Your job contains 1 sequence.
>019902
MGSKADQESFLWVPEYDEPLSPQLTNLKRRGRSKKVKFDGWGSIPLIEFLQSLGKDTTQQ
ISRYDVTDIINKYVNENKLVHSVKKKRVVSDERLLSLFGKKSFLRIKIYDLLEAHYAENQ
FESDDDFLFSSDEENNLFSSEKQKSRKVPLKKLCLETPKSCWAAIVPDNIKLVYLKRSLV
QDLLKDSETFECKVVGSFVRVKSDPNDYLQKNSHQLLQVIGTKKVPGTDDKSTEILLKVS
NFVKDIRIATLSDDNFSEEECEDLRQRVKDGLLKRPTVVELQEKTQILHEDITKHWLVRE
LALLQKLIDRANVKGMAQRISSITSVQCGRMLKT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019902
(334 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2150828 - symbol:AT5G08430 species:3702 "Arabi... 797 2.6e-79 1
TAIR|locus:2154473 - symbol:AT5G23480 species:3702 "Arabi... 484 3.8e-46 1
TAIR|locus:2080863 - symbol:AT3G51120 species:3702 "Arabi... 305 9.3e-26 1
TAIR|locus:2827287 - symbol:NERD "Needed for RDR2-indepen... 275 2.2e-22 1
TAIR|locus:2060949 - symbol:AT2G18090 "AT2G18090" species... 120 0.00044 1
>TAIR|locus:2150828 [details] [associations]
symbol:AT5G08430 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IEA] [GO:0016570 "histone modification"
evidence=IEA] [GO:0000394 "RNA splicing, via endonucleolytic
cleavage and ligation" evidence=RCA] [GO:0009086 "methionine
biosynthetic process" evidence=RCA] [GO:0009616 "virus induced gene
silencing" evidence=RCA] [GO:0010050 "vegetative phase change"
evidence=RCA] [GO:0048573 "photoperiodism, flowering" evidence=RCA]
InterPro:IPR003121 InterPro:IPR003169 InterPro:IPR004343
InterPro:IPR018144 Pfam:PF02201 Pfam:PF02213 Pfam:PF03126
PROSITE:PS50829 PROSITE:PS51360 SMART:SM00719 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0006352
GO:GO:0016570 SUPFAM:SSF55277 SUPFAM:SSF47592 EMBL:AL392174
EMBL:AY069913 IPI:IPI00535131 RefSeq:NP_196460.2 UniGene:At.44146
PDB:1V32 PDB:1WH2 PDBsum:1V32 PDBsum:1WH2 ProteinModelPortal:Q9FT92
SMR:Q9FT92 EnsemblPlants:AT5G08430.1 GeneID:830742
KEGG:ath:AT5G08430 TAIR:At5g08430 eggNOG:NOG292743
HOGENOM:HOG000065925 InParanoid:Q9FT92 OMA:DITWVEE PhylomeDB:Q9FT92
ProtClustDB:CLSN2690894 EvolutionaryTrace:Q9FT92
Genevestigator:Q9FT92 GermOnline:AT5G08430 Uniprot:Q9FT92
Length = 553
Score = 797 (285.6 bits), Expect = 2.6e-79, P = 2.6e-79
Identities = 167/312 (53%), Positives = 224/312 (71%)
Query: 12 WVPEYDEPLSPQLTNLKRRGRSKKVKFDGWGSIPLIEFLQSLGKDTTQQISRYDVTDIIN 71
WV E + + ++ KR+ R K+ +F GWGS LIEFL SLGKDT++ ISRYDV+D I
Sbjct: 6 WVEEGNGSAT---SSRKRKARPKRFEFVGWGSRQLIEFLHSLGKDTSEMISRYDVSDTIA 62
Query: 72 KYVNENKLVHSVKKKRVVSDERLLSLFGKKSFLRIKIYDLLEAHYAENQXXXXXXXXXXX 131
KY+++ L+ KK+VV D+RL+ LFG ++ R+K+YDLLE HY ENQ
Sbjct: 63 KYISKEGLLDPSNKKKVVCDKRLVLLFGTRTIFRMKVYDLLEKHYKENQDDSDFDFLYED 122
Query: 132 XXXNNLFSSEK--QKSRKVPLKKLCLETPKSCWAAIVPDNIKLVYLKRSLVQDLLKDSET 189
+ SEK +++ KV +KK P+ +AAIV DNIKL+YL++SLVQ+LLK +T
Sbjct: 123 EP-QIICHSEKIAKRTSKV-VKK-----PRGTFAAIVSDNIKLLYLRKSLVQELLKSPDT 175
Query: 190 FECKVVGSFVRVKSDPNDYLQKNSHQLLQVIGTKKVPGTDDKSTEILLKVSNFVKDIRIA 249
FE K++GSFVR+KSDPNDYLQK +QL+QV G KK GTDD LL+V+N+VKD+ I+
Sbjct: 176 FEGKMLGSFVRIKSDPNDYLQKYPYQLVQVTGVKKEHGTDD----FLLQVTNYVKDVSIS 231
Query: 250 TLSDDNFSEEECEDLRQRVKDGLLKRPTVVELQEKTQILHEDITKHWLVRELALLQKLID 309
LSDDNFS+EECEDL QR+K+GLLK+PT+VE++EK + LH+D TKHWL RE+ LL++LID
Sbjct: 232 VLSDDNFSQEECEDLHQRIKNGLLKKPTIVEMEEKAKKLHKDQTKHWLGREIELLKRLID 291
Query: 310 RANVKGMAQRIS 321
RAN KG + +S
Sbjct: 292 RANEKGWRRELS 303
>TAIR|locus:2154473 [details] [associations]
symbol:AT5G23480 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IEA] [GO:0016570 "histone modification"
evidence=IEA] InterPro:IPR003121 InterPro:IPR003169
InterPro:IPR004343 Pfam:PF02201 Pfam:PF02213 Pfam:PF03126
PROSITE:PS50829 PROSITE:PS51360 GO:GO:0005634 EMBL:CP002688
GO:GO:0003677 GO:GO:0006352 GO:GO:0016570 SUPFAM:SSF55277
SUPFAM:SSF47592 IPI:IPI00544952 RefSeq:NP_568434.4 UniGene:At.31007
EnsemblPlants:AT5G23480.1 GeneID:832414 KEGG:ath:AT5G23480
OMA:EAHQSDE ArrayExpress:F4KCX4 Uniprot:F4KCX4
Length = 570
Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
Identities = 122/294 (41%), Positives = 175/294 (59%)
Query: 28 KRRGRSKKVKFDGWGSIPLIEFLQSLGKDTTQQISRYDVTDIINKYVNENKLVHSVK-KK 86
KR + K ++F GWGS LIEFL+SLG+DTT +IS DVT II Y+ E +K KK
Sbjct: 14 KRLRKPKSLEFVGWGSRNLIEFLESLGRDTTNKISENDVTAIIMNYIREKSRETPLKSKK 73
Query: 87 R---VVSDERLLSLFGKKSFLRIKIYDLLEAHYAENQXXXXXXXXXXXXXXNNLFSSEKQ 143
R V DE+L LFG IK+ DL+E HY ENQ ++L++SE
Sbjct: 74 RRKTVACDEKLRLLFGAGKINVIKVPDLVEKHYVENQEEDLFY--------DDLYASEDD 125
Query: 144 KSRKVPLK-KLCLET------PKSCWAAIVPDNIKLVYLKRSLVQDLLKDSETFECKVVG 196
K +++ L K+ +T P+ +AAIV D +KL+YL++SLVQ+L K ETFE KVV
Sbjct: 126 KQQRLSLSDKVAKQTKQVVSKPRGTFAAIVRDTVKLLYLRKSLVQELAKTPETFESKVVR 185
Query: 197 SFVRVKSDPNDYLQKNSHQLLQVIGTKKVPGTDDKSTEILLKVSNFVKDIRIATLSDDNF 256
+FVR+K N QL+ V G K+ D ++ S ++KD+ ++LSDD+F
Sbjct: 186 TFVRIK---------NPCQLVHVTGVKEGDPIDGNLFQVT-NYSYYLKDVTTSSLSDDDF 235
Query: 257 SEEECEDLRQRVKDGLLKRPTVVELQEKTQILHED-ITKHWLVRELALLQKLID 309
S+EECE+L QR+ +G KR TVV+++EK + LHED + K L++ ++L+D
Sbjct: 236 SQEECEELHQRINNGFAKRLTVVDMEEKARSLHEDYLEKRELLQNPDEQKRLVD 289
>TAIR|locus:2080863 [details] [associations]
symbol:AT3G51120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016570 "histone
modification" evidence=IEA] [GO:0007346 "regulation of mitotic cell
cycle" evidence=RCA] InterPro:IPR000571 InterPro:IPR001965
InterPro:IPR003121 InterPro:IPR003169 InterPro:IPR004343
InterPro:IPR018144 InterPro:IPR019787 Pfam:PF00642 Pfam:PF02201
Pfam:PF02213 Pfam:PF03126 PROSITE:PS50016 PROSITE:PS50103
PROSITE:PS50829 PROSITE:PS51360 SMART:SM00249 SMART:SM00719
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006352 GO:GO:0016570
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 eggNOG:NOG12793 InterPro:IPR019786 PROSITE:PS01359
SUPFAM:SSF55277 SUPFAM:SSF47592 EMBL:AL132980 IPI:IPI00542687
PIR:T45743 RefSeq:NP_190681.6 UniGene:At.858 HSSP:O43918
ProteinModelPortal:Q9SD34 SMR:Q9SD34 PaxDb:Q9SD34 PRIDE:Q9SD34
EnsemblPlants:AT3G51120.1 GeneID:824276 KEGG:ath:AT3G51120
TAIR:At3g51120 HOGENOM:HOG000177620 InParanoid:Q9SD34 OMA:ESEIWHY
Genevestigator:Q9SD34 Uniprot:Q9SD34
Length = 1292
Score = 305 (112.4 bits), Expect = 9.3e-26, P = 9.3e-26
Identities = 98/315 (31%), Positives = 158/315 (50%)
Query: 21 SPQLTNLKRRGRS-----KKVKFD-GWGSIPLIEFLQSLGKDTTQQISRYDVTDIINKYV 74
SP L N K G++ KK D W + L+EF+ + T +S++DV ++ Y+
Sbjct: 294 SPTLPN-KLDGKNPSNILKKAPGDTSWATKELLEFVSFMKNGDTSVLSQFDVQGLLLDYI 352
Query: 75 NENKLVHSVKKKRVVSDERLLSLFGKKSFLRIKIYDLLEAHYAENQXXXXXXXXXXXXXX 134
+ L ++K +V+ D+ L+ LFGK+ ++ LLE+H Q
Sbjct: 353 KKKNLRDPLQKSQVLCDQMLVKLFGKQRVGHFEMLKLLESHVLI-QEKPKGAKTTNGETT 411
Query: 135 NNLFSSEKQKSRKVPL-----KKLCLETPK-------SCWAAIVPDNIKLVYLKRSLVQD 182
+ + S ++ S P+ +K+ +T +AAI NI L+YL+R ++
Sbjct: 412 HAVPSQIEEDSVHDPMVRDRRRKMRRKTDGRVQNENLDAYAAIDVHNINLIYLRRKFLES 471
Query: 183 LLKDSETFECKVVGSFVRVKSDPNDYLQK-NSHQLLQVIGTKKVPGTDD---KSTEILLK 238
LL D + KVVG+ +R+K +D QK + H+L+QV+GT K + K+T+++L+
Sbjct: 472 LLDDINKVDEKVVGTILRIKVSGSD--QKLDIHRLVQVVGTSKAIASYQLGAKTTDVMLE 529
Query: 239 VSNFVKD--IRIATLSDDNFSEEECEDLRQRVKDGLLKRPTVVELQEKTQILHEDITKHW 296
+ N K I I LSD N +E+EC+ LRQ +K GL KR TVV++ + L
Sbjct: 530 ILNLDKREVISIDQLSDQNITEDECKRLRQSIKCGLNKRLTVVDILKTAATLQAMRINEA 589
Query: 297 LVRELALLQKLIDRA 311
L E+ L L DRA
Sbjct: 590 LEAEILKLNHLRDRA 604
>TAIR|locus:2827287 [details] [associations]
symbol:NERD "Needed for RDR2-independent DNA methylation"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0031048
"chromatin silencing by small RNA" evidence=IMP] [GO:0042393
"histone binding" evidence=IDA] InterPro:IPR000571
InterPro:IPR001965 InterPro:IPR003121 InterPro:IPR003169
InterPro:IPR004343 InterPro:IPR018144 InterPro:IPR019787
Pfam:PF00642 Pfam:PF02201 Pfam:PF02213 Pfam:PF03126 PROSITE:PS50016
PROSITE:PS50103 PROSITE:PS50829 PROSITE:PS51360 SMART:SM00249
SMART:SM00444 SMART:SM00719 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006352 GO:GO:0016570 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 eggNOG:NOG12793
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0031047 GO:GO:0042393
SUPFAM:SSF55277 EMBL:AC007047 EMBL:DQ446507 IPI:IPI00546025
PIR:F84540 PIR:G84540 RefSeq:NP_179241.4 UniGene:At.40269
HSSP:Q9FT92 PaxDb:Q9SIV5 PRIDE:Q9SIV5 GeneID:816147
KEGG:ath:AT2G16485 TAIR:At2g16485 HOGENOM:HOG000215989
InParanoid:Q9SIV5 ArrayExpress:Q9SIV5 Genevestigator:Q9SIV5
GO:GO:0032776 GO:GO:0010964 SUPFAM:SSF47592 Uniprot:Q9SIV5
Length = 1773
Score = 275 (101.9 bits), Expect = 2.2e-22, P = 2.2e-22
Identities = 69/180 (38%), Positives = 111/180 (61%)
Query: 141 EKQKSRKVPLKKLCLETPKSCWAAIVPDNIKLVYLKRSLVQDLLKDSETFECKVVGSFVR 200
+K+K+RK ++K ++ +AA+ NI L+YL+RSLV+DLL+DS FE KV +FVR
Sbjct: 922 KKRKTRKKNVRK-GRQSNLDDFAAVDMHNINLIYLRRSLVEDLLEDSTAFEEKVASAFVR 980
Query: 201 VKSDPNDYLQKNSHQLLQVIGTKKVPG---TDDKSTEILLKVSNFVKD--IRIATLSDDN 255
++ N +++ ++L+QV+GT K P K+T+ +L++ N K I I +S+ +
Sbjct: 981 LRISGNQ--KQDLYRLVQVVGTSKAPEPYKVGKKTTDYVLEILNLDKTEVISIDIISNQD 1038
Query: 256 FSEEECEDLRQRVKDGLLKRPTVVELQEKTQILHEDITKHWLVRELALLQKLIDRANVKG 315
F+E+EC+ L+Q +K GL+ R TV ++QEK L E K+ L E+ L DRA+ G
Sbjct: 1039 FTEDECKRLKQSIKCGLINRLTVGDIQEKAIALQEVRVKNLLEAEILRFSHLRDRASDMG 1098
Score = 227 (85.0 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 72/250 (28%), Positives = 122/250 (48%)
Query: 41 WGSIPLIEFLQSLGKDTTQQISRYDVTDIINKYVNENKLVHSVKKKRVVSDERLLSLFGK 100
W S L++ + + + + +V ++ Y+ L +K +V+ D RL +LFGK
Sbjct: 807 WASKELLDLVVHMRRGDRSFLPMLEVQTLLLAYIKRYNLRDPRRKSQVICDSRLQNLFGK 866
Query: 101 KSFLRIKIYDLLEAHYA---ENQXXXXXXXXXXXXXXN------NL---FSSEKQKSRKV 148
++ +LL++H+ +NQ N NL S K K RK
Sbjct: 867 SHVGHFEMLNLLDSHFLKKEQNQADDIQGDIVDTEEPNHVDVDENLDHPVKSGKDKKRKT 926
Query: 149 PLKKLCLETPKSC--WAAIVPDNIKLVYLKRSLVQDLLKDSETFECKVVGSFVRVKSDPN 206
K + + +AA+ NI L+YL+RSLV+DLL+DS FE KV +FVR++ N
Sbjct: 927 RKKNVRKGRQSNLDDFAAVDMHNINLIYLRRSLVEDLLEDSTAFEEKVASAFVRLRISGN 986
Query: 207 DYLQKNSHQLLQVIGTKKVPG---TDDKSTEILLKVSNFVKDIRIATLSDDNFSEEE-CE 262
+++ ++L+QV+GT K P K+T+ +L++ N K +S D S ++ E
Sbjct: 987 Q--KQDLYRLVQVVGTSKAPEPYKVGKKTTDYVLEILNLDKT---EVISIDIISNQDFTE 1041
Query: 263 DLRQRVKDGL 272
D +R+K +
Sbjct: 1042 DECKRLKQSI 1051
>TAIR|locus:2060949 [details] [associations]
symbol:AT2G18090 "AT2G18090" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003121
InterPro:IPR003169 InterPro:IPR019787 Pfam:PF02201 Pfam:PF02213
PROSITE:PS50016 PROSITE:PS50829 SMART:SM00249 SMART:SM00444
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 SUPFAM:SSF55277
SUPFAM:SSF47592 HSSP:Q14839 EMBL:AF370586 IPI:IPI00535357
RefSeq:NP_849971.1 UniGene:At.13556 ProteinModelPortal:Q94JX1
SMR:Q94JX1 PaxDb:Q94JX1 PRIDE:Q94JX1 EnsemblPlants:AT2G18090.1
GeneID:816321 KEGG:ath:AT2G18090 TAIR:At2g18090 eggNOG:NOG281195
HOGENOM:HOG000151186 OMA:TATIAND PhylomeDB:Q94JX1
ProtClustDB:CLSN2690760 Genevestigator:Q94JX1 Uniprot:Q94JX1
Length = 824
Score = 120 (47.3 bits), Expect = 0.00044, P = 0.00044
Identities = 21/78 (26%), Positives = 45/78 (57%)
Query: 41 WGSIPLIEFLQSLGKDTTQQISRYDVTDIINKYVNENKLVHSVKKKRVVSDERLLSLFGK 100
W + L++F+ + +S+YDV ++ +YV N L +S + ++ D +L+ LFGK
Sbjct: 295 WATNELLDFVGYMKNGDISVLSKYDVQTLVLEYVRRNNLQNSPQNSEIMCDSKLMRLFGK 354
Query: 101 KSFLRIKIYDLLEAHYAE 118
+ +++ LL++H+ +
Sbjct: 355 ERVDNLEMLKLLDSHFID 372
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.377 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 334 320 0.00084 116 3 11 22 0.42 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 5
No. of states in DFA: 606 (64 KB)
Total size of DFA: 209 KB (2117 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.71u 0.10s 27.81t Elapsed: 00:00:01
Total cpu time: 27.71u 0.10s 27.81t Elapsed: 00:00:01
Start: Fri May 10 13:34:42 2013 End: Fri May 10 13:34:43 2013