Your job contains 1 sequence.
>019903
MIFSSALLANPPCVCLPRKFPVRCSSLPVSAASQLRSTQFDLKTYWTTLITEIDQNLEKA
ITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLI
HDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRV
IAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS
LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAK
EELDRFKKYGDNVLPLYSFIDYAADREFSVVDSR
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019903
(334 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2121149 - symbol:GGR "geranylgeranyl reductase... 986 2.4e-99 1
TAIR|locus:2115450 - symbol:GGPS1 "geranylgeranyl pyropho... 561 2.6e-54 1
TAIR|locus:2046283 - symbol:AT2G18620 species:3702 "Arabi... 541 3.5e-52 1
UNIPROTKB|P80042 - symbol:GGPS1 "Geranylgeranyl pyrophosp... 534 1.9e-51 1
TAIR|locus:2089626 - symbol:AT3G14530 "AT3G14530" species... 517 1.2e-49 1
TAIR|locus:2093832 - symbol:AT3G29430 species:3702 "Arabi... 513 3.2e-49 1
TAIR|locus:2079028 - symbol:AT3G32040 species:3702 "Arabi... 510 6.7e-49 1
TAIR|locus:2048993 - symbol:GGPS2 "geranylgeranyl pyropho... 493 4.2e-47 1
TAIR|locus:2046258 - symbol:GGPS4 "geranylgeranyl pyropho... 478 1.6e-45 1
TAIR|locus:2087550 - symbol:AT3G20160 species:3702 "Arabi... 476 2.7e-45 1
UNIPROTKB|Q74CA9 - symbol:GSU1765 "Trans-isoprenyl diphos... 464 5.0e-44 1
TIGR_CMR|GSU_1765 - symbol:GSU_1765 "geranyltranstransfer... 464 5.0e-44 1
TAIR|locus:2010182 - symbol:GGPS6 "geranylgeranyl pyropho... 450 1.5e-42 1
UNIPROTKB|Q3AAM7 - symbol:CHY_1988 "Geranyltranstransfera... 411 2.1e-38 1
TIGR_CMR|CHY_1988 - symbol:CHY_1988 "geranyltranstransfer... 411 2.1e-38 1
UNIPROTKB|Q4K5A6 - symbol:ispA "Geranyltranstransferase" ... 391 2.7e-36 1
UNIPROTKB|Q81M53 - symbol:ispA "Geranyltranstransferase" ... 381 3.1e-35 1
TIGR_CMR|BA_4402 - symbol:BA_4402 "geranyltranstransferas... 381 3.1e-35 1
UNIPROTKB|Q0C153 - symbol:ispA "Geranyltranstransferase" ... 337 1.4e-30 1
UNIPROTKB|Q83C74 - symbol:CBU_1255 "Dimethylallyltransfer... 323 4.4e-29 1
TIGR_CMR|CBU_1255 - symbol:CBU_1255 "geranyltranstransfer... 323 4.4e-29 1
UNIPROTKB|P22939 - symbol:ispA "geranyl diphosphate synth... 310 1.0e-27 1
UNIPROTKB|Q5LX41 - symbol:ispA "Farnesyl diphosphate synt... 309 1.3e-27 1
TIGR_CMR|SPO_0248 - symbol:SPO_0248 "farnesyl diphosphate... 309 1.3e-27 1
TIGR_CMR|SO_1526 - symbol:SO_1526 "geranyltranstransferas... 305 3.5e-27 1
UNIPROTKB|Q9KTL2 - symbol:VC_0890 "Geranyltranstransferas... 299 1.5e-26 1
TIGR_CMR|ECH_0455 - symbol:ECH_0455 "putative geranyltran... 299 1.5e-26 1
TIGR_CMR|VC_0890 - symbol:VC_0890 "geranyltranstransferas... 299 1.5e-26 1
TIGR_CMR|CPS_1089 - symbol:CPS_1089 "geranyltranstransfer... 280 1.6e-24 1
UNIPROTKB|Q2GL13 - symbol:ispA "Geranyltranstransferase" ... 268 2.9e-23 1
TIGR_CMR|APH_0329 - symbol:APH_0329 "geranyltranstransfer... 268 2.9e-23 1
UNIPROTKB|Q3IPL1 - symbol:idsA3 "Geranylfarnesyl diphosph... 248 3.9e-21 1
UNIPROTKB|Q2GD75 - symbol:NSE_0694 "Putative geranyltrans... 245 8.0e-21 1
TIGR_CMR|NSE_0694 - symbol:NSE_0694 "putative geranyltran... 245 8.0e-21 1
UNIPROTKB|P0AD57 - symbol:ispB "IspB" species:83333 "Esch... 228 6.0e-19 1
UNIPROTKB|P0A5H8 - symbol:MT3506 "(2E,6E)-farnesyl diphos... 228 2.2e-18 1
UNIPROTKB|Q9UWR6 - symbol:fgs "Geranylfarnesyl diphosphat... 224 5.1e-18 1
TIGR_CMR|CJE_1816 - symbol:CJE_1816 "geranyltranstransfer... 218 5.8e-18 1
UNIPROTKB|O06428 - symbol:grcC1 "Heptaprenyl diphosphate ... 218 1.2e-16 1
UNIPROTKB|O50410 - symbol:idsB "Geranylgeranyl diphosphat... 217 2.2e-16 1
TIGR_CMR|ECH_0088 - symbol:ECH_0088 "octaprenyl-diphospha... 205 6.9e-15 1
UNIPROTKB|Q8PYS1 - symbol:MM_0789 "Geranylfarnesyl diphos... 200 1.3e-14 1
UNIPROTKB|Q5LX97 - symbol:ddsA "Decaprenyl diphosphate sy... 202 2.0e-14 1
TIGR_CMR|SPO_0319 - symbol:SPO_0319 "decaprenyl diphospha... 202 2.0e-14 1
TIGR_CMR|APH_1247 - symbol:APH_1247 "octaprenyl-diphospha... 199 3.6e-14 1
TIGR_CMR|GSU_1317 - symbol:GSU_1317 "octaprenyl-diphospha... 196 9.9e-14 1
UNIPROTKB|Q3ACT5 - symbol:hepT "Heptaprenyl diphosphate s... 196 1.1e-13 1
TIGR_CMR|CHY_1206 - symbol:CHY_1206 "heptaprenyl diphosph... 196 1.1e-13 1
TIGR_CMR|SO_3653 - symbol:SO_3653 "octaprenyl-diphosphate... 194 2.1e-13 1
TIGR_CMR|BA_1535 - symbol:BA_1535 "heptaprenyl diphosphat... 191 4.2e-13 1
TAIR|locus:2202940 - symbol:SPS1 "solanesyl diphosphate s... 188 2.3e-12 1
UNIPROTKB|P31114 - symbol:hepT "Heptaprenyl diphosphate s... 186 2.5e-12 1
TIGR_CMR|CBU_0382 - symbol:CBU_0382 "octylprenyl diphosph... 184 3.6e-12 1
UNIPROTKB|O66129 - symbol:hexs-b "Hexaprenyl-diphosphate ... 182 5.9e-12 1
TIGR_CMR|DET_0389 - symbol:DET_0389 "heptaprenyl diphosph... 174 5.5e-11 1
UNIPROTKB|P55785 - symbol:hepT "Heptaprenyl diphosphate s... 173 6.8e-11 1
UNIPROTKB|Q9KUT1 - symbol:VC_0434 "Octaprenyl-diphosphate... 171 1.6e-10 1
TIGR_CMR|VC_0434 - symbol:VC_0434 "octaprenyl-diphosphate... 171 1.6e-10 1
TAIR|locus:2020362 - symbol:SPS2 "solanesyl diphosphate s... 172 1.9e-10 1
TIGR_CMR|CJE_0645 - symbol:CJE_0645 "polyprenyl synthetas... 168 2.0e-10 1
UNIPROTKB|E1BZW8 - symbol:PDSS1 "Uncharacterized protein"... 170 2.4e-10 1
UNIPROTKB|F1PV51 - symbol:PDSS1 "Uncharacterized protein"... 169 3.1e-10 1
UNIPROTKB|F6RJN8 - symbol:PDSS1 "Uncharacterized protein"... 170 3.3e-10 1
UNIPROTKB|Q5T2R2 - symbol:PDSS1 "Decaprenyl-diphosphate s... 167 7.2e-10 1
TIGR_CMR|NSE_0238 - symbol:NSE_0238 "polyprenyl synthetas... 160 8.1e-10 2
TIGR_CMR|CPS_4513 - symbol:CPS_4513 "octaprenyl-diphospha... 163 1.2e-09 1
MGI|MGI:1889278 - symbol:Pdss1 "prenyl (solanesyl) diphos... 162 2.6e-09 1
UNIPROTKB|F1RTW8 - symbol:PDSS1 "Uncharacterized protein"... 161 3.5e-09 1
ZFIN|ZDB-GENE-030131-4430 - symbol:pdss1 "prenyl (decapre... 159 5.9e-09 1
WB|WBGene00000761 - symbol:coq-1 species:6239 "Caenorhabd... 148 9.9e-08 1
CGD|CAL0005672 - symbol:orf19.7478 species:5476 "Candida ... 107 2.9e-07 2
DICTYBASE|DDB_G0280293 - symbol:coq1 "trans-prenyltransfe... 144 3.7e-07 1
SGD|S000000207 - symbol:COQ1 "Hexaprenyl pyrophosphate sy... 111 1.1e-06 2
FB|FBgn0051005 - symbol:qless "qless" species:7227 "Droso... 133 6.0e-06 1
POMBASE|SPBPJ4664.01 - symbol:dps1 "decaprenyl diphosphat... 131 7.8e-06 1
ASPGD|ASPL0000038406 - symbol:AN10340 species:162425 "Eme... 132 8.4e-06 1
TAIR|locus:2062315 - symbol:GPS1 "geranyl diphosphate syn... 127 2.7e-05 1
GENEDB_PFALCIPARUM|PFB0130w - symbol:PFB0130w "polyprenyl... 115 0.00086 1
UNIPROTKB|O96130 - symbol:OPP "Octaprenyl pyrophosphate s... 115 0.00086 1
>TAIR|locus:2121149 [details] [associations]
symbol:GGR "geranylgeranyl reductase" species:3702
"Arabidopsis thaliana" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0004311 "farnesyltranstransferase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00723 GO:GO:0009507 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 EMBL:AL161593 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 EMBL:AL035540
HOGENOM:HOG000009101 KO:K13789 GO:GO:0051501 EMBL:L40577
EMBL:AY057734 EMBL:AF324662 EMBL:AF326906 EMBL:AF339725
EMBL:AF372915 EMBL:AY086829 IPI:IPI00540165 PIR:T05674
RefSeq:NP_195558.1 UniGene:At.20379 ProteinModelPortal:Q39108
SMR:Q39108 IntAct:Q39108 STRING:Q39108 PaxDb:Q39108 PRIDE:Q39108
EnsemblPlants:AT4G38460.1 GeneID:830002 KEGG:ath:AT4G38460
TAIR:At4g38460 InParanoid:Q39108 OMA:SAMRYAV PhylomeDB:Q39108
ProtClustDB:CLSN2685424 Genevestigator:Q39108 GermOnline:AT4G38460
Uniprot:Q39108
Length = 326
Score = 986 (352.1 bits), Expect = 2.4e-99, P = 2.4e-99
Identities = 208/337 (61%), Positives = 241/337 (71%)
Query: 1 MIFSSALLANPPCVCLPRK---FPVRCSSLPV--SAASQLRSTQFDLKTYWTTLITEIDQ 55
M+FS + + LP K P++ S + S++S S FDL+TYWTTLITEI+Q
Sbjct: 1 MLFSGSAIPLSSFCSLPEKPHTLPMKLSPAAIRSSSSSAPGSLNFDLRTYWTTLITEINQ 60
Query: 56 NLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVH 115
L++AI VK+P IYE+MRYSVLA+G KRAPPVMCVAACELFG +R+AAFPTACALEMVH
Sbjct: 61 KLDEAIPVKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFGGDRLAAFPTACALEMVH 120
Query: 116 AASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEP 175
AASLIHDDLPCMDDDP RRG+PSNHTVYG +AILAGDALFPL FQHIVSHTPP LVP
Sbjct: 121 AASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHIVSHTPPDLVPRA 180
Query: 176 RVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEMSECSAVCGGFLAGADD 235
+LR+I EIAR VGSTGMAAGQ++DLEG P + FVQEKKFG M ECSAVCGG L GA +
Sbjct: 181 TILRLITEIARTVGSTGMAAGQYVDLEGGPFPLSFVQEKKFGAMGECSAVCGGLLGGATE 240
Query: 236 DEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEXXXXXXXSYVAFYGVEKAMXXXXXX 295
DE+QSLRRYGRAVG+LYQVVDDI E K + SY G EK M
Sbjct: 241 DELQSLRRYGRAVGMLYQVVDDITEDKKK-------------SYDG--GAEKGMMEMAEE 285
Query: 296 XXXXXXXXDRF--KKYG--DNVLPLYSFIDYAADREF 328
+ KYG D ++PLY+F+DYAA R F
Sbjct: 286 LKEKAKKELQVFDNKYGGGDTLVPLYTFVDYAAHRHF 322
>TAIR|locus:2115450 [details] [associations]
symbol:GGPS1 "geranylgeranyl pyrophosphate synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;TAS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IDA] [GO:0009513 "etioplast" evidence=IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0019761 "glucosinolate
biosynthetic process" evidence=RCA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
EMBL:AL161590 GO:GO:0016117 EMBL:Z99708 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 EMBL:L25813 IPI:IPI00516537 PIR:F85434
RefSeq:NP_195399.1 UniGene:At.304 ProteinModelPortal:P34802
SMR:P34802 STRING:P34802 PaxDb:P34802 PRIDE:P34802
EnsemblPlants:AT4G36810.1 GeneID:829834 KEGG:ath:AT4G36810
TAIR:At4g36810 InParanoid:P34802 KO:K13789 OMA:MEFAHAV
PhylomeDB:P34802 ProtClustDB:CLSN2915918
BioCyc:ARA:AT4G36810-MONOMER BioCyc:MetaCyc:AT4G36810-MONOMER
BRENDA:2.5.1.29 Genevestigator:P34802 GermOnline:AT4G36810
GO:GO:0009513 GO:GO:0051501 Uniprot:P34802
Length = 371
Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
Identities = 125/318 (39%), Positives = 183/318 (57%)
Query: 25 SSLPVSAASQLRSTQ---FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKG 81
SS V+ LR ++ FD +Y T +++ L+ A+ ++ P +I+E+MRYS+LA G
Sbjct: 56 SSSVVTKEDNLRQSEPSSFDFMSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGG 115
Query: 82 TKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHT 141
KR PV+C+AACEL G A P ACA+EM+H SLIHDDLPCMD+D RRG+P+NH
Sbjct: 116 -KRVRPVLCIAACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHK 174
Query: 142 VYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL 201
V+G D+A+LAGDAL F+H+ S T +V RV+R + E+A+A+G+ G+ AGQ +D+
Sbjct: 175 VFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDI 234
Query: 202 EGEP-NL-------VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQ 253
E +L +EF+ K + E SAV G + G DDEI+ LR++ R +G+L+Q
Sbjct: 235 SSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQ 294
Query: 254 VVDDILEA-KAQTPRDE---EXXXXXXXSYVAFYGVEKAMXXXXXXXXXXXXXXDRFKKY 309
VVDDIL+ K+ + + +Y G+EK+ F
Sbjct: 295 VVDDILDVTKSSKELGKTAGKDLIADKLTYPKIMGLEKSREFAEKLNREARDQLLGFDS- 353
Query: 310 GDNVLPLYSFIDYAADRE 327
D V PL + +Y A R+
Sbjct: 354 -DKVAPLLALANYIAYRQ 370
>TAIR|locus:2046283 [details] [associations]
symbol:AT2G18620 species:3702 "Arabidopsis thaliana"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0016117 EMBL:AC006135 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501 EMBL:DQ446520
EMBL:DQ652999 IPI:IPI00544740 PIR:E84566 RefSeq:NP_179452.1
UniGene:At.52813 ProteinModelPortal:Q9ZU77 SMR:Q9ZU77 STRING:Q9ZU77
EnsemblPlants:AT2G18620.1 GeneID:816377 KEGG:ath:AT2G18620
TAIR:At2g18620 InParanoid:Q9ZU77 OMA:YMIGKAN PhylomeDB:Q9ZU77
Genevestigator:Q9ZU77 Uniprot:Q9ZU77
Length = 347
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 120/317 (37%), Positives = 178/317 (56%)
Query: 27 LPVSAASQ-LRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRA 85
L V+A + + FD +Y +++ L+ A++++ P +I+E++RYS+LA+G KR
Sbjct: 39 LSVTARDEGIIHNHFDFTSYMIGKANAVNEALDSAVSLREPIKIHEAIRYSLLARG-KRV 97
Query: 86 PPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGV 145
PV+C+AACEL G A P ACA+EM+H SLIHDDLPCMD+D RRG+P+NH V+G
Sbjct: 98 RPVLCIAACELVGGEESVALPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGE 157
Query: 146 DIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG-- 203
D+A+LAGDAL F+H+ + T V RV+R I E+A+A+GS G+ AGQ +DL
Sbjct: 158 DVAVLAGDALISFAFEHLATSTA---VSPARVVRAIGELAKAIGSKGLVAGQVVDLTSGG 214
Query: 204 -EPN-----LVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDD 257
+ N ++EF+ K + E + V G + G D+E++ LRR+ R +G+L+QVVDD
Sbjct: 215 MDQNDVGLEVLEFIHVHKTAVLLEAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDD 274
Query: 258 ILEAKAQTPRDEEXXXXXXXSYVA-------FYGVEKAMXXXXXXXXXXXXXXDRFKKYG 310
IL+ T EE +A G+EK+ F
Sbjct: 275 ILDV---TKSSEELGKTAGKDLIADKLTYPKLMGLEKSKDFADKLLSDAHEQLHGFDS-- 329
Query: 311 DNVLPLYSFIDYAADRE 327
V PL + +Y A R+
Sbjct: 330 SRVKPLLALANYIAKRQ 346
>UNIPROTKB|P80042 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase,
chloroplastic" species:4072 "Capsicum annuum" [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0004311
"farnesyltranstransferase activity" evidence=IDA] [GO:0004337
"geranyltranstransferase activity" evidence=IDA] [GO:0006720
"isoprenoid metabolic process" evidence=IDA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 GO:GO:0009507 GO:GO:0009536 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386
GO:GO:0006720 EMBL:X80267 PIR:S53722 ProteinModelPortal:P80042
SMR:P80042 BioCyc:MetaCyc:MONOMER-12171 Uniprot:P80042
Length = 369
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 119/301 (39%), Positives = 173/301 (57%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
F+ K Y T +++ L++AI VK P I+E+MRYS+LA G KR P++C+AACEL G
Sbjct: 76 FNFKIYVTEKAISVNKALDEAIIVKEPHVIHEAMRYSLLAGG-KRVRPMLCLAACELVGG 134
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
N+ A ACA+EM+H SLIHDDLPCMD+D RRG+P+NH +YG D+A+LAGD+L
Sbjct: 135 NQENAMAAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDSLLAFA 194
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLE--GEPNL----VEFVQE 213
F+HIV+ T + P R++ +AE+A+++G+ G+ AGQ D++ G ++ +EF+
Sbjct: 195 FEHIVNSTAG-VTPS-RIVGAVAELAKSIGTEGLVAGQVADIKCTGNASVSLETLEFIHV 252
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEXXX 273
K + E S V G L G + E++ LRR+ R +G+L+QVVDDIL+ T EE
Sbjct: 253 HKTAALLESSVVLGAILGGGTNVEVEKLRRFARCIGLLFQVVDDILDV---TKSSEELGK 309
Query: 274 XXX-------XSYVAFYGVEKAMXXXXXXXXXXXXXXDRFKKYGDNVLPLYSFIDYAADR 326
+Y G+EKA + F PL + DY A R
Sbjct: 310 TAGKDLVVDKTTYPKLLGLEKAKEFAAELNREAKQQLEGFDSR--KAAPLIALADYIAYR 367
Query: 327 E 327
+
Sbjct: 368 D 368
>TAIR|locus:2089626 [details] [associations]
symbol:AT3G14530 "AT3G14530" species:3702 "Arabidopsis
thaliana" [GO:0004311 "farnesyltranstransferase activity"
evidence=ISS] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 EMBL:AB023038 KO:K13789 GO:GO:0051501
EMBL:BT010463 IPI:IPI00517639 RefSeq:NP_188071.1 UniGene:At.48659
ProteinModelPortal:Q9LUE1 SMR:Q9LUE1 STRING:Q9LUE1
EnsemblPlants:AT3G14530.1 GeneID:820678 KEGG:ath:AT3G14530
TAIR:At3g14530 InParanoid:Q9LUE1 PhylomeDB:Q9LUE1
ProtClustDB:CLSN2682670 Genevestigator:Q9LUE1 Uniprot:Q9LUE1
Length = 360
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 104/237 (43%), Positives = 152/237 (64%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
++ FD K Y ++ L+ ++ + P I E++RYS+LA G KR P++C+AACEL
Sbjct: 61 NSAFDFKLYMIRKAESVNAALDVSVPLLKPLTIQEAVRYSLLAGG-KRVRPLLCIAACEL 119
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
G + A ACA+EM+H +SLIHDDLPCMD+ RRG+P+NH VYG D+A+LAGDAL
Sbjct: 120 VGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALL 179
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE---PNLV----- 208
L F+H+ + + PE +++R + E+ARA+G+TG+ AGQ +DL E P+ V
Sbjct: 180 ALAFEHMTVVSSGLVAPE-KMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHL 238
Query: 209 EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT 265
EF+ K + E +AV G + G + EI+ LR+Y R +G+L+QVVDDIL+ T
Sbjct: 239 EFIHLHKTAALLEAAAVLGVIMGGGTEQEIEKLRKYARCIGLLFQVVDDILDVTKST 295
>TAIR|locus:2093832 [details] [associations]
symbol:AT3G29430 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=RCA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
EMBL:AP001309 GO:GO:0016117 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2682670 EMBL:DQ056612 IPI:IPI00540813
RefSeq:NP_189589.1 UniGene:At.53571 ProteinModelPortal:Q9LIA0
SMR:Q9LIA0 STRING:Q9LIA0 EnsemblPlants:AT3G29430.1 GeneID:822604
KEGG:ath:AT3G29430 TAIR:At3g29430 InParanoid:Q9LIA0 OMA:NDRNSAF
PhylomeDB:Q9LIA0 Genevestigator:Q9LIA0 Uniprot:Q9LIA0
Length = 357
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 105/247 (42%), Positives = 155/247 (62%)
Query: 27 LPVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAP 86
+P S R++ FD K+Y + L ++ ++ P I E++RYS+LA G KR
Sbjct: 48 IPPEGKSNDRNSAFDFKSYMIRKAESVSAALNVSVPLQEPLTIQEAVRYSLLAGG-KRVR 106
Query: 87 PVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVD 146
P++C+AACEL G + A ACA+EM+H +SLIHDDLPCMDD RRG+P+NH +G D
Sbjct: 107 PLLCIAACELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKEFGED 166
Query: 147 IAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EG- 203
+A+LAGDAL L F+H+ + + PE R++R + E+A+A+G+ G+ AGQ DL +G
Sbjct: 167 MAVLAGDALLALAFEHMTFVSNGLVAPE-RMIRAVMELAKAIGTKGLVAGQVTDLCSQGL 225
Query: 204 EPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDI 258
P+ V EF+ K + E +AV G + G ++EI+ LR+Y R +G+L+QVVDDI
Sbjct: 226 NPDDVGLERLEFIHLHKTAALLEAAAVLGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDI 285
Query: 259 LEAKAQT 265
L+ T
Sbjct: 286 LDVTEST 292
>TAIR|locus:2079028 [details] [associations]
symbol:AT3G32040 species:3702 "Arabidopsis thaliana"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0016117 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2682670 EMBL:AP002033 EMBL:BT015110
EMBL:AK221451 IPI:IPI00544436 RefSeq:NP_189747.1 UniGene:At.50761
ProteinModelPortal:Q9LHR4 SMR:Q9LHR4 STRING:Q9LHR4 PRIDE:Q9LHR4
EnsemblPlants:AT3G32040.1 GeneID:822957 KEGG:ath:AT3G32040
TAIR:At3g32040 InParanoid:Q9LHR4 PhylomeDB:Q9LHR4
Genevestigator:Q9LHR4 Uniprot:Q9LHR4
Length = 360
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 105/247 (42%), Positives = 153/247 (61%)
Query: 27 LPVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAP 86
+P S R+ FD K+Y + L ++ + P I E++RYS+LA G KR
Sbjct: 51 IPPKGKSNDRNFAFDFKSYMIRKAESVSMALNVSVPPQDPLAIQEAVRYSLLAGG-KRVR 109
Query: 87 PVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVD 146
P++C+AACEL G + A ACA+EM+H +SLIHDDLPCMDD RRG+P+NH V+G
Sbjct: 110 PLLCIAACELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEH 169
Query: 147 IAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EG- 203
+A+LAGDAL L F+H+ + + PE R++R + E+A+A+G+ G+ AGQ DL +G
Sbjct: 170 MAVLAGDALLALAFEHMTVVSSGLVAPE-RMIRSVTELAKAIGTKGLVAGQVSDLCSQGL 228
Query: 204 EP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDI 258
P +EF+ K + E +AV G + G ++EIQ LR+YGR +G+L+QVVDDI
Sbjct: 229 NPYDVGLERLEFIHLHKTAALLEAAAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDI 288
Query: 259 LEAKAQT 265
++ T
Sbjct: 289 IDVTEST 295
>TAIR|locus:2048993 [details] [associations]
symbol:GGPS2 "geranylgeranyl pyrophosphate synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;TAS] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0006744 "ubiquinone biosynthetic
process" evidence=RCA] [GO:0004311 "farnesyltranstransferase
activity" evidence=IGI;IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005783 GO:GO:0005739
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0016117 EMBL:AC004482 eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501 EMBL:U44876
EMBL:BT005328 EMBL:AK117954 EMBL:AY087521 EMBL:D85029
IPI:IPI00535829 PIR:S71230 PIR:T02429 RefSeq:NP_179960.1
UniGene:At.1550 ProteinModelPortal:O04046 SMR:O04046 STRING:O04046
PaxDb:O04046 PRIDE:O04046 EnsemblPlants:AT2G23800.1 GeneID:816912
KEGG:ath:AT2G23800 TAIR:At2g23800 InParanoid:O04046 OMA:QSMKTGA
PhylomeDB:O04046 ProtClustDB:CLSN2912871
BioCyc:ARA:AT2G23800-MONOMER BioCyc:MetaCyc:AT2G23800-MONOMER
Genevestigator:O04046 GermOnline:AT2G23800 Uniprot:O04046
Length = 376
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 113/299 (37%), Positives = 171/299 (57%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
F+ Y + +++ LE+AI V P +I+E+MRY++LA G KR P++C+A+CEL G
Sbjct: 83 FEFDPYMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAG-KRVRPILCLASCELVGG 141
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
AA P ACA+EM+H SLI DDLPCMD+D RRG+P+ H VYG +AIL+G AL L
Sbjct: 142 QENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLA 201
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EG----EPNL--VEFV 211
F+H+ T + E R++ + E+AR++G+ G+ AGQ +D+ EG E L +EF+
Sbjct: 202 FEHM---TTAEISSE-RMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFI 257
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL-EAKAQTPRDE- 269
K + E +AV G + G D+EI+S+R++ R +G+L+QVVDDIL E K+ +
Sbjct: 258 HVHKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKT 317
Query: 270 --EXXXXXXXSYVAFYGVEKAMXXXXXXXXXXXXXXDRFKKYGDNVLPLYSFIDYAADR 326
+ +Y G+EK+ F + V PL + + A+R
Sbjct: 318 AGKDQLAGKLTYPKLIGLEKSKEFVKRLTKDARQHLQGFSS--EKVAPLVALTTFIANR 374
>TAIR|locus:2046258 [details] [associations]
symbol:GGPS4 "geranylgeranyl pyrophosphate synthase 4"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;ISS;TAS] [GO:0004311
"farnesyltranstransferase activity" evidence=IGI;IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005783 GO:GO:0005739
GO:GO:0009536 EMBL:CP002685 GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
EMBL:AC006135 EMBL:AC005724 eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2912871 EMBL:DQ446521 EMBL:L22347
IPI:IPI00546039 PIR:G84566 RefSeq:NP_179454.1 UniGene:At.66219
ProteinModelPortal:Q9SLG2 SMR:Q9SLG2 STRING:Q9SLG2
EnsemblPlants:AT2G18640.1 GeneID:816379 KEGG:ath:AT2G18640
TAIR:At2g18640 InParanoid:Q9SLG2 OMA:DIHANKT PhylomeDB:Q9SLG2
BioCyc:ARA:AT2G18640-MONOMER BioCyc:MetaCyc:AT2G18640-MONOMER
Genevestigator:Q9SLG2 Uniprot:Q9SLG2
Length = 372
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 112/299 (37%), Positives = 166/299 (55%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
FD K Y + I++ L++AI + P I+++MRY++LA G KR P++C+AACEL G
Sbjct: 79 FDFKPYMISKAETINRALDEAIPLIEPLNIHKAMRYAILAGG-KRVRPILCLAACELVGG 137
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A ACA+EM+H SLI DDLPCMD+D RRG+P+ H V+G +AIL+G AL L
Sbjct: 138 EERLAIQAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALA 197
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EG-EPNLV-----EFV 211
F+H+ V +++R + E+A+++G+ G+ AGQ DL EG E N V E++
Sbjct: 198 FEHLTEAD----VSSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYI 253
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL-EAKAQTPRDE- 269
K G + E SAV G + G + EI+ +R + R +G+L+QVVDDIL E K+ +
Sbjct: 254 HVHKTGSLLEASAVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDETKSSEELGKT 313
Query: 270 --EXXXXXXXSYVAFYGVEKAMXXXXXXXXXXXXXXDRFKKYGDNVLPLYSFIDYAADR 326
+ +Y GVEK+ F D V PL + ++ A+R
Sbjct: 314 AGKDKVAGKLTYPKVIGVEKSKEFVEKLKRDAREHLQGFDS--DKVKPLIALTNFIANR 370
>TAIR|locus:2087550 [details] [associations]
symbol:AT3G20160 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;ISS] [GO:0006744 "ubiquinone
biosynthetic process" evidence=RCA] [GO:0004311
"farnesyltranstransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009536 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 EMBL:AP000383 GO:GO:0016117 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501
ProtClustDB:CLSN2913613 EMBL:DQ446678 EMBL:DQ653096 IPI:IPI00537582
RefSeq:NP_188651.1 UniGene:At.53400 ProteinModelPortal:Q9LJY2
SMR:Q9LJY2 STRING:Q9LJY2 EnsemblPlants:AT3G20160.1 GeneID:821560
KEGG:ath:AT3G20160 TAIR:At3g20160 InParanoid:Q9LJY2 OMA:RSYARCI
PhylomeDB:Q9LJY2 Genevestigator:Q9LJY2 Uniprot:Q9LJY2
Length = 344
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 120/317 (37%), Positives = 171/317 (53%)
Query: 28 PVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPE-QIYESMRYSVLAKGTKRAP 86
P+++A+ S F +Y +++ LE+A+ ++ PE +I E+MRY++L+ G KR
Sbjct: 39 PLTSAA---SYDFKFMSYMVNKAKSVNKALEEAVPLREPELKIREAMRYTLLSDG-KRVR 94
Query: 87 PVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVD 146
P++C+AACEL G A ACA+EM+HA+SLI DDLPCMD+D RRG+P+NH V+G
Sbjct: 95 PMLCLAACELVGGQESTAMSAACAIEMLHASSLILDDLPCMDNDSLRRGKPTNHIVFGES 154
Query: 147 IAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE-- 204
IAILA AL L Q S T + PE R+L+ + E+ +AV G+ AGQ DL GE
Sbjct: 155 IAILASQALIALAVQKTTSSTFADVPPE-RILKTVQEMVKAV--EGLVAGQQADLAGEGM 211
Query: 205 -----PNL--VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDD 257
L +EF+ K + E +AV G + G D+EI+ LR Y R +G+++QVVDD
Sbjct: 212 RFDSDTGLEHLEFIHIHKTAALLEAAAVMGAIMGGGSDEEIERLRSYARCIGLMFQVVDD 271
Query: 258 ILEAKAQTPRDEEXXXXXXXSYVA-------FYGVEKAMXXXXXXXXXXXXXXDRFKKYG 310
+L+ T EE +A GVEK+ F
Sbjct: 272 VLDV---TKSSEELGKTAGKDLIAGKLTYPRLMGVEKSKEYAERLNIEAREHLLGFDI-- 326
Query: 311 DNVLPLYSFIDYAADRE 327
D V PL S DY +R+
Sbjct: 327 DKVAPLVSLADYIVNRQ 343
>UNIPROTKB|Q74CA9 [details] [associations]
symbol:GSU1765 "Trans-isoprenyl diphosphate synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004337 KO:K13789
RefSeq:NP_952815.1 ProteinModelPortal:Q74CA9 GeneID:2685235
KEGG:gsu:GSU1765 PATRIC:22026373 OMA:RRGNPTN ProtClustDB:CLSK828537
BioCyc:GSUL243231:GH27-1760-MONOMER Uniprot:Q74CA9
Length = 297
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 100/233 (42%), Positives = 139/233 (59%)
Query: 41 DLKTYWTTLITEIDQNLEKAITVK--YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
DLK Y +D+ LE+ + + P ++ +MRYSV A G KR P++ +AAC+ G
Sbjct: 2 DLKGYLKERCALVDEALERHLPAEDELPSSVHRAMRYSVFAGG-KRVRPILMLAACDAVG 60
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
+ A P ACA+EM+H SLIHDDLP MDDD RRG+P+NH V+G IAILAGDAL
Sbjct: 61 GDTALALPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDALLTE 120
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN------LVEFVQ 212
F I S + V R+L VI EIA GS GM GQ +D+E E N V+++
Sbjct: 121 AFILISSPSYAAAVGSDRLLPVIHEIALCAGSRGMVGGQVVDMESEGNKEIDLATVQYIH 180
Query: 213 EKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT 265
+K G + + S G L GA+ D ++++ RYG A+G+ +Q+ DDIL+ + T
Sbjct: 181 TRKTGALIKASIKAGAVLGGANADAVKAVTRYGEAIGLAFQIADDILDIEGTT 233
>TIGR_CMR|GSU_1765 [details] [associations]
symbol:GSU_1765 "geranyltranstransferase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 KO:K13789 RefSeq:NP_952815.1
ProteinModelPortal:Q74CA9 GeneID:2685235 KEGG:gsu:GSU1765
PATRIC:22026373 OMA:RRGNPTN ProtClustDB:CLSK828537
BioCyc:GSUL243231:GH27-1760-MONOMER Uniprot:Q74CA9
Length = 297
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 100/233 (42%), Positives = 139/233 (59%)
Query: 41 DLKTYWTTLITEIDQNLEKAITVK--YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
DLK Y +D+ LE+ + + P ++ +MRYSV A G KR P++ +AAC+ G
Sbjct: 2 DLKGYLKERCALVDEALERHLPAEDELPSSVHRAMRYSVFAGG-KRVRPILMLAACDAVG 60
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
+ A P ACA+EM+H SLIHDDLP MDDD RRG+P+NH V+G IAILAGDAL
Sbjct: 61 GDTALALPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDALLTE 120
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN------LVEFVQ 212
F I S + V R+L VI EIA GS GM GQ +D+E E N V+++
Sbjct: 121 AFILISSPSYAAAVGSDRLLPVIHEIALCAGSRGMVGGQVVDMESEGNKEIDLATVQYIH 180
Query: 213 EKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT 265
+K G + + S G L GA+ D ++++ RYG A+G+ +Q+ DDIL+ + T
Sbjct: 181 TRKTGALIKASIKAGAVLGGANADAVKAVTRYGEAIGLAFQIADDILDIEGTT 233
>TAIR|locus:2010182 [details] [associations]
symbol:GGPS6 "geranylgeranyl pyrophosphate synthase 6"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;ISS;TAS] [GO:0006744 "ubiquinone biosynthetic process"
evidence=RCA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IGI;IDA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 GO:GO:0009536 GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
EMBL:AC007504 eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 EMBL:AB000835 EMBL:BT011230 EMBL:BT012158
IPI:IPI00537288 RefSeq:NP_175376.1 UniGene:At.38214
UniGene:At.49962 ProteinModelPortal:O22043 SMR:O22043 STRING:O22043
EnsemblPlants:AT1G49530.1 GeneID:841377 KEGG:ath:AT1G49530
TAIR:At1g49530 InParanoid:O22043 OMA:LCLVACE PhylomeDB:O22043
ProtClustDB:CLSN2913613 Genevestigator:O22043 GermOnline:AT1G49530
Uniprot:O22043
Length = 336
Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
Identities = 105/274 (38%), Positives = 150/274 (54%)
Query: 68 QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCM 127
+++++MRY++L G KR P++C+ ACEL G A P ACA+EM+HAASLI DDLPCM
Sbjct: 66 EVHKAMRYTLLPGG-KRVRPMLCLVACELVGGQESTAMPAACAVEMIHAASLILDDLPCM 124
Query: 128 DDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARA 187
DDD RRG+P+NH V+G +ILA +AL L + ++ T + E RVLR + E+ARA
Sbjct: 125 DDDSLRRGKPTNHKVFGEKTSILASNALRSLAVKQTLASTSLGVTSE-RVLRAVQEMARA 183
Query: 188 VGSTGMAAGQFLDLEGEP----------NLVEFVQEKKFGEMSECSAVCGGFLAGADDDE 237
VG+ G+ AGQ DL GE +E + K + E +AV G + G D+E
Sbjct: 184 VGTEGLVAGQAADLAGERMSFKNEDDELRYLELMHVHKTAVLVEAAAVVGAIMGGGSDEE 243
Query: 238 IQSLRRYGRAVGVLYQVVDDIL-EAKAQTPRDE---EXXXXXXXSYVAFYGVEKAMXXXX 293
I+ L+ Y R VG+++QV+DD+L E K+ + + +Y GV+ A
Sbjct: 244 IERLKSYARCVGLMFQVMDDVLDETKSSEELGKTAGKDLITGKLTYPKVMGVDNAREYAK 303
Query: 294 XXXXXXXXXXDRFKKYGDNVLPLYSFIDYAADRE 327
F D V+PL S DY R+
Sbjct: 304 RLNREAQEHLQGFDS--DKVVPLLSLADYIVKRQ 335
>UNIPROTKB|Q3AAM7 [details] [associations]
symbol:CHY_1988 "Geranyltranstransferase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K13789 OMA:NITEECI RefSeq:YP_360807.1
ProteinModelPortal:Q3AAM7 STRING:Q3AAM7 GeneID:3727552
KEGG:chy:CHY_1988 PATRIC:21277063
BioCyc:CHYD246194:GJCN-1987-MONOMER Uniprot:Q3AAM7
Length = 295
Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 94/233 (40%), Positives = 138/233 (59%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
YP I+++M YS+ A G KR PV+ +AA E G+ P A +E +H SLIHDDL
Sbjct: 28 YPPVIHQAMNYSLKAGG-KRLRPVLMLAAGEWSGIAPEKLLPAAVGVECLHTYSLIHDDL 86
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MD+D RRG+P+NH V+G IAILAGDAL F+ + + T +P RV+RVI E+
Sbjct: 87 PAMDNDDFRRGKPTNHKVFGEAIAILAGDALLTKAFE-LTAKTLEQGIPAERVVRVIQEL 145
Query: 185 ARAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A A GS G+ AGQ +DL +P ++ ++ K + S + GG LAGA ++EI+
Sbjct: 146 AVASGSEGLIAGQVVDLSSSEAKKDPEVLLYIHLNKTARLIRYSLIAGGILAGATEEEIK 205
Query: 240 SLRRYGRAVGVLYQVVDDILEA-----KAQTPRDEEXXXXXXXSYVAFYGVEK 287
+L YGR +G+ +Q+VDD+L+ K P + +YV+ +G+E+
Sbjct: 206 ALDDYGRHLGLAFQIVDDLLDVVGDFQKIGKPVGSDEKNQKL-TYVSLFGIEE 257
>TIGR_CMR|CHY_1988 [details] [associations]
symbol:CHY_1988 "geranyltranstransferase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K13789 OMA:NITEECI RefSeq:YP_360807.1
ProteinModelPortal:Q3AAM7 STRING:Q3AAM7 GeneID:3727552
KEGG:chy:CHY_1988 PATRIC:21277063
BioCyc:CHYD246194:GJCN-1987-MONOMER Uniprot:Q3AAM7
Length = 295
Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 94/233 (40%), Positives = 138/233 (59%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
YP I+++M YS+ A G KR PV+ +AA E G+ P A +E +H SLIHDDL
Sbjct: 28 YPPVIHQAMNYSLKAGG-KRLRPVLMLAAGEWSGIAPEKLLPAAVGVECLHTYSLIHDDL 86
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MD+D RRG+P+NH V+G IAILAGDAL F+ + + T +P RV+RVI E+
Sbjct: 87 PAMDNDDFRRGKPTNHKVFGEAIAILAGDALLTKAFE-LTAKTLEQGIPAERVVRVIQEL 145
Query: 185 ARAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A A GS G+ AGQ +DL +P ++ ++ K + S + GG LAGA ++EI+
Sbjct: 146 AVASGSEGLIAGQVVDLSSSEAKKDPEVLLYIHLNKTARLIRYSLIAGGILAGATEEEIK 205
Query: 240 SLRRYGRAVGVLYQVVDDILEA-----KAQTPRDEEXXXXXXXSYVAFYGVEK 287
+L YGR +G+ +Q+VDD+L+ K P + +YV+ +G+E+
Sbjct: 206 ALDDYGRHLGLAFQIVDDLLDVVGDFQKIGKPVGSDEKNQKL-TYVSLFGIEE 257
>UNIPROTKB|Q4K5A6 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:220664
"Pseudomonas protegens Pf-5" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000076
GenomeReviews:CP000076_GR eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337
KO:K13789 OMA:DLISEHK RefSeq:YP_262577.1 PDB:3LJI PDB:3LSN PDB:3P41
PDBsum:3LJI PDBsum:3LSN PDBsum:3P41 ProteinModelPortal:Q4K5A6
STRING:Q4K5A6 DNASU:3479897 GeneID:3479897 KEGG:pfl:PFL_5509
PATRIC:19880507 ProtClustDB:CLSK868404
BioCyc:PFLU220664:GIX8-5546-MONOMER EvolutionaryTrace:Q4K5A6
Uniprot:Q4K5A6
Length = 295
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 87/232 (37%), Positives = 129/232 (55%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPE--QIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
+ Y + +D + T PE ++YE+MRYSV+ G KR P++ AACE G
Sbjct: 2 ITAYQASSQARVDAAMHTLFTAPSPELARLYEAMRYSVM-NGGKRVRPLLAYAACEALGG 60
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A ACA+E++HA SL+HDDLP MDDD RRGQP+ H + AILAGD L L
Sbjct: 61 KPEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLA 120
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG-----EPNLVEFVQEK 214
F ++ E R LR++ +A+A G GM GQ +DL + +E++
Sbjct: 121 FSALLDPALSDASAEIR-LRMVTTLAQAAGPAGMVGGQAIDLGSVGLKLDQQALEYMHRH 179
Query: 215 KFGEMSECSAVCGGFLAG-ADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT 265
K G + E S + G +G A+ E+++L+ Y +A+G+ +QV DDIL+ ++ T
Sbjct: 180 KTGALIEASVILGALASGRAEKGELKALQTYAQAIGLAFQVQDDILDVESDT 231
>UNIPROTKB|Q81M53 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:1392
"Bacillus anthracis" [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K13789
RefSeq:NP_846630.1 RefSeq:YP_021045.1 RefSeq:YP_030332.1
ProteinModelPortal:Q81M53 DNASU:1087728
EnsemblBacteria:EBBACT00000008555 EnsemblBacteria:EBBACT00000017694
EnsemblBacteria:EBBACT00000019296 GeneID:1087728 GeneID:2819990
GeneID:2851738 KEGG:ban:BA_4402 KEGG:bar:GBAA_4402 KEGG:bat:BAS4082
OMA:FACAVEM ProtClustDB:CLSK917292
BioCyc:BANT260799:GJAJ-4139-MONOMER
BioCyc:BANT261594:GJ7F-4282-MONOMER Uniprot:Q81M53
Length = 296
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 80/218 (36%), Positives = 129/218 (59%)
Query: 51 TEIDQNLEK-AITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTAC 109
T +++ L A ++ P + E+M YS+ A G KR P++ A + F R AC
Sbjct: 14 TFVEEKLVSYANELQCPNVLREAMAYSLEAGG-KRLRPLLLFATLQAFDKERNLGVGAAC 72
Query: 110 ALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPP 169
ALEM+H SL+HDDLPCMDDD RRG+P+NH V+G +A+LAGD L FQ I+++
Sbjct: 73 ALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQK 132
Query: 170 HLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSA 224
+ E +V R++ E+A+A G GM GQ D+E E + E++ + K G++ E +
Sbjct: 133 EISAEKKV-RLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAV 191
Query: 225 VCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAK 262
+ G L+ A +++ + L + + +G+ +Q+ DDIL+ +
Sbjct: 192 LAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVE 229
>TIGR_CMR|BA_4402 [details] [associations]
symbol:BA_4402 "geranyltranstransferase" species:198094
"Bacillus anthracis str. Ames" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K13789
RefSeq:NP_846630.1 RefSeq:YP_021045.1 RefSeq:YP_030332.1
ProteinModelPortal:Q81M53 DNASU:1087728
EnsemblBacteria:EBBACT00000008555 EnsemblBacteria:EBBACT00000017694
EnsemblBacteria:EBBACT00000019296 GeneID:1087728 GeneID:2819990
GeneID:2851738 KEGG:ban:BA_4402 KEGG:bar:GBAA_4402 KEGG:bat:BAS4082
OMA:FACAVEM ProtClustDB:CLSK917292
BioCyc:BANT260799:GJAJ-4139-MONOMER
BioCyc:BANT261594:GJ7F-4282-MONOMER Uniprot:Q81M53
Length = 296
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 80/218 (36%), Positives = 129/218 (59%)
Query: 51 TEIDQNLEK-AITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTAC 109
T +++ L A ++ P + E+M YS+ A G KR P++ A + F R AC
Sbjct: 14 TFVEEKLVSYANELQCPNVLREAMAYSLEAGG-KRLRPLLLFATLQAFDKERNLGVGAAC 72
Query: 110 ALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPP 169
ALEM+H SL+HDDLPCMDDD RRG+P+NH V+G +A+LAGD L FQ I+++
Sbjct: 73 ALEMIHTYSLVHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQK 132
Query: 170 HLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSA 224
+ E +V R++ E+A+A G GM GQ D+E E + E++ + K G++ E +
Sbjct: 133 EISAEKKV-RLVLELAKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAV 191
Query: 225 VCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAK 262
+ G L+ A +++ + L + + +G+ +Q+ DDIL+ +
Sbjct: 192 LAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVE 229
>UNIPROTKB|Q0C153 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:228405
"Hyphomonas neptunium ATCC 15444" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000158
GenomeReviews:CP000158_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K00795 RefSeq:YP_760540.1
ProteinModelPortal:Q0C153 STRING:Q0C153 GeneID:4289927
KEGG:hne:HNE_1839 PATRIC:32216509 OMA:ICKDISK
ProtClustDB:CLSK2780959 BioCyc:HNEP228405:GI69-1865-MONOMER
Uniprot:Q0C153
Length = 295
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 79/203 (38%), Positives = 114/203 (56%)
Query: 66 PE-QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
PE + +MR++ LA G KR P + +FG + + TA ALE +H SL+HDDL
Sbjct: 29 PEANLMRAMRHAALANG-KRMRPFFVLETGAMFGASEKSLLRTAAALECIHCYSLVHDDL 87
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
PCMDDD RRGQP+ H + A+LAGDAL L F+ I++ + H P RVL +I +
Sbjct: 88 PCMDDDDFRRGQPTVHKAFDEATAVLAGDALLTLAFK-ILASSETHDDPAVRVL-LIERL 145
Query: 185 ARAVGSTGMAAGQFLDL--EGEP---NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A A G+ GM GQ +D+ E P N + +Q K G + + GG + A + E
Sbjct: 146 ADAAGARGMVGGQMIDMLEEESPRDLNTITRMQRLKTGALISYALEAGGIIGHAREAERN 205
Query: 240 SLRRYGRAVGVLYQVVDDILEAK 262
+L + +G+ YQ+ DDIL+A+
Sbjct: 206 ALAGFANDLGLAYQIADDILDAE 228
>UNIPROTKB|Q83C74 [details] [associations]
symbol:CBU_1255 "Dimethylallyltransferase" species:227377
"Coxiella burnetii RSA 493" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
KO:K00795 RefSeq:NP_820249.1 ProteinModelPortal:Q83C74
GeneID:1209160 KEGG:cbu:CBU_1255 PATRIC:17931243 OMA:MACAVEC
ProtClustDB:CLSK914646 BioCyc:CBUR227377:GJ7S-1240-MONOMER
Uniprot:Q83C74
Length = 267
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 85/230 (36%), Positives = 121/230 (52%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P++++E+M Y+V++ G KR P+ A F V+ ACA+E++H SL+HDDLP
Sbjct: 26 PQRLHEAMTYAVMSGG-KRIRPLFTYATGFSFEVDPAQIDNAACAIELMHCYSLVHDDLP 84
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
MDDD RRG+PS H + AIL GDAL L F+ ++ + +R+I +A
Sbjct: 85 AMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFE---------VLARDKNIRLINVLA 135
Query: 186 RAVGSTGMAAGQFLDLE-----GEPNLVEFVQEKKFGEMSECSAVCGGFLAGA-DDDEIQ 239
A GS GMA GQ LDLE P +E V K G + + G AG D+ +Q
Sbjct: 136 NACGSLGMAGGQQLDLEFKNKEATPEQIEIVHRLKTGALFSTAIELGALAAGCLDEKRLQ 195
Query: 240 SLRRYGRAVGVLYQVVDDILEAKAQTPRDEEXXXXXXXSYVAFYGVEKAM 289
LR+ G VG+++Q DD+ + QT DE+ V F VEK +
Sbjct: 196 KLRKLGATVGLIFQWQDDLAD---QTVEDEKIPLINRIG-VLFNQVEKLL 241
>TIGR_CMR|CBU_1255 [details] [associations]
symbol:CBU_1255 "geranyltranstransferase, putative"
species:227377 "Coxiella burnetii RSA 493" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0045337
"farnesyl diphosphate biosynthetic process" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016828
GenomeReviews:AE016828_GR InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337
GO:GO:0045337 KO:K00795 RefSeq:NP_820249.1
ProteinModelPortal:Q83C74 GeneID:1209160 KEGG:cbu:CBU_1255
PATRIC:17931243 OMA:MACAVEC ProtClustDB:CLSK914646
BioCyc:CBUR227377:GJ7S-1240-MONOMER Uniprot:Q83C74
Length = 267
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 85/230 (36%), Positives = 121/230 (52%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P++++E+M Y+V++ G KR P+ A F V+ ACA+E++H SL+HDDLP
Sbjct: 26 PQRLHEAMTYAVMSGG-KRIRPLFTYATGFSFEVDPAQIDNAACAIELMHCYSLVHDDLP 84
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
MDDD RRG+PS H + AIL GDAL L F+ ++ + +R+I +A
Sbjct: 85 AMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFE---------VLARDKNIRLINVLA 135
Query: 186 RAVGSTGMAAGQFLDLE-----GEPNLVEFVQEKKFGEMSECSAVCGGFLAGA-DDDEIQ 239
A GS GMA GQ LDLE P +E V K G + + G AG D+ +Q
Sbjct: 136 NACGSLGMAGGQQLDLEFKNKEATPEQIEIVHRLKTGALFSTAIELGALAAGCLDEKRLQ 195
Query: 240 SLRRYGRAVGVLYQVVDDILEAKAQTPRDEEXXXXXXXSYVAFYGVEKAM 289
LR+ G VG+++Q DD+ + QT DE+ V F VEK +
Sbjct: 196 KLRKLGATVGLIFQWQDDLAD---QTVEDEKIPLINRIG-VLFNQVEKLL 241
>UNIPROTKB|P22939 [details] [associations]
symbol:ispA "geranyl diphosphate synthase / farnesyl
diphosphate synthase" species:83333 "Escherichia coli K-12"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0033384 "geranyl
diphosphate biosynthetic process" evidence=IMP] [GO:0004337
"geranyltranstransferase activity" evidence=IEA;IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005737 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
EMBL:U82664 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 EMBL:D00694 PIR:JQ0665 RefSeq:NP_414955.1
RefSeq:YP_488713.1 PDB:1RQI PDB:1RQJ PDBsum:1RQI PDBsum:1RQJ
ProteinModelPortal:P22939 SMR:P22939 DIP:DIP-10044N IntAct:P22939
MINT:MINT-1233182 SWISS-2DPAGE:P22939 PRIDE:P22939
EnsemblBacteria:EBESCT00000002132 EnsemblBacteria:EBESCT00000015988
GeneID:12930843 GeneID:945064 KEGG:ecj:Y75_p0409 KEGG:eco:b0421
PATRIC:32115991 EchoBASE:EB0503 EcoGene:EG10508 KO:K00795
OMA:NITEECI ProtClustDB:PRK10581 BioCyc:EcoCyc:FPPSYN-MONOMER
BioCyc:ECOL316407:JW0411-MONOMER BioCyc:MetaCyc:FPPSYN-MONOMER
BRENDA:2.5.1.1 SABIO-RK:P22939 ChEMBL:CHEMBL1075078
EvolutionaryTrace:P22939 Genevestigator:P22939 Uniprot:P22939
Length = 299
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 83/230 (36%), Positives = 115/230 (50%)
Query: 69 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMD 128
+ E+M+Y L G KR P + A +FGV+ A A+E +HA SLIHDDLP MD
Sbjct: 32 VVETMQYGALLGG-KRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMD 90
Query: 129 DDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAV 188
DD RRG P+ H +G AILAGDAL L F + P + R+ +I+E+A A
Sbjct: 91 DDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRI-SMISELASAS 149
Query: 189 GSTGMAAGQFLDLEGE----P-NLVEFVQEKKFGEMSECSAVCGGFLAGADDDE-IQSLR 242
G GM GQ LDL+ E P + +E + K G + + G AG + L
Sbjct: 150 GIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLD 209
Query: 243 RYGRAVGVLYQVVDDILEAKAQTP----RDEEXXXXXXXSYVAFYGVEKA 288
+Y ++G+ +QV DDIL+ T R +Y A G+E+A
Sbjct: 210 KYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQA 259
>UNIPROTKB|Q5LX41 [details] [associations]
symbol:ispA "Farnesyl diphosphate synthase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K00795
RefSeq:YP_165512.1 ProteinModelPortal:Q5LX41 GeneID:3196371
KEGG:sil:SPO0248 PATRIC:23373747 OMA:ANTETHG
ProtClustDB:CLSK2767208 Uniprot:Q5LX41
Length = 288
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 83/248 (33%), Positives = 128/248 (51%)
Query: 53 IDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALE 112
I ++ + + P I +M ++ +G KR + + + L V+ A A A+E
Sbjct: 13 IQRSFDTVLGALEPLDITRAMAWTT--EGGKRLRGFLVLESARLHDVDEARAIWPATAIE 70
Query: 113 MVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHL- 171
+HA SL+HDDLPCMDDD RRG+P+ H + A+LAGDAL L F+ T P +
Sbjct: 71 ALHAYSLVHDDLPCMDDDDLRRGRPTAHVKWDEGTAVLAGDALHSLAFELC---TRPEVG 127
Query: 172 VPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE--P-----NLVEFVQEKKFGEMSECSA 224
E R + +A+A G+ GM GQ LD+ E P + + +Q K G + E +A
Sbjct: 128 TAETRATLALT-LAQAAGARGMVLGQALDIAAETAPKPLTLDQITRLQAGKTGALIEWAA 186
Query: 225 VCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP----RDEEXXXXXXXSYV 280
G LAGAD D LR+Y RA+G+ +Q+ DDIL+ + R ++ ++V
Sbjct: 187 AAGAVLAGADPDP---LRQYARALGLAFQIADDILDVEGDAEKAGKRLQKDAGAGKATFV 243
Query: 281 AFYGVEKA 288
+ G++ A
Sbjct: 244 SLLGLDAA 251
>TIGR_CMR|SPO_0248 [details] [associations]
symbol:SPO_0248 "farnesyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0045337
"farnesyl diphosphate biosynthetic process" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K00795
RefSeq:YP_165512.1 ProteinModelPortal:Q5LX41 GeneID:3196371
KEGG:sil:SPO0248 PATRIC:23373747 OMA:ANTETHG
ProtClustDB:CLSK2767208 Uniprot:Q5LX41
Length = 288
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 83/248 (33%), Positives = 128/248 (51%)
Query: 53 IDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALE 112
I ++ + + P I +M ++ +G KR + + + L V+ A A A+E
Sbjct: 13 IQRSFDTVLGALEPLDITRAMAWTT--EGGKRLRGFLVLESARLHDVDEARAIWPATAIE 70
Query: 113 MVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHL- 171
+HA SL+HDDLPCMDDD RRG+P+ H + A+LAGDAL L F+ T P +
Sbjct: 71 ALHAYSLVHDDLPCMDDDDLRRGRPTAHVKWDEGTAVLAGDALHSLAFELC---TRPEVG 127
Query: 172 VPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE--P-----NLVEFVQEKKFGEMSECSA 224
E R + +A+A G+ GM GQ LD+ E P + + +Q K G + E +A
Sbjct: 128 TAETRATLALT-LAQAAGARGMVLGQALDIAAETAPKPLTLDQITRLQAGKTGALIEWAA 186
Query: 225 VCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP----RDEEXXXXXXXSYV 280
G LAGAD D LR+Y RA+G+ +Q+ DDIL+ + R ++ ++V
Sbjct: 187 AAGAVLAGADPDP---LRQYARALGLAFQIADDILDVEGDAEKAGKRLQKDAGAGKATFV 243
Query: 281 AFYGVEKA 288
+ G++ A
Sbjct: 244 SLLGLDAA 251
>TIGR_CMR|SO_1526 [details] [associations]
symbol:SO_1526 "geranyltranstransferase" species:211586
"Shewanella oneidensis MR-1" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337
OMA:MEFAHAV KO:K00795 RefSeq:NP_717143.1 ProteinModelPortal:Q8EGR8
GeneID:1169335 KEGG:son:SO_1526 PATRIC:23522694
ProtClustDB:CLSK906310 Uniprot:Q8EGR8
Length = 293
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 76/203 (37%), Positives = 106/203 (52%)
Query: 68 QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCM 127
Q+ +M + L G KR P + + ++FGV A A+E +HA SLIHDDLP M
Sbjct: 30 QLKAAMTHGALLGG-KRIRPFLVYSVGQMFGVPLEKLDACAAAIECIHAYSLIHDDLPAM 88
Query: 128 DDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARA 187
DDD RRGQP+ H + AILAGDAL L F+ IV+ P + E + V A +A+A
Sbjct: 89 DDDALRRGQPTVHIAFDEATAILAGDALQTLAFE-IVTEAVPGITSEQHIAMVRA-LAKA 146
Query: 188 VGSTGMAAGQFLDLEGEPNLVEF-----VQEKKFGEMSECSAVCGGFLAGADDDEIQSLR 242
G GM GQ +DL ++ + K G + C+ A A D+ Q++
Sbjct: 147 SGYRGMCGGQAIDLASTDKHIDLKALTQLHNMKTGALISCAVELALIAANAPKDQYQTMM 206
Query: 243 RYGRAVGVLYQVVDDILEAKAQT 265
+ AVG+ +QV DDIL+ A T
Sbjct: 207 EFAHAVGLAFQVQDDILDIIATT 229
>UNIPROTKB|Q9KTL2 [details] [associations]
symbol:VC_0890 "Geranyltranstransferase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004337 KO:K00795 OMA:DLISEHK PIR:A82267
RefSeq:NP_230537.1 PDB:3P8R PDBsum:3P8R ProteinModelPortal:Q9KTL2
SMR:Q9KTL2 DNASU:2614119 GeneID:2614119 KEGG:vch:VC0890
PATRIC:20080878 ProtClustDB:CLSK874144 Uniprot:Q9KTL2
Length = 294
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 88/258 (34%), Positives = 124/258 (48%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNR 101
L +Y ++DQ L + P + E+MRY +L G KRA P + ++ G
Sbjct: 5 LSSYQQRNNQQLDQWLNRIPFQTLP--LIEAMRYGLLLGG-KRARPYLVYITGQMLGCEL 61
Query: 102 IAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQ 161
A A+E +HA SLIHDDLP MDDD RRG+P+ H + AIL GDAL L F
Sbjct: 62 SDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFT 121
Query: 162 HIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKF 216
I++ E + + ++ +A A G+ GM GQ LDL E L+ E + K
Sbjct: 122 -ILAEGDLSAAGETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKT 180
Query: 217 GEMSECSAVCGGFLAGADDDE-IQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEE 270
G + C+ G AG + L RY AVG+ +QV DDIL+ + T P+ +
Sbjct: 181 GALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSD 240
Query: 271 XXXXXXXSYVAFYGVEKA 288
+Y A G+E A
Sbjct: 241 QELNKS-TYPALLGLEGA 257
>TIGR_CMR|ECH_0455 [details] [associations]
symbol:ECH_0455 "putative geranyltranstransferase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0016740 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K00795 OMA:ICKDISK RefSeq:YP_507273.1
ProteinModelPortal:Q2GH10 STRING:Q2GH10 GeneID:3926960
KEGG:ech:ECH_0455 PATRIC:20576384 ProtClustDB:CLSK749162
BioCyc:ECHA205920:GJNR-456-MONOMER Uniprot:Q2GH10
Length = 267
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 76/212 (35%), Positives = 114/212 (53%)
Query: 55 QNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMV 114
+ LE + + + SMRYS+ A G K P + A+ ++F VN P + A+E++
Sbjct: 10 KQLESILPENNQDILLTSMRYSMFAPG-KHIRPFLVNASAQIFNVNVDRILPVSAAVEII 68
Query: 115 HAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPE 174
H SLIHDDLP +D++ RRGQ S+H + IAIL GDAL L F+ I+S + E
Sbjct: 69 HVYSLIHDDLPGIDNENIRRGQASSHKKFNEAIAILTGDALLTLAFE-ILS-----TIDE 122
Query: 175 PRVLR--VIAEIARAVGSTGMAAGQFLDLEG---EPNLVEFVQEKKFGEMSECSAVCGGF 229
+R +I +A+A+G GM GQ LD E + N ++ + K + + GG
Sbjct: 123 SPFIRCCMIKALAKALGYQGMIQGQILDTETIAKDTNDIQAIHVLKTAQFFSVACELGGI 182
Query: 230 LAGADDDEIQSLRRYGRAVGVLYQVVDDILEA 261
L A + E+ +L YG +G +QV DDI +A
Sbjct: 183 LGNASNIELNALANYGLNLGHAFQVKDDIADA 214
>TIGR_CMR|VC_0890 [details] [associations]
symbol:VC_0890 "geranyltranstransferase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004337 KO:K00795 OMA:DLISEHK PIR:A82267
RefSeq:NP_230537.1 PDB:3P8R PDBsum:3P8R ProteinModelPortal:Q9KTL2
SMR:Q9KTL2 DNASU:2614119 GeneID:2614119 KEGG:vch:VC0890
PATRIC:20080878 ProtClustDB:CLSK874144 Uniprot:Q9KTL2
Length = 294
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 88/258 (34%), Positives = 124/258 (48%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNR 101
L +Y ++DQ L + P + E+MRY +L G KRA P + ++ G
Sbjct: 5 LSSYQQRNNQQLDQWLNRIPFQTLP--LIEAMRYGLLLGG-KRARPYLVYITGQMLGCEL 61
Query: 102 IAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQ 161
A A+E +HA SLIHDDLP MDDD RRG+P+ H + AIL GDAL L F
Sbjct: 62 SDLDTPASAVECIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFT 121
Query: 162 HIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKF 216
I++ E + + ++ +A A G+ GM GQ LDL E L+ E + K
Sbjct: 122 -ILAEGDLSAAGETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKT 180
Query: 217 GEMSECSAVCGGFLAGADDDE-IQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEE 270
G + C+ G AG + L RY AVG+ +QV DDIL+ + T P+ +
Sbjct: 181 GALMRCAIRLGALAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSD 240
Query: 271 XXXXXXXSYVAFYGVEKA 288
+Y A G+E A
Sbjct: 241 QELNKS-TYPALLGLEGA 257
>TIGR_CMR|CPS_1089 [details] [associations]
symbol:CPS_1089 "geranyltranstransferase" species:167879
"Colwellia psychrerythraea 34H" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K00795 RefSeq:YP_267833.1
ProteinModelPortal:Q487D2 STRING:Q487D2 GeneID:3518499
KEGG:cps:CPS_1089 PATRIC:21465449 OMA:KTCTEIC
BioCyc:CPSY167879:GI48-1171-MONOMER Uniprot:Q487D2
Length = 300
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 78/221 (35%), Positives = 112/221 (50%)
Query: 59 KAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAAS 118
+ +T+ P+ I E+MRY +L G KR P + E + A ALE +HA S
Sbjct: 23 EGLTINDPKLI-EAMRYGLLIGG-KRMRPYLAYITGEAVSADLNDIDAVAGALECIHAYS 80
Query: 119 LIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHT---PPHLVPEP 175
L+HDDLP MDDD RRG+P+ H + AILAGDAL L F + +HT P
Sbjct: 81 LLHDDLPAMDDDDLRRGKPTCHKAFDEATAILAGDALQTLAFDILANHTFSMNQSTAGMP 140
Query: 176 RVLRVIAEIARAVGSTGMAAGQFLDLEGE-PNL----VEFVQEKKFGEMSECSAVCGGFL 230
+++I ++ +A G GM GQ LDL N+ +E + K G + E S +
Sbjct: 141 IQVKLIQQLVKASGYQGMCGGQALDLAATGKNISLGELEVLHSLKTGALLEASVLMPAMC 200
Query: 231 AGADDDEIQS-LRRYGRAVGVLYQVVDDILEAKAQTPRDEE 270
+G E + L Y + +G+ YQV DDI++ T +EE
Sbjct: 201 SGQVTREYKIILSEYAQLIGLAYQVQDDIIDL---TSTEEE 238
>UNIPROTKB|Q2GL13 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:212042
"Anaplasma phagocytophilum HZ" [GO:0008299 "isoprenoid biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000235 GenomeReviews:CP000235_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 OMA:DIHANKT KO:K00795
RefSeq:YP_504938.1 ProteinModelPortal:Q2GL13 STRING:Q2GL13
GeneID:3930764 KEGG:aph:APH_0329 PATRIC:20949240
ProtClustDB:CLSK747370 BioCyc:APHA212042:GHPM-359-MONOMER
Uniprot:Q2GL13
Length = 280
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 70/212 (33%), Positives = 109/212 (51%)
Query: 52 EIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACAL 111
E+ + +E +T + +++ Y +L G K + + + FGV+ P A+
Sbjct: 20 ELTKLIETQVTGGPAAGLVDAIGYCILPPG-KCLRAFLASSVAQTFGVSIERTLPLCLAI 78
Query: 112 EMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHL 171
E++H+ SL+HDDLP MD+ P+RRG+ S H +G +A+L GDAL L F+ ++S
Sbjct: 79 EVLHSYSLVHDDLPSMDNAPTRRGKNSCHIEHGEALALLTGDALLTLTFE-LLSSMDESC 137
Query: 172 VPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG-EPNLVEFVQEKKFGEMSECSAVC--GG 228
+ ++RVI++ A G GM AGQ LD+ EP+L Q K SA C G
Sbjct: 138 TVKCAIIRVISD---ACGHRGMVAGQALDMGNLEPSLEAVKQIHKLKTARLFSAACESGA 194
Query: 229 FLAGADDDEIQSLRRYGRAVGVLYQVVDDILE 260
LA Q+L YG +G +Q DD+ +
Sbjct: 195 ILAEVSTANQQALASYGETLGCAFQAKDDLCD 226
>TIGR_CMR|APH_0329 [details] [associations]
symbol:APH_0329 "geranyltranstransferase" species:212042
"Anaplasma phagocytophilum HZ" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0008299 "isoprenoid biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000235 GenomeReviews:CP000235_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 OMA:DIHANKT KO:K00795
RefSeq:YP_504938.1 ProteinModelPortal:Q2GL13 STRING:Q2GL13
GeneID:3930764 KEGG:aph:APH_0329 PATRIC:20949240
ProtClustDB:CLSK747370 BioCyc:APHA212042:GHPM-359-MONOMER
Uniprot:Q2GL13
Length = 280
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 70/212 (33%), Positives = 109/212 (51%)
Query: 52 EIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACAL 111
E+ + +E +T + +++ Y +L G K + + + FGV+ P A+
Sbjct: 20 ELTKLIETQVTGGPAAGLVDAIGYCILPPG-KCLRAFLASSVAQTFGVSIERTLPLCLAI 78
Query: 112 EMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHL 171
E++H+ SL+HDDLP MD+ P+RRG+ S H +G +A+L GDAL L F+ ++S
Sbjct: 79 EVLHSYSLVHDDLPSMDNAPTRRGKNSCHIEHGEALALLTGDALLTLTFE-LLSSMDESC 137
Query: 172 VPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG-EPNLVEFVQEKKFGEMSECSAVC--GG 228
+ ++RVI++ A G GM AGQ LD+ EP+L Q K SA C G
Sbjct: 138 TVKCAIIRVISD---ACGHRGMVAGQALDMGNLEPSLEAVKQIHKLKTARLFSAACESGA 194
Query: 229 FLAGADDDEIQSLRRYGRAVGVLYQVVDDILE 260
LA Q+L YG +G +Q DD+ +
Sbjct: 195 ILAEVSTANQQALASYGETLGCAFQAKDDLCD 226
>UNIPROTKB|Q3IPL1 [details] [associations]
symbol:idsA3 "Geranylfarnesyl diphosphate synthase"
species:348780 "Natronomonas pharaonis DSM 2160" [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005737
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004659 HOGENOM:HOG000009101 KO:K13787 GO:GO:0044687
EMBL:CR936257 RefSeq:YP_327492.1 ProteinModelPortal:Q3IPL1
STRING:Q3IPL1 PRIDE:Q3IPL1 GeneID:3702862 GenomeReviews:CR936257_GR
KEGG:nph:NP3696A OMA:DIMDNDD ProtClustDB:CLSK511327
BioCyc:NPHA348780:GJX0-1875-MONOMER Uniprot:Q3IPL1
Length = 341
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 71/238 (29%), Positives = 125/238 (52%)
Query: 53 IDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAA----FPT- 107
+++ + + + V+ PE++Y + RY + A G + P ++ +AA L V ++A FP+
Sbjct: 18 VNEAVSEQLPVQKPERLYSASRYLLDAGGKRLRPTILLLAAESLADVEPLSADYRQFPSL 77
Query: 108 ----------ACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
A ++E++ + +LIHDD+ MDDD RRG P+ H Y ++ AILAGD L+
Sbjct: 78 PGDEVDVLSAAVSIEVIQSFTLIHDDI--MDDDDLRRGVPAVHREYDLETAILAGDTLYS 135
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN----LVEFVQ- 212
F++++ P R + + E+A T + GQ LD++ E E+++
Sbjct: 136 KAFEYMLDTG----APAERSVEALDELATTC--TEICEGQALDVDFENRSDVTTEEYLEM 189
Query: 213 -EKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
E K + +A L G+DD+ +++L YG +G +Q+ DD+L+ A P DE
Sbjct: 190 VEFKTAVLYAAAASIPAILLGSDDETVEALHGYGLDIGRAFQIQDDLLDLTA--PSDE 245
>UNIPROTKB|Q2GD75 [details] [associations]
symbol:NSE_0694 "Putative geranyltranstransferase"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
GO:GO:0003824 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0016740 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K00795 RefSeq:YP_506571.1
ProteinModelPortal:Q2GD75 STRING:Q2GD75 GeneID:3931424
KEGG:nse:NSE_0694 PATRIC:22681407 OMA:LAESSHI
ProtClustDB:CLSK2527634 BioCyc:NSEN222891:GHFU-707-MONOMER
Uniprot:Q2GD75
Length = 256
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 65/215 (30%), Positives = 112/215 (52%)
Query: 53 IDQNLEKAITVKYP--EQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACA 110
I + L++ +++ +P +++++++RYS+LA+ + + + LF + + A A
Sbjct: 14 IRETLKENLSL-FPSEDKLFQAIRYSLLAESS-HIRGFLVLELGTLFNIPYVDTIEVAAA 71
Query: 111 LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPH 170
+EM+H+ SLIHDDLP +D+ RR QP+ H + AILAGDAL L +Q + + P
Sbjct: 72 IEMIHSFSLIHDDLPALDNSDERRNQPACHIAFQESTAILAGDALLVLAYQMLSRYGTP- 130
Query: 171 LVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-EFVQEKKFGEMSECSAVCGGF 229
LV + + E M GQ D+ G L + + + K G + S G
Sbjct: 131 LVQ--CTSKYVLE---------MITGQVHDVIGSSTLTADEINKMKSGSLFALSCSSVGH 179
Query: 230 LAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQ 264
LA + E+ L +G +G+++Q VDDI + A+
Sbjct: 180 LANSGQSELTVLEAFGYEIGIIFQAVDDIKDGDAK 214
>TIGR_CMR|NSE_0694 [details] [associations]
symbol:NSE_0694 "putative geranyltranstransferase"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
GO:GO:0003824 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0016740 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K00795 RefSeq:YP_506571.1
ProteinModelPortal:Q2GD75 STRING:Q2GD75 GeneID:3931424
KEGG:nse:NSE_0694 PATRIC:22681407 OMA:LAESSHI
ProtClustDB:CLSK2527634 BioCyc:NSEN222891:GHFU-707-MONOMER
Uniprot:Q2GD75
Length = 256
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 65/215 (30%), Positives = 112/215 (52%)
Query: 53 IDQNLEKAITVKYP--EQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACA 110
I + L++ +++ +P +++++++RYS+LA+ + + + LF + + A A
Sbjct: 14 IRETLKENLSL-FPSEDKLFQAIRYSLLAESS-HIRGFLVLELGTLFNIPYVDTIEVAAA 71
Query: 111 LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPH 170
+EM+H+ SLIHDDLP +D+ RR QP+ H + AILAGDAL L +Q + + P
Sbjct: 72 IEMIHSFSLIHDDLPALDNSDERRNQPACHIAFQESTAILAGDALLVLAYQMLSRYGTP- 130
Query: 171 LVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-EFVQEKKFGEMSECSAVCGGF 229
LV + + E M GQ D+ G L + + + K G + S G
Sbjct: 131 LVQ--CTSKYVLE---------MITGQVHDVIGSSTLTADEINKMKSGSLFALSCSSVGH 179
Query: 230 LAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQ 264
LA + E+ L +G +G+++Q VDDI + A+
Sbjct: 180 LANSGQSELTVLEAFGYEIGIIFQAVDDIKDGDAK 214
>UNIPROTKB|P0AD57 [details] [associations]
symbol:ispB "IspB" species:83333 "Escherichia coli K-12"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016094
"polyprenol biosynthetic process" evidence=IMP] [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
EMBL:U18997 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0016094 GO:GO:0004659 KO:K02523 EMBL:D13267 EMBL:X68873
PIR:E65109 RefSeq:NP_417654.1 RefSeq:YP_491372.1
ProteinModelPortal:P0AD57 SMR:P0AD57 IntAct:P0AD57 PRIDE:P0AD57
EnsemblBacteria:EBESCT00000004959 EnsemblBacteria:EBESCT00000017333
GeneID:12932117 GeneID:947364 KEGG:ecj:Y75_p3107 KEGG:eco:b3187
PATRIC:32121794 EchoBASE:EB0017 EcoGene:EG10017
HOGENOM:HOG000009102 OMA:YITSAGG ProtClustDB:PRK10888
BioCyc:EcoCyc:OPPSYN-MONOMER BioCyc:ECOL316407:JW3154-MONOMER
BioCyc:MetaCyc:OPPSYN-MONOMER Genevestigator:P0AD57 Uniprot:P0AD57
Length = 323
Score = 228 (85.3 bits), Expect = 6.0e-19, P = 6.0e-19
Identities = 59/202 (29%), Positives = 102/202 (50%)
Query: 68 QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCM 127
Q+ + Y +++ G KR P++ V A G A A +E +H A+L+HDD+ +
Sbjct: 30 QLINQLGYYIVSGGGKRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDV--V 87
Query: 128 DDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARA 187
D+ RRG+ + + +G ++L GD ++ FQ + S + +VL V++E
Sbjct: 88 DESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTS------LGSLKVLEVMSEAVNV 141
Query: 188 VGSTGMAAGQFLDLEG--EPNLVEF----VQEKKFGEMSECSAVCGGFLAGADDDEIQSL 241
+ A G+ L L +P++ E V K + E +A C G LAG +E + L
Sbjct: 142 I-----AEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGL 196
Query: 242 RRYGRAVGVLYQVVDDILEAKA 263
+ YGR +G +Q++DD+L+ A
Sbjct: 197 QDYGRYLGTAFQLIDDLLDYNA 218
>UNIPROTKB|P0A5H8 [details] [associations]
symbol:MT3506 "(2E,6E)-farnesyl diphosphate synthase"
species:1773 "Mycobacterium tuberculosis" [GO:0000287 "magnesium
ion binding" evidence=IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005506
"iron ion binding" evidence=IDA] [GO:0030145 "manganese ion
binding" evidence=IDA] [GO:0033384 "geranyl diphosphate
biosynthetic process" evidence=IDA] [GO:0033386 "geranylgeranyl
diphosphate biosynthetic process" evidence=IDA] [GO:0040007
"growth" evidence=IMP] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00766 GO:GO:0005737
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000287 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0005506 GO:GO:0016126
GO:GO:0030145 EMBL:BX842582 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 PIR:C70735 RefSeq:NP_338029.1
RefSeq:YP_006516883.1 RefSeq:YP_177970.1 ProteinModelPortal:P0A5H8
SMR:P0A5H8 EnsemblBacteria:EBMYCT00000003545
EnsemblBacteria:EBMYCT00000069473 GeneID:13317001 GeneID:887919
GeneID:926589 KEGG:mtc:MT3506 KEGG:mtu:Rv3398c KEGG:mtv:RVBD_3398c
PATRIC:18129451 TubercuList:Rv3398c HOGENOM:HOG000009101 KO:K13787
OMA:RMAPLES ProtClustDB:CLSK799990 BioCyc:MetaCyc:MONOMER-15280
GO:GO:0004161 GO:GO:0004337 GO:GO:0045337 GO:GO:0033384
GO:GO:0033386 Uniprot:P0A5H8
Length = 359
Score = 228 (85.3 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 62/179 (34%), Positives = 94/179 (52%)
Query: 83 KRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTV 142
K P + A E G + +A P A ++E+VH SL+HDDL MD D RR +P+ +
Sbjct: 73 KAIRPALVFVAAEAAGADPHSAIPGAVSVELVHNFSLVHDDL--MDRDEHRRHRPTVWAL 130
Query: 143 YGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLE 202
+G +A+LAGDA+ L + ++ PH+ LR I+E R + G AA +
Sbjct: 131 WGDAMALLAGDAMLSLAHEVLLDCDSPHV---GAALRAISEATREL-IRGQAADTAFESR 186
Query: 203 GEPNLVEFVQ--EKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL 259
+ L E ++ E K + SA G LAGA ++L YGR +G+ +Q+VDD+L
Sbjct: 187 TDVALDECLKMAEGKTAALMAASAEVGALLAGAPRSVREALVAYGRHIGLAFQLVDDLL 245
>UNIPROTKB|Q9UWR6 [details] [associations]
symbol:fgs "Geranylfarnesyl diphosphate synthase"
species:56636 "Aeropyrum pernix" [GO:0004659 "prenyltransferase
activity" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004659 EMBL:AB025791
ProteinModelPortal:Q9UWR6 BioCyc:MetaCyc:MONOMER-15678
BRENDA:2.5.1.B1 GO:GO:0044687 Uniprot:Q9UWR6
Length = 318
Score = 224 (83.9 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 63/199 (31%), Positives = 98/199 (49%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIA-AFPTACALEMVHAASLIHDDL 124
P+++ + + + A G + P + + A L G+ A A P A ++E H SLIHDD+
Sbjct: 15 PDRLSGASLHLIKAGGKRLRPLITLLTARMLGGLEAEARAIPLAASIETAHTFSLIHDDI 74
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEP--RVLRVIA 182
MD D RRG P+ H VYG D AILAGD L F+ I + E R +V++
Sbjct: 75 --MDRDEVRRGVPTTHVVYGDDWAILAGDTLHAAAFKMIADSREWGMSHEQAYRAFKVLS 132
Query: 183 EIARAVGSTGMAAGQFLDLEGEPNLVEFVQ--EKKFGEMSECSAVCGGFLAGADDDEIQS 240
E A + S G A + + ++ +++ K G + E +A G AGA + +
Sbjct: 133 EAAIQI-SRGQAYDMLFEETWDVDVADYLNMVRLKTGALIEAAARIGAVAAGAGSEIEKM 191
Query: 241 LRRYGRAVGVLYQVVDDIL 259
+ G G+ +Q+ DDIL
Sbjct: 192 MGEVGMNAGIAFQIRDDIL 210
>TIGR_CMR|CJE_1816 [details] [associations]
symbol:CJE_1816 "geranyltranstransferase" species:195099
"Campylobacter jejuni RM1221" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0008299 "isoprenoid biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000025
GenomeReviews:CP000025_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K00795 OMA:DLISEHK RefSeq:YP_179786.1 PDB:3NPK
PDBsum:3NPK ProteinModelPortal:Q5HSE9 STRING:Q5HSE9 GeneID:3232443
KEGG:cjr:CJE1816 PATRIC:20045454 ProtClustDB:CLSK872468
BioCyc:CJEJ195099:GJC0-1850-MONOMER Uniprot:Q5HSE9
Length = 281
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 61/193 (31%), Positives = 95/193 (49%)
Query: 104 AFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHI 163
A A ALE +H SLIHDDLP MD+ RRG P+ H Y AIL GDAL F +
Sbjct: 60 ALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTLHKSYDETTAILVGDALNTEAFL-V 118
Query: 164 VSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGE 218
+SH HL E ++ ++I +A G GM GQ +D E N +EF+ K
Sbjct: 119 LSHA--HLKDEIKI-KLIKTLAFNAGLNGMVIGQAIDCFFEDKRLSLNELEFLHTHKTAR 175
Query: 219 MSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEXXXXXXX- 277
+ + G + +++E + + G +G+++Q+ DDI++ + +
Sbjct: 176 LIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQINDDIIDVTTSQEQSGKPTNNDIHK 235
Query: 278 -SYVAFYGVEKAM 289
S+V G+E+A+
Sbjct: 236 NSFVNLLGLEQAI 248
>UNIPROTKB|O06428 [details] [associations]
symbol:grcC1 "Heptaprenyl diphosphate synthase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 GO:GO:0005886 GO:GO:0040007 GO:GO:0005618
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
EMBL:BX842573 HOGENOM:HOG000009104 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K00805 EMBL:CP003248 PIR:E70549
RefSeq:NP_215076.1 RefSeq:NP_334997.1 RefSeq:YP_006513895.1
SMR:O06428 EnsemblBacteria:EBMYCT00000001031
EnsemblBacteria:EBMYCT00000071419 GeneID:13318436 GeneID:887647
GeneID:924969 KEGG:mtc:MT0588 KEGG:mtu:Rv0562 KEGG:mtv:RVBD_0562
PATRIC:18122992 TubercuList:Rv0562 OMA:SIKAMNV
ProtClustDB:CLSK790596 Uniprot:O06428
Length = 335
Score = 218 (81.8 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 63/219 (28%), Positives = 110/219 (50%)
Query: 50 ITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTAC 109
+ ++Q ++ + + +++ + G KR P+ V + ++ AA A
Sbjct: 26 VARVEQLMDTEL--RQADEVMSDSLLHLFNAGGKRFRPLFTVLSAQIGPQPDAAAVTVAG 83
Query: 110 A-LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTP 168
A +EM+H A+L HDD+ MD+ RRG PS + +G ++AILAGD L S
Sbjct: 84 AVIEMIHLATLYHDDV--MDEAQVRRGAPSANAQWGNNVAILAGDYLLATA-----SRLV 136
Query: 169 PHLVPEPRVLRVIAE-IARAV-GSTGMAAGQFLDLEGEPNLVEFVQEKKFGEMSECSAVC 226
L PE +R+IA+ A+ V G G +++ ++ VQEK G + +
Sbjct: 137 ARLGPE--AVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKT-GSLIGAAGRL 193
Query: 227 GGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT 265
GG +GA D++++ L R G VG +Q+ DDI++ +++
Sbjct: 194 GGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSES 232
>UNIPROTKB|O50410 [details] [associations]
symbol:idsB "Geranylgeranyl diphosphate synthase, type I"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 GO:GO:0005829 GenomeReviews:AL123456_GR
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
EMBL:BX842582 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K13787 EMBL:CP003248 PIR:F70973
RefSeq:NP_217900.1 RefSeq:YP_006516867.1 ProteinModelPortal:O50410
SMR:O50410 EnsemblBacteria:EBMYCT00000000229 GeneID:13316985
GeneID:887680 KEGG:mtu:Rv3383c KEGG:mtv:RVBD_3383c PATRIC:18156138
TubercuList:Rv3383c OMA:DLISEHK ProtClustDB:CLSK792459
Uniprot:O50410
Length = 350
Score = 217 (81.4 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 55/162 (33%), Positives = 89/162 (54%)
Query: 104 AFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHI 163
A P + A+E+VH +L+HDD+ MD D +RRG+P+ +V+GV +AIL GDAL + +
Sbjct: 91 ATPVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWSVWGVGVAILLGDALHATAVRIL 148
Query: 164 VSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLD--LEGEPNLV--EFVQEK--KFG 217
L E +R I + + + GQF D LEG+P + ++++ K
Sbjct: 149 TG-----LTDECVAVRAIRRLQ--MSCLDLCIGQFEDCLLEGQPEVTVDDYLRMAAGKTA 201
Query: 218 EMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL 259
++ C G +A ADD I +L R+G +G+ +Q VDD++
Sbjct: 202 ALTGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLI 243
>TIGR_CMR|ECH_0088 [details] [associations]
symbol:ECH_0088 "octaprenyl-diphosphate synthase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0016740 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 OMA:QQFPELH
KO:K02523 HOGENOM:HOG000009102 RefSeq:YP_506918.1
ProteinModelPortal:Q2GI15 STRING:Q2GI15 GeneID:3927493
KEGG:ech:ECH_0088 PATRIC:20575731 ProtClustDB:CLSK749549
BioCyc:ECHA205920:GJNR-88-MONOMER Uniprot:Q2GI15
Length = 325
Score = 205 (77.2 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 64/235 (27%), Positives = 121/235 (51%)
Query: 34 QLRS-TQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVA 92
QL+S Q DL + +LI + QN K IT+ I E +++ ++ G KR P++
Sbjct: 11 QLKSLVQQDLDSM-ESLI--LHQN-NKHITL-----ITEIVQH-LIKSGGKRIRPIIFFI 60
Query: 93 ACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAG 152
C++ N P A A+E++H A+L+HDD+ +D+ RRG+ +++ ++G +IL G
Sbjct: 61 ICKMLNCNNENKVPIAAAIELIHNATLLHDDV--IDESELRRGEKTSNVIWGNKASILVG 118
Query: 153 DALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIAR--AVGSTG-MAAGQFLDLEGEPNLVE 209
D L + FQ ++ +L ++++ ++ VG M + +++ E +E
Sbjct: 119 DFLLAISFQWLIK------CKNLNILSILSQASKDVIVGEVQQMISSHNINISKE-KYIE 171
Query: 210 FVQEKKFGEMSE-CSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA 263
+ K S C + LA ++E ++L+ +G G+ +Q++DDIL+ A
Sbjct: 172 IISAKTAALFSATCESAAN--LAQTSNEEKEALKNFGNNFGISFQIMDDILDYTA 224
>UNIPROTKB|Q8PYS1 [details] [associations]
symbol:MM_0789 "Geranylfarnesyl diphosphate synthase"
species:192952 "Methanosarcina mazei Go1" [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 EMBL:AE008384 GenomeReviews:AE008384_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004659 GO:GO:0044687 RefSeq:NP_632813.1 PDB:3IPI PDBsum:3IPI
ProteinModelPortal:Q8PYS1 DNASU:1479131 GeneID:1479131
KEGG:mma:MM_0789 HOGENOM:HOG000224637 KO:K02523 OMA:IAYQIVD
ProtClustDB:CLSK782700 EvolutionaryTrace:Q8PYS1 Uniprot:Q8PYS1
Length = 295
Score = 200 (75.5 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 63/214 (29%), Positives = 103/214 (48%)
Query: 53 IDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALE 112
++ ++++IT+ + + + + V G KR P++ + E+ + + A A+E
Sbjct: 22 VEAGIKESITLIEDPGLKKMVEH-VCHSGGKRIRPIILLLVSEICSGSYSRSLNAALAVE 80
Query: 113 MVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLV 172
M+H+ASLIHDDL +D RR PS +G A+L GD L I
Sbjct: 81 MMHSASLIHDDL--LDQGLVRRNLPSAPEKFGPSGALLCGDYLIAKSIAFI--------- 129
Query: 173 PEPRVLRVIAEIARAVGSTGMAAGQFLDLE------GEPNLVEFVQEKKFGEMSECSAVC 226
P +VI + +A MA G+ LDL+ GE + + + KK + SA
Sbjct: 130 -SPYGEKVIQDFGKA--GMDMAEGEVLDLKLEDESFGENDYFKCIY-KKTASLFAISASI 185
Query: 227 GGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILE 260
G + GA+++ + +G A+G YQ+VDDILE
Sbjct: 186 GAYTGGAEEELAERFSHFGNALGTAYQIVDDILE 219
>UNIPROTKB|Q5LX97 [details] [associations]
symbol:ddsA "Decaprenyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0008834 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_165582.1 ProteinModelPortal:Q5LX97 GeneID:3194982
KEGG:sil:SPO0319 PATRIC:23373893 OMA:NDIRIIT ProtClustDB:CLSK933222
Uniprot:Q5LX97
Length = 332
Score = 202 (76.2 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 55/183 (30%), Positives = 93/183 (50%)
Query: 81 GTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNH 140
G KR P++ +AA L G A +E +H A+L+HDD+ +D+ RRG+P+ +
Sbjct: 51 GGKRLRPMLTLAAARLCGYQGEDHVKLAATVEFIHTATLLHDDV--VDESGQRRGRPTAN 108
Query: 141 TVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGS---TGMAAGQ 197
++ ++L GD LF FQ +V RVL ++A A + M A
Sbjct: 109 LLWDNKSSVLVGDYLFARSFQLMVE------TGSLRVLDILANAAATIAEGEVLQMTAAS 162
Query: 198 FLDLEGEPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDD 257
L + E ++ V+ K S + V GG +AG + ++++L YG A+G+ +Q+ DD
Sbjct: 163 DLRTD-ESVYLQVVRGKTAALFSAATEV-GGVIAGVPEAQVRALFEYGDALGIAFQIADD 220
Query: 258 ILE 260
+L+
Sbjct: 221 LLD 223
>TIGR_CMR|SPO_0319 [details] [associations]
symbol:SPO_0319 "decaprenyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0008834 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_165582.1 ProteinModelPortal:Q5LX97 GeneID:3194982
KEGG:sil:SPO0319 PATRIC:23373893 OMA:NDIRIIT ProtClustDB:CLSK933222
Uniprot:Q5LX97
Length = 332
Score = 202 (76.2 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 55/183 (30%), Positives = 93/183 (50%)
Query: 81 GTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNH 140
G KR P++ +AA L G A +E +H A+L+HDD+ +D+ RRG+P+ +
Sbjct: 51 GGKRLRPMLTLAAARLCGYQGEDHVKLAATVEFIHTATLLHDDV--VDESGQRRGRPTAN 108
Query: 141 TVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGS---TGMAAGQ 197
++ ++L GD LF FQ +V RVL ++A A + M A
Sbjct: 109 LLWDNKSSVLVGDYLFARSFQLMVE------TGSLRVLDILANAAATIAEGEVLQMTAAS 162
Query: 198 FLDLEGEPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDD 257
L + E ++ V+ K S + V GG +AG + ++++L YG A+G+ +Q+ DD
Sbjct: 163 DLRTD-ESVYLQVVRGKTAALFSAATEV-GGVIAGVPEAQVRALFEYGDALGIAFQIADD 220
Query: 258 ILE 260
+L+
Sbjct: 221 LLD 223
>TIGR_CMR|APH_1247 [details] [associations]
symbol:APH_1247 "octaprenyl-diphosphate synthase"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
ProtClustDB:CLSK749549 RefSeq:YP_505772.1 ProteinModelPortal:Q2GIM9
STRING:Q2GIM9 GeneID:3930831 KEGG:aph:APH_1247 PATRIC:20951282
OMA:MIPEISN BioCyc:APHA212042:GHPM-1251-MONOMER Uniprot:Q2GIM9
Length = 316
Score = 199 (75.1 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 64/213 (30%), Positives = 101/213 (47%)
Query: 55 QNLEKAITV-KYPE-QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALE 112
Q +E I ++ E Q+ + ++ G KR PVM +AAC + G A A+E
Sbjct: 10 QEMESLIVKQRHSEVQLIADIIQHLILSGGKRTRPVMLLAACGMLGCTDARRIVVAAAIE 69
Query: 113 MVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLV 172
+H+A+L+HDD+ +D RRG + ++++G +IL GD LF FQ IVS L+
Sbjct: 70 FLHSATLLHDDV--VDKSDMRRGVETANSIWGNKASILVGDFLFATAFQWIVSCNSIQLL 127
Query: 173 PEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEMSECSAVCGGFLAG 232
VL A I + + LD+ +E + K S A C
Sbjct: 128 S---VLSNTASIIVSGEMQQLVHSSSLDIS-RTKYLEIISSKTAVLFS---AACESAAVL 180
Query: 233 ADDDEIQ--SLRRYGRAVGVLYQVVDDILEAKA 263
D +Q +LR +G G+++Q++DDIL+ A
Sbjct: 181 HDVGTLQRNALRDWGFNFGIVFQILDDILDYTA 213
>TIGR_CMR|GSU_1317 [details] [associations]
symbol:GSU_1317 "octaprenyl-diphosphate synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102 RefSeq:NP_952370.1
ProteinModelPortal:Q74DJ9 GeneID:2686096 KEGG:gsu:GSU1317
PATRIC:22025411 OMA:FNKPVLE ProtClustDB:CLSK828295
BioCyc:GSUL243231:GH27-1296-MONOMER Uniprot:Q74DJ9
Length = 322
Score = 196 (74.1 bits), Expect = 9.9e-14, P = 9.9e-14
Identities = 60/192 (31%), Positives = 100/192 (52%)
Query: 77 VLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQ 136
VLA G KR P++ + + +L G P A +E +H A+L+HDD+ +D+ RRG
Sbjct: 37 VLASGGKRIRPMLLLLSAKLCGYQGDRHVPLASVIEFIHTATLLHDDV--VDNATLRRGN 94
Query: 137 PSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAG 196
S + V+G + ++L GD LF F +V + R+L+VI+ A + + G
Sbjct: 95 ASANEVWGNEASVLVGDFLFSKSFSLMVE------AGDLRILKVISG-ATTIIAEGEVL- 146
Query: 197 QFL---DLE-GEPNLVEFVQEKKFGEMSE-CSAVCGGFLAGADDDEIQSLRRYGRAVGVL 251
Q L DLE + +E V+ K +S C A G L + ++ ++LR +G +G+
Sbjct: 147 QLLCTSDLEMTQERYIEVVKSKTAVLLSAACEA--GAILGTSSAEQQEALRDFGMDLGIA 204
Query: 252 YQVVDDILEAKA 263
+Q++DD L+ A
Sbjct: 205 FQLMDDTLDYTA 216
>UNIPROTKB|Q3ACT5 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component II"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0009234 "menaquinone biosynthetic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K00805 GO:GO:0009234
OMA:KLYRFGY RefSeq:YP_360049.1 ProteinModelPortal:Q3ACT5
STRING:Q3ACT5 GeneID:3727089 KEGG:chy:CHY_1206 PATRIC:21275548
BioCyc:CHYD246194:GJCN-1205-MONOMER Uniprot:Q3ACT5
Length = 326
Score = 196 (74.1 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 61/220 (27%), Positives = 108/220 (49%)
Query: 50 ITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTAC 109
+ +I+Q L K ++ + E +++ + +L G KR P + A +L + P A
Sbjct: 19 LRKIEQELIKEVSERN-EFLHDPAMH-LLKAGGKRLRPAFALLAAKLGDYDFEKVKPLAV 76
Query: 110 ALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPP 169
ALE++H A+L+HDD+ +D+ RRG P+ +G ++I GD +F I S
Sbjct: 77 ALELIHMATLVHDDV--VDNSMLRRGLPTVKANWGNKMSIHIGDRIFAKSLLLIDSCKNN 134
Query: 170 HLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQE------KKFGEMSECS 223
+ V +V+AE+ S M G+ L G N+ +++ +K + S
Sbjct: 135 Y------VAKVLAEV-----SVKMTTGEIQQLNGAKNISTSIKDYLIKIKRKTALLLSAS 183
Query: 224 AVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA 263
GG +A + +L++YG VG+ +Q++DDIL+ A
Sbjct: 184 CELGGVMANVSPRVVNALKQYGLYVGMAFQIIDDILDFTA 223
>TIGR_CMR|CHY_1206 [details] [associations]
symbol:CHY_1206 "heptaprenyl diphosphate synthase
component II" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0009234 "menaquinone biosynthetic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K00805 GO:GO:0009234
OMA:KLYRFGY RefSeq:YP_360049.1 ProteinModelPortal:Q3ACT5
STRING:Q3ACT5 GeneID:3727089 KEGG:chy:CHY_1206 PATRIC:21275548
BioCyc:CHYD246194:GJCN-1205-MONOMER Uniprot:Q3ACT5
Length = 326
Score = 196 (74.1 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 61/220 (27%), Positives = 108/220 (49%)
Query: 50 ITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTAC 109
+ +I+Q L K ++ + E +++ + +L G KR P + A +L + P A
Sbjct: 19 LRKIEQELIKEVSERN-EFLHDPAMH-LLKAGGKRLRPAFALLAAKLGDYDFEKVKPLAV 76
Query: 110 ALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPP 169
ALE++H A+L+HDD+ +D+ RRG P+ +G ++I GD +F I S
Sbjct: 77 ALELIHMATLVHDDV--VDNSMLRRGLPTVKANWGNKMSIHIGDRIFAKSLLLIDSCKNN 134
Query: 170 HLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQE------KKFGEMSECS 223
+ V +V+AE+ S M G+ L G N+ +++ +K + S
Sbjct: 135 Y------VAKVLAEV-----SVKMTTGEIQQLNGAKNISTSIKDYLIKIKRKTALLLSAS 183
Query: 224 AVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA 263
GG +A + +L++YG VG+ +Q++DDIL+ A
Sbjct: 184 CELGGVMANVSPRVVNALKQYGLYVGMAFQIIDDILDFTA 223
>TIGR_CMR|SO_3653 [details] [associations]
symbol:SO_3653 "octaprenyl-diphosphate synthase"
species:211586 "Shewanella oneidensis MR-1" [GO:0006744 "ubiquinone
biosynthetic process" evidence=ISS] [GO:0009234 "menaquinone
biosynthetic process" evidence=ISS] [GO:0016765 "transferase
activity, transferring alkyl or aryl (other than methyl) groups"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102 OMA:YITSAGG
RefSeq:NP_719195.2 ProteinModelPortal:Q8EB79 GeneID:1171312
KEGG:son:SO_3653 PATRIC:23526992 ProtClustDB:CLSK907271
Uniprot:Q8EB79
Length = 331
Score = 194 (73.4 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 54/203 (26%), Positives = 98/203 (48%)
Query: 69 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMD 128
+ + + ++ G KR P++ V A A A +E +H ASL+HDD+ +D
Sbjct: 39 LINQLGFYIINGGGKRLRPLLSVLAARAVDYQGEAHLKLAAIIEFIHTASLLHDDV--VD 96
Query: 129 DDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAV 188
+ RRG+ + + ++G ++L GD L+ FQ + + RVLRV+A+
Sbjct: 97 ESTLRRGRETANALFGNSASVLVGDFLYTRSFQMMTE------LDSMRVLRVLADTTNV- 149
Query: 189 GSTGMAAGQFLDLEG--EPNLVEFVQEK----KFGEMSECSAVCGGFLAGADDDEIQSLR 242
+A G+ L L +P+ E + K ++ E + + LAGA ++ +L
Sbjct: 150 ----LAEGEVLQLMNCNDPDTTEESYMRVIYCKTAKLFEAATLLAAVLAGASPEQETALG 205
Query: 243 RYGRAVGVLYQVVDDILEAKAQT 265
YG+ +G +Q+ DD+L+ A +
Sbjct: 206 DYGKYLGTAFQLTDDLLDYTADS 228
>TIGR_CMR|BA_1535 [details] [associations]
symbol:BA_1535 "heptaprenyl diphosphate synthase component
II" species:198094 "Bacillus anthracis str. Ames" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=ISS]
[GO:0009234 "menaquinone biosynthetic process" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879
EMBL:AE017334 GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR
HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K00805 OMA:KLYRFGY ProtClustDB:CLSK873092
InterPro:IPR014119 TIGRFAMs:TIGR02748 RefSeq:NP_843986.1
RefSeq:YP_018158.1 ProteinModelPortal:Q81SV9 DNASU:1087064
EnsemblBacteria:EBBACT00000008063 EnsemblBacteria:EBBACT00000013944
GeneID:1087064 GeneID:2816030 KEGG:ban:BA_1535 KEGG:bar:GBAA_1535
PATRIC:18780664 BioCyc:BANT261594:GJ7F-1560-MONOMER Uniprot:Q81SV9
Length = 320
Score = 191 (72.3 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 62/214 (28%), Positives = 103/214 (48%)
Query: 50 ITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFP-TA 108
I I++ L+K + + P + E ++ G KR PV + A + FG ++ A A
Sbjct: 14 INVIEKELKKTVASEQP--LVEEAALQLIEAGGKRIRPVFVLLAGK-FGDYKLDAIKHVA 70
Query: 109 CALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTP 168
ALE++H ASL+HDD+ +D RRG + + +G IA+ GD LF + I +
Sbjct: 71 VALELIHMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEI 128
Query: 169 PHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQ--EKKFGEMSECSAVC 226
P + I E+ + G ++ + NL +++ ++K + S
Sbjct: 129 PEA--HQALSHTILEVCK--GEIEQIKDKY---NYDQNLRTYLRRIKRKTALLIAASCQL 181
Query: 227 GGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILE 260
G AGA+ D + L YG VG+ YQ++DDIL+
Sbjct: 182 GAIAAGANRDTVSRLFWYGYFVGMSYQIIDDILD 215
>TAIR|locus:2202940 [details] [associations]
symbol:SPS1 "solanesyl diphosphate synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0015979 "photosynthesis" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IGI;IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0006744 "ubiquinone biosynthetic process" evidence=IGI;RCA]
InterPro:IPR000092 InterPro:IPR014120 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0005783 EMBL:CP002684 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006744
GO:GO:0015979 EMBL:AC007260 eggNOG:COG0142 HOGENOM:HOG000009104
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
BRENDA:2.5.1.11 EMBL:AB071514 EMBL:AB188497 EMBL:BT025550
EMBL:AK229738 IPI:IPI00525401 IPI:IPI00542022 IPI:IPI00846461
PIR:F96813 RefSeq:NP_001077840.1 RefSeq:NP_177972.2
UniGene:At.34283 ProteinModelPortal:Q8S948 SMR:Q8S948 STRING:Q8S948
PRIDE:Q8S948 EnsemblPlants:AT1G78510.1 GeneID:844187
KEGG:ath:AT1G78510 TAIR:At1g78510 InParanoid:Q8S948 KO:K05356
OMA:EFIVERK ProtClustDB:PLN02857 BioCyc:ARA:AT1G78510-MONOMER
BioCyc:MetaCyc:AT1G78510-MONOMER Genevestigator:Q8S948
GO:GO:0052924 PANTHER:PTHR12001:SF18 TIGRFAMs:TIGR02749
Uniprot:Q8S948
Length = 406
Score = 188 (71.2 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 65/251 (25%), Positives = 119/251 (47%)
Query: 25 SSLPVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKR 84
S P+S + DL+T L++ + E + + EQI+ + G KR
Sbjct: 78 SKQPISLVTLFELVAVDLQTLNDNLLSIV--GAENPVLISAAEQIFGA--------GGKR 127
Query: 85 APP--VMCV--AACELFGVNRIAAFPTACA--LEMVHAASLIHDDLPCMDDDPSRRGQPS 138
P V V A EL G+ + A +EM+H ASLIHDD+ +D+ RRG+ +
Sbjct: 128 MRPGLVFLVSHATAELAGLKELTTEHRRLAEIIEMIHTASLIHDDV--LDESDMRRGKET 185
Query: 139 NHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIAR--AVGSTGMAAG 196
H ++G +A+LAGD +F ++ + + V+++I+++ + A G A+
Sbjct: 186 VHELFGTRVAVLAGDFMFAQASWYLAN------LENLEVIKLISQVIKDFASGEIKQASS 239
Query: 197 QFLDLEGEPNLVEFVQEKKFGEMSECSAVCGG--FLAGADDDEIQSLRRYGRAVGVLYQV 254
F + + L E++ + + S +A G + + D + + +G+ +G+ +Q+
Sbjct: 240 LF---DCDTKLDEYLLKSFYKTASLVAASTKGAAIFSRVEPDVTEQMYEFGKNLGLSFQI 296
Query: 255 VDDILEAKAQT 265
VDDIL+ T
Sbjct: 297 VDDILDFTQST 307
>UNIPROTKB|P31114 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component 2"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0009234 "menaquinone biosynthetic process" evidence=IMP]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0030435
EMBL:AL009126 GenomeReviews:AL009126_GR EMBL:M80245
HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0016765 KO:K00805 GO:GO:0009234 PIR:E69630
RefSeq:NP_390155.1 ProteinModelPortal:P31114 SMR:P31114
DNASU:939002 EnsemblBacteria:EBBACT00000001536 GeneID:939002
KEGG:bsu:BSU22740 PATRIC:18976359 GenoList:BSU22740 OMA:KLYRFGY
ProtClustDB:CLSK873092 BioCyc:BSUB:BSU22740-MONOMER
BioCyc:MetaCyc:MONOMER-13770 InterPro:IPR014119 TIGRFAMs:TIGR02748
Uniprot:P31114
Length = 348
Score = 186 (70.5 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 62/218 (28%), Positives = 108/218 (49%)
Query: 50 ITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG---VNRIAAFP 106
I I++ LE+ + YP + +L G KR PV V +FG +N+I
Sbjct: 42 IDVIERELEQTVRSDYP--LLSEAGLHLLQAGGKRIRPVF-VLLSGMFGDYDINKIKY-- 96
Query: 107 TACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSH 166
A LEM+H ASL+HDD+ +DD RRG+P+ + IA+ GD + G +++
Sbjct: 97 VAVTLEMIHMASLVHDDV--IDDAELRRGKPTIKAKWDNRIAMYTGDYMLA-GSLEMMTR 153
Query: 167 TPPHLVPEPRVLRVIAE--IARAVGSTGMAAGQFLDLEGEPNLVEFVQ--EKKFGEMSEC 222
+ EP+ R++++ + +G ++ E NL +++ ++K +
Sbjct: 154 -----INEPKAHRILSQTIVEVCLGEIEQIKDKY---NMEQNLRTYLRRIKRKTALLIAV 205
Query: 223 SAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILE 260
S G +GAD+ ++L +G VG+ YQ++DDIL+
Sbjct: 206 SCQLGAIASGADEKIHKALYWFGYYVGMSYQIIDDILD 243
>TIGR_CMR|CBU_0382 [details] [associations]
symbol:CBU_0382 "octylprenyl diphosphate synthase-like
protein" species:227377 "Coxiella burnetii RSA 493" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161 GO:GO:0004337
KO:K02523 HOGENOM:HOG000009102 OMA:SIKAMNV RefSeq:NP_819421.1
ProteinModelPortal:Q83EE2 GeneID:1208265 KEGG:cbu:CBU_0382
PATRIC:17929459 ProtClustDB:CLSK914032
BioCyc:CBUR227377:GJ7S-383-MONOMER Uniprot:Q83EE2
Length = 332
Score = 184 (69.8 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 51/216 (23%), Positives = 109/216 (50%)
Query: 50 ITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNR-IAAFPTA 108
I +D + K ++ P + E++ + ++ G KR P++ + G + + A
Sbjct: 23 IEAVDALIVKELSSHVP--LIETITHHIIQSGGKRLRPLVVLLTARACGYEQDVEHQELA 80
Query: 109 CALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTP 168
+E +H A+L+HDD+ +D RRGQ + + ++G ++L GD L+ FQ + +
Sbjct: 81 TVIEFIHTATLLHDDV--VDKSTQRRGQKTANALWGNSASVLVGDFLYSRAFQILARRSN 138
Query: 169 PHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF----VQEKKFGEMSECSA 224
VP +++++A + S G Q ++ + +P++ E V +K ++ +A
Sbjct: 139 ---VP---IMKILATTTNQI-SEG-EVWQLMN-QNDPDIDEVTYYEVIRRKTAQLFSAAA 189
Query: 225 VCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILE 260
G +A ++ +S+ +G +G+ YQ++DD+L+
Sbjct: 190 EIGAIVATKNETWQKSMAAFGFHLGMAYQIIDDLLD 225
>UNIPROTKB|O66129 [details] [associations]
symbol:hexs-b "Hexaprenyl-diphosphate synthase large
subunit ((2E,6E)-farnesyl-diphosphate specific)" species:1270
"Micrococcus luteus" [GO:0000287 "magnesium ion binding"
evidence=IDA] [GO:0016765 "transferase activity, transferring alkyl
or aryl (other than methyl) groups" evidence=IDA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
GO:GO:0000287 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765
GO:GO:0009234 EMBL:AB003188 PDB:3AQB PDB:3AQC PDBsum:3AQB
PDBsum:3AQC GO:GO:0052923 ProteinModelPortal:O66129
BioCyc:MetaCyc:MONOMER-13829 ChEMBL:CHEMBL3128
EvolutionaryTrace:O66129 Uniprot:O66129
Length = 325
Score = 182 (69.1 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 58/223 (26%), Positives = 103/223 (46%)
Query: 43 KTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRI 102
K + I E+++ L + I E I ++ + +L+ G KR P+ + + L +
Sbjct: 7 KAFLNPYIIEVEKRLYECIQSD-SETINKAAHH-ILSSGGKRVRPMFVLLSGFLNDTQKD 64
Query: 103 AAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQH 162
TA +LE+VH ASL+HDD +D+ RRG S H + D AI G L Q+
Sbjct: 65 DLIRTAVSLELVHMASLVHDDY--IDNSDMRRGNTSVHIAFDKDTAIRTGHFLLARALQN 122
Query: 163 I--VSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP-NLVEFVQE--KKFG 217
I ++++ H + +L V G A +F P + +++ +K
Sbjct: 123 IATINNSKFHQIFSKTILEV------CFGEFDQMADRF----NYPVSFTAYLRRINRKTA 172
Query: 218 EMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILE 260
+ E S G + D+ ++++G +G+ YQ++DDIL+
Sbjct: 173 ILIEASCHLGALSSQLDEQSTYHIKQFGHCIGMSYQIIDDILD 215
>TIGR_CMR|DET_0389 [details] [associations]
symbol:DET_0389 "heptaprenyl diphosphate synthase
component II" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0009234 "menaquinone biosynthetic process" evidence=ISS]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000027 GenomeReviews:CP000027_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 OMA:EFIVERK
RefSeq:YP_181134.1 ProteinModelPortal:Q3Z9G5 STRING:Q3Z9G5
GeneID:3230282 KEGG:det:DET0389 PATRIC:21607847
ProtClustDB:CLSK837510 BioCyc:DETH243164:GJNF-389-MONOMER
Uniprot:Q3Z9G5
Length = 324
Score = 174 (66.3 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 54/198 (27%), Positives = 96/198 (48%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
+PE E + Y ++ G K P + + + FG P A + EM+H A+L+HDD
Sbjct: 33 FPEMA-EMLDYILV--GGKVLRPALSMLSAMCFGTGIKKVLPLATSSEMLHIATLVHDD- 88
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
+D +RR + + ++V+G++ AIL GD LF + + + T R++ + A+
Sbjct: 89 -AIDKADTRRSRRTVNSVWGLEKAILLGDFLFAHAAE-VAAETD-----NMRIVTLFAQT 141
Query: 185 ARAV--GSTGMAAGQFLDLEGEPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLR 242
+ + G A F + N +E + K + + G LA A + + +R
Sbjct: 142 LQIIASGELKQAYASFNPDQSYENYLERISGKT-AALFVMATKGGAILADASPSDEEIMR 200
Query: 243 RYGRAVGVLYQVVDDILE 260
YG +G+ +Q+VDDIL+
Sbjct: 201 SYGYNLGLSFQIVDDILD 218
>UNIPROTKB|P55785 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component 2"
species:1422 "Geobacillus stearothermophilus" [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765
GO:GO:0009234 InterPro:IPR014119 TIGRFAMs:TIGR02748 EMBL:D49976
ProteinModelPortal:P55785 Uniprot:P55785
Length = 320
Score = 173 (66.0 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 58/213 (27%), Positives = 101/213 (47%)
Query: 50 ITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFP-TA 108
+ +++ LE+A+ +Y + E+ + +L G KR PV + A FG + A
Sbjct: 14 LAAVEEELERAVQSEYGP-LGEAALH-LLQAGGKRIRPVFVLLAAR-FGQYDLERMKHVA 70
Query: 109 CALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTP 168
ALE++H ASL+HDD+ +DD RRG+P+ + A+ GD LF + +
Sbjct: 71 VALELIHMASLVHDDV--IDDADLRRGRPTIKAKWSNRFAMYTGDYLFARSLERMAELGN 128
Query: 169 PHLVPEPRVL-RVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEMSECSAVCG 227
P +VL + I E+ R G ++ + + ++ +K + S G
Sbjct: 129 PRA---HQVLAKTIVEVCR--GEIEQIKDKYRFDQPLRTYLRRIR-RKTALLIAASCQLG 182
Query: 228 GFLAGADDDEIQSLRRYGRAVGVLYQVVDDILE 260
AGA + ++ L +G VG+ +Q+ DDIL+
Sbjct: 183 ALAAGAPEPIVKRLYWFGHYVGMSFQITDDILD 215
>UNIPROTKB|Q9KUT1 [details] [associations]
symbol:VC_0434 "Octaprenyl-diphosphate synthase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006744 "ubiquinone biosynthetic process" evidence=ISS]
[GO:0009234 "menaquinone biosynthetic process" evidence=ISS]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006744 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765 OMA:QQFPELH
KO:K02523 GO:GO:0009234 PIR:A82322 RefSeq:NP_230088.1
ProteinModelPortal:Q9KUT1 DNASU:2615695 GeneID:2615695
KEGG:vch:VC0434 PATRIC:20079947 ProtClustDB:CLSK873977
Uniprot:Q9KUT1
Length = 348
Score = 171 (65.3 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 52/249 (20%), Positives = 115/249 (46%)
Query: 20 FPVRCS-SLPVSAASQLRSTQFDLKTYWTTLITEIDQ-NLEKAITVKYPEQI--YESMRY 75
F V CS S ++A L S F + +T D + + I + + + +
Sbjct: 3 FSVLCSDSRRLNALHALISAGFTMDFKAIQALTANDMAKVNETIHAQLNSDVSLINQLGF 62
Query: 76 SVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRG 135
+++ G KR P++ V + + G A +E +H A+L+HDD+ +D+ RRG
Sbjct: 63 YIISGGGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRG 120
Query: 136 QPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAA 195
+ + + +G ++L GD ++ FQ + + ++L+++++ + +
Sbjct: 121 KATANAAFGNAASVLVGDFIYTRSFQMMTE------LGSMKILKLMSDAVNVIAEGEVQ- 173
Query: 196 GQFLDLEGEPNLVE--FVQE--KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVL 251
Q ++ +P+ E ++Q K + E + G L A + +++ YG+ +G
Sbjct: 174 -QLMNCN-DPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTA 231
Query: 252 YQVVDDILE 260
+Q++DD+++
Sbjct: 232 FQLIDDVMD 240
>TIGR_CMR|VC_0434 [details] [associations]
symbol:VC_0434 "octaprenyl-diphosphate synthase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006744 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765 OMA:QQFPELH
KO:K02523 GO:GO:0009234 PIR:A82322 RefSeq:NP_230088.1
ProteinModelPortal:Q9KUT1 DNASU:2615695 GeneID:2615695
KEGG:vch:VC0434 PATRIC:20079947 ProtClustDB:CLSK873977
Uniprot:Q9KUT1
Length = 348
Score = 171 (65.3 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 52/249 (20%), Positives = 115/249 (46%)
Query: 20 FPVRCS-SLPVSAASQLRSTQFDLKTYWTTLITEIDQ-NLEKAITVKYPEQI--YESMRY 75
F V CS S ++A L S F + +T D + + I + + + +
Sbjct: 3 FSVLCSDSRRLNALHALISAGFTMDFKAIQALTANDMAKVNETIHAQLNSDVSLINQLGF 62
Query: 76 SVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRG 135
+++ G KR P++ V + + G A +E +H A+L+HDD+ +D+ RRG
Sbjct: 63 YIISGGGKRLRPLLAVLSAKALGYQGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRG 120
Query: 136 QPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAA 195
+ + + +G ++L GD ++ FQ + + ++L+++++ + +
Sbjct: 121 KATANAAFGNAASVLVGDFIYTRSFQMMTE------LGSMKILKLMSDAVNVIAEGEVQ- 173
Query: 196 GQFLDLEGEPNLVE--FVQE--KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVL 251
Q ++ +P+ E ++Q K + E + G L A + +++ YG+ +G
Sbjct: 174 -QLMNCN-DPDTTEASYMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTA 231
Query: 252 YQVVDDILE 260
+Q++DD+++
Sbjct: 232 FQLIDDVMD 240
>TAIR|locus:2020362 [details] [associations]
symbol:SPS2 "solanesyl diphosphate synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0015979 "photosynthesis" evidence=IEA]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=IGI;RCA] [GO:0009536 "plastid"
evidence=IDA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IGI] [GO:0009570 "chloroplast stroma"
evidence=IDA] InterPro:IPR000092 InterPro:IPR014120 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009570 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006744
GO:GO:0015979 EMBL:AC007651 eggNOG:COG0142 HOGENOM:HOG000009104
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
OMA:KLYRFGY KO:K05356 ProtClustDB:PLN02857 GO:GO:0052924
PANTHER:PTHR12001:SF18 TIGRFAMs:TIGR02749 EMBL:AB104727
EMBL:AB188498 EMBL:BT028962 EMBL:BT004246 IPI:IPI00518205
PIR:C86306 RefSeq:NP_173148.2 UniGene:At.43587
ProteinModelPortal:Q76FS5 SMR:Q76FS5 STRING:Q76FS5 PaxDb:Q76FS5
PRIDE:Q76FS5 EnsemblPlants:AT1G17050.1 GeneID:838275
KEGG:ath:AT1G17050 TAIR:At1g17050 InParanoid:Q76FS5
PhylomeDB:Q76FS5 BioCyc:ARA:AT1G17050-MONOMER
BioCyc:MetaCyc:AT1G17050-MONOMER Genevestigator:Q76FS5
Uniprot:Q76FS5
Length = 417
Score = 172 (65.6 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 57/226 (25%), Positives = 109/226 (48%)
Query: 50 ITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPP--VMCV--AACELFGVNRIAAF 105
+ ++ NL + + P I S + + G KR P V V A EL G+ +
Sbjct: 106 LQRLNDNLLSIVGAENPVLI--SAAEQIFSAGGKRMRPGLVFLVSRATAELAGLKELTVE 163
Query: 106 PTACA--LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHI 163
+EM+H ASLIHDD+ +D+ RRG+ + H ++G +A+LAGD +F ++
Sbjct: 164 HRRLGEIIEMIHTASLIHDDV--LDESDMRRGRETVHELFGTRVAVLAGDFMFAQASWYL 221
Query: 164 VSHTPPHLVPEPRVLRVIAEIAR--AVGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEMSE 221
+ + V+++I+++ + A G A+ F + + L +++ + + S
Sbjct: 222 AN------LENLEVIKLISQVIKDFASGEIKQASSLF---DCDVKLDDYMLKSYYKTASL 272
Query: 222 CSAVCGG--FLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT 265
+A G + + + + ++G+ +G+ +QVVDDIL+ T
Sbjct: 273 VAASTKGAAIFSKVESKVAEQMYQFGKNLGLSFQVVDDILDFTQST 318
>TIGR_CMR|CJE_0645 [details] [associations]
symbol:CJE_0645 "polyprenyl synthetase family protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000025
GenomeReviews:CP000025_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_178660.1 ProteinModelPortal:Q5HVM5 STRING:Q5HVM5
GeneID:3232032 KEGG:cjr:CJE0645 PATRIC:20043010 OMA:DIQDESE
ProtClustDB:CLSK872307 BioCyc:CJEJ195099:GJC0-660-MONOMER
Uniprot:Q5HVM5
Length = 297
Score = 168 (64.2 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 51/166 (30%), Positives = 86/166 (51%)
Query: 104 AFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHI 163
AF A+E++H ASL+HDD+ +D+ RRG S + +G A++ GD L+ F +
Sbjct: 48 AFKICAAIELIHLASLLHDDI--IDESELRRGARSVNAEFGTKNALMLGDILYSKAFYEL 105
Query: 164 VSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLE-GEP-NLVEFVQEK----KFG 217
+ R +I++ AV +A G+ +D++ GE N+ + K K
Sbjct: 106 SKM-------DARFASIISD---AV--VKLAIGELMDVDLGEKFNINKEAYLKMIYNKTA 153
Query: 218 EMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA 263
+ E SA CG LAG + + YG+ +G+ +Q++DDIL+ K+
Sbjct: 154 VLIEASARCGAILAGLYEKDFAE---YGKNLGLAFQMIDDILDIKS 196
>UNIPROTKB|E1BZW8 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0050347
"trans-octaprenyltranstransferase activity" evidence=IEA]
[GO:0051290 "protein heterotetramerization" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0051290 GeneTree:ENSGT00530000063378 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
OMA:QQFPELH EMBL:AADN02000555 IPI:IPI00572129
ProteinModelPortal:E1BZW8 Ensembl:ENSGALT00000012224
NextBio:20823389 Uniprot:E1BZW8
Length = 366
Score = 170 (64.9 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 65/263 (24%), Positives = 122/263 (46%)
Query: 12 PCVC-LPRKFPVRCSSLPVSAASQLRSTQF-DLKTYWTTLITEIDQNLEKAITVKYPEQI 69
P +C +P +F ++L S + + ++ D + + ++++K + V E +
Sbjct: 14 PKLCSIPWRFHHTSTALMCSCSKTVSDEKYQDPFQLGRKDLKNLYEDIKKELLVSTAE-L 72
Query: 70 YESMRYSVLAKGTKRAPP--VMCVAACELFGVN--RIAAFPTACAL--EMVHAASLIHDD 123
E Y KG P V+ AC + N + A + A+ EM+H ASL+HDD
Sbjct: 73 REMCEYYFDGKGKAFRPMIVVLMARACNIHHSNSREVQASQRSVAIIAEMIHTASLVHDD 132
Query: 124 LPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAE 183
+ +DD SRRG+ + + ++G A+LAGD + + + ++ V+ +
Sbjct: 133 V--IDDANSRRGKMTVNQIWGERKAVLAGDFILSAASLALAR------IGNTTIISVLTQ 184
Query: 184 IARAVGSTGMAAGQFLDLEGEPNLVE-FVQ--EKKFGEMSECSA-VCGGF-LAGADDDEI 238
+ + G+FL L + N E F EK F + + A C + G D ++
Sbjct: 185 VIE-----DLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSILGCPDPKV 239
Query: 239 QSLR-RYGRAVGVLYQVVDDILE 260
+ +YG+ VG+ +Q++DD+L+
Sbjct: 240 HEIAYQYGKNVGIAFQLIDDVLD 262
>UNIPROTKB|F1PV51 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051290 "protein heterotetramerization"
evidence=IEA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0051290 GeneTree:ENSGT00530000063378
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0050347 OMA:QQFPELH EMBL:AAEX03001171
Ensembl:ENSCAFT00000006952 Uniprot:F1PV51
Length = 365
Score = 169 (64.5 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 61/230 (26%), Positives = 106/230 (46%)
Query: 43 KTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAP--PVMCVAACELFGVN 100
K W L + +++ K + + E + E Y KG P V+ AC + N
Sbjct: 47 KLGWRDL-NGLYEDIRKELLISTTE-LKEMSEYYFDGKGKAFRPIIVVLMARACNIHHSN 104
Query: 101 R--IAAFPTACAL--EMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
+ A + AL EM+H ASL+HDD+ +DD SRRG+ + + ++G A+LAGD +
Sbjct: 105 SRDVQASQRSIALIAEMIHTASLVHDDV--IDDASSRRGKHTVNKIWGEKKAVLAGDLIL 162
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVE-FVQ--E 213
+ + V+ ++ ++ + G+FL L + N E F E
Sbjct: 163 SAASMALAR------IGNTTVISILTQVIE-----DLVRGEFLQLGSKENENERFAHYLE 211
Query: 214 KKFGEMSECSA-VCGGF-LAGADDDEIQSLR-RYGRAVGVLYQVVDDILE 260
K F + + A C + G D + + +YG+ VG+ +Q++DD+L+
Sbjct: 212 KTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLD 261
>UNIPROTKB|F6RJN8 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051290 "protein heterotetramerization" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0051290 GeneTree:ENSGT00530000063378 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
OMA:QQFPELH EMBL:DAAA02035357 EMBL:DAAA02035358 EMBL:DAAA02035359
IPI:IPI00701533 UniGene:Bt.52184 ProteinModelPortal:F6RJN8
Ensembl:ENSBTAT00000008576 Uniprot:F6RJN8
Length = 418
Score = 170 (64.9 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 62/230 (26%), Positives = 106/230 (46%)
Query: 43 KTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAP--PVMCVAACELFGVN 100
K W L + +++ K + + E + E Y KG P V+ AC + N
Sbjct: 100 KIGWRDL-KGLYEDIRKELFISTAE-LREMSEYHFDGKGKAFRPIIVVLMARACNIHHNN 157
Query: 101 --RIAAFPTACAL--EMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
+ A A AL EM+H ASL+HDD+ +DD SRRG+ + + ++G A+LAGD +
Sbjct: 158 ARNVQASQRAIALIAEMIHTASLVHDDI--IDDASSRRGKHTVNKIWGEKKAVLAGDLIL 215
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVE-FVQ--E 213
+ + V+ ++ ++ + G+FL L + N E F E
Sbjct: 216 SAASIALAR------IGNTTVISILTQVIE-----DLVRGEFLQLGSKENENERFAHYLE 264
Query: 214 KKFGEMSECSA-VCGGF-LAGADDDEIQSLR-RYGRAVGVLYQVVDDILE 260
K F + + A C + G D + + +YG+ VG+ +Q++DD+L+
Sbjct: 265 KTFKKTASLIANSCKAVSVLGCPDPAVHEIAYQYGKNVGIAFQLIDDVLD 314
>UNIPROTKB|Q5T2R2 [details] [associations]
symbol:PDSS1 "Decaprenyl-diphosphate synthase subunit 1"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IEA] [GO:0051290 "protein heterotetramerization"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006744
"ubiquinone biosynthetic process" evidence=IEA;IDA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IDA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IDA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00232 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006744
EMBL:AL390961 GO:GO:0046982 GO:GO:0051290 eggNOG:COG0142
HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0050347 EMBL:AF118395 EMBL:AB210838
EMBL:AK223414 EMBL:BC049211 EMBL:BC063635 IPI:IPI00440542
IPI:IPI00456157 IPI:IPI00719538 RefSeq:NP_055132.2
UniGene:Hs.558468 ProteinModelPortal:Q5T2R2 SMR:Q5T2R2
STRING:Q5T2R2 PhosphoSite:Q5T2R2 DMDM:74744657 PaxDb:Q5T2R2
PRIDE:Q5T2R2 Ensembl:ENST00000376203 Ensembl:ENST00000376215
GeneID:23590 KEGG:hsa:23590 UCSC:uc001isv.3 UCSC:uc001isw.3
CTD:23590 GeneCards:GC10P026986 HGNC:HGNC:17759 HPA:HPA038032
MIM:607429 MIM:614651 neXtProt:NX_Q5T2R2 Orphanet:254898
PharmGKB:PA134982512 HOVERGEN:HBG054389 InParanoid:Q5T2R2 KO:K12504
OMA:QQFPELH OrthoDB:EOG4TQM94 BioCyc:MetaCyc:HS07530-MONOMER
BRENDA:2.5.1.11 GenomeRNAi:23590 NextBio:46232 ArrayExpress:Q5T2R2
Bgee:Q5T2R2 CleanEx:HS_PDSS1 Genevestigator:Q5T2R2
GermOnline:ENSG00000148459 Uniprot:Q5T2R2
Length = 415
Score = 167 (63.8 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 61/230 (26%), Positives = 107/230 (46%)
Query: 43 KTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAA--CELFGVN 100
K W L + +++ K + + E + E Y KG P ++ + A C + N
Sbjct: 97 KLGWRDL-KGLYEDIRKELLISTSE-LKEMSEYYFDGKGKAFRPIIVALMARACNIHHNN 154
Query: 101 --RIAAFPTACAL--EMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
+ A A AL EM+H ASL+HDD+ +DD SRRG+ + + ++G A+LAGD +
Sbjct: 155 SRHVQASQRAIALIAEMIHTASLVHDDV--IDDASSRRGKHTVNKIWGEKKAVLAGDLIL 212
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVE-FVQ--E 213
+ + V+ ++ ++ + G+FL L + N E F E
Sbjct: 213 SAASIALAR------IGNTTVISILTQVIE-----DLVRGEFLQLGSKENENERFAHYLE 261
Query: 214 KKFGEMSECSA-VCGGF-LAGADDDEIQSLR-RYGRAVGVLYQVVDDILE 260
K F + + A C + G D + + +YG+ VG+ +Q++DD+L+
Sbjct: 262 KTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLD 311
>TIGR_CMR|NSE_0238 [details] [associations]
symbol:NSE_0238 "polyprenyl synthetase family protein"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0004659
"prenyltransferase activity" evidence=ISS] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000237
GenomeReviews:CP000237_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_506132.1 ProteinModelPortal:Q2GEG4 STRING:Q2GEG4
GeneID:3932073 KEGG:nse:NSE_0238 PATRIC:22680571 OMA:MIYYKTA
ProtClustDB:CLSK2527623 BioCyc:NSEN222891:GHFU-268-MONOMER
Uniprot:Q2GEG4
Length = 321
Score = 160 (61.4 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 54/229 (23%), Positives = 116/229 (50%)
Query: 38 TQFD-LKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYS--VLAKGTK-RAP-PVMCVA 92
T +D L ++ + +++ L ++T + + +S+ Y+ +L+ G + RA ++ A
Sbjct: 2 TAYDFLNASFSEKLRSVEEVLHDSMTT-FTK--LKSIEYAKKMLSSGKRIRALLSLLSFA 58
Query: 93 ACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAG 152
C+ N A A +E++H A+L+HDD+ +D++ RRG+P+ +++G I++L G
Sbjct: 59 LCKNADTN--AEIRAAATIELIHNATLMHDDV--VDENSIRRGKPNIKSIHGNKISVLTG 114
Query: 153 DALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFL-DLEGEPNLVEFV 211
D L + F+ I+ V+ ++++ A+ + M Q + ++ E +E +
Sbjct: 115 DFLLSVAFEIILE------CKNLSVVLLLSKTAKQLSEGEMLQLQSIGEIVSESEYLEVI 168
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILE 260
+K + +A L G + + LR G +G+ +Q+ DD+L+
Sbjct: 169 A-RKTAVLFSAAAEIAAILTGKQE-YVVILREIGFLIGMAFQITDDVLD 215
Score = 40 (19.1 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 310 GDNVLPLYSFIDYAADREF 328
G ++L + +F+ YAA+R +
Sbjct: 303 GASLLTMKTFLRYAAERPY 321
>TIGR_CMR|CPS_4513 [details] [associations]
symbol:CPS_4513 "octaprenyl-diphosphate synthase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
OMA:YITSAGG RefSeq:YP_271161.1 ProteinModelPortal:Q47VL1
STRING:Q47VL1 GeneID:3518869 KEGG:cps:CPS_4513 PATRIC:21471849
BioCyc:CPSY167879:GI48-4522-MONOMER Uniprot:Q47VL1
Length = 327
Score = 163 (62.4 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 49/189 (25%), Positives = 91/189 (48%)
Query: 81 GTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNH 140
G KR P++ V A F A +E +H A+L+HDD+ +D+ RRG+ + +
Sbjct: 47 GGKRMRPMLTVLAARAFAYQGDKHLEIAAIIEFIHTATLLHDDV--VDESNMRRGRETAN 104
Query: 141 TVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLD 200
++G ++L GD L+ FQ + + + R++ +++E V A G+ L
Sbjct: 105 ALFGNSASVLVGDFLYTRSFQMMTK------LGDMRIMDILSEATNIV-----AEGEVLQ 153
Query: 201 LEG--EPNLVE--FVQEK--KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQV 254
L + + E ++Q K ++ E + +A D Q++ YG+ +G +Q+
Sbjct: 154 LMNCNDASTTEESYMQVIYCKTAKLFEAATRLAAVIAKQDAKIEQAMADYGKYLGTAFQL 213
Query: 255 VDDILEAKA 263
VDDI++ A
Sbjct: 214 VDDIMDYTA 222
>MGI|MGI:1889278 [details] [associations]
symbol:Pdss1 "prenyl (solanesyl) diphosphate synthase,
subunit 1" species:10090 "Mus musculus" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=ISO;IDA] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISO;IDA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=ISO;IDA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IDA] [GO:0051290 "protein heterotetramerization"
evidence=IPI] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00232 MGI:MGI:1889278 GO:GO:0005739
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0006744 UniGene:Mm.249752 GO:GO:0046982 GO:GO:0051290
eggNOG:COG0142 GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
CTD:23590 HOVERGEN:HBG054389 KO:K12504 OMA:QQFPELH BRENDA:2.5.1.11
EMBL:AB210841 EMBL:CT030013 EMBL:BC026820 EMBL:BC107273
EMBL:BC107274 EMBL:AF118855 IPI:IPI00123984 RefSeq:NP_062374.2
ProteinModelPortal:Q33DR2 SMR:Q33DR2 STRING:Q33DR2
PhosphoSite:Q33DR2 PRIDE:Q33DR2 Ensembl:ENSMUST00000053729
GeneID:56075 KEGG:mmu:56075 UCSC:uc008inq.1 InParanoid:Q33DR2
NextBio:311864 Bgee:Q33DR2 Genevestigator:Q33DR2
GermOnline:ENSMUSG00000026784 Uniprot:Q33DR2
Length = 409
Score = 162 (62.1 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 65/255 (25%), Positives = 116/255 (45%)
Query: 18 RKFPVRCSSLPVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSV 77
++ P CS + + S F L W L + +++ K + + E + + Y
Sbjct: 69 QRTPAMCSCRQTQSGEKY-SDPFKLG--WRDL-KGLYEDIRKELHISTRE-LKDMSEYYF 123
Query: 78 LAKGTKRAP--PVMCVAACELFGVN--RIAAFPTACAL--EMVHAASLIHDDLPCMDDDP 131
KG P V+ AC + N + A + AL EM+H A+L+HDD+ +DD
Sbjct: 124 DGKGKAFRPIIVVLMARACNIHHNNAREMQASQRSIALVAEMIHTATLVHDDV--IDDAS 181
Query: 132 SRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGST 191
SRRG+ + + ++G A+LAGD + + + V+ ++A++
Sbjct: 182 SRRGKHTVNKIWGEKKAVLAGDLILSAASVALAR------IGNTAVVSMLAQVIE----- 230
Query: 192 GMAAGQFLDLEGEPNLVE-FVQ--EKKFGEMSECSA-VCGGF-LAGADDDEIQSLR-RYG 245
+ G+FL L + N E F EK F + + A C + G D + + +YG
Sbjct: 231 DLVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYG 290
Query: 246 RAVGVLYQVVDDILE 260
+ VG+ +Q++DD+L+
Sbjct: 291 KNVGIAFQLIDDVLD 305
>UNIPROTKB|F1RTW8 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GeneTree:ENSGT00530000063378 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 OMA:QQFPELH EMBL:CU571224
Ensembl:ENSSSCT00000012105 Uniprot:F1RTW8
Length = 410
Score = 161 (61.7 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 61/230 (26%), Positives = 105/230 (45%)
Query: 43 KTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAP--PVMCVAACELFGVN 100
K W L + +++ K + + E + E Y KG P V+ AC + N
Sbjct: 92 KLGWRDL-KGLYEDIRKELFISTTE-LKEMSEYYFDGKGKAFRPIIVVLMARACNIHHNN 149
Query: 101 R--IAAFPTACAL--EMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
+ A AL EM+H ASL+HDD+ +DD SRRG+ + + ++G A+LAGD +
Sbjct: 150 SRDMQASQRTIALIAEMIHTASLVHDDV--IDDASSRRGKHTVNKIWGEKKAVLAGDLIL 207
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVE-FVQ--E 213
+ + V+ ++ ++ + G+FL L + N E F E
Sbjct: 208 SAASIALAR------IGNTTVISILTQVIE-----DLVRGEFLQLGSKENENERFAHYLE 256
Query: 214 KKFGEMSECSA-VCGGF-LAGADDDEIQSLR-RYGRAVGVLYQVVDDILE 260
K F + + A C + G D + + +YG+ VG+ +Q++DD+L+
Sbjct: 257 KTFKKTASLIANSCKAVSVLGCPDPAVHEIAYQYGKNVGIAFQLIDDVLD 306
>ZFIN|ZDB-GENE-030131-4430 [details] [associations]
symbol:pdss1 "prenyl (decaprenyl) diphosphate
synthase, subunit 1" species:7955 "Danio rerio" [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016740 "transferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 ZFIN:ZDB-GENE-030131-4430
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
eggNOG:COG0142 GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 CTD:23590
HOVERGEN:HBG054389 KO:K12504 OMA:QQFPELH OrthoDB:EOG4TQM94
EMBL:CR385039 EMBL:BC093175 IPI:IPI00493659 RefSeq:NP_001017656.1
UniGene:Dr.78018 STRING:Q567H1 Ensembl:ENSDART00000040865
GeneID:550349 KEGG:dre:550349 InParanoid:Q567H1 NextBio:20879604
Uniprot:Q567H1
Length = 411
Score = 159 (61.0 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 54/185 (29%), Positives = 87/185 (47%)
Query: 88 VMCVAACELF----GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVY 143
++ AC + GV A A EM+H ASL+HDD+ +DD RRG+ + + V+
Sbjct: 138 ILMARACNVHSNKEGVLLPAQRSIAMISEMIHTASLVHDDV--IDDSDKRRGKNTINNVW 195
Query: 144 GVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL-- 201
G AILAGD + + + V+ V++++ + G+F+ L
Sbjct: 196 GERKAILAGDFILSAASMALAR------IGNTTVVSVLSQVIE-----DLVRGEFMQLGS 244
Query: 202 -EGEPNLVEFVQEKKFGEMSE-----CSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVV 255
E E + EK F + + C AV L +D + + +YGR VG+ +Q+V
Sbjct: 245 KENENERFKHYLEKTFKKTASLIANSCKAV--SILVNSDPEVHEIAYQYGRNVGIAFQLV 302
Query: 256 DDILE 260
DDIL+
Sbjct: 303 DDILD 307
>WB|WBGene00000761 [details] [associations]
symbol:coq-1 species:6239 "Caenorhabditis elegans"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IMP] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0008340 GO:GO:0018991 GO:GO:0040010
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GO:GO:0040011 GO:GO:0040017 GO:GO:0006744 eggNOG:COG0142
GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K12504 EMBL:FO080645
PIR:G87775 PIR:T25573 RefSeq:NP_491588.1 ProteinModelPortal:P91093
SMR:P91093 STRING:P91093 PaxDb:P91093 EnsemblMetazoa:C24A11.9
GeneID:172190 KEGG:cel:CELE_C24A11.9 UCSC:C24A11.9 CTD:172190
WormBase:C24A11.9 InParanoid:P91093 OMA:PNRNEST NextBio:874409
Uniprot:P91093
Length = 393
Score = 148 (57.2 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 41/159 (25%), Positives = 79/159 (49%)
Query: 112 EMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHL 171
EM+H ASL+HDD+ +D+ +RRG S + V+G +++L GD + Q + S
Sbjct: 143 EMIHTASLVHDDV--IDEANTRRGSASVNAVWGNKMSVLVGDFILARATQILCS------ 194
Query: 172 VPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN-------LVEFVQE--KKFGEMSEC 222
+ +P ++ V+A I + G+F+ + P + ++++ +K +
Sbjct: 195 IGKPNIISVMASIIE-----DLVLGEFMQMSTTPTDATPVDRMKAYIEKTHRKTASLFAS 249
Query: 223 SAVCGGFLAGADDDEIQSLR-RYGRAVGVLYQVVDDILE 260
S LA D ++ + YGR +G+ +Q+ DD+L+
Sbjct: 250 SCRSAAILADGSDLKLHEIAFEYGRNLGIAFQLADDLLD 288
>CGD|CAL0005672 [details] [associations]
symbol:orf19.7478 species:5476 "Candida albicans" [GO:0032476
"decaprenyl diphosphate synthase complex" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019418 "sulfide oxidation"
evidence=IEA] [GO:0070219 "cellular sulfide ion homeostasis"
evidence=IEA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IEA] [GO:0016209 "antioxidant activity" evidence=IEA]
[GO:0008834 "di-trans,poly-cis-decaprenylcistransferase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0000010 "trans-hexaprenyltranstransferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 CGD:CAL0005672 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 eggNOG:COG0142
KO:K05355 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
EMBL:AACQ01000039 RefSeq:XP_718635.1 ProteinModelPortal:Q5AAL1
STRING:Q5AAL1 GeneID:3639664 KEGG:cal:CaO19.7478 Uniprot:Q5AAL1
Length = 510
Score = 107 (42.7 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 111 LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
+EM+H ASL+HDD+ + D SRRG+PS + + +A+LAGD L
Sbjct: 204 VEMIHTASLLHDDVIDLSD--SRRGRPSGNIAFTNKMAVLAGDFL 246
Score = 83 (34.3 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 17/42 (40%), Positives = 29/42 (69%)
Query: 219 MSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILE 260
MS+ S L+GA DD I++ ++GR +G+ +Q+VDD+L+
Sbjct: 366 MSK-SCRAAAVLSGAQDDIIENCYQFGRNLGLCFQIVDDMLD 406
>DICTYBASE|DDB_G0280293 [details] [associations]
symbol:coq1 "trans-prenyltransferase" species:44689
"Dictyostelium discoideum" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0006743 "ubiquinone metabolic process"
evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISS] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00232
dictyBase:DDB_G0280293 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GenomeReviews:CM000152_GR
GO:GO:0046872 EMBL:AAFI02000035 GO:GO:0006744 eggNOG:COG0142
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0006743 RefSeq:XP_641356.1 HSSP:Q9WY08
ProteinModelPortal:Q54VJ9 STRING:Q54VJ9 EnsemblProtists:DDB0231590
GeneID:8622490 KEGG:ddi:DDB_G0280293 OMA:RIRPTIV Uniprot:Q54VJ9
Length = 456
Score = 144 (55.7 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 52/186 (27%), Positives = 91/186 (48%)
Query: 80 KGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPS- 138
KG + P ++ + + L + A +EM+H ASL+HDD+ +D+ +RR S
Sbjct: 181 KGKRIRPTIVLLLSKALSSTVHGSQLKLAEIVEMIHTASLVHDDV--IDEASTRRDVISI 238
Query: 139 NHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQF 198
NH+ Y +AIL GD L L +V T + P V ++ A+ + G+F
Sbjct: 239 NHS-YTNKLAILCGDYL--LARASVVLST----IRNPDVTECMST---ALAE--LVEGEF 286
Query: 199 LDLE--GEPNLVEFVQEK--KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQV 254
+ + G + ++Q+ K G + S L+GAD + I +G+ +G+ +Q+
Sbjct: 287 MQAKSNGVVSFDNYLQKTYLKTGSLITNSCRSAAILSGADSNIINISTEFGKNLGLAFQI 346
Query: 255 VDDILE 260
VDD+L+
Sbjct: 347 VDDLLD 352
>SGD|S000000207 [details] [associations]
symbol:COQ1 "Hexaprenyl pyrophosphate synthetase"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IEA;IMP;IDA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IEA;IMP] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0000010 "trans-hexaprenyltranstransferase
activity" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00232 SGD:S000000207
GO:GO:0005739 GO:GO:0005743 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 EMBL:BK006936 GO:GO:0006744
EMBL:J05547 EMBL:Z35872 EMBL:AY558099 EMBL:Z26494 PIR:A36625
RefSeq:NP_009557.1 ProteinModelPortal:P18900 SMR:P18900
DIP:DIP-1103N IntAct:P18900 MINT:MINT-427151 STRING:P18900
PaxDb:P18900 PRIDE:P18900 EnsemblFungi:YBR003W GeneID:852288
KEGG:sce:YBR003W CYGD:YBR003w eggNOG:COG0142
GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104 KO:K05355
OMA:RASSIFA OrthoDB:EOG4HB1V2 BioCyc:MetaCyc:MONOMER-13702
BRENDA:2.5.1.33 NextBio:970928 Genevestigator:P18900
GermOnline:YBR003W GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 Uniprot:P18900
Length = 473
Score = 111 (44.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 31/92 (33%), Positives = 52/92 (56%)
Query: 111 LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPH 170
+EM+H ASL+HDD+ +D +RRG+PS + + +A+LAGD F LG + VS + H
Sbjct: 182 VEMIHTASLLHDDV--IDHSDTRRGRPSGNAAFTNKMAVLAGD--FLLG-RATVSISRLH 236
Query: 171 LVPEPRVLRVIAEIARAVGSTGMAAGQFLDLE 202
P V+ +++ + G+F+ L+
Sbjct: 237 ---NPEVVELMSN-----SIANLVEGEFMQLK 260
Score = 72 (30.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 223 SAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILE 260
S C L+GA I +GR +G+ +Q+VDD+L+
Sbjct: 331 SCRCAAILSGASPAVIDECYDFGRNLGICFQLVDDMLD 368
>FB|FBgn0051005 [details] [associations]
symbol:qless "qless" species:7227 "Drosophila melanogaster"
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0033554 "cellular response to stress"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0014019 "neuroblast development"
evidence=IMP] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 EMBL:AE014297 GO:GO:0043066 GO:GO:0033554
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0014019
GeneTree:ENSGT00530000063378 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K12504 OMA:KPSVNAL
FlyBase:FBgn0051005 EMBL:BT044087 RefSeq:NP_733425.1
UniGene:Dm.5492 SMR:Q9V9Z3 IntAct:Q9V9Z3 MINT:MINT-1009288
STRING:Q9V9Z3 EnsemblMetazoa:FBtr0085769 GeneID:43697
KEGG:dme:Dmel_CG31005 UCSC:CG31005-RA CTD:43697 InParanoid:Q9V9Z3
GenomeRNAi:43697 NextBio:835306 Uniprot:Q9V9Z3
Length = 436
Score = 133 (51.9 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 44/160 (27%), Positives = 79/160 (49%)
Query: 112 EMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHL 171
EMVH+ASL+HDD+ +D RRG+PS + ++ +AGD + + I
Sbjct: 191 EMVHSASLVHDDV--IDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIAR------ 242
Query: 172 VPEPRVLRVIAEIARAVGSTGMAAGQFLDL---EGE-PNLVEFVQE--KKFGEMSECSAV 225
+ V V+++I T + G+F+ L E E ++ + +K + +
Sbjct: 243 LRSDDVTIVLSQIL-----TDLVQGEFMQLGSRETENERFAHYLTKTYRKTASLIANALK 297
Query: 226 CGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT 265
+A ADD+ + +YGR +G+ +Q+VDD+L+ + T
Sbjct: 298 ATAVIAQADDNVAEVAFQYGRNIGLAFQLVDDMLDFVSST 337
>POMBASE|SPBPJ4664.01 [details] [associations]
symbol:dps1 "decaprenyl diphosphate synthase subunit
Dps1" species:4896 "Schizosaccharomyces pombe" [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IC] [GO:0006119 "oxidative phosphorylation"
evidence=TAS] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0016209 "antioxidant activity" evidence=IMP]
[GO:0019418 "sulfide oxidation" evidence=IMP] [GO:0019646 "aerobic
electron transport chain" evidence=TAS] [GO:0032476 "decaprenyl
diphosphate synthase complex" evidence=IPI] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] [GO:0070219 "cellular sulfide ion
homeostasis" evidence=IMP] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=IMP]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00232 PomBase:SPBPJ4664.01 GO:GO:0005743
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0016740 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016209
GO:GO:0019646 GO:GO:0070219 GO:GO:0006119 GO:GO:0019418
GO:GO:0006744 eggNOG:COG0142 HOGENOM:HOG000009104 KO:K05355
OrthoDB:EOG4HB1V2 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0032476 EMBL:D84311 EMBL:D89265 PIR:JC5429
PIR:T43193 RefSeq:NP_595276.1 ProteinModelPortal:O43091
STRING:O43091 EnsemblFungi:SPBPJ4664.01.1 GeneID:2541402
KEGG:spo:SPBPJ4664.01 OMA:KPSVNAL NextBio:20802509 Uniprot:O43091
Length = 378
Score = 131 (51.2 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 45/161 (27%), Positives = 78/161 (48%)
Query: 112 EMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHL 171
EM+H ASL+HDD+ +D RRG PS++ +G +ILAG+ + + T
Sbjct: 127 EMIHIASLLHDDV--IDHANVRRGSPSSNVAFGNRRSILAGNFILAR------ASTAMAR 178
Query: 172 VPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG--EPNLVEFVQ-------EKKFGEMSEC 222
+ P+V ++A + + G+FL L+ +P+ +E Q EK F + +
Sbjct: 179 LRNPQVTELLATVI-----ADLVRGEFLQLKNTMDPSSLEIKQSNFDYYIEKSFLKTASL 233
Query: 223 -SAVC-GGFLAGADDDEIQSLR-RYGRAVGVLYQVVDDILE 260
S C + G + + YGR +G +Q++DD+L+
Sbjct: 234 ISKSCKASTILGQCSPTVATAAGEYGRCIGTAFQLMDDVLD 274
>ASPGD|ASPL0000038406 [details] [associations]
symbol:AN10340 species:162425 "Emericella nidulans"
[GO:0032476 "decaprenyl diphosphate synthase complex" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0016209 "antioxidant
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=IEA]
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0019418 "sulfide oxidation" evidence=IEA]
[GO:0070219 "cellular sulfide ion homeostasis" evidence=IEA]
[GO:0006744 "ubiquinone biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:BN001306
GO:GO:0006744 HOGENOM:HOG000009104 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 ProteinModelPortal:C8VJN5
EnsemblFungi:CADANIAT00010341 OMA:YLHKTYL Uniprot:C8VJN5
Length = 456
Score = 132 (51.5 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 45/157 (28%), Positives = 76/157 (48%)
Query: 112 EMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHL 171
E++H ASL+HDD+ +D+ +RR S + +G +A+LAGD F LG +
Sbjct: 204 ELIHTASLLHDDV--IDNALTRRSSNSANIEFGNKMAVLAGD--FLLGRASVALAR---- 255
Query: 172 VPEPRVLRVIAE-IARAVGSTGMAAGQFLDLEGEPNLVE-----FVQEKKFGEMSECSAV 225
+ +P V ++A IA V M + E P + ++Q+ S S
Sbjct: 256 LRDPEVTELLATVIANLVEGEFMQLKNTAEDEKNPVFTDDTISYYLQKTYLKTASLISKS 315
Query: 226 C--GGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILE 260
C L + D +++ YGR +G+ +Q+VDD+L+
Sbjct: 316 CRAAALLGHSTPDVVEAAYSYGRNLGLAFQLVDDMLD 352
>TAIR|locus:2062315 [details] [associations]
symbol:GPS1 "geranyl diphosphate synthase 1" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0004161 "dimethylallyltranstransferase activity"
evidence=IGI;IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0009536 "plastid" evidence=IDA] [GO:0009790 "embryo
development" evidence=IMP] [GO:0004659 "prenyltransferase activity"
evidence=IDA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IMP] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005739 GO:GO:0009507
EMBL:CP002685 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0006744 GO:GO:0009790 EMBL:AC004077
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347 GO:GO:0004659
OMA:KPSVNAL GO:GO:0052924 EMBL:Y17376 EMBL:AY093006 EMBL:BT020524
IPI:IPI00537358 IPI:IPI00538487 IPI:IPI00657038 PIR:A84759
RefSeq:NP_001031483.1 RefSeq:NP_850234.1 UniGene:At.25503 PDB:3APZ
PDB:3AQ0 PDBsum:3APZ PDBsum:3AQ0 ProteinModelPortal:Q5HZ00
SMR:Q5HZ00 STRING:Q5HZ00 PRIDE:Q5HZ00 EnsemblPlants:AT2G34630.2
GeneID:818028 KEGG:ath:AT2G34630 TAIR:At2g34630 InParanoid:Q8RWM1
KO:K14066 ProtClustDB:PLN02890 EvolutionaryTrace:Q9FT89
Genevestigator:Q5HZ00 Uniprot:Q5HZ00
Length = 422
Score = 127 (49.8 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 46/155 (29%), Positives = 76/155 (49%)
Query: 112 EMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHL 171
EM+H ASL+HDD+ +DD +RRG S + V G +++LAGD L +S L
Sbjct: 171 EMIHVASLLHDDV--LDDADTRRGVGSLNVVMGNKMSVLAGDFL--------LSRACGAL 220
Query: 172 VPEPRVLRVIAEIARAVGSTGMAAGQFLDL----EGEPNLVEFVQEKKFGEMSECSAVCG 227
V+A +A AV + G+ +++ E ++ ++Q+ + S S C
Sbjct: 221 AALKNT-EVVALLATAVEH--LVTGETMEITSSTEQRYSMDYYMQKTYYKTASLISNSCK 277
Query: 228 GF--LAGADDDEIQSLRRYGRAVGVLYQVVDDILE 260
L G + YGR +G+ +Q++DDIL+
Sbjct: 278 AVAVLTGQTAEVAVLAFEYGRNLGLAFQLIDDILD 312
>GENEDB_PFALCIPARUM|PFB0130w [details] [associations]
symbol:PFB0130w "polyprenyl synthetase,
putative" species:5833 "Plasmodium falciparum" [GO:0004659
"prenyltransferase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE001362
GenomeReviews:AE001362_GR OMA:RASSIFA GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004659 PIR:F71622
RefSeq:XP_001349541.1 ProteinModelPortal:O96130
EnsemblProtists:PFB0130w:mRNA GeneID:812623 KEGG:pfa:PFB0130w
EuPathDB:PlasmoDB:PF3D7_0202700 HOGENOM:HOG000284224
ProtClustDB:CLSZ2432854 Uniprot:O96130
Length = 538
Score = 115 (45.5 bits), Expect = 0.00086, P = 0.00086
Identities = 41/155 (26%), Positives = 69/155 (44%)
Query: 110 ALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPP 169
A E++H SL+HDD+ +DD RRG + H +G I+IL+GD L I + T
Sbjct: 272 ASEIIHMGSLLHDDV--IDDSNKRRGVIALHKKFGNKISILSGDYLLARA-SSIFAGTG- 327
Query: 170 HLVPEPRVLRVIAEIARAV--GSTGMAAGQFLDLEGEPNLVEFVQEKKFGEMSECSAVCG 227
P++ R + + ++ G +F ++E + K + C
Sbjct: 328 ----SPKICRSFSYVVESLIKGEFLQRNLKFNNVEEALKMYLIKSYHKTASLFSHLFACI 383
Query: 228 GFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAK 262
L+ +D IQ G +G+ +Q+ DD L+ K
Sbjct: 384 AILSFKNDTIIQLCFNLGLHIGMAFQLYDDYLDYK 418
>UNIPROTKB|O96130 [details] [associations]
symbol:OPP "Octaprenyl pyrophosphate synthase"
species:36329 "Plasmodium falciparum 3D7" [GO:0004659
"prenyltransferase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE001362
GenomeReviews:AE001362_GR OMA:RASSIFA GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004659 PIR:F71622
RefSeq:XP_001349541.1 ProteinModelPortal:O96130
EnsemblProtists:PFB0130w:mRNA GeneID:812623 KEGG:pfa:PFB0130w
EuPathDB:PlasmoDB:PF3D7_0202700 HOGENOM:HOG000284224
ProtClustDB:CLSZ2432854 Uniprot:O96130
Length = 538
Score = 115 (45.5 bits), Expect = 0.00086, P = 0.00086
Identities = 41/155 (26%), Positives = 69/155 (44%)
Query: 110 ALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPP 169
A E++H SL+HDD+ +DD RRG + H +G I+IL+GD L I + T
Sbjct: 272 ASEIIHMGSLLHDDV--IDDSNKRRGVIALHKKFGNKISILSGDYLLARA-SSIFAGTG- 327
Query: 170 HLVPEPRVLRVIAEIARAV--GSTGMAAGQFLDLEGEPNLVEFVQEKKFGEMSECSAVCG 227
P++ R + + ++ G +F ++E + K + C
Sbjct: 328 ----SPKICRSFSYVVESLIKGEFLQRNLKFNNVEEALKMYLIKSYHKTASLFSHLFACI 383
Query: 228 GFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAK 262
L+ +D IQ G +G+ +Q+ DD L+ K
Sbjct: 384 AILSFKNDTIIQLCFNLGLHIGMAFQLYDDYLDYK 418
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.137 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 334 313 0.00081 116 3 11 22 0.36 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 79
No. of states in DFA: 603 (64 KB)
Total size of DFA: 208 KB (2116 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.80u 0.08s 22.88t Elapsed: 00:00:01
Total cpu time: 22.81u 0.08s 22.89t Elapsed: 00:00:01
Start: Fri May 10 13:35:11 2013 End: Fri May 10 13:35:12 2013