BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019900
(334 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LP17|CCD1_PEA Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Pisum sativum
GN=CCD1 PE=2 SV=1
Length = 541
Score = 598 bits (1542), Expect = e-170, Method: Compositional matrix adjust.
Identities = 279/334 (83%), Positives = 308/334 (92%)
Query: 1 MLDYDKRLQHSFTAHPKVDPYTGEMFTFGYAHTPPYITYRVISKDGFMHDPVPITVSDPI 60
MLDYDKRL H+FTAHPKVDP+TGEMFTFGY+HT PY+TYRVISKDGFM DPVPIT+SDP+
Sbjct: 208 MLDYDKRLGHNFTAHPKVDPFTGEMFTFGYSHTAPYVTYRVISKDGFMQDPVPITISDPV 267
Query: 61 MMHDFAITENYAIFMDLPLYFRPKEMVKENKLIFTFDDTKKARFGILPRYAKNEAQMKWF 120
MMHDFAITENY+IFMDLPLYFRPKEMVK LIF+FD TKKARFG+LPRYAK++ ++WF
Sbjct: 268 MMHDFAITENYSIFMDLPLYFRPKEMVKNKTLIFSFDSTKKARFGVLPRYAKDDKHIRWF 327
Query: 121 ELPNCFIFHNANAWEEEDEVVLITCRLDKPDLDMVNGAVKEKLENFSNELYEMRFNLKTG 180
ELPNCFIFHNANAWEEEDE+VLITCRL+ P+LD+V GAVKEKL+NFSNELYEMRFN+KTG
Sbjct: 328 ELPNCFIFHNANAWEEEDEIVLITCRLENPNLDVVGGAVKEKLDNFSNELYEMRFNMKTG 387
Query: 181 LASQKRLSASAVDFPRVNECYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPDEEKTKLE 240
ASQK+LSAS VDFPRVNE YTGRKQRYVYGT LDSIAKVTGIIKFDLHAEPD KTKLE
Sbjct: 388 EASQKKLSASTVDFPRVNESYTGRKQRYVYGTTLDSIAKVTGIIKFDLHAEPDSGKTKLE 447
Query: 241 VGGNVRGIFDLGPGRFGSEAVFVPREPGTSSEEDVGYLIFFSHDEKTGKSSVNVIDAKTM 300
VGGNV+G++DLGPGRFGSEAV+VPR PGT SEED GYLIFF HDE TGKS V+VIDAK M
Sbjct: 448 VGGNVQGLYDLGPGRFGSEAVYVPRVPGTDSEEDDGYLIFFVHDENTGKSFVHVIDAKRM 507
Query: 301 SADPVAVVELPHRVPYGFHAFFVSEEQLEEQAKL 334
SA+PVAVVELP RVPYGFHAFFV+E+QL+EQAK
Sbjct: 508 SAEPVAVVELPQRVPYGFHAFFVTEDQLQEQAKF 541
>sp|Q94IR2|CCD1_PHAVU Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Phaseolus
vulgaris GN=CCD1 PE=1 SV=1
Length = 543
Score = 595 bits (1535), Expect = e-169, Method: Compositional matrix adjust.
Identities = 280/334 (83%), Positives = 304/334 (91%)
Query: 1 MLDYDKRLQHSFTAHPKVDPYTGEMFTFGYAHTPPYITYRVISKDGFMHDPVPITVSDPI 60
MLDYDKRL HSFTAHPKVDP+TGEMF+FGYAHTPPYITYRVISKDG+MHDPVPIT+SDPI
Sbjct: 210 MLDYDKRLGHSFTAHPKVDPFTGEMFSFGYAHTPPYITYRVISKDGYMHDPVPITISDPI 269
Query: 61 MMHDFAITENYAIFMDLPLYFRPKEMVKENKLIFTFDDTKKARFGILPRYAKNEAQMKWF 120
MMHDFAITENYA+FMDLPL FRPKEMVK LIF+FD TKKARFG+LPRYAK+E ++WF
Sbjct: 270 MMHDFAITENYAVFMDLPLIFRPKEMVKNKTLIFSFDSTKKARFGVLPRYAKDEQHIRWF 329
Query: 121 ELPNCFIFHNANAWEEEDEVVLITCRLDKPDLDMVNGAVKEKLENFSNELYEMRFNLKTG 180
ELPNCFIFHNANAWEEEDEVVLITCRL P LD V G V+EKLENFSNELYEMRFN+KTG
Sbjct: 330 ELPNCFIFHNANAWEEEDEVVLITCRLQNPKLDNVGGTVQEKLENFSNELYEMRFNMKTG 389
Query: 181 LASQKRLSASAVDFPRVNECYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPDEEKTKLE 240
ASQK+LSAS VDFPRVNE YTGRKQRYVYGT LDSIAKVTGIIKFDLHAEPD K KLE
Sbjct: 390 EASQKKLSASTVDFPRVNENYTGRKQRYVYGTTLDSIAKVTGIIKFDLHAEPDHGKEKLE 449
Query: 241 VGGNVRGIFDLGPGRFGSEAVFVPREPGTSSEEDVGYLIFFSHDEKTGKSSVNVIDAKTM 300
VGGNV+G++DLGPG+FGSEAV++PR PG SEED GYL+ F HDE GKS V+VIDAKTM
Sbjct: 450 VGGNVQGLYDLGPGKFGSEAVYIPRVPGIESEEDDGYLVLFVHDENAGKSFVHVIDAKTM 509
Query: 301 SADPVAVVELPHRVPYGFHAFFVSEEQLEEQAKL 334
SADPVAVVELP+RVPYGFHAFFV+EEQL+EQAKL
Sbjct: 510 SADPVAVVELPNRVPYGFHAFFVTEEQLQEQAKL 543
>sp|O65572|CCD1_ARATH Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Arabidopsis
thaliana GN=CCD1 PE=1 SV=2
Length = 538
Score = 584 bits (1505), Expect = e-166, Method: Compositional matrix adjust.
Identities = 271/332 (81%), Positives = 304/332 (91%), Gaps = 3/332 (0%)
Query: 1 MLDYDKRLQHSFTAHPKVDPYTGEMFTFGYAHTPPYITYRVISKDGFMHDPVPITVSDPI 60
++DYDKRL HSFTAHPKVDP TGEMFTFGY+HTPPY+TYRVISKDG MHDPVPIT+S+PI
Sbjct: 208 IIDYDKRLTHSFTAHPKVDPVTGEMFTFGYSHTPPYLTYRVISKDGIMHDPVPITISEPI 267
Query: 61 MMHDFAITENYAIFMDLPLYFRPKEMVKENKLIFTFDDTKKARFGILPRYAKNEAQMKWF 120
MMHDFAITE YAIFMDLP++FRPKEMVKE K+I++FD TKKARFG+LPRYAK+E ++WF
Sbjct: 268 MMHDFAITETYAIFMDLPMHFRPKEMVKEKKMIYSFDPTKKARFGVLPRYAKDELMIRWF 327
Query: 121 ELPNCFIFHNANAWEEEDEVVLITCRLDKPDLDMVNGAVKEKLENFSNELYEMRFNLKTG 180
ELPNCFIFHNANAWEEEDEVVLITCRL+ PDLDMV+G VKEKLENF NELYEMRFN+KTG
Sbjct: 328 ELPNCFIFHNANAWEEEDEVVLITCRLENPDLDMVSGKVKEKLENFGNELYEMRFNMKTG 387
Query: 181 LASQKRLSASAVDFPRVNECYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPDEEKTKLE 240
ASQK+LSASAVDFPR+NECYTG+KQRYVYGTILDSIAKVTGIIKFDLHAE + K LE
Sbjct: 388 SASQKKLSASAVDFPRINECYTGKKQRYVYGTILDSIAKVTGIIKFDLHAEAETGKRMLE 447
Query: 241 VGGNVRGIFDLGPGRFGSEAVFVPREPGTSSEEDVGYLIFFSHDEKTGKSSVNVIDAKTM 300
VGGN++GI+DLG GR+GSEA++VPRE ++EED GYLIFF HDE TGKS V VIDAKTM
Sbjct: 448 VGGNIKGIYDLGEGRYGSEAIYVPRE---TAEEDDGYLIFFVHDENTGKSCVTVIDAKTM 504
Query: 301 SADPVAVVELPHRVPYGFHAFFVSEEQLEEQA 332
SA+PVAVVELPHRVPYGFHA FV+EEQL+EQ
Sbjct: 505 SAEPVAVVELPHRVPYGFHALFVTEEQLQEQT 536
>sp|Q84KG5|CCD_CROSA Carotenoid 9,10(9',10')-cleavage dioxygenase OS=Crocus sativus
GN=CCD PE=1 SV=1
Length = 546
Score = 580 bits (1496), Expect = e-165, Method: Compositional matrix adjust.
Identities = 274/331 (82%), Positives = 300/331 (90%)
Query: 1 MLDYDKRLQHSFTAHPKVDPYTGEMFTFGYAHTPPYITYRVISKDGFMHDPVPITVSDPI 60
+LDYDKRL HSFTAHPKVDP+T EMFTFGYAHTPPY+TYRVISKDG M DPVPIT+ +
Sbjct: 212 LLDYDKRLSHSFTAHPKVDPFTDEMFTFGYAHTPPYVTYRVISKDGVMRDPVPITIPASV 271
Query: 61 MMHDFAITENYAIFMDLPLYFRPKEMVKENKLIFTFDDTKKARFGILPRYAKNEAQMKWF 120
MMHDFAITENY+IFMDLPLYF+PKEMVK KLIF+FD TKKARFG+LPRYAK+++ ++WF
Sbjct: 272 MMHDFAITENYSIFMDLPLYFQPKEMVKGGKLIFSFDATKKARFGVLPRYAKDDSLIRWF 331
Query: 121 ELPNCFIFHNANAWEEEDEVVLITCRLDKPDLDMVNGAVKEKLENFSNELYEMRFNLKTG 180
ELPNCFIFHNANAWEE DEVVLITCRL+ PDLDMVNGAVKEKLENF NELYEMRFN+KTG
Sbjct: 332 ELPNCFIFHNANAWEEGDEVVLITCRLENPDLDMVNGAVKEKLENFKNELYEMRFNMKTG 391
Query: 181 LASQKRLSASAVDFPRVNECYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPDEEKTKLE 240
ASQK+LS SAVDFPR+NE YT RKQRYVYGTILD+I KV GIIKFDLHAEP+ K KLE
Sbjct: 392 AASQKQLSVSAVDFPRINESYTTRKQRYVYGTILDNITKVKGIIKFDLHAEPEAGKKKLE 451
Query: 241 VGGNVRGIFDLGPGRFGSEAVFVPREPGTSSEEDVGYLIFFSHDEKTGKSSVNVIDAKTM 300
VGGNV+GIFDLGPGR+GSEAVFVPRE G SEED GYLIFF HDE TGKS VNVIDAKTM
Sbjct: 452 VGGNVQGIFDLGPGRYGSEAVFVPRERGIKSEEDDGYLIFFVHDENTGKSEVNVIDAKTM 511
Query: 301 SADPVAVVELPHRVPYGFHAFFVSEEQLEEQ 331
SA+PVAVVELP+RVPYGFHAFFV+EEQL+ Q
Sbjct: 512 SAEPVAVVELPNRVPYGFHAFFVNEEQLQWQ 542
>sp|O49675|CCD4_ARATH Probable carotenoid cleavage dioxygenase 4, chloroplastic
OS=Arabidopsis thaliana GN=CCD4 PE=1 SV=1
Length = 595
Score = 223 bits (569), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 128/334 (38%), Positives = 191/334 (57%), Gaps = 20/334 (5%)
Query: 3 DYDKRLQHSFTAHPKVDPYTGEMFTFGYAHTPPYITYRVISKDGFMHDPVPI-TVSDPIM 61
D+D +L S TAHPK DP TGE F F Y PP++TY G VPI +++ P
Sbjct: 275 DFDGKLAMSMTAHPKTDPITGETFAFRYGPVPPFLTYFRFDSAGKKQRDVPIFSMTSPSF 334
Query: 62 MHDFAITENYAIFMDLPLYFRPK--EMVKENKLIFTFDDTKKARFGILPRYAKNEAQMKW 119
+HDFAIT+ +AIF ++ L R ++V E D+ K R G++P+YA +E++MKW
Sbjct: 335 LHDFAITKRHAIFAEIQLGMRMNMLDLVLEGGSPVGTDNGKTPRLGVIPKYAGDESEMKW 394
Query: 120 FELPNCFIFHNANAWEEED--EVVLITCRLDKPDLDMVNGAVKEKLENFSNELYEMRFNL 177
FE+P I H NAW+E+D VVLI P++ + + E+++ + +++ +L
Sbjct: 395 FEVPGFNIIHAINAWDEDDGNSVVLIA-----PNIMSIEHTL-ERMDLVHALVEKVKIDL 448
Query: 178 KTGLASQKRLSASAVDFPRVNECYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPDEEKT 237
TG+ + +SA +DF +N + GR RYVY I D + K++G++K D+ ++ T
Sbjct: 449 VTGIVRRHPISARNLDFAVINPAFLGRCSRYVYAAIGDPMPKISGVVKLDVSKGDRDDCT 508
Query: 238 KLEVGGNVRGIFDLGPGRFGSEAVFVPREPGT-SSEEDVGYLIFFSHDEKTGKSSVNVID 296
R ++ G G +G E FV R+PG +EED GY++ + HDE TG+S V+D
Sbjct: 509 V------ARRMY--GSGCYGGEPFFVARDPGNPEAEEDDGYVVTYVHDEVTGESKFLVMD 560
Query: 297 AKTMSADPVAVVELPHRVPYGFHAFFVSEEQLEE 330
AK+ + VA V LP RVPYGFH FV E L +
Sbjct: 561 AKSPELEIVAAVRLPRRVPYGFHGLFVKESDLNK 594
>sp|Q84K96|ZCD_CROSA Zeaxanthin 7,8(7',8')-cleavage dioxygenase, chromoplast OS=Crocus
sativus GN=ZCD PE=1 SV=1
Length = 369
Score = 218 bits (555), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 129/328 (39%), Positives = 186/328 (56%), Gaps = 24/328 (7%)
Query: 11 SFTAHPKVDPYTGEMFTFGYAHTPPYITYRVISKDGFMHDP-VPI-TVSDPIMMHDFAIT 68
S TAHPK DP TGE F+F Y PY+TY DG P VPI + +P +HDFAIT
Sbjct: 58 STTAHPKTDPVTGETFSFSYGPIQPYVTYSRYDCDGKKSGPDVPIFSFKEPSFVHDFAIT 117
Query: 69 ENYAIFMDLPLYFRPKEMVKENKLIFTFDDTKKARFGILPRYAKNEAQMKWFELPNCFIF 128
E+YA+F D+ + +P E+V+ ++I D K R G+LPRYA ++++M+WF++P +
Sbjct: 118 EHYAVFPDIQIVMKPAEIVRGRRMIGP-DLEKVPRLGLLPRYATSDSEMRWFDVPGFNMV 176
Query: 129 HNANAWEEED-EVVLITCRLDKPDLDMVNGAVKEKLENFSNELYEMRFNLKTGLASQKRL 187
H NAWEEE EVV+I P++ + A+ ++ + + R LK+G S+ L
Sbjct: 177 HVVNAWEEEGGEVVVIVA----PNVSPIENAI-DRFDLLHVSVEMARIELKSGSVSRTLL 231
Query: 188 SASAVDFPRVNECYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPDEEKTKLEVGGNVRG 247
SA +DF ++ Y+GRK RY Y + D + K+ G++K D E+ G
Sbjct: 232 SAENLDFGVIHRGYSGRKSRYAYLGVGDPMPKIRGVVKVDF-----------ELAGRGEC 280
Query: 248 IF---DLGPGRFGSEAVFVPREPGTSS-EEDVGYLIFFSHDEKTGKSSVNVIDAKTMSAD 303
+ + G G FG E FVP S EED GY++ + HDE G+SS V+DA++ +
Sbjct: 281 VVARREFGVGCFGGEPFFVPASSKKSGGEEDDGYVVSYLHDEGKGESSFVVMDARSPELE 340
Query: 304 PVAVVELPHRVPYGFHAFFVSEEQLEEQ 331
+A V LP RVPYGFH FV+E +L Q
Sbjct: 341 ILAEVVLPRRVPYGFHGLFVTEAELLSQ 368
>sp|Q9M9F5|NCED9_ARATH 9-cis-epoxycarotenoid dioxygenase NCED9, chloroplastic
OS=Arabidopsis thaliana GN=NCED9 PE=2 SV=1
Length = 657
Score = 217 bits (552), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/335 (38%), Positives = 186/335 (55%), Gaps = 29/335 (8%)
Query: 3 DYDKRLQHSFTAHPKVDPYTGEMFTFGY-AHTPPYITYRVISKDGFMHDPVPITVSDPIM 61
D+D +L+ + AHPK+DP T E+F Y + PY+ Y + DG V I + P M
Sbjct: 345 DFDGQLKSTMIAHPKIDPETRELFALSYDVVSKPYLKYFRFTSDGEKSPDVEIPLDQPTM 404
Query: 62 MHDFAITENYAIFMDLPLYFRPKEMVKENKLIFTFDDTKKARFGILPRYAKNEAQMKWFE 121
+HDFAITEN+ + D + FR EM++ + +D+ KK+RFGIL + AK+ + ++W E
Sbjct: 405 IHDFAITENFVVIPDQQVVFRLPEMIRGGSPV-VYDEKKKSRFGILNKNAKDASSIQWIE 463
Query: 122 LPNCFIFHNANAWE--EEDEVVLITCRLDKPDLDMVNGAVKEKLENFSNELYEMRFNLKT 179
+P+CF FH N+WE E DEVV+I + PD E E + L E+R NLKT
Sbjct: 464 VPDCFCFHLWNSWEEPETDEVVVIGSCMTPPD-----SIFNEHDETLQSVLSEIRLNLKT 518
Query: 180 GLASQKRLSASAVDFPR--VNECYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPDEEKT 237
G ++++ + + V+ VN GRK RY Y + + KV+G K DL
Sbjct: 519 GESTRRPVISEQVNLEAGMVNRNLLGRKTRYAYLALTEPWPKVSGFAKVDLST------- 571
Query: 238 KLEVGGNVRGIFDLGPGRFGSEAVFVPREPGTSSEEDVGYLIFFSHDEKTGKSSVNVIDA 297
G +R + G G++G E +F+P G EED GY++ F HDE+ KS + +I+A
Sbjct: 572 -----GEIRK-YIYGEGKYGGEPLFLPSGDG---EEDGGYIMVFVHDEEKVKSELQLINA 622
Query: 298 KTMSADPVAVVELPHRVPYGFHAFFVSEEQLEEQA 332
M + A V LP RVPYGFH F+S+E L +QA
Sbjct: 623 VNMKLE--ATVTLPSRVPYGFHGTFISKEDLSKQA 655
>sp|O24592|NCED1_MAIZE 9-cis-epoxycarotenoid dioxygenase 1, chloroplastic OS=Zea mays
GN=VP14 PE=1 SV=2
Length = 604
Score = 205 bits (522), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/339 (35%), Positives = 182/339 (53%), Gaps = 30/339 (8%)
Query: 3 DYDKRLQHSFTAHPKVDPYTGEMFTFGY-AHTPPYITYRVISKDGFMHDPVPITVSDPIM 61
D+D +L + AHPK+DP TGE+ Y PY+ Y DG D V I + P M
Sbjct: 286 DFDGQLGCAMIAHPKLDPATGELHALSYDVIKRPYLKYFYFRPDGTKSDDVEIPLEQPTM 345
Query: 62 MHDFAITENYAIFMDLPLYFRPKEMVKENKLIFTFDDTKKARFGILPRYAKNEAQMKWFE 121
+HDFAITEN + D + F+ +EM++ + D K +RFG+LP++A + ++M W +
Sbjct: 346 IHDFAITENLVVVPDHQVVFKLQEMLRGGSPV-VLDKEKTSRFGVLPKHAADASEMAWVD 404
Query: 122 LPNCFIFHNANAWEEE--DEVVLITCRLDKPDLDMVNGAVKEKLENFSNELYEMRFNLKT 179
+P+CF FH NAWE+E EVV+I + D E E + L E+R + +T
Sbjct: 405 VPDCFCFHLWNAWEDEATGEVVVIGSCMTPAD-----SIFNESDERLESVLTEIRLDART 459
Query: 180 GLASQKRLSASA----VDFPRVNECYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPDEE 235
G ++++ + + ++ VN GR+ RY Y + + KV+G K DL E
Sbjct: 460 GRSTRRAVLPPSQQVNLEVGMVNRNLLGRETRYAYLAVAEPWPKVSGFAKVDLST---GE 516
Query: 236 KTKLEVGGNVRGIFDLGPGRFGSEAVFVPREPGTSSE--EDVGYLIFFSHDEKTGKSSVN 293
TK F+ G GRFG E FVP +P + ED GY++ F HDE+ G S +
Sbjct: 517 LTK----------FEYGEGRFGGEPCFVPMDPAAAHPRGEDDGYVLTFVHDERAGTSELL 566
Query: 294 VIDAKTMSADPVAVVELPHRVPYGFHAFFVSEEQLEEQA 332
V++A M + A V+LP RVP+GFH F++ ++LE QA
Sbjct: 567 VVNAADMRLE--ATVQLPSRVPFGFHGTFITGQELEAQA 603
>sp|Q9LRR7|NCED3_ARATH 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic
OS=Arabidopsis thaliana GN=NCED3 PE=2 SV=1
Length = 599
Score = 203 bits (516), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/338 (37%), Positives = 186/338 (55%), Gaps = 32/338 (9%)
Query: 2 LDYDKRLQHSFTAHPKVDPYTGEMFTFGY-AHTPPYITYRVISKDGFMHDPVPITVSDPI 60
D+D +L+ + AHPKVDP +GE+F Y + PY+ Y S DG V I + P
Sbjct: 284 FDFDGQLESTMIAHPKVDPESGELFALSYDVVSKPYLKYFRFSPDGTKSPDVEIQLDQPT 343
Query: 61 MMHDFAITENYAIFMDLPLYFRPKEMVKENKLIFTFDDTKKARFGILPRYAKNEAQMKWF 120
MMHDFAITEN+ + D + F+ EM++ + +D K ARFGIL +YA++ + +KW
Sbjct: 344 MMHDFAITENFVVVPDQQVVFKLPEMIRGGSPV-VYDKNKVARFGILDKYAEDSSNIKWI 402
Query: 121 ELPNCFIFHNANAWE--EEDEVVLITCRLDKPDLDMVNGAVKEKLENFSNELYEMRFNLK 178
+ P+CF FH NAWE E DEVV+I + PD E EN + L E+R NLK
Sbjct: 403 DAPDCFCFHLWNAWEEPETDEVVVIGSCMTPPD-----SIFNESDENLKSVLSEIRLNLK 457
Query: 179 TGLASQKRLSASA-----VDFPRVNECYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPD 233
TG ++++ + ++ ++ VN GRK ++ Y + + KV+G K DL
Sbjct: 458 TGESTRRPIISNEDQQVNLEAGMVNRNMLGRKTKFAYLALAEPWPKVSGFAKVDL----- 512
Query: 234 EEKTKLEVGGNVRGIFDLGPGRFGSEAVFVPREPGTSSEEDVGYLIFFSHDEKTGKSSVN 293
T EV ++ G R+G E +F+P EED GY++ F HDEKT KS +
Sbjct: 513 ---TTGEVKKHL-----YGDNRYGGEPLFLPG---EGGEEDEGYILCFVHDEKTWKSELQ 561
Query: 294 VIDAKTMSADPVAVVELPHRVPYGFHAFFVSEEQLEEQ 331
+++A ++ + A V+LP RVPYGFH F+ + L +Q
Sbjct: 562 IVNAVSLEVE--ATVKLPSRVPYGFHGTFIGADDLAKQ 597
>sp|Q9LRM7|NCED6_ARATH 9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic
OS=Arabidopsis thaliana GN=NCED6 PE=2 SV=1
Length = 577
Score = 197 bits (500), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/336 (36%), Positives = 173/336 (51%), Gaps = 31/336 (9%)
Query: 4 YDKRLQHSFTAHPKVDPYTGEMFTFGY-AHTPPYITYRVISKDGFMHDPVPITVSDPIMM 62
+D ++ S AHPKVD TG++ T Y P++ Y + G V IT+ +P M+
Sbjct: 265 FDDQIDSSVIAHPKVDATTGDLHTLSYNVLKKPHLRYLKFNTCGKKTRDVEITLPEPTMI 324
Query: 63 HDFAITENYAIFMDLPLYFRPKEMVKENKLIFTFDDTKKARFGILPRYAKNEAQMKWFEL 122
HDFAITEN+ + D + F+ EM++ + + K ARFG+L + + + W ++
Sbjct: 325 HDFAITENFVVIPDQQMVFKLSEMIRGGSPVIYVKE-KMARFGVLSKQDLTGSDINWVDV 383
Query: 123 PNCFIFHNANAWEEEDE-----VVLITCRLDKPDLDMVNGAVKEKLENFSNELYEMRFNL 177
P+CF FH NAWEE E +V+I + PD E E EL E+R N+
Sbjct: 384 PDCFCFHLWNAWEERTEEGDPVIVVIGSCMSPPDT-----IFSESGEPTRVELSEIRLNM 438
Query: 178 KTGLASQKRL-SASAVDFPRVNECYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPDEEK 236
+T +++K + + ++ +N Y GRK ++VY I D K +GI K D+ E
Sbjct: 439 RTKESNRKVIVTGVNLEAGHINRSYVGRKSQFVYIAIADPWPKCSGIAKVDIQNGTVSE- 497
Query: 237 TKLEVGGNVRGIFDLGPGRFGSEAVFVPREPGTSSEEDVGYLIFFSHDEKTGKSSVNVID 296
F+ GP RFG E FVP G EED GY++ F DE+ +S V+D
Sbjct: 498 ------------FNYGPSRFGGEPCFVPEGEG---EEDKGYVMGFVRDEEKDESEFVVVD 542
Query: 297 AKTMSADPVAVVELPHRVPYGFHAFFVSEEQLEEQA 332
A M VA V LP RVPYGFH FVSE QL+EQ
Sbjct: 543 ATDMKQ--VAAVRLPERVPYGFHGTFVSENQLKEQV 576
>sp|Q9C6Z1|NCED5_ARATH Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic
OS=Arabidopsis thaliana GN=NCED5 PE=1 SV=1
Length = 589
Score = 196 bits (499), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/337 (37%), Positives = 178/337 (52%), Gaps = 29/337 (8%)
Query: 3 DYDKRLQHSFTAHPKVDPYTGEMFTFGY-AHTPPYITYRVISKDGFMHDPVPITVSDPIM 61
D+D +L + AHPK+DP T E+F Y PY+ Y S +G V I ++ P M
Sbjct: 275 DFDGQLSSAMIAHPKIDPVTKELFALSYDVVKKPYLKYFKFSPEGEKSPDVEIPLASPTM 334
Query: 62 MHDFAITENYAIFMDLPLYFRPKEMVKENKLIFTFDDTKKARFGILPRYAKNEAQMKWFE 121
MHDFAITEN+ + D + F+ +M K +D K +RFGILPR AK+ ++M W E
Sbjct: 335 MHDFAITENFVVIPDQQVVFKLSDMFL-GKSPVKYDGEKISRFGILPRNAKDASEMVWVE 393
Query: 122 LPNCFIFHNANAWE--EEDEVVLITCRLDKPDLDMVNGAVKEKLENFSNELYEMRFNLKT 179
P F FH NAWE E DEVV+I + D E E ++ L E+R NLKT
Sbjct: 394 SPETFCFHLWNAWESPETDEVVVIGSCMTPAD-----SIFNECDEQLNSVLSEIRLNLKT 448
Query: 180 GLASQKRLSASAVDF----PRVNECYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPDEE 235
G ++++ + +V VN GRK RY Y I + KV+G K DL
Sbjct: 449 GKSTRRTIIPGSVQMNLEAGMVNRNLLGRKTRYAYLAIAEPWPKVSGFAKVDLST----- 503
Query: 236 KTKLEVGGNVRGIFDLGPGRFGSEAVFVPREPGTSSEEDVGYLIFFSHDEKTGKSSVNVI 295
G V+ F G ++G E F+PR + E+D GY++ F HDE++ +S ++++
Sbjct: 504 -------GEVKNHF-YGGKKYGGEPFFLPRGLESDGEDD-GYIMSFVHDEESWESELHIV 554
Query: 296 DAKTMSADPVAVVELPHRVPYGFHAFFVSEEQLEEQA 332
+A T+ + A V+LP RVPYGFH FV+ + QA
Sbjct: 555 NAVTLELE--ATVKLPSRVPYGFHGTFVNSADMLNQA 589
>sp|Q9M6E8|NCED1_PHAVU 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic OS=Phaseolus
vulgaris GN=NCED1 PE=2 SV=1
Length = 615
Score = 189 bits (481), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/337 (34%), Positives = 177/337 (52%), Gaps = 32/337 (9%)
Query: 3 DYDKRLQHSFTAHPKVDPYTGEMFTFGY-AHTPPYITYRVISKDGFMHDPVPITVSDPIM 61
D++ +L + AHPK+DP G++ Y PY+ Y S DG V I + +P M
Sbjct: 304 DFNGQLNSTMIAHPKLDPVNGDLHALSYDVVQKPYLKYFRFSADGVKSPDVEIPLKEPTM 363
Query: 62 MHDFAITENYAIFMDLPLYFRPKEMVKENKLIFTFDDTKKARFGILPRYAKNEAQMKWFE 121
MHDFAITEN+ + D + F+ EM+ + +D K +RFGIL + AK+ M+W +
Sbjct: 364 MHDFAITENFVVVPDQQVVFKLTEMITGGSPV-VYDKNKTSRFGILDKNAKDANAMRWID 422
Query: 122 LPNCFIFHNANAWE--EEDEVVLITCRLDKPDLDMVNGAVKEKLENFSNELYEMRFNLKT 179
P CF FH NAWE E DE+V+I + D E E+ + L E+R NL+T
Sbjct: 423 APECFCFHLWNAWEEPETDEIVVIGSCMTPAD-----SIFNECDESLKSVLSEIRLNLRT 477
Query: 180 GLASQKRLSASA----VDFPRVNECYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPDEE 235
G ++++ + + A ++ VN GRK ++ Y + + KV+G K DL +
Sbjct: 478 GKSTRRPIISDAEQVNLEAGMVNRNKLGRKTQFAYLALAEPWPKVSGFAKVDLFS----- 532
Query: 236 KTKLEVGGNVRGIFDLGPGRFGSEAVFVPREPGTSSEEDVGYLIFFSHDEKTGKSSVNVI 295
G V+ + G +FG E +F+P EE GY++ F HDEK KS + ++
Sbjct: 533 -------GEVQK-YMYGEEKFGGEPLFLP----NGEEEGDGYILAFVHDEKEWKSELQIV 580
Query: 296 DAKTMSADPVAVVELPHRVPYGFHAFFVSEEQLEEQA 332
+A+ + + A ++LP RVPYGFH F+ + L +QA
Sbjct: 581 NAQNLKLE--ASIKLPSRVPYGFHGTFIHSKDLRKQA 615
>sp|O49505|NCED2_ARATH 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic
OS=Arabidopsis thaliana GN=NCED2 PE=2 SV=1
Length = 583
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/336 (33%), Positives = 166/336 (49%), Gaps = 28/336 (8%)
Query: 3 DYDKRLQHSFTAHPKVDPYTGEMFTFGY-AHTPPYITYRVISKDGFMHDPVPITVSDPIM 61
D+D +L+ + AHPK+DP T E+ Y PY+ Y S DG + I + P M
Sbjct: 268 DFDGQLKSAMIAHPKLDPVTKELHALSYDVVKKPYLKYFRFSPDGVKSPELEIPLETPTM 327
Query: 62 MHDFAITENYAIFMDLPLYFRPKEMVKENKLIFTFDDTKKARFGILPRYAKNEAQMKWFE 121
+HDFAITEN+ + D + F+ EM+ K FD K +R GI+P+ A +Q+ W
Sbjct: 328 IHDFAITENFVVIPDQQVVFKLGEMI-SGKSPVVFDGEKVSRLGIMPKDATEASQIIWVN 386
Query: 122 LPNCFIFHNANAWE--EEDEVVLITCRLDKPDLDMVNGAVKEKLENFSNELYEMRFNLKT 179
P F FH NAWE E +E+V+I + D E+ E+ + L E+R NL+T
Sbjct: 387 SPETFCFHLWNAWESPETEEIVVIGSCMSPAD-----SIFNERDESLRSVLSEIRINLRT 441
Query: 180 GLASQKRLSASA---VDFPRVNECYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPDEEK 236
+++ L + ++ VN GRK R+ + I KV+G K DL E
Sbjct: 442 RKTTRRSLLVNEDVNLEIGMVNRNRLGRKTRFAFLAIAYPWPKVSGFAKVDLCT---GEM 498
Query: 237 TKLEVGGNVRGIFDLGPGRFGSEAVFVPREPGTSSE-EDVGYLIFFSHDEKTGKSSVNVI 295
K GG ++G E F+P G E ED GY+ HDE+T S + +I
Sbjct: 499 KKYIYGGE----------KYGGEPFFLPGNSGNGEENEDDGYIFCHVHDEETKTSELQII 548
Query: 296 DAKTMSADPVAVVELPHRVPYGFHAFFVSEEQLEEQ 331
+A + + A ++LP RVPYGFH FV +L +Q
Sbjct: 549 NAVNLKLE--ATIKLPSRVPYGFHGTFVDSNELVDQ 582
>sp|O06785|CCO_MYCTU Carotenoid cleavage oxygenase OS=Mycobacterium tuberculosis
GN=Rv0654 PE=1 SV=1
Length = 501
Score = 128 bits (322), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 157/367 (42%), Gaps = 64/367 (17%)
Query: 3 DYDKRLQHSFTAHPKVDPYTGEMFTFGYAHTPPY-ITYRVISKDGFMHDPVPITVSDPIM 61
D+D L +TAHP+ DP+TGE+ Y+ + + Y VI DG V I V+ M
Sbjct: 150 DFDGTLHGGYTAHPQRDPHTGELHAVSYSFARGHRVQYSVIGTDGHARRTVDIEVAGSPM 209
Query: 62 MHDFAITENYAIFMDLPLYFRPKEMV---------------------------------- 87
MH F++T+NY + DLP+ F P ++V
Sbjct: 210 MHSFSLTDNYVVIYDLPVTFDPMQVVPASVPRWLQRPARLVIQSVLGRVRIPDPIAALGN 269
Query: 88 ----KENKLIFTFDDTKKARFGILPRYAKNEAQMKWFELPNCFIFHNANAWEE---EDEV 140
++L + ++ + AR G++PR NE ++WF++ C+++H NA+ E EV
Sbjct: 270 RMQGHSDRLPYAWNPSYPARVGVMPREGGNE-DVRWFDIEPCYVYHPLNAYSECRNGAEV 328
Query: 141 VLITC----RLDKPDLDMVNGAVKEKLENFSNELYEMRFNLKTGLASQKRLSASAVDFPR 196
+++ R+ D G + L+ ++ NL TG + + A +FPR
Sbjct: 329 LVLDVVRYSRMFDRDRRGPGGDSRPSLDRWT-------INLATGAVTAECRDDRAQEFPR 381
Query: 197 VNECYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPDEEKTKLEVGGNVRGIFDLGPGRF 256
+NE G R+ Y + G A K + + L P
Sbjct: 382 INETLVGGPHRFAY------TVGIEGGFLVGAGAALSTPLYKQDCVTGSSTVASLDPDLL 435
Query: 257 GSEAVFVPREPGTSSEEDVGYLIFFSHDEKTGKSSVNVIDAKTMSADPVAVVELPHRVPY 316
E VFVP P +E+D G L+ + + + ++DA+T+ + +A V LP RVP
Sbjct: 436 IGEMVFVP-NPSARAEDD-GILMGYGWHRGRDEGQLLLLDAQTLES--IATVHLPQRVPM 491
Query: 317 GFHAFFV 323
GFH +
Sbjct: 492 GFHGNWA 498
>sp|Q53353|LSDX1_PSEPA Lignostilbene-alpha,beta-dioxygenase isozyme I OS=Pseudomonas
paucimobilis PE=1 SV=1
Length = 485
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 154/358 (43%), Gaps = 54/358 (15%)
Query: 3 DYDKRLQ-HSFTAHPKVDPYTGEMFTFGYAHTPPY---ITYRVISKDGFMHDPVPITVSD 58
++D +LQ +F AHPK+DP TG + F Y + Y IS G + +P
Sbjct: 154 NFDGKLQSQTFCAHPKIDPVTGNLCAFAYGAKGLMTLDMAYIEISPTGKLLKEIPFQNPY 213
Query: 59 PIMMHDFAITENYAIFMDLPLYFRPKEMVKENKLIFTFDDTKKARFGILPRYAKNEAQMK 118
MMHDF +TE+YA+F +PL + +++ F FD T GILPR + ++
Sbjct: 214 YCMMHDFGVTEDYAVFAVMPL-LSSWDRLEQRLPFFGFDTTLPCYLGILPRNG-DARDLR 271
Query: 119 WFELPNCFIFHNANAWEEEDEVVL---ITCRLDKPDLDMVNGAVKEKLENFSNELYEMRF 175
WF+ NCF+ H NA+ + +V + ++ P D V+GA + + + + R+
Sbjct: 272 WFKTGNCFVGHVMNAFNDGTKVHIDMPVSRNNSFPFFD-VHGA---PFDPVAGQGFLTRW 327
Query: 176 NLKTG-----LASQKRLSASAVDFPRVNECYTGRKQRYVYGTILDSIAKVTGIIKFDLHA 230
+ +RL +FPR++E Y R R+ + ILD+
Sbjct: 328 TVDMASNGDSFEKTERLFDRPDEFPRIDERYATRAYRHGWMLILDT-------------- 373
Query: 231 EPDEEKTKLEVGG------NVRGIFDLGPGRFGS----------EAVFVPREPGTSSEED 274
EK GG N G DL G+ S E F+PR P + E
Sbjct: 374 ----EKPYEAPGGAFYALTNTLGHIDLATGKSSSWWAGPRCAIQEPCFIPRSP--DAPEG 427
Query: 275 VGYLIFFSHDEKTGKSSVNVIDAKTMSADPVAVVELPHRVPYGFHAFFVSEEQLEEQA 332
GY+I D S + + DA+ + P+A +LP R+ G H + +L A
Sbjct: 428 DGYVIALVDDHVANYSDLAIFDAQHVDQGPIARAKLPVRIRQGLHGNWADASRLAVAA 485
>sp|Q52008|LSDX3_PSEPA Lignostilbene-alpha,beta-dioxygenase isozyme III OS=Pseudomonas
paucimobilis GN=lsdB PE=1 SV=1
Length = 490
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 155/353 (43%), Gaps = 47/353 (13%)
Query: 3 DYDKRLQH-SFTAHPKVDPYTGEMFTFGYAHTPPYIT---YRVISKDGFMHDPVPITVSD 58
++D +L++ +F+AH K+DP TG FGYA T T Y I G + V
Sbjct: 154 NFDGKLKNQTFSAHAKIDPVTGNFCNFGYAATGLLTTDCSYFEIDPAGNLLFETEFQVPY 213
Query: 59 PIMMHDFAITENYAIFMDLPLYFRPK-EMVKENKLIFTFDDTKKARFGILPRY-AKNEAQ 116
MMHD+ +TE+YAIF +P P + +K F FD T G++PR
Sbjct: 214 YCMMHDYGLTEHYAIFHIVPC--SPNWDRLKAGLPHFGFDTTLPVWLGVVPRGPGVTNKD 271
Query: 117 MKWFELP-NCFIFHNANAWEEEDEVVLITCRLDK---PDLDMVNGAVKEKLENFSNELYE 172
++WF+ P F H NA+EE ++ T + + P ++GA + + Y
Sbjct: 272 VRWFKAPKTIFASHVMNAFEEGSKIHFDTPQAENNAFPFFPDIHGA---PFDPVAARPYL 328
Query: 173 MRFNLKTGLASQ-----KRLSASAVDFPRVNECYTGRKQRYVYGTILD------------ 215
R+ + G S+ ++L++ +FPRV+ Y G+ R+ +G ++D
Sbjct: 329 HRWTVDLGSNSEDFAEVRQLTSWIDEFPRVDARYVGQPYRHGWGLVMDPEMEMEFARGRA 388
Query: 216 SIAKVTGIIKFDLHAEPDEEKTKLEVGGNVRGIFDLGPGRFGSEAVFVPREPGTSSEEDV 275
S K+ I +D HA E+ + GP E FVPR S E
Sbjct: 389 SGFKMNRIGHWD-HATGKEDS------------WWCGPQSIIQEPCFVPRM--ADSAEGD 433
Query: 276 GYLIFFSHDEKTGKSSVNVIDAKTMSADPVAVVELPHRVPYGFHAFFVSEEQL 328
GY+I + T S + V+DA + P+ +LP R+ G H + +L
Sbjct: 434 GYIIALVDNLITNYSDLVVLDALNLKDGPIGRAKLPIRLRSGLHGNWADASKL 486
>sp|P74334|ACOX_SYNY3 Apocarotenoid-15,15'-oxygenase OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1541 PE=1 SV=1
Length = 490
Score = 94.7 bits (234), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 147/337 (43%), Gaps = 51/337 (15%)
Query: 12 FTAHPKVDPYTGEMFTFGYAHTPPYITYRV------------ISKDGFMHDPVPITVSDP 59
+AHP++DP + TF P Y+T+ + + G + T
Sbjct: 180 LSAHPRIDPAS----TFDGGQ-PCYVTFSIKSSLSSTLTLLELDPQGKLLRQKTETFPGF 234
Query: 60 IMMHDFAITENYAIFMD-------LPLYFRPKEMVKENKLIFTFDDTKKARFGILPRYAK 112
+HDFAIT +YAIF+ LP F ++ F K A+ ++PR
Sbjct: 235 AFIHDFAITPHYAIFLQNNVTLNGLPYLFG----LRGAGECVQFHPDKPAQIILVPR--- 287
Query: 113 NEAQMKWFELPNCFIFHNANAWEEEDEVVLIT-CRLDKPDLDMVNGAVKEKLENFS-NEL 170
+ ++K + F+FH+ANA+EE +++L + C P +D +N +L
Sbjct: 288 DGGEIKRIPVQAGFVFHHANAFEENGKIILDSICYNSLPQVDTDGDFRSTNFDNLDPGQL 347
Query: 171 YEMRFNLKTGLASQKRLSASAVDFPRVNECYTGRKQRYVY-GTILDSI--AKVTGIIKFD 227
+ + ++ + + +FP V+ GR RYVY G S A + I+K D
Sbjct: 348 WRFTIDPAAATVEKQLMVSRCCEFPVVHPQQVGRPYRYVYMGAAHHSTGNAPLQAILKVD 407
Query: 228 LHAEPDEEKTKLEVGGNVRGIFDLGPGRFGSEAVFVPREPGTSSEEDVGYLIFFSHDEKT 287
L + + ++ P F E +FVPR PG +E+D G+L+ +
Sbjct: 408 LESGTETLRS-------------FAPHGFAGEPIFVPR-PGGVAEDD-GWLLCLIYKADL 452
Query: 288 GKSSVNVIDAKTMSADPVAVVELPHRVPYGFHAFFVS 324
+S + ++DA+ ++A +A ++L H +PY H +
Sbjct: 453 HRSELVILDAQDITAPAIATLKLKHHIPYPLHGSWAQ 489
>sp|Q99NF1|BCDO2_MOUSE Beta,beta-carotene 9',10'-oxygenase OS=Mus musculus GN=Bco2 PE=1
SV=1
Length = 532
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 151/380 (39%), Gaps = 95/380 (25%)
Query: 13 TAHPKVDPYTGEMFTFGYAHTPPYITYRVISKDGFMHDP--------VPITVSD-----P 59
TAHP DP G + G ++ P Y +I +P V +++ P
Sbjct: 177 TAHPHYDP-DGTAYNMGNSYGPRGSCYNIIRVPPKKKEPGETIHGAQVLCSIASTEKMKP 235
Query: 60 IMMHDFAITENYAIFMDLPLYFRPKEMVKENKLIFTFDD------TKKARFGILPRYAKN 113
H F +T+NY IF++ P+ + +++ F D RF ++ ++
Sbjct: 236 SYYHSFGMTKNYIIFVEQPVKMKLWKIITSKIRGKPFADGISWEPQYNTRFHVVDKHTGQ 295
Query: 114 EAQMKWFELPNCFIFHNANAWEEEDEVVL-ITCRLDKPDLDMVNGAVKEKLENFSNELYE 172
++ +P +H NA+E++ +V+ + C+ D LD+ K +++YE
Sbjct: 296 LLPGMYYSMP-FLTYHQINAFEDQGCIVIDLCCQDDGRSLDLYQLQNLRKAGEGLDQVYE 354
Query: 173 MR-----------FNLKTGLASQKRL------SASAV----------------------- 192
++ ++ A K L SASAV
Sbjct: 355 LKAKSFPRRFVLPLDVSVDAAEGKNLSPLSYSSASAVKQGDGEIWCSPENLHHEDLEEEG 414
Query: 193 --DFPRVNEC-YTGRKQRYVYGT-----ILDSIAKVTGIIKFDLHAEPDEEKTKLEVGGN 244
+FP++N + G+K + YG + DS+ KV + L +E
Sbjct: 415 GIEFPQINYGRFNGKKYSFFYGCGFRHLVGDSLIKVD-VTNKTLRVWREE---------- 463
Query: 245 VRGIFDLGPGRFGSEAVFVPREPGTSSEEDVGYLIFFSHDEKTGKSS-VNVIDAKTMSAD 303
G + SE VFVP PG + EED G ++ +S+ + V+DAK+ +
Sbjct: 464 ---------GFYPSEPVFVPV-PG-ADEEDSGVILSVVITPNQSESNFLLVLDAKSFTE- 511
Query: 304 PVAVVELPHRVPYGFHAFFV 323
+ E+P ++PYGFH FV
Sbjct: 512 -LGRAEVPVQMPYGFHGTFV 530
>sp|Q8VY26|CCD8_ARATH Carotenoid cleavage dioxygenase 8, chloroplastic OS=Arabidopsis
thaliana GN=CCD8 PE=1 SV=1
Length = 570
Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 123/291 (42%), Gaps = 44/291 (15%)
Query: 59 PIMMHDFAITENYAIFMDLPLYFRPKEMVK-ENKLIFTFDDTKKARFGILPRYAKNEAQM 117
P +H FA+TENY + ++PL + K +++ E ++ F+ + I +
Sbjct: 301 PGWVHSFAVTENYVVIPEMPLRYSVKNLLRAEPTPLYKFEWCPQDGAFIHVMSKLTGEVV 360
Query: 118 KWFELPNCFIFHNANAWEEEDE------VVLITCR--------LDKPDLDMVNGAVKE-- 161
E+P FH NA+EE+ V++ C LD LD + +
Sbjct: 361 ASVEVPAYVTFHFINAYEEDKNGDGKATVIIADCCEHNADTRILDMLRLDTLRSSHGHDV 420
Query: 162 ----KLENFSNELYEMRFN-LKTGLASQKRLSASAVDFPRVNECYTGRKQRYVYGTILDS 216
++ F L ++ L+T + ++K A+D +N Y G+K RYVY
Sbjct: 421 LPDARIGRFRIPLDGSKYGKLETAVEAEKH--GRAMDMCSINPLYLGQKYRYVYACGAQR 478
Query: 217 IAKV-TGIIKFDLHAEPDEEKTKLEVGGNVRGIFDLGPGRFGSEAVFVPREPGTSSEEDV 275
+ K D+ V V+ + G SE FVPR PG + E+D
Sbjct: 479 PCNFPNALSKVDI------------VEKKVKNWHE--HGMIPSEPFFVPR-PGATHEDD- 522
Query: 276 GYLIFFSHDEKTGKSSVNVIDAKTMSADPVAVVELPHRVPYGFHAFFVSEE 326
G +I +E G ++ ++D S + +A + P+ +PYG H ++ ++
Sbjct: 523 GVVISIVSEENGGSFAI-LLDGS--SFEEIARAKFPYGLPYGLHGCWIPKD 570
>sp|Q8HXG8|BCDO2_MACFA Beta,beta-carotene 9',10'-oxygenase OS=Macaca fascicularis GN=BCO2
PE=2 SV=2
Length = 556
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 148/381 (38%), Gaps = 97/381 (25%)
Query: 13 TAHPKVDPYTGEMFTFGYAHTPPYITYRVI-----------SKDG--FMHDPVPITVSDP 59
TAHP DP G + G + P +Y+VI + G + P P
Sbjct: 201 TAHPHYDP-DGTAYNMGNSFGPFGFSYKVIRVPPEKVDLEETTHGAQVICSIAPTEKGKP 259
Query: 60 IMMHDFAITENYAIFMDLPLYFRPKEMVKENKLIFTFDD------TKKARFGILPRYAKN 113
H F +T NY IF++ PL ++ F D RF ++ ++
Sbjct: 260 SYYHSFGMTRNYIIFIEQPLKMNLWKIATSKIRGKAFSDGISWEPQCNTRFHVVDKHTGQ 319
Query: 114 EAQMKWFELPNCFI-FHNANAWEEEDEVVLITCRLDKPDLDMV--------NGAVKEKLE 164
+++ P F+ FH+ NA+E++ V++ C D + V G +++
Sbjct: 320 LLPGRYYSKP--FVAFHHINAFEDQGCVIIDLCCQDNGRILEVYQLQNLRKAGEELDQVY 377
Query: 165 NFSNELYEMRFNLKT----------GLASQKRLSASAV---------------------- 192
N + + RF L L+ SASAV
Sbjct: 378 NSAGRSFPRRFVLPLNVSLNAPEGDNLSPLSYTSASAVKQADGTIWCSHENLHQEDLEKE 437
Query: 193 ---DFPRVNEC-YTGRKQRYVYGT-----ILDSIAKVTGIIKFDLHAEPDEEKTKLEVGG 243
+FP++ ++G+K R+ YG + DS+ KV ++ L ++
Sbjct: 438 GGIEFPQIYYGQFSGKKYRFFYGCGFRHLVGDSLIKVD-VVNKTLKVWRED--------- 487
Query: 244 NVRGIFDLGPGRFGSEAVFVPREPGTSSEEDVGYLIFFSHDEKTGKSS-VNVIDAKTMSA 302
G + SE VFVP PGT +EED G ++ +S+ + V+DAK
Sbjct: 488 ----------GFYPSEPVFVP-VPGT-NEEDGGVILSVVITPNQNESNFLLVLDAKNF-- 533
Query: 303 DPVAVVELPHRVPYGFHAFFV 323
+ + E+P ++PYGFH F+
Sbjct: 534 EELGRAEVPVQMPYGFHGTFI 554
>sp|Q9I993|BCDO1_CHICK Beta,beta-carotene 15,15'-monooxygenase OS=Gallus gallus GN=BCMO1
PE=1 SV=1
Length = 526
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 139/387 (35%), Gaps = 83/387 (21%)
Query: 2 LDYDKRLQHSF-TAHPKVDPYTGEMFTFGYAHT----PPYITYRVIS--------KDGFM 48
+DY K + + T+HP D G + G + Y+ +++ S K F
Sbjct: 158 VDYSKYVAVNLATSHPHYDS-AGNILNMGTSIVDKGRTKYVLFKIPSSVPEKEKKKSCFK 216
Query: 49 HDPVPITVSD-----PIMMHDFAITENYAIFMDLPL----------YFRPKEMVKENKLI 93
H V ++ P H F ITENY +F++ P Y R
Sbjct: 217 HLEVVCSIPSRSLLQPSYYHSFGITENYIVFIEQPFKLDIVKLATAYIRGVNWAS----C 272
Query: 94 FTFDDTKKARFGILPRYAKNEAQMKWFELPNCFIFHNANAWEEEDEVVL-ITCRLDKPDL 152
+F K F + R K E K F ++H+ NA+EE+ VV I D
Sbjct: 273 LSFHKEDKTWFHFVDRKTKKEVSTK-FYTDALVLYHHINAYEEDGHVVFDIVAYRDNSLY 331
Query: 153 DMVNGAVKEKLENFSNELYEM----RF--------------NL------------KTG-L 181
DM +K +N+L + RF NL K G +
Sbjct: 332 DMFYLKKLDKDFEVNNKLTSIPTCKRFVVPLQYDKDAEVGSNLVKLPTSATAVKEKDGSI 391
Query: 182 ASQKRLSASAVDFPRVNECYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPDEEKTKLEV 241
Q + ++ PRVN Y G+K +YVY T + T I K ++ + K L
Sbjct: 392 YCQPEILCEGIELPRVNYDYNGKKYKYVYATEVQWSPVPTKIAKLNV-----QTKEVLHW 446
Query: 242 GGNVRGIFDLGPGRFGSEAVFVPREPGTSSEEDVGYLIFFSHDEKTGKSSVNVIDAKTMS 301
G + + SE +FVP P E++ L E + ++DAKT
Sbjct: 447 GED---------HCWPSEPIFVP-SPDAREEDEGVVLTCVVVSEPNKAPFLLILDAKTFK 496
Query: 302 ADPVAVVELPHRVPYGFHAFFVSEEQL 328
A V + + H F+ + L
Sbjct: 497 ELGRATVNVEMHL--DLHGMFIPQNDL 521
>sp|Q5RF16|BCDO2_PONAB Beta,beta-carotene 9',10'-oxygenase OS=Pongo abelii GN=BCO2 PE=2
SV=1
Length = 557
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 142/377 (37%), Gaps = 88/377 (23%)
Query: 13 TAHPKVDPYTGEMFTFGYAHTPPYITYRVIS--------KDGFMHDPVPITVSD-----P 59
TAHP DP G + G + P +Y+VI + V +++ P
Sbjct: 201 TAHPHYDP-DGTAYNMGNSFGPYGFSYKVIRVPPEKVDLGETIHGAQVICSIASTEKGKP 259
Query: 60 IMMHDFAITENYAIFMDLPLYFRPKEMVKENKLIFTFDD------TKKARFGILPRYAKN 113
H F +T NY IF++ PL ++ F D F ++ +
Sbjct: 260 SYYHSFGMTRNYIIFIEQPLKMNLWKIATSKIRGKAFSDGISWEPQCNTWFHVVDKRTGQ 319
Query: 114 EAQMKWFELPNCFI-FHNANAWEEEDEVVLITCRLDK----------------PDLDMV- 155
+++ P F+ FH NA+E++ V++ C D LD V
Sbjct: 320 LLPGRYYSKP--FVTFHQINAFEDQGCVIIDLCCQDNGRTLEVYQLQNLRKAGEGLDQVY 377
Query: 156 NGAVKEKLENFSNELYEMRFNLKTG--LASQKRLSASAV--------------------- 192
N A K F L + N G L+ SASAV
Sbjct: 378 NSAAKSFPRRFVLPL-NVSLNAPEGDNLSPLSYTSASAVKQADGTIWCSHENLHQEDLEK 436
Query: 193 ----DFPRVN-ECYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPDEEKTKLEVGGNVRG 247
+FP++ + ++G+K + YG + +IK D+ L+V
Sbjct: 437 EGGIEFPQIYYDQFSGKKYHFFYGCGFRHLVGGDSLIKVDV------VNKTLKVWRE--- 487
Query: 248 IFDLGPGRFGSEAVFVPREPGTSSEEDVGYLIFFSHDEKTGKSS-VNVIDAKTMSADPVA 306
G + SE VFVP PGT+ EED G ++ +S+ + V+DAK +
Sbjct: 488 -----DGFYPSEPVFVP-APGTN-EEDGGVILSVVITPNQNESNFLLVLDAKNFGE--LG 538
Query: 307 VVELPHRVPYGFHAFFV 323
E+P ++PYGFH F+
Sbjct: 539 RAEVPVQMPYGFHGTFI 555
>sp|Q9BYV7|BCDO2_HUMAN Beta,beta-carotene 9',10'-oxygenase OS=Homo sapiens GN=BCO2 PE=1
SV=5
Length = 579
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 149/381 (39%), Gaps = 97/381 (25%)
Query: 13 TAHPKVDPYTGEMFTFGYAHTPPYITYRVISKD------GFMHDPVPITVS-------DP 59
TAHP D G + G + P +Y+VI G V + S P
Sbjct: 224 TAHPHYD-LDGTAYNMGNSFGPYGFSYKVIRVPPEKVDLGETIHGVQVICSIASTEKGKP 282
Query: 60 IMMHDFAITENYAIFMDLPLYFRPKEMVKENKLIFTFDD------TKKARFGILPRYAKN 113
H F +T NY IF++ PL ++ F D RF ++ +
Sbjct: 283 SYYHSFGMTRNYIIFIEQPLKMNLWKIATSKIRGKAFSDGISWEPQCNTRFHVVEKRTGQ 342
Query: 114 EAQMKWFELPNCFI-FHNANAWEEEDEVVL-ITCRLDKPDLDMVN-------GAVKEKLE 164
+++ P F+ FH NA+E++ V++ + C+ + L++ G +++
Sbjct: 343 LLPGRYYSKP--FVTFHQINAFEDQGCVIIDLCCQDNGRTLEVYQLQNLRKAGEGLDQVH 400
Query: 165 NFSNELYEMRFNLKTG----------LASQKRLSASAV---------------------- 192
N + + + RF L L+ SASAV
Sbjct: 401 NSAAKSFPRRFVLPLNVSLNAPEGDNLSPLSYTSASAVKQADGTIWCSHENLHQEDLEKE 460
Query: 193 ---DFPRVN-ECYTGRKQRYVYGT-----ILDSIAKVTGIIKFDLHAEPDEEKTKLEVGG 243
+FP++ + ++G+K + YG + DS+ KV ++ L ++
Sbjct: 461 GGIEFPQIYYDRFSGKKYHFFYGCGFRHLVGDSLIKVD-VVNKTLKVWRED--------- 510
Query: 244 NVRGIFDLGPGRFGSEAVFVPREPGTSSEEDVGYLIFFSHDEKTGKSS-VNVIDAKTMSA 302
G + SE VFVP PGT+ EED G ++ +S+ + V+DAK
Sbjct: 511 ----------GFYPSEPVFVP-APGTN-EEDGGVILSVVITPNQNESNFILVLDAKNF-- 556
Query: 303 DPVAVVELPHRVPYGFHAFFV 323
+ + E+P ++PYGFH F+
Sbjct: 557 EELGRAEVPVQMPYGFHGTFI 577
>sp|Q9HAY6|BCDO1_HUMAN Beta,beta-carotene 15,15'-monooxygenase OS=Homo sapiens GN=BCMO1
PE=1 SV=1
Length = 547
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 117/306 (38%), Gaps = 57/306 (18%)
Query: 59 PIMMHDFAITENYAIFMDLPLYFRPKEMVK------ENKLIFTFDDTKKARFGILPRYAK 112
P H F +TENY IF++ P +M F +K I+ + +
Sbjct: 233 PSYYHSFGVTENYVIFLEQPFRLDILKMATAYIRRMSWASCLAFHREEKTYIHIIDQRTR 292
Query: 113 NEAQMKWFELPNCFIFHNANAWEEEDEVVLITCRLDKPDLDM------VNGAVKEK---- 162
Q K F +FH+ NA+EE+ +V + L +N KE
Sbjct: 293 QPVQTK-FYTDAMVVFHHVNAYEEDGCIVFDVIAYEDNSLYQLFYLANLNQDFKENSRLT 351
Query: 163 ----LENFSNELY-EMRFNLKTGLASQKRLSASA------------------VDFPRVNE 199
L F+ L+ + + T L +A+A ++ PRVN
Sbjct: 352 SVPTLRRFAVPLHVDKNAEVGTNLIKVASTTATALKEEDGQVYCQPEFLYEGLELPRVNY 411
Query: 200 CYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPDEEKTKLEVGGNVRGIFDLGPGRFGSE 259
+ G++ RYV+ T + T IIK+D+ K+ L+ + D P +E
Sbjct: 412 AHNGKQYRYVFATGVQWSPIPTKIIKYDILT-----KSSLKWRED-----DCWP----AE 457
Query: 260 AVFVPREPGTSSEEDVGYLIFFSHDEKTGKSSVNVIDAKTMSADPVAVVELPHRVPYGFH 319
+FVP PG E+D L + + ++DAK+ + A V++ + H
Sbjct: 458 PLFVP-APGAKDEDDGVILSAIVSTDPQKLPFLLILDAKSFTELARASVDVDMHM--DLH 514
Query: 320 AFFVSE 325
F+++
Sbjct: 515 GLFITD 520
>sp|Q7XJM2|CCD7_ARATH Carotenoid cleavage dioxygenase 7, chloroplastic OS=Arabidopsis
thaliana GN=CCD7 PE=1 SV=1
Length = 618
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 67/138 (48%), Gaps = 12/138 (8%)
Query: 193 DFPRVNECYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPDEEKTKLEVGGNVRGIFDLG 252
DFP +N ++G+K +Y+Y + + + +L P + K ++ N+ + G
Sbjct: 488 DFPVINSSWSGKKNKYMY-------SAASSGTRSELPHFPFDMVVKFDLDSNLVRTWSTG 540
Query: 253 PGRFGSEAVFVPREP-GTSSEEDVGYLIFFSHDEKTGKSSVNVIDAKTM--SADPVAVVE 309
RF E +FVP+ EED GY++ + + + ++DAK + S V+ +E
Sbjct: 541 ARRFVGEPMFVPKNSVEEGEEEDDGYIVVVEYAVSVERCYLVILDAKKIGESDAVVSRLE 600
Query: 310 LPHRV--PYGFHAFFVSE 325
+P + P GFH + S+
Sbjct: 601 VPRNLTFPMGFHGLWASD 618
>sp|Q9JJS6|BCDO1_MOUSE Beta,beta-carotene 15,15'-monooxygenase OS=Mus musculus GN=Bcmo1
PE=1 SV=2
Length = 566
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 81/209 (38%), Gaps = 40/209 (19%)
Query: 59 PIMMHDFAITENYAIFMDLPLYFRPKEMVK------ENKLIFTFDDTKKARFGILPRYAK 112
P H F +TENY +F++ P +M +FD K I+ + +
Sbjct: 233 PSYYHSFGVTENYVVFLEQPFKLDILKMATAYMRGVSWASCMSFDREDKTYIHIIDQRTR 292
Query: 113 NEAQMKWFELPNCFIFHNANAWEEEDEVVLITCRLDKPDLDM------VNGAVKEK---- 162
K++ P +FH+ NA+EE+ V+ + L +N +EK
Sbjct: 293 KPVPTKFYTDP-MVVFHHVNAYEEDGCVLFDVIAYEDSSLYQLFYLANLNKDFEEKSRLT 351
Query: 163 ----LENFSNELY-----EMRFNL-------------KTG-LASQKRLSASAVDFPRVNE 199
L F+ L+ E+ NL K G + Q + ++ PR+N
Sbjct: 352 SVPTLRRFAVPLHVDKDAEVGSNLVKVSSTTATALKEKDGHVYCQPEVLYEGLELPRINY 411
Query: 200 CYTGRKQRYVYGTILDSIAKVTGIIKFDL 228
Y G+ RY++ + T I+K+D+
Sbjct: 412 AYNGKPYRYIFAAEVQWSPVPTKILKYDI 440
>sp|Q91XT5|BCDO1_RAT Beta,beta-carotene 15,15'-monooxygenase OS=Rattus norvegicus
GN=Bcmo1 PE=2 SV=1
Length = 566
Score = 38.5 bits (88), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 113/304 (37%), Gaps = 57/304 (18%)
Query: 59 PIMMHDFAITENYAIFMDLPLYFRPKEMVK------ENKLIFTFDDTKKARFGILPRYAK 112
P H F +TENY +F++ P +M TF K I+ + +
Sbjct: 233 PSYYHSFGVTENYVVFLEQPFKLDILKMATAYMRGVSWASCMTFCKEDKTYIHIIDQKTR 292
Query: 113 NEAQMKWFELPNCFIFHNANAWEEEDEVVLITCRLDKPDLDM------VNGAVKEK---- 162
K++ P +FH+ NA+EE+ V+ + L +N +EK
Sbjct: 293 KPVPTKFYTDP-MVVFHHVNAYEEDGCVLFDVIAYEDNSLYQLFYLANLNKDFEEKSRLT 351
Query: 163 ----LENFSNELY-----EMRFNL-------KTGLA-------SQKRLSASAVDFPRVNE 199
L F+ L+ E+ NL T L Q + ++ PR+N
Sbjct: 352 SVPTLRRFAVPLHVDKDAEVGSNLVKVSSTTATALKEKDDHVYCQPEVLYEGLELPRINY 411
Query: 200 CYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPDEEKTKLEVGGNVRGIFDLGPGRFGSE 259
+ G+ RY++ + T I+K+D+ + + ++ + +E
Sbjct: 412 AHNGKPYRYIFAAEVQWSPVPTKILKYDVLTKSSLKWSEESC--------------WPAE 457
Query: 260 AVFVPREPGTSSEEDVGYLIFFSHDEKTGKSSVNVIDAKTMSADPVAVVELPHRVPYGFH 319
+FVP PG E+D L + + ++DAK+ + A V++ + H
Sbjct: 458 PLFVPT-PGAKDEDDGVILSAIISTDPQKLPFLLILDAKSFTELARASVDVDMHL--DLH 514
Query: 320 AFFV 323
F+
Sbjct: 515 GLFI 518
>sp|Q74ZH9|GDE1_ASHGO Glycerophosphodiester phosphodiesterase GDE1 OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=GDE1 PE=3 SV=2
Length = 1321
Score = 35.4 bits (80), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Query: 2 LDYDKRLQHSFTAHPKVDPYTGEMFTFGYAHT--PPYITYRVISKDGFMHDPVPITVSDP 59
++YD+RL+ ++ D + + GY H P YI Y +DG VP +D
Sbjct: 97 MEYDRRLRKLLSSAQLADITSVQRGATGYLHAPLPQYIAYGERERDGLPERYVPPHATD- 155
Query: 60 IMMHDFAITENYAIFMDLPLYFRPKEMVKE-NKLIFT 95
M D A E I ++L +FR + E NK FT
Sbjct: 156 -MSEDLA--EVLTILLELRSHFRNLKWYGELNKRAFT 189
>sp|P77374|YNFE_ECOLI Putative dimethyl sulfoxide reductase chain YnfE OS=Escherichia
coli (strain K12) GN=ynfE PE=3 SV=1
Length = 808
Score = 33.1 bits (74), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Query: 152 LDMVNGAVKEKLENFSNELYEMRFNLKTGLASQKRLSASAVDFPRVNECYTGRKQRY-VY 210
LD + ++K+ +E + NE ++++ + R S SA R+ CY G +Y Y
Sbjct: 136 LDTIASSLKKTVEQYGNEAVYIQYSSGIVGGNMTRSSPSASAVKRLMNCYGGSLNQYGSY 195
Query: 211 GTILDSIAKVTGIIKFDLHAEPDEEKTKLEV 241
T S A D ++ D E +KL V
Sbjct: 196 STAQISCAMPYTYGSNDGNSTTDIENSKLVV 226
>sp|Q9VZE6|BRX1_DROME Ribosome biogenesis protein BRX1 homolog OS=Drosophila melanogaster
GN=CG11583 PE=2 SV=2
Length = 359
Score = 32.7 bits (73), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 15 HPKVDPYTGEMFTFGYAHTPPYI-TYRVISKDGFMHDPVPITVSDPIMMHDFAIT 68
HPK P+ +FTF Y + ++++S+DG + + P V +P+ + D + T
Sbjct: 187 HPKSQPFVDHVFTFTYLDKRIWFRNFQILSEDGGLSEVGPRYVMNPVKIFDGSFT 241
>sp|B3E7U3|RL29_GEOLS 50S ribosomal protein L29 OS=Geobacter lovleyi (strain ATCC
BAA-1151 / DSM 17278 / SZ) GN=rpmC PE=3 SV=1
Length = 62
Score = 32.0 bits (71), Expect = 6.5, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 154 MVNGAVKEKLENFSNELYEMRFNLKTG-LASQKRLSASAVDFPRVNECYT 202
M +K+K + + EL+ ++F L TG L + +L A D R+N T
Sbjct: 9 MAEAELKQKRDELTQELFNLKFQLNTGRLENTGKLGAIRKDIARINTILT 58
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 132,309,792
Number of Sequences: 539616
Number of extensions: 5752702
Number of successful extensions: 11819
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 11698
Number of HSP's gapped (non-prelim): 56
length of query: 334
length of database: 191,569,459
effective HSP length: 118
effective length of query: 216
effective length of database: 127,894,771
effective search space: 27625270536
effective search space used: 27625270536
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)