)
++.+. . +.+ .+ +++|++++++... .++.+|++..+++++|.+. +.+.+++|.++|++||+++|+|
T Consensus 187 v~~p~~~~~~~~-~~~~~~~~~~~~~le~~i~~~~~--~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~D 263 (472)
T 3hmu_A 187 INQPNWWAEGGD-MDPEEFGLARARELEEAILELGE--NRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIAD 263 (472)
T ss_dssp ECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHCG--GGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEE
T ss_pred eCCCccccCCcc-cCHHHHHHHHHHHHHHHHHhcCC--CCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEE
Confidence 55321 0 111 23 7888888874310 2566555555577888766 7888999999999999999999
Q ss_pred ccccccccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHH----hhcccCCChHHHH
Q 019899 137 EIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKK----LTRFCSISAPTQR 212 (334)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~----~~~~~~~~~~~~~ 212 (334)
|+|.+|...|..+ ..... + . ... +.++||+++..|+|+|++++ ++++.+.+.. ....++.|++++.
T Consensus 264 Ev~~gfgr~G~~~-a~~~~-~---v-~pd---i~t~sK~l~gg~~plG~v~~-~~~i~~~~~~~~~~~~~t~~~np~a~a 333 (472)
T 3hmu_A 264 EVICGFGRTGNWF-GTQTM-G---I-RPH---IMTIAKGLSSGYAPIGGSIV-CDEVAHVIGKDEFNHGYTYSGHPVAAA 333 (472)
T ss_dssp CTTTTTTTTSSSC-HHHHH-T---C-CCS---EEEECGGGTTTSSCCEEEEE-EHHHHHHHTTSCBCCCCTTTTCHHHHH
T ss_pred ccccCCcccCccc-hhHHh-C---C-CCc---eeeechhhhcCCcceEEEEE-CHHHHHhcccCCccccCCCCCCHHHHH
Confidence 9999876655422 11111 1 1 122 23688999844489999999 8899888831 1235678889988
Q ss_pred HHHHhhCChHHHHHHHHHHHHHHH-HHHHHHHHHHHhC---C-CcccCCCceeEEeeecCCcCCCCC------hhhHHHH
Q 019899 213 LLISMLSDTKFIQEYLETNKRRIK-KLYDSFVAGLKQL---G-IRCSESSAGLYCWADMSGLIPSYS------EKGELEL 281 (334)
Q Consensus 213 ~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~---g-~~~~~~~~g~~~~~~~~~~~~~~~------~~~~~~~ 281 (334)
++.++++..+ + +...++++ ++.+++.+.|+++ + +....+. |.++++++........ .....++
T Consensus 334 Aa~aaL~~~~---~--~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr~~-G~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 407 (472)
T 3hmu_A 334 VALENLRILE---E--ENILDHVRNVAAPYLKEKWEALTDHPLVGEAKIV-GMMASIALTPNKASRAKFASEPGTIGYIC 407 (472)
T ss_dssp HHHHHHHHHH---H--TTHHHHHHHTHHHHHHHHHHGGGGSTTEEEEEEE-TTEEEEEECSCGGGTCCBSSCTTHHHHHH
T ss_pred HHHHHHHHHH---H--hHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEec-CceEEEEEecCccccccccchhHHHHHHH
Confidence 8888775322 1 23444555 5666666666553 1 2222333 4455566653211000 1124567
Q ss_pred HHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 282 WDKLLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 282 ~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
...|++ +||.+.|+. +++|++++. .+++++++++++|++++++
T Consensus 408 ~~~l~~-~Gv~v~~~g-------~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 451 (472)
T 3hmu_A 408 RERCFA-NNLIMRHVG-------DRMIISPPLVITPAEIDEMFVRIRKSLDE 451 (472)
T ss_dssp HHHHHH-TTBCCEEET-------TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-CCcEEEecC-------CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 777555 799998752 689999664 6999999999999999865
No 200
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.94 E-value=1.5e-25 Score=206.48 Aligned_cols=303 Identities=14% Similarity=0.118 Sum_probs=212.6
Q ss_pred hhhhhhhhcCCCCCCC--------CcEEEecCcHHHHHHHHHHhcC-------------------CCCeEEecCCCCCCh
Q 019899 2 AGFMSQVLGQAVSFDP--------SQIVLTAGATPAVEILCFCLAD-------------------HGNALLVPSPYYPGF 54 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~--------~~i~~~~g~~~~~~~~~~~l~~-------------------~gd~vl~~~p~~~~~ 54 (334)
++|+.+.++ ++... ...++|+|+|+++..++.+..+ +++.|+++.++|.++
T Consensus 124 ~~~l~~l~g--~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~ 201 (481)
T 4e1o_A 124 MDWLAKMLG--LPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLVAYASDQAHSSV 201 (481)
T ss_dssp HHHHHHHHT--CCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHH
T ss_pred HHHHHHHhC--CChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCeEEEEcCcchHHH
Confidence 467777766 33221 3678999999999888876532 567999999999999
Q ss_pred hhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEE
Q 019899 55 DRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVI 134 (334)
Q Consensus 55 ~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi 134 (334)
...+. ..|.+++.+|+ ++++.+|+++|+++|++....+..+.+|+++.++|++|.+.| +++|+++|++||++++
T Consensus 202 ~~~~~-~~g~~~~~v~~--~~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~---l~~I~~la~~~~~~lh 275 (481)
T 4e1o_A 202 EKAGL-ISLVKMKFLPV--DDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDC---LSELGPICAREGLWLH 275 (481)
T ss_dssp HHHHH-HHTCEEEEECC--CTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHHHHHTCEEE
T ss_pred HHHHH-hCCCceEEEEc--CCCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCC---HHHHHHHHHHcCCeEE
Confidence 99988 88999999998 466789999999999986666656888999999999999988 9999999999999999
Q ss_pred EeccccccccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhh-ccc---------
Q 019899 135 SDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLT-RFC--------- 204 (334)
Q Consensus 135 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~-~~~--------- 204 (334)
+|++|+.+.+..........- . ...+.+..+++|+++.| ...|+++.+++.......... .+.
T Consensus 276 vDaA~g~~~~~~~~~~~~~~g-----i-~~aDsi~~~~hK~l~~p-~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~ 348 (481)
T 4e1o_A 276 IDAAYAGTAFLCPEFRGFLKG-----I-EYADSFTFNPSKWMMVH-FDCTGFWVKDKYKLQQTFSVNPIYLRHANSGVAT 348 (481)
T ss_dssp EECTTGGGGGGSGGGGGGGTT-----G-GGCSEEEECHHHHSSCC-SSCEEEEESBHHHHHTTTCCCCGGGCCTTTTTSC
T ss_pred eehhhHHHHHhChhhHHHhcC-----c-ccCCEEEEChHHhcCCC-CceEEEEEeCHHHHHHHhcCCchhccCcccCCCC
Confidence 999998754322211111100 0 12245667999999744 457787776776543211111 110
Q ss_pred -----C--C----ChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCceeEEeeecCCcCCC
Q 019899 205 -----S--I----SAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSESSAGLYCWADMSGLIPS 272 (334)
Q Consensus 205 -----~--~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~ 272 (334)
+ . ....+.+...++ ..+.+.++.++..++++++.+.|++. |+++..+....+++++++..
T Consensus 349 ~~~~~~~~~~r~~~~l~~~~al~~~-----g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~--- 420 (481)
T 4e1o_A 349 DFMHWQIPLSRRFRSVKLWFVIRSF-----GVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHLGLVVFRLKGP--- 420 (481)
T ss_dssp CGGGGSSSSCCCCTHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHTCTTEECCSCCCSSEEEEEESSC---
T ss_pred CcccccccCCCCccHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEeCCc---
Confidence 0 0 122223222222 13456777888999999999999987 88887665556667777542
Q ss_pred CChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC--CCcccHHHHHHHHHHHHHH
Q 019899 273 YSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS--LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 273 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~--~~~~~l~~~l~~l~~~~~~ 332 (334)
.....++.++|.++..+.+.|+... ...++|+++++ .+++|+++++++|+++.++
T Consensus 421 --~~~~~~l~~~L~~~g~~~~~~~~~~---g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~ 477 (481)
T 4e1o_A 421 --NSLTENVLKEIAKAGRLFLIPATIQ---DKLIIRFTVTSQFTTRDDILRDWNLIRDAATL 477 (481)
T ss_dssp --HHHHHHHHHHHHHHCSSBCEEEEET---TEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred --hHHHHHHHHHHHhCCeEEEEeeEEC---CEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 1234678888666433555544332 24689999774 4789999999999998875
No 201
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.94 E-value=1.8e-25 Score=204.46 Aligned_cols=293 Identities=14% Similarity=0.095 Sum_probs=188.1
Q ss_pred hhhcCCCCCCCCc---EEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhh--------hhhhccCcEEE--EEeCCC
Q 019899 7 QVLGQAVSFDPSQ---IVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDR--------DIRFRTGVELI--PVHCRS 73 (334)
Q Consensus 7 ~~~~~~~~~~~~~---i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~--------~~~~~~g~~v~--~v~~~~ 73 (334)
+++++.++++.+. .++++++++|+..++.+++++||+|+++++.|.++.. .+. ..|..+. .++++
T Consensus 107 ~~~a~l~g~~~~~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~-~~g~~~~~~~~~vd- 184 (490)
T 2a7v_A 107 RRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRIS-ATSIFFESMPYKLN- 184 (490)
T ss_dssp HHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC--------------------------------CCBC-
T ss_pred HHHHHHcCCCcccCceEEeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHH-HcCCeEEEEecccc-
Confidence 4444455666653 3455688999999999999999999999999876432 223 4454433 44443
Q ss_pred CCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccc-cccCCCCcchh
Q 019899 74 TDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGG-SIFGNEEFVSM 152 (334)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~-~~~~~~~~~~~ 152 (334)
++.+.+|++++++++++. ++++|+++.++||+ ..+ +++|.++|+++|+++++|++|.. +.+.+....++
T Consensus 185 ~~~~~iD~d~le~~l~~~-----~~klIi~~~s~~~~--~~d---l~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~ 254 (490)
T 2a7v_A 185 PKTGLIDYNQLALTARLF-----RPRLIIAGTSAYAR--LID---YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPF 254 (490)
T ss_dssp TTTCSBCHHHHHHHHHHH-----CCSEEEECCSSCCS--CCC---HHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGG
T ss_pred cccCCcCHHHHHHHHhhc-----CCcEEEEcCCCCCC--ccc---HHHHHHHHHHcCCEEEEccccccccccCCcCCCCC
Confidence 245689999999999764 78888888888874 556 89999999999999999999753 22323222121
Q ss_pred hhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCH--------------HHHHHHHHhhccc---CCChHHHHHHH
Q 019899 153 AEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNE--------------SVLAAAKKLTRFC---SISAPTQRLLI 215 (334)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~--------------~~~~~~~~~~~~~---~~~~~~~~~~~ 215 (334)
...++++.|+||++ .|.+.|+++++++ ++.+.+++....+ +.+.....+++
T Consensus 255 ----------~~aDiv~~S~hK~l--~Gp~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla 322 (490)
T 2a7v_A 255 ----------KHADIVTTTTHKTL--RGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVA 322 (490)
T ss_dssp ----------GTCSEEEEESSGGG--CSCSCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHH
T ss_pred ----------CCCCEEEECCcccC--ccccchheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHH
Confidence 12347889999998 3456799998553 3556666543332 23444444444
Q ss_pred HhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccC-CCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEc
Q 019899 216 SMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSE-SSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVT 294 (334)
Q Consensus 216 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~ 294 (334)
.++... ..+.+.++.+++.++++++.+.|.+.|+++.. ....+++|++++... .++.++... |++.||.+.
T Consensus 323 ~Al~~~--~~~~~~~~~~~~~~na~~L~~~L~~~G~~v~~~~t~t~lv~vdl~~~g-----~~~~~~~~~-L~~~GI~v~ 394 (490)
T 2a7v_A 323 VALKQA--CTPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKG-----LDGARAERV-LELVSITAN 394 (490)
T ss_dssp HHHHHH--HSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECTTTT-----CCHHHHHHH-HHHTTEECE
T ss_pred HHHHHH--hhhhHHHHHHHHHHHHHHHHHHHHHcCcEEecCCCCCeEEEEEeCCCC-----CCHHHHHHH-HHhCCeEEe
Confidence 444321 12334677888999999999999999998864 345677888886431 123455555 677899998
Q ss_pred CCCCcC---CCCCCeEEEEecC-----CCcccHHHHHHHHHHHHH
Q 019899 295 PGSACH---CIEPGWFRCCFTS-----LTHEDIPLVIERIQKVAE 331 (334)
Q Consensus 295 ~g~~~~---~~~~~~iRi~~~~-----~~~~~l~~~l~~l~~~~~ 331 (334)
.+..++ +..++.+|++... .+++|++++++.|.++++
T Consensus 395 ~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~ 439 (490)
T 2a7v_A 395 KNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp EECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred cCccCCCCCCCCCCceEecccccccCCCCHHHHHHHHHHHHHHHH
Confidence 544332 2235789998642 578999999999988875
No 202
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.94 E-value=6.3e-26 Score=208.66 Aligned_cols=296 Identities=16% Similarity=0.200 Sum_probs=187.9
Q ss_pred CCcEEEecCcHHHHHHHHHHhcCC-----C----CeEEecCCCCCChhhhhhhccCcEEEEEeC----CCC----CCccc
Q 019899 17 PSQIVLTAGATPAVEILCFCLADH-----G----NALLVPSPYYPGFDRDIRFRTGVELIPVHC----RST----DNFAF 79 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l~~~-----g----d~vl~~~p~~~~~~~~~~~~~g~~v~~v~~----~~~----~~~~~ 79 (334)
.+++++|+|+++|+..++.++.++ | |+|+++.+.|..+..... ..|..+..... +.. .++.+
T Consensus 89 ~~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d~Ii~~~~h~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (467)
T 2oqx_A 89 YQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQ-INGCTVRNVYIKEAFDTGVRYDFKGNF 167 (467)
T ss_dssp CSEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTTCEEEESSCCHHHHHHHH-HTTCEEEECBCTTTTCTTSCCTTTTCB
T ss_pred cCcEEEcCCcHHHHHHHHHHHhccccccCCCCccceEEecccccccchhhhh-ccCcceeeccccccccCCCCCCccCCc
Confidence 378999999999999999998877 8 998877433333333444 45666554321 111 34568
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCc-ccCCCHHHHHHHHHHHHhcCcEEEEeccccc----------cccCCCC
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPV-GNIIPRETLYELLDFAREKNIHVISDEIYGG----------SIFGNEE 148 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~npt-G~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~----------~~~~~~~ 148 (334)
|+++|++++++.. ..++++|++++|+||+ |.+++.+++++|.++|++||+++|+|+++.. ..+.+..
T Consensus 168 d~~~Le~~i~~~~--~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~ 245 (467)
T 2oqx_A 168 DLEGLERGIEEVG--PNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWT 245 (467)
T ss_dssp CHHHHHHHHHHHC--GGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSC
T ss_pred CHHHHHHHHHhcC--CCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCcc
Confidence 9999999998531 1268999999999997 9999999999999999999999999966533 1232322
Q ss_pred cchhhh-hhhccccCCCcEEEEecccccCCCC-CceEEEEeecCH---HHHHHHHHhhc-c-----c-CCChHHHHHHHH
Q 019899 149 FVSMAE-ILEAEEVDKDRVHIIYGLSKDLSLP-GFRTGVIYSYNE---SVLAAAKKLTR-F-----C-SISAPTQRLLIS 216 (334)
Q Consensus 149 ~~~~~~-~~~~~~~~~~~~~~~~s~sK~~~~~-g~r~g~i~~~~~---~~~~~~~~~~~-~-----~-~~~~~~~~~~~~ 216 (334)
...+.. .... .+ +++.|+||+++++ | ||++++++ +....++.... . + ..+.....++..
T Consensus 246 ~~~~~~~~~~~----~d--~~~~s~sK~~g~~~G---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 316 (467)
T 2oqx_A 246 IEQITRETYKY----AD--MLAMSAKKDAMVPMG---GLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAV 316 (467)
T ss_dssp HHHHHHHHGGG----CS--EEEEESSSTTCCSSC---EEEEECSGGGHHHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHH
T ss_pred HHHHhhhhhcc----CC--eEEEecccccCCCCc---eEEEecChhHHHHHHHHHHhhhccCCcccccchhhhHHHHHHH
Confidence 222210 0010 22 3578999999866 4 78887444 24344433221 1 1 112222222222
Q ss_pred hhCChHHHHHHH-HHHHHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCC---cCCCCChhhHHHHHHHHHHhcCeE
Q 019899 217 MLSDTKFIQEYL-ETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSG---LIPSYSEKGELELWDKLLNIAKIN 292 (334)
Q Consensus 217 ~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~ll~~~gi~ 292 (334)
.+ ++++ .+..++..++.+++.+.|++.++++. +.+++++|++++. ..+. ...+...+...|++++||.
T Consensus 317 ~l------~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~L~~~~gv~ 388 (467)
T 2oqx_A 317 GL------YDGMNLDWLAYRIAQVQYLVDGLEEIGVVCQ-QAGGHAAFVDAGKLLPHIPA-DQFPAQALACELYKVAGIR 388 (467)
T ss_dssp HH------HHTTCHHHHHHHHHHHHHHHHHHHHTTCCEE-EECSSCEEEEHHHHSTTSCG-GGCHHHHHHHHHHHHHCEE
T ss_pred hh------HhhhhHHHHHHHHHHHHHHHHHHHHCCCeee-cCCceEEEEechhhcccCCc-ccccHHHHHHHHHHhcCce
Confidence 11 1111 12233446777888888888788777 7778889998853 1111 1111445688865778999
Q ss_pred EcCCCCc--CCC---------CCCeEEEEecC--CCcccHHHHHHHHHHHHHH
Q 019899 293 VTPGSAC--HCI---------EPGWFRCCFTS--LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 293 v~~g~~~--~~~---------~~~~iRi~~~~--~~~~~l~~~l~~l~~~~~~ 332 (334)
+.|+..| +.. ..+++|++++. .+++++++++++|++++++
T Consensus 389 ~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l~~ 441 (467)
T 2oqx_A 389 AVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_dssp CEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHHHHS
T ss_pred ecccccccccccccccccccCccCeEEEEecCCCCCHHHHHHHHHHHHHHHhh
Confidence 9985532 210 13789999984 6899999999999999865
No 203
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.94 E-value=2e-26 Score=205.97 Aligned_cols=286 Identities=15% Similarity=0.185 Sum_probs=193.4
Q ss_pred hhhhcCCCCCCCCcEEEecCcHHHHHHHHHHh-cCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHH
Q 019899 6 SQVLGQAVSFDPSQIVLTAGATPAVEILCFCL-ADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITAL 84 (334)
Q Consensus 6 ~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l-~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l 84 (334)
++.+++.++. +++++++|+++|+..++.++ .++||+|+++.|+|.++...++ ..|.+++.+++++ +++.+|++++
T Consensus 42 ~~~la~~~~~--~~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~d~~~l 117 (373)
T 3frk_A 42 EQEFADYCNV--NYCIGCGNGLDALHLILKGYDIGFGDEVIVPSNTFIATALAVS-YTGAKPIFVEPDI-RTYNIDPSLI 117 (373)
T ss_dssp HHHHHHHHTS--SEEEEESCHHHHHHHHHHHTTCCTTCEEEEETTSCTHHHHHHH-HHSCEEEEECEET-TTTEECGGGT
T ss_pred HHHHHHHhCC--CeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHHH-HcCCEEEEEeccc-cccCcCHHHH
Confidence 3344433333 48999999999999999999 8999999999999999999988 8899999999853 4578899999
Q ss_pred HHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccc-cCCCCcchhhhhhhccccCC
Q 019899 85 DQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSI-FGNEEFVSMAEILEAEEVDK 163 (334)
Q Consensus 85 ~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 163 (334)
++++++ ++++|+ |+||||...+ +++|.++|+++|+++|+|++|+.+. +.+. .+. .
T Consensus 118 ~~~l~~------~~~~v~---~~n~~G~~~~---l~~i~~l~~~~~~~li~D~a~~~g~~~~~~------~~~------~ 173 (373)
T 3frk_A 118 ESAITE------KTKAII---AVHLYGQPAD---MDEIKRIAKKYNLKLIEDAAQAHGSLYKGM------KVG------S 173 (373)
T ss_dssp GGGCCT------TEEEEE---EECCTTCCCC---HHHHHHHHHHHTCEEEEECTTCTTCEETTE------ETT------S
T ss_pred HHhcCC------CCeEEE---EECCCcCccc---HHHHHHHHHHcCCEEEEECCcccCCEECCE------ecc------c
Confidence 998875 788777 6789999988 8899999999999999999998633 2111 111 1
Q ss_pred CcEEEEeccc--ccCCCCCceEEEEeecCHHHHHHHHHhhccc--------------CCChHHHHHHHHhhCChHHHHHH
Q 019899 164 DRVHIIYGLS--KDLSLPGFRTGVIYSYNESVLAAAKKLTRFC--------------SISAPTQRLLISMLSDTKFIQEY 227 (334)
Q Consensus 164 ~~~~~~~s~s--K~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~l~~~~~~~~~ 227 (334)
..++.+.||+ |.++..|. .|+++++++++.+.++.....+ ..+..........+ +.
T Consensus 174 ~~d~~~~S~~~~K~l~~~g~-gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~~-------~~ 245 (373)
T 3frk_A 174 LGDAAGFSFYPAKNLGSLGD-GGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNSRLDELQAGFLRVKL-------KY 245 (373)
T ss_dssp SSSEEEEECCTTSSSCCSSS-CEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBCCCCHHHHHHHHHHH-------HT
T ss_pred cccEEEEeCcCCCccCccce-eEEEEeCCHHHHHHHHHHHhcCcccCCccccccccCCCCHHHHHHHHHHH-------HH
Confidence 1246677866 98873354 7888887788888777654321 11222222211111 12
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccCC-CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCC-----
Q 019899 228 LETNKRRIKKLYDSFVAGLKQLGIRCSES-SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHC----- 301 (334)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~----- 301 (334)
+++..++.+++.+++.+.|++.++.+... .+....|..++-.. .+..++... |+++||.+.++.....
T Consensus 246 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~-L~~~gI~v~~~~~~~~~~~~~ 319 (373)
T 3frk_A 246 LDKWNEERRKIAQKYIAGINNPNVIIPVEADYAKHVWYTFVIRS-----EKRDELQKY-LNNNGIGTLIHYPIPIHLQQA 319 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCTTEECCCCCTTEECCCSSEEEEE-----SSHHHHHHH-HHHTTBCCBCSCSSCGGGSGG
T ss_pred HHHHHHHHHHHHHHHHHHhccCceEeccCCCCCceeeEEEEEEe-----CCHHHHHHH-HHHCCCCcccCcCCccccChH
Confidence 34455666777788888887766444322 22222221111110 024567777 5557999986652110
Q ss_pred ------C----------CCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 302 ------I----------EPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 302 ------~----------~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
. ..+.+|++++. .|++|++++++.|++...+|
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~~~ 368 (373)
T 3frk_A 320 YKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAWKLEH 368 (373)
T ss_dssp GGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC---
T ss_pred HHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHhhhh
Confidence 0 01579999986 69999999999999876554
No 204
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.94 E-value=8.4e-26 Score=207.04 Aligned_cols=287 Identities=14% Similarity=0.112 Sum_probs=180.5
Q ss_pred hhhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHH---hcCCCCeEEecCCCCCChhhhhhhcc----------Cc----
Q 019899 2 AGFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFC---LADHGNALLVPSPYYPGFDRDIRFRT----------GV---- 64 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~---l~~~gd~vl~~~p~~~~~~~~~~~~~----------g~---- 64 (334)
++++.+.. + ++++|++++|+++|+..++.. +.+ +++|++.+|+|+++........ |.
T Consensus 103 a~~l~~~~----~-~~~~v~~~~gg~eA~~~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~ 176 (453)
T 2cy8_A 103 AERIVAAF----P-SIRKLRFTGSGTETTLLALRVARAFTG-RRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPET 176 (453)
T ss_dssp HHHHHHHC----T-TCSEEEEESCHHHHHHHHHHHHHHHHC-CCEEEEECC----------------------------C
T ss_pred HHHHHhhC----C-CCCEEEEeCCHHHHHHHHHHHHHHhhC-CCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccc
Confidence 45555532 3 578999999999999999988 654 4678888899987655332011 22
Q ss_pred --EEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCC-CCCcccCC-CHHHHHHHHHHHHhcCcEEEEecccc
Q 019899 65 --ELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNP-ANPVGNII-PRETLYELLDFAREKNIHVISDEIYG 140 (334)
Q Consensus 65 --~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~ 140 (334)
+++.++. .|+++|++++++. +.++++| +++| +||||.+. +.+++++|.++|++||+++|+||+|+
T Consensus 177 ~~~~~~~~~-------~d~~~le~~l~~~---~~~~~~v-i~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~ 245 (453)
T 2cy8_A 177 TANTLLIRP-------DDIEGMREVFANH---GSDIAAF-IAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVIS 245 (453)
T ss_dssp GGGEEEECT-------TCHHHHHHHHHHH---GGGEEEE-EECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred cCceeecCC-------CCHHHHHHHHHhc---CCCEEEE-EECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcc
Confidence 1333331 3899999999753 1256655 5555 57899765 69999999999999999999999999
Q ss_pred ccccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHH-------hhcccCCChHHHHH
Q 019899 141 GSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKK-------LTRFCSISAPTQRL 213 (334)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 213 (334)
++ +.+.. ...... + . ... +.|+||.++ +|+|+||+++ ++++++.+.. ....++.|++.+.+
T Consensus 246 g~-~~g~~-~~~~~~-~---~-~~d---i~s~sK~l~-~G~~~G~v~~-~~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa 313 (453)
T 2cy8_A 246 GF-RVGNH-GMQALL-D---V-QPD---LTCLAKASA-GGLPGGILGG-REDVMGVLSRGSDRKVLHQGTFTGNPITAAA 313 (453)
T ss_dssp TT-TTCTT-HHHHHH-T---C-CCS---EEEEEGGGG-TTSSCEEEEE-CHHHHTTSSSCC---------CCCCHHHHHH
T ss_pred cc-ccCch-hhhHHh-C---C-CCc---EEEEChhhh-CCcceEEEec-hHHHHHHhccccCCCceeCCCCCCCHHHHHH
Confidence 77 43321 111111 1 1 112 348999998 6999999998 7788776654 22345678888887
Q ss_pred HHHhhCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CCcccCCCceeEEeeecCC-----c-----CC---CCCh
Q 019899 214 LISMLSD-TKFIQEYLETNKRRIKKLYDSFVAGLKQL----GIRCSESSAGLYCWADMSG-----L-----IP---SYSE 275 (334)
Q Consensus 214 ~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----g~~~~~~~~g~~~~~~~~~-----~-----~~---~~~~ 275 (334)
+.++++. . .+...++++++.+++.+.|++. ++....+..|.++|++++. . .. ....
T Consensus 314 ~~aal~~~~------~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 387 (453)
T 2cy8_A 314 AIAAIDTIL------EDDVCAKINDLGQFAREAMNHLFARKGLNWLAYGRFSGFHLMPGLPPNTTDTGSITRAEVARPDV 387 (453)
T ss_dssp HHHHHHHHH------HTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCTTEEEEEETSCTTCCCCHHHHTTCSCCCCH
T ss_pred HHHHHHHHh------hhhHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeccccccccccccccccccccH
Confidence 7776643 2 1223445555666666666543 4433223345678888874 1 00 0011
Q ss_pred hhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecCCCcccHHHHHHHHHHHHHHc
Q 019899 276 KGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 276 ~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
....++...|++ +||.+.|+ +.+|+++. .+++++++++++|++++++.
T Consensus 388 ~~~~~l~~~l~~-~Gv~v~~~--------~~~~l~~~-~t~~~i~~~l~~l~~~l~~~ 435 (453)
T 2cy8_A 388 KMIAAMRMALIL-EGVDIGGR--------GSVFLSAQ-HEREHVEHLVTTFDRVLDRL 435 (453)
T ss_dssp HHHHHHHHHHHH-TTEECBTT--------TEEECCTT-CCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-CCeEEeCC--------CCEEeecc-CCHHHHHHHHHHHHHHHHHH
Confidence 234578888665 79999653 23676643 79999999999999988753
No 205
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.94 E-value=8.5e-26 Score=201.42 Aligned_cols=278 Identities=15% Similarity=0.203 Sum_probs=195.4
Q ss_pred hhhhcCCCCCCCCcEEEecCcHHHHHHHHHHh-cCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHH
Q 019899 6 SQVLGQAVSFDPSQIVLTAGATPAVEILCFCL-ADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITAL 84 (334)
Q Consensus 6 ~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l-~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l 84 (334)
++.+++.++. +++++++|+++|+..++.++ .++||+|+++.|+|.++...+. ..|.+++.+++++ +.+.+|++++
T Consensus 41 ~~~la~~~~~--~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~~~~~~~~~~-~~G~~~~~~~~~~-~~~~~d~~~l 116 (367)
T 3nyt_A 41 EDRLADFVGA--KYCISCANGTDALQIVQMALGVGPGDEVITPGFTYVATAETVA-LLGAKPVYVDIDP-RTYNLDPQLL 116 (367)
T ss_dssp HHHHHHHHTC--SEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHH-HTTCEEEEECBCT-TTCSBCGGGT
T ss_pred HHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHHHHH-HcCCEEEEEecCC-ccCCcCHHHH
Confidence 3344433333 48999999999999999999 8999999999999999999998 8999999999853 3478999999
Q ss_pred HHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccc-cCCCCcchhhhhhhccccCC
Q 019899 85 DQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSI-FGNEEFVSMAEILEAEEVDK 163 (334)
Q Consensus 85 ~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 163 (334)
++++++ ++++|+ |+||+|...+ +++|.++|+++|++||+|++|+.+. +.+.. . .. .
T Consensus 117 ~~~i~~------~~~~v~---~~~~~G~~~~---~~~i~~la~~~~~~li~D~a~~~g~~~~~~~---~---~~-----~ 173 (367)
T 3nyt_A 117 EAAITP------RTKAII---PVSLYGQCAD---FDAINAIASKYGIPVIEDAAQSFGASYKGKR---S---CN-----L 173 (367)
T ss_dssp GGGCCT------TEEEEC---CBCGGGCCCC---HHHHHHHHHHTTCCBEEECTTTTTCEETTEE---T---TS-----S
T ss_pred HHhcCc------CCcEEE---eeCCccChhh---HHHHHHHHHHcCCEEEEECccccCCeECCee---c---cC-----C
Confidence 999865 788666 7789999888 9999999999999999999997532 22211 1 10 1
Q ss_pred CcEEEEecc--cccCCCCCceEEEEeecCHHHHHHHHHhhcc--------------cCCChHHHHHHHHhhCChHHHHHH
Q 019899 164 DRVHIIYGL--SKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--------------CSISAPTQRLLISMLSDTKFIQEY 227 (334)
Q Consensus 164 ~~~~~~~s~--sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~l~~~~~~~~~ 227 (334)
+ ++.+.|| +|.++.+|. .|+++++++++.+.++..... +..++....+....+..
T Consensus 174 ~-di~~~Sf~~~K~l~~~g~-gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~------- 244 (367)
T 3nyt_A 174 S-TVACTSFFPSAPLGCYGD-GGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPKLEI------- 244 (367)
T ss_dssp S-SEEEEECCTTSSSCCSSC-CEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBCCCCHHHHHHHHHHHHT-------
T ss_pred C-CEEEEECCCCCcCCCcCc-eeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCCCccHHHHHHHHHHHHH-------
Confidence 2 5777786 899985476 888888788898888765432 23444444443333322
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccCC-Ccee----EEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCC-
Q 019899 228 LETNKRRIKKLYDSFVAGLKQLGIRCSES-SAGL----YCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHC- 301 (334)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~-~~g~----~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~- 301 (334)
+++..++.+++.+++.+.|++.++.+... .+.. .+.+.++ +..++... |+++||.+.++.....
T Consensus 245 ~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~l~~~-L~~~GI~~~~~~~~~~~ 314 (367)
T 3nyt_A 245 FEEEIALRQKVAAEYDLSLKQVGIGTPFIEVNNISVYAQYTVRMD---------NRESVQAS-LKAAGVPTAVHYPIPLN 314 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTEECCCSSEEEECS---------SHHHHHHH-HHHHTCCCBCSCSSCGG
T ss_pred HHHHHHHHHHHHHHHHHHhccCCeeccCCCCCCceeeEEEEEEeC---------CHHHHHHH-HHHCCCceeccCCCccc
Confidence 23344555666778888888877654422 2211 1223333 23567777 5557999876542100
Q ss_pred -------C----------CCCeEEEEecC-CCcccHHHHHHHHHHH
Q 019899 302 -------I----------EPGWFRCCFTS-LTHEDIPLVIERIQKV 329 (334)
Q Consensus 302 -------~----------~~~~iRi~~~~-~~~~~l~~~l~~l~~~ 329 (334)
. ..+.+|+++.. ++++|++++++.+++.
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 315 KQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNL 360 (367)
T ss_dssp GSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred cChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 0 01468999885 6999999999998764
No 206
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.94 E-value=7.7e-26 Score=205.86 Aligned_cols=285 Identities=15% Similarity=0.088 Sum_probs=179.1
Q ss_pred CCCcEEEecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChhhhhhhccC-------------------cEEEEEeCCCC
Q 019899 16 DPSQIVLTAGATPAVEILCFCLA--DHGNALLVPSPYYPGFDRDIRFRTG-------------------VELIPVHCRST 74 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~~g-------------------~~v~~v~~~~~ 74 (334)
..+++++++|+++++..++.... .++++|++.+++|++.........+ ..+..++.
T Consensus 108 ~~~~v~~~~sGsea~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 184 (429)
T 4e77_A 108 TMDMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTY--- 184 (429)
T ss_dssp TCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECT---
T ss_pred CCCEEEEeCcHHHHHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCC---
Confidence 57899999999999999988542 3567899999998876542110111 11222221
Q ss_pred CCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCC-cccCCC-HHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchh
Q 019899 75 DNFAFSITALDQAFNQARKRGVKVRGILICNPANP-VGNIIP-RETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSM 152 (334)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~np-tG~~~~-~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~ 152 (334)
.|+++|++++++. +.+++ +++++|.|+ +|.+.+ .+.+++|.++|++||+++|+||+|.++ ..+... ..
T Consensus 185 ----~d~~~le~~l~~~---~~~~~-~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~~-~~ 254 (429)
T 4e77_A 185 ----NDLASVRQAFEQY---PQEVA-CIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALAG-AQ 254 (429)
T ss_dssp ----TCHHHHHHHHHHS---TTTEE-EEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTTC-HH
T ss_pred ----CCHHHHHHHHHhc---CCCEE-EEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcch-HH
Confidence 2789999998752 12455 556677554 455443 556999999999999999999999987 444321 11
Q ss_pred hhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHH-----hhcccCCChHHHHHHHHhhCChHHHHHH
Q 019899 153 AEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKK-----LTRFCSISAPTQRLLISMLSDTKFIQEY 227 (334)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 227 (334)
... . . ... +.|+||.++ +|+|+||+++ ++++++.+.. ....++.+++.+.++.+.++..+. ++.
T Consensus 255 ~~~-~---~-~pd---i~t~sK~~~-~G~~~G~~~~-~~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~ 323 (429)
T 4e77_A 255 DYY-H---V-IPD---LTCLGKIIG-GGMPVGAFGG-RREVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQ-VGV 323 (429)
T ss_dssp HHT-T---C-CCS---EEEEEGGGG-TTSCCEEEEE-CHHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTS-TTH
T ss_pred Hhc-C---C-CCC---eeeeccccc-CCCCeEEEEE-CHHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHh-cCH
Confidence 111 1 1 111 348999998 8999999998 8888887764 234467888888887777652210 112
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccCCCceeEEeeecCCcCCC--------CChhhHHHHHHHHHHhcCeEEcCCCCc
Q 019899 228 LETNKRRIKKLYDSFVAGLKQLGIRCSESSAGLYCWADMSGLIPS--------YSEKGELELWDKLLNIAKINVTPGSAC 299 (334)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~--------~~~~~~~~~~~~ll~~~gi~v~~g~~~ 299 (334)
.++.++.....++.+.+.+.+.++....+..|.++|++++..... .......++...|++ +||.+.|+..
T Consensus 324 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~- 401 (429)
T 4e77_A 324 YETLTELTDSLATGLRHAAKEENIPLVVNHVGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLMLE-EGVYLAPSAF- 401 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHHH-TTEECCSSTT-
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeEEEEEEccCcccccccccccccHHHHHHHHHHHHH-CCeEEeecCC-
Confidence 222222222333333333344455444444577788888753110 011233577788555 7999998652
Q ss_pred CCCCCCeEEEEecCCCcccHHHHHHHHHHHHHH
Q 019899 300 HCIEPGWFRCCFTSLTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 300 ~~~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~ 332 (334)
..+|+++. .+++++++++++|++++++
T Consensus 402 -----~~~~~~~~-~t~e~i~~~l~~l~~~l~~ 428 (429)
T 4e77_A 402 -----EAGFMSLA-HSNEDIQKTVNAARRCFAK 428 (429)
T ss_dssp -----SCEECCTT-CCHHHHHHHHHHHHHHHTT
T ss_pred -----CCEEEecc-CCHHHHHHHHHHHHHHHHh
Confidence 34666544 7999999999999999865
No 207
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.94 E-value=7.7e-25 Score=196.77 Aligned_cols=268 Identities=14% Similarity=0.111 Sum_probs=186.7
Q ss_pred CcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhh----ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 18 SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRF----RTGVELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~----~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
+++++++++++|+.. +..++++||+|+++.|+|.+....+.. ..|.+++.++.. |++++++++++
T Consensus 83 ~~~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~--- 151 (400)
T 3nmy_A 83 TRAFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDLT-------DPAAFKAAIRA--- 151 (400)
T ss_dssp SEEEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEECTT-------SHHHHHHHCCT---
T ss_pred CCEEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEECCC-------CHHHHHHHhcc---
Confidence 467888888999998 567889999999999999976665441 359999999852 78999999875
Q ss_pred cCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEeccc
Q 019899 94 RGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLS 173 (334)
Q Consensus 94 ~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s 173 (334)
++++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|+...+. ..+ . .+.++++.|++
T Consensus 152 ---~~~~v~~e~~~np~G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~-------~~~-~-----~g~div~~S~s 212 (400)
T 3nmy_A 152 ---DTKMVWIETPTNPMLKLVD---IAAIAVIARKHGLLTVVDNTFASPMLQ-------RPL-S-----LGADLVVHSAT 212 (400)
T ss_dssp ---TEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHC-------CGG-G-----GTCSEEEEETT
T ss_pred ---CCCEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccC-------Chh-h-----cCCcEEEecCc
Confidence 7999999999999999999 999999999999999999998742221 111 1 35678999999
Q ss_pred ccCCCCCceEEE--EeecCHHHHHHHHHhhccc--CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 019899 174 KDLSLPGFRTGV--IYSYNESVLAAAKKLTRFC--SISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL 249 (334)
Q Consensus 174 K~~~~~g~r~g~--i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 249 (334)
|.++.+|.++|+ +++.++++.+.++.....+ ..++.....+...++.. ..+.++..++++.+.+.|++.
T Consensus 213 K~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~~l-------~~r~~~~~~~a~~l~~~L~~~ 285 (400)
T 3nmy_A 213 KYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSIGGVQGPFDSFLALRGLKTL-------PLRMRAHCENALALAQWLETH 285 (400)
T ss_dssp TTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHHCCBCCHHHHHHHHHHHTTH-------HHHHHHHHHHHHHHHHHHTTC
T ss_pred cccCCCCCcceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhHhHH-------HHHHHHHHHHHHHHHHHHHcC
Confidence 999867766644 5556888888887654443 44555555555555442 334455677778888888775
Q ss_pred C-Cccc-C----------------CCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCC----------
Q 019899 250 G-IRCS-E----------------SSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHC---------- 301 (334)
Q Consensus 250 g-~~~~-~----------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---------- 301 (334)
. +..+ . ...|.+++++++.. ......+.+. ++-.++.+..|..++.
T Consensus 286 p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~-----~~~~~~~~~~-l~~~~~~~s~G~~~sl~~~p~~~~~~ 359 (400)
T 3nmy_A 286 PAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGG-----FDAAKRFCEK-TELFTLAESLGGVESLVNHPAVMTHA 359 (400)
T ss_dssp TTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTH-----HHHHHHHHHH-CSSSEECSCCCSSSCEEECTTTTTTT
T ss_pred CCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCc-----HHHHHHHHHc-CCcceEecCCCCCcceeeCccccccc
Confidence 2 2211 1 12356778888642 0122334444 3334444444443211
Q ss_pred -----------CCCCeEEEEecCCCcccHHHHHHHHHHHHH
Q 019899 302 -----------IEPGWFRCCFTSLTHEDIPLVIERIQKVAE 331 (334)
Q Consensus 302 -----------~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~ 331 (334)
..++.+|+|++ .|+.+++++.|.++++
T Consensus 360 ~~~~~~~~~~gi~~~liRlsvG---le~~~dli~dl~~al~ 397 (400)
T 3nmy_A 360 SIPVARREQLGISDALVRLSVG---IEDLGDLRGDLERALV 397 (400)
T ss_dssp TSCHHHHHHHTCCTTEEEEECC---SSCHHHHHHHHHHHHC
T ss_pred cCCHHHHHhcCCCcCeEEEEeC---cCCHHHHHHHHHHHHh
Confidence 12468999999 6677778888888775
No 208
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.94 E-value=6.4e-25 Score=204.14 Aligned_cols=305 Identities=12% Similarity=0.171 Sum_probs=206.0
Q ss_pred hhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc-------C-CCC------eEEecCCCCCChhhhhhhccCc---E
Q 019899 3 GFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLA-------D-HGN------ALLVPSPYYPGFDRDIRFRTGV---E 65 (334)
Q Consensus 3 ~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~-------~-~gd------~vl~~~p~~~~~~~~~~~~~g~---~ 65 (334)
+++.+.++ .+.+++++++|+|+++..++.++. + +|+ +|+++.+.|+++...++ ..|. +
T Consensus 155 ~~la~l~g----~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~-~~g~g~~~ 229 (515)
T 2jis_A 155 RKLRALVG----WSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAA-FLGLGTDS 229 (515)
T ss_dssp HHHHHHHT----CSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHH-HTTSCGGG
T ss_pred HHHHHHhC----CCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHHHHHH-HcCCCCCc
Confidence 45555554 457899999999999988888763 2 565 89999999999999888 7777 8
Q ss_pred EEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccC
Q 019899 66 LIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFG 145 (334)
Q Consensus 66 v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~ 145 (334)
++.+|++ +++.+|+++|++++++...++.++++|++++|+||||.+.| +++|.++|+++|+++++|++|+.+.+.
T Consensus 230 v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~---l~~I~~la~~~g~~l~vD~a~~~~~~~ 304 (515)
T 2jis_A 230 VRVVKAD--ERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDP---LEAIADVCQRHGLWLHVDAAWGGSVLL 304 (515)
T ss_dssp EEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHHHHHTCEEEEEETTGGGGGG
T ss_pred EEEEecC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccC---HHHHHHHHHHcCCeEEEehhhhhHHHh
Confidence 9999973 46789999999999876666667999999999999999999 999999999999999999999987654
Q ss_pred CCCcch-hhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCH-HHHHHHHH-hhcc--------------c--C-
Q 019899 146 NEEFVS-MAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNE-SVLAAAKK-LTRF--------------C--S- 205 (334)
Q Consensus 146 ~~~~~~-~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~-~~~~~~~~-~~~~--------------~--~- 205 (334)
...+.. +..+ .+.++++.|++|+++ .+.++|+++++++ ++.+.... ...+ + +
T Consensus 305 ~~~~~~~~~g~-------~~aD~v~~s~hK~l~-~p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 376 (515)
T 2jis_A 305 SQTHRHLLDGI-------QRADSVAWNPHKLLA-AGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVV 376 (515)
T ss_dssp CTTTGGGGTTG-------GGCSEEEECTTSTTC-CCSCCEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGCS
T ss_pred ChhhHhhcCCC-------ccCCEEEECcccccC-CCCCeeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCCC
Confidence 332221 1111 234577889999987 3457899998665 45443211 0000 0 0
Q ss_pred -----CChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCC-CceeEEeeecCCcCCC----CC
Q 019899 206 -----ISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSES-SAGLYCWADMSGLIPS----YS 274 (334)
Q Consensus 206 -----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~-~~g~~~~~~~~~~~~~----~~ 274 (334)
...+.+.++..++. .+.+.+..++..++++++.+.|++. ++++..+ ..+.++|...|..... ..
T Consensus 377 ~~~rr~~al~~~~~l~~lg-----~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~p~~~~~~~~~~~ 451 (515)
T 2jis_A 377 QCGRRVDCLKLWLMWKAQG-----DQGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVNVCFWFVPPSLRGKQESPD 451 (515)
T ss_dssp CSSCCCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCCSSSEEEEEECCGGGTTCTTSTT
T ss_pred CCCCcccHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCeeEEEEEEeCccccccccchh
Confidence 01222233333321 3345677888889999999999987 8887653 3455554343432111 00
Q ss_pred hhh-----HHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEe-cC-CCcccHHHHHHHHHHHHHH
Q 019899 275 EKG-----ELELWDKLLNIAKINVTPGSACHCIEPGWFRCCF-TS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 275 ~~~-----~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~-~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
... ...+...+.+ .|+.+...... ....+++|+++ .. .+++|++++++.|++++++
T Consensus 452 ~~~~l~~~~~~l~~~l~~-~G~~~~~~~~~-~~~~~~lRis~~~~~~t~edid~~~~~l~~~~~~ 514 (515)
T 2jis_A 452 YHERLSKVAPVLKERMVK-EGSMMIGYQPH-GTRGNFFRVVVANSALTCADMDFLLNELERLGQD 514 (515)
T ss_dssp HHHHHHTHHHHHHHHHHH-HTSCEEEEEEE-TTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHh-cCCEEEEEEEE-CCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 000 1124555444 57544211100 01246899999 44 5899999999999998764
No 209
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.94 E-value=1.2e-25 Score=204.32 Aligned_cols=278 Identities=15% Similarity=0.126 Sum_probs=187.0
Q ss_pred CCCcEEEecCcHHHHHHHHHH---hcCCCCeEEecCCCCCChhhhhhhc-------------cCc------EEEEEeCCC
Q 019899 16 DPSQIVLTAGATPAVEILCFC---LADHGNALLVPSPYYPGFDRDIRFR-------------TGV------ELIPVHCRS 73 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~---l~~~gd~vl~~~p~~~~~~~~~~~~-------------~g~------~v~~v~~~~ 73 (334)
+++++++++|+++|+..++.. +. ++++|++.+|+|+++...+... .|. +++.++.
T Consensus 107 ~~~~v~~~~~g~ea~~~al~~ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-- 183 (424)
T 2e7u_A 107 FVDLVRFVNSGTEATMSALRLARGYT-GRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-- 183 (424)
T ss_dssp TCCEEEEESSHHHHHHHHHHHHHHHH-CCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT--
T ss_pred CCCEEEEeCCHHHHHHHHHHHHHHhh-CCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC--
Confidence 578999999999999999886 44 4578999999998865532201 121 3444442
Q ss_pred CCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCC-CcccCC-CHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcch
Q 019899 74 TDNFAFSITALDQAFNQARKRGVKVRGILICNPAN-PVGNII-PRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVS 151 (334)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~n-ptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~ 151 (334)
.|+++|++++++. +.+++ +++++|.| +||.+. +.+.+++|.++ ++||+++|+||+|.++ ..+... .
T Consensus 184 -----~d~~~le~~l~~~---~~~~~-~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~~-~ 251 (424)
T 2e7u_A 184 -----NDPEGLREVLKRR---GEEIA-AIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFGG-A 251 (424)
T ss_dssp -----TCHHHHHHHHHHH---GGGEE-EEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTTH-H
T ss_pred -----CCHHHHHHHHHhC---CCCEE-EEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchhH-H
Confidence 3789999998752 11455 55667755 589766 68899999999 9999999999999987 333211 1
Q ss_pred hhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh-----hcccCCChHHHHHHHHhhCChHHHHH
Q 019899 152 MAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL-----TRFCSISAPTQRLLISMLSDTKFIQE 226 (334)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~ 226 (334)
.+..+ . ..+ +.|+||+++ +|+|+||+++ ++++++.+... ...++.|++++.++.++++.. ++
T Consensus 252 -~~~~~---~-~~d---i~s~sK~l~-~G~~~G~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~---~~ 318 (424)
T 2e7u_A 252 -TELLG---L-KPD---LVTLGKILG-GGLPAAAYAG-RREIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELL---EE 318 (424)
T ss_dssp -HHHHT---C-CCS---EEEECGGGG-TTSSCEEEEE-CHHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHH---HH
T ss_pred -HHHhC---C-Ccc---hhhhhhhhh-CCcceEEEEE-cHHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHH---Hh
Confidence 11111 1 122 338999999 6999999998 78888777651 234567888888777776532 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC----CCcccCCCceeEEeeecCCcC-CC------CChhhHHHHHHHHHHhcCeEEcC
Q 019899 227 YLETNKRRIKKLYDSFVAGLKQL----GIRCSESSAGLYCWADMSGLI-PS------YSEKGELELWDKLLNIAKINVTP 295 (334)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~l~~~----g~~~~~~~~g~~~~~~~~~~~-~~------~~~~~~~~~~~~ll~~~gi~v~~ 295 (334)
..+..++++++.+++.+.|++. ++....+..|.++|++++... .. .......++...|+ ++||.+.|
T Consensus 319 -~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~ 396 (424)
T 2e7u_A 319 -NPGYYAYLEDLGARLEAGLKEVLKEKGLPHTVNRVGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLL-DRGIYWPP 396 (424)
T ss_dssp -CTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHH-TTTEECCS
T ss_pred -ccHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeeceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHH-HCCeEEec
Confidence 1345566666777777777653 553222334567888887521 00 01123457788866 58999998
Q ss_pred CCCcCCCCCCeEEEEecCCCcccHHHHHHHHHHHH
Q 019899 296 GSACHCIEPGWFRCCFTSLTHEDIPLVIERIQKVA 330 (334)
Q Consensus 296 g~~~~~~~~~~iRi~~~~~~~~~l~~~l~~l~~~~ 330 (334)
+.. ..+|+++. .+++++++++++|++++
T Consensus 397 ~~~------~~~~~~~~-~t~~~i~~~l~~l~~~l 424 (424)
T 2e7u_A 397 SNF------EAAFLSVA-HREEDVEKTLEALRKAL 424 (424)
T ss_dssp SSS------SCEECCTT-CCHHHHHHHHHHHHHHC
T ss_pred cCC------CceEeecc-CCHHHHHHHHHHHHHhC
Confidence 752 34677654 79999999999998763
No 210
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.94 E-value=5.8e-26 Score=207.71 Aligned_cols=281 Identities=15% Similarity=0.098 Sum_probs=192.0
Q ss_pred CCCCcEEEecCcHHHHHHHHHHhc---C-----------CCCeEEecCCCCCChhhhhhhccC-------------cEEE
Q 019899 15 FDPSQIVLTAGATPAVEILCFCLA---D-----------HGNALLVPSPYYPGFDRDIRFRTG-------------VELI 67 (334)
Q Consensus 15 ~~~~~i~~~~g~~~~~~~~~~~l~---~-----------~gd~vl~~~p~~~~~~~~~~~~~g-------------~~v~ 67 (334)
.+.++|++++|+++|+..++..+. + +||+|++.+|+|+++........| .+++
T Consensus 117 ~~~~~v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (449)
T 2cjg_A 117 PALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRI 196 (449)
T ss_dssp TTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEE
T ss_pred CCCCEEEEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcE
Confidence 467899999999999999987542 2 289999999999876554321222 1566
Q ss_pred EEeCCCCCCc--------cccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcc-cCCCHHHHHHHHHHHHhcCcEEEEecc
Q 019899 68 PVHCRSTDNF--------AFSITALDQAFNQARKRGVKVRGILICNPANPVG-NIIPRETLYELLDFAREKNIHVISDEI 138 (334)
Q Consensus 68 ~v~~~~~~~~--------~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG-~~~~~~~l~~i~~~~~~~~~~vi~D~~ 138 (334)
.+|.++...+ ..++++|++++++. ..++++|++..++||+| ...+.+++++|.++|++||+++|+||+
T Consensus 197 ~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~---~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv 273 (449)
T 2cjg_A 197 DAPYMRPGLDEPAMAALEAEALRQARAAFETR---PHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEV 273 (449)
T ss_dssp CCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHS---TTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECT
T ss_pred EEcCCCchhhccccchhhHHHHHHHHHHHHhc---CCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEecc
Confidence 6665320011 25667788888631 13677655444478999 588999999999999999999999999
Q ss_pred ccccccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHH-------HhhcccCCChHHH
Q 019899 139 YGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAK-------KLTRFCSISAPTQ 211 (334)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~-------~~~~~~~~~~~~~ 211 (334)
|.++.+.|..+ .+... + . ... +.|+||.+ |+||+++ ++++++.+. .....++.|++.+
T Consensus 274 ~~g~g~~g~~~-~~~~~-~---~-~~d---i~t~sK~l-----~iG~~~~-~~~~~~~l~~~~~~~~~~~~t~~~n~~~~ 338 (449)
T 2cjg_A 274 QTGCGLTGTAW-AYQQL-D---V-APD---IVAFGKKT-----QVCGVMA-GRRVDEVADNVFAVPSRLNSTWGGNLTDM 338 (449)
T ss_dssp TTTTTTTSSSS-THHHH-T---C-CCS---EEEECGGG-----SSEEEEE-CGGGGGSTTCTTTSTTSSCCSSSSCHHHH
T ss_pred ccCCCccCcce-eeccc-C---C-Cce---EEEecCcc-----cEEEEEE-CHHHhhhhhhcccCCcccccCCCCCHHHH
Confidence 99876655421 11111 1 1 122 23789988 5899998 667776522 1223466788888
Q ss_pred HHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC----C--CcccCCCceeEEeeecCCcCCCCChhhHHHHHHHH
Q 019899 212 RLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL----G--IRCSESSAGLYCWADMSGLIPSYSEKGELELWDKL 285 (334)
Q Consensus 212 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----g--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (334)
.++.++++..+ + ....++++++.+++.+.|+++ . +....+. |.+++++++.. .+..++...|
T Consensus 339 ~aa~aal~~~~---~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~~-g~~~~~~~~~~------~~~~~~~~~l 406 (449)
T 2cjg_A 339 VRARRILEVIE---A--EGLFERAVQHGKYLRARLDELAADFPAVVLDPRGR-GLMCAFSLPTT------ADRDELIRQL 406 (449)
T ss_dssp HHHHHHHHHHH---H--HTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEEEEE-TTEEEEECSSH------HHHHHHHHHH
T ss_pred HHHHHHHHHHH---h--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEeec-cEEEEEEECCh------HHHHHHHHHH
Confidence 88887775322 1 234566677777777777654 2 3233444 44556787642 2345788886
Q ss_pred HHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 286 LNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 286 l~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
++ +||.+.|+. ++++|++++. .+++++++++++|++++++
T Consensus 407 ~~-~Gv~v~~~g------~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 447 (449)
T 2cjg_A 407 WQ-RAVIVLPAG------ADTVRFRPPLTVSTAEIDAAIAAVRSALPV 447 (449)
T ss_dssp HH-TTEECEEET------TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HH-CCeEEecCC------CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 65 899998863 4789998764 6999999999999999875
No 211
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.94 E-value=3e-25 Score=204.04 Aligned_cols=302 Identities=14% Similarity=0.121 Sum_probs=207.7
Q ss_pred hhhhhhhhcCCCCCC-------CCcEEEecCcHHHHHHHHHHhcC-------------------CCCeEEecCCCCCChh
Q 019899 2 AGFMSQVLGQAVSFD-------PSQIVLTAGATPAVEILCFCLAD-------------------HGNALLVPSPYYPGFD 55 (334)
Q Consensus 2 ~~~~~~~~~~~~~~~-------~~~i~~~~g~~~~~~~~~~~l~~-------------------~gd~vl~~~p~~~~~~ 55 (334)
++|+.+.++ .+.+ ....++|+|+|+++..++.+... +++.|+++.++|.++.
T Consensus 119 ~~~l~~~~g--~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~ 196 (475)
T 3k40_A 119 MDWLGKMLE--LPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQAHSSVE 196 (475)
T ss_dssp HHHHHHHTT--CCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETTSCHHHH
T ss_pred HHHHHHHhC--CCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEECCCchHHHH
Confidence 456676655 3211 13689999999999888777521 3468999999999999
Q ss_pred hhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEE
Q 019899 56 RDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVIS 135 (334)
Q Consensus 56 ~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~ 135 (334)
..+. ..|.+++.+|++ .++ +|+++|+++|++....+..+.+++++.++|++|.+.+ +++|.++|++||+++++
T Consensus 197 ~~~~-~~g~~~~~v~~d--~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~---l~~I~~la~~~~~~lhv 269 (475)
T 3k40_A 197 RAGL-LGGVKLRSVQSE--NHR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDY---LDECGPVGNKHNLWIHV 269 (475)
T ss_dssp HHHH-HHTCEEEEECCB--TTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHHHHTTCEEEE
T ss_pred HHHH-HcCCceEEEECC--CCC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCC---HHHHHHHHHHhCCeEEE
Confidence 9998 889999999983 456 9999999999986655556888999999999999988 99999999999999999
Q ss_pred eccccccccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHH-HHHHHhhcccC---------
Q 019899 136 DEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVL-AAAKKLTRFCS--------- 205 (334)
Q Consensus 136 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~-~~~~~~~~~~~--------- 205 (334)
|++|+...+....... ... +. ...+.+..++||+++ .+..+|+++.+++... +.+.....+..
T Consensus 270 D~A~~~~~~~~~~~~~---~~~--gi-~~~Ds~~~~~hK~l~-~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~ 342 (475)
T 3k40_A 270 DAAYAGSAFICPEYRH---LMK--GI-ESADSFNFNPHKWML-VNFDCSAMWLKDPSWVVNAFNVDPLYLKHDMQGSAPD 342 (475)
T ss_dssp ECTTGGGGGGSGGGGG---GGT--TG-GGCSEEEECHHHHSS-CCSSCEEEEESSGGGC---------------------
T ss_pred eHHhHHHHHhCHhhHH---Hhc--Cc-ccCCEEEECchhccC-CCCceEEEEEeCHHHHHHHhcCCccccCCCcCCCCCC
Confidence 9999875432211111 110 00 123567789999886 4456788887666542 22221111100
Q ss_pred -------CC----hHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCceeEEeeecCCcCCCC
Q 019899 206 -------IS----APTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSESSAGLYCWADMSGLIPSY 273 (334)
Q Consensus 206 -------~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~ 273 (334)
.+ ...+.++..++ ..+.+.++.++..++++++.+.|++. ++++..+....+++++++..
T Consensus 343 ~~~~~~~~sr~~~~l~l~~al~~~-----g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~~~~~iv~f~~~~~---- 413 (475)
T 3k40_A 343 YRHWQIPLGRRFRALKLWFVLRLY-----GVENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINMGLVCFRLKGS---- 413 (475)
T ss_dssp ------CCCGGGTHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSCCBTTEEEEEESSC----
T ss_pred cccccccCCCcccHHHHHHHHHHH-----hHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEeCCc----
Confidence 01 11222222222 13446778888999999999999997 88887665555566776532
Q ss_pred ChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC--CCcccHHHHHHHHHHHHHH
Q 019899 274 SEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS--LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 274 ~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~--~~~~~l~~~l~~l~~~~~~ 332 (334)
.....++.++|.++.++.+.|+...+ ..++|+++++ .+++|+++++++|+++.++
T Consensus 414 -~~~~~~l~~~L~~~g~~~~~~~~~~g---~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~ 470 (475)
T 3k40_A 414 -NERNEALLKRINGRGHIHLVPAKIKD---VYFLRMAICSRFTQSEDMEYSWKEVSAAADE 470 (475)
T ss_dssp -HHHHHHHHHHHHHHTSCBCEEEEETT---EEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred -hHHHHHHHHHHHhCCcEEEEeeEECC---EEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 12346788886665445555544332 4689999874 4889999999999998875
No 212
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.93 E-value=5e-25 Score=198.75 Aligned_cols=206 Identities=12% Similarity=0.104 Sum_probs=148.9
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhh---hccCcEEEEEeCCCCCCccccH
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIR---FRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~---~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
+++.+++..+ .+++++++|+++|++.++.+++++||+|+++.+.|++....+. ...|.+++.++. .|+
T Consensus 87 le~~lA~l~g--~~~~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~-------~d~ 157 (415)
T 2fq6_A 87 LQQAMCELEG--GAGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDP-------LIG 157 (415)
T ss_dssp HHHHHHHHHT--CSEEEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECT-------TCG
T ss_pred HHHHHHHHhC--CCeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECC-------CCH
Confidence 3344443333 3467888999999999999999999999999999998776542 157999999885 278
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHh--cCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFARE--KNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~--~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
+++++++++ ++++|++++|+||+|.+.| +++|.++|++ +|+++++|++|+.... ..++ .
T Consensus 158 ~~le~ai~~------~tklV~~e~~~NptG~v~d---l~~I~~la~~~~~g~~livD~a~a~~~~----~~p~----~-- 218 (415)
T 2fq6_A 158 ADIVKHLQP------NTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVL----FKAL----D-- 218 (415)
T ss_dssp GGGGGGCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTS----SCGG----G--
T ss_pred HHHHHhhcc------CCcEEEEECCCCCCCEeec---HHHHHHHHHhhcCCCEEEEECCCccccc----CCcc----c--
Confidence 889998876 7999999999999999999 8999999999 9999999999975322 1111 1
Q ss_pred ccCCCcEEEEecccccCCCCCce-EEEEeecCHHHHHHHHHhhcccC--CChHHHHHHHHhhCChHHHHHHHHHHHHHHH
Q 019899 160 EVDKDRVHIIYGLSKDLSLPGFR-TGVIYSYNESVLAAAKKLTRFCS--ISAPTQRLLISMLSDTKFIQEYLETNKRRIK 236 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~g~r-~g~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 236 (334)
.+.++++.|++|.++.+|.+ .|++++ ++++++.++.....++ .++.....+...+ +.+..+.++..
T Consensus 219 ---~g~Div~~S~sK~lg~~g~~~~G~l~~-~~~~~~~l~~~~~~~G~~~~~~~a~~~~~~l-------~~l~~r~~~~~ 287 (415)
T 2fq6_A 219 ---FGIDVSIQAATKYLVGHSDAMIGTAVC-NARCWEQLRENAYLMGQMVDADTAYITSRGL-------RTLGVRLRQHH 287 (415)
T ss_dssp ---GTCSEEEEETTTTTTCSSSCCCEEEEE-CTTTHHHHHHHHHHTTCCCCHHHHHHHHHHH-------HHHHHHHHHHH
T ss_pred ---cCCeEEEEeCccccCCCCCceEEEEEe-CHHHHHHHHHHHHhcCCCCCHHHHHHHHhhh-------hHHHHHHHHHH
Confidence 45678899999999877754 689988 5567777765543322 2333222222222 12234445556
Q ss_pred HHHHHHHHHHHhC
Q 019899 237 KLYDSFVAGLKQL 249 (334)
Q Consensus 237 ~~~~~~~~~l~~~ 249 (334)
+++..+.+.|++.
T Consensus 288 ~n~~~l~~~L~~~ 300 (415)
T 2fq6_A 288 ESSLKVAEWLAEH 300 (415)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHcC
Confidence 6777777777765
No 213
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.93 E-value=2.4e-24 Score=192.33 Aligned_cols=289 Identities=17% Similarity=0.196 Sum_probs=192.5
Q ss_pred hhhhhh-cCCCCCCCCcEEEecCcHHHHHHHHHHh-cCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccH
Q 019899 4 FMSQVL-GQAVSFDPSQIVLTAGATPAVEILCFCL-ADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 4 ~~~~~~-~~~~~~~~~~i~~~~g~~~~~~~~~~~l-~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
-+++.+ ++.++ ..+++++++|+++++..++.++ +++||+|+++.|+|.++...+. ..|.+++.+++++ +++.+|+
T Consensus 40 ~l~~~~~a~~~g-~~~~~v~~~sgt~al~~al~~l~~~~Gd~Vi~~~~~~~~~~~~~~-~~G~~~~~v~~~~-~~~~~d~ 116 (377)
T 3ju7_A 40 RFEQTIMSGFFQ-NRGAVTTVANATLGLMAAIQLKKRKKGKYALMPSFTFPATPLAAI-WCGLEPYFIDISI-DDWYMDK 116 (377)
T ss_dssp HHHHHHHHHTST-TCSEEEEESCHHHHHHHHHHHHSCTTCCEEEEESSSCTHHHHHHH-HTTCEEEEECBCT-TTCSBCH
T ss_pred HHHHHHHHHHhC-CCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHHH-HcCCEEEEEecCC-ccCCcCH
Confidence 345555 65555 3678999999999999999998 8999999999999999999988 8999999999853 5678999
Q ss_pred HHHHHHHHHHHHcCCc--eeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 82 TALDQAFNQARKRGVK--VRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~--~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
+++++++++. + +++|+ |+||+|...+ +++|.++|+ +|++||+|++|+...... ...+..
T Consensus 117 ~~l~~~i~~~-----~~~tk~v~---~~~~~G~~~~---~~~i~~la~-~~~~vi~D~a~a~g~~~~-----~~~~g~-- 177 (377)
T 3ju7_A 117 TVLWDKIEEL-----KEEVAIVV---PYATFGSWMN---LEEYEELEK-KGVPVVVDAAPGFGLMNG-----GMHYGQ-- 177 (377)
T ss_dssp HHHHHHHHHH-----GGGEEEEC---CBCGGGBCCC---CHHHHHHHH-TTCCBEEECTTCTTCEET-----TEETTT--
T ss_pred HHHHHHHhcC-----CCCceEEE---EECCCCCccC---HHHHHHHHh-cCCEEEEECCCccCCeEC-----CEeccC--
Confidence 9999998432 5 88776 6788999999 888888999 999999999997533111 011100
Q ss_pred ccCCCcEEEEec--ccccCCCCCceEEEEeecCHHHHHHHHHhhcc--------------cCCChHHHHHHHHhhCChHH
Q 019899 160 EVDKDRVHIIYG--LSKDLSLPGFRTGVIYSYNESVLAAAKKLTRF--------------CSISAPTQRLLISMLSDTKF 223 (334)
Q Consensus 160 ~~~~~~~~~~~s--~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~l~~~~~ 223 (334)
....+.+.| .+|.++ +| +.|+++++++++.+.++..... +..+..........++
T Consensus 178 ---~~~d~~~~S~~~~K~l~-~g-~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~---- 248 (377)
T 3ju7_A 178 ---DFSGMIIYSFHATKPFG-IG-EGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKMSEYAAAIGIATMK---- 248 (377)
T ss_dssp ---TCSSEEEEECBTTSSSC-CB-SCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCCCHHHHHHHHHHHH----
T ss_pred ---CCCcEEEEECCCCCcCC-CC-CcEEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCCCCHHHHHHHHHHHH----
Confidence 111234444 569997 45 6788888789998888776442 2233333332222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC---CcccCCCc--ee--EEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCC
Q 019899 224 IQEYLETNKRRIKKLYDSFVAGLKQLG---IRCSESSA--GL--YCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPG 296 (334)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~l~~~g---~~~~~~~~--g~--~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g 296 (334)
.+....++.+++++++.+.|++.+ +......+ .+ ++.+.++... +..++... |+++||.++++
T Consensus 249 ---~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~-L~~~gI~~~~~ 318 (377)
T 3ju7_A 249 ---KWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPEEV------RNKQVIED-LKKQKIEARLY 318 (377)
T ss_dssp ---THHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCTTS------CHHHHHHH-HHTTTBCCBCT
T ss_pred ---HHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCChh------hHHHHHHH-HHHCCCceecc
Confidence 223444555666677777777764 22222111 11 2234444321 24577777 66689998766
Q ss_pred CC--cCCC-----------------CCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 297 SA--CHCI-----------------EPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 297 ~~--~~~~-----------------~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
.. ++.. ..+.+|+.+.. .+++|++++++.|++++.+.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~~~~~~ 375 (377)
T 3ju7_A 319 FSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQKVVSA 375 (377)
T ss_dssp TSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC-----
T ss_pred cCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHHHHhcc
Confidence 51 2110 01358999885 69999999999999887653
No 214
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.92 E-value=3.7e-24 Score=194.08 Aligned_cols=278 Identities=14% Similarity=0.107 Sum_probs=182.7
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhh----hhccCcEEEEE-eCCCCCCccc
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDI----RFRTGVELIPV-HCRSTDNFAF 79 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~~g~~v~~v-~~~~~~~~~~ 79 (334)
+++.+++.++.+ +.++++++++++..++.+++++||+|+++.++|+++...+ + ..|.+++.+ +..
T Consensus 63 l~~~la~~~g~~--~~v~~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~------- 132 (421)
T 2ctz_A 63 LEKRLAALEGGK--AALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLK-RLGIEVRFTSREE------- 132 (421)
T ss_dssp HHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHH-HTTCEEEECCTTC-------
T ss_pred HHHHHHHHhCCC--ceEEecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHH-HcCCEEEEECCCC-------
Confidence 334444434333 4455666699999999999999999999999999887776 5 689999998 741
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccc-cccccCCCCcchhhhhhhc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIY-GGSIFGNEEFVSMAEILEA 158 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~-~~~~~~~~~~~~~~~~~~~ 158 (334)
|++++++++++ ++++|++++|+||+|.+.| +++|.++|+++|+++|+|++| +.. +.+. .+ .
T Consensus 133 d~~~l~~~i~~------~~~~v~~~~~~n~~G~~~~---l~~i~~~a~~~g~~livD~~~~~~g-~~~~---~~----~- 194 (421)
T 2ctz_A 133 RPEEFLALTDE------KTRAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFGMGG-YLLR---PL----A- 194 (421)
T ss_dssp CHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGGG-TSCC---GG----G-
T ss_pred CHHHHHHhhcc------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccc-ccCC---cc----c-
Confidence 78999999876 8999999999999999999 999999999999999999999 542 2111 11 1
Q ss_pred cccCCCcEEEEecccccCCCCCceEEEEeecC--HHH----HHHHHHh---------------------------hcc-c
Q 019899 159 EEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYN--ESV----LAAAKKL---------------------------TRF-C 204 (334)
Q Consensus 159 ~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~--~~~----~~~~~~~---------------------------~~~-~ 204 (334)
.+.++++.|++|.++.+|.++|++++.+ +++ .+.+... ... .
T Consensus 195 ----~~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~ 270 (421)
T 2ctz_A 195 ----WGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQ 270 (421)
T ss_dssp ----GTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCC
T ss_pred ----cCCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHHHHHHhcCC
Confidence 3456888999999988898999888742 221 1122110 001 1
Q ss_pred CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccC------------------CCceeEEeee
Q 019899 205 SISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSE------------------SSAGLYCWAD 265 (334)
Q Consensus 205 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~------------------~~~g~~~~~~ 265 (334)
..++...+++...++. +..+.++..++.+++.+.|+++ +++.+. ...|.++.+.
T Consensus 271 ~~~~~~a~~~~~~l~~-------l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~~~~~~~~~g~ivsf~ 343 (421)
T 2ctz_A 271 ALGPFEAWVVLLGMET-------LSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFG 343 (421)
T ss_dssp CCCHHHHHHHHHHHTT-------HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEE
T ss_pred CCCHHHHHHHHcCcch-------HHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHHHHhccCCCceEEEEE
Confidence 2333333333333322 2233445557888888888886 555431 1123345566
Q ss_pred cCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCcCC---------------------CCCCeEEEEecCCCcccHHHHHH
Q 019899 266 MSGLIPSYSEKGELELWDKLLNIAKINVTPGSACHC---------------------IEPGWFRCCFTSLTHEDIPLVIE 324 (334)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~---------------------~~~~~iRi~~~~~~~~~l~~~l~ 324 (334)
+... ..+...+... ++..++.++.|..+.. ..++.+|+|++ .++++++++
T Consensus 344 l~~~-----~~~~~~~~~~-l~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vRlS~g---~e~~~~li~ 414 (421)
T 2ctz_A 344 LKGG-----YEAAKRFISR-LKLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVG---LEHVEDLKA 414 (421)
T ss_dssp ETTH-----HHHHHHHHHT-CSSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEECC---SSCHHHHHH
T ss_pred eCCC-----HHHHHHHHHh-CCcceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeC---CCCHHHHHH
Confidence 6531 0122233333 3334555555532110 12478999998 679999999
Q ss_pred HHHHHH
Q 019899 325 RIQKVA 330 (334)
Q Consensus 325 ~l~~~~ 330 (334)
.|.+++
T Consensus 415 ~l~~al 420 (421)
T 2ctz_A 415 ELKEAL 420 (421)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 998875
No 215
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.92 E-value=2.8e-24 Score=204.96 Aligned_cols=308 Identities=11% Similarity=0.006 Sum_probs=193.1
Q ss_pred hhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhh-hhhccCcEEEEEeCCCCCCc----ccc
Q 019899 6 SQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRD-IRFRTGVELIPVHCRSTDNF----AFS 80 (334)
Q Consensus 6 ~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~-~~~~~g~~v~~v~~~~~~~~----~~~ 80 (334)
++.+++.++.+ ..+++++|+++++.+++.+++++||+|+++.++|.++... +. ..|++++.++... +.+ .+|
T Consensus 179 e~~lA~~~gae-~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~~~-l~Ga~~v~v~~~~-~~~~i~g~id 255 (730)
T 1c4k_A 179 EKHAARVYNAD-KTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALA-MAGGRPVYLQTNR-NPYGFIGGIY 255 (730)
T ss_dssp HHHHHHHTTCS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTT-TTCCEEEEECEEE-CTTCCEEEEC
T ss_pred HHHHHHHHCCC-cEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHH-HCCCEEEEEeCCc-cccCccCCCC
Confidence 33444445544 3488888889999999999999999999999999999888 77 8899999887632 222 368
Q ss_pred HHHH-----HHHHHHH-HH--cCCce-eEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEecccccc-ccCCCCcc
Q 019899 81 ITAL-----DQAFNQA-RK--RGVKV-RGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGS-IFGNEEFV 150 (334)
Q Consensus 81 ~~~l-----~~~l~~~-~~--~~~~~-~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~-~~~~~~~~ 150 (334)
+++| ++++++. .. +..++ +++++++| ||+|.+.+ +++|+++|+++|++|++|++|+.. .+.+. ..
T Consensus 256 ~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~d---l~~I~~la~~~g~~livDeAh~~~~~f~~~-~~ 330 (730)
T 1c4k_A 256 DSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYN---AHEVVKRIGHLCDYIEFDSAWVGYEQFIPM-MR 330 (730)
T ss_dssp GGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEEC---HHHHHHHHGGGBSEEEEECTTCCGGGSSGG-GG
T ss_pred HHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecC---HHHHHHHHHHcCCeEEEEcccccccccCcc-cC
Confidence 8888 7777541 00 01112 88999998 58999998 999999999999999999999753 23211 10
Q ss_pred hhhhhhh-ccccCCCcEEEEecccccCCCCCce-EEEEeecCHHH--------HHHHHHh---hcccCCChHHHHHHHHh
Q 019899 151 SMAEILE-AEEVDKDRVHIIYGLSKDLSLPGFR-TGVIYSYNESV--------LAAAKKL---TRFCSISAPTQRLLISM 217 (334)
Q Consensus 151 ~~~~~~~-~~~~~~~~~~~~~s~sK~~~~~g~r-~g~i~~~~~~~--------~~~~~~~---~~~~~~~~~~~~~~~~~ 217 (334)
....+.. ..+.+..+++++.|+||+++ |++ .|+++++++.+ ...+... ....+.+.....++..+
T Consensus 331 g~~~l~~~~~g~D~~~~iv~~S~hK~L~--g~~~gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~stsp~~~~iaal~aA 408 (730)
T 1c4k_A 331 NSSPLLIDDLGPEDPGIIVVQSVHKQQA--GFSQTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYAALDVN 408 (730)
T ss_dssp GGCTTSCCCCCTTSCEEEEEECHHHHSS--CCTTCEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCHHHHHHHHHH
T ss_pred CcCcccccccCCCCCCEEEEECCCCCCC--CCCCEEEEEecchhhcCcccccCHHHHHHHHHHhCCCCCcHHHHHHHHHH
Confidence 0111110 00112345689999999874 333 35664434332 1222221 11223444444443333
Q ss_pred hCChHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCcccCCC-------------------------------------c
Q 019899 218 LSDTKFIQEYLETNKRRIKKLYDSFVAGLKQ--LGIRCSESS-------------------------------------A 258 (334)
Q Consensus 218 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~g~~~~~~~-------------------------------------~ 258 (334)
+.... .+...+..+++.++.+++++.|++ .|+++..+. .
T Consensus 409 ~~~l~--~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 486 (730)
T 1c4k_A 409 AAMQE--GEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYEGYGD 486 (730)
T ss_dssp HHHHS--HHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTTCCT
T ss_pred HHHHH--hhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccccccccchhhccCccchhccccccCC
Confidence 32111 112234456677788888888887 377664432 1
Q ss_pred e-e-E----EeeecCCc--CC---CCChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHH
Q 019899 259 G-L-Y----CWADMSGL--IP---SYSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERI 326 (334)
Q Consensus 259 g-~-~----~~~~~~~~--~~---~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l 326 (334)
+ + + +.+..|+. .. .....++.++.+.| .++||.+... ....+|++++. .++++++.++++|
T Consensus 487 ~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L-~e~GI~v~~~------~~~~ir~~~s~g~t~e~i~~Ll~aL 559 (730)
T 1c4k_A 487 NQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYL-RDHGIIPEKS------DLNSILFLMTPAETPAKMNNLITQL 559 (730)
T ss_dssp TCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHH-HHTTCCCSEE------CSSEEEEECCTTCCHHHHHHHHHHH
T ss_pred cccccCCeEEEEEeCCcccccccccccCCCHHHHHHHH-HHCCcEEEEC------CCCeEEEEeCCCCCHHHHHHHHHHH
Confidence 1 1 1 34444421 00 01123456777774 4569987542 24679999885 6889999999999
Q ss_pred HHHHHH
Q 019899 327 QKVAET 332 (334)
Q Consensus 327 ~~~~~~ 332 (334)
+++.+.
T Consensus 560 ~~i~~~ 565 (730)
T 1c4k_A 560 LQLQRL 565 (730)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 988754
No 216
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.92 E-value=8.1e-24 Score=203.43 Aligned_cols=297 Identities=10% Similarity=0.027 Sum_probs=186.7
Q ss_pred CcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcc----c-----cHHHHHHHH
Q 019899 18 SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFA----F-----SITALDQAF 88 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~----~-----~~~~l~~~l 88 (334)
+.+++++|+++++.+++.+++++||+|+++.|+|.++...+. ..|++++.++...+ +++ + |++++++++
T Consensus 222 ~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~-~~G~~~v~v~~~~~-~~g~~g~i~~~~~d~e~le~~i 299 (755)
T 2vyc_A 222 RSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLM-LTGAKPVYMVPSRN-RYGIIGPIYPQEMQPETLQKKI 299 (755)
T ss_dssp EEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHH-HHCCEEEEECCCBC-TTSCBCCCCGGGGSHHHHHHHH
T ss_pred ceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHH-HcCCEEEEEeCCCC-ccccccccCcCCCCHHHHHHHH
Confidence 457888999999999999999999999999999999999988 88999999987432 222 4 999999999
Q ss_pred HHH----HHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccc-cCCCCcchhhhhhhc-cccC
Q 019899 89 NQA----RKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSI-FGNEEFVSMAEILEA-EEVD 162 (334)
Q Consensus 89 ~~~----~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~-~~~~~~~~~~~~~~~-~~~~ 162 (334)
++. ..++.+++++++++| ||+|.+.+ +++|.++|+++|++|++|++|+... +.+ ...+...+..+ .++.
T Consensus 300 ~~~~~~k~~~~~~~klvil~~p-n~~G~v~d---l~~I~~ia~~~~~~livDeA~~~~~~~~~-~~~~~~~~~g~~aD~~ 374 (755)
T 2vyc_A 300 SESPLTKDKAGQKPSYCVVTNC-TYDGVCYN---AKEAQDLLEKTSDRLHFDEAWYGYARFNP-IYADHYAMRGEPGDHN 374 (755)
T ss_dssp HHCTTTGGGTTCCCSCEEEESS-CTTSEEEC---HHHHHHHHTTTCSEEEEECTTCTTGGGCG-GGTTSSSSCSCCCCCS
T ss_pred HhCccccccccCCCeEEEEECC-CCCceecC---HHHHHHHHHHcCCEEEEECcCchhcccCc-ccCCcchhcCCcCCcc
Confidence 762 113345568999998 79999999 9999999999999999999997532 221 10001111000 0222
Q ss_pred CCcEEEEecccccCCCCCce-EEEEeecCH--HH-HHHHHHh---hcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHH
Q 019899 163 KDRVHIIYGLSKDLSLPGFR-TGVIYSYNE--SV-LAAAKKL---TRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRI 235 (334)
Q Consensus 163 ~~~~~~~~s~sK~~~~~g~r-~g~i~~~~~--~~-~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 235 (334)
..+++++.|+||+++ |++ .|+++++++ .+ ...+... ....+++.+...++..+++... .+...+..+++
T Consensus 375 ~~~~iv~~S~hK~L~--g~~~g~~i~~~~~~~~i~~~~~~~~~~~~~s~sp~~~~iaal~aA~~~l~--~~gg~~~~~~~ 450 (755)
T 2vyc_A 375 GPTVFATHSTHKLLN--ALSQASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMMD--GNSGLSLTQEV 450 (755)
T ss_dssp SBEEEEEEETTTSSS--CCTTCEEEEEECCBTCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHS--THHHHHHHHHH
T ss_pred CCCeEEEECcccccc--CcCCeeeeeecCcccccCHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH--hhhHHHHHHHH
Confidence 456779999999874 443 566666443 11 1222221 1223444444444443332110 00012334445
Q ss_pred HHHHHHHHHHHHhC-C---------CcccCCC-------------------------------------------ce---
Q 019899 236 KKLYDSFVAGLKQL-G---------IRCSESS-------------------------------------------AG--- 259 (334)
Q Consensus 236 ~~~~~~~~~~l~~~-g---------~~~~~~~-------------------------------------------~g--- 259 (334)
.++.+++++.|+++ + +++..+. .+
T Consensus 451 ~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~ 530 (755)
T 2vyc_A 451 IDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDIPDNWSM 530 (755)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHCGGGTBCCTTCTTTCCTTCCTTSEE
T ss_pred HHHHHHHHHHHHhccccccccccceeeccCchhccccccccccccccccchhccchhhhhccCcccccccccccCCCccc
Confidence 55555556655543 2 3332221 11
Q ss_pred ---eEEeeecCCcC-CC---CChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHH
Q 019899 260 ---LYCWADMSGLI-PS---YSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAE 331 (334)
Q Consensus 260 ---~~~~~~~~~~~-~~---~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~ 331 (334)
..+.+.+++.. ++ ....++.++... |+++||.+... ..+.+|+.++. .|+++++.++++|+++.+
T Consensus 531 ~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~-L~~~gI~~e~~------~~~~v~~~~~~g~t~~~~~~l~~al~~~~~ 603 (755)
T 2vyc_A 531 LDPIKVSILAPGMGEDGELEETGVPAALVTAW-LGRHGIVPTRT------TDFQIMFLFSMGVTRGKWGTLVNTLCSFKR 603 (755)
T ss_dssp ECTTEEEEECSCBCTTSSBCSSCCCHHHHHHH-HHTTTCCCSEE------CSSEEEEECCTTCCTTTTHHHHHHHHHHHH
T ss_pred cCCeEEEEEcCCCCCCCCccccCCcHHHHHHH-HHHCCCEEeec------CCCeEEEEECCCCCHHHHHHHHHHHHHHHH
Confidence 12334444311 11 012344567777 56699876431 25679999885 699999999999998865
Q ss_pred H
Q 019899 332 T 332 (334)
Q Consensus 332 ~ 332 (334)
.
T Consensus 604 ~ 604 (755)
T 2vyc_A 604 H 604 (755)
T ss_dssp H
T ss_pred h
Confidence 3
No 217
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.92 E-value=3.1e-23 Score=189.13 Aligned_cols=286 Identities=13% Similarity=0.111 Sum_probs=189.5
Q ss_pred hhhhcCCCCCCCCcEEEecCcHHHHHHHHHHh---------cCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCC
Q 019899 6 SQVLGQAVSFDPSQIVLTAGATPAVEILCFCL---------ADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDN 76 (334)
Q Consensus 6 ~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l---------~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~ 76 (334)
++.+++.++.+ ++++++++++++..++.++ .++||+|+++.|+|+++...+. ..|.+++.+++++ ++
T Consensus 68 ~~~la~~~g~~--~~i~~~sGt~a~~~al~~l~~~~~~~~~~~~gd~Vi~~~~~~~~~~~~~~-~~g~~~~~v~~~~-~~ 143 (437)
T 3bb8_A 68 EKKLGEYLGVP--YVLTTTSGSSANLLALTALTSPKLGVRALKPGDEVITVAAGFPTTVNPTI-QNGLIPVFVDVDI-PT 143 (437)
T ss_dssp HHHHHHHHTCS--EEEEESCHHHHHHHHHHHTTCGGGGGGSCCTTCEEEECSSSCHHHHHHHH-HTTCEEEECCEET-TT
T ss_pred HHHHHHHHCCC--cEEEeCCHHHHHHHHHHHhhhcccccccCCCcCEEEECCCCcHHHHHHHH-HcCCEEEEEeccC-cc
Confidence 34444444433 6888888999999999998 7899999999999999999998 8999999998743 35
Q ss_pred ccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhh
Q 019899 77 FAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEIL 156 (334)
Q Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~ 156 (334)
+.+|++++++++++ ++++|++++ ++|...+ +++|.++|+++|+++|+|++|+.+... ....+.
T Consensus 144 ~~~d~~~l~~~i~~------~~~~v~~~~---~~g~~~~---~~~i~~l~~~~~~~li~D~a~~~g~~~-----~~~~~~ 206 (437)
T 3bb8_A 144 YNVNASLIEAAVSD------KTKAIMIAH---TLGNLFD---LAEVRRVADKYNLWLIEDCCDALGSTY-----DGKMAG 206 (437)
T ss_dssp TEECGGGHHHHCCT------TEEEEEEEC---GGGCCCC---HHHHHHHHHHHTCEEEEECTTCTTCEE-----TTEETT
T ss_pred CCcCHHHHHHhcCC------CCeEEEEeC---CCCChhc---HHHHHHHHHHcCCEEEEECccccCceE-----CCeecc
Confidence 78999999999875 789898884 3455566 999999999999999999999853211 111111
Q ss_pred hccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhccc--------------------------------
Q 019899 157 EAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFC-------------------------------- 204 (334)
Q Consensus 157 ~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~-------------------------------- 204 (334)
. . .++++.||+|..+++|.+.|+++++++.+.+.++.....+
T Consensus 207 ~-----~-~d~~~~s~~~~k~l~~g~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (437)
T 3bb8_A 207 T-----F-GDIGTVSFYPAKHITMGEGGAVFTQSAELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKY 280 (437)
T ss_dssp S-----S-SSEEEEECSTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTBCC----------------CCSCCCTTCCGGG
T ss_pred c-----c-cCEEEEECcCCcCCCCCCeEEEEeCCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccc
Confidence 0 1 2366678877777788899999985565555443311100
Q ss_pred ---------CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCC-----ce---eEEeeec
Q 019899 205 ---------SISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSESS-----AG---LYCWADM 266 (334)
Q Consensus 205 ---------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~-----~g---~~~~~~~ 266 (334)
..+.+...+....+ +.+ .+..++.+++.+++.+.|++. ++...... .+ +.+.++.
T Consensus 281 ~~~~~g~~~~~~~~~aa~~l~~l---~~~----~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 353 (437)
T 3bb8_A 281 TYSHLGYNLKITDMQAACGLAQL---ERI----EEFVEKRKANFKYLKDALQSCADFIELPEATENSDPSWFGFPITLKE 353 (437)
T ss_dssp CBCSCCCBCCCBHHHHHHHHHHH---HHH----HHHHHHHHHHHHHHHHHGGGGTTTEECCCCCTTEECCCSSEEEEECG
T ss_pred cccccCcccCCCHHHHHHHHHHH---HHH----HHHHHHHHHHHHHHHHHhhccCCccccCCCCCCCceeeEEEEEEECC
Confidence 01122222222222 111 233334466778888899887 65543211 02 2333443
Q ss_pred CCcCCCCChhhHHHHHHHHHHhcCeEEcCCCC--cC--CC--------C----------CCeEEEEecC-CCcccHHHHH
Q 019899 267 SGLIPSYSEKGELELWDKLLNIAKINVTPGSA--CH--CI--------E----------PGWFRCCFTS-LTHEDIPLVI 323 (334)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~--~~--~~--------~----------~~~iRi~~~~-~~~~~l~~~l 323 (334)
+.. .+..++... |.++||.++++.. +. +. . .+.+|++++. +|++|+++++
T Consensus 354 ~~~------~~~~~l~~~-L~~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~i~ 426 (437)
T 3bb8_A 354 DSG------VSRIDLVKF-LDEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIMNQTFWIGIYPGLTHDHLDYVV 426 (437)
T ss_dssp GGS------SCHHHHHHH-HHHTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHHHHEEEECCSTTCCHHHHHHHH
T ss_pred cCc------CcHHHHHHH-HHHCCCceeccCCcccccCchhhccCccccCCCcHHHHHhcCEEEecCCCCCCHHHHHHHH
Confidence 311 134577777 5558999987754 11 00 0 1249999886 6999999999
Q ss_pred HHHHHHHHH
Q 019899 324 ERIQKVAET 332 (334)
Q Consensus 324 ~~l~~~~~~ 332 (334)
+.|+++++.
T Consensus 427 ~~l~~~~~~ 435 (437)
T 3bb8_A 427 SKFEEFFGL 435 (437)
T ss_dssp HHHHHHTTT
T ss_pred HHHHHHHcc
Confidence 999988754
No 218
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.92 E-value=7.4e-25 Score=199.84 Aligned_cols=278 Identities=13% Similarity=0.122 Sum_probs=183.4
Q ss_pred hhcCCCCCCCCcEEEecCcHHHHHHHHHH-hcCCCCeEEecCCCCCChhhhhhh---ccCcEEEEEeCCCCCCccccHHH
Q 019899 8 VLGQAVSFDPSQIVLTAGATPAVEILCFC-LADHGNALLVPSPYYPGFDRDIRF---RTGVELIPVHCRSTDNFAFSITA 83 (334)
Q Consensus 8 ~~~~~~~~~~~~i~~~~g~~~~~~~~~~~-l~~~gd~vl~~~p~~~~~~~~~~~---~~g~~v~~v~~~~~~~~~~~~~~ 83 (334)
.+++.++++++++++++|++.++.++..+ ..++||+|+++.++|+++...++. ..|.+++.++. +++.+|+++
T Consensus 116 ~la~~~g~~~~~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~---~~~~~d~~~ 192 (438)
T 1wyu_A 116 MIAELAGLEIANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL---EGGRTPLPE 192 (438)
T ss_dssp HHHHHHTSSEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECC---BTTBCCCCC
T ss_pred HHHHHhCCCccceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcC---cCCccCHHH
Confidence 33344456777899999999554444333 247899999999999999876641 37999999996 234677766
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEecc-ccccccCCCCcchhhhhhhccccC
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEI-YGGSIFGNEEFVSMAEILEAEEVD 162 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~-~~~~~~~~~~~~~~~~~~~~~~~~ 162 (334)
+++ ++++|++++| ||||.+.+ +++|.++|+++|+++++|.. .+...+ .. + ..
T Consensus 193 ----i~~------~t~~v~i~~p-n~tG~~~~---l~~i~~la~~~g~~vivd~d~~a~g~~---~~-~-~~-------- 245 (438)
T 1wyu_A 193 ----VGE------EVGAVVVQNP-NFLGALED---LGPFAEAAHGAGALFVAVADPLSLGVL---KP-P-GA-------- 245 (438)
T ss_dssp ----CCT------TEEEEEEESS-CTTSBCCC---HHHHHHHHHHTTCEEEEECCTTGGGTB---CC-H-HH--------
T ss_pred ----hCC------CeEEEEEECC-CCCeEEec---HHHHHHHHHHcCCEEEEEechhhccCc---CC-C-cc--------
Confidence 433 7999999999 99999998 99999999999999996632 211111 11 1 11
Q ss_pred CCcEEEEecccccCC----CCCceEEEEeecCHHHHHHHHH----------------------------hhcccCCCh-H
Q 019899 163 KDRVHIIYGLSKDLS----LPGFRTGVIYSYNESVLAAAKK----------------------------LTRFCSISA-P 209 (334)
Q Consensus 163 ~~~~~~~~s~sK~~~----~~g~r~g~i~~~~~~~~~~~~~----------------------------~~~~~~~~~-~ 209 (334)
.+.++++.| +|.+| +.|.++|++++ ++++.+.+.. .....+.++ .
T Consensus 246 ~g~D~~~~s-~kk~~~~~~~~Gp~~G~l~~-~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~ 323 (438)
T 1wyu_A 246 YGADIAVGD-GQSLGLPMGFGGPHFGFLAT-KKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNA 323 (438)
T ss_dssp HTCSEEEEE-CTTTTCCCGGGCSCCEEEEE-CGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCC
T ss_pred CCCCEEEEC-CcccCCCccCCCCCeeEEEE-cHHHHHhCCCceeccccccCCCcceeeeccccccccchhcccCCccchH
Confidence 234456666 55443 34568999998 6666544311 011111100 1
Q ss_pred HHHHHHHh--hCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCceeEEeeecCCcCCCCChhhHHHHHHHHH
Q 019899 210 TQRLLISM--LSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSESSAGLYCWADMSGLIPSYSEKGELELWDKLL 286 (334)
Q Consensus 210 ~~~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll 286 (334)
...++..+ +... ..+.+.+..+++.++++++.+.|++. |+++..+. +++.++.+... .+..++.++|.
T Consensus 324 ~~~a~~aa~~l~~~--~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~~~~~~~~~~~------~~~~~~~~~L~ 394 (438)
T 1wyu_A 324 QLTALMGAMYLAAL--GPEGLREVALKSVEMAHKLHALLLEVPGVRPFTPK-PFFNEFALALP------KDPEAVRRALA 394 (438)
T ss_dssp HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCS-SBCSEEEEECS------SCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCC-CeEEEEEEeCC------CCHHHHHHHHH
Confidence 12222222 2211 13345777888999999999999998 88887653 33322223211 13468888866
Q ss_pred HhcCeEE--cCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHH
Q 019899 287 NIAKINV--TPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVA 330 (334)
Q Consensus 287 ~~~gi~v--~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~ 330 (334)
+ +||.+ .++..|+ ++++|++++. .+++|+++++++|++++
T Consensus 395 ~-~gi~v~~~~~~~~~---~~~lRis~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 395 E-RGFHGATPVPREYG---ENLALFAATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp H-TTCCCCEECCTTSC---SSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred H-CCceeccccccccC---CCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence 5 69998 6777664 6799999986 58999999999998764
No 219
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.91 E-value=5.7e-23 Score=184.47 Aligned_cols=243 Identities=14% Similarity=0.095 Sum_probs=172.8
Q ss_pred hhhhhcCCCCCCCCcEEE---ecCcHHHHHHHHHHhcCCCCeEEecC-CCCCChhh----------hhhhccCcEEEEEe
Q 019899 5 MSQVLGQAVSFDPSQIVL---TAGATPAVEILCFCLADHGNALLVPS-PYYPGFDR----------DIRFRTGVELIPVH 70 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~---~~g~~~~~~~~~~~l~~~gd~vl~~~-p~~~~~~~----------~~~~~~g~~v~~v~ 70 (334)
+.+.+++.++. +..++ ++++++|+..++.+++++||+|+++. |.|..+.. .++ ..|.+++.++
T Consensus 64 Le~~lA~l~g~--e~alv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~~~y~~~~~~~~~~g~~~~~l~-~~G~~~~~v~ 140 (409)
T 3jzl_A 64 LERVYATVFKT--EAALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGIRKQGQGSLK-DFHIGYSSVP 140 (409)
T ss_dssp HHHHHHHHHTC--SEEEEETTSCSHHHHHHHHHHHHCCTTCEEEECSSSCCTTHHHHHTSSSSSSSCTG-GGTCEEEECC
T ss_pred HHHHHHHHhCC--CcEEEECCCccHHHHHHHHHHHhcCCCCEEEEeCCCCcHhHHHHHhcccchhhHHH-HcCCEEEEeC
Confidence 34444443433 44455 88999999999999999999999998 99998874 445 6799999999
Q ss_pred CCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeC----CCCCcccCCCHHHHHHHHHHHHh--cCcEEEEecccccccc
Q 019899 71 CRSTDNFAFSITALDQAFNQARKRGVKVRGILICN----PANPVGNIIPRETLYELLDFARE--KNIHVISDEIYGGSIF 144 (334)
Q Consensus 71 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~----p~nptG~~~~~~~l~~i~~~~~~--~~~~vi~D~~~~~~~~ 144 (334)
++ .++.+|++++++++++ ++++|++++ |+||||.+.+ +++|+++|++ +|+++++|++|+.+.+
T Consensus 141 ~~--~~g~~d~e~l~~ai~~------~tklV~i~~s~g~p~nptg~v~~---l~~I~~la~~~~~~~~livD~a~~~~~~ 209 (409)
T 3jzl_A 141 LL--ENGDVDFPRIAKKMTP------KTKMIGIQRSRGYADRPSFTIEK---IKEMIVFVKNINPEVIVFVDNCYGEFVE 209 (409)
T ss_dssp CC--TTSCCCHHHHHHHCCT------TEEEEEEECSCTTSSSCCCCHHH---HHHHHHHHHHHCTTCEEEEECTTCTTTS
T ss_pred CC--CCCCcCHHHHHHhccC------CCeEEEEECCCCCCCCCcCcccc---HHHHHHHHHhhCCCCEEEEeCCcccccc
Confidence 74 4567999999999976 799999999 9999998866 9999999999 9999999999987654
Q ss_pred CCCCcchhhhhhhccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHHhhcc--c----CCChHHHHHHHHh
Q 019899 145 GNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKKLTRF--C----SISAPTQRLLISM 217 (334)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~ 217 (334)
...+ . . .+.+++++|+||.+|.+| ...||+++ ++++++.++..... . +.+.....++...
T Consensus 210 ~~~p-~------~-----~g~Div~~S~sK~lgg~~~~~GG~v~~-~~~li~~l~~~~~~~~~g~~~g~~~~~~~~~l~g 276 (409)
T 3jzl_A 210 YQEP-P------E-----VGADIIAGSLIKNPGGGLAKTGGYIAG-KEALVDLCGYRLTTPGIGREAGASLYSLLEMYQG 276 (409)
T ss_dssp SCCS-G------G-----GTCSEEEEETTSGGGTTTCSSCEEEEE-CHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHH
T ss_pred cCCc-c------c-----cCCeEEEECccccCCccCCceEEEEEe-CHHHHHHHHHHhccccccccccccHHHHHHHHHH
Confidence 2211 1 1 355689999999997554 44699998 89999988764221 1 1111112222222
Q ss_pred hCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCce----eEEeeecCCcCCCCChhhHHHHHHHHHH
Q 019899 218 LSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAG----LYCWADMSGLIPSYSEKGELELWDKLLN 287 (334)
Q Consensus 218 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 287 (334)
+ .....+.++..+++.++.+.|+++|+++.+.... ..+.+.+.. .+....+++.|..
T Consensus 277 l-------~~~~~r~~~~~~~a~~la~~L~~~g~~v~p~~~~~~~~~i~~i~l~~------~~~~~~~~~~L~~ 337 (409)
T 3jzl_A 277 F-------FLAPHVTAQAIKGARFTAAMLAEFGVEADPVWDAPRTDLIQSVSFHN------KEKMVAFAQAIQA 337 (409)
T ss_dssp H-------HHHHHHHHHHHHHHHHHHHHHHHTTCEEESCTTSCCSSSCCEEECSC------HHHHHHHHHHHHH
T ss_pred H-------hhHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCCccEEEEEEeCC------HHHHHHHHHHHHh
Confidence 2 1234566778889999999999999877433222 244455542 2345677777444
No 220
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.90 E-value=3.6e-22 Score=179.38 Aligned_cols=269 Identities=14% Similarity=0.093 Sum_probs=181.3
Q ss_pred cEEEecCcHHHHHHHHHHh-------cCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHH
Q 019899 19 QIVLTAGATPAVEILCFCL-------ADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQA 91 (334)
Q Consensus 19 ~i~~~~g~~~~~~~~~~~l-------~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~ 91 (334)
++++++++++++..++.++ .++||+|+++.|+|.++...+. ..|.+++.+++++ +++.+|++++++++++
T Consensus 51 ~~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~- 127 (390)
T 3b8x_A 51 YAVMVSSGSTANLLMIAALFFTKKPRLKKGDEIIVPAVSWSTTYYPLQ-QYGLRVKFVDIDI-NTLNIDIESLKEAVTD- 127 (390)
T ss_dssp EEEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEEEESSSCHHHHHHHH-HTTCEEEEECBCT-TTCSBCHHHHHHHCCT-
T ss_pred cEEEECCHHHHHHHHHHHHHhhhhcCCCCcCEEEECCCCcHHHHHHHH-HcCCEEEEEecCc-cccCcCHHHHHHHhCc-
Confidence 6788888889999999998 7889999999999999999998 8999999999853 3478999999999875
Q ss_pred HHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEe-
Q 019899 92 RKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIY- 170 (334)
Q Consensus 92 ~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 170 (334)
++++|++++ ++|...+ +++|.++|+++|+++|+|++|+.+... ....+. ...++...
T Consensus 128 -----~~~~v~~~~---~~g~~~~---~~~i~~l~~~~~~~li~D~a~~~g~~~-----~~~~~g------~~~~~~~~s 185 (390)
T 3b8x_A 128 -----STKAILTVN---LLGNPNN---FDEINKIIGGRDIILLEDNCESMGATF-----NNKCAG------TFGLMGTFS 185 (390)
T ss_dssp -----TEEEEEEEC---GGGCCCC---HHHHHHHHTTSCCEEEEECTTCTTCEE-----TTEETT------SSSSEEEEE
T ss_pred -----CCeEEEEEC---CccChhh---HHHHHHHHHHcCCEEEEECcCcccCEE-----CCcccc------cccceEEEE
Confidence 789888874 5677677 999999999999999999999853221 111110 11122222
Q ss_pred -cccccCCCCCceEEEEeecCHHHHHHHHHhhccc-----------------------------C----CChHHHHHHHH
Q 019899 171 -GLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFC-----------------------------S----ISAPTQRLLIS 216 (334)
Q Consensus 171 -s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~-----------------------------~----~~~~~~~~~~~ 216 (334)
..+|.++ +|. .|+++++++++.+.++.....+ + .+.....+...
T Consensus 186 ~~~~k~~~-~g~-gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~ 263 (390)
T 3b8x_A 186 SFYSNHIA-TME-GGCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIE 263 (390)
T ss_dssp CCTTSSSC-SSS-CEEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHH
T ss_pred ccCCCCCc-cCC-ceEEEeCCHHHHHHHHHHHhcCCCccccccccccccccccccccccceeccccccCcCHHHHHHHHH
Confidence 2345553 343 4999986667776665432111 1 22222222222
Q ss_pred hhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCC--Ccee-EEeeecCCcCCCCChhhHHHHHHHHHHhcCeE
Q 019899 217 MLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL-GIRCSES--SAGL-YCWADMSGLIPSYSEKGELELWDKLLNIAKIN 292 (334)
Q Consensus 217 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~--~~g~-~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~ 292 (334)
.+ +.+++..++.+++++++.+.|++. ++++..+ ..++ .+++.++... ..+..++... |+++||.
T Consensus 264 ~l-------~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~~l~~~-L~~~gI~ 331 (390)
T 3b8x_A 264 QL-------KKLPRFISVRRKNAEYFLDKFKDHPYLDVQQETGESSWFGFSFIIKKDS----GVIRKQLVEN-LNSAGIE 331 (390)
T ss_dssp HH-------HHHHHHHHHHHHHHHHHHHHHTTCSSEEECCCCSBCCCCEEEEEECTTS----CCCHHHHHHH-HHHTTBC
T ss_pred HH-------HHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCcccEEEEEEecCcC----cccHHHHHHH-HHHCCCC
Confidence 21 234566777788889999999886 6766543 2333 3555665311 1134577777 4568999
Q ss_pred EcC---CCCcCC-C--C-----------------CCeEEEEecC-CCcccHHHHHHHH
Q 019899 293 VTP---GSACHC-I--E-----------------PGWFRCCFTS-LTHEDIPLVIERI 326 (334)
Q Consensus 293 v~~---g~~~~~-~--~-----------------~~~iRi~~~~-~~~~~l~~~l~~l 326 (334)
+.+ +..+.. . . .+.+|++++. .|++|++++++.|
T Consensus 332 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 332 CRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp CBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECCSSCCHHHHHHHHHHT
T ss_pred eeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeCCCCCCHHHHHHHHHhh
Confidence 886 332211 0 0 0359999986 6999999998876
No 221
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.90 E-value=8e-23 Score=184.10 Aligned_cols=244 Identities=11% Similarity=0.068 Sum_probs=171.3
Q ss_pred hhhhcCCCCCCCCcEEE---ecCcHHHHHHHHHHhcCCCCeEEecC-CCCCChh-----------hhhhhccCcEEEEEe
Q 019899 6 SQVLGQAVSFDPSQIVL---TAGATPAVEILCFCLADHGNALLVPS-PYYPGFD-----------RDIRFRTGVELIPVH 70 (334)
Q Consensus 6 ~~~~~~~~~~~~~~i~~---~~g~~~~~~~~~~~l~~~gd~vl~~~-p~~~~~~-----------~~~~~~~g~~v~~v~ 70 (334)
.+++++.++. +..++ ++++++|+..++.+++++||+|++++ |.|+.+. ..++ ..|.+++.++
T Consensus 79 e~~lA~l~g~--e~alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~-~~G~~~~~v~ 155 (427)
T 3i16_A 79 DAVYARVFNT--ESALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLK-EFGINYKQVD 155 (427)
T ss_dssp HHHHHHHHTC--SEEEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTG-GGTCEEEECC
T ss_pred HHHHHHHhCC--cceEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchHHHHH-HcCCEEEEec
Confidence 3344443443 33355 78889999999999999999999999 9999876 3445 6799999999
Q ss_pred CCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeC----CCCCcccCCCHHHHHHHHHHHHh--cCcEEEEecccccccc
Q 019899 71 CRSTDNFAFSITALDQAFNQARKRGVKVRGILICN----PANPVGNIIPRETLYELLDFARE--KNIHVISDEIYGGSIF 144 (334)
Q Consensus 71 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~----p~nptG~~~~~~~l~~i~~~~~~--~~~~vi~D~~~~~~~~ 144 (334)
+. .++.+|++++++++++ ..++++|++++ |+||+|.+.+ +++|+++|++ +|+++++|++|+.+.+
T Consensus 156 ~~--~~g~~D~e~l~~~l~~----~~~tklV~i~~s~~~p~nptg~i~d---l~~i~~la~~~~~g~~livD~a~~~~~~ 226 (427)
T 3i16_A 156 LK--EDGKPNLEEIEKVLKE----DESITLVHIQRSTGYGWRRALLIED---IKSIVDCVKNIRKDIICFVDNCYGEFMD 226 (427)
T ss_dssp CC--TTSSCCHHHHHHHHHT----CTTEEEEEEECSCCSSSSCCCCHHH---HHHHHHHHHHHCTTSEEEEECTTTTTSS
T ss_pred Cc--cCCCcCHHHHHHHhhC----CCCCEEEEEEcCCCCCCCCcccHHH---HHHHHHHHHHhCCCCEEEEECCCccccc
Confidence 74 3457899999999982 01799999999 9999987755 9999999999 9999999999987654
Q ss_pred CCCCcchhhhhhhccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHHhhc--ccC--CCh-HH-HHHHHHh
Q 019899 145 GNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKKLTR--FCS--ISA-PT-QRLLISM 217 (334)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~~~~--~~~--~~~-~~-~~~~~~~ 217 (334)
...+ . . .+.+++++|+||.+|.+| .+.||+++ ++++++.++.... ..+ .++ .. ...+...
T Consensus 227 ~~~p---~----~-----~gaDiv~~S~sK~lgg~g~~~gG~i~~-~~~li~~l~~~~~~~~~g~~~~~~~~~a~~~l~g 293 (427)
T 3i16_A 227 TKEP---T----D-----VGADLIAGSLIKNIGGGIAPTGGYLAG-TKDCIEKTSYRLTVPGIGGECGSTFGVVRSMYQG 293 (427)
T ss_dssp SSCG---G----G-----GTCSEEEEETTSGGGTTTCCSCEEEEE-CHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHH
T ss_pred cCCc---c----c-----cCCeEEEecCcccCCCCCCceEEEEEE-CHHHHHHHHHhcccCccCccCCccHHHHHHHHHH
Confidence 2211 1 1 355689999999997555 56799998 8999998876322 111 111 11 1111111
Q ss_pred hCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCce----eEEeeecCCcCCCCChhhHHHHHHHHHH
Q 019899 218 LSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAG----LYCWADMSGLIPSYSEKGELELWDKLLN 287 (334)
Q Consensus 218 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 287 (334)
+ .....+.+++.+++.++.+.|+++|+++.+..+. ..+.+.+.. .+....+++.|..
T Consensus 294 l-------~~~~~r~~~~~~~a~~la~~L~~~g~~V~p~~~~~~~~~i~~i~l~~------~~~~~~f~~~l~~ 354 (427)
T 3i16_A 294 L-------FLAPHISMEALKGAILCSRIMELAGFEVMPKYDEKRSDIIQSIKFND------KDKLIEFCKGIQT 354 (427)
T ss_dssp H-------HHHHHHHHHHHHHHHHHHHHHHHTTCEEESCTTSCCSSSCEEEECSS------HHHHHHHHHHHHH
T ss_pred H-------HHHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCCccEEEEEEECC------HHHHHHHHHHHhh
Confidence 1 1234567788889999999999998877433222 144455532 2345567777444
No 222
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.90 E-value=1.4e-22 Score=182.47 Aligned_cols=243 Identities=15% Similarity=0.087 Sum_probs=170.9
Q ss_pred hhhhcCCCCCCCCcEEE---ecCcHHHHHHHHHHhcCCCCeEEecC-CCCCChh-----------hhhhhccCcEEEEEe
Q 019899 6 SQVLGQAVSFDPSQIVL---TAGATPAVEILCFCLADHGNALLVPS-PYYPGFD-----------RDIRFRTGVELIPVH 70 (334)
Q Consensus 6 ~~~~~~~~~~~~~~i~~---~~g~~~~~~~~~~~l~~~gd~vl~~~-p~~~~~~-----------~~~~~~~g~~v~~v~ 70 (334)
++++++.++ .+..++ ++++++|+..++.+++++||+|++++ |.|..+. ..++ ..|.+++.++
T Consensus 80 e~~lA~l~g--~e~alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~-~~G~~~~~v~ 156 (427)
T 3hvy_A 80 DRVYANIFN--TESAFVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMDDSKKVGSLR-EYGVKYKMVD 156 (427)
T ss_dssp HHHHHHHHT--CSEEEEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCCTTCCSCCTG-GGTCEEEECC
T ss_pred HHHHHHHhC--CCceEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhccccchhhhHHH-HcCCEEEEec
Confidence 344443343 344466 78899999999999999999999999 9998876 3455 6799999998
Q ss_pred CCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeC----CCCCcccCCCHHHHHHHHHHHHh--cCcEEEEecccccccc
Q 019899 71 CRSTDNFAFSITALDQAFNQARKRGVKVRGILICN----PANPVGNIIPRETLYELLDFARE--KNIHVISDEIYGGSIF 144 (334)
Q Consensus 71 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~----p~nptG~~~~~~~l~~i~~~~~~--~~~~vi~D~~~~~~~~ 144 (334)
. +++.+|++++++++++ ..++++|++++ |+||||.+.+ +++|+++|++ +|+++++|++|+.+.+
T Consensus 157 ~---~~~~~d~e~l~~~i~~----~~~tklV~i~~s~gyp~nptg~v~d---l~~i~~ia~~~~~g~~livD~a~~~~~~ 226 (427)
T 3hvy_A 157 L---KDGKVDINTVKEELKK----DDSIKLIHIQRSTGYGWRKSLRIAE---IAEIIKSIREVNENVIVFVDNCYGEFVE 226 (427)
T ss_dssp C---BTTBCCHHHHHHHHHH----CTTEEEEEEESSCCSSSSCCCCHHH---HHHHHHHHHHHCSSSEEEEECTTCTTTS
T ss_pred C---CCCCcCHHHHHHHhhC----CCCCEEEEEECCCCCCCCccccHHH---HHHHHHHHHHhCCCCEEEEECCcccccc
Confidence 7 4467999999999983 01899999999 9999987755 9999999999 8999999999987654
Q ss_pred CCCCcchhhhhhhccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHHhhc--ccC--CCh-HH-HHHHHHh
Q 019899 145 GNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKKLTR--FCS--ISA-PT-QRLLISM 217 (334)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~~~~--~~~--~~~-~~-~~~~~~~ 217 (334)
... +. . .+.+++++|+||.++.+| .+.||+++ ++++++.++.... ..+ .++ +. ...+...
T Consensus 227 ~~~---p~----~-----~gaDiv~~S~sK~lgg~g~~~GG~i~~-~~~li~~l~~~~~~~~~g~~~~~~~~~a~~~~~g 293 (427)
T 3hvy_A 227 EKE---PT----D-----VGADIIAGSLIKNIGGGIATTGGYIAG-KEEYVTQATFRVTVPGIGGECGSTFGVMRSLYEG 293 (427)
T ss_dssp SSC---GG----G-----GTCSEEEEETTSGGGTTTCCSCEEEEE-CHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHH
T ss_pred CCC---Cc----c-----cCCeEEEECCcccccccccceEEEEEE-CHHHHHHHHHHhhcCCcccccCCCHHHHHHHHHh
Confidence 221 11 1 355689999999997444 45699988 8999998876432 111 111 11 1222222
Q ss_pred hCChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCce----eEEeeecCCcCCCCChhhHHHHHHHHHH
Q 019899 218 LSDTKFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCSESSAG----LYCWADMSGLIPSYSEKGELELWDKLLN 287 (334)
Q Consensus 218 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 287 (334)
+ .....+.++..+++.++.+.|+++|+++.+.++. ..+.+.+.. .+....+++.|..
T Consensus 294 l-------~~~~~r~~~~~~~a~~la~~L~~~g~~V~p~~~~~~~~li~~~~l~~------~~~~~~f~~~l~~ 354 (427)
T 3hvy_A 294 L-------FMAPHVTIEAVKGAVFCARIMELAGFDVLPKYNDKRTDIIQAIKFND------EKKLIDFIKGIQT 354 (427)
T ss_dssp H-------HHHHHHHHHHHHHHHHHHHHHHHTTCEEESCTTSCCSSSEEEEECSS------HHHHHHHHHHHHH
T ss_pred H-------hHHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCCceEEEEEeCCC------HHHHHHHHHHhcc
Confidence 1 1224566778889999999999999877433222 255566642 2344567777433
No 223
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.90 E-value=1.1e-22 Score=184.15 Aligned_cols=231 Identities=15% Similarity=0.085 Sum_probs=166.1
Q ss_pred ecCcHHHHHHHHHHhcCCCCeEEecC-CCCCChhhhhh---------hccCcEEEEEeCCCCCCccccHHHHHHHHHHHH
Q 019899 23 TAGATPAVEILCFCLADHGNALLVPS-PYYPGFDRDIR---------FRTGVELIPVHCRSTDNFAFSITALDQAFNQAR 92 (334)
Q Consensus 23 ~~g~~~~~~~~~~~l~~~gd~vl~~~-p~~~~~~~~~~---------~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~ 92 (334)
++++++|+..++.+++++||+|+++. |.|..+...+. ...|.+++.++.+ .++.+|++++++++++
T Consensus 89 ~~sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~v~~~--~~~~~d~e~l~~~l~~-- 164 (431)
T 3ht4_A 89 IISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLT--EGGLVDFEAVAAAIHS-- 164 (431)
T ss_dssp SCSHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEECCBC--TTSSBCHHHHHHHCCT--
T ss_pred eeCHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEEEeCCC--CCCCcCHHHHHhhcCC--
Confidence 34678999999999999999999998 99999886543 0479999999984 3468999999999975
Q ss_pred HcCCceeEEEEeC-CCCCcccCCCHHHHHHHHHHHHh--cCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEE
Q 019899 93 KRGVKVRGILICN-PANPVGNIIPRETLYELLDFARE--KNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHII 169 (334)
Q Consensus 93 ~~~~~~~~i~~~~-p~nptG~~~~~~~l~~i~~~~~~--~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (334)
++++|++++ |+||+|...+.+++++|+++|++ +|+++++|++|+.+.+.... . . .+.++++
T Consensus 165 ----~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~---~----~-----~g~Di~~ 228 (431)
T 3ht4_A 165 ----NTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEP---C----H-----VGADLMA 228 (431)
T ss_dssp ----TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCG---G----G-----TTCSEEE
T ss_pred ----CCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCc---c----c-----cCCeEEE
Confidence 899999994 89999999999999999999999 99999999999987653321 1 1 3456889
Q ss_pred ecccccCCC-CCceEEEEeecCHHHHHHHHHhhcc--c----CCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHH
Q 019899 170 YGLSKDLSL-PGFRTGVIYSYNESVLAAAKKLTRF--C----SISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSF 242 (334)
Q Consensus 170 ~s~sK~~~~-~g~r~g~i~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 242 (334)
+|++|.+|. .+...||+++ ++++++.++..... . +.+......+...+ .....+.++..+++.++
T Consensus 229 ~S~sK~lgg~~~~~GG~v~~-~~~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l-------~~~~~~~~~~~~~a~~l 300 (431)
T 3ht4_A 229 GSLIKNPGGGIVKTGGYIVG-KEQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGF-------FLAPHVAGQALKGAIFT 300 (431)
T ss_dssp EETTSGGGTTTCSSCEEEEE-CHHHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHH-------HHHHHHHHHHHHHHHHH
T ss_pred cCccccCCCCCCCceEEEEe-cHHHHHHHHHHhccCCcccccCccHHHHHHHHhHh-------hhHHHHHHHHHHHHHHH
Confidence 999999752 1233499998 88998888764322 1 11111112222221 12245566788888999
Q ss_pred HHHHHhCCCcccCCC----ceeEEeeecCCcCCCCChhhHHHHHHHHHH
Q 019899 243 VAGLKQLGIRCSESS----AGLYCWADMSGLIPSYSEKGELELWDKLLN 287 (334)
Q Consensus 243 ~~~l~~~g~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 287 (334)
.+.|+++|+++.+.. .+..+.+.++. .+...++++.|.+
T Consensus 301 ~~~L~~~g~~v~p~~~~~~~~li~~i~l~~------~~~~~~~~~~l~~ 343 (431)
T 3ht4_A 301 AAFLEKLGMNTSPAWNAPRTDLIQSVQFDD------KDRMIAFCQAIQY 343 (431)
T ss_dssp HHHHHHHTCCEESCTTSCCSSSCCEEECCC------HHHHHHHHHHHHH
T ss_pred HHHHHhCcCEecCCCCCCCccEEEEEEeCC------HHHHHHHHHHHHh
Confidence 999999888764322 22244455542 2345577777444
No 224
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.90 E-value=1.7e-22 Score=185.64 Aligned_cols=288 Identities=15% Similarity=0.094 Sum_probs=184.5
Q ss_pred CCCCCCcEEEecCcHHHHHHHHHHhc--------C-----------------CC---CeEEecCCCCCChhhhhhhccCc
Q 019899 13 VSFDPSQIVLTAGATPAVEILCFCLA--------D-----------------HG---NALLVPSPYYPGFDRDIRFRTGV 64 (334)
Q Consensus 13 ~~~~~~~i~~~~g~~~~~~~~~~~l~--------~-----------------~g---d~vl~~~p~~~~~~~~~~~~~g~ 64 (334)
.+.+.+++++++|+++|+..++..+. . +| ++|++.+++|.++........|.
T Consensus 123 ~~~~~~~v~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~ 202 (472)
T 1ohv_A 123 APKGMSQLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHS 202 (472)
T ss_dssp CCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCS
T ss_pred CCCCcCEEEEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCC
Confidence 44467899999999999999998763 1 35 89999999998766544213332
Q ss_pred EE-----------EEEeCCC---C--CC--c-----cccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccC-CCHHHHH
Q 019899 65 EL-----------IPVHCRS---T--DN--F-----AFSITALDQAFNQARKRGVKVRGILICNPANPVGNI-IPRETLY 120 (334)
Q Consensus 65 ~v-----------~~v~~~~---~--~~--~-----~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~-~~~~~l~ 120 (334)
.. ..++++. . .. + ..|+++|++++++....+.++++|++...+|++|.+ .+.+.++
T Consensus 203 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~ 282 (472)
T 1ohv_A 203 KAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFR 282 (472)
T ss_dssp CHHHHTTSCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHH
T ss_pred ccccccCCCCCCCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHH
Confidence 11 1122210 0 00 0 236889999987643322367777666668889975 5788999
Q ss_pred HHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHh
Q 019899 121 ELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL 200 (334)
Q Consensus 121 ~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~ 200 (334)
+|.++|++||+++|+||+|.++.+.|.. ..+... +. .....+.||||.+ +.| |+++ ++++. .+...
T Consensus 283 ~l~~l~~~~g~lli~DEv~~g~g~~g~~-~~~~~~----gv--~~~~Di~t~sK~~-l~G---G~~~--~~~~~-~~~~~ 348 (472)
T 1ohv_A 283 KLRDISRKHGCAFLVDEVQTGGGSTGKF-WAHEHW----GL--DDPADVMTFSKKM-MTG---GFFH--KEEFR-PNAPY 348 (472)
T ss_dssp HHHHHHHHTTCEEEEECTTTTTTTTSSS-SGGGGG----CC--SSCCSEEEECGGG-SSE---EEEE--CGGGS-CSSSS
T ss_pred HHHHHHHHhCCEEEEeCcccCCCCCCCc-hhcccc----CC--CCCCCEEEEcccc-ccC---CccC--chhhc-ccccc
Confidence 9999999999999999999876554431 122111 01 0002234899994 233 6665 44442 11111
Q ss_pred --hcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCc----ccCCCceeEEeeecCCcCCC
Q 019899 201 --TRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL--GIR----CSESSAGLYCWADMSGLIPS 272 (334)
Q Consensus 201 --~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--g~~----~~~~~~g~~~~~~~~~~~~~ 272 (334)
...++.+++.+.++.++++..+ + ....++++++.+++.+.|+++ ++. ...+. |.+++++++..
T Consensus 349 ~~~~T~~~~~~~~aaa~aal~~~~---~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~~~-g~~~~~~~~~~--- 419 (472)
T 1ohv_A 349 RIFNTWLGDPSKNLLLAEVINIIK---R--EDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGR-GTFCSFDTPDE--- 419 (472)
T ss_dssp SSCCSSSSCHHHHHHHHHHHHHHH---H--TTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEE-TTEEEEECSSH---
T ss_pred cccCccCccHHHHHHHHHHHHHHH---h--CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEeecCC-ceEEEEEeCCh---
Confidence 2334568888887777764321 1 234566667777777777654 222 12333 45566676531
Q ss_pred CChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 273 YSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 273 ~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
....++...|++ +||.+.|+. .+++|++++. .+++++++++++|.+++++.
T Consensus 420 ---~~~~~~~~~l~~-~Gv~~~~~g------~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~ 471 (472)
T 1ohv_A 420 ---SIRNKLISIARN-KGVMLGGCG------DKSIRFRPTLVFRDHHAHLFLNIFSDILADF 471 (472)
T ss_dssp ---HHHHHHHHHHHH-TTEECEEET------TTEEEECCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred ---hHHHHHHHHHHH-CCeEEecCC------CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 234678888665 899998842 4689998875 69999999999999998765
No 225
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.82 E-value=5e-25 Score=200.41 Aligned_cols=290 Identities=13% Similarity=0.060 Sum_probs=192.0
Q ss_pred hhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChhhhhh---hccCc--EEEEEeCCCCCCc
Q 019899 5 MSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLA--DHGNALLVPSPYYPGFDRDIR---FRTGV--ELIPVHCRSTDNF 77 (334)
Q Consensus 5 ~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~---~~~g~--~v~~v~~~~~~~~ 77 (334)
+.+.+.+.++ ..+.+++++++++|+..++..+. ..+++|++.+++|.+...... ...|. .++.+|.
T Consensus 145 Lae~L~~~~p-~~~~v~~~nSGseA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~------ 217 (465)
T 2yky_A 145 FAEAVCDRFP-SIDLVRFTNSGTEANLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY------ 217 (465)
Confidence 3344444444 56789999999999999988752 456899999999977554322 01233 2333331
Q ss_pred cccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhh
Q 019899 78 AFSITALDQAFNQARKRGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEIL 156 (334)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~ 156 (334)
.|+++|++++++. +.++++|++...++++|.+. +.+.+++|.++|++||+++|+||+|. +.. +.. ... +.
T Consensus 218 -~d~~~l~~~l~~~---~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~-g~~-~a~-~~- 288 (465)
T 2yky_A 218 -NDVEGTADLLKRH---GHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRL-SGG-GAQ-EM- 288 (465)
Confidence 3788999988742 12677776654466799655 57789999999999999999999999 632 221 111 10
Q ss_pred hccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHH-------hhcccCCChHHHHHHHHhhCChHHHHHHHH
Q 019899 157 EAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKK-------LTRFCSISAPTQRLLISMLSDTKFIQEYLE 229 (334)
Q Consensus 157 ~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 229 (334)
.+....+.|+||.+| .|+|+||+++ ++++++.+.. ....++.|++++.++.+.++..+ + .
T Consensus 289 ------~gv~pDi~t~sK~lg-~G~piG~v~~-~~~i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~--~---~ 355 (465)
T 2yky_A 289 ------LGISADLTTLGKYIG-GGMSFGAFGG-RRDLMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIY--T---R 355 (465)
Confidence 222233568999999 5999999998 7888888765 23446778888888777775432 1 2
Q ss_pred HHHHHHHHHHHHHHHHHHhC----CCcccCCCceeEEeeecCC-cCCCC------ChhhHHHHHHHHHHhcCeEEcCCCC
Q 019899 230 TNKRRIKKLYDSFVAGLKQL----GIRCSESSAGLYCWADMSG-LIPSY------SEKGELELWDKLLNIAKINVTPGSA 298 (334)
Q Consensus 230 ~~~~~~~~~~~~~~~~l~~~----g~~~~~~~~g~~~~~~~~~-~~~~~------~~~~~~~~~~~ll~~~gi~v~~g~~ 298 (334)
...+++.++.+++.+.|++. ++....+..|.++|+.++. ..... .......+...|++ +||.+.|+..
T Consensus 356 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll~-~GV~v~p~~~ 434 (465)
T 2yky_A 356 QAASDLSASGDRFRANLNRIAVENQAPLQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHMLR-KGIYLAPRGM 434 (465)
Confidence 34455556666666666553 3333334467778887764 11000 01123467778664 8999998762
Q ss_pred cCCCCCCeEEEEecCCCcccHHHHHHHHHHHHHHc
Q 019899 299 CHCIEPGWFRCCFTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 299 ~~~~~~~~iRi~~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
+ . +++. .+++|++++++++.+++++.
T Consensus 435 -~----~---~s~~-~t~edid~~l~~l~~~l~~~ 460 (465)
T 2yky_A 435 -Y----A---LSLE-IADAGRDAFAEALADFIGEQ 460 (465)
Confidence 2 1 5554 79999999999999988764
No 226
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.87 E-value=5.3e-22 Score=175.59 Aligned_cols=284 Identities=11% Similarity=0.070 Sum_probs=191.6
Q ss_pred hhhhcCCCCCCC-CcEEE-ecCcHHHHHHHHHHhcCC--CCeEEecCCCCCCh--hhhhhhccCcEEEEEeCCCCCCccc
Q 019899 6 SQVLGQAVSFDP-SQIVL-TAGATPAVEILCFCLADH--GNALLVPSPYYPGF--DRDIRFRTGVELIPVHCRSTDNFAF 79 (334)
Q Consensus 6 ~~~~~~~~~~~~-~~i~~-~~g~~~~~~~~~~~l~~~--gd~vl~~~p~~~~~--~~~~~~~~g~~v~~v~~~~~~~~~~ 79 (334)
++.+++.+++++ ++|++ ++|+|+++++++..+..+ ||+|++....+.+. ...++ ..|..++.+++ +.++..
T Consensus 64 r~~la~ll~~~~~~evif~t~~~T~a~n~a~~~l~~~~~Gd~v~~~~~g~~~~~~~~~a~-~~G~~~~~~~~--~~~~~~ 140 (377)
T 3e77_A 64 ENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAK-KFGTINIVHPK--LGSYTK 140 (377)
T ss_dssp HHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHGGGSTTCEEEECCCSHHHHHHHHHHT-TTSEEEECSCC--CSSSCS
T ss_pred HHHHHHHhCCCCCCeEEEEcCchHHHHHHHHHhccCCCCCCeEEEEECCHHHHHHHHHHH-HhCCceEEecc--CCCcCC
Confidence 333444455654 47888 578999999999999765 89988776555433 22344 57887777776 334456
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
+++.++.++++ ++++|.+++..|.||++.| + +|+++|+++++|.+++. +..+.++..
T Consensus 141 ~~~~~~~~i~~------~t~lV~~~h~et~tG~~~p---i-----i~~~~~~~~~vD~~q~~----g~~~id~~~----- 197 (377)
T 3e77_A 141 IPDPSTWNLNP------DASYVYYCANETVHGVEFD---F-----IPDVKGAVLVCDMSSNF----LSKPVDVSK----- 197 (377)
T ss_dssp CCCGGGCCCCT------TCSCEEEESEETTTTEECS---S-----CCCCTTCCEEEECTTTT----TSSCCCGGG-----
T ss_pred CCChHHhccCC------CccEEEEeCccCchheEch---h-----hhccCCCEEEEEccccc----CCCCCchhh-----
Confidence 66766665654 7899999988999999999 4 36789999999999875 333344432
Q ss_pred ccCCCcEEEEecccccCCCCCceEEEEeecCHHHHH--------------HHHHhhcccCCChHHHHHHHHhhCChHHHH
Q 019899 160 EVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLA--------------AAKKLTRFCSISAPTQRLLISMLSDTKFIQ 225 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 225 (334)
.+ +++.|.+|.+|++| +|+++.+ +++.+ ..+....+++++....+++..+++. +.
T Consensus 198 ---~~--~~~~s~~K~~gp~G--~g~l~~~-~~~l~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~---l~ 266 (377)
T 3e77_A 198 ---FG--VIFAGAQKNVGSAG--VTVVIVR-DDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEW---IK 266 (377)
T ss_dssp ---CS--EEEEEGGGTTSCTT--CEEEEEE-TTSCSCCCTTSCGGGCHHHHHTTTTCSSCCCHHHHHHHHHHHHH---HH
T ss_pred ---cC--EEEEecccccCCCc--cEEEEEc-HHHHhhccCCCCchhhHHHHhhcCCCCCCchHHHHHHHHHHHHH---HH
Confidence 33 36679999999778 5666663 33211 1111223345666676777666643 23
Q ss_pred H--HHHHHHHHHHHHHHHHHHHHHhC-CCcccC----CCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCC
Q 019899 226 E--YLETNKRRIKKLYDSFVAGLKQL-GIRCSE----SSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSA 298 (334)
Q Consensus 226 ~--~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~ 298 (334)
+ -+++..++.++..+++.+.|+++ |+.+.. ...+..+.+.++..... ..-...+... ++++||.+.+|..
T Consensus 267 ~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~~--~~~~~~~l~~-l~~~Gi~~~~g~~ 343 (377)
T 3e77_A 267 NNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKGD--DALEKRFLDK-ALELNMLSLKGHR 343 (377)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEESSTTCC--HHHHHHHHHH-HHHTTEESCBCCT
T ss_pred HccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcCCCCCc--hhHHHHHHHH-HHHCCcEEeCCCC
Confidence 3 36778888999999999999987 776422 12344455677653210 0011245566 4468999988763
Q ss_pred cCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 299 CHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 299 ~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
. .+.+|+|+.. .|++|++.+++.|+++++++
T Consensus 344 ~----~g~iRiS~~~~~t~edId~l~~al~~~~~~~ 375 (377)
T 3e77_A 344 S----VGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 375 (377)
T ss_dssp T----TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred c----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHc
Confidence 2 3569999986 59999999999999999876
No 227
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.86 E-value=8.4e-22 Score=175.32 Aligned_cols=281 Identities=8% Similarity=0.024 Sum_probs=188.4
Q ss_pred hhhhcCCCCCCC-CcEEE-ecCcHHHHHHHHHHhcCCCCeEEecCCCCCCh--hhhhhhccCcEEEEEeCC-CCCCcccc
Q 019899 6 SQVLGQAVSFDP-SQIVL-TAGATPAVEILCFCLADHGNALLVPSPYYPGF--DRDIRFRTGVELIPVHCR-STDNFAFS 80 (334)
Q Consensus 6 ~~~~~~~~~~~~-~~i~~-~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~--~~~~~~~~g~~v~~v~~~-~~~~~~~~ 80 (334)
++.+++.++++. ++|++ |+|+|+++++++..+.++||+|++..-.+.+. ...++ ..| ++..++++ ++++..++
T Consensus 78 r~~la~ll~~~~~~evif~t~~~T~a~n~ai~~l~~~gd~v~~~~~~~~~~~~~~~a~-~~G-~v~~v~~~~~~~G~~~~ 155 (386)
T 3qm2_A 78 EQDFRDLLNIPSNYKVLFCHGGGRGQFAGVPLNLLGDKTTADYVDAGYWAASAIKEAK-KYC-APQIIDAKITVDGKRAV 155 (386)
T ss_dssp HHHHHHHHTCCTTEEEEEEESCTTHHHHHHHHHHCTTCCEEEEEESSHHHHHHHHHHT-TTS-EEEEEECEEEETTEEEE
T ss_pred HHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhccCCCCeEEEEeCCHHHHHHHHHHH-HhC-CeEEEecCcccCCCCCC
Confidence 344444555654 47888 68999999999999999999987554433332 22334 578 89888873 12443477
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccC-CCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNI-IPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAE 159 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
++++++++++ ++++|.+++..|.||++ .| +++|. +|+++++|.+++. +..+.++..
T Consensus 156 ~~~~~~~l~~------~t~lV~~~h~et~tG~~i~p---i~~i~-----~g~~~~vDa~qs~----g~~pidv~~----- 212 (386)
T 3qm2_A 156 KPMREWQLSD------NAAYLHYCPNETIDGIAIDE---TPDFG-----PEVVVTADFSSTI----LSAPLDVSR----- 212 (386)
T ss_dssp CCGGGCCCCT------TCSCEEECSEETTTTEECCC---CCCCC-----TTCCEEEECTTTT----TSSCCCGGG-----
T ss_pred chHHHhhcCC------CCcEEEEECCcCCcCEecCc---hhhhc-----CCCEEEEEccccc----CCCCCCccc-----
Confidence 8888777765 78999999888999996 77 44443 7999999999875 333344432
Q ss_pred ccCCCcEEEEecccccCCCCCceEEEEeecCHHHHH--------------HHHHhhcccCCChHHHHHHHHhhCChHHHH
Q 019899 160 EVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLA--------------AAKKLTRFCSISAPTQRLLISMLSDTKFIQ 225 (334)
Q Consensus 160 ~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 225 (334)
.+ +++.|.+|++|++| +|+++. ++++.+ ..+....+++.+.....++..+++. +.
T Consensus 213 ---~~--~~~~s~hK~lGP~G--~g~l~v-~~~~~~~~~~~~p~~~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~---~~ 281 (386)
T 3qm2_A 213 ---YG--VIYAGAQKNIGPAG--LTLVIV-REDLLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKW---LK 281 (386)
T ss_dssp ---CS--EEEEETTTTTCCTT--EEEEEE-EGGGCSCCCTTSCGGGCHHHHHHC-------CCSHHHHHHHHHHH---HH
T ss_pred ---cC--EEEEecccccCCCc--cEEEEE-CHHHHhhhcccCCcHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHH---HH
Confidence 33 35689999998677 688877 333321 1111122345666677777776643 23
Q ss_pred H--HHHHHHHHHHHHHHHHHHHHHhCCCc-cc-CC--CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCc
Q 019899 226 E--YLETNKRRIKKLYDSFVAGLKQLGIR-CS-ES--SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSAC 299 (334)
Q Consensus 226 ~--~~~~~~~~~~~~~~~~~~~l~~~g~~-~~-~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~ 299 (334)
+ -+++..++.++.++++.+.|++.++. .. .+ ..+..+.+.+|.. ..+ .++... ++++||.+.+|..+
T Consensus 282 ~~gG~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~iv~f~~~~~-----~~~-~~~~~~-L~~~gI~~~~g~~~ 354 (386)
T 3qm2_A 282 AQGGVAAMHKINQQKAELLYGVIDNSDFYRNDVAQANRSRMNVPFQLADN-----TLD-KVFLEE-SFAAGLHALKGHRV 354 (386)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHHTCSSEECCBCGGGBCSSEEEEEESSG-----GGH-HHHHHH-HHHTTEECCBCCTT
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHcCceEEEEECCCc-----ccc-HHHHHH-HHHCCCEEeCCCCC
Confidence 3 36778888999999999999988762 21 11 2233455666641 012 456666 66789999887654
Q ss_pred CCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 300 HCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 300 ~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
.+.+|+|+.. .|++|++++++.|+++.+++
T Consensus 355 ----~~~iRiS~~~~~t~edId~l~~~l~~~~~~~ 385 (386)
T 3qm2_A 355 ----VGGMRASIYNAMPIEGVKALTDFMIDFERRH 385 (386)
T ss_dssp ----TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred ----cCeEEEEcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 2459999986 59999999999999999876
No 228
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.86 E-value=1.2e-20 Score=178.66 Aligned_cols=291 Identities=10% Similarity=0.011 Sum_probs=176.2
Q ss_pred CcEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccc---------cHHHHHHHH
Q 019899 18 SQIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAF---------SITALDQAF 88 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~---------~~~~l~~~l 88 (334)
..+++++|++.|+.+++.+++++||+|+++.++|.++...+. ..|+++++++... +.+++ |++++++++
T Consensus 212 ~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~-lsGa~pv~v~~~~-~~~gi~~~i~~~~~d~e~Le~~l 289 (715)
T 3n75_A 212 RSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMM-MSDVTPIYFRPTR-NAYGILGGIPQSEFQHATIAKRV 289 (715)
T ss_dssp EEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHH-HSCCEEEEECCCB-CTTCCBCCCCGGGGSHHHHHHHH
T ss_pred CceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHH-HcCCEEEEEeccc-cccccccCcccccCCHHHHHHHH
Confidence 346677777899999999999999999999999999999998 8999999998753 34443 899999999
Q ss_pred HHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccc-cCCCCcchhhhhhhccccCCCcE-
Q 019899 89 NQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSI-FGNEEFVSMAEILEAEEVDKDRV- 166 (334)
Q Consensus 89 ~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~- 166 (334)
++... .+.++++++++| ||+|.+++ +++|.++|++++ +++||+|+... +.+ .......+.. +...+.+
T Consensus 290 ~~~~~-~k~p~~vivt~p-n~~G~v~d---l~~I~ela~~~~--livDEAH~~~~~f~~-~~~~~~al~~--g~~aD~vi 359 (715)
T 3n75_A 290 KETPN-ATWPVHAVITNS-TYDGLLYN---TDFIKKTLDVKS--IHFDSAWVPYTNFSP-IYEGKCGMSG--GRVEGKVI 359 (715)
T ss_dssp HHSTT-CCSCSEEEEESS-CTTSEEEC---HHHHHHHCCCSE--EEEECTTCTTGGGSG-GGTTSSTTSS--SCCTTCEE
T ss_pred hhCcC-ccCceEEEEECC-CCCCccCC---HHHHHHHhCcCc--EEEccccccccccCC-cccccccccc--CcCCCEEE
Confidence 86310 112348999999 99999999 788888887663 78999998643 321 1111111110 0002333
Q ss_pred EEEecccccCCCCCceEEEEeecCHHHHHHHHHh---hcccCCChHHHHHHHHhhCChHHHH-HHHHHHHHHHHHHHHHH
Q 019899 167 HIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL---TRFCSISAPTQRLLISMLSDTKFIQ-EYLETNKRRIKKLYDSF 242 (334)
Q Consensus 167 ~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~ 242 (334)
+++.|+||+++.. -..|++.++++-..+.+.+. ....+++.+...++..+++. ++ ....++.+++.++.+++
T Consensus 360 i~~~S~hKtL~gl-tqgs~i~v~~~i~~~~~~~~~~~~~STSpsy~~~AsldaA~~~---~~~~~g~~~~~~l~~~a~~~ 435 (715)
T 3n75_A 360 YETQSTHKLLAAF-SQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAM---MKGNAGKRLINGSIERAIKF 435 (715)
T ss_dssp EEEECHHHHSSCC-TTCEEEEEESCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHH---HSHHHHHHHHHHHHHHHHHH
T ss_pred EEEecccccccCC-CCeeEEEeCchhhHHHHHHHHHhhcCCCchHHHHHHHHHHHHH---HHhhccHHHHHHHHHHHHHH
Confidence 5689999998522 12477777443222233322 22233444444444444321 12 12244566677777777
Q ss_pred HHHHHhC-----C--CcccCCC-----------------------ceeE------EeeecCCcC-CC---CChhhHHHHH
Q 019899 243 VAGLKQL-----G--IRCSESS-----------------------AGLY------CWADMSGLI-PS---YSEKGELELW 282 (334)
Q Consensus 243 ~~~l~~~-----g--~~~~~~~-----------------------~g~~------~~~~~~~~~-~~---~~~~~~~~~~ 282 (334)
++.|++. + +++..++ .+.+ +.+.+++.. ++ .....+.++.
T Consensus 436 r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~Kl~i~~~~~~~~G~~~~~Gi~g~~~~ 515 (715)
T 3n75_A 436 RKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMEKDGTMSDFGIPASIVA 515 (715)
T ss_dssp HHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTTEEEEECSCBCTTSCBCSSCCCHHHHH
T ss_pred HHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCCeEEEEEcCCCCCCCccccCCCcHHHHH
Confidence 7777654 1 2222211 0111 223333211 00 0123445666
Q ss_pred HHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHH
Q 019899 283 DKLLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAE 331 (334)
Q Consensus 283 ~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~ 331 (334)
+. |+++||.+.-.. ..++-+-++. .+++++++++++|.++-+
T Consensus 516 ~~-L~~~~I~~E~~d------~~~vl~l~s~g~~~~~~~~L~~aL~~~~~ 558 (715)
T 3n75_A 516 KY-LDEHGIVVEKTG------PYNLLFLFSIGIDKTKALSLLRALTDFKR 558 (715)
T ss_dssp HH-HHHTTCCCSEEE------TTEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred HH-HHHCCCEEEecC------CCcEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 66 567899875322 2344444442 688899999999887754
No 229
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.86 E-value=3.5e-19 Score=157.39 Aligned_cols=306 Identities=15% Similarity=0.191 Sum_probs=199.8
Q ss_pred hhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCC----CCeEEecCCCCCChhhhhhhccCcEEEEEeCC-CCCCc
Q 019899 3 GFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADH----GNALLVPSPYYPGFDRDIRFRTGVELIPVHCR-STDNF 77 (334)
Q Consensus 3 ~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~----gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~-~~~~~ 77 (334)
+|++.. | ++ .....++++|+|.++.+++.+.+++ +|+|++|..+|.+...++. +.|+++++++.. +++..
T Consensus 124 d~L~~~-G--~~-~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAli-L~Gl~Pv~V~p~~d~~~~ 198 (501)
T 3hl2_A 124 DIIKLA-G--VH-TVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMI-TAGFEPVVIENVLEGDEL 198 (501)
T ss_dssp HHHHHT-T--CT-TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHH-HTTCEEEEECEEEETTEE
T ss_pred HHHHHc-C--CC-CCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHH-HcCCeEEEEeeeeccccc
Confidence 567763 3 43 2346999999998888887777653 4999999999999999999 999999999852 23457
Q ss_pred cccHHHHHHHHHHHHHcCCceeEEEEeCC-CCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhh
Q 019899 78 AFSITALDQAFNQARKRGVKVRGILICNP-ANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEIL 156 (334)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~~~~~~i~~~~p-~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~ 156 (334)
.+|++.++++|++. +....++++++| .|-.+.+.+ +++|.++|++||+++++|++|+... ..+..+.
T Consensus 199 ~id~e~le~aI~e~---ga~~i~~V~~Ttt~y~p~~~dd---I~eIaeIch~~gIpllVDeAhGah~------~~~~~lp 266 (501)
T 3hl2_A 199 RTDLKAVEAKVQEL---GPDCILCIHSTTSCFAPRVPDR---LEELAVICANYDIPHIVNNAYGVQS------SKCMHLI 266 (501)
T ss_dssp EECHHHHHHHHHHH---CGGGEEEEEEECSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTCTTC------HHHHHHH
T ss_pred CCCHHHHHHHHHhc---CCCcEEEEEecCCCCCCccccc---HHHHHHHHHHcCCeEEEeCcchhhh------hhhhhhH
Confidence 89999999999986 212333444444 554556677 9999999999999999999997632 1111111
Q ss_pred hccccCCC-cEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCC-ChHHHHHHHHhhCChHHHHHHHHHHHHH
Q 019899 157 EAEEVDKD-RVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSI-SAPTQRLLISMLSDTKFIQEYLETNKRR 234 (334)
Q Consensus 157 ~~~~~~~~-~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 234 (334)
.+ .+..+ .++++.|.+|.+- ..+..+.+..+++++.+.+... .+++. +.++...+..++..+ .+.+.++.++
T Consensus 267 ~s-A~~~GrAD~vVqS~HK~ll-vpIGG~ii~~~d~e~l~~~~~~-yPGr~S~Spsldl~~tLL~lG---r~Gy~~ll~e 340 (501)
T 3hl2_A 267 QQ-GARVGRIDAFVQSLDKNFM-VPVGGAIIAGFNDSFIQEISKM-YPGRASASPSLDVLITLLSLG---SNGYKKLLKE 340 (501)
T ss_dssp HH-HHHHSCCCEEEEEHHHHHC-CCSSCEEEEESCHHHHHHHHHT-SCSCBCSHHHHHHHHHHHHHH---HHHHHHHHHH
T ss_pred HH-HHhcCCCcEEEecccccce-eecCceEEEeCCHHHHHHHHHh-CCCCCCCcHHHHHHHHHHHHH---HHHHHHHHHH
Confidence 11 11134 6678889999984 4344566666788877776432 22222 333333344443322 4445777777
Q ss_pred HHHHHHHHHHHHHhC----CCcccC-CCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCe---E-EcCCC--------
Q 019899 235 IKKLYDSFVAGLKQL----GIRCSE-SSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKI---N-VTPGS-------- 297 (334)
Q Consensus 235 ~~~~~~~~~~~l~~~----g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi---~-v~~g~-------- 297 (334)
..++.+++.+.|+++ |-++.. +.+...+.+.+...... .......+-..|+. ++| . |.+|.
T Consensus 341 ~~ela~~L~~~L~~la~~~ge~ll~~~~n~is~a~tl~~~~~~-~~~~~t~~gs~Lf~-r~vsG~Rvv~~~~~~~i~g~~ 418 (501)
T 3hl2_A 341 RKEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEH-RDKAVTQLGSMLFT-RQVSGARVVPLGSMQTVSGYT 418 (501)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCBCCCTTCSSEEEEECTTSCTT-TSCHHHHHHHHHHH-TTCCSCEEECTTCCEEETTEE
T ss_pred HHHHHHHHHHHHHHHHHhcChhhcCCCCCceeEEEeccccccc-ccccHHHHHHHHHh-cCCCcceeecCCCceEECCee
Confidence 888888888888774 555543 33555665666544221 11223345555444 565 2 44555
Q ss_pred --CcCCCC----CCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 298 --ACHCIE----PGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 298 --~~~~~~----~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
.||... ..|+-++.+- ++.+|++.++++|.+++.+.
T Consensus 419 f~~~g~h~~~~~~~yl~~a~aiG~~~~~v~~~~~~l~~~~~~~ 461 (501)
T 3hl2_A 419 FRGFMSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAV 461 (501)
T ss_dssp ESSTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ecCcccCCCCCCchHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 444421 2578777653 79999999999999998763
No 230
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.85 E-value=2e-20 Score=164.93 Aligned_cols=279 Identities=11% Similarity=0.130 Sum_probs=185.7
Q ss_pred hhhhcCCCCCC-CCcEEE-ecCcHHHHHHHHHHhcCCCCeEEe-cCCCCCC-hhhhhhhccCcEEEEEeCCCCCCccccH
Q 019899 6 SQVLGQAVSFD-PSQIVL-TAGATPAVEILCFCLADHGNALLV-PSPYYPG-FDRDIRFRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 6 ~~~~~~~~~~~-~~~i~~-~~g~~~~~~~~~~~l~~~gd~vl~-~~p~~~~-~~~~~~~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
++.+++.++++ +++|++ |+|+|+++++++..+. +||++++ .+..|.. ....++ ..|.++..++++....+.+++
T Consensus 56 r~~la~ll~~~~~~~v~f~t~~~T~a~n~~~~~~~-~~~~~~~i~~~~~~~~~~~~a~-~~G~~v~~~~~~~~g~~~~~~ 133 (361)
T 3m5u_A 56 QEKAKKLYELNDDYEVLFLQGGASLQFAMIPMNLA-LNGVCEYANTGVWTKKAIKEAQ-ILGVNVKTVASSEESNFDHIP 133 (361)
T ss_dssp HHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHC-CSSCEEEEECSHHHHHHHHHHH-HTTCCEEEEEECTTTTSCSCC
T ss_pred HHHHHHHhCCCCCceEEEEcCcHHHHHHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHH-HcCCceEEEecccCcCCCcCC
Confidence 33444445565 347887 9999999999999998 7886532 2222221 222344 578999999975332222445
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhcccc
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEV 161 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
+. + |++ ++++|.+++..|.||.+++. +++ +|+++++|.+++. +....++.
T Consensus 134 ~~-~--l~~------~t~lv~~~~~e~~tG~~~~~--------i~~-~~~~~~vD~~q~~----g~~~id~~-------- 183 (361)
T 3m5u_A 134 RV-E--FSD------NADYAYICSNNTIYGTQYQN--------YPK-TKTPLIVDASSDF----FSRKVDFS-------- 183 (361)
T ss_dssp CC-C--CCT------TSSEEEEESEETTTTEECSS--------CCC-CSSCEEEECGGGT----TSSCCCCT--------
T ss_pred hh-h--cCC------CCCEEEEeCCCCCcceeCCc--------ccc-cCCEEEEEccccc----CCCCCCcc--------
Confidence 54 3 654 78999999888999999772 233 4999999999875 22223332
Q ss_pred CCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHH---------------hhcccCCChHHHHHHHHhhCChHHHHH
Q 019899 162 DKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKK---------------LTRFCSISAPTQRLLISMLSDTKFIQE 226 (334)
Q Consensus 162 ~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~l~~~~~~~~ 226 (334)
+.++++.|.+|++|++| +|+++. ++++.+.++. ...+++++.....++..+++ ++.+
T Consensus 184 --~~d~~~~s~~K~~gp~G--~g~l~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~---~l~~ 255 (361)
T 3m5u_A 184 --NIALFYGGVQKNAGISG--LSCIFI-RKDMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMD---WLLN 255 (361)
T ss_dssp --TEEEEEEETTTTSSCTT--CEEEEE-EHHHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHH---HHHT
T ss_pred --cCCEEEEechhccCCCc--cEEEEE-cHHHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHH---HHHH
Confidence 23477889999998777 688887 6777665543 11224556666666666654 2233
Q ss_pred H--HHHHHHHHHHHHHHHHHHHHhCC-C-cccCC---CceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEcCCCCc
Q 019899 227 Y--LETNKRRIKKLYDSFVAGLKQLG-I-RCSES---SAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVTPGSAC 299 (334)
Q Consensus 227 ~--~~~~~~~~~~~~~~~~~~l~~~g-~-~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~ 299 (334)
. +++..++.++..+++.+.|++++ + ....+ ..+..+.+.+|.... .+ .++... ++++||.+.+|...
T Consensus 256 ~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~----~~-~~~~~~-L~~~gI~~~~g~~~ 329 (361)
T 3m5u_A 256 QGGLDKVHEKNSQKATMLYECIDLSNGFYKGHADKKDRSLMNVSFNIAKNKD----LE-PLFVKE-AEEAGMIGLKGHRI 329 (361)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTSTTSEEESSCGGGBCSSEEEEEESSCTT----HH-HHHHHH-HHHTTEECCBCCTT
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHCCCeeeccCCHHHcCCeEEEEECCCchh----hh-HHHHHH-HHHCCCEEecCCCc
Confidence 2 57778888999999999999886 5 44322 123345566664111 12 356655 66789999887652
Q ss_pred CCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHHcC
Q 019899 300 HCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAETCK 334 (334)
Q Consensus 300 ~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~~ 334 (334)
.+.+|+|+.. .|++|++++++.|+++.++++
T Consensus 330 ----~g~iRiS~~~~~t~edId~l~~al~~~~~~~~ 361 (361)
T 3m5u_A 330 ----LGGIRASIYNALNLDQVKTLCEFMKEFQGKYA 361 (361)
T ss_dssp ----TCSEEEECCTTSCHHHHHHHHHHHHHHHHHHC
T ss_pred ----cCeEEEEccCCCCHHHHHHHHHHHHHHHHhcC
Confidence 2459999986 599999999999999998864
No 231
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.82 E-value=8.3e-19 Score=158.51 Aligned_cols=279 Identities=16% Similarity=0.099 Sum_probs=173.5
Q ss_pred CCCcEEEecCcHHHHHHHHHHhc--CCCCeEEecCCCCCChhhhhhhc-----cCcEEEEEeCCCCCCccccHHHHHHHH
Q 019899 16 DPSQIVLTAGATPAVEILCFCLA--DHGNALLVPSPYYPGFDRDIRFR-----TGVELIPVHCRSTDNFAFSITALDQAF 88 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~-----~g~~v~~v~~~~~~~~~~~~~~l~~~l 88 (334)
..+.+++++++++|+..++.... ...++|+....+|.+........ .......+|. .|++.+++.+
T Consensus 142 ~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~-------nd~~~l~~~l 214 (454)
T 4ao9_A 142 QIEQLRFTNSGTEANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY-------NDAQTARAQI 214 (454)
T ss_dssp TCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT-------TCHHHHHHHH
T ss_pred CCCEEEEeCchHHHHHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCC-------chHHHHHHHH
Confidence 46789999999999999987653 34568888888887654332201 1123334442 3788999988
Q ss_pred HHHHHcCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEEEEeccccccccCCCCc-chhhhhhhccccCCCcE
Q 019899 89 NQARKRGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHVISDEIYGGSIFGNEEF-VSMAEILEAEEVDKDRV 166 (334)
Q Consensus 89 ~~~~~~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 166 (334)
++. +.++.+|++...+...|.+. +.+.+++|.++|++||+++|+||++.+ ..|..+ .....+ .+|
T Consensus 215 ~~~---~~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG--R~G~~~a~e~~gv------~PD-- 281 (454)
T 4ao9_A 215 ERH---GPEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS--RLAPHGLANKLGI------RSD-- 281 (454)
T ss_dssp HHT---GGGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG--GGSTTCHHHHHTC------CCS--
T ss_pred hhc---CCceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC--CCccccchhccCC------CCc--
Confidence 763 23566555543366777765 566799999999999999999999874 222222 122222 122
Q ss_pred EEEecccccCCCCCceEEEEeecCHHHHHHHHHh------hcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHH
Q 019899 167 HIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKL------TRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRIKKLYD 240 (334)
Q Consensus 167 ~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 240 (334)
+.+++|.+| .|+++|.+++ ++++.+.+... ..+++.|+.+..+..+.++..+. .+..+++.++.+
T Consensus 282 --i~t~gK~lg-gG~Piga~~~-~~ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~-----~~~~~~~~~~g~ 352 (454)
T 4ao9_A 282 --LTTLGKYIG-GGMSFGAFGG-RADVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFT-----PEAAGALAERGE 352 (454)
T ss_dssp --EEEEEGGGG-TTSSCEEEEE-CHHHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSC-----HHHHHHHHHHHH
T ss_pred --EEEeccccC-CCCcceeeee-HHHHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhc-----cChhHHHHHHHH
Confidence 236889998 8899999998 88888877532 23456788888777666643210 122334444445
Q ss_pred HHHHHHHh----CCCcccCCCceeEEeeecCCc-CCC------CChhhHHHHHHHHHHhcCeEEcCCCCcCCCCCCeEEE
Q 019899 241 SFVAGLKQ----LGIRCSESSAGLYCWADMSGL-IPS------YSEKGELELWDKLLNIAKINVTPGSACHCIEPGWFRC 309 (334)
Q Consensus 241 ~~~~~l~~----~g~~~~~~~~g~~~~~~~~~~-~~~------~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi 309 (334)
++.+.|++ .++......-|.++.+.+.+. ... ....-...+...|++ +||.+.|.. ++.+
T Consensus 353 ~l~~~L~~l~~~~~~~~~vrg~G~m~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~ll~-~Gv~~~p~~--------~~~~ 423 (454)
T 4ao9_A 353 ALRARLNALCANEGVAMQFTGIGSLMNAHFVQGDVRSSEDLAAVDGRLRQLLFFHLLN-EDIYSSPRG--------FVVL 423 (454)
T ss_dssp HHHHHHHHHHHHHTBSCEEEEETTEEEEESCCSCCCSGGGGTTCCHHHHHHHHHHHHH-TTEECCTTC--------EEEC
T ss_pred HHHHHHHHHHhhCCCCEEEeeeceEEEEEEecCCCCCHHHHHhhhHHHHHHHHHHHHH-CCEEEcCCC--------CEEE
Confidence 55555544 343322122233444444321 111 111122345566555 799987733 3444
Q ss_pred EecCCCcccHHHHHHHHHHHHHHc
Q 019899 310 CFTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 310 ~~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
++. .|++||+++++++.++++++
T Consensus 424 s~~-~T~~dId~~l~al~~~l~~~ 446 (454)
T 4ao9_A 424 SLP-LTDADIDRYVAAIGSFIGGH 446 (454)
T ss_dssp CTT-CCHHHHHHHHHHHHHHHHHS
T ss_pred eCC-CCHHHHHHHHHHHHHHHHhc
Confidence 544 79999999999999999875
No 232
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.81 E-value=2.7e-18 Score=151.03 Aligned_cols=288 Identities=14% Similarity=0.122 Sum_probs=186.1
Q ss_pred CCCCCCC----cEEEecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhh--------hhccC--cEEEEEeCCCCCCc
Q 019899 12 AVSFDPS----QIVLTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDI--------RFRTG--VELIPVHCRSTDNF 77 (334)
Q Consensus 12 ~~~~~~~----~i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~--------~~~~g--~~v~~v~~~~~~~~ 77 (334)
.|+++.. ||-+-+ +++|+..++.++++|||+|+-.+..++++...- . ..| .+++.+++++ +..
T Consensus 112 lF~a~~A~w~VNVQP~S-Gs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~-~sg~~~~~~~Y~vd~-~t~ 188 (490)
T 3ou5_A 112 AFDLDPAQWGVNVQPYS-GSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRIS-ATSIFFESMPYKLNP-KTG 188 (490)
T ss_dssp HTTCCTTTEEEECCCSS-HHHHHHHHHHHHCC-CCCEECBC-----------------------------CBCEET-TTT
T ss_pred HhCCCccccCCCCCcCC-HHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccc-cccccccccccccCC-CCC
Confidence 3555555 455444 556999999999999999999988777664432 1 122 2444555543 455
Q ss_pred cccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEecccccc-ccCCCCcchhhhhh
Q 019899 78 AFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGS-IFGNEEFVSMAEIL 156 (334)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~-~~~~~~~~~~~~~~ 156 (334)
.+|.+++++..+.. +|++|++-...+| ..+| .+++.++|++.|.++++|-+|... .-+|.-+.++ +
T Consensus 189 ~IDyd~~~~~A~~~-----kPklIi~G~SaY~--r~id---~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~-~-- 255 (490)
T 3ou5_A 189 LIDYNQLALTARLF-----RPRLIIAGTSAYA--RLID---YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPF-K-- 255 (490)
T ss_dssp EECHHHHHHHHHHH-----CCSEEEECCSSCC--SCCC---HHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGG-G--
T ss_pred cccHHHHHHHHhhc-----CCCeEEECCccCc--cccC---HHHHHHHHhhcccEEEechhhhhhhhcccccCCcc-c--
Confidence 89999999999887 9997777665665 5677 788888888999999999998543 3333222222 1
Q ss_pred hccccCCCcEEEEecccccCCCCCceEEEEeecCH--------------HHHHHHHHhhcc-cCCChHHHHHHHHhhCCh
Q 019899 157 EAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNE--------------SVLAAAKKLTRF-CSISAPTQRLLISMLSDT 221 (334)
Q Consensus 157 ~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~--------------~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~ 221 (334)
. .+++.+|.+|++ .|.|.|.|++++. ++.+.+.+.-.+ ...+++....++.+....
T Consensus 256 ------~-ADvVTtTTHKTL--rGPrGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~ 326 (490)
T 3ou5_A 256 ------H-ADIVTTTTHKTL--RGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALK 326 (490)
T ss_dssp ------T-CSEEEEESSSTT--CSCSCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHH
T ss_pred ------c-ceEEeccccccc--cCCCceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHH
Confidence 2 357788999999 7778899998542 455666654333 233444444444444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc-CCCceeEEeeecCCcCCCCChhhHHHHHHHHHHhcCeEEc----CC
Q 019899 222 KFIQEYLETNKRRIKKLYDSFVAGLKQLGIRCS-ESSAGLYCWADMSGLIPSYSEKGELELWDKLLNIAKINVT----PG 296 (334)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~----~g 296 (334)
+.+...+..+.+++.++++.|.+.|.+.|++++ ....+..+++++..... +. ..+..+|++.||.+. |+
T Consensus 327 Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~G~~vvsGgTdnHlvLvDl~~~g~-----tG-~~ae~~Le~agItvNkN~iP~ 400 (490)
T 3ou5_A 327 QACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGL-----DG-ARAERVLELVSITANKNTCPG 400 (490)
T ss_dssp HHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTC-----CH-HHHHHHHHHTTEECEEECCTT
T ss_pred HHHhHhHHHHHHHHHHHHHHHHHHHHhCCCeeecCCCCceEEEEeccccCC-----CH-HHHHHHHHHcCcEECCCCCCC
Confidence 444556688899999999999999999999986 44456667788754321 22 445555888999875 44
Q ss_pred CCcCCCCCCeEEEEecC-----CCcccHHHHHHHHHHHHH
Q 019899 297 SACHCIEPGWFRCCFTS-----LTHEDIPLVIERIQKVAE 331 (334)
Q Consensus 297 ~~~~~~~~~~iRi~~~~-----~~~~~l~~~l~~l~~~~~ 331 (334)
. -.+-.++.|||+... ..++|++++.+.|.+++.
T Consensus 401 D-~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l~ 439 (490)
T 3ou5_A 401 D-RSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp C-CCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred C-CCCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 3 122235689999653 467888888888877664
No 233
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.80 E-value=2.4e-17 Score=147.52 Aligned_cols=307 Identities=15% Similarity=0.159 Sum_probs=186.0
Q ss_pred hhhhhhhcCCCCCCCCcEEEecCcHHHHHHHHHHhcCC----CCeEEecCCCCCChhhhhhhccCcEEEEEeCCC-CCCc
Q 019899 3 GFMSQVLGQAVSFDPSQIVLTAGATPAVEILCFCLADH----GNALLVPSPYYPGFDRDIRFRTGVELIPVHCRS-TDNF 77 (334)
Q Consensus 3 ~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~l~~~----gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~-~~~~ 77 (334)
.|+.+.+| ++ +....++++|+|.+.++++.+.+++ ++.|+++..+|.++..++. ..|..++.++... ++..
T Consensus 105 ~~~~~~lG--lp-~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~-l~Gl~p~~v~~~~~~~~~ 180 (450)
T 3bc8_A 105 LNVIKLAG--VH-SVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMV-TAGFEPVVIENVLEGDEL 180 (450)
T ss_dssp HHHHHHHT--CT-TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHH-HTTCEEEEECCEEETTEE
T ss_pred HHHHHhCC--CC-CCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHH-HcCCeeEEEEeeecCccC
Confidence 45555555 33 2335699999986665555554443 8999999999999999999 9999998887532 3467
Q ss_pred cccHHHHHHHHHHHHHcCCceeEEEEeCC-CCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhh
Q 019899 78 AFSITALDQAFNQARKRGVKVRGILICNP-ANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEIL 156 (334)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~~~~~~i~~~~p-~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~ 156 (334)
.+|++.|+++|++... ...++++++| ++.+|.+.| +++|+++|++||++++||++|+.... ....+.
T Consensus 181 ~id~~~le~aI~~~~~---~~~~~Vv~t~t~~g~g~~dd---l~~Ia~ia~~~gi~l~VD~A~G~~~~------~~~~l~ 248 (450)
T 3bc8_A 181 RTDLKAVEAKIQELGP---EHILCLHSTTACFAPRVPDR---LEELAVICANYDIPHVVNNAYGLQSS------KCMHLI 248 (450)
T ss_dssp ECCHHHHHHHHHHHCG---GGEEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCH------HHHHHH
T ss_pred CcCHHHHHHHHHhcCC---CCEEEEEEECCcCCCceecC---HHHHHHHHHHCCCeEEEECCCchhhh------hhHhHH
Confidence 8999999999987521 2345666667 556778888 99999999999999999999985321 122221
Q ss_pred hccccC-CCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHHhhcccCCChHHHHHHHHhhCChHHHHHHHHHHHHHH
Q 019899 157 EAEEVD-KDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKKLTRFCSISAPTQRLLISMLSDTKFIQEYLETNKRRI 235 (334)
Q Consensus 157 ~~~~~~-~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 235 (334)
.+ .++ .+-+.++.|.+|++. .....+++..++++..+.+...-.....+.++......++.. ..+.+.+..++.
T Consensus 249 ~~-a~~~~~AD~~v~S~HK~l~-a~~~~~~l~~rd~~~~~~~~~~~~g~~s~SpsL~l~~~l~~~---G~~g~~~~i~~~ 323 (450)
T 3bc8_A 249 QQ-GARVGRIDAFVQSLDKNFM-VPVGGAIIAGFNEPFIQDISKMYPGRASASPSLDVLITLLSL---GCSGYRKLLKER 323 (450)
T ss_dssp HH-HHHHSCCCEEEEEHHHHHS-CCSSCEEEEESCHHHHHHHHHHSCSCBCSHHHHHHHHHHHHH---HHHHHHHHHHHH
T ss_pred HH-HhcccCCCEEEECCccCCC-chhccEEEEecCHHHHHHHHHHhhcCCcccHHHHHHHHHHHH---HHHHHHHHHHHH
Confidence 10 000 244567789999986 445567777678877766644221112334444444444322 233345555555
Q ss_pred HHHHHHHHHHHHhC----CCcccCCC-ceeEEeeecCCcCCCCChhhHHHHHHHHHHhcC---eEEcC-C-------CC-
Q 019899 236 KKLYDSFVAGLKQL----GIRCSESS-AGLYCWADMSGLIPSYSEKGELELWDKLLNIAK---INVTP-G-------SA- 298 (334)
Q Consensus 236 ~~~~~~~~~~l~~~----g~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g---i~v~~-g-------~~- 298 (334)
.++++++.+.|++. |.++...+ .+.-..+.++... .....|...+.-.+.. .| ..+.+ | ..
T Consensus 324 ~~~a~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~-~~~~~D~tkl~i~~~~-~g~sG~~v~~~~~~~~~~~~~l 401 (450)
T 3bc8_A 324 KEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTID-GHHDKAVTQLGSMLFT-RQVSGARAVPLGNVQTVSGHTF 401 (450)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTS-SSSSCHHHHHHHHHHH-TTCCSCEEECSCCEEEETTEEE
T ss_pred HHHHHHHHHHHHhhHHhcCceecCCccCCCcceeeccccc-ccccCCCceeEEEecC-CCCccceeeecccccchhHHHH
Confidence 66667777777553 66555332 1111112232211 1111244455554333 34 33331 1 11
Q ss_pred --cCC----CCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 299 --CHC----IEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 299 --~~~----~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
|+. ....++-+.++. .+++++++++++|+++.++
T Consensus 402 ~~~gi~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~~ 442 (450)
T 3bc8_A 402 RGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNI 442 (450)
T ss_dssp ETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHcCCeeecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 111 123566665553 6999999999999998654
No 234
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.76 E-value=6.3e-17 Score=146.82 Aligned_cols=296 Identities=17% Similarity=0.113 Sum_probs=183.5
Q ss_pred CCcEEEecCcHHHHHHHHHHh--cCCCCeEEecCCCCCChhhhhhhcc-------------CcEEEEEeCCCC----CCc
Q 019899 17 PSQIVLTAGATPAVEILCFCL--ADHGNALLVPSPYYPGFDRDIRFRT-------------GVELIPVHCRST----DNF 77 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~~~~l--~~~gd~vl~~~p~~~~~~~~~~~~~-------------g~~v~~v~~~~~----~~~ 77 (334)
.+.+++++++++|+..++... .....+|+....+|.+......-.. ...+..+|..+. ...
T Consensus 125 ~~~v~f~~sGsEA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~ 204 (456)
T 4atq_A 125 AKRTVLFNSGAEAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPE 204 (456)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTT
T ss_pred CcEEEEeCChHHHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCc
Confidence 457999999999999998764 2355688888888876543211011 123555554221 112
Q ss_pred cccHHHHHHHHHHHHH--cCCceeEEEEeCCCCCcccCC-CHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhh
Q 019899 78 AFSITALDQAFNQARK--RGVKVRGILICNPANPVGNII-PRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAE 154 (334)
Q Consensus 78 ~~~~~~l~~~l~~~~~--~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~ 154 (334)
..+.+.+++.++.... .+.++.+|++...+...|.+. +.+.++++.++|++||+++|+||++.++...|..+.. ..
T Consensus 205 ~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~-e~ 283 (456)
T 4atq_A 205 ITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAV-DH 283 (456)
T ss_dssp CCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGG-GG
T ss_pred ccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccc-cc
Confidence 2345555555544332 223566555554466778765 5668999999999999999999999987655543321 11
Q ss_pred hhhccccCCCcEEEEecccccCCCCCceEEEEeecCHHHHHHHHH--hhcccCCChHHHHHHHHhhCChHHHHHHHHHHH
Q 019899 155 ILEAEEVDKDRVHIIYGLSKDLSLPGFRTGVIYSYNESVLAAAKK--LTRFCSISAPTQRLLISMLSDTKFIQEYLETNK 232 (334)
Q Consensus 155 ~~~~~~~~~~~~~~~~s~sK~~~~~g~r~g~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 232 (334)
. +..+| +.+++|.+| .|+++|.+++ ++++.+.+.. +..+|+.|+.+..++.+.++..+ + +.+.
T Consensus 284 ~----gv~PD----ivt~gK~lg-gg~P~~av~~-~~~i~~~~~~~~~~~Tf~gnpla~aaala~L~~i~--~---~~l~ 348 (456)
T 4atq_A 284 E----GVVPD----IITMAKGIA-GGLPLSAITG-RADLLDAVHPGGLGGTYGGNPVACAAALAAIDTME--Q---HDLN 348 (456)
T ss_dssp T----TCCCS----EEEECGGGG-TTSSCEEEEE-EHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHH--H---TTHH
T ss_pred c----CCCCc----hhhhhhccc-CcCCceeeEe-cHHHHhcccccCCCCCCCCChHHHHhhHHHHHHHh--h---ccHH
Confidence 1 11122 346789998 8899999998 7888777653 34567789988888888775432 1 1223
Q ss_pred HHHHHHHHHHHHHHHhC----C---CcccC--CCceeEEeeecCCcCCC-CChhhHHHHHHHHHHhcCeEEcCCCCcCCC
Q 019899 233 RRIKKLYDSFVAGLKQL----G---IRCSE--SSAGLYCWADMSGLIPS-YSEKGELELWDKLLNIAKINVTPGSACHCI 302 (334)
Q Consensus 233 ~~~~~~~~~~~~~l~~~----g---~~~~~--~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~ 302 (334)
++.++.-+++.+.|+++ . ..++. ..-|+++.+++..+... ........+...+++ +|+.+.++..
T Consensus 349 ~~~~~~g~~l~~~L~~l~~~~~~~~~~~v~~VRG~Gl~~giel~~~~~~~~~~~~~~~v~~~~~~-~Gvl~~~~g~---- 423 (456)
T 4atq_A 349 GRARHIEELALGKLRELAAELSAGGGSVVGDIRGRGAMLAIELVQPGSKEPNAELTKAVAAACLK-EGVIILTCGT---- 423 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCC-----CEEEEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHH-TTEECEEECT----
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccCCceEEeeecceEEEEEEecCCCCCcCHHHHHHHHHHHHH-CCCEEEecCC----
Confidence 33444444444444432 1 11111 11255666776543221 122334456777555 8999876432
Q ss_pred CCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 303 EPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 303 ~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
..+.+|+...- ++++++++++++|.++++.+
T Consensus 424 ~~~~irl~PpL~it~~~id~~l~~l~~al~a~ 455 (456)
T 4atq_A 424 YGNVIRLLPPLVISDELLIDGLEVLAAAIKAH 455 (456)
T ss_dssp TSCEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHHhh
Confidence 24679998764 69999999999999999864
No 235
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.75 E-value=2.8e-16 Score=143.13 Aligned_cols=292 Identities=16% Similarity=0.172 Sum_probs=177.6
Q ss_pred CCCCCCCcEEEecCcHHHHHHHHHHhc--------CCCCeEEecCCCCCChhhh-hhhccC-----------cEEEEEeC
Q 019899 12 AVSFDPSQIVLTAGATPAVEILCFCLA--------DHGNALLVPSPYYPGFDRD-IRFRTG-----------VELIPVHC 71 (334)
Q Consensus 12 ~~~~~~~~i~~~~g~~~~~~~~~~~l~--------~~gd~vl~~~p~~~~~~~~-~~~~~g-----------~~v~~v~~ 71 (334)
..+.+.+.+++++++++|+..++.... ....+|+....+|.+.... +. ..| ..+..++.
T Consensus 123 ~~p~~~~~v~f~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s-~tg~~~~~~~~~~~~~~~~~~~ 201 (473)
T 4e3q_A 123 VSPFDSGRVFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSAS-MTGKPYNSVFGLPLPGFVHLTC 201 (473)
T ss_dssp HSSCSSCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHH-HSCCGGGGGGTCSCTTEEEECC
T ss_pred hCCCCccEEEEeCchHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCcccccc-ccccccccccCCCCCcccccCC
Confidence 344556799999999999999987642 1235788888888763322 21 111 12333333
Q ss_pred CCC----CCcc-------ccHHHHHHHHHHHHHcCCceeEEEEeCC-CCCcccCCC-HHHHHHHHHHHHhcCcEEEEecc
Q 019899 72 RST----DNFA-------FSITALDQAFNQARKRGVKVRGILICNP-ANPVGNIIP-RETLYELLDFAREKNIHVISDEI 138 (334)
Q Consensus 72 ~~~----~~~~-------~~~~~l~~~l~~~~~~~~~~~~i~~~~p-~nptG~~~~-~~~l~~i~~~~~~~~~~vi~D~~ 138 (334)
++. .... ...+++++.+.+. ...++. .++..| +...|++.+ .+.++++.++|++||+++|.||+
T Consensus 202 p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~~iA-avi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV 278 (473)
T 4e3q_A 202 PHYWRYGEEGETEEQFVARLARELEETIQRE--GADTIA-GFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEV 278 (473)
T ss_dssp CCHHHHSCTTCCHHHHHHHHHHHHHHHHHHH--CGGGEE-EEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECT
T ss_pred CcccccccccchhhHHHHHHHHHHHHHHHhh--CCCceE-EEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCc
Confidence 210 0000 1223444544432 112344 455555 777787654 56799999999999999999999
Q ss_pred ccccccCCCCcchhhhhhhccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHHh---------hcccCCCh
Q 019899 139 YGGSIFGNEEFVSMAEILEAEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKKL---------TRFCSISA 208 (334)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~~---------~~~~~~~~ 208 (334)
+.+|...|..+..- .. +..+| +.+++|.++ .| +++|.+++ ++++.+.+... ..+++.|+
T Consensus 279 ~tGfGRtG~~fa~e-~~----gv~PD----i~t~~K~l~-gG~~Pl~av~~-~~~i~~~~~~~~~~~~~~~hg~T~~Gnp 347 (473)
T 4e3q_A 279 ICGFGRTGNTWGCV-TY----DFTPD----AIISSKNLT-AGFFPMGAVIL-GPELSKRLETAIEAIEEFPHGFTASGHP 347 (473)
T ss_dssp TTSSSTTSSSCHHH-HT----TCCCS----EEEECGGGG-TTSSCCEEEEE-CHHHHHHHHHHHHHHSCCCCCCTTTTCH
T ss_pred cccCCcccchhHHH-hc----CCCCC----hHHhccccc-CCCCCcccccc-cHHHHHHhccccccccccccCCCCCCCc
Confidence 99876655543221 11 11122 335889998 66 89999998 88988887542 23467788
Q ss_pred HHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CCcccCCCceeEEeeecCCcCCCC-----ChhhHH
Q 019899 209 PTQRLLISMLSDTKFIQEYLETNKRRIKKLYDSFVAGLKQL----GIRCSESSAGLYCWADMSGLIPSY-----SEKGEL 279 (334)
Q Consensus 209 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----g~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~ 279 (334)
.+..++.+.++..+ + +...+++++.-+++.+.|+++ .+.-+.. -|+++.+++.+..... ......
T Consensus 348 la~Aaala~L~~i~--~---~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vRG-~Gl~~gielv~~~~~~~~~~~~~~~~~ 421 (473)
T 4e3q_A 348 VGCAIALKAIDVVM--N---EGLAENVRRLAPRFEERLKHIAERPNIGEYRG-IGFMWALEAVKDKASKTPFDGNLSVSE 421 (473)
T ss_dssp HHHHHHHHHHHHHH--H---SSHHHHHHHHHHHHHHHHHHHTTSTTEEEEEE-ETTEEEEEECSBTTTTBCCCGGGCHHH
T ss_pred chhhhhhhhhhhhc--c---ccHHHHHHHHHHHHHHHHHHHhcCCCeeEEee-cceEEEEEEecCccccccccccHHHHH
Confidence 88888777775432 1 223444555566666666654 1111111 2445556654332211 112234
Q ss_pred HHHHHHHHhcCeEEcCCCCcCCCCCCeEEEEecC-CCcccHHHHHHHHHHHHHH
Q 019899 280 ELWDKLLNIAKINVTPGSACHCIEPGWFRCCFTS-LTHEDIPLVIERIQKVAET 332 (334)
Q Consensus 280 ~~~~~ll~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~ 332 (334)
.+...++ ++|+.+.|.. +.+|++.+. +++++++++++++.+++++
T Consensus 422 ~~~~~~~-~~Gll~~~~g-------~~i~l~PPL~it~~eid~~~~~l~~al~~ 467 (473)
T 4e3q_A 422 RIANTCT-DLGLICRPLG-------QSVVLCPPFILTEAQMDEMFDKLEKALDK 467 (473)
T ss_dssp HHHHHHH-HTTEECEEET-------TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HCCcEEEecC-------CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 5666644 5899987632 468888664 6999999999999998876
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.71 E-value=3.7e-17 Score=158.38 Aligned_cols=232 Identities=14% Similarity=0.078 Sum_probs=139.0
Q ss_pred HHHHHHHHHHH--HcCCceeEEEEeCC-CCCcccCC-CHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhh
Q 019899 82 TALDQAFNQAR--KRGVKVRGILICNP-ANPVGNII-PRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILE 157 (334)
Q Consensus 82 ~~l~~~l~~~~--~~~~~~~~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~ 157 (334)
+.|++.|++.. .+..++.+|++... ++..|.+. |.+.+++|.++|++||+++|+||++.+|...|..+. ....
T Consensus 577 ~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa-~e~~-- 653 (831)
T 4a0g_A 577 AYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETT-TELL-- 653 (831)
T ss_dssp HHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSST-HHHH--
T ss_pred HHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchh-hHhc--
Confidence 45666665321 12235665655543 68888765 777899999999999999999999998766665442 1111
Q ss_pred ccccCCCcEEEEecccccCCCCC-ceEEEEeecCHHHHHHHHH--------hhcccCCChHHHHHHHHhhCChHH--HHH
Q 019899 158 AEEVDKDRVHIIYGLSKDLSLPG-FRTGVIYSYNESVLAAAKK--------LTRFCSISAPTQRLLISMLSDTKF--IQE 226 (334)
Q Consensus 158 ~~~~~~~~~~~~~s~sK~~~~~g-~r~g~i~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~--~~~ 226 (334)
+..++ +.+++|.++ .| +++|++++ ++++.+.+.. +...++.++..+.++.+.++..+. +.+
T Consensus 654 --gv~PD----iitlsK~L~-gG~~Plgav~~-~~~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l~~ 725 (831)
T 4a0g_A 654 --GCKPD----IACFAKLLT-GGMVPLAVTLA-TDAVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDPETNH 725 (831)
T ss_dssp --SSCCS----EEEECGGGG-TTSSCCEEEEE-CHHHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTTCT
T ss_pred --CCCCc----EEEEecccc-cCccCcEEEEE-CHHHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhhHHHH
Confidence 12122 237999998 67 79999999 8898888754 223456788888777776642110 001
Q ss_pred HHHHHHHHHHH-HHHHHHHHHHhCCC-cccCCCceeEEeeecCCcCC--CCChhhHHHHHHHHHHhcCeEEcCCCCcCCC
Q 019899 227 YLETNKRRIKK-LYDSFVAGLKQLGI-RCSESSAGLYCWADMSGLIP--SYSEKGELELWDKLLNIAKINVTPGSACHCI 302 (334)
Q Consensus 227 ~~~~~~~~~~~-~~~~~~~~l~~~g~-~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~ 302 (334)
...+..+++++ ..+.+.+.+.+.+. ..+.. .|.+..+++..... ........++...++ ++||.+.|+
T Consensus 726 ~~~~~~~~l~~~l~~~l~~~l~~~~~v~~vrg-~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~-e~Gv~v~p~------ 797 (831)
T 4a0g_A 726 NITSQGKTLRELWDEELVQQISSHSAVQRVVV-IGTLFALELKADASNSGYASLYAKSLLIMLR-EDGIFTRPL------ 797 (831)
T ss_dssp TBCTTSSBBCCCSCHHHHHHHHHSTTEEEEEE-ETTEEEEEEC---------CHHHHHHHHHHH-HTTEECCCB------
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCceeEee-cccEEEEEEecCccccccchHHHHHHHHHHH-HCCcEEEec------
Confidence 11111111111 01223444554432 22222 35556566643211 011123456777754 589999874
Q ss_pred CCCeEEEEecC-CCcccHHHHHHHHHHHHHHc
Q 019899 303 EPGWFRCCFTS-LTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 303 ~~~~iRi~~~~-~~~~~l~~~l~~l~~~~~~~ 333 (334)
.+.+|++... ++++++++++++|.+++++.
T Consensus 798 -g~~lrl~pp~~~t~e~id~~~~~l~~~l~~l 828 (831)
T 4a0g_A 798 -GNVIYLMCGPCTSPEICRRLLTKLYKRLGEF 828 (831)
T ss_dssp -TTEEEEECCTTCCHHHHHHHHHHHHHHHTTT
T ss_pred -CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 2589999664 69999999999999998764
No 237
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=86.79 E-value=3.8 Score=30.19 Aligned_cols=120 Identities=15% Similarity=0.183 Sum_probs=72.9
Q ss_pred hhhhhhhcCCCCCCCCcEEEecCc--HHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCcccc
Q 019899 3 GFMSQVLGQAVSFDPSQIVLTAGA--TPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 3 ~~~~~~~~~~~~~~~~~i~~~~g~--~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
.|++..++.+..++...++++-+- ...+.-+...+.+-|-+++.+..+ ...++ ..|.++..|.-..+++..-+
T Consensus 10 A~~Ka~~aag~~lP~~gvliSv~d~dK~~l~~~a~~l~~lGf~i~AT~GT----a~~L~-~~Gi~v~~v~k~~egg~~~~ 84 (143)
T 2yvq_A 10 AFLKAMLSTGFKIPQKGILIGIQQSFRPRFLGVAEQLHNEGFKLFATEAT----SDWLN-ANNVPATPVAWPSQEGQNPS 84 (143)
T ss_dssp HHHHHHTSCSCCCCCSEEEEECCGGGHHHHHHHHHHHHTTTCEEEEEHHH----HHHHH-HTTCCCEEECCGGGC-----
T ss_pred HHHHHHHhcCCCCCCCCEEEEecccchHHHHHHHHHHHHCCCEEEECchH----HHHHH-HcCCeEEEEEeccCCCcccc
Confidence 456666665566655557776665 555555666776778777776643 44555 67888887763222211001
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEe
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISD 136 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D 136 (334)
...+.+.|++ +++.+ ++..|. +...+..+-..|...|-+|+++++..
T Consensus 85 ~~~i~d~i~~-----g~i~l-VInt~~---~~~~~~~d~~~iRR~Av~~~IP~~T~ 131 (143)
T 2yvq_A 85 LSSIRKLIRD-----GSIDL-VINLPN---NNTKFVHDNYVIRRTAVDSGIPLLTN 131 (143)
T ss_dssp CBCHHHHHHT-----TSCCE-EEECCC---CCGGGHHHHHHHHHHHHHTTCCEECS
T ss_pred cccHHHHHHC-----CCceE-EEECCC---CCCcCCccHHHHHHHHHHhCCCeEcC
Confidence 1246677776 37774 444443 21233667889999999999999844
No 238
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=86.46 E-value=2.5 Score=35.04 Aligned_cols=102 Identities=14% Similarity=0.275 Sum_probs=60.9
Q ss_pred CcEEEecCcHHHHHHH-HHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCC
Q 019899 18 SQIVLTAGATPAVEIL-CFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGV 96 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~-~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~ 96 (334)
+.+++.+|++.++=.. ...|.+.|-+|++..-.-.......+ ..|.+...+.++ --|.+++++.++....+-+
T Consensus 29 gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~-~~g~~~~~~~~D-----v~~~~~v~~~~~~~~~~~G 102 (273)
T 4fgs_A 29 AKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIA-EIGGGAVGIQAD-----SANLAELDRLYEKVKAEAG 102 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHCTTCEEEECC-----TTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-HcCCCeEEEEec-----CCCHHHHHHHHHHHHHHcC
Confidence 4577777777788444 55567888888776543333333444 445555566542 2356777777766655545
Q ss_pred ceeEEEEeCC-CCCccc--CCCHHHHHHHHHHH
Q 019899 97 KVRGILICNP-ANPVGN--IIPRETLYELLDFA 126 (334)
Q Consensus 97 ~~~~i~~~~p-~nptG~--~~~~~~l~~i~~~~ 126 (334)
++. ++++|. .++.+- -++.++++++.++-
T Consensus 103 ~iD-iLVNNAG~~~~~~~~~~~~e~w~~~~~vN 134 (273)
T 4fgs_A 103 RID-VLFVNAGGGSMLPLGEVTEEQYDDTFDRN 134 (273)
T ss_dssp CEE-EEEECCCCCCCCCTTSCCHHHHHHHHHHH
T ss_pred CCC-EEEECCCCCCCCChhhccHHHHHHHHHHH
Confidence 788 555554 333333 34677888887743
No 239
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=82.31 E-value=7.1 Score=31.87 Aligned_cols=101 Identities=13% Similarity=0.166 Sum_probs=60.8
Q ss_pred CcEEEecCcHHHHHHH-HHHhcCCCCeEEecCCCCCChhhh---hhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 18 SQIVLTAGATPAVEIL-CFCLADHGNALLVPSPYYPGFDRD---IRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~-~~~l~~~gd~vl~~~p~~~~~~~~---~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
+.+++.+|++.++=.. ...|.+.|-+|++..-.-...... ++ ..|.++..+.++ --|.+++++.++....
T Consensus 7 gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~-~~g~~~~~~~~D-----vt~~~~v~~~~~~~~~ 80 (254)
T 4fn4_A 7 NKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELR-GMGKEVLGVKAD-----VSKKKDVEEFVRRTFE 80 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH-HTTCCEEEEECC-----TTSHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHH-hcCCcEEEEEcc-----CCCHHHHHHHHHHHHH
Confidence 4577777777788544 445567888887765432222222 22 356677777653 2356777777776655
Q ss_pred cCCceeEEEEeCC--CCCccc--CCCHHHHHHHHHH
Q 019899 94 RGVKVRGILICNP--ANPVGN--IIPRETLYELLDF 125 (334)
Q Consensus 94 ~~~~~~~i~~~~p--~nptG~--~~~~~~l~~i~~~ 125 (334)
+-+++. ++++|. ..+.+. -++.++++++.++
T Consensus 81 ~~G~iD-iLVNNAGi~~~~~~~~~~~~e~~~~~~~v 115 (254)
T 4fn4_A 81 TYSRID-VLCNNAGIMDGVTPVAEVSDELWERVLAV 115 (254)
T ss_dssp HHSCCC-EEEECCCCCCTTCCGGGCCHHHHHHHHHH
T ss_pred HcCCCC-EEEECCcccCCCCChhhCCHHHHHHHHHH
Confidence 545788 556655 223332 3577888888774
No 240
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=82.18 E-value=5.7 Score=36.22 Aligned_cols=25 Identities=28% Similarity=0.538 Sum_probs=23.0
Q ss_pred cccCCCHHHHHHHHHHHHhcCcEEE
Q 019899 110 VGNIIPRETLYELLDFAREKNIHVI 134 (334)
Q Consensus 110 tG~~~~~~~l~~i~~~~~~~~~~vi 134 (334)
.|-.++.+|+++|.+.|+++||-||
T Consensus 249 ~~g~YT~~di~eIv~YA~~rgI~VI 273 (525)
T 3gh5_A 249 PGGYYTQEQFKDIVSYAAERYIEVI 273 (525)
T ss_dssp CCCCBCHHHHHHHHHHHHTTTCEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCEEE
Confidence 3567999999999999999999999
No 241
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=82.16 E-value=11 Score=30.80 Aligned_cols=101 Identities=19% Similarity=0.234 Sum_probs=62.3
Q ss_pred CcEEEecCcHHHHHHH-HHHhcCCCCeEEecCCCCCChhhh---hhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 18 SQIVLTAGATPAVEIL-CFCLADHGNALLVPSPYYPGFDRD---IRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~-~~~l~~~gd~vl~~~p~~~~~~~~---~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
+.+++.+|++.++=.. ...|.+.|-+|++..-.-....+. +. ..|.++..+.++ --|.+++++.++....
T Consensus 9 gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~-~~g~~~~~~~~D-----v~~~~~v~~~~~~~~~ 82 (255)
T 4g81_D 9 GKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLT-RKGYDAHGVAFD-----VTDELAIEAAFSKLDA 82 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHH-HTTCCEEECCCC-----TTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH-hcCCcEEEEEee-----CCCHHHHHHHHHHHHH
Confidence 4677777777787444 555678888888765432222222 22 346667666652 2367888888888777
Q ss_pred cCCceeEEEEeCC-CCCccc--CCCHHHHHHHHHH
Q 019899 94 RGVKVRGILICNP-ANPVGN--IIPRETLYELLDF 125 (334)
Q Consensus 94 ~~~~~~~i~~~~p-~nptG~--~~~~~~l~~i~~~ 125 (334)
+.+++. ++++|. .++.+- -++.++++++.++
T Consensus 83 ~~G~iD-iLVNNAG~~~~~~~~~~~~e~~~~~~~v 116 (255)
T 4g81_D 83 EGIHVD-ILINNAGIQYRKPMVELELENWQKVIDT 116 (255)
T ss_dssp TTCCCC-EEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HCCCCc-EEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 767888 555554 333333 3467778777764
No 242
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=82.10 E-value=8.5 Score=31.15 Aligned_cols=101 Identities=15% Similarity=0.173 Sum_probs=49.6
Q ss_pred CcEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCC
Q 019899 18 SQIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGV 96 (334)
Q Consensus 18 ~~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~ 96 (334)
+.+++.+|++.++- .+...|.+.|.+|++..-.-........ ..+.++..+..+ --|.++++++++......+
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~~g 80 (257)
T 3tpc_A 7 SRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAA-ELGAAVRFRNAD-----VTNEADATAALAFAKQEFG 80 (257)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-------------CEEEECC-----TTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH-HhCCceEEEEcc-----CCCHHHHHHHHHHHHHHcC
Confidence 34566666666664 4455566788787776544333333333 334445555442 2356777777766554444
Q ss_pred ceeEEEEeCCCCCccc------CCCHHHHHHHHH
Q 019899 97 KVRGILICNPANPVGN------IIPRETLYELLD 124 (334)
Q Consensus 97 ~~~~i~~~~p~nptG~------~~~~~~l~~i~~ 124 (334)
++..++.+....+.+. ..+.+++++..+
T Consensus 81 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~ 114 (257)
T 3tpc_A 81 HVHGLVNCAGTAPGEKILGRSGPHALDSFARTVA 114 (257)
T ss_dssp CCCEEEECCCCCCCCCSEETTEECCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCccccccccCCHHHHHHHHH
Confidence 7775554433332222 245566666655
No 243
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=81.60 E-value=5.7 Score=36.16 Aligned_cols=27 Identities=30% Similarity=0.625 Sum_probs=23.7
Q ss_pred CcccCCCHHHHHHHHHHHHhcCcEEEE
Q 019899 109 PVGNIIPRETLYELLDFAREKNIHVIS 135 (334)
Q Consensus 109 ptG~~~~~~~l~~i~~~~~~~~~~vi~ 135 (334)
|.+..++.+|+++|.+.|+++||-||-
T Consensus 207 ~~~~~YT~~di~eiv~yA~~rgI~VIP 233 (507)
T 2gjx_A 207 PVTHIYTAQDVKEVIEYARLRGIRVLA 233 (507)
T ss_dssp TTTSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 335679999999999999999999993
No 244
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=80.97 E-value=5.9 Score=31.96 Aligned_cols=101 Identities=12% Similarity=0.142 Sum_probs=55.8
Q ss_pred CcEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCC
Q 019899 18 SQIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGV 96 (334)
Q Consensus 18 ~~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~ 96 (334)
+.+++.+|++.++- .+...|.+.|.+|++..-.-........ ..+.++..+.++ --|.++++++++......+
T Consensus 6 gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~~g 79 (247)
T 3rwb_A 6 GKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAA-SIGKKARAIAAD-----ISDPGSVKALFAEIQALTG 79 (247)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-HHCTTEEECCCC-----TTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HhCCceEEEEcC-----CCCHHHHHHHHHHHHHHCC
Confidence 34566666666664 4455566788888876544333333333 335555555542 2356777777766554444
Q ss_pred ceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 97 KVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 97 ~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
++..++.+....+.+. -.+.++++++.+
T Consensus 80 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 109 (247)
T 3rwb_A 80 GIDILVNNASIVPFVAWDDVDLDHWRKIID 109 (247)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 6785554444333332 346666666665
No 245
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=80.15 E-value=4.3 Score=27.70 Aligned_cols=59 Identities=14% Similarity=0.162 Sum_probs=41.1
Q ss_pred ccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHH-HHHHHHHHHHhcCcEEE-Eecccc
Q 019899 77 FAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRE-TLYELLDFAREKNIHVI-SDEIYG 140 (334)
Q Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~-~l~~i~~~~~~~~~~vi-~D~~~~ 140 (334)
...+++.|.+.++++ ++..+++-.|-|..|..-+.. ..++.++..++.++.|. +||-++
T Consensus 36 ~~~~~~~l~~li~e~-----~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~lpV~~~DERlT 96 (98)
T 1iv0_A 36 LEEDVEALLDFVRRE-----GLGKLVVGLPLRTDLKESAQAGKVLPLVEALRARGVEVELWDERFT 96 (98)
T ss_dssp HHHHHHHHHHHHHHH-----TCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHTTCEEEEECCSCC
T ss_pred cHHHHHHHHHHHHHc-----CCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 345788999999987 888899999988777755432 24555554433366665 888764
No 246
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=76.65 E-value=14 Score=30.01 Aligned_cols=99 Identities=13% Similarity=0.141 Sum_probs=55.3
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
..++.+|++.++= .+...|.+.|-+|++..-.-....+..+ .+.++..+..+ --|.+++++.++....+-++
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~--~~~~~~~~~~D-----v~~~~~v~~~v~~~~~~~g~ 75 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK--ERPNLFYFHGD-----VADPLTLKKFVEYAMEKLQR 75 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT--TCTTEEEEECC-----TTSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--hcCCEEEEEec-----CCCHHHHHHHHHHHHHHcCC
Confidence 3456666666774 4455567788888776543222222222 23345555542 23567777777666555457
Q ss_pred eeEEEEeCC-CCCccc--CCCHHHHHHHHHH
Q 019899 98 VRGILICNP-ANPVGN--IIPRETLYELLDF 125 (334)
Q Consensus 98 ~~~i~~~~p-~nptG~--~~~~~~l~~i~~~ 125 (334)
+. +++.|. .++.+. -++.++++++.++
T Consensus 76 iD-iLVNNAG~~~~~~~~~~~~e~~~~~~~v 105 (247)
T 3ged_A 76 ID-VLVNNACRGSKGILSSLLYEEFDYILSV 105 (247)
T ss_dssp CC-EEEECCCCCCCCGGGTCCHHHHHHHHHH
T ss_pred CC-EEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 88 555554 343333 3467778777764
No 247
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=75.99 E-value=11 Score=34.14 Aligned_cols=24 Identities=17% Similarity=0.455 Sum_probs=22.5
Q ss_pred ccCCCHHHHHHHHHHHHhcCcEEE
Q 019899 111 GNIIPRETLYELLDFAREKNIHVI 134 (334)
Q Consensus 111 G~~~~~~~l~~i~~~~~~~~~~vi 134 (334)
|..++.+|+++|.+.|+++||-||
T Consensus 214 ~~~YT~~di~eiv~yA~~rgI~VI 237 (507)
T 1now_A 214 SHVYTPNDVRMVIEYARLRGIRVL 237 (507)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEE
Confidence 567899999999999999999999
No 248
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=75.97 E-value=19 Score=29.26 Aligned_cols=98 Identities=11% Similarity=0.128 Sum_probs=52.1
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
.+++.+|++.++- .+...|.+.|.+|++..-.-......+. ..+...+..++ -|.++++++++......++
T Consensus 28 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~Dv-------~~~~~v~~~~~~~~~~~g~ 99 (260)
T 3gem_A 28 APILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELR-QAGAVALYGDF-------SCETGIMAFIDLLKTQTSS 99 (260)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHH-HHTCEEEECCT-------TSHHHHHHHHHHHHHHCSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH-hcCCeEEECCC-------CCHHHHHHHHHHHHHhcCC
Confidence 3455556666664 4445566778777766543333333344 34555554444 2567777777766555557
Q ss_pred eeEEEEeCCCC-CcccCCCHHHHHHHHH
Q 019899 98 VRGILICNPAN-PVGNIIPRETLYELLD 124 (334)
Q Consensus 98 ~~~i~~~~p~n-ptG~~~~~~~l~~i~~ 124 (334)
+..++.+.... +.....+.+++++..+
T Consensus 100 iD~lv~nAg~~~~~~~~~~~~~~~~~~~ 127 (260)
T 3gem_A 100 LRAVVHNASEWLAETPGEEADNFTRMFS 127 (260)
T ss_dssp CSEEEECCCCCCCCCTTCHHHHHHHHHH
T ss_pred CCEEEECCCccCCCCCCCCHHHHHHHHH
Confidence 78555444322 2222334444555444
No 249
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=75.78 E-value=13 Score=30.36 Aligned_cols=100 Identities=12% Similarity=0.100 Sum_probs=54.2
Q ss_pred cEEEecCcHHHHHH-HHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 19 QIVLTAGATPAVEI-LCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 19 ~i~~~~g~~~~~~~-~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
.+++.+|++.++-. +...|.+.|.+|++..-.-........ ..+..+..+.++ --|.+.+++++++.....++
T Consensus 6 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D-----v~~~~~~~~~~~~~~~~~g~ 79 (281)
T 3m1a_A 6 KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVA-AYPDRAEAISLD-----VTDGERIDVVAADVLARYGR 79 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHH-HCTTTEEEEECC-----TTCHHHHHHHHHHHHHHHSC
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-hccCCceEEEee-----CCCHHHHHHHHHHHHHhCCC
Confidence 46666777667643 445566788888776544333434333 334344444432 13566777777665444446
Q ss_pred eeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 98 VRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 98 ~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
+..++.+....+.+. -.+.+++++..+
T Consensus 80 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 108 (281)
T 3m1a_A 80 VDVLVNNAGRTQVGAFEETTERELRDLFE 108 (281)
T ss_dssp CSEEEECCCCEEECCTTTCCHHHHHHHHH
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 775555444332222 345566665554
No 250
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=75.77 E-value=15 Score=30.05 Aligned_cols=101 Identities=14% Similarity=0.111 Sum_probs=55.7
Q ss_pred CcEEEecCcHHHHHHH-HHHhcCCCCeEEecCCCCCC--hhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 18 SQIVLTAGATPAVEIL-CFCLADHGNALLVPSPYYPG--FDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~-~~~l~~~gd~vl~~~p~~~~--~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
+.+++.+|++.++=.. ...|.+.|-+|++..-.-.. ....+. ..|.+...+.++ --|.+++++.++...++
T Consensus 7 gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~-~~~~~~~~~~~D-----v~~~~~v~~~v~~~~~~ 80 (258)
T 4gkb_A 7 DKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALA-QRQPRATYLPVE-----LQDDAQCRDAVAQTIAT 80 (258)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHH-HHCTTCEEEECC-----TTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHH-hcCCCEEEEEee-----cCCHHHHHHHHHHHHHH
Confidence 4677777877788444 45566777766665432222 112222 234455555542 12556666666665554
Q ss_pred CCceeEEEEeCC--CCCcccCCCHHHHHHHHHH
Q 019899 95 GVKVRGILICNP--ANPVGNIIPRETLYELLDF 125 (334)
Q Consensus 95 ~~~~~~i~~~~p--~nptG~~~~~~~l~~i~~~ 125 (334)
-+++. ++++|. ..+...-.+.++++++.++
T Consensus 81 ~G~iD-iLVNnAGi~~~~~~~~~~e~~~~~~~v 112 (258)
T 4gkb_A 81 FGRLD-GLVNNAGVNDGIGLDAGRDAFVASLER 112 (258)
T ss_dssp HSCCC-EEEECCCCCCCCCTTSCHHHHHHHHHH
T ss_pred hCCCC-EEEECCCCCCCCCccCCHHHHHHHHHH
Confidence 45788 555555 2233344566777776653
No 251
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=73.76 E-value=11 Score=31.12 Aligned_cols=100 Identities=11% Similarity=0.084 Sum_probs=53.6
Q ss_pred cEEEecCcHHHHHH-HHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 19 QIVLTAGATPAVEI-LCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 19 ~i~~~~g~~~~~~~-~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
.+++.+|++.++-. +...|.+.|.+|++..-.-........ ..+.++..+.++ --|.+.++++++......++
T Consensus 30 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~ 103 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAAT-KIGCGAAACRVD-----VSDEQQIIAMVDACVAAFGG 103 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HHCSSCEEEECC-----TTCHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HcCCcceEEEec-----CCCHHHHHHHHHHHHHHcCC
Confidence 46667777667644 445566788888776533222333333 334444444432 13566777776655444447
Q ss_pred eeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 98 VRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 98 ~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
+..++.+....+.+. -.+.++++++.+
T Consensus 104 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 132 (277)
T 3gvc_A 104 VDKLVANAGVVHLASLIDTTVEDFDRVIA 132 (277)
T ss_dssp CCEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 785554443333332 346666666655
No 252
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=73.54 E-value=12 Score=34.00 Aligned_cols=25 Identities=16% Similarity=0.470 Sum_probs=23.1
Q ss_pred ccCCCHHHHHHHHHHHHhcCcEEEE
Q 019899 111 GNIIPRETLYELLDFAREKNIHVIS 135 (334)
Q Consensus 111 G~~~~~~~l~~i~~~~~~~~~~vi~ 135 (334)
|-.++.+|+++|.+.|+++||.||-
T Consensus 225 ~g~YT~~di~eiv~yA~~rgI~VIP 249 (512)
T 1jak_A 225 GGYYTKAEYKEIVRYAASRHLEVVP 249 (512)
T ss_dssp CCCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 5689999999999999999999993
No 253
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=73.01 E-value=6.5 Score=35.09 Aligned_cols=26 Identities=8% Similarity=0.305 Sum_probs=23.9
Q ss_pred CHHHHHHHHHHHHhcCcEEEEecccc
Q 019899 115 PRETLYELLDFAREKNIHVISDEIYG 140 (334)
Q Consensus 115 ~~~~l~~i~~~~~~~~~~vi~D~~~~ 140 (334)
+.++++++++.|+++|+.||.|-++-
T Consensus 63 t~~dfk~Lv~~aH~~Gi~VilD~V~N 88 (448)
T 1g94_A 63 NRAQFIDMVNRCSAAGVDIYVDTLIN 88 (448)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEECS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeec
Confidence 57899999999999999999999864
No 254
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=72.84 E-value=22 Score=28.96 Aligned_cols=101 Identities=7% Similarity=0.002 Sum_probs=54.7
Q ss_pred CcEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCC
Q 019899 18 SQIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGV 96 (334)
Q Consensus 18 ~~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~ 96 (334)
+.+++.+|++.++- .+...|.+.|.+|++..-.-........ ..+.++..+.++ --|.+.++++++......+
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~~g 84 (271)
T 3tzq_B 11 NKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAA-SVGRGAVHHVVD-----LTNEVSVRALIDFTIDTFG 84 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHH-HHCTTCEEEECC-----TTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-HhCCCeEEEECC-----CCCHHHHHHHHHHHHHHcC
Confidence 34666666666664 4455666788888776555444444444 334444444432 1356677777665544434
Q ss_pred ceeEEEEeCCCC-C-ccc--CCCHHHHHHHHH
Q 019899 97 KVRGILICNPAN-P-VGN--IIPRETLYELLD 124 (334)
Q Consensus 97 ~~~~i~~~~p~n-p-tG~--~~~~~~l~~i~~ 124 (334)
++..++.+.... + .+. -.+.+++++..+
T Consensus 85 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 116 (271)
T 3tzq_B 85 RLDIVDNNAAHSDPADMLVTQMTVDVWDDTFT 116 (271)
T ss_dssp CCCEEEECCCCCCTTCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCCccccCCHHHHHHHHH
Confidence 677555443332 2 111 346666666555
No 255
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=72.84 E-value=9.4 Score=31.41 Aligned_cols=101 Identities=15% Similarity=0.197 Sum_probs=53.7
Q ss_pred CcEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCC---------hh------hhhhhccCcEEEEEeCCCCCCccccH
Q 019899 18 SQIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPG---------FD------RDIRFRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 18 ~~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~---------~~------~~~~~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
+.+++.+|++.++- .+...|.+.|.+|++..-.... .. ..+. ..|.++..+.++ --|.
T Consensus 10 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D-----~~~~ 83 (287)
T 3pxx_A 10 DKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE-KTGRKAYTAEVD-----VRDR 83 (287)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHH-HTTSCEEEEECC-----TTCH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHH-hcCCceEEEEcc-----CCCH
Confidence 34566666666664 4455566788777765322110 10 1112 235556665542 2356
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHH
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLD 124 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~ 124 (334)
+++++++++.....+++..++.+....+.+...+.+++++..+
T Consensus 84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~ 126 (287)
T 3pxx_A 84 AAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFD 126 (287)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhh
Confidence 7777777665544447775554444444344466666766655
No 256
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=72.66 E-value=19 Score=28.86 Aligned_cols=98 Identities=14% Similarity=0.139 Sum_probs=49.8
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
..++.+|++.++- .+...|.+.|.+|++..-.-........ ..|..++..++ -|.++++++++......++
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~-------~~~~~~~~~~~~~~~~~g~ 77 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAE-AVGAHPVVMDV-------ADPASVERGFAEALAHLGR 77 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TTTCEEEECCT-------TCHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HcCCEEEEecC-------CCHHHHHHHHHHHHHHcCC
Confidence 3455556666663 4445566788887765432222222222 33544444443 2566777766655443346
Q ss_pred eeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 98 VRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 98 ~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
+..++.+....+.+. -.+.+++++..+
T Consensus 78 id~lvn~Ag~~~~~~~~~~~~~~~~~~~~ 106 (245)
T 1uls_A 78 LDGVVHYAGITRDNFHWKMPLEDWELVLR 106 (245)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 775554433322222 245566666555
No 257
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=71.30 E-value=29 Score=27.78 Aligned_cols=100 Identities=12% Similarity=0.139 Sum_probs=51.2
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCC-CChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCC
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYY-PGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGV 96 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~-~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~ 96 (334)
.+++.+|++.++- .+...|.+.|.+|++..-.- ......++ ..|.++..+.++ --|.++++++++.....-+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~~g 81 (249)
T 2ew8_A 8 KLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIR-NLGRRVLTVKCD-----VSQPGDVEAFGKQVISTFG 81 (249)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH-HTTCCEEEEECC-----TTCHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHH-hcCCcEEEEEee-----cCCHHHHHHHHHHHHHHcC
Confidence 4555566666664 44555667787777654322 11222233 345455555542 1255667776665544334
Q ss_pred ceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 97 KVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 97 ~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
++..++.+....+.+. -.+.++++++.+
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (249)
T 2ew8_A 82 RCDILVNNAGIYPLIPFDELTFEQWKKTFE 111 (249)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 6775554443333222 245566666555
No 258
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=70.95 E-value=7.6 Score=28.81 Aligned_cols=59 Identities=19% Similarity=0.281 Sum_probs=40.5
Q ss_pred ccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHH-HHHHHHH-HHHhcCcEEE-Eecccc
Q 019899 77 FAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRE-TLYELLD-FAREKNIHVI-SDEIYG 140 (334)
Q Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~-~l~~i~~-~~~~~~~~vi-~D~~~~ 140 (334)
...+.+.|.+.++++ ++..+++-.|-|..|..-..- ..+.++. ++.+.+++|+ +||.|+
T Consensus 40 ~~~~~~~l~~li~~~-----~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~T 101 (150)
T 1vhx_A 40 GDYGLSRLSELIKDY-----TIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLT 101 (150)
T ss_dssp TBCCHHHHHHHHTTS-----EEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSC
T ss_pred hHHHHHHHHHHHHHc-----CCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCC
Confidence 456789999999886 899999999977666653322 2345553 3444577655 799875
No 259
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=70.87 E-value=21 Score=29.14 Aligned_cols=99 Identities=10% Similarity=0.001 Sum_probs=52.7
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
.+++.+|++.++- .+...|.+.|.+|++..-.-........ ..+.++..+.++ --|.+.++++++.. .+-++
T Consensus 31 k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~-~~~~~~~~~~~D-----l~~~~~v~~~~~~~-~~~~~ 103 (281)
T 3ppi_A 31 ASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALAD-ELGNRAEFVSTN-----VTSEDSVLAAIEAA-NQLGR 103 (281)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHCTTEEEEECC-----TTCHHHHHHHHHHH-TTSSE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH-HhCCceEEEEcC-----CCCHHHHHHHHHHH-HHhCC
Confidence 4556666666664 4455566788888776543222333333 334455555542 23567777777765 33346
Q ss_pred eeEEEEeCC-CCCccc-------CCCHHHHHHHHH
Q 019899 98 VRGILICNP-ANPVGN-------IIPRETLYELLD 124 (334)
Q Consensus 98 ~~~i~~~~p-~nptG~-------~~~~~~l~~i~~ 124 (334)
+..++.++. ..+.+. ..+.+++++..+
T Consensus 104 id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (281)
T 3ppi_A 104 LRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTID 138 (281)
T ss_dssp EEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHH
T ss_pred CCeEEEccCcccccccccccccccCCHHHHHHHHH
Confidence 675555523 222222 355555665554
No 260
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=70.62 E-value=23 Score=28.80 Aligned_cols=102 Identities=10% Similarity=0.089 Sum_probs=54.8
Q ss_pred CcEEEecCcHHHHHH-HHHHhcCCCCeEEecCCCCCChhhhhhh--ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 18 SQIVLTAGATPAVEI-LCFCLADHGNALLVPSPYYPGFDRDIRF--RTGVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~-~~~~l~~~gd~vl~~~p~~~~~~~~~~~--~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
+.+++.+|++.++-. +...|.+.|.+|++..-.-......... ..|.++..+.++ --|.++++++++.....
T Consensus 4 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~~ 78 (264)
T 3tfo_A 4 DKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLD-----VTDRHSVAAFAQAAVDT 78 (264)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECC-----TTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcC-----CCCHHHHHHHHHHHHHH
Confidence 346677777777744 4455667888877764332222222210 235566666542 23566777776655444
Q ss_pred CCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 95 GVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 95 ~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
.+++..++.+....+.+. -.+.++++++.+
T Consensus 79 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~ 110 (264)
T 3tfo_A 79 WGRIDVLVNNAGVMPLSPLAAVKVDEWERMID 110 (264)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 446785554443333332 346666666665
No 261
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=70.08 E-value=32 Score=27.69 Aligned_cols=100 Identities=11% Similarity=0.110 Sum_probs=54.5
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
..++.+|++.++- .+...|.+.|.+|++..-.-........ ..+.++..+.++ --|.+++++++++...+.++
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~ 82 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAA-EIGPAAYAVQMD-----VTRQDSIDAAIAATVEHAGG 82 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHCTTEEEEECC-----TTCHHHHHHHHHHHHHHSSS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HhCCCceEEEee-----CCCHHHHHHHHHHHHHHcCC
Confidence 4555556666663 4455666788888776543322333333 334344455432 23567777777766555557
Q ss_pred eeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 98 VRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 98 ~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
+..++.+....+.+. -.+.+++++..+
T Consensus 83 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (259)
T 4e6p_A 83 LDILVNNAALFDLAPIVEITRESYEKLFA 111 (259)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 885555444333222 345666666555
No 262
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=69.61 E-value=28 Score=28.38 Aligned_cols=102 Identities=14% Similarity=0.160 Sum_probs=56.8
Q ss_pred CcEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhh--ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 18 SQIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRF--RTGVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 18 ~~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~--~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
+.+++.+|++.++- .+...|.+.|.+|++..-.-.......+. ..|.++..+.++ --|.++++++++.....
T Consensus 26 gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~~ 100 (271)
T 4ibo_A 26 GRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFD-----VTSESEIIEAFARLDEQ 100 (271)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCC-----TTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcC-----CCCHHHHHHHHHHHHHH
Confidence 35666777776774 44555667888888765432222222220 235556555542 23667788877776665
Q ss_pred CCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 95 GVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 95 ~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
.+++..++.+....+.+. -.+.+++++..+
T Consensus 101 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 132 (271)
T 4ibo_A 101 GIDVDILVNNAGIQFRKPMIELETADWQRVID 132 (271)
T ss_dssp TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCCEEEECCCCCCCCCchhCCHHHHHHHHH
Confidence 567885554443332222 346666666655
No 263
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=69.59 E-value=23 Score=28.36 Aligned_cols=99 Identities=10% Similarity=0.051 Sum_probs=50.1
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
.+++.+|++.++- .+...|.+.|.+|++..-.-...........+...+..++ -|.++++++++....+.++
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv-------~~~~~v~~~~~~~~~~~g~ 75 (247)
T 3dii_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDV-------ADPLTLKKFVEYAMEKLQR 75 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCT-------TSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeEEeeC-------CCHHHHHHHHHHHHHHcCC
Confidence 3455666666664 4455566788888776433222222222112233333333 3567777777665444447
Q ss_pred eeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 98 VRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 98 ~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
+..++.+....+.+. -.+.++++++.+
T Consensus 76 id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 104 (247)
T 3dii_A 76 IDVLVNNACRGSKGILSSLLYEEFDYILS 104 (247)
T ss_dssp CCEEEECCC-CCCCGGGTCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 775554443333232 345566666655
No 264
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=69.51 E-value=29 Score=28.39 Aligned_cols=100 Identities=15% Similarity=0.181 Sum_probs=54.6
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
.+++.+|++.++- .+...|.+.|.+|++..-.-........ ..+.++..+.++ --|.++++++++......++
T Consensus 28 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~ 101 (277)
T 4dqx_A 28 RVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVAN-EIGSKAFGVRVD-----VSSAKDAESMVEKTTAKWGR 101 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HHCTTEEEEECC-----TTCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HhCCceEEEEec-----CCCHHHHHHHHHHHHHHcCC
Confidence 4666666666764 4455566788888776543222333333 334455555542 23567777777665444446
Q ss_pred eeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 98 VRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 98 ~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
+..++.+....+.+. -.+.++++++.+
T Consensus 102 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 130 (277)
T 4dqx_A 102 VDVLVNNAGFGTTGNVVTIPEETWDRIMS 130 (277)
T ss_dssp CCEEEECCCCCCCBCTTTSCHHHHHHHHH
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 775554444333333 346666666655
No 265
>2epl_X N-acetyl-beta-D-glucosaminidase; glycoside hydrolase, family 20, GCNA, hydro; 1.40A {Streptococcus gordonii} PDB: 2epk_X 2epm_X 2epn_A* 2epo_A
Probab=69.35 E-value=25 Score=32.90 Aligned_cols=106 Identities=8% Similarity=0.064 Sum_probs=61.9
Q ss_pred CCCCcEEEecCcHHHHHHHHHHhc----CCC-CeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCc-cccHHHHHHHH
Q 019899 15 FDPSQIVLTAGATPAVEILCFCLA----DHG-NALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNF-AFSITALDQAF 88 (334)
Q Consensus 15 ~~~~~i~~~~g~~~~~~~~~~~l~----~~g-d~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~-~~~~~~l~~~l 88 (334)
++++.|.++.++..++.-.+++|. ..+ ...+.+.|.|+ +... -+++ ... -++++.+++.|
T Consensus 43 i~~~~i~I~a~~~~G~~~glqTL~QL~~~~~~~~~I~D~P~f~-~RG~----------mlD~---sR~~f~~~~~ik~~i 108 (627)
T 2epl_X 43 GRQGYYQVSYKQPHQLYRALALLSAALRSGQDEVQIEEEAAYE-DLAY----------MADC---SRNAVLNLSSAKKMI 108 (627)
T ss_dssp EETTEEEEEESSTTHHHHHHHHHHHHHHTTCSSEEEEECCSCS-EEEE----------EEEC---SSSCCBCHHHHHHHH
T ss_pred EeCCEEEEEECCHHHHHHHHHHHHHHhhcCCCceEEEeCCCCC-ccce----------EEec---CCCCCCCHHHHHHHH
Confidence 456678888777666665555542 222 34555556554 2221 2222 111 24677787777
Q ss_pred HHHHHcCCceeEEEEeC----CCCC----cccCCCHHHHHHHHHHHHhcCcEEE
Q 019899 89 NQARKRGVKVRGILICN----PANP----VGNIIPRETLYELLDFAREKNIHVI 134 (334)
Q Consensus 89 ~~~~~~~~~~~~i~~~~----p~np----tG~~~~~~~l~~i~~~~~~~~~~vi 134 (334)
+.....+-+.=.+-++. +..| .|-.++.+|+++|.+.|+++||-||
T Consensus 109 d~ma~~KlN~lh~Hl~D~~ei~~~P~l~~~~~~YT~~di~eiv~yA~~rgI~VI 162 (627)
T 2epl_X 109 EVLALMGYSTFELYMEDTYEIENQPYFGYFRGRYTVAELQEIEDYAADFDMSFV 162 (627)
T ss_dssp HHHHHHTCCEEEEECSSCBCCTTCTTTTTTTTCBCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHcCCcEEEEEeecccccCCCcccCccCCCcCHHHHHHHHHHHHHcCCEEE
Confidence 65443332322223222 1223 4668999999999999999999999
No 266
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=69.30 E-value=27 Score=28.54 Aligned_cols=102 Identities=17% Similarity=0.228 Sum_probs=54.2
Q ss_pred CcEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhh---ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 18 SQIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRF---RTGVELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 18 ~~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~---~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
+.+++.+|++.++- .+...|.+.|.+|++..-.-......... ..|.++..+.++ --|.++++++++....
T Consensus 27 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~ 101 (277)
T 4fc7_A 27 DKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMD-----VRAPPAVMAAVDQALK 101 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECC-----TTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcC-----CCCHHHHHHHHHHHHH
Confidence 35666666666764 44556677888877764332222222220 135556666542 1356677777766544
Q ss_pred cCCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 94 RGVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 94 ~~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
+.+++..++.+......+. -.+.+++++..+
T Consensus 102 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 134 (277)
T 4fc7_A 102 EFGRIDILINCAAGNFLCPAGALSFNAFKTVMD 134 (277)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEEECCcCCCCCCcccCCHHHHHHHHH
Confidence 4447785554433222222 246666666665
No 267
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=68.57 E-value=20 Score=29.29 Aligned_cols=101 Identities=13% Similarity=0.145 Sum_probs=54.4
Q ss_pred CcEEEecCcHHHHHHH-HHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCC
Q 019899 18 SQIVLTAGATPAVEIL-CFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGV 96 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~-~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~ 96 (334)
..+++.+|++.++-.. ...|.+.|.+|++..-.-........ ..+.++..+.++ --|.++++++++......+
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~~~g 101 (272)
T 4dyv_A 28 KKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAA-EIGDDALCVPTD-----VTDPDSVRALFTATVEKFG 101 (272)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHTSCCEEEECC-----TTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-HhCCCeEEEEec-----CCCHHHHHHHHHHHHHHcC
Confidence 4577777777777444 45566788888776533222333333 334344444432 1356777777766544445
Q ss_pred ceeEEEEeCCCC-Cccc--CCCHHHHHHHHH
Q 019899 97 KVRGILICNPAN-PVGN--IIPRETLYELLD 124 (334)
Q Consensus 97 ~~~~i~~~~p~n-ptG~--~~~~~~l~~i~~ 124 (334)
++..++.+.... +.+. -.+.+++++..+
T Consensus 102 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~ 132 (272)
T 4dyv_A 102 RVDVLFNNAGTGAPAIPMEDLTFAQWKQVVD 132 (272)
T ss_dssp CCCEEEECCCCCCCSSCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHH
Confidence 778554443332 2222 346666666655
No 268
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=67.47 E-value=30 Score=24.41 Aligned_cols=101 Identities=13% Similarity=0.136 Sum_probs=59.2
Q ss_pred cEEEecCcHHHHHHHH---HHhcC--CCCeEEecCCCCCChhhhhhhccCcE---EEEEeCCCCCCccccHHHHHHHHHH
Q 019899 19 QIVLTAGATPAVEILC---FCLAD--HGNALLVPSPYYPGFDRDIRFRTGVE---LIPVHCRSTDNFAFSITALDQAFNQ 90 (334)
Q Consensus 19 ~i~~~~g~~~~~~~~~---~~l~~--~gd~vl~~~p~~~~~~~~~~~~~g~~---v~~v~~~~~~~~~~~~~~l~~~l~~ 90 (334)
+++....+..-+..++ ..+.+ .+..|+...|.+..+...+. ..|.. +..+.. .+..-.+..++++++.
T Consensus 6 Ell~~~~g~~e~~lLlp~L~~l~~~~~~r~ilwi~pp~~~~~~~L~-~~Gl~~~rll~v~~---~~~~d~lwa~EqaLrs 81 (119)
T 1ofu_X 6 ELSLSGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLR-RAGLNRERILLLQA---KDNAAALALSCEALRL 81 (119)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHTTCSSSSEEEEESCCTTSCHHHHH-HTTCCTTSEEEECC---SSHHHHHHHHHHHHHH
T ss_pred EEeecCCCccHHHHHHHHHHHhcccccCccEEEECCCCCCCHHHHH-HcCCChHHEEEEEC---CCcHHHHHHHHHHHhc
Confidence 3444444433333333 34453 44567777777777888887 77744 555553 2223355777788877
Q ss_pred HHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEE
Q 019899 91 ARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVI 134 (334)
Q Consensus 91 ~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi 134 (334)
+...+|+ ..+. -++..+.+++.-.+++.+...+
T Consensus 82 -----g~~~aVl-~wl~-----~l~~~~~RRLqlAA~~g~~~~~ 114 (119)
T 1ofu_X 82 -----GRSHTVV-SWLE-----PLSRAARKQLSRAAQLGQAQSL 114 (119)
T ss_dssp -----TCEEEEE-ECCS-----SCCHHHHHHHHHHHHHHTCEEE
T ss_pred -----CCccEEE-ECCC-----cCChHHHHHHHHHHHhCCCeEE
Confidence 2555454 4332 2677788888887777665544
No 269
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=67.16 E-value=32 Score=27.54 Aligned_cols=101 Identities=10% Similarity=0.076 Sum_probs=52.9
Q ss_pred CcEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCC
Q 019899 18 SQIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGV 96 (334)
Q Consensus 18 ~~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~ 96 (334)
+.+++.+|++.++- .+...|.+.|.+|++..-.-.......+ ..+.+...+.++ --|.++++++++....+.+
T Consensus 9 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~~~g 82 (248)
T 3op4_A 9 GKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISD-YLGDNGKGMALN-----VTNPESIEAVLKAITDEFG 82 (248)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HHGGGEEEEECC-----TTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HhcccceEEEEe-----CCCHHHHHHHHHHHHHHcC
Confidence 34666666666664 4445566788888776433222222222 233334444432 2356777777766555445
Q ss_pred ceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 97 KVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 97 ~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
++..++.+....+.+. -.+.+++++..+
T Consensus 83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 112 (248)
T 3op4_A 83 GVDILVNNAGITRDNLLMRMKEEEWSDIME 112 (248)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 7775554433333222 346666666655
No 270
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=67.05 E-value=28 Score=27.95 Aligned_cols=100 Identities=17% Similarity=0.237 Sum_probs=57.3
Q ss_pred cEEEecCcHHHHHHHHHHhcCCCCeEEec---CCC------C-----CChhhhhhhccCcEEEEEeCCCCCCccccHHHH
Q 019899 19 QIVLTAGATPAVEILCFCLADHGNALLVP---SPY------Y-----PGFDRDIRFRTGVELIPVHCRSTDNFAFSITAL 84 (334)
Q Consensus 19 ~i~~~~g~~~~~~~~~~~l~~~gd~vl~~---~p~------~-----~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l 84 (334)
-+++.|||.....++..+. +.|..|..- .|. | ......++ .+|.+.+.+++..+. .--.+++
T Consensus 7 vvvl~SGGkDSs~al~~l~-~~G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~-~LGIpl~~v~~~g~~--~~e~e~l 82 (237)
T 3rjz_A 7 VAVLYSGGKDSNYALYWAI-KNRFSVKFLVTMVSENEESYMYHTINANLTDLQAR-ALGIPLVKGFTQGEK--EKEVEDL 82 (237)
T ss_dssp EEEECCSSHHHHHHHHHHH-HTTCEEEEEEEEECC--------CCSSSHHHHHHH-HHTCCEEEEEC--------CHHHH
T ss_pred EEEEecCcHHHHHHHHHHH-HcCCeEEEEEEEcCCCCCccccCCccHHHHHHHHH-HcCCCEEEEECCCCc--hHHHHHH
Confidence 3677888887777766554 345444211 111 1 11223344 678888888874221 2235667
Q ss_pred HHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEE
Q 019899 85 DQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVI 134 (334)
Q Consensus 85 ~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi 134 (334)
.++++.. .+.++ .+|.+++..+...+-++|.+.|+..+
T Consensus 83 ~~~l~~~-----~i~~v-------v~Gdi~s~yqr~r~e~vc~~~gl~~~ 120 (237)
T 3rjz_A 83 KRVLSGL-----KIQGI-------VAGALASKYQRKRIEKVAKELGLEVY 120 (237)
T ss_dssp HHHHTTS-----CCSEE-------ECC---CCSHHHHHHHHHHHTTCEEE
T ss_pred HHHHHhc-----CCcEE-------EECCcchHHHHHHHHHHHHHcCCEEE
Confidence 7777642 34433 36888888888999999999998877
No 271
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=66.89 E-value=12 Score=27.31 Aligned_cols=59 Identities=14% Similarity=0.127 Sum_probs=42.1
Q ss_pred cccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHH-HHHHHHHH-HhcCcEEE-Eeccccc
Q 019899 78 AFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRET-LYELLDFA-REKNIHVI-SDEIYGG 141 (334)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~-l~~i~~~~-~~~~~~vi-~D~~~~~ 141 (334)
..+++.|.+.+++. ++..+++-.|-|+.|..-+..+ .++.++.. .+.+++|. +||-++.
T Consensus 39 ~~~~~~l~~li~e~-----~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~~lpV~~~DERlTT 100 (138)
T 1nu0_A 39 TPDWNIIERLLKEW-----QPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLST 100 (138)
T ss_dssp EECHHHHHHHHHHH-----CCSEEEEEEEECTTSCBCHHHHHHHHHHHHHHHHHCCCEEEEEEECCC
T ss_pred chHHHHHHHHHHHc-----CCCEEEEecccCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcCH
Confidence 45789999999987 8888999999888887654332 34444433 33466554 8998764
No 272
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=65.95 E-value=38 Score=27.26 Aligned_cols=94 Identities=14% Similarity=0.158 Sum_probs=55.2
Q ss_pred CcEEEecCcHHHHHHH-HHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCC
Q 019899 18 SQIVLTAGATPAVEIL-CFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGV 96 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~-~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~ 96 (334)
..+++.+|++.++=.. ...|.+.|-+|++..-.-.... . ..+.++..+.++ --|.+++++.+++. +
T Consensus 11 GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~---~-~~~~~~~~~~~D-----v~~~~~v~~~~~~~----g 77 (242)
T 4b79_A 11 GQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVH---A-PRHPRIRREELD-----ITDSQRLQRLFEAL----P 77 (242)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTT---S-CCCTTEEEEECC-----TTCHHHHHHHHHHC----S
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHh---h-hhcCCeEEEEec-----CCCHHHHHHHHHhc----C
Confidence 5677777877788544 4556778888777653322211 1 334445555542 12567777777664 4
Q ss_pred ceeEEEEeCC-CCCcccCCCHHHHHHHHHH
Q 019899 97 KVRGILICNP-ANPVGNIIPRETLYELLDF 125 (334)
Q Consensus 97 ~~~~i~~~~p-~nptG~~~~~~~l~~i~~~ 125 (334)
++. ++++|. .+....-++.++++++.++
T Consensus 78 ~iD-iLVNNAGi~~~~~~~~~~~w~~~~~v 106 (242)
T 4b79_A 78 RLD-VLVNNAGISRDREEYDLATFERVLRL 106 (242)
T ss_dssp CCS-EEEECCCCCCGGGGGSHHHHHHHHHH
T ss_pred CCC-EEEECCCCCCCcccCCHHHHHHHHHH
Confidence 677 555554 3333445677777777764
No 273
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=65.44 E-value=28 Score=28.24 Aligned_cols=100 Identities=11% Similarity=0.107 Sum_probs=52.0
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
.+++.+|++.++- .+...|.+.|.+|++..-.-.......+ ..+.++..+..+ --|.++++++++......++
T Consensus 28 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~ 101 (266)
T 3grp_A 28 RKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAA-DLGKDVFVFSAN-----LSDRKSIKQLAEVAEREMEG 101 (266)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHCSSEEEEECC-----TTSHHHHHHHHHHHHHHHTS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HhCCceEEEEee-----cCCHHHHHHHHHHHHHHcCC
Confidence 4666666666764 4445566788877776543222333333 345556555542 23567777777665444447
Q ss_pred eeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 98 VRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 98 ~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
+..++.+....+.+. -.+.+++++..+
T Consensus 102 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 130 (266)
T 3grp_A 102 IDILVNNAGITRDGLFVRMQDQDWDDVLA 130 (266)
T ss_dssp CCEEEECCCCC-----CCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 785554433333232 234445555544
No 274
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=65.42 E-value=33 Score=27.44 Aligned_cols=100 Identities=13% Similarity=0.050 Sum_probs=51.2
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
..++.+|++.++- .+...|.+.|.+|++..-.-........ ..+.++..+..+ --|.++++++++......++
T Consensus 7 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~ 80 (253)
T 1hxh_A 7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAA-ELGERSMFVRHD-----VSSEADWTLVMAAVQRRLGT 80 (253)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-HHCTTEEEECCC-----TTCHHHHHHHHHHHHHHHCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HcCCceEEEEcc-----CCCHHHHHHHHHHHHHHcCC
Confidence 4566667766764 3445566778887776433222222222 224445555432 23567777776655443346
Q ss_pred eeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 98 VRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 98 ~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
+..++.+....+.+. -.+.+++++..+
T Consensus 81 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 109 (253)
T 1hxh_A 81 LNVLVNNAGILLPGDMETGRLEDFSRLLK 109 (253)
T ss_dssp CCEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 775554443333232 235555655554
No 275
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=65.39 E-value=37 Score=27.27 Aligned_cols=100 Identities=9% Similarity=0.047 Sum_probs=53.0
Q ss_pred cEEEecCcHHHH-HHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 19 QIVLTAGATPAV-EILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 19 ~i~~~~g~~~~~-~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
.+++.+|++.++ ..+...|.+.|.+|++..-.-.......+ ..+.++..+..+ --|.+++++.++......++
T Consensus 9 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~ 82 (255)
T 4eso_A 9 KKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIRE-EFGPRVHALRSD-----IADLNEIAVLGAAAGQTLGA 82 (255)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHGGGEEEEECC-----TTCHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HhCCcceEEEcc-----CCCHHHHHHHHHHHHHHhCC
Confidence 455556666666 44455567788888776543322333333 335556555542 23566677666655444346
Q ss_pred eeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 98 VRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 98 ~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
+..++.+....+.+. -.+.+++++..+
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (255)
T 4eso_A 83 IDLLHINAGVSELEPFDQVSEASYDRQFA 111 (255)
T ss_dssp EEEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 775544433332222 236666666655
No 276
>3ozo_A N-acetylglucosaminidase; beta-N-acetyl-D-hexosaminidase, hydrolase-hydrolase inhibito; HET: NGT; 2.00A {Ostrinia furnacalis} PDB: 3nsn_A* 3nsm_A* 3ozp_A* 3s6t_A* 3vtr_A*
Probab=65.29 E-value=30 Score=31.89 Aligned_cols=24 Identities=17% Similarity=0.492 Sum_probs=22.4
Q ss_pred ccCCCHHHHHHHHHHHHhcCcEEE
Q 019899 111 GNIIPRETLYELLDFAREKNIHVI 134 (334)
Q Consensus 111 G~~~~~~~l~~i~~~~~~~~~~vi 134 (334)
+..++.+|+++|.+.|+++||-||
T Consensus 250 ~~~YT~~di~eiv~yA~~rgI~VI 273 (572)
T 3ozo_A 250 QKVYTKAAIREVVRFGLERGVRVL 273 (572)
T ss_dssp SSCBCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCcCHHHHHHHHHHHHHhCCcee
Confidence 457899999999999999999999
No 277
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=64.90 E-value=65 Score=27.39 Aligned_cols=100 Identities=15% Similarity=0.184 Sum_probs=53.4
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCC----------hhhhhhhccCcEEEEEeCCCCCCccccHHHHHHH
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPG----------FDRDIRFRTGVELIPVHCRSTDNFAFSITALDQA 87 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~----------~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~ 87 (334)
.+++.+|++.++- .+...|.+.|.+|++..-.-.. ....+. ..|.++..+.++ --|.+.++++
T Consensus 46 k~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~-~~g~~~~~~~~D-----v~d~~~v~~~ 119 (346)
T 3kvo_A 46 CTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIE-AVGGKALPCIVD-----VRDEQQISAA 119 (346)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHH-HTTCEEEEEECC-----TTCHHHHHHH
T ss_pred CEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHH-hcCCeEEEEEcc-----CCCHHHHHHH
Confidence 5666666666764 4455566788777765432221 112223 346666666652 2356777777
Q ss_pred HHHHHHcCCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 88 FNQARKRGVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 88 l~~~~~~~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
++......+++..++.+......+. -.+.++++++.+
T Consensus 120 ~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~ 158 (346)
T 3kvo_A 120 VEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMN 158 (346)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 7765544447775554443332222 345556655544
No 278
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=64.52 E-value=31 Score=27.98 Aligned_cols=101 Identities=14% Similarity=0.249 Sum_probs=51.1
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhh---ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRF---RTGVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~---~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
.+++.+|++.++- .+...|.+.|.+|++..-.-......... ..|.++..+.++ --|.+.++++++.....
T Consensus 22 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D-----l~~~~~v~~~~~~~~~~ 96 (267)
T 1vl8_A 22 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCD-----VSNYEEVKKLLEAVKEK 96 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECC-----TTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcC-----CCCHHHHHHHHHHHHHH
Confidence 4556666666664 44555667887777654322212111110 125455555542 12566777776655443
Q ss_pred CCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 95 GVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 95 ~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
-+++.+++.+......+. -.+.++++++.+
T Consensus 97 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 128 (267)
T 1vl8_A 97 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIE 128 (267)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 346775554433322221 245566666555
No 279
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=64.47 E-value=12 Score=31.86 Aligned_cols=37 Identities=16% Similarity=0.142 Sum_probs=31.7
Q ss_pred CCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccc
Q 019899 107 ANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSI 143 (334)
Q Consensus 107 ~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~ 143 (334)
.+|.|-..+.+++.++++.|+++|+.|++|--|++.+
T Consensus 50 ~~P~~g~~~~~~~~~~~~~A~~~GlkV~ld~Hysd~W 86 (332)
T 1hjs_A 50 VNPADGNYNLDYNIAIAKRAKAAGLGVYIDFHYSDTW 86 (332)
T ss_dssp SSCTTCTTSHHHHHHHHHHHHHTTCEEEEEECCSSSC
T ss_pred eCCCCCcCCHHHHHHHHHHHHHCCCEEEEEeccCCCc
Confidence 5677888898999999999999999999997666544
No 280
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=64.45 E-value=28 Score=28.47 Aligned_cols=102 Identities=16% Similarity=0.144 Sum_probs=53.9
Q ss_pred CcEEEecCcHHHHHH-HHHHhcCCCCeEEecCCCCCChhhhhhh--ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 18 SQIVLTAGATPAVEI-LCFCLADHGNALLVPSPYYPGFDRDIRF--RTGVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~-~~~~l~~~gd~vl~~~p~~~~~~~~~~~--~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
..+++.+|++.++-. +...|.+.|.+|++..-.-.......+. ..|.++..+.++ --|.++++++++.....
T Consensus 24 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~~ 98 (279)
T 3sju_A 24 PQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCD-----VTSTDEVHAAVAAAVER 98 (279)
T ss_dssp -CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECC-----TTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECC-----CCCHHHHHHHHHHHHHH
Confidence 456677777777744 4455667888877665332222222110 235556665542 23567777777665444
Q ss_pred CCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 95 GVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 95 ~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
.+++..++.+....+.+. -.+.++++++.+
T Consensus 99 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 130 (279)
T 3sju_A 99 FGPIGILVNSAGRNGGGETADLDDALWADVLD 130 (279)
T ss_dssp HCSCCEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred cCCCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 347775554443333222 346666666555
No 281
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=64.40 E-value=21 Score=29.05 Aligned_cols=101 Identities=19% Similarity=0.210 Sum_probs=53.7
Q ss_pred CcEEEecCcHHHHHH-HHHHhcCCCCeEEecCCCCCC-hh---hhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHH
Q 019899 18 SQIVLTAGATPAVEI-LCFCLADHGNALLVPSPYYPG-FD---RDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQAR 92 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~-~~~~l~~~gd~vl~~~p~~~~-~~---~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~ 92 (334)
+.+++.+|++.++-. +...|.+.|.+|++..-.... .. ..+. ..|.++..+.++ --|.+.++++++...
T Consensus 28 ~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D-----~~d~~~v~~~~~~~~ 101 (269)
T 4dmm_A 28 DRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIA-AAGGEAFAVKAD-----VSQESEVEALFAAVI 101 (269)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH-HTTCCEEEEECC-----TTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHH-hcCCcEEEEECC-----CCCHHHHHHHHHHHH
Confidence 356666777667744 455566788887764321111 11 1222 235556666542 235677777776654
Q ss_pred HcCCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 93 KRGVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 93 ~~~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
...+++..++.+....+.+. -.+.+++++..+
T Consensus 102 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 135 (269)
T 4dmm_A 102 ERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLD 135 (269)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 44446775554443333222 346666666665
No 282
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=64.36 E-value=35 Score=28.23 Aligned_cols=100 Identities=14% Similarity=0.216 Sum_probs=52.8
Q ss_pred cEEEecCcHHHHHH-HHHHhcCCCCeEEecCCCC---------C---Ch---hhhhhhccCcEEEEEeCCCCCCccccHH
Q 019899 19 QIVLTAGATPAVEI-LCFCLADHGNALLVPSPYY---------P---GF---DRDIRFRTGVELIPVHCRSTDNFAFSIT 82 (334)
Q Consensus 19 ~i~~~~g~~~~~~~-~~~~l~~~gd~vl~~~p~~---------~---~~---~~~~~~~~g~~v~~v~~~~~~~~~~~~~ 82 (334)
.+++.+|++.++-. +...|.+.|.+|++..-.- . .. ...+. ..|.++..+.++ --|.+
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D-----v~~~~ 102 (299)
T 3t7c_A 29 KVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE-ALGRRIIASQVD-----VRDFD 102 (299)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHH-HTTCCEEEEECC-----TTCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHH-hcCCceEEEECC-----CCCHH
Confidence 46666666667644 4555667888877653220 0 01 11122 245566666652 23567
Q ss_pred HHHHHHHHHHHcCCceeEEEEeCCCCCccc---CCCHHHHHHHHH
Q 019899 83 ALDQAFNQARKRGVKVRGILICNPANPVGN---IIPRETLYELLD 124 (334)
Q Consensus 83 ~l~~~l~~~~~~~~~~~~i~~~~p~nptG~---~~~~~~l~~i~~ 124 (334)
+++++++......+++..++.+....+.+. -.+.+++++..+
T Consensus 103 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 147 (299)
T 3t7c_A 103 AMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMID 147 (299)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHH
Confidence 777777665444446775544433332222 246666766665
No 283
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=63.82 E-value=31 Score=27.35 Aligned_cols=99 Identities=16% Similarity=0.244 Sum_probs=51.0
Q ss_pred EEEecCcHHHHHHH-HHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCce
Q 019899 20 IVLTAGATPAVEIL-CFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKV 98 (334)
Q Consensus 20 i~~~~g~~~~~~~~-~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 98 (334)
+++.+|++.++-.. ...|.+.|.+|++..-.-........ ..+..+..+.++ --|.++++++++......+++
T Consensus 5 ~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~i 78 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQEL-LLGNAVIGIVAD-----LAHHEDVDVAFAAAVEWGGLP 78 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHGGGEEEEECC-----TTSHHHHHHHHHHHHHHHCSC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-HhcCCceEEECC-----CCCHHHHHHHHHHHHHhcCCC
Confidence 45556666666443 45566788888776543222222222 223335555442 125667777766654444477
Q ss_pred eEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 99 RGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 99 ~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
..++.+....+.+. -.+.++++++.+
T Consensus 79 d~lvnnAg~~~~~~~~~~~~~~~~~~~~ 106 (235)
T 3l6e_A 79 ELVLHCAGTGEFGPVGVYTAEQIRRVME 106 (235)
T ss_dssp SEEEEECCCC------CCCHHHHHHHHH
T ss_pred cEEEECCCCCCCCChHhCCHHHHHHHHH
Confidence 85555544333222 346666666665
No 284
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=63.75 E-value=41 Score=27.08 Aligned_cols=102 Identities=12% Similarity=0.042 Sum_probs=54.3
Q ss_pred CcEEEecCcHHHHHHH-HHHhcCCCCeEEecCCCCCChhhhhhh--ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 18 SQIVLTAGATPAVEIL-CFCLADHGNALLVPSPYYPGFDRDIRF--RTGVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~-~~~l~~~gd~vl~~~p~~~~~~~~~~~--~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
+.+++.+|++.++-.. ...|.+.|.+|++..-.-......... ..|.++..+.++ --|.+.+.++++.....
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D-----~~~~~~v~~~~~~~~~~ 103 (262)
T 3rkr_A 29 GQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACD-----LSHSDAIAAFATGVLAA 103 (262)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECC-----TTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEec-----CCCHHHHHHHHHHHHHh
Confidence 3566666766676443 445667788877765433222222110 235566666542 13567777777665444
Q ss_pred CCceeEEEEeCCC-CCccc--CCCHHHHHHHHH
Q 019899 95 GVKVRGILICNPA-NPVGN--IIPRETLYELLD 124 (334)
Q Consensus 95 ~~~~~~i~~~~p~-nptG~--~~~~~~l~~i~~ 124 (334)
.+++..++.+... .+.+. ..+.+++++..+
T Consensus 104 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 136 (262)
T 3rkr_A 104 HGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIA 136 (262)
T ss_dssp HSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHH
T ss_pred cCCCCEEEECCCccCCCCCcccCCHHHHHHHHH
Confidence 3467866555443 23222 245566665554
No 285
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=63.10 E-value=32 Score=28.80 Aligned_cols=101 Identities=11% Similarity=0.047 Sum_probs=54.2
Q ss_pred CcEEEecCcHHHHHH-HHHHhcCCCCeEEecCCC----------CCChhh---hhhhccCcEEEEEeCCCCCCccccHHH
Q 019899 18 SQIVLTAGATPAVEI-LCFCLADHGNALLVPSPY----------YPGFDR---DIRFRTGVELIPVHCRSTDNFAFSITA 83 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~-~~~~l~~~gd~vl~~~p~----------~~~~~~---~~~~~~g~~v~~v~~~~~~~~~~~~~~ 83 (334)
+.+++.+|++.++-. +...|.+.|.+|++..-. -..... .+. ..|.++..+.++ --|.++
T Consensus 27 gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D-----v~d~~~ 100 (322)
T 3qlj_A 27 GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEIT-AAGGEAVADGSN-----VADWDQ 100 (322)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHH-HTTCEEEEECCC-----TTSHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHH-hcCCcEEEEECC-----CCCHHH
Confidence 356777777777744 445566788888775422 111111 122 245566666542 235677
Q ss_pred HHHHHHHHHHcCCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 84 LDQAFNQARKRGVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 84 l~~~l~~~~~~~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
++++++......+++..++.+......+. -.+.+++++..+
T Consensus 101 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 143 (322)
T 3qlj_A 101 AAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIA 143 (322)
T ss_dssp HHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 77777665544346774444333332221 346666666665
No 286
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus}
Probab=62.87 E-value=6.7 Score=31.13 Aligned_cols=116 Identities=13% Similarity=0.105 Sum_probs=64.9
Q ss_pred HHHHHHHHHHhcCCCCeEEecCCCCCCh---hhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEE
Q 019899 27 TPAVEILCFCLADHGNALLVPSPYYPGF---DRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILI 103 (334)
Q Consensus 27 ~~~~~~~~~~l~~~gd~vl~~~p~~~~~---~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~ 103 (334)
|+++..+ ..+...|.++++..|.-..- ..... ..|.+...+++... +++.+.+.. ++.+|++
T Consensus 43 T~Llr~~-~r~~~~g~kvli~kp~~D~R~~~~~I~S-r~G~~~~a~~v~~~-------~di~~~i~~------~~dvV~I 107 (219)
T 3e2i_A 43 EELIRRL-RRGIYAKQKVVVFKPAIDDRYHKEKVVS-HNGNAIEAINISKA-------SEIMTHDLT------NVDVIGI 107 (219)
T ss_dssp HHHHHHH-HHHHHTTCCEEEEEEC-----------C-BTTBCCEEEEESSG-------GGGGGSCCT------TCSEEEE
T ss_pred HHHHHHH-HHHHHcCCceEEEEeccCCcchhhhHHH-hcCCceeeEEeCCH-------HHHHHHHhc------CCCEEEE
Confidence 4455554 44445667788887754322 23444 66766666665321 222222222 6777888
Q ss_pred eCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhhccccCCCcEEEE
Q 019899 104 CNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILEAEEVDKDRVHII 169 (334)
Q Consensus 104 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (334)
...++ ++.+.++.+.+++ ..|+.||+=.--.+ |.+..+.....+.+- .+.+.-+
T Consensus 108 DEaQF-----f~~~~v~~l~~la-~~gi~Vi~~GLd~D--F~~~~F~~~~~Ll~~----Ad~v~kl 161 (219)
T 3e2i_A 108 DEVQF-----FDDEIVSIVEKLS-ADGHRVIVAGLDMD--FRGEPFEPMPKLMAV----SEQVTKL 161 (219)
T ss_dssp CCGGG-----SCTHHHHHHHHHH-HTTCEEEEEEESBC--TTSCBCTTHHHHHHH----CSEEEEE
T ss_pred echhc-----CCHHHHHHHHHHH-HCCCEEEEeecccc--cccCCCccHHHHHHh----cceEEEe
Confidence 87776 5666777888887 68999997665444 446666666665552 4445444
No 287
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=62.72 E-value=57 Score=26.03 Aligned_cols=82 Identities=12% Similarity=0.129 Sum_probs=44.0
Q ss_pred cEEEecCcHHHH-HHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 19 QIVLTAGATPAV-EILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 19 ~i~~~~g~~~~~-~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
..++.+|++.++ ..+...|.+.|.+|++..-.-.......+ ..+.++..+.++ --|.+.++++++......++
T Consensus 13 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~ 86 (265)
T 2o23_A 13 LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAK-KLGNNCVFAPAD-----VTSEKDVQTALALAKGKFGR 86 (265)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHH-HHCTTEEEEECC-----TTCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHH-HhCCceEEEEcC-----CCCHHHHHHHHHHHHHHCCC
Confidence 455555666666 44455566778777766443333333333 334445555542 12566777776655443346
Q ss_pred eeEEEEeCC
Q 019899 98 VRGILICNP 106 (334)
Q Consensus 98 ~~~i~~~~p 106 (334)
+.+++.+..
T Consensus 87 id~li~~Ag 95 (265)
T 2o23_A 87 VDVAVNCAG 95 (265)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCc
Confidence 775555443
No 288
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=62.69 E-value=22 Score=28.97 Aligned_cols=101 Identities=13% Similarity=0.187 Sum_probs=54.0
Q ss_pred CcEEEecCcHHHHHH-HHHHhcCCCCeEEecCCCC-CCh---hhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHH
Q 019899 18 SQIVLTAGATPAVEI-LCFCLADHGNALLVPSPYY-PGF---DRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQAR 92 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~-~~~~l~~~gd~vl~~~p~~-~~~---~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~ 92 (334)
+.+++.+|++.++-. +...|.+.|.+|++..-.- ... ...++ ..|.++..+.++ --|.++++++++...
T Consensus 18 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D-----v~~~~~v~~~~~~~~ 91 (270)
T 3is3_A 18 GKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIK-ALGSDAIAIKAD-----IRQVPEIVKLFDQAV 91 (270)
T ss_dssp TCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH-HTTCCEEEEECC-----TTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH-hcCCcEEEEEcC-----CCCHHHHHHHHHHHH
Confidence 356777777777744 4455667888887642211 111 11222 245566666642 235677777776655
Q ss_pred HcCCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 93 KRGVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 93 ~~~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
.+.+++..++.+....+.+. -.+.+++++..+
T Consensus 92 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 125 (270)
T 3is3_A 92 AHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFS 125 (270)
T ss_dssp HHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 44446775443333333332 236666666665
No 289
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=62.42 E-value=28 Score=27.95 Aligned_cols=102 Identities=12% Similarity=0.125 Sum_probs=50.8
Q ss_pred CcEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhhc--c--C-cEEEEEeCCCCCCccccHHHHHHHHHHH
Q 019899 18 SQIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRFR--T--G-VELIPVHCRSTDNFAFSITALDQAFNQA 91 (334)
Q Consensus 18 ~~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~--~--g-~~v~~v~~~~~~~~~~~~~~l~~~l~~~ 91 (334)
+.+++.+|++.++- .+...|.+.|.+|++..-.-.......+.. . + .++..+.++ --|.++++++++..
T Consensus 7 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~ 81 (250)
T 3nyw_A 7 KGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLD-----ITDCTKADTEIKDI 81 (250)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECC-----TTCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEecc-----CCCHHHHHHHHHHH
Confidence 34666666666764 444556677878777653322222222100 0 2 344444432 13567777777665
Q ss_pred HHcCCceeEEEEeCCCCCcc-cCCCHHHHHHHHH
Q 019899 92 RKRGVKVRGILICNPANPVG-NIIPRETLYELLD 124 (334)
Q Consensus 92 ~~~~~~~~~i~~~~p~nptG-~~~~~~~l~~i~~ 124 (334)
....+++..++.+......+ ...+.+++++..+
T Consensus 82 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~ 115 (250)
T 3nyw_A 82 HQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIME 115 (250)
T ss_dssp HHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHH
T ss_pred HHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHH
Confidence 54445778555444333222 2334455555544
No 290
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=62.38 E-value=41 Score=26.91 Aligned_cols=100 Identities=17% Similarity=0.166 Sum_probs=52.9
Q ss_pred cEEEecCcHHHH-HHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 19 QIVLTAGATPAV-EILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 19 ~i~~~~g~~~~~-~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
.+++.+|++.++ ..+...|.+.|.+|++..-.-........ ..+.++..+.++ --|.+++++++++.....++
T Consensus 10 k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D-----~~~~~~~~~~~~~~~~~~g~ 83 (261)
T 3n74_A 10 KVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAG-EIGDAALAVAAD-----ISKEADVDAAVEAALSKFGK 83 (261)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHCTTEEEEECC-----TTSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-HhCCceEEEEec-----CCCHHHHHHHHHHHHHhcCC
Confidence 455556666666 34455566778777776543333333333 344455555542 13566777777665444346
Q ss_pred eeEEEEeCCCC-Cccc--CCCHHHHHHHHH
Q 019899 98 VRGILICNPAN-PVGN--IIPRETLYELLD 124 (334)
Q Consensus 98 ~~~i~~~~p~n-ptG~--~~~~~~l~~i~~ 124 (334)
+..++.+.... +.+. ..+.+++++..+
T Consensus 84 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 113 (261)
T 3n74_A 84 VDILVNNAGIGHKPQNAELVEPEEFDRIVG 113 (261)
T ss_dssp CCEEEECCCCCCCSCCGGGSCHHHHHHHHH
T ss_pred CCEEEECCccCCCCCCcccCCHHHHHHHHH
Confidence 77555544322 1222 246666666655
No 291
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=62.09 E-value=15 Score=30.67 Aligned_cols=49 Identities=22% Similarity=0.432 Sum_probs=33.8
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEecccc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYG 140 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~ 140 (334)
-.+.++++++. +++.+++.+. | ++.++.+++.+.|+++++.++-.++.+
T Consensus 84 ~~~~v~ea~~~------Gi~~vVi~t~----G--~~~~~~~~l~~~A~~~gi~viGPNc~G 132 (297)
T 2yv2_A 84 APDAVYEAVDA------GIRLVVVITE----G--IPVHDTMRFVNYARQKGATIIGPNCPG 132 (297)
T ss_dssp HHHHHHHHHHT------TCSEEEECCC----C--CCHHHHHHHHHHHHHHTCEEECSSSCE
T ss_pred HHHHHHHHHHC------CCCEEEEECC----C--CCHHHHHHHHHHHHHcCCEEEcCCCCe
Confidence 45666666664 6775555432 3 356778999999999999988666543
No 292
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=61.75 E-value=24 Score=28.88 Aligned_cols=101 Identities=14% Similarity=0.178 Sum_probs=52.1
Q ss_pred CcEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCC-----------C-Chhh-------hhhhccCcEEEEEeCCCCCCc
Q 019899 18 SQIVLTAGATPAVE-ILCFCLADHGNALLVPSPYY-----------P-GFDR-------DIRFRTGVELIPVHCRSTDNF 77 (334)
Q Consensus 18 ~~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~-----------~-~~~~-------~~~~~~g~~v~~v~~~~~~~~ 77 (334)
+.+++.+|++.++- .+...|.+.|.+|++..-.- . .... .+. ..+.++..+.++
T Consensus 11 ~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D----- 84 (286)
T 3uve_A 11 GKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVK-GHNRRIVTAEVD----- 84 (286)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHH-TTTCCEEEEECC-----
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHh-hcCCceEEEEcC-----
Confidence 34666666666664 44556677888877653221 0 0011 111 234556665542
Q ss_pred cccHHHHHHHHHHHHHcCCceeEEEEeCCCCCccc---CCCHHHHHHHHH
Q 019899 78 AFSITALDQAFNQARKRGVKVRGILICNPANPVGN---IIPRETLYELLD 124 (334)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~---~~~~~~l~~i~~ 124 (334)
--|.+.++++++......+++..++.+....+.+. -.+.+++++..+
T Consensus 85 v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 134 (286)
T 3uve_A 85 VRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMID 134 (286)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHH
Confidence 13566777776655444346775544433333222 346666666655
No 293
>1c7s_A Beta-N-acetylhexosaminidase; glycosyl hydrolase, chitinolysis, A/B(TIM)-barrel, site directed mutagenesis; HET: CBS; 1.80A {Serratia marcescens} SCOP: b.1.18.2 b.2.2.3 c.1.8.6 d.92.2.1 PDB: 1c7t_A* 1qba_A 1qbb_A*
Probab=61.66 E-value=17 Score=35.25 Aligned_cols=26 Identities=23% Similarity=0.580 Sum_probs=23.7
Q ss_pred CcccCCCHHHHHHHHHHHHhcCcEEE
Q 019899 109 PVGNIIPRETLYELLDFAREKNIHVI 134 (334)
Q Consensus 109 ptG~~~~~~~l~~i~~~~~~~~~~vi 134 (334)
+.|-.++.+|+++|++.|+++||-||
T Consensus 392 ~~~g~YT~~direIv~YA~~rgI~VI 417 (858)
T 1c7s_A 392 VYGGFFSRQDYIDIIKYAQARQIEVI 417 (858)
T ss_dssp CEECCBCHHHHHHHHHHHHTTTCEEE
T ss_pred ccCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 34668999999999999999999999
No 294
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=61.54 E-value=47 Score=26.72 Aligned_cols=101 Identities=12% Similarity=0.145 Sum_probs=54.3
Q ss_pred CcEEEecCcHHHHHH-HHHHhcCCCCeEEec-CCCCCChhhh---hhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHH
Q 019899 18 SQIVLTAGATPAVEI-LCFCLADHGNALLVP-SPYYPGFDRD---IRFRTGVELIPVHCRSTDNFAFSITALDQAFNQAR 92 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~-~~~~l~~~gd~vl~~-~p~~~~~~~~---~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~ 92 (334)
+.+++.+|++.++-. +...|.+.|.+|++. ...-...... +. ..|.++..+..+ --|.++++++++...
T Consensus 4 ~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D-----v~~~~~v~~~~~~~~ 77 (258)
T 3oid_A 4 NKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIE-KLGVKVLVVKAN-----VGQPAKIKEMFQQID 77 (258)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH-TTTCCEEEEECC-----TTCHHHHHHHHHHHH
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH-hcCCcEEEEEcC-----CCCHHHHHHHHHHHH
Confidence 456677777777744 445566788877764 3322222221 22 235556666542 235677777776655
Q ss_pred HcCCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 93 KRGVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 93 ~~~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
...+++..++.+....+.+. -.+.+++++..+
T Consensus 78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (258)
T 3oid_A 78 ETFGRLDVFVNNAASGVLRPVMELEETHWDWTMN 111 (258)
T ss_dssp HHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 44446775554443332222 346666666555
No 295
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=61.50 E-value=24 Score=28.76 Aligned_cols=101 Identities=10% Similarity=0.148 Sum_probs=52.3
Q ss_pred CcEEEecCcHHHH-HHHHHHhcCCCCeEEecCCC--------CC--C---hhh---hhhhccCcEEEEEeCCCCCCcccc
Q 019899 18 SQIVLTAGATPAV-EILCFCLADHGNALLVPSPY--------YP--G---FDR---DIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 18 ~~i~~~~g~~~~~-~~~~~~l~~~gd~vl~~~p~--------~~--~---~~~---~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
+.+++.+|++.++ ..+...|.+.|.+|++..-. +. . ... .+. ..+.++..+.++ --|
T Consensus 11 ~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D-----~~~ 84 (277)
T 3tsc_A 11 GRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVE-AANRRIVAAVVD-----TRD 84 (277)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHH-HTTCCEEEEECC-----TTC
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHH-hcCCeEEEEECC-----CCC
Confidence 3566666666676 44455566788877765321 00 0 111 112 235556655542 235
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
.+.+++.+++...+.+++..++.+....+.+. -.+.+++++..+
T Consensus 85 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 130 (277)
T 3tsc_A 85 FDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMD 130 (277)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 67777777665444346775544433333222 346666666655
No 296
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=60.92 E-value=43 Score=26.86 Aligned_cols=103 Identities=7% Similarity=0.130 Sum_probs=54.7
Q ss_pred CcEEEecCcHHHHHH-HHHHhcCCCCeEEecCCCCCChhhhhhh--ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 18 SQIVLTAGATPAVEI-LCFCLADHGNALLVPSPYYPGFDRDIRF--RTGVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~-~~~~l~~~gd~vl~~~p~~~~~~~~~~~--~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
+.+++.+|++.++-. +...|.+.|.+|++..-.-......... ..+.++..+.++ --|.++++++++....+
T Consensus 6 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~ 80 (257)
T 3imf_A 6 EKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMD-----VRNTDDIQKMIEQIDEK 80 (257)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECC-----TTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcc-----CCCHHHHHHHHHHHHHH
Confidence 356677777777744 4555667888887754332222222210 234455555542 23567777777665444
Q ss_pred CCceeEEEEeCCCCCcc--cCCCHHHHHHHHHH
Q 019899 95 GVKVRGILICNPANPVG--NIIPRETLYELLDF 125 (334)
Q Consensus 95 ~~~~~~i~~~~p~nptG--~~~~~~~l~~i~~~ 125 (334)
.+++..++.+....+.+ .-.+.+++++..++
T Consensus 81 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 113 (257)
T 3imf_A 81 FGRIDILINNAAGNFICPAEDLSVNGWNSVINI 113 (257)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 44677555443332222 23466666666653
No 297
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=60.81 E-value=55 Score=26.22 Aligned_cols=101 Identities=12% Similarity=0.104 Sum_probs=51.0
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCC-hhhhhhh--c-cCcEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPG-FDRDIRF--R-TGVELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~-~~~~~~~--~-~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
.+++.+|++.++- .+...|.+.|.+|++..-.-.. ....... . .|.++..+..+ --|.+.++++++....
T Consensus 5 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D-----~~~~~~v~~~~~~~~~ 79 (260)
T 1x1t_A 5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGAD-----LSKGEAVRGLVDNAVR 79 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCC-----TTSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECC-----CCCHHHHHHHHHHHHH
Confidence 4566667666764 4445566788877776433222 2221110 1 14455555542 2356677777665444
Q ss_pred cCCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 94 RGVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 94 ~~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
..+++..++.+....+.+. -.+.+++++..+
T Consensus 80 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 112 (260)
T 1x1t_A 80 QMGRIDILVNNAGIQHTALIEDFPTEKWDAILA 112 (260)
T ss_dssp HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 3346775554433322221 245566665554
No 298
>1jr2_A Uroporphyrinogen-III synthase; heme biosynthesis, HEAM biosynthesis, lyase; 1.84A {Homo sapiens} SCOP: c.113.1.1
Probab=60.57 E-value=11 Score=31.10 Aligned_cols=84 Identities=13% Similarity=0.119 Sum_probs=48.6
Q ss_pred EEEecCcHHHHHHHHHHhcCCCCeEEecCCCC--CChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 20 IVLTAGATPAVEILCFCLADHGNALLVPSPYY--PGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 20 i~~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~--~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
++...+.++++...+.....+|.+|+++.+.- ....+.++ ..|+++..+++........+.+.+.+.+++. ..
T Consensus 136 ~~p~~~~ae~L~~~l~~~~~~g~~vLi~rg~~~r~~L~~~L~-~~G~~v~~~~~Y~~~~~~~~~~~~~~~l~~~----~~ 210 (286)
T 1jr2_A 136 EGETCGNAEKLAEYICSRESSALPLLFPCGNLKREILPKALK-DKGIAMESITVYQTVAHPGIQGNLNSYYSQQ----GV 210 (286)
T ss_dssp SCCSCSSHHHHHHHHHTSCCCSSCEEEEESCGGGCCHHHHHH-TTTCCEEEEECEEEEECTTHHHHHHHHHHHH----CS
T ss_pred CCCCccCHHHHHHHHHhcccCCCeEEEECChhhHHHHHHHHH-HCCCeeEEEEEEEEeeCCCcHHHHHHHHHhC----CC
Confidence 34445667777666654444678899886543 33555566 6889888888632111011223555555431 25
Q ss_pred eeEEEEeCCCC
Q 019899 98 VRGILICNPAN 108 (334)
Q Consensus 98 ~~~i~~~~p~n 108 (334)
+.+|++++|+.
T Consensus 211 ~d~v~ftS~~~ 221 (286)
T 1jr2_A 211 PASITFFSPSG 221 (286)
T ss_dssp CSEEEESSHHH
T ss_pred CCEEEEEChHH
Confidence 67777776643
No 299
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=60.28 E-value=22 Score=29.03 Aligned_cols=98 Identities=12% Similarity=0.196 Sum_probs=50.5
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCC-------CCC--h---h---hhhhhccCcEEEEEeCCCCCCccccHH
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPY-------YPG--F---D---RDIRFRTGVELIPVHCRSTDNFAFSIT 82 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~-------~~~--~---~---~~~~~~~g~~v~~v~~~~~~~~~~~~~ 82 (334)
.+++.+|++.++- .+...|.+.|.+|++..-. |.. . . ..+. ..+.++..+.++ --|.+
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D-----~~~~~ 87 (278)
T 3sx2_A 14 KVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE-DIGSRIVARQAD-----VRDRE 87 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHH-HHTCCEEEEECC-----TTCHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHH-hcCCeEEEEeCC-----CCCHH
Confidence 4566666666664 4455566788777765322 110 1 1 1112 234556666542 23567
Q ss_pred HHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHH
Q 019899 83 ALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLD 124 (334)
Q Consensus 83 ~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~ 124 (334)
+++++++......+++..++.+....+.+. +.+++++..+
T Consensus 88 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~--~~~~~~~~~~ 127 (278)
T 3sx2_A 88 SLSAALQAGLDELGRLDIVVANAGIAPMSA--GDDGWHDVID 127 (278)
T ss_dssp HHHHHHHHHHHHHCCCCEEEECCCCCCCSS--THHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCC--CHHHHHHHHH
Confidence 777777665444447785554443333222 4555665554
No 300
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=60.26 E-value=62 Score=26.58 Aligned_cols=100 Identities=12% Similarity=0.135 Sum_probs=53.3
Q ss_pred cEEEecCcHHHHHH-HHHHhcCCCCeEEecCCCCCChh----hhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 19 QIVLTAGATPAVEI-LCFCLADHGNALLVPSPYYPGFD----RDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 19 ~i~~~~g~~~~~~~-~~~~l~~~gd~vl~~~p~~~~~~----~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
.+++.+|++.++-. +...|.+.|.+|++..-.-.... ...+ ..|.++..+..+ --|.+++++++++...
T Consensus 48 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~ 121 (291)
T 3ijr_A 48 KNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVE-KEGVKCVLLPGD-----LSDEQHCKDIVQETVR 121 (291)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH-TTTCCEEEEESC-----TTSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH-hcCCcEEEEECC-----CCCHHHHHHHHHHHHH
Confidence 46666676667744 45556678877776543322111 1122 345566666642 2356777777766554
Q ss_pred cCCceeEEEEeCCCC-Cccc--CCCHHHHHHHHH
Q 019899 94 RGVKVRGILICNPAN-PVGN--IIPRETLYELLD 124 (334)
Q Consensus 94 ~~~~~~~i~~~~p~n-ptG~--~~~~~~l~~i~~ 124 (334)
+.+++..++.+.... +.+. -.+.++++++.+
T Consensus 122 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 155 (291)
T 3ijr_A 122 QLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFR 155 (291)
T ss_dssp HHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHH
Confidence 445677554443322 2221 236666666665
No 301
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=59.91 E-value=10 Score=31.65 Aligned_cols=48 Identities=19% Similarity=0.354 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEecccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYG 140 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~ 140 (334)
.+.++++++. +++.+++... | ++.++.+++.+.|+++++.++-.++.+
T Consensus 84 ~~~v~ea~~~------Gi~~vVi~t~----G--~~~~~~~~l~~~A~~~gi~viGPNc~G 131 (294)
T 2yv1_A 84 KDAVFEAIDA------GIELIVVITE----H--IPVHDTMEFVNYAEDVGVKIIGPNTPG 131 (294)
T ss_dssp HHHHHHHHHT------TCSEEEECCS----C--CCHHHHHHHHHHHHHHTCEEECSSCCE
T ss_pred HHHHHHHHHC------CCCEEEEECC----C--CCHHHHHHHHHHHHHcCCEEEcCCCce
Confidence 4455555554 6775554322 3 356778999999999999988666543
No 302
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=59.69 E-value=48 Score=30.46 Aligned_cols=79 Identities=14% Similarity=0.080 Sum_probs=53.1
Q ss_pred CCCCeEEecCCCCCChhh-------hhhhccCcEEEEEeCC-CCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCc
Q 019899 39 DHGNALLVPSPYYPGFDR-------DIRFRTGVELIPVHCR-STDNFAFSITALDQAFNQARKRGVKVRGILICNPANPV 110 (334)
Q Consensus 39 ~~gd~vl~~~p~~~~~~~-------~~~~~~g~~v~~v~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~npt 110 (334)
+++|.|++.....++... ... ..|++++..... -.-..+-|.++|.+.++.. +++.++.++...
T Consensus 337 ~~~~~vi~s~~~~~G~~~~~~~~~~~l~-~~g~~v~~~~~~~i~~SgHa~~~eL~~~i~~~-----~Pk~vipvHGe~-- 408 (562)
T 3bk2_A 337 KPGDTVILSSSPIPGNEEAVNRVINRLY-ALGAYVLYPPTYKVHASGHASQEELKLILNLT-----TPRFFLPWHGEV-- 408 (562)
T ss_dssp CTTCEEEECSCCCTTCHHHHHHHHHHHH-HTTCEEECTTTSSSCCCSSCCHHHHHHHHHHH-----CCSEEEEESBCH--
T ss_pred CCCCEEEEECCCCCCCeEehhhhcCcee-eCCCEEEEccCCceEEeCCCCHHHHHHHHHhc-----CCCEEEEEcCCH--
Confidence 688999999877776532 222 468887754210 0122367899999999886 788888887642
Q ss_pred ccCCCHHHHHHHHHHHHhcCc
Q 019899 111 GNIIPRETLYELLDFAREKNI 131 (334)
Q Consensus 111 G~~~~~~~l~~i~~~~~~~~~ 131 (334)
..+.+..+++++.|+
T Consensus 409 ------~~~~~~~~~~~~~g~ 423 (562)
T 3bk2_A 409 ------RHQMNFKWLAESMSR 423 (562)
T ss_dssp ------HHHHHHHHHHHTSSS
T ss_pred ------HHHHHHHHHHHHcCC
Confidence 236777778877765
No 303
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=59.51 E-value=29 Score=25.90 Aligned_cols=54 Identities=17% Similarity=0.063 Sum_probs=39.1
Q ss_pred ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcC
Q 019899 61 RTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKN 130 (334)
Q Consensus 61 ~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~ 130 (334)
..|.+++.... ..+++++.+++.+. ++.+|.++....+ ..+.++++++.+++.+
T Consensus 44 ~~G~eVi~lG~------~~p~e~lv~aa~~~-----~~diV~lS~~~~~-----~~~~~~~~i~~L~~~g 97 (161)
T 2yxb_A 44 DAGFEVVYTGL------RQTPEQVAMAAVQE-----DVDVIGVSILNGA-----HLHLMKRLMAKLRELG 97 (161)
T ss_dssp HTTCEEECCCS------BCCHHHHHHHHHHT-----TCSEEEEEESSSC-----HHHHHHHHHHHHHHTT
T ss_pred HCCCEEEECCC------CCCHHHHHHHHHhc-----CCCEEEEEeechh-----hHHHHHHHHHHHHhcC
Confidence 57999988764 35788898888874 8887777765442 3456888888877754
No 304
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=59.32 E-value=31 Score=28.18 Aligned_cols=101 Identities=12% Similarity=0.118 Sum_probs=52.1
Q ss_pred CcEEEecCcHHHHH-HHHHHhcCCCCeEEecCCC--------CC--C------hhhhhhhccCcEEEEEeCCCCCCcccc
Q 019899 18 SQIVLTAGATPAVE-ILCFCLADHGNALLVPSPY--------YP--G------FDRDIRFRTGVELIPVHCRSTDNFAFS 80 (334)
Q Consensus 18 ~~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~--------~~--~------~~~~~~~~~g~~v~~v~~~~~~~~~~~ 80 (334)
+.+++.+|++.++- .+...|.+.|.+|++..-. |. . ....+. ..|.++..+.++ --|
T Consensus 15 gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D-----v~~ 88 (280)
T 3pgx_A 15 GRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVE-DQGRKALTRVLD-----VRD 88 (280)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHH-TTTCCEEEEECC-----TTC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHH-hcCCeEEEEEcC-----CCC
Confidence 34566666666664 4455566788877765321 11 0 111122 235556655542 235
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
.+++++.++......+++..++.+......+. -.+.+++++..+
T Consensus 89 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 134 (280)
T 3pgx_A 89 DAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIG 134 (280)
T ss_dssp HHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHh
Confidence 66777777665444346775554433333332 246666666555
No 305
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=59.07 E-value=17 Score=30.22 Aligned_cols=48 Identities=15% Similarity=0.211 Sum_probs=33.0
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIY 139 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~ 139 (334)
-.+.++++++. +++++++..+ | ++.++.+++.+.|+++|+.++-..+.
T Consensus 77 ~~~~~~ea~~~------Gi~~iVi~t~----G--~~~~~~~~l~~~A~~~gv~liGPNc~ 124 (288)
T 2nu8_A 77 CKDSILEAIDA------GIKLIITITE----G--IPTLDMLTVKVKLDEAGVRMIGPNTP 124 (288)
T ss_dssp HHHHHHHHHHT------TCSEEEECCC----C--CCHHHHHHHHHHHHHHTCEEECSSCC
T ss_pred HHHHHHHHHHC------CCCEEEEECC----C--CCHHHHHHHHHHHHHcCCEEEecCCc
Confidence 45666666665 6675554333 3 35677889999999999998855543
No 306
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=58.96 E-value=42 Score=27.10 Aligned_cols=102 Identities=13% Similarity=0.038 Sum_probs=52.1
Q ss_pred CcEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhh---hccCcEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 18 SQIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIR---FRTGVELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 18 ~~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~---~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
+.+++.+|++.++- .+...|.+.|.+|++..-.-........ ...+.++..+.++- -|.++++++++....
T Consensus 20 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~ 94 (266)
T 4egf_A 20 GKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDL-----AEPDAPAELARRAAE 94 (266)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-----TSTTHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecC-----CCHHHHHHHHHHHHH
Confidence 35666777777774 4455566788777776543222222221 01355565555421 234555555554443
Q ss_pred cCCceeEEEEeCCCCCcc--cCCCHHHHHHHHH
Q 019899 94 RGVKVRGILICNPANPVG--NIIPRETLYELLD 124 (334)
Q Consensus 94 ~~~~~~~i~~~~p~nptG--~~~~~~~l~~i~~ 124 (334)
+.+++..++.+......+ .-.+.+++++..+
T Consensus 95 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 127 (266)
T 4egf_A 95 AFGGLDVLVNNAGISHPQPVVDTDPQLFDATIA 127 (266)
T ss_dssp HHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 334678555554433222 2345666666555
No 307
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=58.57 E-value=76 Score=26.11 Aligned_cols=102 Identities=17% Similarity=0.110 Sum_probs=54.6
Q ss_pred CcEEEecCcHHHHHH-HHHHhcCCCCeEEecCCCCCChhhhhhh--ccC-cEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 18 SQIVLTAGATPAVEI-LCFCLADHGNALLVPSPYYPGFDRDIRF--RTG-VELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~-~~~~l~~~gd~vl~~~p~~~~~~~~~~~--~~g-~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
+.+++.+|++.++-. +...|.+.|.+|++..-.-......... ..+ .++..+.++ --|.+.++++++....
T Consensus 41 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~ 115 (293)
T 3rih_A 41 ARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLD-----VSDPGSCADAARTVVD 115 (293)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECC-----TTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEe-----CCCHHHHHHHHHHHHH
Confidence 356667777767744 4555667887777765433333222221 122 345555542 2356777777666544
Q ss_pred cCCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 94 RGVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 94 ~~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
..+++..++.+....+.+. -.+.+++++..+
T Consensus 116 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 148 (293)
T 3rih_A 116 AFGALDVVCANAGIFPEARLDTMTPEQLSEVLD 148 (293)
T ss_dssp HHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 4456775554433333333 346666766665
No 308
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=58.53 E-value=50 Score=26.57 Aligned_cols=100 Identities=10% Similarity=0.004 Sum_probs=49.0
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
..++.+|++.++- .+...|.+.|.+|++..-.-.......+ ..+..+..+..+ --|.+.++++++.....-++
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~ 81 (260)
T 1nff_A 8 KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAA-ELADAARYVHLD-----VTQPAQWKAAVDTAVTAFGG 81 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HTGGGEEEEECC-----TTCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HhhcCceEEEec-----CCCHHHHHHHHHHHHHHcCC
Confidence 4555666666664 4445566778787765432111222222 222224444431 12566777777655443346
Q ss_pred eeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 98 VRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 98 ~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
+..++.+......+. -.+.+++++..+
T Consensus 82 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 110 (260)
T 1nff_A 82 LHVLVNNAGILNIGTIEDYALTEWQRILD 110 (260)
T ss_dssp CCEEEECCCCCCCBCTTTSCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 775554443333232 245556655554
No 309
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=58.05 E-value=19 Score=26.17 Aligned_cols=21 Identities=24% Similarity=0.224 Sum_probs=17.5
Q ss_pred HHHHHHHHhcCcEEEEecccc
Q 019899 120 YELLDFAREKNIHVISDEIYG 140 (334)
Q Consensus 120 ~~i~~~~~~~~~~vi~D~~~~ 140 (334)
+++.++|+++|+.++-+.+.+
T Consensus 107 ~~~~~~a~~~Gir~vgpnc~g 127 (140)
T 1iuk_A 107 PEFEKALKEAGIPVVADRCLM 127 (140)
T ss_dssp HHHHHHHHHTTCCEEESCCHH
T ss_pred HHHHHHHHHcCCEEEcCCccc
Confidence 778888999999999887643
No 310
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=58.04 E-value=31 Score=28.85 Aligned_cols=101 Identities=13% Similarity=0.191 Sum_probs=52.8
Q ss_pred CcEEEecCcHHHHH-HHHHHhcCCCCeEEecCCC-------CCC--h---h---hhhhhccCcEEEEEeCCCCCCccccH
Q 019899 18 SQIVLTAGATPAVE-ILCFCLADHGNALLVPSPY-------YPG--F---D---RDIRFRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 18 ~~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~-------~~~--~---~---~~~~~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
+.+++.+|++.++- .+...|.+.|.+|++..-. +.. . . ..+. ..|.++..+.++ --|.
T Consensus 46 gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D-----v~d~ 119 (317)
T 3oec_A 46 GKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVE-EQGRRIIARQAD-----VRDL 119 (317)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHH-HTTCCEEEEECC-----TTCH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHH-hcCCeEEEEECC-----CCCH
Confidence 35677777777774 4455566788777765322 110 1 1 1112 235556666542 1356
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
++++++++......+++.+++.+....+.+. -.+.++++++.+
T Consensus 120 ~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~ 164 (317)
T 3oec_A 120 ASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQ 164 (317)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 7777777665444447775544433333332 345566666655
No 311
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=57.86 E-value=35 Score=27.20 Aligned_cols=100 Identities=11% Similarity=0.154 Sum_probs=53.0
Q ss_pred cEEEecCcHHHHHH-HHHHhcCCCCeEEecCCCC-CChh---hhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 19 QIVLTAGATPAVEI-LCFCLADHGNALLVPSPYY-PGFD---RDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 19 ~i~~~~g~~~~~~~-~~~~l~~~gd~vl~~~p~~-~~~~---~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
..++.+|++.++-. +...|.+.|.+|++..-.. .... ..+. ..|.++..+..+ --|.+++++++++...
T Consensus 5 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~ 78 (246)
T 3osu_A 5 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIK-AKGVDSFAIQAN-----VADADEVKAMIKEVVS 78 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH-HTTSCEEEEECC-----TTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH-hcCCcEEEEEcc-----CCCHHHHHHHHHHHHH
Confidence 45666676667644 4455667888876643221 1111 1222 245566666542 2356777777766554
Q ss_pred cCCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 94 RGVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 94 ~~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
+.+++..++.+....+.+. -.+.+++++..+
T Consensus 79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (246)
T 3osu_A 79 QFGSLDVLVNNAGITRDNLLMRMKEQEWDDVID 111 (246)
T ss_dssp HHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 4457785554443333222 346666666655
No 312
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=57.84 E-value=36 Score=27.52 Aligned_cols=100 Identities=16% Similarity=0.160 Sum_probs=48.5
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
.+++.+|++.++- .+...|.+.|.+|++..-.-.......+ ..+.++..+.++ --|.++++++++......++
T Consensus 7 k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~ 80 (263)
T 2a4k_A 7 KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVA-ALEAEAIAVVAD-----VSDPKAVEAVFAEALEEFGR 80 (263)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TCCSSEEEEECC-----TTSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HhcCceEEEEcC-----CCCHHHHHHHHHHHHHHcCC
Confidence 4555556666663 4455566778777765433222222222 233344444432 12567777776655443346
Q ss_pred eeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 98 VRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 98 ~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
+.+++.+....+.+. -.+.++++++.+
T Consensus 81 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 109 (263)
T 2a4k_A 81 LHGVAHFAGVAHSALSWNLPLEAWEKVLR 109 (263)
T ss_dssp CCEEEEGGGGTTTTC----CHHHHHHHHH
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 775554433222222 234455555444
No 313
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=57.35 E-value=72 Score=25.45 Aligned_cols=100 Identities=11% Similarity=0.020 Sum_probs=55.0
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhh--ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcC
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRF--RTGVELIPVHCRSTDNFAFSITALDQAFNQARKRG 95 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~--~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~ 95 (334)
.+++.+|++.++- .+...|.+.|.+|++..-.-......... ..|.++..+.++ --|.++++++++.....
T Consensus 8 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~- 81 (252)
T 3h7a_A 8 ATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLD-----ARNEDEVTAFLNAADAH- 81 (252)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECC-----TTCHHHHHHHHHHHHHH-
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECc-----CCCHHHHHHHHHHHHhh-
Confidence 4555566666664 44555667888877765433332222220 235566666652 23567777777766555
Q ss_pred CceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 96 VKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 96 ~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
+++..++.+......+. -.+.+++++..+
T Consensus 82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 112 (252)
T 3h7a_A 82 APLEVTIFNVGANVNFPILETTDRVFRKVWE 112 (252)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCceEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 57885554444333222 346566666554
No 314
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=57.05 E-value=51 Score=27.50 Aligned_cols=59 Identities=12% Similarity=0.062 Sum_probs=41.6
Q ss_pred CCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc---CcEEEE
Q 019899 74 TDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK---NIHVIS 135 (334)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~vi~ 135 (334)
+++..+|.+.+++.++..... ++..++++ .++--+..++.+|..++++.+.+. +++||+
T Consensus 25 ~~dg~iD~~~l~~lv~~li~~--Gv~gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVia 86 (301)
T 1xky_A 25 DINGNIDFAKTTKLVNYLIDN--GTTAIVVG-GTTGESPTLTSEEKVALYRHVVSVVDKRVPVIA 86 (301)
T ss_dssp CTTSSBCHHHHHHHHHHHHHT--TCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCceEEe
Confidence 345689999999998876554 45555544 444456678999999999887653 577764
No 315
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=56.92 E-value=78 Score=25.70 Aligned_cols=101 Identities=13% Similarity=0.045 Sum_probs=51.7
Q ss_pred CcEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhh--ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 18 SQIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRF--RTGVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 18 ~~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~--~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
+.+++.+|++.++- .+...|.+.|.+|++..-.-......... ..|.++..+..+- -|.+.++++++.....
T Consensus 33 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~~~~~~~~~~~~ 107 (275)
T 4imr_A 33 GRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDL-----SEAGAGTDLIERAEAI 107 (275)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCT-----TSTTHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecC-----CCHHHHHHHHHHHHHh
Confidence 35666677766774 44555667888877764433322222220 2355565555421 2345555555544433
Q ss_pred CCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 95 GVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 95 ~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
+++..++.+....+.+. -.+.+++++..+
T Consensus 108 -g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 138 (275)
T 4imr_A 108 -APVDILVINASAQINATLSALTPNDLAFQLA 138 (275)
T ss_dssp -SCCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 46775554433332222 246666666655
No 316
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=56.81 E-value=45 Score=25.92 Aligned_cols=60 Identities=8% Similarity=0.043 Sum_probs=43.0
Q ss_pred ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcC----cEEEEe
Q 019899 61 RTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKN----IHVISD 136 (334)
Q Consensus 61 ~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~----~~vi~D 136 (334)
..|.+++.+.. ....+++.+++++. ++.+|.++.-..+ +.+.++++++.+++.+ +.|++=
T Consensus 114 ~~G~~v~~LG~------~vp~~~l~~~~~~~-----~~d~v~lS~~~~~-----~~~~~~~~i~~l~~~~~~~~~~v~vG 177 (210)
T 1y80_A 114 SGGFTVYNLGV------DIEPGKFVEAVKKY-----QPDIVGMSALLTT-----TMMNMKSTIDALIAAGLRDRVKVIVG 177 (210)
T ss_dssp HTTCEEEECCS------SBCHHHHHHHHHHH-----CCSEEEEECCSGG-----GTHHHHHHHHHHHHTTCGGGCEEEEE
T ss_pred HCCCEEEECCC------CCCHHHHHHHHHHc-----CCCEEEEeccccc-----cHHHHHHHHHHHHhcCCCCCCeEEEE
Confidence 57999988774 46789999988876 8887777754332 2456888888887754 666654
No 317
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=56.60 E-value=51 Score=26.66 Aligned_cols=98 Identities=13% Similarity=0.139 Sum_probs=49.9
Q ss_pred CcEEEecCcHHHHHHH-HHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCC
Q 019899 18 SQIVLTAGATPAVEIL-CFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGV 96 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~-~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~ 96 (334)
..+++.+|++.++-.. ...|.+.|.+|++..-.- ..++......+..+.++ --|.++++++++......+
T Consensus 16 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~~~g 86 (266)
T 3p19_A 16 KKLVVITGASSGIGEAIARRFSEEGHPLLLLARRV----ERLKALNLPNTLCAQVD-----VTDKYTFDTAITRAEKIYG 86 (266)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCH----HHHHTTCCTTEEEEECC-----TTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH----HHHHHhhcCCceEEEec-----CCCHHHHHHHHHHHHHHCC
Confidence 3466666666677444 455667787777654321 11121222233333331 2356777777766554445
Q ss_pred ceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 97 KVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 97 ~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
++..++.+....+.+. -.+.++++++.+
T Consensus 87 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 116 (266)
T 3p19_A 87 PADAIVNNAGMMLLGQIDTQEANEWQRMFD 116 (266)
T ss_dssp SEEEEEECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 7785554444333332 345566666555
No 318
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=56.47 E-value=17 Score=30.28 Aligned_cols=48 Identities=17% Similarity=0.201 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEecccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYG 140 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~ 140 (334)
.+.++++++. +++.+++.+. | ++.++.+++.+.++++++.++-..+.+
T Consensus 78 ~~~~~ea~~~------Gi~~vVi~t~----G--~~~~~~~~l~~~a~~~gi~vigPNc~G 125 (288)
T 1oi7_A 78 ADAALEAAHA------GIPLIVLITE----G--IPTLDMVRAVEEIKALGSRLIGGNCPG 125 (288)
T ss_dssp HHHHHHHHHT------TCSEEEECCS----C--CCHHHHHHHHHHHHHHTCEEEESSSCE
T ss_pred HHHHHHHHHC------CCCEEEEECC----C--CCHHHHHHHHHHHHHcCCEEEeCCCCe
Confidence 4444455543 5675555432 3 356778899999999999999777643
No 319
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=56.42 E-value=28 Score=30.79 Aligned_cols=27 Identities=15% Similarity=0.210 Sum_probs=24.4
Q ss_pred CHHHHHHHHHHHHhcCcEEEEeccccc
Q 019899 115 PRETLYELLDFAREKNIHVISDEIYGG 141 (334)
Q Consensus 115 ~~~~l~~i~~~~~~~~~~vi~D~~~~~ 141 (334)
+.++++++++.|+++|+.||+|-++.-
T Consensus 68 t~~df~~lv~~aH~~Gi~VilD~V~NH 94 (441)
T 1lwj_A 68 SEREFKEMIEAFHDSGIKVVLDLPIHH 94 (441)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECTTB
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeCCCc
Confidence 578999999999999999999998643
No 320
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=56.41 E-value=87 Score=26.08 Aligned_cols=59 Identities=12% Similarity=0.197 Sum_probs=42.5
Q ss_pred CCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc---CcEEEE
Q 019899 74 TDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK---NIHVIS 135 (334)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~vi~ 135 (334)
+++..+|.+.+++.++..... ++..++++ .++--+..++.+|.+++++.+.+. +++||+
T Consensus 24 ~~dg~iD~~~l~~lv~~li~~--Gv~Gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVia 85 (303)
T 2wkj_A 24 DQQQALDKASLRRLVQFNIQQ--GIDGLYVG-GSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIA 85 (303)
T ss_dssp CTTSSBCHHHHHHHHHHHHHT--TCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCCcCHHHHHHHHHHHHHc--CCCEEEEC-eeccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 345689999999998876554 45555554 444456678999999999987653 678876
No 321
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=56.26 E-value=50 Score=26.77 Aligned_cols=101 Identities=14% Similarity=0.131 Sum_probs=52.9
Q ss_pred CcEEEecCcHHHHHH-HHHHhcCCCCeEEecCCCCCChhhh---hhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 18 SQIVLTAGATPAVEI-LCFCLADHGNALLVPSPYYPGFDRD---IRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~-~~~~l~~~gd~vl~~~p~~~~~~~~---~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
+.+++.+|++.++-. +...|.+.|.+|++..-.-...... +. ..|.++..+.++ --|.++++++++....
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~ 101 (270)
T 3ftp_A 28 KQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFK-QAGLEGRGAVLN-----VNDATAVDALVESTLK 101 (270)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH-HHTCCCEEEECC-----TTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH-hcCCcEEEEEEe-----CCCHHHHHHHHHHHHH
Confidence 356777777777744 4455667888877665332222221 22 234444444431 1356677777665544
Q ss_pred cCCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 94 RGVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 94 ~~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
..+++..++.+......+. -.+.+++++..+
T Consensus 102 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 134 (270)
T 3ftp_A 102 EFGALNVLVNNAGITQDQLAMRMKDDEWDAVID 134 (270)
T ss_dssp HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 4346775554433333332 346666666655
No 322
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=56.13 E-value=21 Score=20.35 Aligned_cols=28 Identities=18% Similarity=0.106 Sum_probs=23.5
Q ss_pred eEEEEecCCCcccHHHHHHHHHHHHHHc
Q 019899 306 WFRCCFTSLTHEDIPLVIERIQKVAETC 333 (334)
Q Consensus 306 ~iRi~~~~~~~~~l~~~l~~l~~~~~~~ 333 (334)
.+|+|+...+..+.+++...|-+++.++
T Consensus 3 rvrisitartkkeaekfaailikvfael 30 (62)
T 2gjh_A 3 RVRISITARTKKEAEKFAAILIKVFAEL 30 (62)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEEecchhHHHHHHHHHHHHHHHh
Confidence 5899998778899999999988887664
No 323
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=55.98 E-value=33 Score=28.04 Aligned_cols=80 Identities=13% Similarity=0.062 Sum_probs=44.3
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
.+++.+|++.++- .+...|.+.|.+|++..-.-........ ..+.++..+.++ --|.++++++++......++
T Consensus 6 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~ 79 (281)
T 3zv4_A 6 EVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEV-AHGGNAVGVVGD-----VRSLQDQKRAAERCLAAFGK 79 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HTBTTEEEEECC-----TTCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHH-HcCCcEEEEEcC-----CCCHHHHHHHHHHHHHhcCC
Confidence 4556666666664 4455566788888776543333333333 345556555542 23567777777665444346
Q ss_pred eeEEEEe
Q 019899 98 VRGILIC 104 (334)
Q Consensus 98 ~~~i~~~ 104 (334)
+..++.+
T Consensus 80 iD~lvnn 86 (281)
T 3zv4_A 80 IDTLIPN 86 (281)
T ss_dssp CCEEECC
T ss_pred CCEEEEC
Confidence 7744433
No 324
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=55.67 E-value=55 Score=26.37 Aligned_cols=101 Identities=12% Similarity=0.149 Sum_probs=50.0
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhh--cc--CcEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRF--RT--GVELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~--~~--g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
.+++.+|++.++- .+...|.+.|.+|++..-.-.......+. .. +.++..+.++ --|.+.++++++....
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D-----~~~~~~v~~~~~~~~~ 88 (267)
T 1iy8_A 14 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVAD-----VSDEAQVEAYVTATTE 88 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECC-----TTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEcc-----CCCHHHHHHHHHHHHH
Confidence 4556666666664 44555667787777654321111111110 11 4455555542 1256777777765544
Q ss_pred cCCceeEEEEeCCCCCc-cc--CCCHHHHHHHHH
Q 019899 94 RGVKVRGILICNPANPV-GN--IIPRETLYELLD 124 (334)
Q Consensus 94 ~~~~~~~i~~~~p~npt-G~--~~~~~~l~~i~~ 124 (334)
..+++..++.+....+. +. -.+.+++++..+
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 122 (267)
T 1iy8_A 89 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVS 122 (267)
T ss_dssp HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHH
T ss_pred HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHH
Confidence 33467755544332222 21 235566666554
No 325
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=55.23 E-value=55 Score=27.47 Aligned_cols=100 Identities=19% Similarity=0.205 Sum_probs=51.4
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCC--CCCh---h---hhhhhccCcEEEEEeCCCCCCccccHHHHHHHHH
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPY--YPGF---D---RDIRFRTGVELIPVHCRSTDNFAFSITALDQAFN 89 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~--~~~~---~---~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~ 89 (334)
.+++.+|++.++- .+...|.+.|.+|+...-. -... . ..+. ..+.++..+.++ --|.+.++++++
T Consensus 6 k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~-~~~~~~~~~~~D-----vtd~~~v~~~~~ 79 (324)
T 3u9l_A 6 KIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFAR-DNDVDLRTLELD-----VQSQVSVDRAID 79 (324)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHH-HHTCCEEEEECC-----TTCHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHH-hcCCcEEEEEee-----cCCHHHHHHHHH
Confidence 4666667666774 4455667789888764321 1111 1 1111 234455555542 125677777776
Q ss_pred HHHHcCCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 90 QARKRGVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 90 ~~~~~~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
......+++..++.+......|. -.+.++++++.+
T Consensus 80 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~ 116 (324)
T 3u9l_A 80 QIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYD 116 (324)
T ss_dssp HHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHH
T ss_pred HHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 65444447775544433332222 336566665554
No 326
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=55.13 E-value=26 Score=31.06 Aligned_cols=26 Identities=27% Similarity=0.349 Sum_probs=23.6
Q ss_pred CHHHHHHHHHHHHhcCcEEEEecccc
Q 019899 115 PRETLYELLDFAREKNIHVISDEIYG 140 (334)
Q Consensus 115 ~~~~l~~i~~~~~~~~~~vi~D~~~~ 140 (334)
+.++++++++.|+++|+.||+|-++.
T Consensus 82 t~~~~~~lv~~~h~~Gi~vi~D~V~N 107 (449)
T 3dhu_A 82 TLADFKALTDRAHELGMKVMLDIVYN 107 (449)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 56899999999999999999998864
No 327
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=54.98 E-value=32 Score=29.24 Aligned_cols=37 Identities=14% Similarity=0.102 Sum_probs=31.4
Q ss_pred CCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccc
Q 019899 107 ANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSI 143 (334)
Q Consensus 107 ~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~ 143 (334)
.+|.+-..+.++..++++.|+++|+.|++|--|++.+
T Consensus 50 v~P~~g~~d~~~~~~~~~~ak~~Gl~v~ld~hysd~w 86 (334)
T 1fob_A 50 VNPSDGSYDLDYNLELAKRVKAAGMSLYLDLHLSDTW 86 (334)
T ss_dssp SCCTTCTTCHHHHHHHHHHHHHTTCEEEEEECCSSSC
T ss_pred ECCCCCccCHHHHHHHHHHHHHCCCEEEEEeccCCCC
Confidence 5677788999999999999999999999997776543
No 328
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=54.95 E-value=68 Score=25.67 Aligned_cols=101 Identities=15% Similarity=0.191 Sum_probs=54.0
Q ss_pred CcEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhh---hhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 18 SQIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRD---IRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 18 ~~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~---~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
+.+++.+|++.++- .+...|.+.|.+|++..-.-...... +. ..|.++..+.++ --|.+.++++++....
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~ 85 (256)
T 3gaf_A 12 DAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIR-QAGGKAIGLECN-----VTDEQHREAVIKAALD 85 (256)
T ss_dssp TCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHH-HTTCCEEEEECC-----TTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH-hcCCcEEEEECC-----CCCHHHHHHHHHHHHH
Confidence 35666666666764 44455667787777764332222221 22 235566666542 2356777777666544
Q ss_pred cCCceeEEEEeCCCC-CcccCCCHHHHHHHHH
Q 019899 94 RGVKVRGILICNPAN-PVGNIIPRETLYELLD 124 (334)
Q Consensus 94 ~~~~~~~i~~~~p~n-ptG~~~~~~~l~~i~~ 124 (334)
+.+++..++.+.... +...-.+.+++++..+
T Consensus 86 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 117 (256)
T 3gaf_A 86 QFGKITVLVNNAGGGGPKPFDMPMSDFEWAFK 117 (256)
T ss_dssp HHSCCCEEEECCCCCCCCCTTCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCCCCCHHHHHHHHH
Confidence 444778555444332 2222456666666654
No 329
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=54.78 E-value=14 Score=30.99 Aligned_cols=48 Identities=15% Similarity=0.270 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc-CcEEEEecccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK-NIHVISDEIYG 140 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~-~~~vi~D~~~~ 140 (334)
.+.++++++. +++.+++.++. ++.++.+++.+.|+++ |+.++-+.+.+
T Consensus 85 ~~~~~e~i~~------Gi~~iv~~t~G------~~~~~~~~l~~~a~~~~gi~liGPnc~G 133 (305)
T 2fp4_A 85 AAAINEAIDA------EVPLVVCITEG------IPQQDMVRVKHRLLRQGKTRLIGPNCPG 133 (305)
T ss_dssp HHHHHHHHHT------TCSEEEECCCC------CCHHHHHHHHHHHTTCSSCEEECSSSCE
T ss_pred HHHHHHHHHC------CCCEEEEECCC------CChHHHHHHHHHHHhcCCcEEEeCCCCe
Confidence 3445555554 67776665553 2455677999999999 99999777654
No 330
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=54.47 E-value=49 Score=26.90 Aligned_cols=101 Identities=14% Similarity=0.146 Sum_probs=48.9
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhh--ccCc---EEEEEeCCCCCCccccHHHHHHHHHHHH
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRF--RTGV---ELIPVHCRSTDNFAFSITALDQAFNQAR 92 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~--~~g~---~v~~v~~~~~~~~~~~~~~l~~~l~~~~ 92 (334)
.+++.+|++.++- .+...|.+.|.+|++..-.-......... ..+. ++..+..+ --|.+.++++++...
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~~ 81 (280)
T 1xkq_A 7 KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVAD-----VTTEDGQDQIINSTL 81 (280)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECC-----TTSHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEec-----CCCHHHHHHHHHHHH
Confidence 4566666666664 44455667787777654322112111110 1222 44444432 125667777666544
Q ss_pred HcCCceeEEEEeCCCCCcc------cCCCHHHHHHHHH
Q 019899 93 KRGVKVRGILICNPANPVG------NIIPRETLYELLD 124 (334)
Q Consensus 93 ~~~~~~~~i~~~~p~nptG------~~~~~~~l~~i~~ 124 (334)
...+++..++.+......+ .-.+.+++++..+
T Consensus 82 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~ 119 (280)
T 1xkq_A 82 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLK 119 (280)
T ss_dssp HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHH
T ss_pred HhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHH
Confidence 4334677555443322222 1345555655554
No 331
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=54.45 E-value=64 Score=25.54 Aligned_cols=100 Identities=14% Similarity=0.154 Sum_probs=50.8
Q ss_pred cEEEecCcHHHHHH-HHHHhcCCCCeEEecCC-CCCChhhh---hhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 19 QIVLTAGATPAVEI-LCFCLADHGNALLVPSP-YYPGFDRD---IRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 19 ~i~~~~g~~~~~~~-~~~~l~~~gd~vl~~~p-~~~~~~~~---~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
..++.+|++.++-. +...|.+.|.+|++..- .-...... ++ ..+.++..+.++ --|.++++++++....
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D-----~~~~~~~~~~~~~~~~ 78 (246)
T 2uvd_A 5 KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIK-KLGSDAIAVRAD-----VANAEDVTNMVKQTVD 78 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH-HTTCCEEEEECC-----TTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH-hcCCcEEEEEcC-----CCCHHHHHHHHHHHHH
Confidence 45666676667643 44556677877776532 21111111 11 234455555542 1356777777765544
Q ss_pred cCCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 94 RGVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 94 ~~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
..+++..++.+....+.+. -.+.++++++.+
T Consensus 79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (246)
T 2uvd_A 79 VFGQVDILVNNAGVTKDNLLMRMKEEEWDTVIN 111 (246)
T ss_dssp HHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 3346775554433333222 245556666554
No 332
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=54.34 E-value=9.6 Score=34.16 Aligned_cols=27 Identities=4% Similarity=0.202 Sum_probs=24.4
Q ss_pred CHHHHHHHHHHHHhcCcEEEEeccccc
Q 019899 115 PRETLYELLDFAREKNIHVISDEIYGG 141 (334)
Q Consensus 115 ~~~~l~~i~~~~~~~~~~vi~D~~~~~ 141 (334)
+.++++++++-|+++||.||+|-++--
T Consensus 75 t~~df~~lv~~aH~~Gi~VilD~V~NH 101 (496)
T 4gqr_A 75 NEDEFRNMVTRCNNVGVRIYVDAVINH 101 (496)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCc
Confidence 678999999999999999999998643
No 333
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=54.29 E-value=53 Score=26.28 Aligned_cols=100 Identities=12% Similarity=0.107 Sum_probs=49.5
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCC--hhhh---hhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHH
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPG--FDRD---IRFRTGVELIPVHCRSTDNFAFSITALDQAFNQAR 92 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~--~~~~---~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~ 92 (334)
.+++.+|++.++- .+...|.+.|.+|++..-.-.. .... ++ ..+.++..+.++ --|.+.++++++...
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~D-----v~~~~~v~~~~~~~~ 76 (258)
T 3a28_C 3 KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIE-AADQKAVFVGLD-----VTDKANFDSAIDEAA 76 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHH-TTTCCEEEEECC-----TTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHH-hcCCcEEEEEcc-----CCCHHHHHHHHHHHH
Confidence 3556666666664 4444566678777765322111 1111 11 224455555542 125566776666544
Q ss_pred HcCCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 93 KRGVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 93 ~~~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
..-+++..++.+....+.+. -.+.++++++.+
T Consensus 77 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 110 (258)
T 3a28_C 77 EKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYS 110 (258)
T ss_dssp HHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 43346775554433322222 245566666554
No 334
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=54.17 E-value=69 Score=26.73 Aligned_cols=59 Identities=14% Similarity=0.144 Sum_probs=42.2
Q ss_pred CCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc---CcEEEE
Q 019899 74 TDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK---NIHVIS 135 (334)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~vi~ 135 (334)
+.+..+|.+.+++.++..... ++..++++ .++--+..++.+|.+++++.+.+. +++||+
T Consensus 28 ~~dg~iD~~~l~~lv~~li~~--Gv~gi~v~-GttGE~~~Lt~~Er~~v~~~~~~~~~grvpvia 89 (304)
T 3l21_A 28 SGDGSLDTATAARLANHLVDQ--GCDGLVVS-GTTGESPTTTDGEKIELLRAVLEAVGDRARVIA 89 (304)
T ss_dssp CTTSCBCHHHHHHHHHHHHHT--TCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCCcCHHHHHHHHHHHHHc--CCCEEEeC-ccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 345589999999998876554 45555444 444456778999999999887663 678876
No 335
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=54.09 E-value=50 Score=27.27 Aligned_cols=101 Identities=14% Similarity=0.157 Sum_probs=49.9
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhh--ccCc---EEEEEeCCCCCCccccHHHHHHHHHHHH
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRF--RTGV---ELIPVHCRSTDNFAFSITALDQAFNQAR 92 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~--~~g~---~v~~v~~~~~~~~~~~~~~l~~~l~~~~ 92 (334)
.+++.+|++.++- .+...|.+.|.+|++..-.-......... ..|. ++..+.++ --|.+.++++++...
T Consensus 27 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~D-----v~d~~~v~~~~~~~~ 101 (297)
T 1xhl_A 27 KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVAD-----VTEASGQDDIINTTL 101 (297)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECC-----TTSHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecC-----CCCHHHHHHHHHHHH
Confidence 4566667776774 44555667787777654322111111110 1222 44444432 125666777666544
Q ss_pred HcCCceeEEEEeCCCCCccc----CCCHHHHHHHHH
Q 019899 93 KRGVKVRGILICNPANPVGN----IIPRETLYELLD 124 (334)
Q Consensus 93 ~~~~~~~~i~~~~p~nptG~----~~~~~~l~~i~~ 124 (334)
...+++..++.+......+. -.+.+++++..+
T Consensus 102 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~ 137 (297)
T 1xhl_A 102 AKFGKIDILVNNAGANLADGTANTDQPVELYQKTFK 137 (297)
T ss_dssp HHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHH
T ss_pred HhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHh
Confidence 43346775554433322221 345566666554
No 336
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=53.96 E-value=76 Score=25.15 Aligned_cols=102 Identities=11% Similarity=0.068 Sum_probs=51.9
Q ss_pred CcEEEecCcHHHH-HHHHHHhcCCCCeEEecCCCCCChhhhhhh--ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 18 SQIVLTAGATPAV-EILCFCLADHGNALLVPSPYYPGFDRDIRF--RTGVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 18 ~~i~~~~g~~~~~-~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~--~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
+.+++.+|++.++ ..+...|.+.|.+|++..-.-.......+. ..+.++..+.++ --|.++++++++.....
T Consensus 9 ~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D-----~~~~~~~~~~~~~~~~~ 83 (253)
T 3qiv_A 9 NKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVD-----VSDPESAKAMADRTLAE 83 (253)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECC-----TTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEcc-----CCCHHHHHHHHHHHHHH
Confidence 3455566666666 344555667787777765432222222210 235566666642 23566777776655444
Q ss_pred CCceeEEEEeCCC---CCcc--cCCCHHHHHHHHH
Q 019899 95 GVKVRGILICNPA---NPVG--NIIPRETLYELLD 124 (334)
Q Consensus 95 ~~~~~~i~~~~p~---nptG--~~~~~~~l~~i~~ 124 (334)
.+++..++.+... .+.+ ...+.+++++..+
T Consensus 84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~ 118 (253)
T 3qiv_A 84 FGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMS 118 (253)
T ss_dssp HSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHh
Confidence 3467755544332 1111 1246566665554
No 337
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=53.88 E-value=80 Score=24.90 Aligned_cols=100 Identities=9% Similarity=0.183 Sum_probs=55.1
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhh---hhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRD---IRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~---~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
.+++.+|++.++- .+...|.+.|.+|++....-...... ++ ..+.++..+.++ --|.+++++.+++....
T Consensus 6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D-----~~~~~~~~~~~~~~~~~ 79 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMK-EKGFKARGLVLN-----ISDIESIQNFFAEIKAE 79 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH-HTTCCEEEEECC-----TTCHHHHHHHHHHHHHT
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH-hcCCceEEEEec-----CCCHHHHHHHHHHHHHH
Confidence 4556666666664 34455667788877665432222221 22 235556666542 23667788888776666
Q ss_pred CCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 95 GVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 95 ~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
.+++..++.+....+.+. -.+.+++++..+
T Consensus 80 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (247)
T 3lyl_A 80 NLAIDILVNNAGITRDNLMMRMSEDEWQSVIN 111 (247)
T ss_dssp TCCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 567886555544333222 346566666555
No 338
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=53.18 E-value=82 Score=24.85 Aligned_cols=100 Identities=14% Similarity=0.142 Sum_probs=49.8
Q ss_pred cEEEecCcHHHH-HHHHHHhcCCCCeEEecCCCCCChhhh---hhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 19 QIVLTAGATPAV-EILCFCLADHGNALLVPSPYYPGFDRD---IRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 19 ~i~~~~g~~~~~-~~~~~~l~~~gd~vl~~~p~~~~~~~~---~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
..++.+|++.++ ..+...|.+.|.+|++..-.-...... +. ..+.++..+..+ --|.+.++++++.....
T Consensus 12 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D-----~~~~~~~~~~~~~~~~~ 85 (255)
T 1fmc_A 12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQ-QLGGQAFACRCD-----ITSEQELSALADFAISK 85 (255)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHH-HTTCCEEEEECC-----TTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH-HhCCceEEEEcC-----CCCHHHHHHHHHHHHHh
Confidence 455666666666 344556667787777654321111111 11 124455555542 13567777777654433
Q ss_pred CCceeEEEEeCCCCCcc-cCCCHHHHHHHHH
Q 019899 95 GVKVRGILICNPANPVG-NIIPRETLYELLD 124 (334)
Q Consensus 95 ~~~~~~i~~~~p~nptG-~~~~~~~l~~i~~ 124 (334)
.+++..++.+....+.+ .-.+.+++++..+
T Consensus 86 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~ 116 (255)
T 1fmc_A 86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYE 116 (255)
T ss_dssp HSSCCEEEECCCCCCCCCTTCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCCCCCHHHHHHHHH
Confidence 34677666554432221 1345555555444
No 339
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=53.11 E-value=32 Score=27.62 Aligned_cols=96 Identities=13% Similarity=0.133 Sum_probs=49.7
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
.+++.+|++.++- .+...|.+.|.+|++..- ....... ..+.++..+.++ --|.++++++++.... .++
T Consensus 10 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r---~~~~~~~-~~~~~~~~~~~D-----~~~~~~v~~~~~~~~~-~g~ 79 (257)
T 3tl3_A 10 AVAVVTGGASGLGLATTKRLLDAGAQVVVLDI---RGEDVVA-DLGDRARFAAAD-----VTDEAAVASALDLAET-MGT 79 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEES---SCHHHHH-HTCTTEEEEECC-----TTCHHHHHHHHHHHHH-HSC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC---chHHHHH-hcCCceEEEECC-----CCCHHHHHHHHHHHHH-hCC
Confidence 4666667666764 445556677877776543 2223333 345455555542 1255666666654433 246
Q ss_pred eeEEEEeCCCCCccc------CCCHHHHHHHHH
Q 019899 98 VRGILICNPANPVGN------IIPRETLYELLD 124 (334)
Q Consensus 98 ~~~i~~~~p~nptG~------~~~~~~l~~i~~ 124 (334)
+..++.+......+. ..+.+++++..+
T Consensus 80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
T 3tl3_A 80 LRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVD 112 (257)
T ss_dssp EEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHH
T ss_pred CCEEEECCCCCCCcccccccccCCHHHHHHHHH
Confidence 774443332221111 156666666665
No 340
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=53.08 E-value=87 Score=25.11 Aligned_cols=95 Identities=12% Similarity=0.071 Sum_probs=50.4
Q ss_pred CcEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCC
Q 019899 18 SQIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGV 96 (334)
Q Consensus 18 ~~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~ 96 (334)
+.+++.+|++.++- .+...|.+.|.+|++..-.-.. .. ..++..+..+ --|.+.+++++++.....+
T Consensus 28 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~----~~---~~~~~~~~~D-----v~d~~~v~~~~~~~~~~~g 95 (260)
T 3un1_A 28 QKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKP----SA---DPDIHTVAGD-----ISKPETADRIVREGIERFG 95 (260)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCC----CS---STTEEEEESC-----TTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhh----cc---cCceEEEEcc-----CCCHHHHHHHHHHHHHHCC
Confidence 34666667766774 4455566788887766432211 11 1233344431 1356777777766544444
Q ss_pred ceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 97 KVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 97 ~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
++..++.+....+.+. -.+.+++++..+
T Consensus 96 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 125 (260)
T 3un1_A 96 RIDSLVNNAGVFLAKPFVEMTQEDYDHNLG 125 (260)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 7785555444332222 346666666655
No 341
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=52.04 E-value=79 Score=24.34 Aligned_cols=74 Identities=15% Similarity=0.077 Sum_probs=44.5
Q ss_pred cEEEecCc-HHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 19 QIVLTAGA-TPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 19 ~i~~~~g~-~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
++-+..+. .+++..+-. + +.|..|++.... ....++...+..|+.+++ +.-++.++|+..+..+.
T Consensus 30 ~i~i~~~~l~~~v~~a~~-~-~~~~dVIISRGg---ta~~lr~~~~iPVV~I~~--------s~~Dil~al~~a~~~~~- 95 (196)
T 2q5c_A 30 IPITKTASLTRASKIAFG-L-QDEVDAIISRGA---TSDYIKKSVSIPSISIKV--------TRFDTMRAVYNAKRFGN- 95 (196)
T ss_dssp EEEEEECCHHHHHHHHHH-H-TTTCSEEEEEHH---HHHHHHTTCSSCEEEECC--------CHHHHHHHHHHHGGGCS-
T ss_pred ceEEEECCHHHHHHHHHH-h-cCCCeEEEECCh---HHHHHHHhCCCCEEEEcC--------CHhHHHHHHHHHHhhCC-
Confidence 44444444 446665555 4 667667776644 334444356788888885 56778888887766543
Q ss_pred eeEEEEeCCC
Q 019899 98 VRGILICNPA 107 (334)
Q Consensus 98 ~~~i~~~~p~ 107 (334)
+..++..++
T Consensus 96 -kIavvg~~~ 104 (196)
T 2q5c_A 96 -ELALIAYKH 104 (196)
T ss_dssp -EEEEEEESS
T ss_pred -cEEEEeCcc
Confidence 444555444
No 342
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=51.88 E-value=54 Score=23.55 Aligned_cols=60 Identities=13% Similarity=0.077 Sum_probs=40.5
Q ss_pred ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcC---cEEEEe
Q 019899 61 RTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKN---IHVISD 136 (334)
Q Consensus 61 ~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~---~~vi~D 136 (334)
..|.+++.... ..+++++.++..+. ++.+|.++....++ ...++++++.+++.+ +.|++=
T Consensus 29 ~~G~~Vi~lG~------~~p~e~~v~~a~~~-----~~d~v~lS~~~~~~-----~~~~~~~i~~l~~~g~~~i~v~vG 91 (137)
T 1ccw_A 29 NAGFNVVNIGV------LSPQELFIKAAIET-----KADAILVSSLYGQG-----EIDCKGLRQKCDEAGLEGILLYVG 91 (137)
T ss_dssp HTTCEEEEEEE------EECHHHHHHHHHHH-----TCSEEEEEECSSTH-----HHHHTTHHHHHHHTTCTTCEEEEE
T ss_pred HCCCEEEECCC------CCCHHHHHHHHHhc-----CCCEEEEEecCcCc-----HHHHHHHHHHHHhcCCCCCEEEEE
Confidence 57999988764 35788888888775 88878777665432 334667777666653 455543
No 343
>1oft_A SULA, hypothetical protein PA3008; bacterial cell division inhibitor, FTSZ, SULA protein; 2.9A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=51.79 E-value=72 Score=23.81 Aligned_cols=101 Identities=13% Similarity=0.136 Sum_probs=58.0
Q ss_pred cEEEecCcHHHHHHHH---HHhcC--CCCeEEecCCCCCChhhhhhhccCcE---EEEEeCCCCCCccccHHHHHHHHHH
Q 019899 19 QIVLTAGATPAVEILC---FCLAD--HGNALLVPSPYYPGFDRDIRFRTGVE---LIPVHCRSTDNFAFSITALDQAFNQ 90 (334)
Q Consensus 19 ~i~~~~g~~~~~~~~~---~~l~~--~gd~vl~~~p~~~~~~~~~~~~~g~~---v~~v~~~~~~~~~~~~~~l~~~l~~ 90 (334)
++.....+...+..+. ..+.+ .+..|+.-.|-+..+...+. ..|.+ +..+.. .+..-.+..+|++++.
T Consensus 48 Ell~~~~g~gel~LL~P~La~l~~~~~~r~vlwI~Pp~~l~~~~L~-~~Gl~~~rll~v~~---~~~~daLwa~EqALrs 123 (161)
T 1oft_A 48 ELSLSGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLR-RAGLNRERILLLQA---KDNAAALALSCEALRL 123 (161)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHHTCSSSSEEEEESCCTTSCHHHHH-HTTCCGGGEEEECC---SSTTHHHHHHHHHHHT
T ss_pred EEccCCCcHHHHHHHHHHHHHhcccccCccEEEECCCCCCCHHHHH-HcCCCHHHEEEEEC---CChHHHHHHHHHHHhc
Confidence 4555544433333332 23332 34456666766777888877 77754 455553 2223356777788876
Q ss_pred HHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEE
Q 019899 91 ARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVI 134 (334)
Q Consensus 91 ~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi 134 (334)
+...+|+ ..+. .++..+.+++.-.++..+...+
T Consensus 124 -----G~~~aVl-~Wl~-----~l~~~~~RRLqlAAe~g~~~~f 156 (161)
T 1oft_A 124 -----GRSHTVV-SWLE-----PLSRAARKQLSRAAQLGQAQSL 156 (161)
T ss_dssp -----TCEEEEE-ECCS-----SCCHHHHHHHHHHHHHTTCEEE
T ss_pred -----CCccEEE-ECCC-----cCChHHHHHHHHHHHhCCCeEE
Confidence 2555444 4332 2677888888887777665543
No 344
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=51.71 E-value=88 Score=24.79 Aligned_cols=104 Identities=13% Similarity=0.157 Sum_probs=55.4
Q ss_pred CCCcEEEecCcHHHHHH-HHHHhcCCCCeEEecC-CCCCChhhhhhh--ccCcEEEEEeCCCCCCccccHHHHHHHHHHH
Q 019899 16 DPSQIVLTAGATPAVEI-LCFCLADHGNALLVPS-PYYPGFDRDIRF--RTGVELIPVHCRSTDNFAFSITALDQAFNQA 91 (334)
Q Consensus 16 ~~~~i~~~~g~~~~~~~-~~~~l~~~gd~vl~~~-p~~~~~~~~~~~--~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~ 91 (334)
..+..++.+|++.++-. +...|.+.|.+|++.. ..-......... ..+.++..+..+ --|.+.++++++..
T Consensus 11 ~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~ 85 (256)
T 3ezl_A 11 MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGN-----VGDWDSTKQAFDKV 85 (256)
T ss_dssp --CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECC-----TTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecC-----CCCHHHHHHHHHHH
Confidence 45567777777777744 4455667887777643 332222222210 234455555432 23667777777776
Q ss_pred HHcCCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 92 RKRGVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 92 ~~~~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
....+++..++.+....+.+. -.+.+++++..+
T Consensus 86 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 120 (256)
T 3ezl_A 86 KAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVID 120 (256)
T ss_dssp HHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 655557885555444333222 245566665554
No 345
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=51.64 E-value=83 Score=26.20 Aligned_cols=59 Identities=15% Similarity=0.164 Sum_probs=41.6
Q ss_pred CCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc---CcEEEE
Q 019899 74 TDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK---NIHVIS 135 (334)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~vi~ 135 (334)
+.+..+|.+.+++.++....+ ++..++++ .++--+..++.+|..++++.+.+. +++||+
T Consensus 29 ~~dg~iD~~~l~~lv~~li~~--Gv~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 90 (304)
T 3cpr_A 29 TESGDIDIAAGREVAAYLVDK--GLDSLVLA-GTTGESPTTTAAEKLELLKAVREEVGDRAKLIA 90 (304)
T ss_dssp CTTSCBCHHHHHHHHHHHHHT--TCCEEEES-STTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEe
Confidence 345689999999998876554 45555544 344445678999999999887653 577774
No 346
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=51.27 E-value=28 Score=26.62 Aligned_cols=50 Identities=6% Similarity=-0.184 Sum_probs=28.1
Q ss_pred EecCcHHHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCC
Q 019899 22 LTAGATPAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCR 72 (334)
Q Consensus 22 ~~~g~~~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~ 72 (334)
+...+.+.+...+..+.+.-|.|+++.|.......... ....+.+-+++.
T Consensus 57 ~~~~~~~~l~~~l~~l~~~yD~viiD~~~~~~~~~~~~-l~~ad~viiv~~ 106 (206)
T 4dzz_A 57 VFTAASEKDVYGIRKDLADYDFAIVDGAGSLSVITSAA-VMVSDLVIIPVT 106 (206)
T ss_dssp EEECCSHHHHHTHHHHTTTSSEEEEECCSSSSHHHHHH-HHHCSEEEEEEC
T ss_pred EEecCcHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHH-HHHCCEEEEEec
Confidence 33334456666677776677899999876554332221 223344555553
No 347
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=51.24 E-value=68 Score=26.18 Aligned_cols=102 Identities=12% Similarity=0.026 Sum_probs=53.2
Q ss_pred CcEEEecCcHHHHHH-HHHHhcCCCCeEEecCCCCCChhhhhhh--ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 18 SQIVLTAGATPAVEI-LCFCLADHGNALLVPSPYYPGFDRDIRF--RTGVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~-~~~~l~~~gd~vl~~~p~~~~~~~~~~~--~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
..+++.+|++.++-. +...|.+.|.+|++..-.-......... ..|.++..+.++ --|.+++++++++....
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~~ 102 (283)
T 3v8b_A 28 SPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEAD-----VSDELQMRNAVRDLVLK 102 (283)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECC-----TTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcc-----CCCHHHHHHHHHHHHHH
Confidence 345666666666644 4455667887777764332222222220 234456666542 23567777777665544
Q ss_pred CCceeEEEEeCCCC-Cccc--CCCHHHHHHHHH
Q 019899 95 GVKVRGILICNPAN-PVGN--IIPRETLYELLD 124 (334)
Q Consensus 95 ~~~~~~i~~~~p~n-ptG~--~~~~~~l~~i~~ 124 (334)
.+++..++.+.... +.+. -.+.+++++..+
T Consensus 103 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~ 135 (283)
T 3v8b_A 103 FGHLDIVVANAGINGVWAPIDDLKPFEWDETIA 135 (283)
T ss_dssp HSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHH
T ss_pred hCCCCEEEECCCCCCCCCchhhCCHHHHHHHHH
Confidence 45778554443332 2122 345566666655
No 348
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=51.18 E-value=70 Score=26.26 Aligned_cols=101 Identities=12% Similarity=0.108 Sum_probs=50.6
Q ss_pred cEEEecCcHHHH-HHHHHHhcCCCCeEEecCCCCCChhhhhhh--ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcC
Q 019899 19 QIVLTAGATPAV-EILCFCLADHGNALLVPSPYYPGFDRDIRF--RTGVELIPVHCRSTDNFAFSITALDQAFNQARKRG 95 (334)
Q Consensus 19 ~i~~~~g~~~~~-~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~--~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~ 95 (334)
.+++.+|++.++ ..+...|.+.|.+|++..-.-.......+. ..|.++..+.++ --|.++++++++.....-
T Consensus 35 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~~~ 109 (291)
T 3cxt_A 35 KIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCD-----VTDEDGIQAMVAQIESEV 109 (291)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCCEEEECC-----TTCHHHHHHHHHHHHHHT
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEec-----CCCHHHHHHHHHHHHHHc
Confidence 456666666666 444555667787777654321111111110 124344444432 135677777777655544
Q ss_pred CceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 96 VKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 96 ~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
+++.+++.+....+.+. -.+.++++++.+
T Consensus 110 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 140 (291)
T 3cxt_A 110 GIIDILVNNAGIIRRVPMIEMTAAQFRQVID 140 (291)
T ss_dssp CCCCEEEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred CCCcEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 56785554433322221 235566666554
No 349
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=50.97 E-value=22 Score=25.16 Aligned_cols=16 Identities=25% Similarity=0.275 Sum_probs=13.8
Q ss_pred HHHHHHHHhcCcEEEE
Q 019899 120 YELLDFAREKNIHVIS 135 (334)
Q Consensus 120 ~~i~~~~~~~~~~vi~ 135 (334)
+++.+.|+++|+.++-
T Consensus 95 ~e~~~~a~~~Girvv~ 110 (122)
T 3ff4_A 95 EELEEILSENGIEPVI 110 (122)
T ss_dssp HHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHcCCeEEC
Confidence 5888889999999984
No 350
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=50.93 E-value=96 Score=24.99 Aligned_cols=101 Identities=12% Similarity=0.163 Sum_probs=52.6
Q ss_pred CcEEEecCcHHHHHH-HHHHhcCCCCeEEec-CCCCCChhh---hhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHH
Q 019899 18 SQIVLTAGATPAVEI-LCFCLADHGNALLVP-SPYYPGFDR---DIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQAR 92 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~-~~~~l~~~gd~vl~~-~p~~~~~~~---~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~ 92 (334)
+.+++.+|++.++-. +...|.+.|.+|++. ...-..... .+. ..|.++..+.++ --|.++++++++...
T Consensus 27 ~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D-----l~~~~~v~~~~~~~~ 100 (267)
T 3u5t_A 27 NKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIE-AAGGKALTAQAD-----VSDPAAVRRLFATAE 100 (267)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHH-HTTCCEEEEECC-----TTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH-hcCCeEEEEEcC-----CCCHHHHHHHHHHHH
Confidence 456666666667744 445566778777764 222111111 122 245556666542 135677777776655
Q ss_pred HcCCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 93 KRGVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 93 ~~~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
...+++..++.+....+.+. -.+.++++++.+
T Consensus 101 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~ 134 (267)
T 3u5t_A 101 EAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIA 134 (267)
T ss_dssp HHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 44457775554433333222 345556666555
No 351
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=50.69 E-value=74 Score=26.42 Aligned_cols=59 Identities=10% Similarity=0.137 Sum_probs=42.3
Q ss_pred CCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc---CcEEEE
Q 019899 74 TDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK---NIHVIS 135 (334)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~vi~ 135 (334)
+.+..+|.+.+++.++....+ ++..++++ .++--+..++.+|.+++++.+.+. +++||+
T Consensus 20 ~~dg~iD~~~l~~lv~~li~~--Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 81 (297)
T 3flu_A 20 NQDGSIHYEQLRDLIDWHIEN--GTDGIVAV-GTTGESATLSVEEHTAVIEAVVKHVAKRVPVIA 81 (297)
T ss_dssp CTTSCBCHHHHHHHHHHHHHT--TCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCCcCHHHHHHHHHHHHHc--CCCEEEeC-ccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 345689999999998876554 45555544 444456788999999999887653 577776
No 352
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=50.49 E-value=61 Score=26.44 Aligned_cols=87 Identities=7% Similarity=-0.002 Sum_probs=42.2
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCC-CChhhhhhh---ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYY-PGFDRDIRF---RTGVELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~-~~~~~~~~~---~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
.+++.+|++.++- .+...|.+.|.+|++..-.- ......... ..|.++..+.++-.+ ..-..+.++++++....
T Consensus 24 k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~-~~~~~~~v~~~~~~~~~ 102 (288)
T 2x9g_A 24 PAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTN-SNVLPASCEEIINSCFR 102 (288)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSC-STTHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCC-ccCCHHHHHHHHHHHHH
Confidence 4666777777774 44455666787777654332 111111110 124455555542111 00015667666665544
Q ss_pred cCCceeEEEEeCC
Q 019899 94 RGVKVRGILICNP 106 (334)
Q Consensus 94 ~~~~~~~i~~~~p 106 (334)
..+++.+++.+..
T Consensus 103 ~~g~iD~lvnnAG 115 (288)
T 2x9g_A 103 AFGRCDVLVNNAS 115 (288)
T ss_dssp HHSCCCEEEECCC
T ss_pred hcCCCCEEEECCC
Confidence 3346775554433
No 353
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=50.49 E-value=90 Score=24.80 Aligned_cols=104 Identities=12% Similarity=0.079 Sum_probs=51.7
Q ss_pred CcEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhh---ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 18 SQIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRF---RTGVELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 18 ~~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~---~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
+.+++.+|++.++- .+...|.+.|.+|++..-.-......... ..+.++..+.++-. .-|.+.+++.++....
T Consensus 12 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~---~~~~~~~~~~~~~~~~ 88 (252)
T 3f1l_A 12 DRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLL---TCTSENCQQLAQRIAV 88 (252)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTT---TCCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecc---cCCHHHHHHHHHHHHH
Confidence 34666666666664 44555667888887765332222222110 11223334443111 1356777777776655
Q ss_pred cCCceeEEEEeCCC-CCccc--CCCHHHHHHHHH
Q 019899 94 RGVKVRGILICNPA-NPVGN--IIPRETLYELLD 124 (334)
Q Consensus 94 ~~~~~~~i~~~~p~-nptG~--~~~~~~l~~i~~ 124 (334)
..+++..++.+... .+.+. -.+.+++++..+
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 122 (252)
T 3f1l_A 89 NYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQ 122 (252)
T ss_dssp HCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHH
T ss_pred hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHh
Confidence 55578855544332 22222 245566666655
No 354
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=50.00 E-value=22 Score=30.32 Aligned_cols=74 Identities=18% Similarity=0.257 Sum_probs=46.1
Q ss_pred CCCCCChhhhhhhcc---CcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHH
Q 019899 48 SPYYPGFDRDIRFRT---GVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLD 124 (334)
Q Consensus 48 ~p~~~~~~~~~~~~~---g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~ 124 (334)
-|+|.+..+... .. ..-++.+|. ..-.+.+.+++.+ ..++++++.+.. ++.++.+++.+
T Consensus 64 vpvy~sv~ea~~-~~p~~DlaVi~vp~------~~a~~ai~ea~~~-----~Gv~~vViiT~G------~~e~~~~~l~~ 125 (334)
T 3mwd_B 64 IPVFKNMADAMR-KHPEVDVLINFASL------RSAYDSTMETMNY-----AQIRTIAIIAEG------IPEALTRKLIK 125 (334)
T ss_dssp EEEESSHHHHHH-HCTTCCEEEECCCT------TTHHHHHHHHTTS-----TTCCEEEECCSC------CCHHHHHHHHH
T ss_pred ceeeCCHHHHhh-cCCCCcEEEEecCH------HHHHHHHHHHHHH-----CCCCEEEEECCC------CCHHHHHHHHH
Confidence 467777777655 32 333444442 1123556666653 268877776544 33467889999
Q ss_pred HHHhcCcEEEEeccc
Q 019899 125 FAREKNIHVISDEIY 139 (334)
Q Consensus 125 ~~~~~~~~vi~D~~~ 139 (334)
+++++|+.++==++.
T Consensus 126 ~a~~~g~rliGPNc~ 140 (334)
T 3mwd_B 126 KADQKGVTIIGPATV 140 (334)
T ss_dssp HHHHHTCEEECSSCC
T ss_pred HHHHcCCEEEccCCc
Confidence 999999999944443
No 355
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=49.66 E-value=97 Score=24.65 Aligned_cols=97 Identities=12% Similarity=0.080 Sum_probs=48.3
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
..++.+|++.++- .+...|.+.|.+|++..-.-.. ....+ ..+..++..++ -|.++++++++......++
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~-~~~~~~~~~D~-------~~~~~~~~~~~~~~~~~g~ 77 (256)
T 2d1y_A 7 KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAE-AIGGAFFQVDL-------EDERERVRFVEEAAYALGR 77 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHH-HHTCEEEECCT-------TCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHH-HhhCCEEEeeC-------CCHHHHHHHHHHHHHHcCC
Confidence 3455556666664 4455566778777765433222 22222 22213333333 2566677776655443346
Q ss_pred eeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 98 VRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 98 ~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
+..++.+....+.+. -.+.+++++..+
T Consensus 78 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 106 (256)
T 2d1y_A 78 VDVLVNNAAIAAPGSALTVRLPEWRRVLE 106 (256)
T ss_dssp CCEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 775554443333332 235555655554
No 356
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=49.56 E-value=54 Score=26.53 Aligned_cols=82 Identities=7% Similarity=0.080 Sum_probs=41.3
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhh-----ccCcEEEEEeCCCCCCccccHHHHHHHHHHHH
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRF-----RTGVELIPVHCRSTDNFAFSITALDQAFNQAR 92 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~-----~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~ 92 (334)
.+++.+|++.++- .+...|.+.|.+|++..-.-.......+. ..+.++..+..+ --|.+.++++++...
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D-----~~~~~~~~~~~~~~~ 81 (278)
T 1spx_A 7 KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVAD-----VTTDAGQDEILSTTL 81 (278)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECC-----TTSHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecc-----cCCHHHHHHHHHHHH
Confidence 4666677776774 44455667787777654321111111110 123345555432 125666777666544
Q ss_pred HcCCceeEEEEeC
Q 019899 93 KRGVKVRGILICN 105 (334)
Q Consensus 93 ~~~~~~~~i~~~~ 105 (334)
...+++..++.+.
T Consensus 82 ~~~g~id~lv~~A 94 (278)
T 1spx_A 82 GKFGKLDILVNNA 94 (278)
T ss_dssp HHHSCCCEEEECC
T ss_pred HHcCCCCEEEECC
Confidence 4334677555443
No 357
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=49.29 E-value=16 Score=32.75 Aligned_cols=54 Identities=20% Similarity=0.265 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCC-cccCCCHHHHHHHHHHHHhcCcEEEEeccccc
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANP-VGNIIPRETLYELLDFAREKNIHVISDEIYGG 141 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~np-tG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~ 141 (334)
.+.++++++. +++.+++.....+ +|. --.+.-+++.+.|+++|+.++-+.+.+.
T Consensus 78 ~~~v~e~~~~------Gi~~vv~~s~G~~e~g~-~g~~~~~~l~~~a~~~g~~viGPnc~Gv 132 (457)
T 2csu_A 78 KDTLIQCGEK------GVKGVVIITAGFGETGE-EGKREEKELVEIAHKYGMRIIGPNCVGI 132 (457)
T ss_dssp HHHHHHHHHH------TCCEEEECCCSSTTSCH-HHHHHHHHHHHHHHHHTCEEECSSCCEE
T ss_pred HHHHHHHHHc------CCCEEEEecCCCCcccc-ccHHHHHHHHHHHHHcCCEEEcCCcceE
Confidence 4555555555 6787666644432 231 0011257888899999999998877543
No 358
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=49.23 E-value=43 Score=30.01 Aligned_cols=26 Identities=15% Similarity=0.342 Sum_probs=23.8
Q ss_pred CHHHHHHHHHHHHhcCcEEEEecccc
Q 019899 115 PRETLYELLDFAREKNIHVISDEIYG 140 (334)
Q Consensus 115 ~~~~l~~i~~~~~~~~~~vi~D~~~~ 140 (334)
+.++++++++.|+++||.||+|-++-
T Consensus 77 t~~df~~lv~~aH~~Gi~VilD~V~N 102 (483)
T 3bh4_A 77 TKSELQDAIGSLHSRNVQVYGDVVLN 102 (483)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 57899999999999999999998864
No 359
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=49.20 E-value=18 Score=35.01 Aligned_cols=73 Identities=16% Similarity=0.218 Sum_probs=47.9
Q ss_pred CCCCCChhhhhhhc--cCcEEEEEeCCCCCCccccHHHHHHHHH-HHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHH
Q 019899 48 SPYYPGFDRDIRFR--TGVELIPVHCRSTDNFAFSITALDQAFN-QARKRGVKVRGILICNPANPVGNIIPRETLYELLD 124 (334)
Q Consensus 48 ~p~~~~~~~~~~~~--~g~~v~~v~~~~~~~~~~~~~~l~~~l~-~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~ 124 (334)
-|+|++..+..... ...-++.+|. ..-.+.++++++ . +++++++.+...| ..+.+++.+
T Consensus 550 vp~y~sv~ea~~~~p~~DlaVI~vP~------~~v~~av~ea~~~~------Gvk~~Viis~Gf~------e~~~~~l~~ 611 (829)
T 3pff_A 550 IPVFKNMADAMRKHPEVDVLINFASL------RSAYDSTMETMNYA------QIRTIAIIAEGIP------EALTRKLIK 611 (829)
T ss_dssp EEEESSHHHHHHHCTTCCEEEECCCT------TTHHHHHHHHTTST------TCCEEEECCSCCC------HHHHHHHHH
T ss_pred cccCCcHHHHhhccCCCcEEEEeCCH------HHHHHHHHHHHhhC------CCCEEEEeCCCCC------HHHHHHHHH
Confidence 47788877766511 2445555553 234566777666 4 6887777655433 456788999
Q ss_pred HHHhcCcEEEEecc
Q 019899 125 FAREKNIHVISDEI 138 (334)
Q Consensus 125 ~~~~~~~~vi~D~~ 138 (334)
+|+++|+.||==++
T Consensus 612 ~A~~~g~rliGPNc 625 (829)
T 3pff_A 612 KADQKGVTIIGPAT 625 (829)
T ss_dssp HHHHHTCEEECSSC
T ss_pred HHHHcCCEEEcCCC
Confidence 99999999994443
No 360
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=49.08 E-value=81 Score=25.69 Aligned_cols=102 Identities=16% Similarity=0.108 Sum_probs=53.9
Q ss_pred CcEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhh--ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 18 SQIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRF--RTGVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 18 ~~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~--~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
+.+++.+|++.++- .+...|.+.|.+|++..-.-......... ..+.++..+.++ --|.+.++++++.....
T Consensus 8 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~ 82 (280)
T 3tox_A 8 GKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGD-----VGDEALHEALVELAVRR 82 (280)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCC-----TTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECC-----CCCHHHHHHHHHHHHHH
Confidence 35666777777774 44455667888887765432222222220 234556655542 23566777776655444
Q ss_pred CCceeEEEEeCCCC-Cccc--CCCHHHHHHHHH
Q 019899 95 GVKVRGILICNPAN-PVGN--IIPRETLYELLD 124 (334)
Q Consensus 95 ~~~~~~i~~~~p~n-ptG~--~~~~~~l~~i~~ 124 (334)
.+++..++.+.... +.+. -.+.+++++..+
T Consensus 83 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 115 (280)
T 3tox_A 83 FGGLDTAFNNAGALGAMGEISSLSVEGWRETLD 115 (280)
T ss_dssp HSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHH
Confidence 34677554443322 2222 346666666665
No 361
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=48.83 E-value=15 Score=33.05 Aligned_cols=72 Identities=18% Similarity=0.246 Sum_probs=42.9
Q ss_pred CCCCCChhhhhhhc--cCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHH
Q 019899 48 SPYYPGFDRDIRFR--TGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDF 125 (334)
Q Consensus 48 ~p~~~~~~~~~~~~--~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~ 125 (334)
-|.|..|....... ...-++.+|. ..-.+.++++.+. +++ +++.+...| .++.+++.+.
T Consensus 21 ~Pv~~~~~~~~~~p~~~DlavI~vPa------~~v~~~v~e~~~~------Gv~-~viis~Gf~------~~~~~~l~~~ 81 (480)
T 3dmy_A 21 LTQVRRWDSACQKLPDANLALISVAG------EYAAELANQALDR------NLN-VMMFSDNVT------LEDEIQLKTR 81 (480)
T ss_dssp CEEESSHHHHHHHSTTCCEEEECSCH------HHHHHHHHHHHHT------TCE-EEECCCCCC------HHHHHHHHHH
T ss_pred CcccchHHHHHhcCCCCCEEEEecCH------HHHHHHHHHHHhc------CCC-EEEECCCCC------HHHHHHHHHH
Confidence 45666666665522 3344555552 2234555555554 567 444433333 5667899999
Q ss_pred HHhcCcEEEEecc
Q 019899 126 AREKNIHVISDEI 138 (334)
Q Consensus 126 ~~~~~~~vi~D~~ 138 (334)
|+++|+.++==++
T Consensus 82 A~~~g~rliGPNc 94 (480)
T 3dmy_A 82 AREKGLLVMGPDC 94 (480)
T ss_dssp HHHTTCCEECSSC
T ss_pred HHHcCCEEEecCc
Confidence 9999999994333
No 362
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=48.45 E-value=67 Score=26.90 Aligned_cols=59 Identities=8% Similarity=0.027 Sum_probs=42.9
Q ss_pred CCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc--CcEEEE
Q 019899 74 TDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK--NIHVIS 135 (334)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~--~~~vi~ 135 (334)
+.+..+|.+.+++.++..... ++..++++ .++--+..++.+|.+++++.+.+. +++||+
T Consensus 21 ~~dg~iD~~~l~~lv~~li~~--Gv~Gl~v~-GtTGE~~~Lt~~Er~~v~~~~v~~~grvpVia 81 (313)
T 3dz1_A 21 HDDGKIDDVSIDRLTDFYAEV--GCEGVTVL-GILGEAPKLDAAEAEAVATRFIKRAKSMQVIV 81 (313)
T ss_dssp CTTSCBCHHHHHHHHHHHHHT--TCSEEEES-TGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCCCcCHHHHHHHHHHHHHC--CCCEEEeC-ccCcChhhCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 345689999999998876554 45555544 344445678999999999988665 688886
No 363
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A
Probab=48.41 E-value=37 Score=31.83 Aligned_cols=60 Identities=15% Similarity=0.129 Sum_probs=40.1
Q ss_pred ccHHHHHHHHHHHHHcCCceeEEEEeCC-CCCcc-----c-----------CCCHHHHHHHHHHHHhcCcEEEEecccc
Q 019899 79 FSITALDQAFNQARKRGVKVRGILICNP-ANPVG-----N-----------IIPRETLYELLDFAREKNIHVISDEIYG 140 (334)
Q Consensus 79 ~~~~~l~~~l~~~~~~~~~~~~i~~~~p-~nptG-----~-----------~~~~~~l~~i~~~~~~~~~~vi~D~~~~ 140 (334)
-|+..+.+.|.-.+.- ++.+|+++-+ .+|.| . .-+.++++++++-|+++||.||.|-++.
T Consensus 103 Gdl~gi~~~LdyL~~L--Gv~~I~L~Pi~~~~~~~~~~GY~~~dy~~vdp~~Gt~~df~~Lv~~aH~~GI~VilD~V~N 179 (644)
T 3czg_A 103 GTLQGVAERVPYLQEL--GVRYLHLLPFLRARAGDNDGGFAVSDYGQVEPSLGSNDDLVALTSRLREAGISLCADFVLN 179 (644)
T ss_dssp SSHHHHHHTHHHHHHH--TCCEEEECCCBCBCSSCCTTTTSBSCTTSBCGGGCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCHHHHHHHHHHHHHc--CCCEEEeCCCCcCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEecC
Confidence 3566666555322222 5677877744 33322 1 1157899999999999999999998864
No 364
>2orv_A Thymidine kinase; TP4A (P1-(5'-adenosyl)P4-(5'- (2'deoxythymidil))tetraphosphate, transferase; HET: 4TA; 2.30A {Homo sapiens} SCOP: c.37.1.24 g.39.1.14
Probab=48.24 E-value=77 Score=25.32 Aligned_cols=115 Identities=14% Similarity=0.014 Sum_probs=63.4
Q ss_pred CcEEEecCc------HHHHHHHHHHhcCCCCeEEecCCCCCCh--hhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHH
Q 019899 18 SQIVLTAGA------TPAVEILCFCLADHGNALLVPSPYYPGF--DRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFN 89 (334)
Q Consensus 18 ~~i~~~~g~------~~~~~~~~~~l~~~gd~vl~~~p~~~~~--~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~ 89 (334)
..+.+..|. |+++..+.... ..|.+|++..|.-..- ..... +.|.++..+++... +++.+.+
T Consensus 19 g~l~v~~G~MgsGKTT~lL~~~~r~~-~~g~kvli~kp~~D~Ryg~~i~s-r~G~~~~a~~i~~~-------~di~~~~- 88 (234)
T 2orv_A 19 GQIQVILGPMFSGKSTELMRRVRRFQ-IAQYKCLVIKYAKDTRYSSSFCT-HDRNTMEALPACLL-------RDVAQEA- 88 (234)
T ss_dssp CEEEEEECCTTSCHHHHHHHHHHHHH-TTTCCEEEEEETTCCCC------------CEEEEESSG-------GGGHHHH-
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHH-HCCCeEEEEeecCCccchHHHHh-hcCCeeEEEecCCH-------HHHHHHh-
Confidence 345554444 45666655554 5677787776643211 34445 56777666665311 2233333
Q ss_pred HHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhh
Q 019899 90 QARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILE 157 (334)
Q Consensus 90 ~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~ 157 (334)
.++.+|++...+.-++ +.+++++....|+.||+=.-..+ |.+..+.....+.+
T Consensus 89 ------~~~dvViIDEaQF~~~-------v~el~~~l~~~gi~VI~~GL~~D--F~~~~F~~~~~Ll~ 141 (234)
T 2orv_A 89 ------LGVAVIGIDEGQFFPD-------IVEFCEAMANAGKTVIVAALDGT--FQRKPFGAILNLVP 141 (234)
T ss_dssp ------TTCSEEEESSGGGCTT-------HHHHHHHHHHTTCEEEEECCSBC--TTSSBCTTGGGGGG
T ss_pred ------ccCCEEEEEchhhhhh-------HHHHHHHHHhCCCEEEEEecccc--cccCCcccHHHHHH
Confidence 2678888888876532 77888888889999998776665 44555555555554
No 365
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=48.21 E-value=62 Score=23.26 Aligned_cols=22 Identities=9% Similarity=-0.005 Sum_probs=16.9
Q ss_pred HHHHHHHHHhcCcEEEEecccc
Q 019899 119 LYELLDFAREKNIHVISDEIYG 140 (334)
Q Consensus 119 l~~i~~~~~~~~~~vi~D~~~~ 140 (334)
-+++.+.++++|+.++-+.+.+
T Consensus 105 ~~~l~~~a~~~Gi~~igpnc~g 126 (138)
T 1y81_A 105 SEEIRRFLEKAGVEYSFGRCIM 126 (138)
T ss_dssp CHHHHHHHHHHTCEEECSCCHH
T ss_pred HHHHHHHHHHCCCEEEcCCcce
Confidence 3778888999999988666543
No 366
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=47.98 E-value=99 Score=24.29 Aligned_cols=100 Identities=9% Similarity=0.091 Sum_probs=48.4
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhhccC--cEEEEEeCCCCCCccccHHHHHHHHHHHHHcC
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRFRTG--VELIPVHCRSTDNFAFSITALDQAFNQARKRG 95 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g--~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~ 95 (334)
..++.+|++.++- .+...|.+.|.+|++..-.-.......+ ... .++..+..+ --|.+.++++++......
T Consensus 7 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~D-----~~~~~~~~~~~~~~~~~~ 80 (251)
T 1zk4_A 7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAK-SVGTPDQIQFFQHD-----SSDEDGWTKLFDATEKAF 80 (251)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHCCTTTEEEEECC-----TTCHHHHHHHHHHHHHHH
T ss_pred cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HhhccCceEEEECC-----CCCHHHHHHHHHHHHHHh
Confidence 4566666666664 4455566778777765432111111111 111 233344431 125566777666544333
Q ss_pred CceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 96 VKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 96 ~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
+++..++.+....+.+. -.+.+++++..+
T Consensus 81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (251)
T 1zk4_A 81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLA 111 (251)
T ss_dssp SSCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 46776655544333332 245555555554
No 367
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=47.97 E-value=1e+02 Score=24.48 Aligned_cols=100 Identities=11% Similarity=0.017 Sum_probs=49.7
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
..++.+|++.++- .+...|.+.|.+|++..-.-.......+ ..+.++..+.++ --|.++++++++......++
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D-----~~~~~~~~~~~~~~~~~~g~ 79 (254)
T 1hdc_A 6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAR-ELGDAARYQHLD-----VTIEEDWQRVVAYAREEFGS 79 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TTGGGEEEEECC-----TTCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HhCCceeEEEec-----CCCHHHHHHHHHHHHHHcCC
Confidence 4555566666664 4455566788777765432222222222 234445555542 12556677766654443346
Q ss_pred eeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 98 VRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 98 ~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
+..++.+....+.+. -.+.+++++..+
T Consensus 80 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 108 (254)
T 1hdc_A 80 VDGLVNNAGISTGMFLETESVERFRKVVE 108 (254)
T ss_dssp CCEEEECCCCCCCSCGGGSCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 775554433322221 245555655554
No 368
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=47.89 E-value=89 Score=25.00 Aligned_cols=101 Identities=16% Similarity=0.166 Sum_probs=49.7
Q ss_pred cEEEecCcHHHH-HHHHHHhcCCCCeEEecCCCCCChhhhhhh--ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcC
Q 019899 19 QIVLTAGATPAV-EILCFCLADHGNALLVPSPYYPGFDRDIRF--RTGVELIPVHCRSTDNFAFSITALDQAFNQARKRG 95 (334)
Q Consensus 19 ~i~~~~g~~~~~-~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~--~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~ 95 (334)
.+++.+|++.++ ..+...|.+.|.+|++..-.-......... ..|.++..+.++ --|.++++++++.....-
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D-----~~~~~~~~~~~~~~~~~~ 82 (262)
T 1zem_A 8 KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCD-----VTSEEAVIGTVDSVVRDF 82 (262)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECC-----TTCHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEec-----CCCHHHHHHHHHHHHHHh
Confidence 455566666666 444555667787777654221111111110 235455555542 125667776666554433
Q ss_pred CceeEEEEeCCCC-Cccc--CCCHHHHHHHHH
Q 019899 96 VKVRGILICNPAN-PVGN--IIPRETLYELLD 124 (334)
Q Consensus 96 ~~~~~i~~~~p~n-ptG~--~~~~~~l~~i~~ 124 (334)
+++..++.+.... +.+. -.+.+++++..+
T Consensus 83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 114 (262)
T 1zem_A 83 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLT 114 (262)
T ss_dssp SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCccccCCHHHHHHHHH
Confidence 4677555443322 2222 245566666554
No 369
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=47.82 E-value=1.1e+02 Score=24.75 Aligned_cols=100 Identities=15% Similarity=0.129 Sum_probs=48.2
Q ss_pred cEEEecCcH--HHHH-HHHHHhcCCCCeEEecCCCC-CChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 19 QIVLTAGAT--PAVE-ILCFCLADHGNALLVPSPYY-PGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 19 ~i~~~~g~~--~~~~-~~~~~l~~~gd~vl~~~p~~-~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
.+++.+|++ .++- .+...|.+.|.+|++..-.- ......+....+ ++..+.++ --|.++++++++.....
T Consensus 27 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~-~~~~~~~D-----l~~~~~v~~~~~~~~~~ 100 (280)
T 3nrc_A 27 KKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFN-PAAVLPCD-----VISDQEIKDLFVELGKV 100 (280)
T ss_dssp CEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGC-CSEEEECC-----TTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcC-CceEEEee-----cCCHHHHHHHHHHHHHH
Confidence 456666644 3453 33445566777776654332 111111210222 23334331 13567777777776555
Q ss_pred CCceeEEEEeCCCCCc----ccC---CCHHHHHHHHH
Q 019899 95 GVKVRGILICNPANPV----GNI---IPRETLYELLD 124 (334)
Q Consensus 95 ~~~~~~i~~~~p~npt----G~~---~~~~~l~~i~~ 124 (334)
.+++..++.+....+. +.. .+.+++++..+
T Consensus 101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (280)
T 3nrc_A 101 WDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHD 137 (280)
T ss_dssp CSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHH
T ss_pred cCCCCEEEECCccCCCcccCCccccccCHHHHHHHHH
Confidence 5578855544433322 111 45555555554
No 370
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=47.76 E-value=46 Score=29.79 Aligned_cols=26 Identities=19% Similarity=0.298 Sum_probs=23.8
Q ss_pred CHHHHHHHHHHHHhcCcEEEEecccc
Q 019899 115 PRETLYELLDFAREKNIHVISDEIYG 140 (334)
Q Consensus 115 ~~~~l~~i~~~~~~~~~~vi~D~~~~ 140 (334)
+.++++++++.|+++||.||+|-++-
T Consensus 81 t~~df~~Lv~~aH~~Gi~VilD~V~N 106 (485)
T 1wpc_A 81 TRSQLQAAVTSLKNNGIQVYGDVVMN 106 (485)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 57899999999999999999998864
No 371
>1wzu_A Quinolinate synthetase A; NAD, biosynthetic protein; 2.00A {Pyrococcus horikoshii} SCOP: c.145.1.1 PDB: 2qs0_A
Probab=47.72 E-value=14 Score=30.91 Aligned_cols=80 Identities=15% Similarity=0.146 Sum_probs=45.3
Q ss_pred CCCeEEecCCCCCChhhhhhhccCcEEEEEe--CCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCccc-----
Q 019899 40 HGNALLVPSPYYPGFDRDIRFRTGVELIPVH--CRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGN----- 112 (334)
Q Consensus 40 ~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~----- 112 (334)
++++|++-+-.+-.+.-. + ..|.+++.++ ..=.....++++++.++.+. .+.+.++.+|..|.-+
T Consensus 137 ~~~~iif~pD~~Lg~~l~-~-~~~k~~i~~~~~g~C~vh~~~t~e~i~~~~~~------~P~a~v~~HPEc~~~v~~~aD 208 (300)
T 1wzu_A 137 DSDVVIFGPDKNLAHYVA-K-MTGKKIIPVPSKGHCYVHQKFTLDDVERAKKL------HPNAKLMIHPECIPEVQEKAD 208 (300)
T ss_dssp SCSEEEEESCHHHHHHHH-H-HHCCEEEEC-----------CCHHHHHHHHHH------CTTCEEEECTTSCHHHHHTCS
T ss_pred CCCeEEEECChhHHHHHH-H-HcCCeEEECCCCCcCCCcccCCHHHHHHHHHH------CCCCEEEECCCCCHHHHhhcc
Confidence 667777665554433322 2 3488887776 11123346889999998887 5777888999765322
Q ss_pred -CCCHHHHHHHHHHHHhcC
Q 019899 113 -IIPRETLYELLDFAREKN 130 (334)
Q Consensus 113 -~~~~~~l~~i~~~~~~~~ 130 (334)
+-| -..|++.+++..
T Consensus 209 ~vgS---T~~ii~~~~~~~ 224 (300)
T 1wzu_A 209 IIAS---TGGMIKRACEWD 224 (300)
T ss_dssp EECC---HHHHHHHGGGCS
T ss_pred ccCC---HHHHHHHHHhCC
Confidence 223 355556665555
No 372
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=47.66 E-value=43 Score=31.09 Aligned_cols=60 Identities=15% Similarity=0.088 Sum_probs=41.6
Q ss_pred ccHHHHHHHHHHHHHcCCceeEEEEeCC-CCC------ccc-----------CCCHHHHHHHHHHHHhcCcEEEEecccc
Q 019899 79 FSITALDQAFNQARKRGVKVRGILICNP-ANP------VGN-----------IIPRETLYELLDFAREKNIHVISDEIYG 140 (334)
Q Consensus 79 ~~~~~l~~~l~~~~~~~~~~~~i~~~~p-~np------tG~-----------~~~~~~l~~i~~~~~~~~~~vi~D~~~~ 140 (334)
-|+..+.+.|.-.+.- ++.+|+++-+ .++ .|. .-+.++++++++-|+++|+.||+|-++-
T Consensus 145 Gdl~gi~~~Ldyl~~L--Gv~aI~l~Pi~~~~~~~~~~~GY~~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~N 222 (601)
T 3edf_A 145 GDIRGTIDHLDYIAGL--GFTQLWPTPLVENDAAAYSYHGYAATDHYRIDPRYGSNEDFVRLSTEARKRGMGLIQDVVLS 222 (601)
T ss_dssp CCHHHHHHTHHHHHHT--TCCEEEESCCEECCCSSSGGGCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCHHHHHHHHHHHHHc--CCCEEEECccccCCCCCCCCCCcCccccccccccCCCHHHHHHHHHHHHHcCCEEEEEECCc
Confidence 4677777666544333 5677777644 232 121 1267899999999999999999999864
No 373
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=47.62 E-value=1e+02 Score=24.74 Aligned_cols=103 Identities=11% Similarity=0.073 Sum_probs=52.9
Q ss_pred CcEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhh--c-c-CcEEEEEeCCCCCCccccHHHHHHHHHHHH
Q 019899 18 SQIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRF--R-T-GVELIPVHCRSTDNFAFSITALDQAFNQAR 92 (334)
Q Consensus 18 ~~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~--~-~-g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~ 92 (334)
+.+++.+|++.++- .+...|.+.|.+|++..-.-......... . . +.++..+.++ --|.++++++++...
T Consensus 8 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~~ 82 (265)
T 3lf2_A 8 EAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCD-----VLDALQVRAFAEACE 82 (265)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECC-----TTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCC-----CCCHHHHHHHHHHHH
Confidence 34556666666664 44555667888887765332222222110 1 2 2235555542 235667777766654
Q ss_pred HcCCceeEEEEeCCCCCccc--CCCHHHHHHHHHH
Q 019899 93 KRGVKVRGILICNPANPVGN--IIPRETLYELLDF 125 (334)
Q Consensus 93 ~~~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~~ 125 (334)
...+++..++.+....+.+. -.+.+++++..+.
T Consensus 83 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 117 (265)
T 3lf2_A 83 RTLGCASILVNNAGQGRVSTFAETTDEAWSEELQL 117 (265)
T ss_dssp HHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 44446775554443333333 3466667666653
No 374
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=47.53 E-value=1.1e+02 Score=24.81 Aligned_cols=100 Identities=11% Similarity=0.132 Sum_probs=54.6
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCC-------h---hhhhhhccCcEEEEEeCCCCCCccccHHHHHHH
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPG-------F---DRDIRFRTGVELIPVHCRSTDNFAFSITALDQA 87 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~-------~---~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~ 87 (334)
.+++.+|++.++- .+...|.+.|.+|++..-.-.. . ...+. ..|.++..+.++ --|.++++++
T Consensus 10 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D-----v~~~~~v~~~ 83 (285)
T 3sc4_A 10 KTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIE-EAGGQALPIVGD-----IRDGDAVAAA 83 (285)
T ss_dssp CEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHH-HHTSEEEEEECC-----TTSHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHH-hcCCcEEEEECC-----CCCHHHHHHH
Confidence 4566666666664 4455667788887766433221 1 11222 345667766652 2356777777
Q ss_pred HHHHHHcCCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 88 FNQARKRGVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 88 l~~~~~~~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
++......+++..++.+....+.+. -.+.++++++.+
T Consensus 84 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 122 (285)
T 3sc4_A 84 VAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNG 122 (285)
T ss_dssp HHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 7665544447785554444333332 346666666655
No 375
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=47.47 E-value=83 Score=26.01 Aligned_cols=58 Identities=9% Similarity=0.092 Sum_probs=40.9
Q ss_pred CCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc---CcEEEE
Q 019899 75 DNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK---NIHVIS 135 (334)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~vi~ 135 (334)
++..+|.+.+++.++..... ++..++++ .++--+..++.+|..++++.+.+. +++||+
T Consensus 15 ~dg~iD~~~l~~lv~~li~~--Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 75 (292)
T 2ojp_A 15 EKGNVCRASLKKLIDYHVAS--GTSAIVSV-GTTGESATLNHDEHADVVMMTLDLADGRIPVIA 75 (292)
T ss_dssp TTSCBCHHHHHHHHHHHHHH--TCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccchhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 45689999999988766554 45555544 444456678999999999887653 577774
No 376
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=47.41 E-value=1.2e+02 Score=24.97 Aligned_cols=101 Identities=12% Similarity=0.166 Sum_probs=52.9
Q ss_pred cEEEecCcHHHHHH-HHHHhcCCCCeEEecCCCCCChhhhhhh--ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcC
Q 019899 19 QIVLTAGATPAVEI-LCFCLADHGNALLVPSPYYPGFDRDIRF--RTGVELIPVHCRSTDNFAFSITALDQAFNQARKRG 95 (334)
Q Consensus 19 ~i~~~~g~~~~~~~-~~~~l~~~gd~vl~~~p~~~~~~~~~~~--~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~ 95 (334)
.+++.+|++.++-. +...|.+.|.+|++..-.-.......+. ..|.++..+.++ --|.+.++++++......
T Consensus 32 k~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~~~ 106 (301)
T 3tjr_A 32 RAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCD-----VRHLDEMVRLADEAFRLL 106 (301)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECC-----TTCHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcc-----CCCHHHHHHHHHHHHHhC
Confidence 45666666666643 4455667888877765432222222210 234455555542 135667777776554443
Q ss_pred CceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 96 VKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 96 ~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
+++..++.+......+. -.+.+++++..+
T Consensus 107 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 137 (301)
T 3tjr_A 107 GGVDVVFSNAGIVVAGPLAQMNHDDWRWVID 137 (301)
T ss_dssp SSCSEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 46775554443333332 346666666555
No 377
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=47.35 E-value=1.1e+02 Score=24.62 Aligned_cols=32 Identities=16% Similarity=0.129 Sum_probs=18.0
Q ss_pred hhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHH
Q 019899 54 FDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQ 90 (334)
Q Consensus 54 ~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~ 90 (334)
|.+.+. ..|++.+++..... .++....+.+++
T Consensus 101 ~i~~~~-~aGAd~itvH~Ea~----~~~~~~i~~ir~ 132 (246)
T 3inp_A 101 LIESFA-KAGATSIVFHPEAS----EHIDRSLQLIKS 132 (246)
T ss_dssp HHHHHH-HHTCSEEEECGGGC----SCHHHHHHHHHT
T ss_pred HHHHHH-HcCCCEEEEccccc----hhHHHHHHHHHH
Confidence 455555 57888888875321 134455555544
No 378
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=47.34 E-value=84 Score=25.97 Aligned_cols=59 Identities=8% Similarity=0.081 Sum_probs=41.7
Q ss_pred CCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc---CcEEEE
Q 019899 74 TDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK---NIHVIS 135 (334)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~vi~ 135 (334)
+.+..+|.+.+++.++..... ++..++++ .++--+..++.+|.+++++.+.+. +++||+
T Consensus 14 ~~dg~iD~~~l~~lv~~li~~--Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 75 (291)
T 3tak_A 14 LKDGGVDWKSLEKLVEWHIEQ--GTNSIVAV-GTTGEASTLSMEEHTQVIKEIIRVANKRIPIIA 75 (291)
T ss_dssp CTTSCBCHHHHHHHHHHHHHH--TCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCCcCHHHHHHHHHHHHHC--CCCEEEEC-ccccccccCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 345689999999988766554 45555544 444446778999999999988663 577775
No 379
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=47.25 E-value=1.2e+02 Score=24.97 Aligned_cols=79 Identities=10% Similarity=0.069 Sum_probs=44.5
Q ss_pred CCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHH
Q 019899 40 HGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETL 119 (334)
Q Consensus 40 ~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l 119 (334)
++..+++.++.|.- .++ .+|.+.+.+.-. ..+...+...|.+.++..+.+ ++++|+.. ++.+.
T Consensus 178 ~~~~~v~~H~af~Y---f~~-~yGl~~~~~~~~-~~~~eps~~~l~~l~~~ik~~--~v~~if~e-~~~~~--------- 240 (286)
T 3gi1_A 178 RSKTFVTQHTAFSY---LAK-RFGLKQLGISGI-SPEQEPSPRQLKEIQDFVKEY--NVKTIFAE-DNVNP--------- 240 (286)
T ss_dssp SCCEEEEEESCCHH---HHH-HTTCEEEEEECS-CC---CCHHHHHHHHHHHHHT--TCCEEEEC-TTSCT---------
T ss_pred CCCEEEEECCchHH---HHH-HCCCeEeecccc-CCCCCCCHHHHHHHHHHHHHc--CCCEEEEe-CCCCh---------
Confidence 46678877776653 344 788888766522 233456666666665544333 67855554 44321
Q ss_pred HHHHHHHHhcCcEEEE
Q 019899 120 YELLDFAREKNIHVIS 135 (334)
Q Consensus 120 ~~i~~~~~~~~~~vi~ 135 (334)
+..-.++++.|+.+++
T Consensus 241 ~~~~~la~~~g~~v~~ 256 (286)
T 3gi1_A 241 KIAHAIAKSTGAKVKT 256 (286)
T ss_dssp HHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHhCCeEEE
Confidence 2222456788988874
No 380
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=47.06 E-value=82 Score=26.09 Aligned_cols=58 Identities=7% Similarity=0.033 Sum_probs=41.5
Q ss_pred CCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc---CcEEEE
Q 019899 75 DNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK---NIHVIS 135 (334)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~vi~ 135 (334)
.+..+|.+.+++.++..... ++..++++ .++--+..++.+|..++++.+.+. +++||+
T Consensus 17 ~dg~iD~~~l~~lv~~li~~--Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 77 (294)
T 3b4u_A 17 TDGTVDIDAMIAHARRCLSN--GCDSVTLF-GTTGEGCSVGSRERQAILSSFIAAGIAPSRIVT 77 (294)
T ss_dssp TTSSBCHHHHHHHHHHHHHT--TCSEEEES-STTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred CCCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 45689999999998876554 45555544 444456778999999999988764 466663
No 381
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=46.86 E-value=57 Score=25.56 Aligned_cols=100 Identities=15% Similarity=0.181 Sum_probs=51.4
Q ss_pred EEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhh---ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcC
Q 019899 20 IVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRF---RTGVELIPVHCRSTDNFAFSITALDQAFNQARKRG 95 (334)
Q Consensus 20 i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~---~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~ 95 (334)
+++.+|++.++- .+...|.+.|.+|++..-........... ..+.++..+.++ --|.++++++++......
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D-----~~~~~~v~~~~~~~~~~~ 78 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLD-----VSKAESVEEFSKKVLERF 78 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECC-----TTCHHHHHHHCC-HHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEec-----cCCHHHHHHHHHHHHHhc
Confidence 455556555664 44555667887777765433222222210 235556665542 135667776665544333
Q ss_pred CceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 96 VKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 96 ~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
+++..++.+....+.+. -.+.+++++..+
T Consensus 79 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 109 (235)
T 3l77_A 79 GDVDVVVANAGLGYFKRLEELSEEEFHEMIE 109 (235)
T ss_dssp SSCSEEEECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred CCCCEEEECCccccccCcccCCHHHHHHHHH
Confidence 46775555444433333 236666666655
No 382
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=46.72 E-value=17 Score=32.43 Aligned_cols=27 Identities=30% Similarity=0.684 Sum_probs=24.8
Q ss_pred CCcccCCCHHHHHHHHHHHHhcCcEEE
Q 019899 108 NPVGNIIPRETLYELLDFAREKNIHVI 134 (334)
Q Consensus 108 nptG~~~~~~~l~~i~~~~~~~~~~vi 134 (334)
++.|..++.+|+++|++.|+++||.||
T Consensus 86 ~~~~~~YT~~di~eIv~YA~~rgI~VI 112 (442)
T 2yl5_A 86 DPNGTALTQAEVTELIEYAKSKDIGLI 112 (442)
T ss_dssp CTTCSCBCHHHHHHHHHHHHTTTCEEE
T ss_pred CCCCCCcCHHHHHHHHHHHHHcCCeee
Confidence 456778999999999999999999999
No 383
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=46.68 E-value=1.1e+02 Score=24.38 Aligned_cols=100 Identities=16% Similarity=0.129 Sum_probs=49.1
Q ss_pred cEEEecCcHHHH-HHHHHHhcCCCCeEEecCCCCCChhhhhhhc--c--CcEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 19 QIVLTAGATPAV-EILCFCLADHGNALLVPSPYYPGFDRDIRFR--T--GVELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 19 ~i~~~~g~~~~~-~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~--~--g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
.+++.+|++.++ ..+...|.+.|.+|++..-.-.......+.. . +.++..+..+ --|.+.++++++....
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D-----~~~~~~v~~~~~~~~~ 82 (260)
T 2z1n_A 8 KLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGD-----IREPGDIDRLFEKARD 82 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECC-----TTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEcc-----CCCHHHHHHHHHHHHH
Confidence 455556666666 3444556677877776543211111111101 1 3244444432 1356777777776655
Q ss_pred cCCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 94 RGVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 94 ~~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
..+ +..++.+....+.+. -.+.+++++..+
T Consensus 83 ~~g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (260)
T 2z1n_A 83 LGG-ADILVYSTGGPRPGRFMELGVEDWDESYR 114 (260)
T ss_dssp TTC-CSEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred hcC-CCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 444 775554443333222 235555555544
No 384
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=46.55 E-value=71 Score=25.94 Aligned_cols=102 Identities=11% Similarity=0.171 Sum_probs=52.2
Q ss_pred CcEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhh--ccCc---EEEEEeCCCCCCccccHHHHHHHHHHH
Q 019899 18 SQIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRF--RTGV---ELIPVHCRSTDNFAFSITALDQAFNQA 91 (334)
Q Consensus 18 ~~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~--~~g~---~v~~v~~~~~~~~~~~~~~l~~~l~~~ 91 (334)
+.+++.+|++.++- .+...|.+.|.+|++..-.-.......+. ..+. ++..+..+ --|.++++++++..
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~ 85 (281)
T 3svt_A 11 DRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTD-----ITNEDETARAVDAV 85 (281)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECC-----TTSHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCC-----CCCHHHHHHHHHHH
Confidence 34566666666664 44555667888877764332222222110 1232 55555542 23567777777665
Q ss_pred HHcCCceeEEEEeCCC-CCcc--cCCCHHHHHHHHH
Q 019899 92 RKRGVKVRGILICNPA-NPVG--NIIPRETLYELLD 124 (334)
Q Consensus 92 ~~~~~~~~~i~~~~p~-nptG--~~~~~~~l~~i~~ 124 (334)
....+++..++.+... .+.+ .-.+.+++++..+
T Consensus 86 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 121 (281)
T 3svt_A 86 TAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVD 121 (281)
T ss_dssp HHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHH
Confidence 5444467755544332 2222 2345566666555
No 385
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=46.45 E-value=37 Score=24.68 Aligned_cols=21 Identities=14% Similarity=0.123 Sum_probs=17.0
Q ss_pred HHHHHHHHHhcCcEEEEeccc
Q 019899 119 LYELLDFAREKNIHVISDEIY 139 (334)
Q Consensus 119 l~~i~~~~~~~~~~vi~D~~~ 139 (334)
-+++.+.|+++|+.++-+.+.
T Consensus 113 ~~~l~~~a~~~Gi~vvGpnc~ 133 (144)
T 2d59_A 113 NREASKKADEAGLIIVANRCM 133 (144)
T ss_dssp CHHHHHHHHHTTCEEEESCCH
T ss_pred HHHHHHHHHHcCCEEEcCCch
Confidence 367888899999999977664
No 386
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=46.41 E-value=1.3e+02 Score=27.95 Aligned_cols=98 Identities=14% Similarity=0.146 Sum_probs=51.4
Q ss_pred CcEEEecCcHHHHHHH-HHHhcCCCCeEEecCCCC-CChhhhhhhccCcEEEEEeCCCCCCccccH-HHHHHHHHHHHHc
Q 019899 18 SQIVLTAGATPAVEIL-CFCLADHGNALLVPSPYY-PGFDRDIRFRTGVELIPVHCRSTDNFAFSI-TALDQAFNQARKR 94 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~-~~~l~~~gd~vl~~~p~~-~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~-~~l~~~l~~~~~~ 94 (334)
+.+++.+|++.++=.. ...|.+.|-+|++..-.- ......+. ..|.++..+.+ |+ ++.++.++....+
T Consensus 322 gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~-~~g~~~~~~~~--------Dv~~~~~~~~~~~~~~ 392 (604)
T 2et6_A 322 DKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIK-AAGGEAWPDQH--------DVAKDSEAIIKNVIDK 392 (604)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHH-HTTCEEEEECC--------CHHHHHHHHHHHHHHH
T ss_pred CCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHH-hcCCeEEEEEc--------ChHHHHHHHHHHHHHh
Confidence 3577777877788544 445567888887754211 11112222 23555555543 45 5555555544333
Q ss_pred CCceeEEEEeCC-CCCccc--CCCHHHHHHHHHH
Q 019899 95 GVKVRGILICNP-ANPVGN--IIPRETLYELLDF 125 (334)
Q Consensus 95 ~~~~~~i~~~~p-~nptG~--~~~~~~l~~i~~~ 125 (334)
.+++. ++++|. ....+. -.+.++++++.++
T Consensus 393 ~G~iD-iLVnNAGi~~~~~~~~~~~~~~~~~~~v 425 (604)
T 2et6_A 393 YGTID-ILVNNAGILRDRSFAKMSKQEWDSVQQV 425 (604)
T ss_dssp HSCCC-EEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred cCCCC-EEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 34677 455544 222222 3466777777663
No 387
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=46.39 E-value=63 Score=26.35 Aligned_cols=102 Identities=17% Similarity=0.162 Sum_probs=51.4
Q ss_pred CcEEEecCcHHHHHHH-HHHhcCCCCeEEecCCCCCChhhhhhh---ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 18 SQIVLTAGATPAVEIL-CFCLADHGNALLVPSPYYPGFDRDIRF---RTGVELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~-~~~l~~~gd~vl~~~p~~~~~~~~~~~---~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
+.+++.+|++.++-.. ...|.+.|.+|++..-.-......... ..+..+..+.++ --|.++++++++....
T Consensus 33 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~ 107 (281)
T 4dry_A 33 GRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCD-----VGDPDQVAALFAAVRA 107 (281)
T ss_dssp -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECC-----TTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcC-----CCCHHHHHHHHHHHHH
Confidence 4577777777777444 455667787877764332222222210 112223344431 1256677777666544
Q ss_pred cCCceeEEEEeCCCC-Ccc--cCCCHHHHHHHHH
Q 019899 94 RGVKVRGILICNPAN-PVG--NIIPRETLYELLD 124 (334)
Q Consensus 94 ~~~~~~~i~~~~p~n-ptG--~~~~~~~l~~i~~ 124 (334)
..+++..++.+.... +.+ .-.+.++++++.+
T Consensus 108 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~ 141 (281)
T 4dry_A 108 EFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVA 141 (281)
T ss_dssp HHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHH
Confidence 444677555444332 212 1246666666665
No 388
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=46.24 E-value=52 Score=23.35 Aligned_cols=44 Identities=9% Similarity=0.225 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEE
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVIS 135 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~ 135 (334)
.+++.+.+++. ++..++++.|.. +.+.++++.+.|.+.|+.+.+
T Consensus 54 ~~~l~~~~~~~-----~id~viia~~~~------~~~~~~~i~~~l~~~gv~v~~ 97 (141)
T 3nkl_A 54 PKYLERLIKKH-----CISTVLLAVPSA------SQVQKKVIIESLAKLHVEVLT 97 (141)
T ss_dssp GGGHHHHHHHH-----TCCEEEECCTTS------CHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHC-----CCCEEEEeCCCC------CHHHHHHHHHHHHHcCCeEEE
Confidence 35577777765 677788887753 245689999999999988763
No 389
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=46.03 E-value=38 Score=28.60 Aligned_cols=23 Identities=30% Similarity=0.300 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHhcCcEEEEecc
Q 019899 116 RETLYELLDFAREKNIHVISDEI 138 (334)
Q Consensus 116 ~~~l~~i~~~~~~~~~~vi~D~~ 138 (334)
.+.+++++++|.++|++||+|--
T Consensus 104 ~~~ld~~v~~a~~~Gi~VilD~H 126 (327)
T 3pzt_A 104 KNKVKEAVEAAKELGIYVIIDWH 126 (327)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEec
Confidence 46789999999999999999854
No 390
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=45.74 E-value=1.1e+02 Score=24.36 Aligned_cols=102 Identities=15% Similarity=0.117 Sum_probs=52.4
Q ss_pred CcEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhh--ccC-cEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 18 SQIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRF--RTG-VELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 18 ~~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~--~~g-~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
+.+++.+|++.++- .+...|.+.|.+|++..-.-......... ..+ .++..+.++ --|.+.++++++....
T Consensus 10 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~ 84 (262)
T 3pk0_A 10 GRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTD-----VSDRAQCDALAGRAVE 84 (262)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECC-----TTSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcC-----CCCHHHHHHHHHHHHH
Confidence 34666666666664 34455667888877764332222222110 122 345555542 1256677777665544
Q ss_pred cCCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 94 RGVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 94 ~~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
+.+++..++.+....+.+. -.+.+++++..+
T Consensus 85 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 117 (262)
T 3pk0_A 85 EFGGIDVVCANAGVFPDAPLATMTPEQLNGIFA 117 (262)
T ss_dssp HHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 4457785554443333222 336566666655
No 391
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=45.74 E-value=1.2e+02 Score=24.56 Aligned_cols=101 Identities=14% Similarity=0.168 Sum_probs=52.6
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhh--ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcC
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRF--RTGVELIPVHCRSTDNFAFSITALDQAFNQARKRG 95 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~--~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~ 95 (334)
.+++.+|++.++- .+...|.+.|.+|++..-.-......... ..|.++..+.++ --|.++++++++....+.
T Consensus 33 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D-----l~d~~~v~~~~~~~~~~~ 107 (276)
T 3r1i_A 33 KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCD-----VTQPDQVRGMLDQMTGEL 107 (276)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECC-----TTCHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcC-----CCCHHHHHHHHHHHHHHc
Confidence 4566666666664 44555667887777765432222222210 234445555442 135677777776655444
Q ss_pred CceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 96 VKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 96 ~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
+++..++.+....+.+. -.+.++++++.+
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 138 (276)
T 3r1i_A 108 GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQD 138 (276)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 46785554443332222 346666666655
No 392
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=45.64 E-value=1e+02 Score=24.58 Aligned_cols=101 Identities=12% Similarity=0.063 Sum_probs=50.5
Q ss_pred cEEEecCcH-HHH-HHHHHHhcCCCCeEEecCCCCCChhhhhh---hccCcEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 19 QIVLTAGAT-PAV-EILCFCLADHGNALLVPSPYYPGFDRDIR---FRTGVELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 19 ~i~~~~g~~-~~~-~~~~~~l~~~gd~vl~~~p~~~~~~~~~~---~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
..++.+|++ .++ ..+...|.+.|.+|++..-.-........ ...+.++..+.++ --|.+.++++++....
T Consensus 23 k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D-----l~~~~~v~~~~~~~~~ 97 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCD-----VTSTEAVDALITQTVE 97 (266)
T ss_dssp CEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECC-----TTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeC-----CCCHHHHHHHHHHHHH
Confidence 344445543 334 34445566778777776433222222222 0123455555542 1256777777766554
Q ss_pred cCCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 94 RGVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 94 ~~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
..+++..++.+....+.+. -.+.+++++..+
T Consensus 98 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 130 (266)
T 3o38_A 98 KAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLN 130 (266)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HhCCCcEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 4447785555444333232 346666666555
No 393
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=45.40 E-value=1.1e+02 Score=24.20 Aligned_cols=100 Identities=17% Similarity=0.192 Sum_probs=50.9
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCC-ChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCC
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYP-GFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGV 96 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~-~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~ 96 (334)
..++.+|++.++- .+...|.+.|.+|++..-.-. .....+. ..|.++..+..+ --|.+.++++++......+
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~-~~~~~~~~~~~D-----~~~~~~v~~~~~~~~~~~g 78 (255)
T 2q2v_A 5 KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIA-RHGVKAVHHPAD-----LSDVAQIEALFALAEREFG 78 (255)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHH-TTSCCEEEECCC-----TTSHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHH-hcCCceEEEeCC-----CCCHHHHHHHHHHHHHHcC
Confidence 4556666666664 444556677877776543221 1112222 235455555542 2356777777765544334
Q ss_pred ceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 97 KVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 97 ~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
++..++.+....+.+. -.+.++++++.+
T Consensus 79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 108 (255)
T 2q2v_A 79 GVDILVNNAGIQHVAPVEQFPLESWDKIIA 108 (255)
T ss_dssp SCSEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 6775554433332222 245566665554
No 394
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=45.27 E-value=1.2e+02 Score=25.04 Aligned_cols=77 Identities=16% Similarity=0.121 Sum_probs=44.7
Q ss_pred CCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHH
Q 019899 40 HGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETL 119 (334)
Q Consensus 40 ~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l 119 (334)
++..+++..+.|.- .++ .+|.+.+.+.. .+...+...|.+.++..+.+ ++++|+.....+| .-.
T Consensus 189 ~~~~~v~~H~af~Y---f~~-~yGl~~~~~~~---~~~eps~~~l~~l~~~ik~~--~v~~If~e~~~~~-------~~~ 252 (291)
T 1pq4_A 189 PQRKFIVFHPSWAY---FAR-DYNLVQIPIEV---EGQEPSAQELKQLIDTAKEN--NLTMVFGETQFST-------KSS 252 (291)
T ss_dssp SCCEEEESSCCCHH---HHH-HTTCEEEESCB---TTBCCCHHHHHHHHHHHHTT--TCCEEEEETTSCC-------HHH
T ss_pred CCCEEEEECCchHH---HHH-HCCCEEeeccc---CCCCCCHHHHHHHHHHHHHc--CCCEEEEeCCCCh-------HHH
Confidence 46678887776553 344 78888766542 23466777777766544332 6776665433332 112
Q ss_pred HHHHHHHHhcCcEEEE
Q 019899 120 YELLDFAREKNIHVIS 135 (334)
Q Consensus 120 ~~i~~~~~~~~~~vi~ 135 (334)
+. ++++.|+.++.
T Consensus 253 ~~---ia~~~g~~v~~ 265 (291)
T 1pq4_A 253 EA---IAAEIGAGVEL 265 (291)
T ss_dssp HH---HHHHHTCEEEE
T ss_pred HH---HHHHcCCeEEE
Confidence 33 36677877764
No 395
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=45.18 E-value=92 Score=25.54 Aligned_cols=101 Identities=9% Similarity=0.060 Sum_probs=53.0
Q ss_pred CcEEEecCcHHHHHH-HHHHhcCCCCeEEecCCCCC-C----hhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHH
Q 019899 18 SQIVLTAGATPAVEI-LCFCLADHGNALLVPSPYYP-G----FDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQA 91 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~-~~~~l~~~gd~vl~~~p~~~-~----~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~ 91 (334)
+.+++.+|++.++-. +...|.+.|.+|++..-.-. . ....++ ..|.++..+.++ --|.+.++++++..
T Consensus 49 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D-----v~d~~~v~~~~~~~ 122 (294)
T 3r3s_A 49 DRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIE-ECGRKAVLLPGD-----LSDESFARSLVHKA 122 (294)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHH-HTTCCEEECCCC-----TTSHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHH-HcCCcEEEEEec-----CCCHHHHHHHHHHH
Confidence 346666666667744 44556678888776532211 1 111122 345566666542 23566777776655
Q ss_pred HHcCCceeEEEEeCCCC-Ccc--cCCCHHHHHHHHH
Q 019899 92 RKRGVKVRGILICNPAN-PVG--NIIPRETLYELLD 124 (334)
Q Consensus 92 ~~~~~~~~~i~~~~p~n-ptG--~~~~~~~l~~i~~ 124 (334)
....+++..++.+.... +.+ .-.+.+++++..+
T Consensus 123 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 158 (294)
T 3r3s_A 123 REALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFA 158 (294)
T ss_dssp HHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHH
T ss_pred HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHH
Confidence 44434777555443322 222 2346666666665
No 396
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=45.11 E-value=76 Score=26.62 Aligned_cols=59 Identities=14% Similarity=0.177 Sum_probs=42.7
Q ss_pred CCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc---CcEEEE
Q 019899 74 TDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK---NIHVIS 135 (334)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~vi~ 135 (334)
+.+..+|.+.+++.++...+. ++..++++ .++--+..++.+|.+++++.+.+. +++||+
T Consensus 35 ~~dg~iD~~~l~~li~~li~~--Gv~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 96 (315)
T 3si9_A 35 DDNGAIDEKAFCNFVEWQITQ--GINGVSPV-GTTGESPTLTHEEHKRIIELCVEQVAKRVPVVA 96 (315)
T ss_dssp CTTSCBCHHHHHHHHHHHHHT--TCSEEECS-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred CCCCCcCHHHHHHHHHHHHHc--CCCEEEeC-ccccCccccCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 345689999999998876554 45555544 444556778999999999988663 577776
No 397
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=45.10 E-value=1.1e+02 Score=24.11 Aligned_cols=101 Identities=12% Similarity=0.078 Sum_probs=50.4
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhh--ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcC
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRF--RTGVELIPVHCRSTDNFAFSITALDQAFNQARKRG 95 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~--~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~ 95 (334)
.+++.+|++.++- .+...|.+.|.+|++..-.-.......+. ..|.++..+.++ --|.+.++++++......
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D-----v~~~~~~~~~~~~~~~~~ 82 (247)
T 2jah_A 8 KVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELD-----VADRQGVDAAVASTVEAL 82 (247)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECC-----TTCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECC-----CCCHHHHHHHHHHHHHHc
Confidence 4555556666664 44555667787777654321111111110 124455555542 135667777766554433
Q ss_pred CceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 96 VKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 96 ~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
+++..++.+....+.+. -.+.++++++.+
T Consensus 83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 113 (247)
T 2jah_A 83 GGLDILVNNAGIMLLGPVEDADTTDWTRMID 113 (247)
T ss_dssp SCCSEEEECCCCCCCCCSTTCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 46775554433333332 235566666554
No 398
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=45.02 E-value=1.1e+02 Score=24.12 Aligned_cols=93 Identities=8% Similarity=0.092 Sum_probs=49.4
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
..++.+|++.++- .+...|.+.|.+|++..-.-. .. ..+...+..++ -|.++++++++......++
T Consensus 8 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~-----~~-~~~~~~~~~D~-------~d~~~~~~~~~~~~~~~g~ 74 (250)
T 2fwm_X 8 KNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFT-----QE-QYPFATEVMDV-------ADAAQVAQVCQRLLAETER 74 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCC-----SS-CCSSEEEECCT-------TCHHHHHHHHHHHHHHCSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchh-----hh-cCCceEEEcCC-------CCHHHHHHHHHHHHHHcCC
Confidence 4555556666663 445556677877776532211 12 23444444443 3567777777766554457
Q ss_pred eeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 98 VRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 98 ~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
+..++.+....+.+. -.+.+++++..+
T Consensus 75 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 103 (250)
T 2fwm_X 75 LDALVNAAGILRMGATDQLSKEDWQQTFA 103 (250)
T ss_dssp CCEEEECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 785554443332222 235566666655
No 399
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=44.77 E-value=75 Score=25.02 Aligned_cols=102 Identities=12% Similarity=0.187 Sum_probs=51.1
Q ss_pred CcEEEecCcHHHHHH-HHHHhcCCCCeEEecCCCCCChhhhhhh--cc---CcEEEEEeCCCCCCccccHHHHHHHHHHH
Q 019899 18 SQIVLTAGATPAVEI-LCFCLADHGNALLVPSPYYPGFDRDIRF--RT---GVELIPVHCRSTDNFAFSITALDQAFNQA 91 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~-~~~~l~~~gd~vl~~~p~~~~~~~~~~~--~~---g~~v~~v~~~~~~~~~~~~~~l~~~l~~~ 91 (334)
+.+++.+|++.++-. +...|.+.|.+|++..-.-......... .. ...++.++++ .-|.+.+++.++..
T Consensus 14 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d-----~~~~~~~~~~~~~~ 88 (247)
T 3i1j_A 14 GRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLE-----NATAQQYRELAARV 88 (247)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTT-----TCCHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccc-----cCCHHHHHHHHHHH
Confidence 356666666667643 4455667888877765432222221110 11 2233333331 23566777766655
Q ss_pred HHcCCceeEEEEeCCCC-Cccc--CCCHHHHHHHHH
Q 019899 92 RKRGVKVRGILICNPAN-PVGN--IIPRETLYELLD 124 (334)
Q Consensus 92 ~~~~~~~~~i~~~~p~n-ptG~--~~~~~~l~~i~~ 124 (334)
....+++..++.+.... +.+. -.+.+++++..+
T Consensus 89 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 124 (247)
T 3i1j_A 89 EHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMH 124 (247)
T ss_dssp HHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHH
T ss_pred HHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHH
Confidence 44434677555444322 2221 346566666655
No 400
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=44.75 E-value=1.3e+02 Score=24.90 Aligned_cols=101 Identities=16% Similarity=0.091 Sum_probs=52.5
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhh--ccC--cEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRF--RTG--VELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~--~~g--~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
.+++.+|++.++- .+...|.+.|.+|++..-.-......... ..+ .++..+.++ --|.+.++++++....
T Consensus 9 k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D-----l~~~~~v~~~~~~~~~ 83 (319)
T 3ioy_A 9 RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLD-----VASREGFKMAADEVEA 83 (319)
T ss_dssp CEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECC-----TTCHHHHHHHHHHHHH
T ss_pred CEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECC-----CCCHHHHHHHHHHHHH
Confidence 4555666666664 34555667888887765432222222210 112 245555542 1356777777776655
Q ss_pred cCCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 94 RGVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 94 ~~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
..+++.+++.+....+.+. -.+.++++++.+
T Consensus 84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 116 (319)
T 3ioy_A 84 RFGPVSILCNNAGVNLFQPIEESSYDDWDWLLG 116 (319)
T ss_dssp HTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 5557785554443332222 235566666655
No 401
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=44.72 E-value=90 Score=26.40 Aligned_cols=59 Identities=12% Similarity=0.098 Sum_probs=41.5
Q ss_pred CCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc---CcEEEE
Q 019899 74 TDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK---NIHVIS 135 (334)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~vi~ 135 (334)
+.+..+|.+.+++.++..... ++..++++ .++--+..++.+|.+++++.+.+. +++||+
T Consensus 47 ~~dg~iD~~~l~~lv~~li~~--Gv~Gl~v~-GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 108 (332)
T 2r8w_A 47 DEAGRVDIEAFSALIARLDAA--EVDSVGIL-GSTGIYMYLTREERRRAIEAAATILRGRRTLMA 108 (332)
T ss_dssp CTTCCBCHHHHHHHHHHHHHH--TCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 345689999999988766554 45555544 444446678999999999887653 577775
No 402
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=44.69 E-value=87 Score=28.44 Aligned_cols=104 Identities=17% Similarity=0.224 Sum_probs=58.0
Q ss_pred CCCCCcEEEecCcHHHHHHHH-HHhcCCCCe-EEec-CCCC-------------CC---hhhhhhhccCcEEEEEeCCCC
Q 019899 14 SFDPSQIVLTAGATPAVEILC-FCLADHGNA-LLVP-SPYY-------------PG---FDRDIRFRTGVELIPVHCRST 74 (334)
Q Consensus 14 ~~~~~~i~~~~g~~~~~~~~~-~~l~~~gd~-vl~~-~p~~-------------~~---~~~~~~~~~g~~v~~v~~~~~ 74 (334)
...++.+++.+|++.++-..+ ..|.+.|.+ |++. .-.- .. ....++ ..|.++..+.++
T Consensus 247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~-~~g~~v~~~~~D-- 323 (525)
T 3qp9_A 247 WWQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELA-DLGATATVVTCD-- 323 (525)
T ss_dssp SSCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHH-HHTCEEEEEECC--
T ss_pred eecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHH-hcCCEEEEEECC--
Confidence 345678888888888885554 345555654 5443 2221 11 122233 357777777753
Q ss_pred CCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 75 DNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
--|.+++.++++... +.+++..|+.+......+. -.+.++++++.+
T Consensus 324 ---vtd~~~v~~~~~~i~-~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~ 371 (525)
T 3qp9_A 324 ---LTDAEAAARLLAGVS-DAHPLSAVLHLPPTVDSEPLAATDADALARVVT 371 (525)
T ss_dssp ---TTSHHHHHHHHHTSC-TTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred ---CCCHHHHHHHHHHHH-hcCCCcEEEECCcCCCCCchhhCCHHHHHHHHH
Confidence 236778888887654 3346776665544333333 345566666655
No 403
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=44.40 E-value=1e+02 Score=24.25 Aligned_cols=100 Identities=8% Similarity=0.080 Sum_probs=48.4
Q ss_pred EEEecCcHHHH-HHHHHHhcCCCCeEEecCCCCCChhhhhhh---ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcC
Q 019899 20 IVLTAGATPAV-EILCFCLADHGNALLVPSPYYPGFDRDIRF---RTGVELIPVHCRSTDNFAFSITALDQAFNQARKRG 95 (334)
Q Consensus 20 i~~~~g~~~~~-~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~---~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~ 95 (334)
.++.+|++.++ ..+...|.+.|.+|++..-.-......... ..+.++..+..+ --|.+.++++++......
T Consensus 4 ~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D-----~~~~~~~~~~~~~~~~~~ 78 (250)
T 2cfc_A 4 VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRAD-----VADEGDVNAAIAATMEQF 78 (250)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECC-----TTCHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEec-----CCCHHHHHHHHHHHHHHh
Confidence 44555555565 344455666787777654322222211110 124445555542 235677777776554433
Q ss_pred CceeEEEEeCCCCCccc-----CCCHHHHHHHHH
Q 019899 96 VKVRGILICNPANPVGN-----IIPRETLYELLD 124 (334)
Q Consensus 96 ~~~~~i~~~~p~nptG~-----~~~~~~l~~i~~ 124 (334)
+++..++.+....+.+. ..+.+++++..+
T Consensus 79 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~ 112 (250)
T 2cfc_A 79 GAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMA 112 (250)
T ss_dssp SCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHH
Confidence 46775555443322221 234555555544
No 404
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=44.36 E-value=18 Score=31.70 Aligned_cols=27 Identities=19% Similarity=0.251 Sum_probs=24.0
Q ss_pred CHHHHHHHHHHHHhcCcEEEEeccccc
Q 019899 115 PRETLYELLDFAREKNIHVISDEIYGG 141 (334)
Q Consensus 115 ~~~~l~~i~~~~~~~~~~vi~D~~~~~ 141 (334)
+.++++++++.|+++|+.||.|-++.-
T Consensus 67 t~~d~~~lv~~~h~~Gi~VilD~V~NH 93 (405)
T 1ht6_A 67 NAAELKSLIGALHGKGVQAIADIVINH 93 (405)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSB
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCc
Confidence 467899999999999999999998653
No 405
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=44.26 E-value=1.2e+02 Score=24.10 Aligned_cols=100 Identities=17% Similarity=0.128 Sum_probs=50.9
Q ss_pred EEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhh--ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCC
Q 019899 20 IVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRF--RTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGV 96 (334)
Q Consensus 20 i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~--~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~ 96 (334)
+++.+|++.++- .+...|.+.|.+|++..-.-.......+. ..|.++..+.++ --|.++++++++......+
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D-----~~~~~~v~~~~~~~~~~~g 78 (256)
T 1geg_A 4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVD-----VSDRDQVFAAVEQARKTLG 78 (256)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECC-----TTSHHHHHHHHHHHHHHTT
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEec-----CCCHHHHHHHHHHHHHHhC
Confidence 455566666664 44455667787777654321111111110 124455555542 2356777777776555445
Q ss_pred ceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 97 KVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 97 ~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
++..++.+....+.+. -.+.++++++.+
T Consensus 79 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 108 (256)
T 1geg_A 79 GFDVIVNNAGVAPSTPIESITPEIVDKVYN 108 (256)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 7785554443333332 245566665554
No 406
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=44.23 E-value=76 Score=26.39 Aligned_cols=58 Identities=9% Similarity=0.140 Sum_probs=42.2
Q ss_pred CCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc----CcEEEE
Q 019899 75 DNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK----NIHVIS 135 (334)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~----~~~vi~ 135 (334)
.+..+|.+.+++.++..... ++..++++ .++--+..++.+|.+++++.+.+. +++||+
T Consensus 21 ~dg~iD~~~l~~lv~~li~~--Gv~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpvia 82 (301)
T 3m5v_A 21 KNGKVDEQSYARLIKRQIEN--GIDAVVPV-GTTGESATLTHEEHRTCIEIAVETCKGTKVKVLA 82 (301)
T ss_dssp ETTEECHHHHHHHHHHHHHT--TCCEEECS-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 34589999999998876554 45555544 444456778999999999988664 588886
No 407
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=44.07 E-value=1.2e+02 Score=24.26 Aligned_cols=101 Identities=11% Similarity=0.073 Sum_probs=50.9
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEec-CCCCCChhhhhhh--ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVP-SPYYPGFDRDIRF--RTGVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~-~p~~~~~~~~~~~--~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
..++.+|++.++- .+...|.+.|.+|++. ...-.......+. ..+.++..+.++ --|.++++++++.....
T Consensus 27 k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~D-----l~~~~~~~~~~~~~~~~ 101 (267)
T 4iiu_A 27 RSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFD-----VANREQCREVLEHEIAQ 101 (267)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECC-----TTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEec-----CCCHHHHHHHHHHHHHH
Confidence 4666677776764 4455566788877553 2221111111110 234455555542 13567777777655444
Q ss_pred CCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 95 GVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 95 ~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
.+++..++.+......+. -.+.+++++..+
T Consensus 102 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~ 133 (267)
T 4iiu_A 102 HGAWYGVVSNAGIARDAAFPALSNDDWDAVIH 133 (267)
T ss_dssp HCCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred hCCccEEEECCCCCCCCccccCCHHHHHHHHH
Confidence 446775554433332222 346566666554
No 408
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=44.06 E-value=28 Score=22.60 Aligned_cols=44 Identities=14% Similarity=0.194 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEe
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISD 136 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D 136 (334)
..+..+++++ ++.+++++.+-.. ++....+..+|++++++++.-
T Consensus 16 ~~~v~kai~~-----gkaklViiA~D~~-------~~~~~~i~~lc~~~~Ip~~~v 59 (82)
T 3v7e_A 16 TKQTVKALKR-----GSVKEVVVAKDAD-------PILTSSVVSLAEDQGISVSMV 59 (82)
T ss_dssp HHHHHHHHTT-----TCEEEEEEETTSC-------HHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHc-----CCeeEEEEeCCCC-------HHHHHHHHHHHHHcCCCEEEE
Confidence 4566777765 3788777775443 345888999999999999854
No 409
>2j9r_A Thymidine kinase; TK1, DNK, lasso, transferase, ATP-binding, deoxyribonucleoside kinase, DNA synthesis, phosphate accept nucleotide-binding; HET: THM; 2.7A {Bacillus anthracis} PDB: 2ja1_A*
Probab=43.81 E-value=20 Score=28.37 Aligned_cols=117 Identities=11% Similarity=0.129 Sum_probs=59.7
Q ss_pred CcEEEecCc------HHHHHHHHHHhcCCCCeEEecCCCCCCh---hhhhhhccCcEEEEEeCCCCCCccccHHHHHHHH
Q 019899 18 SQIVLTAGA------TPAVEILCFCLADHGNALLVPSPYYPGF---DRDIRFRTGVELIPVHCRSTDNFAFSITALDQAF 88 (334)
Q Consensus 18 ~~i~~~~g~------~~~~~~~~~~l~~~gd~vl~~~p~~~~~---~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l 88 (334)
..+.+..|. |+++..+... ...|.+|++..|.-..- ..... ..|.++..+++.+. +++.+.+
T Consensus 28 G~l~vitG~MgsGKTT~lL~~a~r~-~~~g~kVli~k~~~d~R~ge~~i~s-~~g~~~~a~~~~~~-------~~~~~~~ 98 (214)
T 2j9r_A 28 GWIEVICGSMFSGKSEELIRRVRRT-QFAKQHAIVFKPCIDNRYSEEDVVS-HNGLKVKAVPVSAS-------KDIFKHI 98 (214)
T ss_dssp CEEEEEECSTTSCHHHHHHHHHHHH-HHTTCCEEEEECC------------------CCEEECSSG-------GGGGGGC
T ss_pred CEEEEEECCCCCcHHHHHHHHHHHH-HHCCCEEEEEEeccCCcchHHHHHh-hcCCeeEEeecCCH-------HHHHHHH
Confidence 456554444 4555555544 45677888877654421 22344 45666655554221 2222222
Q ss_pred HHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhh
Q 019899 89 NQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILE 157 (334)
Q Consensus 89 ~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~ 157 (334)
.. ++.+|++...+. ++.+.++.+..++. .|+.||+=.--.+ |.+..+.....+.+
T Consensus 99 ~~------~~dvViIDEaQF-----~~~~~V~~l~~l~~-~~~~Vi~~Gl~~D--F~~~~F~~~~~Ll~ 153 (214)
T 2j9r_A 99 TE------EMDVIAIDEVQF-----FDGDIVEVVQVLAN-RGYRVIVAGLDQD--FRGLPFGQVPQLMA 153 (214)
T ss_dssp CS------SCCEEEECCGGG-----SCTTHHHHHHHHHH-TTCEEEEEECSBC--TTSCBCTTHHHHHH
T ss_pred hc------CCCEEEEECccc-----CCHHHHHHHHHHhh-CCCEEEEEecccc--cccCccccHHHHHH
Confidence 21 477888887776 66777766665555 5999997554333 44566666655554
No 410
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=43.79 E-value=49 Score=27.28 Aligned_cols=60 Identities=20% Similarity=0.201 Sum_probs=37.5
Q ss_pred cccHHHHHHHHHHHHHcCCc-eeEEEEeCC----------CCCcccCC---CHHHHHHHHHHHHhcCcEEEEecc
Q 019899 78 AFSITALDQAFNQARKRGVK-VRGILICNP----------ANPVGNII---PRETLYELLDFAREKNIHVISDEI 138 (334)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~~~-~~~i~~~~p----------~nptG~~~---~~~~l~~i~~~~~~~~~~vi~D~~ 138 (334)
..+.+.+++.|+..+..|-+ +| +.+..- ..++|... -.+.++.++++|.++|++||.|--
T Consensus 38 ~~~~~~~~~~l~~~k~~G~N~vR-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~Gi~vil~~~ 111 (351)
T 3vup_A 38 QRNKNRIEPEFKKLHDAGGNSMR-LWIHIQGETTPAFNDQGFVTGPDKQGTMLDDMKDLLDTAKKYNILVFPCLW 111 (351)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEE-EEEEETTSSSSEECTTSCEEESCSSSCHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHcCCcEEE-ECcccccccCcccccccccccccccHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 45667778777777766655 44 443211 11112222 135679999999999999998753
No 411
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=43.78 E-value=1.2e+02 Score=24.23 Aligned_cols=102 Identities=15% Similarity=0.190 Sum_probs=53.8
Q ss_pred CCcEEEecCcHHHHHHH-HHHhcCCCCeEEec-CCCCCChh---hhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHH
Q 019899 17 PSQIVLTAGATPAVEIL-CFCLADHGNALLVP-SPYYPGFD---RDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQA 91 (334)
Q Consensus 17 ~~~i~~~~g~~~~~~~~-~~~l~~~gd~vl~~-~p~~~~~~---~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~ 91 (334)
...+++.+|++.++-.. ...|.+.|.+|++. ...-.... ..+. ..+.++..+.++ --|.++++++++..
T Consensus 25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D-----l~~~~~v~~~~~~~ 98 (272)
T 4e3z_A 25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAIT-ESGGEAVAIPGD-----VGNAADIAAMFSAV 98 (272)
T ss_dssp CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH-HTTCEEEEEECC-----TTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHH-hcCCcEEEEEcC-----CCCHHHHHHHHHHH
Confidence 34577777777777444 45566788877654 32211111 1222 245566666652 23567777777665
Q ss_pred HHcCCceeEEEEeCCCCCc-cc--CCCHHHHHHHHH
Q 019899 92 RKRGVKVRGILICNPANPV-GN--IIPRETLYELLD 124 (334)
Q Consensus 92 ~~~~~~~~~i~~~~p~npt-G~--~~~~~~l~~i~~ 124 (334)
....+++..++.+...... +. -.+.+++++..+
T Consensus 99 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~ 134 (272)
T 4e3z_A 99 DRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLR 134 (272)
T ss_dssp HHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHh
Confidence 4443467755544433221 21 235566665554
No 412
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=43.52 E-value=90 Score=25.81 Aligned_cols=58 Identities=17% Similarity=0.277 Sum_probs=40.7
Q ss_pred CCccccHHHHHHHHHHHHH-cCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHh---cCcEEEE
Q 019899 75 DNFAFSITALDQAFNQARK-RGVKVRGILICNPANPVGNIIPRETLYELLDFARE---KNIHVIS 135 (334)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~-~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~---~~~~vi~ 135 (334)
.+..+|.+.+++.++.... . ++..++++ .++--+..++.+|..++++.+.+ .+++||+
T Consensus 17 ~dg~iD~~~l~~lv~~li~~~--Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 78 (293)
T 1f6k_A 17 EDGTINEKGLRQIIRHNIDKM--KVDGLYVG-GSTGENFMLSTEEKKEIFRIAKDEAKDQIALIA 78 (293)
T ss_dssp TTSCBCHHHHHHHHHHHHHTS--CCSEEEES-SGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHhhC--CCcEEEeC-ccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 4568999999999887655 4 35545544 33334567899999999888765 3577774
No 413
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=43.47 E-value=41 Score=31.23 Aligned_cols=26 Identities=19% Similarity=0.310 Sum_probs=23.7
Q ss_pred CHHHHHHHHHHHHhcCcEEEEecccc
Q 019899 115 PRETLYELLDFAREKNIHVISDEIYG 140 (334)
Q Consensus 115 ~~~~l~~i~~~~~~~~~~vi~D~~~~ 140 (334)
+.++++++++.|+++|+.||+|-++-
T Consensus 207 t~~dfk~Lv~~aH~~GI~VilD~V~N 232 (599)
T 3bc9_A 207 TKGELENAIDALHNNDIKVYFDAVLN 232 (599)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 57899999999999999999998864
No 414
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=43.42 E-value=62 Score=26.48 Aligned_cols=76 Identities=9% Similarity=0.071 Sum_probs=42.4
Q ss_pred cEEEecCcHHHH-HHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 19 QIVLTAGATPAV-EILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 19 ~i~~~~g~~~~~-~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
.+++.+|++.++ ..+...|.+.|.+|++..-.-........ ..+.++..+.++ --|.+.++++++.. .+
T Consensus 17 k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D-----l~d~~~v~~~~~~~----~~ 86 (291)
T 3rd5_A 17 RTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAAR-TMAGQVEVRELD-----LQDLSSVRRFADGV----SG 86 (291)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT-TSSSEEEEEECC-----TTCHHHHHHHHHTC----CC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-HhcCCeeEEEcC-----CCCHHHHHHHHHhc----CC
Confidence 455555666666 44455566788888776543333333333 345566666542 23667777777653 35
Q ss_pred eeEEEEe
Q 019899 98 VRGILIC 104 (334)
Q Consensus 98 ~~~i~~~ 104 (334)
+..++.+
T Consensus 87 iD~lv~n 93 (291)
T 3rd5_A 87 ADVLINN 93 (291)
T ss_dssp EEEEEEC
T ss_pred CCEEEEC
Confidence 6744443
No 415
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=43.22 E-value=1.2e+02 Score=23.73 Aligned_cols=99 Identities=13% Similarity=0.137 Sum_probs=50.6
Q ss_pred EEEecCcHHHH-HHHHHHhcCCCCeEEec-CCCCCChhhh---hhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 20 IVLTAGATPAV-EILCFCLADHGNALLVP-SPYYPGFDRD---IRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 20 i~~~~g~~~~~-~~~~~~l~~~gd~vl~~-~p~~~~~~~~---~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
.++.+|++.++ ..+...|.+.|.+|++. .-.-...... ++ ..+.++..+..+ --|.+.++++++.....
T Consensus 3 ~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D-----~~~~~~~~~~~~~~~~~ 76 (244)
T 1edo_A 3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIE-AYGGQAITFGGD-----VSKEADVEAMMKTAIDA 76 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH-HHTCEEEEEECC-----TTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH-hcCCcEEEEeCC-----CCCHHHHHHHHHHHHHH
Confidence 45566666666 34455566778777763 3221111111 12 234456666542 23567777777765554
Q ss_pred CCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 95 GVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 95 ~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
.+++..++.+......+. ..+.+++++..+
T Consensus 77 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 108 (244)
T 1edo_A 77 WGTIDVVVNNAGITRDTLLIRMKKSQWDEVID 108 (244)
T ss_dssp SSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCcCcccCCHHHHHHHHH
Confidence 456786655443332221 245555555544
No 416
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=43.17 E-value=1.3e+02 Score=24.15 Aligned_cols=101 Identities=10% Similarity=0.089 Sum_probs=53.0
Q ss_pred CcEEEecCcHHHHHH-HHHHhcCCCCeEEecCCCCCCh-hh---hhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHH
Q 019899 18 SQIVLTAGATPAVEI-LCFCLADHGNALLVPSPYYPGF-DR---DIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQAR 92 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~-~~~~l~~~gd~vl~~~p~~~~~-~~---~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~ 92 (334)
..+++.+|++.++-. +...|.+.|.+|++..-.-... .. ... ..+.++..+.++ --|.+.++++++...
T Consensus 25 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D-----l~~~~~v~~~~~~~~ 98 (269)
T 3gk3_A 25 KRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHER-DAGRDFKAYAVD-----VADFESCERCAEKVL 98 (269)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHH-TTTCCCEEEECC-----TTCHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHH-hcCCceEEEEec-----CCCHHHHHHHHHHHH
Confidence 457777777777744 4556677888777654221111 11 112 234445555542 135667777766554
Q ss_pred HcCCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 93 KRGVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 93 ~~~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
...+++..++.+......+. -.+.+++++..+
T Consensus 99 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~ 132 (269)
T 3gk3_A 99 ADFGKVDVLINNAGITRDATFMKMTKGDWDAVMR 132 (269)
T ss_dssp HHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHH
Confidence 44346775555444333232 235556665554
No 417
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=43.14 E-value=19 Score=31.92 Aligned_cols=26 Identities=31% Similarity=0.455 Sum_probs=23.7
Q ss_pred CHHHHHHHHHHHHhcCcEEEEecccc
Q 019899 115 PRETLYELLDFAREKNIHVISDEIYG 140 (334)
Q Consensus 115 ~~~~l~~i~~~~~~~~~~vi~D~~~~ 140 (334)
+.++++++++.|+++|+.||+|-++-
T Consensus 85 t~~df~~lv~~~H~~Gi~VilD~V~N 110 (435)
T 1mxg_A 85 SKEELVRLIQTAHAYGIKVIADVVIN 110 (435)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 47899999999999999999998864
No 418
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=43.11 E-value=19 Score=32.39 Aligned_cols=26 Identities=15% Similarity=0.290 Sum_probs=23.8
Q ss_pred CHHHHHHHHHHHHhcCcEEEEecccc
Q 019899 115 PRETLYELLDFAREKNIHVISDEIYG 140 (334)
Q Consensus 115 ~~~~l~~i~~~~~~~~~~vi~D~~~~ 140 (334)
+.++++++++.|+++|+.||+|-++-
T Consensus 79 t~~df~~lv~~aH~~Gi~VilD~V~N 104 (480)
T 1ud2_A 79 TKAQLERAIGSLKSNDINVYGDVVMN 104 (480)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 47899999999999999999998864
No 419
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=42.90 E-value=1.3e+02 Score=24.27 Aligned_cols=100 Identities=15% Similarity=0.165 Sum_probs=51.2
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCCh----hhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGF----DRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~----~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
.+++.+|++.++- .+...|.+.|.+|++..-.-... ...+. ..|.++..+.++ --|.++++++++....
T Consensus 30 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D-----~~~~~~~~~~~~~~~~ 103 (283)
T 1g0o_A 30 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIK-KNGSDAACVKAN-----VGVVEDIVRMFEEAVK 103 (283)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH-HTTCCEEEEECC-----TTCHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH-HhCCCeEEEEcC-----CCCHHHHHHHHHHHHH
Confidence 4677777777774 44555667787777653221111 11122 235556555542 1255666666665443
Q ss_pred cCCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 94 RGVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 94 ~~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
.-+++..++.+......+. -.+.+++++..+
T Consensus 104 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 136 (283)
T 1g0o_A 104 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFT 136 (283)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 3346775554433322222 235566666555
No 420
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=42.81 E-value=19 Score=32.76 Aligned_cols=27 Identities=11% Similarity=0.309 Sum_probs=24.1
Q ss_pred CHHHHHHHHHHHHhcCcEEEEeccccc
Q 019899 115 PRETLYELLDFAREKNIHVISDEIYGG 141 (334)
Q Consensus 115 ~~~~l~~i~~~~~~~~~~vi~D~~~~~ 141 (334)
+.++++++++.|+++||.||+|-++.-
T Consensus 80 t~~dfk~Lv~~aH~~Gi~VilD~V~NH 106 (515)
T 1hvx_A 80 TKAQYLQAIQAAHAAGMQVYADVVFDH 106 (515)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecCC
Confidence 478999999999999999999988643
No 421
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=42.76 E-value=1e+02 Score=24.83 Aligned_cols=101 Identities=11% Similarity=0.097 Sum_probs=53.1
Q ss_pred CcEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCC-CChh---hhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHH
Q 019899 18 SQIVLTAGATPAVE-ILCFCLADHGNALLVPSPYY-PGFD---RDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQAR 92 (334)
Q Consensus 18 ~~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~-~~~~---~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~ 92 (334)
+.+++.+|++.++- .+...|.+.|.+|++..-.- .... ..++ ..|.++..+..+ --|.+++++++++..
T Consensus 31 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~D-----v~d~~~v~~~~~~~~ 104 (271)
T 3v2g_A 31 GKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIE-QAGGRAVAIRAD-----NRDAEAIEQAIRETV 104 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH-HTTCCEEEEECC-----TTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH-hcCCcEEEEECC-----CCCHHHHHHHHHHHH
Confidence 34566666666664 44555667888777652211 1111 1222 235566666642 235677777777655
Q ss_pred HcCCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 93 KRGVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 93 ~~~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
...+++..++.+......+. -.+.+++++..+
T Consensus 105 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 138 (271)
T 3v2g_A 105 EALGGLDILVNSAGIWHSAPLEETTVADFDEVMA 138 (271)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 44447775554433322222 346666666665
No 422
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=42.73 E-value=75 Score=26.66 Aligned_cols=59 Identities=10% Similarity=0.098 Sum_probs=41.0
Q ss_pred CCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc---CcEEEE
Q 019899 74 TDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK---NIHVIS 135 (334)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~vi~ 135 (334)
+.+..+|.+.+++.++..... ++..++++ .++--+..++.+|.+++++.+.+. +++||+
T Consensus 36 ~~dg~iD~~~l~~lv~~li~~--Gv~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 97 (314)
T 3qze_A 36 DAQGRLDWDSLAKLVDFHLQE--GTNAIVAV-GTTGESATLDVEEHIQVIRRVVDQVKGRIPVIA 97 (314)
T ss_dssp CTTSCBCHHHHHHHHHHHHHH--TCCEEEES-SGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 345689999999988765544 45555544 344446678999999999887653 577776
No 423
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=42.65 E-value=16 Score=32.38 Aligned_cols=27 Identities=30% Similarity=0.701 Sum_probs=24.6
Q ss_pred CCcccCCCHHHHHHHHHHHHhcCcEEE
Q 019899 108 NPVGNIIPRETLYELLDFAREKNIHVI 134 (334)
Q Consensus 108 nptG~~~~~~~l~~i~~~~~~~~~~vi 134 (334)
.|.|..++.+|+++|++.|+++||-||
T Consensus 83 ~~~~~~YT~~di~eIv~YA~~rgI~VI 109 (434)
T 2yl6_A 83 DPNGNHLTESQMTDLINYAKDKGIGLI 109 (434)
T ss_dssp CTTCSCEEHHHHHHHHHHHHHTTCEEE
T ss_pred CCCCCccCHHHHHHHHHHHHHcCCEEE
Confidence 356778999999999999999999999
No 424
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=42.56 E-value=1.3e+02 Score=23.99 Aligned_cols=100 Identities=10% Similarity=0.017 Sum_probs=48.3
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
..++.+|++.++- .+...|.+.|.+|++..-.-........ ....++..+.++ --|.+.++++++......++
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D-----~~d~~~v~~~~~~~~~~~g~ 86 (263)
T 3ak4_A 13 RKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVA-GLENGGFAVEVD-----VTKRASVDAAMQKAIDALGG 86 (263)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TCTTCCEEEECC-----TTCHHHHHHHHHHHHHHHTC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCCeEEEEe-----CCCHHHHHHHHHHHHHHcCC
Confidence 4555556666663 4455566778777765432111222222 221123333331 12566777776655443346
Q ss_pred eeEEEEeCCCCCcc--cCCCHHHHHHHHH
Q 019899 98 VRGILICNPANPVG--NIIPRETLYELLD 124 (334)
Q Consensus 98 ~~~i~~~~p~nptG--~~~~~~~l~~i~~ 124 (334)
+..++.+....+.+ .-.+.+++++..+
T Consensus 87 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 115 (263)
T 3ak4_A 87 FDLLCANAGVSTMRPAVDITDEEWDFNFD 115 (263)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 77555443332222 2245556665554
No 425
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=42.46 E-value=1.3e+02 Score=24.23 Aligned_cols=101 Identities=13% Similarity=0.148 Sum_probs=48.1
Q ss_pred cEEEecCcHHHH-HHHHHHhcCCCCeEEecCCCCCChhhhhhh--ccC--cEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 19 QIVLTAGATPAV-EILCFCLADHGNALLVPSPYYPGFDRDIRF--RTG--VELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 19 ~i~~~~g~~~~~-~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~--~~g--~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
..++.+|++.++ ..+...|.+.|.+|++..-.-......... ..| ..+..+..+ --|.+.++++++....
T Consensus 33 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D-----l~~~~~v~~~~~~~~~ 107 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCD-----LSNEEDILSMFSAIRS 107 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECC-----TTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEec-----CCCHHHHHHHHHHHHH
Confidence 455556666666 344455666787777654321111111110 122 345445432 2356677776665443
Q ss_pred cCCceeEEEEeCCCCCcccC--CCHHHHHHHHH
Q 019899 94 RGVKVRGILICNPANPVGNI--IPRETLYELLD 124 (334)
Q Consensus 94 ~~~~~~~i~~~~p~nptG~~--~~~~~l~~i~~ 124 (334)
..+++.+++.+....+.+.. .+.+++++..+
T Consensus 108 ~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 140 (279)
T 1xg5_A 108 QHSGVDICINNAGLARPDTLLSGSTSGWKDMFN 140 (279)
T ss_dssp HHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 33467755554443332222 34555555444
No 426
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Probab=42.32 E-value=51 Score=30.81 Aligned_cols=60 Identities=15% Similarity=0.154 Sum_probs=39.5
Q ss_pred ccHHHHHHHHHHHHHcCCceeEEEEeCC-CCCcc-----c-----------CCCHHHHHHHHHHHHhcCcEEEEecccc
Q 019899 79 FSITALDQAFNQARKRGVKVRGILICNP-ANPVG-----N-----------IIPRETLYELLDFAREKNIHVISDEIYG 140 (334)
Q Consensus 79 ~~~~~l~~~l~~~~~~~~~~~~i~~~~p-~nptG-----~-----------~~~~~~l~~i~~~~~~~~~~vi~D~~~~ 140 (334)
-|+..+.+.+.-.+.- ++.+|+++-+ .+|.| . .-+.++++++++-|+++||.||+|-++.
T Consensus 110 Gdl~gi~~~LdyL~~L--Gv~~I~L~Pi~~~~~~~~~~GY~v~dy~~vdp~~Gt~~d~~~Lv~~ah~~GI~VilD~V~N 186 (628)
T 1g5a_A 110 GDLKGLKDKIPYFQEL--GLTYLHLMPLFKCPEGKSDGGYAVSSYRDVNPALGTIGDLREVIAALHEAGISAVVDFIFN 186 (628)
T ss_dssp SSHHHHHTTHHHHHHH--TCSEEEECCCBCCCSSCSTTTTSCSCSSSBCTTTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCHHHHHHHHHHHHHc--CCCEEEeCCCCCCCCCCCCCCcCCcccCCcCccCCCHHHHHHHHHHHHHCCCEEEEEEecC
Confidence 3566665544322222 5677777644 33432 1 1157899999999999999999998864
No 427
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=41.93 E-value=56 Score=25.46 Aligned_cols=37 Identities=19% Similarity=0.426 Sum_probs=29.7
Q ss_pred CCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEE
Q 019899 95 GVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVI 134 (334)
Q Consensus 95 ~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi 134 (334)
|-.+.++++.-..|+.|.-.. +.++.+++++||+.++
T Consensus 157 Gl~Pa~vicEi~~~~dG~mar---~~~l~~fA~~h~l~ii 193 (204)
T 1tks_A 157 GLQPAGVICELVRDEDGLMMR---LDDCIQFGKKHGIKII 193 (204)
T ss_dssp TSCSBEEEEEBBCTTTCCBCB---HHHHHHHHHHHTCCEE
T ss_pred CCCceEEEEEEeECCCCCcCC---HHHHHHHHHHcCCcEE
Confidence 446776776666688899998 8888888999999988
No 428
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=41.88 E-value=80 Score=26.43 Aligned_cols=59 Identities=12% Similarity=0.239 Sum_probs=39.6
Q ss_pred CCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc---CcEEEE
Q 019899 74 TDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK---NIHVIS 135 (334)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~vi~ 135 (334)
+.+..+|.+.+++.++..... ++..++++ .++--+..++.+|.+++++.+.+. +++||+
T Consensus 20 ~~dg~iD~~~l~~lv~~li~~--Gv~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpVia 81 (311)
T 3h5d_A 20 HEDGSINFDAIPALIEHLLAH--HTDGILLA-GTTAESPTLTHDEELELFAAVQKVVNGRVPLIA 81 (311)
T ss_dssp CTTSSBCTTHHHHHHHHHHHT--TCCCEEES-STTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEE
T ss_pred CCCCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 345578999999888766554 34544444 344446678888888888887664 567765
No 429
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=41.80 E-value=65 Score=27.04 Aligned_cols=59 Identities=15% Similarity=0.219 Sum_probs=42.0
Q ss_pred CCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc---CcEEEE
Q 019899 74 TDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK---NIHVIS 135 (334)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~vi~ 135 (334)
+.+..+|.+.+++.++..... ++..++++ .++--+..++.+|.+++++.+.+. +++||+
T Consensus 37 ~~dg~iD~~~l~~lv~~li~~--Gv~Gi~v~-GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 98 (315)
T 3na8_A 37 AADGGLDLPALGRSIERLIDG--GVHAIAPL-GSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIV 98 (315)
T ss_dssp CTTSSBCHHHHHHHHHHHHHT--TCSEEECS-SGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred CCCCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 345689999999998876554 45555544 344445678999999999988653 577775
No 430
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=41.74 E-value=1.3e+02 Score=23.71 Aligned_cols=101 Identities=12% Similarity=0.021 Sum_probs=50.5
Q ss_pred cEEEecCcHHHH-HHHHHHhcCCCCeEEecCCC-CCChhhhhhh--ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 19 QIVLTAGATPAV-EILCFCLADHGNALLVPSPY-YPGFDRDIRF--RTGVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 19 ~i~~~~g~~~~~-~~~~~~l~~~gd~vl~~~p~-~~~~~~~~~~--~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
..++.+|++.++ ..+...|.+.|.+|++..-. -......... ..+.++..+..+ --|.+.++++++.....
T Consensus 8 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D-----~~~~~~~~~~~~~~~~~ 82 (258)
T 3afn_B 8 KRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAAD-----LATSEACQQLVDEFVAK 82 (258)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECC-----TTSHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECC-----CCCHHHHHHHHHHHHHH
Confidence 455566666666 34445566678777765433 2222222110 225556666542 23567777777655443
Q ss_pred CCceeEEEEeCCC-CCccc--CCCHHHHHHHHH
Q 019899 95 GVKVRGILICNPA-NPVGN--IIPRETLYELLD 124 (334)
Q Consensus 95 ~~~~~~i~~~~p~-nptG~--~~~~~~l~~i~~ 124 (334)
.+++..++.+... .+.+. -.+.+++++..+
T Consensus 83 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~ 115 (258)
T 3afn_B 83 FGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMD 115 (258)
T ss_dssp HSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCcCCcCccccCCHHHHHHHHH
Confidence 3467756554433 32222 234455555444
No 431
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=41.63 E-value=1.4e+02 Score=25.53 Aligned_cols=59 Identities=17% Similarity=0.272 Sum_probs=42.4
Q ss_pred CCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc---CcEEEE
Q 019899 74 TDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK---NIHVIS 135 (334)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~vi~ 135 (334)
+.+..+|.+.+++.++..... ++..++++ .++--+..++.+|.+++++.+.+. +++||+
T Consensus 72 ~~dg~ID~~al~~lv~~li~~--Gv~Gl~v~-GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 133 (360)
T 4dpp_A 72 LPDGRFDLEAYDDLVNIQIQN--GAEGVIVG-GTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIG 133 (360)
T ss_dssp CTTSSBCHHHHHHHHHHHHHT--TCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCCcCHHHHHHHHHHHHHc--CCCEEEec-ccccChhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 455689999999998876554 45656554 344445778999999999877653 578876
No 432
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=41.59 E-value=1.1e+02 Score=24.32 Aligned_cols=81 Identities=14% Similarity=0.238 Sum_probs=42.5
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhh--ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc-
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRF--RTGVELIPVHCRSTDNFAFSITALDQAFNQARKR- 94 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~--~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~- 94 (334)
.+++.+|++.++- .+...|.+.|.+|++..-.-......... ..|.++..+.++ --|.++++++++.....
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~~ 80 (260)
T 2qq5_A 6 QVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCD-----SSQESEVRSLFEQVDREQ 80 (260)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECC-----TTSHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECC-----CCCHHHHHHHHHHHHHhc
Confidence 4666667776774 44555667888877654321111111110 125456666542 23567777777655432
Q ss_pred CCceeEEEEe
Q 019899 95 GVKVRGILIC 104 (334)
Q Consensus 95 ~~~~~~i~~~ 104 (334)
.+++..++.+
T Consensus 81 ~g~id~lvnn 90 (260)
T 2qq5_A 81 QGRLDVLVNN 90 (260)
T ss_dssp TTCCCEEEEC
T ss_pred CCCceEEEEC
Confidence 3467755443
No 433
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=41.47 E-value=95 Score=26.94 Aligned_cols=56 Identities=16% Similarity=0.154 Sum_probs=32.8
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCccc-CCCHHHHHHHHHHHHhcCcEEEEecc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGN-IIPRETLYELLDFAREKNIHVISDEI 138 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~-~~~~~~l~~i~~~~~~~~~~vi~D~~ 138 (334)
+.++..+.|+...+. +.+-|+.+- +.|-+. ..-.+++++++++|++.|+-+++|=.
T Consensus 39 ~~~~~~~Yi~~a~~~--Gf~~IFTSL-~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DVs 95 (385)
T 1x7f_A 39 TKEKDMAYISAAARH--GFSRIFTCL-LSVNRPKEEIVAEFKEIINHAKDNNMEVILDVA 95 (385)
T ss_dssp CHHHHHHHHHHHHTT--TEEEEEEEE-CCC--------HHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHC--CCCEEEccC-CccCCChHHHHHHHHHHHHHHHHCCCEEEEECC
Confidence 455555666655433 444454443 222221 12246799999999999999999954
No 434
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=41.18 E-value=89 Score=25.68 Aligned_cols=78 Identities=12% Similarity=0.108 Sum_probs=45.2
Q ss_pred EEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHH
Q 019899 44 LLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELL 123 (334)
Q Consensus 44 vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~ 123 (334)
+++.++.|. ..++ .+|.+.+.+.-. ..+...+...+.+.++..+.+ ++++|+.. ++ ++..-.+.|.
T Consensus 166 ~vt~H~af~---Y~~~-~yGl~~~~~~~~-~~~~eps~~~l~~l~~~ik~~--~v~~if~e-~~------~~~~~~~~l~ 231 (282)
T 3mfq_A 166 LVTPHDAFN---YFAA-SYDFTLYAPQGV-STDSEVANSDMIETVNLIIDH--NIKAIFTE-ST------TNPERMKKLQ 231 (282)
T ss_dssp EECSSSCCH---HHHH-HTTCEEECSSCS-SSCSCCCHHHHHHHHHHHHHH--TCCEEECB-TT------SCTHHHHHHH
T ss_pred EEEECchHH---HHHH-HCCCeEeccccc-CCCCCCCHHHHHHHHHHHHHc--CCCEEEEe-CC------CChHHHHHHH
Confidence 444455544 4445 788887754311 233355666666655433322 77866654 43 2344478888
Q ss_pred HHHHhcCcEEEE
Q 019899 124 DFAREKNIHVIS 135 (334)
Q Consensus 124 ~~~~~~~~~vi~ 135 (334)
+.+++.|+.+++
T Consensus 232 ~~a~~~g~~v~~ 243 (282)
T 3mfq_A 232 EAVKAKGGQVEV 243 (282)
T ss_dssp HHHHTTSCCCEE
T ss_pred HHHHhcCCceEE
Confidence 889999987654
No 435
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=41.08 E-value=43 Score=31.74 Aligned_cols=61 Identities=10% Similarity=0.133 Sum_probs=41.1
Q ss_pred cccHHHHHHHHHHHHHcCCceeEEEEeCC-CCCccc-------------CCCHHHHHHHHHHHHhcCcEEEEecccc
Q 019899 78 AFSITALDQAFNQARKRGVKVRGILICNP-ANPVGN-------------IIPRETLYELLDFAREKNIHVISDEIYG 140 (334)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~~~~~~i~~~~p-~nptG~-------------~~~~~~l~~i~~~~~~~~~~vi~D~~~~ 140 (334)
.-|+..+.+.|.-.+.- ++.+|+++-. .+|+.. .=+.++++++++-|+++|+.||+|-++.
T Consensus 261 gGdl~Gi~~kLdyLk~L--Gvt~IwL~Pi~~s~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~V~N 335 (696)
T 4aee_A 261 GGDLAGIMKHIDHLEDL--GVETIYLTPIFSSTSYHRYDTIDYKSIDKYLGTMEDFEKLVQVLHSRKIKIVLDITMH 335 (696)
T ss_dssp CCCHHHHHTTHHHHHHH--TCCEEEECCCEEESSSSCCSEEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred CcCHHHHHHHhHHHHHc--CCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEecccc
Confidence 34677776655433322 5777777643 222211 2267899999999999999999998864
No 436
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=41.01 E-value=17 Score=23.86 Aligned_cols=20 Identities=25% Similarity=0.312 Sum_probs=17.8
Q ss_pred HHHHHHHHHhcCcEEEEecc
Q 019899 119 LYELLDFAREKNIHVISDEI 138 (334)
Q Consensus 119 l~~i~~~~~~~~~~vi~D~~ 138 (334)
-.+|.++++++|++++.|-.
T Consensus 29 A~~I~~~A~e~~VPi~e~~~ 48 (83)
T 3bzy_B 29 ALQIIKLAELYDIPVIEDIP 48 (83)
T ss_dssp HHHHHHHHHHTTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 68899999999999999964
No 437
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=40.63 E-value=21 Score=31.95 Aligned_cols=27 Identities=15% Similarity=0.207 Sum_probs=24.3
Q ss_pred CHHHHHHHHHHHHhcCcEEEEeccccc
Q 019899 115 PRETLYELLDFAREKNIHVISDEIYGG 141 (334)
Q Consensus 115 ~~~~l~~i~~~~~~~~~~vi~D~~~~~ 141 (334)
+.++++++++.|+++|+.||+|-++.-
T Consensus 96 t~~df~~lv~~~H~~Gi~VilD~V~NH 122 (478)
T 2guy_A 96 TADDLKALSSALHERGMYLMVDVVANH 122 (478)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSB
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECccc
Confidence 578999999999999999999998753
No 438
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=40.60 E-value=21 Score=32.52 Aligned_cols=26 Identities=23% Similarity=0.388 Sum_probs=24.1
Q ss_pred CHHHHHHHHHHHHhcCcEEEEecccc
Q 019899 115 PRETLYELLDFAREKNIHVISDEIYG 140 (334)
Q Consensus 115 ~~~~l~~i~~~~~~~~~~vi~D~~~~ 140 (334)
+.++++++++-|+++||.||.|-++.
T Consensus 78 t~~dfk~Lv~~aH~~Gi~VilD~V~N 103 (549)
T 4aie_A 78 TMADMDELISKAKEHHIKIVMDLVVN 103 (549)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 67899999999999999999999874
No 439
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=40.59 E-value=1.5e+02 Score=24.14 Aligned_cols=101 Identities=10% Similarity=0.134 Sum_probs=51.6
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhh---ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRF---RTGVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~---~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
..++.+|++.++- .+...|.+.|.+|++..-.-......... ..+.++..+..+ --|.+.++++++.....
T Consensus 27 k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D-----l~~~~~~~~~~~~~~~~ 101 (302)
T 1w6u_A 27 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCD-----VRDPDMVQNTVSELIKV 101 (302)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECC-----TTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeC-----CCCHHHHHHHHHHHHHH
Confidence 4555556665663 44555667787777664332222111110 114455555542 23567788777766555
Q ss_pred CCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 95 GVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 95 ~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
.+++.+++.+......+. ..+.+++++..+
T Consensus 102 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 133 (302)
T 1w6u_A 102 AGHPNIVINNAAGNFISPTERLSPNAWKTITD 133 (302)
T ss_dssp TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHH
Confidence 557786665544322221 245555555544
No 440
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=40.28 E-value=18 Score=32.37 Aligned_cols=27 Identities=4% Similarity=0.199 Sum_probs=24.0
Q ss_pred CHHHHHHHHHHHHhcCcEEEEeccccc
Q 019899 115 PRETLYELLDFAREKNIHVISDEIYGG 141 (334)
Q Consensus 115 ~~~~l~~i~~~~~~~~~~vi~D~~~~~ 141 (334)
+.++++++++.|+++|+.||+|-++--
T Consensus 73 t~~d~~~lv~~~h~~Gi~VilD~V~NH 99 (471)
T 1jae_A 73 DESAFTDMTRRCNDAGVRIYVDAVINH 99 (471)
T ss_dssp EHHHHHHHHHHHHHTTCEEEEEECCSB
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeccc
Confidence 478899999999999999999988643
No 441
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=40.27 E-value=62 Score=27.94 Aligned_cols=32 Identities=16% Similarity=0.293 Sum_probs=20.0
Q ss_pred EEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccc
Q 019899 101 ILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIY 139 (334)
Q Consensus 101 i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~ 139 (334)
|++.-|- +.+|.+++.++|+++|+.+.+..-|
T Consensus 97 Vl~EKPl-------~~~ea~~l~~~A~~~g~~~~v~~~y 128 (372)
T 4gmf_A 97 VIQEHPL-------HPDDISSLQTLAQEQGCCYWINTFY 128 (372)
T ss_dssp EEEESCC-------CHHHHHHHHHHHHHHTCCEEEECSG
T ss_pred EEEecCC-------CHHHHHHHHHHHHHcCCEEEEcCcc
Confidence 6666552 3556777777777777776666544
No 442
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=40.26 E-value=1.1e+02 Score=23.50 Aligned_cols=117 Identities=13% Similarity=0.114 Sum_probs=61.7
Q ss_pred CcEEEecCc------HHHHHHHHHHhcCCCCeEEecCCCCCC---hhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHH
Q 019899 18 SQIVLTAGA------TPAVEILCFCLADHGNALLVPSPYYPG---FDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAF 88 (334)
Q Consensus 18 ~~i~~~~g~------~~~~~~~~~~l~~~gd~vl~~~p~~~~---~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l 88 (334)
..+.+..|. |+++..+... ...|.+|++..|.-.. ...... ..|.++...++.+ .+++.+.+
T Consensus 8 g~i~v~~G~mgsGKTT~ll~~a~r~-~~~g~kV~v~k~~~d~r~~~~~i~s-~~g~~~~a~~~~~-------~~~i~~~~ 78 (191)
T 1xx6_A 8 GWVEVIVGPMYSGKSEELIRRIRRA-KIAKQKIQVFKPEIDNRYSKEDVVS-HMGEKEQAVAIKN-------SREILKYF 78 (191)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHH-HHTTCCEEEEEEC-------CEEEC-TTSCEEECEEESS-------STHHHHHC
T ss_pred CEEEEEECCCCCcHHHHHHHHHHHH-HHCCCEEEEEEeccCccchHHHHHh-hcCCceeeEeeCC-------HHHHHHHH
Confidence 345555554 5555554444 4567778877655432 112333 4566655555421 12343333
Q ss_pred HHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccccccCCCCcchhhhhhh
Q 019899 89 NQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGGSIFGNEEFVSMAEILE 157 (334)
Q Consensus 89 ~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~~~~~ 157 (334)
.. +..+|++...++ ++.+.+..+.+++.. ++.||+=.--.+ |.+..+.....+.+
T Consensus 79 ~~------~~dvViIDEaqf-----l~~~~v~~l~~l~~~-~~~Vi~~Gl~~d--f~~~~F~~~~~L~~ 133 (191)
T 1xx6_A 79 EE------DTEVIAIDEVQF-----FDDEIVEIVNKIAES-GRRVICAGLDMD--FRGKPFGPIPELMA 133 (191)
T ss_dssp CT------TCSEEEECSGGG-----SCTHHHHHHHHHHHT-TCEEEEEECSBC--TTSCBCTTHHHHHH
T ss_pred hc------cCCEEEEECCCC-----CCHHHHHHHHHHHhC-CCEEEEEecccc--cccCcCccHHHHHH
Confidence 22 467788876554 666667777776664 889987433222 44555555555544
No 443
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=40.22 E-value=22 Score=32.46 Aligned_cols=27 Identities=11% Similarity=0.084 Sum_probs=24.3
Q ss_pred CHHHHHHHHHHHHhcCcEEEEeccccc
Q 019899 115 PRETLYELLDFAREKNIHVISDEIYGG 141 (334)
Q Consensus 115 ~~~~l~~i~~~~~~~~~~vi~D~~~~~ 141 (334)
+.++++++++-|+++||.||.|-++--
T Consensus 91 t~~dfk~Lv~~aH~~GI~VilD~V~NH 117 (527)
T 1gcy_A 91 SDAQLRQAASALGGAGVKVLYDVVPNH 117 (527)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSB
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeecC
Confidence 478999999999999999999998754
No 444
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=40.19 E-value=1.3e+02 Score=23.35 Aligned_cols=99 Identities=12% Similarity=0.013 Sum_probs=47.4
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
..++.+|++.++- .+...|.+.|.+|++..-.-...........+..++..++ -|.+.++++++......++
T Consensus 6 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~-------~~~~~~~~~~~~~~~~~~~ 78 (234)
T 2ehd_A 6 GAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDV-------REEGDWARAVAAMEEAFGE 78 (234)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCT-------TCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecC-------CCHHHHHHHHHHHHHHcCC
Confidence 3455666666663 4444566778777765432111222222011334444443 3566777766654433336
Q ss_pred eeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 98 VRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 98 ~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
+..++.+....+.+. -.+.+++++..+
T Consensus 79 id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 107 (234)
T 2ehd_A 79 LSALVNNAGVGVMKPVHELTLEEWRLVLD 107 (234)
T ss_dssp CCEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 775555443322221 235555555444
No 445
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=39.99 E-value=23 Score=31.87 Aligned_cols=26 Identities=27% Similarity=0.331 Sum_probs=23.9
Q ss_pred CHHHHHHHHHHHHhcCcEEEEecccc
Q 019899 115 PRETLYELLDFAREKNIHVISDEIYG 140 (334)
Q Consensus 115 ~~~~l~~i~~~~~~~~~~vi~D~~~~ 140 (334)
+.++++++++.|+++|+.||+|-++-
T Consensus 80 t~~d~~~Lv~~aH~~Gi~VilD~V~N 105 (488)
T 1wza_A 80 TLEDFHKLVEAAHQRGIKVIIDLPIN 105 (488)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeccc
Confidence 57899999999999999999999864
No 446
>3mw8_A Uroporphyrinogen-III synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 1.65A {Shewanella amazonensis}
Probab=39.84 E-value=21 Score=28.47 Aligned_cols=11 Identities=9% Similarity=0.132 Sum_probs=5.4
Q ss_pred ccCcEEEEEeC
Q 019899 61 RTGVELIPVHC 71 (334)
Q Consensus 61 ~~g~~v~~v~~ 71 (334)
..|.++..+++
T Consensus 141 ~~G~~v~~~~~ 151 (240)
T 3mw8_A 141 LRGANVSYLEV 151 (240)
T ss_dssp HTTCEEEEEEE
T ss_pred HCCCEEEEEEE
Confidence 34555555443
No 447
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=39.76 E-value=51 Score=27.09 Aligned_cols=102 Identities=9% Similarity=0.083 Sum_probs=51.1
Q ss_pred cEEEecCcHHHHHHH-HHHhcCCCC---eEEecCCCCCChhhhhhh----ccCcEEEEEeCCCCCCccccHHHHHHHHHH
Q 019899 19 QIVLTAGATPAVEIL-CFCLADHGN---ALLVPSPYYPGFDRDIRF----RTGVELIPVHCRSTDNFAFSITALDQAFNQ 90 (334)
Q Consensus 19 ~i~~~~g~~~~~~~~-~~~l~~~gd---~vl~~~p~~~~~~~~~~~----~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~ 90 (334)
.+++.+|++.++-.. ...|.+.|. +|++..-.-.......+. ..+.++..+.++- -|.++++++++.
T Consensus 34 k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~ 108 (287)
T 3rku_A 34 KTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDI-----TQAEKIKPFIEN 108 (287)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCT-----TCGGGHHHHHHT
T ss_pred CEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCC-----CCHHHHHHHHHH
Confidence 466666666677444 344555554 666654332222222210 1255666666521 255667777765
Q ss_pred HHHcCCceeEEEEeCCCC-Cccc--CCCHHHHHHHHHH
Q 019899 91 ARKRGVKVRGILICNPAN-PVGN--IIPRETLYELLDF 125 (334)
Q Consensus 91 ~~~~~~~~~~i~~~~p~n-ptG~--~~~~~~l~~i~~~ 125 (334)
.....+++..++.+.... +.+. -.+.++++++.++
T Consensus 109 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~v 146 (287)
T 3rku_A 109 LPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDT 146 (287)
T ss_dssp SCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHH
T ss_pred HHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHH
Confidence 444434677544433322 2222 3366677766653
No 448
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=39.69 E-value=23 Score=31.74 Aligned_cols=27 Identities=30% Similarity=0.500 Sum_probs=24.4
Q ss_pred CHHHHHHHHHHHHhcCcEEEEeccccc
Q 019899 115 PRETLYELLDFAREKNIHVISDEIYGG 141 (334)
Q Consensus 115 ~~~~l~~i~~~~~~~~~~vi~D~~~~~ 141 (334)
+.++++++++-|+++|+.||+|-++.-
T Consensus 95 t~~df~~lv~~~h~~Gi~VilD~V~NH 121 (475)
T 2z1k_A 95 GNEALRHLLEVAHAHGVRVILDGVFNH 121 (475)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSB
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeccc
Confidence 578999999999999999999998753
No 449
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=39.67 E-value=1.5e+02 Score=23.89 Aligned_cols=100 Identities=9% Similarity=0.097 Sum_probs=52.9
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCC-------hhh---hhhhccCcEEEEEeCCCCCCccccHHHHHHH
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPG-------FDR---DIRFRTGVELIPVHCRSTDNFAFSITALDQA 87 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~-------~~~---~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~ 87 (334)
.+++.+|++.++- .+...|.+.|.+|++..-.-.. ... .+. ..|.++..+.++ --|.++++++
T Consensus 7 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D-----v~~~~~v~~~ 80 (274)
T 3e03_A 7 KTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVN-AAGGQGLALKCD-----IREEDQVRAA 80 (274)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHH-HHTSEEEEEECC-----TTCHHHHHHH
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHH-hcCCeEEEEeCC-----CCCHHHHHHH
Confidence 4556666666664 4455566788777766433221 111 112 235667666652 2356777777
Q ss_pred HHHHHHcCCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 88 FNQARKRGVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 88 l~~~~~~~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
++......+++..++.+......+. -.+.++++++.+
T Consensus 81 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~ 119 (274)
T 3e03_A 81 VAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQ 119 (274)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred HHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHh
Confidence 7665544446775544433322222 346566666554
No 450
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=39.48 E-value=84 Score=21.02 Aligned_cols=44 Identities=14% Similarity=0.179 Sum_probs=32.3
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEE
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVIS 135 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~ 135 (334)
-.+...++++. ++.+++++.+- . |.+..+++..+|.+++++++.
T Consensus 19 G~~~v~kai~~-----gka~lViiA~D-~------~~~~~~~i~~~c~~~~ip~~~ 62 (99)
T 3j21_Z 19 GSNETIRLAKT-----GGAKLIIVAKN-A------PKEIKDDIYYYAKLSDIPVYE 62 (99)
T ss_dssp SHHHHHHHHHH-----TCCSEEEEECC-C------CHHHHHHHHHHHHHTTCCEEE
T ss_pred CHHHHHHHHHc-----CCccEEEEeCC-C------CHHHHHHHHHHHHHcCCCEEE
Confidence 35677788876 37787776643 2 356789999999999999753
No 451
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=39.41 E-value=1.4e+02 Score=23.68 Aligned_cols=100 Identities=11% Similarity=0.173 Sum_probs=48.8
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCC-CCCChhh---hhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHH
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSP-YYPGFDR---DIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARK 93 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p-~~~~~~~---~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~ 93 (334)
..++.+|++.++- .+...|.+.|.+|++..- .-..... .++ ..|.++..+..+ --|.+.+++++++...
T Consensus 22 k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~-~~~~~~~~~~~D-----~~~~~~~~~~~~~~~~ 95 (274)
T 1ja9_A 22 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELK-KLGAQGVAIQAD-----ISKPSEVVALFDKAVS 95 (274)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH-HTTCCEEEEECC-----TTSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHH-hcCCcEEEEEec-----CCCHHHHHHHHHHHHH
Confidence 4566666666663 445556677877776533 2111111 112 235555555542 1256677777665444
Q ss_pred cCCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 94 RGVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 94 ~~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
+-+++..++.+....+.+. -.+.+++++..+
T Consensus 96 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 128 (274)
T 1ja9_A 96 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFN 128 (274)
T ss_dssp HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCcccccCCHHHHHHHHH
Confidence 3346775554433322221 235455555444
No 452
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=39.35 E-value=1.5e+02 Score=23.89 Aligned_cols=101 Identities=17% Similarity=0.207 Sum_probs=51.0
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhh--ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcC
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRF--RTGVELIPVHCRSTDNFAFSITALDQAFNQARKRG 95 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~--~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~ 95 (334)
.+++.+|++.++- .+...|.+.|.+|++..-.-.......+. ..|.++..+.++ --|.++++++++......
T Consensus 23 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~~ 97 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCD-----VRSVPEIEALVAAVVERY 97 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECC-----TTCHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECC-----CCCHHHHHHHHHHHHHHh
Confidence 4556666666664 44455667787777654321111111110 125455555542 135677777777655544
Q ss_pred CceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 96 VKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 96 ~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
+++..++.+....+.+. -.+.+++++..+
T Consensus 98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 128 (277)
T 2rhc_B 98 GPVDVLVNNAGRPGGGATAELADELWLDVVE 128 (277)
T ss_dssp CSCSEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 56785554433332222 245555655554
No 453
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=39.23 E-value=68 Score=30.59 Aligned_cols=76 Identities=16% Similarity=0.140 Sum_probs=46.7
Q ss_pred cEEEEEeCCCCCCccccHHHHHHHH-HHHHHcCCceeEEEEeCC-CCCcc---------------cCCCHHHHHHHHHHH
Q 019899 64 VELIPVHCRSTDNFAFSITALDQAF-NQARKRGVKVRGILICNP-ANPVG---------------NIIPRETLYELLDFA 126 (334)
Q Consensus 64 ~~v~~v~~~~~~~~~~~~~~l~~~l-~~~~~~~~~~~~i~~~~p-~nptG---------------~~~~~~~l~~i~~~~ 126 (334)
..++.+.+..- ...-+...+.+.+ ...+.. +..+|.++-. .+|.+ ..-+.++++++++.|
T Consensus 246 ~~IYE~h~~s~-~~~G~~~~l~~~l~~yLk~l--G~t~I~L~Pi~e~~~~~~wGY~~~~y~a~~~~yGt~~dfk~lV~~~ 322 (722)
T 3k1d_A 246 MSTYEVHLGSW-RPGLSYRQLARELTDYIVDQ--GFTHVELLPVAEHPFAGSWGYQVTSYYAPTSRFGTPDDFRALVDAL 322 (722)
T ss_dssp CEEEEECTTTS-STTCCHHHHHHHHHHHHHHH--TCSEEEESCCEECSCGGGTTCSCSEEEEECGGGCCHHHHHHHHHHH
T ss_pred eEEEEEehhhc-cCCCCHHHHHHHHHHHHHHc--CCCeEEECCcccCCCCCCCCCCcccCcCccccCCCHHHHHHHHHHH
Confidence 45666665321 1124566666554 333222 5666766643 22321 123678999999999
Q ss_pred HhcCcEEEEecccccc
Q 019899 127 REKNIHVISDEIYGGS 142 (334)
Q Consensus 127 ~~~~~~vi~D~~~~~~ 142 (334)
+++||.||.|-++.-+
T Consensus 323 H~~GI~VilD~V~NH~ 338 (722)
T 3k1d_A 323 HQAGIGVIVDWVPAHF 338 (722)
T ss_dssp HHTTCEEEEEECTTCC
T ss_pred HHcCCEEEEEEEeecc
Confidence 9999999999987643
No 454
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=39.22 E-value=79 Score=26.94 Aligned_cols=59 Identities=14% Similarity=0.085 Sum_probs=40.4
Q ss_pred CCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEe
Q 019899 75 DNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISD 136 (334)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D 136 (334)
.+..+|.+.+++.++..... ++..++++ .++--+..++.+|..++++.+...+++||+=
T Consensus 40 ~dg~ID~~~l~~lv~~li~~--Gv~Gl~v~-GtTGE~~~Ls~eEr~~vi~~~~~grvpViaG 98 (344)
T 2hmc_A 40 QDRTPDFDALVRKGKELIAD--GMSAVVYC-GSMGDWPLLTDEQRMEGVERLVKAGIPVIVG 98 (344)
T ss_dssp TTSSBCHHHHHHHHHHHHHT--TCCCEEES-SGGGTGGGSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHc--CCCEEEeC-ccCcChhhCCHHHHHHHHHHHhCCCCcEEEe
Confidence 45689999999988876554 34445444 3333456788999999888855556777743
No 455
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=38.98 E-value=23 Score=31.86 Aligned_cols=27 Identities=15% Similarity=0.208 Sum_probs=24.4
Q ss_pred CHHHHHHHHHHHHhcCcEEEEeccccc
Q 019899 115 PRETLYELLDFAREKNIHVISDEIYGG 141 (334)
Q Consensus 115 ~~~~l~~i~~~~~~~~~~vi~D~~~~~ 141 (334)
+.++++++++.|+++|+.||.|-++.-
T Consensus 96 t~~df~~lv~~~H~~Gi~VilD~V~NH 122 (484)
T 2aaa_A 96 TADNLKSLSDALHARGMYLMVDVVPDH 122 (484)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECCSB
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCC
Confidence 578999999999999999999998754
No 456
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=38.91 E-value=1.5e+02 Score=23.86 Aligned_cols=100 Identities=8% Similarity=0.066 Sum_probs=50.3
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhh--ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcC
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRF--RTGVELIPVHCRSTDNFAFSITALDQAFNQARKRG 95 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~--~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~ 95 (334)
.+++.+|++.++- .+...|.+.|.+|++..-.-.......+. ..| ++..+.++ --|.++++++++......
T Consensus 30 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~D-----v~d~~~v~~~~~~~~~~~ 103 (276)
T 2b4q_A 30 RIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPAD-----LSSEAGARRLAQALGELS 103 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCC-----TTSHHHHHHHHHHHHHHC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEee-----CCCHHHHHHHHHHHHHhc
Confidence 4556666666664 44455667787777764322212111110 123 44444432 235677777777655544
Q ss_pred CceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 96 VKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 96 ~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
+++..++.+......+. -.+.+++++..+
T Consensus 104 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 134 (276)
T 2b4q_A 104 ARLDILVNNAGTSWGAALESYPVSGWEKVMQ 134 (276)
T ss_dssp SCCSEEEECCCCCCCCCTTSCCSHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 57785554433322222 235555665554
No 457
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=38.87 E-value=1.1e+02 Score=28.05 Aligned_cols=79 Identities=14% Similarity=0.087 Sum_probs=51.2
Q ss_pred CCCCeEEecCCCCCChhhh-------hhhccCcEEEEEeC-CCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCc
Q 019899 39 DHGNALLVPSPYYPGFDRD-------IRFRTGVELIPVHC-RSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPV 110 (334)
Q Consensus 39 ~~gd~vl~~~p~~~~~~~~-------~~~~~g~~v~~v~~-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~npt 110 (334)
++||.|++....-++.... +. ..|++|++-.. ...-..+-+-++|...++.. +++.++.++..
T Consensus 322 ~~~d~vi~s~~~ipGne~~~~~~~~~l~-~~g~~v~~~~~~~~h~SgHa~~~eL~~~~~~~-----~Pk~~ipvHGe--- 392 (555)
T 3zq4_A 322 NPGDTVVFSSSPIPGNTISVSRTINQLY-RAGAEVIHGPLNDIHTSGHGGQEEQKLMLRLI-----KPKFFMPIHGE--- 392 (555)
T ss_dssp CTTCEEEECSCCCTTCHHHHHHHHHHHH-HTTCEEECSSSSCCCCCSSCCHHHHHHHHHHS-----CEEEEEEESBC---
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHH-HCCCEEEecCCcceEEeCCCCHHHHHHHHHHh-----CCCEEEEcCCC---
Confidence 4789999998776665422 22 46888875110 00122367899999999875 78877777654
Q ss_pred ccCCCHHHHHHHHHHHHhcCc
Q 019899 111 GNIIPRETLYELLDFAREKNI 131 (334)
Q Consensus 111 G~~~~~~~l~~i~~~~~~~~~ 131 (334)
...+.+..+++++.|+
T Consensus 393 -----~~~~~~~~~~a~~~G~ 408 (555)
T 3zq4_A 393 -----YRMQKMHVKLATDCGI 408 (555)
T ss_dssp -----HHHHHHHHHHHHHTTC
T ss_pred -----HHHHHHHHHHHHHcCC
Confidence 2336777777777664
No 458
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=38.81 E-value=1.5e+02 Score=23.68 Aligned_cols=102 Identities=14% Similarity=0.158 Sum_probs=54.0
Q ss_pred CcEEEecCcHHHH-HHHHHHhcCCCCeEEecCCCCCChhhhhhh--ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 18 SQIVLTAGATPAV-EILCFCLADHGNALLVPSPYYPGFDRDIRF--RTGVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 18 ~~i~~~~g~~~~~-~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~--~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
+.+++.+|++.++ ..+...|.+.|.+|++..-.-......... ..|.++..+.++ --|.++++++++....+
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~ 85 (264)
T 3ucx_A 11 DKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTD-----ITDDAQVAHLVDETMKA 85 (264)
T ss_dssp TCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECC-----TTCHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcC-----CCCHHHHHHHHHHHHHH
Confidence 3455566665566 444555667888877765432222222110 235556666542 23567777777766555
Q ss_pred CCceeEEEEeCCCC-Cccc--CCCHHHHHHHHH
Q 019899 95 GVKVRGILICNPAN-PVGN--IIPRETLYELLD 124 (334)
Q Consensus 95 ~~~~~~i~~~~p~n-ptG~--~~~~~~l~~i~~ 124 (334)
.+++..++.+.... +.+. -.+.+++++..+
T Consensus 86 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 118 (264)
T 3ucx_A 86 YGRVDVVINNAFRVPSMKPFANTTFEHMRDAIE 118 (264)
T ss_dssp TSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCcEEEECCCCCCCCCCchhCCHHHHHHHHH
Confidence 55778555443221 2222 345566666655
No 459
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=38.55 E-value=1.6e+02 Score=23.96 Aligned_cols=101 Identities=4% Similarity=-0.025 Sum_probs=59.3
Q ss_pred EecCcHHHHHHHHHHhcCCCCeEEecCC---CCCC----hhhh--------hhhcc-CcEEEEEeCCCCCCccccHHHHH
Q 019899 22 LTAGATPAVEILCFCLADHGNALLVPSP---YYPG----FDRD--------IRFRT-GVELIPVHCRSTDNFAFSITALD 85 (334)
Q Consensus 22 ~~~g~~~~~~~~~~~l~~~gd~vl~~~p---~~~~----~~~~--------~~~~~-g~~v~~v~~~~~~~~~~~~~~l~ 85 (334)
+++...+.+...+.....+.-+|++..+ .|.- .... ++ .. |.+++.+.. ....+++.
T Consensus 101 ~s~~~~~~~~~~l~~~~~~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~-~~~G~eVi~LG~------~vp~e~iv 173 (262)
T 1xrs_B 101 SEILSMEETDEYIKENIGRKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLE-RYEMIDAYNLGS------QVANEDFI 173 (262)
T ss_dssp -CCCCHHHHHHHHHHHTCSCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGG-GCTTEEEEECCS------SBCHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHH-hcCCcEEEECCC------CCCHHHHH
Confidence 4455555555455544444446666543 2321 1111 44 56 888887764 46789998
Q ss_pred HHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcC----cEEEEe
Q 019899 86 QAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKN----IHVISD 136 (334)
Q Consensus 86 ~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~----~~vi~D 136 (334)
++..+. ++.+|.++....+. -.+.+.++++++.+++.+ +.|++=
T Consensus 174 ~aa~e~-----~~d~VglS~l~t~~--~~~~~~~~~~i~~L~~~g~~~~i~vivG 221 (262)
T 1xrs_B 174 KKAVEL-----EADVLLVSQTVTQK--NVHIQNMTHLIELLEAEGLRDRFVLLCG 221 (262)
T ss_dssp HHHHHT-----TCSEEEEECCCCTT--SHHHHHHHHHHHHHHHTTCGGGSEEEEE
T ss_pred HHHHHc-----CCCEEEEEeecCCc--cchHHHHHHHHHHHHhcCCCCCCEEEEE
Confidence 888774 88877777554430 113456888888887765 566644
No 460
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=38.28 E-value=80 Score=26.37 Aligned_cols=59 Identities=14% Similarity=0.181 Sum_probs=41.6
Q ss_pred CCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc---CcEEEE
Q 019899 74 TDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK---NIHVIS 135 (334)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~vi~ 135 (334)
+.+..+|.+.+++.++....+ ++..++++ .++--+..++.+|.+++++.+.+. +++||+
T Consensus 27 ~~dg~iD~~~l~~lv~~li~~--Gv~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 88 (307)
T 3s5o_A 27 TATAEVDYGKLEENLHKLGTF--PFRGFVVQ-GSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLA 88 (307)
T ss_dssp CTTSCBCHHHHHHHHHHHTTS--CCSEEEES-SGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEE
T ss_pred CCCCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccchhhCCHHHHHHHHHHHHHHcCCCCcEEE
Confidence 345589999999998876544 35555544 333335678999999999988774 577775
No 461
>3u5e_c L32, RP73, YL38, 60S ribosomal protein L30; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_f 3izs_f 3o58_Z 3o5h_Z 1t0k_B 3u5i_c 4b6a_c 1ck2_A 1cn7_A 1nmu_B* 3jyw_2
Probab=38.15 E-value=76 Score=21.58 Aligned_cols=42 Identities=21% Similarity=0.153 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEE
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVI 134 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi 134 (334)
.++..++|+. ++.+++++.+-. +....+++..+|..++++++
T Consensus 27 ~~~v~kai~~-----gkaklVilA~D~-------~~~~~~~i~~~c~~~~ip~~ 68 (105)
T 3u5e_c 27 YKSTVKSLRQ-----GKSKLIIIAANT-------PVLRKSELEYYAMLSKTKVY 68 (105)
T ss_dssp HHHHHHHHHT-----TCCSEEEECTTS-------CHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHc-----CCceEEEEeCCC-------CHHHHHHHHHHHHHcCCCEE
Confidence 4667777776 367777666432 45568899999999999998
No 462
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=38.11 E-value=1.5e+02 Score=23.46 Aligned_cols=76 Identities=16% Similarity=0.006 Sum_probs=44.1
Q ss_pred cEEEecCcH-HHHHHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 19 QIVLTAGAT-PAVEILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 19 ~i~~~~g~~-~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
+|.+..+.. +++..+-..+-+.|..|++.... ....++...+..|+.+++ +.-++.++|+..+..+.
T Consensus 40 ~I~vi~~~le~av~~a~~~~~~~~~dVIISRGg---ta~~Lr~~~~iPVV~I~v--------s~~Dil~aL~~a~~~~~- 107 (225)
T 2pju_A 40 NITPIQLGFEKAVTYIRKKLANERCDAIIAAGS---NGAYLKSRLSVPVILIKP--------SGYDVLQFLAKAGKLTS- 107 (225)
T ss_dssp EEEEECCCHHHHHHHHHHHTTTSCCSEEEEEHH---HHHHHHTTCSSCEEEECC--------CHHHHHHHHHHTTCTTS-
T ss_pred eEEEecCcHHHHHHHHHHHHhcCCCeEEEeCCh---HHHHHHhhCCCCEEEecC--------CHHHHHHHHHHHHhhCC-
Confidence 466655554 46666555443344557766543 334444356788888885 55678888877654433
Q ss_pred eeEEEEeCCC
Q 019899 98 VRGILICNPA 107 (334)
Q Consensus 98 ~~~i~~~~p~ 107 (334)
+..++..++
T Consensus 108 -kIavVg~~~ 116 (225)
T 2pju_A 108 -SIGVVTYQE 116 (225)
T ss_dssp -CEEEEEESS
T ss_pred -cEEEEeCch
Confidence 444555444
No 463
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=37.93 E-value=1.5e+02 Score=23.52 Aligned_cols=101 Identities=10% Similarity=0.113 Sum_probs=49.0
Q ss_pred cEEEecCcHHHH-HHHHHHhcCCCCeEEecCCCCCChhhhhhh--cc-CcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 19 QIVLTAGATPAV-EILCFCLADHGNALLVPSPYYPGFDRDIRF--RT-GVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 19 ~i~~~~g~~~~~-~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~--~~-g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
.+++.+|++.++ ..+...|.+.|.+|++..-.-.......+. .. +.++..+..+ --|.++++++++.....
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D-----~~~~~~~~~~~~~~~~~ 82 (263)
T 3ai3_A 8 KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVD-----VATPEGVDAVVESVRSS 82 (263)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECC-----TTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcC-----CCCHHHHHHHHHHHHHH
Confidence 455555665566 344555667787777654321111111110 11 4455555542 12567777776655443
Q ss_pred CCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 95 GVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 95 ~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
.+++..++.+....+.+. -.+.+++++..+
T Consensus 83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (263)
T 3ai3_A 83 FGGADILVNNAGTGSNETIMEAADEKWQFYWE 114 (263)
T ss_dssp HSSCSEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 346775554433322222 235555555554
No 464
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=37.82 E-value=1.5e+02 Score=23.50 Aligned_cols=100 Identities=16% Similarity=0.182 Sum_probs=49.5
Q ss_pred CcEEEecCcH--HHH-HHHHHHhcCCCCeEEecCCCCCChhhhhh---hccCcEEEEEeCCCCCCccccHHHHHHHHHHH
Q 019899 18 SQIVLTAGAT--PAV-EILCFCLADHGNALLVPSPYYPGFDRDIR---FRTGVELIPVHCRSTDNFAFSITALDQAFNQA 91 (334)
Q Consensus 18 ~~i~~~~g~~--~~~-~~~~~~l~~~gd~vl~~~p~~~~~~~~~~---~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~ 91 (334)
+..++.+|++ .++ ..+...|.+.|.+|++..-. ......++ ...+ ++..+.++ --|.++++++++..
T Consensus 14 ~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~-~~~~~~~D-----v~~~~~v~~~~~~~ 86 (271)
T 3ek2_A 14 GKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVG-DRFKDRITEFAAEFG-SELVFPCD-----VADDAQIDALFASL 86 (271)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESS-GGGHHHHHHHHHHTT-CCCEEECC-----TTCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecc-hhhHHHHHHHHHHcC-CcEEEECC-----CCCHHHHHHHHHHH
Confidence 3444555544 555 34445566778777766433 11111111 0222 23333331 23567777777776
Q ss_pred HHcCCceeEEEEeCCCCCc----cc---CCCHHHHHHHHH
Q 019899 92 RKRGVKVRGILICNPANPV----GN---IIPRETLYELLD 124 (334)
Q Consensus 92 ~~~~~~~~~i~~~~p~npt----G~---~~~~~~l~~i~~ 124 (334)
..+.+++..++.+....+. +. -.+.+++++..+
T Consensus 87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (271)
T 3ek2_A 87 KTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHD 126 (271)
T ss_dssp HHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHH
T ss_pred HHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHh
Confidence 6655678855544443322 22 145566666555
No 465
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=37.76 E-value=87 Score=26.67 Aligned_cols=58 Identities=12% Similarity=0.110 Sum_probs=40.3
Q ss_pred CCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc---CcEEEE
Q 019899 75 DNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK---NIHVIS 135 (334)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~vi~ 135 (334)
++..+|.+.+++.++..... ++..++++ .++--+..++.+|..++++.+.+. +++||+
T Consensus 45 ~dg~ID~~~l~~lv~~li~~--Gv~Gl~v~-GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 105 (343)
T 2v9d_A 45 ADGQLDKPGTAALIDDLIKA--GVDGLFFL-GSGGEFSQLGAEERKAIARFAIDHVDRRVPVLI 105 (343)
T ss_dssp TTSSBCHHHHHHHHHHHHHT--TCSCEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCcCHHHHHHHHHHHHHc--CCCEEEeC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 45689999999988876554 34545444 444446678999999998887653 567764
No 466
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=37.68 E-value=1.2e+02 Score=24.39 Aligned_cols=83 Identities=6% Similarity=-0.015 Sum_probs=41.0
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCC-CCCChhhhhhh---ccCcEEEEEeCCCCCCccccH----HHHHHHHH
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSP-YYPGFDRDIRF---RTGVELIPVHCRSTDNFAFSI----TALDQAFN 89 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p-~~~~~~~~~~~---~~g~~v~~v~~~~~~~~~~~~----~~l~~~l~ 89 (334)
.+++.+|++.++- .+...|.+.|.+|++..- .-......... ..|.++..+..+-. |. +.++++++
T Consensus 12 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~ 86 (276)
T 1mxh_A 12 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS-----LSSSLLDCCEDIID 86 (276)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCS-----SSTTHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCC-----CccccHHHHHHHHH
Confidence 4566667777774 444556677877776543 21111111110 11445555554211 33 56666665
Q ss_pred HHHHcCCceeEEEEeCC
Q 019899 90 QARKRGVKVRGILICNP 106 (334)
Q Consensus 90 ~~~~~~~~~~~i~~~~p 106 (334)
......+++.+++.+..
T Consensus 87 ~~~~~~g~id~lv~nAg 103 (276)
T 1mxh_A 87 CSFRAFGRCDVLVNNAS 103 (276)
T ss_dssp HHHHHHSCCCEEEECCC
T ss_pred HHHHhcCCCCEEEECCC
Confidence 54433346775554443
No 467
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=37.46 E-value=1.6e+02 Score=23.58 Aligned_cols=100 Identities=11% Similarity=0.069 Sum_probs=47.8
Q ss_pred cEEEecCc--HHHH-HHHHHHhcCCCCeEEecCCCCCC-hhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHc
Q 019899 19 QIVLTAGA--TPAV-EILCFCLADHGNALLVPSPYYPG-FDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKR 94 (334)
Q Consensus 19 ~i~~~~g~--~~~~-~~~~~~l~~~gd~vl~~~p~~~~-~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~ 94 (334)
.+++.+|+ +.++ ..+...|.+.|.+|++..-.-.. .....+ ..+.++..+.++ --|.++++++++.....
T Consensus 8 k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~ 81 (269)
T 2h7i_A 8 KRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD-RLPAKAPLLELD-----VQNEEHLASLAGRVTEA 81 (269)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHT-TSSSCCCEEECC-----TTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHH-hcCCCceEEEcc-----CCCHHHHHHHHHHHHHH
Confidence 34555554 5566 34445566778777765432211 122222 334344444431 12566777776655443
Q ss_pred CC---ceeEEEEeCCCCC-----cc--cCCCHHHHHHHHH
Q 019899 95 GV---KVRGILICNPANP-----VG--NIIPRETLYELLD 124 (334)
Q Consensus 95 ~~---~~~~i~~~~p~np-----tG--~~~~~~~l~~i~~ 124 (334)
.+ ++..++.+....+ .+ .-.+.+++++..+
T Consensus 82 ~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (269)
T 2h7i_A 82 IGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIH 121 (269)
T ss_dssp HCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHH
T ss_pred hCCCCCceEEEECCccCccccccccccccCCHHHHHHHHH
Confidence 23 6775544433222 11 1245556665554
No 468
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=37.33 E-value=23 Score=33.73 Aligned_cols=25 Identities=16% Similarity=0.331 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHhcCcEEEEecccc
Q 019899 116 RETLYELLDFAREKNIHVISDEIYG 140 (334)
Q Consensus 116 ~~~l~~i~~~~~~~~~~vi~D~~~~ 140 (334)
.++++++++.|++.||.||.|-+|.
T Consensus 254 ~~efk~lV~~~H~~Gi~VilDvV~N 278 (714)
T 2ya0_A 254 IAEFKNLINEIHKRGMGAILDVVYN 278 (714)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccC
Confidence 5899999999999999999999875
No 469
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=37.27 E-value=21 Score=31.38 Aligned_cols=27 Identities=26% Similarity=0.324 Sum_probs=24.4
Q ss_pred CHHHHHHHHHHHHhcCcEEEEeccccc
Q 019899 115 PRETLYELLDFAREKNIHVISDEIYGG 141 (334)
Q Consensus 115 ~~~~l~~i~~~~~~~~~~vi~D~~~~~ 141 (334)
+.++++++++.|+++|+.||+|-++.-
T Consensus 73 ~~~d~~~lv~~~h~~Gi~VilD~V~NH 99 (422)
T 1ua7_A 73 TEQEFKEMCAAAEEYGIKVIVDAVINH 99 (422)
T ss_dssp EHHHHHHHHHHHHTTTCEEEEEECCSB
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeccCc
Confidence 578899999999999999999998754
No 470
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=37.24 E-value=93 Score=20.87 Aligned_cols=43 Identities=14% Similarity=0.044 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEE
Q 019899 81 ITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVIS 135 (334)
Q Consensus 81 ~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~ 135 (334)
.+...++++. ++.+++++.+- . |.+....+..+|++++++++.
T Consensus 21 ~~~v~kai~~-----gka~lViiA~D-~------~~~~~~~l~~~c~~~~vp~~~ 63 (101)
T 1w41_A 21 ARKSIQYAKM-----GGAKLIIVARN-A------RPDIKEDIEYYARLSGIPVYE 63 (101)
T ss_dssp HHHHHHHHHH-----TCCSEEEEETT-S------CHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHc-----CCCcEEEEeCC-C------CHHHHHHHHHHHHhcCCCEEE
Confidence 4667778876 36777776643 2 356789999999999999663
No 471
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=37.12 E-value=28 Score=30.72 Aligned_cols=27 Identities=33% Similarity=0.336 Sum_probs=24.3
Q ss_pred CHHHHHHHHHHHHhcCcEEEEeccccc
Q 019899 115 PRETLYELLDFAREKNIHVISDEIYGG 141 (334)
Q Consensus 115 ~~~~l~~i~~~~~~~~~~vi~D~~~~~ 141 (334)
+.++++++++-|+++|+.||.|-++.-
T Consensus 80 t~~d~~~lv~~ah~~Gi~vilD~V~NH 106 (424)
T 2dh2_A 80 SKEDFDSLLQSAKKKSIRVILDLTPNY 106 (424)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCTTT
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCc
Confidence 578999999999999999999998753
No 472
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=36.75 E-value=1.4e+02 Score=24.66 Aligned_cols=52 Identities=10% Similarity=0.111 Sum_probs=37.7
Q ss_pred CCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc
Q 019899 75 DNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK 129 (334)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~ 129 (334)
++..+|.+.+++.++..... ++..++++ .++--+..++.+|..++++.+.+.
T Consensus 13 ~dg~iD~~~l~~lv~~li~~--Gv~gl~~~-GttGE~~~Ls~eEr~~v~~~~~~~ 64 (293)
T 1w3i_A 13 KDNRIDKEKLKIHAENLIRK--GIDKLFVN-GTTGLGPSLSPEEKLENLKAVYDV 64 (293)
T ss_dssp TTSSBCHHHHHHHHHHHHHT--TCCEEEES-STTTTGGGSCHHHHHHHHHHHHTT
T ss_pred CCCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHH
Confidence 45689999999988866554 45555544 444456778999999999988764
No 473
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=36.72 E-value=92 Score=25.52 Aligned_cols=49 Identities=20% Similarity=0.141 Sum_probs=34.8
Q ss_pred ccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEec
Q 019899 77 FAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDE 137 (334)
Q Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~ 137 (334)
|-+|...+.++... +..+|++... .++.++++++.+.|++.|+-+++|-
T Consensus 128 fi~d~~qi~ea~~~------GAD~VlLi~a------~L~~~~l~~l~~~a~~lGl~~lvev 176 (272)
T 3tsm_A 128 FLFDPYQVYEARSW------GADCILIIMA------SVDDDLAKELEDTAFALGMDALIEV 176 (272)
T ss_dssp CCCSTHHHHHHHHT------TCSEEEEETT------TSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCHHHHHHHHHc------CCCEEEEccc------ccCHHHHHHHHHHHHHcCCeEEEEe
Confidence 44566666665443 5666666644 3567889999999999999999874
No 474
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=36.71 E-value=68 Score=27.71 Aligned_cols=79 Identities=13% Similarity=0.153 Sum_probs=47.5
Q ss_pred cCCCCeEEecCCCCCCh-------hh---hhhhccCcEEEEEeCCCC-CCc-----cccHHHHHHHHHHHHHcCCceeEE
Q 019899 38 ADHGNALLVPSPYYPGF-------DR---DIRFRTGVELIPVHCRST-DNF-----AFSITALDQAFNQARKRGVKVRGI 101 (334)
Q Consensus 38 ~~~gd~vl~~~p~~~~~-------~~---~~~~~~g~~v~~v~~~~~-~~~-----~~~~~~l~~~l~~~~~~~~~~~~i 101 (334)
+++||+|-+..|+.+.. .. .++ ..|.+|+.-+.-.. +++ .--.++|.+++++ +.+++|
T Consensus 40 Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~-~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~D-----p~i~aI 113 (371)
T 3tla_A 40 LAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQ-RKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYN-----PDITCI 113 (371)
T ss_dssp CCTTCEEEEECSSCCHHHHTHHHHHHHHHHHH-HTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTC-----TTEEEE
T ss_pred CCCcCEEEEEeCCCCccccCHHHHHHHHHHHH-hCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhC-----CCCCEE
Confidence 46899999999987642 12 233 47999887764221 111 1234445555554 478989
Q ss_pred EEeCCCCCcccCCCHHHHHHH
Q 019899 102 LICNPANPVGNIIPRETLYEL 122 (334)
Q Consensus 102 ~~~~p~nptG~~~~~~~l~~i 122 (334)
+++....-+-.+++.=+.+.|
T Consensus 114 ~~~rGGyga~rlLp~LD~~~i 134 (371)
T 3tla_A 114 MSTIGGDNSNSLLPFLDYDAI 134 (371)
T ss_dssp EESCCCSCGGGGGGGSCHHHH
T ss_pred EEccccccHHHHHhhcChhhH
Confidence 888876656666554334433
No 475
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=36.53 E-value=1.2e+02 Score=25.08 Aligned_cols=57 Identities=19% Similarity=0.296 Sum_probs=38.4
Q ss_pred CCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc---CcEEEE
Q 019899 75 DNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK---NIHVIS 135 (334)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~vi~ 135 (334)
++. +|.+.+++.++....+ ++..++++ .++--+..++.+|.+++++.+.+. +++||+
T Consensus 16 ~dg-iD~~~l~~lv~~li~~--Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~ 75 (291)
T 3a5f_A 16 NTG-VDFDKLSELIEWHIKS--KTDAIIVC-GTTGEATTMTETERKETIKFVIDKVNKRIPVIA 75 (291)
T ss_dssp SSS-BCHHHHHHHHHHHHHT--TCCEEEES-SGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCC-cCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 345 9999999988866554 45555544 333345678888998888877653 467664
No 476
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=36.43 E-value=1.2e+02 Score=24.57 Aligned_cols=59 Identities=12% Similarity=0.048 Sum_probs=41.1
Q ss_pred ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcC--cEEEE
Q 019899 61 RTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKN--IHVIS 135 (334)
Q Consensus 61 ~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~--~~vi~ 135 (334)
..|.+++.+.. ....+++.+++++. ++.+|.++....++ ...++++++.+++.+ +.|++
T Consensus 149 ~~G~~Vi~LG~------~vp~e~l~~~~~~~-----~~d~V~lS~l~~~~-----~~~~~~~i~~l~~~~~~~~v~v 209 (258)
T 2i2x_B 149 ANGYNVVDLGR------DVPAEEVLAAVQKE-----KPIMLTGTALMTTT-----MYAFKEVNDMLLENGIKIPFAC 209 (258)
T ss_dssp HTTCEEEEEEE------ECCSHHHHHHHHHH-----CCSEEEEECCCTTT-----TTHHHHHHHHHHTTTCCCCEEE
T ss_pred HCCCEEEECCC------CCCHHHHHHHHHHc-----CCCEEEEEeeccCC-----HHHHHHHHHHHHhcCCCCcEEE
Confidence 57999988874 35778888888775 88877777654432 335888888787654 45553
No 477
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=36.42 E-value=1.3e+02 Score=23.87 Aligned_cols=100 Identities=17% Similarity=0.132 Sum_probs=51.3
Q ss_pred cEEEecCcHHHHHHHH-HHhcCC--CCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcC
Q 019899 19 QIVLTAGATPAVEILC-FCLADH--GNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRG 95 (334)
Q Consensus 19 ~i~~~~g~~~~~~~~~-~~l~~~--gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~ 95 (334)
.+++.+|++.++-..+ ..|.+. |..|+.....-.......+ ..+.++..+.++ --|.+.++++++......
T Consensus 3 k~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~-~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~~ 76 (254)
T 3kzv_A 3 KVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKE-KYGDRFFYVVGD-----ITEDSVLKQLVNAAVKGH 76 (254)
T ss_dssp CEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHH-HHGGGEEEEESC-----TTSHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHH-HhCCceEEEECC-----CCCHHHHHHHHHHHHHhc
Confidence 4567777777774443 344443 4566554333222222233 345556555542 235677777776654444
Q ss_pred CceeEEEEeCCC-CCccc--CCCHHHHHHHHH
Q 019899 96 VKVRGILICNPA-NPVGN--IIPRETLYELLD 124 (334)
Q Consensus 96 ~~~~~i~~~~p~-nptG~--~~~~~~l~~i~~ 124 (334)
+++..++.+... .+.+. -.+.+++++..+
T Consensus 77 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 108 (254)
T 3kzv_A 77 GKIDSLVANAGVLEPVQNVNEIDVNAWKKLYD 108 (254)
T ss_dssp SCCCEEEEECCCCCCCTTTTSCCHHHHHHHHH
T ss_pred CCccEEEECCcccCCCCCcccCCHHHHHHHHH
Confidence 577855544433 23232 346666666655
No 478
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=36.37 E-value=91 Score=22.10 Aligned_cols=45 Identities=4% Similarity=0.097 Sum_probs=32.7
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEE
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVIS 135 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~ 135 (334)
-..+..++|+. ++.+++++.+-..| .+....+..+|.+++++++.
T Consensus 28 G~~~v~Kai~~-----gka~LViiA~D~~p------~~~~~~i~~lc~~~~Ip~~~ 72 (126)
T 2xzm_U 28 GLHEVLRTIEA-----KQALFVCVAEDCDQ------GNYVKLVKALCAKNEIKYVS 72 (126)
T ss_dssp SHHHHHHHHHH-----TCCSEEEEESSCCS------TTHHHHHHHHHHHTTCCEEE
T ss_pred cHHHHHHHHHc-----CCceEEEEeCCCCh------HHHHHHHHHHHHHhCCCEEE
Confidence 35667777776 37888888765444 23368888999999999883
No 479
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=36.24 E-value=1.3e+02 Score=25.51 Aligned_cols=59 Identities=7% Similarity=0.081 Sum_probs=36.9
Q ss_pred cccHHHHHHHHHHHHHcCC-ceeEEEEeCCCCCcc--------cCCCHHHHHHHHHHHHhcCcEEEEe
Q 019899 78 AFSITALDQAFNQARKRGV-KVRGILICNPANPVG--------NIIPRETLYELLDFAREKNIHVISD 136 (334)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~~-~~~~i~~~~p~nptG--------~~~~~~~l~~i~~~~~~~~~~vi~D 136 (334)
..+.+.....++..+..|- -+++.+...|.++.+ .+.+.+++.++++.|++.|+.|++|
T Consensus 49 ~~~~~~~~~~l~~lk~~g~N~VrL~v~~~~~~~~~~~~~~~~~~t~~~~~v~~~~~~Ak~~GL~V~l~ 116 (343)
T 3civ_A 49 TWGTDEARASMRALAEQPFNWVTLAFAGLMEHPGDPAIAYGPPVTVSDDEIASMAELAHALGLKVCLK 116 (343)
T ss_dssp GGGSHHHHHHHHHHHHSSCSEEEEEEEEEESSTTCCCCBCSTTTBCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CcCchhHHHHHHHHHHcCCCEEEEEeeecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 3444444555555544333 345555545543222 2237889999999999999999885
No 480
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=36.21 E-value=95 Score=26.19 Aligned_cols=78 Identities=14% Similarity=0.191 Sum_probs=46.6
Q ss_pred cCCCCeEEecCCCCCC-------hhh---hhhhccCcEEEEEeCCC-CCCc-----cccHHHHHHHHHHHHHcCCceeEE
Q 019899 38 ADHGNALLVPSPYYPG-------FDR---DIRFRTGVELIPVHCRS-TDNF-----AFSITALDQAFNQARKRGVKVRGI 101 (334)
Q Consensus 38 ~~~gd~vl~~~p~~~~-------~~~---~~~~~~g~~v~~v~~~~-~~~~-----~~~~~~l~~~l~~~~~~~~~~~~i 101 (334)
+++||+|-+..|+.+. +.. .++ ..|.+|+.-+.-. .+++ .--.++|.+++++ ..+++|
T Consensus 9 L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~-~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~D-----p~i~aI 82 (327)
T 4h1h_A 9 LKQGDEIRIIAPSRSIGIMADNQVEIAVNRLT-DMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFND-----SSVKAI 82 (327)
T ss_dssp CCTTCEEEEECSSSCGGGSCHHHHHHHHHHHH-HTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHC-----TTEEEE
T ss_pred CCCCCEEEEEeCCCCcCccCHHHHHHHHHHHH-hCCCEEEECcchhhccCcccCCHHHHHHHHHHHhhC-----CCCCEE
Confidence 5789999999888652 111 233 4788887766321 1111 1244556666665 489999
Q ss_pred EEeCCCCCcccCCCHHHHHH
Q 019899 102 LICNPANPVGNIIPRETLYE 121 (334)
Q Consensus 102 ~~~~p~nptG~~~~~~~l~~ 121 (334)
+.+....-+-.+++.=+.+.
T Consensus 83 ~~~rGG~g~~rlL~~LD~~~ 102 (327)
T 4h1h_A 83 LTVIGGFNSNQLLPYLDYDL 102 (327)
T ss_dssp EESCCCSCGGGGGGGCCHHH
T ss_pred EEcCCchhHHHHhhhcchhh
Confidence 88877665666665433433
No 481
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=35.82 E-value=90 Score=21.86 Aligned_cols=45 Identities=9% Similarity=0.176 Sum_probs=31.9
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEE
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVIS 135 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~ 135 (334)
-..+..++++. ++.+++++.+-..| .+-...+..+|++++++++.
T Consensus 24 G~~~v~kai~~-----gkakLViiA~D~~~------~~~~~~l~~lc~~~~VP~~~ 68 (121)
T 2lbw_A 24 GVKEVVKALRK-----GEKGLVVIAGDIWP------ADVISHIPVLCEDHSVPYIF 68 (121)
T ss_dssp SHHHHHHHHHH-----SCCCEEEECTTCSC------TTHHHHHHHHHHHTCCCEEE
T ss_pred cHHHHHHHHHc-----CCceEEEEeCCCCH------HHHHHHHHHHHHhcCCcEEE
Confidence 35667778876 37787777755444 12377788999999999863
No 482
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=35.72 E-value=1.7e+02 Score=23.51 Aligned_cols=101 Identities=12% Similarity=0.100 Sum_probs=52.6
Q ss_pred CcEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCC---------h------hhhhhhccCcEEEEEeCCCCCCccccH
Q 019899 18 SQIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPG---------F------DRDIRFRTGVELIPVHCRSTDNFAFSI 81 (334)
Q Consensus 18 ~~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~---------~------~~~~~~~~g~~v~~v~~~~~~~~~~~~ 81 (334)
+.+++.+|++.++- .+...|.+.|.+|++..-.-.. . ...+. ..|.++..+.++ --|.
T Consensus 10 ~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D-----v~~~ 83 (281)
T 3s55_A 10 GKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVE-KTGRRCISAKVD-----VKDR 83 (281)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHH-HTTCCEEEEECC-----TTCH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHH-hcCCeEEEEeCC-----CCCH
Confidence 34566666666764 4455666788877765432110 0 11122 235556666542 2356
Q ss_pred HHHHHHHHHHHHcCCceeEEEEeCCCCCccc--CCCHHHHHHHHH
Q 019899 82 TALDQAFNQARKRGVKVRGILICNPANPVGN--IIPRETLYELLD 124 (334)
Q Consensus 82 ~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 124 (334)
++++++++......+++..++.+....+.+. -.+.+++++..+
T Consensus 84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 128 (281)
T 3s55_A 84 AALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIG 128 (281)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 7777777665544446775554433333232 345666666554
No 483
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=35.66 E-value=45 Score=27.06 Aligned_cols=49 Identities=20% Similarity=0.278 Sum_probs=34.9
Q ss_pred ccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEEec
Q 019899 77 FAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVISDE 137 (334)
Q Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~ 137 (334)
|-+|.-.+.++... +..+|++... .++.++++++.+.|++.|+.+++|-
T Consensus 109 fi~~~~qi~ea~~~------GAD~ilLi~a------~l~~~~l~~l~~~a~~lGl~~lvEv 157 (251)
T 1i4n_A 109 FYIDTVQVKLASSV------GADAILIIAR------ILTAEQIKEIYEAAEELGMDSLVEV 157 (251)
T ss_dssp CCCSTHHHHHHHHT------TCSEEEEEGG------GSCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred CCCCHHHHHHHHHc------CCCEEEEecc------cCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 45665566553332 5666666543 3667889999999999999999984
No 484
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=35.65 E-value=83 Score=26.39 Aligned_cols=58 Identities=10% Similarity=0.059 Sum_probs=38.8
Q ss_pred CccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc---CcEEEEe
Q 019899 76 NFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK---NIHVISD 136 (334)
Q Consensus 76 ~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~vi~D 136 (334)
+..+|.+.+++.++..... ++..++++ .++--+..++.+|.+++++.+.+. +++||+=
T Consensus 27 dg~iD~~~l~~lv~~li~~--Gv~Gl~v~-GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaG 87 (316)
T 3e96_A 27 DGSIDWHHYKETVDRIVDN--GIDVIVPC-GNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAG 87 (316)
T ss_dssp TCCBCHHHHHHHHHHHHTT--TCCEECTT-SGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHc--CCCEEEeC-ccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEE
Confidence 5679999999888776544 45544433 333345678888888888877653 5777753
No 485
>2fcj_A Small toprim domain protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: MES; 1.30A {Geobacillus stearothermophilus} SCOP: c.136.1.1 PDB: 2i5r_A*
Probab=35.65 E-value=1.1e+02 Score=21.46 Aligned_cols=73 Identities=21% Similarity=0.127 Sum_probs=43.1
Q ss_pred CcEEEecCc-H-HHHHHHHHHhcCCCCeEEecCCCCCChhhh--h-hhccCcEEEEEeCCCCCCccccHHHHHHHHHHH
Q 019899 18 SQIVLTAGA-T-PAVEILCFCLADHGNALLVPSPYYPGFDRD--I-RFRTGVELIPVHCRSTDNFAFSITALDQAFNQA 91 (334)
Q Consensus 18 ~~i~~~~g~-~-~~~~~~~~~l~~~gd~vl~~~p~~~~~~~~--~-~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~ 91 (334)
-+++.|+|+ + +.+..+. .+.+....+++++|.+.+-.-- + +..-+++..+++-.+.+=.+.+.+.+.++|++.
T Consensus 27 ~~iI~t~Gsi~~~~l~~I~-~~~~~r~VIi~TD~D~~GekIRk~i~~~lp~~~hafi~r~~~gVE~a~~~~I~~aL~~~ 104 (119)
T 2fcj_A 27 VVIVCTNGTISDARLEELA-DELEGYDVYLLADADEAGEKLRRQFRRMFPEAEHLYIDRAYREVAAAPIWHLAQVLLRA 104 (119)
T ss_dssp CEEEECCSCCCHHHHHHHH-HHTTTSEEEEECCSSHHHHHHHHHHHHHCTTSEEECCCTTTCSTTTSCHHHHHHHHHHT
T ss_pred CCEEEeCCccCHHHHHHHH-HHhcCCCEEEEECCCccHHHHHHHHHHHCCCCcEEeccCCccCcccCCHHHHHHHHHhc
Confidence 357777776 1 1222222 3334555777888888763221 1 223567777777554455667888888888863
No 486
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=35.61 E-value=37 Score=28.95 Aligned_cols=53 Identities=15% Similarity=0.127 Sum_probs=35.3
Q ss_pred CcEEEecCcHHHHHHHHHHhc-CCCCeEEecCCCCCChhhhhhhccCcEEEEEeC
Q 019899 18 SQIVLTAGATPAVEILCFCLA-DHGNALLVPSPYYPGFDRDIRFRTGVELIPVHC 71 (334)
Q Consensus 18 ~~i~~~~g~~~~~~~~~~~l~-~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~ 71 (334)
..|+-.+++..++..+..+-. .=.-.|++|...-..-...++ .+|++|+.++-
T Consensus 88 ~~Vv~aSsGN~g~alA~~aa~~G~~~~IvmP~~~~~~k~~~~~-~~GA~Vv~v~~ 141 (344)
T 3vc3_A 88 TTLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMR-AFGAELILTDP 141 (344)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHH-HTTCEEEEECG
T ss_pred CEEEEeCCcHHHHHHHHHHHHcCCcEEEEECCCChHHHHHHHH-HcCCEEEEECC
Confidence 357777788888877766642 223456666655444555666 79999998873
No 487
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=35.30 E-value=73 Score=26.63 Aligned_cols=59 Identities=15% Similarity=0.082 Sum_probs=41.8
Q ss_pred CCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc---CcEEEEe
Q 019899 75 DNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK---NIHVISD 136 (334)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~vi~D 136 (334)
.+..+|.+.+++.++....+ ++..++++ .++--+..++.+|..++++.+.+. +++||+=
T Consensus 22 ~dg~iD~~~l~~lv~~li~~--Gv~gl~v~-GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaG 83 (309)
T 3fkr_A 22 DTGDLDLASQKRAVDFMIDA--GSDGLCIL-ANFSEQFAITDDERDVLTRTILEHVAGRVPVIVT 83 (309)
T ss_dssp TTSSBCHHHHHHHHHHHHHT--TCSCEEES-SGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred cCCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 45689999999998876554 45545544 344445678999999999988664 5777753
No 488
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=35.29 E-value=89 Score=26.16 Aligned_cols=58 Identities=10% Similarity=0.008 Sum_probs=37.8
Q ss_pred CCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHh---cCcEEEE
Q 019899 75 DNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFARE---KNIHVIS 135 (334)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~---~~~~vi~ 135 (334)
.+..+|.+.+++.++..... ++..++++ .++--+..++.+|.+++++.+.+ .+++||+
T Consensus 26 ~dg~iD~~~l~~lv~~li~~--Gv~gl~v~-GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpVia 86 (314)
T 3d0c_A 26 GTREIDWKGLDDNVEFLLQN--GIEVIVPN-GNTGEFYALTIEEAKQVATRVTELVNGRATVVA 86 (314)
T ss_dssp TTCCBCHHHHHHHHHHHHHT--TCSEECTT-SGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHc--CCCEEEEC-cccCChhhCCHHHHHHHHHHHHHHhCCCCeEEe
Confidence 34578999888888766554 34544433 33334556888888888887765 3577775
No 489
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=35.29 E-value=1.3e+02 Score=24.93 Aligned_cols=57 Identities=19% Similarity=0.278 Sum_probs=39.9
Q ss_pred CccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc---CcEEEE
Q 019899 76 NFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK---NIHVIS 135 (334)
Q Consensus 76 ~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~vi~ 135 (334)
+..+|.+.+++.++....+ ++..++++ .++--+..++.+|..++++.+.+. +++||+
T Consensus 15 dg~iD~~~l~~lv~~li~~--Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 74 (294)
T 2ehh_A 15 EGEVDYEALGNLIEFHVDN--GTDAILVC-GTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIA 74 (294)
T ss_dssp TTEECHHHHHHHHHHHHTT--TCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCcCHHHHHHHHHHHHHC--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 5589999999988876554 45555544 444446678999999988887653 577774
No 490
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=35.24 E-value=1.4e+02 Score=24.58 Aligned_cols=52 Identities=10% Similarity=0.161 Sum_probs=37.0
Q ss_pred CCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc
Q 019899 75 DNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK 129 (334)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~ 129 (334)
++..+|.+.+++.++....+ ++..++++ .++--+..++.+|..++++.+.+.
T Consensus 13 ~dg~iD~~~l~~lv~~li~~--Gv~gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~ 64 (288)
T 2nuw_A 13 KQGKVNVDALKTHAKNLLEK--GIDAIFVN-GTTGLGPALSKDEKRQNLNALYDV 64 (288)
T ss_dssp TTSCBCHHHHHHHHHHHHHT--TCCEEEET-STTTTGGGSCHHHHHHHHHHHTTT
T ss_pred CCCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHH
Confidence 45689999999988866554 45555544 444446678999999999988764
No 491
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=35.18 E-value=87 Score=26.51 Aligned_cols=78 Identities=15% Similarity=0.163 Sum_probs=46.4
Q ss_pred cCCCCeEEecCCCCCCh---hh-------hhhhccCcEEEEEeCCC-CCC-----ccccHHHHHHHHHHHHHcCCceeEE
Q 019899 38 ADHGNALLVPSPYYPGF---DR-------DIRFRTGVELIPVHCRS-TDN-----FAFSITALDQAFNQARKRGVKVRGI 101 (334)
Q Consensus 38 ~~~gd~vl~~~p~~~~~---~~-------~~~~~~g~~v~~v~~~~-~~~-----~~~~~~~l~~~l~~~~~~~~~~~~i 101 (334)
+++||+|-+..|+.+.. .. .++ ..|.+|+.-+.-. .++ ..--.++|.+++++ ..+++|
T Consensus 9 L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~-~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~D-----p~i~aI 82 (331)
T 4e5s_A 9 LKKGDEIRVISPSCSLSIVSTENRRLAVKRLT-ELGFHVTFSTHAEEIDRFASSSISSRVQDLHEAFRD-----PNVKAI 82 (331)
T ss_dssp CCTTCEEEEECSSSCGGGSCHHHHHHHHHHHH-HTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHC-----TTEEEE
T ss_pred CCCcCEEEEEeCCCCccccCHHHHHHHHHHHH-hCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhC-----CCCCEE
Confidence 57899999998887643 11 222 3688888766321 111 12244555556655 478988
Q ss_pred EEeCCCCCcccCCCHHHHHH
Q 019899 102 LICNPANPVGNIIPRETLYE 121 (334)
Q Consensus 102 ~~~~p~nptG~~~~~~~l~~ 121 (334)
+++....-+-.+++.=+.+.
T Consensus 83 ~~~rGG~g~~rlL~~lD~~~ 102 (331)
T 4e5s_A 83 LTTLGGYNSNGLLKYLDYDL 102 (331)
T ss_dssp EESCCCSCGGGGGGGCCHHH
T ss_pred EEccccccHHHHHhhcChhH
Confidence 88887665556655333333
No 492
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=35.11 E-value=1.2e+02 Score=25.01 Aligned_cols=57 Identities=16% Similarity=0.236 Sum_probs=39.9
Q ss_pred CccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhc---CcEEEE
Q 019899 76 NFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREK---NIHVIS 135 (334)
Q Consensus 76 ~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~vi~ 135 (334)
+..+|.+.+++.++..... ++..++++ .++--+..++.+|.+++++.+.+. +++||+
T Consensus 15 dg~iD~~~l~~lv~~li~~--Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 74 (289)
T 2yxg_A 15 NKEVDFDGLEENINFLIEN--GVSGIVAV-GTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIA 74 (289)
T ss_dssp TTEECHHHHHHHHHHHHHT--TCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCcCHHHHHHHHHHHHHC--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 5579999999988766554 45555544 444446678999999988887653 577774
No 493
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A*
Probab=34.95 E-value=94 Score=26.94 Aligned_cols=23 Identities=26% Similarity=0.141 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHhcCcEEEEecc
Q 019899 116 RETLYELLDFAREKNIHVISDEI 138 (334)
Q Consensus 116 ~~~l~~i~~~~~~~~~~vi~D~~ 138 (334)
.+.++++++.|+++|+.||+|-.
T Consensus 99 ~~~LD~~i~~A~k~GI~viL~l~ 121 (383)
T 3pzg_A 99 FERLDYTIAKAKELGIKLIIVLV 121 (383)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEcc
Confidence 67899999999999999999953
No 494
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=34.80 E-value=1.8e+02 Score=23.36 Aligned_cols=99 Identities=10% Similarity=0.113 Sum_probs=47.7
Q ss_pred cEEEecCcHHHH-HHHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 19 QIVLTAGATPAV-EILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 19 ~i~~~~g~~~~~-~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
.+++.+|++.++ ..+...|.+.|.+|++..-.-...........+..++..++ -|.+.++++++......++
T Consensus 10 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv-------~d~~~v~~~~~~~~~~~g~ 82 (270)
T 1yde_A 10 KVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDV-------TQEDDVKTLVSETIRRFGR 82 (270)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCT-------TSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCC-------CCHHHHHHHHHHHHHHcCC
Confidence 455555666666 44455566788777765432111112222112333333333 2566777776655443346
Q ss_pred eeEEEEeCCCC-Cccc--CCCHHHHHHHHH
Q 019899 98 VRGILICNPAN-PVGN--IIPRETLYELLD 124 (334)
Q Consensus 98 ~~~i~~~~p~n-ptG~--~~~~~~l~~i~~ 124 (334)
+..++.+.... +.+. -.+.++++++.+
T Consensus 83 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (270)
T 1yde_A 83 LDCVVNNAGHHPPPQRPEETSAQGFRQLLE 112 (270)
T ss_dssp CCEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHHH
Confidence 77555443322 2221 235555665554
No 495
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=34.65 E-value=1.7e+02 Score=23.15 Aligned_cols=101 Identities=19% Similarity=0.233 Sum_probs=49.4
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhh--ccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcC
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRF--RTGVELIPVHCRSTDNFAFSITALDQAFNQARKRG 95 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~--~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~ 95 (334)
..++.+|++.++- .+...|.+.|.+|++..-.-.......+. ..|.++..+..+ --|.++++++++......
T Consensus 15 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D-----~~~~~~~~~~~~~~~~~~ 89 (260)
T 2zat_A 15 KVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCH-----VGKAEDRERLVAMAVNLH 89 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECC-----TTCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcc-----CCCHHHHHHHHHHHHHHc
Confidence 4566666666664 44455667787777654321111111110 224455555442 125566666666544333
Q ss_pred CceeEEEEeCCCCC-ccc--CCCHHHHHHHHH
Q 019899 96 VKVRGILICNPANP-VGN--IIPRETLYELLD 124 (334)
Q Consensus 96 ~~~~~i~~~~p~np-tG~--~~~~~~l~~i~~ 124 (334)
+++..++.+....+ .+. -.+.++++++.+
T Consensus 90 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 121 (260)
T 2zat_A 90 GGVDILVSNAAVNPFFGNIIDATEEVWDKILH 121 (260)
T ss_dssp SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHH
Confidence 46775554433322 222 245556665554
No 496
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=34.64 E-value=1.7e+02 Score=23.19 Aligned_cols=74 Identities=14% Similarity=0.184 Sum_probs=40.6
Q ss_pred cEEEecCcHHHHH-HHHHHhcCCCCeEEecCCCCCChhhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCc
Q 019899 19 QIVLTAGATPAVE-ILCFCLADHGNALLVPSPYYPGFDRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVK 97 (334)
Q Consensus 19 ~i~~~~g~~~~~~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 97 (334)
..++.+|++.++- .+...|.+.|.+|++..-.-.. .. ....+..++ -|.+.++++++......++
T Consensus 22 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~----~~---~~~~~~~Dl-------~d~~~v~~~~~~~~~~~g~ 87 (253)
T 2nm0_A 22 RSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEP----PE---GFLAVKCDI-------TDTEQVEQAYKEIEETHGP 87 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCC----CT---TSEEEECCT-------TSHHHHHHHHHHHHHHTCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHh----hc---cceEEEecC-------CCHHHHHHHHHHHHHHcCC
Confidence 4566666666664 4455566788877765322111 11 233333333 3567777777765554457
Q ss_pred eeEEEEeCC
Q 019899 98 VRGILICNP 106 (334)
Q Consensus 98 ~~~i~~~~p 106 (334)
+..++.+..
T Consensus 88 iD~lv~nAg 96 (253)
T 2nm0_A 88 VEVLIANAG 96 (253)
T ss_dssp CSEEEEECS
T ss_pred CCEEEECCC
Confidence 785555443
No 497
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=34.60 E-value=35 Score=27.08 Aligned_cols=100 Identities=16% Similarity=-0.036 Sum_probs=53.1
Q ss_pred HHHHHHHHHHhcCCCCeEEecCCCCCCh--hhhhhhccCcEEEEEeCCCCCCccccHHHHHHHHHHHHHcCCceeEEEEe
Q 019899 27 TPAVEILCFCLADHGNALLVPSPYYPGF--DRDIRFRTGVELIPVHCRSTDNFAFSITALDQAFNQARKRGVKVRGILIC 104 (334)
Q Consensus 27 ~~~~~~~~~~l~~~gd~vl~~~p~~~~~--~~~~~~~~g~~v~~v~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~ 104 (334)
|.++..++..+...|.+|++..|....- ..... ..|.+...+++ .+.+++.+.+++.. ...++.+|++.
T Consensus 26 TT~ll~~~~r~~~~g~kVli~~~~~d~r~~~~i~s-rlG~~~~~~~~-------~~~~~i~~~i~~~~-~~~~~dvViID 96 (223)
T 2b8t_A 26 TAELIRRLHRLEYADVKYLVFKPKIDTRSIRNIQS-RTGTSLPSVEV-------ESAPEILNYIMSNS-FNDETKVIGID 96 (223)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECCCGGGCSSCCC-CCCCSSCCEEE-------SSTHHHHHHHHSTT-SCTTCCEEEEC
T ss_pred HHHHHHHHHHHHhcCCEEEEEEeccCchHHHHHHH-hcCCCcccccc-------CCHHHHHHHHHHHh-hCCCCCEEEEe
Confidence 3333333444445677888887665432 12333 44543322332 12344555444311 12357888888
Q ss_pred CCCCCcccCCCHHHHHHHHHHHHhcCcEEEEeccccc
Q 019899 105 NPANPVGNIIPRETLYELLDFAREKNIHVISDEIYGG 141 (334)
Q Consensus 105 ~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~ 141 (334)
..++ ++.+.++.+..++. .++.||+=.--.+
T Consensus 97 EaQ~-----l~~~~ve~l~~L~~-~gi~Vil~Gl~~d 127 (223)
T 2b8t_A 97 EVQF-----FDDRICEVANILAE-NGFVVIISGLDKN 127 (223)
T ss_dssp SGGG-----SCTHHHHHHHHHHH-TTCEEEEECCSBC
T ss_pred cCcc-----CcHHHHHHHHHHHh-CCCeEEEEecccc
Confidence 7765 55566676766665 4898887554344
No 498
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=34.48 E-value=29 Score=32.12 Aligned_cols=60 Identities=13% Similarity=0.194 Sum_probs=39.7
Q ss_pred cHHHHHHHHHHHHHcCCceeEEEEeCC----CC----Cc------ccCCCHHHHHHHHHHHHhcCcEEEEeccccc
Q 019899 80 SITALDQAFNQARKRGVKVRGILICNP----AN----PV------GNIIPRETLYELLDFAREKNIHVISDEIYGG 141 (334)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~~~~i~~~~p----~n----pt------G~~~~~~~l~~i~~~~~~~~~~vi~D~~~~~ 141 (334)
|+..+.+.|.-.+.- ++.+|.++-. .| |+ ...-+.++++++++-|+++||.||.|-++.-
T Consensus 171 ~~~gi~~~LdyLk~L--Gvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~lv~~~H~~Gi~VilD~V~NH 244 (585)
T 1wzl_A 171 DLKGVIDRLPYLEEL--GVTALYFTPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILDAVFNH 244 (585)
T ss_dssp CHHHHHHTHHHHHHH--TCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEECCSB
T ss_pred CHHHHHHHhHHHHHc--CCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEcCCc
Confidence 666666555333222 5667777633 11 11 1122678999999999999999999988754
No 499
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=34.42 E-value=31 Score=28.49 Aligned_cols=24 Identities=13% Similarity=0.326 Sum_probs=21.2
Q ss_pred CHHHHHHHHHHHHhcCcEEEEecc
Q 019899 115 PRETLYELLDFAREKNIHVISDEI 138 (334)
Q Consensus 115 ~~~~l~~i~~~~~~~~~~vi~D~~ 138 (334)
..+.+++++++|.++|++||+|--
T Consensus 62 ~~~~ld~~v~~a~~~Gi~Vild~H 85 (294)
T 2whl_A 62 DIDTIREVIELAEQNKMVAVVEVH 85 (294)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHCCCEEEEEec
Confidence 467899999999999999999853
No 500
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=34.38 E-value=43 Score=27.67 Aligned_cols=56 Identities=16% Similarity=0.088 Sum_probs=40.1
Q ss_pred CCccccHHHHHHHHHHHHHcCCceeEEEEeCCCCCcccCCCHHHHHHHHHHHHhcCcEEEE
Q 019899 75 DNFAFSITALDQAFNQARKRGVKVRGILICNPANPVGNIIPRETLYELLDFAREKNIHVIS 135 (334)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~vi~ 135 (334)
++..+|.+.+++.++....+ +..+++ ..++--+..++.+|..++++.+.+ +++||+
T Consensus 12 ~dg~iD~~~l~~lv~~li~~---v~gl~v-~GttGE~~~Ls~~Er~~v~~~~~~-rvpvia 67 (283)
T 2pcq_A 12 REGRLDEEAFRELAQALEPL---VDGLLV-YGSNGEGVHLTPEERARGLRALRP-RKPFLV 67 (283)
T ss_dssp TTCCBCHHHHHHHHHHHGGG---SSCCEE-TCTTTTGGGSCHHHHHHHHHTCCC-SSCCEE
T ss_pred CCCCcCHHHHHHHHHHHHhh---CCEEEE-CCcCcCchhcCHHHHHHHHHHHHh-CCcEEE
Confidence 45689999999998865432 443443 344445667899999999998887 777774
Done!