Query 019902
Match_columns 334
No_of_seqs 217 out of 456
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 08:48:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019902.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019902hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2bze_A KIAA0252 protein; human 100.0 2.5E-37 8.5E-42 270.5 10.9 126 165-293 23-153 (153)
2 3u1u_A RNA polymerase-associat 100.0 8E-38 2.7E-42 268.8 6.5 128 160-291 5-137 (137)
3 1v32_A AT5G08430, hypothetical 100.0 1.5E-34 5E-39 237.8 9.6 93 32-124 6-98 (101)
4 1v31_A Hypothetical protein RA 99.9 1E-25 3.5E-30 182.3 5.8 75 42-122 14-88 (93)
5 1uhr_A SWI/SNF related, matrix 99.9 1.3E-25 4.4E-30 181.8 5.6 75 42-122 14-88 (93)
6 3dac_M MDM4 protein; MDMX, MDM 96.9 0.0018 6.1E-08 55.0 6.3 77 42-119 27-107 (130)
7 1z1m_A Ubiquitin-protein ligas 96.7 0.0039 1.3E-07 52.3 7.4 80 42-122 30-110 (119)
8 1ycq_A MDM2, MDM2; anti-oncoge 96.4 0.0066 2.3E-07 50.0 6.3 74 43-117 15-89 (107)
9 3fea_A MDM4 protein; HDMX, HDM 96.3 0.0058 2E-07 49.9 5.5 75 43-118 19-97 (100)
10 2z5s_M MDM4 protein, zebrafish 95.9 0.012 4.1E-07 50.3 5.9 74 43-117 27-101 (140)
11 2axi_A Ubiquitin-protein ligas 95.6 0.011 3.8E-07 49.2 4.5 74 43-117 15-89 (115)
12 2do5_A Splicing factor 3B subu 56.9 25 0.00084 25.5 5.4 43 35-80 5-48 (58)
13 2w6a_A ARF GTPase-activating p 54.6 50 0.0017 24.5 6.9 49 250-310 4-52 (63)
14 1f80_D Acyl carrier protein; t 41.9 23 0.00079 25.5 3.5 58 60-120 2-59 (81)
15 2kwl_A ACP, acyl carrier prote 36.6 34 0.0012 24.8 3.8 60 59-121 3-62 (84)
16 1hlv_A CENP-B, major centromer 35.3 54 0.0019 25.6 5.0 35 257-292 77-111 (131)
17 2w7n_A TRFB transcriptional re 32.4 29 0.001 27.8 2.9 60 255-324 4-71 (101)
18 2cnr_A FAS, ACP, acyl carrier 29.6 71 0.0024 22.6 4.5 57 61-120 3-59 (82)
19 2rbd_A BH2358 protein; putativ 27.4 29 0.00098 29.4 2.2 73 253-326 95-167 (171)
20 2lol_A ACP, acyl carrier prote 27.2 81 0.0028 22.4 4.4 57 61-120 2-58 (81)
21 1dv5_A APO-DCP, APO-D-alanyl c 26.7 40 0.0014 24.6 2.7 57 62-121 1-57 (80)
22 2dnw_A Acyl carrier protein; A 22.6 95 0.0033 23.4 4.2 60 58-120 8-67 (99)
23 1x4t_A Hypothetical protein LO 22.6 1.4E+02 0.0049 23.7 5.2 28 257-293 22-49 (92)
No 1
>2bze_A KIAA0252 protein; human RTF1 PLUS3 domain, transcription, elongation, PAF1 complex, histone H3 methylation, H2B ubiquitination, CDC73, LEO1, CTR9; NMR {Homo sapiens} SCOP: b.34.21.1
Probab=100.00 E-value=2.5e-37 Score=270.51 Aligned_cols=126 Identities=19% Similarity=0.305 Sum_probs=115.9
Q ss_pred cCccccceeeeeHHHHHHHhcCcccccccccccEEEEecCCCCCCCccceeEEEEeeeeecCCC---CCcccceeEEEeC
Q 019902 165 IVPDNIKLVYLKRSLVQDLLKDSETFECKVVGSFVRVKSDPNDYLQKNSHQLLQVIGTKKVPGT---DDKSTEILLKVSN 241 (334)
Q Consensus 165 i~~~nI~lIyL~Rsl~~~l~~~P~~Fe~kVvGcFVRI~ig~~~~~~~~~YRLvqV~Gv~k~~~~---g~~~Td~~L~v~~ 241 (334)
.+.+||++|||+|++|++||++| +|+++|+||||||+||++. ++++||||||+|+.++.+. |++.||++|.|.+
T Consensus 23 ~~l~di~~irL~Rs~l~~~~~~P-~Fe~~V~GcFVRV~ig~~~--~~~~YRl~qI~gv~~~~k~Y~l~~~~T~~~L~l~~ 99 (153)
T 2bze_A 23 SLPEELNRVRLSRHKLERWCHMP-FFAKTVTGCFVRIGIGNHN--SKPVYRVAEITGVVETAKVYQLGGTRTNKGLQLRH 99 (153)
T ss_dssp CCHHHHHHSEECHHHHHHHSSSS-SCHHHHTTCEEEEESSTTS--SSCCEEEEEEEEEEEEEEEEEETTEEEEEEEEEES
T ss_pred CCHHHhhheEEEHHHHHHHhcCC-chhHheEEEEEEEEeCCCC--CCccEEEEEEEeEEecCcccccCCcccceEEEEEE
Confidence 37889999999999999999999 7999999999999999864 5689999999999987663 8889999999954
Q ss_pred --CceeEEeeeccCCCCCHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHh
Q 019902 242 --FVKDIRIATLSDDNFSEEECEDLRQRVKDGLLKRPTVVELQEKTQILHEDIT 293 (334)
Q Consensus 242 --~~k~~~i~~iSd~~FTEeE~~r~~q~~~~~~~krPTv~dl~eKa~~i~~~i~ 293 (334)
..++|+|++|||++|||+||++|++.|+++++++||+.+|++|+++|+++++
T Consensus 100 g~~~r~~~m~~vSN~~fte~Ef~~w~~~~~~~~~~~PT~~~v~~K~~~i~~a~n 153 (153)
T 2bze_A 100 GNDQRVFRLEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEINKKELSIKEALN 153 (153)
T ss_dssp SSCEEEECGGGBCCSCCCHHHHHHHHHHHHHHTCCCCBHHHHHHHHHHHHHHC-
T ss_pred CCcceEEEeeEeeCCCCCHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHhC
Confidence 4469999999999999999999999999999999999999999999999875
No 2
>3u1u_A RNA polymerase-associated protein RTF1 homolog; plus-3, transcription elongation, structural genomics, struc genomics consortium, SGC; 1.80A {Homo sapiens} PDB: 2db9_A
Probab=100.00 E-value=8e-38 Score=268.80 Aligned_cols=128 Identities=20% Similarity=0.284 Sum_probs=113.7
Q ss_pred ccccccCccccceeeeeHHHHHHHhcCcccccccccccEEEEecCCCCCCCccceeEEEEeeeeecCCC---CCccccee
Q 019902 160 SCWAAIVPDNIKLVYLKRSLVQDLLKDSETFECKVVGSFVRVKSDPNDYLQKNSHQLLQVIGTKKVPGT---DDKSTEIL 236 (334)
Q Consensus 160 ~~~aai~~~nI~lIyL~Rsl~~~l~~~P~~Fe~kVvGcFVRI~ig~~~~~~~~~YRLvqV~Gv~k~~~~---g~~~Td~~ 236 (334)
..|.+ +.+||++|||+|++|++||++| +|+++|+||||||+||+++ ++++||||||+||.++.+. |++.||++
T Consensus 5 ~~~v~-~l~dl~~i~L~R~~l~~~~~~P-~Fe~~V~GcFVRv~ig~~~--~~~~Yrl~qI~gv~~~~k~Y~l~~~~T~~~ 80 (137)
T 3u1u_A 5 SQPVS-LPEELNRVRLSRHKLERWCHMP-FFAKTVTGCFVRIGIGNHN--SKPVYRVAEITGVVETAKVYQLGGTRTNKG 80 (137)
T ss_dssp TSBCC-SHHHHHTTBCCHHHHHHHTTST-THHHHHTTCEEEEEEEC------CEEEEEEEEEEEEEEEEEEETTEEEEEE
T ss_pred cCCCC-CHHHhcceEEEHHHHHHHhcCC-ChhHheEEEEEEEEeCCCC--CCccEEEEEEEEEEecCcccccCCceeeEE
Confidence 35555 8899999999999999999999 7999999999999999986 5689999999999876553 88999999
Q ss_pred EEEe-C-CceeEEeeeccCCCCCHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHH
Q 019902 237 LKVS-N-FVKDIRIATLSDDNFSEEECEDLRQRVKDGLLKRPTVVELQEKTQILHED 291 (334)
Q Consensus 237 L~v~-~-~~k~~~i~~iSd~~FTEeE~~r~~q~~~~~~~krPTv~dl~eKa~~i~~~ 291 (334)
|.+. | ..++|+|++|||++|||+||++|++.|+++++++||+.+|++|+++|+++
T Consensus 81 L~l~~g~~~r~~~~~~vSN~~fte~E~~~w~~~~~~~~~~~Pt~~~l~~K~~~i~~a 137 (137)
T 3u1u_A 81 LQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEINKKELSIKEA 137 (137)
T ss_dssp EEEEETTEEEEEEGGGBCSSCCCHHHHHHHHHHHHHHTCCCCBHHHHHHHHHHTCCC
T ss_pred EEEEeCCcceEEEeeeecCCCCCHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhC
Confidence 9994 4 34799999999999999999999999999999999999999999999863
No 3
>1v32_A AT5G08430, hypothetical protein RAFL09-47-K03; SWI/SNF complex subunit, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.42.1.1
Probab=100.00 E-value=1.5e-34 Score=237.84 Aligned_cols=93 Identities=54% Similarity=0.922 Sum_probs=88.4
Q ss_pred CCCcccccCCCCHHHHHHHhhcCCCCCCccchHHHHHHHHHHhhhcCCCCCCCCCeeecchhhhhhhCCCccchHhHHHH
Q 019902 32 RSKKVKFDGWGSIPLIEFLQSLGKDTTQQISRYDVTDIINKYVNENKLVHSVKKKRVVSDERLLSLFGKKSFLRIKIYDL 111 (334)
Q Consensus 32 ~~k~~~~~~w~S~eL~~fl~~~g~d~~~~lsr~~v~k~lw~YIK~nnLqDP~~Kr~IiCDekLk~lFgk~~v~~f~m~kl 111 (334)
.+|+.+|+||+|++|++||++||.+|++++||++|++.||+|||+||||||.||+.|+||++|+.|||+++|+||+|+++
T Consensus 6 ~~~~~~~~~w~S~eLa~fl~~iG~~~~~~~sR~eVvk~lW~YIK~nnLQdp~~Kr~I~cD~kLk~lFg~~~v~~~~m~kl 85 (101)
T 1v32_A 6 SGKRFEFVGWGSRQLIEFLHSLGKDTSEMISRYDVSDTIAKYISKEGLLDPSNKKKVVCDKRLVLLFGTRTIFRMKVYDL 85 (101)
T ss_dssp CSSCCSSSSSSCHHHHHHHHHHTCCCSSCCCHHHHHHHHHHHHHHHTCBCSSCTTEEECCSHHHHHTCCSEEETTHHHHH
T ss_pred CCCcceecccCCHHHHHHHHHcCCCCccccCHHHHHHHHHHHHHhhcCcCcccCCeeeccHHHHHHHCCCcccHHHHHHH
Confidence 35677999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccccCCCCCC
Q 019902 112 LEAHYAENQFESD 124 (334)
Q Consensus 112 L~~H~~~~~~~~~ 124 (334)
|.+||.++++.++
T Consensus 86 L~~Hl~~~~e~~~ 98 (101)
T 1v32_A 86 LEKHYKENQDSGP 98 (101)
T ss_dssp HHHHSCSCCCCCS
T ss_pred HHHHcCcccccCC
Confidence 9999999887543
No 4
>1v31_A Hypothetical protein RAFL11-05-P19; SWI/SNF complex subunit, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: a.42.1.1
Probab=99.92 E-value=1e-25 Score=182.33 Aligned_cols=75 Identities=19% Similarity=0.212 Sum_probs=71.9
Q ss_pred CCHHHHHHHhhcCCCCCCccchHHHHHHHHHHhhhcCCCCCCCCCeeecchhhhhhhCCCccchHhHHHHHHhccccCCC
Q 019902 42 GSIPLIEFLQSLGKDTTQQISRYDVTDIINKYVNENKLVHSVKKKRVVSDERLLSLFGKKSFLRIKIYDLLEAHYAENQF 121 (334)
Q Consensus 42 ~S~eL~~fl~~~g~d~~~~lsr~~v~k~lw~YIK~nnLqDP~~Kr~IiCDekLk~lFgk~~v~~f~m~klL~~H~~~~~~ 121 (334)
.|++|++||| ..++||++|++.||+|||+||||||.+|+.|+||++|+.|||+++|.||+|+++|++||.+.++
T Consensus 14 lS~~La~~lG------~~~~sr~evvk~lW~YIK~n~Lqdp~~k~~I~cD~~L~~lfg~~~v~~~~~~klL~~Hl~p~~P 87 (93)
T 1v31_A 14 LSTALMDVLG------IEVETRPRIIAAIWHYVKARKLQNPNDPSFFNCDAALQKVFGEEKLKFTMVSQKISHHLSPPPP 87 (93)
T ss_dssp CCHHHHHHSC------CSEECSHHHHHHHHHHHHHTTCBCSSCSSEEECCSHHHHHSCSSEEETTTTHHHHHHHCBCCCC
T ss_pred cCHHHHHHHC------CCccCHHHHHHHHHHHHHHccCcCcccCceeehhHHHHHHhCCCcccHHHHHHHHHHhcCCCCC
Confidence 7999999997 5789999999999999999999999999999999999999999999999999999999998876
Q ss_pred C
Q 019902 122 E 122 (334)
Q Consensus 122 ~ 122 (334)
.
T Consensus 88 i 88 (93)
T 1v31_A 88 S 88 (93)
T ss_dssp S
T ss_pred e
Confidence 4
No 5
>1uhr_A SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily...; structural genomics, chromatin remodeling; NMR {Mus musculus} SCOP: a.42.1.1
Probab=99.91 E-value=1.3e-25 Score=181.79 Aligned_cols=75 Identities=17% Similarity=0.185 Sum_probs=71.8
Q ss_pred CCHHHHHHHhhcCCCCCCccchHHHHHHHHHHhhhcCCCCCCCCCeeecchhhhhhhCCCccchHhHHHHHHhccccCCC
Q 019902 42 GSIPLIEFLQSLGKDTTQQISRYDVTDIINKYVNENKLVHSVKKKRVVSDERLLSLFGKKSFLRIKIYDLLEAHYAENQF 121 (334)
Q Consensus 42 ~S~eL~~fl~~~g~d~~~~lsr~~v~k~lw~YIK~nnLqDP~~Kr~IiCDekLk~lFgk~~v~~f~m~klL~~H~~~~~~ 121 (334)
.|++|++||| ..++||++|++.||+|||+||||||.||+.|+||++|+.|||+++|.||+|+++|++||.+.++
T Consensus 14 lS~~La~~lG------~~~~sr~evvk~lW~YIK~n~Lqdp~~k~~I~cD~~Lk~lfg~~~v~~~~~~klL~~Hl~p~~P 87 (93)
T 1uhr_A 14 LDPRLARLLG------IHTQTRPVIIQALWQYIKTHKLQDPHEREFVLCDKYLQQIFESQRMKFSEIPQRLHALLMPPEP 87 (93)
T ss_dssp ECTTHHHHTC------CSEEEHHHHHHHHHHHHHHTTCBCSSCSSEECCCTTHHHHTCCSSEEGGGSHHHHHHHEECSSC
T ss_pred cCHHHHHHHC------CCccCHHHHHHHHHHHHHhccCCCccccceeechHHHHHHhCCCcccHHHHHHHHHHhcCCCCC
Confidence 6999999997 5799999999999999999999999999999999999999999999999999999999998876
Q ss_pred C
Q 019902 122 E 122 (334)
Q Consensus 122 ~ 122 (334)
.
T Consensus 88 I 88 (93)
T 1uhr_A 88 S 88 (93)
T ss_dssp C
T ss_pred e
Confidence 5
No 6
>3dac_M MDM4 protein; MDMX, MDM4, HDMX, HDM4, MDM-4, MDM-X, MDM2, HDM2, nucleus, oncogene, apoptosis, cell cycle, disease mutation; 1.80A {Danio rerio}
Probab=96.86 E-value=0.0018 Score=54.99 Aligned_cols=77 Identities=18% Similarity=0.316 Sum_probs=68.6
Q ss_pred CCHHHHHHHhhcCCCCCCccchHHHHHHHHHHhhhcCCCCCCCCCeeecc-hhhhhhhCCCccchHh---HHHHHHhccc
Q 019902 42 GSIPLIEFLQSLGKDTTQQISRYDVTDIINKYVNENKLVHSVKKKRVVSD-ERLLSLFGKKSFLRIK---IYDLLEAHYA 117 (334)
Q Consensus 42 ~S~eL~~fl~~~g~d~~~~lsr~~v~k~lw~YIK~nnLqDP~~Kr~IiCD-ekLk~lFgk~~v~~f~---m~klL~~H~~ 117 (334)
.-++|..+|.+.|.. ...++..+|.-.+-.||-.+.|.||.+...|.|- +.|..|||++++.+-+ +...|.+++.
T Consensus 27 pk~~lL~iLq~aGA~-~dvfT~keVm~YLgqYI~~KqLyd~~~qhiV~C~~D~LG~llGv~sFSVkdp~~L~~mL~~NLv 105 (130)
T 3dac_M 27 PRAPLLQILKVAGAQ-EEVFTVKEVMHYLGQYIMMKQLYDKQRQHIVHCHDDPLGELLEVGSFSVKNPSPLYEMLKRNLV 105 (130)
T ss_dssp ECHHHHHHHHHTTCC-CSSEEHHHHHHHHHHHHHHHTCBCSSSTTEEECTTSHHHHHHTSSEEETTSCHHHHHHHHHHEE
T ss_pred CcHHHHHHHHHhccC-cceeehHHHHHHHHHhhhhhhccCccccceeEeCCcccccccCCcceeecCcHHHHHHHHhhee
Confidence 356899999998875 4789999999999999999999999999999995 5677799999999999 9999999987
Q ss_pred cC
Q 019902 118 EN 119 (334)
Q Consensus 118 ~~ 119 (334)
.-
T Consensus 106 ~~ 107 (130)
T 3dac_M 106 IL 107 (130)
T ss_dssp EC
T ss_pred cc
Confidence 63
No 7
>1z1m_A Ubiquitin-protein ligase E3 MDM2; peptide-binding groove, psudosymmetry, alpha-beta domains; NMR {Homo sapiens}
Probab=96.75 E-value=0.0039 Score=52.26 Aligned_cols=80 Identities=19% Similarity=0.239 Sum_probs=68.6
Q ss_pred CCHHHHHHHhhcCCCCCCccchHHHHHHHHHHhhhcCCCCCCCCCeeecch-hhhhhhCCCccchHhHHHHHHhccccCC
Q 019902 42 GSIPLIEFLQSLGKDTTQQISRYDVTDIINKYVNENKLVHSVKKKRVVSDE-RLLSLFGKKSFLRIKIYDLLEAHYAENQ 120 (334)
Q Consensus 42 ~S~eL~~fl~~~g~d~~~~lsr~~v~k~lw~YIK~nnLqDP~~Kr~IiCDe-kLk~lFgk~~v~~f~m~klL~~H~~~~~ 120 (334)
..++|..+|...|... ...+..+|.-.+-.||=...|.||++...|.|.. .|-.|||..++.+-+-..+...|.....
T Consensus 30 Pk~~LLkiLq~aGA~~-~vfT~keV~~YLgqYIm~KqLyd~~~qhiV~C~~D~LG~l~g~~~Fsvkdp~~l~~ml~~nLv 108 (119)
T 1z1m_A 30 PKPLLLKLLKSVGAQK-DTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLV 108 (119)
T ss_dssp CSTTSHHHHHHHTCCC-SCCCTTHHHHHHHHHHHTTTCSCSSSSCEECCTTSHHHHHSCCSCEETTCHHHHHHHHSCSCC
T ss_pred ccHHHHHHHHHhcccc-ceeechheeehhhhhhhHhhhcccccCcEEeeCCcccccccCccceeecCcHHHHHHHHHhcc
Confidence 3468999999988764 7899999999999999999999999999999965 4588999999999998888888876444
Q ss_pred CC
Q 019902 121 FE 122 (334)
Q Consensus 121 ~~ 122 (334)
..
T Consensus 109 ~~ 110 (119)
T 1z1m_A 109 VV 110 (119)
T ss_dssp CC
T ss_pred cc
Confidence 33
No 8
>1ycq_A MDM2, MDM2; anti-oncogene, DNA-binding, transcription regulation, nuclear protein, complex (oncogene protein/peptide), phosphorylation, activator; 2.30A {Xenopus laevis} SCOP: a.42.1.1
Probab=96.36 E-value=0.0066 Score=50.03 Aligned_cols=74 Identities=19% Similarity=0.249 Sum_probs=64.5
Q ss_pred CHHHHHHHhhcCCCCCCccchHHHHHHHHHHhhhcCCCCCCCCCeeecchh-hhhhhCCCccchHhHHHHHHhccc
Q 019902 43 SIPLIEFLQSLGKDTTQQISRYDVTDIINKYVNENKLVHSVKKKRVVSDER-LLSLFGKKSFLRIKIYDLLEAHYA 117 (334)
Q Consensus 43 S~eL~~fl~~~g~d~~~~lsr~~v~k~lw~YIK~nnLqDP~~Kr~IiCDek-Lk~lFgk~~v~~f~m~klL~~H~~ 117 (334)
.++|..+|...|... ...+..+|.-.+-.||=...|.||.+...|.|... |-.|||..++.+-+-..+.+.|..
T Consensus 15 k~~LLklL~~~GA~~-~~fT~keVm~YLgqYI~~KqLyd~~~qhiV~C~~D~LG~l~g~~~Fsvkdp~~l~~ml~~ 89 (107)
T 1ycq_A 15 TPLLLSLLKSAGAQK-ETFTMKEVIYHLGQYIMAKQLYDEKQQHIVHCSNDPLGELFGVQEFSVKEPRRLYAMISR 89 (107)
T ss_dssp CHHHHHHHHHTTCCC-SCBCHHHHHHHHHHHHHHHTCBCSSSTTEEECTTSHHHHHHTCSEEETTCHHHHHHHHHT
T ss_pred cHHHHHHHHHhcccc-ceeeehhhhhhHHHHHhHHhhcccccCcEEeeCCcccccccCccceeecCcHHHHHHHHH
Confidence 468999999988764 78999999999999999999999999999999654 588999999999888766666654
No 9
>3fea_A MDM4 protein; HDMX, HDM4,human MDM4, human MDMX, protein-protein interaction, metal-binding; HET: PM3 6CW; 1.33A {Homo sapiens} SCOP: a.42.1.0 PDB: 3fe7_A* 3u15_A* 2vyr_A 3lbj_E* 3fdo_A 3dab_A 3jzp_A 3jzo_A 3jzq_A 3eqy_A
Probab=96.28 E-value=0.0058 Score=49.86 Aligned_cols=75 Identities=21% Similarity=0.419 Sum_probs=65.8
Q ss_pred CHHHHHHHhhcCCCCCCccchHHHHHHHHHHhhhcCCCCCCCCCeeecch-hhhhhhCCCccchH---hHHHHHHhcccc
Q 019902 43 SIPLIEFLQSLGKDTTQQISRYDVTDIINKYVNENKLVHSVKKKRVVSDE-RLLSLFGKKSFLRI---KIYDLLEAHYAE 118 (334)
Q Consensus 43 S~eL~~fl~~~g~d~~~~lsr~~v~k~lw~YIK~nnLqDP~~Kr~IiCDe-kLk~lFgk~~v~~f---~m~klL~~H~~~ 118 (334)
-++|..+|.+.|.. ...++..+|.-.+=.||-.+.|.||.+...|.|.. -|-.|||++++.+- .+...|.+|+..
T Consensus 19 k~~lL~iLq~aGA~-~d~fT~keVm~YLgqYI~~KqLyd~~~qhiV~C~~D~LG~l~G~~sFsvkdp~~l~~ml~~nLv~ 97 (100)
T 3fea_A 19 KLPLLKILHAAGAQ-GEMFTVKEVMHYLGQYIMVKQLYDQQEQHMVYCGGDLLGELLGRQSFSVKDPSPLYDMLRKNLVT 97 (100)
T ss_dssp CHHHHHHHHHTTCC-SSCBCHHHHHHHHHHHHHHTTCEETTEEEEEECTTSHHHHHHTCSEEETTCCHHHHHHHHHHEEC
T ss_pred cHHHHHHHHHhccC-cceeehHHHHHHHHHhhhhhhccCccccceEEeCCCccccccCCcceeecCchHHHHHHHhhcee
Confidence 46899999998875 47899999999999999999999999999999964 56679999999988 788888888763
No 10
>2z5s_M MDM4 protein, zebrafish MDMX; MDMX, MDM4, acetylation, activator, anti-oncogene, apoptosis, cell cycle, cytoplasm, disease mutation, DNA- binding; 2.30A {Danio rerio} PDB: 2z5t_M
Probab=95.91 E-value=0.012 Score=50.33 Aligned_cols=74 Identities=18% Similarity=0.239 Sum_probs=63.3
Q ss_pred CHHHHHHHhhcCCCCCCccchHHHHHHHHHHhhhcCCCCCCCCCeeecch-hhhhhhCCCccchHhHHHHHHhccc
Q 019902 43 SIPLIEFLQSLGKDTTQQISRYDVTDIINKYVNENKLVHSVKKKRVVSDE-RLLSLFGKKSFLRIKIYDLLEAHYA 117 (334)
Q Consensus 43 S~eL~~fl~~~g~d~~~~lsr~~v~k~lw~YIK~nnLqDP~~Kr~IiCDe-kLk~lFgk~~v~~f~m~klL~~H~~ 117 (334)
-++|..+|...|.. ...++.-+|.-.|-.||=...|.||++...|.|.. .|-.|||+.++.+-+-..+...+..
T Consensus 27 k~~LLkiLq~aGA~-~~~fT~keVm~YLGqYIm~KqLYD~~~qhiV~C~~D~LG~l~Gv~sFSVKdp~~ly~ML~~ 101 (140)
T 2z5s_M 27 RAPLLQILKVAGAQ-EEVFTLKEVMHYLGQYIMMKQLYDKQRQHIVHCHDDPLGELLEVGSFSVKNPSPVYEMLKR 101 (140)
T ss_dssp CHHHHHHHHHTTCC-CSCBCHHHHHHHHHHHHHHHTCBCSSSTTEEECTTSHHHHHHTSSEEETTBCHHHHHHHHH
T ss_pred cHHHHHHHHHhCcc-cceeeHHHHHHHHHHHHHHhhhcccccCcEEeeCCcccccccCccceeecCcHHHHHHHHH
Confidence 36899999988864 46899999999999999999999999999999965 4588999999999887766665543
No 11
>2axi_A Ubiquitin-protein ligase E3 MDM2; drug design, protein-protein interactions, ligase, LIGA inhibitor complex; HET: 6CW MPO; 1.40A {Homo sapiens} SCOP: a.42.1.1 PDB: 1ycr_A 2gv2_A* 1t4f_M* 3jzr_A 3g03_A 3tu1_A* 3jzk_A* 1t4e_A* 3lbl_A* 4dij_A* 3lbk_A* 3v3b_A* 3jzs_A 3eqs_A 3iux_A* 3iwy_A* 3lnj_A* 3lnz_A 1rv1_A* 1ttv_A*
Probab=95.62 E-value=0.011 Score=49.23 Aligned_cols=74 Identities=20% Similarity=0.289 Sum_probs=64.9
Q ss_pred CHHHHHHHhhcCCCCCCccchHHHHHHHHHHhhhcCCCCCCCCCeeecch-hhhhhhCCCccchHhHHHHHHhccc
Q 019902 43 SIPLIEFLQSLGKDTTQQISRYDVTDIINKYVNENKLVHSVKKKRVVSDE-RLLSLFGKKSFLRIKIYDLLEAHYA 117 (334)
Q Consensus 43 S~eL~~fl~~~g~d~~~~lsr~~v~k~lw~YIK~nnLqDP~~Kr~IiCDe-kLk~lFgk~~v~~f~m~klL~~H~~ 117 (334)
.++|..+|...|... ...+..+|.-.+-.||=...|.||.+...|.|.. .|-.|||+.++.+-+-..+...|..
T Consensus 15 k~~LLklLq~~GA~~-~vfT~keVm~YLgqYIm~KqLyd~~~qhiV~C~~D~LG~l~g~~~Fsvkdp~~l~~ml~~ 89 (115)
T 2axi_A 15 KPLLLKLLKSVGAQK-DTYTMKEVLFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYR 89 (115)
T ss_dssp CHHHHHHHHHTTCCC-SCEEHHHHHHHHHHHHHHHTCEETTEEEEEECTTSHHHHHHSSSEEETTCHHHHHHHHHT
T ss_pred cHHHHHHHHHhcccc-ceeechhheehhhhhhhHhhhcccccCcEEeeCCcccccccCccceeecCcHHHHHHHHH
Confidence 468999999988764 7899999999999999999999999999999965 4588999999999887777776654
No 12
>2do5_A Splicing factor 3B subunit 2; SAP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.88 E-value=25 Score=25.47 Aligned_cols=43 Identities=19% Similarity=0.417 Sum_probs=35.5
Q ss_pred cccccCCCCHHHHHHHhhcCCCCCC-ccchHHHHHHHHHHhhhcCCC
Q 019902 35 KVKFDGWGSIPLIEFLQSLGKDTTQ-QISRYDVTDIINKYVNENKLV 80 (334)
Q Consensus 35 ~~~~~~w~S~eL~~fl~~~g~d~~~-~lsr~~v~k~lw~YIK~nnLq 80 (334)
..-|..|.-+||++=|+.+|. . .=+|.+++.+|-.|.++-+.-
T Consensus 5 ~~~ygaW~~~ELQaKLaE~GA---Pi~g~REElvdRLk~Y~~QtGi~ 48 (58)
T 2do5_A 5 SSGYGAWAAQELQAKLAEIGA---PIQGNREELVERLQSYTRQTGIV 48 (58)
T ss_dssp CCCSCSSCHHHHHHHHHHHTC---CCCSCHHHHHHHHHHHHHHHCCC
T ss_pred CCCcccccCHHHHHHHHHhCC---cccccHHHHHHHHHHHhhcccee
Confidence 345778999999999999983 3 347999999999999887754
No 13
>2w6a_A ARF GTPase-activating protein GIT1; PIX, zinc, signaling protein, CAT-1, cytoplasm, ANK repeat, coiled-coil, zinc-finger, metal-binding; 1.40A {Rattus norvegicus}
Probab=54.59 E-value=50 Score=24.50 Aligned_cols=49 Identities=24% Similarity=0.208 Sum_probs=34.1
Q ss_pred eccCCCCCHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHH
Q 019902 250 TLSDDNFSEEECEDLRQRVKDGLLKRPTVVELQEKTQILHEDITKHWLVRELALLQKLIDR 310 (334)
Q Consensus 250 ~iSd~~FTEeE~~r~~q~~~~~~~krPTv~dl~eKa~~i~~~i~~~w~e~El~~L~~lid~ 310 (334)
.+||.++|-+||-.....+.. -+.|+.. =.-++.=+.+|+.+||+.|..
T Consensus 4 dlsDgpit~qeylevK~ALaa----------SeAkiQQ--LmkVN~~ls~Elr~mQ~~lq~ 52 (63)
T 2w6a_A 4 GSSDGAVTLQEYLELKKALAT----------SEAKVQQ--LMKVNSSLSDELRKLQREIHK 52 (63)
T ss_dssp C--CCSSCHHHHHHHHHHHHH----------HHHHHHH--HHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCcchHHHHHHHHHHHHh----------hHHHHHH--HHHHhHhhhHHHHHHHHHHHH
Confidence 589999999999988877654 3333333 344677788999998887654
No 14
>1f80_D Acyl carrier protein; transferase; HET: PN2; 2.30A {Bacillus subtilis} SCOP: a.28.1.1 PDB: 2x2b_A* 1hy8_A
Probab=41.93 E-value=23 Score=25.46 Aligned_cols=58 Identities=12% Similarity=0.142 Sum_probs=44.9
Q ss_pred ccchHHHHHHHHHHhhhcCCCCCCCCCeeecchhhhhhhCCCccchHhHHHHHHhccccCC
Q 019902 60 QISRYDVTDIINKYVNENKLVHSVKKKRVVSDERLLSLFGKKSFLRIKIYDLLEAHYAENQ 120 (334)
Q Consensus 60 ~lsr~~v~k~lw~YIK~nnLqDP~~Kr~IiCDekLk~lFgk~~v~~f~m~klL~~H~~~~~ 120 (334)
+|++.++...|.++|.+.-=.+| ..|-.|..|..-+|-+++...++...|+.+|--..
T Consensus 2 ~m~~~~i~~~l~~~l~~~l~~~~---~~i~~~~~l~~dlG~DSl~~vel~~~le~~fgi~i 59 (81)
T 1f80_D 2 PLGSADTLERVTKIIVDRLGVDE---ADVKLEASFKEDLGADXLDVVELVMELEDEFDMEI 59 (81)
T ss_dssp ---CCHHHHHHHHHHHHHSSCCS---SCCCTTCBHHHHSCCCHHHHHHHHHHHHHHTTCCC
T ss_pred CCCHHHHHHHHHHHHHHHHCCCH---HhCCCccchHHHcCCcHHHHHHHHHHHHHHhCCcc
Confidence 57888999999999987642333 35889999978899999999999999999985433
No 15
>2kwl_A ACP, acyl carrier protein; structural genomics, seattle structura genomics center for infectious disease, ssgcid, lipid bindi protein; NMR {Borrelia burgdorferi}
Probab=36.65 E-value=34 Score=24.82 Aligned_cols=60 Identities=12% Similarity=0.197 Sum_probs=48.5
Q ss_pred CccchHHHHHHHHHHhhhcCCCCCCCCCeeecchhhhhhhCCCccchHhHHHHHHhccccCCC
Q 019902 59 QQISRYDVTDIINKYVNENKLVHSVKKKRVVSDERLLSLFGKKSFLRIKIYDLLEAHYAENQF 121 (334)
Q Consensus 59 ~~lsr~~v~k~lw~YIK~nnLqDP~~Kr~IiCDekLk~lFgk~~v~~f~m~klL~~H~~~~~~ 121 (334)
..|++.++...|.+.|.+.-=.+| ..|-.|..|..-+|-+++.+.++...|+.+|--..+
T Consensus 3 ~~m~~~~i~~~l~~~i~~~l~~~~---~~i~~~~~l~~dlG~DSl~~vel~~~le~~fgi~i~ 62 (84)
T 2kwl_A 3 GSMDNDEIFSKVRSIISEQLDKKE---DEITTDSRFVEDLNADSLDIYELLYLLEEAFDDKIP 62 (84)
T ss_dssp CCSTHHHHHHHHHHHHHHHHCCCG---GGCCTTTHHHHTSSSCHHHHHHHHHHHHHHHTCCTT
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCc---ccCCCCCchhhhcCCCHHHHHHHHHHHHHHHCCCcC
Confidence 368999999999999988632333 368899999778999999999999999999965443
No 16
>1hlv_A CENP-B, major centromere autoantigen B; helix-turn-helix, protein-DNA complex, riken structural genomics/proteomics initiative, RSGI; 2.50A {Homo sapiens} SCOP: a.4.1.7 a.4.1.7 PDB: 1bw6_A
Probab=35.28 E-value=54 Score=25.60 Aligned_cols=35 Identities=20% Similarity=0.136 Sum_probs=31.7
Q ss_pred CHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHH
Q 019902 257 SEEECEDLRQRVKDGLLKRPTVVELQEKTQILHEDI 292 (334)
Q Consensus 257 TEeE~~r~~q~~~~~~~krPTv~dl~eKa~~i~~~i 292 (334)
-|+.+-.|...+...+++ +|-..|.+||..|...+
T Consensus 77 ~E~~L~~Wi~~~~~~g~p-vs~~~I~~kA~~i~~~~ 111 (131)
T 1hlv_A 77 LEGLLIAWFQQIRAAGLP-VKGIILKEKALRIAEEL 111 (131)
T ss_dssp HHHHHHHHHHHHGGGTCC-CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHh
Confidence 388999999999998887 99999999999998765
No 17
>2w7n_A TRFB transcriptional repressor protein; INCP, plasmid, repressor, DNA-binding, transcription/DNA; HET: BRU; 1.85A {Escherichia coli}
Probab=32.38 E-value=29 Score=27.78 Aligned_cols=60 Identities=7% Similarity=0.007 Sum_probs=40.0
Q ss_pred CCCHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHhhhhhHHHH--------HHHHhHHHHHHhcccccccCcch
Q 019902 255 NFSEEECEDLRQRVKDGLLKRPTVVELQEKTQILHEDITKHWLVREL--------ALLQKLIDRANVKGMAQRISSIT 324 (334)
Q Consensus 255 ~FTEeE~~r~~q~~~~~~~krPTv~dl~eKa~~i~~~i~~~w~e~El--------~~L~~lid~A~EkG~~~~~~~~~ 324 (334)
..|++||++.+..+ +++++.-++. .-..+.+.+..|| ...++++.+|.+.-.....|..|
T Consensus 4 rmT~~eFe~~~~~l--------~~~~~~~~~A--~lyYv~g~tQ~eIA~~lGiSR~~VsrlL~~Ar~~~~~~~~P~g~ 71 (101)
T 2w7n_A 4 RLTESQFQEAIQGL--------EVGQQTIEIA--RGVLVDGKPQATFATSLGLTRGAVSQAVHRVWAAFEDKNLPEGY 71 (101)
T ss_dssp CCCHHHHHHHHTTC--------CCCHHHHHHH--HHHHTTCCCHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCCCTTE
T ss_pred cCCHHHHHHHHccC--------ChHHHHHHHH--HHHHHcCCCHHHHHHHHCCCHHHHHHHHHHHHHHHhccCCCCCe
Confidence 47999999988544 4555554444 4457888888888 44577888888753223566554
No 18
>2cnr_A FAS, ACP, acyl carrier protein; polykdetide, phosphopantetheine, lipid transport; NMR {Streptomyces coelicolor} PDB: 2koo_A* 2kop_A* 2koq_A* 2kor_A* 2kos_A*
Probab=29.58 E-value=71 Score=22.64 Aligned_cols=57 Identities=12% Similarity=0.116 Sum_probs=45.3
Q ss_pred cchHHHHHHHHHHhhhcCCCCCCCCCeeecchhhhhhhCCCccchHhHHHHHHhccccCC
Q 019902 61 ISRYDVTDIINKYVNENKLVHSVKKKRVVSDERLLSLFGKKSFLRIKIYDLLEAHYAENQ 120 (334)
Q Consensus 61 lsr~~v~k~lw~YIK~nnLqDP~~Kr~IiCDekLk~lFgk~~v~~f~m~klL~~H~~~~~ 120 (334)
|+|.++...|.++|.+.-=.+| ..|-.|..|..-+|-+++...++...|+.+|--..
T Consensus 3 m~~~~i~~~l~~~i~~~l~~~~---~~i~~~~~l~~dlG~DSl~~~~l~~~le~~fgi~i 59 (82)
T 2cnr_A 3 ATQEEIVAGLAEIVNEIAGIPV---EDVKLDKSFTDDLDVDSLSMVEVVVAAEERFDVKI 59 (82)
T ss_dssp CCHHHHHHHHHHHHHHHSCCCT---TTCCTTSBTTTTSCCCHHHHHHHHHHHHGGGTBCC
T ss_pred CCHHHHHHHHHHHHHHHhCCCH---HHCCCCcchhhccCCChHHHHHHHHHHHHHhCCCC
Confidence 7889999999999887532232 35788888866689999999999999999985444
No 19
>2rbd_A BH2358 protein; putative spore coat protein, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.54A {Bacillus halodurans c-125}
Probab=27.36 E-value=29 Score=29.36 Aligned_cols=73 Identities=10% Similarity=-0.015 Sum_probs=51.1
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHHHhcccccccCcchhh
Q 019902 253 DDNFSEEECEDLRQRVKDGLLKRPTVVELQEKTQILHEDITKHWLVRELALLQKLIDRANVKGMAQRISSITSV 326 (334)
Q Consensus 253 d~~FTEeE~~r~~q~~~~~~~krPTv~dl~eKa~~i~~~i~~~w~e~El~~L~~lid~A~EkG~~~~~~~~~~~ 326 (334)
+.+||+.++-.+...+...++..-+..-.+-=-.+|.. +-.+++.+.++...+..+-+++|||...-|..+..
T Consensus 95 ~ap~~D~~i~~~~l~~~k~~l~~~s~a~~es~r~Dir~-~f~~~~~~~~~~~~~i~~~m~~KGw~~~pP~~~~~ 167 (171)
T 2rbd_A 95 GARFNDPEISATISMDVAKGLVTCSQIIGQSIREDVAL-MFSQFHMAKVQFGGKMLKLNKNKGWLIPPPLHSDR 167 (171)
T ss_dssp GGCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTCCCCCCBCCC-
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCccCC
Confidence 45699999999988888765554444443333333333 33456777778889999999999999888876643
No 20
>2lol_A ACP, acyl carrier protein; lipid transport; NMR {Rickettsia prowazekii str}
Probab=27.22 E-value=81 Score=22.42 Aligned_cols=57 Identities=12% Similarity=0.180 Sum_probs=45.0
Q ss_pred cchHHHHHHHHHHhhhcCCCCCCCCCeeecchhhhhhhCCCccchHhHHHHHHhccccCC
Q 019902 61 ISRYDVTDIINKYVNENKLVHSVKKKRVVSDERLLSLFGKKSFLRIKIYDLLEAHYAENQ 120 (334)
Q Consensus 61 lsr~~v~k~lw~YIK~nnLqDP~~Kr~IiCDekLk~lFgk~~v~~f~m~klL~~H~~~~~ 120 (334)
|++.++...|.+.|.+.-=.+| ..|-.|..|..-+|-+++...++...|+.+|--..
T Consensus 2 m~~~~i~~~l~~ii~~~l~~~~---~~i~~~~~l~~dlG~DSl~~~el~~~le~~fgi~i 58 (81)
T 2lol_A 2 STTDKIEQKVIEMVAEKLNKDK---AIITTDSRFIEDLKADSLDTVELMMAIEVEYGIDI 58 (81)
T ss_dssp CSHHHHHHHHHHHHHHHSCCCT---TTCCTTCCHHHHTTCCHHHHHHHHHHHHHHHCCCC
T ss_pred CCHHHHHHHHHHHHHHHHCCCh---hhCCCCCcHHHhcCCcHHHHHHHHHHHHHHHCCCC
Confidence 6788888888888887532233 24788888877899999999999999999985443
No 21
>1dv5_A APO-DCP, APO-D-alanyl carrier protein; 3-helix bundle, transport protein; NMR {Lactobacillus casei} SCOP: a.28.1.3 PDB: 1hqb_A
Probab=26.74 E-value=40 Score=24.63 Aligned_cols=57 Identities=7% Similarity=-0.021 Sum_probs=43.6
Q ss_pred chHHHHHHHHHHhhhcCCCCCCCCCeeecchhhhhhhCCCccchHhHHHHHHhccccCCC
Q 019902 62 SRYDVTDIINKYVNENKLVHSVKKKRVVSDERLLSLFGKKSFLRIKIYDLLEAHYAENQF 121 (334)
Q Consensus 62 sr~~v~k~lw~YIK~nnLqDP~~Kr~IiCDekLk~lFgk~~v~~f~m~klL~~H~~~~~~ 121 (334)
++.++...|.++|.+.--.+| -.|-.|..|..+-+-+++.+.++.-.|+.+|--..+
T Consensus 1 ~~~~i~~~i~~il~~~~~~~~---~~i~~d~~l~~~g~lDSl~~velv~~lE~~fgi~i~ 57 (80)
T 1dv5_A 1 ADEAIKNGVLDILADLTGSDD---VKKNLDLNLFETGLLDSMGTVQLLLELQSQFGVDAP 57 (80)
T ss_dssp CCHHHHHHHHHHHHHHHTSSS---TTTCSSCCSSTTSSCCSHHHHHHHHHHTTTSCCCCC
T ss_pred CHHHHHHHHHHHHHHHhCCCc---ccCCCCcchhhccCcChHHHHHHHHHHHHHhCCcCC
Confidence 456788888889887653333 247888999877559999999999999999965544
No 22
>2dnw_A Acyl carrier protein; ACP, fatty acid biosynthesis, mitochondria, NADH:ubiquinone oxidereductase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.64 E-value=95 Score=23.42 Aligned_cols=60 Identities=8% Similarity=0.160 Sum_probs=47.6
Q ss_pred CCccchHHHHHHHHHHhhhcCCCCCCCCCeeecchhhhhhhCCCccchHhHHHHHHhccccCC
Q 019902 58 TQQISRYDVTDIINKYVNENKLVHSVKKKRVVSDERLLSLFGKKSFLRIKIYDLLEAHYAENQ 120 (334)
Q Consensus 58 ~~~lsr~~v~k~lw~YIK~nnLqDP~~Kr~IiCDekLk~lFgk~~v~~f~m~klL~~H~~~~~ 120 (334)
.++|++.++...|.+.|.+.--.+| ..|-.|..|..-+|-+++...++...|+.+|--..
T Consensus 8 m~~m~~~~i~~~l~~~l~~~l~~~~---~~i~~d~~l~~dlG~DSL~~vel~~~le~~fgi~i 67 (99)
T 2dnw_A 8 MPPLTLEGIQDRVLYVLKLYDKIDP---EKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEI 67 (99)
T ss_dssp CCCCCHHHHHHHHHHHHHHCTTSCT---TTCCTTCCCCCCCCCCHHHHHHHHHHHHHHTTCCC
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCH---hhCCCCCchhhhcCCCHHHHHHHHHHHHHHHCCCC
Confidence 4679999999999999998632333 35778888855589999999999999999985433
No 23
>1x4t_A Hypothetical protein LOC57905; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: a.2.15.1
Probab=22.57 E-value=1.4e+02 Score=23.71 Aligned_cols=28 Identities=14% Similarity=0.222 Sum_probs=21.6
Q ss_pred CHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHh
Q 019902 257 SEEECEDLRQRVKDGLLKRPTVVELQEKTQILHEDIT 293 (334)
Q Consensus 257 TEeE~~r~~q~~~~~~~krPTv~dl~eKa~~i~~~i~ 293 (334)
+=.||++|+..+.. ||-+|+..||..--
T Consensus 22 ~l~~AekWR~qvik---------EIs~Kv~~Iqn~~L 49 (92)
T 1x4t_A 22 ELPKAEKWRRQIIG---------EISKKVAQIQNAGL 49 (92)
T ss_dssp CHHHHHHHHHHHHH---------HHHHHHHHHHHCCS
T ss_pred CHHHHHHHHHHHHH---------HHHHHHHHhhCCCC
Confidence 46799999998864 78888888887433
Done!