BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019903
(334 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255577858|ref|XP_002529802.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223530713|gb|EEF32584.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
Length = 345
Score = 529 bits (1363), Expect = e-148, Method: Compositional matrix adjust.
Identities = 257/342 (75%), Positives = 295/342 (86%), Gaps = 13/342 (3%)
Query: 1 MIFSSALLANP-PCVCLPRKFP-----------VRCSSLPVSAASQLRSTQFDLKTYWTT 48
MIF S++ ++P P + LPRK P ++C S VS +SQ +STQFDLKTYWTT
Sbjct: 1 MIFFSSVSSSPAPALYLPRKTPNVHHLSKLGIRIQCCSPTVSVSSQSKSTQFDLKTYWTT 60
Query: 49 LITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTA 108
LI EI+Q L++AI V++PEQIYE+MRYS LAKG KRAPPVMCVAACELFG NR+AAFPTA
Sbjct: 61 LIAEINQKLDQAIPVQFPEQIYEAMRYSALAKGAKRAPPVMCVAACELFGGNRLAAFPTA 120
Query: 109 CALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTP 168
CALEMVH ASLIHDDLPCMDDDPSRRGQPSNHT+YGVD+AILAGDALFPLG++HIVSHTP
Sbjct: 121 CALEMVHTASLIHDDLPCMDDDPSRRGQPSNHTIYGVDMAILAGDALFPLGYRHIVSHTP 180
Query: 169 PHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEMSECSAVCGG 228
LVPEPR+LRVIAEIARAVGSTGMAAGQFLDLEG P+ VEF QEKK+GEMSECSAVCGG
Sbjct: 181 TGLVPEPRLLRVIAEIARAVGSTGMAAGQFLDLEGGPSFVEFAQEKKYGEMSECSAVCGG 240
Query: 229 FLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVAFYGVEKA 288
LAGA+DDEIQ LRRYGRAVGVLYQV+DD+LEAKA +EE K++ GKSYV+ YG+EKA
Sbjct: 241 LLAGAEDDEIQRLRRYGRAVGVLYQVIDDVLEAKAMNKENEE-KRRNGKSYVSLYGIEKA 299
Query: 289 MEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADREFSV 330
MEVAEELR +AK+ELD F KYGD+V+PLYSF+DYAADR F++
Sbjct: 300 MEVAEELRTQAKKELDGFAKYGDSVMPLYSFVDYAADRGFTI 341
>gi|224103129|ref|XP_002312936.1| predicted protein [Populus trichocarpa]
gi|222849344|gb|EEE86891.1| predicted protein [Populus trichocarpa]
Length = 314
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 251/314 (79%), Positives = 281/314 (89%), Gaps = 4/314 (1%)
Query: 21 PVRCSSLPVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAK 80
P++CS +S ++ ++ QFDLKTYWTTLI EI+Q L++A+ ++YP++IYE+MRYSVLAK
Sbjct: 3 PIQCS---LSVSTHSKTPQFDLKTYWTTLILEINQKLDQAVPIQYPDKIYEAMRYSVLAK 59
Query: 81 GTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNH 140
G KRAPPVMCVAACELFG NR AAFPTACALEMVH+ASLIHDDLPCMDDDPSRRGQPSNH
Sbjct: 60 GAKRAPPVMCVAACELFGGNRHAAFPTACALEMVHSASLIHDDLPCMDDDPSRRGQPSNH 119
Query: 141 TVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLD 200
+YGVD+AILAGDALFPLGF+HIVSHTP LVPEPR+L VIAEIARAVGSTGMAAGQFLD
Sbjct: 120 KIYGVDMAILAGDALFPLGFRHIVSHTPSDLVPEPRLLSVIAEIARAVGSTGMAAGQFLD 179
Query: 201 LEGEPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILE 260
LEG PN VEFVQEKKFGEM ECSAVCGG LAGA DDEIQ LRRYGRAVGVLYQVVDDILE
Sbjct: 180 LEGGPNSVEFVQEKKFGEMGECSAVCGGLLAGAKDDEIQRLRRYGRAVGVLYQVVDDILE 239
Query: 261 AKAQTPR-DEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSF 319
AK + DE+KKK+KGKSYVA YGVEKA+EVAEELRAKAKEELD F+KYG++VLPLYSF
Sbjct: 240 AKTMKSKVDEDKKKRKGKSYVALYGVEKAIEVAEELRAKAKEELDGFEKYGESVLPLYSF 299
Query: 320 IDYAADREFSVVDS 333
+DYAADR FS +S
Sbjct: 300 VDYAADRGFSFGES 313
>gi|449454249|ref|XP_004144868.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Cucumis sativus]
gi|449508802|ref|XP_004163415.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Cucumis sativus]
Length = 335
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 246/327 (75%), Positives = 277/327 (84%), Gaps = 2/327 (0%)
Query: 5 SALLANPPCVCLPRKFPVRCSSLPVSAAS-QLRSTQFDLKTYWTTLITEIDQNLEKAITV 63
S + A+ RK P+RCSS A S Q +S FDLKTYW LI EI+Q L++A+ +
Sbjct: 4 SLMAASSLTTSFQRKTPIRCSSSSSPALSSQPQSIHFDLKTYWKQLILEINQKLDEAVPL 63
Query: 64 KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDD 123
+YP+QIYE+MRYSVLA+G KRAPPVMCVAACELFGV+R+AAFPTACALEMVH ASLIHDD
Sbjct: 64 QYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLIHDD 123
Query: 124 LPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAE 183
LPCMDDDPSRRGQPSNHTVYGVD+AILAGDALFPLGFQHIVSHTP LVPE R+LRV+AE
Sbjct: 124 LPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRVVAE 183
Query: 184 IARAVGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRR 243
IARAVGS GMAAGQFLDLEG PN VEFVQEKKFGEM++CSAVCGG LAGA+D EIQ LRR
Sbjct: 184 IARAVGSRGMAAGQFLDLEGGPNSVEFVQEKKFGEMAQCSAVCGGLLAGAEDHEIQRLRR 243
Query: 244 YGRAVGVLYQVVDDILEAKAQT-PRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEE 302
YGRAVGVLYQVVDDILE +++ +E K+ KGKSYV YG+EKA EVAEELRAKAK E
Sbjct: 244 YGRAVGVLYQVVDDILEEQSKKLDYTDESKRSKGKSYVEVYGIEKAKEVAEELRAKAKNE 303
Query: 303 LDRFKKYGDNVLPLYSFIDYAADREFS 329
L+ F+KYGD V+PLYSF+DYAADR FS
Sbjct: 304 LEGFEKYGDQVMPLYSFVDYAADRSFS 330
>gi|164605014|dbj|BAF98303.1| geranylgeranyl-diphosphate synthase [Hevea brasiliensis]
Length = 306
Score = 489 bits (1258), Expect = e-136, Method: Compositional matrix adjust.
Identities = 239/304 (78%), Positives = 273/304 (89%)
Query: 29 VSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPV 88
+S + +STQFDLKTYW TLI+EI+Q L++AI ++YPE+IYE+MRYSVLAK TKRAPPV
Sbjct: 1 MSVSGNSKSTQFDLKTYWMTLISEINQKLDQAIPIQYPEEIYEAMRYSVLAKRTKRAPPV 60
Query: 89 MCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIA 148
MC+AACELFG NR+AAFPTACALEMVHAASLIHDDLPCMDD PSRRGQPSNH VYGVD A
Sbjct: 61 MCIAACELFGGNRLAAFPTACALEMVHAASLIHDDLPCMDDAPSRRGQPSNHAVYGVDKA 120
Query: 149 ILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV 208
ILAGDALFPLGF+HIVS+TP LVPEPR+LRVIAEIARAVGSTGMAAGQFLDLEG N
Sbjct: 121 ILAGDALFPLGFRHIVSNTPSDLVPEPRLLRVIAEIARAVGSTGMAAGQFLDLEGSLNSA 180
Query: 209 EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRD 268
EFVQEKK+GEM ECSAVCGG LAGA+DDEIQ LRRYGRAVGVLY+V+DD+LEAK+ + D
Sbjct: 181 EFVQEKKYGEMGECSAVCGGLLAGAEDDEIQRLRRYGRAVGVLYKVIDDVLEAKSMSKED 240
Query: 269 EEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
EE +KKK KSYV+ YGVEKA+EVAEELR KAK+ELD F+KYG++V PLY+F+DYAADR F
Sbjct: 241 EENEKKKAKSYVSLYGVEKAVEVAEELRTKAKKELDGFEKYGESVQPLYNFVDYAADRGF 300
Query: 329 SVVD 332
SV++
Sbjct: 301 SVLE 304
>gi|374639383|gb|AEZ55680.1| geranyl diphosphate synthase small subunit type II.2 [Salvia
miltiorrhiza]
Length = 331
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 246/335 (73%), Positives = 283/335 (84%), Gaps = 15/335 (4%)
Query: 1 MIFSSALLANPPCVCLPR------KFPVRCSSLPVSAASQLRSTQFDLKTYWTTLITEID 54
M+FSS ++ + P VCLP+ + +RCS+ VS FDLKTYWT+LI EID
Sbjct: 1 MLFSS-VITSTPHVCLPKVTRPALRRTIRCSAASVSPG-------FDLKTYWTSLIKEID 52
Query: 55 QNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMV 114
Q L++AI VKYP+QIYE+MRYSVLAKG KRAPPVMCVAACE+FG NR+AAFPTACALEMV
Sbjct: 53 QKLDEAIPVKYPQQIYEAMRYSVLAKGAKRAPPVMCVAACEIFGGNRLAAFPTACALEMV 112
Query: 115 HAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPE 174
H+ASLIHDDLPCMDDDPSRRGQPSNHTV+GVD+AILAGDALFPLGF+HIVSHTP LVP
Sbjct: 113 HSASLIHDDLPCMDDDPSRRGQPSNHTVFGVDMAILAGDALFPLGFRHIVSHTPTDLVPH 172
Query: 175 PRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEMSECSAVCGGFLAGAD 234
R+LRVIAEIARAVGSTGMAAGQFLDLEG PN V+ VQEKKFGEM +CSAVCGG LAGA
Sbjct: 173 TRLLRVIAEIARAVGSTGMAAGQFLDLEGGPNAVDLVQEKKFGEMGQCSAVCGGLLAGAS 232
Query: 235 DDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEE 294
DDEI+ LR+YGRAVG+LY+VVDDI E K Q P +++K K KGKSYV+ YGVEKAMEVAE+
Sbjct: 233 DDEIEHLRKYGRAVGILYEVVDDIRETKLQ-PDEKDKSKSKGKSYVSVYGVEKAMEVAED 291
Query: 295 LRAKAKEELDRFKKYGDNVLPLYSFIDYAADREFS 329
LR++AK+EL+ +KYGD VLPLYSF+DYAADR F
Sbjct: 292 LRSQAKKELESLEKYGDKVLPLYSFVDYAADRYFG 326
>gi|388496908|gb|AFK36520.1| unknown [Medicago truncatula]
Length = 342
Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust.
Identities = 232/316 (73%), Positives = 271/316 (85%), Gaps = 4/316 (1%)
Query: 18 RKFPVRCS-SLPVSAASQLRS--TQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMR 74
R P+RCS + P ++ +RS FDLKTYWT+L+T+I+Q L++AI V++P+QIYE+MR
Sbjct: 23 RILPIRCSMAAPSPSSVSIRSKVVHFDLKTYWTSLMTQINQKLDEAIEVQFPQQIYEAMR 82
Query: 75 YSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRR 134
YS LAKG KR+PPVMC++ACELFG +R+AAFPTACALEMVHAASLIHDDLPCMDD SRR
Sbjct: 83 YSALAKGAKRSPPVMCISACELFGGSRLAAFPTACALEMVHAASLIHDDLPCMDDSLSRR 142
Query: 135 GQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMA 194
GQPSNHT+YGVD+AILAGDALFPLGFQHIVSHTP LVPEPRVLRVIAEIAR VGSTGMA
Sbjct: 143 GQPSNHTIYGVDMAILAGDALFPLGFQHIVSHTPSDLVPEPRVLRVIAEIARCVGSTGMA 202
Query: 195 AGQFLDLEGEPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQV 254
AGQFLDL+G PN V +Q+KKFGEM+ECSAVCGG LAGA+DDEI+ LRRYGRAVGVLY +
Sbjct: 203 AGQFLDLKGGPNAVGLIQDKKFGEMAECSAVCGGLLAGAEDDEIERLRRYGRAVGVLYAI 262
Query: 255 VDDILEAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVL 314
VDDILE + + P ++ ++ GKSYV YGVEKA EVAEELRAKA EELD F+KYGD VL
Sbjct: 263 VDDILEERLK-PEGDKDRENSGKSYVEVYGVEKAAEVAEELRAKALEELDGFEKYGDQVL 321
Query: 315 PLYSFIDYAADREFSV 330
PLYSF++YA DR F+V
Sbjct: 322 PLYSFVNYAIDRSFNV 337
>gi|359474991|ref|XP_003631563.1| PREDICTED: geranylgeranyl pyrophosphate synthase-related protein,
chloroplastic-like isoform 1 [Vitis vinifera]
Length = 341
Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust.
Identities = 244/323 (75%), Positives = 283/323 (87%), Gaps = 4/323 (1%)
Query: 8 LANPPCVCLPRKFPVRCSSLPVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPE 67
L N + LPR +RC+S P + S +S QFDL++YWTTLI+EI+ LE+AI VKYP+
Sbjct: 19 LPNRSSLNLPRT--IRCTS-PSISVSPSKSMQFDLRSYWTTLISEINTKLEEAIPVKYPQ 75
Query: 68 QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCM 127
QIYE+MRYSVLAKG KRAPPVMCVA CELFG +R+AAFPTACALEMVHAASLIHDDLPCM
Sbjct: 76 QIYEAMRYSVLAKGGKRAPPVMCVAVCELFGGDRLAAFPTACALEMVHAASLIHDDLPCM 135
Query: 128 DDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARA 187
DDDPSRRGQPSNHTVYGVD+AILAGDALFPLGF+HIVSHTP HLVPE +++RVIAEIAR+
Sbjct: 136 DDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFRHIVSHTPSHLVPEGQLIRVIAEIARS 195
Query: 188 VGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRA 247
VGSTGMAAGQFLDLEG PN V+FVQ KKFGEM+ECSAVCGGFL GA DD+I LRRYGRA
Sbjct: 196 VGSTGMAAGQFLDLEGAPNSVDFVQRKKFGEMAECSAVCGGFLGGAADDDILRLRRYGRA 255
Query: 248 VGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFK 307
VG+LYQVVDD+L+AK ++ ++E+KKKKGKSYV YG+EKAMEVAEELRAKAK EL F
Sbjct: 256 VGMLYQVVDDVLKAKTKS-EEDEEKKKKGKSYVDVYGMEKAMEVAEELRAKAKRELSGFD 314
Query: 308 KYGDNVLPLYSFIDYAADREFSV 330
KYGD+V+PLYSF+D+AA+R F++
Sbjct: 315 KYGDSVVPLYSFVDFAAERGFTI 337
>gi|325516286|gb|ADZ24721.1| geranylgeranyl pyrophosphate synthase 4 [Solanum pennellii]
Length = 334
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 239/332 (71%), Positives = 280/332 (84%), Gaps = 4/332 (1%)
Query: 1 MIFSSALLANPPCVCLPRKFPVRCSSLP--VSAASQLRSTQFDLKTYWTTLITEIDQNLE 58
M+FS +++ P +CLPR V ++ S ++ S +FDLKTYWTTLI +I+Q L+
Sbjct: 1 MVFS-MVMSFSPSLCLPRSRMVMQKAIQCSSSVSTASESVKFDLKTYWTTLIVDINQKLD 59
Query: 59 KAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAAS 118
+A+ VKYP QIYE+MRYSVLAKG KR+PP+MCVAACELFG NR+AAFPTACALEMVHAAS
Sbjct: 60 EAVPVKYPNQIYEAMRYSVLAKGAKRSPPIMCVAACELFGGNRLAAFPTACALEMVHAAS 119
Query: 119 LIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVL 178
LIHDDLPCMDDD +RRG P+NHTV+GVD+AILAGDALFPLGFQHIVSHTP LVPE R+L
Sbjct: 120 LIHDDLPCMDDDTTRRGLPANHTVFGVDMAILAGDALFPLGFQHIVSHTPSDLVPEDRIL 179
Query: 179 RVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEI 238
RVI EIARAVGSTGMAAGQFLDLEG PN V+FVQEKK+GEM ECSAVCG LAGA D+EI
Sbjct: 180 RVITEIARAVGSTGMAAGQFLDLEGGPNAVDFVQEKKYGEMGECSAVCGALLAGASDEEI 239
Query: 239 QSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAK 298
Q +R+YGRAVGVLY+VVDDILEAK +T E KKKKGKSYV+ YG+EKA++VAE+LRA+
Sbjct: 240 QHMRKYGRAVGVLYRVVDDILEAK-KTEDKTEGKKKKGKSYVSVYGIEKAVKVAEDLRAQ 298
Query: 299 AKEELDRFKKYGDNVLPLYSFIDYAADREFSV 330
AK EL +KYGD V+PLYSF+DYAADR FS+
Sbjct: 299 AKRELVGLEKYGDKVMPLYSFLDYAADRGFSI 330
>gi|359474993|ref|XP_003631564.1| PREDICTED: geranylgeranyl pyrophosphate synthase-related protein,
chloroplastic-like isoform 2 [Vitis vinifera]
Length = 341
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 248/339 (73%), Positives = 286/339 (84%), Gaps = 11/339 (3%)
Query: 1 MIFSSALLANPPCVCLPRKFPVRCS-SLPVS--------AASQLRSTQFDLKTYWTTLIT 51
M F++AL + P L + P R S SLP + + S +S QFDL++YWTTLI+
Sbjct: 1 MAFTTAL-SLPSAARLHHRLPNRSSLSLPRTIRCSSPSISVSPSKSMQFDLRSYWTTLIS 59
Query: 52 EIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACAL 111
EI+ LE+AI VKYP+QIYE+MRYSVLAKG KRAPPVMCVA CELFG +R+AAFPTACAL
Sbjct: 60 EINTKLEEAIPVKYPQQIYEAMRYSVLAKGGKRAPPVMCVAVCELFGGDRLAAFPTACAL 119
Query: 112 EMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHL 171
EMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVD+AILAGDALFPLGF+HIVSHTP HL
Sbjct: 120 EMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFRHIVSHTPSHL 179
Query: 172 VPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEMSECSAVCGGFLA 231
VPE +++RVIAEIAR+VGSTGMAAGQFLDLEG PN V+FVQ KKFGEM+ECSAVCGGFL
Sbjct: 180 VPEGQLIRVIAEIARSVGSTGMAAGQFLDLEGAPNSVDFVQRKKFGEMAECSAVCGGFLG 239
Query: 232 GADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEV 291
GA DD+I LRRYGRAVG+LYQVVDD+L+AK ++ DEEKKKK KSYV YG+EKAMEV
Sbjct: 240 GAADDDILRLRRYGRAVGMLYQVVDDVLKAKTKSEEDEEKKKKG-KSYVDVYGMEKAMEV 298
Query: 292 AEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADREFSV 330
AEELRAKAK EL F KYGD+V+PLYSF+D+AA+R F++
Sbjct: 299 AEELRAKAKRELSGFDKYGDSVVPLYSFVDFAAERGFTI 337
>gi|147776976|emb|CAN70079.1| hypothetical protein VITISV_001037 [Vitis vinifera]
Length = 341
Score = 473 bits (1216), Expect = e-131, Method: Compositional matrix adjust.
Identities = 244/323 (75%), Positives = 279/323 (86%), Gaps = 4/323 (1%)
Query: 8 LANPPCVCLPRKFPVRCSSLPVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPE 67
L N + LPR +RC S + S +S QFDL++YWTTLI+EI+ LE+AI VKYP+
Sbjct: 19 LPNRSSLNLPRT--IRCXSP-SISVSPSKSMQFDLRSYWTTLISEINTKLEEAIPVKYPQ 75
Query: 68 QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCM 127
QIYE+MRYSVLAKG KRAPPVMCVA CELFG +R+AAFPTACALEMVHAASLIHDDLPCM
Sbjct: 76 QIYEAMRYSVLAKGGKRAPPVMCVAVCELFGGDRLAAFPTACALEMVHAASLIHDDLPCM 135
Query: 128 DDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARA 187
DDDPSRRGQPSNHTVYGVD+AILAGDALFPLGF+HIVSHTP HLVPE +++RVIAEIAR+
Sbjct: 136 DDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFRHIVSHTPSHLVPEGQLIRVIAEIARS 195
Query: 188 VGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRA 247
VGSTGMAAGQFLDLEG PN V+FVQ KKFGEM+ECSAVCGGFL GA DD+I LRRYGRA
Sbjct: 196 VGSTGMAAGQFLDLEGAPNSVDFVQRKKFGEMAECSAVCGGFLGGAADDDILRLRRYGRA 255
Query: 248 VGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFK 307
VG+LYQVVDD+L+AK ++ DEEKKKK KSYV YG+EKAMEVAEELRAKAK EL F
Sbjct: 256 VGMLYQVVDDMLKAKTKSEEDEEKKKKG-KSYVDVYGMEKAMEVAEELRAKAKRELSGFD 314
Query: 308 KYGDNVLPLYSFIDYAADREFSV 330
KYGD+V+PLYSF+D+AA+R F++
Sbjct: 315 KYGDSVVPLYSFVDFAAERGFTI 337
>gi|363814567|ref|NP_001242759.1| uncharacterized protein LOC100788186 [Glycine max]
gi|255635048|gb|ACU17882.1| unknown [Glycine max]
Length = 342
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 237/338 (70%), Positives = 274/338 (81%), Gaps = 8/338 (2%)
Query: 3 FSSALLANPPCVCLPR----KFPVRCSSLPVSAASQL---RSTQFDLKTYWTTLITEIDQ 55
F+ A L + LP+ KF VRCS+ S +S ++ FDLKTY L+ +I+Q
Sbjct: 4 FAFATLPSSHICRLPKPTNLKFRVRCSTAASSPSSVSTRSKAAGFDLKTYCANLMVQINQ 63
Query: 56 NLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVH 115
L++AI V++P QIYE+MRYSVLAKG KRAPPVMC++ACELFG +R+AAFPTACALEMVH
Sbjct: 64 KLDEAIPVQFPPQIYEAMRYSVLAKGAKRAPPVMCISACELFGGSRLAAFPTACALEMVH 123
Query: 116 AASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEP 175
AASLIHDDLPCMDD PSRRGQPSNHT+YGVD+AILAGDALFPLGF+HIVS TP LVPE
Sbjct: 124 AASLIHDDLPCMDDSPSRRGQPSNHTIYGVDMAILAGDALFPLGFRHIVSQTPSDLVPES 183
Query: 176 RVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEMSECSAVCGGFLAGADD 235
+LRVIAEIAR+VGSTGMAAGQFLDLEG PN V F+QEKKFGEM E SAVCGGFLAGA+D
Sbjct: 184 HLLRVIAEIARSVGSTGMAAGQFLDLEGGPNAVGFIQEKKFGEMGESSAVCGGFLAGAED 243
Query: 236 DEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEEL 295
DEI+ LRRYGRAVGVLY VVDDI+E + + D +K KGKSY YGVEKA+E AEEL
Sbjct: 244 DEIERLRRYGRAVGVLYAVVDDIIEERLKVEGD-GNRKNKGKSYAEVYGVEKAIEKAEEL 302
Query: 296 RAKAKEELDRFKKYGDNVLPLYSFIDYAADREFSVVDS 333
RAKAKEELD F+K+G+ VLPLYSF+DYA DR FSV D+
Sbjct: 303 RAKAKEELDGFEKHGERVLPLYSFVDYAFDRSFSVDDA 340
>gi|297744549|emb|CBI37811.3| unnamed protein product [Vitis vinifera]
Length = 1187
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/323 (70%), Positives = 259/323 (80%), Gaps = 32/323 (9%)
Query: 8 LANPPCVCLPRKFPVRCSSLPVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPE 67
L N + LPR +RC+S P + S +S QFDL++YWTTLI+EI+ LE+AI VKYP+
Sbjct: 276 LPNRSSLNLPRT--IRCTS-PSISVSPSKSMQFDLRSYWTTLISEINTKLEEAIPVKYPQ 332
Query: 68 QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCM 127
QIYE+MRYSVLAKG KRAPPVMCVA CELFG +R+AAFPTACALEMVHAASLIHDDLPCM
Sbjct: 333 QIYEAMRYSVLAKGGKRAPPVMCVAVCELFGGDRLAAFPTACALEMVHAASLIHDDLPCM 392
Query: 128 DDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARA 187
DDDPSRRGQPSNHTVYGVD+AILAGDALFPLGF+HIVSHTP HLVPE +++RVIAEIAR+
Sbjct: 393 DDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFRHIVSHTPSHLVPEGQLIRVIAEIARS 452
Query: 188 VGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRA 247
VGSTGMAAGQFLDLEG PN V+FVQ KKFGEM+ECSAVCGGFL GA DD+I LRRYGRA
Sbjct: 453 VGSTGMAAGQFLDLEGAPNSVDFVQRKKFGEMAECSAVCGGFLGGAADDDILRLRRYGRA 512
Query: 248 VGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFK 307
VG+LYQVVDD KAMEVAEELRAKAK EL F
Sbjct: 513 VGMLYQVVDD-----------------------------KAMEVAEELRAKAKRELSGFD 543
Query: 308 KYGDNVLPLYSFIDYAADREFSV 330
KYGD+V+PLYSF+D+AA+R F++
Sbjct: 544 KYGDSVVPLYSFVDFAAERGFTI 566
>gi|358343453|ref|XP_003635816.1| hypothetical protein MTR_011s1001, partial [Medicago truncatula]
gi|355501751|gb|AES82954.1| hypothetical protein MTR_011s1001, partial [Medicago truncatula]
Length = 277
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 211/273 (77%), Positives = 241/273 (88%), Gaps = 1/273 (0%)
Query: 58 EKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAA 117
++AI V++P+QIYE+MRYS LAKG KR+PPVMC++ACELFG +R+AAFPTACALEMVHAA
Sbjct: 1 DEAIEVQFPQQIYEAMRYSALAKGAKRSPPVMCISACELFGGSRLAAFPTACALEMVHAA 60
Query: 118 SLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRV 177
SLIHDDLPCMDD SRRGQPSNHT+YGVD+AILAGDALFPLGFQHIVSHTP LVPEPRV
Sbjct: 61 SLIHDDLPCMDDSLSRRGQPSNHTIYGVDMAILAGDALFPLGFQHIVSHTPSDLVPEPRV 120
Query: 178 LRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDE 237
LRVIAEIAR VGSTGMAAGQFLDL+G PN V +Q+KKFGEM+ECSAVCGG LAGA+DDE
Sbjct: 121 LRVIAEIARCVGSTGMAAGQFLDLKGGPNAVGLIQDKKFGEMAECSAVCGGLLAGAEDDE 180
Query: 238 IQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEELRA 297
I+ LRRYGRAVGVLY +VDDILE + + P ++ ++ GKSYV YGVEKA EVAEELRA
Sbjct: 181 IERLRRYGRAVGVLYAIVDDILEERLK-PEGDKDRENSGKSYVEVYGVEKAAEVAEELRA 239
Query: 298 KAKEELDRFKKYGDNVLPLYSFIDYAADREFSV 330
KA EELD F+KYGD VLPLYSF++YA DR F+V
Sbjct: 240 KALEELDGFEKYGDQVLPLYSFVNYAIDRSFNV 272
>gi|15233848|ref|NP_195558.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana]
gi|85680919|sp|Q39108.2|GGR_ARATH RecName: Full=Heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic; Flags: Precursor
gi|11908118|gb|AAG41488.1|AF326906_1 putative geranylgeranyl pyrophosphate synthase-related protein
[Arabidopsis thaliana]
gi|12642930|gb|AAK00407.1|AF339725_1 putative geranylgeranyl pyrophosphate synthase-related protein
[Arabidopsis thaliana]
gi|13926334|gb|AAK49631.1|AF372915_1 AT4g38460/F20M13_20 [Arabidopsis thaliana]
gi|4467133|emb|CAB37502.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
thaliana]
gi|7270829|emb|CAB80510.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
thaliana]
gi|16323260|gb|AAL15364.1| AT4g38460/F20M13_20 [Arabidopsis thaliana]
gi|21555524|gb|AAM63877.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
thaliana]
gi|332661530|gb|AEE86930.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana]
Length = 326
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/337 (64%), Positives = 253/337 (75%), Gaps = 24/337 (7%)
Query: 1 MIFSSALLANPPCVCLPRK---FPVRCSSLPVSAASQLR--STQFDLKTYWTTLITEIDQ 55
M+FS + + LP K P++ S + ++S S FDL+TYWTTLITEI+Q
Sbjct: 1 MLFSGSAIPLSSFCSLPEKPHTLPMKLSPAAIRSSSSSAPGSLNFDLRTYWTTLITEINQ 60
Query: 56 NLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVH 115
L++AI VK+P IYE+MRYSVLA+G KRAPPVMCVAACELFG +R+AAFPTACALEMVH
Sbjct: 61 KLDEAIPVKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFGGDRLAAFPTACALEMVH 120
Query: 116 AASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEP 175
AASLIHDDLPCMDDDP RRG+PSNHTVYG +AILAGDALFPL FQHIVSHTPP LVP
Sbjct: 121 AASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHIVSHTPPDLVPRA 180
Query: 176 RVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEMSECSAVCGGFLAGADD 235
+LR+I EIAR VGSTGMAAGQ++DLEG P + FVQEKKFG M ECSAVCGG L GA +
Sbjct: 181 TILRLITEIARTVGSTGMAAGQYVDLEGGPFPLSFVQEKKFGAMGECSAVCGGLLGGATE 240
Query: 236 DEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVAFYGVEKA-MEVAEE 294
DE+QSLRRYGRAVG+LYQVVDDI E K KK G G EK ME+AEE
Sbjct: 241 DELQSLRRYGRAVGMLYQVVDDITEDK--------KKSYDG-------GAEKGMMEMAEE 285
Query: 295 LRAKAKEELDRF-KKY--GDNVLPLYSFIDYAADREF 328
L+ KAK+EL F KY GD ++PLY+F+DYAA R F
Sbjct: 286 LKEKAKKELQVFDNKYGGGDTLVPLYTFVDYAAHRHF 322
>gi|11692820|gb|AAG40013.1|AF324662_1 AT4g38460 [Arabidopsis thaliana]
Length = 326
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/337 (64%), Positives = 252/337 (74%), Gaps = 24/337 (7%)
Query: 1 MIFSSALLANPPCVCLPRK---FPVRCSSLPVSAASQLR--STQFDLKTYWTTLITEIDQ 55
M+FS + + LP K P++ S + ++S S FDL+TYWTTLITEI+Q
Sbjct: 1 MLFSGSAIPLSSFCSLPEKPHTLPMKLSPAAIRSSSSSAPGSLNFDLRTYWTTLITEINQ 60
Query: 56 NLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVH 115
L++AI VK+P IYE+MRYSVLA+G KRAPPVMCVAACELFG +R+AAFPTACALEMVH
Sbjct: 61 KLDEAIPVKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFGGDRLAAFPTACALEMVH 120
Query: 116 AASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEP 175
AASLIHDDLPCMDDDP RRG+PSNHTVYG +AILAGDALFPL FQHIVSHTPP LVP
Sbjct: 121 AASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHIVSHTPPDLVPRA 180
Query: 176 RVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEMSECSAVCGGFLAGADD 235
+LR+I EIAR VGSTGMAAGQ++DLEG P + FVQEKKFG M ECSAVCGG L GA +
Sbjct: 181 TILRLITEIARTVGSTGMAAGQYVDLEGGPFPLSFVQEKKFGAMGECSAVCGGLLGGATE 240
Query: 236 DEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVAFYGVEKA-MEVAEE 294
DE+QSLRRYGRAVG+LYQVVDDI E K KK G G EK ME+AEE
Sbjct: 241 DELQSLRRYGRAVGMLYQVVDDITEDK--------KKSYDG-------GAEKGMMEMAEE 285
Query: 295 LRAKAKEELDRF-KKY--GDNVLPLYSFIDYAADREF 328
L+ KAK+EL F KY GD ++PLY+F+DY A R F
Sbjct: 286 LKEKAKKELQVFDNKYGGGDTLVPLYTFVDYEAHRHF 322
>gi|735880|gb|AAA81879.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
thaliana]
Length = 326
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/337 (64%), Positives = 252/337 (74%), Gaps = 24/337 (7%)
Query: 1 MIFSSALLANPPCVCLPRK---FPVRCSSLPVSAASQLR--STQFDLKTYWTTLITEIDQ 55
M+FS + + LP K P++ S + ++S S FDL+TYWTTLITEI+Q
Sbjct: 1 MLFSGSAIPLSSFCSLPEKPHTLPMKLSPAAIRSSSSSAPGSLNFDLRTYWTTLITEINQ 60
Query: 56 NLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVH 115
L++AI VK+P IYE+MRYSVL +G KRAPPVMCVAACELFG +R+AAFPTACALEMVH
Sbjct: 61 KLDEAIPVKHPAGIYEAMRYSVLPQGPKRAPPVMCVAACELFGGDRLAAFPTACALEMVH 120
Query: 116 AASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEP 175
AASLIHDDLPCMDDDP RRG+PSNHTVYG +AILAGDALFPL FQHIVSHTPP LVP
Sbjct: 121 AASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHIVSHTPPDLVPRA 180
Query: 176 RVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEMSECSAVCGGFLAGADD 235
+LR+I EIAR VGSTGMAAGQ++DLEG P + FVQEKKFG M ECSAVCGG L GA +
Sbjct: 181 TILRLITEIARTVGSTGMAAGQYVDLEGGPFPLSFVQEKKFGAMGECSAVCGGLLGGATE 240
Query: 236 DEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVAFYGVEKA-MEVAEE 294
DE+QSLRRYGRAVG+LYQVVDDI E K KK G G EK ME+AEE
Sbjct: 241 DELQSLRRYGRAVGMLYQVVDDITEDK--------KKSYDG-------GAEKGMMEMAEE 285
Query: 295 LRAKAKEELDRF-KKY--GDNVLPLYSFIDYAADREF 328
L+ KAK+EL F KY GD ++PLY+F+DYAA R F
Sbjct: 286 LKEKAKKELQVFDNKYGGGDTLVPLYTFVDYAAHRHF 322
>gi|297797830|ref|XP_002866799.1| hypothetical protein ARALYDRAFT_912293 [Arabidopsis lyrata subsp.
lyrata]
gi|297312635|gb|EFH43058.1| hypothetical protein ARALYDRAFT_912293 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/293 (69%), Positives = 230/293 (78%), Gaps = 22/293 (7%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
FDL+TYWTTLITEI+Q L++AI VK+P IYE+MRYSVLA+G KRA PVMCVAACELFG
Sbjct: 33 NFDLRTYWTTLITEINQKLDEAIPVKHPAGIYEAMRYSVLAQGAKRASPVMCVAACELFG 92
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
+R+AAFPTACALEMVHAASLIHDDLPCMDDDP RRG+PSNHTVYG IA+LAGDALFPL
Sbjct: 93 GDRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGIALLAGDALFPL 152
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEKKFGE 218
GF HIVSHTPP LVP +LRVIAEIAR VGSTGMAAGQ++DLEG P FVQEKKFG
Sbjct: 153 GFHHIVSHTPPELVPRATILRVIAEIARTVGSTGMAAGQYVDLEGGPFPPSFVQEKKFGA 212
Query: 219 MSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKS 278
M ECSAVCGG L GA +DE++SLRRYGRAVG+LYQ VDDI E K
Sbjct: 213 MGECSAVCGGLLGGATEDELESLRRYGRAVGMLYQAVDDITEEKNN-------------- 258
Query: 279 YVAFYGVEKAMEVAEELRAKAKEELDRF-KKY--GDNVLPLYSFIDYAADREF 328
G KAME+AEEL+ KAK+EL F KY GD ++PLY+F+DYAA R F
Sbjct: 259 -----GAGKAMEMAEELKEKAKKELQVFDNKYGGGDTLVPLYTFVDYAAHRHF 306
>gi|224080676|ref|XP_002306207.1| predicted protein [Populus trichocarpa]
gi|222849171|gb|EEE86718.1| predicted protein [Populus trichocarpa]
Length = 258
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/259 (72%), Positives = 211/259 (81%), Gaps = 21/259 (8%)
Query: 1 MIFSSALLANPP---CVCLPRKFP------------VRCSSLPVSAASQLRSTQFDLKTY 45
M+ SS + + P + LP K P ++CS +S +SQ ++ QFDLKTY
Sbjct: 1 MVVSSLIAISSPLTTTIYLPVKSPNLYTKILGKMSKIQCS---LSVSSQSKTAQFDLKTY 57
Query: 46 WTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAF 105
WTTLI EI+Q L++A+ ++YP++IYE+MRYSVLAKG KRAPPVMCVAACELFG NR+AAF
Sbjct: 58 WTTLIGEINQELDQAVPIQYPDKIYEAMRYSVLAKGAKRAPPVMCVAACELFGGNRLAAF 117
Query: 106 PTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVS 165
PTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHT+YGVD+AILAGDALFPLGF HIVS
Sbjct: 118 PTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTIYGVDMAILAGDALFPLGFSHIVS 177
Query: 166 HTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEMSECSAV 225
TP LVPEPR+LRVIAEIARAVGS GMAAGQFLDLEG PN VEFVQEKK+GEM ECSAV
Sbjct: 178 QTPSDLVPEPRLLRVIAEIARAVGSRGMAAGQFLDLEGGPNAVEFVQEKKYGEMGECSAV 237
Query: 226 CGGFLAGADDDEIQSLRRY 244
CGG LAGA DDEI RRY
Sbjct: 238 CGGLLAGATDDEI---RRY 253
>gi|224284786|gb|ACN40123.1| unknown [Picea sitchensis]
Length = 369
Score = 356 bits (914), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 178/319 (55%), Positives = 230/319 (72%), Gaps = 14/319 (4%)
Query: 21 PVRCSS---LPVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSV 77
P+RCSS + + + + FDL+ YW ++ E++ LEK++ ++YPE+I+ SMRYSV
Sbjct: 56 PLRCSSPSYVTDTPKGEGEAEGFDLRRYWNSVRKEMEAELEKSVPLRYPEKIHVSMRYSV 115
Query: 78 LAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQP 137
LA+ KR PP+MC+AACE G ++ A PTACALEMVH ASLIHDDLPCMDDDP RRGQP
Sbjct: 116 LAEKAKRGPPMMCIAACEAVGGSKQQALPTACALEMVHTASLIHDDLPCMDDDPIRRGQP 175
Query: 138 SNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQ 197
SNHTV+GVD+A+LAGDALFPLGF++IVS T VP R+++VIA+IA+ VGS GM GQ
Sbjct: 176 SNHTVFGVDMAVLAGDALFPLGFEYIVSSTSD--VPPDRIVKVIAQIAKTVGSQGMVVGQ 233
Query: 198 FLDLEG------EPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVL 251
++DL +P+LVEF+ E+KFG M+ECSAV GG + GA D+E++ LR YGR+VGVL
Sbjct: 234 YMDLGSTGNNKFDPSLVEFIHERKFGIMAECSAVTGGIIGGATDEEVERLRNYGRSVGVL 293
Query: 252 YQVVDDILEAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGD 311
YQ+ DDILE +A + +K K SY YG+EKA E+AE LR+ AK EL F +
Sbjct: 294 YQIADDILEEEALLEGNGVIRKNK-TSYPRAYGLEKAREIAETLRSNAKMELSGFDR--G 350
Query: 312 NVLPLYSFIDYAADREFSV 330
PLYSF+DYA DR F V
Sbjct: 351 KSAPLYSFVDYAIDRSFDV 369
>gi|50252136|dbj|BAD28132.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica
Group]
gi|215713481|dbj|BAG94618.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740753|dbj|BAG97409.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767016|dbj|BAG99244.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 342
Score = 340 bits (871), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 170/306 (55%), Positives = 216/306 (70%), Gaps = 17/306 (5%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLA----KGT-KRAPPVMCVAA 93
FDL+ YWT+LI +++ L+ A+ ++ PE+I+ +MRY+VL +GT KRAPPV+CVAA
Sbjct: 39 SFDLRLYWTSLIADVEAELDAAMPIRTPERIHSAMRYAVLPGAGNEGTAKRAPPVLCVAA 98
Query: 94 CELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGD 153
CEL G R AA P A ALEM+HAASL+HDDLPC D P+RRG+PS H YG D+A+LAGD
Sbjct: 99 CELLGAPREAALPAAVALEMLHAASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGD 158
Query: 154 ALFPLGFQHIVSHTP-PHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-- 210
ALFPL + H+++HTP P VP +LRV+ E+ARAVGSTGMAAGQFLDL G L E
Sbjct: 159 ALFPLAYTHVIAHTPSPDPVPHAVLLRVLGELARAVGSTGMAAGQFLDLAGATALGEAEV 218
Query: 211 --VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRD 268
V KKFGEM+ECSA CG L GA DE +LRRYGR +GVLYQ+VDDI A
Sbjct: 219 MKVLTKKFGEMAECSAACGAMLGGAGPDEEAALRRYGRTIGVLYQLVDDIRSASGN---- 274
Query: 269 EEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRF-KKYGDNVLPLYSFIDYAADRE 327
K + S + G+++A+ + EEL+A+AK E DRF KYG+ VLPLYSF+DYA +R
Sbjct: 275 --GKMRSNASVLRALGMDRALGIVEELKAQAKMEADRFGDKYGERVLPLYSFVDYAVERG 332
Query: 328 FSVVDS 333
F + D+
Sbjct: 333 FELQDA 338
>gi|125540612|gb|EAY87007.1| hypothetical protein OsI_08402 [Oryza sativa Indica Group]
Length = 344
Score = 340 bits (871), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 170/306 (55%), Positives = 216/306 (70%), Gaps = 17/306 (5%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLA----KGT-KRAPPVMCVAA 93
FDL+ YWT+LI +++ L+ A+ ++ PE+I+ +MRY+VL +GT KRAPPV+CVAA
Sbjct: 41 SFDLRLYWTSLIADVEAELDAAMPIRTPERIHSAMRYAVLPGAGNEGTAKRAPPVLCVAA 100
Query: 94 CELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGD 153
CEL G R AA P A ALEM+HAASL+HDDLPC D P+RRG+PS H YG D+A+LAGD
Sbjct: 101 CELLGAPREAALPAAVALEMLHAASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGD 160
Query: 154 ALFPLGFQHIVSHTP-PHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-- 210
ALFPL + H+++HTP P VP +LRV+ E+ARAVGSTGMAAGQFLDL G L E
Sbjct: 161 ALFPLAYTHVIAHTPSPDPVPHAVLLRVLGELARAVGSTGMAAGQFLDLAGATALGEAEV 220
Query: 211 --VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRD 268
V KKFGEM+ECSA CG L GA DE +LRRYGR +GVLYQ+VDDI A
Sbjct: 221 MKVLTKKFGEMAECSAACGAMLGGAGPDEEAALRRYGRTIGVLYQLVDDIRSASGN---- 276
Query: 269 EEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRF-KKYGDNVLPLYSFIDYAADRE 327
K + S + G+++A+ + EEL+A+AK E DRF KYG+ VLPLYSF+DYA +R
Sbjct: 277 --GKMRSNASVLRALGMDRALGIVEELKAQAKMEADRFGDKYGERVLPLYSFVDYAVERG 334
Query: 328 FSVVDS 333
F + D+
Sbjct: 335 FELQDA 340
>gi|297599729|ref|NP_001047684.2| Os02g0668100 [Oryza sativa Japonica Group]
gi|255671156|dbj|BAF09598.2| Os02g0668100, partial [Oryza sativa Japonica Group]
Length = 349
Score = 340 bits (871), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 170/306 (55%), Positives = 216/306 (70%), Gaps = 17/306 (5%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLA----KGT-KRAPPVMCVAA 93
FDL+ YWT+LI +++ L+ A+ ++ PE+I+ +MRY+VL +GT KRAPPV+CVAA
Sbjct: 46 SFDLRLYWTSLIADVEAELDAAMPIRTPERIHSAMRYAVLPGAGNEGTAKRAPPVLCVAA 105
Query: 94 CELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGD 153
CEL G R AA P A ALEM+HAASL+HDDLPC D P+RRG+PS H YG D+A+LAGD
Sbjct: 106 CELLGAPREAALPAAVALEMLHAASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGD 165
Query: 154 ALFPLGFQHIVSHTP-PHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-- 210
ALFPL + H+++HTP P VP +LRV+ E+ARAVGSTGMAAGQFLDL G L E
Sbjct: 166 ALFPLAYTHVIAHTPSPDPVPHAVLLRVLGELARAVGSTGMAAGQFLDLAGATALGEAEV 225
Query: 211 --VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRD 268
V KKFGEM+ECSA CG L GA DE +LRRYGR +GVLYQ+VDDI A
Sbjct: 226 MKVLTKKFGEMAECSAACGAMLGGAGPDEEAALRRYGRTIGVLYQLVDDIRSASGN---- 281
Query: 269 EEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRF-KKYGDNVLPLYSFIDYAADRE 327
K + S + G+++A+ + EEL+A+AK E DRF KYG+ VLPLYSF+DYA +R
Sbjct: 282 --GKMRSNASVLRALGMDRALGIVEELKAQAKMEADRFGDKYGERVLPLYSFVDYAVERG 339
Query: 328 FSVVDS 333
F + D+
Sbjct: 340 FELQDA 345
>gi|374639381|gb|AEZ55679.1| geranyl diphosphate synthase small subunit type II.1 [Salvia
miltiorrhiza]
Length = 290
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 170/305 (55%), Positives = 213/305 (69%), Gaps = 40/305 (13%)
Query: 22 VRCSSLPVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKG 81
VRCSS A+ + +TQ DL+ YWT+LI+++D+ L A+ +KYPE I+ESMRYS+LAK
Sbjct: 25 VRCSS-----AASVPTTQPDLRNYWTSLISDVDRKLNDAVPLKYPELIHESMRYSLLAKT 79
Query: 82 TKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHT 141
KRAPPVMC+AACELFG +R AA PT CALEMVHAAS +HDDLP +DD SRRGQ NHT
Sbjct: 80 AKRAPPVMCIAACELFGGDRAAAIPTVCALEMVHAASFVHDDLPYIDDALSRRGQLPNHT 139
Query: 142 VYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL 201
+YG D+AILAGDAL PL FQ+IV HTP LV + +LRV+ EIARAVGSTGMAA Q
Sbjct: 140 LYGPDMAILAGDALLPLAFQYIVLHTPTQLVSQLHLLRVVQEIARAVGSTGMAATQ---- 195
Query: 202 EGEPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEA 261
F+ E KFGE+ CSAVCG L GA D+EI+ L YGR VG+LY+VV+D+LE
Sbjct: 196 --------FIGENKFGELGRCSAVCGALLGGASDEEIERLGEYGRIVGILYRVVEDMLEG 247
Query: 262 KAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFID 321
K + + V E+L+++A++EL F+KYGD VLPL++FID
Sbjct: 248 K-----------------------KVNIGVVEDLKSRARKELYMFEKYGDKVLPLHTFID 284
Query: 322 YAADR 326
YAA+R
Sbjct: 285 YAAER 289
>gi|413923398|gb|AFW63330.1| hypothetical protein ZEAMMB73_683286 [Zea mays]
Length = 342
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 169/305 (55%), Positives = 213/305 (69%), Gaps = 17/305 (5%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKG-----TKRAPPVMCVAAC 94
FDL+ YWT+LI +++ L+ A+ ++ PE I+ +MRY+VL KRAPPV+CVAAC
Sbjct: 40 FDLRRYWTSLIADVESELDAAMPMQPPESIHSAMRYAVLPGAGKEGAAKRAPPVLCVAAC 99
Query: 95 ELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDA 154
EL G R AA P A ALEM+HAASL+HDDLPC D P+RRG+PS H YG D+A+LAGDA
Sbjct: 100 ELLGAPRAAALPAAAALEMLHAASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDA 159
Query: 155 LFPLGFQHIVSHTP-PHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF--- 210
LFPL + H++SHTP P VP ++RV+AE+ARAVGSTGMAAGQFLDL G L E
Sbjct: 160 LFPLAYTHVISHTPCPDPVPHAVLMRVLAELARAVGSTGMAAGQFLDLAGATALGEAEVM 219
Query: 211 -VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
V KKFGEM+ECSA CG L GA DE +LRRYGR +GVLY++VDDI A
Sbjct: 220 QVLTKKFGEMAECSAACGAMLGGARPDEEAALRRYGRTIGVLYELVDDIRSASGN----- 274
Query: 270 EKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFK-KYGDNVLPLYSFIDYAADREF 328
K + S + G+++A+ + EEL+A+AK E DRF KYGD VLPLYSF+DYA +R F
Sbjct: 275 -GKMRSNASVLRSLGMDRALGIVEELKAQAKTEADRFSDKYGDRVLPLYSFVDYAVERGF 333
Query: 329 SVVDS 333
+ D+
Sbjct: 334 ELQDA 338
>gi|326505838|dbj|BAJ91158.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326514464|dbj|BAJ96219.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 342
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 180/347 (51%), Positives = 231/347 (66%), Gaps = 23/347 (6%)
Query: 1 MIFSSALLANPPCVCLPRKFPVRCSS---LPVSAASQLRSTQFDLKTYWTTLITEIDQNL 57
M SS ++ P + LP K P S LP+ A++ + FDL+ YWT+LI+E++ L
Sbjct: 1 MALSSLFVSLP--IPLP-KLPSTSKSSRFLPIRASAAAAAPSFDLRRYWTSLISEVEGEL 57
Query: 58 EKAITVKYPEQIYESMRYSVLAKG-----TKRAPPVMCVAACELFGVNRIAAFPTACALE 112
+ A+ ++ PE I+ +MR++VL KRAPPV+CVAACEL G R AA PTA ALE
Sbjct: 58 DAAMPIRPPESIHNAMRHAVLPGAGKEGAAKRAPPVLCVAACELLGAPRAAALPTAAALE 117
Query: 113 MVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTP-PHL 171
M+H ASL+HDDLPC D P+RRG+PS H YG D+A+LAGDALFPL + H++S TP P
Sbjct: 118 MLHGASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTHVISRTPSPDP 177
Query: 172 VPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF----VQEKKFGEMSECSAVCG 227
V +LRV+AE+AR VGSTGMAAGQFLDL G L E V KKFGEM+ECSA CG
Sbjct: 178 VSHAVLLRVLAELARTVGSTGMAAGQFLDLAGASALGEAEVMQVLTKKFGEMAECSAACG 237
Query: 228 GFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVAFYGVEK 287
L GA DE +LRRYGRA+GVLY++VDD+ A K + S + G+++
Sbjct: 238 AMLGGAGPDEEAALRRYGRAIGVLYELVDDMRSASGN------GKMRSNASVLRALGMDR 291
Query: 288 AMEVAEELRAKAKEELDRF-KKYGDNVLPLYSFIDYAADREFSVVDS 333
A+ + EEL+A+AK E DRF KYGD VLPLYSF+DYA +R F + DS
Sbjct: 292 ALGIVEELKAQAKTEADRFGDKYGDRVLPLYSFVDYAVERSFELQDS 338
>gi|357136943|ref|XP_003570062.1| PREDICTED: geranylgeranyl pyrophosphate synthase-related protein,
chloroplastic-like [Brachypodium distachyon]
Length = 346
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 169/306 (55%), Positives = 213/306 (69%), Gaps = 17/306 (5%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVL-----AKGTKRAPPVMCVAA 93
FDL+ YWT+LI E++ L+ A+ ++ PE I+ +MR++VL KRAPPV+CVAA
Sbjct: 43 SFDLRRYWTSLIAEVEGELDAAMPIRPPESIHSAMRHAVLPGAGKEGAAKRAPPVLCVAA 102
Query: 94 CELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGD 153
CEL G R AA PTA ALEM+HAASL+HDDLPC D P+RRG+PS H YG D+A+LAGD
Sbjct: 103 CELLGAPRAAALPTAAALEMLHAASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGD 162
Query: 154 ALFPLGFQHIVSHTP-PHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-- 210
ALFPL + H++S TP P+ V +LRV+AE+AR VGSTGMAAGQFLDL G L E
Sbjct: 163 ALFPLAYTHVISRTPSPNPVSHAVLLRVLAELARTVGSTGMAAGQFLDLAGATALGEREV 222
Query: 211 --VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRD 268
V KKFGEM+ECSA CG LAGA DE SLRRYGR +GVLY++VDDI A
Sbjct: 223 MQVLTKKFGEMAECSAACGAMLAGAGPDEEASLRRYGRTIGVLYELVDDIRSASGN---- 278
Query: 269 EEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFK-KYGDNVLPLYSFIDYAADRE 327
K + S + G+++A+ + EEL+A+AK E DRF KYG+ VLPLYSF+DYA +R
Sbjct: 279 --GKMRSNASVLRSLGMDRALGIVEELKAQAKAEADRFADKYGERVLPLYSFVDYAVERG 336
Query: 328 FSVVDS 333
F + D+
Sbjct: 337 FELQDA 342
>gi|308080718|ref|NP_001183942.1| putative geranylgeranyl pyrophosphate synthase 4 [Zea mays]
gi|148535925|gb|ABQ85649.1| putative geranylgeranyl pyrophosphate synthase 4 [Zea mays]
gi|413938171|gb|AFW72722.1| putative geranylgeranyl pyrophosphate synthase 4 [Zea mays]
Length = 343
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 177/342 (51%), Positives = 225/342 (65%), Gaps = 19/342 (5%)
Query: 5 SALLANPPCVCLPRKFPVRCSSLPVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVK 64
S+L P +P P R + S+ + S FDL+ YWT+LI +++ L+ A+ ++
Sbjct: 4 SSLFITLPIPNVPSPKPRRMLTSRASSDAPAASASFDLRRYWTSLIADVESELDAAMPMQ 63
Query: 65 YPEQIYESMRYSVLAKG-----TKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASL 119
PE I+ +MRY+VL KRAPPV+CVAACEL G R AA P A ALEM+HAASL
Sbjct: 64 PPESIHYAMRYAVLPGAGKEGAAKRAPPVLCVAACELLGAPRAAALPAAAALEMLHAASL 123
Query: 120 I--HDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTP-PHLVPEPR 176
+ HDDLPC D P+RRG+PS H YG D+A+LAGDALFPL + H++SHTP P VP
Sbjct: 124 VLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTHVISHTPSPDPVPHAV 183
Query: 177 VLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF----VQEKKFGEMSECSAVCGGFLAG 232
+LRV+AE+ARAVGSTGMAAGQFLDL G L E V KKFGEM+ECSA CG L G
Sbjct: 184 LLRVLAELARAVGSTGMAAGQFLDLAGATALGEAEVMQVLTKKFGEMAECSAACGAMLGG 243
Query: 233 ADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVA 292
A DE LRRYGR +GVLY++VDDI A K + S + G+++A+ +
Sbjct: 244 AGPDEEAELRRYGRTIGVLYELVDDIRSASGN------GKMRSNASVLRSLGMDRALGIV 297
Query: 293 EELRAKAKEELDRF-KKYGDNVLPLYSFIDYAADREFSVVDS 333
EEL+A+AK DRF +KYGD VLPLYSF+DYA +R F + D+
Sbjct: 298 EELKAQAKTTADRFAEKYGDRVLPLYSFVDYAVERGFELQDA 339
>gi|125583193|gb|EAZ24124.1| hypothetical protein OsJ_07863 [Oryza sativa Japonica Group]
Length = 342
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 160/306 (52%), Positives = 207/306 (67%), Gaps = 17/306 (5%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLA----KGT-KRAPPVMCVAA 93
FDL+ YWT+LI +++ L+ A+ ++ PE+I+ +MRY+VL +GT KRAPPV+CVAA
Sbjct: 39 SFDLRLYWTSLIADVEAELDAAMPIRTPERIHSAMRYAVLPGAGNEGTAKRAPPVLCVAA 98
Query: 94 CELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGD 153
CEL G R A P A AL+MV A L+++DLP + P RRG PSN YG D+A+LAGD
Sbjct: 99 CELLGAPREAPVPAALALQMVQAGWLVNEDLPWFEAGPKRRGGPSNQAAYGTDMAVLAGD 158
Query: 154 ALFPLGFQHIVSHTP-PHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-- 210
ALFPL + H+++ P P VP +LRV+ E+ARAVGSTGMAAGQFLDL G L E
Sbjct: 159 ALFPLAYTHVIAQNPSPEPVPHAVLLRVLGELARAVGSTGMAAGQFLDLAGATALGEAEV 218
Query: 211 --VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRD 268
V KKFGEM+ECSA CG L GA DE +LRRYGR +GVLYQ+VDDI A
Sbjct: 219 MKVLTKKFGEMAECSAACGAMLGGAGPDEEAALRRYGRTIGVLYQLVDDIRSASGN---- 274
Query: 269 EEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFK-KYGDNVLPLYSFIDYAADRE 327
K + S + G+++A+ + EEL+A+AK E DRF KYG+ VLPLYSF+DYA +R
Sbjct: 275 --GKMRSNASVLRALGMDRALGIVEELKAQAKMEADRFGDKYGERVLPLYSFVDYAVERG 332
Query: 328 FSVVDS 333
F + D+
Sbjct: 333 FELQDA 338
>gi|4322331|gb|AAD16018.1| geranylgeranyl diphosphate synthase [Taxus canadensis]
gi|44972242|gb|AAS49033.1| geranylgeranyl diphosphate synthase [Taxus x media]
gi|45505274|gb|AAS67008.1| geranylgeranyl diphosphate synthase [Taxus x media]
gi|86277807|gb|ABC88389.1| geranylgeranyl diphosphate synthase [Taxus wallichiana]
Length = 393
Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 144/305 (47%), Positives = 189/305 (61%), Gaps = 20/305 (6%)
Query: 36 RSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
+ +FD Y + +D L+KAI ++YPE+I+ESMRYS+LA G KR P +C+AACE
Sbjct: 95 KDIEFDFNEYMKSKAVAVDAALDKAIPLEYPEKIHESMRYSLLAGG-KRVRPALCIAACE 153
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
L G ++ A PTACA+EM+H SLIHDDLPCMD+D RRG+P+NH V+G D A+LAGDAL
Sbjct: 154 LVGGSQDLAMPTACAMEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVFGEDTAVLAGDAL 213
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VE 209
F+HI T VP R LRVI+E+ + +GS G+ GQ +D+ EG+ N+ +E
Sbjct: 214 LSFAFEHIAVATSK-TVPSDRTLRVISELGKTIGSQGLVGGQVVDITSEGDANVDLKTLE 272
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
++ K + ECS V GG L GA +DEI +RRY R VG+L+QVVDDIL+ T E
Sbjct: 273 WIHIHKTAVLLECSVVSGGILGGATEDEIARIRRYARCVGLLFQVVDDILDV---TKSSE 329
Query: 270 EKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
E K GK +Y G+EKA E A EL +AKEEL F + PL DY
Sbjct: 330 ELGKTAGKDLLTDKATYPKLMGLEKAKEFAAELATRAKEELSSFDQI--KAAPLLGLADY 387
Query: 323 AADRE 327
A R+
Sbjct: 388 IAFRQ 392
>gi|380039815|gb|AFD32422.1| geranylgeranyl diphosphate synthase [Taxus x media]
Length = 393
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 142/305 (46%), Positives = 188/305 (61%), Gaps = 20/305 (6%)
Query: 36 RSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
+ +FD + + +D L+KAI ++YPE+I+E MRYS+LA G KR P +C+AACE
Sbjct: 95 KDIEFDFNEHMKSKAVAVDAALDKAIPLEYPEKIHEPMRYSLLAGG-KRVRPALCIAACE 153
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
L G ++ A PTACA+EM+H SLIHDDLPCMD+D RRG+P+NH V+G D A+LAGDAL
Sbjct: 154 LVGGSQDLAMPTACAMEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVFGEDTAVLAGDAL 213
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VE 209
F+HI T VP R LRVI+E+ + +GS G+ GQ +D+ EG+ N+ +E
Sbjct: 214 LSFAFEHIAVATSK-TVPSDRTLRVISELGKTIGSQGLVGGQVVDIASEGDANVDLKTLE 272
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
++ K + ECS V GG L GA +DEI +RRY R VG+L+QVVDDIL+ T E
Sbjct: 273 WIHIHKTAVLLECSVVSGGILGGATEDEIARIRRYARCVGLLFQVVDDILDV---TKSSE 329
Query: 270 EKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
E K GK +Y G+EKA E A EL +AKEEL F + PL DY
Sbjct: 330 ELGKTAGKDLLTDKATYPKLMGLEKAKEFAAELATRAKEELSSFDQI--KAAPLLGLADY 387
Query: 323 AADRE 327
A R+
Sbjct: 388 IAFRQ 392
>gi|224069436|ref|XP_002302977.1| predicted protein [Populus trichocarpa]
gi|222844703|gb|EEE82250.1| predicted protein [Populus trichocarpa]
Length = 314
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 139/308 (45%), Positives = 194/308 (62%), Gaps = 20/308 (6%)
Query: 32 ASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCV 91
A ++ S F K Y T + ++++ LE+A+ +++P +I+E+MRYS+L G KR P++C+
Sbjct: 14 AQEVPSLAFQFKEYMLTKLKQVNEALEEAVPLQHPIKIHEAMRYSLLGNG-KRMCPILCI 72
Query: 92 AACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILA 151
A+CEL G + A P ACALEMVHA SLIHDDLPCMD+D RRG+P+NH V+G IAILA
Sbjct: 73 ASCELVGGDEELAMPLACALEMVHAMSLIHDDLPCMDNDDLRRGKPTNHKVFGECIAILA 132
Query: 152 GDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV--- 208
GDAL L F+HI S T V V+R IAE+ A+GS G+ AGQ +D++ E V
Sbjct: 133 GDALLSLAFEHIASKTKN--VSPDCVVRAIAELGSAIGSRGVVAGQIVDIDSEGKEVSMK 190
Query: 209 --EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP 266
E++ K ++ E SAVCG + GADD I+ LR+Y R++G+LYQVVDDIL+A T
Sbjct: 191 TLEYIHVHKTAKLLEASAVCGAIMGGADDASIERLRKYARSIGLLYQVVDDILDA---TK 247
Query: 267 RDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSF 319
EE K GK +Y G+++A + A EL +AK+E+ F +PL+
Sbjct: 248 SSEELGKTAGKDLASNKATYPKLMGIDEAKKFAAELVEQAKKEIASFDSA--KAVPLFHL 305
Query: 320 IDYAADRE 327
DY A R+
Sbjct: 306 ADYIARRQ 313
>gi|269996470|gb|ACZ57571.1| isoprenyl diphosphate synthase [Picea abies]
Length = 383
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/324 (43%), Positives = 197/324 (60%), Gaps = 25/324 (7%)
Query: 22 VRCSSLPVSAAS-----QLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYS 76
+RCS+ A+ + + T+FD K Y + +++ L++A+ ++YPE+I+E+MRYS
Sbjct: 66 LRCSNTNAQLANLSEQVKGKVTEFDFKEYMRSKAMSVNEALDRAVPLRYPEKIHEAMRYS 125
Query: 77 VLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQ 136
+LA G KR P++C+AACEL G + A PTACA+E++H SLIHDDLP MD+D RRG+
Sbjct: 126 LLAGG-KRVRPILCIAACELVGGSEELAMPTACAMEIIHTMSLIHDDLPPMDNDDLRRGK 184
Query: 137 PSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAG 196
P+NH V+G A+LAGDAL F+HI T V RVLRV++E+ RA+GS G+A G
Sbjct: 185 PTNHKVFGEGTAVLAGDALLSFAFEHIAVSTSK-TVESDRVLRVVSELGRAIGSEGVAGG 243
Query: 197 QFLDL--EGEPNL----VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGV 250
Q D+ +G P++ +E++ K + ECS G + GA DDEI+ +R+Y R VG+
Sbjct: 244 QVADITSQGNPSVGLETLEWIHIHKTAVLLECSVASGAIIGGASDDEIERVRKYARCVGL 303
Query: 251 LYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEEL 303
L+QVVDDIL+ T EE K K +Y G+EKA E A+EL KAKEEL
Sbjct: 304 LFQVVDDILDV---TKSSEELGKTAAKDLLSDKATYPKLMGLEKAKEFADELLGKAKEEL 360
Query: 304 DRFKKYGDNVLPLYSFIDYAADRE 327
F PL DY A R+
Sbjct: 361 SFFNP--TKAAPLLGLADYIAQRQ 382
>gi|224286499|gb|ACN40956.1| unknown [Picea sitchensis]
Length = 383
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/324 (43%), Positives = 197/324 (60%), Gaps = 25/324 (7%)
Query: 22 VRCSSLPVSAAS-----QLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYS 76
+RCS+ A+ + + T+FD K Y + +++ L++A+ ++YPE+I+E+MRYS
Sbjct: 66 LRCSNTNAQLANLSEQVKEKVTEFDFKEYMRSKAMSVNEALDRAVPLRYPEKIHEAMRYS 125
Query: 77 VLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQ 136
+LA G KR P++C+AACEL G + A PTACA+E++H SLIHDDLP MD+D RRG+
Sbjct: 126 LLA-GGKRVRPILCIAACELVGGSEELAMPTACAMEIIHTMSLIHDDLPPMDNDDLRRGK 184
Query: 137 PSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAG 196
P+NH V+G A+LAGDAL F+HI T V RVLRV++E+ RA+GS G+A G
Sbjct: 185 PTNHKVFGEGTAVLAGDALLSFAFEHIAVSTSK-TVESDRVLRVVSELGRAIGSEGVAGG 243
Query: 197 QFLDL--EGEPNL----VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGV 250
Q D+ +G P++ +E++ K + ECS G + GA DDEI+ +R+Y R VG+
Sbjct: 244 QVADITSQGNPSVGLETLEWIHIHKTAVLLECSVASGAIIGGASDDEIERVRKYARCVGL 303
Query: 251 LYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEEL 303
L+QVVDDIL+ T EE K K +Y G+EKA E A+EL KAKEEL
Sbjct: 304 LFQVVDDILDV---TKSSEELGKTAAKDLLSDKATYPKLMGLEKAKEFADELLGKAKEEL 360
Query: 304 DRFKKYGDNVLPLYSFIDYAADRE 327
F PL DY A R+
Sbjct: 361 SFFNP--TKAAPLLGLADYIAQRQ 382
>gi|168203181|gb|ACA21461.1| geranylgeranyl diphosphate synthase 5 [Picea abies]
gi|224285639|gb|ACN40538.1| unknown [Picea sitchensis]
Length = 382
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 139/323 (43%), Positives = 194/323 (60%), Gaps = 26/323 (8%)
Query: 23 RCSSLPVSAASQLRS-----TQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSV 77
RCSS ++ + LR +FD K Y + +++ L++A+ ++YPE+I+E+MRYS+
Sbjct: 67 RCSS-TIAQLANLREEVKEVIKFDFKEYLLSKAMAVNEALDRAVQLRYPEKIHEAMRYSL 125
Query: 78 LAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQP 137
LA G KR PV+C+AACEL G A PTACA+EM+H SLIHDDLPCMD+D RRG+P
Sbjct: 126 LAGG-KRVRPVLCIAACELVGGTEKLAMPTACAMEMIHTMSLIHDDLPCMDNDDFRRGKP 184
Query: 138 SNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQ 197
+NH V+G A+LAGDAL F+HI T V R+LRV++E+ R +GS G+ GQ
Sbjct: 185 TNHKVFGEGTAVLAGDALLSFAFEHIAVSTSKS-VGSDRILRVVSELGRTIGSQGLVGGQ 243
Query: 198 FLDLEGEPN------LVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVL 251
D+ E N +E++ K + ECS VCG ++GA ++EI+ ++RY R+VG+L
Sbjct: 244 VADITSEGNASVDLDTLEWIHIHKTAVLLECSVVCGAIISGASENEIERVKRYARSVGLL 303
Query: 252 YQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELD 304
+QVVDDIL+ T +E K GK +Y G+EKA + A EL +AKE L
Sbjct: 304 FQVVDDILDV---TKSSKELGKTAGKDLISDKATYPKLMGLEKAKQFAVELLDRAKENLS 360
Query: 305 RFKKYGDNVLPLYSFIDYAADRE 327
F PL DY A R+
Sbjct: 361 CFDPM--KAAPLLGLADYIAFRQ 381
>gi|34484306|gb|AAQ72786.1| geranylgeranyl diphosphate synthase [Ginkgo biloba]
gi|157072687|gb|ABV08866.1| geranylgeranyl diphosphate synthase [Ginkgo biloba]
gi|157072689|gb|ABV08867.1| geranylgeranyl diphosphate synthase [Ginkgo biloba]
Length = 391
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 138/302 (45%), Positives = 183/302 (60%), Gaps = 20/302 (6%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
+FD K Y + +++ L+KA+ YPE+I+ESMRYS+LA G KR P +C+AACEL G
Sbjct: 96 EFDFKKYMYSKAISVNEALDKAVPTHYPEKIHESMRYSLLAGG-KRVRPTLCIAACELVG 154
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
A P ACA+EM+H +LIHDDLPCMD+D RRG+P+NH +G D A+LAGDAL
Sbjct: 155 GTEDLAMPAACAMEMIHTMTLIHDDLPCMDNDNLRRGKPTNHKAFGEDTAVLAGDALLSF 214
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQ 212
F+HI T V RVLRVI E+ +++GS G+ AGQ +D+ EG+ ++ +E++
Sbjct: 215 AFEHIARSTSK-TVESERVLRVICELGKSMGSEGLVAGQIVDIASEGDTSVDLKTLEYIH 273
Query: 213 EKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKK 272
K + ECS V G + GA ++EI+ RRY R VG+L+QVVDDIL+ T EE
Sbjct: 274 LHKTAVLLECSVVSGAIIGGASEEEIERTRRYARCVGLLFQVVDDILDV---TKTSEELG 330
Query: 273 KKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAAD 325
K GK +Y G+EKA E A EL KAKEEL F PL DY A
Sbjct: 331 KTAGKDLISDKATYPKLMGLEKAKEFAVELVNKAKEELSYFDPV--KAAPLLGLADYIAF 388
Query: 326 RE 327
R+
Sbjct: 389 RQ 390
>gi|307950755|gb|ACA21458.2| geranyl diphosphate synthase 2 [Picea abies]
Length = 386
Score = 253 bits (647), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 135/302 (44%), Positives = 188/302 (62%), Gaps = 20/302 (6%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
+FD Y + +++ L+K I +YP++IYESMRYS+LA G KR P++C+AACEL G
Sbjct: 91 EFDFDKYMHSKAIAVNEALDKVIPPRYPQKIYESMRYSLLAGG-KRVRPILCIAACELMG 149
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
A PTACA+EM+H SLIHDDLP +D+D RRG+P+NH V+G D AI+AGDAL L
Sbjct: 150 GTEELAMPTACAIEMIHTMSLIHDDLPYIDNDDLRRGKPTNHKVFGEDTAIIAGDALLSL 209
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQ 212
F+H+ T L + +LR+++EI RA GS G+ GQ +D+ EG+P++ +E+V
Sbjct: 210 AFEHVAVSTSRTLGTDI-ILRLLSEIGRATGSEGVMGGQVVDIESEGDPSIDLETLEWVH 268
Query: 213 EKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKK 272
K + ECS VCG + GA +D+I+ RRY R VG+L+QVVDDIL+ + EE
Sbjct: 269 IHKTAVLLECSVVCGAIMGGASEDDIERARRYARCVGLLFQVVDDILDVSQSS---EELG 325
Query: 273 KKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAAD 325
K GK +Y G+EKA E A+EL + K+EL F PL++ DY A
Sbjct: 326 KTAGKDLISDKATYPKLMGLEKAKEFADELLNRGKQELSCFDP--TKAAPLFALADYIAS 383
Query: 326 RE 327
R+
Sbjct: 384 RQ 385
>gi|17352451|gb|AAL17614.2|AF425235_1 geranylgeranyl diphosphate synthase [Abies grandis]
Length = 383
Score = 253 bits (646), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 132/302 (43%), Positives = 189/302 (62%), Gaps = 20/302 (6%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
+FD K Y + +++ L++A+ ++YPE+I+E+MRYS+LA G KR PV+C++ACEL G
Sbjct: 88 EFDFKEYLRSKAMAVNEALDRAVPLRYPERIHEAMRYSLLAGG-KRVRPVLCISACELVG 146
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
A PTACA+EM+H SLIHDDLPCMD+D RRG+P+NH V+G AILAGDAL
Sbjct: 147 GTEEVAMPTACAMEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVFGEGTAILAGDALLSF 206
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQ 212
F+HI T V R+LRV++E+ R +GS G+ GQ D+ EG+ ++ +E++
Sbjct: 207 AFEHIAVSTSKS-VGTDRILRVVSELGRTIGSQGLVGGQVADITSEGDASVDLDTLEWIH 265
Query: 213 EKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKK 272
K + ECS +CG ++GA D+EI+ ++RY R+VG+L+QVVDDIL+ T +E
Sbjct: 266 IHKTAVLLECSVMCGAIISGASDNEIERIQRYARSVGLLFQVVDDILDV---TKSSKELG 322
Query: 273 KKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAAD 325
K GK +Y G+EKA + A +L +AKE+L F PL DY A
Sbjct: 323 KTAGKDLISDKATYPKLMGLEKAKQFASDLLIRAKEDLSCFDPM--KAAPLLGLADYIAF 380
Query: 326 RE 327
R+
Sbjct: 381 RQ 382
>gi|167999215|ref|XP_001752313.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696708|gb|EDQ83046.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 288
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 138/288 (47%), Positives = 179/288 (62%), Gaps = 21/288 (7%)
Query: 53 IDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALE 112
++ L+KA+ ++YPE+I E+MRYS+LA G KR P +C+AACEL G N + P ACA+E
Sbjct: 8 VNVALDKAVPMQYPEKIREAMRYSLLA-GGKRVRPALCIAACELVGGNEEMSMPAACAME 66
Query: 113 MVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLV 172
MVH SLIHDDLPCMD+D RRG+P+NH V+G D A+LAGDAL F+HI T V
Sbjct: 67 MVHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDTAVLAGDALLTYAFEHIARDTTG--V 124
Query: 173 PEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQEKKFGEMSECSAVC 226
P RVLRVIA + +AVGS G+ AGQ +D+ EG+P + +E+V K + E S VC
Sbjct: 125 PADRVLRVIAHLGKAVGSEGLVAGQIVDIASEGDPTVGLETLEYVHTHKTAVLLESSVVC 184
Query: 227 GGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SY 279
G L GA +DEI L +Y R VG+L+QVVDDIL+ T E K GK +Y
Sbjct: 185 GAILGGASEDEISRLSKYARNVGLLFQVVDDILDV---TKSSAELGKTAGKDLLADKATY 241
Query: 280 VAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
G+EK+ AEEL KAK++L F + PL DY A R+
Sbjct: 242 PKLLGLEKSKAFAEELTRKAKDQLSVFDQ--QKAAPLLGLADYIAYRQ 287
>gi|75250205|sp|Q94ID7.1|GGPPS_HEVBR RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
Short=GGPP synthase; Short=GGPS; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|14325238|dbj|BAB60678.1| geranylgeranyl diphosphate synthase [Hevea brasiliensis]
Length = 370
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 139/343 (40%), Positives = 197/343 (57%), Gaps = 35/343 (10%)
Query: 12 PCVCLPRKFPVRCSSLPVSAASQLRSTQ--------------FDLKTYWTTLITEIDQNL 57
P L F R S P+S+ S + + + FD K+Y I+Q L
Sbjct: 35 PLKSLAISFAYRKSERPISSVSAIITKEEETLQEEQNNPPPSFDFKSYMLQKGNSINQAL 94
Query: 58 EKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAA 117
E AI ++ P +I+ESMRYS+LA G KR P +C+AACEL G N A P ACA+EM+H
Sbjct: 95 EAAIPLQEPAKIHESMRYSLLA-GGKRVRPALCLAACELVGGNDSMAMPAACAVEMIHTM 153
Query: 118 SLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRV 177
SLIHDDLPCMD+D RRG+P+NH V+G D+A+LAGDAL F+HI T V R+
Sbjct: 154 SLIHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAGDALLAFAFEHIAVSTLN--VSSARI 211
Query: 178 LRVIAEIARAVGSTGMAAGQFLDLEGEPNL------VEFVQEKKFGEMSECSAVCGGFLA 231
+R + E+A+A+G+ G+ AGQ +D+ E + +EF+ K ++ E + V G L
Sbjct: 212 VRAVGELAKAIGAEGLVAGQVVDINSEGSSEVDLEKLEFIHIHKTAKLLEGAVVLGAILG 271
Query: 232 GADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVA-------FYG 284
G D+E++ LR+Y R +G+L+QVVDDIL+ T +E K GK VA G
Sbjct: 272 GGTDEEVEKLRKYARDIGLLFQVVDDILDV---TKSSQELGKTAGKDLVADKVTYPKLLG 328
Query: 285 VEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+EK+ E AE+L +A+E+L F + PL + +Y A R+
Sbjct: 329 IEKSREFAEKLNKEAQEQLAGFDP--EKAAPLIALANYIAHRQ 369
>gi|46241274|gb|AAS82860.1| geranyl diphosphate synthase large subunit [Antirrhinum majus]
Length = 372
Score = 251 bits (640), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 186/301 (61%), Gaps = 21/301 (6%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
D KTY + +++ LE+A+ +K P +I+ESMRYS+LA G KR P++C+AACEL G
Sbjct: 79 LDFKTYMLEKASSVNKALEQAVLLKEPLKIHESMRYSLLA-GGKRVRPMLCIAACELVGG 137
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A P+ACA+EM+H SLIHDDLPCMD+D RRG+P+NH +YG D+A+LAGDAL
Sbjct: 138 LESTAMPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDALLAFS 197
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP------NLVEFVQE 213
F+H+ T V R++RVI E+A+ +GS G+ AGQ +D+ E +EF+
Sbjct: 198 FEHVAKSTKG--VSSDRIVRVIGELAKCIGSEGLVAGQVVDISSEGMTEVGLEHLEFIHV 255
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K + E S V G + GADD++++ LR++ R +G+L+QVVDDIL+ T +E K
Sbjct: 256 HKTAALLEASVVLGAIVGGADDEDVEKLRKFARCIGLLFQVVDDILDV---TKSSQELGK 312
Query: 274 KKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK VA G+EK+ E AE+L +A+E+L+ F PL + +Y A R
Sbjct: 313 TAGKDLVADKTTYPKLLGIEKSREFAEKLNREAQEQLEGFDSV--KAAPLIALANYIAYR 370
Query: 327 E 327
+
Sbjct: 371 D 371
>gi|15234534|ref|NP_195399.1| geranylgeranyl pyrophosphate synthase 11 [Arabidopsis thaliana]
gi|13432144|sp|P34802.2|GGPP1_ARATH RecName: Full=Heterodimeric geranylgeranyl pyrophosphate synthase
large subunit 1, chloroplastic; Short=GGPP synthase 1;
Short=GGPS1; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase 1; AltName: Full=Dimethylallyltranstransferase
1; AltName: Full=Farnesyl diphosphate synthase 1;
AltName: Full=Farnesyltranstransferase 1; AltName:
Full=Geranyltranstransferase 1; Flags: Precursor
gi|2464899|emb|CAB16803.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|7270630|emb|CAB80347.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|110742524|dbj|BAE99179.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|332661305|gb|AEE86705.1| geranylgeranyl pyrophosphate synthase 11 [Arabidopsis thaliana]
Length = 371
Score = 249 bits (637), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 130/309 (42%), Positives = 188/309 (60%), Gaps = 21/309 (6%)
Query: 34 QLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAA 93
Q + FD +Y T +++ L+ A+ ++ P +I+E+MRYS+LA G KR PV+C+AA
Sbjct: 68 QSEPSSFDFMSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGG-KRVRPVLCIAA 126
Query: 94 CELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGD 153
CEL G A P ACA+EM+H SLIHDDLPCMD+D RRG+P+NH V+G D+A+LAGD
Sbjct: 127 CELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGD 186
Query: 154 ALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP-------- 205
AL F+H+ S T +V RV+R + E+A+A+G+ G+ AGQ +D+ E
Sbjct: 187 ALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGL 246
Query: 206 NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT 265
+EF+ K + E SAV G + G DDEI+ LR++ R +G+L+QVVDDIL+ T
Sbjct: 247 EHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDV---T 303
Query: 266 PRDEEKKKKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYS 318
+E K GK +A G+EK+ E AE+L +A+++L F D V PL +
Sbjct: 304 KSSKELGKTAGKDLIADKLTYPKIMGLEKSREFAEKLNREARDQLLGFDS--DKVAPLLA 361
Query: 319 FIDYAADRE 327
+Y A R+
Sbjct: 362 LANYIAYRQ 370
>gi|356498416|ref|XP_003518048.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Glycine max]
Length = 350
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 185/301 (61%), Gaps = 21/301 (6%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
FD K Y + + +++ L+ +++++ P++I+E+MRYS+LA G KR PV+CVAACEL G
Sbjct: 57 FDFKNYMLSKASAVNKALDDSVSLREPKKIHEAMRYSLLA-GGKRVRPVLCVAACELVGG 115
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+ A P ACALEM+H SLIHDDLPCMD+D RRG+P+NHTV+G D+A+LAGDAL
Sbjct: 116 HEATAMPAACALEMIHTMSLIHDDLPCMDNDDLRRGKPTNHTVFGEDVAVLAGDALLAFA 175
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP------NLVEFVQE 213
F+HI + T PR+LR I E+AR++GS G+ AGQ +D+ E +EF+
Sbjct: 176 FEHIAASTRG--ASAPRILRAIGELARSIGSEGLVAGQVVDINSEGLADVGLERLEFIHV 233
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K + E + V G L G DDE++ LR++ R +G+L+QVVDDIL+ T +E K
Sbjct: 234 HKTAALLEGAVVLGAILGGGTDDEVEKLRKFARYIGLLFQVVDDILDV---TKSSQELGK 290
Query: 274 KKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK VA G+EK+ E A +L A+++L F PL + +Y A R
Sbjct: 291 TAGKDLVADKVTYPKLLGIEKSKEFAAKLNKDAQDQLAGFDPV--KAAPLIALANYIAYR 348
Query: 327 E 327
+
Sbjct: 349 Q 349
>gi|164605012|dbj|BAF98302.1| geranylgeranyl-diphosphate synthase [Hevea brasiliensis]
Length = 370
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 138/343 (40%), Positives = 196/343 (57%), Gaps = 35/343 (10%)
Query: 12 PCVCLPRKFPVRCSSLPVSAASQLRSTQ--------------FDLKTYWTTLITEIDQNL 57
P L F R S P+S+ S + + + FD K+Y I+Q L
Sbjct: 35 PLKSLAISFAYRKSERPISSVSAIITKEEETLQEEQNNPPPSFDFKSYMLQKANSINQAL 94
Query: 58 EKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAA 117
E AI ++ P +I+ESMRYS+LA G KR P +C+AACEL G N A P ACA+ M+H
Sbjct: 95 EAAIPLQEPAKIHESMRYSLLA-GGKRVRPALCLAACELVGGNDSMAMPAACAVGMIHTM 153
Query: 118 SLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRV 177
SLIHDDLPCMD+D RRG+P+NH V+G D+A+LAGDAL F+HI T V R+
Sbjct: 154 SLIHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAGDALLAFAFEHIAVSTLN--VSSARI 211
Query: 178 LRVIAEIARAVGSTGMAAGQFLDLEGEPNL------VEFVQEKKFGEMSECSAVCGGFLA 231
+R + E+A+A+G+ G+ AGQ +D+ E + +EF+ K ++ E + V G L
Sbjct: 212 VRAVGELAKAIGAEGLVAGQVVDINSEGSSEVDLEKLEFIHIHKTAKLLEGAVVLGAILG 271
Query: 232 GADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVA-------FYG 284
G D+E++ LR+Y R +G+L+QVVDDIL+ T +E K GK VA G
Sbjct: 272 GGTDEEVEKLRKYARGIGLLFQVVDDILDV---TKSSQELGKTAGKDLVADKVTYPKLLG 328
Query: 285 VEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+EK+ E AE+L +A+E+L F + PL + +Y A R+
Sbjct: 329 IEKSREFAEKLNKEAQEQLAGFDP--EKAAPLIALANYIAYRQ 369
>gi|22535961|gb|AAN01135.1| geranyl diphosphate synthase [Abies grandis]
Length = 387
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 140/330 (42%), Positives = 190/330 (57%), Gaps = 24/330 (7%)
Query: 15 CLPRKFPVRCSSLPVSAAS----QLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIY 70
C+ R R S+ V A+ + +FD Y + + + L+KAI YP++I+
Sbjct: 64 CIQRASSSRSSNTIVQFANLPEQGKKVVEFDFNKYMLSKAMAVTEALDKAIPHSYPQKIH 123
Query: 71 ESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDD 130
ESMRYS+LA G KR PV+C+AACEL G A PTACA+EM+H SLIHDDLPCMD+D
Sbjct: 124 ESMRYSLLA-GGKRVRPVLCIAACELVGGREELAMPTACAMEMIHTMSLIHDDLPCMDND 182
Query: 131 PSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGS 190
RRG+P+NH V+G D A+LAGDAL F+HIV+ T V +LR + E+ARA G
Sbjct: 183 DLRRGKPTNHKVFGQDTALLAGDALHAFAFEHIVAFTSKS-VGSDGILRAVTELARATGP 241
Query: 191 TGMAAGQFLDLEGEPN------LVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRY 244
G+ GQ +D+ E + +E++ K + EC+ VCG + GA DEI+ +RR+
Sbjct: 242 QGIMGGQIVDIASERDAFVDLQTLEWIHIHKTAVLFECATVCGAIIGGASGDEIERIRRF 301
Query: 245 GRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRA 297
R +G+L+QVVDDIL+ T E+ K GK +Y G+EKA + EL
Sbjct: 302 ARYLGLLFQVVDDILDV---TKSSEDLGKTAGKDLVSDKATYPKLMGLEKAKGFSLELLN 358
Query: 298 KAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
KAKEEL F PL+ DY A R+
Sbjct: 359 KAKEELSCFDPM--KAAPLFGLADYMALRQ 386
>gi|86609315|ref|YP_478077.1| geranylgeranyl diphosphate synthase [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86557857|gb|ABD02814.1| geranylgeranyl diphosphate synthase [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 297
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 136/300 (45%), Positives = 182/300 (60%), Gaps = 21/300 (7%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
F+LK Y + ++++ L A+ YPE+IYE+MRYS+LA G KR P++C+AACEL G
Sbjct: 6 FNLKAYLSQRQQQVEEALSAALVPAYPERIYEAMRYSLLAGG-KRLRPILCLAACELAGG 64
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A PTACALEM+H SLIHDDLP MD+D RRG+P+NH V+G DIAILAGDAL
Sbjct: 65 TVEQALPTACALEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKVFGEDIAILAGDALLAFA 124
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEK 214
F+HI S T VP VL+VIA I AV +TG+ GQ +DLE E + E++
Sbjct: 125 FEHIASQTQG--VPPQLVLQVIARIGHAVAATGLVGGQVVDLESEGKAISLETLEYIHSH 182
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKK 274
K G + E S V GG LAG D++ + L RY R +G+ +Q+VDDIL+ A + E+ K
Sbjct: 183 KTGALLEVSVVSGGILAGGDEELLAHLSRYARDIGLAFQIVDDILDITATS---EQLGKT 239
Query: 275 KGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
GK +Y + G+E + + AEEL AKE L + YG PL + D+ R+
Sbjct: 240 AGKDQAAAKATYPSLLGLEASRQKAEELIQSAKETL---RPYGPRAEPLLALADFITRRQ 296
>gi|86605096|ref|YP_473859.1| geranylgeranyl diphosphate synthase [Synechococcus sp. JA-3-3Ab]
gi|86553638|gb|ABC98596.1| geranylgeranyl diphosphate synthase [Synechococcus sp. JA-3-3Ab]
Length = 297
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 136/300 (45%), Positives = 183/300 (61%), Gaps = 21/300 (7%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
F+L TY + ++++ L A+ YPE+IYE+MRYS+LA G KR P++C+AACEL G
Sbjct: 6 FNLDTYLSQRQQQVEEALSAALVPAYPERIYEAMRYSLLAGG-KRLRPILCLAACELAGG 64
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+ A PTACALEM+H SLIHDDLP MD+D RRG+P+NH V+G DIAILAGDAL
Sbjct: 65 SVEQAMPTACALEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKVFGEDIAILAGDALLAYA 124
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEK 214
F+HI S T VP VL+VIA I AV +TG+ GQ +DLE E + E++
Sbjct: 125 FEHIASQTRG--VPPQLVLQVIARIGHAVAATGLVGGQVVDLESEGKAISLETLEYIHSH 182
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKK 274
K G + E S V GG LAGAD++ + L Y R +G+ +Q+VDDIL+ A + E+ K
Sbjct: 183 KTGALLEASVVSGGILAGADEELLARLSHYARDIGLAFQIVDDILDVTATS---EQLGKT 239
Query: 275 KGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
GK +Y + G+E + + AEEL AKE L + YG PL + D+ R+
Sbjct: 240 AGKDQAAAKATYPSLLGLEASRQKAEELIQSAKEAL---RPYGSQAEPLLALADFITRRQ 296
>gi|56122556|gb|AAV74396.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
palaestina]
Length = 310
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/305 (42%), Positives = 189/305 (61%), Gaps = 21/305 (6%)
Query: 36 RSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
++ FD K Y ++Q L+ A+ ++ PE+I+E+MRYS+LA G KR P++C+AACE
Sbjct: 13 KTMDFDFKAYLLEKGKSVNQALDNAVLIREPEKIHEAMRYSLLA-GGKRVRPILCIAACE 71
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
L G N A P+ACA+EM+H SL+HDDLPCMD+D RRG+P+NH VYG ++A+LAGDAL
Sbjct: 72 LVGGNESMAMPSACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVYGENVAVLAGDAL 131
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VE 209
F+++ + T V RV+R I E+A+ +GS G+ AGQ +D+ G N+ +E
Sbjct: 132 LAFAFEYVANATVG--VSPSRVIRAIGELAKDIGSEGLVAGQVVDILSAGMSNIGLDHLE 189
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
F+ K + E S V G L G D++++ LR++ R +G+L+QVVDDIL+ T E
Sbjct: 190 FIHLHKTAALLEASVVIGAILGGGTDEQVERLRKFARCIGLLFQVVDDILDV---TMSSE 246
Query: 270 EKKKKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
E K GK VA G+EKA E AE+L+ +A E+LD F + PL + ++
Sbjct: 247 ELGKTAGKDLVADKATYPKLLGLEKAREFAEKLKNEATEQLDEFDP--EKAAPLLALAEF 304
Query: 323 AADRE 327
A R+
Sbjct: 305 IAHRQ 309
>gi|148279681|gb|ABQ53935.1| geranylgeranyl pyrophosphate synthase [Nicotiana attenuata]
Length = 366
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/302 (44%), Positives = 185/302 (61%), Gaps = 21/302 (6%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
QF+ KTY +++ L++A+ VK P IYE+MRYS+LA G KR P++C+AACEL G
Sbjct: 72 QFNFKTYVAEKAISVNKALDEAVIVKDPPVIYEAMRYSLLAGG-KRVRPMLCLAACELVG 130
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
++ A P ACA+EM+H SLIHDDLPCMD+D RRG+P+NH VYG D+A+LAGD+L
Sbjct: 131 GDQSNAMPAACAVEMIHTMSLIHDDLPCMDNDDIRRGKPTNHKVYGEDVAVLAGDSLLAF 190
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQ 212
F+ I + T V R+L I E+A+++G+ G+ AGQ D+ G PN+ +EF+
Sbjct: 191 AFEFIATATAG--VSPSRILAAIGELAKSIGTEGLVAGQVADIACTGNPNVGLDTLEFIH 248
Query: 213 EKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKK 272
K + E S V G L G D+E++ LRR+ R +G+L+QVVDDIL+ T EE
Sbjct: 249 IHKTAALLEASVVLGAILGGGTDEEVEKLRRFARCIGLLFQVVDDILDV---TKSSEELG 305
Query: 273 KKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAAD 325
K GK +Y G+EKA E A EL AK++L F + PL + DY A+
Sbjct: 306 KTAGKDLVVDKTTYPKLLGLEKAKEFAAELNRDAKQQLADFDPH--KAAPLVALADYIAN 363
Query: 326 RE 327
R+
Sbjct: 364 RQ 365
>gi|22535959|gb|AAN01134.1| geranyl diphosphate synthase [Abies grandis]
Length = 381
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/305 (43%), Positives = 186/305 (60%), Gaps = 20/305 (6%)
Query: 36 RSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
++ +FD Y + +++ L KAI ++YP++IYESMRYS+LA G KR PV+C+AACE
Sbjct: 83 KAVEFDFNKYMDSKAMTVNEALNKAIPLRYPQKIYESMRYSLLAGG-KRVRPVLCIAACE 141
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
L G A PTACA+EM+H SL+HDDLPC+D+D RRG+P+NH ++G D A+ AG+AL
Sbjct: 142 LVGGTEELAIPTACAIEMIHTMSLMHDDLPCIDNDDLRRGKPTNHKIFGEDTAVTAGNAL 201
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VE 209
F+HI T V R+LR+++E+ RA GS G+ GQ +D+ EG+P++ +E
Sbjct: 202 HSYAFEHIAVSTSK-TVGADRILRMVSELGRATGSEGVMGGQMVDIASEGDPSIDLQTLE 260
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
++ K + ECS VCG + GA + I+ RRY R VG+L+QVVDDIL+ T +
Sbjct: 261 WIHIHKTAMLLECSVVCGAIIGGASEIVIERARRYARCVGLLFQVVDDILDV---TKSSD 317
Query: 270 EKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
E K GK +Y G+EKA E ++EL +AK EL F PL DY
Sbjct: 318 ELGKTAGKDLISDKATYPKLMGLEKAKEFSDELLNRAKGELSCFDPV--KAAPLLGLADY 375
Query: 323 AADRE 327
A R+
Sbjct: 376 VAFRQ 380
>gi|22535957|gb|AAN01133.1| geranyl diphosphate synthase [Abies grandis]
Length = 383
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 193/312 (61%), Gaps = 20/312 (6%)
Query: 29 VSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPV 88
+S ++ ++T+FD K Y + +++ LE+A+ ++YPE+I+E+MRYS+LA G KR P+
Sbjct: 78 LSEQAKEKATEFDFKEYLHSKAISVNEALERAVPLRYPEKIHEAMRYSLLAGG-KRIRPI 136
Query: 89 MCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIA 148
+ +AACEL G + A PTACA+EM+H SLIHDDLP MD+D RRG+ +NH V+G A
Sbjct: 137 LTIAACELVGGSEELAMPTACAMEMIHTMSLIHDDLPSMDNDDLRRGKLTNHKVFGEGTA 196
Query: 149 ILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPN 206
+LAGDAL F+HI T V RVLRV++E+ +A+GS G+A GQ D+ EG+P+
Sbjct: 197 VLAGDALLSFAFEHIAVSTRK-TVASHRVLRVVSELGKAIGSQGVAGGQVADITSEGDPS 255
Query: 207 L----VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAK 262
+ +E++ K + EC+ V G + GA ++EI+ RY R VG+L+QVVDDIL+
Sbjct: 256 VGLETLEWIHIHKTAVLLECAVVSGAIIGGASENEIERTGRYARCVGLLFQVVDDILDV- 314
Query: 263 AQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLP 315
T EE K GK +Y G+EKA E A+EL +AKEEL F P
Sbjct: 315 --TRSSEELGKTAGKDLVSDKATYPKLMGLEKAKEFADELLDRAKEELSCFNPA--KAAP 370
Query: 316 LYSFIDYAADRE 327
L DY A R+
Sbjct: 371 LLGLADYIALRQ 382
>gi|87299435|dbj|BAE79550.1| geranylgeranyl pyrophosphate synthase [Chrysanthemum x morifolium]
Length = 345
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 132/310 (42%), Positives = 192/310 (61%), Gaps = 21/310 (6%)
Query: 30 SAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVM 89
S +QL S +FD K+Y ++Q L+ A+ ++ P++I+ESMRYS+LA G KR P++
Sbjct: 44 SKHTQLES-EFDFKSYMVQKANTVNQALDDAVPIREPKKIHESMRYSLLA-GGKRVRPIL 101
Query: 90 CVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAI 149
C+A+CEL G ++I+A P ACA+EM+H SL+HDDLPCMD+D RRG+P+NH VYG +IA+
Sbjct: 102 CLASCELVGGDQISAMPAACAVEMIHTMSLMHDDLPCMDNDDFRRGKPTNHIVYGEEIAV 161
Query: 150 LAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV- 208
LAGDAL F+H+ + T V R++R I E+A+ +GS G+ AGQ +D+ E V
Sbjct: 162 LAGDALLSFAFEHVATATKD--VSAERIVRAIGELAKCIGSEGLVAGQVVDICSEGADVG 219
Query: 209 ----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQ 264
EF+ K + E S V G + G D E++ LR++ R++G+L+QVVDDIL+
Sbjct: 220 LEHLEFIHLHKTAALLEGSVVLGAIMGGGSDVEVERLRKFVRSIGLLFQVVDDILDV--- 276
Query: 265 TPRDEEKKKKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLY 317
T EE K GK VA G+EK+ E AE+L +A+E+L F PL
Sbjct: 277 TKSSEELGKTAGKDLVADKTTYPKLLGIEKSREFAEKLNKEAQEQLKEFDIR--KAAPLI 334
Query: 318 SFIDYAADRE 327
+ +Y A R+
Sbjct: 335 ALANYIAYRD 344
>gi|428311367|ref|YP_007122344.1| geranylgeranyl pyrophosphate synthase [Microcoleus sp. PCC 7113]
gi|428252979|gb|AFZ18938.1| geranylgeranyl pyrophosphate synthase [Microcoleus sp. PCC 7113]
Length = 309
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 131/303 (43%), Positives = 182/303 (60%), Gaps = 22/303 (7%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
S FDL TY +++ L++++ + YPE+IYE+MRYS+LA G KR P++C+A CEL
Sbjct: 14 SLTFDLSTYLKQRQAQVEAALDRSLPLTYPEKIYEAMRYSLLAGG-KRLRPILCLATCEL 72
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
G A PTACALEM+H SLIHDDLP MD+D RRG+ +NH VYG DIAILAGD L
Sbjct: 73 VGGTLEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDIAILAGDGLL 132
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN------LVEF 210
F+++ + T VP +VL+V+A + RAVG+ G+ GQ +DLE E N + F
Sbjct: 133 AYAFEYVATQTQN--VPAHQVLQVVARLGRAVGAAGLVGGQVVDLESEGNSDIQEETLTF 190
Query: 211 VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEE 270
+ K G + E VCGG L G D+EI+ L RY + +G+ +Q+VDDIL+ T EE
Sbjct: 191 IHTHKTGALLEACVVCGGILGGVTDEEIERLSRYAKNIGLAFQIVDDILDI---TATQEE 247
Query: 271 KKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYA 323
K GK +Y + +G+E + A++L AK EL+ F G+ PL + D+
Sbjct: 248 LGKTAGKDLLAQKATYPSLWGIEASKTKAQQLIDAAKAELELF---GEKAQPLLAIADFI 304
Query: 324 ADR 326
R
Sbjct: 305 TTR 307
>gi|79154586|gb|ABB52065.1| putative geranylgeranyl pyrophosphate synthase [Daucus carota
subsp. sativus]
Length = 365
Score = 247 bits (631), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 192/301 (63%), Gaps = 21/301 (6%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
FD K+Y +++ L+ +++++ P +I+ESMRYS+LA G KR P++ +AACELFG
Sbjct: 72 FDFKSYMLEKAISVNKALDASVSLQEPVKIHESMRYSLLA-GGKRVRPILSIAACELFGG 130
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+ A P+ACA+EM+H SL+HDDLP MD+D RRG+P+NH VYG +A+LAGDA+ L
Sbjct: 131 HEAVAMPSACAVEMIHTMSLMHDDLPFMDNDDLRRGKPTNHKVYGESVAVLAGDAMLALA 190
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQE 213
F + + T V +V+RVI E+A+A+G+ G+ AGQ +D+ EG+PNL +EF+
Sbjct: 191 FHLVATETSG--VSSSQVVRVIVELAKAIGAEGLVAGQIVDVCSEGDPNLGLKDLEFIHR 248
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K + E S V G L GA+D+E++ +R+Y R +G+L+QVVDDIL+ T +E K
Sbjct: 249 SKTAALLEGSVVMGAILGGANDEEVEKVRKYARCIGLLFQVVDDILDV---TKSSKELGK 305
Query: 274 KKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK VA G+EK+ E ++EL+ +A ++L F D PL + +Y A+R
Sbjct: 306 TAGKDLVADKTTYPKLIGIEKSREFSDELKREAVDQLAGFN--SDKAAPLIAMANYIANR 363
Query: 327 E 327
+
Sbjct: 364 D 364
>gi|356538045|ref|XP_003537515.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Glycine max]
Length = 355
Score = 247 bits (630), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 132/309 (42%), Positives = 188/309 (60%), Gaps = 23/309 (7%)
Query: 34 QLRST--QFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCV 91
QL+ T FD K Y ++Q L+ AI ++ P +I+++MRYS+LA G KR PV+C+
Sbjct: 54 QLQDTPLNFDFKGYMIAKAHTVNQALDAAIALRDPHKIHQAMRYSLLAGG-KRVRPVLCI 112
Query: 92 AACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILA 151
AACEL G A P ACA+EM+H SLIHDDLPCMD+D RRG+P+NH VYG D+A+LA
Sbjct: 113 AACELVGGTEATAIPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLA 172
Query: 152 GDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL-- 207
GDAL F+H+ + T V RV+R I E+A+++G+ G+ AGQ +D+ EG N+
Sbjct: 173 GDALLAFAFEHVAASTEG--VSPSRVVRAIGELAKSIGTEGLVAGQVVDIDSEGVANVGL 230
Query: 208 --VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT 265
+EF+ K + E + V G + G D+E++ LR++ R +G+L+QVVDDIL+ T
Sbjct: 231 ETLEFIHVHKTAALLEAAVVLGAIVGGGSDEEVEKLRKFARCIGLLFQVVDDILDV---T 287
Query: 266 PRDEEKKKKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYS 318
EE K GK VA G++K+ E A+EL AKE+L F PL++
Sbjct: 288 KSSEELGKTAGKDLVADKVTYPKLLGIDKSKEFAQELLKDAKEQLSGFDP--PKAAPLFA 345
Query: 319 FIDYAADRE 327
+Y A R+
Sbjct: 346 LTNYIAYRQ 354
>gi|13431547|sp|Q43133.1|GGPPS_SINAL RecName: Full=Geranylgeranyl pyrophosphate synthase,
chloroplastic/chromoplastic; Short=GGPP synthase;
Short=GGPS; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase; AltName: Full=Dimethylallyltranstransferase;
AltName: Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|1419758|emb|CAA67330.1| geranylgeranyl pyrophosphate synthase [Sinapis alba]
Length = 366
Score = 247 bits (630), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 128/303 (42%), Positives = 188/303 (62%), Gaps = 22/303 (7%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
FD +Y +++ L+ A+ ++ P +I+E+MRYS+LA G KR PV+C+AACEL G
Sbjct: 70 FDFMSYIIRKADSVNKALDSAVPLREPLKIHEAMRYSLLAGG-KRVRPVLCIAACELVGG 128
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A P CA+EM+H SLIHDDLPCMD+D RRG+P+NH VYG D+A+LAGDAL
Sbjct: 129 EESLAMPARCAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFA 188
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE----PNL----VEFV 211
F+H+ S T + P RV+R + E+A+A+G+ G+ AGQ +D+ E N+ ++F+
Sbjct: 189 FEHLASATSSEVSP-ARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNVGLEHLKFI 247
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
K + E SAV GG + G D+EI+ LR++ R +G+L+QVVDDIL+ T +E
Sbjct: 248 HLHKTAALLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDV---TKSSQEL 304
Query: 272 KKKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAA 324
K GK +A G+EK+ E AE+L +A+++L F D V PL + +Y A
Sbjct: 305 GKTAGKDLIADKLTYPKLMGLEKSREFAEKLNTEARDQLLGFDS--DKVAPLLALANYIA 362
Query: 325 DRE 327
+R+
Sbjct: 363 NRQ 365
>gi|4958918|dbj|BAA78046.1| GGPP synthase [Daucus carota]
Length = 366
Score = 247 bits (630), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 128/303 (42%), Positives = 194/303 (64%), Gaps = 20/303 (6%)
Query: 38 TQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
+ FD K+Y +++ L+ +++++ P +I+ESMRYS+LA G KR P++ +AACELF
Sbjct: 70 STFDFKSYMLEKAISVNKALDASVSLQEPVKIHESMRYSLLAGG-KRVRPLLSIAACELF 128
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G + A P+ACA+EM+H SL+HDDLP MD+D RRG+P+NH VYG +A+LAGDA+
Sbjct: 129 GGHEAVAMPSACAVEMIHTMSLMHDDLPFMDNDDLRRGKPTNHKVYGESVAVLAGDAMLA 188
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFV 211
L H+V+ T V +V+RVI E+A+A+G+ G+ AGQ +D+ EG+PNL +EF+
Sbjct: 189 LAAFHLVA-TETRGVSSDQVVRVIVELAKAIGAEGLVAGQIVDVCSEGDPNLGLEDLEFI 247
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
K + E S V G L GA+D+E++ +R+Y R +G+L+QVVDDIL+ T +E
Sbjct: 248 HRSKTAALLEGSVVMGAILGGANDEEVEKVRKYARCIGLLFQVVDDILDV---TKSSKEL 304
Query: 272 KKKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAA 324
K GK VA G+EK+ E ++EL+ +A ++L F D PL + +Y A
Sbjct: 305 GKTAGKDLVADKTTYPKLIGIEKSREFSDELKREAIDQLAGFNS--DKTAPLIAMANYIA 362
Query: 325 DRE 327
+R+
Sbjct: 363 NRD 365
>gi|159490409|ref|XP_001703169.1| geranylgeranyl diphosphate synthase [Chlamydomonas reinhardtii]
gi|158270709|gb|EDO96545.1| geranylgeranyl diphosphate synthase [Chlamydomonas reinhardtii]
Length = 345
Score = 246 bits (629), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 132/315 (41%), Positives = 189/315 (60%), Gaps = 13/315 (4%)
Query: 18 RKFPVRCSSLPVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSV 77
RK + ++ ++ FD TY +++ +++A+ +KYPE + ESMRYS+
Sbjct: 31 RKVVAQVATATAEKVDVKQAGSFDFNTYMVDRAKLVNKAMDEAVPLKYPETLNESMRYSL 90
Query: 78 LAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQP 137
LA G KR P +C+AACEL G + AA P ACA+EMVH SLIHDDLP MD+D RRG+P
Sbjct: 91 LA-GGKRVRPALCLAACELVGGDIHAALPAACAMEMVHTMSLIHDDLPSMDNDDFRRGRP 149
Query: 138 SNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQ 197
+NH VYG DIAILAGDAL F+HI T VP RVLRVI E+ +AVG G+ AGQ
Sbjct: 150 TNHKVYGEDIAILAGDALLSFSFEHIARATKG--VPAERVLRVIMELGKAVGQDGLVAGQ 207
Query: 198 FLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLY 252
+D++ E ++++++ E K + E S VCG L GAD+ I+ LR+Y +G+ +
Sbjct: 208 VVDIQSEDKEVGLDVLKYIHEHKTAALLEASVVCGAILGGADESTIEKLRKYSLNIGLAF 267
Query: 253 QVVDDILEAKAQTPRDEEKKKK----KGKSYVAFYGVEKAMEVAEELRAKAKEELDRFK- 307
QV+DDIL+ A T + + K +Y G+EK+ +VA++L +A ++LD F
Sbjct: 268 QVIDDILDVTATTEQLGKTAAKDLAVNKTTYPKLLGLEKSKQVADDLIKEAIQQLDGFDA 327
Query: 308 KYGDNVLPLYSFIDY 322
++ L FI Y
Sbjct: 328 AKAAPLVALAKFIGY 342
>gi|354569185|ref|ZP_08988342.1| Farnesyltranstransferase [Fischerella sp. JSC-11]
gi|353538935|gb|EHC08440.1| Farnesyltranstransferase [Fischerella sp. JSC-11]
Length = 308
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 131/293 (44%), Positives = 183/293 (62%), Gaps = 17/293 (5%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
FDL TY + LE+AI+V+YPE+IYE+MRYS+LA G KR P++C+A CE+ G
Sbjct: 16 FDLITYLKERQKLCEVALEQAISVRYPEKIYEAMRYSLLAGG-KRLRPIICLATCEMTGG 74
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
N A PTACALEM+H SLIHDDLP MD+D RRG+ +NH VYG DIAILAGD L
Sbjct: 75 NIAIAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLAYA 134
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE------PNLVEFVQE 213
F+++ +T VP R+LRV+A + RAVG+ G+ GQ LDLE E ++F+
Sbjct: 135 FEYVAVNTED--VPAERLLRVVAHLGRAVGAAGLVGGQVLDLESEGKSDICSETLDFIHH 192
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL------EAKAQTPR 267
K G + E S VCGG LAG +D ++ L Y + +G+ +Q++DDIL E +T
Sbjct: 193 HKTGALLEASVVCGGILAGTSEDNLKRLSCYAKNIGLAFQIIDDILDITSTQEQLGKTVG 252
Query: 268 DEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
++K KK +Y + +G+EK+ + A++L A EL+ F K + ++ L FI
Sbjct: 253 KDQKAKK--VTYPSLWGIEKSQKQAQQLIESACAELEPFGKAAEPLVALAHFI 303
>gi|443477457|ref|ZP_21067303.1| Farnesyltranstransferase [Pseudanabaena biceps PCC 7429]
gi|443017422|gb|ELS31868.1| Farnesyltranstransferase [Pseudanabaena biceps PCC 7429]
Length = 307
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/304 (43%), Positives = 183/304 (60%), Gaps = 22/304 (7%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
+ F+L Y L E++ L+ +I+V YPE+IYESMRYS++A G KR P++C+AA EL
Sbjct: 12 TVAFNLDKYLRDLKQEVEAALDASISVTYPEKIYESMRYSLMAGG-KRLRPILCLAAHEL 70
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
G + AA PTACA+EMVH SLIHDDLP MD+D RRG+P+NH VYG DIAILAGDAL
Sbjct: 71 LGGDLAAAMPTACAMEMVHTMSLIHDDLPAMDNDDFRRGKPTNHKVYGDDIAILAGDALL 130
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE------PNLVEF 210
F+ I T VP R+L+ IA + AV +TG+ GQ +DLE E ++ F
Sbjct: 131 AYAFEFIAVQTKG--VPAERILKAIAHLGHAVAATGLVGGQVVDLECEGKSDVTAEILTF 188
Query: 211 VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEE 270
+ K + E +CG LAGA+D +I+ L Y +G+ +Q++DDIL+ A + E+
Sbjct: 189 IHIHKTAALLESCVICGALLAGANDTDIKRLSTYANNIGLAFQIIDDILDITATS---EQ 245
Query: 271 KKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYA 323
K GK +Y + +G+E + A+EL +AK +L YGD LPL + DY
Sbjct: 246 LGKTAGKDLAAQKVTYPSLWGIEASQLKAQELVEQAKAQL---VSYGDAALPLMALADYI 302
Query: 324 ADRE 327
R+
Sbjct: 303 TARK 306
>gi|413730|gb|AAA32797.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 371
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 128/309 (41%), Positives = 186/309 (60%), Gaps = 21/309 (6%)
Query: 34 QLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAA 93
Q + FD +Y T +++ L+ A+ ++ P +I+E+M YS+LA G KR PV+C+AA
Sbjct: 68 QSEPSSFDFMSYIITKAELVNKALDSAVPLREPLKIHEAMSYSLLAGG-KRVRPVLCIAA 126
Query: 94 CELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGD 153
CEL G A P CA+EM+H SLIHDDLPCMD+D RRG+P+NH V+G D+A+LAGD
Sbjct: 127 CELVGGEESTAMPARCAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGD 186
Query: 154 ALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP-------- 205
AL F+H+ S T +V RV+R + E+A+A+G+ G+ AGQ +D+ E
Sbjct: 187 ALLSFSFEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGL 246
Query: 206 NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT 265
+EF+ K + E SAV G + G DDEI+ LR++ R +G+L+QVVDDIL+ T
Sbjct: 247 EHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDV---T 303
Query: 266 PRDEEKKKKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYS 318
+E K GK +A G+EK+ E AE+L +A+++L F D V PL +
Sbjct: 304 KSSKELGKTAGKDLIADKLTYPKIMGLEKSREFAEKLNREARDQLLGFDS--DKVAPLLA 361
Query: 319 FIDYAADRE 327
+Y A R+
Sbjct: 362 LANYIAYRQ 370
>gi|56122554|gb|AAV74395.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
palaestina]
Length = 364
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/305 (42%), Positives = 187/305 (61%), Gaps = 21/305 (6%)
Query: 36 RSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
+ FD K Y ++Q L+ AI ++ PE+I+E+MRYS+LA G KR P++C+AA E
Sbjct: 67 KEMTFDFKAYLLEKGKSVNQALDNAILIREPEKIHEAMRYSLLAGG-KRVRPILCIAASE 125
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
L G N A P+ACA+EM+H SLIHDDLPCMD+D RRG+P+NH VYG ++A+LAGDAL
Sbjct: 126 LVGGNESMAMPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGENVAVLAGDAL 185
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VE 209
F+++ + T V RV+R I E+A+ +GS G+ AGQ +D+ G N+ +E
Sbjct: 186 LAFAFEYVANATVG--VSPSRVVRAIGELAKDIGSEGLVAGQVVDILSAGMSNIGLDHLE 243
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
F+ K + E S V G L G D++++ LR++ R +G+L+QVVDDIL+ T E
Sbjct: 244 FIHLHKTAALLEASVVIGAILGGGTDEQVERLRKFARCIGLLFQVVDDILDV---TMSSE 300
Query: 270 EKKKKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
E K GK VA G+EKA E AE+L+ +A E+LD F + PL + +Y
Sbjct: 301 ELGKTAGKDLVADKATYPKLLGLEKAREFAEKLKNEAIEQLDEFDP--EEAAPLLALAEY 358
Query: 323 AADRE 327
A R+
Sbjct: 359 IAHRQ 363
>gi|409993924|ref|ZP_11277049.1| farnesyl-diphosphate synthase [Arthrospira platensis str. Paraca]
gi|291568862|dbj|BAI91134.1| geranylgeranyl pyrophosphate synthase [Arthrospira platensis
NIES-39]
gi|409935211|gb|EKN76750.1| farnesyl-diphosphate synthase [Arthrospira platensis str. Paraca]
Length = 316
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 134/298 (44%), Positives = 182/298 (61%), Gaps = 19/298 (6%)
Query: 38 TQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
T FDL TY + ++ L+ AITV YPE+IYESMRYS++A G KR P +C+A CEL
Sbjct: 22 TPFDLSTYLSQKKELVEAALDAAITVTYPEKIYESMRYSLMAGG-KRLRPTLCLATCELL 80
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G A PTACALEM+H SLIHDDLP MD+D RRG+ +NH VYG DIAILAGD L
Sbjct: 81 GGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDIAILAGDGLLS 140
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNLVE----FV 211
F+ + + T VP RVL+VI + RAVG+TG+ GQ +D+ EG ++ E F+
Sbjct: 141 YAFEFVATQTQG--VPPERVLQVIGRLGRAVGATGLVGGQVVDIASEGLSDVSEETLTFI 198
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
K G + E VCG LAGA++ +++ L RY + +G+ +Q+VDDIL+ A + E+
Sbjct: 199 HTHKTGALLEACVVCGAILAGANETDLERLSRYAKNIGLAFQIVDDILDITAPS---EQL 255
Query: 272 KKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
K GK +Y + +G+EK+ AE+L +AK EL F G + + FI Y
Sbjct: 256 GKTAGKDLEAQKATYPSLWGLEKSRAKAEQLVEEAKAELAAFGYGGKALAAIADFITY 313
>gi|21593158|gb|AAM65107.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 371
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 129/309 (41%), Positives = 186/309 (60%), Gaps = 21/309 (6%)
Query: 34 QLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAA 93
Q + FD +Y T +++ L+ A+ ++ P +I+E+MRYS+LA G KR PV+C+AA
Sbjct: 68 QSEPSSFDFMSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGG-KRVRPVLCIAA 126
Query: 94 CELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGD 153
CEL G A P ACA+EM+H SLIHDDLPCMD+D RRG+P+NH V+G D+A+LAGD
Sbjct: 127 CELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGD 186
Query: 154 ALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP-------- 205
AL F+H+ S T +V RV+R + E+A+A+G+ G+ AGQ +D+ E
Sbjct: 187 ALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGL 246
Query: 206 NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT 265
+EF+ K + E SAV + G DDEI+ LR++ R +G+L+QVVDDIL T
Sbjct: 247 EHLEFIHLHKTAALLEASAVLRAIVGGGSDDEIERLRKFARCIGLLFQVVDDILYV---T 303
Query: 266 PRDEEKKKKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYS 318
+E K GK +A G+EK+ E AE+L +A+++L F D V PL +
Sbjct: 304 KSSKELGKTAGKDLIADKLTYPKIMGLEKSREFAEKLNREARDQLLGFD--SDKVAPLLA 361
Query: 319 FIDYAADRE 327
+Y A R+
Sbjct: 362 LANYIAYRQ 370
>gi|9971808|gb|AAG10424.1| GGDP synthase [Tagetes erecta]
Length = 361
Score = 244 bits (623), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 131/301 (43%), Positives = 182/301 (60%), Gaps = 20/301 (6%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
+FD K+Y ++Q L+ A+ +K P +I+ESMRYS+LA G KR PV+C+AACEL G
Sbjct: 68 EFDFKSYMLEKANLVNQALDLAVPLKDPIKIHESMRYSLLA-GGKRVRPVLCIAACELVG 126
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
+ + A P ACA+EM+H SL+HDDLPCMD+D RRG+P+NH VYG +IA+L GDA+
Sbjct: 127 GDGLTAMPAACAVEMIHTMSLMHDDLPCMDNDDFRRGKPTNHMVYGEEIAVLGGDAMLSF 186
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQE 213
F+H+ + T V R+LR I E+A+ +GS G+ AGQ +D+ E V EF+
Sbjct: 187 AFEHMATATKG--VSSDRILRAIGELAKCIGSEGLVAGQVVDICSEGADVGLEHLEFIHL 244
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K + E S V G L G D EI+ LR++ R++G+L+QVVDDIL+ T EE K
Sbjct: 245 HKTAALLEGSVVLGAILGGGSDGEIEKLRKFARSIGLLFQVVDDILDV---TKSSEELGK 301
Query: 274 KKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK +Y G+EK+ E AEEL A+E+L F PL + +Y A R
Sbjct: 302 TAGKDLVSDKTTYPKLLGIEKSREFAEELNKDAQEQLSEFDPR--KAAPLIALANYIAYR 359
Query: 327 E 327
+
Sbjct: 360 Q 360
>gi|336359762|gb|AEI53622.1| chloroplast geranylgeranyl diphosphate synthase [Catharanthus
roseus]
Length = 383
Score = 244 bits (623), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 137/341 (40%), Positives = 197/341 (57%), Gaps = 39/341 (11%)
Query: 18 RKFPVRCSSLPVSAASQLRSTQF------------------DLKTYWTTLITEIDQNLEK 59
RK CS L +SA TQ D K Y +++ LE
Sbjct: 50 RKPIFSCSRLSISAIITKEQTQEESESKSKKEVAFSSSSSFDFKAYMIGKANSVNKALED 109
Query: 60 AITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASL 119
A+ V+ P +I+ESMRYS+LA G KR P++C+AACELFG A P+ACA+EM+H SL
Sbjct: 110 AVLVREPLKIHESMRYSLLAGG-KRVRPMLCIAACELFGGTESVAMPSACAVEMIHTMSL 168
Query: 120 IHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLR 179
+HDDLPCMD+D RRG+P+NH V+G D+A+LAGDAL F+HI + T V R++R
Sbjct: 169 MHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIATATKG--VSSERIVR 226
Query: 180 VIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQEKKFGEMSECSAVCGGFLAGA 233
V+ E+A+ +GS G+ AGQ +D+ EG ++ +EF+ K + E S V G + GA
Sbjct: 227 VVGELAKCIGSEGLVAGQVVDVCSEGIADVGLEHLEFIHIHKTAALLEGSVVLGAIVGGA 286
Query: 234 DDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVA-------FYGVE 286
+D++I LR++ R +G+L+QVVDDIL+ T +E K GK VA G++
Sbjct: 287 NDEQISKLRKFARCIGLLFQVVDDILDV---TKSSQELGKTAGKDLVADKVTYPKLLGID 343
Query: 287 KAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
K+ E AE+L +A+E+L F + PL + +Y A R+
Sbjct: 344 KSREFAEKLNREAQEQLAEFDP--EKAAPLIALANYIAYRD 382
>gi|13431546|sp|Q42698.1|GGPPS_CATRO RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
Short=GGPP synthase; Short=GGPS; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|1063276|emb|CAA63486.1| geranylgeranyl pyrophosphate synthase [Catharanthus roseus]
Length = 357
Score = 244 bits (623), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 137/341 (40%), Positives = 197/341 (57%), Gaps = 39/341 (11%)
Query: 18 RKFPVRCSSLPVSAASQLRSTQF------------------DLKTYWTTLITEIDQNLEK 59
RK CS L +SA TQ D K Y +++ LE
Sbjct: 24 RKPIFSCSRLSISAIITKEQTQEESESKSKKEVAFSSSSSFDFKAYMIGKANSVNKALED 83
Query: 60 AITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASL 119
A+ V+ P +I+ESMRYS+LA G KR P++C+AACELFG A P+ACA+EM+H SL
Sbjct: 84 AVLVREPLKIHESMRYSLLA-GGKRVRPMLCIAACELFGGTESVAMPSACAVEMIHTMSL 142
Query: 120 IHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLR 179
+HDDLPCMD+D RRG+P+NH V+G D+A+LAGDAL F+HI + T V R++R
Sbjct: 143 MHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIATATKG--VSSERIVR 200
Query: 180 VIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQEKKFGEMSECSAVCGGFLAGA 233
V+ E+A+ +GS G+ AGQ +D+ EG ++ +EF+ K + E S V G + GA
Sbjct: 201 VVGELAKCIGSEGLVAGQVVDVCSEGIADVGLEHLEFIHIHKTAALLEGSVVLGAIVGGA 260
Query: 234 DDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVA-------FYGVE 286
+D++I LR++ R +G+L+QVVDDIL+ T +E K GK VA G++
Sbjct: 261 NDEQISKLRKFARCIGLLFQVVDDILDV---TKSSQELGKTAGKDLVADKVTYPKLLGID 317
Query: 287 KAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
K+ E AE+L +A+E+L F + PL + +Y A R+
Sbjct: 318 KSREFAEKLNREAQEQLAEFDP--EKAAPLIALANYIAYRD 356
>gi|20386366|gb|AAM21638.1|AF492022_1 geranylgeranyl pyrophosphate synthase [Cistus creticus]
Length = 364
Score = 244 bits (622), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 131/301 (43%), Positives = 185/301 (61%), Gaps = 21/301 (6%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
FDLK+Y ++Q LE A++++ P +I+E+MRYSVLA G KR PV+C+AACEL G
Sbjct: 71 FDLKSYMIQKANSVNQALETAVSLREPLKIHEAMRYSVLAGG-KRVRPVLCIAACELVGG 129
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A P ACA+EM+H SLIHDD PCMD+D RRG+P+NH V+G DIA+LAGDAL
Sbjct: 130 EESMAMPAACAVEMIHTMSLIHDDPPCMDNDDLRRGKPTNHKVFGEDIAVLAGDALLAFS 189
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQE 213
F+H+ T V R++R + E+A+++GS G+ AGQ +D+ EG ++ +EF+
Sbjct: 190 FEHMTGSTVG--VSPARIVRAVGELAKSIGSEGLVAGQVVDICSEGLTDVGLEHLEFIHV 247
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K + E S V G L G D+E++ LR++ R +G+L+QVVDDIL+ T E K
Sbjct: 248 HKTAALLEGSVVLGAILGGGSDEEVEKLRKFARCIGLLFQVVDDILDV---TKSSTELGK 304
Query: 274 KKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK VA G+EK+ E AEEL+ A E+L F + + PL + +Y A R
Sbjct: 305 TAGKDLVADKVTYPKLMGIEKSREFAEELKNDAVEQLRGFDQ--EKAAPLIALANYIAYR 362
Query: 327 E 327
+
Sbjct: 363 Q 363
>gi|157965847|gb|ABW06960.1| geranylgeranyl diphosphate synthase [Corylus avellana]
Length = 373
Score = 244 bits (622), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 185/301 (61%), Gaps = 21/301 (6%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
F+ KTY ++Q L+ A+++K P +I+E+MRYS+LA G KR P++C+AACEL G
Sbjct: 80 FNFKTYMLQKANSVNQALDAAVSLKDPRKIHEAMRYSLLAGG-KRVRPMLCIAACELVGG 138
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A P AC++EM+H SLIHDDLPCMD+D RRG+P+NH V+G D+A+LAGDAL
Sbjct: 139 TESIAMPAACSVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFS 198
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQE 213
F+HI T VP R+LR I E+AR++G+ G+ AGQ +D+ EG ++ +EF+
Sbjct: 199 FEHIAVSTEG--VPPARILRAIGELARSIGAEGLVAGQVVDICSEGLSDVGLEHLEFIHL 256
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K + E + V G L G ++E++ LR + R +G+L+QVVDDIL+ T +E K
Sbjct: 257 HKTAALLEGAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDV---TKSSQELGK 313
Query: 274 KKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK VA GVEK+ E AE+L A+++L F + PL + +Y A R
Sbjct: 314 TAGKDLVADKVTYPKLMGVEKSREFAEKLNKDAQDQLAGFD--AEKAAPLIALANYIAHR 371
Query: 327 E 327
+
Sbjct: 372 Q 372
>gi|224096916|ref|XP_002310785.1| predicted protein [Populus trichocarpa]
gi|222853688|gb|EEE91235.1| predicted protein [Populus trichocarpa]
Length = 365
Score = 244 bits (622), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 130/305 (42%), Positives = 189/305 (61%), Gaps = 21/305 (6%)
Query: 36 RSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
R FD K+Y +++ L+ A+++K P +I+ESMRYS+LA G KR PV+C+AAC+
Sbjct: 68 RKPTFDFKSYMLQKANSVNKALDAAVSLKEPAKIHESMRYSLLA-GGKRVRPVLCLAACD 126
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
L G + A P ACA+EM+H SL+HDDLPCMD+D RRG+P+NH V+G D+A+LAGDAL
Sbjct: 127 LVGGSESMALPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAGDAL 186
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VE 209
F+HI T H+ P R++R I E+A+A+G+ G+ AGQ +D+ EG + +E
Sbjct: 187 LSFAFEHIAVST-IHVSP-LRIVRAIGELAKAIGAEGLVAGQVVDICSEGLSEVGLEQLE 244
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
F+ K ++ E + V G L G D+E++ LR Y R++G+L+QVVDDIL+ T +
Sbjct: 245 FIHVHKTAKLLEGAVVLGAILGGGTDEEVEKLRTYARSIGLLFQVVDDILDV---TKSSQ 301
Query: 270 EKKKKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
E K GK VA G+EK+ E AE L +AK+ L F + + PL + +Y
Sbjct: 302 ELGKTAGKDLVADKVTYPRLMGIEKSREFAERLLNEAKDMLAGFNQ--EKAAPLIALANY 359
Query: 323 AADRE 327
A R+
Sbjct: 360 IAYRQ 364
>gi|255580739|ref|XP_002531191.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223529232|gb|EEF31206.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
Length = 372
Score = 243 bits (620), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 128/300 (42%), Positives = 184/300 (61%), Gaps = 20/300 (6%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
F + Y T +++ L++AI ++ P +I+++MRYS+LA G KR PV+C+AACEL G
Sbjct: 80 FPFEEYMATKAKHVNKALDEAIPLQNPVKIHDAMRYSLLA-GGKRVRPVLCIAACELVGG 138
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+ A P ACA+EM+H SLIHDDLPCMD+D RRG+P+NH ++G + AILAGDAL
Sbjct: 139 DEATAMPAACAMEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKMFGEETAILAGDALLSFS 198
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEK 214
F+H+ T V RV+R IAE+ AVGS G+ AGQ +D++ E V E++
Sbjct: 199 FEHVARSTKN--VSPDRVVRAIAELGSAVGSEGLVAGQIVDIDSEGKDVSVSDLEYIHIH 256
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKK 274
K ++ E S VCG L GADD+ ++ +R+Y R +G+L+QVVDDIL+ T EE K
Sbjct: 257 KTAKLLEASVVCGAILGGADDESVERVRKYARCIGLLFQVVDDILDV---TKSSEELGKT 313
Query: 275 KGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
GK +Y G+++A ++A +L +A +EL F PLY F +Y A R+
Sbjct: 314 AGKDLITDKATYPKLMGIDEARKLAAKLVDQANQELAYFDSA--KAAPLYHFANYIASRQ 371
>gi|302843854|ref|XP_002953468.1| hypothetical protein VOLCADRAFT_109214 [Volvox carteri f.
nagariensis]
gi|300261227|gb|EFJ45441.1| hypothetical protein VOLCADRAFT_109214 [Volvox carteri f.
nagariensis]
Length = 312
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 130/305 (42%), Positives = 182/305 (59%), Gaps = 14/305 (4%)
Query: 32 ASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCV 91
A + FD Y +++ L++A+ KYP+ +YESMRYS+LA G KR P +C+
Sbjct: 12 ADSWNAGSFDFNQYMVDRAKLVNKALDEAVPQKYPDTLYESMRYSLLA-GGKRVRPALCL 70
Query: 92 AACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILA 151
AACEL G + AA P ACA+EM+H SLIHDDLP MD+D RRG+P+NH VYG DIAIL+
Sbjct: 71 AACELIGGDVQAALPAACAMEMIHTMSLIHDDLPSMDNDDFRRGRPTNHKVYGEDIAILS 130
Query: 152 GDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP-----N 206
GDAL F+HI T V RVLRVI E+ RA G+ G+ AGQ +D++ E +
Sbjct: 131 GDALLTYAFEHIARATKG--VSAERVLRVIMELGRATGAEGLVAGQVVDIQSEDKEVGLD 188
Query: 207 LVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP 266
+++++ K + E S VCG + GAD+ I+ LR+Y R +G+ +QVVDDIL+ T
Sbjct: 189 VLKYIHLHKTAALLEASVVCGAIVGGADEATIEKLRKYSRNIGLAFQVVDDILDVTQTTE 248
Query: 267 RDEEKKKK----KGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
+ + K +Y G+EK+ EVAE+L +A ++LD F K PL + Y
Sbjct: 249 QLGKTAAKDLAVNKTTYPKLLGLEKSREVAEQLINEAIQQLDGFDKV--KAAPLVALAKY 306
Query: 323 AADRE 327
R+
Sbjct: 307 IGYRQ 311
>gi|291170333|gb|ADD82422.1| geranylgeranyl diphosphate synthase [Jatropha curcas]
Length = 370
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 132/323 (40%), Positives = 199/323 (61%), Gaps = 20/323 (6%)
Query: 17 PRKFPVRCSSLPVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYS 76
P P+ + +S + ++ F + Y +++ L+KA+ + +P +I+ +MRYS
Sbjct: 55 PVTQPLETTQESLSFSPKILLPNFPFEEYMVLKANNVNEALDKAVPLNHPLKIHAAMRYS 114
Query: 77 VLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQ 136
+LA G KR P++C+AACEL G + AA P+ACA+EM+H SLIHDDLPCMD+D RRG+
Sbjct: 115 LLAGG-KRVRPILCIAACELVGGDEAAAMPSACAMEMIHTMSLIHDDLPCMDNDDLRRGK 173
Query: 137 PSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAG 196
P+NH ++G + AILAGDA+ L F+HI T ++ PE RV+RVI E+ AVGS G+ AG
Sbjct: 174 PTNHKMFGEETAILAGDAMLSLAFEHIARAT-KNVSPE-RVVRVITELGSAVGSEGLVAG 231
Query: 197 QFLDL--EG-EPNL--VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVL 251
Q +D+ EG E N+ +E++ K ++ E + VCG GADD+ I+ +R+Y R +G+L
Sbjct: 232 QIVDVCSEGKEVNVKDLEYIHIHKTAKLLEAAVVCGAIAGGADDESIERVRKYARCIGLL 291
Query: 252 YQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELD 304
+QV+DDIL+ T EE K GK +Y G+++A ++A +L +A +EL
Sbjct: 292 FQVIDDILDV---TKSSEELGKTAGKDLVSDKATYPKLLGIDEARKLAAKLVDEANQELA 348
Query: 305 RFKKYGDNVLPLYSFIDYAADRE 327
F PLY F +Y A R+
Sbjct: 349 YFDSA--KAAPLYHFANYIASRQ 369
>gi|168203183|gb|ACA21462.1| geranylgeranyl diphosphate synthase 6 [Picea abies]
Length = 385
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 186/301 (61%), Gaps = 21/301 (6%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
F+ K Y + I++ L+K +++++PE+I+E+MRYS+LA G KR P++C+A+CEL G
Sbjct: 92 FEFKKYMFSKANAINEALDKCVSLRHPEKIHEAMRYSLLAGG-KRVRPILCIASCELVGG 150
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+ + P+ACA+EM+H SLIHDDLPCMD+D RRG+P+NH V+G D+A+LAGDAL
Sbjct: 151 SEESVMPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFA 210
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLE--GEPN----LVEFVQE 213
F+HI T V +VLRVI E+ RA+GS G+ AGQ +DL G N L+E++
Sbjct: 211 FEHIACSTKG--VEAEKVLRVIWELGRAIGSEGLVAGQVVDLSSGGLSNVGLDLLEYIHV 268
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K + E S V G + G D+EI+ LRR+ R +G+++QVVDDIL+ T +E K
Sbjct: 269 HKTAALLEGSVVIGAIIGGGSDEEIERLRRFARCIGLMFQVVDDILDV---TKSSQELGK 325
Query: 274 KKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
K VA G+EK+ E A+EL +A +++ F + PL DY A R
Sbjct: 326 TACKDLVADKLTYPKLLGLEKSREFAQELNKQAMDQISVFDV--EKAKPLICLADYIAHR 383
Query: 327 E 327
+
Sbjct: 384 Q 384
>gi|6277254|dbj|BAA86284.1| geranylgeranyl pyrophosphate synthase [Croton sublyratus]
Length = 368
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 131/304 (43%), Positives = 190/304 (62%), Gaps = 21/304 (6%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
S FD K+Y + I+Q LE A++++ P +I+ESMRYS+LA G KR P +C+AACEL
Sbjct: 72 SLGFDFKSYMVQKASAINQALEAAVSLREPLKIHESMRYSLLA-GGKRVRPALCLAACEL 130
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
G + A P ACA+EM+H SLIHDDLPCMD+D RRG+P+NH V+G ++A+LAGDAL
Sbjct: 131 VGGDESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGENVAVLAGDALL 190
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EG--EPNL--VEF 210
F+HI T V R++R + E+A+A+G+ G+ AGQ +D+ EG E +L +EF
Sbjct: 191 AFAFEHIAVSTLN--VSPVRIVRGVGELAKAIGAEGLVAGQVVDICSEGLSEVDLEKLEF 248
Query: 211 VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEE 270
+ K ++ E + V G + G D+E++ LR+Y R +G+L+QVVDDIL+ T +E
Sbjct: 249 IHIHKTAKLLEGAVVLGAIMGGGTDEEVEKLRKYARDIGLLFQVVDDILDV---TKSSQE 305
Query: 271 KKKKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYA 323
K GK VA G+EK+ E AE+L +A+E+L F + PL + +Y
Sbjct: 306 LGKTAGKDLVADKVTYPKLMGIEKSREFAEKLNKEAQEQLAGFDP--EKAAPLIALANYI 363
Query: 324 ADRE 327
A R+
Sbjct: 364 AYRQ 367
>gi|224133886|ref|XP_002327704.1| predicted protein [Populus trichocarpa]
gi|222836789|gb|EEE75182.1| predicted protein [Populus trichocarpa]
Length = 366
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 186/301 (61%), Gaps = 21/301 (6%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
FD K+Y +++ L+ A+T+K P +I+ESMRYS+LA G KR PV+C+AACEL G
Sbjct: 73 FDFKSYMIQKANSVNKALDTAVTLKEPAKIHESMRYSLLAGG-KRVRPVLCLAACELVGG 131
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+ A P ACA+EM+H SLIHDDLPCMD+D RRG+ +NH V+G D+A+LAGDAL
Sbjct: 132 SESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKSTNHIVFGEDVAVLAGDALLAFA 191
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQE 213
F+HI T V R++R + E+A+ +G+ G+ AGQ +D+ EG + +EF+
Sbjct: 192 FEHIAVSTLN--VSPLRIVRAVGELAKVIGAEGLVAGQVVDICSEGLSEVGLEQLEFIHI 249
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K ++ E + V G L G D+E++ LRRY R++G+L+QVVDDIL+ T +E K
Sbjct: 250 HKTAKLLEGAVVLGAILGGGTDEEVEKLRRYARSIGLLFQVVDDILDV---TKSSQELGK 306
Query: 274 KKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK VA G+EK+ E AE+L +A+E L F + + PL + +Y A R
Sbjct: 307 TAGKDLVADKVTYPKLMGIEKSREFAEKLLNEARELLAGFDQ--EKAAPLIALANYIAYR 364
Query: 327 E 327
+
Sbjct: 365 Q 365
>gi|229915240|gb|ACQ90682.1| geranyl diphosphate synthase large subunit [Humulus lupulus]
Length = 369
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 185/305 (60%), Gaps = 21/305 (6%)
Query: 36 RSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
+ + F+ K+Y ++Q L+ A+ ++ P+ I+E+MRYS+LA G KR PV+C++ACE
Sbjct: 72 QKSTFNFKSYMVQKANSVNQALDAAVLLREPQMIHEAMRYSLLAGG-KRVRPVLCLSACE 130
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
L G + A P ACA+EM+H SLIHDDLPCMD+D RRG+P+NH V+G D+A+LAGDAL
Sbjct: 131 LVGGDESVAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDAL 190
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VE 209
F+H+ T VP R++R I E+A+++GS G+ AGQ +D+ EG N+ +E
Sbjct: 191 LAYAFEHVAVSTVG--VPAARIIRAIGELAKSIGSEGLVAGQVVDIDSEGLANVGLEQLE 248
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
F+ K + E S V G L G D++++ LR + R +G+L+Q VDDIL+ T +
Sbjct: 249 FIHLHKTAALLEASVVLGAILGGGTDEQVEELRSFARCIGLLFQAVDDILDV---TKSSQ 305
Query: 270 EKKKKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
E K GK VA G+EK+ E AE+L +A+E L F PL + +Y
Sbjct: 306 ELGKTAGKDLVADKATYPRLMGIEKSREFAEKLNREAQEHLGGFDP--QKAAPLIALANY 363
Query: 323 AADRE 327
A R+
Sbjct: 364 IAYRQ 368
>gi|4958920|dbj|BAA78047.1| GGPP synthase [Daucus carota]
Length = 367
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 134/301 (44%), Positives = 183/301 (60%), Gaps = 19/301 (6%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
+F + Y T +I++ L++A+ V+ P I+E+MRYS+LA G KR PV+C+A+CEL G
Sbjct: 73 EFHFEGYMKTSGKKINKALDEAVPVQKPAIIHEAMRYSLLAGG-KRVRPVLCIASCELVG 131
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
A P ACALEM+H SLIHDDLPCMD+D RRG+P+NH VYG + AILAGDAL L
Sbjct: 132 GLESWAMPMACALEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEETAILAGDALLSL 191
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL-----EGEPNLVEFVQE 213
F+H+ T +V RV+R IAE+ AVGS G+ AGQ +D+ + + N +E++
Sbjct: 192 AFEHVADATD--MVTPGRVVRAIAELGSAVGSQGLVAGQIMDICNQGKDVDLNDLEYIHV 249
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K ++ E S VCG L G + E++ LR+Y R +G+L+QVVDDIL+ T E K
Sbjct: 250 HKTSKLLEASVVCGAILGGGNVIEVERLRKYARCIGLLFQVVDDILDV---TKSSAELGK 306
Query: 274 KKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK +Y G+E+A A EL A+A+EEL F V PLY Y A R
Sbjct: 307 TAGKDLVTDKTTYPKLMGLERAKRFATELVAQAEEELSYFGSSA-RVAPLYHLAKYIAYR 365
Query: 327 E 327
+
Sbjct: 366 Q 366
>gi|121145|sp|P80042.1|GGPPS_CAPAN RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
Short=GGPP synthase; Short=GGPS; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|643094|emb|CAA56554.1| geranylgeranyl diphosphate synthase [Capsicum annuum]
Length = 369
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 183/301 (60%), Gaps = 21/301 (6%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
F+ K Y T +++ L++AI VK P I+E+MRYS+LA G KR P++C+AACEL G
Sbjct: 76 FNFKIYVTEKAISVNKALDEAIIVKEPHVIHEAMRYSLLA-GGKRVRPMLCLAACELVGG 134
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
N+ A ACA+EM+H SLIHDDLPCMD+D RRG+P+NH +YG D+A+LAGD+L
Sbjct: 135 NQENAMAAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDSLLAFA 194
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN------LVEFVQE 213
F+HIV+ T V R++ +AE+A+++G+ G+ AGQ D++ N +EF+
Sbjct: 195 FEHIVNSTAG--VTPSRIVGAVAELAKSIGTEGLVAGQVADIKCTGNASVSLETLEFIHV 252
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K + E S V G L G + E++ LRR+ R +G+L+QVVDDIL+ T EE K
Sbjct: 253 HKTAALLESSVVLGAILGGGTNVEVEKLRRFARCIGLLFQVVDDILDV---TKSSEELGK 309
Query: 274 KKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK +Y G+EKA E A EL +AK++L+ F PL + DY A R
Sbjct: 310 TAGKDLVVDKTTYPKLLGLEKAKEFAAELNREAKQQLEGFDSR--KAAPLIALADYIAYR 367
Query: 327 E 327
+
Sbjct: 368 D 368
>gi|297802274|ref|XP_002869021.1| hypothetical protein ARALYDRAFT_490952 [Arabidopsis lyrata subsp.
lyrata]
gi|297314857|gb|EFH45280.1| hypothetical protein ARALYDRAFT_490952 [Arabidopsis lyrata subsp.
lyrata]
Length = 379
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/284 (42%), Positives = 177/284 (62%), Gaps = 19/284 (6%)
Query: 38 TQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
+ FD +Y T +++ L+ A+ ++ P +I+E+MRYS+LA G KR PV+C+AACEL
Sbjct: 80 SSFDFMSYIITKAESVNKALDSAVPLREPLKIHEAMRYSLLAGG-KRVRPVLCIAACELV 138
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G A P ACA+EM+H SLIHDDLPCMD+D RRG+P+NH V+G D+A+LAGDAL
Sbjct: 139 GGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLS 198
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP--------NLVE 209
F+H+ S T +V RV+R I E+A+A+G+ G+ AGQ +D+ E +E
Sbjct: 199 FAFEHLASATSSDVVSPVRVVRAIGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLE 258
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
F+ K + E SAV G + G DDEI+ LR++ R +G+L+QVVDDIL+ T +
Sbjct: 259 FIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDV---TKSSK 315
Query: 270 EKKKKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRF 306
E K GK +A G+EK+ E A++L +A+++L F
Sbjct: 316 ELGKTAGKDLIADKLTYPKIMGLEKSREFADKLNREARDQLLGF 359
>gi|79154639|gb|ABB52066.1| putative geranylgeranyl pyrophosphate synthase [Daucus carota
subsp. sativus]
Length = 367
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 134/301 (44%), Positives = 182/301 (60%), Gaps = 19/301 (6%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
+F + Y T +I++ L++A+ V+ P I+E+MRYS+LA G KR PV+C+A+CEL G
Sbjct: 73 EFHFEGYMKTSGKKINKALDEAVPVQKPAIIHEAMRYSLLAGG-KRVRPVLCIASCELVG 131
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
A P ACALEM+H SLIHDDLPCMD+D RRG+P+NH VYG + AILAGDAL L
Sbjct: 132 GLESWAMPMACALEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEETAILAGDALLSL 191
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL-----EGEPNLVEFVQE 213
F+H+ T +V RV+R IAE+ AVGS G+ AGQ +D+ + + N +E++
Sbjct: 192 AFEHVADATD--MVTPGRVVRAIAELGSAVGSQGLVAGQIMDICNQGKDVDLNDLEYIHV 249
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K ++ E S VCG L G + E++ LR+Y R +G+L+QVVDDIL+ T E K
Sbjct: 250 HKTSKLLEASVVCGAILGGGNVIEVERLRKYARCIGLLFQVVDDILDV---TKSSAELGK 306
Query: 274 KKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK +Y G+E+A A EL A+A+EEL F V PLY Y A R
Sbjct: 307 TAGKDLVTDKTTYPKLMGLERAKRFATELVAQAEEELSYFGS-STRVAPLYHLAKYIAYR 365
Query: 327 E 327
Sbjct: 366 H 366
>gi|209526715|ref|ZP_03275238.1| Polyprenyl synthetase [Arthrospira maxima CS-328]
gi|376002372|ref|ZP_09780207.1| geranyltranstransferase [Arthrospira sp. PCC 8005]
gi|423067929|ref|ZP_17056719.1| geranylgeranyl diphosphate synthase [Arthrospira platensis C1]
gi|209492847|gb|EDZ93179.1| Polyprenyl synthetase [Arthrospira maxima CS-328]
gi|375329252|emb|CCE15960.1| geranyltranstransferase [Arthrospira sp. PCC 8005]
gi|406710557|gb|EKD05765.1| geranylgeranyl diphosphate synthase [Arthrospira platensis C1]
Length = 316
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 179/296 (60%), Gaps = 19/296 (6%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
FDL TY + ++ L+ AI V YPE+IYESMRYS++A G KR P++C+A CEL G
Sbjct: 24 FDLSTYLSQKKELVEAALDAAIAVTYPEKIYESMRYSLMAGG-KRLRPILCLATCELLGG 82
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A PTACALEM+H SLIHDDLP MD+D RRG+ +NH VYG DIAILAGD L
Sbjct: 83 TVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLSYA 142
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNLVE----FVQE 213
F+ + + T VP RVL+VI + RAVG+TG+ GQ +DL EG ++ E F+
Sbjct: 143 FEFVATQTQG--VPPERVLQVIGRLGRAVGATGLVGGQVVDLASEGLSDISEETLTFIHT 200
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K G + E VCG LAGA++ +++ L RY + +G+ +Q+VDDIL+ T E K
Sbjct: 201 HKTGALLEACVVCGAILAGANETDLERLSRYAKNIGLAFQIVDDILDI---TVPSSELGK 257
Query: 274 KKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
GK +Y + +G+EK+ A++L +AK EL F G + + FI Y
Sbjct: 258 TAGKDLEAQKATYPSLWGLEKSRAKAQQLVEEAKAELQAFGNGGCALAAIADFITY 313
>gi|116831085|gb|ABK28497.1| unknown [Arabidopsis thaliana]
Length = 348
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 125/305 (40%), Positives = 185/305 (60%), Gaps = 24/305 (7%)
Query: 38 TQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
FD +Y +++ L+ A++++ P +I+E++RYS+LA+G KR PV+C+AACEL
Sbjct: 51 NHFDFTSYMIGKANAVNEALDSAVSLREPIKIHEAIRYSLLARG-KRVRPVLCIAACELV 109
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G A P ACA+EM+H SLIHDDLPCMD+D RRG+P+NH V+G D+A+LAGDAL
Sbjct: 110 GGEESVALPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALIS 169
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG---EPN-----LVE 209
F+H+ + T V RV+R I E+A+A+GS G+ AGQ +DL + N ++E
Sbjct: 170 FAFEHLATSTA---VSPARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVLE 226
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
F+ K + E + V G + G D+E++ LRR+ R +G+L+QVVDDIL+ T E
Sbjct: 227 FIHVHKTAVLLEAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDV---TKSSE 283
Query: 270 EKKKKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
E K GK +A G+EK+ + A++L + A E+L F V PL + +Y
Sbjct: 284 ELGKTAGKDLIADKLTYPKLMGLEKSKDFADKLLSDAHEQLHGFDS--SRVKPLLALANY 341
Query: 323 AADRE 327
A R+
Sbjct: 342 IAKRQ 346
>gi|15224197|ref|NP_179452.1| geranylgeranyl diphosphate synthase 7 [Arabidopsis thaliana]
gi|75268021|sp|Q9ZU77.1|GGPP7_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 7,
chloroplastic; Short=GGPP synthase 7; Short=GGPS7;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 7;
AltName: Full=Dimethylallyltranstransferase 7; AltName:
Full=Farnesyl diphosphate synthase 7; AltName:
Full=Farnesyltranstransferase 7; AltName:
Full=Geranyltranstransferase 7; Flags: Precursor
gi|4217998|gb|AAD12206.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|91806194|gb|ABE65825.1| geranylgeranyl pyrophosphate synthase/GGPP
synthetase/farnesyltranstransferase [Arabidopsis
thaliana]
gi|330251692|gb|AEC06786.1| geranylgeranyl diphosphate synthase 7 [Arabidopsis thaliana]
Length = 347
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 125/305 (40%), Positives = 185/305 (60%), Gaps = 24/305 (7%)
Query: 38 TQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
FD +Y +++ L+ A++++ P +I+E++RYS+LA+G KR PV+C+AACEL
Sbjct: 51 NHFDFTSYMIGKANAVNEALDSAVSLREPIKIHEAIRYSLLARG-KRVRPVLCIAACELV 109
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G A P ACA+EM+H SLIHDDLPCMD+D RRG+P+NH V+G D+A+LAGDAL
Sbjct: 110 GGEESVALPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALIS 169
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG---EPN-----LVE 209
F+H+ + T V RV+R I E+A+A+GS G+ AGQ +DL + N ++E
Sbjct: 170 FAFEHLATSTA---VSPARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVLE 226
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
F+ K + E + V G + G D+E++ LRR+ R +G+L+QVVDDIL+ T E
Sbjct: 227 FIHVHKTAVLLEAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDV---TKSSE 283
Query: 270 EKKKKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
E K GK +A G+EK+ + A++L + A E+L F V PL + +Y
Sbjct: 284 ELGKTAGKDLIADKLTYPKLMGLEKSKDFADKLLSDAHEQLHGFDS--SRVKPLLALANY 341
Query: 323 AADRE 327
A R+
Sbjct: 342 IAKRQ 346
>gi|428224789|ref|YP_007108886.1| farnesyl-diphosphate synthase [Geitlerinema sp. PCC 7407]
gi|427984690|gb|AFY65834.1| farnesyl-diphosphate synthase [Geitlerinema sp. PCC 7407]
Length = 315
Score = 241 bits (615), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 132/304 (43%), Positives = 178/304 (58%), Gaps = 22/304 (7%)
Query: 36 RSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
R T FDLK Y T +++ L+ ++ + YPE +YE+MRYS+LA G KR P++C+A CE
Sbjct: 19 RETPFDLKAYLTARQVQVEAALDASVPMSYPETVYEAMRYSLLAGG-KRLRPILCLATCE 77
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
L G A PTACALEM+H SLIHDDLP MD+D RRG+ +NH VYG D+AILAGD L
Sbjct: 78 LAGGTSEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGDGL 137
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP------NLVE 209
F++I S T VP RVL+V+ ++ARAVG+ G+ GQ +DLE E +
Sbjct: 138 LAYSFEYIASQTRN--VPAERVLQVVTQVARAVGAAGLVGGQVVDLESEGRSDVSIETLN 195
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
++ K + E S V G LAGA + QSL RY + +G+ +Q+VDDIL+ T E
Sbjct: 196 YIHTHKTAALLEASVVSGAVLAGASAELQQSLSRYAQNIGLAFQIVDDILDI---TATQE 252
Query: 270 EKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
E K GK +Y + +G+E++ A +L AK ELD N PL + DY
Sbjct: 253 ELGKSVGKDLQAQKVTYPSLWGIEESQRQAAQLIESAKAELDATNP---NAQPLLAIADY 309
Query: 323 AADR 326
R
Sbjct: 310 IVAR 313
>gi|427712083|ref|YP_007060707.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 6312]
gi|427376212|gb|AFY60164.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 6312]
Length = 314
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 135/320 (42%), Positives = 186/320 (58%), Gaps = 24/320 (7%)
Query: 22 VRCSSLPVSAA--SQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLA 79
+ +L V AA S+ +F+LKTY ++Q LE +IT+ YPE+IY+SMRYS+LA
Sbjct: 2 ISAENLQVQAAPASRESGVEFNLKTYLQDRKALVEQALEASITITYPEKIYDSMRYSLLA 61
Query: 80 KGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSN 139
G KR P++C+A CEL G A PTACALEM+H SLIHDDLP MD+D RRG+ +N
Sbjct: 62 GG-KRLRPILCLATCELLGGTLEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTN 120
Query: 140 HTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFL 199
H VYG DIAILAGD L F+ +V +T V ++L+VI+ + AV +TG+ GQ +
Sbjct: 121 HKVYGEDIAILAGDGLLAYAFEFVVENTVG--VKAEKLLKVISRLGHAVAATGLVGGQVV 178
Query: 200 DLEGEP------NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQ 253
DLE E + F+ K G + E S + GG LAGA+ D +Q L Y R +G+ +Q
Sbjct: 179 DLESEGITEITIETLNFIHSHKTGALLEASVLSGGLLAGAEGDAVQRLTNYARNIGLAFQ 238
Query: 254 VVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRF 306
+VDD+L+ T EE K GK +Y + +G+E + A+ L AK EL F
Sbjct: 239 IVDDVLDI---TSTQEELGKSIGKDIQAQKVTYPSLWGIEASRVEAQRLVDLAKAELSPF 295
Query: 307 KKYGDNVLPLYSFIDYAADR 326
G +PL + D+ R
Sbjct: 296 ---GAAAIPLQAIADFITAR 312
>gi|428300108|ref|YP_007138414.1| farnesyl-diphosphate synthase [Calothrix sp. PCC 6303]
gi|428236652|gb|AFZ02442.1| farnesyl-diphosphate synthase [Calothrix sp. PCC 6303]
Length = 308
Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 133/314 (42%), Positives = 184/314 (58%), Gaps = 26/314 (8%)
Query: 31 AASQLRSTQ----FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAP 86
AA L+ TQ FDLK Y + L++A+ ++YPE IYE+MRYS++A G KR
Sbjct: 3 AADNLQKTQGQTTFDLKAYLKDRQQLCEAALDQAVPMRYPETIYEAMRYSLMAGG-KRLR 61
Query: 87 PVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVD 146
P++ +A CE+ G A PTACA+EMVH SLIHDDLP MD+D RRG+ +NH VYG D
Sbjct: 62 PILTIATCEMTGGTIEMAMPTACAMEMVHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGED 121
Query: 147 IAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN 206
IAILAGD L F++IV HT VP RVL+VI+ + RAVG+ G+ GQ +DLE E
Sbjct: 122 IAILAGDGLLAYAFEYIVEHTKD--VPAERVLKVISRLGRAVGAAGLVGGQVVDLESEGK 179
Query: 207 ------LVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILE 260
+ F+ K + E VCGG LAG +D++Q L RY + +G+ +Q++DDIL+
Sbjct: 180 TDTSLETLNFIHNHKTAALLEACVVCGGILAGVSEDDLQRLSRYSQNIGLAFQIIDDILD 239
Query: 261 AKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNV 313
T E+ K GK +Y + +G+E++ A +L A A +EL+ F G+
Sbjct: 240 I---TSTQEQLGKTAGKDLASQKVTYPSLWGIEESRNKANQLVADACQELEPF---GEKA 293
Query: 314 LPLYSFIDYAADRE 327
PL Y R+
Sbjct: 294 QPLMVIAHYITQRD 307
>gi|357483275|ref|XP_003611924.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
gi|355513259|gb|AES94882.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
Length = 371
Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 130/302 (43%), Positives = 186/302 (61%), Gaps = 21/302 (6%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
F+ Y +++ L++AI ++ PE+IYE+MRYS+LA G KR PV+C+AAC L G
Sbjct: 77 NFNFNGYMLEKANIVNKALDEAIVLQEPEKIYEAMRYSLLA-GGKRVRPVLCIAACGLVG 135
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
A+ P+ACA+EM+H SLIHDDLPCMD+D RRG+P+NH VYG D+A+LAGDAL
Sbjct: 136 GKEEASIPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLSF 195
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQ 212
F+H+ T VP R++R IAE+A+AVG G+ AGQ +DL EG+ N+ +EF+
Sbjct: 196 AFEHVAVSTIG--VPPERIVRAIAELAKAVGKEGLVAGQIVDLESEGKSNVGLETLEFIH 253
Query: 213 EKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKK 272
+K + E + V G + G +DEI+ LR++ R +G+L+QVVDDIL+ T EE
Sbjct: 254 LRKTAALLEAAVVMGAIVGGGTEDEIEKLRKFARYIGLLFQVVDDILDV---TKSSEELG 310
Query: 273 KKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAAD 325
K GK +Y G+EK+ E A++L A + L F + PL + +Y A
Sbjct: 311 KTAGKDLTADKATYPKLLGLEKSKEFADKLIKDAHDCLIGFDV--EKAAPLVALTNYIAY 368
Query: 326 RE 327
R+
Sbjct: 369 RQ 370
>gi|428206430|ref|YP_007090783.1| farnesyl-diphosphate synthase [Chroococcidiopsis thermalis PCC
7203]
gi|428008351|gb|AFY86914.1| farnesyl-diphosphate synthase [Chroococcidiopsis thermalis PCC
7203]
Length = 308
Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 130/301 (43%), Positives = 179/301 (59%), Gaps = 22/301 (7%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
FDL Y E++ LE +I V YPE+IYE+MRYS+LA G KR P++C+A CE+ G
Sbjct: 16 FDLSAYLKQRQVEVEAALESSIIVTYPEKIYEAMRYSLLAGG-KRLRPILCLATCEMAGG 74
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A PTACALEM+H SLIHDDLP MD+D RRG+ +NH VYG DIAILAGD L
Sbjct: 75 TVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGRLTNHKVYGDDIAILAGDGLLAYA 134
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE------PNLVEFVQE 213
F++I + T VP RVLR IA++ AVG+ G+ GQ +DLE E + + F+
Sbjct: 135 FEYIATQTKN--VPPERVLRAIAQLGHAVGAAGLVGGQVVDLESEGKSDVTADTLHFIHT 192
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K + E V GG LAG ++ ++Q L RY + +G+ +Q++DDIL+ A EE K
Sbjct: 193 HKTAALLEACVVSGGVLAGLEESDLQRLSRYAQNIGLAFQIIDDILDVTATA---EELGK 249
Query: 274 KKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK +Y + +G+E++ A+ L A AKEEL F + PL + D+ +R
Sbjct: 250 TAGKDLQAQKVTYPSLWGIEESRRQAQALIATAKEELTPFSEKAQ---PLIALADFITNR 306
Query: 327 E 327
+
Sbjct: 307 K 307
>gi|158104429|gb|ABD92926.2| geranylgeranyl diphosphate synthase [Stevia rebaudiana]
Length = 361
Score = 241 bits (614), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 125/302 (41%), Positives = 187/302 (61%), Gaps = 20/302 (6%)
Query: 38 TQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
T F+ +Y + +++ L+ ++ +K P +I+ESMRYS+LA G KR P+MC+AACE+
Sbjct: 67 TPFNFDSYMLEKVNMVNEALDASVPLKDPIKIHESMRYSLLAGG-KRIRPMMCIAACEIV 125
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G N + A P ACA+EM+H SL+HDDLPCMD+D RRG+P +H VYG ++A+L GDAL
Sbjct: 126 GGNILNAMPAACAVEMIHTMSLVHDDLPCMDNDDFRRGKPISHKVYGEEMAVLTGDALLS 185
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP-----NLVEFVQ 212
L F+HI + T V + R++R I E+AR+VGS G+ AGQ +D+ E + +E++
Sbjct: 186 LSFEHIATATKG--VSKDRIVRAIGELARSVGSEGLVAGQVVDILSEGADVGLDHLEYIH 243
Query: 213 EKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKK 272
K + E S V G + G D +I+ LR++ R++G+L+QVVDDIL+ T EE
Sbjct: 244 IHKTAMLLESSVVIGAIMGGGSDQQIEKLRKFARSIGLLFQVVDDILDVTKST---EELG 300
Query: 273 KKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAAD 325
K GK +Y G+EK+ E AE+L +A+E+L F + PL + +Y A
Sbjct: 301 KTAGKDLLTDKTTYPKLLGIEKSREFAEKLNKEAQEQLSGFDRR--KAAPLIALANYNAY 358
Query: 326 RE 327
R+
Sbjct: 359 RQ 360
>gi|290575614|gb|ADD49734.1| geranylgeranyl diphosphate synthase [Nicotiana tabacum]
Length = 366
Score = 241 bits (614), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 140/341 (41%), Positives = 197/341 (57%), Gaps = 35/341 (10%)
Query: 10 NPPCVCLPRKFPVRCSSLPVSAAS----------QLRSTQFDLKTYWTTLITEIDQNLEK 59
NP + R F S+L VSA + + + QF+ KTY +++ L++
Sbjct: 37 NPSFLKQKRPF----SALSVSAIATKEDEKVKEVETQKEQFNFKTYVAEKAISVNKALDE 92
Query: 60 AITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASL 119
A+ VK P I+E+MRYS+LA G KR P++C+AACEL G ++ A P ACA+EM+H SL
Sbjct: 93 AVIVKDPPVIHEAMRYSLLAGG-KRVRPMLCLAACELVGGDQSNAMPAACAVEMIHTMSL 151
Query: 120 IHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLR 179
IHDDLPCMD+D RRG+P+NH VYG D+A+LAGD+L F++I + T V R+L
Sbjct: 152 IHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDSLLAFAFEYIATATAG--VSPSRILA 209
Query: 180 VIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQEKKFGEMSECSAVCGGFLAGA 233
I E+A+++G+ G+ AGQ D+ G PN+ +EF+ K + E S V G L G
Sbjct: 210 AIGELAKSIGTEGLVAGQVADIACTGNPNVGLDTLEFIHIHKTAALLEASVVLGAILGGG 269
Query: 234 DDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVE 286
D+E++ LR + R +G+L+QVVDDIL+ T E K GK +Y G+E
Sbjct: 270 TDEEVEKLRIFARCIGLLFQVVDDILDV---TKSSEVLGKTAGKDLAVDKTTYPKLLGLE 326
Query: 287 KAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
KA E A EL AK++L F + PL + DY A RE
Sbjct: 327 KAKEFAAELNRDAKQQLVEFDPH--KAAPLIALADYIAYRE 365
>gi|426322797|gb|AFY26193.1| geranylgeranyl diphosphate synthase [Picrorhiza kurrooa]
Length = 354
Score = 240 bits (613), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 135/340 (39%), Positives = 196/340 (57%), Gaps = 31/340 (9%)
Query: 7 LLANPPCVCLPRKFP-VRCSSLPVSA-----ASQLRSTQFDLKTYWTTLITEIDQNLEKA 60
L +NP KF + C PVSA + S FD K+Y +++ L+ +
Sbjct: 26 LFSNPNS----NKFDFINCLQKPVSAILTKDQNFETSPTFDFKSYMLEKANSVNKALDDS 81
Query: 61 ITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLI 120
I + P +I+ESMRYS+LA G KR P++C+AACEL G A P ACA+EMVH SL+
Sbjct: 82 IPLTEPLKIHESMRYSLLAGG-KRIRPLLCIAACELVGGEESTAMPAACAVEMVHTMSLM 140
Query: 121 HDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRV 180
HDDLPCMD+D RRG+P+NH ++ D+A+LAGDA+ L F+H+ + T VP R++RV
Sbjct: 141 HDDLPCMDNDDLRRGKPTNHKIFSEDVAVLAGDAMLALSFEHVATSTKG--VPSERIIRV 198
Query: 181 IAEIARAVGSTGMAAGQFLDLEGEP------NLVEFVQEKKFGEMSECSAVCGGFLAGAD 234
I E+A+ +G G+ AGQ +D+ E +EF+ K + E S V G L G
Sbjct: 199 IYELAKCIGCEGLVAGQVVDISSEGMTQVGLEHLEFIHSNKTAALLEGSVVLGALLGGGS 258
Query: 235 DDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVA-------FYGVEK 287
D+E++ LR++ R +G+L+QVVDDIL+ T +E K GK VA G+EK
Sbjct: 259 DEEVEKLRKFARCIGLLFQVVDDILDV---TKSSKELGKTAGKDLVADKTTYPKLIGIEK 315
Query: 288 AMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+ E AE L +A+++L F + + PL + +Y A R+
Sbjct: 316 SREFAERLNREAQDQLLGF--HHNKAAPLIALANYIAYRD 353
>gi|6277256|dbj|BAA86285.1| geranylgeranyl pyrophosphate synthase [Scoparia dulcis]
Length = 351
Score = 240 bits (613), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 134/318 (42%), Positives = 196/318 (61%), Gaps = 26/318 (8%)
Query: 28 PVSAA-----SQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGT 82
P+SA S S+ FD K Y + +++ LE A+++K P +I+ESMRYS+LA G
Sbjct: 41 PISAVLTKEYSHQTSSTFDFKKYMLEKASSVNKALESAVSLKEPLKIHESMRYSLLAGG- 99
Query: 83 KRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTV 142
KR P++C+AACEL G + A P AC++EM+H SL+HDDLPCMD+D RRG P+NH V
Sbjct: 100 KRVRPMLCLAACELVGGHPSTAMPAACSIEMIHTMSLMHDDLPCMDNDHLRRGHPTNHIV 159
Query: 143 YGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL- 201
+G D+A+LAGDAL F+++ + T ++PE R++RVIAE+A+ + S G+ AGQ +D+
Sbjct: 160 FGEDVAVLAGDALLAYSFEYLATATEG-VLPE-RIVRVIAELAKCIRSEGLLAGQVVDIC 217
Query: 202 -EGEPNL----VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVD 256
EG + +E++ K + E S V G L G +D+E++ LR++ R +G+L+QVVD
Sbjct: 218 SEGVSEIGLEHLEYIHLHKTAALLEGSVVLGAILGGGNDEEVERLRKFARCIGLLFQVVD 277
Query: 257 DILEAKAQTPRDEEKKKKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKY 309
DIL+ T E K GK VA G+EK+ E AE+L +A+E+L F
Sbjct: 278 DILDV---TKTSVELGKTAGKDLVADKTTYPKLIGIEKSREFAEKLNREAQEQLVGFDS- 333
Query: 310 GDNVLPLYSFIDYAADRE 327
D PL + +Y A RE
Sbjct: 334 -DKAAPLIALANYIAYRE 350
>gi|434391876|ref|YP_007126823.1| farnesyl-diphosphate synthase [Gloeocapsa sp. PCC 7428]
gi|428263717|gb|AFZ29663.1| farnesyl-diphosphate synthase [Gloeocapsa sp. PCC 7428]
Length = 308
Score = 240 bits (612), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 129/300 (43%), Positives = 179/300 (59%), Gaps = 22/300 (7%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
FDL Y ++++ L++AI + YPE+IYE+MRYS+LA G KR P++C+A CEL G
Sbjct: 16 FDLPAYLQQRQSQVEAALDRAIPIAYPEKIYEAMRYSLLAGG-KRLRPILCLATCELAGG 74
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A PTACALEM+H SLIHDDLP MD+D RRG +NH VYG DIAILAGD L
Sbjct: 75 TTEMAIPTACALEMIHTMSLIHDDLPAMDNDDYRRGMLTNHKVYGEDIAILAGDGLLAYA 134
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP------NLVEFVQE 213
F+++ + T VP PRVL+VI+ + RAVG+ G+ GQ +DLE E + + F+
Sbjct: 135 FEYVAAKTEN--VPAPRVLQVISRLGRAVGAAGLVGGQVVDLESEGKADVSIDTLNFIHN 192
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K + E CG LAGA + ++Q L RY + +G+ +Q+VDDIL+ T EE K
Sbjct: 193 HKTAALLEACVACGAILAGAPEADLQRLTRYAQNIGLAFQIVDDILDI---TATQEELGK 249
Query: 274 KKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK +Y + +G+E++ A +L A ELD F G+ LPL + ++ R
Sbjct: 250 TAGKDLQAQKATYPSIWGLEESQRQARQLIQAAIAELDSF---GEKALPLQAIAEFITSR 306
>gi|428203147|ref|YP_007081736.1| geranylgeranyl pyrophosphate synthase [Pleurocapsa sp. PCC 7327]
gi|427980579|gb|AFY78179.1| geranylgeranyl pyrophosphate synthase [Pleurocapsa sp. PCC 7327]
Length = 309
Score = 240 bits (612), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 131/309 (42%), Positives = 184/309 (59%), Gaps = 22/309 (7%)
Query: 32 ASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCV 91
A + +S+ FDL +Y ++ LE+++++ PE+IYE+MRYS+LA G KR P++C+
Sbjct: 9 AEEKQSSNFDLASYLEEKKQLVEAALERSLSIGKPEKIYEAMRYSLLAGG-KRLRPILCL 67
Query: 92 AACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILA 151
A CEL G A PTACALEM+H SLIHDDLP MD+D RRG+ +NH V+G DIAILA
Sbjct: 68 ATCELTGGTTEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILA 127
Query: 152 GDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP------ 205
GD L F+++ + T VP R+L VIA + R VG+ G+ GQ LDLE E
Sbjct: 128 GDGLLAYAFEYVAAQTQN--VPPQRILDVIARLGRTVGAAGLVGGQVLDLESEGKSDISV 185
Query: 206 NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT 265
+ + F+ K G + E S V G LAGA DDEIQ L +Y + +G+ +Q+VDDIL+ T
Sbjct: 186 DTLTFIHTHKTGALLETSVVSGAMLAGASDDEIQRLSKYAQDIGLAFQIVDDILDI---T 242
Query: 266 PRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYS 318
EE K GK +Y + +G+E++ + A++L A EL YG+ PL +
Sbjct: 243 ATQEELGKTAGKDLQAQKATYPSLWGLEESRKQAQQLVDAAIAEL---ASYGEGAEPLRA 299
Query: 319 FIDYAADRE 327
Y R+
Sbjct: 300 IASYIVTRK 308
>gi|56122559|gb|AAV74397.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
palaestina]
Length = 359
Score = 240 bits (612), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 126/311 (40%), Positives = 187/311 (60%), Gaps = 20/311 (6%)
Query: 29 VSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPV 88
++ + + F + Y + ++Q L+ ++ +++P +I+E+MRYS+LA G KR P+
Sbjct: 56 IAETQSYKESAFQFEEYMAEMAERVNQALDDSVPLRHPLKIHEAMRYSLLAGG-KRVRPI 114
Query: 89 MCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIA 148
+C+A+CEL G + +AA P ACALEM+H SLIHDDLPCMD+D RRG P+NH +G + A
Sbjct: 115 LCIASCELVGGDPVAAHPIACALEMIHTMSLIHDDLPCMDNDDFRRGMPTNHKAFGEETA 174
Query: 149 ILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG----- 203
+LAGDAL L F+H+ + + V RV+RVIAE+ + VGS G+ GQ +D+
Sbjct: 175 VLAGDALLSLAFEHVATRSTG--VSADRVVRVIAELGKCVGSDGLVGGQIVDIASAGKQI 232
Query: 204 EPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA 263
E + +E++ K + E S VCG + G +I+ LR+Y R +G+L+QVVDDIL+
Sbjct: 233 ELSELEYIHLHKTAILLEASVVCGAIMGGGMAPDIERLRKYARYIGLLFQVVDDILDV-- 290
Query: 264 QTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPL 316
T EE K GK +Y G++KA E A+ L A+A +ELD + PL
Sbjct: 291 -TKSSEELGKTAGKDLATDKATYPKLMGIDKAKEFADALVAQAHKELDYYDFA--KAAPL 347
Query: 317 YSFIDYAADRE 327
Y F DY A R+
Sbjct: 348 YHFADYIAYRQ 358
>gi|443314084|ref|ZP_21043676.1| geranylgeranyl pyrophosphate synthase [Leptolyngbya sp. PCC 6406]
gi|442786319|gb|ELR96067.1| geranylgeranyl pyrophosphate synthase [Leptolyngbya sp. PCC 6406]
Length = 306
Score = 240 bits (612), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 131/300 (43%), Positives = 181/300 (60%), Gaps = 22/300 (7%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
FDLKTY + ++ L+ ++ + YPE IYE+MRYS+LA G KR P++C+AACEL G
Sbjct: 14 FDLKTYLSDRQKRVEAALDASLPLAYPETIYEAMRYSLLAGG-KRLRPILCLAACELMGG 72
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A PTACALEMVH SLIHDDLP MD+D RRGQ +NH VYG D+AILAGDAL
Sbjct: 73 TTAQAMPTACALEMVHTMSLIHDDLPAMDNDDYRRGQLTNHKVYGEDVAILAGDALLTYA 132
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL------VEFVQE 213
F+HI +T VP RVLRVIA++ RAVG+ G+ GQ +DL E +L + ++
Sbjct: 133 FEHIARYTTD--VPADRVLRVIADLGRAVGAEGLVGGQIVDLASEGDLEVTVDTLNYIHV 190
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K G + E S G LAGA + I +L Y + +G+ +Q+VDD+L+ A + EE K
Sbjct: 191 HKTGALLELSVTSGAILAGAGETAIATLSGYAQRIGLAFQIVDDVLDITATS---EELGK 247
Query: 274 KKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK +Y +F+G++++ A++L +AK + G + PL + DY R
Sbjct: 248 SAGKDLQAQKATYPSFWGIDESRRQAQQLIDEAKAAV---LPLGADSAPLLALADYIVAR 304
>gi|290575616|gb|ADD49735.1| geranylgeranyl diphosphate synthase [Nicotiana tabacum]
Length = 365
Score = 239 bits (611), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 125/301 (41%), Positives = 183/301 (60%), Gaps = 20/301 (6%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
+FD + Y ++++ L+ AI ++ P +I+E+MRYS+LA G KR P++C+A+CE+ G
Sbjct: 72 KFDFEEYMKMKAIKVNKALDDAIPMQEPIKIHEAMRYSLLA-GGKRVRPILCMASCEVVG 130
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
+ A P AC++EM+H SLIHDDLPCMD+D RRG+P++H +G D A+L GDAL L
Sbjct: 131 GDESLAIPAACSVEMIHTMSLIHDDLPCMDNDDLRRGKPTSHKAFGEDTAVLTGDALLSL 190
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQE 213
F+H+ S T V RV++ + E+ AVGS G+ AGQ +D+ E V E++
Sbjct: 191 AFEHVASKTKD--VTPQRVVQAVGELGSAVGSKGLVAGQIVDIASEGKQVSLTELEYIHN 248
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K G++ E + VCG + G ++ E++ +R Y R +G+L+QVVDDIL+ T EE K
Sbjct: 249 HKTGKLLEAAVVCGAIIGGGNEIEVERMRNYARCLGLLFQVVDDILDV---TKSSEELGK 305
Query: 274 KKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK +Y G+EKA E+A EL AKA +EL F PLY F +Y A R
Sbjct: 306 TAGKDLVTDKATYPKLMGLEKARELAGELVAKAMDELSYFD--AAKAAPLYHFANYIAHR 363
Query: 327 E 327
+
Sbjct: 364 Q 364
>gi|113477591|ref|YP_723652.1| farnesyl-diphosphate synthase [Trichodesmium erythraeum IMS101]
gi|110168639|gb|ABG53179.1| farnesyl-diphosphate synthase [Trichodesmium erythraeum IMS101]
Length = 316
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 132/302 (43%), Positives = 181/302 (59%), Gaps = 22/302 (7%)
Query: 38 TQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
T FDL Y +++ L+ +I + YPE+IYE+MRYS+LA G KR P++C+A CEL
Sbjct: 22 TTFDLSNYLVERKALVEKALDNSIKIVYPEKIYEAMRYSLLAGG-KRLRPILCLATCELS 80
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G N A PTACALEM+H SLIHDDLP MD+D RRGQ +NH VYG DIAILAGD L
Sbjct: 81 GGNIEMAMPTACALEMIHTMSLIHDDLPSMDNDDYRRGQLTNHKVYGEDIAILAGDGLLS 140
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE------PNLVEFV 211
F+ +V+ T +++P+ +VL+VIA + +A G+ G+ GQ +DL E + F+
Sbjct: 141 YAFEFVVTQT-KNVLPK-QVLQVIARLGKASGAAGLVGGQVVDLASEGISQVSEKTLHFI 198
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
K G + E S VCG LA + L RY + +G+ +Q+VDDIL+ A T EE
Sbjct: 199 HTHKTGALLEASVVCGAILADVSQANLYRLERYAQNIGLAFQIVDDILDITATT---EEL 255
Query: 272 KKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAA 324
K GK +Y +G+EK+ A++L KAK EL+ F GD V+PL + D+
Sbjct: 256 GKTAGKDIEAKKATYPVIWGLEKSRFQAQKLVEKAKAELEVF---GDKVMPLIALADFII 312
Query: 325 DR 326
R
Sbjct: 313 SR 314
>gi|428215155|ref|YP_007088299.1| geranylgeranyl pyrophosphate synthase [Oscillatoria acuminata PCC
6304]
gi|428003536|gb|AFY84379.1| geranylgeranyl pyrophosphate synthase [Oscillatoria acuminata PCC
6304]
Length = 308
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/304 (42%), Positives = 183/304 (60%), Gaps = 22/304 (7%)
Query: 36 RSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
+ ++FDL TY ++ L++++ +K P IYE+MRYS+LA G KR P++C+A+CE
Sbjct: 12 KQSEFDLSTYLGERQALVEAALDQSLPIKPPSTIYEAMRYSLLAGG-KRLRPILCLASCE 70
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
L G A PTACALEMVH SLIHDDLP MD+D RRG+ +NH VYG DIAILAGD L
Sbjct: 71 LVGGTVEMAMPTACALEMVHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDIAILAGDGL 130
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL------VE 209
F+ + + T VP PRVL+ IA +A A G+ G+ GQ +D++ E L +
Sbjct: 131 LVYAFEVVATQTQN--VPAPRVLKAIAHLAHAFGADGVVGGQVVDIQCEGKLDTTVETLH 188
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
F+ K G + E VCG L GA D+++Q L RY + +G+ +Q++DDIL+ T E
Sbjct: 189 FIHTHKTGALLEACVVCGAILGGAADEDLQRLSRYAQNIGLAFQIIDDILDI---TKTQE 245
Query: 270 EKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
E K GK +Y + +G+E++ A+EL +AK EL F G+ +PL + D+
Sbjct: 246 ELGKTAGKDLQAQKATYPSIWGLEESTRQAQELIEQAKAELASF---GNKAIPLLTLADF 302
Query: 323 AADR 326
+R
Sbjct: 303 ITNR 306
>gi|224077270|ref|XP_002305196.1| predicted protein [Populus trichocarpa]
gi|222848160|gb|EEE85707.1| predicted protein [Populus trichocarpa]
Length = 365
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 121/300 (40%), Positives = 185/300 (61%), Gaps = 20/300 (6%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
F+ K Y ++++ L++A+ +++P++I E+MRYS+LA G KR P++C+A+CEL G
Sbjct: 73 FEFKEYMINKANQVNKALDEAVPLQHPQKINEAMRYSLLA-GGKRVRPILCIASCELVGG 131
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+ A P ACALEM+H SLIHDDLPCMD+D RRG+P++H ++G D A+LAGDAL L
Sbjct: 132 DEGLAMPAACALEMIHTMSLIHDDLPCMDNDDLRRGKPTSHKIFGEDTAVLAGDALLSLA 191
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP-----NLVEFVQEK 214
F+H+ +T V RV++ IAE+ VGS G+ AGQ +D++ E + +E++
Sbjct: 192 FEHVARNTKN--VSSDRVVQAIAELGSTVGSKGLVAGQIVDIDSEGKEVSLSTLEYIHVH 249
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKK 274
K ++ E + VCG + GAD ++ LR+Y R++G+L+QVVDDIL+ T EE K
Sbjct: 250 KTAKLLEAAVVCGAIMGGADATSVERLRKYARSIGLLFQVVDDILDV---TKSSEELGKT 306
Query: 275 KGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
GK +Y G+++A + A +L +A + L F PLY F +Y A R+
Sbjct: 307 AGKDLASDKATYPKLMGIDEAKKFAAQLVDEANQGLAFFDHV--KAAPLYHFANYIATRQ 364
>gi|334119738|ref|ZP_08493823.1| Farnesyltranstransferase [Microcoleus vaginatus FGP-2]
gi|333457900|gb|EGK86521.1| Farnesyltranstransferase [Microcoleus vaginatus FGP-2]
Length = 308
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 184/312 (58%), Gaps = 26/312 (8%)
Query: 32 ASQLRSTQ----FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPP 87
A+++ S+Q FDL TY I+ L+ A+ V YPE+IYE+MRYS+LA G KR P
Sbjct: 4 ATEMGSSQPESSFDLSTYLVKRKEAIEVALDSALPVIYPEKIYEAMRYSLLAGG-KRLRP 62
Query: 88 VMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDI 147
++C+A+CEL G A PTACALEM+H SLIHDDLP MD+D RRG+ +NH VYG DI
Sbjct: 63 ILCLASCELAGGTTSMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDI 122
Query: 148 AILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN- 206
AILAGD L F+ I + T VP +VL+ IA +ARA G+ G+ GQ +DLE E
Sbjct: 123 AILAGDGLLTYAFEFIATKTQN--VPPQQVLQTIAHLARASGAAGLVGGQVVDLESEGKT 180
Query: 207 -----LVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEA 261
+ ++ K G + E VCG LAGA ++Q L R+ + +G+ +Q++DDIL+
Sbjct: 181 DVSLETLNYIHAHKTGALLEACVVCGAILAGASAADLQRLSRFAQNIGLAFQIIDDILDI 240
Query: 262 KAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVL 314
T EE K GK +Y + +G+E++ A +L A AK++L F G L
Sbjct: 241 ---TATQEELGKTAGKDVQAGKVTYPSLWGIEESRRQASQLVADAKDQLAVF---GSKAL 294
Query: 315 PLYSFIDYAADR 326
PL + D+ R
Sbjct: 295 PLLAIADFITSR 306
>gi|356559416|ref|XP_003547995.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Glycine max]
Length = 367
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 125/301 (41%), Positives = 181/301 (60%), Gaps = 21/301 (6%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
FD K Y + + +++ L+ A++++ P++I+E+MRYS+LA G KR PV+CVAACEL G
Sbjct: 74 FDFKNYMVSKASAVNKALDDAVSLREPQKIHEAMRYSLLAGG-KRVRPVLCVAACELVGG 132
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A P ACA+EM+H SLIHDDLPCMD+D RRG+P+NH V+G D+A+LAGDAL
Sbjct: 133 EEATAMPAACAIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFA 192
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP------NLVEFVQE 213
F+HI + T R++R I E+AR++GS G+ AGQ +D+ E +EF+
Sbjct: 193 FEHIAAST--RGASPGRIVRAIGELARSIGSEGLVAGQVVDINSEGLADVDLERLEFIHV 250
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K + E + V G L G DDE++ LR++ R +G+L+QVVDDIL+ T +E K
Sbjct: 251 HKTAALLEGAVVLGAILGGGTDDEVEKLRKFARYIGLLFQVVDDILDV---TKSSQELGK 307
Query: 274 KKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK VA G+EK+ A +L A+++L F PL + +Y A R
Sbjct: 308 TAGKDLVADKVTYPKLLGIEKSKVFAAKLNKDAQDQLVGFDPV--KAAPLIALANYIAYR 365
Query: 327 E 327
+
Sbjct: 366 Q 366
>gi|224285135|gb|ACN40295.1| unknown [Picea sitchensis]
Length = 382
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 123/302 (40%), Positives = 184/302 (60%), Gaps = 20/302 (6%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
+FD Y ++Q L++A+ +++P++++ESMRYS+L+ G KR PV+C+AACEL G
Sbjct: 87 EFDFNKYMHAKAISVNQALDRAVPLRFPQKLHESMRYSILSGG-KRVRPVLCIAACELVG 145
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
A P ACA+EM+H +L+HDD+PC+D+D RRG+P+NH V+G A++AG AL +
Sbjct: 146 GTEELAMPIACAIEMIHVMTLLHDDMPCLDNDDIRRGKPTNHKVFGEGTALIAGVALLSV 205
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQ 212
F+HI T V R+LR+++E+ R GS G+ GQFLDL EG+ ++ ++++
Sbjct: 206 AFEHIAVSTSK-TVGNDRILRMVSELGRTTGSQGIMGGQFLDLVSEGDASVNLQTLQWIH 264
Query: 213 EKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKK 272
K + E S VCG + GA +DEI+ +RRY VG+L+QVVDDIL+ T EE
Sbjct: 265 AHKTAVLLESSVVCGAIIGGASEDEIERIRRYASCVGILFQVVDDILDV---TKSSEELG 321
Query: 273 KKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAAD 325
K GK +Y G+EK+ + + EL +AK+EL F PL + DY A
Sbjct: 322 KTAGKDLMSDKATYPKLMGLEKSKQFSIELLDRAKKELSYFDPA--KTAPLLALADYIAF 379
Query: 326 RE 327
R+
Sbjct: 380 RQ 381
>gi|295322739|gb|ADG01841.1| geranylgeranyl-diphosphate synthase [Medicago sativa]
Length = 370
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 131/333 (39%), Positives = 195/333 (58%), Gaps = 34/333 (10%)
Query: 21 PVRCSSLPVSAASQL-------------RSTQFDLKTYWTTLITEIDQNLEKAITVKYPE 67
P++ SS P S+ S L ++ F+ K+Y T +++ L+ A++++ P
Sbjct: 45 PIKPSSKPNSSFSVLSLLTKQEPIEAEEQNPIFNFKSYMIEKATRVNKALDDAVSLREPL 104
Query: 68 QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCM 127
+++E+MRYS+LA G KR PV+C+AACEL G A P ACA+EM+H SLIHDDLPCM
Sbjct: 105 KVHEAMRYSLLA-GGKRVRPVLCLAACELVGGTEPMAMPAACAVEMIHTMSLIHDDLPCM 163
Query: 128 DDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARA 187
D+D RRG+P+NH V+G D+A+LAGDAL F+HI T V R++R I E+A++
Sbjct: 164 DNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAVSTAG--VSPARIVRAIGELAKS 221
Query: 188 VGSTGMAAGQFLDLEGEP------NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSL 241
+GS G+ AGQ +D+ E +EF+ K + E + V G L G D++++ L
Sbjct: 222 IGSEGLVAGQVVDINSEGLSDVGLEQLEFIHLHKTAALLEGAVVLGAILGGGSDEDVEKL 281
Query: 242 RRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVA-------FYGVEKAMEVAEE 294
R++ R +G+L+QVVDDIL+ T +E K GK VA G+EK+ E AE+
Sbjct: 282 RKFARYIGLLFQVVDDILDV---TKSSQELGKTAGKDLVADKVTYPKLLGIEKSKEFAEK 338
Query: 295 LRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
L A+E+L F + PL + +Y A R+
Sbjct: 339 LNRDAQEQLSGFDL--NKSAPLIALANYIAYRQ 369
>gi|414076496|ref|YP_006995814.1| geranyltranstransferase [Anabaena sp. 90]
gi|413969912|gb|AFW94001.1| geranyltranstransferase [Anabaena sp. 90]
Length = 312
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 124/304 (40%), Positives = 181/304 (59%), Gaps = 21/304 (6%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
S F+L TY +Q L+ +ITV YPE+IYE+MRYS+LA G KR P++C+A ++
Sbjct: 16 SASFNLATYLKQRQQLCEQALDNSITVVYPEKIYEAMRYSLLAGG-KRVRPILCLATADM 74
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
G A TACA+EM+H SLIHDDLP MD+D RRG+ +NH VYG D+AILAGD L
Sbjct: 75 IGGTIEMAMATACAVEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGDGLL 134
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN------LVEF 210
L F+H+ + TP + VP RVL+VI + +A+G+ G+ GQ +DLE E + F
Sbjct: 135 ALAFEHVAAQTPTN-VPRDRVLQVIIRLGKALGAAGLVGGQVVDLESEGKSDISLETLNF 193
Query: 211 VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEE 270
+ K + E VCGG +AGA +++Q L RY + +G+ +Q++DDIL+ T E+
Sbjct: 194 IHNHKTAALLEACVVCGGIIAGASAEDVQKLTRYSQNIGLAFQIIDDILDI---TATQEQ 250
Query: 271 KKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYA 323
K GK +Y + +G+E++ A+ L A+A EL YG+ +PL + +
Sbjct: 251 LGKTAGKDLTAQKVTYPSLWGIEESRAKAQHLVAQACAEL---ASYGEKAIPLQALAHFI 307
Query: 324 ADRE 327
+R
Sbjct: 308 INRN 311
>gi|428320077|ref|YP_007117959.1| Farnesyltranstransferase [Oscillatoria nigro-viridis PCC 7112]
gi|428243757|gb|AFZ09543.1| Farnesyltranstransferase [Oscillatoria nigro-viridis PCC 7112]
Length = 308
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 182/312 (58%), Gaps = 26/312 (8%)
Query: 32 ASQLRSTQ----FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPP 87
A+++ S+Q FDL Y I+ L+ A+ V YPE IYE+MRYS+LA G KR P
Sbjct: 4 ATEMGSSQPESSFDLSAYLVKRKEAIEVALDSALPVIYPETIYEAMRYSLLAGG-KRLRP 62
Query: 88 VMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDI 147
++C+A+CEL G A PTACALEM+H SLIHDDLP MD+D RRG+ +NH VYG DI
Sbjct: 63 ILCLASCELAGGTTSMAIPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDI 122
Query: 148 AILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN- 206
AILAGD L F+ I + T VP +VL+ IA +ARA G+ G+ GQ +DLE E
Sbjct: 123 AILAGDGLLTYAFEFIATKTQN--VPPQQVLQTIAHLARASGAAGLVGGQVVDLESEGKT 180
Query: 207 -----LVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEA 261
+ ++ K G + E VCGG LAGA ++Q L R+ + +G+ +Q++DDIL+
Sbjct: 181 DVSLETLNYIHAHKTGALLEACVVCGGILAGASTADLQRLSRFAQNIGLAFQIIDDILDI 240
Query: 262 KAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVL 314
T EE K GK +Y + +G+E++ A +L A AK +L F G L
Sbjct: 241 ---TATQEELGKTAGKDVQAGKVTYPSLWGIEESRRQASQLVADAKAQLAVF---GSKAL 294
Query: 315 PLYSFIDYAADR 326
PL + D+ R
Sbjct: 295 PLLAIADFITSR 306
>gi|220906408|ref|YP_002481719.1| polyprenyl synthetase [Cyanothece sp. PCC 7425]
gi|219863019|gb|ACL43358.1| Polyprenyl synthetase [Cyanothece sp. PCC 7425]
Length = 320
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 133/330 (40%), Positives = 187/330 (56%), Gaps = 30/330 (9%)
Query: 10 NPPCVCLPRKFPVRCSSLPVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQI 69
NP LP+ S P S FDL +Y +D LE++I+V YPE+I
Sbjct: 6 NPQLETLPQPLTRSGSPTPFSG--------FDLVSYLKERQQWVDAALEQSISVTYPEKI 57
Query: 70 YESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDD 129
Y++MRYS++A G KR P++C+A CE+ G A PTACALEM+H SLIHDDLP MD+
Sbjct: 58 YQAMRYSLMAGG-KRLRPILCLATCEMTGGTVEMAMPTACALEMIHTMSLIHDDLPAMDN 116
Query: 130 DPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVG 189
D RRG+ +NH VYG DIAILAGD L F+++ T VP +L+V+A + AV
Sbjct: 117 DDYRRGKLTNHKVYGEDIAILAGDGLLAYAFEYVAVKTQG--VPAEWLLKVVARLGHAVA 174
Query: 190 STGMAAGQFLDLEGEP------NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRR 243
+TG+ GQ +DLE E + F+ K G + E S +CG +L GA D+ +Q L R
Sbjct: 175 ATGLVGGQVVDLECEGVKDVSVETLNFIHAHKTGALLEASVLCGAYLTGASDEVLQKLSR 234
Query: 244 YGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELR 296
Y R VG+ +Q++DD+L+ T EE K GK +Y + +G+E + A++L
Sbjct: 235 YARNVGLAFQIIDDVLDI---TATQEELGKTAGKDLRAQKVTYPSLWGIEASRCQAKQLV 291
Query: 297 AKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
+AK EL F G+ +PL + D+ R
Sbjct: 292 DEAKAELATF---GERAIPLMAIADFVTAR 318
>gi|350538439|ref|NP_001234087.1| geranylgeranyl pyrophosphate synthase 1 [Solanum lycopersicum]
gi|82547880|gb|ABB82554.1| geranylgeranyl pyrophosphate synthase 1 [Solanum lycopersicum]
Length = 365
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 125/310 (40%), Positives = 188/310 (60%), Gaps = 20/310 (6%)
Query: 30 SAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVM 89
S A + +F+ + Y T ++++ L++AI ++ P +++E+MRYS+LA G KR P++
Sbjct: 63 SKAEKFILPEFEFQEYMVTKAIKVNKALDEAIPMQEPIKVHEAMRYSLLA-GGKRVRPIL 121
Query: 90 CVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAI 149
C+A+CE+ G + A P ACA+EM+H SL+HDDLPCMD+D RRG+P+NH ++G + A+
Sbjct: 122 CMASCEVVGGDESLAIPAACAVEMIHTMSLVHDDLPCMDNDDLRRGKPTNHKIFGENTAV 181
Query: 150 LAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV- 208
LAGDAL L F+H+ + T VP RV++ I E+ AVGS G+ AGQ +DL E V
Sbjct: 182 LAGDALLSLAFEHVATKTQN--VPPQRVVQAIGELGSAVGSEGLVAGQIVDLASEGKQVS 239
Query: 209 ----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQ 264
E++ K ++ E + VCG + G ++ +++ +R Y R +G+L+QVVDDIL+
Sbjct: 240 LTELEYIHHHKTSKLLEAAVVCGAIMGGGNEVDVERMRSYARCIGLLFQVVDDILDV--- 296
Query: 265 TPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLY 317
T +E K GK +Y G+EKA + A EL AKA EL F Y PLY
Sbjct: 297 TKSSDELGKTAGKDLITDKATYPKLMGLEKARQYAGELMAKAMNELSYF-DYA-KAAPLY 354
Query: 318 SFIDYAADRE 327
Y A+R+
Sbjct: 355 HIASYIANRQ 364
>gi|443311531|ref|ZP_21041158.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 7509]
gi|442778410|gb|ELR88676.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 7509]
Length = 308
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 124/304 (40%), Positives = 184/304 (60%), Gaps = 22/304 (7%)
Query: 36 RSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
++ QF+L Y + ++ L++AI+V YPE+IYE+MRYS+LA G KR P++C+A C+
Sbjct: 12 QTAQFNLSAYLLEHQSLVEAALDRAISVVYPEKIYEAMRYSLLAGG-KRLRPILCLATCQ 70
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
+ G A PTACALEM+H SLIHDDLP MD+D RRG+ +NH VYG DIAILAGD L
Sbjct: 71 MAGGTLETAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGL 130
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN------LVE 209
F+ + ++T VP +VL+VIA++ RAVG+ G+ GQ +DLE E +
Sbjct: 131 LAYAFEFVATNTFN--VPAEQVLKVIAKLGRAVGAAGLVGGQVVDLESEGKTDVSLETLN 188
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
F+ K + E S VCGG LAG ++++Q L + + +G+ +Q++DD+L+ T E
Sbjct: 189 FIHNHKTAALLEASVVCGGILAGMSEEDLQRLSGFSQNIGLAFQIIDDVLDI---TSTQE 245
Query: 270 EKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
+ K GK +Y + +G+E+++ A +L A A +L+ F GD PL + Y
Sbjct: 246 QLGKTAGKDLQAQKVTYPSLWGIEESLHQARQLIAAAIAQLEPF---GDKATPLKAIAHY 302
Query: 323 AADR 326
R
Sbjct: 303 ITSR 306
>gi|325516280|gb|ADZ24718.1| geranylgeranyl pyrophosphate synthase 1 [Solanum pennellii]
Length = 365
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 122/301 (40%), Positives = 187/301 (62%), Gaps = 20/301 (6%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
+F+ + Y T ++++ L++AI ++ P +++E+MRYS+LA G KR P++C+A+CE+ G
Sbjct: 72 EFEFQEYMVTKAIKVNKALDEAIPMQEPIKVHEAMRYSLLA-GGKRVRPILCMASCEVVG 130
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
+ A P ACA+EM+H SL+HDDLPCMD+D RRG+P+NH V+G + A+LAGDAL L
Sbjct: 131 GDESLAIPAACAVEMIHTMSLVHDDLPCMDNDDLRRGKPTNHKVFGENTAVLAGDALLSL 190
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQE 213
F+H+ + T ++ P+ RV++ I E+ AVGS G+ AGQ +DL E V E++ +
Sbjct: 191 AFEHVATKT-QNVAPQ-RVVQAIGELGSAVGSEGLVAGQIVDLASEGKQVSLTELEYIHQ 248
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K ++ E + VCG + G ++ +++ +R Y R +G+L+QVVDDIL+ T +E K
Sbjct: 249 HKTAKLLEAAVVCGAIMGGGNEVDVERMRSYARCIGLLFQVVDDILDV---TKSSDELGK 305
Query: 274 KKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK +Y G+EKA + A EL AKA EL F PLY Y A+R
Sbjct: 306 TAGKDLITDKATYPKLMGLEKARQYAGELMAKAMNELSYFDSA--KAAPLYHIASYIANR 363
Query: 327 E 327
+
Sbjct: 364 Q 364
>gi|434403680|ref|YP_007146565.1| geranylgeranyl pyrophosphate synthase [Cylindrospermum stagnale PCC
7417]
gi|428257935|gb|AFZ23885.1| geranylgeranyl pyrophosphate synthase [Cylindrospermum stagnale PCC
7417]
Length = 309
Score = 237 bits (605), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 127/284 (44%), Positives = 175/284 (61%), Gaps = 21/284 (7%)
Query: 57 LEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHA 116
L+++I V YPE+IYESMRYS+LA G KR P++C+AACE+ G A PTACALEM+H
Sbjct: 33 LDQSIPVVYPEKIYESMRYSLLAGG-KRIRPILCLAACEMMGGTIDMAMPTACALEMIHT 91
Query: 117 ASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPR 176
SLIHDDLP MD+D RRG+ +NH VYG +IAILAGD L L F+ + TP + VP R
Sbjct: 92 MSLIHDDLPAMDNDDYRRGKLTNHKVYGENIAILAGDGLLALAFEFPATQTPAN-VPHER 150
Query: 177 VLRVIAEIARAVGSTGMAAGQFLDLEGEPNL------VEFVQEKKFGEMSECSAVCGGFL 230
VL+VIA + +A+G+ G+ GQ +DL+ E L + F+ K + E S VCGG L
Sbjct: 151 VLQVIARLGKALGAAGLVGGQVVDLDSEGKLDISLETLNFIHNHKTAALLEASVVCGGLL 210
Query: 231 AGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFY 283
AGA ++IQ L RY +++G+ +Q++DDIL+ A E+ K GK +Y + +
Sbjct: 211 AGASSEDIQRLTRYAQSIGLAFQIIDDILDITATL---EQLGKTAGKDLTAKKVTYPSLW 267
Query: 284 GVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
G+E++ A +L A EL F G+ LPL + Y R
Sbjct: 268 GIEESRSKATQLVEAACAELAPF---GEKALPLQAIAHYIVSRN 308
>gi|225458370|ref|XP_002283364.1| PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic
[Vitis vinifera]
Length = 371
Score = 237 bits (605), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 125/305 (40%), Positives = 185/305 (60%), Gaps = 21/305 (6%)
Query: 36 RSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
+ T F K Y + + + L++A+ VK P +I+E+MRYS+LA G KR P +C+AACE
Sbjct: 74 KETPFSFKDYMIQKASSVHKALDEAVYVKSPIKIHEAMRYSLLA-GGKRVRPALCLAACE 132
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
L G + A P ACA+EM+H SLIHDDLPCMD+D RRG+P+NH V+G D+A+LAGD+L
Sbjct: 133 LVGGDESNAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDSL 192
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLE--GEPNL----VE 209
F+H+ + T V R++ + E+A+++G+ G+ AGQ +D+ G+ ++ +E
Sbjct: 193 LAFAFEHLATATSG--VSSSRIVAAVGELAKSIGAEGLVAGQVVDISSTGQSDVGLDQLE 250
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
F+ K + E + V G L G D+E++ LR+Y R VG+L+QVVDDIL+ T +
Sbjct: 251 FIHIHKTAALLEAAVVLGALLGGGSDEEVEKLRKYARQVGLLFQVVDDILDV---TKSSQ 307
Query: 270 EKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
E K GK +Y G+EK+ E AE L +AKE+L F + PL + DY
Sbjct: 308 ELGKTAGKDLVTDKATYPKLMGLEKSREFAENLNKEAKEQLSGFDL--EKAAPLIALADY 365
Query: 323 AADRE 327
A R+
Sbjct: 366 IAYRQ 370
>gi|226510660|gb|ACO59905.1| geranylgeranyl pyrophosphate synthase [Elaeagnus umbellata]
Length = 365
Score = 237 bits (605), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 182/301 (60%), Gaps = 21/301 (6%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
F+ K Y ++Q L+ A+ +K PE+I+E+MRYS+LA G KR PV+C+AACEL G
Sbjct: 72 FNFKAYMIEKGHSVNQALDSAVALKEPEKIHEAMRYSLLA-GGKRVRPVLCLAACELVGG 130
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+ A P ACA+EM+H SLIHDDLPCMD+D RRG+P+NH V+G ++A+LAGDAL
Sbjct: 131 HESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEEVAVLAGDALLAFA 190
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQE 213
F+HI T V R++R I E+A+++GS G+ AGQ +D+ EG ++ +EF+
Sbjct: 191 FEHIAVSTVG--VSTARIVRSIGELAKSIGSEGLVAGQVVDICSEGLSDVGLEQLEFIHV 248
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K + E S V G L G D EI+ LR + R +G+L+QVVDDIL+ T +E K
Sbjct: 249 HKTAALLEASVVLGAILGGGSDIEIEKLRMFARYIGLLFQVVDDILDV---TKSSQELGK 305
Query: 274 KKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK VA G+EK+ E A++L A++ L F + PL + +Y A R
Sbjct: 306 TAGKDLVADKVTYPKLMGIEKSREFADKLNKDAQDMLSGFDP--EKAAPLIALANYIAHR 363
Query: 327 E 327
+
Sbjct: 364 Q 364
>gi|428222583|ref|YP_007106753.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7502]
gi|427995923|gb|AFY74618.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7502]
Length = 313
Score = 237 bits (605), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 130/302 (43%), Positives = 181/302 (59%), Gaps = 22/302 (7%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
FDL Y T +++ LE +I VKYPE IYESMRYS++A G KR P++C+A CELFG
Sbjct: 21 FDLCRYLATAKARVEKALEASIKVKYPETIYESMRYSLMASG-KRLRPILCLATCELFGG 79
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+ + PTACA+EMVH SLIHDDLP MD+D RRG+ +NH VYG DIA+LAGDAL
Sbjct: 80 DDSMSMPTACAMEMVHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAVLAGDALLAYA 139
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPN----LVEFVQE 213
F+ I +T VP R+LRV++ + RAV + G+ GQ +DL EG+P+ + F+
Sbjct: 140 FEFIADNTQN--VPSDRILRVVSRLGRAVAAEGLVGGQVVDLESEGKPDTTLETLNFIHR 197
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K + E S V GG LAGAD ++I+ L Y + +G+ +Q++DDIL+ T EE K
Sbjct: 198 HKTAALLEASVVSGGILAGADTEDIKRLTIYAQNIGLAFQIIDDILDI---TSTSEELGK 254
Query: 274 KKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK +Y + G+ ++ A+ L AK ++ + YG +PL DY R
Sbjct: 255 TAGKDIIAQKVTYPSLLGIPESQIQAQNLIDLAKSQV---QCYGSPAIPLMRIADYIIAR 311
Query: 327 EF 328
+
Sbjct: 312 TY 313
>gi|254409375|ref|ZP_05023156.1| polyprenyl synthetase superfamily [Coleofasciculus chthonoplastes
PCC 7420]
gi|196183372|gb|EDX78355.1| polyprenyl synthetase superfamily [Coleofasciculus chthonoplastes
PCC 7420]
Length = 309
Score = 237 bits (605), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 126/297 (42%), Positives = 180/297 (60%), Gaps = 19/297 (6%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
S FDL TY +++ L++++ + YPE+IYE+MRYS+LA G KR P++C+A CEL
Sbjct: 14 SPAFDLSTYLKERKAQVEAALDRSLPLGYPEKIYEAMRYSLLAGG-KRLRPILCLATCEL 72
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
G A PTACALEM+H SLIHDDLP MD+D RRG+ +NH VYG D+AILAGD L
Sbjct: 73 MGGTMEMAMPTACALEMLHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDMAILAGDGLL 132
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE------PNLVEF 210
F+++ + T VP RVL+VIA + R VG+ G+ GQ +DLE E + +
Sbjct: 133 AYAFEYVATQTQG--VPAERVLQVIARLGRTVGAAGLVGGQVVDLESEGKSDIQEETLHY 190
Query: 211 VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEE 270
+ K G + E VCGG LAGA D +I+ L RY + +G+ +Q++DDIL+ T EE
Sbjct: 191 IHTHKTGALLETCVVCGGILAGATDADIERLSRYAQNIGLAFQIIDDILDI---TATQEE 247
Query: 271 KKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
K GK +Y + +G+E + A+EL +A +L+ F + ++ L +FI
Sbjct: 248 LGKTAGKDLQAQKATYPSLWGLEASKAKAQELIEEAIAQLEPFGERSQPLIALANFI 304
>gi|262036860|dbj|BAI47571.1| geranylgeranyl pyrophosphate synthase [Ipomoea sp. Kenyan]
Length = 373
Score = 236 bits (603), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 125/304 (41%), Positives = 185/304 (60%), Gaps = 21/304 (6%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
+ + D Y +++ LE A+ VK P +I+ESMRYS+LA G KR P++C+AACEL
Sbjct: 77 AAKLDFTAYVLGKAKSVNKALEGAVLVKEPLRIHESMRYSLLA-GGKRIRPMLCIAACEL 135
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
G + A P ACA+EM+H SL+HDDLPCMD+D RRG+P+NH VYG D+A+LAGDAL
Sbjct: 136 VGGDEETAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALL 195
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEF 210
F+HI + T +++RV+ E+A+++G+ G+ AGQ +D+ EG N+ +EF
Sbjct: 196 AFAFEHIATATKG--ASSEKIVRVVGELAKSIGAEGLVAGQVVDICSEGISNVGLEHLEF 253
Query: 211 VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEE 270
+ K + E S V G L G ++EI LR++ R +G+L+QVVDDIL+ T +E
Sbjct: 254 IHLHKTAALLEGSVVLGAILGGGTEEEIAKLRKFARNIGLLFQVVDDILDV---TKSSKE 310
Query: 271 KKKKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYA 323
K GK VA G++K+ E AE+L +A+ +L F + + PL + +Y
Sbjct: 311 LGKTAGKDLVADKVTYPKLLGIQKSREFAEQLNNEAQAQLSGFDQ--EKAAPLIALANYI 368
Query: 324 ADRE 327
A R+
Sbjct: 369 AYRD 372
>gi|237783596|gb|ACR19637.1| geranylgeranyl diphosphate synthase [Salvia miltiorrhiza]
Length = 364
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/339 (40%), Positives = 195/339 (57%), Gaps = 36/339 (10%)
Query: 17 PRKFPV------RCSSLPVSA---------ASQLRSTQFDLKTYWTTLITEIDQNLEKAI 61
PR PV R SS VSA ++Q F+ Y +++ L+ A+
Sbjct: 33 PRFEPVFLKSRKRISSHGVSAVLTGEEARVSTQRDDAPFNFNAYVVEKANHVNKALDDAV 92
Query: 62 TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIH 121
V+ P I+++MRYS+LA G KR P++C+AACE+ G + AA P ACA+EM+H SLIH
Sbjct: 93 AVRNPPMIHDAMRYSLLAGG-KRVRPMLCIAACEIVGGPQSAAIPAACAVEMIHTMSLIH 151
Query: 122 DDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVI 181
DDLPCMD+D RRG+P+NH V+G D+A+LAGDAL F+ + + T + PE R+L +
Sbjct: 152 DDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEFMATATTG-VAPE-RILAAV 209
Query: 182 AEIARAVGSTGMAAGQFLDLE--GEPNL----VEFVQEKKFGEMSECSAVCGGFLAGADD 235
E+A+A+G+ G+ AGQ +DL G+ N+ +EF+ K + E S V G L G
Sbjct: 210 GELAKAIGTEGLVAGQVVDLNCTGDANVGLDTLEFIHIHKTAALLEASVVLGAILGGGSS 269
Query: 236 DEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKA 288
D+I+ LR + R +G+L+QVVDDIL+ T EE K GK +Y G++KA
Sbjct: 270 DQIEKLRTFARKIGLLFQVVDDILDV---TKSSEELGKTAGKDLAVDKTTYPKLLGLDKA 326
Query: 289 MEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
ME AE+L +AK +L F PL + DY A R+
Sbjct: 327 MEFAEKLNEEAKAQLAGFDP--SKAAPLTALADYIAHRQ 363
>gi|282901609|ref|ZP_06309527.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505]
gi|281193485|gb|EFA68464.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505]
Length = 309
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 179/302 (59%), Gaps = 21/302 (6%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
+F+L Y D L+K+I + YPE IYE+MRYS+LA G KR P++C+A CE+ G
Sbjct: 15 RFNLYAYLGERQQLCDAALDKSIPLVYPETIYEAMRYSLLAGG-KRVRPILCLATCEMIG 73
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
A PTACA+EM+H SLIHDDLP MD+D RRG+ +NH VYG D+AILAGD L L
Sbjct: 74 GTIEMAMPTACAMEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGDGLLAL 133
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQ 212
FQ + + T P VP R LRVIA + A G+ G+ GQ +DL EG+ N+ + F+
Sbjct: 134 SFQLVATQT-PQTVPPERTLRVIARMGSASGAPGLVGGQVVDLASEGQSNISLETLNFIH 192
Query: 213 EKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKK 272
K + E S VCGG +AGA +IQ L RY + +G+ +Q++DDIL+ T E+
Sbjct: 193 NHKTAALLEASVVCGGIIAGAAPQDIQKLTRYSQNIGLAFQIIDDILDI---TATKEQLG 249
Query: 273 KKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAAD 325
K GK +Y + +G+E++ A+EL +A +LD YGD +PL + +
Sbjct: 250 KTAGKDIESAKVTYPSLWGIEESRLKAQELVEEACAQLDF---YGDKAVPLQEIAHFIIN 306
Query: 326 RE 327
R
Sbjct: 307 RN 308
>gi|407957152|dbj|BAM50392.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
Length = 319
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 135/328 (41%), Positives = 190/328 (57%), Gaps = 23/328 (7%)
Query: 12 PCVCLPRKFPVRCSSLPVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYE 71
P + PR + V S+ A Q R T FDL Y ++ L+ ++ + PE+IYE
Sbjct: 4 PAIAQPR-YLVSSDSM---VAQQTR-TDFDLAQYLQVKKGVVEAALDSSLAIARPEKIYE 58
Query: 72 SMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDP 131
+MRYS+LA G KR P++C+ ACEL G + A PTACALEM+H SLIHDDLP MD+D
Sbjct: 59 AMRYSLLAGG-KRLRPILCITACELCGGDEALALPTACALEMIHTMSLIHDDLPSMDNDD 117
Query: 132 SRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPR-VLRVIAEIARAVGS 190
RRG+P+NH VYG DIAILAGD L F+++V+HTP +P+ +L+VIA + R VG+
Sbjct: 118 FRRGKPTNHKVYGEDIAILAGDGLLAYAFEYVVTHTPQ---ADPQALLQVIARLGRTVGA 174
Query: 191 TGMAAGQFLDLEGE------PNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRY 244
G+ GQ LDLE E P + F+ K G + E S + G LAGA ++ Q L RY
Sbjct: 175 AGLVGGQVLDLESEGRTDITPETLTFIHTHKTGALLEASVLTGAILAGATGEQQQRLARY 234
Query: 245 GRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELD 304
+ +G+ +QVVDDIL+ T EE K GK A ++ E RA+A+ +D
Sbjct: 235 AQNIGLAFQVVDDILDI---TATQEELGKTAGKDVKAQKATYPSLLGLEASRAQAQSLID 291
Query: 305 R----FKKYGDNVLPLYSFIDYAADREF 328
+ + +G + PL + +Y R++
Sbjct: 292 QAIVALEPFGPSAEPLQAIAEYIVARKY 319
>gi|428305626|ref|YP_007142451.1| polyprenyl synthetase [Crinalium epipsammum PCC 9333]
gi|428247161|gb|AFZ12941.1| Polyprenyl synthetase [Crinalium epipsammum PCC 9333]
Length = 312
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 125/294 (42%), Positives = 179/294 (60%), Gaps = 19/294 (6%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
FDL +Y + +++ L+ ++ V YPE+IYE+MRYS+LA G KR P++C+A CE+ G
Sbjct: 20 FDLSSYLAQIQPQVEAALDNSLPVVYPEKIYEAMRYSLLAGG-KRLRPILCLATCEMLGG 78
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A PTACALEMVH SLIHDDLP MD+D RRG+ +NH VYG DIAILAGD L
Sbjct: 79 TTAMAMPTACALEMVHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLAYS 138
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN------LVEFVQE 213
F++I T VP +VL+VIA+++ AVG+TG+ GQ +DLE E + ++
Sbjct: 139 FEYIAKATQG--VPAEQVLQVIAQLSHAVGATGLVGGQVVDLECEGKSDTSVETLTYIHT 196
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K G + E VCG LA A + +Q L RY + +G+ +Q+VDDIL+ T EE K
Sbjct: 197 HKTGALLESCVVCGAILASASAEVLQKLSRYAQNIGLAFQIVDDILDI---TATQEELGK 253
Query: 274 KKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
GK +Y + +G++++ A++L +AK EL F + G ++ + FI
Sbjct: 254 TAGKDLQAQKATYPSIWGLDQSRRQAQKLVDEAKAELASFGEKGRPLMAIADFI 307
>gi|449461425|ref|XP_004148442.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Cucumis sativus]
gi|449514740|ref|XP_004164466.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Cucumis sativus]
Length = 363
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 122/301 (40%), Positives = 179/301 (59%), Gaps = 21/301 (6%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
F+ K Y ++ L+ A+ ++ P +I+E+MRYS++A G KR PV+C+AACEL G
Sbjct: 70 FNFKEYMVQKGASVNHALDAAVFLREPLRIHEAMRYSLMA-GGKRVRPVLCIAACELVGG 128
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
N A P ACA+EM+H SLIHDDLPCMD+D RRG+P+NH V+G D+A+LAGDAL
Sbjct: 129 NESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFA 188
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP------NLVEFVQE 213
F+HI T V PR++R I E+A+++G+ G+ AGQ +D+ E +E++
Sbjct: 189 FEHIAVSTIG--VSPPRIVRAIGELAKSIGAEGLVAGQVVDINSEGAADAGLEQLEYIHL 246
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K + E + V G L G +++++ LR + R +G+L+QVVDDIL+ T E K
Sbjct: 247 HKTAALLEAAVVLGAILGGGSNEDVEKLRNFARYIGLLFQVVDDILDV---TKSSNELGK 303
Query: 274 KKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK VA G+EK+ E A++L A+E+L F D PL + +Y A R
Sbjct: 304 TAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQEQLSGFDP--DKAAPLIALANYIAYR 361
Query: 327 E 327
+
Sbjct: 362 Q 362
>gi|22297564|ref|NP_680811.1| geranylgeranyl pyrophosphate synthase [Thermosynechococcus
elongatus BP-1]
gi|22293741|dbj|BAC07573.1| geranylgeranyl pyrophosphate synthase [Thermosynechococcus
elongatus BP-1]
Length = 307
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 129/300 (43%), Positives = 178/300 (59%), Gaps = 22/300 (7%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
FDLK Y ++ LE +I V YPE+IY++MRYS++A G KR P++C+A CEL G
Sbjct: 15 FDLKAYLKERQALVEAALEASIPVAYPEKIYDAMRYSLMAGG-KRLRPILCLATCELMGG 73
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A PTACALEM+H SLIHDDLP MD+D RRG+P+NH VYG DIAILAGD L
Sbjct: 74 TVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKPTNHKVYGEDIAILAGDGLLAYA 133
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQE 213
F+++V T VP +L+++A + AV +TG+ GQ +DL EG+P++ + F+
Sbjct: 134 FEYVVEQTKN--VPAEYLLKIVARLGHAVAATGLVGGQVVDLECEGQPDIGLETLHFIHS 191
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K G + E S V G L GA + ++ L RY +G+ +Q+VDDIL+ T + K
Sbjct: 192 HKTGALLEASVVSGALLTGAHESDVARLSRYAANIGLAFQIVDDILDI---TSTRDVLGK 248
Query: 274 KKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK +Y +G+EK+ + AE L A+AK EL YG +PL + DY R
Sbjct: 249 TVGKDVAAQKMTYPRLWGLEKSRQEAERLVAEAKAEL---AVYGAAAVPLQAIADYITSR 305
>gi|14422402|dbj|BAB60820.1| putative GGPP synthase [Eucommia ulmoides]
Length = 288
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 124/288 (43%), Positives = 180/288 (62%), Gaps = 21/288 (7%)
Query: 53 IDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALE 112
+++ LE + ++YP +I+ESMRYS+LA G KR P++C+AACEL G A P ACA+E
Sbjct: 8 VNKALEATVLLRYPIKIHESMRYSILAGG-KRVRPLLCIAACELVGGQESTAMPAACAVE 66
Query: 113 MVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLV 172
M+H SL+HDDLPCMD+D RRG+P+NH V+G D+A+LAGD+L F+ I + T V
Sbjct: 67 MIHTMSLMHDDLPCMDNDDLRRGKPTNHMVFGEDVAVLAGDSLLAFAFELIATSTTG--V 124
Query: 173 PEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQEKKFGEMSECSAVC 226
P R++RVI E+A+++GS G+ AGQ +D+ EG ++ +EF+ K + E S V
Sbjct: 125 PADRIVRVIGELAKSIGSEGLVAGQVIDICSEGMTDVGLEHLEFIHVHKTAALLEGSVVL 184
Query: 227 GGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVA----- 281
G L GA D E++ LR++ R +G L+QVVDDIL+ T +E K GK VA
Sbjct: 185 GAILGGATDPEVEKLRKFARCIGFLFQVVDDILDV---TKSSQELGKTAGKDLVADKTTY 241
Query: 282 --FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
G+EK+ E AE+L +A+++L F + PL + +Y A R
Sbjct: 242 PKLIGLEKSREFAEKLNREAQDQLAAFDI--EKAAPLIALANYIAYRN 287
>gi|427418987|ref|ZP_18909170.1| geranylgeranyl pyrophosphate synthase [Leptolyngbya sp. PCC 7375]
gi|425761700|gb|EKV02553.1| geranylgeranyl pyrophosphate synthase [Leptolyngbya sp. PCC 7375]
Length = 302
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 133/300 (44%), Positives = 180/300 (60%), Gaps = 22/300 (7%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
FDL +Y T +++ L++++ V YPE IYESMRYSV+A G KR P++C+A CEL G
Sbjct: 10 FDLNSYLATKGADVEAALDQSLAVVYPEIIYESMRYSVMAGG-KRLRPILCLATCELVGG 68
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A PTACALEMVH SLIHDDLP MD+D RRG+ +NH VYG D+AILAGDAL
Sbjct: 69 TSAQAMPTACALEMVHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDVAILAGDALLAYA 128
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPN----LVEFVQE 213
F+ I T VP VL VI + AVG+ G+ GQ +DL EG+P+ + F+
Sbjct: 129 FEFIADRTED--VPATAVLDVIRRLGHAVGAAGLVGGQIVDLASEGKPDTSIETLNFIHI 186
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K + E S V G LAGAD+D I+ L RY + +G+ +Q+VDD+L+ T EE K
Sbjct: 187 HKTAALLEVSVVSGAVLAGADNDTIERLSRYAQNIGLAFQIVDDVLDV---TSTQEELGK 243
Query: 274 KKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK +Y + +G++++ + A+EL AKEEL+ F G PL + D+ R
Sbjct: 244 SIGKDIQAQKATYPSIWGLDESRKKADELIQAAKEELEPF---GPLKRPLVAIADFITAR 300
>gi|357518399|ref|XP_003629488.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
gi|295322741|gb|ADG01842.1| geranylgeranyl-diphosphate synthase [Medicago truncatula]
gi|355523510|gb|AET03964.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
Length = 372
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 126/313 (40%), Positives = 187/313 (59%), Gaps = 23/313 (7%)
Query: 28 PVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPP 87
P+ A Q + F+ K+Y T +++ L+ A++++ P +++E+MRYS+LA G KR P
Sbjct: 69 PIEAEEQ--NPIFNFKSYMIEKATRVNKALDDAVSLREPLKVHEAMRYSLLA-GGKRVRP 125
Query: 88 VMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDI 147
V+C+AACEL G A P ACA+EM+H SLIHDDLPCMD+D RRG+P+NH V+G D+
Sbjct: 126 VLCLAACELVGGTEPMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDV 185
Query: 148 AILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP-- 205
A+LAGDAL F+HI T V R++R I E+A+++GS G+ AGQ +D+ E
Sbjct: 186 AVLAGDALLAFAFEHIAVSTVD--VSPARIVRAIGELAKSIGSEGLVAGQVVDINSEGLS 243
Query: 206 ----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEA 261
+EF+ K + E + V G L G D++++ LR++ +G+L+QVVDDIL+
Sbjct: 244 DVGLERLEFIHLHKTAALLEGAVVLGAILGGGSDEDVEKLRKFATYIGLLFQVVDDILDV 303
Query: 262 KAQTPRDEEKKKKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVL 314
T +E K GK VA G+EK+ E AE+L A+E+L F +
Sbjct: 304 ---TKSSQELGKTAGKDLVADKVTYPKLLGIEKSKEFAEKLNRDAQEQLSGFDL--NKSA 358
Query: 315 PLYSFIDYAADRE 327
PL + +Y A R+
Sbjct: 359 PLIALANYIAYRQ 371
>gi|148887803|gb|ABR15420.1| geranyl pyrophosphate synthase large subunit [Mentha canadensis]
Length = 377
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 126/304 (41%), Positives = 183/304 (60%), Gaps = 21/304 (6%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
S FD Y +++ LE A+ +K P +I+ESMRYS+LA G KR P++C+AACEL
Sbjct: 81 SPAFDFDGYMLRKAKSVNKALEAAVQMKEPLKIHESMRYSLLA-GGKRVRPMLCIAACEL 139
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
G + A P ACA+EM+H SL+HDDLPCMD+D RRG+P+NH +G +A+LAGDAL
Sbjct: 140 VGGDESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALL 199
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEF 210
F+H+ + T P R++RV+ E+A +VGS G+ AGQ +D+ EG + +EF
Sbjct: 200 SFAFEHVAAATKG--APPERIVRVLGELAVSVGSEGLVAGQVVDVCSEGMAEVGLDHLEF 257
Query: 211 VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEE 270
+ K + + S V G L G +++E+ LR++ +G+L+QVVDDIL+ T +E
Sbjct: 258 IHHHKTAALLQGSVVLGAILGGGNEEEVAKLRKFANCIGLLFQVVDDILDV---TKSSKE 314
Query: 271 KKKKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYA 323
KK GK VA GVEK+ME A+ L +A+E+L F + PL + +Y
Sbjct: 315 LGKKAGKDLVADKTTYPKLIGVEKSMEFADRLNREAQEQLLHFHPH--RAAPLIALANYI 372
Query: 324 ADRE 327
A R+
Sbjct: 373 AYRD 376
>gi|58201026|gb|AAW66658.1| geranyl diphosphate synthase [Picrorhiza kurrooa]
Length = 371
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 139/348 (39%), Positives = 195/348 (56%), Gaps = 30/348 (8%)
Query: 2 IFSSALLANPPCVCLPR-KFPVRCSSLPVSA--------ASQLRSTQFDLKTYWTTLITE 52
I L N P P K + S+ P+SA + + FD K+Y
Sbjct: 31 ILPHPLTNNLPISLFPNPKSNISNSNTPLSAILTKDQKPQNPPTTPTFDFKSYMLQKADS 90
Query: 53 IDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALE 112
+++ L+ +I + P +I ESMRYS+LA G KR P++C+AACEL G + A P ACA+E
Sbjct: 91 VNKALDDSIPLTEPLKIQESMRYSLLAGG-KRIRPMLCIAACELVGGDESTAMPAACAVE 149
Query: 113 MVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLV 172
MVH SL+HDDLPCMD+D RRG+P+NH V+ D+A+LAGDA+ F+H+ S T V
Sbjct: 150 MVHTMSLMHDDLPCMDNDDLRRGKPTNHKVFTEDVAVLAGDAMLAFSFEHVASLTKG--V 207
Query: 173 PEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQEKKFGEMSECSAVC 226
R++RVI E+A+ VG G+ AGQ +D+ EG + +EF+ K + E S V
Sbjct: 208 CSERIVRVIYELAKCVGCEGLVAGQVVDICSEGMDEVGLEHLEFIHLNKTAALLEGSVVL 267
Query: 227 GGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVA----- 281
G L G D+E++ LR + R +G+L+QVVDDIL+ T +E K GK VA
Sbjct: 268 GAILGGGSDEEVEKLRNFARCIGLLFQVVDDILDV---TKSSKELGKTAGKDLVADKTTY 324
Query: 282 --FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
G+EK+ E AE L +AKE L F + + PL + DY A R+
Sbjct: 325 PKLIGIEKSKEFAERLNREAKEHLAGFDQ--NKAAPLIALADYIAYRD 370
>gi|16329282|ref|NP_440010.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|383321022|ref|YP_005381875.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383324192|ref|YP_005385045.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383490076|ref|YP_005407752.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384435342|ref|YP_005650066.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|451813441|ref|YP_007449893.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|1651762|dbj|BAA16690.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|339272374|dbj|BAK48861.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|359270341|dbj|BAL27860.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359273512|dbj|BAL31030.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359276682|dbj|BAL34199.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|451779410|gb|AGF50379.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
Length = 302
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 128/307 (41%), Positives = 181/307 (58%), Gaps = 18/307 (5%)
Query: 33 SQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVA 92
+Q T FDL Y ++ L+ ++ + PE+IYE+MRYS+LA G KR P++C+
Sbjct: 3 AQQTRTDFDLAQYLQVKKGVVEAALDSSLAIARPEKIYEAMRYSLLAGG-KRLRPILCIT 61
Query: 93 ACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAG 152
ACEL G + A PTACALEM+H SLIHDDLP MD+D RRG+P+NH VYG DIAILAG
Sbjct: 62 ACELCGGDEALALPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEDIAILAG 121
Query: 153 DALFPLGFQHIVSHTPPHLVPEPR-VLRVIAEIARAVGSTGMAAGQFLDLEGE------P 205
D L F+++V+HTP +P+ +L+VIA + R VG+ G+ GQ LDLE E P
Sbjct: 122 DGLLAYAFEYVVTHTPQ---ADPQALLQVIARLGRTVGAAGLVGGQVLDLESEGRTDITP 178
Query: 206 NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT 265
+ F+ K G + E S + G LAGA ++ Q L RY + +G+ +QVVDDIL+ T
Sbjct: 179 ETLTFIHTHKTGALLEASVLTGAILAGATGEQQQRLARYAQNIGLAFQVVDDILDI---T 235
Query: 266 PRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDR----FKKYGDNVLPLYSFID 321
EE K GK A ++ E RA+A+ +D+ + +G + PL + +
Sbjct: 236 ATQEELGKTAGKDVKAQKATYPSLLGLEASRAQAQSLIDQAIVALEPFGPSAEPLQAIAE 295
Query: 322 YAADREF 328
Y R++
Sbjct: 296 YIVARKY 302
>gi|225430848|ref|XP_002273789.1| PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic
[Vitis vinifera]
Length = 368
Score = 233 bits (595), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 122/301 (40%), Positives = 185/301 (61%), Gaps = 21/301 (6%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
F+ Y +++ L+ A+ ++ P +++ESMRYS+LA G KR PV+C+AACEL G
Sbjct: 75 FNFNAYILDKANSVNKALDDAVPIREPVKVHESMRYSLLA-GGKRVRPVLCIAACELVGG 133
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+ A P ACA+EM+H SL+HDDLPCMD+D RRG+P+NH V+G ++AILAGDAL
Sbjct: 134 DEATAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGENVAILAGDALLAFA 193
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQE 213
F+H+ + T VP ++R + E+A+++GS G+ AGQ +D+ EG ++ +E++
Sbjct: 194 FEHMATATVG--VPPGWIVRAVGELAKSIGSEGLVAGQVVDICSEGLKDVGLEHLEYIHV 251
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K + E + V G L G ++EI+ LR++ R +G+L+QVVDDIL+ T +E K
Sbjct: 252 HKTAALLEGAVVLGAILGGGSNEEIEKLRKFARCIGLLFQVVDDILDV---TKSSQELGK 308
Query: 274 KKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK VA G+EK+ E+AE+L AK++L F D PL + +Y A R
Sbjct: 309 TAGKDLVADKLTYPKLLGIEKSRELAEQLNKDAKDQLSGFDP--DKAAPLIALSNYIAYR 366
Query: 327 E 327
+
Sbjct: 367 Q 367
>gi|147843373|emb|CAN78430.1| hypothetical protein VITISV_032031 [Vitis vinifera]
Length = 308
Score = 233 bits (595), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 122/301 (40%), Positives = 185/301 (61%), Gaps = 21/301 (6%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
F+ Y +++ L+ A+ ++ P +++ESMRYS+LA G KR PV+C+AACEL G
Sbjct: 15 FNFNAYILDKANSVNKALDDAVPIREPVKVHESMRYSLLA-GGKRVRPVLCIAACELVGG 73
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+ A P ACA+EM+H SL+HDDLPCMD+D RRG+P+NH V+G ++AILAGDAL
Sbjct: 74 DEATAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGENVAILAGDALLAFA 133
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQE 213
F+H+ + T VP ++R + E+A+++GS G+ AGQ +D+ EG ++ +E++
Sbjct: 134 FEHMATATVG--VPPGWIVRAVGELAKSIGSEGLVAGQVVDICSEGLKDVGLEHLEYIHV 191
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K + E + V G L G ++EI+ LR++ R +G+L+QVVDDIL+ T +E K
Sbjct: 192 HKTAALLEGAVVLGAILGGGSNEEIEKLRKFARCIGLLFQVVDDILDV---TKSSQELGK 248
Query: 274 KKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK VA G+EK+ E+AE+L AK++L F D PL + +Y A R
Sbjct: 249 TAGKDLVADKLTYPKLLGIEKSRELAEQLNKDAKDQLSGFDP--DKAAPLIALSNYIAYR 306
Query: 327 E 327
+
Sbjct: 307 Q 307
>gi|119509103|ref|ZP_01628254.1| Polyprenyl synthetase [Nodularia spumigena CCY9414]
gi|119466269|gb|EAW47155.1| Polyprenyl synthetase [Nodularia spumigena CCY9414]
Length = 309
Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 126/301 (41%), Positives = 180/301 (59%), Gaps = 21/301 (6%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
F+L Y + L++AI V YPE+IYESMRYS+LA G KR P++C+AACE+ G
Sbjct: 16 FNLAAYLQKRKKLCETALDQAIPVIYPEKIYESMRYSLLAGG-KRLRPILCLAACEMIGG 74
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A PTACA+EM+H SLIHDDLP MD+D RRG+ +NH VYG DIAILAGD L
Sbjct: 75 TISMAMPTACAMEMIHTMSLIHDDLPAMDNDDYRRGRLTNHKVYGDDIAILAGDGLLAYA 134
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQE 213
F+ + + TP + V RVL+VIA + +A+G+ G+ GQ +DL EG+ ++ + F+
Sbjct: 135 FEFVATQTPEN-VSRERVLQVIARLGKALGAAGLVGGQVVDLDSEGKTDISLETLNFIHN 193
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K + E S VCGG +AGA + +Q L RY + +G+ +Q++DDIL+ T E+ K
Sbjct: 194 HKTAALLEASVVCGGIVAGASSENVQRLSRYSQNIGLAFQIIDDILDI---TATQEQLGK 250
Query: 274 KKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK +Y + +G+E++ A++L A +EL+ F G PL + Y R
Sbjct: 251 TAGKDLIAKKVTYPSLWGIEESRSKAQQLVEAACKELETF---GQLAQPLNALAHYITSR 307
Query: 327 E 327
Sbjct: 308 N 308
>gi|427717935|ref|YP_007065929.1| farnesyl-diphosphate synthase [Calothrix sp. PCC 7507]
gi|427350371|gb|AFY33095.1| farnesyl-diphosphate synthase [Calothrix sp. PCC 7507]
Length = 309
Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 126/303 (41%), Positives = 177/303 (58%), Gaps = 21/303 (6%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
+ F+L Y + L++AI + YPE+IYESMRYS+LA G KR P++C+A CE+
Sbjct: 13 TATFNLSAYLKERQKLCETALDQAIPIIYPEKIYESMRYSLLAGG-KRVRPILCLATCEM 71
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
G A PTACA+EM+H SLIHDDLP MD+D RRG+ +NH VYG D+AILAGD L
Sbjct: 72 TGGTIDMAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGDGLL 131
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN------LVEF 210
F+ + TP VP RVL V+A + RA+G+ G+ GQ +DLE E + F
Sbjct: 132 AFAFEFVAKQTPQD-VPRDRVLDVVARLGRALGAAGLVGGQVVDLESEGKSDTSLETLNF 190
Query: 211 VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEE 270
+ K + E S VCGG L GA +++Q L RY + +G+ +Q+VDDIL+ T E+
Sbjct: 191 IHNHKTAALLEASVVCGGILTGASSEDVQRLTRYAQNIGLAFQIVDDILDI---TATQEQ 247
Query: 271 KKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYA 323
K GK +Y + +G+E++ A+EL +A EL+ F G++ PL + Y
Sbjct: 248 LGKTAGKDLKAQKVTYPSLWGIEESRAKAQELVEEACVELESF---GESAQPLKAIAYYI 304
Query: 324 ADR 326
R
Sbjct: 305 TSR 307
>gi|325516284|gb|ADZ24720.1| geranylgeranyl pyrophosphate synthase 3 [Solanum pennellii]
Length = 360
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 141/331 (42%), Positives = 200/331 (60%), Gaps = 27/331 (8%)
Query: 16 LPRKFPVRCSSLPVSAA------SQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQI 69
L KF SSL VSA S+ + + K Y +++ LE A+++K P I
Sbjct: 37 LKMKFFTNPSSLSVSAVLTKEQESKSKKQAMEFKEYVLEKAISVNKALESAVSIKEPVMI 96
Query: 70 YESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDD 129
+ESMRYS+LA G KR P++C+AACEL G A P ACA+EM+H SLIHDDLPCMD+
Sbjct: 97 HESMRYSLLA-GGKRIRPMLCIAACELVGGVESTAMPAACAVEMIHTMSLIHDDLPCMDN 155
Query: 130 DPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVG 189
D RRG+P+NH +YG D+A+LAGDAL L F+HI +HT V R++RVI E+A+ +G
Sbjct: 156 DDLRRGKPTNHKIYGEDVAVLAGDALLALAFEHIATHTKG--VSSDRIVRVIGELAKCIG 213
Query: 190 STGMAAGQFLDL--EGEPNL----VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRR 243
+ G+ AGQ +D+ EG ++ +EF+ K + E S V G L GA D++++ LR+
Sbjct: 214 AEGLVAGQVVDIISEGISDVDLKHLEFIHLHKTAALLEGSVVLGAILGGAPDEDVEKLRK 273
Query: 244 YGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVA-------FYGVEKAMEVAEELR 296
+ R +G+L+QVVDDIL+ T ++ K GK VA G+EK+ E AEEL
Sbjct: 274 FARCIGLLFQVVDDILDV---TKSSQQLGKTAGKDLVADKVTYPKLIGIEKSREFAEELN 330
Query: 297 AKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+AK +L F + + PL++ +Y A RE
Sbjct: 331 KEAKAQLVGFDQ--EKAAPLFALANYIAYRE 359
>gi|434399896|ref|YP_007133900.1| Farnesyltranstransferase [Stanieria cyanosphaera PCC 7437]
gi|428270993|gb|AFZ36934.1| Farnesyltranstransferase [Stanieria cyanosphaera PCC 7437]
Length = 320
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 124/304 (40%), Positives = 180/304 (59%), Gaps = 23/304 (7%)
Query: 36 RSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
RST FDL +Y ++Q L+ ++ + P +IYE+MRYS+LA G KR P++C+A CE
Sbjct: 25 RST-FDLNSYLKQQKILVEQALDSSLPINQPAKIYEAMRYSLLAGG-KRLRPILCLATCE 82
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
L G + A PTACALEM+H SLIHDDLP MD+D RRG+ +NH VYG DIAILAGD L
Sbjct: 83 LTGGSNEMAIPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGL 142
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE------PNLVE 209
F+++ + T VP R+++VIA + R VG+ G+ GQ LDLE E +
Sbjct: 143 LAYAFEYVATQTKN--VPAERIVKVIARLGRTVGAEGLVGGQVLDLESEGKSDISAETLT 200
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
F+ K G + E S V G L+GA ++++ L +Y + +G+ +Q++DDIL+ T DE
Sbjct: 201 FIHTHKTGALLEASVVSGAILSGASEEDLARLSKYAQNIGLAFQIIDDILDI---TATDE 257
Query: 270 EKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
+ K GK +Y + +G+EK+ AE+L E + + K YG+ PL + +
Sbjct: 258 QLGKTAGKDLQAQKATYPSLWGIEKSQHQAEKL---INEAIAQLKPYGNKAKPLEAIARF 314
Query: 323 AADR 326
R
Sbjct: 315 IVTR 318
>gi|5631295|dbj|BAA82613.1| geranylgeranyl diphosphate synthase (SelGGPS) [Synechococcus
elongatus]
Length = 307
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 128/300 (42%), Positives = 178/300 (59%), Gaps = 22/300 (7%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
FD+K Y ++ LE +I V YPE+IY++MRYS++A G KR P++C+A CEL G
Sbjct: 15 FDVKAYLKERQALVEAALEASIPVAYPEKIYDAMRYSLMAGG-KRLRPILCLATCELMGG 73
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A PTACALEM+H SLIHDDLP MD+D RRG+P+NH VYG DIAILAGD L
Sbjct: 74 TVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKPTNHKVYGEDIAILAGDGLLAYA 133
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQE 213
F+++V T VP +L+++A + AV +TG+ GQ +DL EG+P++ + F+
Sbjct: 134 FEYVVEQTKN--VPAEYLLKIVARLGHAVAATGLVGGQVVDLECEGQPDIGLETLHFIHS 191
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K G + E S V G L GA + ++ L RY +G+ +Q+VDDIL+ T + K
Sbjct: 192 HKTGALLEASVVSGALLTGAHESDVARLSRYAANIGLAFQIVDDILDI---TSTRDVLGK 248
Query: 274 KKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK +Y +G+EK+ + AE L A+AK EL YG +PL + DY R
Sbjct: 249 TVGKDVAAQKMTYPRLWGLEKSRQEAERLVAEAKAEL---AVYGAAAVPLQAIADYITSR 305
>gi|427737891|ref|YP_007057435.1| geranylgeranyl pyrophosphate synthase [Rivularia sp. PCC 7116]
gi|427372932|gb|AFY56888.1| geranylgeranyl pyrophosphate synthase [Rivularia sp. PCC 7116]
Length = 311
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 123/301 (40%), Positives = 183/301 (60%), Gaps = 19/301 (6%)
Query: 33 SQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVA 92
++ + ++FDL Y ++ L+ +I V YPE+IYE+MRYS+LA G KR P++C+A
Sbjct: 12 TESKQSKFDLSVYLKERQKLVETALDNSIAVVYPEKIYEAMRYSLLAGG-KRLRPILCLA 70
Query: 93 ACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAG 152
CE+ G N A PTACALEM+H SLIHDDLP MD+D RRG+ +NH VYG D+AILAG
Sbjct: 71 TCEMTGGNTEIAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDVAILAG 130
Query: 153 DALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN------ 206
D L F+++ ++T VP ++L+VI+ + RAVG+ G+ GQ +DLE E
Sbjct: 131 DGLLAYAFEYVATNTKN--VPPTQILQVISRLGRAVGAAGLVGGQVVDLEMEGKTDVSLE 188
Query: 207 LVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP 266
+ F+ K + E S VCGG L+G ++IQ L+RY + +G+ +Q+VDDIL+ T
Sbjct: 189 TLNFIHNHKTAALLEASVVCGGILSGTSPEDIQKLQRYSQNIGLAFQIVDDILDI---TA 245
Query: 267 RDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSF 319
E+ K GK +Y + +G+E++ + A+ L A EL+ F + ++ L F
Sbjct: 246 TQEQLGKTAGKDLEAQKVTYPSLWGLEESKKQAQLLVEAACAELEPFGEQAKPLVALAYF 305
Query: 320 I 320
I
Sbjct: 306 I 306
>gi|215433848|gb|ACJ66778.1| geranylgeranyl diphosphate synthase [Salvia miltiorrhiza]
Length = 364
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 136/339 (40%), Positives = 194/339 (57%), Gaps = 36/339 (10%)
Query: 17 PRKFPV------RCSSLPVSA---------ASQLRSTQFDLKTYWTTLITEIDQNLEKAI 61
PR PV R SS VSA ++Q F+ Y +++ L+ A+
Sbjct: 33 PRFEPVFLKSRRRISSHGVSAVLTGEEARVSTQRDDAPFNFNAYVVEKANHVNKALDDAV 92
Query: 62 TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIH 121
V+ P I+++MRYS+LA G KR P++C+AACE+ G + AA P ACA+EM+H SLIH
Sbjct: 93 AVRNPPMIHDAMRYSLLAGG-KRVRPMLCIAACEIVGGPQSAAIPAACAVEMIHTMSLIH 151
Query: 122 DDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVI 181
DDLPCMD+D RRG+P+NH V+G D+A+LAGDAL F+ + + T + PE R+L +
Sbjct: 152 DDLPCMDNDDLRRGKPTNHKVFGKDVAVLAGDALLAFAFEFMATATTG-VAPE-RILAAV 209
Query: 182 AEIARAVGSTGMAAGQFLDLE--GEPNL----VEFVQEKKFGEMSECSAVCGGFLAGADD 235
E+A+A+G+ G+ AGQ +DL G+ N+ +EF+ K + E S V G L G
Sbjct: 210 GELAKAIGTEGLVAGQVVDLNCTGDANVGLDTLEFIHIHKTAALLEASVVLGAILGGGSS 269
Query: 236 DEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKA 288
D+I+ LR + R +G+L QVVDDIL+ T EE K GK +Y G++KA
Sbjct: 270 DQIEKLRTFARKIGLLLQVVDDILDV---TKSSEELGKTAGKDLAVDKTTYPKLLGLDKA 326
Query: 289 MEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+E AE+L +AK +L F PL + DY A R+
Sbjct: 327 VEFAEKLNEEAKAQLAGFDP--SKAAPLTALADYIAHRQ 363
>gi|194272413|gb|ACF37217.1| geranylgeranyl diphosphate synthase [Ipomoea batatas]
Length = 363
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 128/329 (38%), Positives = 193/329 (58%), Gaps = 27/329 (8%)
Query: 18 RKFPV--RCSSLPVSAASQL----RSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYE 71
RK PV CS++ + + + D K Y +++ LE A+ +K P +++E
Sbjct: 42 RKKPVFHSCSAILTKEQTDVPRGGSENKLDFKAYVLGKAESVNKALEAAVLLKEPLRVHE 101
Query: 72 SMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDP 131
SMRYS+LA G KR P++C+AACE+ G + A P ACA+EM+H SL+HDDLPCMD+D
Sbjct: 102 SMRYSLLA-GGKRIRPMLCIAACEMVGGDEATAMPAACAVEMIHTMSLMHDDLPCMDNDD 160
Query: 132 SRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGST 191
RRG+P+NH V+G ++A+LAGDAL F+HI + T V +++RVI E+A+ +G+
Sbjct: 161 LRRGKPTNHKVFGENVAVLAGDALLSFAFEHIATATKG--VSSEKIVRVIGELAKCIGAE 218
Query: 192 GMAAGQFLDL--EGEPNL----VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYG 245
G+ AGQ +D+ EG ++ +EF+ K + E S V G L G ++E+ LR++
Sbjct: 219 GLVAGQVVDICSEGISDVGLEHLEFIHLHKTAALLEASVVLGAVLGGGTEEEVAKLRKFA 278
Query: 246 RAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVA-------FYGVEKAMEVAEELRAK 298
R +G+L+QVVDDIL+ T E K GK VA G++K+ E AE+L +
Sbjct: 279 RNIGLLFQVVDDILDV---TKSSHELGKTAGKDLVADKVTYPKLLGLQKSREFAEQLNKE 335
Query: 299 AKEELDRFKKYGDNVLPLYSFIDYAADRE 327
A+ +L F + PL + +Y A RE
Sbjct: 336 AQAQLSGFDQ--GKAAPLIALANYIAYRE 362
>gi|411120370|ref|ZP_11392744.1| geranylgeranyl pyrophosphate synthase [Oscillatoriales
cyanobacterium JSC-12]
gi|410709751|gb|EKQ67264.1| geranylgeranyl pyrophosphate synthase [Oscillatoriales
cyanobacterium JSC-12]
Length = 308
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 128/308 (41%), Positives = 185/308 (60%), Gaps = 23/308 (7%)
Query: 32 ASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCV 91
ASQ R QFDL TY +++ L++++ + YPE+IYE+MRYS++A G KR P++C+
Sbjct: 9 ASQ-REFQFDLATYLAERQAQVEAALDRSLPIIYPEKIYEAMRYSLMAGG-KRLRPILCL 66
Query: 92 AACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILA 151
A CEL G A PTACALEM+H SLIHDDLP MD+D RRG+ +NH V+G D+AILA
Sbjct: 67 ATCELTGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDVAILA 126
Query: 152 GDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN----- 206
GD L F+H+ T + PE R+L+V+A + RAVG+ G+ GQ +DLE E
Sbjct: 127 GDGLLAYAFEHVAIETKG-VAPE-RLLKVVAMLGRAVGAAGLVGGQVVDLECEGKSDVSL 184
Query: 207 -LVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT 265
+ F+ K + E S G L+GA D+++Q L RY + +G+ +Q+VDDIL+ T
Sbjct: 185 ETLNFIHNHKTAALLEASVTSGAVLSGASDEDVQRLLRYAQNIGLAFQIVDDILDI---T 241
Query: 266 PRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYS 318
EE K GK +Y + +G+E++ A++L + AK EL F G+ + L +
Sbjct: 242 ATQEELGKTAGKDLTAQKATYPSIWGLEESRRQADKLISDAKSELGLF---GEKAIALVA 298
Query: 319 FIDYAADR 326
D+ R
Sbjct: 299 IADFITAR 306
>gi|449448558|ref|XP_004142033.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Cucumis sativus]
Length = 375
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 125/301 (41%), Positives = 186/301 (61%), Gaps = 21/301 (6%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
F + Y ++Q L++A++++ P +I+E+MRYS+LA G KR PV+C+AAC+L G
Sbjct: 82 FRFRDYMIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAGG-KRVRPVLCLAACDLVGG 140
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+ AA P AC++EM+H SLIHDDLPCMD+D RRG+P+NH ++G D+A+LAGDAL
Sbjct: 141 SESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVLAGDALLSFA 200
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP------NLVEFVQE 213
F+H+ + T + PE RV+R I E+A+A G+ G+ AGQ +D++ E L+E++
Sbjct: 201 FEHMAA-TKAEVSPE-RVVRAIGELAKATGTGGLVAGQVVDIDSEGADDVGLELLEYIHV 258
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K + E +AV G + G ++EI+ LR + R +G+L+QVVDDIL+ T EE K
Sbjct: 259 HKTAALLEAAAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKST---EELGK 315
Query: 274 KKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK +Y G+EK+ E AE+LR +A E L F PL + +Y A R
Sbjct: 316 TAGKDVAAEKATYPKLMGIEKSKEFAEKLREEAIEALAGFDPV--KAEPLIALSNYIAYR 373
Query: 327 E 327
+
Sbjct: 374 Q 374
>gi|282895575|ref|ZP_06303709.1| Polyprenyl synthetase [Raphidiopsis brookii D9]
gi|281199415|gb|EFA74279.1| Polyprenyl synthetase [Raphidiopsis brookii D9]
Length = 309
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 127/302 (42%), Positives = 179/302 (59%), Gaps = 21/302 (6%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
QF+L Y D L+K+I + YPE+IYE+MRYS+LA G KR P++C+A CE+ G
Sbjct: 15 QFNLYAYLGERQQLCDAALDKSIPLVYPEKIYEAMRYSLLAGG-KRVRPILCLATCEMIG 73
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
A PTACA+EM+H SLIHDDLP MD+D RRG+ +NH VYG D+AILAGD L L
Sbjct: 74 GTIGMAMPTACAMEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGDGLLAL 133
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQ 212
F+ + + T P VP R L+VIA + A G+ G+ GQ +DL EG+ N+ + F+
Sbjct: 134 SFEFVATQT-PQTVPPDRTLQVIARMGSASGAPGLVGGQVVDLASEGQSNISLETLNFIH 192
Query: 213 EKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKK 272
K + E S VCGG +AGA +IQ L Y + +G+ +Q++DDIL+ T E+
Sbjct: 193 NHKTAALLEASVVCGGIIAGASPQDIQKLTCYSQNIGLAFQIIDDILDI---TATKEQLG 249
Query: 273 KKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAAD 325
K GK +Y + +G+E++ A+EL +A +LD YGD +PL + +
Sbjct: 250 KTAGKDIESAKVTYPSLWGIEESRLKAQELVEEACAQLDF---YGDKAVPLQEIAHFIIN 306
Query: 326 RE 327
R
Sbjct: 307 RN 308
>gi|449497746|ref|XP_004160506.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Cucumis sativus]
Length = 340
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 125/301 (41%), Positives = 186/301 (61%), Gaps = 21/301 (6%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
F + Y ++Q L++A++++ P +I+E+MRYS+LA G KR PV+C+AAC+L G
Sbjct: 47 FRFRDYMIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLA-GGKRVRPVLCLAACDLVGG 105
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+ AA P AC++EM+H SLIHDDLPCMD+D RRG+P+NH ++G D+A+LAGDAL
Sbjct: 106 SESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVLAGDALLSFA 165
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP------NLVEFVQE 213
F+H+ + T + PE RV+R I E+A+A G+ G+ AGQ +D++ E L+E++
Sbjct: 166 FEHMAA-TKAEVSPE-RVVRAIGELAKATGTGGLVAGQVVDIDSEGADDVGLELLEYIHV 223
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K + E +AV G + G ++EI+ LR + R +G+L+QVVDDIL+ T EE K
Sbjct: 224 HKTAALLEAAAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKST---EELGK 280
Query: 274 KKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK +Y G+EK+ E AE+LR +A E L F PL + +Y A R
Sbjct: 281 TAGKDVAAEKATYPKLMGIEKSKEFAEKLREEAIEALAGFDPV--KAEPLIALSNYIAYR 338
Query: 327 E 327
+
Sbjct: 339 Q 339
>gi|332706101|ref|ZP_08426173.1| farnesyl-diphosphate synthase [Moorea producens 3L]
gi|332355193|gb|EGJ34661.1| farnesyl-diphosphate synthase [Moorea producens 3L]
Length = 309
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 127/303 (41%), Positives = 180/303 (59%), Gaps = 22/303 (7%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
S DL TY I+ L++A+ P++IYE+MRYS+LA G KR P++C+A CEL
Sbjct: 14 SPSLDLLTYLKERKALIESALDQALPRMEPDKIYEAMRYSLLAGG-KRLRPILCLATCEL 72
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
G A PT+CALEM+H SLIHDDLP MD+D RRG+ +NH V+G DIAILAGD L
Sbjct: 73 MGGTVEMAMPTSCALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLL 132
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE------PNLVEF 210
F++ + T VP P+VL+V+A +A+AVG++G+ GQ LDLE E + F
Sbjct: 133 AYAFEYAAAQTKN--VPAPQVLQVVAWLAKAVGASGLVGGQVLDLESEGKSDIKEETLSF 190
Query: 211 VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEE 270
+ K G + E VCGG LAGA +Q L +Y + +G+ +Q+VDDIL+ T EE
Sbjct: 191 IHTHKTGALLEACVVCGGILAGATAANLQRLSKYAQNIGLAFQIVDDILDI---TATQEE 247
Query: 271 KKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYA 323
K GK +Y + +G+E + A+EL +AK +++ F G+ PL + D+
Sbjct: 248 LGKTAGKDIKAQKATYPSLWGLEASKAKAQELVNEAKAQIESF---GEKAQPLIAIADFI 304
Query: 324 ADR 326
+R
Sbjct: 305 VNR 307
>gi|126030920|pdb|2J1P|A Chain A, Geranylgeranyl Diphosphate Synthase From Sinapis Alba In
Complex With Ggpp
gi|126030921|pdb|2J1P|B Chain B, Geranylgeranyl Diphosphate Synthase From Sinapis Alba In
Complex With Ggpp
Length = 293
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 179/292 (61%), Gaps = 22/292 (7%)
Query: 44 TYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIA 103
+Y +++ L+ A+ ++ P +I+E+ RYS+LA G KR PV+C+AACEL G
Sbjct: 15 SYIIRKADSVNKALDSAVPLREPLKIHEAXRYSLLA-GGKRVRPVLCIAACELVGGEESL 73
Query: 104 AFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHI 163
A P ACA+E +H SLIHDDLPC D+D RRG+P+NH VYG D+A+LAGDAL F+H+
Sbjct: 74 AXPAACAVEXIHTXSLIHDDLPCXDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFAFEHL 133
Query: 164 VSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE----PNL----VEFVQEKK 215
S T + P RV+R + E+A+A+G+ G+ AGQ +D+ E N+ ++F+ K
Sbjct: 134 ASATSSEVSP-ARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNVGLEHLKFIHLHK 192
Query: 216 FGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKK 275
+ E SAV GG + G D+EI+ LR++ R +G+L+QVVDDIL+ K
Sbjct: 193 TAALLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDV----------TKSS 242
Query: 276 GKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+Y G+EK+ E AE+L +A+++L F D V PL + +Y A+R+
Sbjct: 243 KLTYPKLXGLEKSREFAEKLNTEARDQLLGFDS--DKVAPLLALANYIANRQ 292
>gi|374639385|gb|AEZ55681.1| geranyl diphosphate synthase large subunit [Salvia miltiorrhiza]
Length = 344
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 123/301 (40%), Positives = 183/301 (60%), Gaps = 21/301 (6%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
FD K Y +++ LE + +K P +I+ESMRYS+LA G KR P++C+AACEL G
Sbjct: 51 FDFKRYMVEKADSVNKALEAVVQMKEPLKIHESMRYSLLA-GGKRVRPMLCIAACELVGG 109
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A P ACA+EM+H SL+HDDLPCMD+D RRG+P+NH V+G D+A+LAGDAL L
Sbjct: 110 EESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSLA 169
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQE 213
F+H+ T PE R+LR + ++A+++G+ G+ AGQ +D+ EG + +EF+
Sbjct: 170 FEHVAVATRGS-APE-RILRALGQLAKSIGAEGLVAGQVVDICSEGMAEVGLDHLEFIHL 227
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K + + S V G L GA ++E++ LR++ + +G+++QVVDDIL+ T E K
Sbjct: 228 HKTAALLQGSVVMGAILGGAKEEEVERLRKFAKCIGLMFQVVDDILDV---TKSSHELGK 284
Query: 274 KKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK VA GV+K+ E A++L +A+E+L F + PL + +Y A R
Sbjct: 285 TAGKDLVADKTTYPKLLGVQKSKEFADDLNREAQEQLLHFDSH--KAAPLIAIANYIAYR 342
Query: 327 E 327
Sbjct: 343 N 343
>gi|168042697|ref|XP_001773824.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674939|gb|EDQ61441.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 332
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 142/305 (46%), Positives = 184/305 (60%), Gaps = 21/305 (6%)
Query: 36 RSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
+S +FDL +Y ++ L+KA+ ++YPE+I E+MRYS+LA G KR P +C+AACE
Sbjct: 35 KSLEFDLDSYLRAKAKAVNVALDKAVPMQYPEKIREAMRYSLLAGG-KRVRPALCIAACE 93
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
L G N A P+ACA+EMVH SLIHDDLPCMDDD RRG+P+NH +G D A+LAGDAL
Sbjct: 94 LVGGNEDLAMPSACAMEMVHTMSLIHDDLPCMDDDDLRRGKPTNHKAFGEDTAVLAGDAL 153
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN------LVE 209
F+HI T VP RVLRVIA + +AVGS G+ AGQ +D+ E + ++E
Sbjct: 154 LAYAFEHIARATTG--VPADRVLRVIAHLGKAVGSEGLVAGQIVDIASEGDRTVGLEILE 211
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
+V K + E + V G L GA +DEI L Y R VG+L+QVVDDIL+ T
Sbjct: 212 YVHTHKTAVLLESAVVSGAILGGASEDEISRLSNYARNVGLLFQVVDDILDV---TKSSA 268
Query: 270 EKKKKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
E K GK VA G+EK+ AEEL KAK++L F + V PL DY
Sbjct: 269 ELGKTAGKDLVADKATYPKLLGLEKSRAFAEELIRKAKDQLSVFDQ--QKVAPLLGLADY 326
Query: 323 AADRE 327
A R+
Sbjct: 327 IAYRQ 331
>gi|427730885|ref|YP_007077122.1| geranylgeranyl pyrophosphate synthase [Nostoc sp. PCC 7524]
gi|427366804|gb|AFY49525.1| geranylgeranyl pyrophosphate synthase [Nostoc sp. PCC 7524]
Length = 309
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 128/300 (42%), Positives = 177/300 (59%), Gaps = 21/300 (7%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
FDL Y + L+K++ V YPE+IYESMRYS+LA G KR P++C+A CE+ G
Sbjct: 16 FDLGAYLKERKKICEAALDKSMPVVYPEKIYESMRYSLLAGG-KRLRPILCLATCEMMGG 74
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A PTACA+EM+H SLIHDDLP MD+D RRG +NH VYG DIAILAGD L
Sbjct: 75 TIEMAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGMLTNHKVYGEDIAILAGDGLLAYA 134
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQE 213
F+ + + TP + E RVL+VIA + RA+G+ G+ GQ +DL EG+ ++ + F+
Sbjct: 135 FELVATQTPESVTRE-RVLQVIARLGRALGAAGLVGGQVVDLDSEGKSDISLETLNFIHN 193
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K + E VCGG LAGA +++Q L RY + +G+ +Q++DDIL+ T E+ K
Sbjct: 194 HKTAALLEACVVCGGILAGASSEDVQRLSRYAQNIGLAFQIIDDILDV---TATQEQLGK 250
Query: 274 KKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK VA +G+EK+ A+EL A EL+ F G + PL + + R
Sbjct: 251 TAGKDLVAQKVTYPSLWGLEKSRAKAQELIEAACAELEPF---GQSAQPLQALAHFITSR 307
>gi|443328518|ref|ZP_21057114.1| geranylgeranyl pyrophosphate synthase [Xenococcus sp. PCC 7305]
gi|442791817|gb|ELS01308.1| geranylgeranyl pyrophosphate synthase [Xenococcus sp. PCC 7305]
Length = 310
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 127/310 (40%), Positives = 184/310 (59%), Gaps = 23/310 (7%)
Query: 31 AASQL-RSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVM 89
A +QL + T FDL +Y ++ L++++ + PE+IYESMRYS+LA G KR P++
Sbjct: 8 ATAQLEKPTTFDLNSYLKEQKALVETALDQSLAIGIPEKIYESMRYSLLAGG-KRLRPIL 66
Query: 90 CVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAI 149
C+A C L G + A PTACALEM+H SLIHDDLP MD+D RRG+ +NH VYG D+AI
Sbjct: 67 CLATCRLTGGSTEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAI 126
Query: 150 LAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE----- 204
LAGD L F+++ + T ++ PE +++VIA + VG+ G+ GQ LDLE E
Sbjct: 127 LAGDGLLAYAFEYVANKT-DNVAPE-NIIKVIARLGNTVGAEGLVGGQVLDLESEGKTDI 184
Query: 205 -PNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA 263
+ F+ K G + E S V G LAGA +EI L +Y + +G+ +Q++DDIL+
Sbjct: 185 TAETLSFIHTHKTGALLETSVVTGAILAGASAEEIIKLTKYSQNIGLAFQIIDDILDI-- 242
Query: 264 QTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPL 316
T DE+ K GK +Y + +G+EK+ AE+L A+A LD+ YG+ PL
Sbjct: 243 -TATDEQLGKTAGKDLAAQKATYPSLWGLEKSQAEAEKLIAEA---LDQLASYGEAAEPL 298
Query: 317 YSFIDYAADR 326
+ + R
Sbjct: 299 RAIAKFIVTR 308
>gi|300869086|ref|ZP_07113686.1| farnesyl-diphosphate synthase [Oscillatoria sp. PCC 6506]
gi|300332902|emb|CBN58882.1| farnesyl-diphosphate synthase [Oscillatoria sp. PCC 6506]
Length = 308
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 128/302 (42%), Positives = 175/302 (57%), Gaps = 22/302 (7%)
Query: 38 TQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
+ FDL Y ++ L+ A+ V YPE+IYE+MRYS+LA G KR P++C+A CEL
Sbjct: 14 SSFDLSVYLAERAAAVEAALDSAVPVTYPEKIYEAMRYSLLAGG-KRLRPILCLATCELL 72
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G A PTACA EM H SLIHDDLP MD+D RRG+ +NH VYG DIAILAGD L
Sbjct: 73 GGTVEMAMPTACAFEMSHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLA 132
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE------PNLVEFV 211
F+ I + T VP +VL+V+A + RAVG+ + GQ +DLE E + F+
Sbjct: 133 YAFEFIAAQTQN--VPPQQVLQVVARLGRAVGAAELVGGQVVDLESEGVSDVSEETLNFI 190
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
K G + E VCG LAGA+ ++Q L RY + +G+ +Q+VDDIL+ T EE
Sbjct: 191 HTHKTGALLEACVVCGAILAGAEPTDLQRLSRYAQNIGLAFQIVDDILDI---TATQEEL 247
Query: 272 KKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAA 324
K GK +Y + +G+E++ A++L AK EL F G+ PL + D+
Sbjct: 248 GKTAGKDVQAGKVTYPSLWGIEESKRRAKQLVEAAKAELTIF---GEKAEPLLAIADFIT 304
Query: 325 DR 326
+R
Sbjct: 305 NR 306
>gi|218437608|ref|YP_002375937.1| polyprenyl synthetase [Cyanothece sp. PCC 7424]
gi|218170336|gb|ACK69069.1| Polyprenyl synthetase [Cyanothece sp. PCC 7424]
Length = 307
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 125/304 (41%), Positives = 176/304 (57%), Gaps = 22/304 (7%)
Query: 36 RSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
+ T FDL +Y +DQ LE ++ + PE+IYE+MRYS+LA G KR P++C+A C+
Sbjct: 11 QRTSFDLTSYLKHQKDLVDQALESSLPITKPEKIYEAMRYSLLAGG-KRLRPILCLATCD 69
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
L G A PTACALEM+H SLIHDDLP MD+D RRG+ +NH VYG DIAILAGD L
Sbjct: 70 LMGGTVEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGL 129
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE------PNLVE 209
F+++ + T VP ++L VIA + R VG+ G+ GQ LDLE E P +
Sbjct: 130 LSYAFEYVATQTRN--VPPEQILEVIARLGRTVGAAGLVGGQVLDLESEGKSDITPETLT 187
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
F+ K G + E S V G LAGA +E++ L RY + +G+ +Q+VDDIL+ T E
Sbjct: 188 FIHTHKTGALLETSVVSGAILAGATREEVEKLSRYAQNIGLAFQIVDDILDI---TATQE 244
Query: 270 EKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
E K GK +Y + +G+E++ A++L E + + Y + PL + +
Sbjct: 245 ELGKSIGKDVQAQKATYPSLWGIEESKVQAQKL---VDEAIAQLAPYSEKAEPLRAIAQF 301
Query: 323 AADR 326
R
Sbjct: 302 IVTR 305
>gi|440682769|ref|YP_007157564.1| farnesyl-diphosphate synthase [Anabaena cylindrica PCC 7122]
gi|428679888|gb|AFZ58654.1| farnesyl-diphosphate synthase [Anabaena cylindrica PCC 7122]
Length = 309
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 124/302 (41%), Positives = 182/302 (60%), Gaps = 21/302 (6%)
Query: 38 TQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
T+F+L +Y D L++AI V YPE+IYE+MRYS+LA G KR P++C+A E+
Sbjct: 14 TRFNLASYLKERQKLCDTALDQAIPVVYPEKIYEAMRYSLLAGG-KRVRPILCLATSEMI 72
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G A PTACA+EM+H SLIHDDLP MD+D RRG+ +NH VYG DIAILAGD L
Sbjct: 73 GGTIEMAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLA 132
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFV 211
L F+ + + TP + VP R L+VIA + +A+G+ G+ GQ +DL EG+ ++ + F+
Sbjct: 133 LAFEFVATQTPQN-VPRERALQVIARLGKALGAAGLVGGQVVDLDSEGKSDISLETLNFI 191
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
K + E VCGG +AGA ++++ L RY + +G+ +Q++DDIL+ T E+
Sbjct: 192 HNHKTAALLEACVVCGGVIAGASAEDVEKLTRYSQNIGLAFQIIDDILDI---TSTQEQL 248
Query: 272 KKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAA 324
K GK +Y + +G++++ A++L A EL F G+ LPL + Y
Sbjct: 249 GKTAGKDLKAEKVTYPSLWGIDESRAKAQQLVESACVELASF---GEKALPLQAIAHYIV 305
Query: 325 DR 326
R
Sbjct: 306 SR 307
>gi|20386368|gb|AAM21639.1|AF492023_1 geranylgeranyl pyrophosphate synthase [Cistus creticus]
Length = 369
Score = 230 bits (586), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 122/304 (40%), Positives = 181/304 (59%), Gaps = 21/304 (6%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
++ FD ++Y + ++Q LE A++++ P +I+E+MRYS+LA G KR P++C+AACEL
Sbjct: 73 NSGFDFQSYMDQMADSVNQALESAVSLREPLKIHEAMRYSLLAGG-KRVRPLLCIAACEL 131
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
G + A P ACA+EM+H SLIHDDLPCMD+D RRG+P+NH +G DIA+LAGDAL
Sbjct: 132 VGGDVSVAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKAFGEDIAVLAGDALL 191
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP------NLVEF 210
F+H+ T +++R + E+A+AVG G+ AGQ +D+ E + +E+
Sbjct: 192 SFAFEHVAVSTVG--ASPDKIVRAVGELAKAVGKEGLVAGQVVDITSEGLNDVGLDHLEY 249
Query: 211 VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEE 270
+ K + E + V G L G D+E++ LR++ +G+L+QVVDDIL+ T E
Sbjct: 250 IHVHKTAVLLEAAVVLGAILGGGTDEEVERLRKFAICIGLLFQVVDDILDV---TKSSVE 306
Query: 271 KKKKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYA 323
K GK VA G+EK+ E AE+LR A E+L F + PL + Y
Sbjct: 307 LGKTAGKDLVADKVTYPKLMGLEKSREFAEKLRDDAVEQLRVFDQV--KAAPLIALAHYI 364
Query: 324 ADRE 327
A R+
Sbjct: 365 AYRQ 368
>gi|384252734|gb|EIE26210.1| Polyprenyl synthetase [Coccomyxa subellipsoidea C-169]
Length = 289
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 125/290 (43%), Positives = 179/290 (61%), Gaps = 22/290 (7%)
Query: 51 TEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACA 110
T +++ L+K++ ++YPE I ESMRYS+LA G KR P +C+AACE G N A PTACA
Sbjct: 6 TLVNEALDKSVPLQYPEIINESMRYSLLAGG-KRVRPCLCLAACEAVGGNIAQAMPTACA 64
Query: 111 LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPH 170
+EM+H SLIHDDLP MD+D RRG+P+NH VYG D+AILAGDAL L F++I T
Sbjct: 65 MEMLHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEDVAILAGDALLCLAFEYICRET-RG 123
Query: 171 LVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP-------NLVEFVQEKKFGEMSECS 223
+ PE R++RV+ E+ +A G+ G+ AGQ +D++ E ++++ E K + E S
Sbjct: 124 VAPE-RIVRVVCEVGKATGAEGLVAGQIVDIKSEGMAEQVGLETLQYIHEHKTAALLEAS 182
Query: 224 AVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK------ 277
VCG + GA + +++ LR+Y R +G+ +QVVDDIL+ T E K GK
Sbjct: 183 VVCGALVGGAGEPDVERLRKYARCIGLAFQVVDDILDI---TQSSEVLGKTAGKDLLSDK 239
Query: 278 -SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
+Y + G+E++ EVA++L A AKE+L + V PL Y R
Sbjct: 240 TTYPSLLGIERSKEVAQQLIADAKEQLSCYDPA--KVAPLLGLATYIGAR 287
>gi|302770449|ref|XP_002968643.1| hypothetical protein SELMODRAFT_231193 [Selaginella moellendorffii]
gi|300163148|gb|EFJ29759.1| hypothetical protein SELMODRAFT_231193 [Selaginella moellendorffii]
Length = 327
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 124/304 (40%), Positives = 191/304 (62%), Gaps = 22/304 (7%)
Query: 38 TQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
+ FDL++Y ++ L++A+ ++YP++I+E+MRYS+LA G KR P++C+AA E+
Sbjct: 31 SSFDLQSYLQFKGVAVNAALDEALPMRYPDKIHEAMRYSLLAGG-KRVRPILCIAASEMI 89
Query: 98 -GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
G + AA P+A A+EM+H SLIHDDLPCMD+D RRG+P+ H +G D A+LAGDA+
Sbjct: 90 PGGTQEAAMPSAIAMEMIHTMSLIHDDLPCMDNDDLRRGKPTCHKAFGEDTAVLAGDAML 149
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEP----NLVEF 210
L F+HI + VP RV+R+++E+ AVGS G+ AGQ +D+ EG+ +++ +
Sbjct: 150 SLAFEHIARCSAG--VPAERVVRIVSELGSAVGSQGLVAGQIVDIACEGKEGVDLDMLRY 207
Query: 211 VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEE 270
+ K G++ E + VCG GA ++E+ +R Y +AVG+L+QVVDDIL+ T +E
Sbjct: 208 IHIHKTGKLLEAAGVCGAIAGGASEEEVGRVRSYSQAVGLLFQVVDDILDV---TKSSQE 264
Query: 271 KKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYA 323
K GK +Y G++ A + AEEL A+AK++L F + PL + DY
Sbjct: 265 LGKTAGKDLISDKTTYPKLLGLQGARDYAEELLAEAKQQLAAFGE--SRAAPLLALADYI 322
Query: 324 ADRE 327
A R+
Sbjct: 323 AYRQ 326
>gi|443323350|ref|ZP_21052357.1| geranylgeranyl pyrophosphate synthase [Gloeocapsa sp. PCC 73106]
gi|442786914|gb|ELR96640.1| geranylgeranyl pyrophosphate synthase [Gloeocapsa sp. PCC 73106]
Length = 309
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 122/303 (40%), Positives = 181/303 (59%), Gaps = 22/303 (7%)
Query: 38 TQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
++FDLKTY T I+ L++++++ PE+IYE+MRYS+LA G KR P++C+A CEL
Sbjct: 15 SRFDLKTYLDAQKTIIEAALDRSLSISKPEKIYEAMRYSLLAGG-KRLRPILCLATCELM 73
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G + A PTACALEM+H SLIHDDLP MD+D RRG+ +NH VYG DIAILAGD L
Sbjct: 74 GGTSVIALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDIAILAGDGLLA 133
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE------PNLVEFV 211
F+++ + T VP R+++VI ++ AVG+ G+ GQ LDLE E + F+
Sbjct: 134 YAFEYVATQTQG--VPPERLIKVIIHLSHAVGAEGLVGGQVLDLESEGKTDISAETLTFI 191
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
K G + E + G LAGA+ ++++ L +Y + +G+ +Q++DDIL+ A EE
Sbjct: 192 HTHKTGALLEACVLSGADLAGANREDLERLSKYAQNIGLAFQIIDDILDITATV---EEL 248
Query: 272 KKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAA 324
K GK +Y + +G+E + A++L A +L YG+ PL + Y
Sbjct: 249 GKTAGKDLKAQKVTYPSLWGIEASQTQAQQLVEGAIAQL---TVYGEKADPLRAIASYIV 305
Query: 325 DRE 327
R+
Sbjct: 306 TRK 308
>gi|427706110|ref|YP_007048487.1| farnesyl-diphosphate synthase [Nostoc sp. PCC 7107]
gi|427358615|gb|AFY41337.1| farnesyl-diphosphate synthase [Nostoc sp. PCC 7107]
Length = 309
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 124/305 (40%), Positives = 176/305 (57%), Gaps = 21/305 (6%)
Query: 36 RSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
++ F+L Y D L+ + V YPE IYESMRYS+LA G KR P++C+A CE
Sbjct: 12 QTATFNLVAYLKERQKLCDTALDTCMPVIYPETIYESMRYSLLAGG-KRVRPILCLATCE 70
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
+ G A PTACA+EM+H SLIHDDLP MD+D RRG+ +NH VYG DIAILAGD L
Sbjct: 71 MMGGTIEMAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGRLTNHKVYGDDIAILAGDGL 130
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN------LVE 209
F+ + + TP + VP +VL+VIA + RA+G+ G+ GQ +DLE E +
Sbjct: 131 LAFAFELVATQTPEN-VPRDKVLQVIARLGRALGAAGLVGGQVVDLESEGKSDISLETLN 189
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
F+ K + E VCGG LAGA +++Q L RY + +G+ +Q++DDIL+ T E
Sbjct: 190 FIHNHKTAALLEACVVCGGILAGASSEDVQRLTRYSQNIGLAFQIIDDILDV---TATQE 246
Query: 270 EKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
+ K GK +Y + +G+E++ A++L A EL+ YG PL + +
Sbjct: 247 QLGKTAGKDLLAKKVTYPSLWGIEESRAKAQQLIESACAELE---PYGSLAQPLKAVAHF 303
Query: 323 AADRE 327
+R
Sbjct: 304 IVNRN 308
>gi|302816429|ref|XP_002989893.1| hypothetical protein SELMODRAFT_235899 [Selaginella moellendorffii]
gi|300142204|gb|EFJ08906.1| hypothetical protein SELMODRAFT_235899 [Selaginella moellendorffii]
Length = 366
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 135/349 (38%), Positives = 205/349 (58%), Gaps = 33/349 (9%)
Query: 3 FSSALLANPPCVCLPRKF--PVRCSSLPVSAASQLRS--------TQFDLKTYWTTLITE 52
F+ ++A P P KF P R L A+ L+ + FDL++Y
Sbjct: 26 FAKGMVAFPGS-SRPMKFSPPPRWRMLATPASRTLQDVKNSSTGESSFDLQSYLQFKGVA 84
Query: 53 IDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF-GVNRIAAFPTACAL 111
++ L++A+ ++YP++I+E+MRYS+LA G KR P++C+AA E+ G + AA P+A A+
Sbjct: 85 VNAALDEALPMRYPDKIHEAMRYSLLAGG-KRVRPILCIAASEMIPGGTQEAAMPSAIAM 143
Query: 112 EMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHL 171
EM+H SLIHDDLPCMD+D RRG+P+ H +G D A+LAGDA+ L F+HI +
Sbjct: 144 EMIHTMSLIHDDLPCMDNDDLRRGKPTCHKAFGEDTAVLAGDAMLSLAFEHIARCSAG-- 201
Query: 172 VPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQEKKFGEMSECSAV 225
VP RV+R+++E+ AVGS G+ AGQ +D+ EG+ + + ++ K G++ E + V
Sbjct: 202 VPAERVVRIVSELGSAVGSQGLVAGQIVDIACEGKEGVDLDTLRYIHIHKTGKLLEAAGV 261
Query: 226 CGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------S 278
CG GA ++E+ +R Y +AVG+L+QVVDDIL+ T +E K GK +
Sbjct: 262 CGAIAGGASEEEVGRVRSYSQAVGLLFQVVDDILDV---TKSSQELGKTAGKDLISDKTT 318
Query: 279 YVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
Y G++ A + AEEL A AK++L F + PL + DY A R+
Sbjct: 319 YPKLLGLQGARDYAEELLAGAKQQLAAFGE--SRAAPLLALADYIAYRQ 365
>gi|56750769|ref|YP_171470.1| geranylgeranyl pyrophosphate synthase [Synechococcus elongatus PCC
6301]
gi|81299587|ref|YP_399795.1| farnesyl-diphosphate synthase [Synechococcus elongatus PCC 7942]
gi|56685728|dbj|BAD78950.1| geranylgeranyl pyrophosphate synthase [Synechococcus elongatus PCC
6301]
gi|81168468|gb|ABB56808.1| farnesyl-diphosphate synthase [Synechococcus elongatus PCC 7942]
Length = 301
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 138/310 (44%), Positives = 185/310 (59%), Gaps = 25/310 (8%)
Query: 31 AASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMC 90
A+S LR FDLK+Y +++ L + + P IYESMRYS+LA+G KR P++C
Sbjct: 3 ASSSLR---FDLKSYLKERQRQVEAALNAILPPQDPPLIYESMRYSLLAEG-KRLRPILC 58
Query: 91 VAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAIL 150
+A+CEL G A PTACALEMVH SLIHDDLP MD+D RRG+P+NH VYG DIAIL
Sbjct: 59 LASCELAGGTAAIALPTACALEMVHTMSLIHDDLPSMDNDDFRRGRPTNHKVYGEDIAIL 118
Query: 151 AGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP----N 206
AGDAL F+ I HTP VP RVL+VIA +ARAVG+ G+ GQ +DL+ E N
Sbjct: 119 AGDALLTYAFEAIARHTPE--VPADRVLKVIAALARAVGAEGLVGGQVVDLQSEGRDDVN 176
Query: 207 L--VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQ 264
L + ++ K G + E S V G LAGA ++ + LR Y + +G+ +QV+DDIL+ A
Sbjct: 177 LETLHYIHTHKTGALLEVSVVSGAILAGASEELQEQLRTYAQKIGLAFQVIDDILDITAT 236
Query: 265 TPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLY 317
EE K GK +Y + G++ + E A++L +AK + F D PL
Sbjct: 237 A---EELGKTAGKDLAAKKATYPSLLGLDASREYADQLITEAKAAIAAFGAEAD---PLR 290
Query: 318 SFIDYAADRE 327
+ DY R+
Sbjct: 291 AIADYITARK 300
>gi|289526777|pdb|3KRA|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium
gi|289526780|pdb|3KRA|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium
gi|289526781|pdb|3KRC|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ipp
gi|289526784|pdb|3KRC|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ipp
gi|289526785|pdb|3KRF|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (I)
gi|289526788|pdb|3KRF|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (I)
gi|289526789|pdb|3KRO|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (Ii)
gi|289526792|pdb|3KRO|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (Ii)
gi|289526793|pdb|3KRP|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium And Gpp
gi|289526796|pdb|3KRP|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium And Gpp
gi|310942863|pdb|3OAB|A Chain A, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942866|pdb|3OAB|D Chain D, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942867|pdb|3OAC|A Chain A, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942870|pdb|3OAC|D Chain D, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
Length = 295
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 122/301 (40%), Positives = 179/301 (59%), Gaps = 21/301 (6%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
FD Y +++ LE A+ +K P +I+ESMRYS+LA G KR P++C+AACEL G
Sbjct: 2 FDFDGYMLRKAKSVNKALEAAVQMKEPLKIHESMRYSLLA-GGKRVRPMLCIAACELVGG 60
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+ A P ACA+EM+H SL+HDDLPCMD+D RRG+P+NH +G +A+LAGDAL
Sbjct: 61 DESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFA 120
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQE 213
F+H+ + T P R++RV+ E+A ++GS G+ AGQ +D+ EG + +EF+
Sbjct: 121 FEHVAAATKG--APPERIVRVLGELAVSIGSEGLVAGQVVDVCSEGMAEVGLDHLEFIHH 178
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K + + S V G L G ++E+ LR++ +G+L+QVVDDIL+ T +E K
Sbjct: 179 HKTAALLQGSVVLGAILGGGKEEEVAKLRKFANCIGLLFQVVDDILDV---TKSSKELGK 235
Query: 274 KKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK VA GVEK+ E A+ L +A+E+L F + PL + +Y A R
Sbjct: 236 TAGKDLVADKTTYPKLIGVEKSKEFADRLNREAQEQLLHFHPH--RAAPLIALANYIAYR 293
Query: 327 E 327
+
Sbjct: 294 D 294
>gi|6449052|gb|AAF08793.1|AF182828_1 geranyl diphosphate synthase large subunit [Mentha x piperita]
gi|10637876|emb|CAC10561.1| gpp synthase large subunit [Mentha x piperita]
gi|158979013|gb|ABW86879.1| geranyl pyrophosphate synthase large subunit [Mentha x piperita]
Length = 377
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 123/304 (40%), Positives = 180/304 (59%), Gaps = 21/304 (6%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
S FD Y +++ LE A+ +K P +I+ESMRYS+LA G KR P++C+AACEL
Sbjct: 81 SPAFDFDGYMLRKAKSVNKALEAAVQMKEPLKIHESMRYSLLA-GGKRVRPMLCIAACEL 139
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
G + A P ACA+EM+H SL+HDDLPCMD+D RRG+P+NH +G +A+LAGDAL
Sbjct: 140 VGGDESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALL 199
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEF 210
F+H+ + T P R++RV+ E+A ++GS G+ AGQ +D+ EG + +EF
Sbjct: 200 SFAFEHVAAATKG--APPERIVRVLGELAVSIGSEGLVAGQVVDVCSEGMAEVGLDHLEF 257
Query: 211 VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEE 270
+ K + + S V G L G ++E+ LR++ +G+L+QVVDDIL+ T +E
Sbjct: 258 IHHHKTAALLQGSVVLGAILGGGKEEEVAKLRKFANCIGLLFQVVDDILDV---TKSSKE 314
Query: 271 KKKKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYA 323
K GK VA GVEK+ E A+ L +A+E+L F + PL + +Y
Sbjct: 315 LGKTAGKDLVADKTTYPKLIGVEKSKEFADRLNREAQEQLLHFHPH--RAAPLIALANYI 372
Query: 324 ADRE 327
A R+
Sbjct: 373 AYRD 376
>gi|145352919|ref|XP_001420781.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581016|gb|ABO99074.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 312
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 129/314 (41%), Positives = 185/314 (58%), Gaps = 24/314 (7%)
Query: 29 VSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPV 88
VSA + S Q + Y + EI++ L+ ++ + YPE++ ESMRYS+LA G KR P
Sbjct: 7 VSATPDVSSEQ-EFNAYIKNVNAEIERALDASVPMHYPERLSESMRYSLLAGG-KRIRPA 64
Query: 89 MCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIA 148
+C+AACEL G A PTACALEM+H SLIHDDLP MD+D RRG+P+NH VYG ++A
Sbjct: 65 LCLAACELVGGTMEVAMPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMA 124
Query: 149 ILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP--- 205
ILAGDAL F++I T V +VLRVI ++ + VGS G+ GQ +D+ E
Sbjct: 125 ILAGDALLSHAFEYIGRETKG--VSADKVLRVIVDVGKCVGSEGLVGGQVVDIMSEGADE 182
Query: 206 -----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILE 260
+ ++++ K G + E S G L GA +++I L RY + +G+ +QVVDDIL+
Sbjct: 183 GTVTIDTLKYIHAHKTGALLEVSVTAGAILGGASEEQIGKLERYAQNIGLAFQVVDDILD 242
Query: 261 AKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNV 313
A + EE K GK +Y + G+E++ +A +L +KAK+EL+ F V
Sbjct: 243 CTATS---EELGKTAGKDMAVGKSTYPSLVGMEESKRIAADLISKAKQELEGFDPV--KV 297
Query: 314 LPLYSFIDYAADRE 327
PL DY +R+
Sbjct: 298 KPLIGLADYIQNRK 311
>gi|307152571|ref|YP_003887955.1| polyprenyl synthetase [Cyanothece sp. PCC 7822]
gi|306982799|gb|ADN14680.1| Polyprenyl synthetase [Cyanothece sp. PCC 7822]
Length = 307
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 125/302 (41%), Positives = 175/302 (57%), Gaps = 22/302 (7%)
Query: 38 TQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
T FDLK Y +DQ LE ++ + PE+IYE+MRYS+LA G KR P++C+A CEL
Sbjct: 13 TCFDLKAYLKQQKDLVDQALEGSLPITKPEKIYEAMRYSLLAGG-KRLRPILCLATCELM 71
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G A PTACALEM+H SLIHDDLP MD+D RRG+ +NH VYG DIAILAGD L
Sbjct: 72 GGTIEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLS 131
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL------VEFV 211
F+ + + T VP +VL+VIA + R VG+ G+ GQ LDLE E L + F+
Sbjct: 132 YAFEFVATQTRN--VPPNQVLQVIARLGRTVGAAGLVGGQVLDLESEGKLDITAETLTFI 189
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
K G + E S + G LAGA ++ + L RY + +G+ +Q++DDIL+ T EE
Sbjct: 190 HTHKTGALLETSVLSGAILAGATSEDQRRLSRYAQNIGLAFQIIDDILDI---TSTQEEL 246
Query: 272 KKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAA 324
K GK +Y + +G+E++ A++L E + + YG+ P+ + +
Sbjct: 247 GKSIGKDVQAQKATYPSLWGIEESKAQAQKL---VDEAIAQLVLYGEKAEPIRAIAQFIV 303
Query: 325 DR 326
R
Sbjct: 304 SR 305
>gi|170077705|ref|YP_001734343.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7002]
gi|169885374|gb|ACA99087.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7002]
Length = 302
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 125/301 (41%), Positives = 178/301 (59%), Gaps = 23/301 (7%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
F L Y T ++ L++++ + P IYE+MRYS+LA G KR P++C+AACE+ G
Sbjct: 11 FSLAQYLQEQKTIVETALDQSLVITEPVTIYEAMRYSLLAGG-KRLRPILCLAACEMLGG 69
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A TACALEM+H SLIHDDLP MD+D RRG+P+NH VYG DIAILAGDAL
Sbjct: 70 TAAMAMNTACALEMIHTMSLIHDDLPAMDNDDLRRGKPTNHKVYGEDIAILAGDALLSYA 129
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN------LVEFVQE 213
F++ V+ TP VP R+L+VI + +AVG+ G+ GQ +DLE E + F+
Sbjct: 130 FEY-VARTPD--VPAERLLQVIVRLGQAVGAEGLVGGQVVDLESEGKTDVAVETLNFIHT 186
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K G + E G LAGA +E+Q L RY + +G+ +Q+VDDIL+ A EE K
Sbjct: 187 HKTGALLEVCVTAGAILAGAKPEEVQLLSRYAQNIGLAFQIVDDILDITATA---EELGK 243
Query: 274 KKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK +Y + +G+EK+ A++L A+A + + YG+ PL + +Y +R
Sbjct: 244 TAGKDLEAQKVTYPSLWGIEKSQAEAQKLVAEA---IASLEPYGEKANPLKALAEYIVNR 300
Query: 327 E 327
+
Sbjct: 301 K 301
>gi|3885426|gb|AAC77874.1| geranylgeranyl pyrophosphate synthase [Helianthus annuus]
Length = 356
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/281 (41%), Positives = 170/281 (60%), Gaps = 19/281 (6%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
F+ Y + + L+++I +K P I+E+MRYS+LA G KR P++C+AACEL G
Sbjct: 62 FNFNAYMLGKGNSVHKALDESIMIKNPPTIHEAMRYSLLAGG-KRVRPILCIAACELVGG 120
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A P ACA+EM+H SLIHDDLPCMD+D RRG+P+NH VYG D+A+LAGD+L
Sbjct: 121 EEATAMPAACAVEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVYGEDVAVLAGDSLLAFA 180
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP------NLVEFVQE 213
F+++ S T RVL I E+A+++G+ G+ AGQ +D+ + +EF+
Sbjct: 181 FEYVSSRTEG--ASPARVLAAIGELAKSIGTEGLVAGQVVDIASTGGQDIGLDQLEFIHI 238
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K + E S V G L G D +++ LR + R +G+L+QVVDDIL+ T EE K
Sbjct: 239 HKTAALLEASVVLGAILGGGSDAQVEKLRTFARCIGLLFQVVDDILDV---TKSSEELGK 295
Query: 274 KKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFK 307
GK +Y G++K+ + AEEL A+AK++L+ F+
Sbjct: 296 TAGKDLLVDKTTYPKLLGLDKSRQFAEELLAEAKQQLEEFE 336
>gi|350537639|ref|NP_001234302.1| geranylgeranyl pyrophosphate synthase 2 [Solanum lycopersicum]
gi|82547882|gb|ABB82555.1| geranylgeranyl pyrophosphate synthase 2 [Solanum lycopersicum]
Length = 363
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/321 (43%), Positives = 194/321 (60%), Gaps = 26/321 (8%)
Query: 25 SSLPVSAASQ-----LRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLA 79
SSL VSA + + +F+ K Y +++ L++AI VK P +I+E+MRYS+LA
Sbjct: 50 SSLTVSAIATNEKVVMEKEEFNFKVYVAEKAICVNKALDEAIMVKDPPKIHEAMRYSLLA 109
Query: 80 KGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSN 139
G KR P++C+AACEL G N+ A ACA+EM+H SLIHDDLPCMDDD RRG+P+N
Sbjct: 110 -GGKRVRPMLCLAACELVGGNQGNAMAAACAVEMIHTMSLIHDDLPCMDDDDLRRGKPTN 168
Query: 140 HTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFL 199
H VYG D+A+LAGDAL F+++ + T VP R+L +AE+A++VG+ G+ AGQ
Sbjct: 169 HKVYGEDVAVLAGDALLAFAFEYLATATTG--VPPSRILVAVAELAKSVGTEGLVAGQVA 226
Query: 200 DL--EGEPN----LVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQ 253
DL G PN ++EF+ K + E S V G L G D+E+ LRR+ + +G+L+Q
Sbjct: 227 DLACTGNPNVGLEMLEFIHIHKTAALLEASVVIGAILGGGADEEVDKLRRFAQCIGLLFQ 286
Query: 254 VVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRF 306
VVDDIL+ T E K GK +Y G+EKA E A EL +AK++L F
Sbjct: 287 VVDDILDV---TKSSSELGKTAGKDLAVDKTTYPKLLGLEKAKEFAAELNGEAKQQLAAF 343
Query: 307 KKYGDNVLPLYSFIDYAADRE 327
+ PL + DY A+R+
Sbjct: 344 DSH--KAAPLIALADYIANRQ 362
>gi|558925|gb|AAA86688.1| geranylgeranyl pyrophosphate synthase [Lupinus albus]
Length = 316
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/299 (39%), Positives = 176/299 (58%), Gaps = 21/299 (7%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
+F+ Y ++Q L A++++ P +I+E+MRYS+LA G KR PV+C+AACE+ G
Sbjct: 22 RFNFNLYMVEKSRSVNQALNDAVSLREPHKIHEAMRYSLLA-GGKRVRPVLCIAACEVVG 80
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
N A AC++EM+H SLIHDDLPCMD+D RRG+P+NH V+G +IA+LAGDAL
Sbjct: 81 GNESTAMAAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGENIAVLAGDALLAF 140
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP------NLVEFVQ 212
F+HI T V R++ I E+A+++G+ G+ AGQ +D+ E +EF+
Sbjct: 141 AFEHIAVSTSG--VSPERIIGAIGELAKSIGTEGLVAGQVVDINSEGLCDIGLEKLEFIH 198
Query: 213 EKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKK 272
K + E S V G L G ++E++ LR + R +G+++QVVDD+L+ T +E
Sbjct: 199 LHKTAALLEGSVVVGAILGGGCNEEVEKLRMFARYIGLMFQVVDDVLDV---TKSSKELG 255
Query: 273 KKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAA 324
K GK VA G+EK+ E A++L A+E+L F V PL + +Y A
Sbjct: 256 KTAGKDLVADKVTYPKLLGIEKSNEFAQKLNRDAQEQLSGFDPV--KVAPLIALANYIA 312
>gi|308809942|ref|XP_003082280.1| geranylgeranyl diphosphate synthase (ISS) [Ostreococcus tauri]
gi|116060748|emb|CAL57226.1| geranylgeranyl diphosphate synthase (ISS) [Ostreococcus tauri]
Length = 345
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 128/326 (39%), Positives = 188/326 (57%), Gaps = 24/326 (7%)
Query: 18 RKFPVRCSSLPVSAASQLRS-TQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYS 76
R+ S+ S AS + ++ + Y + +I++ L+ ++ V YPE++ ESMRYS
Sbjct: 27 RRARTEASAPATSGASSTSADSEREFNAYIKGVNAKIERALDASVPVHYPERLSESMRYS 86
Query: 77 VLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQ 136
+LA G KR P +C+AACEL G + A PTACALEM+H SLIHDDLP MD+D RRG+
Sbjct: 87 LLAGG-KRIRPALCLAACELVGGDMETAMPTACALEMIHTMSLIHDDLPSMDNDDFRRGK 145
Query: 137 PSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAG 196
P+NH VYG ++AILAGDAL F++I T +VLRVI ++ + VGS G+ G
Sbjct: 146 PTNHKVYGEEMAILAGDALLSHAFEYIGRETKG--ASAEKVLRVIVDVGKCVGSEGLVGG 203
Query: 197 QFLDLEGEP--------NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAV 248
Q +D+ E + ++++ K G + E S G L GA +++I L RY + +
Sbjct: 204 QVVDIMSEGAGPENVTVDTLKYIHAHKTGALLEVSVTAGAILGGASEEQIGKLERYAQNI 263
Query: 249 GVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKE 301
G+ +QVVDDIL+ A + EE K GK +Y + G+E++ +A +L +KAK
Sbjct: 264 GLAFQVVDDILDCTASS---EELGKTAGKDVAVGKTTYPSLVGMEESKRIAADLISKAKA 320
Query: 302 ELDRFKKYGDNVLPLYSFIDYAADRE 327
EL+ F V PL DY +R+
Sbjct: 321 ELEGFDPV--KVRPLIGLADYIQNRK 344
>gi|325516282|gb|ADZ24719.1| geranylgeranyl pyrophosphate synthase 2 [Solanum pennellii]
Length = 363
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 140/321 (43%), Positives = 192/321 (59%), Gaps = 26/321 (8%)
Query: 25 SSLPVSAASQ-----LRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLA 79
SS+ VSA + + +FD K Y +++ L++AI VK P I+E+MRYS+LA
Sbjct: 50 SSVTVSAIATNEKVVMEKEEFDFKVYVAEKAICVNRALDEAIMVKDPPMIHEAMRYSLLA 109
Query: 80 KGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSN 139
G KR P++C AACEL G N+ A ACA+EM+H SLIHDDLPCMDDD RRG+P+N
Sbjct: 110 -GGKRVRPMLCFAACELVGGNQGNAMAAACAVEMIHTMSLIHDDLPCMDDDDLRRGKPTN 168
Query: 140 HTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFL 199
H VYG D+A+LAGDAL F+++ + T VP R+L +AE+A++VG+ G+ AGQ
Sbjct: 169 HKVYGEDVAVLAGDALLAFAFEYLATATIG--VPPSRILVAVAELAKSVGTEGLVAGQVA 226
Query: 200 DL--EGEPN----LVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQ 253
DL G PN ++EF+ K + E S V G L G D+E+ LRR+ R +G+L+Q
Sbjct: 227 DLACTGNPNVGLEMLEFIHIHKTAALLEASVVIGAILGGGADEEVDKLRRFARCIGLLFQ 286
Query: 254 VVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRF 306
VVDDIL+ T E K GK +Y G+EKA E A EL +AK++L F
Sbjct: 287 VVDDILDV---TKSSSELGKTAGKDLAVDKTTYPKLLGLEKAKEFAAELNGEAKQQLAAF 343
Query: 307 KKYGDNVLPLYSFIDYAADRE 327
+ PL + DY A+R+
Sbjct: 344 DSH--KAAPLIALADYIANRQ 362
>gi|428219684|ref|YP_007104149.1| farnesyl-diphosphate synthase [Pseudanabaena sp. PCC 7367]
gi|427991466|gb|AFY71721.1| farnesyl-diphosphate synthase [Pseudanabaena sp. PCC 7367]
Length = 311
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 121/303 (39%), Positives = 172/303 (56%), Gaps = 21/303 (6%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
FD+ Y ++Q L+++I V YPE IYE+MRYS++A G KR P++ +AACEL G
Sbjct: 15 NFDMAAYLAERKVIVEQALDRSIAVTYPETIYEAMRYSLMAGG-KRLRPILTLAACELLG 73
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
+ A PTACA+EM+H SLIHDDLP MD+D RRG+P+NH VYG D+AILAGD L
Sbjct: 74 GSIEVAMPTACAMEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKVYGEDMAILAGDGLLAY 133
Query: 159 GFQHIVSHTP-PHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE------PNLVEFV 211
F++I TP P +VLRVIA + AV +TG+ GQ +DLE E + F+
Sbjct: 134 AFEYIADRTPSPDHTTAKQVLRVIAHLGHAVAATGLVGGQVVDLECEGKTDTTAETLTFI 193
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
K + E CG LAGA ++Q L Y +G+ +Q++DDIL+ A E+
Sbjct: 194 HMHKTAALLEACVSCGAILAGATAIDLQRLSTYANNIGLAFQIIDDILDITATA---EQL 250
Query: 272 KKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAA 324
K GK +Y + +G+ + A+ L +A +LD YG+ +PL + ++
Sbjct: 251 GKTAGKDLAAQKVTYPSLWGIPTSQAKAQALVEEANAQLD---PYGNAAMPLKAIANFIT 307
Query: 325 DRE 327
R
Sbjct: 308 ARN 310
>gi|297830700|ref|XP_002883232.1| hypothetical protein ARALYDRAFT_898426 [Arabidopsis lyrata subsp.
lyrata]
gi|297329072|gb|EFH59491.1| hypothetical protein ARALYDRAFT_898426 [Arabidopsis lyrata subsp.
lyrata]
Length = 356
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 129/308 (41%), Positives = 182/308 (59%), Gaps = 24/308 (7%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVKYPE-QIYESMRYSVLAKGTKRAPPVMCVAACE 95
S + + +Y +++ L++A+ + P +I E+MRY++L+ G KR P++C+AACE
Sbjct: 55 SYESEFMSYMIRKSKSVNEVLDEAVPLCEPVLKIREAMRYTLLSGG-KRVRPMLCLAACE 113
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
L G A P ACA+EM+HA+SLI DDLPCMDDD RRG+P+NH V+G +IAILA DAL
Sbjct: 114 LVGGQESTAMPCACAVEMIHASSLIQDDLPCMDDDNLRRGKPTNHKVFGENIAILAVDAL 173
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP---------N 206
L +H V T + PE RVL I E+ARAVG+ G+ AGQ DL+GE
Sbjct: 174 IALAIKHTVESTSLDVPPE-RVLLAILEMARAVGTEGLVAGQAADLDGEGKSFDNDTGLK 232
Query: 207 LVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP 266
+EF+ K + E +AV G + G D+EI+ +R Y R +G+++QVVDD+L+ T
Sbjct: 233 HLEFIHIHKTAALLEAAAVMGAIMGGGSDEEIERIRSYARCIGLMFQVVDDVLDV---TK 289
Query: 267 RDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSF 319
EE K GK +Y GVEK+ E AE+L +A+E L+ F D PL
Sbjct: 290 SSEELGKTAGKDLISEKLTYPKVMGVEKSREYAEKLNREAREHLNMFDP--DKAAPLLLL 347
Query: 320 IDYAADRE 327
DY +R+
Sbjct: 348 ADYIVNRQ 355
>gi|119489387|ref|ZP_01622167.1| Polyprenyl synthetase [Lyngbya sp. PCC 8106]
gi|119454660|gb|EAW35806.1| Polyprenyl synthetase [Lyngbya sp. PCC 8106]
Length = 287
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 122/282 (43%), Positives = 171/282 (60%), Gaps = 19/282 (6%)
Query: 52 EIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACAL 111
E++Q L+++I V YPE+IYE+MRYS+LA G KR P++C+A CEL G A PTAC+L
Sbjct: 7 EVEQALDRSIAVIYPEKIYEAMRYSLLAGG-KRLRPILCLATCELAGGTMEMAMPTACSL 65
Query: 112 EMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHL 171
EM+H SLIHDDLP MD+D RRGQ +NH VYG DIAILAGD L F+ + + T
Sbjct: 66 EMIHTMSLIHDDLPAMDNDDYRRGQLTNHKVYGEDIAILAGDGLLSYAFEFVATQTTN-- 123
Query: 172 VPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNLVE----FVQEKKFGEMSECSAV 225
VP +VL VI + RAVG+ G+ GQ +D+ EG+ ++ E F+ K G + E V
Sbjct: 124 VPPQQVLDVIGHLGRAVGAAGLVGGQVVDVESEGKTDITEEQLTFIHTHKTGALLEACVV 183
Query: 226 CGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------S 278
G LAG + + L RY + +G+ +Q+VDDIL+ T EE K GK +
Sbjct: 184 SGAILAGTSTENRERLSRYAQKIGLAFQIVDDILDI---TATQEELGKTAGKDLTAQKAT 240
Query: 279 YVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
Y + +G+E++ A +L A+A+ EL F + ++ L FI
Sbjct: 241 YPSLWGLEESKRRANQLIAEAQAELAPFGEAATPLVALAQFI 282
>gi|172035793|ref|YP_001802294.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. ATCC 51142]
gi|354555029|ref|ZP_08974332.1| Farnesyltranstransferase [Cyanothece sp. ATCC 51472]
gi|171697247|gb|ACB50228.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. ATCC 51142]
gi|353553183|gb|EHC22576.1| Farnesyltranstransferase [Cyanothece sp. ATCC 51472]
Length = 309
Score = 224 bits (570), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 122/308 (39%), Positives = 181/308 (58%), Gaps = 22/308 (7%)
Query: 33 SQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVA 92
+Q ++ FDL +Y ++ L++++ + PE+IYE+MRYS+LA G KR P++C+
Sbjct: 10 TQTETSDFDLASYLKEKKQLVEAALDQSLPITRPEKIYEAMRYSLLAGG-KRLRPILCLT 68
Query: 93 ACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAG 152
CEL G R + PTACALEM+H SLIHDDLP MD+D RRG+ +NH VYG DIAILAG
Sbjct: 69 TCELMGGTREMSLPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAG 128
Query: 153 DALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP------N 206
DAL F+++ + T V ++ VIA + R VG+ G+ GQ LDLE E +
Sbjct: 129 DALLSYAFEYVATQTRN--VDLANLMDVIARLGRTVGAAGLVGGQVLDLESEGRADVTVD 186
Query: 207 LVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP 266
++F+ K G + E S V G LAGA ++I+ L RY + +G+ +Q++DDIL+ A T
Sbjct: 187 TLKFIHIHKTGALLETSVVSGAILAGAKPEDIERLSRYAQNIGLAFQIIDDILDVTAST- 245
Query: 267 RDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSF 319
EE K GK +Y + +G+E++ + A+ L A +L YG + PL +
Sbjct: 246 --EELGKTAGKDQRDQKATYPSLWGLEESQKQAQALIDDAIAQL---SPYGQSAQPLTAI 300
Query: 320 IDYAADRE 327
+ R+
Sbjct: 301 AQFIVARK 308
>gi|425446281|ref|ZP_18826289.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9443]
gi|389733543|emb|CCI02694.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9443]
Length = 309
Score = 224 bits (570), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 120/305 (39%), Positives = 183/305 (60%), Gaps = 22/305 (7%)
Query: 36 RSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
++ +F L +Y ++ L+ ++ + P +IYE+MRYS+LA G KR P++C+A CE
Sbjct: 13 KNERFSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGG-KRLRPILCLATCE 71
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
L G + A PTACALEM+H SLIHDDLP MD+D RRG+ +NH V+G DIAILAGD L
Sbjct: 72 LMGGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGL 131
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VE 209
F+++ + T H VP ++L VIA + R VG+ G+ GQ LDL EG+P++ +
Sbjct: 132 LAYAFEYVATQT--HNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLG 189
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
F+ +K G + E S V G LAGA ++I L RY + +G+ +Q++DD+L+ T E
Sbjct: 190 FIHTQKTGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDI---TATKE 246
Query: 270 EKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
E K GK +Y + +G+E + + A++L A EL + + + PL + +Y
Sbjct: 247 ELGKTAGKDLQAQKATYPSLWGIEGSRQQAQQLIDSAINELSGYDEAAE---PLRAIAEY 303
Query: 323 AADRE 327
+R+
Sbjct: 304 IVNRK 308
>gi|255080134|ref|XP_002503647.1| geranyl pyrophosphate synthase [Micromonas sp. RCC299]
gi|226518914|gb|ACO64905.1| geranyl pyrophosphate synthase [Micromonas sp. RCC299]
Length = 349
Score = 224 bits (570), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 122/303 (40%), Positives = 177/303 (58%), Gaps = 22/303 (7%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
D Y I+Q L ++ YPE+++ESMRYS+LA G KR P +C+AACEL G
Sbjct: 53 LDFAAYIAEKNAAIEQALSDSVPEMYPERLHESMRYSLLA-GGKRIRPCLCIAACELMGG 111
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A PTACALEM+H SLIHDDLP MD+D RRG+P+NH VYG ++AILAGDAL
Sbjct: 112 TMDVAMPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDALLSHA 171
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP--------NLVEFV 211
F++I TP VP R LRVI ++ + VGS G+ GQ +D+ E ++++
Sbjct: 172 FEYIGRETPKS-VPAERTLRVIVDVGKCVGSEGLVGGQVVDIMSEGAEAGEVTVETLQYI 230
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
K G + E S G LAGA +++++ L +Y + +G+ +QVVDDIL+ T E+
Sbjct: 231 HAHKTGALLEVSVTAGAILAGAKEEDVERLGKYAQLIGLAFQVVDDILDC---TQTSEQL 287
Query: 272 KKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAA 324
K GK +Y + G+E++ ++A++L A AK+ L + + + PL DY
Sbjct: 288 GKTAGKDEAVGKATYPSLVGLEESKKIADKLIADAKDLLKDYDQ--EKAAPLIGLADYIK 345
Query: 325 DRE 327
+R+
Sbjct: 346 NRQ 348
>gi|284928678|ref|YP_003421200.1| farnesyl-diphosphate synthase [cyanobacterium UCYN-A]
gi|284809137|gb|ADB94842.1| farnesyl-diphosphate synthase [cyanobacterium UCYN-A]
Length = 309
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 120/305 (39%), Positives = 183/305 (60%), Gaps = 16/305 (5%)
Query: 33 SQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVA 92
+Q+ ++ FDL +Y ++ L+ +I + PE+IYE+MRYS+LA G KR P++C+
Sbjct: 10 TQIETSCFDLVSYLKEKKQLVEAALDASIPITCPEKIYEAMRYSLLAGG-KRLRPILCLT 68
Query: 93 ACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAG 152
CEL G A PTACALEM+H SLIHDDLP MD+D RRGQ +NH VYG DIAILAG
Sbjct: 69 TCELMGGTVEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGQLTNHKVYGEDIAILAG 128
Query: 153 DALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE------PN 206
DAL F+H+ + T H V ++ VIA + R VG+ G+ GQ LDLE E +
Sbjct: 129 DALLSYAFEHVATQT--HNVSLTNLVDVIARLGRTVGAAGLVGGQVLDLESEGKSNITSD 186
Query: 207 LVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILE---AKA 263
+++F+ K G + E S V G LAGA+ ++I+ L Y + +G+ +Q++DDIL+ +A
Sbjct: 187 ILKFIHVHKTGALLETSVVSGAILAGANLEDIERLSHYAQNIGLAFQIIDDILDITSTQA 246
Query: 264 QTPRDEEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
+ + K K+ K +Y + +G+E++ + A+ L ++ + + YG PL + +
Sbjct: 247 ELGKTAGKDKQAQKATYPSLWGLEESQKQAQIL---IEDAIAQLAPYGREAYPLEAIARF 303
Query: 323 AADRE 327
R+
Sbjct: 304 IVSRK 308
>gi|255568243|ref|XP_002525096.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223535555|gb|EEF37223.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
Length = 369
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 130/305 (42%), Positives = 187/305 (61%), Gaps = 21/305 (6%)
Query: 36 RSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
R FD K+Y I+Q L+ A+ ++ P +I+ESMRYS+LA G KR P +C+AACE
Sbjct: 72 RPPTFDFKSYMLQKAASINQALDAAVPIREPTKIHESMRYSLLA-GGKRVRPALCLAACE 130
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
L G N A P ACA+EM+H SLIHDDLPCMD+D RRG+P+NH V+G D+A+LAGDAL
Sbjct: 131 LVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAGDAL 190
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VE 209
L F+HI T V R++R + E+A+A+G+ G+ AGQ +D+ EG + +E
Sbjct: 191 LALAFEHIAIATLN--VSPARIVRAVGELAKAIGAEGLVAGQVVDICSEGLSEVGLEKLE 248
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
F+ K ++ E + V G + G D+E++ LR+Y R +G+L+QVVDDIL+ T +
Sbjct: 249 FIHVHKTAKLLEGAVVLGAIMGGGTDEEVEKLRKYARDIGLLFQVVDDILDV---TKSSQ 305
Query: 270 EKKKKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
E K GK VA G++K+ E AE+L +A+E+L F + PL + +Y
Sbjct: 306 ELGKTAGKDLVADKVTYPKLMGIDKSREFAEKLNKEAQEQLAGFDP--EKAAPLIALANY 363
Query: 323 AADRE 327
A R+
Sbjct: 364 IAYRQ 368
>gi|75908916|ref|YP_323212.1| farnesyl-diphosphate synthase [Anabaena variabilis ATCC 29413]
gi|75702641|gb|ABA22317.1| farnesyl-diphosphate synthase [Anabaena variabilis ATCC 29413]
Length = 309
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 124/302 (41%), Positives = 178/302 (58%), Gaps = 21/302 (6%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
+F+L Y + L++AI V YPE+IYESMRYS+LA G KR P++C+A E+ G
Sbjct: 15 KFNLVAYLKERQKLCEAALDEAIPVIYPEKIYESMRYSLLAGG-KRLRPILCLATSEMMG 73
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
A PTACA+EM+H SLIHDDLP MD+D RRG +NH VYG DIAILAGD L
Sbjct: 74 GTIEIAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGMLTNHKVYGDDIAILAGDGLLAY 133
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQ 212
F+ + TP VP RVL+V+A + RA+G+ G+ GQ +DL EG+ ++ + F+
Sbjct: 134 AFEFVAIRTPES-VPRDRVLQVVARLGRALGAAGLVGGQVVDLDSEGKSDISLETLNFIH 192
Query: 213 EKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKK 272
K + E VCGG LAGA +++Q L RY + +G+ +Q++DDIL+ T E+
Sbjct: 193 NHKTAALLEACVVCGGILAGASSEDVQRLSRYSQNIGLAFQIIDDILDI---TSTQEQLG 249
Query: 273 KKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAAD 325
K GK +Y + +G+E++ A++L A EL+ F G++ PL + +
Sbjct: 250 KTAGKDLLAKKVTYPSLWGIEQSRVKAQQLIEAACAELEPF---GEDAQPLKAIAHFITS 306
Query: 326 RE 327
R
Sbjct: 307 RN 308
>gi|17227709|ref|NP_484257.1| geranylgeranyl diphosphate synthase [Nostoc sp. PCC 7120]
gi|17135191|dbj|BAB77737.1| geranylgeranyl diphosphate synthase [Nostoc sp. PCC 7120]
Length = 309
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 126/314 (40%), Positives = 177/314 (56%), Gaps = 25/314 (7%)
Query: 31 AASQLRS----TQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAP 86
AA LR +F+L Y + L+ AI + YPE+IYESMRYS+LA G KR
Sbjct: 3 AADNLRKMSEEAKFNLVAYLKERQKLCEAALDAAIPIIYPEKIYESMRYSLLAGG-KRLR 61
Query: 87 PVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVD 146
P++C+A E+ G A PTACA+EM+H SLIHDDLP MD+D RRG +NH VYG D
Sbjct: 62 PILCLATSEMMGGTIEIAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGMLTNHKVYGED 121
Query: 147 IAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN 206
IAILAGD L F+ + TP VP RVL+V+A + RA+G+ G+ GQ +DL+ E
Sbjct: 122 IAILAGDGLLAYAFEFVAIRTPES-VPRDRVLQVVARLGRALGAAGLVGGQVVDLDSEGK 180
Query: 207 ------LVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILE 260
+ F+ K + E VCGG LAGA + +Q L RY + +G+ +Q++DDIL+
Sbjct: 181 SDTSLETLNFIHNHKTAALLEACVVCGGILAGASSENVQRLSRYSQNIGLAFQIIDDILD 240
Query: 261 AKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNV 313
T E+ K GK +Y + +G+E++ A++L A EL+ F G++
Sbjct: 241 I---TSTQEQLGKTAGKDLLAKKVTYPSLWGIEQSRVKAQQLIEAACTELEPF---GEDA 294
Query: 314 LPLYSFIDYAADRE 327
PL + + R
Sbjct: 295 QPLKAIAHFITSRN 308
>gi|425469791|ref|ZP_18848698.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9701]
gi|389880334|emb|CCI38905.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9701]
Length = 326
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/305 (39%), Positives = 182/305 (59%), Gaps = 22/305 (7%)
Query: 36 RSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
++ F L +Y ++ L+ ++ + P +IYE+MRYS+LA G KR P++C+A CE
Sbjct: 30 KNENFSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGG-KRLRPILCLATCE 88
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
L G + A PTACALEM+H SLIHDDLP MD+D RRG+ +NH V+G DIAILAGD L
Sbjct: 89 LMGGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGL 148
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VE 209
F+++V+ T VP +VL VIA + R VG+ G+ GQ LDL EG+P++ +
Sbjct: 149 LAYAFEYVVTQTRN--VPPVQVLEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLG 206
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
F+ +K G + E S V G LAGA ++I L RY + +G+ +Q++DD+L+ T E
Sbjct: 207 FIHTQKTGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDI---TATKE 263
Query: 270 EKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
E K GK +Y + +G+E + + A++L A EL + + + PL + +Y
Sbjct: 264 ELGKTAGKDLQAQKATYPSLWGIEGSRQQAQQLIDSAINELSGYDEAAE---PLRAIAEY 320
Query: 323 AADRE 327
+R+
Sbjct: 321 IVNRK 325
>gi|422305087|ref|ZP_16392424.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9806]
gi|389789644|emb|CCI14373.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9806]
Length = 309
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 120/305 (39%), Positives = 181/305 (59%), Gaps = 22/305 (7%)
Query: 36 RSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
++ F L +Y ++ L+ ++ + P +IYE+MRYS+LA G KR P++C+A CE
Sbjct: 13 KNESFSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGG-KRLRPILCLATCE 71
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
L G + A PTACALEM+H SLIHDDLP MD+D RRG+ +NH V+G DIAILAGD L
Sbjct: 72 LMGGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGL 131
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VE 209
F+++ + T H VP ++L VIA + R VG+ G+ GQ LDL EG+P++ +
Sbjct: 132 LAYAFEYVATQT--HNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLG 189
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
F+ +K G + E S V G LAGA ++I L RY + +G+ +Q++DD+L+ T E
Sbjct: 190 FIHTQKTGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDI---TATKE 246
Query: 270 EKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
E K GK +Y + +G+E + + A+ L A EL + + + PL + +Y
Sbjct: 247 ELGKTAGKDLQAQKATYPSLWGIEGSRQQAQHLIDSAIGELSSYDEAAE---PLRAIAEY 303
Query: 323 AADRE 327
+R+
Sbjct: 304 IVNRK 308
>gi|359458569|ref|ZP_09247132.1| geranylgeranyl diphosphate synthase [Acaryochloris sp. CCMEE 5410]
Length = 316
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 120/303 (39%), Positives = 178/303 (58%), Gaps = 22/303 (7%)
Query: 38 TQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
+ F+L Y + ++ L+ +I V YPE+IYE+MRYS++A G KR P++C+AACEL
Sbjct: 22 SNFNLVDYLSQRRELVEAALDASIPVVYPEKIYEAMRYSLMAGG-KRLRPILCLAACELA 80
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G A PTACALEM+H SLIHDDLP MD+D RRG+P+NH YG DIAILAGD L
Sbjct: 81 GGTIEMAMPTACALEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKKYGEDIAILAGDGLLA 140
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP------NLVEFV 211
++H+ T VP +VL+V+A + AV +TG+ GQ +DLE E + + F+
Sbjct: 141 YAYEHVAIQT--QQVPPEQVLKVVARLGHAVAATGLVGGQVVDLESEGAEDVTLSTLNFI 198
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
K G + E S + G LAGA+ D + ++ R +G+ +Q++DD+L+ A + E+
Sbjct: 199 HAHKTGALLEASVLSGAELAGANQDLLDRCSKFARNIGLAFQIIDDVLDVTATS---EKL 255
Query: 272 KKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAA 324
K GK +Y + +G+ ++ A+ L +AK EL YG+ PL + D+
Sbjct: 256 GKTAGKDVAAQKATYPSLWGIPESKRQAQHLIEEAKAEL---AVYGEQSAPLQALADFIT 312
Query: 325 DRE 327
R+
Sbjct: 313 SRQ 315
>gi|194477224|ref|YP_002049403.1| geranylgeranyl pyrophosphate synthase [Paulinella chromatophora]
gi|171192231|gb|ACB43193.1| geranylgeranyl pyrophosphate synthase [Paulinella chromatophora]
Length = 300
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/302 (40%), Positives = 178/302 (58%), Gaps = 21/302 (6%)
Query: 38 TQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
T+FD Y ++ L+ ++ + P + E+MRYS+LA G KR P++C+AACEL
Sbjct: 7 TEFDFAAYLRAARESVELALDGSLGTERPTSLSEAMRYSLLAGG-KRLRPILCLAACELA 65
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G N AA PTA ALEM+H SLIHDDLP MD+D RRG+P+NH VYG AILAGDAL
Sbjct: 66 GGNVAAAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGEATAILAGDALLT 125
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP-----NLVEFVQ 212
F+ IV+ P + PE +L+VI E++ A G+ G+ GQ +DLE E + +E++
Sbjct: 126 RAFE-IVALRSPGVSPEC-ILKVIGELSLAAGAPGLVGGQMVDLESEGKEVNLDTLEYIH 183
Query: 213 EKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKK 272
K G + +CGG + A D+ +Q+LR Y R +G+ +Q++DDIL+ A + +
Sbjct: 184 LHKTGALLSACVICGGLIGDASDELLQALRNYARGIGLAFQIIDDILDVTASS---DVLG 240
Query: 273 KKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAAD 325
K GK VA G++ + E AE+L A+AK+ LD ++ D PL + DY
Sbjct: 241 KTAGKDLVADKTTYPKLLGLKASRERAEQLVAEAKQGLDPWR---DRAAPLLALADYITG 297
Query: 326 RE 327
R+
Sbjct: 298 RD 299
>gi|158337967|ref|YP_001519143.1| geranylgeranyl diphosphate synthase [Acaryochloris marina
MBIC11017]
gi|158308208|gb|ABW29825.1| geranylgeranyl diphosphate synthase [Acaryochloris marina
MBIC11017]
Length = 301
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 121/303 (39%), Positives = 177/303 (58%), Gaps = 22/303 (7%)
Query: 38 TQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
+ F+L Y + ++ L+ +I V YPE+IYE+MRYS+LA G KR P++C+AACEL
Sbjct: 7 SNFNLVDYLSQRRELVEAALDASIPVVYPEKIYEAMRYSLLAGG-KRLRPILCLAACELA 65
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G A PTACALEM+H SLIHDDLP MD+D RRG+P+NH YG DIAILAGD L
Sbjct: 66 GGTIEMAMPTACALEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKKYGEDIAILAGDGLLA 125
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP------NLVEFV 211
++H+ T VP +VL+V+A + AV +TG+ GQ +DLE E + + F+
Sbjct: 126 YAYEHVAIET--QQVPPEQVLKVVARLGHAVAATGLVGGQVVDLESEGAEDVTLSTLNFI 183
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
K G + E S + G LAGA D + ++ R +G+ +Q++DD+L+ A + E+
Sbjct: 184 HAHKTGALLEASVLSGAELAGASQDLLNRCSKFARNIGLAFQIIDDVLDVTATS---EKL 240
Query: 272 KKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAA 324
K GK +Y + +G+ ++ A+ L +AK EL YG+ PL + D+
Sbjct: 241 GKTAGKDVAAQKATYPSLWGIPESKRQAQHLIEEAKAEL---AVYGEQSAPLQALADFIT 297
Query: 325 DRE 327
R+
Sbjct: 298 SRQ 300
>gi|425457244|ref|ZP_18836950.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9807]
gi|389801481|emb|CCI19370.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9807]
Length = 309
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 182/305 (59%), Gaps = 22/305 (7%)
Query: 36 RSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
++ +F L +Y ++ L+ ++ + P +IYE+MRYS+LA G KR P++C+A CE
Sbjct: 13 KNERFSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGG-KRLRPILCLATCE 71
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
L G + A PTACALEM+H SLIHDDLP MD+D RRG+ +NH V+G DIAILAGD L
Sbjct: 72 LMGGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGL 131
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VE 209
F+++ + T VP ++L VIA + R VG+ G+ GQ LDL EG+P++ +
Sbjct: 132 LAYAFEYVATQTLN--VPPVQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLS 189
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
F+ +K G + E S V G LAGA ++I L RY + +G+ +Q++DD+L+ T E
Sbjct: 190 FIHTQKTGALLETSVVSGAVLAGAKAEDIAKLARYAQNIGLAFQIIDDVLDI---TATKE 246
Query: 270 EKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
E K GK +Y + +G+E + + A++L A EL + + + PL + +Y
Sbjct: 247 ELGKTAGKDLQAQKATYPSLWGIEGSRQQAQQLIDSAINELSGYDEAAE---PLRAIAEY 303
Query: 323 AADRE 327
+R+
Sbjct: 304 IVNRK 308
>gi|405789932|gb|AFS28709.1| putative geranylgeranyl pyrophosphate synthase, partial [Olea
europaea]
Length = 251
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 113/257 (43%), Positives = 164/257 (63%), Gaps = 19/257 (7%)
Query: 60 AITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASL 119
A+ ++ P +I+ESMRYS+LA G KR P++C+AACEL G A P+ACA+EM+H SL
Sbjct: 1 AVLLQEPLKIHESMRYSLLA-GGKRVRPMLCIAACELVGGEESTAMPSACAVEMIHTMSL 59
Query: 120 IHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLR 179
+HDDLP MD+D RRG+P+NH ++G D+ +LAGDAL F+H+ T VP R++R
Sbjct: 60 MHDDLPFMDNDDLRRGKPTNHKIFGEDVTVLAGDALLAYAFEHMAVATKG--VPSERIVR 117
Query: 180 VIAEIARAVGSTGMAAGQFLDLEGEPN------LVEFVQEKKFGEMSECSAVCGGFLAGA 233
VI E+A+ +GS G+ AGQ +D+ E N +EF+ K + E S V G L GA
Sbjct: 118 VIGELAKCIGSEGLVAGQVVDICSEGNSDVGLDHLEFIHIHKTAALLEGSVVLGAILGGA 177
Query: 234 DDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVA-------FYGVE 286
+D E++ LR++ R +G+L+QVVDDIL+ T +E K GK +A G++
Sbjct: 178 NDQEVEKLRKFARCIGLLFQVVDDILDV---TKSSQELGKTAGKDLLADKTTYPKLIGID 234
Query: 287 KAMEVAEELRAKAKEEL 303
K+ E AE+L +A+E+L
Sbjct: 235 KSKEFAEKLNREAQEQL 251
>gi|390440821|ref|ZP_10229021.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis sp.
T1-4]
gi|389835867|emb|CCI33147.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis sp.
T1-4]
Length = 309
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 181/305 (59%), Gaps = 22/305 (7%)
Query: 36 RSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
++ F L +Y ++ L+ ++ + P +IYE+MRYS+LA G KR P++C+A CE
Sbjct: 13 KNKNFSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGG-KRLRPILCLATCE 71
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
L G + A PTACALEM+H SLIHDDLP MD+D RRG+ +NH V+G DIAILAGD L
Sbjct: 72 LMGGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGL 131
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLE--GEPNL----VE 209
F+++ + T VP ++L VIA + R VG+ G+ GQ LDLE G+P++ +
Sbjct: 132 LAYAFEYVATQTRN--VPPLQILEVIARLGRTVGAAGLVGGQVLDLESAGKPDISAETLG 189
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
F+ K G + E S V G LAGA ++I L RY + +G+ +Q++DD+L+ T +E
Sbjct: 190 FIHTHKTGSLLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDI---TATNE 246
Query: 270 EKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
E K GK +Y + +G+E + + A++L A EL + + + PL + +Y
Sbjct: 247 ELGKTAGKDLQAQKATYPSLWGIEGSRQQAQQLIDSAIGELSGYDEAAE---PLRAIAEY 303
Query: 323 AADRE 327
+R+
Sbjct: 304 IVNRK 308
>gi|297836608|ref|XP_002886186.1| hypothetical protein ARALYDRAFT_480767 [Arabidopsis lyrata subsp.
lyrata]
gi|297332026|gb|EFH62445.1| hypothetical protein ARALYDRAFT_480767 [Arabidopsis lyrata subsp.
lyrata]
Length = 372
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 121/303 (39%), Positives = 180/303 (59%), Gaps = 25/303 (8%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
FD K Y I++ L++AI + P I+++MRY++LA G KR P++C+AACEL G
Sbjct: 78 NFDFKPYMINKAETINRALDEAIPLIEPLNIHKAMRYAILA-GGKRVRPILCLAACELVG 136
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
A ACA+EM+H SLI DDLPCMD+D RRG+P+ H V+G +AIL+G AL L
Sbjct: 137 GEERLAIQAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLAL 196
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE---PNLV-----EF 210
F+H+ V +++RV+ E+A+++G+ G+ AGQ +DL E PN V E+
Sbjct: 197 AFEHLTEAD----VSSKKMVRVVKELAKSIGTKGLVAGQAMDLSSEGLDPNDVGLEDLEY 252
Query: 211 VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEE 270
+ K G + E SAV G + G ++EI+ +R + R +G+L+QVVDDIL+ +T EE
Sbjct: 253 IHVHKTGALLEASAVIGAVIGGGSEEEIEKVRYFARCIGLLFQVVDDILD---ETKSSEE 309
Query: 271 KKKKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYA 323
K GK VA G+EK+ E ++L+ +AKE + F D V PL + ++
Sbjct: 310 LGKTAGKDQVAGKLTYPKVMGLEKSKEFVKKLKREAKEHIQGFD--SDKVKPLIALTNFI 367
Query: 324 ADR 326
A+R
Sbjct: 368 ANR 370
>gi|428769681|ref|YP_007161471.1| farnesyl-diphosphate synthase [Cyanobacterium aponinum PCC 10605]
gi|428683960|gb|AFZ53427.1| farnesyl-diphosphate synthase [Cyanobacterium aponinum PCC 10605]
Length = 325
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 121/301 (40%), Positives = 177/301 (58%), Gaps = 22/301 (7%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
F+LK Y +++ L+ ++ ++ PE+IYE+MRYS+LA G KR P++C+A EL G
Sbjct: 33 FNLKVYLQEKKEIVEKALDDSLPIEKPEKIYEAMRYSLLA-GGKRLRPILCLAVAELLGQ 91
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A PTACALEM+H SLIHDDLP MD+D RRG+ +NH VYG DIAILAGD L
Sbjct: 92 TEDVAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGRLTNHKVYGEDIAILAGDGLLAYA 151
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE------PNLVEFVQE 213
F+ + T +P R+++V+A + +AVG+ G+ GQ LDLE E + + F+
Sbjct: 152 FEFVAIKTS--CIPSERIVKVLAILGKAVGANGLVGGQVLDLECEGKADVTADTLSFIHR 209
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
+K G + E G LAGA +D++ L Y + +G+ +Q+VDDIL+ A + EE K
Sbjct: 210 RKTGALLEACVSSGAVLAGASEDDLARLSVYAQNIGLAFQIVDDILDVTATS---EELGK 266
Query: 274 KKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK +Y +G++ + + AEEL A +LD YGD PL + +Y +R
Sbjct: 267 TAGKDISAQKATYPRIWGLDTSRQKAEELIKNAIAQLD---IYGDKAQPLRAIAEYIINR 323
Query: 327 E 327
+
Sbjct: 324 K 324
>gi|297836610|ref|XP_002886187.1| hypothetical protein ARALYDRAFT_900253 [Arabidopsis lyrata subsp.
lyrata]
gi|297332027|gb|EFH62446.1| hypothetical protein ARALYDRAFT_900253 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 121/316 (38%), Positives = 187/316 (59%), Gaps = 27/316 (8%)
Query: 29 VSAASQLRSTQ--FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAP 86
+ +++Q+ + + F K Y I++ L+KAI + P IY++MRY++ A G KR
Sbjct: 97 LDSSTQIENKEDDFGFKPYMIRKAETINRALDKAIPLIEPLNIYKAMRYTIFA-GGKRVR 155
Query: 87 PVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVD 146
P++C+AACEL G +A P AC++EM+H SLI DDLPCMD+D RRG+P+ H V+G
Sbjct: 156 PILCLAACELVGGGERSAIPAACSVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGES 215
Query: 147 IAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE-- 204
+AIL+G AL L F+H+ V +++RV+ E+A+++G+ G+ AGQ +DL E
Sbjct: 216 VAILSGGALLALAFEHLTEAD----VSSKKMVRVVKELAKSIGTKGLVAGQAMDLSSEGL 271
Query: 205 -PN-----LVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDI 258
PN +E++ K G + E SAV G + G ++EI+ +R + R +G+L+QVVDDI
Sbjct: 272 DPNDFRLEDLEYIHVHKTGALLEASAVIGAVIGGGSEEEIEKVRSFARCIGLLFQVVDDI 331
Query: 259 LEAKAQTPRDEEKKKKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGD 311
L+ +T EE K GK VA G+EK+ E ++L A+E L F + D
Sbjct: 332 LD---ETKSSEELGKTAGKDKVAGKLTYPRVIGLEKSKEFVKKLNRDAREHLQGFDE--D 386
Query: 312 NVLPLYSFIDYAADRE 327
V PL + ++ A+R
Sbjct: 387 KVKPLIALTNFIANRN 402
>gi|443669312|ref|ZP_21134542.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
DIANCHI905]
gi|159030944|emb|CAO88634.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443330405|gb|ELS45123.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
DIANCHI905]
Length = 309
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 180/305 (59%), Gaps = 22/305 (7%)
Query: 36 RSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
++ F L +Y ++ L+ ++ + P +IYE+MRYS+LA G KR P++C+A CE
Sbjct: 13 KNENFSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGG-KRLRPILCLATCE 71
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
L G + A PTACALEM+H SLIHDDLP MD+D RRG+ +NH V+G DIAILAGD L
Sbjct: 72 LMGGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGL 131
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VE 209
F+++ + T VP ++L VIA + R VG+ G+ GQ LDL EG+P++ +
Sbjct: 132 LAYAFEYVATQTLN--VPPLQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLG 189
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
F+ +K G + E S V G LAGA ++I L RY + +G+ +Q++DD+L+ T E
Sbjct: 190 FIHTQKTGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDI---TATKE 246
Query: 270 EKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
E K GK +Y + +G+E + + A+ L A EL + + + PL + +Y
Sbjct: 247 ELGKTAGKDLQAQKATYPSLWGIEGSRQQAQHLIDSAINELSSYDEAAE---PLRAIAEY 303
Query: 323 AADRE 327
+R+
Sbjct: 304 IVNRK 308
>gi|425436138|ref|ZP_18816577.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9432]
gi|425449068|ref|ZP_18828911.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 7941]
gi|389679196|emb|CCH92000.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9432]
gi|389764903|emb|CCI09068.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 7941]
Length = 309
Score = 220 bits (560), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 180/305 (59%), Gaps = 22/305 (7%)
Query: 36 RSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
++ F L +Y ++ L+ ++ + P +IYE+MRYS+LA G KR P++C+A CE
Sbjct: 13 KNESFSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGG-KRLRPILCLATCE 71
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
L G + A PTACALEM+H SLIHDDLP MD+D RRG+ +NH V+G DIAILAGD L
Sbjct: 72 LMGGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGL 131
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VE 209
F+++ + T VP ++L VIA + R VG+ G+ GQ LDL EG+P++ +
Sbjct: 132 LAYAFEYVATQTLN--VPPLQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLG 189
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
F+ +K G + E S V G LAGA ++I L RY + +G+ +Q++DD+L+ T E
Sbjct: 190 FIHTQKTGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDI---TATKE 246
Query: 270 EKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
E K GK +Y + +G+E + + A+ L A EL + + + PL + +Y
Sbjct: 247 ELGKTAGKDLQAQKATYPSLWGIEGSRQQAQHLIDSAINELSSYDEAAE---PLRAIAEY 303
Query: 323 AADRE 327
+R+
Sbjct: 304 IVNRK 308
>gi|166364196|ref|YP_001656469.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
NIES-843]
gi|166086569|dbj|BAG01277.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
NIES-843]
Length = 309
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 182/305 (59%), Gaps = 22/305 (7%)
Query: 36 RSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
++ F L +Y ++ L+ ++ + P +IYE+MRYS+LA G KR P++C+A CE
Sbjct: 13 KNESFSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGG-KRLRPILCLATCE 71
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
L G + A PTACALEM+H SLIHDDLP MD+D RRG+ +NH V+G DIAILAGD L
Sbjct: 72 LMGGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGL 131
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLE--GEPNL----VE 209
F+++ + T VP ++L VIA + R VG+ G+ GQ LDLE G+P++ +
Sbjct: 132 LAYAFEYVATQTRN--VPPLQILEVIARLGRTVGAAGLVGGQVLDLESAGKPDISAETLG 189
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
F+ +K G + E S V G LAGA ++I L RY + +G+ +Q++DD+L+ T E
Sbjct: 190 FIHTQKTGALLETSVVSGAVLAGAKAEDIAKLARYAQNIGLAFQIIDDVLDI---TATKE 246
Query: 270 EKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
E K GK +Y + +G+E++ + A++L A EL + + + PL + +Y
Sbjct: 247 ELGKTAGKDLQAQKATYPSLWGIEESRQQAQQLIDSAIGELSGYDEAAE---PLRAIAEY 303
Query: 323 AADRE 327
+R+
Sbjct: 304 IVNRK 308
>gi|425459314|ref|ZP_18838800.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9808]
gi|389822992|emb|CCI29162.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9808]
Length = 326
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 181/305 (59%), Gaps = 22/305 (7%)
Query: 36 RSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
++ F L +Y ++ L+ ++ + P +IYE+MRYS+LA G KR P++C+A CE
Sbjct: 30 KNESFSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGG-KRLRPILCLATCE 88
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
L G + A PTACALEM+H SLIHDDLP MD+D RRG+ +NH V+G DIAILAGD L
Sbjct: 89 LMGGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGL 148
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VE 209
F+++ + T VP ++L VIA + R VG+ G+ GQ LDL EG+P++ +
Sbjct: 149 LAYAFEYVATQTRN--VPPLQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLG 206
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
F+ +K G + E S V G LAGA ++I L RY + +G+ +Q++DD+L+ T E
Sbjct: 207 FIHTQKTGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDI---TATKE 263
Query: 270 EKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
E K GK +Y + +G+E + + A++L A EL + + + PL + +Y
Sbjct: 264 ELGKTAGKDLQAQKATYPSLWGIEGSRQQAQQLIDSAINELSGYDEAAE---PLRAIAEY 320
Query: 323 AADRE 327
+R+
Sbjct: 321 IVNRK 325
>gi|425467096|ref|ZP_18846380.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9809]
gi|389830220|emb|CCI27968.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9809]
Length = 326
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 182/305 (59%), Gaps = 22/305 (7%)
Query: 36 RSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
++ F L +Y ++ L+ ++ + P +IYE+MRYS+LA G KR P++C+A CE
Sbjct: 30 KNESFSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGG-KRLRPILCLATCE 88
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
L G + A PTACALEM+H SLIHDDLP MD+D RRG+ +NH V+G DIAILAGD L
Sbjct: 89 LMGGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGL 148
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLE--GEPNL----VE 209
F+++ + T VP ++L VIA + R VG+ G+ GQ LDLE G+P++ +
Sbjct: 149 LAYAFEYVATQTRN--VPPLQILEVIARLGRTVGAAGLVGGQVLDLESAGKPDISAETLG 206
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
F+ +K G + E S V G LAGA ++I L RY + +G+ +Q++DD+L+ T E
Sbjct: 207 FIHTQKTGALLETSVVSGAVLAGAKAEDIAKLARYAQNIGLAFQIIDDVLDI---TATKE 263
Query: 270 EKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
E K GK +Y + +G+E++ + A++L A EL + + + PL + +Y
Sbjct: 264 ELGKTAGKDLQAQKATYPSLWGIEESRQQAQQLIDSAIGELSGYDEAAE---PLRAIAEY 320
Query: 323 AADRE 327
+R+
Sbjct: 321 IVNRK 325
>gi|442743257|gb|AFC88470.2| geranylgeranyl pyrophosphate synthase 4 [Nicotiana tabacum]
Length = 372
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/303 (38%), Positives = 181/303 (59%), Gaps = 21/303 (6%)
Query: 38 TQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
T FD K+Y I +++ L+ A+ ++ P + +E+MRYS+L++G KR PV+C+AACEL
Sbjct: 77 TVFDFKSYMHQKIKSVNRALDAAVPLREPLKFHEAMRYSLLSEG-KRVCPVLCIAACELV 135
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G A P AC +EMVHA ++HDDLPCMD+D RRG+ SNH V+G ++ +LAG +L
Sbjct: 136 GGQESTAMPAACGMEMVHAMCMMHDDLPCMDNDTLRRGKLSNHKVFGENVTVLAGYSLVA 195
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL----EGEPNL--VEFV 211
L F+H+ + T V ++R I E+AR +G G AAGQ LDL + + L +E++
Sbjct: 196 LAFEHMATATQG--VHPKTMVRAIGELARLIGPEGAAAGQVLDLLSGGKSDTGLEELEYI 253
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
K + +E +A+ G + GA ++EI LR++ + +G+L+QVVDDIL+ T E+
Sbjct: 254 HRHKTADFAEAAAIIGAMVGGATNEEINRLRKFSQCIGLLFQVVDDILDV---TKSSEQL 310
Query: 272 KKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAA 324
K GK +Y G+EK+ E A+ L +AKE+L F + PL + D+
Sbjct: 311 GKTAGKDLLANKLTYPKMIGIEKSKEYAQNLSKEAKEQLVGFDP--EKAAPLLAMADFVL 368
Query: 325 DRE 327
R+
Sbjct: 369 HRQ 371
>gi|125525184|gb|EAY73298.1| hypothetical protein OsI_01173 [Oryza sativa Indica Group]
Length = 314
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 176/301 (58%), Gaps = 18/301 (5%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
FD + Y + ++ L++A+ +PE++ ESMRYSVLA G KR PV+ +AACEL G
Sbjct: 19 SFDFQRYLSARADAVNDALDRAMPRGFPERLCESMRYSVLAGG-KRVRPVLALAACELVG 77
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
+ AA P ACA+EM+H SLIHDD+PCMDDD RRG+PSNH +G A+LAGDAL L
Sbjct: 78 GDAAAATPVACAVEMIHTMSLIHDDMPCMDDDALRRGRPSNHVAFGEFTALLAGDALHAL 137
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP-----NLVEFVQE 213
F+H+ H VP R LR +AE+ A G+ G+AAGQ D E E ++E++
Sbjct: 138 AFEHVARGCGDHGVPADRTLRAVAELGSASGTGGVAAGQVADKESEGLPVSLAMLEYIHV 197
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K + E +AV G + G D E++ +RRY R VG+L+QVVDD+L+ T E+ K
Sbjct: 198 HKTARLLEAAAVSGAIVGGGADAEVERVRRYARCVGLLFQVVDDVLD---MTSTSEQLGK 254
Query: 274 KKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK +Y GV+KA E A +L A A+ ELD F + PL + A R
Sbjct: 255 TAGKDVEADKATYPKLLGVDKAREYAADLLAMAEAELDGFD--AERAAPLRHLARFIAYR 312
Query: 327 E 327
+
Sbjct: 313 Q 313
>gi|1944371|dbj|BAA19583.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 373
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/302 (38%), Positives = 177/302 (58%), Gaps = 25/302 (8%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
F+ Y + +++ LE+AI V P +I+E+MRY++LA G KR P++C+A+CEL G
Sbjct: 80 FEFDPYMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAG-KRVRPILCLASCELVGG 138
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
AA P ACA+EM+H SLI DDLPCMD+D RRG+P+ H VYG +AIL+G AL L
Sbjct: 139 QENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLA 198
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP--------NLVEFV 211
F+H+ + + R++ + E+AR++G+ G+ AGQ +D+ E +EF+
Sbjct: 199 FEHMTTAE----ISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFI 254
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
K + E +AV G + G D+EI+S+R++ R +G+L+QVVDDIL+ +T EE
Sbjct: 255 HVHKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILD---ETKSSEEL 311
Query: 272 KKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAA 324
K GK +Y G+EK+ E + L A++ L F + V PL + + A
Sbjct: 312 GKTAGKDQLAGKLTYPKLIGLEKSKEFVKRLTKDARQHLQGFSS--EKVAPLVALTTFIA 369
Query: 325 DR 326
+R
Sbjct: 370 NR 371
>gi|15224064|ref|NP_179960.1| geranylgeranyl pyrophosphate synthase 4 [Arabidopsis thaliana]
gi|75218930|sp|O04046.2|GGPP2_ARATH RecName: Full=Heterodimeric geranylgeranyl pyrophosphate synthase
large subunit 2; Short=GGPP synthase 2; Short=GGPS2;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 2;
AltName: Full=Dimethylallyltranstransferase 2; AltName:
Full=Farnesyl diphosphate synthase 2; AltName:
Full=Farnesyltranstransferase 2; AltName:
Full=Geranyltranstransferase 2; Flags: Precursor
gi|3152604|gb|AAC17083.1| pregeranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|21593114|gb|AAM65063.1| pregeranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|26450970|dbj|BAC42592.1| putative pregeranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|28950937|gb|AAO63392.1| At2g23800 [Arabidopsis thaliana]
gi|206748358|gb|ACI22362.1| geranylgeranyl pyrophosphate synthase 2 [Arabidopsis thaliana]
gi|330252398|gb|AEC07492.1| geranylgeranyl pyrophosphate synthase 4 [Arabidopsis thaliana]
Length = 376
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/302 (38%), Positives = 177/302 (58%), Gaps = 25/302 (8%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
F+ Y + +++ LE+AI V P +I+E+MRY++LA G KR P++C+A+CEL G
Sbjct: 83 FEFDPYMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAG-KRVRPILCLASCELVGG 141
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
AA P ACA+EM+H SLI DDLPCMD+D RRG+P+ H VYG +AIL+G AL L
Sbjct: 142 QENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLA 201
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP--------NLVEFV 211
F+H+ + + R++ + E+AR++G+ G+ AGQ +D+ E +EF+
Sbjct: 202 FEHMTTAE----ISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFI 257
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
K + E +AV G + G D+EI+S+R++ R +G+L+QVVDDIL+ +T EE
Sbjct: 258 HVHKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILD---ETKSSEEL 314
Query: 272 KKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAA 324
K GK +Y G+EK+ E + L A++ L F + V PL + + A
Sbjct: 315 GKTAGKDQLAGKLTYPKLIGLEKSKEFVKRLTKDARQHLQGFSS--EKVAPLVALTTFIA 372
Query: 325 DR 326
+R
Sbjct: 373 NR 374
>gi|440753463|ref|ZP_20932666.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
TAIHU98]
gi|440177956|gb|ELP57229.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
TAIHU98]
Length = 309
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 180/305 (59%), Gaps = 22/305 (7%)
Query: 36 RSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
++ F L +Y ++ L+ ++ + P +IYE+MRYS+LA G KR P++C+A CE
Sbjct: 13 KNESFSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGG-KRLRPILCLATCE 71
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
L G + A PTACALEM+H SLIHDDLP MD+D RRG+ +NH V+G DIAILAGD L
Sbjct: 72 LMGGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGL 131
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VE 209
F+++ + T VP ++L VIA + R VG+ G+ GQ LDL EG+P++ +
Sbjct: 132 LAYAFEYVATQTLN--VPPLQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLG 189
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
F+ +K G + E S V G LAGA ++I L RY + +G+ +Q++DD+L+ T E
Sbjct: 190 FIHTQKTGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDI---TATKE 246
Query: 270 EKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
E K GK +Y + +G+E + + A+ L A EL + + + PL + +Y
Sbjct: 247 ELGKTAGKDLQAQKATYPSLWGIEGSRQQAQHLIDSAIGELSSYDEAAE---PLRAIAEY 303
Query: 323 AADRE 327
+R+
Sbjct: 304 IVNRK 308
>gi|186683902|ref|YP_001867098.1| polyprenyl synthetase [Nostoc punctiforme PCC 73102]
gi|186466354|gb|ACC82155.1| Polyprenyl synthetase [Nostoc punctiforme PCC 73102]
Length = 310
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 172/298 (57%), Gaps = 15/298 (5%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
F+L Y D L++AI + YPE+IYE+MRYS+LA G KR P++C+A CE+ G
Sbjct: 17 FNLVAYLKERQKLCDNALDRAIPIIYPEKIYEAMRYSLLAGG-KRVRPILCLATCEMMGG 75
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A PTACA+EM+H SLIHDDLP MD+D RRG+ +NH VYG D+AILAGD L L
Sbjct: 76 TIEMAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGDGLLALA 135
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN------LVEFVQE 213
F+ + TP + V L+VI + RA+G+ G+ GQ +DLE E + F+
Sbjct: 136 FELVALKTPAN-VNRELTLQVIVRLGRALGAAGLVGGQVVDLECEGKSDISLETLNFIHR 194
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILE---AKAQTPRDEE 270
K + E V GG +AGA +++Q L RY +G+ +Q++DDIL+ K Q +
Sbjct: 195 HKTSALLEACVVSGGIIAGASTEDVQRLTRYAENIGLAFQIIDDILDITSTKEQLGKTAG 254
Query: 271 KKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
K +K K +Y + +G+E++ A+EL A EL+ F GD PL + + R
Sbjct: 255 KDQKAKKVTYPSLWGLEESRLKAQELVKVACAELEPF---GDRAKPLQAIAHFITSRN 309
>gi|297719791|ref|NP_001172257.1| Os01g0248701 [Oryza sativa Japonica Group]
gi|5042458|gb|AAD38295.1|AC007789_21 putative geranylgeranyl pyrophosphate synthase [Oryza sativa
Japonica Group]
gi|11320851|dbj|BAB18334.1| putative geranylgeranyl pyrophosphate synthase [Oryza sativa
Japonica Group]
gi|255673061|dbj|BAH90987.1| Os01g0248701 [Oryza sativa Japonica Group]
Length = 376
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 129/301 (42%), Positives = 175/301 (58%), Gaps = 18/301 (5%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
FD + Y + + L++A+ +PE++ ESMRYSVLA G KR PV+ +AACEL G
Sbjct: 81 SFDFQRYLSARADAVHDALDRAMPRGFPERLCESMRYSVLAGG-KRVRPVLALAACELVG 139
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
+ AA P ACA+EM+H SLIHDD+PCMDDD RRG+PSNH +G A+LAGDAL L
Sbjct: 140 GDAAAATPVACAVEMIHTMSLIHDDMPCMDDDALRRGRPSNHVAFGEFTALLAGDALHAL 199
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP-----NLVEFVQE 213
F+H+ H VP R LR +AE+ A G+ G+AAGQ D E E ++E++
Sbjct: 200 AFEHVARGCGDHGVPADRTLRAVAELGSASGTGGVAAGQVADKESEGLPVSLAMLEYIHV 259
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K + E +AV G + G D E++ +RRY R VG+L+QVVDD+L+ T E+ K
Sbjct: 260 HKTARLLEAAAVSGAIVGGGADAEVERVRRYARCVGLLFQVVDDVLD---MTSTSEQLGK 316
Query: 274 KKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK +Y GV+KA E A +L A A+ ELD F + PL + A R
Sbjct: 317 TAGKDVEADKATYPKLLGVDKAREYAADLLAMAEAELDGFD--AERAAPLRHLARFIAYR 374
Query: 327 E 327
+
Sbjct: 375 Q 375
>gi|425441812|ref|ZP_18822079.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9717]
gi|389717377|emb|CCH98522.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9717]
Length = 326
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 180/305 (59%), Gaps = 22/305 (7%)
Query: 36 RSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
++ F L +Y ++ L+ ++ + P +IYE+MRYS+LA G KR P++C+A CE
Sbjct: 30 KNESFSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGG-KRLRPILCLATCE 88
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
L G + A PTACALEM+H SLIHDDLP MD+D RRG+ +NH V+G DIAILAGD L
Sbjct: 89 LMGGSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGL 148
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VE 209
F+++ + T VP ++L VIA + R VG+ G+ GQ LDL EG+P++ +
Sbjct: 149 LAYAFEYVATQTLN--VPPLQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLG 206
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
F+ +K G + E S V G LAGA ++I L RY + +G+ +Q++DD+L+ T E
Sbjct: 207 FIHTQKTGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDI---TATKE 263
Query: 270 EKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
E K GK +Y + +G+E + + A+ L A EL + + + PL + +Y
Sbjct: 264 ELGKTAGKDLQAQKATYPSLWGIEGSRQQAQHLIDSAIGELSSYDEAAE---PLRAIAEY 320
Query: 323 AADRE 327
+R+
Sbjct: 321 IVNRK 325
>gi|303271183|ref|XP_003054953.1| geranyl pyrophosphate synthase [Micromonas pusilla CCMP1545]
gi|226462927|gb|EEH60205.1| geranyl pyrophosphate synthase [Micromonas pusilla CCMP1545]
Length = 343
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 120/305 (39%), Positives = 177/305 (58%), Gaps = 22/305 (7%)
Query: 38 TQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
++ D Y I+Q L ++ YPE+++ESMRYS+LA G KR P +C+AACEL
Sbjct: 45 SELDFGNYIADKNKAIEQALSDSVPEMYPERLHESMRYSLLA-GGKRIRPCLCIAACELM 103
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G A PTACALEM+H SLIHDDLP MD+D RRG+P+NH VYG ++AILAGDAL
Sbjct: 104 GGTMEVAMPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDALLS 163
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP--------NLVE 209
F++I TP VP R LRV+ ++ + VGS G+ GQ +D+ E ++
Sbjct: 164 HAFEYIGRETPKS-VPAERTLRVLVDVGKCVGSEGLVGGQVVDIMSEGADADEVTLETLK 222
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
++ K G + E S G LAGA +++++ L +Y + +G+ +QVVDDIL+ T E
Sbjct: 223 YIHAHKTGALLEVSVTSGAILAGAKEEDVERLGKYAQLIGLAFQVVDDILDC---TQTSE 279
Query: 270 EKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
+ K GK +Y + G+E++ ++A++L +AKE L + PL D+
Sbjct: 280 QLGKTAGKDEAVGKATYPSLVGLEESKKIADDLITEAKELLRDYDP--KLAAPLLGLADF 337
Query: 323 AADRE 327
+R+
Sbjct: 338 IKNRQ 342
>gi|424513337|emb|CCO65959.1| geranylgeranyl pyrophosphate synthase [Bathycoccus prasinos]
Length = 376
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 122/308 (39%), Positives = 178/308 (57%), Gaps = 25/308 (8%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
+ + D Y I+Q L ++ YPE+++ESMRYS+LA G KR P + +AACE+
Sbjct: 76 NAEIDFAKYVKEKNAAIEQALSDSVPTIYPERLHESMRYSLLA-GGKRIRPCLAIAACEM 134
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
G + PTACALEM+H SLIHDDLP MD+D RRG P+NH VYG ++AILAGDAL
Sbjct: 135 VGGAQEVVMPTACALEMIHTMSLIHDDLPMMDNDDFRRGVPTNHKVYGEEMAILAGDALL 194
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLD-------LEGEPNLVE 209
F++I T VP ++LRVIA++ + VGS G+ GQ +D +EG+P +E
Sbjct: 195 SHAFEYIARETKG--VPAEKILRVIADVGKCVGSEGLVGGQVVDIESEGLAMEGKPVSLE 252
Query: 210 ---FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP 266
++ K G + E + V G L G +++I+ L +Y +G+ +QVVDDIL+ A +
Sbjct: 253 TLKYIHAHKTGALLETAVVSGAILGGGTEEDIERLGKYAYDIGLAFQVVDDILDCTATS- 311
Query: 267 RDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSF 319
EE K GK +Y + G+E++ +A+EL AKE+L + + PL
Sbjct: 312 --EELGKTAGKDVAVGKATYPSLLGLEESQRIADELIKSAKEQLSVYDQ--KKAAPLIGL 367
Query: 320 IDYAADRE 327
DY +R+
Sbjct: 368 ADYIKNRK 375
>gi|11467424|ref|NP_043281.1| prenyl transferase CrtE [Cyanophora paradoxa]
gi|1345836|sp|P48368.1|CRTE_CYAPA RecName: Full=Geranylgeranyl pyrophosphate synthase homolog;
Short=GGPP synthase; AltName:
Full=Farnesyltranstransferase
gi|1016225|gb|AAA81312.1| CrtE [Cyanophora paradoxa]
Length = 300
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 117/303 (38%), Positives = 178/303 (58%), Gaps = 22/303 (7%)
Query: 38 TQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
T F+L TY ++ L K+I P IY+S+RYS L+ G KR P++C+A+CEL
Sbjct: 6 TNFNLLTYLYERKEIVEDTLNKSIPRGNPTFIYDSIRYS-LSAGGKRIRPILCLASCELA 64
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G A PTACALEM+H SLIHDDLP MD+D RRG+P+NH +YG D+AILAGDAL
Sbjct: 65 GGTMEMALPTACALEMIHTMSLIHDDLPAMDNDSYRRGKPTNHIIYGEDLAILAGDALLA 124
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN------LVEFV 211
F+ I + T VP +++VIA++A +V ++G+ GQ +DL E + F+
Sbjct: 125 YAFEFIATQTKN--VPADLIVKVIAQVAHSVTTSGLVGGQIIDLSSEGKSDTTLETLNFI 182
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
K G + E + + G LAGA + ++ RY + +G+ +Q++DD+L+ +E+
Sbjct: 183 HIHKTGALLEAAVLSGALLAGAKEKDMNRFLRYAQNIGLAFQIIDDVLDI---ISTEEKL 239
Query: 272 KKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAA 324
K GK +Y +F+GVE++++ AE L +AKEE+ F + +PL + D+
Sbjct: 240 GKSIGKDLKTQKATYPSFWGVEESIKQAELLVEEAKEEILYFD---NKAIPLIAIADFIV 296
Query: 325 DRE 327
+R
Sbjct: 297 NRN 299
>gi|297825291|ref|XP_002880528.1| geranylgeranyl pyrophosphate synthase [Arabidopsis lyrata subsp.
lyrata]
gi|297326367|gb|EFH56787.1| geranylgeranyl pyrophosphate synthase [Arabidopsis lyrata subsp.
lyrata]
Length = 372
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 115/302 (38%), Positives = 177/302 (58%), Gaps = 25/302 (8%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
F+ Y + +++ L++AI V P +I+E+MRY++LA G KR P++C+A+CEL G
Sbjct: 79 FEFDPYMISKAESVNKALDEAIPVGEPLKIHEAMRYAILAAG-KRVRPILCLASCELVGG 137
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
AA P ACA+EM+H SLI DDLPCMD+D RRG+P+ H VYG +AIL+G AL L
Sbjct: 138 QENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLA 197
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP--------NLVEFV 211
F+H+ + + R++ + E+AR++G+ G+ AGQ +D+ E +EF+
Sbjct: 198 FEHMTTAE----ISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFI 253
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
K + E +AV G + G D+EI+S+R++ R +G+L+QVVDDIL+ +T EE
Sbjct: 254 HVHKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILD---ETKSSEEL 310
Query: 272 KKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAA 324
K GK +Y G+EK+ E + L A++ L F + V PL + + A
Sbjct: 311 GKTAGKDQLTGKLTYPKLMGLEKSKEFVKRLTKDARQHLQGFSS--EKVAPLVALTTFIA 368
Query: 325 DR 326
+R
Sbjct: 369 NR 370
>gi|376372994|gb|AFB35651.1| chloroplast geranylgeranyl diphosphate synthase 3 [Nicotiana
tabacum]
Length = 363
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 124/290 (42%), Positives = 184/290 (63%), Gaps = 21/290 (7%)
Query: 51 TEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACA 110
+++ LE ++ +K P +I+ESMRYS+LA G KR P++C+A+CEL G + A P ACA
Sbjct: 81 NSVNKALESSVLIKDPVKIHESMRYSLLA-GGKRIRPMLCIASCELVGGDESTAMPAACA 139
Query: 111 LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPH 170
+EM+H SLIHDDLPCMD+D RRG+P+NH +YG D+A+LAGDAL L F+HI + T
Sbjct: 140 VEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDALLALAFEHIATQTKG- 198
Query: 171 LVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQEKKFGEMSECSA 224
VP R++RVI E+A+ +G+ + AGQ +D+ EG ++ +EF+ K + E S
Sbjct: 199 -VPSHRIVRVIGELAKCIGAERLVAGQVVDIISEGISDVDLKHLEFIHLHKTAALLEGSV 257
Query: 225 VCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVA--- 281
V G L GAD +E++ LR++ R +G+L+QVVDDIL+ T ++ K GK VA
Sbjct: 258 VLGAILGGADAEEVEKLRKFARCIGLLFQVVDDILDV---TKSSQQLGKTAGKDLVADKV 314
Query: 282 ----FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
G++K+ + AEEL +A+ +L F + + PL + +Y A RE
Sbjct: 315 TYPKLIGIDKSRDFAEELNKEAQAQLAGFDQ--EKAAPLIALANYIAYRE 362
>gi|297834334|ref|XP_002885049.1| hypothetical protein ARALYDRAFT_478873 [Arabidopsis lyrata subsp.
lyrata]
gi|297330889|gb|EFH61308.1| hypothetical protein ARALYDRAFT_478873 [Arabidopsis lyrata subsp.
lyrata]
Length = 360
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 130/315 (41%), Positives = 192/315 (60%), Gaps = 22/315 (6%)
Query: 27 LPVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAP 86
+P S R++ FD K+Y ++ L+ ++ ++ P + E++RYS+LA G KR
Sbjct: 51 IPPEGKSDDRNSAFDFKSYMINKAKSVNAALDISVPLREPLTVQEAVRYSLLAGG-KRVR 109
Query: 87 PVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVD 146
P++C+A+CEL G N A P ACA+EM+H +SLIHDDLPCMD+ RRG+P+NH V+G D
Sbjct: 110 PMLCIASCELVGGNEATAMPAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVFGED 169
Query: 147 IAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP- 205
+A+LAGDAL L F+H+ LVP R++R +AE+ARA+G+TG+ AGQ +DL E
Sbjct: 170 MAVLAGDALLALAFEHMTV-VSSGLVPPERMIRAVAELARAIGTTGLVAGQMIDLASERL 228
Query: 206 -------NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDI 258
+EF+ K + E +AV G + G ++EI+ LR+Y R +G+L+QVVDDI
Sbjct: 229 NPHDAGLERLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDI 288
Query: 259 LEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGD 311
L+ T EE K GK +Y G+E++ EVAE+LR +A+E++ F +
Sbjct: 289 LDVTEST---EELGKTAGKDLMAGKLTYPRLIGLERSREVAEKLRKEAEEQVLGFDS--E 343
Query: 312 NVLPLYSFIDYAADR 326
N PL + Y A R
Sbjct: 344 NSAPLVALASYIACR 358
>gi|15231055|ref|NP_188651.1| geranylgeranyl diphosphate synthase 10 [Arabidopsis thaliana]
gi|75273683|sp|Q9LJY2.1|GGPPA_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 10,
mitochondrial; Short=GGPP synthase 10; Short=GGPS10;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 10;
AltName: Full=Dimethylallyltranstransferase 10; AltName:
Full=Farnesyl diphosphate synthase 10; AltName:
Full=Farnesyltranstransferase 10; AltName:
Full=Geranyltranstransferase 10; Flags: Precursor
gi|9293973|dbj|BAB01876.1| geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|91806447|gb|ABE65951.1| geranylgeranyl pyrophosphate synthase/GGPP
synthetase/farnesyltranstransferase [Arabidopsis
thaliana]
gi|332642821|gb|AEE76342.1| geranylgeranyl diphosphate synthase 10 [Arabidopsis thaliana]
Length = 344
Score = 217 bits (552), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 129/317 (40%), Positives = 182/317 (57%), Gaps = 29/317 (9%)
Query: 28 PVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPE-QIYESMRYSVLAKGTKRAP 86
P+++A+ S F +Y +++ LE+A+ ++ PE +I E+MRY++L+ G KR
Sbjct: 39 PLTSAA---SYDFKFMSYMVNKAKSVNKALEEAVPLREPELKIREAMRYTLLSDG-KRVR 94
Query: 87 PVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVD 146
P++C+AACEL G A ACA+EM+HA+SLI DDLPCMD+D RRG+P+NH V+G
Sbjct: 95 PMLCLAACELVGGQESTAMSAACAIEMLHASSLILDDLPCMDNDSLRRGKPTNHIVFGES 154
Query: 147 IAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP- 205
IAILA AL L Q S T + PE R+L+ + E+ +AV G+ AGQ DL GE
Sbjct: 155 IAILASQALIALAVQKTTSSTFADVPPE-RILKTVQEMVKAV--EGLVAGQQADLAGEGM 211
Query: 206 --------NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDD 257
+EF+ K + E +AV G + G D+EI+ LR Y R +G+++QVVDD
Sbjct: 212 RFDSDTGLEHLEFIHIHKTAALLEAAAVMGAIMGGGSDEEIERLRSYARCIGLMFQVVDD 271
Query: 258 ILEAKAQTPRDEEKKKKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYG 310
+L+ T EE K GK +A GVEK+ E AE L +A+E L F
Sbjct: 272 VLDV---TKSSEELGKTAGKDLIAGKLTYPRLMGVEKSKEYAERLNIEAREHLLGFDI-- 326
Query: 311 DNVLPLYSFIDYAADRE 327
D V PL S DY +R+
Sbjct: 327 DKVAPLVSLADYIVNRQ 343
>gi|116831222|gb|ABK28565.1| unknown [Arabidopsis thaliana]
Length = 345
Score = 217 bits (552), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 129/317 (40%), Positives = 182/317 (57%), Gaps = 29/317 (9%)
Query: 28 PVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPE-QIYESMRYSVLAKGTKRAP 86
P+++A+ S F +Y +++ LE+A+ ++ PE +I E+MRY++L+ G KR
Sbjct: 39 PLTSAA---SYDFKFMSYMVNKAKSVNKALEEAVPLREPELKIREAMRYTLLSDG-KRVR 94
Query: 87 PVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVD 146
P++C+AACEL G A ACA+EM+HA+SLI DDLPCMD+D RRG+P+NH V+G
Sbjct: 95 PMLCLAACELVGGQESTAMSAACAIEMLHASSLILDDLPCMDNDSLRRGKPTNHIVFGES 154
Query: 147 IAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP- 205
IAILA AL L Q S T + PE R+L+ + E+ +AV G+ AGQ DL GE
Sbjct: 155 IAILASQALIALAVQKTTSSTFADVPPE-RILKTVQEMVKAV--EGLVAGQQADLAGEGM 211
Query: 206 --------NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDD 257
+EF+ K + E +AV G + G D+EI+ LR Y R +G+++QVVDD
Sbjct: 212 RFDSDTGLEHLEFIHIHKTAALLEAAAVMGAIMGGGSDEEIERLRSYARCIGLMFQVVDD 271
Query: 258 ILEAKAQTPRDEEKKKKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYG 310
+L+ T EE K GK +A GVEK+ E AE L +A+E L F
Sbjct: 272 VLDV---TKSSEELGKTAGKDLIAGKLTYPRLMGVEKSKEYAERLNIEAREHLLGFDI-- 326
Query: 311 DNVLPLYSFIDYAADRE 327
D V PL S DY +R+
Sbjct: 327 DKVAPLVSLADYIVNRQ 343
>gi|15224199|ref|NP_179454.1| geranylgeranyl pyrophosphate synthase 3 [Arabidopsis thaliana]
gi|75266042|sp|Q9SLG2.1|GGPP4_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 4; Short=GGPP
synthase 4; Short=GGPS4; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase 4; AltName:
Full=Dimethylallyltranstransferase 4; AltName:
Full=Farnesyl diphosphate synthase 4; AltName:
Full=Farnesyltranstransferase 4; AltName:
Full=Geranyltranstransferase 4; Flags: Precursor
gi|4185130|gb|AAD08933.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|20197573|gb|AAM15136.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|91806196|gb|ABE65826.1| geranylgeranyl pyrophosphate synthase/GGPP
synthetase/farnesyltranstransferase [Arabidopsis
thaliana]
gi|330251694|gb|AEC06788.1| geranylgeranyl pyrophosphate synthase 3 [Arabidopsis thaliana]
Length = 372
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 123/302 (40%), Positives = 178/302 (58%), Gaps = 25/302 (8%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
FD K Y + I++ L++AI + P I+++MRY++LA G KR P++C+AACEL G
Sbjct: 79 FDFKPYMISKAETINRALDEAIPLIEPLNIHKAMRYAILA-GGKRVRPILCLAACELVGG 137
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A ACA+EM+H SLI DDLPCMD+D RRG+P+ H V+G +AIL+G AL L
Sbjct: 138 EERLAIQAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALA 197
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EG-EPNLV-----EFV 211
F+H+ V +++R + E+A+++G+ G+ AGQ DL EG E N V E++
Sbjct: 198 FEHLTEAD----VSSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYI 253
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
K G + E SAV G + G + EI+ +R + R +G+L+QVVDDIL+ +T EE
Sbjct: 254 HVHKTGSLLEASAVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILD---ETKSSEEL 310
Query: 272 KKKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAA 324
K GK VA GVEK+ E E+L+ A+E L F D V PL + ++ A
Sbjct: 311 GKTAGKDKVAGKLTYPKVIGVEKSKEFVEKLKRDAREHLQGFD--SDKVKPLIALTNFIA 368
Query: 325 DR 326
+R
Sbjct: 369 NR 370
>gi|116831087|gb|ABK28498.1| unknown [Arabidopsis thaliana]
Length = 373
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 123/302 (40%), Positives = 178/302 (58%), Gaps = 25/302 (8%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
FD K Y + I++ L++AI + P I+++MRY++LA G KR P++C+AACEL G
Sbjct: 79 FDFKPYMISKAETINRALDEAIPLIEPLNIHKAMRYAILA-GGKRVRPILCLAACELVGG 137
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A ACA+EM+H SLI DDLPCMD+D RRG+P+ H V+G +AIL+G AL L
Sbjct: 138 EERLAIQAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALA 197
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EG-EPNLV-----EFV 211
F+H+ V +++R + E+A+++G+ G+ AGQ DL EG E N V E++
Sbjct: 198 FEHLTEAD----VSSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYI 253
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
K G + E SAV G + G + EI+ +R + R +G+L+QVVDDIL+ +T EE
Sbjct: 254 HVHKTGSLLEASAVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILD---ETKSSEEL 310
Query: 272 KKKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAA 324
K GK VA GVEK+ E E+L+ A+E L F D V PL + ++ A
Sbjct: 311 GKTAGKDKVAGKLTYPKVIGVEKSKEFVEKLKRDAREHLQGFD--SDKVKPLIALTNFIA 368
Query: 325 DR 326
+R
Sbjct: 369 NR 370
>gi|218245046|ref|YP_002370417.1| polyprenyl synthetase [Cyanothece sp. PCC 8801]
gi|257058070|ref|YP_003135958.1| polyprenyl synthetase [Cyanothece sp. PCC 8802]
gi|218165524|gb|ACK64261.1| Polyprenyl synthetase [Cyanothece sp. PCC 8801]
gi|256588236|gb|ACU99122.1| Polyprenyl synthetase [Cyanothece sp. PCC 8802]
Length = 309
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/311 (37%), Positives = 177/311 (56%), Gaps = 28/311 (9%)
Query: 33 SQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVA 92
+Q ++ FDL +Y ++ L++++ + PE IYE+MRYS+LA G KR P++C+
Sbjct: 10 TQQETSNFDLASYLKDKQQLVEAALDRSLAITRPETIYEAMRYSLLAGG-KRLRPILCLT 68
Query: 93 ACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAG 152
CEL G A PTACALEM+H SLIHDDLP MD+D RRG+ +NH YG DIAILAG
Sbjct: 69 TCELLGGTLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKKYGEDIAILAG 128
Query: 153 DALFPLGFQHIVSHT---PPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL 207
D L F++ + T PH ++ V+ + R VG G+ GQ LDL EG+P++
Sbjct: 129 DGLLAYAFEYAATQTRNVDPH-----NLINVLGRLGRTVGPAGLVGGQVLDLESEGKPDI 183
Query: 208 ----VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA 263
++F+ K G + E S V G LAG ++IQ L +Y + +G+ +Q++DDIL+
Sbjct: 184 TVDTLKFIHTHKTGALLETSVVSGAILAGGSTEDIQRLSQYAQNIGLAFQIIDDILDI-- 241
Query: 264 QTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPL 316
T EE K GK +Y + +G+E++ + A+ L + A +L YG+ PL
Sbjct: 242 -TSTQEELGKTAGKDLRDQKATYPSLWGLEESKKQAQNLVSGAIAQL---TPYGNKAEPL 297
Query: 317 YSFIDYAADRE 327
+ ++ R
Sbjct: 298 RAIANFIVTRN 308
>gi|33240579|ref|NP_875521.1| polyprenyl synthetase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|33238107|gb|AAQ00174.1| Geranylgeranyl pyrophosphate synthase [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
Length = 300
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 120/300 (40%), Positives = 173/300 (57%), Gaps = 21/300 (7%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
FD Y T I+ L+ ++ + P Q+ E+MRYS+LA G KR P++C+AACEL G
Sbjct: 9 FDFTAYLAKARTRIESALDASLGPERPNQLREAMRYSLLAGG-KRLRPILCLAACELTGS 67
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+ A TA A+EM+H SLIHDDLP MD+D RRG+P+NH VYG IAILAGDAL
Sbjct: 68 DSENAISTAVAIEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGEAIAILAGDALLTRA 127
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEK 214
F+ + +P VP+ R+L+V+ E++ G+ G+ GQ DLE E V EF+
Sbjct: 128 FEMVALRSPN--VPKDRLLKVVGELSLVAGAPGLVGGQVEDLESEGKAVDLDTLEFIHIH 185
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKK 274
K G + + S VCG + GAD+D + +L Y + +G+ +Q+VDDIL+ A + E K
Sbjct: 186 KTGALLKASVVCGALIGGADEDLLIALSTYAKGIGLAFQIVDDILDVTASS---EVLGKT 242
Query: 275 KGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
GK +Y G++++ + A+EL K+K D + D PL S DY +R+
Sbjct: 243 AGKDLLADKSTYPKLLGLDESRKKAKELIRKSK---DVIHPWSDKAAPLLSLADYIINRD 299
>gi|67924905|ref|ZP_00518297.1| Polyprenyl synthetase [Crocosphaera watsonii WH 8501]
gi|67853239|gb|EAM48606.1| Polyprenyl synthetase [Crocosphaera watsonii WH 8501]
Length = 309
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 179/308 (58%), Gaps = 22/308 (7%)
Query: 33 SQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVA 92
+ ++ F+L +Y ++ L++++ + PE+IYE+MRYS+LA G KR P++C+
Sbjct: 10 THTEASNFELASYLKEKKQLVEAALDQSLHITRPEKIYEAMRYSLLAGG-KRLRPILCLT 68
Query: 93 ACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAG 152
CEL G + PTACALEM+H SLIHDDLP MD+D RRG+ +NH VYG DIAILAG
Sbjct: 69 TCELMGGTVEMSLPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAG 128
Query: 153 DALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP------N 206
DAL F+++ + T V P ++ VIA + R VG+ G+ GQ LDLE E +
Sbjct: 129 DALLSYAFEYVATQTCN--VDFPNLIDVIARLGRTVGAAGLVGGQVLDLESEGRTDVTVD 186
Query: 207 LVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP 266
++F+ K G + E S V G LAGA ++I+ L RY + +G+ +Q++DD+L+ A +
Sbjct: 187 TLKFIHIHKTGALLETSVVSGAILAGAKPEDIERLSRYAQNIGLAFQIIDDVLDVTASS- 245
Query: 267 RDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSF 319
EE K GK +Y + +G+E++ + A+ L A +L YG PL +
Sbjct: 246 --EELGKTAGKDERAQKATYPSLWGLEESQKQAQALIDDAIAQL---SPYGQAAQPLEAI 300
Query: 320 IDYAADRE 327
+ R+
Sbjct: 301 AQFIVARK 308
>gi|359477279|ref|XP_002275812.2| PREDICTED: geranylgeranyl pyrophosphate synthase 1,
chloroplastic-like [Vitis vinifera]
Length = 380
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/338 (38%), Positives = 191/338 (56%), Gaps = 27/338 (7%)
Query: 11 PPCVCLPRKFPVRCSSLP------VSAAS--QLRSTQFDLKTYWTTLITEIDQNLEKAIT 62
P + +P +P R S+ VSA Q F+ K Y ++Q L+ AI
Sbjct: 48 PRNLSIPLLWPTRRPSVTSFSYSYVSAGDTPQKERPDFNFKAYMLEKAKSVNQALDTAIP 107
Query: 63 VKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHD 122
++ P +I+++MRYS+L G KR P++C++ACEL G A P CA+EM+H SL+ D
Sbjct: 108 LREPLEIHKAMRYSLL-DGGKRIHPIVCISACELVGGQESTAMPVVCAVEMLHVVSLMQD 166
Query: 123 DLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIA 182
DLPCMD+D RRG+PSNH +G + ILA DAL L F+H+ + + +VP + I
Sbjct: 167 DLPCMDNDDIRRGKPSNHKAFGESVTILAVDALLALAFEHVATMSTVGVVPPMVTVHAIQ 226
Query: 183 EIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQEKKFGEMSECSAVCGGFLAGADDD 236
E+AR++GS G+ AGQFLDL EG P + +E + K G + E SAV G L G +
Sbjct: 227 ELARSIGSQGLVAGQFLDLSSEGSPEIGLEGLESIHINKAGPLLEASAVIGAMLGGGSSE 286
Query: 237 EIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVA-------FYGVEKAM 289
+++ LR++GR VG+LYQVVDDIL+ T +E K GK VA G+EK+
Sbjct: 287 QMEILRKFGRCVGLLYQVVDDILDITKST---QELGKTAGKDLVADKVTYPKLVGIEKSR 343
Query: 290 EVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
E AE+L A + L F + + L + +++A R+
Sbjct: 344 EFAEKLNGDAWDMLSEFDQ--EKAASLLAMVNFATYRQ 379
>gi|416403979|ref|ZP_11687631.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Crocosphaera
watsonii WH 0003]
gi|357261577|gb|EHJ10825.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Crocosphaera
watsonii WH 0003]
Length = 307
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 179/308 (58%), Gaps = 22/308 (7%)
Query: 33 SQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVA 92
+ ++ F+L +Y ++ L++++ + PE+IYE+MRYS+LA G KR P++C+
Sbjct: 8 THTEASNFELASYLKEKKQLVEAALDQSLHITRPEKIYEAMRYSLLAGG-KRLRPILCLT 66
Query: 93 ACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAG 152
CEL G + PTACALEM+H SLIHDDLP MD+D RRG+ +NH VYG DIAILAG
Sbjct: 67 TCELMGGTVEMSLPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAG 126
Query: 153 DALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP------N 206
DAL F+++ + T V P ++ VIA + R VG+ G+ GQ LDLE E +
Sbjct: 127 DALLSYAFEYVATQTCN--VDFPNLIDVIARLGRTVGAAGLVGGQVLDLESEGRTDVTVD 184
Query: 207 LVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP 266
++F+ K G + E S V G LAGA ++I+ L RY + +G+ +Q++DD+L+ A +
Sbjct: 185 TLKFIHIHKTGALLETSVVSGAILAGAKPEDIERLSRYAQNIGLAFQIIDDVLDVTASS- 243
Query: 267 RDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSF 319
EE K GK +Y + +G+E++ + A+ L A +L YG PL +
Sbjct: 244 --EELGKTAGKDERAQKATYPSLWGLEESQKQAQALIDDAIAQL---SPYGQAAQPLEAI 298
Query: 320 IDYAADRE 327
+ R+
Sbjct: 299 AQFIVARK 306
>gi|224069444|ref|XP_002302978.1| predicted protein [Populus trichocarpa]
gi|222844704|gb|EEE82251.1| predicted protein [Populus trichocarpa]
Length = 287
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 180/289 (62%), Gaps = 20/289 (6%)
Query: 51 TEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACA 110
++++ L++A+ +++P +I+E+MRYS+LA G KR P++C+A+CEL G + A PTACA
Sbjct: 6 NQVNKALDEAVPLQHPRKIHEAMRYSLLA-GGKRVRPILCIASCELVGGDEELAMPTACA 64
Query: 111 LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPH 170
LEM+H SLIHDDLPCMD+D RRG P++H V+G D A+LAGDAL L F+H+ +T
Sbjct: 65 LEMIHTMSLIHDDLPCMDNDDLRRGMPTSHKVFGEDTAVLAGDALLALAFEHVARNTKN- 123
Query: 171 LVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAV 225
V RV++ +AE+ AVGS G+ AGQ +D+E E V E++ K ++ E + V
Sbjct: 124 -VSSDRVVQALAELGSAVGSKGLVAGQVVDIESEGKEVSLSTLEYIHVHKTAKLLEAAVV 182
Query: 226 CGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------S 278
CG + GAD ++ LR+Y R++G+L+QVVDDIL+ T EE K GK +
Sbjct: 183 CGAIMGGADATSVERLRKYARSIGLLFQVVDDILD---MTKSSEELGKTAGKDLTSDKAT 239
Query: 279 YVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
Y G+++A + A +L +A +EL + PLY Y A R+
Sbjct: 240 YPKLIGIDEAKKFAAQLTDQANQELGFYDPV--KAAPLYHLASYIASRQ 286
>gi|428777168|ref|YP_007168955.1| farnesyl-diphosphate synthase [Halothece sp. PCC 7418]
gi|428691447|gb|AFZ44741.1| farnesyl-diphosphate synthase [Halothece sp. PCC 7418]
Length = 307
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 121/305 (39%), Positives = 178/305 (58%), Gaps = 22/305 (7%)
Query: 36 RSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
++ FDL +Y +++ L++++ V P QIYE+MRYS+LA G KR P++C+A CE
Sbjct: 11 QTLAFDLDSYLQARKAIVEKALDQSLRVGEPPQIYEAMRYSLLAGG-KRLRPILCLATCE 69
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
L G + A PTACALEM+H SLIHDDLP MD+D RRG+ +NH +G DIAILAGD L
Sbjct: 70 LVGGSIEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKKFGEDIAILAGDGL 129
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VE 209
F++I ++T V VL+V++++ AVG+TG+ GQ +DL EG P++ +
Sbjct: 130 LAYAFEYIATYTQG--VEPAAVLKVVSKLGHAVGATGLVGGQVVDLASEGNPDINLETLN 187
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
++ K G + E V G L GA ++++ L RY +G+ +Q+VDDIL+ T E
Sbjct: 188 YIHTHKTGALLEACVVSGAILGGATEEDLGRLSRYAYDIGLAFQIVDDILDI---TATQE 244
Query: 270 EKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
E K GK +Y G+E + A+EL A EL YGD+ + L +
Sbjct: 245 ELGKTAGKDLEADKATYPRLLGLEASKAKADELTEAACAEL---ASYGDSAMALQAIAQL 301
Query: 323 AADRE 327
A+R+
Sbjct: 302 IANRK 306
>gi|88910043|gb|ABD57975.1| geranyl diphosphate synthase [Arnebia euchroma]
Length = 338
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 119/304 (39%), Positives = 181/304 (59%), Gaps = 22/304 (7%)
Query: 38 TQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
++FD K+Y IT I++ L+ A+ + P +++E+MRY++L+ G KR P++C+AACEL
Sbjct: 42 SRFDFKSYMINKITSINEALDSAVPLIEPIKLHEAMRYTLLS-GGKRVRPIVCIAACELV 100
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G + PTACA EM+H+ S++ DDLPCMD+D RRG+ SNH VYG I +LA +L
Sbjct: 101 GGHESTVMPTACAQEMIHSMSVMLDDLPCMDNDDFRRGKLSNHRVYGEKITLLAVRSLQA 160
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEP-----NLVEF 210
L H+V+ T VP R++R + E+A GS G AAGQ DL GE +E
Sbjct: 161 LAVDHVVTATRG--VPPERLVRALTEMAILTGSKGAAAGQIADLCSSGEDFNVSIEQLEH 218
Query: 211 VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEE 270
+ +K G + E S V G + GA ++EI+ LR++ + +G+++Q+VDD+L+ T E
Sbjct: 219 IHMQKTGTLCEGSVVSGAIIGGASEEEIEKLRKFSKCIGLMFQIVDDVLDV---TKSSME 275
Query: 271 KKKKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYA 323
K GK VA G+EK+ E+A +L ++AKE+L F + + PL + DY
Sbjct: 276 LGKPAGKDVVAAKATYPRLIGIEKSRELALKLNSEAKEQLSGFDQ--EKAAPLIALADYI 333
Query: 324 ADRE 327
R+
Sbjct: 334 VARQ 337
>gi|1229164|gb|AAB67730.1| pregeranygeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 378
Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 114/302 (37%), Positives = 175/302 (57%), Gaps = 25/302 (8%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
F+ Y + +++ LE+AI V P +I+E+MRY++LA G KR P++C+A+CEL G
Sbjct: 85 FEFDPYMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAG-KRVRPILCLASCELVGG 143
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A P ACA+EM+H SLI DDLPCMD+D RRG+P+ VYG +AIL+G AL L
Sbjct: 144 QENATIPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTDKVYGEGVAILSGGALLSLA 203
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP--------NLVEFV 211
F+H+ + + R++ + E+AR++G+ G+ AGQ +D+ E +EF+
Sbjct: 204 FEHMTTAE----ISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFI 259
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
K + E +AV G + G D+EI+S+R++ R +G+L+QVVDDIL+ +T EE
Sbjct: 260 HVHKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILD---ETKSSEEL 316
Query: 272 KKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAA 324
K GK +Y G+EK+ E + L A++ L F + V PL + + A
Sbjct: 317 GKTAGKDQLAGKLTYPKLIGLEKSKEFVKRLTKDARQHLQGFSS--EKVAPLVALTTFIA 374
Query: 325 DR 326
+R
Sbjct: 375 NR 376
>gi|428772609|ref|YP_007164397.1| farnesyl-diphosphate synthase [Cyanobacterium stanieri PCC 7202]
gi|428686888|gb|AFZ46748.1| farnesyl-diphosphate synthase [Cyanobacterium stanieri PCC 7202]
Length = 294
Score = 213 bits (543), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 172/294 (58%), Gaps = 19/294 (6%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
FDL++Y ++++L++++ + PE+IYESMRYS+LA G KR P++C+A CEL G
Sbjct: 2 FDLQSYLKEKQKLVEKSLDESLPMGKPEKIYESMRYSLLA-GGKRLRPILCLATCELMGG 60
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A P+ACALEM+H SLIHDDLP MD+D RRG+ +NH VYG DIAILAGD L
Sbjct: 61 TDEMALPSACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDIAILAGDGLLTYA 120
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE------PNLVEFVQE 213
F+++ T VP VL VI + +AVG+ G+ GQ +DLE E ++ F+
Sbjct: 121 FEYVARETKG--VPAENVLEVIKILTKAVGAEGLVGGQVMDLECEGKTDVTAEMLSFIHI 178
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K G + E G LAGA +++ L Y + +G+ +Q++DDIL+ A T EE K
Sbjct: 179 HKTGALLEACVTSGAVLAGATQEDLSRLSIYAKNIGLAFQIIDDILDVTATT---EELGK 235
Query: 274 KKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
GK +Y +G+E++ A+EL A +L+ + + ++ L FI
Sbjct: 236 TAGKDLSADKATYPKLWGLEESKAKADELIESAIAQLEVYGEKAQSLKALAEFI 289
>gi|124022642|ref|YP_001016949.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9303]
gi|123962928|gb|ABM77684.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9303]
Length = 306
Score = 213 bits (543), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 121/303 (39%), Positives = 176/303 (58%), Gaps = 21/303 (6%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
ST FD Y +++ L+ ++ + PEQ+ E+MRYS+LA G KR P++C+AACEL
Sbjct: 12 STFFDFPAYLAAAKASVEEALDDSLGPERPEQLREAMRYSLLAGG-KRLRPILCIAACEL 70
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
G A PTA ALEM+H SLIHDDLP MD+D RRG+P+NH VYG +AILAGDAL
Sbjct: 71 AGGEPTQALPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGDALL 130
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFV 211
F+ +V+ + PE R+L+V+ E++ G+ G+ GQ +DLE E V EF+
Sbjct: 131 TRSFE-MVALRSKGVAPE-RLLKVVGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEFI 188
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
K G + +CG + GA+DD I +LR Y R +G+ +Q++DDIL+ A + +
Sbjct: 189 HLHKTGALLSACVICGALIGGAEDDLIDALRIYARGIGLAFQIIDDILDVTASS---DVL 245
Query: 272 KKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAA 324
K GK +Y G+E++ AE L ++AK LD ++ + PL + DY
Sbjct: 246 GKTAGKDLLADKTTYPKLLGLEESRRRAELLVSEAKAALDPWQS---SAAPLLALADYIT 302
Query: 325 DRE 327
R+
Sbjct: 303 SRD 305
>gi|116073079|ref|ZP_01470341.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9916]
gi|116068384|gb|EAU74136.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9916]
Length = 317
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/313 (38%), Positives = 179/313 (57%), Gaps = 21/313 (6%)
Query: 30 SAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVM 89
SA S FD K Y + ++ L+ ++ + PE + E+MRYS+LA G KR P++
Sbjct: 10 SARSGGDQQAFDFKAYLGSQKQLVEAALDDSLGPERPESLREAMRYSLLAGG-KRLRPIL 68
Query: 90 CVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAI 149
C+AACEL G + A PTA ALEM+H SLIHDDLP MD+D RRG+P+NH VYG +AI
Sbjct: 69 CLAACELAGGDPALAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAI 128
Query: 150 LAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP---- 205
LAGDAL F+ + +P VP R+L+V+AE++ G+ G+ GQ +DLE E
Sbjct: 129 LAGDALLTRAFEMVSLRSPG--VPAERLLKVVAELSLVAGAPGLVGGQVVDLECEGKDVD 186
Query: 206 -NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQ 264
+ +E++ K G + + + G + GAD+ ++ SLR Y R +G+ +Q+VDDIL+ A
Sbjct: 187 LDTLEYIHLHKTGALLKACVITGALIGGADEAQLDSLRTYARGIGLAFQIVDDILDVTAS 246
Query: 265 TPRDEEKKKKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVL--- 314
+ + K GK +A G+E++ A+ L +AK LD FK G +
Sbjct: 247 S---DVLGKTAGKDLIADKTTYPKLLGLEESRLRAKGLIQEAKTSLDAFKPVGGGSVQAA 303
Query: 315 PLYSFIDYAADRE 327
PL + DY R+
Sbjct: 304 PLLALADYVIGRD 316
>gi|427724764|ref|YP_007072041.1| farnesyl-diphosphate synthase [Leptolyngbya sp. PCC 7376]
gi|427356484|gb|AFY39207.1| farnesyl-diphosphate synthase [Leptolyngbya sp. PCC 7376]
Length = 301
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/305 (37%), Positives = 173/305 (56%), Gaps = 23/305 (7%)
Query: 36 RSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
++ F L+ Y ++ L+++I P +YE+MRYS+LA G KR P++C+AAC
Sbjct: 6 KAQGFSLERYLKEKKAIVETALDQSIVTAEPVTVYEAMRYSLLAGG-KRLRPILCLAACN 64
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
+ G A TACALEM+H SLIHDDLP MD+D RRG+P+NH VYG DIAILAGD L
Sbjct: 65 MLGGTTEMAMNTACALEMIHTMSLIHDDLPSMDNDDLRRGKPTNHKVYGEDIAILAGDGL 124
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN------LVE 209
F+++ VP R+L+V+ + +AVG+ G+ GQ +DL+ E +
Sbjct: 125 LSYAFEYVAR---TQGVPADRLLQVVIRLGQAVGAEGLVGGQVVDLQSEGKTDVSIETLN 181
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
F+ K G + E G LAGA++ +IQ L++Y + +G+ +Q++DDIL+ T E
Sbjct: 182 FIHTHKTGALLEVCVTSGAILAGAENAKIQKLQKYAQNIGLTFQIIDDILDI---TATQE 238
Query: 270 EKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
E K GK +Y + +G+EK+ A+ L E + + YG + PL + +Y
Sbjct: 239 ELGKTAGKDLDAQKVTYPSLWGLEKSRSEAQRL---TDEAIASLEDYGASAAPLKALAEY 295
Query: 323 AADRE 327
+R+
Sbjct: 296 IINRK 300
>gi|297832526|ref|XP_002884145.1| geranylgeranyl diphosphate synthase [Arabidopsis lyrata subsp.
lyrata]
gi|297329985|gb|EFH60404.1| geranylgeranyl diphosphate synthase [Arabidopsis lyrata subsp.
lyrata]
Length = 329
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/323 (36%), Positives = 178/323 (55%), Gaps = 38/323 (11%)
Query: 20 FPVRCSSLPVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLA 79
F + S V+ + +FD +Y +++ L+ A++++ P +I+E+MRYS+LA
Sbjct: 29 FSLSTVSSVVTGEESIIHDKFDFMSYMIGKANSVNKALDSAVSLREPIKIHEAMRYSLLA 88
Query: 80 KGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSN 139
G KR PV+C+AACEL G A P ACA+EM+H SLIHDDLP
Sbjct: 89 GG-KRVRPVLCIAACELVGGEEFLALPAACAVEMIHTMSLIHDDLP-------------- 133
Query: 140 HTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFL 199
+G D+A+LAGDAL F+H+ + TP + P RV+R I E+A+A+GS G+ AGQ +
Sbjct: 134 --FFGEDVAVLAGDALLSFAFEHLATETPEIISP-ARVVRAIGELAKAIGSEGLVAGQVV 190
Query: 200 DLEGEP--------NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVL 251
DL E L+EF+ K + E + V G G ++EI+ LR++ R +G+L
Sbjct: 191 DLTSEGMDQNDVGLELLEFIHLHKTAVLLEAATVLGAIFGGGTNEEIERLRKFARCIGLL 250
Query: 252 YQVVDDILEAKAQTPRDEEKKKKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELD 304
+QVVDDIL+ T EE K GK +A G+EK+ + AE+L + A+E+L
Sbjct: 251 FQVVDDILDV---TKSSEELGKTAGKDLIADKLTYPKLMGLEKSKDFAEKLLSDAQEQLH 307
Query: 305 RFKKYGDNVLPLYSFIDYAADRE 327
F + V PL + +Y R+
Sbjct: 308 GFDS--NKVKPLLALANYIGKRQ 328
>gi|148241850|ref|YP_001227007.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RCC307]
gi|147850160|emb|CAK27654.1| Geranylgeranyl pyrophosphate synthase [Synechococcus sp. RCC307]
Length = 300
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 171/300 (57%), Gaps = 21/300 (7%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
FD Y +++Q L+ ++ + PE + E+MRYS+LA G KR P++C+A+CEL G
Sbjct: 9 FDFSHYLEAGRLKVEQALDSSLGPERPESLREAMRYSLLAGG-KRLRPILCLASCELAGG 67
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+ A PTA ALEM+H SLIHDDLP MD+D RRG+P+NH VYG AILAGDAL
Sbjct: 68 DASLALPTATALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDATAILAGDALLTRA 127
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP-----NLVEFVQEK 214
F+ + +P VP R+L+VI E++ A G+ G+ GQ +DL E + +E++
Sbjct: 128 FEMVALRSPD--VPAERLLKVIGELSLAAGAPGLVGGQIVDLASEGVEVDLDTLEYIHLH 185
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKK 274
K G + + S + G +AGADD +++LR Y RA+G+ +Q++DDIL+ A + E K
Sbjct: 186 KTGALLQASVLSGALIAGADDTLLEALRTYSRAIGLAFQIIDDILDVTASS---EVLGKT 242
Query: 275 KGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
GK +Y G+E++ AE L KE + D PL + Y R+
Sbjct: 243 AGKDLTADKTTYPKLLGLEESKARAESL---VKEACGVLNPWSDKAQPLLALAGYITSRD 299
>gi|428780839|ref|YP_007172625.1| geranylgeranyl pyrophosphate synthase [Dactylococcopsis salina PCC
8305]
gi|428695118|gb|AFZ51268.1| geranylgeranyl pyrophosphate synthase [Dactylococcopsis salina PCC
8305]
Length = 305
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/306 (39%), Positives = 175/306 (57%), Gaps = 22/306 (7%)
Query: 35 LRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAAC 94
+++ FDL++Y I++ L++++ + P IYE+MRYS+LA G KR P++C+A C
Sbjct: 8 VQNLTFDLESYLQARKAIIEKALDQSLPIAEPPVIYEAMRYSLLAGG-KRLRPILCLATC 66
Query: 95 ELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDA 154
EL G A PTACALEM+H SLIHDDLP MD+D RRGQ +NH YG DIAILAGD
Sbjct: 67 ELVGGTIEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGQLTNHKKYGEDIAILAGDG 126
Query: 155 LFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----V 208
L F+++ + T V VLRVIA++ VG+TG+ GQ LDL EG P++ +
Sbjct: 127 LLAYAFEYVAAQTQG--VNPSSVLRVIAKLGHTVGATGLVGGQVLDLASEGNPDISLETL 184
Query: 209 EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRD 268
++ K G + E V G L A ++ + +L RY +G+ +Q++DDIL+ T
Sbjct: 185 NYIHTHKTGALLEACVVTGAILGEASEETLAALSRYAYNIGLAFQIIDDILDI---TATQ 241
Query: 269 EEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFID 321
EE K GK +Y G+E + A+EL A E+ YGD +PL +
Sbjct: 242 EELGKTAGKDVEADKATYPRLLGLEASKAKADELIEAACAEM---SPYGDAGVPLKAIAQ 298
Query: 322 YAADRE 327
A+R+
Sbjct: 299 LIANRK 304
>gi|254423009|ref|ZP_05036727.1| polyprenyl synthetase superfamily [Synechococcus sp. PCC 7335]
gi|196190498|gb|EDX85462.1| polyprenyl synthetase superfamily [Synechococcus sp. PCC 7335]
Length = 307
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 128/303 (42%), Positives = 183/303 (60%), Gaps = 21/303 (6%)
Query: 38 TQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
+ FDLK+Y + +++ ++ A+ V YPEQIYE+MRYS+LA G KR P++C+A CE+
Sbjct: 10 STFDLKSYLSDRSCQVEAAIDAALPVVYPEQIYEAMRYSLLAGG-KRLRPILCLATCEML 68
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G + A PTACALEMVH SLIHDDLP MDDD RRG+ +NH VYG +A+LAGDAL
Sbjct: 69 GASANIAMPTACALEMVHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEGVAVLAGDALLT 128
Query: 158 LGFQHIVSHTPPHL-VPEPR-VLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVE-----F 210
F+HI + TP +P+ +L+V+A++ RAVG+ G+ GQ +DL E LV+ F
Sbjct: 129 YAFEHIATQTPQGSDGADPQHILKVVAQLGRAVGAEGLVGGQVVDLASEGTLVDEETLTF 188
Query: 211 VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEE 270
+ K + E S G LAGA + + LRRY + +G+ +Q+VDD+L+ + TP E
Sbjct: 189 IHMHKTAALLEVSVTSGAMLAGASEAVVDRLRRYAQRIGLAFQIVDDVLDITS-TP--ET 245
Query: 271 KKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYA 323
K GK +Y + +G+E++ AE+L A A EL F G+ PL + +
Sbjct: 246 LGKSIGKDIAAQKATYPSLWGLEESQRKAEQLVADAISELSEF---GEGAQPLVAIAQFI 302
Query: 324 ADR 326
R
Sbjct: 303 TAR 305
>gi|167037514|ref|YP_001665092.1| polyprenyl synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|320115928|ref|YP_004186087.1| polyprenyl synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|326390206|ref|ZP_08211767.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200]
gi|392941055|ref|ZP_10306699.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
siderophilus SR4]
gi|166856348|gb|ABY94756.1| Polyprenyl synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319929019|gb|ADV79704.1| Polyprenyl synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|325993854|gb|EGD52285.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200]
gi|392292805|gb|EIW01249.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
siderophilus SR4]
Length = 294
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 113/264 (42%), Positives = 163/264 (61%), Gaps = 10/264 (3%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
PE IYE+MRYSV A G KR PV+C+++CEL G + A P ACA+E++H SLIHDDLP
Sbjct: 27 PEIIYEAMRYSVFA-GGKRLRPVLCLSSCELLGGDIKKALPVACAIELIHTYSLIHDDLP 85
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
MD+D RRG+P+NH VYG IAILAGD L LG++ +V H H R+L+ EIA
Sbjct: 86 AMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLGYEVLVRHALEHPEDYERILKATNEIA 145
Query: 186 RAVGSTGMAAGQFLDL-----EGEPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
A G G+ GQ +D+ E ++F+ E K G + E S G ++AGA ++EI +
Sbjct: 146 TASGCKGIIGGQVVDILSQNTELTYEELKFMHEHKTGALIEASVCAGAYIAGATEEEIHA 205
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEK---KKKKGK-SYVAFYGVEKAMEVAEELR 296
LR Y R +G +Q+ DDIL+ + + +K K+KGK ++V +G+EK+ E+ EL
Sbjct: 206 LREYARLIGFAFQIKDDILDVIGEEEKLGKKVGSDKEKGKFTFVNIFGLEKSQEMVVELT 265
Query: 297 AKAKEELDRFKKYGDNVLPLYSFI 320
A + LDRF + + + L +++
Sbjct: 266 QNAIKILDRFGEKAEFLKELSNYL 289
>gi|87303385|ref|ZP_01086173.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 5701]
gi|87282033|gb|EAQ73995.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 5701]
Length = 300
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 120/303 (39%), Positives = 175/303 (57%), Gaps = 21/303 (6%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
ST+FD Y + +++ LE A+ + PE + E+MRYS+LA G KR P++C+AACEL
Sbjct: 6 STEFDFAAYLESARGQVELALEAALGPERPESLREAMRYSLLAGG-KRLRPILCLAACEL 64
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
G A PTA ALEM+H SLIHDDLP MD+D RRG+P+NH VYG AILAGDAL
Sbjct: 65 AGGEVALALPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAQAILAGDALL 124
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFV 211
F+ + +P VP R+L+V+ E++ A G+ G+ GQ +DLE E V E++
Sbjct: 125 TRAFEMVALRSPG--VPAERLLQVVGELSLAAGAPGLVGGQVVDLESEGKDVDLATLEYI 182
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
K G + + + G +AGA + +Q LR Y R +G+ +Q++DDIL+ A + E
Sbjct: 183 HLHKTGALLQACVLTGAMIAGAPEPLLQGLRTYSRGIGLAFQIIDDILDVTASS---EVL 239
Query: 272 KKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAA 324
K GK +Y G+E++ + A+ L A+AK L ++ + PL + DY
Sbjct: 240 GKTAGKDLTADKTTYPKLLGLEESRQRADALVAEAKAALQPWQA---SAQPLLALADYIT 296
Query: 325 DRE 327
R+
Sbjct: 297 SRD 299
>gi|41059107|gb|AAR99082.1| geranylgeranyl pyrophosphate synthase [Plectranthus barbatus]
Length = 359
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 125/308 (40%), Positives = 181/308 (58%), Gaps = 21/308 (6%)
Query: 32 ASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCV 91
+++ FD + Y +++ L+ A+ + P I+ESMRYS+LA G KR P++C+
Sbjct: 58 SNKFSLNNFDFEAYMKEKAERVNRALDAAVAQREPRWIHESMRYSLLAGG-KRVRPLLCI 116
Query: 92 AACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILA 151
A+CEL G + A P ACA EM+H SLIHDDLPCMD+D RRG+P+NH VYG ++A+LA
Sbjct: 117 ASCELVGGDERTAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGENVAVLA 176
Query: 152 GDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP------ 205
GDAL L F+H+ + T + PE RV+R + E R +GS G+ GQ +D+ E
Sbjct: 177 GDALLALAFEHVAAAT-EGVAPE-RVVRAVVEFGRYIGSEGLVGGQVVDIHSEGLAEVGV 234
Query: 206 NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT 265
+E++ K + E + V G L GADD+ ++ LR++ R +G+L+QVVDDIL+ T
Sbjct: 235 EQLEYIHLHKTAALLEAAVVMGAILGGADDEAVEKLRKFARCIGLLFQVVDDILDV---T 291
Query: 266 PRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYS 318
EE K GK +Y G+EK+ E AE+LRA A ++L F PL +
Sbjct: 292 KSSEELGKTAGKDLLTDKTTYPKLLGLEKSREFAEKLRADACDQLVGFDPA--RAAPLIA 349
Query: 319 FIDYAADR 326
+Y A R
Sbjct: 350 LANYIAYR 357
>gi|318040269|ref|ZP_07972225.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CB0101]
Length = 310
Score = 210 bits (534), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 121/312 (38%), Positives = 179/312 (57%), Gaps = 21/312 (6%)
Query: 28 PVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPP 87
P++AA+ + T FD Y +++ L+ ++ + PE + ESMRYS+LA G KR P
Sbjct: 7 PMTAAATM--TSFDFAAYLEASRLKVEAALDGSLGPERPESLRESMRYSLLAGG-KRLRP 63
Query: 88 VMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDI 147
++C+AACEL G + A PTA ALEM+H SLIHDDLP MD+D RRG P+NH VYG
Sbjct: 64 ILCLAACELAGGDSAQAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGMPTNHKVYGEAN 123
Query: 148 AILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL 207
AILAGDAL F+ + +P VP ++L+V+ E++ A G+ G+ GQ +DLE E
Sbjct: 124 AILAGDALLTRAFEMVALRSPG--VPAEQLLKVVGELSLASGAPGLVGGQVVDLECEGKN 181
Query: 208 V-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAK 262
V E++ K G + + G +AGA D +++LR Y R +G+ +Q++DDIL+
Sbjct: 182 VDLETLEYIHLHKTGALLRACVLTGALIAGAPDALLEALRTYARGIGLAFQIIDDILDVT 241
Query: 263 AQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLP 315
A + E K GK +Y G+E++ + A+ L A+AK L+ + G P
Sbjct: 242 ASS---EVLGKTAGKDLTADKTTYPKLLGLEESRKRADALVAEAKAALEPWSA-GGKAAP 297
Query: 316 LYSFIDYAADRE 327
L + DY R+
Sbjct: 298 LLALADYITSRD 309
>gi|148239905|ref|YP_001225292.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7803]
gi|147848444|emb|CAK23995.1| Geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7803]
Length = 312
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/301 (39%), Positives = 172/301 (57%), Gaps = 21/301 (6%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
+FD +Y ++Q+L+ A+ + PE + ESMRYS+LA G KR P++C+AACEL G
Sbjct: 20 EFDFSSYLAKTRELVEQSLDAALGPERPESLRESMRYSLLAGG-KRLRPILCLAACELVG 78
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
+ A PTA ALEM+H SLIHDDLP MD+D RRG+P+NH VYG +AILAGDAL
Sbjct: 79 GDASLAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAGDALLSR 138
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQE 213
F+ + + VP R+L+V+AE++ G+ G+ GQ +DLE E V E++
Sbjct: 139 AFEMVAVRSEG--VPPERLLKVVAELSLVSGAPGLVGGQVVDLESEGREVDLETLEYIHL 196
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K + V G + GAD ++ ++R Y +G+ +Q+VDDIL+ A + + K
Sbjct: 197 HKTAALLRACVVTGALIGGADASQVDAMRTYANGIGLAFQIVDDILDVTASS---DVLGK 253
Query: 274 KKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK +A G+E + A EL A+AK L+ +K D PL + DY A R
Sbjct: 254 TAGKDLIADKTTYPKLLGLEPSRARALELVAQAKAVLEPWK---DKAQPLLALADYVASR 310
Query: 327 E 327
+
Sbjct: 311 D 311
>gi|88808953|ref|ZP_01124462.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7805]
gi|88786895|gb|EAR18053.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7805]
Length = 315
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/300 (39%), Positives = 169/300 (56%), Gaps = 21/300 (7%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
FD Y ++ L+ A+ + PE + ESMRYS+LA G KR P++C+AACEL G
Sbjct: 24 FDFSAYLAKTRNLVEGALDAALGPERPESLRESMRYSLLAGG-KRLRPILCLAACELVGG 82
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+ A PTA ALEM+H SLIHDDLP MD+D RRG+P+NH VYG +AILAGDAL
Sbjct: 83 DASLAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAGDALLSRA 142
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEK 214
F+ + +P VP R+L+V+AE+A G+ G+ GQ +DLE E V E++
Sbjct: 143 FEMVSLRSPG--VPPERLLKVVAELALVSGAPGLVGGQVVDLESEGREVDLETLEYIHLH 200
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKK 274
K + V G + GAD ++++++R Y +G+ +Q+VDDIL+ A + E K
Sbjct: 201 KTAALLRACVVTGALIGGADANQVEAMRTYANGIGLAFQIVDDILDVTASS---EVLGKT 257
Query: 275 KGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
GK +A G+E + A EL A+AK L+ + PL + DY A R+
Sbjct: 258 AGKDLIADKTTYPKLLGLEPSRARALELVAQAKSALE---PWTSKAQPLLALADYVASRD 314
>gi|345017599|ref|YP_004819952.1| polyprenyl synthetase [Thermoanaerobacter wiegelii Rt8.B1]
gi|344032942|gb|AEM78668.1| Polyprenyl synthetase [Thermoanaerobacter wiegelii Rt8.B1]
Length = 294
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/264 (42%), Positives = 162/264 (61%), Gaps = 10/264 (3%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
PE IYE+MRYSV A G KR PV+C+++CEL G + A P ACA+E++H SLIHDDLP
Sbjct: 27 PEIIYEAMRYSVFA-GGKRLRPVLCLSSCELLGGDIKKALPVACAIELIHTYSLIHDDLP 85
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
MD+D RRG+P+NH VYG IAILAGD L LG++ +V H H R+L+ EIA
Sbjct: 86 AMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLGYEVLVRHALEHPEDYERILKATNEIA 145
Query: 186 RAVGSTGMAAGQFLDL-----EGEPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
A G G+ GQ +D+ E ++F+ E K G + E S G ++A A ++EI +
Sbjct: 146 TASGCKGIIGGQVVDILSQNTELTYEELKFMHEHKTGALIEASVCAGAYIASATEEEIHA 205
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEK---KKKKGK-SYVAFYGVEKAMEVAEELR 296
LR Y R +G +Q+ DDIL+ + + +K K+KGK ++V +G+EK+ E+ EL
Sbjct: 206 LREYARLIGFAFQIKDDILDVIGEEEKLGKKVGSDKEKGKFTFVNIFGLEKSQEMVVELT 265
Query: 297 AKAKEELDRFKKYGDNVLPLYSFI 320
A + LDRF + + + L +++
Sbjct: 266 QNAIKILDRFGEKAEFLKELSNYL 289
>gi|33863380|ref|NP_894940.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9313]
gi|33640829|emb|CAE21284.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9313]
Length = 306
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 114/283 (40%), Positives = 167/283 (59%), Gaps = 18/283 (6%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
ST FD Y +++ L+ ++ + PEQ+ E+MRYS+LA G KR P++C+AACEL
Sbjct: 12 STFFDFPAYLAAAKASVEEALDDSLGPERPEQLREAMRYSLLAGG-KRLRPILCLAACEL 70
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
G A PTA ALEM+H SLIHDDLP MD+D RRG+P+NH VYG +AILAGDAL
Sbjct: 71 AGGEPAEALPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGDALL 130
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFV 211
F+ + +P VP R+L+V+ E++ G+ G+ GQ +DLE E V EF+
Sbjct: 131 TRSFEMVALRSPG--VPPERLLKVVGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEFI 188
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
K G + +CG + GA+DD I +LR Y R +G+ +Q++DDIL+ A + +
Sbjct: 189 HLHKTGALLSACVICGALIGGAEDDLIDALRIYARGIGLAFQIIDDILDVTASS---DVL 245
Query: 272 KKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFK 307
K GK +Y G++++ AE L ++AK L+ ++
Sbjct: 246 GKTAGKDLLADKTTYPKLLGLDESRRRAELLVSEAKAALEPWQ 288
>gi|223997332|ref|XP_002288339.1| geranylgeranyl pyrophosphate synthetase [Thalassiosira pseudonana
CCMP1335]
gi|220975447|gb|EED93775.1| geranylgeranyl pyrophosphate synthetase [Thalassiosira pseudonana
CCMP1335]
Length = 339
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 120/323 (37%), Positives = 184/323 (56%), Gaps = 28/323 (8%)
Query: 20 FPVRCSSLPVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPE--QIYESMRYSV 77
+P ++L V++A T F L Y + I I+ LE ++ + P+ +I ESM YS+
Sbjct: 29 YPTTTTALNVASAE----TSFSLDEYLASKIGPIESALEASVKSRIPQTDKICESMAYSL 84
Query: 78 LAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQP 137
+A G KR PV+C+AACE+FG ++ A PTA ALEM+H SLIHDDLP MD+D RRG+P
Sbjct: 85 MAGG-KRIRPVLCIAACEMFGGSQDVAMPTAVALEMIHTMSLIHDDLPSMDNDDLRRGKP 143
Query: 138 SNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQ 197
+NH V+G D+AILAGD+L F+H+ T V +++ VIA + ++VG+ G+A GQ
Sbjct: 144 TNHVVFGEDVAILAGDSLLSTSFEHVARETKG--VSAEKIVDVIARLGKSVGAEGLAGGQ 201
Query: 198 FLDLEGEP------NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVL 251
+DLE E + ++++ K + + + G L GA +E+ + + +G+
Sbjct: 202 VMDLECEAKPGTTLDDLKWIHIHKTATLLQVAVASGAVLGGATPEEVAACELFAMNIGLA 261
Query: 252 YQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELD 304
+QV DDIL+ A + E+ K GK +Y G+E++ A +L +AKE L
Sbjct: 262 FQVADDILDVTASS---EDLGKTAGKDEATDKTTYPKLLGLEESKAYARQLIDEAKESLA 318
Query: 305 RFKKYGDNVLPLYSFIDYAADRE 327
F GD PL + D+ DR+
Sbjct: 319 PF---GDRAAPLLAIADFIIDRK 338
>gi|289578292|ref|YP_003476919.1| Geranyltranstransferase [Thermoanaerobacter italicus Ab9]
gi|289528005|gb|ADD02357.1| Geranyltranstransferase [Thermoanaerobacter italicus Ab9]
Length = 294
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 114/284 (40%), Positives = 173/284 (60%), Gaps = 14/284 (4%)
Query: 53 IDQNLEKAITVK-YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACAL 111
I++ L + + V+ P+ IYE+M+YSV A G KR PV+C+++CELF + A P ACA+
Sbjct: 13 IEKELHRILEVEENPQIIYEAMKYSVFA-GGKRLRPVLCLSSCELFEGDIKKALPVACAI 71
Query: 112 EMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHL 171
E++H SLIHDDLP MD+D RRG+P+NH VYG IAILAGD L L F+ ++ H +
Sbjct: 72 ELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLAFEVLIRHALENP 131
Query: 172 VPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVC 226
R+L+ EIARA G GM GQ +D+ + ++F+ E K G + E S
Sbjct: 132 HDYQRILKATNEIARASGCKGMIGGQVVDILSQNTKLTYEELKFMHEHKTGALIEASVCA 191
Query: 227 GGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK---KKKKGK-SYVAF 282
G ++AGA +++I +LR Y +G+ +Q+ DDIL+ + + +K ++KGK ++V
Sbjct: 192 GAYIAGAIEEDIHALREYASLIGLAFQIKDDILDVIGEEEKLGKKVGSDREKGKVTFVNI 251
Query: 283 YGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
+G++K+ ++ EL KA E LDRF G+ L L +Y +R
Sbjct: 252 FGLKKSQQMVVELTQKAIEILDRF---GEKALFLKELSNYLIER 292
>gi|433654909|ref|YP_007298617.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293098|gb|AGB18920.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 293
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 172/288 (59%), Gaps = 15/288 (5%)
Query: 50 ITEIDQNLEKAITVK-YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTA 108
I I+ L K + + PE +Y++MRYSV A G KR PV+C+++CEL G +R A P A
Sbjct: 10 IEYINNGLNKLLDIDDKPEILYDAMRYSVFA-GGKRLRPVLCISSCELVGGDRDDALPVA 68
Query: 109 CALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTP 168
CA+E +H SLIHDDLP MD+D RRG+P+NH VYG +AILAGDAL GF+ ++ H
Sbjct: 69 CAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEALAILAGDALLNYGFEVLIHHAL 128
Query: 169 PHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE-PNLVE----FVQEKKFGEMSECS 223
+ +LR I EIA A G GM GQ +DL E N+ E F+ + K G + + S
Sbjct: 129 DSANCQ-NILRAIEEIAHAAGCHGMIGGQVVDLLSENKNITEEELKFMHDHKTGALIKAS 187
Query: 224 AVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEA---KAQTPRDEEKKKKKGKS-Y 279
V G + GADD+ I+ L Y +G+ +Q+ DDIL+ +++ ++ + + GKS +
Sbjct: 188 VVAGAIMGGADDETIKKLSDYAEYIGLAFQIKDDILDVLGDESKLGKNVKSDSENGKSTF 247
Query: 280 VAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
V+ +G+++++ + +EL A A LD F G+ L S Y ADR+
Sbjct: 248 VSVFGLQRSISLVKELTASAIRILDDF---GEKSEFLKSLTKYMADRD 292
>gi|428177866|gb|EKX46744.1| hypothetical protein GUITHDRAFT_157722 [Guillardia theta CCMP2712]
Length = 303
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 180/308 (58%), Gaps = 30/308 (9%)
Query: 41 DLKTYWTTLITEIDQNLEKAITV---KYP-----EQIYESMRYSVLAKGTKRAPPVMCVA 92
D+K Y+ + + +++ L++++ V +P E ++ESMRYS++A G KR P++ +A
Sbjct: 4 DIKQYFESQLPKVEAALDESMNVLKRDWPYDSKAETVHESMRYSLMA-GGKRIRPILTLA 62
Query: 93 ACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAG 152
ACE+ G A PTA A EM+H SLIHDDLPCMD+D RRG+P+NH V+G DIA+LAG
Sbjct: 63 ACEMMGGTEEMAMPTALAAEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGDDIAVLAG 122
Query: 153 DALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN------ 206
D L F++I +T + PE RVL VIA + VG+ G+ GQ +D++ E
Sbjct: 123 DGLLSYSFEYIARYTKG-VAPE-RVLDVIARCGKCVGALGLVGGQVVDIQSEGKKDVTIE 180
Query: 207 LVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP 266
++++ E K + E V GG L GA++++IQ L ++ +G+ +Q++DDIL+ T
Sbjct: 181 TLQWIHEHKTAALLEFCVVGGGILGGANEEQIQRLSKFAMNIGLSFQIIDDILDV---TQ 237
Query: 267 RDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSF 319
K GK +Y G+EK+ E AE L A+AK D+ K +GD PL +
Sbjct: 238 DSATLGKTAGKDLLVDKATYPKLMGLEKSKERAEALIAEAK---DQLKPWGDKAAPLMAL 294
Query: 320 IDYAADRE 327
D+ R+
Sbjct: 295 ADFITARK 302
>gi|434386605|ref|YP_007097216.1| geranylgeranyl pyrophosphate synthase [Chamaesiphon minutus PCC
6605]
gi|428017595|gb|AFY93689.1| geranylgeranyl pyrophosphate synthase [Chamaesiphon minutus PCC
6605]
Length = 305
Score = 207 bits (526), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 181/301 (60%), Gaps = 22/301 (7%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
FDL Y T +I+ L+ AI YP+ IY++MRYS+LA G KR P++C+A+CEL G
Sbjct: 13 FDLVAYLTERQPQIEAALDAAIRPGYPDTIYDAMRYSLLAGG-KRLRPMLCLASCELIGG 71
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+ + P ACALEMVH SLIHDDLP MDDD RRG+ +NH VYG DIAILAGD L
Sbjct: 72 SLDSVMPMACALEMVHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEDIAILAGDGLLAYS 131
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQE 213
F++I + T V RVL+ IA +A+AVG+ G+ GQ +DL EG+P++ + ++
Sbjct: 132 FEYIATQTQG--VSADRVLKAIAHLAKAVGANGLVGGQVVDLESEGKPDISVETLTYIHN 189
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K G + + VCG LAGA + +++ L ++ +G+ +Q++DDIL+ T E K
Sbjct: 190 HKTGALLKACVVCGAILAGATEAQLEKLSKFAHNIGLAFQIIDDILDI---TATQAELGK 246
Query: 274 KKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK +Y +G+E++ A++L A+AK L F GD PL + DY DR
Sbjct: 247 TAGKDIQAQKATYPKLWGLEESKRQADKLVAEAKAILAEF---GDRARPLQALADYITDR 303
Query: 327 E 327
+
Sbjct: 304 K 304
>gi|297544572|ref|YP_003676874.1| polyprenyl synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296842347|gb|ADH60863.1| Polyprenyl synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 294
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 114/284 (40%), Positives = 173/284 (60%), Gaps = 14/284 (4%)
Query: 53 IDQNLEKAITVK-YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACAL 111
I++ L + + V+ P+ IYE+M+YSV A G KR PV+C+++CELF + A P ACA+
Sbjct: 13 IEKELHRILEVEENPQIIYEAMKYSVFA-GGKRLRPVLCLSSCELFEGDIKKALPVACAI 71
Query: 112 EMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHL 171
E++H SLIHDDLP MD+D RRG+P+NH VYG IAILAGD L L F+ ++ H +
Sbjct: 72 ELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLAFEVLIRHALENP 131
Query: 172 VPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVC 226
R+L+ EIARA G GM GQ +D+ + ++F+ E K G + E S
Sbjct: 132 HDYQRILKATDEIARASGCKGMIGGQVVDILSQNTKLTYEELKFMHEHKTGALIEASVCA 191
Query: 227 GGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK---KKKKGK-SYVAF 282
G ++AGA +++I +LR Y +G+ +Q+ DDIL+ + + +K ++KGK ++V
Sbjct: 192 GAYIAGAIEEDIHALREYASLIGLAFQIKDDILDVIGEEEKLGKKVGSDREKGKVTFVNI 251
Query: 283 YGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
+G++K+ ++ EL KA E LDRF G+ L L +Y +R
Sbjct: 252 FGLKKSQQMVVELTQKAIEILDRF---GEKALFLKELSNYLIER 292
>gi|113953464|ref|YP_730204.1| geranylgeranyl diphosphate synthase [Synechococcus sp. CC9311]
gi|113880815|gb|ABI45773.1| geranylgeranyl diphosphate synthase [Synechococcus sp. CC9311]
Length = 312
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/311 (37%), Positives = 177/311 (56%), Gaps = 22/311 (7%)
Query: 29 VSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPV 88
V ++ +L ST FD Y ++ L+ ++ + PE + ++MRYS+LA G KR P+
Sbjct: 11 VPSSGELLST-FDFANYLKLSRDRVEIALDASMGPERPESLRDAMRYSLLAGG-KRLRPI 68
Query: 89 MCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIA 148
+C+AACEL G + A PTA ALEM+H SLIHDDLP MD+D RRG+P+NH VYG +A
Sbjct: 69 LCLAACELVGGSSELAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAMA 128
Query: 149 ILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV 208
ILAGDA+ F+ + + VP R+LRV+ E+A G+ G+ GQ +DLE E V
Sbjct: 129 ILAGDAMLSRAFEMVAVRSAN--VPADRLLRVVGELALVSGAPGLVGGQVVDLESEGQAV 186
Query: 209 -----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA 263
E++ K + V G + GA+DD++Q++R Y +G+ +Q++DDIL+ A
Sbjct: 187 DLETLEYIHLHKTAALLRACVVTGALIGGANDDQLQAMRTYANGIGLAFQIIDDILDVTA 246
Query: 264 QTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPL 316
+ E K GK +Y G++ + E A +L ++K L+ ++ D PL
Sbjct: 247 SS---EVLGKTAGKDLLADKTTYPKLLGLDASREKALQLVRESKAALEPWR---DKAAPL 300
Query: 317 YSFIDYAADRE 327
+ DY A R+
Sbjct: 301 LALADYVASRD 311
>gi|313118274|sp|Q9LRR0.2|GGPP8_ARATH RecName: Full=Putative geranylgeranyl pyrophosphate synthase 8,
chloroplastic; Short=GGPP synthase 8; Short=GGPS8;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 8;
AltName: Full=Dimethylallyltranstransferase 8; AltName:
Full=Farnesyl diphosphate synthase 8; AltName:
Full=Farnesyltranstransferase 8; AltName:
Full=Geranyltranstransferase 8; Flags: Precursor
Length = 361
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 126/316 (39%), Positives = 187/316 (59%), Gaps = 23/316 (7%)
Query: 27 LPVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAIT-VKYPEQIYESMRYSVLAKGTKRA 85
+P S ++ FD K Y ++ L+ +I ++ P + E++RYS+LA G KR
Sbjct: 51 IPPQGKSNDHNSAFDFKLYMIRKAESVNAALDVSIVPLREPLTVQEAVRYSLLAGG-KRV 109
Query: 86 PPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGV 145
P++C+A CEL G + A ACA+EM+H +SLIHDDLPCMD+ RRG+P+NH V+G
Sbjct: 110 RPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVFGE 169
Query: 146 DIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE- 204
D+A+LAGDAL L F+H+ + LV R++R + E+ARA+G+ G+ AGQ +DL E
Sbjct: 170 DMAVLAGDALLALAFEHM-TVVSSGLVASERMIRAVVELARAIGTKGLVAGQVVDLSSER 228
Query: 205 --PNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDD 257
P+ V EF+ K + E +AV G + G ++EI+ LR+Y R +G+L+QVVDD
Sbjct: 229 LNPHDVGLERLEFIHLHKTAALLEAAAVIGAIMGGGTEEEIEKLRKYARCIGLLFQVVDD 288
Query: 258 ILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYG 310
IL+ T EE K GK +Y G+E++ EVAE+L +A+E+L F+
Sbjct: 289 ILDVTKST---EELGKTAGKDVMAGKLTYPRLIGLERSREVAEKLSREAEEQLLGFES-- 343
Query: 311 DNVLPLYSFIDYAADR 326
D PL + Y + R
Sbjct: 344 DKAAPLVALASYISCR 359
>gi|317970425|ref|ZP_07971815.1| polyprenyl synthetase [Synechococcus sp. CB0205]
Length = 312
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/301 (38%), Positives = 173/301 (57%), Gaps = 19/301 (6%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
FD Y + +++Q L+ ++ + PE + E+MRYS+LA G KR P++C+AACEL G
Sbjct: 18 HFDFAAYLESSRQQVEQALDGSLGPERPESLREAMRYSLLAGG-KRLRPILCLAACELAG 76
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
+ A PTA ALEM+H SLIHDDLP MD+D RRG P+NH VYG AILAGDAL
Sbjct: 77 GDAALAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGMPTNHKVYGEANAILAGDALLTR 136
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQE 213
F+ + +P VP ++++V+ E++ A G+ G+ GQ +DLE E V E++
Sbjct: 137 AFEMVALRSPG--VPAEQLIKVVGELSLASGAPGLVGGQVVDLECEGKDVDLETLEYIHL 194
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K G + + G +AGA + + +L Y R +G+ +Q++DDIL+ A + E K
Sbjct: 195 HKTGALLRSCVLTGALIAGASEALLAALTTYARGIGLAFQIIDDILDVTASS---EVLGK 251
Query: 274 KKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK +Y G+E++ + A+ L A+AK+ L+ F G + PL + DY R
Sbjct: 252 TAGKDLTADKTTYPKLLGLEESRQRADALVAEAKQALEPFNSNG-SAAPLLALADYITSR 310
Query: 327 E 327
+
Sbjct: 311 D 311
>gi|167040176|ref|YP_001663161.1| polyprenyl synthetase [Thermoanaerobacter sp. X514]
gi|300914259|ref|ZP_07131575.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561]
gi|307724505|ref|YP_003904256.1| polyprenyl synthetase [Thermoanaerobacter sp. X513]
gi|166854416|gb|ABY92825.1| Polyprenyl synthetase [Thermoanaerobacter sp. X514]
gi|300889194|gb|EFK84340.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561]
gi|307581566|gb|ADN54965.1| Polyprenyl synthetase [Thermoanaerobacter sp. X513]
Length = 294
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 111/270 (41%), Positives = 162/270 (60%), Gaps = 13/270 (4%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
PE IYE+MRYSV A G KR PV+C+++CEL G + A P ACA+E++H SLIHDDLP
Sbjct: 27 PEIIYEAMRYSVFA-GGKRLRPVLCLSSCELLGGDIKKALPVACAIELIHTYSLIHDDLP 85
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
MD+D RRG+P+NH VYG IAILAGD L LG++ +V H H R+L+ EIA
Sbjct: 86 AMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLGYEVLVRHALEHPEDYERILKATNEIA 145
Query: 186 RAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
A G G+ GQ +D+ + ++F+ E K + E S G ++AGA ++++ +
Sbjct: 146 TASGCKGIIGGQVVDILSQNTKLTYEELKFIHEHKTAALIEASVCAGAYIAGATEEDVHA 205
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEK---KKKKGK-SYVAFYGVEKAMEVAEELR 296
LR Y R +G +Q+ DDIL+ + + +K ++KGK ++V + +EK+ E+ EL
Sbjct: 206 LREYARLIGFAFQIKDDILDVIGEEEKLGKKVGSDREKGKFTFVNIFELEKSQEMVVELT 265
Query: 297 AKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
A + LDRF G+ L L +Y +R
Sbjct: 266 QNAVKILDRF---GEKALFLKELSNYLIER 292
>gi|323455416|gb|EGB11284.1| hypothetical protein AURANDRAFT_52464 [Aureococcus anophagefferens]
Length = 352
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/303 (38%), Positives = 171/303 (56%), Gaps = 22/303 (7%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQ--IYESMRYSVLAKGTKRAPPVMCVAACELF 97
FDLK Y+ + +++ L++++T PE I ESMRYS+LA G KR PVMC+AACE+F
Sbjct: 56 FDLKAYFAQKVAAVEKALDESLTCTTPETKIIVESMRYSLLAGG-KRVRPVMCIAACEMF 114
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G A PTA A+EM+H SLIHDDLP MD+D RRG P+NH +YG D+AILAGDAL
Sbjct: 115 GGTEAMAMPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGMPTNHVIYGDDVAILAGDALLS 174
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL------VEFV 211
F+H + +P R++ I + AVG+ G+A GQ +DLE E + ++
Sbjct: 175 TSFEHCAVGSTAEGIPAERIVETIRRLGEAVGAVGLAGGQVMDLECEAKSGVSLEELTWI 234
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP----- 266
K ++ E S G LAGA D+++ Y +G+ +QV DDIL+ A +
Sbjct: 235 HTHKTAKLLEVSVAAGAVLAGAAKDDVRQCETYANDIGIAFQVADDILDVTATSEMLGKT 294
Query: 267 --RDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAA 324
+DE+ K +Y G++ A A+ L ++A +D YG+ +PL + Y
Sbjct: 295 AGKDEDTDK---TTYPKLMGLDGARAEADRLYSEA---IDSLAPYGEKAVPLIAIAKYIV 348
Query: 325 DRE 327
+R+
Sbjct: 349 ERQ 351
>gi|72382520|ref|YP_291875.1| polyprenyl synthetase [Prochlorococcus marinus str. NATL2A]
gi|72002370|gb|AAZ58172.1| farnesyl-diphosphate synthase [Prochlorococcus marinus str. NATL2A]
Length = 299
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/301 (38%), Positives = 171/301 (56%), Gaps = 21/301 (6%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
FD Y T ++ L+ ++ + PE++ ESMRYS+LA G KR P++C+AACEL G
Sbjct: 7 SFDFAEYLEKARTRVEDALDASLGPEKPEKLRESMRYSLLA-GGKRLRPILCLAACELAG 65
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
A PTA ALEM+H SLIHDDLP MD+D RRG+P+NH VYG +AILAGDAL
Sbjct: 66 GELEKALPTAVALEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGDAVAILAGDALLTR 125
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQE 213
F+ + T +P R+L++I E++ A G+ G+ GQ +DL+ E V E++
Sbjct: 126 AFEMVSIRTEG--IPSERLLKIIGELSLAAGAPGLVGGQVVDLDCEGKEVDLETLEYIHL 183
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K G + + CG + GAD+ +++L Y R +G+ +Q++DDIL+ A + E K
Sbjct: 184 HKTGALLKACVTCGALIGGADEKLLEALSIYARGIGLAFQIIDDILDVTASS---EVLGK 240
Query: 274 KKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK +A G++++ A+ L AKAK LD + + PL + DY R
Sbjct: 241 TAGKDLIADKTTYPKLLGLDESRRRADLLVAKAKSALD---PWPEKSKPLLALADYITSR 297
Query: 327 E 327
+
Sbjct: 298 D 298
>gi|352093628|ref|ZP_08954799.1| Polyprenyl synthetase [Synechococcus sp. WH 8016]
gi|351679968|gb|EHA63100.1| Polyprenyl synthetase [Synechococcus sp. WH 8016]
Length = 312
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 114/302 (37%), Positives = 169/302 (55%), Gaps = 21/302 (6%)
Query: 38 TQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
+ FD Y ++ L+ ++ + PE + ++MRYS+LA G KR P++C+AACEL
Sbjct: 19 SSFDFAAYLKLSRDRVEIALDASMGPERPESLRDAMRYSLLAGG-KRLRPILCLAACELV 77
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G + A PTA ALEM+H SLIHDDLP MD+D RRG+P+NH VYG +AILAGDA+
Sbjct: 78 GGSPELAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAGDAMLS 137
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQ 212
F+ + + VP R+LRV+ E+A G+ G+ GQ +DLE E V E++
Sbjct: 138 RAFEMVAVRSAN--VPAERLLRVVGELALVSGAPGLVGGQVVDLESEGQAVDLETLEYIH 195
Query: 213 EKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKK 272
K + V G + GA D ++Q++R Y +G+ +Q++DDIL+ A + E
Sbjct: 196 LHKTAALLRACVVTGALIGGASDQQLQAMRTYANGIGLAFQIIDDILDVTASS---EVLG 252
Query: 273 KKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAAD 325
K GK +Y G+E + E A +L ++K LD ++ D PL + DY A
Sbjct: 253 KTAGKDLLADKTTYPKLLGLEASREKALQLVRESKAALDPWR---DKAAPLLALADYVAS 309
Query: 326 RE 327
R+
Sbjct: 310 RD 311
>gi|159903660|ref|YP_001551004.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9211]
gi|159888836|gb|ABX09050.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9211]
Length = 300
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 113/302 (37%), Positives = 172/302 (56%), Gaps = 21/302 (6%)
Query: 38 TQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
+ FD Y ++ L+ ++ + P+Q+ E+MRYS+LA G KR P++C+AACEL
Sbjct: 7 SSFDFAAYLAKEKIRVEAALDASLGPERPKQLREAMRYSLLAGG-KRLRPILCLAACELI 65
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
A PTA A+EM+H SLIHDDLP MD+D RRG+P+NH VYG +AILAGDAL
Sbjct: 66 AGESETALPTAVAIEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGDALAILAGDALLT 125
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP-----NLVEFVQ 212
F+ + +P + R+++V+ E++ G+ G+ GQ DLE E + +E++
Sbjct: 126 RAFEMVSLRSPG--ISAERLIKVVGELSLVAGAPGLVGGQVADLECEGKDVDIDTLEYIH 183
Query: 213 EKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKK 272
K G + + S VCG + GA DD + +LR Y A+G+ +Q++DDIL+ T E
Sbjct: 184 IHKTGALLKASVVCGALIGGAKDDLLDALRTYAEAIGLAFQIIDDILDV---TSSSEVLG 240
Query: 273 KKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAAD 325
K GK +A GV+++ + A+ L KAK L+ ++ D+ PL + DY
Sbjct: 241 KTAGKDLIADKTTYPKLLGVDESRQRAKVLIEKAKSVLEPWE---DDATPLLALADYIIS 297
Query: 326 RE 327
R+
Sbjct: 298 RD 299
>gi|374639387|gb|AEZ55682.1| geranylgeranyl diphosphate synthase 2 [Salvia miltiorrhiza]
Length = 346
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 125/303 (41%), Positives = 178/303 (58%), Gaps = 20/303 (6%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
S F + Y + +++ L+ A+ ++ P +I+++MRYS+LA G KR PV+C+A+CEL
Sbjct: 51 SPNFKFEEYMASKAKKVNTALDDAVPLQNPLKIHQAMRYSLLAGG-KRVRPVLCLASCEL 109
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
G AA P ACALEM+H SLIHDDLPCMD+D RRG+P+ H +G + A+LAGDAL
Sbjct: 110 VGGEEAAAVPMACALEMIHTMSLIHDDLPCMDNDDLRRGRPTCHKEFGEETAVLAGDALL 169
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFV 211
L F+H+ + T V E RV++ I E+ AVGS G+ AGQ +DL E L +E++
Sbjct: 170 ALAFEHVAAKTRN--VDERRVVQAIVELGSAVGSEGLVAGQIVDLSSEGKLLSLGELEYI 227
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
K ++ E + VCG + G ++++LR+Y R VG+L+QVVDDIL+ T EE
Sbjct: 228 HVHKTSKLLEAAVVCGAIMGGGGGAQVEALRKYARCVGLLFQVVDDILDV---TKTSEEL 284
Query: 272 KKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAA 324
K GK +Y G+ KA + A +L A A +EL F PLY Y A
Sbjct: 285 GKTAGKDLVTDKATYPRLMGLRKAKDFAADLAAMAVQELSYFDP--SRAAPLYHLAQYIA 342
Query: 325 DRE 327
R+
Sbjct: 343 SRQ 345
>gi|304316765|ref|YP_003851910.1| polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302778267|gb|ADL68826.1| Polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 293
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 171/288 (59%), Gaps = 15/288 (5%)
Query: 50 ITEIDQNLEKAITVK-YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTA 108
I I+ L K + + PE +Y++MRYSV A G KR PV+C+++CEL G +R A P A
Sbjct: 10 IEYINNGLNKLLDIDDKPEILYDAMRYSVFA-GGKRLRPVLCISSCELVGGDRDDALPVA 68
Query: 109 CALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTP 168
CA+E +H SLIHDDLP MD+D RRG+P+NH VYG +AILAGDAL GF+ ++ H
Sbjct: 69 CAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEALAILAGDALLNYGFEVLIHHAL 128
Query: 169 PHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE-PNLVE----FVQEKKFGEMSECS 223
+ +LR EIA A G GM GQ +DL E N+ E F+ + K G + + S
Sbjct: 129 DSANCQ-NILRATEEIAHAAGCHGMIGGQVVDLLSENKNITEEELKFMHDHKTGALIKAS 187
Query: 224 AVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEA---KAQTPRDEEKKKKKGKS-Y 279
V G + GADD+ I+ L Y +G+ +Q+ DDIL+ +++ ++ + + GKS +
Sbjct: 188 VVAGAIMGGADDETIKKLSDYAEYIGLAFQIKDDILDVLGDESKLGKNVKSDLENGKSTF 247
Query: 280 VAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
V+ +G+++++ + +EL A A LD F G+ L S Y ADR+
Sbjct: 248 VSVFGLQRSISLVKELTASAIRILDDF---GEKSEFLKSLTKYMADRD 292
>gi|124026221|ref|YP_001015337.1| polyprenyl synthetase [Prochlorococcus marinus str. NATL1A]
gi|123961289|gb|ABM76072.1| Polyprenyl synthetase [Prochlorococcus marinus str. NATL1A]
Length = 299
Score = 203 bits (517), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 116/301 (38%), Positives = 169/301 (56%), Gaps = 21/301 (6%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
FD Y T ++ L ++ + PE++ ESMRYS+LA G KR P++C+AACEL G
Sbjct: 7 SFDFAEYLEKARTRVEDALGASLGPEKPEKLRESMRYSLLA-GGKRLRPILCLAACELAG 65
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
A PTA ALEM+H SLIHDDLP MD+D RRG+P+NH VYG +AILAGDAL
Sbjct: 66 GELEKALPTAVALEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGDAVAILAGDALLTR 125
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQE 213
F+ + T +P R+L++I E++ A G+ G+ GQ +DL+ E V E++
Sbjct: 126 AFEMVSIRTEG--IPSERLLKIIGELSLAAGAPGLVGGQVVDLDCEGKEVDLETLEYIHL 183
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K G + + CG + GAD+ + +L Y R +G+ +Q++DDIL+ A + E K
Sbjct: 184 HKTGALLKACVTCGALIGGADEKLLDALSIYARGIGLAFQIIDDILDVTASS---EVLGK 240
Query: 274 KKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK +A G++++ A+ L AKAK LD + + PL + DY R
Sbjct: 241 TAGKDLIADKTTYPKLLGLDESRRRADLLVAKAKSALD---PWPEKSKPLLALADYITSR 297
Query: 327 E 327
+
Sbjct: 298 D 298
>gi|75274213|sp|Q9LUD9.1|GGPP3_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 3,
chloroplastic; Short=GGPP synthase 3; Short=GGPS3;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 3;
AltName: Full=Dimethylallyltranstransferase 3; AltName:
Full=Farnesyl diphosphate synthase 3; AltName:
Full=Farnesyltranstransferase 3; AltName:
Full=Geranyltranstransferase 3; Flags: Precursor
gi|9294377|dbj|BAB02387.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 360
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 185/305 (60%), Gaps = 22/305 (7%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
++ FD K Y ++ L+ ++ ++ P + E++RYS+LA G KR P++C+A CEL
Sbjct: 61 NSAFDFKLYMIRKAESVNAALDVSVPLREPLTVQEAVRYSLLAGG-KRVRPLLCIAVCEL 119
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
G + A ACA+EM+H +SLIHDDLPCMD+ RRG+P+NH VYG D+A+LAGDAL
Sbjct: 120 VGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALL 179
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE---PNLV----- 208
L F+H+ + + PE R++R + E+ARA+G+TG+ AGQ +DL E P+ V
Sbjct: 180 ALAFEHMTVVSSGLVAPE-RMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHL 238
Query: 209 EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRD 268
EF+ K + E +AV G + G ++EI+ LR+Y R +G+L+QVVDDIL+ T
Sbjct: 239 EFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKST--- 295
Query: 269 EEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFID 321
EE K GK +Y G+E++ EVAE+LR +A+E+L F PL +
Sbjct: 296 EELGKTAGKDVMAGKLTYPRLIGLERSKEVAEKLRREAEEQLLGFDP--SKAAPLVALAS 353
Query: 322 YAADR 326
Y A R
Sbjct: 354 YIACR 358
>gi|186510058|ref|NP_188073.2| geranylgeranyl diphosphate synthase 3 [Arabidopsis thaliana]
gi|332642016|gb|AEE75537.1| geranylgeranyl diphosphate synthase 3 [Arabidopsis thaliana]
Length = 360
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 185/305 (60%), Gaps = 22/305 (7%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
++ FD K Y ++ L+ ++ ++ P + E++RYS+LA G KR P++C+A CEL
Sbjct: 61 NSAFDFKLYMIRKAESVNAALDVSVPLREPLTVQEAVRYSLLAGG-KRVRPLLCIAVCEL 119
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
G + A ACA+EM+H +SLIHDDLPCMD+ RRG+P+NH VYG D+A+LAGDAL
Sbjct: 120 VGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALL 179
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE---PNLV----- 208
L F+H+ + + PE R++R + E+ARA+G+TG+ AGQ +DL E P+ V
Sbjct: 180 ALAFEHMTFVSSGLVAPE-RMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHL 238
Query: 209 EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRD 268
EF+ K + E +AV G + G ++EI+ LR+Y R +G+L+QVVDDIL+ T
Sbjct: 239 EFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKST--- 295
Query: 269 EEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFID 321
EE K GK +Y G+E++ EVAE+LR +A+E+L F PL +
Sbjct: 296 EELGKTAGKDVMAGKLTYPRLIGLERSKEVAEKLRREAEEQLLGFDP--SKAAPLVALAS 353
Query: 322 YAADR 326
Y A R
Sbjct: 354 YIACR 358
>gi|26450928|dbj|BAC42571.1| putative geranylgeranyl pyrophosphate synthase GGPS3 [Arabidopsis
thaliana]
Length = 360
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 125/305 (40%), Positives = 184/305 (60%), Gaps = 22/305 (7%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
++ FD K Y ++ L+ ++ ++ P + E++RYS+LA G KR P++C+A CEL
Sbjct: 61 NSAFDFKLYMIRKAESVNAALDVSVPLREPLTVQEAVRYSLLAGG-KRVRPLLCIAVCEL 119
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
G + A ACA+EM+H +SLIHDDLPCMD+ RRG+P+NH VYG D+A+LAGDAL
Sbjct: 120 VGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALL 179
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE---PNLV----- 208
L F+H+ + + PE R++R + E+AR +G+TG+ AGQ +DL E P+ V
Sbjct: 180 ALAFEHMTVVSSGLVAPE-RMIRAVVELARTIGTTGLVAGQMIDLASERLNPDKVGLEHL 238
Query: 209 EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRD 268
EF+ K + E +AV G + G ++EI+ LR+Y R +G+L+QVVDDIL+ T
Sbjct: 239 EFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKST--- 295
Query: 269 EEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFID 321
EE K GK +Y G+E++ EVAE+LR +A+E+L F PL +
Sbjct: 296 EELGKTAGKDVMAGKLTYPRLIGLERSKEVAEKLRREAEEQLLGFDP--SKAAPLVALAS 353
Query: 322 YAADR 326
Y A R
Sbjct: 354 YIACR 358
>gi|15231877|ref|NP_188071.1| geranylgeranyl diphosphate synthase 9 [Arabidopsis thaliana]
gi|75274215|sp|Q9LUE1.1|GGPP9_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 9,
chloroplastic; Short=GGPP synthase 9; Short=GGPS9;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 9;
AltName: Full=Dimethylallyltranstransferase 9; AltName:
Full=Farnesyl diphosphate synthase 9; AltName:
Full=Farnesyltranstransferase 9; AltName:
Full=Geranyltranstransferase 9; Flags: Precursor
gi|9294375|dbj|BAB02385.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|34365549|gb|AAQ65086.1| At3g14530 [Arabidopsis thaliana]
gi|332642014|gb|AEE75535.1| geranylgeranyl diphosphate synthase 9 [Arabidopsis thaliana]
Length = 360
Score = 200 bits (509), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 128/309 (41%), Positives = 184/309 (59%), Gaps = 22/309 (7%)
Query: 33 SQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVA 92
S ++ FD K Y ++ L+ ++ + P I E++RYS+LA G KR P++C+A
Sbjct: 57 SNDNNSAFDFKLYMIRKAESVNAALDVSVPLLKPLTIQEAVRYSLLAGG-KRVRPLLCIA 115
Query: 93 ACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAG 152
ACEL G + A ACA+EM+H +SLIHDDLPCMD+ RRG+P+NH VYG D+A+LAG
Sbjct: 116 ACELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAG 175
Query: 153 DALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE---PNLV- 208
DAL L F+H+ + + PE +++R + E+ARA+G+TG+ AGQ +DL E P+ V
Sbjct: 176 DALLALAFEHMTVVSSGLVAPE-KMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVG 234
Query: 209 ----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQ 264
EF+ K + E +AV G + G + EI+ LR+Y R +G+L+QVVDDIL+
Sbjct: 235 LEHLEFIHLHKTAALLEAAAVLGVIMGGGTEQEIEKLRKYARCIGLLFQVVDDILDVTKS 294
Query: 265 TPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLY 317
T EE K GK +Y G+E + EVAE+LR +A+E+L F PL
Sbjct: 295 T---EELGKTAGKDVMAGKLTYPRLIGLEGSREVAEKLRREAEEQLLGFDP--SKAAPLV 349
Query: 318 SFIDYAADR 326
+ Y A R
Sbjct: 350 ALASYIACR 358
>gi|126659033|ref|ZP_01730174.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. CCY0110]
gi|126619690|gb|EAZ90418.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. CCY0110]
Length = 309
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/308 (39%), Positives = 180/308 (58%), Gaps = 22/308 (7%)
Query: 33 SQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVA 92
+ ++ FDL +Y ++ L++++ + PE+IYE+MRYS+LA G KR P++C+
Sbjct: 10 THTEASDFDLASYLKDKKQLVEAALDQSLPIIRPEKIYEAMRYSLLAGG-KRLRPILCLT 68
Query: 93 ACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAG 152
CEL G + PTACALEM+H SLIHDDLP MDDD RRG+ +NH VYG DIAILAG
Sbjct: 69 TCELMGGTVEMSLPTACALEMIHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEDIAILAG 128
Query: 153 DALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL----- 207
DAL F+++ + T V ++ VIA + R VG+ G+ GQ LDLE E L
Sbjct: 129 DALLSYAFEYVATQTRN--VDLANLMNVIARLGRTVGAAGLVGGQVLDLESEGKLDVTVD 186
Query: 208 -VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP 266
++F+ K G + E S V G LAGA ++++ L RY + +G+ +Q++DDIL+ A T
Sbjct: 187 TLKFIHIHKTGALLETSVVSGAILAGAKQEDVERLSRYAQNIGLAFQIIDDILDVTAST- 245
Query: 267 RDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSF 319
EE K GK +Y + +G+E++ + A+ L A ++D YG + PL +
Sbjct: 246 --EELGKTAGKDQRDKKATYPSLWGLEESQKQAQALIDDAIAQVD---PYGQSAQPLKAI 300
Query: 320 IDYAADRE 327
+ R+
Sbjct: 301 AQFIVARK 308
>gi|15231869|ref|NP_188069.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana]
gi|332642012|gb|AEE75533.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana]
Length = 284
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 175/283 (61%), Gaps = 22/283 (7%)
Query: 59 KAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAAS 118
+++ ++ P + E++RYS+LA G KR P++C+A CEL G + A ACA+EM+H +S
Sbjct: 7 RSVPLREPLTVQEAVRYSLLAGG-KRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSS 65
Query: 119 LIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVL 178
LIHDDLPCMD+ RRG+P+NH V+G D+A+LAGDAL L F+H+ + LV R++
Sbjct: 66 LIHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHM-TVVSSGLVASERMI 124
Query: 179 RVIAEIARAVGSTGMAAGQFLDLEGE---PNLV-----EFVQEKKFGEMSECSAVCGGFL 230
R + E+ARA+G+ G+ AGQ +DL E P+ V EF+ K + E +AV G +
Sbjct: 125 RAVVELARAIGTKGLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAAAVIGAIM 184
Query: 231 AGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVA-------FY 283
G ++EI+ LR+Y R +G+L+QVVDDIL+ T EE K GK +A
Sbjct: 185 GGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKST---EELGKTAGKDVMAGKLTYPRLI 241
Query: 284 GVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
G+E++ EVAE+L +A+E+L F+ D PL + Y + R
Sbjct: 242 GLERSREVAEKLSREAEEQLLGFES--DKAAPLVALASYISCR 282
>gi|219115519|ref|XP_002178555.1| farnesyltranstransferase [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410290|gb|EEC50220.1| farnesyltranstransferase [Phaeodactylum tricornutum CCAP 1055/1]
Length = 337
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/342 (35%), Positives = 184/342 (53%), Gaps = 29/342 (8%)
Query: 2 IFSSALLANPPCVCLPRKFPVRCSSLPVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAI 61
+ S L++ P F R P +T FDL Y + I++ L++++
Sbjct: 8 LVSLTTLSSASAFVAPSTFHFR----PRVTLQSTAATDFDLNQYIADKLPLIEKALDESV 63
Query: 62 --TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG-VNRIAAFPTACALEMVHAAS 118
T K E+I E+M+YS++A G KR PV+C+AACE+F + A P A +LEM+H S
Sbjct: 64 VSTEKETEKIVEAMKYSLMAGG-KRIRPVLCLAACEMFNDGDSTPAMPAAVSLEMIHTMS 122
Query: 119 LIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVL 178
LIHDDLP MD+D RRG+P+ H +YG D+AILAGDAL F+H+ T V RVL
Sbjct: 123 LIHDDLPSMDNDDLRRGKPTCHVIYGEDVAILAGDALLSDSFRHVAEQTKG--VAADRVL 180
Query: 179 RVIAEIARAVGSTGMAAGQFLDLE----GEPNL--VEFVQEKKFGEMSECSAVCGGFLAG 232
V+ + R+VG+ G+A GQ +DLE G L + ++ K + + + G + G
Sbjct: 181 DVVVRLGRSVGAKGLAGGQVMDLECEGKGSATLEDLRWIHTHKTATLLQVAVASGAIIGG 240
Query: 233 ADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGV 285
A +E+++ ++ +G+ +QV DDIL+ T EE K GK +Y G+
Sbjct: 241 ASAEEVKACEQFALNIGLAFQVADDILDVTQST---EELGKTAGKDEDTDKTTYPKLLGL 297
Query: 286 EKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+ A E AE L A+AK+ L+ F GD L + D+ +R+
Sbjct: 298 DGAREEAERLVAEAKKSLEPF---GDRATALLALADFIINRK 336
>gi|297847270|ref|XP_002891516.1| hypothetical protein ARALYDRAFT_891852 [Arabidopsis lyrata subsp.
lyrata]
gi|297337358|gb|EFH67775.1| hypothetical protein ARALYDRAFT_891852 [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 117/277 (42%), Positives = 161/277 (58%), Gaps = 24/277 (8%)
Query: 68 QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCM 127
++ E+MRY++L+ G KR P++C+ ACEL G A P ACA+EM+HA+SLI DDLPCM
Sbjct: 67 EVREAMRYTLLSGG-KRVRPMLCLVACELVGGQESTAMPAACAVEMIHASSLILDDLPCM 125
Query: 128 DDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARA 187
DDD RRG+P+NH V+G AILA +AL L + ++ T + E RVLR + E+ARA
Sbjct: 126 DDDSLRRGKPTNHKVFGEKTAILAANALMSLAVEQTLASTSLGVTSE-RVLRAVQEMARA 184
Query: 188 VGSTGMAAGQFLDLEGEP----------NLVEFVQEKKFGEMSECSAVCGGFLAGADDDE 237
VG G+ AGQ DL G +EF+ K + E +AV G + G D+E
Sbjct: 185 VGIEGLVAGQAADLAGGRMSFETEDEGLRYLEFIHIHKTAVLVEAAAVVGAIMGGGSDEE 244
Query: 238 IQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAME 290
I+ L+ Y R VG+++QV+DD+L+ +T EE K GK +Y GVE A E
Sbjct: 245 IERLKSYARCVGLMFQVMDDVLD---ETKSSEELGKTAGKDLITGKLTYPKVMGVENARE 301
Query: 291 VAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
A+ L +A+E L F D V+PL S DY R+
Sbjct: 302 YAKRLNREAQEHLQGFDS--DKVVPLLSLADYIVKRQ 336
>gi|11994221|dbj|BAB01343.1| geranyl geranyl pyrophosphate synthase-like protein [Arabidopsis
thaliana]
Length = 306
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 118/276 (42%), Positives = 170/276 (61%), Gaps = 22/276 (7%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + E++RYS+LA G KR P++C+A CEL G + A ACA+EM+H +SLIHDDLP
Sbjct: 36 PLTVQEAVRYSLLAGG-KRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLP 94
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMD+ RRG+P+NH V+G D+A+LAGDAL L F+H+ + LV R++R + E+A
Sbjct: 95 CMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHM-TVVSSGLVASERMIRAVVELA 153
Query: 186 RAVGSTGMAAGQFLDLEGE---PNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDE 237
RA+G+ G+ AGQ +DL E P+ V EF+ K + E +AV G + G ++E
Sbjct: 154 RAIGTKGLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAAAVIGAIMGGGTEEE 213
Query: 238 IQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVA-------FYGVEKAME 290
I+ LR+Y R +G+L+QVVDDIL+ T EE K GK +A G+E++ E
Sbjct: 214 IEKLRKYARCIGLLFQVVDDILDVTKST---EELGKTAGKDVMAGKLTYPRLIGLERSRE 270
Query: 291 VAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
VAE+L +A+E+L F+ D PL + Y + R
Sbjct: 271 VAEKLSREAEEQLLGFES--DKAAPLVALASYISCR 304
>gi|2578822|dbj|BAA23157.1| geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 343
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 128/339 (37%), Positives = 185/339 (54%), Gaps = 42/339 (12%)
Query: 24 CSSLPVSAASQLR----------STQFDLKTYWTTLITEIDQNLEKAI-----TVKYPE- 67
C SL +SA +R S+ + +Y I++ L+ +I +V E
Sbjct: 11 CYSLVLSAMRLIRPSNRRLSSIASSDSEFISYMNNKAKSINKALDNSIPLCNNSVPLWEP 70
Query: 68 --QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
+++++MRY++L+ G KR P++C+ ACEL G A P ACA+EM+HAASLI DDLP
Sbjct: 71 VLEVHKAMRYTLLS-GGKRVRPMLCLVACELVGGQESTAMPAACAVEMIHAASLILDDLP 129
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG P+NH V+G +ILA +AL L + ++ T + E RVLR + E+A
Sbjct: 130 CMDDDSLRRGIPTNHKVFGEKTSILASNALMSLAVKQTLASTSLGVTSE-RVLRAVQEMA 188
Query: 186 RAVGSTGMAAGQFLDLEGEP----------NLVEFVQEKKFGEMSECSAVCGGFLAGADD 235
RAVG+ G+ AGQ DL GE +E + K + E +AV G + G D
Sbjct: 189 RAVGTEGLVAGQAADLAGERMSFKNEDDELRYLELMHVHKTAVLVEAAAVVGAIMGGGSD 248
Query: 236 DEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKA 288
+EI+ L+ Y R VG+++QV+DD+L+ +T EE K GK +Y GV+ A
Sbjct: 249 EEIERLKSYARCVGLMFQVMDDVLD---ETKSSEELGKTAGKDLITGKLTYPKVMGVDNA 305
Query: 289 MEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
E A+ L +A+E L F D V+PL S DY R+
Sbjct: 306 REYAKRLNREAQEHLQGFD--SDKVVPLLSLADYIVKRQ 342
>gi|18146809|dbj|BAB82463.1| geranylgeranyl pyrophosphate synthase [Gentiana lutea]
Length = 367
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/306 (37%), Positives = 171/306 (55%), Gaps = 23/306 (7%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
S FD K Y ++++ L++A++VK P I+E+MRYS+LA G KR P++C+AACEL
Sbjct: 69 SNYFDFKAYLIEKANKVNEALDQAVSVKNPPMIHEAMRYSLLA-GGKRVRPILCIAACEL 127
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGV-DIAILAGDAL 155
G + P ACA+EM+H SLIHDDLPC RRG+ T D+A+LAGD+L
Sbjct: 128 VGGEESNSVPAACAVEMIHTMSLIHDDLPCYGQRDLRRGKAHETTKSSCEDVAVLAGDSL 187
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLD--LEGEPNL-----V 208
F++I + T ++ P R I++++G+ G+ AGQ D + GE + +
Sbjct: 188 LAFSFEYIATAT-KNVSPAKNFSRS-RRISKSIGTEGLVAGQVADFVINGENQMFGLDQL 245
Query: 209 EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRD 268
EF+ K + E + V G L G + +E++ LRR+ R +G+L+QVVDDIL+ T
Sbjct: 246 EFIHIHKTAALLEAAVVLGAILGGGNPEEVEKLRRFARCIGLLFQVVDDILDV---TKSS 302
Query: 269 EEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFID 321
EE K GK +Y G++ A E A++L AK +L F + + PL + D
Sbjct: 303 EELGKTAGKRSCGGKTTYPKLMGLDGAREFADKLNKDAKNQLSEFDR--EKAAPLLALAD 360
Query: 322 YAADRE 327
Y A R+
Sbjct: 361 YIAYRQ 366
>gi|126030919|pdb|2J1O|A Chain A, Geranylgeranyl Diphosphate Synthase From Sinapis Alba
Length = 268
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/286 (39%), Positives = 168/286 (58%), Gaps = 35/286 (12%)
Query: 44 TYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIA 103
+Y +++ L+ A+ ++ P +I+E+MRYS+LA G KR PV+C+AACEL G
Sbjct: 15 SYIIRKADSVNKALDSAVPLREPLKIHEAMRYSLLAGG-KRVRPVLCIAACELVGGEESL 73
Query: 104 AFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHI 163
A P ACA+EM+H SLIHDD VYG D+A+LAGDAL F+H+
Sbjct: 74 AMPAACAVEMIHTMSLIHDD------------------VYGEDVAVLAGDALLSFAFEHL 115
Query: 164 VSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLE--GEPNLVEFVQEKKFGEMSE 221
S T + P RV+R + E+A+A+G+ G+ AGQ +D+ G +L +F+ K + E
Sbjct: 116 ASATSSEVSP-ARVVRAVGELAKAIGTEGLVAGQVVDISNVGLEHL-KFIHLHKTAALLE 173
Query: 222 CSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVA 281
SAV GG + G D+EI+ LR++ R +G+L+QVVDDIL+ T D+ +Y
Sbjct: 174 ASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDV---TIADK-------LTYPK 223
Query: 282 FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
G+EK+ E AE+L +A+++L F D V PL + +Y A+R+
Sbjct: 224 LMGLEKSREFAEKLNTEARDQLLGFDS--DKVAPLLALANYIANRQ 267
>gi|15232010|ref|NP_189747.1| geranylgeranyl diphosphate synthase 12 [Arabidopsis thaliana]
gi|75263903|sp|Q9LHR4.1|GGPPC_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 12,
chloroplastic; Short=GGPP synthase 12; Short=GGPS12;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 12;
AltName: Full=Dimethylallyltranstransferase 12; AltName:
Full=Farnesyl diphosphate synthase 12; AltName:
Full=Farnesyltranstransferase 12; AltName:
Full=Geranyltranstransferase 12; Flags: Precursor
gi|9294084|dbj|BAB01936.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|50253560|gb|AAT71982.1| At3g32040 [Arabidopsis thaliana]
gi|332644160|gb|AEE77681.1| geranylgeranyl diphosphate synthase 12 [Arabidopsis thaliana]
Length = 360
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 127/316 (40%), Positives = 184/316 (58%), Gaps = 22/316 (6%)
Query: 27 LPVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAP 86
+P S R+ FD K+Y + L ++ + P I E++RYS+LA G KR
Sbjct: 51 IPPKGKSNDRNFAFDFKSYMIRKAESVSMALNVSVPPQDPLAIQEAVRYSLLAGG-KRVR 109
Query: 87 PVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVD 146
P++C+AACEL G + A ACA+EM+H +SLIHDDLPCMDD RRG+P+NH V+G
Sbjct: 110 PLLCIAACELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEH 169
Query: 147 IAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP- 205
+A+LAGDAL L F+H+ + + PE R++R + E+A+A+G+ G+ AGQ DL +
Sbjct: 170 MAVLAGDALLALAFEHMTVVSSGLVAPE-RMIRSVTELAKAIGTKGLVAGQVSDLCSQGL 228
Query: 206 -------NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDI 258
+EF+ K + E +AV G + G ++EIQ LR+YGR +G+L+QVVDDI
Sbjct: 229 NPYDVGLERLEFIHLHKTAALLEAAAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDI 288
Query: 259 LEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGD 311
++ T EE K GK +Y G+E++ EVAE+LR +A E+L F +
Sbjct: 289 IDVTEST---EELGKTAGKDVMARKLTYPRLIGLERSREVAEKLRREAAEQLLGFDS--N 343
Query: 312 NVLPLYSFIDYAADRE 327
V PL + Y A R
Sbjct: 344 KVAPLVALASYIACRH 359
>gi|62320250|dbj|BAD94520.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 360
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 127/316 (40%), Positives = 184/316 (58%), Gaps = 22/316 (6%)
Query: 27 LPVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAP 86
+P S R+ FD K+Y + L ++ + P I E++RYS+LA G KR
Sbjct: 51 IPPKGKSNDRNFAFDFKSYMIRKAESVSMALNVSVPPQDPLAIQEAVRYSLLA-GGKRVR 109
Query: 87 PVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVD 146
P++C+AACEL G + A ACA+EM+H +SLIHDDLPCMDD RRG+P+NH V+G
Sbjct: 110 PLLCIAACELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEH 169
Query: 147 IAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP- 205
+A+LAGDAL L F+H+ + + PE R++R + E+A+A+G+ G+ AGQ DL +
Sbjct: 170 MAVLAGDALLALAFEHMTVVSSGLVAPE-RMIRSVTELAKAIGTKGLVAGQVSDLCSQGL 228
Query: 206 -------NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDI 258
+EF+ K + E +AV G + G ++EIQ LR+YGR +G+L+QVVDDI
Sbjct: 229 NPYDVGLERLEFIHLHKTAALLEAAAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDI 288
Query: 259 LEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGD 311
++ T EE K GK +Y G+E++ EVAE+LR +A E+L F +
Sbjct: 289 IDVTEST---EELGKTAGKDVKARKLTYPRLIGLERSREVAEKLRREAAEQLLGFDS--N 343
Query: 312 NVLPLYSFIDYAADRE 327
V PL + Y A R
Sbjct: 344 KVAPLVALASYIACRH 359
>gi|449017049|dbj|BAM80451.1| geranylgeranyl diphosphate synthase, chloroplast precursor
[Cyanidioschyzon merolae strain 10D]
Length = 388
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/291 (41%), Positives = 156/291 (53%), Gaps = 24/291 (8%)
Query: 53 IDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACA 110
ID L A+ T ++ E+MRYS+LA G KR P + +AAC +FG A PTA A
Sbjct: 103 IDAALNDAVQATSVMNARLAEAMRYSLLAGG-KRVRPALVLAACRMFGGVDEQAMPTAVA 161
Query: 111 LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPH 170
+EMVH SLIHDDLP MD+D RRG+P+NH VYG ++AILAGDAL F I TP
Sbjct: 162 VEMVHTMSLIHDDLPAMDNDDFRRGRPTNHKVYGEEVAILAGDALLSEAFSQIAEKTPAT 221
Query: 171 LVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN--------LVEFVQEKKFGEMSEC 222
LVP R L VI + VG G+AAGQ LDLE E ++E + K +
Sbjct: 222 LVPPSRTLEVIRRLGNCVGLHGLAAGQALDLEAEGKPADEISLRMLETIHLYKTAALLRF 281
Query: 223 SAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVA- 281
S G LAGA D+I + + +G+ +QV DD+L+ A T E K GK A
Sbjct: 282 SITAGAILAGASVDDIDCMESFANKIGLAFQVADDVLDVTATT---ETLGKTAGKDVAAE 338
Query: 282 ------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
G+E++ + AE+L +AK EL KYGD L F D+ R
Sbjct: 339 KATFPRILGLEESRKYAEDLVKEAKGEL---AKYGDRASLLLGFADFIIQR 386
>gi|308080812|ref|NP_001183944.1| putative geranylgeranyl pyrophosphate synthase 2 [Zea mays]
gi|148535921|gb|ABQ85647.1| putative geranylgeranyl pyrophosphate synthase 2 [Zea mays]
Length = 361
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/311 (40%), Positives = 180/311 (57%), Gaps = 26/311 (8%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVK-YPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
+T+F+ K Y +++ L+ AI P ++++MRY++LA G KR P +C+AAC
Sbjct: 56 TTEFNFKAYMEERAVAVNRALDAAIPAGGLPAALHDAMRYALLAGG-KRVRPALCLAACA 114
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
+ G A P A A+EMVH SL+HDDLPCMDDD RRG+P+ H VYG IA+LAGDAL
Sbjct: 115 VVGGPESWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGDAL 174
Query: 156 FPLGFQHI--VSHTPPHLVPE---PRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN---- 206
L F H+ V PP + PE RV+R I E+AR +GS G+ AGQ +DLE
Sbjct: 175 LSLSFHHMASVGSYPPAVDPEKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGTSQTV 234
Query: 207 ---LVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA 263
L+E++ K + E S V G + G D++I++LR+Y R++G+L+QVVDDIL+
Sbjct: 235 PLELLEYIHLHKTAALLEASVVIGAIIGGGTDEQIEALRKYARSIGLLFQVVDDILDV-- 292
Query: 264 QTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPL 316
T EE K GK +Y G+ K+ E AE+L + A E+L F + + PL
Sbjct: 293 -TKSSEELGKTAGKDLASDKTTYPKLLGLAKSREFAEKLVSDATEQLACFDE--EKAAPL 349
Query: 317 YSFIDYAADRE 327
+Y A R+
Sbjct: 350 LHLANYIAHRQ 360
>gi|15228704|ref|NP_189589.1| geranylgeranyl diphosphate synthase 11 [Arabidopsis thaliana]
gi|75335025|sp|Q9LIA0.1|GGPPB_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 11,
chloroplastic; Short=GGPP synthase 11; Short=GGPS11;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 11;
AltName: Full=Dimethylallyltranstransferase 11; AltName:
Full=Farnesyl diphosphate synthase 11; AltName:
Full=Farnesyltranstransferase 11; AltName:
Full=Geranyltranstransferase 11; Flags: Precursor
gi|11994525|dbj|BAB02589.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|67633672|gb|AAY78760.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|332644062|gb|AEE77583.1| geranylgeranyl diphosphate synthase 11 [Arabidopsis thaliana]
Length = 357
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 128/315 (40%), Positives = 187/315 (59%), Gaps = 22/315 (6%)
Query: 27 LPVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAP 86
+P S R++ FD K+Y + L ++ ++ P I E++RYS+LA G KR
Sbjct: 48 IPPEGKSNDRNSAFDFKSYMIRKAESVSAALNVSVPLQEPLTIQEAVRYSLLAGG-KRVR 106
Query: 87 PVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVD 146
P++C+AACEL G + A ACA+EM+H +SLIHDDLPCMDD RRG+P+NH +G D
Sbjct: 107 PLLCIAACELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKEFGED 166
Query: 147 IAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EG- 203
+A+LAGDAL L F+H+ + + PE R++R + E+A+A+G+ G+ AGQ DL +G
Sbjct: 167 MAVLAGDALLALAFEHMTFVSNGLVAPE-RMIRAVMELAKAIGTKGLVAGQVTDLCSQGL 225
Query: 204 EPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDI 258
P+ V EF+ K + E +AV G + G ++EI+ LR+Y R +G+L+QVVDDI
Sbjct: 226 NPDDVGLERLEFIHLHKTAALLEAAAVLGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDI 285
Query: 259 LEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGD 311
L+ T +E K GK +Y G+E++ EVAE+LR +A E+L F D
Sbjct: 286 LDVTEST---KELGKTAGKDVMAGKLTYPRLIGLERSREVAEKLRREAAEQLLGFDS--D 340
Query: 312 NVLPLYSFIDYAADR 326
PL + Y A R
Sbjct: 341 KAAPLVALASYIACR 355
>gi|15222767|ref|NP_175376.1| geranylgeranyl pyrophosphate synthase 1 [Arabidopsis thaliana]
gi|85540951|sp|O22043.2|GGPP6_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 6,
mitochondrial; Short=GGPP synthase 6; Short=GGPS6;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 6;
AltName: Full=Dimethylallyltranstransferase 6; AltName:
Full=Farnesyl diphosphate synthase 6; AltName:
Full=Farnesyltranstransferase 6; AltName:
Full=Geranyltranstransferase 6; Flags: Precursor
gi|5430748|gb|AAD43148.1|AC007504_3 geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|40823199|gb|AAR92266.1| At1g49530 [Arabidopsis thaliana]
gi|45752710|gb|AAS76253.1| At1g49530 [Arabidopsis thaliana]
gi|332194318|gb|AEE32439.1| geranylgeranyl pyrophosphate synthase 1 [Arabidopsis thaliana]
Length = 336
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/277 (41%), Positives = 162/277 (58%), Gaps = 24/277 (8%)
Query: 68 QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCM 127
+++++MRY++L G KR P++C+ ACEL G A P ACA+EM+HAASLI DDLPCM
Sbjct: 66 EVHKAMRYTLLP-GGKRVRPMLCLVACELVGGQESTAMPAACAVEMIHAASLILDDLPCM 124
Query: 128 DDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARA 187
DDD RRG+P+NH V+G +ILA +AL L + ++ T + E RVLR + E+ARA
Sbjct: 125 DDDSLRRGKPTNHKVFGEKTSILASNALRSLAVKQTLASTSLGVTSE-RVLRAVQEMARA 183
Query: 188 VGSTGMAAGQFLDLEGEP----------NLVEFVQEKKFGEMSECSAVCGGFLAGADDDE 237
VG+ G+ AGQ DL GE +E + K + E +AV G + G D+E
Sbjct: 184 VGTEGLVAGQAADLAGERMSFKNEDDELRYLELMHVHKTAVLVEAAAVVGAIMGGGSDEE 243
Query: 238 IQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAME 290
I+ L+ Y R VG+++QV+DD+L+ +T EE K GK +Y GV+ A E
Sbjct: 244 IERLKSYARCVGLMFQVMDDVLD---ETKSSEELGKTAGKDLITGKLTYPKVMGVDNARE 300
Query: 291 VAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
A+ L +A+E L F D V+PL S DY R+
Sbjct: 301 YAKRLNREAQEHLQGFD--SDKVVPLLSLADYIVKRQ 335
>gi|414887302|tpg|DAA63316.1| TPA: putative geranylgeranyl pyrophosphate synthase 2 [Zea mays]
Length = 441
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/311 (40%), Positives = 180/311 (57%), Gaps = 26/311 (8%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVK-YPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
+T+F+ K Y +++ L+ AI P ++++MRY++LA G KR P +C+AAC
Sbjct: 136 TTEFNFKAYMEERAVAVNRALDAAIPAGGLPAALHDAMRYALLAGG-KRVRPALCLAACA 194
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
+ G A P A A+EMVH SL+HDDLPCMDDD RRG+P+ H VYG IA+LAGDAL
Sbjct: 195 VVGGPESWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGDAL 254
Query: 156 FPLGFQHI--VSHTPPHLVPE---PRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN---- 206
L F H+ V PP + PE RV+R I E+AR +GS G+ AGQ +DLE
Sbjct: 255 LSLSFHHMASVGSYPPAVDPEKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGTSQTV 314
Query: 207 ---LVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA 263
L+E++ K + E S V G + G D++I++LR+Y R++G+L+QVVDDIL+
Sbjct: 315 PLELLEYIHLHKTAALLEASVVIGAIIGGGTDEQIEALRKYARSIGLLFQVVDDILDV-- 372
Query: 264 QTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPL 316
T EE K GK +Y G+ K+ E AE+L + A E+L F + + PL
Sbjct: 373 -TKSSEELGKTAGKDLASDKTTYPKLLGLAKSREFAEKLVSDATEQLACFDE--EKAAPL 429
Query: 317 YSFIDYAADRE 327
+Y A R+
Sbjct: 430 LHLANYIAHRQ 440
>gi|427701630|ref|YP_007044852.1| geranylgeranyl pyrophosphate synthase [Cyanobium gracile PCC 6307]
gi|427344798|gb|AFY27511.1| geranylgeranyl pyrophosphate synthase [Cyanobium gracile PCC 6307]
Length = 300
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/280 (38%), Positives = 162/280 (57%), Gaps = 18/280 (6%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
ST FD Y ++ LE A+ + PE + E+MRYS+LA G KR P++ +AACEL
Sbjct: 6 STAFDFTAYLEAARWRVEAALESALGPERPESLREAMRYSLLAGG-KRLRPILTLAACEL 64
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
G + A PTA A+EM+H SLIHDDLP MD+D RRG+P+NH VYG AILAGDAL
Sbjct: 65 AGGDADLAMPTAVAMEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGEAKAILAGDALL 124
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP-----NLVEFV 211
F+ + +P VP R+L+V+ E++ A G+ G+ GQ +DLE E + +E++
Sbjct: 125 TRAFEMVALRSPG--VPAERLLQVVGELSLASGAPGLVGGQVVDLECEARQVDLDTLEYI 182
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
K G + + G +AGA ++ + +LR Y R +G+ +Q++DDIL+ A + +
Sbjct: 183 HLHKTGALLRACVISGALIAGASEELLTALRTYARGIGLAFQIIDDILDVTASS---DVL 239
Query: 272 KKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELD 304
K GK +Y G+E++ A+ L +AK L+
Sbjct: 240 GKTAGKDLAADKTTYPKLLGLEESRRRADALVGEAKAVLE 279
>gi|308081242|ref|NP_001183930.1| putative geranylgeranyl pyrophosphate synthase 1 [Zea mays]
gi|148535919|gb|ABQ85646.1| putative geranylgeranyl pyrophosphate synthase 1 [Zea mays]
gi|414590653|tpg|DAA41224.1| TPA: hypothetical protein ZEAMMB73_231747 [Zea mays]
Length = 367
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/309 (42%), Positives = 179/309 (57%), Gaps = 26/309 (8%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITV-KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
+FD K Y +++ L+ A+ + P ++++MRY++LA G KR P +C+AAC +
Sbjct: 64 EFDFKAYMGERAVAVNRALDAAVPAGEPPAALHDAMRYALLAGG-KRVRPALCLAACAVV 122
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G A P A A+EMVH SL+HDDLPCMDDD RRG+P+ H VYG IA+LAGDAL
Sbjct: 123 GGPEPWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGDALLS 182
Query: 158 LGFQHI--VSHTPPHLVPE---PRVLRVIAEIARAVGSTGMAAGQFLDLE--GEPNLV-- 208
L F H+ V PP + PE RV+R I E+AR +GS G+ AGQ +DLE G V
Sbjct: 183 LSFHHMASVGSYPPDVDPEKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGTSETVPL 242
Query: 209 ---EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT 265
E++ K + E S V G + G D++I+ LR+Y R++G+L+QVVDDIL+ T
Sbjct: 243 ERLEYIHLHKTAALLEASVVIGAIIGGGTDEQIERLRKYARSIGLLFQVVDDILDV---T 299
Query: 266 PRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYS 318
EE K GK +Y G+EK+ E AEEL + A E+L F K + PL
Sbjct: 300 KSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEELLSDAVEQLACFDK--EKAAPLLH 357
Query: 319 FIDYAADRE 327
+Y A R+
Sbjct: 358 LANYIAHRQ 366
>gi|356572072|ref|XP_003554194.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Glycine max]
Length = 343
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 124/330 (37%), Positives = 185/330 (56%), Gaps = 33/330 (10%)
Query: 17 PRKFPVRCSSLPVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYS 76
P+ F S+LP S+A FD K Y I +++ L+ A+ ++ P +++E+MRY+
Sbjct: 27 PKLFSSVNSTLPFSSAPN-----FDFKAYMLDKINTVNRALDAAVALREPRKLHEAMRYT 81
Query: 77 VLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQ 136
+LA G KR PV+C+AAC L G + A P ACA+EM+H SLIHDDLPCMD+D RRG+
Sbjct: 82 LLAGG-KRIRPVLCLAACSLVGGSEATAIPAACAVEMIHTMSLIHDDLPCMDNDDLRRGK 140
Query: 137 PSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAG 196
P++H ++G +A+LAGDAL L F+H+ + T RV+R I E+A+ +G+ G+ AG
Sbjct: 141 PTSHKIFGEHVAVLAGDALLALAFEHVAASTEGAYA--ARVVRAIGELAKCIGAEGVMAG 198
Query: 197 QFLDLEGEP------------NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRY 244
Q +D+ E +EF+ K + E + V G L G D+EI+ LR +
Sbjct: 199 QVVDVNSEGLTLSMSDEVAVLERLEFIHVHKTA-VVEGAVVMGAILGGGSDEEIERLRMF 257
Query: 245 GRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVA-------FYGVEKAMEVAEELRA 297
GR +G+L QVVDD+L+ T EE K K VA G+ ++ E A +L
Sbjct: 258 GRCIGLLGQVVDDVLDV---TKSSEELGKTAKKDLVADKLTYPKVLGIHESKEFAHKLVH 314
Query: 298 KAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
A + L F + PL++ +Y A R+
Sbjct: 315 DANKMLAGF--HPPKAAPLFALTNYIAYRQ 342
>gi|333897019|ref|YP_004470893.1| polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333112284|gb|AEF17221.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 293
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 110/271 (40%), Positives = 157/271 (57%), Gaps = 14/271 (5%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
PE ++E+M+YSV A G KR PV+C++ACEL G N+ A P ACA+E +H SLIHDDLP
Sbjct: 27 PEVLFEAMKYSVFA-GGKRLRPVLCISACELVGGNKEDALPVACAIEFIHTYSLIHDDLP 85
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
MD+D RRG+P+NH VYG IAILAGDAL GF+ ++ +L+ EIA
Sbjct: 86 AMDNDDLRRGKPTNHKVYGEAIAILAGDALLNYGFEVLIQQALNS-NKSQNILKAADEIA 144
Query: 186 RAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
RA G GM AGQ +DL E + +F+ + K G + + S + G + GAD ++
Sbjct: 145 RAAGCRGMIAGQVVDLLSENKEIGEYDLKFMHDHKTGALIKASILAGAIIGGADAATLKK 204
Query: 241 LRRYGRAVGVLYQVVDDILEAK---AQTPRDEEKKKKKGKS-YVAFYGVEKAMEVAEELR 296
L Y +G +QV DDIL+ + A+ +D GKS +V+ G+++++E+ EL
Sbjct: 205 LSSYAEYLGFAFQVKDDILDVQGDEAKLGKDIGSDIANGKSTFVSVLGLQRSVELVNELT 264
Query: 297 AKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
KA L+ F G+ L S Y A+R+
Sbjct: 265 EKAISILNDFGNKGE---FLKSLTKYMAERD 292
>gi|390935023|ref|YP_006392528.1| polyprenyl synthetase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389570524|gb|AFK86929.1| Polyprenyl synthetase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 293
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/271 (40%), Positives = 156/271 (57%), Gaps = 14/271 (5%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
PE ++E+MRYSV A G KR PV+C++ CEL G N+ A ACA+E +H SLIHDDLP
Sbjct: 27 PEVLFEAMRYSVFA-GGKRLRPVLCISTCELVGGNKEDALAVACAIEFIHTYSLIHDDLP 85
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
MD+D RRG+P+NH VYG IAILAGDAL GF+ ++ +L+ EIA
Sbjct: 86 AMDNDDLRRGKPTNHKVYGEAIAILAGDALLNYGFEVLIQQALNS-SKSQNILKAADEIA 144
Query: 186 RAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
RA G GM AGQ +DL E + +F+ + K G + S + G + GADDD ++
Sbjct: 145 RAAGCRGMIAGQVVDLLSENREIGVDDLKFMHDHKTGALIRASILAGAIMGGADDDTLKK 204
Query: 241 LRRYGRAVGVLYQVVDDILEA---KAQTPRDEEKKKKKGKS-YVAFYGVEKAMEVAEELR 296
L Y +G +QV DDIL+ + + +D GKS +V+ G+++++++ EL
Sbjct: 205 LSSYAEYLGFAFQVKDDILDILGDEMKIGKDIGSDMVNGKSTFVSVLGLQRSVDLINELT 264
Query: 297 AKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
KA LD F + G+ L + Y A+R+
Sbjct: 265 EKAINILDGFGEKGE---FLKNLTQYMAERD 292
>gi|33865276|ref|NP_896835.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 8102]
gi|33632445|emb|CAE07257.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 8102]
Length = 309
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/300 (39%), Positives = 172/300 (57%), Gaps = 21/300 (7%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
FD K Y ++Q L++++ + PE + E+MRYS+LA G KR P++C+AACEL G
Sbjct: 18 FDFKAYLAKAKATVEQALDQSLVPERPESLREAMRYSLLAGG-KRLRPILCLAACELAGG 76
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+ A PTA ALEM+H SLIHDDLP MDDD RRG+P+NH VYG +AILAGDAL
Sbjct: 77 DAAQAMPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGDALLTRA 136
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEK 214
F+ + +P VP R+L+V+ E++ G+ G+ GQ +DLE E V E++
Sbjct: 137 FEMVALRSPG--VPPERLLKVVGELSLVAGAPGLVGGQVVDLESEGKEVDLETLEYIHLH 194
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKK 274
K G + + G + GADD+ I +LR Y R +G+ +Q++DDIL+ A + E K
Sbjct: 195 KTGALLSACVITGAMIGGADDELIAALRVYARGIGLAFQIIDDILDITASS---EVLGKT 251
Query: 275 KGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
GK +A G+E++ + A +L +AK L K + PL + DY R+
Sbjct: 252 AGKDLIADKTTYPKLLGLEESRKRAADLVQEAKGVL---KPWASKAQPLLALADYITSRD 308
>gi|20807745|ref|NP_622916.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
tengcongensis MB4]
gi|20516298|gb|AAM24520.1| Geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
tengcongensis MB4]
Length = 294
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/295 (37%), Positives = 169/295 (57%), Gaps = 14/295 (4%)
Query: 42 LKTYWTTLITEIDQNLEKAITVK-YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVN 100
K + L +++ L + + V+ PE IYE+MRYSV A G KR PV+C++ACEL G +
Sbjct: 2 FKEKFKNLQQMVEEELHRILDVQEKPEIIYEAMRYSVFA-GGKRLRPVLCLSACELLGGD 60
Query: 101 RIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGF 160
A P AC++E++H SLIHDDLP MD+D RRG+P+NH V+G IAILAGD L LG+
Sbjct: 61 LKKALPVACSIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEAIAILAGDGLLNLGY 120
Query: 161 QHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN-----LVEFVQEKK 215
+ ++ H + ++L+ EIA A G G+ GQ D+ + ++++ E K
Sbjct: 121 EVLIRHALENPEDYEKILKAANEIATASGCKGIIGGQVEDILSQNTELTYEELKYIHEHK 180
Query: 216 FGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK---K 272
+ E S G +AGA + E++ LR Y +G+ +Q+ DDIL+ +K
Sbjct: 181 TAALIEASVCAGAHMAGASEKEVELLREYAGLIGLAFQIKDDILDVIGDEKTLGKKVGSD 240
Query: 273 KKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
++KGK ++V +GVEK+ E+ +EL +A + LD F G+ L +Y +R
Sbjct: 241 REKGKFTFVNIFGVEKSQEMVKELTDEAIKILDTF---GERAQFLKDLSNYLIER 292
>gi|253701624|ref|YP_003022813.1| polyprenyl synthetase [Geobacter sp. M21]
gi|251776474|gb|ACT19055.1| Polyprenyl synthetase [Geobacter sp. M21]
Length = 295
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 117/293 (39%), Positives = 161/293 (54%), Gaps = 15/293 (5%)
Query: 40 FDLKTYWTTLITEIDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
DLK Y +DQ+LE+ + + P ++ SMRYSV A G KR PV+ +AACE
Sbjct: 1 MDLKQYLKQKCELVDQSLERFLPHGKELPASLHGSMRYSVFAGG-KRVRPVLLLAACEAV 59
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G A P ACA+EM+H SLIHDDLP MD+D RRG P+NH VYG AILAGDAL
Sbjct: 60 GGALKPALPAACAMEMIHTYSLIHDDLPAMDNDDFRRGNPTNHKVYGEATAILAGDALLT 119
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN------LVEFV 211
F ++S + P R LRVI EIA A GS GM GQ +D+E E + ++
Sbjct: 120 EAFI-LLSGNGEGVDPAAR-LRVIHEIAHASGSRGMVGGQMVDMESEGKHDIDMATLSYI 177
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP---RD 268
K G + S G L GAD++ +L RY A+G+ +Q+ DD+L+ + T +D
Sbjct: 178 HTHKTGALIRASVRAGAILGGADEEAFDALTRYADAIGLAFQIADDVLDVEGTTEELGKD 237
Query: 269 EEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+ +GK +Y A G+E + AEEL A L+ F + + + + S+I
Sbjct: 238 AGSDQARGKATYPALVGLEASKRRAEELVQIALTALEPFDERAEPLRAIASYI 290
>gi|87124785|ref|ZP_01080633.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9917]
gi|86167664|gb|EAQ68923.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9917]
Length = 315
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 125/315 (39%), Positives = 176/315 (55%), Gaps = 23/315 (7%)
Query: 26 SLPVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRA 85
S P + A+Q FD Y E++ L+ ++ + PE + E+MRYS+LA G KR
Sbjct: 10 SAPPAGAAQ----GFDFNAYLAARKAEVESALDASLPPERPESLREAMRYSLLAGG-KRL 64
Query: 86 PPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGV 145
P++C+AACEL G + A PTA ALEM+H SLIHDDLP MDDD RRG+P+NH VYG
Sbjct: 65 RPILCLAACELAGGDPALAMPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGE 124
Query: 146 DIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP 205
+AILAGDAL F+ + +P VP R+L+V+AE++ G+ G+ GQ +DLE E
Sbjct: 125 AVAILAGDALLTRAFEMVALRSPG--VPAERLLQVVAELSLVAGAPGLVGGQVVDLESEG 182
Query: 206 NLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILE 260
V E++ K G + + G +AGAD I SLR Y R +G+ +Q+VDDIL+
Sbjct: 183 KQVDLETLEYIHLHKTGALLRACVITGALIAGADASRIDSLRTYARGIGLAFQIVDDILD 242
Query: 261 AKAQTPRDEEKKKKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYG-DN 312
A + + K GK +A G+E++ + A+ L +AK L FK
Sbjct: 243 VTASS---DVLGKTAGKDLIADKTTYPKLLGLEESRQRAKALVEEAKASLAAFKPTEPAK 299
Query: 313 VLPLYSFIDYAADRE 327
PL + DY R+
Sbjct: 300 ASPLLALADYVIGRD 314
>gi|197117645|ref|YP_002138072.1| trans-isoprenyl diphosphate synthase [Geobacter bemidjiensis Bem]
gi|197087005|gb|ACH38276.1| trans-isoprenyl diphosphate synthase [Geobacter bemidjiensis Bem]
Length = 295
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 116/293 (39%), Positives = 161/293 (54%), Gaps = 15/293 (5%)
Query: 40 FDLKTYWTTLITEIDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
DLK Y +DQ LE+ + + P ++ SMRYSV A G KR PV+ +AACE
Sbjct: 1 MDLKQYLKQKCELVDQALERFLPHGKELPASLHGSMRYSVFAGG-KRVRPVLLLAACEAV 59
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G +A P ACA+EM+H SLIHDDLP MD+D RRG P+NH VYG AILAGDAL
Sbjct: 60 GGELNSALPAACAMEMIHTYSLIHDDLPAMDNDDFRRGNPTNHKVYGEATAILAGDALLT 119
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN------LVEFV 211
F ++S + P R LRVI EIA A GS GM GQ +D+E E + ++
Sbjct: 120 EAFI-LLSCNGEGMEPGAR-LRVIHEIAHASGSRGMVGGQMVDMESEGKHDIDMATLSYI 177
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP---RD 268
K G + S G L GA+++ +L RY A+G+ +Q+ DD+L+ + T +D
Sbjct: 178 HTHKTGALIRASVRAGAILGGANEETFDALTRYADAIGLAFQIADDVLDVEGTTEELGKD 237
Query: 269 EEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+ +GK +Y A G+E + AEEL A L+ F + + + + S+I
Sbjct: 238 AGSDQARGKATYPALVGLEASKRRAEELVQIALNALEPFDERAEPLRAIASYI 290
>gi|78213443|ref|YP_382222.1| farnesyl-diphosphate synthase [Synechococcus sp. CC9605]
gi|78197902|gb|ABB35667.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CC9605]
Length = 296
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 116/303 (38%), Positives = 174/303 (57%), Gaps = 21/303 (6%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
S +FD K Y +++ L+ ++ + PE + E+MRYS+LA G KR P++C+AACEL
Sbjct: 2 SAEFDFKAYLGKAKEQVEAALDGSLGPERPESLREAMRYSLLAGG-KRLRPILCLAACEL 60
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
G A PTA ALEM+H SLIHDDLP MDDD RRG+P+NH VYG +AILAGDAL
Sbjct: 61 AGGEATQALPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGDALL 120
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFV 211
F+ + +P VP R+L+V+ E++ G+ G+ GQ +DLE E V E++
Sbjct: 121 TRAFEMVALRSPG--VPAERLLKVVGELSLVAGAPGLVGGQVVDLESEGKEVDLETLEYI 178
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
K G + + G + GAD+ I++LR Y R +G+ +Q++DDIL+ A + E
Sbjct: 179 HLHKTGALLSACVITGAMIGGADEALIKALRTYARGIGLAFQIIDDILDITASS---EVL 235
Query: 272 KKKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAA 324
K GK +A G++++ A+ L +AKE L + + + +PL + D+
Sbjct: 236 GKTAGKDLIADKTTYPKLLGLDESRRRADALVNEAKESL---QPWAEKAVPLLALADFIT 292
Query: 325 DRE 327
R+
Sbjct: 293 SRD 295
>gi|296133204|ref|YP_003640451.1| polyprenyl synthetase [Thermincola potens JR]
gi|296031782|gb|ADG82550.1| Polyprenyl synthetase [Thermincola potens JR]
Length = 299
Score = 190 bits (482), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 111/264 (42%), Positives = 160/264 (60%), Gaps = 24/264 (9%)
Query: 64 KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDD 123
+YPE I++SMRYS+LA G KR PV+ +AA E G + P ACA+EM+H SLIHDD
Sbjct: 30 EYPETIHQSMRYSMLA-GGKRLRPVLVLAAAEAVGGDVKKVIPAACAIEMIHTYSLIHDD 88
Query: 124 LPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEP-----RVL 178
LP MDDD RRG+P+NH VYG IAILAGDAL L F+ + S LV EP +VL
Sbjct: 89 LPAMDDDNYRRGKPTNHVVYGEAIAILAGDALLTLAFEVLSS-----LVEEPGIDPQKVL 143
Query: 179 RVIAEIARAVGSTGMAAGQFLDLEGEPNL------VEFVQEKKFGEMSECSAVCGGFLAG 232
RVI EI+ A GS G+ GQ +D+ G NL ++++ K G + + + G L+
Sbjct: 144 RVIKEISLAAGSRGLIGGQVVDI-GSENLDISAETLKYIHIHKTGALFKAALKTGAILSS 202
Query: 233 ADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYVAFYGVEK 287
A +++I +L RY +G+ +Q+ DDIL+ + T P + KKKK +Y + +G+++
Sbjct: 203 ASEEQITALSRYAHFLGLGFQITDDILDIEGDTEKLGKPVGSDIKKKKA-TYPSIFGLQE 261
Query: 288 AMEVAEELRAKAKEELDRFKKYGD 311
A ++A E A++ L+ F + D
Sbjct: 262 AKQMAREAVAESLMSLEGFDERAD 285
>gi|37519985|ref|NP_923362.1| geranylgeranyl pyrophosphate synthase [Gloeobacter violaceus PCC
7421]
gi|35210977|dbj|BAC88357.1| geranylgeranyl pyrophosphate synthase [Gloeobacter violaceus PCC
7421]
Length = 295
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/301 (39%), Positives = 172/301 (57%), Gaps = 21/301 (6%)
Query: 38 TQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
+QFDL Y ++++ L++ + +YP+++YE+MRYS+LA G KR P++C+ +C +
Sbjct: 2 SQFDLDAYLRQCRSQVEAALDRYLPQQYPDKLYEAMRYSLLAGG-KRLRPILCLTSCRMS 60
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G + A PTACALEMVH SLIHDDLP MDDD RRG+ +NH VYG D+AILAGDAL
Sbjct: 61 GGSADLAMPTACALEMVHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEDMAILAGDALLA 120
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQ 212
FQ I T PE RV+ V+ + +A G+ GQ +DLE E + E++
Sbjct: 121 YAFQLIAEKTVGA-QPE-RVVEVLGRLGKAASGAGLVGGQVVDLESEGRTITLETLEYIH 178
Query: 213 EKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKK 272
K G + E S + G LAGAD ++ L RY R +G+ +Q+ DD+L+ T E
Sbjct: 179 THKTGALLEVSVISGAILAGADGGVVERLTRYSRCIGLAFQIRDDLLDI---TATQAELG 235
Query: 273 KKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAAD 325
K GK +Y + G + A + AE+LR +A EL F G + PL + ++
Sbjct: 236 KTAGKDLRDRKATYPSLLGYDGARDRAEQLREQAVAELADF---GASARPLTALAEFIVQ 292
Query: 326 R 326
R
Sbjct: 293 R 293
>gi|375332057|gb|AFA52568.1| farnesyltransferase [Vaucheria litorea]
Length = 349
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/325 (36%), Positives = 174/325 (53%), Gaps = 27/325 (8%)
Query: 17 PRKFPVRCS------SLPVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAIT--VKYPEQ 68
P K +R + SL S A ST FD+K Y +D+ L + I E+
Sbjct: 26 PSKGTIRSAPLTKSISLKQSVAPATSSTTFDIKKYLYEKKVIVDKALSECIVPIGAENEK 85
Query: 69 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMD 128
+ ESM YS+LA G KR P++C+A+ E+FG + PTA ALEM+H+ SL+HDDLP MD
Sbjct: 86 LCESMNYSLLAGG-KRVRPILCIASSEIFGGEIESTLPTALALEMIHSMSLVHDDLPAMD 144
Query: 129 DDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAV 188
+D RRG+P+NH VYG +AILAGDAL F+ + HT V RV+ V+A + V
Sbjct: 145 NDDLRRGKPTNHVVYGEALAILAGDALLSKSFEIVAKHTKG--VDAERVVDVLARLGECV 202
Query: 189 GSTGMAAGQFLDLEGEPN------LVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLR 242
G G+A GQ +DLE E + ++ + K G + + + G L GA+ E++++
Sbjct: 203 GEVGLAGGQAMDLELEGKEDTTLEQLRWIHKHKTGALLKAACTTGAVLGGAEPSEVEAIE 262
Query: 243 RYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEEL 295
R+ ++G+ +QV DDIL+ T E+ K GK +YV G++ A + A+ L
Sbjct: 263 RFSESIGLAFQVADDILDC---TQTSEQLGKTAGKDEAVSKTTYVKLLGMDGARKEAKRL 319
Query: 296 RAKAKEELDRFKKYGDNVLPLYSFI 320
A L+ F + + + FI
Sbjct: 320 VDDALAALEPFGSRAEALKAIAHFI 344
>gi|242050680|ref|XP_002463084.1| hypothetical protein SORBIDRAFT_02g037510 [Sorghum bicolor]
gi|241926461|gb|EER99605.1| hypothetical protein SORBIDRAFT_02g037510 [Sorghum bicolor]
Length = 371
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 131/309 (42%), Positives = 181/309 (58%), Gaps = 26/309 (8%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITV-KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
+FD K Y +++ L+ AI + P ++++MRY++LA G KR P +C+AAC +
Sbjct: 68 EFDFKAYMGERAVAVNRALDAAIPAGEPPAALHDAMRYALLA-GGKRVRPALCLAACAVV 126
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G A P A A+EMVH SL+HDDLPCMDDD RRG+P+ H VYG IA+LAGDAL
Sbjct: 127 GGPEAWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGDALLS 186
Query: 158 LGFQHI--VSHTPPHLVPE---PRVLRVIAEIARAVGSTGMAAGQFLDLE----GEP--- 205
L F H+ V PP + PE RV+R I E+AR +GS G+ AGQ +DLE EP
Sbjct: 187 LSFHHMASVGSYPPDVDPEKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGTSEPVPL 246
Query: 206 NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT 265
+E++ K + E S V G + G D++I+ LR+Y R++G+L+QVVDDIL+ T
Sbjct: 247 ERLEYIHLHKTAALLEASVVIGAIIGGGTDEQIERLRKYARSIGLLFQVVDDILDV---T 303
Query: 266 PRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYS 318
EE K GK +Y G+EK+ E AE+L + A E+LD F K + PL
Sbjct: 304 KSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDAIEQLDCFDK--EKAAPLLH 361
Query: 319 FIDYAADRE 327
+Y A R+
Sbjct: 362 LANYIAHRQ 370
>gi|406980661|gb|EKE02234.1| Polyprenyl synthetase [uncultured bacterium]
Length = 302
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/262 (38%), Positives = 159/262 (60%), Gaps = 15/262 (5%)
Query: 53 IDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALE 112
I+ LEK + ++YP+ I+ESMRY+ L+ G KR PV+ + + G N PTACA+E
Sbjct: 22 INTYLEKYLEIRYPQIIWESMRYTTLSDG-KRIRPVLALESARACGGNIENVIPTACAIE 80
Query: 113 MVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLV 172
M+HA SLIHDDLPCMD+D RRG+ +NH VYG A+LAGDAL Q I+ HTP + V
Sbjct: 81 MIHAQSLIHDDLPCMDNDDYRRGRLTNHKVYGEAFAVLAGDALLSYAPQIIIQHTPAY-V 139
Query: 173 PEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVE-----FVQEKKFGEMSECSAVCG 227
+ +V+ E+A A G+ G+ GQ +D++ E ++ ++ K GE+ + + G
Sbjct: 140 DRDLLFQVLEELAIAAGALGLIGGQVIDIDSENKEIDIPTFNYIHTHKTGELFKFAMRSG 199
Query: 228 GFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL------EAKAQTPRDEEKKKKKGKSYVA 281
L+ A D++++ L YGR VG +Q+ DDIL E+ +TP ++ KK ++ +
Sbjct: 200 ALLSQATDEQLEILTEYGRLVGYAFQIADDILDITGTKESLGKTPGKDKLAKK--NTHPS 257
Query: 282 FYGVEKAMEVAEELRAKAKEEL 303
+G+ ++ E E+L +KA++ L
Sbjct: 258 LFGLSQSKEEVEQLCSKAQQIL 279
>gi|33861626|ref|NP_893187.1| polyprenyl synthetase [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
gi|33634203|emb|CAE19529.1| Polyprenyl synthetase [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 300
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/296 (37%), Positives = 167/296 (56%), Gaps = 15/296 (5%)
Query: 41 DLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVN 100
D + Y T +++ L+ ++ + PE + ESMRYS+LA G KR P++C+A+C L G
Sbjct: 10 DFEKYLTDTKKVVEEALDFSLGPENPEILRESMRYSLLAGG-KRIRPILCLASCSLAGGE 68
Query: 101 RIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGF 160
A PTA A+EM+H SLIHDDLP MD+D RRG+P+NH VYG IAILAGDAL F
Sbjct: 69 PSLAVPTAVAIEMIHTMSLIHDDLPAMDNDGFRRGRPTNHKVYGDAIAILAGDALLTRAF 128
Query: 161 QHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKK 215
+ + +P V R+L V+ E++ G+ G+ GQ +DLE E V E++ K
Sbjct: 129 EMVSLRSPG--VDSNRLLNVVGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEYIHLHK 186
Query: 216 FGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKK 275
G + + S G +AGA+++ + +L Y +G+ +Q++DDIL+ T E+ K
Sbjct: 187 TGALLKASVRTGAMIAGANEELLNALTTYAEGIGLAFQIIDDILDL---TSSSEKLGKTA 243
Query: 276 GKSYVAFYGVEKAMEVAEELRAKAKEELDRFKK----YGDNVLPLYSFIDYAADRE 327
GK +A + EE + KA + +D+ KK +G N L S D+ +R+
Sbjct: 244 GKDLLADKTTYPKLLGMEESKKKAFDLVDQAKKAIEPWGLNAKYLISLADFITNRD 299
>gi|260434296|ref|ZP_05788266.1| geranyltranstransferase [Synechococcus sp. WH 8109]
gi|260412170|gb|EEX05466.1| geranyltranstransferase [Synechococcus sp. WH 8109]
Length = 296
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 115/303 (37%), Positives = 172/303 (56%), Gaps = 21/303 (6%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
S +FD K Y ++ L+ ++ + PE + E+MRYS+LA G KR P++C+AACEL
Sbjct: 2 SAEFDFKAYLGKAKERVEAALDGSLGPERPESLREAMRYSLLAGG-KRLRPILCLAACEL 60
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
G A PTA ALEM+H SLIHDDLP MDDD RRG+P+NH VYG +AILAGDAL
Sbjct: 61 AGGEATQALPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGDALL 120
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFV 211
F+ + +P VP R+L+V+ E++ G+ G+ GQ +DLE E V E++
Sbjct: 121 TRAFEMVALRSPD--VPAERLLKVVGELSLVAGAPGLVGGQVVDLESEGKEVDLETLEYI 178
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
K G + + G + GAD+ I++LR Y R +G+ +Q++DDIL+ A + +
Sbjct: 179 HLHKTGALLSACVITGAIIGGADEALIKALRTYARGIGLAFQIIDDILDITASS---DVL 235
Query: 272 KKKKGKSYVA-------FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAA 324
K GK +A G++++ A+ L AKE L + + + +PL + D+
Sbjct: 236 GKTAGKDLIADKTTYPKLLGLDESRRRADALVNAAKEAL---QPWAEKAIPLLALADFIT 292
Query: 325 DRE 327
R+
Sbjct: 293 SRD 295
>gi|116071037|ref|ZP_01468306.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. BL107]
gi|116066442|gb|EAU72199.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. BL107]
Length = 296
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 115/303 (37%), Positives = 174/303 (57%), Gaps = 21/303 (6%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
+ +FD K Y ++ L+ ++ + PE + ++MRYS+LA G KR P++C+AACEL
Sbjct: 2 TAEFDFKAYLGKAKETVEAALDDSLGPERPESLRDAMRYSLLAGG-KRLRPILCLAACEL 60
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
G + A PTA ALEM+H SLIHDDLP MDDD RRG+P+NH VYG +AILAGDAL
Sbjct: 61 AGGDAKHAVPTAVALEMIHTMSLIHDDLPAMDDDDVRRGRPTNHKVYGEAVAILAGDALL 120
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFV 211
F+ + +P VP ++L+V+ E++ G+ G+ GQ +DLE E V E++
Sbjct: 121 TRAFEMVALRSPG--VPADQLLKVVGELSLVAGAPGLVGGQVVDLESEGKQVDLETLEYI 178
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
K G + + G + ADD I +LR Y R +G+ +Q++DDIL+ A + E
Sbjct: 179 HLHKTGALLSACVITGALIGNADDTLITALRTYARGIGLAFQIIDDILDITASS---EVL 235
Query: 272 KKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAA 324
K GK +Y G+E++ + A++L +AKE L + + D +PL + D+
Sbjct: 236 GKTAGKDLLADKTTYPKLLGLEESRKRADDLVREAKEAL---QPWSDQAMPLLALADFIT 292
Query: 325 DRE 327
R+
Sbjct: 293 SRD 295
>gi|452824591|gb|EME31593.1| geranylgeranyl pyrophosphate synthetase [Galdieria sulphuraria]
Length = 370
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 169/291 (58%), Gaps = 24/291 (8%)
Query: 53 IDQNLEKAITVKYPEQ--IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACA 110
I++ L ++I + P IYESMRYS+LA G KR P++C+A CELFG + + A PTA A
Sbjct: 89 IEEQLNRSIPLLDPRLGLIYESMRYSLLA-GGKRIRPMLCIATCELFGGSTLTATPTAVA 147
Query: 111 LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPH 170
LEM+H SLIHDDLP MD+D RRG+ +NH V+G DIAILAGDAL F++I + T
Sbjct: 148 LEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDALLARAFEYIANETQG- 206
Query: 171 LVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQEKKFGEMSECSA 224
VP VL+VI+ + +VG +G+ GQ +D+ EG+ + + ++ + K G + +C
Sbjct: 207 -VPAEVVLKVISFLGASVGYSGIVGGQVVDILSEGKKEVSIDDLIWIHKHKTGALLKCCV 265
Query: 225 VCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK------- 277
V G L GA ++++ + + +G+ +QV DDIL+ A EE K GK
Sbjct: 266 VTGALLGGAKEEDVIRVGEFAERIGLAFQVADDILDVTASF---EELGKSIGKDERSDKA 322
Query: 278 SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
++ G+E++ AE+L ++K ++ YG L + DY R +
Sbjct: 323 TFPRLMGLEESKRFAEKLVQESKYLIE---PYGKRAYYLEALADYIVSRSY 370
>gi|46310089|gb|AAS87323.1| geranylgeranyl pyrophosphate synthetase [Taxus wallichiana var.
chinensis]
Length = 207
Score = 187 bits (474), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 129/211 (61%), Gaps = 17/211 (8%)
Query: 109 CALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTP 168
CA+EM+H SLIHDDLP MD+D RRG+P+NH V+G D A+LAGDAL F+HI T
Sbjct: 1 CAMEMIHTMSLIHDDLPRMDNDDFRRGKPTNHKVFGEDTAVLAGDALLSFAFEHIAVATS 60
Query: 169 PHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQEKKFGEMSEC 222
VP R LRVI+E+ + +GS G+ GQ +D+ EG+ N+ +E++ K + EC
Sbjct: 61 K-TVPSDRTLRVISELGKTIGSQGLVGGQVVDITSEGDANVDLKTLEWIHIHKTAVLLEC 119
Query: 223 SAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK----- 277
S V GG L GA +DEI +RRY R VG+L+QV+DDIL+ T EE K GK
Sbjct: 120 SVVSGGILGGATEDEIARIRRYARCVGLLFQVMDDILDV---TKSSEELGKTAGKDLLTD 176
Query: 278 --SYVAFYGVEKAMEVAEELRAKAKEELDRF 306
+Y G+EKA E A EL KA E L F
Sbjct: 177 KATYPKLMGLEKAKEFAAELATKAXEXLSSF 207
>gi|78184316|ref|YP_376751.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CC9902]
gi|78168610|gb|ABB25707.1| farnesyl-diphosphate synthase [Synechococcus sp. CC9902]
Length = 296
Score = 187 bits (474), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 115/303 (37%), Positives = 173/303 (57%), Gaps = 21/303 (6%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
+ +FD K Y ++ L+ ++ + PE + ++MRYS+LA G KR P++C+AACEL
Sbjct: 2 TAEFDFKAYLGKAKDTVEAALDDSLGPERPESLRDAMRYSLLAGG-KRLRPILCLAACEL 60
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
G A PTA ALEM+H SLIHDDLP MDDD RRG+P+NH VYG +AILAGDAL
Sbjct: 61 AGGEAKHAVPTAVALEMIHTMSLIHDDLPAMDDDDVRRGRPTNHKVYGEAVAILAGDALL 120
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFV 211
F+ + +P VP R+L+V+ E++ G+ G+ GQ +DLE E V E++
Sbjct: 121 TRAFEMVALRSPG--VPAERLLKVVGELSLVAGAPGLVGGQVVDLESEGKQVDLETLEYI 178
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
K G + + G + ADD I +LR Y R +G+ +Q++DDIL+ A + E
Sbjct: 179 HLHKTGALLSACVITGALIGNADDTLITALRTYARGIGLAFQIIDDILDITASS---EVL 235
Query: 272 KKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAA 324
K GK +Y G+E++ + A++L +AKE L + + + +PL + D+
Sbjct: 236 GKTAGKDLLADKTTYPKLLGLEESRKRADDLVREAKEAL---QPWSEQAMPLLALADFIT 292
Query: 325 DRE 327
R+
Sbjct: 293 SRD 295
>gi|126696514|ref|YP_001091400.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9301]
gi|126543557|gb|ABO17799.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9301]
Length = 299
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/295 (36%), Positives = 170/295 (57%), Gaps = 18/295 (6%)
Query: 38 TQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
+D + Y I++ L+ ++ + PE + ESMRYS+LA G KR P++C+A+C L
Sbjct: 6 NSYDFEKYLKQTKKVIEEALDFSLGPENPEILRESMRYSLLAGG-KRIRPILCLASCSLA 64
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G A PTA A+EM+H SLIHDDLP MD+D RRG+P+NH VYG +AILAGDAL
Sbjct: 65 GGEPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGDALLT 124
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP-----NLVEFVQ 212
F+ +VS P + P R+L VI E++ G+ G+ GQ +DLE E + +E++
Sbjct: 125 RAFE-MVSLRSPGVDPN-RLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLDTLEYIH 182
Query: 213 EKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKK 272
K G + + G +AGA++ +Q+L Y +G+ +Q++DDIL+ T E+
Sbjct: 183 LHKTGALLKACVRTGAMIAGANEKLLQALTTYAEGIGLAFQIIDDILDL---TSSSEKLG 239
Query: 273 KKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
K GK +Y G+E++ + A +L KAK+ ++ + ++++ L FI
Sbjct: 240 KTAGKDLLADKTTYPKLLGMEESKKRAFDLVEKAKKAIEPWGADANHLISLADFI 294
>gi|357122245|ref|XP_003562826.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Brachypodium distachyon]
Length = 356
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 130/309 (42%), Positives = 178/309 (57%), Gaps = 26/309 (8%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITV-KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
+FD K Y ++Q L+ AI + P ++++MRY++LA G KR P +C+A+C +
Sbjct: 53 EFDFKAYMGERAVAVNQALDAAIPAGEPPAALHDAMRYALLA-GGKRVRPALCLASCVVV 111
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G A A A+EMVH SL+HDDLPCMDDD RRG+P+ H VYG IA+LAGDAL
Sbjct: 112 GGREAWAMAPAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGDALLS 171
Query: 158 LGFQHIVS--HTPPHLVPE---PRVLRVIAEIARAVGSTGMAAGQFLDLE--GEPNLV-- 208
L F H+ S PP + PE RV+R I E+AR +GS G+ AGQ +DLE G V
Sbjct: 172 LSFGHMASMDSYPPDVDPEKHPARVVRGIGELARCIGSEGLVAGQVVDLEMTGSTETVPL 231
Query: 209 ---EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT 265
E++ K + E S V G + G D++I+ LR+Y R++G+L+QVVDDIL+ T
Sbjct: 232 DRLEYIHLHKTAALLEASVVIGAIIGGGSDEQIERLRKYARSIGLLFQVVDDILDV---T 288
Query: 266 PRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYS 318
EE K GK +Y G+EK+ E AE+L AKE+L F K + PL
Sbjct: 289 KSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLCDAKEQLADFDK--EKAAPLLY 346
Query: 319 FIDYAADRE 327
+Y A R+
Sbjct: 347 LANYIAYRQ 355
>gi|21592547|gb|AAM64496.1| putative geranylgeranyl pyrophosphate synthase GGPS3 [Arabidopsis
thaliana]
Length = 360
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/306 (41%), Positives = 184/306 (60%), Gaps = 22/306 (7%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
++ FD K Y ++ L+ ++ ++ P + E++RYS+LA G KR P++C+A CEL
Sbjct: 61 NSAFDFKLYMIRKAESVNAALDVSVPLREPLTVQEAVRYSLLAGG-KRVRPLLCIAVCEL 119
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
G + A ACA+EM+H +SLIHDDLPCMD+ RRG+P+NH VYG D+A+LAGDAL
Sbjct: 120 VGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALL 179
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE---PNLV----- 208
L F+H+ + + PE R++R + E+ARA+G+TG+ AGQ +DL E P+ V
Sbjct: 180 ALAFEHMTVVSSGLVAPE-RMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHL 238
Query: 209 EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRD 268
EF+ K + E +AV G + G ++EI+ LR+Y R +G+L+QVVDDI + T
Sbjct: 239 EFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDIPDVTKST--- 295
Query: 269 EEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFID 321
EE K GK +Y G+E++ EVAEELR +A+E+L F PL +
Sbjct: 296 EELGKTAGKDVMAGKLTYPRLIGLERSKEVAEELRREAEEQLLGFDP--SKAAPLVALAS 353
Query: 322 YAADRE 327
Y A R
Sbjct: 354 YIACRH 359
>gi|157413540|ref|YP_001484406.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9215]
gi|157388115|gb|ABV50820.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9215]
Length = 300
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/307 (35%), Positives = 173/307 (56%), Gaps = 21/307 (6%)
Query: 33 SQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVA 92
+++ ++ D + Y +++ L+ ++ + PE + ESMRYS+LA G KR P++C+A
Sbjct: 2 TEIINSISDFEKYLKNTKKVVEEALDVSLGPENPEILRESMRYSLLAGG-KRIRPILCLA 60
Query: 93 ACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAG 152
+C L G A PTA A+EM+H SLIHDDLP MD+D RRG+P+NH VYG IAILAG
Sbjct: 61 SCSLAGGEPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAG 120
Query: 153 DALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV---- 208
DAL F+ + +P V R+L VI E++ G+ G+ GQ +DLE E V
Sbjct: 121 DALLTRAFEMVSLRSPG--VDPTRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLET 178
Query: 209 -EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPR 267
E++ K G + + G +AGA++ +Q+L Y +G+ +Q++DDIL+ T
Sbjct: 179 LEYIHLHKTGALLKACVRTGAMIAGANEKLLQALTTYAEGIGLAFQIIDDILDL---TSS 235
Query: 268 DEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
E+ K GK +Y G+E++ + A +L KAK+ ++ +G + L S
Sbjct: 236 SEKLGKTAGKDLLADKTTYPKLLGMEESKKRAFDLVEKAKKAIE---PWGSDAKYLISLA 292
Query: 321 DYAADRE 327
D+ +R+
Sbjct: 293 DFITNRD 299
>gi|78779464|ref|YP_397576.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9312]
gi|78712963|gb|ABB50140.1| farnesyl-diphosphate synthase [Prochlorococcus marinus str. MIT
9312]
Length = 300
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/303 (36%), Positives = 169/303 (55%), Gaps = 21/303 (6%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
S D + Y +++ L+ ++ + PE + ESMRYS+LA G KR P++C+A+C L
Sbjct: 6 SNISDFEEYLKNAKKVVEEALDFSLGPENPEILRESMRYSLLAGG-KRIRPILCLASCSL 64
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
G A PTA A+EM+H SLIHDDLP MD+D RRG+P+NH VYG IAILAGDAL
Sbjct: 65 AGGEPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGDALL 124
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFV 211
F+ + +P V R+L VI E++ G+ G+ GQ +DLE E V E++
Sbjct: 125 TRAFEMVSLRSPG--VDPTRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEYI 182
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
K G + + G +AGA+++ +Q+L Y +G+ +Q++DDIL+ T E+
Sbjct: 183 HLHKTGALLKACVRTGAMIAGANEETLQALTTYAEGIGLAFQIIDDILDL---TSSSEKL 239
Query: 272 KKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAA 324
K GK +Y G+E++ + A +L AK+ + K +G + L S D+
Sbjct: 240 GKTAGKDLLADKTTYPKLLGMEESKKRAFDLVENAKKAI---KPWGADAKYLISLADFIT 296
Query: 325 DRE 327
+R+
Sbjct: 297 NRD 299
>gi|254526220|ref|ZP_05138272.1| geranylgeranyl pyrophosphate synthetase [Prochlorococcus marinus
str. MIT 9202]
gi|221537644|gb|EEE40097.1| geranylgeranyl pyrophosphate synthetase [Prochlorococcus marinus
str. MIT 9202]
Length = 300
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 110/307 (35%), Positives = 172/307 (56%), Gaps = 21/307 (6%)
Query: 33 SQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVA 92
+++ ++ D + Y +++ L+ ++ + PE + ESMRYS+LA G KR P++C+A
Sbjct: 2 TEIINSISDFEKYLKNTKKVVEEALDFSLGPENPEILRESMRYSLLAGG-KRIRPILCLA 60
Query: 93 ACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAG 152
+C L G A PTA A+EM+H SLIHDDLP MD+D RRG+P+NH VYG IAILAG
Sbjct: 61 SCSLAGGKPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAG 120
Query: 153 DALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV---- 208
DAL F+ + +P V R+L VI E++ G+ G+ GQ +DLE E V
Sbjct: 121 DALLTRAFEMVSLRSPG--VDPTRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLET 178
Query: 209 -EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPR 267
E++ K G + + G +AGA++ +Q+L Y +G+ +Q++DDIL+ T
Sbjct: 179 LEYIHLHKTGALLKACVRTGAMIAGANEKLLQALTTYAEGIGLAFQIIDDILDL---TSS 235
Query: 268 DEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
E+ K GK +Y G+E++ + A +L KAK+ ++ +G L S
Sbjct: 236 SEKLGKTAGKDLLADKTTYPKLLGMEESKKRAFDLVEKAKKAIE---PWGSEAKYLISLA 292
Query: 321 DYAADRE 327
D+ +R+
Sbjct: 293 DFITNRD 299
>gi|254431687|ref|ZP_05045390.1| polyprenyl synthetase [Cyanobium sp. PCC 7001]
gi|197626140|gb|EDY38699.1| polyprenyl synthetase [Cyanobium sp. PCC 7001]
Length = 321
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 123/312 (39%), Positives = 172/312 (55%), Gaps = 20/312 (6%)
Query: 28 PVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPP 87
PV + +Q FD Y ++ L+ A+ + PE + E+MRYS+LA G KR P
Sbjct: 17 PVISGTQ-APAGFDFPAYLEAARLRVEAALDAALGPERPESLREAMRYSLLAGG-KRLRP 74
Query: 88 VMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDI 147
++C+AACEL G A PTA ALEM+H SLIHDDLP MDDD RRG+P+NH VYG
Sbjct: 75 ILCLAACELAGGESERAMPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAN 134
Query: 148 AILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL 207
AILAGDAL F+ + + VP R+L V+ E++ A G+ G+ GQ +DLE E
Sbjct: 135 AILAGDALLTRAFEMVALRSSG--VPPERLLAVVGELSLASGAPGLVGGQVVDLECEGKT 192
Query: 208 V-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAK 262
V E++ K G + +CG +AGA D + +LR Y R +G+ +Q++DDIL+
Sbjct: 193 VDLDTLEYIHLHKTGALLRACVLCGALIAGAPDALLTALRTYARGIGLAFQIIDDILDVT 252
Query: 263 AQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLP 315
A + E K GK +Y G+E++ + A+ L +AKE L F G P
Sbjct: 253 ASS---EVLGKTAGKDLTADKTTYPKLLGLEESRQRAQALVLEAKEALAPFAA-GGRAAP 308
Query: 316 LYSFIDYAADRE 327
L + DY R+
Sbjct: 309 LLALADYITSRD 320
>gi|322418643|ref|YP_004197866.1| poluprenyl synthetase [Geobacter sp. M18]
gi|320125030|gb|ADW12590.1| Polyprenyl synthetase [Geobacter sp. M18]
Length = 295
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 114/293 (38%), Positives = 160/293 (54%), Gaps = 15/293 (5%)
Query: 40 FDLKTYWTTLITEIDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
DLK Y +DQ LE+ + + P ++ +MRYSV A G KR PV+ +AACE
Sbjct: 1 MDLKEYLKQKCQLVDQALERYLPDGKELPASLHGAMRYSVFA-GGKRVRPVLMLAACEAV 59
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G + A P ACA+EM+H SLIHDDLP MD+D RRG P+NH VYG AILAGDAL
Sbjct: 60 GGSPQAVMPAACAMEMIHTYSLIHDDLPAMDNDDFRRGNPTNHKVYGEATAILAGDALLT 119
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN------LVEFV 211
F ++S P R LRVI EIA A GS GM GQ +D+E E + ++
Sbjct: 120 EAFI-LLSANGEGGDPAAR-LRVIQEIAVASGSRGMVGGQVVDMESEGRHDVDLATLSYI 177
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP---RD 268
K G + S G + GA +++ ++L RY A+G+ +Q+ DDIL+ + T +D
Sbjct: 178 HTHKTGALIRASVRSGAIMGGASEEQFKALTRYADAIGLAFQIADDILDVEGTTEELGKD 237
Query: 269 EEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+ +GK +Y A G+E + A EL A + L+ F + + + S+I
Sbjct: 238 AGSDQARGKATYPALMGLEASKARARELVQIALDALEPFDLRAEPLRAIASYI 290
>gi|116748856|ref|YP_845543.1| polyprenyl synthetase [Syntrophobacter fumaroxidans MPOB]
gi|116697920|gb|ABK17108.1| farnesyl-diphosphate synthase [Syntrophobacter fumaroxidans MPOB]
Length = 296
Score = 183 bits (465), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 115/299 (38%), Positives = 161/299 (53%), Gaps = 27/299 (9%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYP------EQIYESMRYSVLAKGTKRAPPVMCVAA 93
FDLK Y + E Q +E A+ +P + + E+ RYS+ A G KR P++C+AA
Sbjct: 3 FDLKLY----LAERKQLVEDALEDCFPVPSGLEKSVLEAARYSLFA-GGKRLRPILCLAA 57
Query: 94 CELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGD 153
E+ G +R AA P ACALEM+H SLIHDDLP MD+D RRG+P+NH V+G IA+LAGD
Sbjct: 58 AEVAGGSREAAMPAACALEMIHTYSLIHDDLPAMDNDDFRRGKPTNHKVFGEAIAVLAGD 117
Query: 154 ALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN-----LV 208
AL F + +P ++L V+A + RA G GM GQ +DLE E V
Sbjct: 118 ALLTEAFDFVSKMDGD--IPPRKILAVVATLVRASGYRGMIGGQVIDLECENRTVDLATV 175
Query: 209 EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRD 268
E++ K G + S G L G D ++ SL+RYG +G+ +Q+ DD+L+ + R+
Sbjct: 176 EYMHIHKTGALLSASLEVGALLGGGSDAQVSSLKRYGHHLGLAFQITDDLLDVEGDA-RE 234
Query: 269 EEKK-----KKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
KK K K+Y A G+ ++ E A E A + L F D PL + Y
Sbjct: 235 MGKKPGSDAAKNKKTYPALLGITRSREAAREHVDAALQALAAFD---DRAEPLRAIARY 290
>gi|38455333|gb|AAR20832.1| geranylgeranyl diphosphate synthase [Taxus x media]
Length = 180
Score = 183 bits (465), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 119/178 (66%), Gaps = 8/178 (4%)
Query: 73 MRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPS 132
MRYS+LA G KR P +C+AACEL G ++ A PTACA+EM+H SLIHDDLPCMD+D
Sbjct: 1 MRYSLLAGG-KRVRPALCIAACELVGGSQDLAMPTACAMEMIHTMSLIHDDLPCMDNDDF 59
Query: 133 RRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTG 192
RRG+P+NH V+G D A+LAGDAL F+HI T VP R LRVI+E+ + + S G
Sbjct: 60 RRGKPTNHKVFGEDTAVLAGDALLSFAFEHIAVATSK-TVPSDRTLRVISELGKTISSQG 118
Query: 193 MAAGQFLDL--EGEPNL----VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRY 244
+ GQ +D+ EG+ N+ +E++ K + ECS V GG L GA +DEI +RRY
Sbjct: 119 LVGGQVVDITSEGDANVDLKTLEWIHIHKTAVLLECSVVNGGILGGATEDEIARIRRY 176
>gi|123966393|ref|YP_001011474.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9515]
gi|123200759|gb|ABM72367.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9515]
Length = 300
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 109/284 (38%), Positives = 165/284 (58%), Gaps = 15/284 (5%)
Query: 53 IDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALE 112
+++ L+ ++ + PE + ESMRYS+LA G KR P++C+A+C L G A PTA A+E
Sbjct: 22 VEEALDLSLGPENPEILRESMRYSLLAGG-KRIRPILCLASCSLAGGEPSLAVPTAVAIE 80
Query: 113 MVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLV 172
M+H SLIHDDLP MD+D RRG+P+NH VYG IAILAGDAL F+ +VS P +
Sbjct: 81 MIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRAFE-MVSLRSPGVD 139
Query: 173 PEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCG 227
P R+L VI E++ G+ G+ GQ +DLE E V E++ K G + + G
Sbjct: 140 PN-RLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEYIHLHKTGALLKACVRTG 198
Query: 228 GFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVAFYGVEK 287
+AGA+D+ +++L Y +G+ +Q++DDIL+ T E+ K GK +A
Sbjct: 199 AMIAGANDELLKALTTYAEGIGLAFQIIDDILDL---TSSSEKLGKTAGKDLLADKTTYP 255
Query: 288 AMEVAEELRAKAKEELDRFKK----YGDNVLPLYSFIDYAADRE 327
+ EE + +A + +D+ KK +G + L S D+ +R+
Sbjct: 256 KLLGMEESKKRAFDLVDKAKKAIEPWGLDAQYLISLADFITNRD 299
>gi|407473843|ref|YP_006788243.1| polyprenyl synthetase [Clostridium acidurici 9a]
gi|407050351|gb|AFS78396.1| polyprenyl synthetase [Clostridium acidurici 9a]
Length = 298
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/290 (37%), Positives = 160/290 (55%), Gaps = 21/290 (7%)
Query: 53 IDQNLEKAITVK--YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRI-AAFPTAC 109
I +NLEK + + + ESM+YS+LA G KR P++ + A EL + A P A
Sbjct: 14 IGKNLEKILPDNDCFQGTVCESMKYSILA-GGKRIRPILTLKAFELVSKSSFEKALPFAS 72
Query: 110 ALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPP 169
A+EM+H SLIHDDLP MD+D RRG+P+NH VYG +AILAGDAL ++ ++ P
Sbjct: 73 AIEMIHTYSLIHDDLPPMDNDDFRRGKPTNHKVYGEAMAILAGDALLNFAYETMIESIPE 132
Query: 170 HLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSA 224
++ I EI +A G GM GQ +D+ + N+ + F+ KK + E S
Sbjct: 133 TSKDVSGYIKAIKEIGKAAGVYGMIGGQVVDIISDENIMSEEQLRFIHNKKTSALIEASI 192
Query: 225 VCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPR-------DEEKKKKKGK 277
+ G FLA A D++I +L++YG A+G+ +Q+ DDIL+ + DE KK
Sbjct: 193 LSGAFLANASDNQIIALKKYGEAIGLCFQIRDDILDKIGDNEKLGKSVGSDEANKK---L 249
Query: 278 SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+Y+ YG+EK++E EL +A E LD F + + F +Y RE
Sbjct: 250 TYLTLYGMEKSIEKTHELCKEAIEALDIFD--SKDTIFFKQFAEYLVYRE 297
>gi|374639389|gb|AEZ55683.1| geranylgeranyl diphosphate synthase 3 [Salvia miltiorrhiza]
Length = 379
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 137/331 (41%), Positives = 196/331 (59%), Gaps = 24/331 (7%)
Query: 11 PPCVCLPRKFPVRCSSLPVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIY 70
PP + P+R +S Q + FD K Y I ++ L+ A+ +++P +++
Sbjct: 58 PPPLTHKLHTPIRFTS--NQTPDQNQKLVFDFKAYMLEKIAAVNAALDAALPLRHPAKLH 115
Query: 71 ESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDD 130
E+MRYS+L+ G KR P++C+AAC L G AA P+ACALEM+HA SLIHDDLPCMDDD
Sbjct: 116 EAMRYSLLS-GGKRVCPIVCLAACRLVGGEDAAAMPSACALEMIHAMSLIHDDLPCMDDD 174
Query: 131 PSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGS 190
RRG+PSNH V+G A+LAG AL F+HI + T VP R LRVI E+AR +G+
Sbjct: 175 DLRRGRPSNHKVFGEPAAVLAGYALIASAFEHIATATEG--VPAERTLRVIGEVARLIGA 232
Query: 191 TGMAAGQFLDLE---GEPNL----VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRR 243
G+ AGQ +DL G ++ +E++ K E +AV G L GA ++EI ++R
Sbjct: 233 EGVVAGQVVDLRSGGGGDDVGLEKLEYIHVHKTAAAVEAAAVAGAVLGGACEEEIGNVRI 292
Query: 244 YGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELR 296
Y R G+++QVVDD+L+ T EE K GK +Y GVEK+ EVAE L+
Sbjct: 293 YARRAGLMFQVVDDVLDVTKST---EELGKTAGKDVATGKATYPKLIGVEKSREVAENLK 349
Query: 297 AKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+A+E+L F++ PL + +D+ A R+
Sbjct: 350 REAQEQLLGFER--GRAAPLMALLDFIAYRD 378
>gi|408356541|ref|YP_006845072.1| polyprenyl diphosphate synthase [Amphibacillus xylanus NBRC 15112]
gi|407727312|dbj|BAM47310.1| polyprenyl diphosphate synthase [Amphibacillus xylanus NBRC 15112]
Length = 294
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 167/302 (55%), Gaps = 23/302 (7%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAI-TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
F+ + Y + I+ +L ++I + P + SM YS+ A G KR P++ +A+ E F
Sbjct: 2 NFNFRNYLEANLEFINHSLIESIEKLSIPSTLKASMLYSIKA-GGKRIRPILMIASVEAF 60
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G + P A ALE+VH SLIHDDLP MDDD RRGQP+NH +G AILAGD+L
Sbjct: 61 GGKKEDVLPAAIALELVHTYSLIHDDLPAMDDDNLRRGQPTNHIEFGEATAILAGDSLLT 120
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP---NLVEF--VQ 212
L FQ V +L E +V +I ++ A G TGM AGQ LDLE E NL E +
Sbjct: 121 LAFQ--VISEAENLTAEQKV-TIIKRLSMASGPTGMVAGQILDLEAEERQVNLSELEQIH 177
Query: 213 EKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPR----- 267
K GE+ + G +LAGA ++++++R +G +G+++Q+ DDIL+ + +
Sbjct: 178 RLKTGELLIFAVEIGAYLAGAAQEQLKAIREFGHHIGLIFQIQDDILDIEGDEQKLGKAV 237
Query: 268 --DEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAAD 325
D+E KK +Y G+E A++ +A+ L++ + L++FIDY ++
Sbjct: 238 GSDQENKK---STYPKLLGIEGALQAKAANIKQAEASLNQAQIANS---TLHAFIDYISN 291
Query: 326 RE 327
RE
Sbjct: 292 RE 293
>gi|253576322|ref|ZP_04853652.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251844215|gb|EES72233.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 302
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/280 (36%), Positives = 155/280 (55%), Gaps = 20/280 (7%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITVKY--PEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
Q ++ Y + + L ++ + PE + +M YS++A G KR P++ VAA E
Sbjct: 5 QLSIEAYMKEIAEAVSTRLSSSLPAAWQVPETLSRAMDYSLMA-GGKRLRPLLVVAAAEA 63
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
G +R AA P ACA+EMVH SLIHDDLP +D+D RRG+P+NH V+G +AILAGD L
Sbjct: 64 LGGSRDAAMPVACAVEMVHTYSLIHDDLPALDNDDFRRGKPTNHKVFGEAMAILAGDGLL 123
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVE-----FV 211
F +V + VP L ++ E++R G GM GQ D++GE + + ++
Sbjct: 124 THAFYSVVQASRKQGVPAEASLAIVEELSRFAGPGGMVGGQVADMQGEQGVTDLDQLRYI 183
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
E K G++ S GG +A + +++++L RYGRA+G +Q+ DDIL+ DE K
Sbjct: 184 HEHKTGDLIVFSVRAGGHIASGNAEQLEALERYGRALGHAFQIQDDILDLIG----DESK 239
Query: 272 KKKKGKS--------YVAFYGVEKAMEVAEELRAKAKEEL 303
KK +S Y F G+E + E L ++AK+ L
Sbjct: 240 LGKKTQSDVIQQKVTYPYFIGIEASRAEVERLTSEAKQAL 279
>gi|123968708|ref|YP_001009566.1| polyprenyl synthetase [Prochlorococcus marinus str. AS9601]
gi|123198818|gb|ABM70459.1| Polyprenyl synthetase [Prochlorococcus marinus str. AS9601]
Length = 300
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 108/299 (36%), Positives = 167/299 (55%), Gaps = 21/299 (7%)
Query: 41 DLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVN 100
D + Y +++ L+ ++ + PE + ESMRYS+LA G KR P++C+A+C L G
Sbjct: 10 DFEKYLKNTKKVVEEALDFSLGPENPEILRESMRYSLLAGG-KRIRPILCLASCSLAGGE 68
Query: 101 RIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGF 160
A PTA A+EM+H SLIHDDLP MD+D RRG+P+NH VYG IAILAGDAL F
Sbjct: 69 PSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRAF 128
Query: 161 QHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKK 215
+ + +P V R+L V+ E++ G+ G+ GQ +DLE E V E++ K
Sbjct: 129 EMVSLRSPG--VDPTRLLNVVGELSLVAGAPGLVGGQVVDLECEGKEVDLKTLEYIHLHK 186
Query: 216 FGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKK 275
G + + G +AGA++ + +L Y +G+ +Q++DDIL+ T E+ K
Sbjct: 187 TGALLKACVRTGAMIAGANEKLLHALTTYAEGIGLAFQIIDDILDL---TSSSEKLGKTA 243
Query: 276 GK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
GK +Y G+E++ + A +L KAK+ ++ +G + L S D+ +R+
Sbjct: 244 GKDLLADKTTYPKLLGMEESKKRAFDLVEKAKKAIE---PWGPDAKYLISLADFITNRD 299
>gi|302819480|ref|XP_002991410.1| hypothetical protein SELMODRAFT_133501 [Selaginella moellendorffii]
gi|300140803|gb|EFJ07522.1| hypothetical protein SELMODRAFT_133501 [Selaginella moellendorffii]
Length = 328
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 113/319 (35%), Positives = 177/319 (55%), Gaps = 34/319 (10%)
Query: 30 SAASQLRSTQFDLKTYWTTLITEIDQNLEKAIT--VKYPE--QIYESMRYSVLAKGTKRA 85
++AS + +FD Y + + +++ A+ K PE Q++E+MRY+ L++G +
Sbjct: 21 TSASSTKPNKFDYDLYVKSKFKAVSISIQHALPPPFKRPETLQLHEAMRYA-LSQG-RLM 78
Query: 86 PPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGV 145
++C+AACEL G ++ A P ACA+EM+ ++ + DDLP +D+ R G+P+ H +G+
Sbjct: 79 CAIVCIAACELVGGSQDDAMPGACAVEMIKTSTCVQDDLPSIDNAELRDGKPTVHCAFGI 138
Query: 146 DIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL---- 201
A+ AG AL LGF+H+ +H R++ E++RAVGSTG+ AGQ +D+
Sbjct: 139 PTALFAGTALLVLGFEHLAAHYRGDTAA-----RMVGEVSRAVGSTGLLAGQAVDMGIQN 193
Query: 202 ---EGEPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDI 258
E +EFV K + E S V G GA D +I++LR YGR G+LYQ+VDDI
Sbjct: 194 AGRAVELETLEFVHLHKTSALLEASLVIGAIAGGASDQDIEALRAYGRVTGLLYQIVDDI 253
Query: 259 LEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGD 311
+A T EE K G+ +Y GV+K+ E+ +L +AKE L F++
Sbjct: 254 ADATKTT---EELGKVAGQDAMTGKSTYSTILGVDKSREIVGQLLVEAKERLGVFEE--T 308
Query: 312 NVLPLY----SFIDYAADR 326
LPL F+++A DR
Sbjct: 309 KALPLIHLMDHFVNWAYDR 327
>gi|125558937|gb|EAZ04473.1| hypothetical protein OsI_26621 [Oryza sativa Indica Group]
Length = 366
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/308 (40%), Positives = 175/308 (56%), Gaps = 26/308 (8%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITV-KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
FD Y +++ L+ +I + P ++E+MRY++LA G KR P +C+AAC + G
Sbjct: 64 FDFNAYMGEKAAAVNRALDASIPADEPPAALHEAMRYALLAGG-KRVRPALCLAACAVVG 122
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
A P A A+EMVH SL+HDDLPCMDDD RRG+P+ H VYG IA+L GDAL L
Sbjct: 123 GREAWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLTGDALLSL 182
Query: 159 GFQHIV--SHTPPHLVPE---PRVLRVIAEIARAVGSTGMAAGQFLDLE--GEPNLV--- 208
F H+ PP + + RV+R I E+AR +GS G+ AGQ +DLE G V
Sbjct: 183 SFHHMARFDSYPPDIDADKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGSTETVPLE 242
Query: 209 --EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP 266
E++ K + E S V G L G D++I+SLR Y R++G+L+QVVDDIL+ T
Sbjct: 243 RLEYIHLHKTAALLEASVVIGAILGGGSDEQIESLRMYARSIGLLFQVVDDILDV---TK 299
Query: 267 RDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSF 319
EE K GK +Y G+EK+ E AE+L + A+E+L F + + PL
Sbjct: 300 SSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDAREQLSGFDQ--ETAAPLLHL 357
Query: 320 IDYAADRE 327
+Y A R+
Sbjct: 358 ANYIAYRQ 365
>gi|115473007|ref|NP_001060102.1| Os07g0580900 [Oryza sativa Japonica Group]
gi|33146837|dbj|BAC79826.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica
Group]
gi|50509220|dbj|BAD30490.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica
Group]
gi|113611638|dbj|BAF22016.1| Os07g0580900 [Oryza sativa Japonica Group]
gi|215767933|dbj|BAH00162.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768308|dbj|BAH00537.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/308 (40%), Positives = 175/308 (56%), Gaps = 26/308 (8%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITV-KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
FD Y +++ L+ +I + P ++E+MRY++LA G KR P +C+AAC + G
Sbjct: 64 FDFNAYMGEKAAAVNRALDASIPADEPPAALHEAMRYALLAGG-KRVRPALCLAACAVVG 122
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
A P A A+EMVH SL+HDDLPCMDDD RRG+P+ H VYG IA+L GDAL L
Sbjct: 123 GREAWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLTGDALLSL 182
Query: 159 GFQHIV--SHTPPHLVPE---PRVLRVIAEIARAVGSTGMAAGQFLDLE--GEPNLV--- 208
F H+ PP + + RV+R I E+AR +GS G+ AGQ +DLE G V
Sbjct: 183 SFHHMARFDSYPPDIDADKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGSTETVPLE 242
Query: 209 --EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP 266
E++ K + E S V G L G D++I+SLR Y R++G+L+QVVDDIL+ T
Sbjct: 243 RLEYIHLHKTAALLEASVVIGAILGGGSDEQIESLRMYARSIGLLFQVVDDILDV---TK 299
Query: 267 RDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSF 319
EE K GK +Y G+EK+ E AE+L + A+E+L F + + PL
Sbjct: 300 SSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDAREQLSGFDQ--ETAAPLLHL 357
Query: 320 IDYAADRE 327
+Y A R+
Sbjct: 358 ANYIAYRQ 365
>gi|302773810|ref|XP_002970322.1| hypothetical protein SELMODRAFT_231604 [Selaginella moellendorffii]
gi|300161838|gb|EFJ28452.1| hypothetical protein SELMODRAFT_231604 [Selaginella moellendorffii]
Length = 261
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/271 (38%), Positives = 152/271 (56%), Gaps = 26/271 (9%)
Query: 69 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMD 128
++E+MRY+V G +R P+ C+AACEL G + A P ACALEM+ A+ + DDLP +D
Sbjct: 1 MHEAMRYAV--GGGRRTCPIACIAACELVGGTQDDAMPGACALEMIKASFCVQDDLPSID 58
Query: 129 DDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAV 188
D R G+P+ H +G+ A+ AG AL LGF+H+ + R++AE++RA+
Sbjct: 59 DSELRHGKPTVHRAFGIPTALFAGTALLALGFEHLAARYSGDTAA-----RMVAEVSRAI 113
Query: 189 GSTGMAAGQFLDLEGEP-------NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSL 241
GSTG+ AGQ +DL E +EFV K + E S V G GA + EI++L
Sbjct: 114 GSTGLLAGQAVDLGIENPDRAVELETLEFVHLHKTSALLEASLVAGAIAGGASEQEIEAL 173
Query: 242 RRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEE 294
R YGR G+LYQ+VDD+ +A T EE K G+ +Y GV+K+ E+ E
Sbjct: 174 RAYGRVTGLLYQIVDDVADA---TKTMEELGKIPGQDAMAGKSTYSTILGVDKSREMVGE 230
Query: 295 LRAKAKEELDRFKKYGDNVLPLYSFIDYAAD 325
L +AKE L F++ LPL ++ A+
Sbjct: 231 LLVEAKERLGVFEE--TKALPLIHLANHFAN 259
>gi|78044434|ref|YP_360807.1| geranyltranstransferase [Carboxydothermus hydrogenoformans Z-2901]
gi|77996549|gb|ABB15448.1| geranyltranstransferase [Carboxydothermus hydrogenoformans Z-2901]
Length = 295
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/266 (39%), Positives = 155/266 (58%), Gaps = 13/266 (4%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
YP I+++M YS+ A G KR PV+ +AA E G+ P A +E +H SLIHDDL
Sbjct: 28 YPPVIHQAMNYSLKA-GGKRLRPVLMLAAGEWSGIAPEKLLPAAVGVECLHTYSLIHDDL 86
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MD+D RRG+P+NH V+G IAILAGDAL F+ + + T +P RV+RVI E+
Sbjct: 87 PAMDNDDFRRGKPTNHKVFGEAIAILAGDALLTKAFE-LTAKTLEQGIPAERVVRVIQEL 145
Query: 185 ARAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A A GS G+ AGQ +DL +P ++ ++ K + S + GG LAGA ++EI+
Sbjct: 146 AVASGSEGLIAGQVVDLSSSEAKKDPEVLLYIHLNKTARLIRYSLIAGGILAGATEEEIK 205
Query: 240 SLRRYGRAVGVLYQVVDDILEA-----KAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEE 294
+L YGR +G+ +Q+VDD+L+ K P ++K +K +YV+ +G+E+ + AEE
Sbjct: 206 ALDDYGRHLGLAFQIVDDLLDVVGDFQKIGKPVGSDEKNQK-LTYVSLFGIEETKKRAEE 264
Query: 295 LRAKAKEELDRFKKYGDNVLPLYSFI 320
AK L + + + L FI
Sbjct: 265 EINAAKNVLKPYGEKSSFFIKLAEFI 290
>gi|374296391|ref|YP_005046582.1| geranylgeranyl pyrophosphate synthase [Clostridium clariflavum DSM
19732]
gi|359825885|gb|AEV68658.1| geranylgeranyl pyrophosphate synthase [Clostridium clariflavum DSM
19732]
Length = 296
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/268 (35%), Positives = 151/268 (56%), Gaps = 18/268 (6%)
Query: 53 IDQNLEKAITVK--YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACA 110
++ LE+ I K + IY +MRYS+LA G KR PV+ +A C++ G + P ACA
Sbjct: 14 VNNFLEECIKEKDLMEKSIYNAMRYSLLA-GGKRLRPVLSLAVCDMLGGDLKEVLPYACA 72
Query: 111 LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPH 170
+EM+H SLIHDDLP MD+D RRG+ +NH V+G +AILAGD L + F+ ++ +T +
Sbjct: 73 VEMIHTYSLIHDDLPSMDNDDYRRGKLTNHKVFGEALAILAGDGLLNMAFELMLENTSSN 132
Query: 171 LVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAV 225
++ + IA++ G GM GQ +D+E E N V E++ K G + + S +
Sbjct: 133 CNNIENKVKAMGYIAKSSGVRGMIGGQVVDIESENNEVSVETLEYMHRLKTGALIKASVI 192
Query: 226 CGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPR-------DEEKKKKKGKS 278
+ A +++IQ+L Y +G+ +Q+ DDIL+ + + D KK +
Sbjct: 193 SAAIICNASNEDIQNLENYAEGIGLAFQIKDDILDVEGNIDKLGKNVGSDASNKK---TT 249
Query: 279 YVAFYGVEKAMEVAEELRAKAKEELDRF 306
YV+ YG+EK+ ++ E+ A + LD F
Sbjct: 250 YVSIYGLEKSKQMLTEITESAIKSLDSF 277
>gi|302769336|ref|XP_002968087.1| hypothetical protein SELMODRAFT_231100 [Selaginella moellendorffii]
gi|300163731|gb|EFJ30341.1| hypothetical protein SELMODRAFT_231100 [Selaginella moellendorffii]
Length = 261
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 104/271 (38%), Positives = 151/271 (55%), Gaps = 26/271 (9%)
Query: 69 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMD 128
++++MRY+V G +R P+ C+AACEL G + A P ACALEM+ A+ + DDLP +D
Sbjct: 1 MHDAMRYAV--GGGRRTCPIACIAACELVGGTQDDAMPGACALEMIKASFCVQDDLPSID 58
Query: 129 DDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAV 188
D R G+P+ H +G+ A+ AG AL LGF+H+ + R++AE+ RA+
Sbjct: 59 DSELRHGKPTVHRAFGIPTALFAGTALLALGFEHLAARYSGDTAA-----RMVAEVGRAI 113
Query: 189 GSTGMAAGQFLDLEGEP-------NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSL 241
GSTG+ AGQ +DL E +EFV K + E S V G GA + EI++L
Sbjct: 114 GSTGLLAGQAVDLGIENPDRGVELETLEFVHLHKTSALLEASLVAGAIAGGASEQEIEAL 173
Query: 242 RRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEE 294
R YGR G+LYQ+VDD+ +A T EE K G+ +Y GV+K+ E+ +
Sbjct: 174 RAYGRVTGLLYQIVDDVADA---TKTMEELGKIPGQDAMAGKSTYSTILGVDKSREMVGQ 230
Query: 295 LRAKAKEELDRFKKYGDNVLPLYSFIDYAAD 325
L +AKE L F++ LPL D+ A+
Sbjct: 231 LLVEAKERLGVFEET--KALPLIHLADHFAN 259
>gi|188586314|ref|YP_001917859.1| farnesyl-diphosphate synthase [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179351001|gb|ACB85271.1| farnesyl-diphosphate synthase [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 297
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 159/291 (54%), Gaps = 24/291 (8%)
Query: 53 IDQNLEKAITVK--YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACA 110
+DQ L++ + K YP I+E+M YSV A G KR P++ +AA +LFG N+ P ACA
Sbjct: 14 VDQKLQEYLPNKSEYPTAIHEAMHYSVFA-GGKRLRPLLTLAAGDLFGANKKTILPFACA 72
Query: 111 LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPH 170
+E++H SLIHDDLP +D+D RRG+ +NH V+G DIAILAGDAL F+ + S +
Sbjct: 73 IELIHTYSLIHDDLPALDNDDLRRGKSTNHVVFGEDIAILAGDALLNYAFELMTSKGVEN 132
Query: 171 LVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN------LVEFVQEKKFGEMSECSA 224
L I+E+A+A G+ GM GQ +D++ E N V ++ + K G + S
Sbjct: 133 FTDARTPLWAISEVAKASGTKGMIGGQVVDIKSEKNADIDLETVSYIHKHKTGALFTASI 192
Query: 225 VCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKK-GK------ 277
G L+ A +++ L Y + +G+ +QVVDDIL+ + DE+K K GK
Sbjct: 193 RIGAILSQASQADLEKLTTYAQKLGLAFQVVDDILDIEG----DEQKLGKTVGKDDDNEK 248
Query: 278 -SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+Y G++++ E A L +A L YG+ L + +RE
Sbjct: 249 ATYPKIMGLKESHEYASRLHHEA---LTAISDYGEEANILRELANKIVNRE 296
>gi|357012959|ref|ZP_09077958.1| polyprenyl synthetase [Paenibacillus elgii B69]
Length = 301
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/274 (36%), Positives = 161/274 (58%), Gaps = 14/274 (5%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKY--PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
++ Y + + I++ L+++I + P + ESM YS++A G KR P++ +AA E G
Sbjct: 7 IREYIRDMASLIERELQQSIPSSWAIPAPLRESMMYSLMA-GGKRLRPILVLAAAEALGG 65
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+ AA P A A+E++H SLIHDDLP MD+D RRG+P+NH VYG +AILAGDAL
Sbjct: 66 SPEAAVPAALAVEIIHTYSLIHDDLPAMDNDDFRRGKPTNHKVYGEAMAILAGDALLTHA 125
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEK 214
F +V H +P RV+ ++ E++R G+ GM GQ D+ GE + +E++
Sbjct: 126 FYSVVQSARKHNIPADRVVDIVEELSRLSGAPGMVGGQAADMLGEQGVTKLEELEYIHLH 185
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL-----EAKAQTPRDE 269
K ++ S GG +AGA + ++ +L R+G +G+ +Q+ DD+L E+K P
Sbjct: 186 KTSDLIVFSLKAGGRIAGATEAQLAALERFGTCIGLAFQIQDDVLDLIGDESKLGKPVQS 245
Query: 270 EKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEEL 303
+ K++K +Y F G+E ++ A EL +AK+ +
Sbjct: 246 DVKQQK-VTYPYFIGIEASISKAGELTREAKQAI 278
>gi|134298940|ref|YP_001112436.1| polyprenyl synthetase [Desulfotomaculum reducens MI-1]
gi|134051640|gb|ABO49611.1| farnesyl-diphosphate synthase [Desulfotomaculum reducens MI-1]
Length = 294
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/287 (36%), Positives = 159/287 (55%), Gaps = 19/287 (6%)
Query: 46 WTTLITEIDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIA 103
W+ ++D+ L++ I + YP I+E+MRYS+ A G KR P++ +AA + G N
Sbjct: 10 WSQ---KVDEALDRYIPSSDAYPSVIHEAMRYSIFAGG-KRLRPILVLAATQAVGGNTEK 65
Query: 104 AFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHI 163
P ACA+E++H SL+HDDLP MD+D RRG+P+NH VYG +AIL GDAL L F+ I
Sbjct: 66 VMPVACAMELIHTYSLVHDDLPAMDNDDFRRGRPTNHKVYGEAMAILVGDALQTLAFELI 125
Query: 164 VSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGE 218
T RV +V EIA+A GS+G+ GQ +D+ E + +E++ K G
Sbjct: 126 AQTTES--FEADRVNQVTLEIAKAAGSSGLIGGQVVDILSENRDIDGDTLEYIHRHKTGA 183
Query: 219 MSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL-----EAKAQTPRDEEKKK 273
+ S G L GA +++ +L Y +G+ +Q+ DD+L EAK P + K
Sbjct: 184 LFRASIRAGAILGGATVNQLAALTLYAEQMGLAFQIKDDLLDIEGDEAKIGKPVGSDIKN 243
Query: 274 KKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+K +Y + YG+E+A +A E A+A + F + + + FI
Sbjct: 244 QK-STYPSIYGIEEAKRMATEAAAEAVNAIKIFNHKAEFLQDIMHFI 289
>gi|39996864|ref|NP_952815.1| trans-isoprenyl diphosphate synthase [Geobacter sulfurreducens PCA]
gi|409912286|ref|YP_006890751.1| trans-isoprenyl diphosphate synthase [Geobacter sulfurreducens
KN400]
gi|39983752|gb|AAR35142.1| trans-isoprenyl diphosphate synthase [Geobacter sulfurreducens PCA]
gi|298505877|gb|ADI84600.1| trans-isoprenyl diphosphate synthase [Geobacter sulfurreducens
KN400]
Length = 297
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 166/300 (55%), Gaps = 16/300 (5%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVK--YPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
DLK Y +D+ LE+ + + P ++ +MRYSV A G KR P++ +AAC+
Sbjct: 1 MDLKGYLKERCALVDEALERHLPAEDELPSSVHRAMRYSVFAGG-KRVRPILMLAACDAV 59
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G + A P ACA+EM+H SLIHDDLP MDDD RRG+P+NH V+G IAILAGDAL
Sbjct: 60 GGDTALALPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDALLT 119
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN------LVEFV 211
F I S + V R+L VI EIA GS GM GQ +D+E E N V+++
Sbjct: 120 EAFILISSPSYAAAVGSDRLLPVIHEIALCAGSRGMVGGQVVDMESEGNKEIDLATVQYI 179
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA---QTPRD 268
+K G + + S G L GA+ D ++++ RYG A+G+ +Q+ DDIL+ + Q +D
Sbjct: 180 HTRKTGALIKASIKAGAVLGGANADAVKAVTRYGEAIGLAFQIADDILDIEGTTEQIGKD 239
Query: 269 EEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+ +GK +Y A G+ ++ A+EL A E L F D PL Y R+
Sbjct: 240 AGSDEARGKATYPAVLGLAESKRRAQELLDLAIEALSPFDHRAD---PLREIARYIVSRK 296
>gi|319788992|ref|YP_004150625.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1]
gi|317113494|gb|ADU95984.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1]
Length = 294
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 165/305 (54%), Gaps = 27/305 (8%)
Query: 40 FDLKTYWTTLITEIDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
DLK Y ID L + ++ +++YE+++YS L G KR P++C+A CE+
Sbjct: 1 MDLKAYLKERKALIDSVLLTYLPPEPEFGKKLYEAVKYS-LTVGGKRLRPILCLAGCEIV 59
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G NR A ACA+EM+H SLIHDDLP MD+D RRG P+ +G AILAGDAL
Sbjct: 60 GGNRNDALTPACAIEMIHTYSLIHDDLPAMDNDTLRRGHPTTWVKFGEATAILAGDALLN 119
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN----LVE--FV 211
F+ + R ++VI+EIARA G GM GQ DL+ E L E F+
Sbjct: 120 RAFEVLADWE----FDCNRKVKVISEIARASGMLGMVLGQQCDLDAEGRGDVPLEELLFI 175
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
+ K G + S V GG G +EI +LRRYG ++G+ +Q++DD+L+ D+EK
Sbjct: 176 HKHKTGRLITASVVSGGITGGGSPEEIDALRRYGDSLGLAFQIIDDVLDVVG----DQEK 231
Query: 272 KKK-------KGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYA 323
K KGK ++V +GVEKA ++A E +A E L F + PL + +
Sbjct: 232 LGKNVGSDLEKGKTTFVTIFGVEKARKMAYEEVERAVEALSIFP--AEKREPLEAIARFV 289
Query: 324 ADREF 328
+RE+
Sbjct: 290 VEREY 294
>gi|169333801|ref|ZP_02860994.1| hypothetical protein ANASTE_00187 [Anaerofustis stercorihominis DSM
17244]
gi|169259366|gb|EDS73332.1| polyprenyl synthetase [Anaerofustis stercorihominis DSM 17244]
Length = 294
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 150/271 (55%), Gaps = 19/271 (7%)
Query: 55 QNLEKAITVK--YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALE 112
+++ K T+K P+ I+ES YS+ G KR P++ + +C+ G + A P A+E
Sbjct: 15 EDVLKKYTIKEGKPKSIFESFNYSLFV-GGKRIRPILLMESCKCVGGDTNEALPLMAAME 73
Query: 113 MVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLV 172
M+H SLIHDDLPCMDDD RRG+P+NHTVYG A+LAGD+L L ++ ++
Sbjct: 74 MIHTYSLIHDDLPCMDDDELRRGKPTNHTVYGEATALLAGDSLLNLAYETMLKGAKSS-K 132
Query: 173 PEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN-----LVEFVQEKKFGEMSECSAVCG 227
R + + IA + G GM AGQ +D+E E ++F+ + K G + S + G
Sbjct: 133 DINRYVEAMNVIADSAGVKGMIAGQVMDMESEGKEPDGETLDFIHDNKTGAILRASVISG 192
Query: 228 GFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA-------QTPRDEEKKKKKGKSYV 280
+ GA DDE+++L Y RA+G+++QVVDDIL+ + + D E+ K +Y
Sbjct: 193 AVVGGATDDELKNLSEYARAIGLMFQVVDDILDVVSDEETLGKKVGMDSERNK---MTYP 249
Query: 281 AFYGVEKAMEVAEELRAKAKEELDRFKKYGD 311
YG+E++ E +EL + L F D
Sbjct: 250 YVYGLERSYEKVDELLNISLNSLSDFGSEAD 280
>gi|323702778|ref|ZP_08114438.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574]
gi|333924276|ref|YP_004497856.1| polyprenyl synthetase [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323532295|gb|EGB22174.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574]
gi|333749837|gb|AEF94944.1| Polyprenyl synthetase [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 294
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/261 (39%), Positives = 149/261 (57%), Gaps = 16/261 (6%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
S Q LK+Y + +++ L A YP I+E+MRYSV A G KR P++ +AA E
Sbjct: 2 SYQDQLKSYALAVDKALNEYLPAAEV--YPSTIHEAMRYSVFAGG-KRLRPILTIAAAEA 58
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
G + P ACALE++H SL+HDDLP MD+D RRG+P+NH VYG +AIL GDAL
Sbjct: 59 VGGSMEQVMPVACALELIHTYSLVHDDLPAMDNDDFRRGRPTNHKVYGEAMAILVGDALL 118
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFV 211
F+ +++ T + P+ +V +V EIARA GS G+ GQ +D E ++ E++
Sbjct: 119 TQAFE-VIAGTAVKVSPD-KVNQVTLEIARAAGSLGLIGGQVVDTLSEDQVIDGQVLEYI 176
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL-----EAKAQTP 266
K G + + G L+GA +E+ +L Y +G+ +Q+ DD+L EAK P
Sbjct: 177 HRHKTGALFRVAVRAGAILSGASAEELAALTTYAEQMGLAFQIKDDLLDIEGDEAKIGKP 236
Query: 267 RDEEKKKKKGKSYVAFYGVEK 287
+ K KK +Y A YG+EK
Sbjct: 237 VGSDVKNKKA-TYPALYGLEK 256
>gi|302389865|ref|YP_003825686.1| farnesyl-diphosphate synthase [Thermosediminibacter oceani DSM
16646]
gi|302200493|gb|ADL08063.1| farnesyl-diphosphate synthase [Thermosediminibacter oceani DSM
16646]
Length = 296
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 100/275 (36%), Positives = 155/275 (56%), Gaps = 16/275 (5%)
Query: 64 KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDD 123
+YP++I+E+MRYS G KR PV+ + A ELFG+ PTAC +EM+H SLIHDD
Sbjct: 28 EYPQKIHEAMRYSTF-NGGKRIRPVLTMKAAELFGLQGEKVIPTACGIEMIHTYSLIHDD 86
Query: 124 LPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAE 183
LP MD+D RRG+P+ H V+G IA+LAGDAL L F IV + + V+ VI
Sbjct: 87 LPIMDNDDFRRGKPTCHKVFGDAIALLAGDALLTLAFNTIVKNAQIEGISMQAVIDVIGR 146
Query: 184 IARAVGSTGMAAGQFLDLEGEPNLVE-----FVQEKKFGEMSECSAVCGGFLAGADDDEI 238
I+RA GS GM GQ +D+ + ++ ++ K G + + S G LA A ++
Sbjct: 147 ISRASGSLGMIGGQTVDILSQGVSIDEKTLFYMDYHKTGCLIQASLWAGARLAEAPASDL 206
Query: 239 QSLRRYGRAVGVLYQVVDDIL-----EAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAE 293
L +G +G+++Q+VDD+L E K P + + KK ++ + YG E ++++ +
Sbjct: 207 NKLDIFGEKIGLIFQIVDDLLDICGDEKKLGKPVGSDVRNKK-STFPSVYGYENSVKLIK 265
Query: 294 ELRAKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
+L +AKE + FK N +D+ +R++
Sbjct: 266 DLSEEAKEIILEFK----NGEFFVQLVDFLVERQY 296
>gi|420156901|ref|ZP_14663741.1| polyprenyl synthetase [Clostridium sp. MSTE9]
gi|394756911|gb|EJF39970.1| polyprenyl synthetase [Clostridium sp. MSTE9]
Length = 295
Score = 173 bits (439), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 107/294 (36%), Positives = 159/294 (54%), Gaps = 34/294 (11%)
Query: 57 LEKAITVKYP------EQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACA 110
LE+A++ P ++++ SM YS+L+ G KR P++ + C L G + AA P ACA
Sbjct: 13 LEEALSRYLPGGDQLQQELFSSMEYSLLSGG-KRIRPILTLEFCRLCGGSLTAALPFACA 71
Query: 111 LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPH 170
+EM+H SLIHDDLPCMDDD RRG+P+NH VYG A+LAGDAL L F+ ++S
Sbjct: 72 IEMIHTYSLIHDDLPCMDDDELRRGRPTNHRVYGEATALLAGDALLTLAFETMLSPQTIR 131
Query: 171 LVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAV 225
+ +ARA G+TGM GQ +DL E + + + E+K G + +A
Sbjct: 132 TAGAVKTATAAGVLARAAGATGMVGGQIIDLASEGKKIPLSTLRVMDERKTGALILAAAE 191
Query: 226 CGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPR-------DEEKKKKKGKS 278
G + GA +++I++ R Y +A+G+ +Q+VDDIL+ + D+ K +
Sbjct: 192 MGCVVGGAGNEKIRAAREYAKALGLAFQIVDDILDVTGDSTLLGKNVGVDDLNDK---ST 248
Query: 279 YVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAAD--REFSV 330
YV+ G++ A + EL +A L +F GD Y AD RE SV
Sbjct: 249 YVSLMGLDGAKKAVRELTDEAVTALAKFD--GDTA--------YLADLARELSV 292
>gi|334137118|ref|ZP_08510563.1| geranyltranstransferase [Paenibacillus sp. HGF7]
gi|333605316|gb|EGL16685.1| geranyltranstransferase [Paenibacillus sp. HGF7]
Length = 300
Score = 173 bits (439), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 97/265 (36%), Positives = 155/265 (58%), Gaps = 17/265 (6%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVKY--PEQIYESMRYSVLAKGTKRAPPVMCVAAC 94
+T +++ Y + E++ L + + P+ + +S +YS+ A G KR P++ +AA
Sbjct: 2 NTDMNIQEYIASYAKEVEGELRELFPRLWDIPDVLRQSAQYSIDA-GGKRLRPILVLAAA 60
Query: 95 ELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDA 154
E G + AA P ACA+EMVH SLIHDDLP MD+D RRG+ +NH VYG +AILAGDA
Sbjct: 61 EALGGRKEAAMPVACAIEMVHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEAMAILAGDA 120
Query: 155 LFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL-----VE 209
L F + S H VP +VL ++ E+A G+ GM GQ D++GE + +E
Sbjct: 121 LLTQAF-YSASQARRHGVPAEQVLNIVEELAEYSGARGMVGGQVADMKGEQGITELSGLE 179
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPR-- 267
++ + K ++ S GG +AGADD ++++L +GR++G+ +Q+ DDIL+ +
Sbjct: 180 YIHQHKTSDLIIFSLRAGGRIAGADDKQLEALTAFGRSIGLAFQIQDDILDVTGTQEKLG 239
Query: 268 ----DEEKKKKKGKSYVAFYGVEKA 288
+EK++K +Y F G+E++
Sbjct: 240 KAVGSDEKQQK--VTYPFFIGMEES 262
>gi|403744977|ref|ZP_10954005.1| Polyprenyl synthetase [Alicyclobacillus hesperidum URH17-3-68]
gi|403121632|gb|EJY55909.1| Polyprenyl synthetase [Alicyclobacillus hesperidum URH17-3-68]
Length = 291
Score = 173 bits (439), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 106/289 (36%), Positives = 156/289 (53%), Gaps = 13/289 (4%)
Query: 42 LKTYWTTLITEIDQNLEKAI-TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVN 100
+ +Y TE+ L+ + T ++YE+M YS++A G KR P + +A + FGV
Sbjct: 1 MGSYLEFCKTELQAYLQGLLHTDGLATRLYEAMNYSLMADG-KRLRPALLMATAQTFGVE 59
Query: 101 RIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGF 160
R P A ALEM+H SLIHDDLPCMDDD RRGQP+NH V+G IA+LAGD L F
Sbjct: 60 RQRVLPAAAALEMIHCYSLIHDDLPCMDDDSLRRGQPTNHVVFGEAIALLAGDGLLTEAF 119
Query: 161 QHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLE---GEPNL--VEFVQEKK 215
+ P VP R LR+I +A G+ GM GQ +D+E G+ L V+F+ K
Sbjct: 120 ALLARPIPE--VPAERQLRMIQILASRAGADGMVGGQAVDVERTGGQGTLTDVQFIHLHK 177
Query: 216 FGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP---RDEEKK 272
+ + + G D+ ++L YG A+G+ +Q+VDD+L+ T + K
Sbjct: 178 TARLIQAAVEIGSLFPDLDEKAQEALSTYGEALGLAFQMVDDVLDVVGSTSELGKTAGKD 237
Query: 273 KKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+ +GK +Y F G+E+ +AEE A+ +E L R + + L S +
Sbjct: 238 EAEGKLTYPRFIGIEETRRLAEETIARGQEALHRCGIHSPYLAELQSLV 286
>gi|406871183|gb|EKD22087.1| hypothetical protein ACD_87C00167G0001 [uncultured bacterium]
Length = 302
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/306 (36%), Positives = 154/306 (50%), Gaps = 21/306 (6%)
Query: 36 RSTQFDLKTYWTTLITEIDQNLEKAITVKY--PEQIYESMRYSVLAKGTKRAPPVMCVAA 93
R+ + LK Y ID L+ + + P I++++RYS+LA G KR P++C+AA
Sbjct: 3 RNDELQLKEYLAGRKALIDATLDGLLPDEELCPPVIFQAVRYSLLAGG-KRLRPILCLAA 61
Query: 94 CELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGD 153
E G + P ACALE +H SLIHDDLP MD+D RRG+ + H V+G DIAILAGD
Sbjct: 62 AEAVGGDSKTILPVACALEYIHTYSLIHDDLPAMDNDDYRRGRLTAHKVFGEDIAILAGD 121
Query: 154 ALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF--- 210
AL F + +P +L V AEIA A G GM GQ LD+ E V+
Sbjct: 122 ALLTEAFHLLTRKELMPGIPPEYILTVTAEIAAAAGWFGMVGGQVLDVRSEGKKVDLETL 181
Query: 211 --VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA----- 263
+ K GE+ S G L+GA + SL YGR +G+ +Q+ DDIL +
Sbjct: 182 QQIHRLKTGELIRVSLRSGAILSGASTEMTASLSDYGRQIGLAFQIADDILNVEGDRVLL 241
Query: 264 --QTPRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFID 321
QT D ++K ++ + G+E + AE L KE L + D PL
Sbjct: 242 GKQTGSDAARRK---VTFPSLLGIEASRAHAESL---IKEALKSLASFDDRAAPLRLITG 295
Query: 322 YAADRE 327
Y +R+
Sbjct: 296 YILERK 301
>gi|312127936|ref|YP_003992810.1| polyprenyl synthetase [Caldicellulosiruptor hydrothermalis 108]
gi|311777955|gb|ADQ07441.1| Polyprenyl synthetase [Caldicellulosiruptor hydrothermalis 108]
Length = 299
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/301 (35%), Positives = 167/301 (55%), Gaps = 21/301 (6%)
Query: 41 DLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVN 100
+L+ Y +++++LEK + + PE IY++MRYSV A G KR P++C+ + ++ +
Sbjct: 5 ELEEYINLSQKKVEEHLEKILKERSPEIIYQAMRYSVFA-GGKRLRPLLCLLSYQMVSKD 63
Query: 101 RIA---AFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
+I A A+E++H SLIHDDLP MD+D RRG+P+NH V+G IAILAGDAL
Sbjct: 64 QIVDEKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAGDALLN 123
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFL-------DLEGEPNLVEF 210
L + + + E +++ + A G GM GQ + D++ E L E
Sbjct: 124 LAAEVCMDWILRYGCRE-NLIKAAKYLFWASGVEGMIGGQVIDITNSGQDIKSEELLFE- 181
Query: 211 VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEE 270
+ KK + + S VCG +AGA+DD + L YG+ +G+ +Q+ DD+L+ + + +
Sbjct: 182 MHLKKTSRLIQASCVCGALVAGAEDDVVSDLEEYGKNLGLAFQIRDDVLDVIGDSKKVGK 241
Query: 271 K----KKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
K+K ++V FYG+EKA ++ E KA +D KKY DN L +Y +R
Sbjct: 242 SIGKDIKEKKNTFVTFYGLEKAQQLVEHYSQKA---IDVIKKY-DNSELLIELTNYLINR 297
Query: 327 E 327
E
Sbjct: 298 E 298
>gi|225174881|ref|ZP_03728878.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
gi|225169521|gb|EEG78318.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
Length = 293
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/281 (37%), Positives = 168/281 (59%), Gaps = 19/281 (6%)
Query: 50 ITEIDQNLEKAITVK--YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPT 107
I ++D+ LE+ I + +P++I+ ++RYSV A G KR P++ +AA E+FGV R+ A P
Sbjct: 9 IKDVDEALERLIPAEDTFPQEIHRAVRYSVFAGG-KRLRPLLTLAAAEIFGVPRLHALPA 67
Query: 108 ACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHT 167
ACA+EMVH SLIHDDLP +DDD RRG+ SNH V+G +AILAGD+L L F+ + +
Sbjct: 68 ACAIEMVHTYSLIHDDLPALDDDDYRRGRLSNHKVFGDAMAILAGDSLLTLAFETLAAEA 127
Query: 168 PPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSEC 222
+ P V+R+ + +A G +GM GQ +DL E V +++ K G + C
Sbjct: 128 TAYFAP-ATVVRLTEALGKAAGMSGMIGGQVVDLLSEGKQVNAATLDYIHRHKTGALFTC 186
Query: 223 SAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA-------QTPRDEEKKKKK 275
G + GA +E+Q L + + +G+ +Q+VDDIL+ +T D+ ++K
Sbjct: 187 CIKSGAIMGGASLEEMQRLTVFAQNIGLAFQIVDDILDITGDEAALGKKTGADQNRQK-- 244
Query: 276 GKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPL 316
+Y A YG+++A E A +L + A++E++ F G ++L L
Sbjct: 245 -ATYPALYGLKQAEEKARDLLSAAEKEMEYFGDAGKSLLFL 284
>gi|354582557|ref|ZP_09001458.1| Polyprenyl synthetase [Paenibacillus lactis 154]
gi|353198849|gb|EHB64315.1| Polyprenyl synthetase [Paenibacillus lactis 154]
Length = 301
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 149/247 (60%), Gaps = 12/247 (4%)
Query: 64 KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDD 123
K PE ++ SM YS++A G KR P++ +AACE G +R AA P ACA+EMVH SLIHDD
Sbjct: 31 KVPETLHRSMTYSLMAGG-KRLRPLLVIAACEAAGGSREAALPVACAVEMVHTYSLIHDD 89
Query: 124 LPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAE 183
LP MDDD RRG+P+NH V+G AILAGDAL F IV + H +P RVL ++ +
Sbjct: 90 LPAMDDDDFRRGKPTNHKVFGEAAAILAGDALLTHAFYSIVQSSRKHGIPADRVLSIVED 149
Query: 184 IARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCGGFLAGADDDEI 238
+A G GM GQ D+EGE L +E++ K ++ S + GG +AG + +I
Sbjct: 150 LAEYAGPRGMVGGQVADMEGEQGLTSLEQLEYIHLHKTSDLIMFSLMAGGRVAGCSEAQI 209
Query: 239 QSLRRYGRAVGVLYQVVDDIL-----EAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAE 293
SLR +G+ +G+ +Q+ DDIL EAK P + K++K +Y F G+E + E
Sbjct: 210 DSLRSFGKHIGLAFQIQDDILDLIGDEAKLGKPTQSDVKQEK-VTYPFFIGLEASKREVE 268
Query: 294 ELRAKAK 300
L A+AK
Sbjct: 269 RLTAEAK 275
>gi|114331488|ref|YP_747710.1| polyprenyl synthetase [Nitrosomonas eutropha C91]
gi|114308502|gb|ABI59745.1| farnesyl-diphosphate synthase [Nitrosomonas eutropha C91]
Length = 297
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/307 (35%), Positives = 168/307 (54%), Gaps = 32/307 (10%)
Query: 41 DLKTYWTTLITEIDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
D + + T + I+ LE+ + T P +++E+MRY+VL G KR P++ AA EL G
Sbjct: 4 DFQLWTTERLALIESFLEQNLPATNCAPARLHEAMRYAVL-NGGKRVRPLLSFAAGELSG 62
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
++ + A+E++HA SL+HDDLPCMD+D RRG+P+ H YG A+L GD+L L
Sbjct: 63 ADKTQVIAASAAVELIHAYSLVHDDLPCMDNDILRRGKPTCHIRYGEPTALLVGDSLQSL 122
Query: 159 GFQHIVSHTPPHLVPEPRV-LRVIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQ 212
FQ + L +PR L +I +A A GS GMA GQ +DL+ +EF+
Sbjct: 123 AFQLLAESA---LTEDPRTQLEMIRHLAFAAGSRGMAGGQAIDLDSVGKTLSLPELEFMH 179
Query: 213 EKKFGEMSECSAV----CGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP-- 266
K G + + + CG L ++D+ + L + + +G+ +QVVDDIL+A+A T
Sbjct: 180 IHKTGALIRAAVILGARCGSRL---NEDQFKQLDHFAKCIGLAFQVVDDILDAEASTAAL 236
Query: 267 -----RDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFID 321
+D E K +YV+ G+++A E+A EL+ +A LD+F G L L D
Sbjct: 237 GKTAGKDAENNK---PTYVSILGIKQARELAHELQREASGVLDKF---GPEALRLQQITD 290
Query: 322 YAADREF 328
+ REF
Sbjct: 291 FIVQREF 297
>gi|438002488|ref|YP_007272231.1| Octaprenyl-diphosphate synthase [Tepidanaerobacter acetatoxydans
Re1]
gi|432179282|emb|CCP26255.1| Octaprenyl-diphosphate synthase [Tepidanaerobacter acetatoxydans
Re1]
Length = 286
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 158/280 (56%), Gaps = 15/280 (5%)
Query: 53 IDQNLEKAITVK--YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACA 110
++Q L + + K +P +++E+M YS L+ G KR P++ + A ELFG++ PTAC
Sbjct: 5 VEQELSRYLPRKDEFPSKLHEAMHYSTLSGG-KRLRPIIVMKAAELFGISYEKVIPTACG 63
Query: 111 LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPH 170
+EM+H SLIHDDLP MD+D RRG+P+ H +YG +A+LAGDAL F I ++
Sbjct: 64 IEMIHTYSLIHDDLPVMDNDDFRRGKPTCHKIYGDAVALLAGDALLTHAFATIAKNSKIS 123
Query: 171 LVPEPRVLRVIAEIARAVGSTGMAAGQFLDL-----EGEPNLVEFVQEKKFGEMSECSAV 225
+ V+ VI +++ A G GM GQ +D+ + + + ++ K G + S
Sbjct: 124 GINPDAVVDVIEKVSLAAGGYGMIGGQTVDIITSGKDVSRDTLFYISTHKTGCLMSVSFW 183
Query: 226 CGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQ-----TPRDEEKKKKKGKSYV 280
G LAGA +++++++ +G +G+++Q+VDDIL+ K P + K KK ++V
Sbjct: 184 SGARLAGASKEDLETIKCFGEKLGLIFQIVDDILDIKGSEAVLGKPVGSDMKNKK-NTFV 242
Query: 281 AFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+G K++E+ L +AK+ + + D + L FI
Sbjct: 243 NLFGFNKSVEIVNNLSLEAKQLISNYNN-NDFFIQLTDFI 281
>gi|423090783|ref|ZP_17079069.1| putative geranyltranstransferase [Clostridium difficile
70-100-2010]
gi|357555898|gb|EHJ37520.1| putative geranyltranstransferase [Clostridium difficile
70-100-2010]
Length = 295
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/276 (35%), Positives = 156/276 (56%), Gaps = 20/276 (7%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
Y + + E+M YS L+ G KR P++ + AC++ G N A P A A+EM+H SLIHDDL
Sbjct: 28 YQKTVIEAMNYS-LSAGGKRLRPILTLEACKIVGGNEDEAIPFAIAIEMIHTYSLIHDDL 86
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P +D+D RRG+P+NH VYG + ILAGDAL F+ +++ + PE + L+ I EI
Sbjct: 87 PALDNDDLRRGRPTNHKVYGEAMGILAGDALLNYAFEVMLAGSINKENPE-KYLKAINEI 145
Query: 185 ARAVGSTGMAAGQFLDLEGEPNLVE-----FVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A+ G GM GQ +D+E E +E ++ K M + G + GA+ ++++
Sbjct: 146 AKGAGIYGMIGGQVVDVESENKQIEKEKLDYIHMNKTAAMMVGCMIAGATIGGANSEQME 205
Query: 240 SLRRYGRAVGVLYQVVDDIL-----EAK--AQTPRDEEKKKKKGKSYVAFYGVEKAMEVA 292
+ +Y + +G+ +Q+VDDIL EAK + D E K +Y + G++K+ E+A
Sbjct: 206 EITKYAKNIGLSFQIVDDILDIVGDEAKLGKKVGSDIENHK---STYPSLLGLDKSKEIA 262
Query: 293 EELRAKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
L +AK+ +++ D+V L +Y DRE+
Sbjct: 263 HNLIDEAKKSIEKLS---DDVDFLKGLAEYIIDREY 295
>gi|148264230|ref|YP_001230936.1| polyprenyl synthetase [Geobacter uraniireducens Rf4]
gi|146397730|gb|ABQ26363.1| farnesyl-diphosphate synthase [Geobacter uraniireducens Rf4]
Length = 297
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/293 (39%), Positives = 163/293 (55%), Gaps = 13/293 (4%)
Query: 40 FDLKTYWTTLITEIDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
DLK Y T +D+ L++ + + P +++SMRYSV A G KR P++ +AAC+
Sbjct: 1 MDLKAYLKERCTLVDEALDRFLPKADELPFSLHKSMRYSVFAGG-KRIRPILMLAACDAV 59
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G + A P ACA+EM+H SLIHDDLP MDDD RRG P+NH V+G IAILAGDAL
Sbjct: 60 GGDISLAMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKVFGEAIAILAGDALLT 119
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN------LVEFV 211
F + P +P VLRVI EI+ GS GM GQ +D+E E V+++
Sbjct: 120 EAFILMSRVEPSASLPPEAVLRVIQEISHCAGSHGMVGGQVVDMESEGKAEMDLATVQYI 179
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP---RD 268
K G + + S G L GAD+ + SL YG A+G+ +Q+ DDIL+ + T +D
Sbjct: 180 HTHKTGALIKASVKAGAILGGADEARLASLTTYGEAIGLAFQIADDILDIEGTTEEIGKD 239
Query: 269 EEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+ +GK +Y A G+ ++ + A EL A E L F D + + ++I
Sbjct: 240 AGSDEARGKATYPAVMGLAESKKRAVELVDMALESLAGFDHRADPLRDIATYI 292
>gi|332799347|ref|YP_004460846.1| polyprenyl synthetase [Tepidanaerobacter acetatoxydans Re1]
gi|332697082|gb|AEE91539.1| Polyprenyl synthetase [Tepidanaerobacter acetatoxydans Re1]
Length = 296
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 158/280 (56%), Gaps = 15/280 (5%)
Query: 53 IDQNLEKAITVK--YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACA 110
++Q L + + K +P +++E+M YS L+ G KR P++ + A ELFG++ PTAC
Sbjct: 15 VEQELSRYLPRKDEFPSKLHEAMHYSTLS-GGKRLRPIIVMKAAELFGISYEKVIPTACG 73
Query: 111 LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPH 170
+EM+H SLIHDDLP MD+D RRG+P+ H +YG +A+LAGDAL F I ++
Sbjct: 74 IEMIHTYSLIHDDLPVMDNDDFRRGKPTCHKIYGDAVALLAGDALLTHAFATIAKNSKIS 133
Query: 171 LVPEPRVLRVIAEIARAVGSTGMAAGQFLDL-----EGEPNLVEFVQEKKFGEMSECSAV 225
+ V+ VI +++ A G GM GQ +D+ + + + ++ K G + S
Sbjct: 134 GINPDAVVDVIEKVSLAAGGYGMIGGQTVDIITSGKDVSRDTLFYISTHKTGCLMSVSFW 193
Query: 226 CGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQ-----TPRDEEKKKKKGKSYV 280
G LAGA +++++++ +G +G+++Q+VDDIL+ K P + K KK ++V
Sbjct: 194 SGARLAGASKEDLETIKCFGEKLGLIFQIVDDILDIKGSEAVLGKPVGSDMKNKK-NTFV 252
Query: 281 AFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+G K++E+ L +AK+ + + D + L FI
Sbjct: 253 NLFGFNKSVEIVNNLSLEAKQLISNYNN-NDFFIQLTDFI 291
>gi|83590356|ref|YP_430365.1| farnesyl-diphosphate synthase [Moorella thermoacetica ATCC 39073]
gi|83573270|gb|ABC19822.1| farnesyl-diphosphate synthase [Moorella thermoacetica ATCC 39073]
Length = 297
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 100/244 (40%), Positives = 145/244 (59%), Gaps = 12/244 (4%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
YP ++++M YS+ A G KR P++ +AA E G P ACA+E +H SLIHDDL
Sbjct: 31 YPPAVHQAMHYSLFAGG-KRLRPILVLAAGEAVGSQPEPLLPAACAVEFIHTYSLIHDDL 89
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MD+D RRG+P+ H VYG IA+LAGDAL L F+ ++S P + PE R+LR E+
Sbjct: 90 PAMDNDDYRRGRPTCHKVYGEAIALLAGDALLTLAFE-VLSRIPATIPPE-RILRATREL 147
Query: 185 ARAVGSTGMAAGQFLDL--EGEPNLVE---FVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A + GS G+ GQ +D+ EG+P +E ++ K G + GG L GA ++++
Sbjct: 148 AASAGSQGLIGGQVVDMEAEGQPVTLEKVNYIHNHKTGSLIRACLRLGGILGGAGEEQLA 207
Query: 240 SLRRYGRAVGVLYQVVDDILEAK---AQTPRDEEKKKKKGK-SYVAFYGVEKAMEVAEEL 295
L RYG A+G+ +Q+ DDIL+ +QT + +GK +Y A GVE + + A EL
Sbjct: 208 LLTRYGEALGLAFQITDDILDITGDFSQTGKQGGVDAARGKATYPACLGVEASRQKAGEL 267
Query: 296 RAKA 299
A+A
Sbjct: 268 CAEA 271
>gi|315924280|ref|ZP_07920504.1| geranyltranstransferase [Pseudoramibacter alactolyticus ATCC 23263]
gi|315622441|gb|EFV02398.1| geranyltranstransferase [Pseudoramibacter alactolyticus ATCC 23263]
Length = 309
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 142/246 (57%), Gaps = 14/246 (5%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P+ I +M+YS+ A G KR P++ + C +FG + A P ACA+EM+H SLIHDDLP
Sbjct: 40 PDIIVSAMKYSLFAGG-KRVRPILLMETCAMFGGDERVAIPFACAIEMIHTYSLIHDDLP 98
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPE-PRVLRVIAEI 184
MD+D RRG+P+NH VYG +IAILAGDAL + V E R + ++ +
Sbjct: 99 AMDNDDLRRGEPTNHKVYGENIAILAGDALLNAAVETAVEGIETMEPAERARGIAALSLL 158
Query: 185 ARAVGSTGMAAGQFLDLEGE------PNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEI 238
RA G GM GQ DL E + + ++ K G + + + G LAGA +DE
Sbjct: 159 MRAAGVNGMIGGQTGDLLAEDDDAINEDKIVYIHAHKTGALLTAAVLIGAVLAGASEDEQ 218
Query: 239 QSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYVAFYGVEKAMEVAE 293
Q+LR YG A+G+ +QVVDDIL+ +++T P + ++ K ++V+ +G+E A AE
Sbjct: 219 QALRNYGSAIGMAFQVVDDILDVESETAVLGKPVGSDAEESK-TTFVSLFGLESAKVKAE 277
Query: 294 ELRAKA 299
E +A
Sbjct: 278 EYHQEA 283
>gi|397906448|ref|ZP_10507248.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Caloramator
australicus RC3]
gi|397160405|emb|CCJ34585.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Caloramator
australicus RC3]
Length = 291
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 105/285 (36%), Positives = 157/285 (55%), Gaps = 18/285 (6%)
Query: 53 IDQNLEKAIT-VKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACAL 111
I++ LE+ ++ V P+ I E+M+YS+ A G KR P++C+A CE N AC++
Sbjct: 14 INKRLEELLSYVDAPQIIIEAMKYSLFA-GGKRIRPILCIAVCEALEGNLEDVLDIACSI 72
Query: 112 EMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHL 171
EM+H SLIHDDLP MD+D RRG+ +NH VYG IAILAGD L F+ ++
Sbjct: 73 EMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGDAIAILAGDGLLNYAFETLLKVIKRK- 131
Query: 172 VPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVC 226
+ R + EIA+A G TGM GQ +D+ + NL+ + E+K G++ E S
Sbjct: 132 -NDKRFVDAAFEIAKASGITGMIGGQVIDITNVGNIIDENLLVSMHERKTGKLIEASCNV 190
Query: 227 GGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEA---KAQTPRDEEKKKKKGK-SYVAF 282
G +A + ++ R Y + +GV +Q+VDDIL+ + + + K K K +YV
Sbjct: 191 GAIIANR-YEYLEITREYSKNLGVAFQIVDDILDVIGDEKKLGKSVGKDAKNNKPTYVTL 249
Query: 283 YGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
YG+EK+ E+A+E KA E ++ DN L Y +RE
Sbjct: 250 YGLEKSRELAKEFSLKAVELANKI----DNTGFLKDLTKYLLNRE 290
>gi|288574875|ref|ZP_06393232.1| Polyprenyl synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288570616|gb|EFC92173.1| Polyprenyl synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 300
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 103/253 (40%), Positives = 143/253 (56%), Gaps = 17/253 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P +++++M YS L G KR PV+C+AA EL G P A ALEMVH ASLIHDDLP
Sbjct: 34 PPRMWDAMVYS-LKVGGKRLRPVLCMAAAELLGGRSDLVLPMALALEMVHTASLIHDDLP 92
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
MDDD RRGQP+NH VYG +AILAGDAL F+ ++ P +P V++ +A A
Sbjct: 93 AMDDDVLRRGQPTNHVVYGEALAILAGDALLCQAFELPLTELPSE-IPRGNVVKAVAHFA 151
Query: 186 RAVGSTGMAAGQFLDLEGEPNLVEF-----VQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
R++G G+ GQ LD+E E + E + K + S + G L+G +++++
Sbjct: 152 RSIGPGGICGGQVLDMESEGSEEECSSPTEISTLKTAALIRTSLITGAILSGGSAEDLEA 211
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAE 293
L YG +GV +Q+ DDIL+ K EE K GK ++V+ G+E AM +
Sbjct: 212 LESYGLELGVAFQIADDILDVKGDQ---EELGKSLGKDEAHGKRTFVSDLGMEGAMRRLK 268
Query: 294 ELRAKAKEELDRF 306
E +A LDRF
Sbjct: 269 ERTERAISSLDRF 281
>gi|262411038|gb|ACY66885.1| geranyl geranyl pyrophosphate synthase [Linum usitatissimum]
Length = 215
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 91/222 (40%), Positives = 131/222 (59%), Gaps = 20/222 (9%)
Query: 114 VHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVP 173
+H SLIHDDLPCMD+D RRG+P+NH V+G D+A+LAGDAL F+H+ T VP
Sbjct: 1 IHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHMAVSTVG--VP 58
Query: 174 EPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQEKKFGEMSECSAVCG 227
+++R I E+A+++GS G+ AGQ +D+ EG N+ +EF+ K G + E S V G
Sbjct: 59 AAKIVRAIGELAKSIGSEGLVAGQVVDIDSEGLANVGLEQLEFIHLHKTGALLEASVVLG 118
Query: 228 GFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVA------ 281
L G D+E++ LR + R +G+L+QVV DIL+ T +E K GK VA
Sbjct: 119 AILGGGTDEEVEKLRSFARCIGLLFQVVGDILDV---TKSSQELGKTAGKDLVADKVTYP 175
Query: 282 -FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
G++K+ E AE+L +AK+ L F PL + +Y
Sbjct: 176 RLMGIDKSREFAEQLNTEAKQHLSGFDPI--KAAPLIALANY 215
>gi|366166849|ref|ZP_09466604.1| farnesyl-diphosphate synthase [Acetivibrio cellulolyticus CD2]
Length = 297
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/275 (36%), Positives = 151/275 (54%), Gaps = 20/275 (7%)
Query: 67 EQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPC 126
+ +Y +MRYS+LA G KR PV+ +A CEL G + P ACA+EMVH SLIHDDLP
Sbjct: 30 KSVYSAMRYSLLA-GGKRLRPVLALAVCELLGGDINEVMPFACAIEMVHTYSLIHDDLPA 88
Query: 127 MDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEP-RVLRVIAEIA 185
MD+D RRG+ +NH +G IAILAGD L L F+ ++ T + ++ ++ IA
Sbjct: 89 MDNDDFRRGKLTNHKKFGEAIAILAGDGLLNLAFELMIESTATDNCNNAVQKVKAMSYIA 148
Query: 186 RAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
++ G GM AGQ +D E E V E++ + K G + + V + A +++++S
Sbjct: 149 KSSGIHGMIAGQVIDTESENKEVAYETLEYMHKCKTGALIKAPVVSSAIICNASEEDLRS 208
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPR-------DEEKKKKKGKSYVAFYGVEKAMEVAE 293
L Y +G+ +Q+ DDIL+ + T + DE KK +YV+ YG+EK+ ++
Sbjct: 209 LEAYAGNLGLAFQIKDDILDVEGSTEKLGKKVGSDESNKK---TTYVSLYGLEKSKQM-- 263
Query: 294 ELRAKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
LR +E + K+G N L +Y RE
Sbjct: 264 -LRETTEEAIKNIGKFGPNANFLRELAEYLIVREM 297
>gi|146297123|ref|YP_001180894.1| polyprenyl synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|145410699|gb|ABP67703.1| Polyprenyl synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 298
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/275 (35%), Positives = 153/275 (55%), Gaps = 22/275 (8%)
Query: 52 EIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRI--AAFPTAC 109
+ID++L+ + P+ IYE+MRYSV A G KR P++C+ + EL AC
Sbjct: 16 KIDKHLDSLLGKNSPDVIYEAMRYSVFA-GGKRLRPILCLLSYELLSGKEADEKVLDIAC 74
Query: 110 ALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF----PLGFQHIVS 165
A+E++H SLIHDDLP MD+D RRG+P+NH V+G IAILAGDAL + F I+
Sbjct: 75 AIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAGDALLNKAAEVCFNWILR 134
Query: 166 HTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG------EPNLVEFVQEKKFGEM 219
+ + ++ + +A G+ GM GQ +D+ E NL+ + KK ++
Sbjct: 135 NK-----AKENFIKAAEYLFKASGTEGMIGGQVIDVVNSGKEITEENLLYEMHLKKTSKL 189
Query: 220 SECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL----EAKAQTPRDEEKKKKK 275
+ S VCG ++AGA ++ I YG+ +G+ +Q+ DDIL ++K + K+K
Sbjct: 190 IQASCVCGAYVAGAKEEVISDFEEYGKNLGLAFQIRDDILDFIGDSKKVGKSIGKDIKEK 249
Query: 276 GKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYG 310
++V FYG+EKA E KA E ++++ + G
Sbjct: 250 KNTFVTFYGIEKAQNYVESFSKKAIEIVEKYDRMG 284
>gi|255655210|ref|ZP_05400619.1| geranyltranstransferase [Clostridium difficile QCD-23m63]
gi|296451195|ref|ZP_06892936.1| Farnesyltranstransferase [Clostridium difficile NAP08]
gi|296880453|ref|ZP_06904415.1| Farnesyltranstransferase [Clostridium difficile NAP07]
gi|296260016|gb|EFH06870.1| Farnesyltranstransferase [Clostridium difficile NAP08]
gi|296428407|gb|EFH14292.1| Farnesyltranstransferase [Clostridium difficile NAP07]
Length = 295
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/277 (35%), Positives = 154/277 (55%), Gaps = 22/277 (7%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
Y + + E+M YS L+ G KR P++ + AC++ G N A P A A+EM+H SLIHDDL
Sbjct: 28 YQKTVIEAMNYS-LSAGGKRLRPILTLEACKIVGGNEDEAIPFAIAIEMIHTYSLIHDDL 86
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P +D+D RRG+P+NH VYG + ILAGDAL F+ +++ + PE + L+ I EI
Sbjct: 87 PALDNDDLRRGRPTNHKVYGEAMGILAGDALLNYAFEVMLAGSINKENPE-KYLKAINEI 145
Query: 185 ARAVGSTGMAAGQFLDLEGEPNLVE-----FVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A+ G GM GQ +D+E E +E ++ K M G + GA+ ++++
Sbjct: 146 AKGAGIYGMIGGQVVDVESENKQIEKEKLDYIHMNKTAAMMVGCMRAGATIGGANSEQME 205
Query: 240 SLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKK--------GKSYVAFYGVEKAMEV 291
+ +Y + +G+ +Q+VDDIL+ DE K KK +Y + G++K+ E+
Sbjct: 206 EITKYAKNIGLSFQIVDDILDIVG----DESKLGKKVGSDIENHKSTYPSLLGLDKSKEI 261
Query: 292 AEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
A L +AK+ +++ D+V L +Y DRE+
Sbjct: 262 AHNLIDEAKKSIEKLS---DDVDFLNGLAEYIIDREY 295
>gi|312622735|ref|YP_004024348.1| polyprenyl synthetase [Caldicellulosiruptor kronotskyensis 2002]
gi|312203202|gb|ADQ46529.1| Polyprenyl synthetase [Caldicellulosiruptor kronotskyensis 2002]
Length = 299
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 169/303 (55%), Gaps = 25/303 (8%)
Query: 41 DLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG-- 98
+L+ Y +I+++LEK + + PE IY++MRYSV A G KR P++C+ + ++
Sbjct: 5 ELEEYINLSQKKIEEHLEKILKERSPEIIYQAMRYSVFA-GGKRLRPLLCLLSYQMLSKD 63
Query: 99 --VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
+N+ A A+E++H SLIHDDLP MD+D RRG+P+NH V+G IAILAGDAL
Sbjct: 64 QEINQ-KVLDIASAIELIHTYSLIHDDLPAMDNDILRRGKPTNHVVFGEAIAILAGDALL 122
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFL-------DLEGEPNLVE 209
L + + + + +++ + A G GM GQ + D++ E L E
Sbjct: 123 NLAAEVCMDWILRY-GCDKNLVKAAKYLFWASGVEGMIGGQVIDITNSGQDIKSEELLFE 181
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPR-- 267
+ KK + + S VCG +AGA+DD + L YG+ +G+ +Q+ DD+L+ + +
Sbjct: 182 -MHLKKTSRLIQASCVCGALVAGAEDDVVFDLEEYGKNLGLAFQIRDDVLDVIGDSKKVG 240
Query: 268 ---DEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAA 324
++ K+KK ++V FYG+EKA ++ E KA +D KKY DN L +Y
Sbjct: 241 KSIGKDIKEKKN-TFVTFYGLEKAQQLVEHYSQKA---IDVIKKY-DNSELLIELTNYLI 295
Query: 325 DRE 327
+RE
Sbjct: 296 NRE 298
>gi|357038612|ref|ZP_09100409.1| Farnesyltranstransferase [Desulfotomaculum gibsoniae DSM 7213]
gi|355359404|gb|EHG07166.1| Farnesyltranstransferase [Desulfotomaculum gibsoniae DSM 7213]
Length = 296
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 146/274 (53%), Gaps = 15/274 (5%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
YP I+E+MRYSV A G KR P + +A G + + ACA+E++H SL+HDDL
Sbjct: 28 YPPLIHEAMRYSVFAGG-KRLRPALVLAGARAVGGDEKSVLQAACAIELLHTYSLVHDDL 86
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MD+D RRG P+NH VYG +A+LAGDAL L F + + RV+RVIAE+
Sbjct: 87 PAMDNDDFRRGNPTNHKVYGEAMAVLAGDALLTLAFGLLAGVSQTGSFGADRVVRVIAEV 146
Query: 185 ARAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A A G+ G+ GQ +D++ + +E++ K G + S G LAGA +++
Sbjct: 147 AEAAGTAGLIGGQVVDMQSTGKSIDKQTLEYIHVHKTGALYRASVRTGAILAGAAPEQLY 206
Query: 240 SLRRYGRAVGVLYQVVDDIL-----EAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEE 294
L Y +G+ +Q+VDDIL E K P + K +K +Y A +G+ A +A +
Sbjct: 207 HLTVYAENLGLAFQIVDDILDIAGDEQKLGKPIGSDTKNQK-ATYPALHGLAAARSIARQ 265
Query: 295 LRAKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
+A L F D + L F+ +RE+
Sbjct: 266 AAEQANGALASFGAEADFLRGLVCFV---INREY 296
>gi|256005455|ref|ZP_05430418.1| Polyprenyl synthetase [Clostridium thermocellum DSM 2360]
gi|385778739|ref|YP_005687904.1| polyprenyl synthetase [Clostridium thermocellum DSM 1313]
gi|419722103|ref|ZP_14249252.1| Polyprenyl synthetase [Clostridium thermocellum AD2]
gi|419724850|ref|ZP_14251907.1| Polyprenyl synthetase [Clostridium thermocellum YS]
gi|255990595|gb|EEU00714.1| Polyprenyl synthetase [Clostridium thermocellum DSM 2360]
gi|316940419|gb|ADU74453.1| Polyprenyl synthetase [Clostridium thermocellum DSM 1313]
gi|380771739|gb|EIC05602.1| Polyprenyl synthetase [Clostridium thermocellum YS]
gi|380781857|gb|EIC11506.1| Polyprenyl synthetase [Clostridium thermocellum AD2]
Length = 298
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/275 (38%), Positives = 156/275 (56%), Gaps = 21/275 (7%)
Query: 66 PEQ-IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
PE+ +Y +MRYS++A G KR PV+ +A C++ G + P ACA+EM+H SLIHDDL
Sbjct: 31 PEKSLYSAMRYSLMA-GGKRLRPVLSLAVCDMLGGSVEQVLPFACAVEMIHTYSLIHDDL 89
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MD+D RRG+P+NH VYG +AILAGD L L F+ ++ + + E R + A I
Sbjct: 90 PAMDNDDFRRGRPTNHKVYGEALAILAGDGLLNLAFEIMLENIIKNGDME-RKSKAAAVI 148
Query: 185 ARAVGSTGMAAGQFLDLEGEPNLVEF-----VQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A+A G GM AGQ +DLE E V+ + K G + + V L GAD D+IQ
Sbjct: 149 AKAAGMNGMIAGQVIDLESEGKQVDNEILNRMHRLKTGALIKAPVVSAAILCGADADDIQ 208
Query: 240 SLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVA 292
L + +G+ +Q+ DDIL+ + + E+ KK G +YV YG+EK+ E+
Sbjct: 209 KLDEFAENLGLAFQIKDDILDVEGSS---EKLGKKVGSDADNNKSTYVTVYGLEKSKEIL 265
Query: 293 EELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
++ KA +D +K+G+ L S Y +RE
Sbjct: 266 SDVTKKA---VDALEKFGEKADFLRSLAKYLLERE 297
>gi|281417549|ref|ZP_06248569.1| Polyprenyl synthetase [Clostridium thermocellum JW20]
gi|281408951|gb|EFB39209.1| Polyprenyl synthetase [Clostridium thermocellum JW20]
Length = 298
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/275 (38%), Positives = 156/275 (56%), Gaps = 21/275 (7%)
Query: 66 PEQ-IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
PE+ +Y +MRYS++A G KR PV+ +A C++ G + P ACA+EM+H SLIHDDL
Sbjct: 31 PEKSLYSAMRYSLMA-GGKRLRPVLSLAVCDMLGGSVEQVLPFACAVEMIHTYSLIHDDL 89
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MD+D RRG+P+NH VYG +AILAGD L L F+ ++ + + E R + A I
Sbjct: 90 PAMDNDDFRRGRPTNHKVYGEALAILAGDGLLNLAFEIMLENIIKNGDME-RKSKAAAVI 148
Query: 185 ARAVGSTGMAAGQFLDLEGEPNLVEF-----VQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A+A G GM AGQ +DLE E V+ + K G + + V L GAD D+IQ
Sbjct: 149 AKAAGMNGMIAGQVIDLESEGKQVDNEILNRMHRLKTGALIKAPVVSAAILCGADADDIQ 208
Query: 240 SLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVA 292
L + +G+ +Q+ DDIL+ + + E+ KK G +YV YG+EK+ E+
Sbjct: 209 KLDEFAENLGLAFQIKDDILDVEGSS---EKLGKKVGSDADNNKSTYVTVYGLEKSKEIL 265
Query: 293 EELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
++ KA +D +K+G+ L S Y +RE
Sbjct: 266 SDVTKKA---VDALEKFGEKADFLRSLAKYLLERE 297
>gi|126698801|ref|YP_001087698.1| geranyltranstransferase [Clostridium difficile 630]
gi|254974740|ref|ZP_05271212.1| geranyltranstransferase [Clostridium difficile QCD-66c26]
gi|255092129|ref|ZP_05321607.1| geranyltranstransferase [Clostridium difficile CIP 107932]
gi|255100220|ref|ZP_05329197.1| geranyltranstransferase [Clostridium difficile QCD-63q42]
gi|255306109|ref|ZP_05350281.1| geranyltranstransferase [Clostridium difficile ATCC 43255]
gi|255313866|ref|ZP_05355449.1| geranyltranstransferase [Clostridium difficile QCD-76w55]
gi|255516547|ref|ZP_05384223.1| geranyltranstransferase [Clostridium difficile QCD-97b34]
gi|255649647|ref|ZP_05396549.1| geranyltranstransferase [Clostridium difficile QCD-37x79]
gi|260682811|ref|YP_003214096.1| geranyltranstransferase [Clostridium difficile CD196]
gi|260686409|ref|YP_003217542.1| geranyltranstransferase [Clostridium difficile R20291]
gi|306519764|ref|ZP_07406111.1| geranyltranstransferase [Clostridium difficile QCD-32g58]
gi|384360393|ref|YP_006198245.1| geranyltranstransferase [Clostridium difficile BI1]
gi|115250238|emb|CAJ68059.1| Geranyltranstransferase [Clostridium difficile 630]
gi|260208974|emb|CBA62025.1| geranyltranstransferase [Clostridium difficile CD196]
gi|260212425|emb|CBE03292.1| geranyltranstransferase [Clostridium difficile R20291]
Length = 295
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/276 (35%), Positives = 155/276 (56%), Gaps = 20/276 (7%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
Y + + E+M YS L+ G KR P++ + AC++ G N A P A A+EM+H SLIHDDL
Sbjct: 28 YQKTVIEAMNYS-LSAGGKRLRPILTLEACKIVGGNEDEAIPFAIAIEMIHTYSLIHDDL 86
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P +D+D RRG+P+NH VYG + ILAGDAL F+ +++ + PE + L+ I EI
Sbjct: 87 PALDNDDLRRGRPTNHKVYGEAMGILAGDALLNYAFEVMLAGSINKENPE-KYLKAINEI 145
Query: 185 ARAVGSTGMAAGQFLDLEGEPNLVE-----FVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A+ G GM GQ +D+E E +E ++ K M G + GA+ ++++
Sbjct: 146 AKGAGIYGMIGGQVVDVESENKQIEKEKLDYIHMNKTAAMMVGCMRAGATIGGANSEQME 205
Query: 240 SLRRYGRAVGVLYQVVDDIL-----EAK--AQTPRDEEKKKKKGKSYVAFYGVEKAMEVA 292
+ +Y + +G+ +Q+VDDIL EAK + D E K +Y + G++K+ E+A
Sbjct: 206 EITKYAKNIGLSFQIVDDILDIVGDEAKLGKKVGSDIENHK---STYPSLLGLDKSKEIA 262
Query: 293 EELRAKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
L +AK+ +++ D+V L +Y DRE+
Sbjct: 263 HNLIDEAKKSIEKLS---DDVDFLKGLAEYIIDREY 295
>gi|282855621|ref|ZP_06264935.1| geranyltranstransferase [Pyramidobacter piscolens W5455]
gi|282586551|gb|EFB91805.1| geranyltranstransferase [Pyramidobacter piscolens W5455]
Length = 297
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/273 (35%), Positives = 155/273 (56%), Gaps = 14/273 (5%)
Query: 64 KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDD 123
+ P ++ E+M YS+LA G KR P++C+A E+ G + P A A EM H ASLIHDD
Sbjct: 28 RIPARLREAMNYSLLA-GGKRLRPILCMAGAEIMGEKAESVLPMATAFEMAHTASLIHDD 86
Query: 124 LPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAE 183
LPCMD+D RRG+P+NH VYG +A+LAGDALF F+ ++ + R +R +A
Sbjct: 87 LPCMDNDSLRRGKPTNHVVYGESLALLAGDALFLDAFETALAGLLKNGAEPQRCVRALAL 146
Query: 184 IARAVGSTGMAAGQFLDLE-----GEPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEI 238
A+A+G G+ GQ LD + E + V V K + S G LAGAD + +
Sbjct: 147 FAQALGPEGICGGQVLDTDRASQTDERDFVVDVASMKTMVLIRASLCAGAILAGADGEAL 206
Query: 239 QSLRRYGRAVGVLYQVVDDILE------AKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVA 292
+ L +YG VG+ +Q+ DD+L+ A +T +E + K +++V YG++ A +
Sbjct: 207 RRLMKYGENVGLAFQIADDLLDCTGSQSAMGKTLGKDEAQDK--RTFVRAYGLDGARALL 264
Query: 293 EELRAKAKEELDRFKKYGDNVLPLYSFIDYAAD 325
E A+++L+ F + G + L +++++ ++
Sbjct: 265 HEKTLNAEKQLEPFAEKGAFLRALAAYLEHRSN 297
>gi|125973349|ref|YP_001037259.1| farnesyl-diphosphate synthase [Clostridium thermocellum ATCC 27405]
gi|125713574|gb|ABN52066.1| Polyprenyl synthetase [Clostridium thermocellum ATCC 27405]
Length = 295
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/275 (38%), Positives = 156/275 (56%), Gaps = 21/275 (7%)
Query: 66 PEQ-IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
PE+ +Y +MRYS++A G KR PV+ +A C++ G + P ACA+EM+H SLIHDDL
Sbjct: 28 PEKSLYSAMRYSLMA-GGKRLRPVLSLAVCDMLGGSVEQVLPFACAVEMIHTYSLIHDDL 86
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MD+D RRG+P+NH VYG +AILAGD L L F+ ++ + + E R + A I
Sbjct: 87 PAMDNDDFRRGRPTNHKVYGEALAILAGDGLLNLAFEIMLENIIKNGDME-RKSKAAAVI 145
Query: 185 ARAVGSTGMAAGQFLDLEGEPNLVEF-----VQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A+A G GM AGQ +DLE E V+ + K G + + V L GAD D+IQ
Sbjct: 146 AKAAGMNGMIAGQVIDLESEGKQVDNEILNRMHRLKTGALIKAPVVSAAILCGADADDIQ 205
Query: 240 SLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVA 292
L + +G+ +Q+ DDIL+ + + E+ KK G +YV YG+EK+ E+
Sbjct: 206 KLDEFAENLGLAFQIKDDILDVEGSS---EKLGKKVGSDADNNKSTYVTVYGLEKSKEIL 262
Query: 293 EELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
++ KA +D +K+G+ L S Y +RE
Sbjct: 263 SDVTKKA---VDALEKFGEKADFLRSLAKYLLERE 294
>gi|402815138|ref|ZP_10864731.1| farnesyl diphosphate synthase [Paenibacillus alvei DSM 29]
gi|402507509|gb|EJW18031.1| farnesyl diphosphate synthase [Paenibacillus alvei DSM 29]
Length = 307
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/245 (39%), Positives = 139/245 (56%), Gaps = 12/245 (4%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
PE + +SM YS++A G KR P+ + AC+ N AA P ACA+EM+H SL+HDDLP
Sbjct: 39 PEPLTQSMLYSLMAGG-KRLRPICVLMACDSLNGNTQAAEPVACAVEMIHTYSLVHDDLP 97
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
MD+D RRG+P+NH V+G +AILAGD L FQ IV T H VP L ++ E+A
Sbjct: 98 AMDNDDFRRGKPTNHKVFGEAMAILAGDGLLTRAFQCIVQSTRKHGVPADVSLSIVEELA 157
Query: 186 RAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
G +GM GQ D+ GE + +E++ K ++ S GG +AGA + ++Q+
Sbjct: 158 EFAGMSGMVGGQAADMLGEQGITTLDQLEYIHMHKTSDLIVFSLRSGGRIAGASELQLQA 217
Query: 241 LRRYGRAVGVLYQVVDDIL-----EAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEEL 295
L YG +G+ +Q+ DD+L E P+ + K K +Y F G+E++ E L
Sbjct: 218 LTTYGSKLGLAFQIQDDVLDIIGDETMLGKPKGSDVKSGK-VTYPYFIGLEESKREVERL 276
Query: 296 RAKAK 300
+AK
Sbjct: 277 TEEAK 281
>gi|77176929|gb|ABA64563.1| geranylgeranyl pyrophosphate synthase [Carica papaya]
Length = 214
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/208 (42%), Positives = 129/208 (62%), Gaps = 18/208 (8%)
Query: 112 EMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHL 171
EM+H SLIHDDLPCMD+D RRG+P+NH V+G D+A+LAGDAL F+H+ T
Sbjct: 1 EMMHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFSFEHLAVATVG-- 58
Query: 172 VPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQEKKFGEMSECSAV 225
V R++R I E+A+++G+ G+ AGQ +D+ EG ++ +EF+ K + E + V
Sbjct: 59 VDPSRIVRAIKELAKSIGTEGLVAGQVVDICSEGMTDVGLEHLEFIHVHKTAALLEAAVV 118
Query: 226 CGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVA---- 281
G L G D+EI+ LR++ R +G+L+QVVDDIL+ T +E K GK VA
Sbjct: 119 LGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDV---TKSSQELGKTAGKDLVAEKVT 175
Query: 282 ---FYGVEKAMEVAEELRAKAKEELDRF 306
G+EK+ E+AE+L A+E+L F
Sbjct: 176 YPKLMGIEKSRELAEKLNKDAQEQLRDF 203
>gi|334341587|ref|YP_004546567.1| polyprenyl synthetase [Desulfotomaculum ruminis DSM 2154]
gi|334092941|gb|AEG61281.1| Polyprenyl synthetase [Desulfotomaculum ruminis DSM 2154]
Length = 296
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/250 (38%), Positives = 149/250 (59%), Gaps = 18/250 (7%)
Query: 53 IDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG--VNRIAAFPTA 108
+D+ LEK + ++P I+E+MRYSV A G KR P++ +AA E G +A P A
Sbjct: 14 VDEALEKYLPPDHEHPAVIHEAMRYSVFA-GGKRLRPILVLAAAEAVGDEAGAASAMPVA 72
Query: 109 CALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTP 168
CALE++H SL+HDDLP MD+D RRG+P+NH VYG +AILAGDAL F+ ++ +
Sbjct: 73 CALELIHTYSLVHDDLPAMDNDDFRRGRPTNHKVYGEAMAILAGDALLTTAFE-LMGQSA 131
Query: 169 PHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL-----EGEPNLVEFVQEKKFGEMSECS 223
P+ V RV+ EIA+A GS G+ GQ +D + E +++E++ K G + +
Sbjct: 132 GKFSPQA-VNRVVVEIAQAAGSQGLIGGQVVDTLSENKKVEASVLEYIHRHKTGALFRAA 190
Query: 224 AVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKS 278
G L GA ++++Q+L Y +G+ +Q+ DD+L+ + + P + K +K +
Sbjct: 191 IRSGAILNGASEEQLQALTVYAEQMGLAFQIKDDLLDIEGEQEKIGKPVGSDVKNQKA-T 249
Query: 279 YVAFYGVEKA 288
Y A YG+EKA
Sbjct: 250 YPALYGMEKA 259
>gi|222528996|ref|YP_002572878.1| polyprenyl synthetase [Caldicellulosiruptor bescii DSM 6725]
gi|222455843|gb|ACM60105.1| Polyprenyl synthetase [Caldicellulosiruptor bescii DSM 6725]
Length = 299
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 163/291 (56%), Gaps = 23/291 (7%)
Query: 52 EIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIA---AFPTA 108
++++NLEK + + PE IY++MRYSV A G KR P++C+ + ++ ++I A
Sbjct: 16 KVEENLEKILKERSPEIIYQAMRYSVFA-GGKRLRPLLCLLSYQMVSKDQIVDEKILDIA 74
Query: 109 CALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTP 168
A+E++H SLIHDDLP MD+D RRG+P+NH V+G IAILAGDAL L + +
Sbjct: 75 SAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAGDALLNLAAEVCMDWIL 134
Query: 169 PHLVPEPRVLRVIAEIARAVGSTGMAAGQFL-------DLEGEPNLVEFVQEKKFGEMSE 221
+ + +++ + A G GM GQ + D++ E L E + KK + +
Sbjct: 135 RY-GCDKNLVKAAKYLFWASGVEGMIGGQVIDITNSGQDIKSEELLFE-MHLKKTSRLIQ 192
Query: 222 CSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPR-----DEEKKKKKG 276
S VCG +A A+DD + L YG+ +G+ +Q+ DD+L+ + + ++ K+KK
Sbjct: 193 ASCVCGALVAAAEDDVVSDLEEYGKNLGLAFQIRDDVLDVIGDSKKVGKSIGKDIKEKKN 252
Query: 277 KSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
++V FYG+ KA ++ E KA +D KKY DN L +Y +RE
Sbjct: 253 -TFVTFYGLGKAQQLVEHYSKKA---IDVIKKY-DNSELLIELTNYLINRE 298
>gi|189425242|ref|YP_001952419.1| polyprenyl synthetase [Geobacter lovleyi SZ]
gi|189421501|gb|ACD95899.1| Polyprenyl synthetase [Geobacter lovleyi SZ]
Length = 297
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 117/309 (37%), Positives = 169/309 (54%), Gaps = 34/309 (11%)
Query: 40 FDLKTYWTTLITEIDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
DLK Y I +D LE+ + + P+ ++++MRYS+ A G KR PV+ +AACE
Sbjct: 1 MDLKVYLKEKIALVDAALEQYLPKEEERPQSLHKAMRYSIFA-GGKRVRPVLMLAACEAV 59
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G A P ACA+EM+H SLIHDDLP MDDD RRG+P+NH V+G IAILAGD L
Sbjct: 60 GGQIDKAMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDGLLT 119
Query: 158 LGFQHIVSHTPPHLVPEPRV---------LRVIAEIARAVGSTGMAAGQFLDL--EGEPN 206
F+ L+ +PR L VI EIA G+ GM GQ +D+ EG+P+
Sbjct: 120 EAFK---------LMSDPRFAAGIDPAARLGVIHEIATCAGTYGMVGGQVVDMESEGKPD 170
Query: 207 L----VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAK 262
+ V+++ K G + + S V G L GADD ++ ++RRYG A G+ +Q+ DDIL+ +
Sbjct: 171 MDLPTVQYIHAHKTGALIKASVVAGALLGGADDKQLAAIRRYGEAAGLAFQIADDILDIE 230
Query: 263 AQTP---RDEEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYS 318
T +D + +GK +Y A G+ A +E +A E + + G PL +
Sbjct: 231 GTTEEIGKDAGSDEARGKATYPAVMGLAAA---KQEAQAMMDEAMLALEPLGAAAEPLRA 287
Query: 319 FIDYAADRE 327
Y +R+
Sbjct: 288 IARYIVERK 296
>gi|319651489|ref|ZP_08005617.1| geranyltranstransferase [Bacillus sp. 2_A_57_CT2]
gi|317396804|gb|EFV77514.1| geranyltranstransferase [Bacillus sp. 2_A_57_CT2]
Length = 296
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/274 (37%), Positives = 151/274 (55%), Gaps = 20/274 (7%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P ++ ESM YS+ A G KR P++ A+ FG + TA A+EMVH SLIHDDLP
Sbjct: 30 PPEVKESMLYSLEA-GGKRIRPMLLFASLAAFGEDTSKGLWTAAAIEMVHTYSLIHDDLP 88
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
MD+D RRG+P+NH V+G AILAGDAL FQ ++ TP L +I E++
Sbjct: 89 SMDNDDLRRGKPTNHKVFGEAFAILAGDALLTYSFQ-TIAETPDEFASAETKLSLIKELS 147
Query: 186 RAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G+ GM GQ D++GE +E++ K G++ ECS V G LA A + IQ+
Sbjct: 148 KASGAEGMVGGQAADIKGEGKQLGLEDLEYIHVHKTGKLLECSVVSGAILANASQETIQA 207
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQ-------TPRDEEKKKKKGKSYVAFYGVEKAMEVAE 293
L ++ +G+ +Q+ DDIL+ + DE K K S ++ G ++A+E E
Sbjct: 208 LSKFAYHLGLAFQIRDDILDLEGTEEIIGKPVGSDESKDKSTYPSLLSMSGAKEALE--E 265
Query: 294 ELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+R+ AKE+L ++ G L D A+R+
Sbjct: 266 HIRS-AKEKL---RETGLQTELLEEITDLIANRD 295
>gi|423082397|ref|ZP_17070989.1| putative geranyltranstransferase [Clostridium difficile
002-P50-2011]
gi|423087809|ref|ZP_17076195.1| putative geranyltranstransferase [Clostridium difficile
050-P50-2011]
gi|357544123|gb|EHJ26129.1| putative geranyltranstransferase [Clostridium difficile
050-P50-2011]
gi|357548723|gb|EHJ30583.1| putative geranyltranstransferase [Clostridium difficile
002-P50-2011]
Length = 295
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/276 (35%), Positives = 155/276 (56%), Gaps = 20/276 (7%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
Y + + E+M YS L+ G KR P++ + AC++ G N A P A A+EM+H SLIHDDL
Sbjct: 28 YQKTVIEAMNYS-LSAGGKRLRPILTLEACKIVGGNEDEAIPFAIAIEMIHTYSLIHDDL 86
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P +D+D RRG+P+NH VYG + ILAGDAL F+ +++ + PE + L+ I EI
Sbjct: 87 PALDNDDLRRGRPTNHKVYGEAMGILAGDALLNYAFEVMLAGSINKENPE-KYLKAINEI 145
Query: 185 ARAVGSTGMAAGQFLDLEGEPNLVE-----FVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A+ G GM GQ +D+E E +E ++ K M G + GA+ ++++
Sbjct: 146 AKGAGIYGMIGGQVVDVESENKQIEKEKLDYIHMNKTAAMMVGCMRAGATIGGANFEQME 205
Query: 240 SLRRYGRAVGVLYQVVDDIL-----EAK--AQTPRDEEKKKKKGKSYVAFYGVEKAMEVA 292
+ +Y + +G+ +Q+VDDIL EAK + D E K +Y + G++K+ E+A
Sbjct: 206 EITKYAKNIGLSFQIVDDILDIVGDEAKLGKKVGSDIENHK---STYPSLLGLDKSKEIA 262
Query: 293 EELRAKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
L +AK+ +++ D+V L +Y DRE+
Sbjct: 263 HNLIDEAKKSIEKLS---DDVDFLKGLAEYIIDREY 295
>gi|329924775|ref|ZP_08279764.1| geranyltranstransferase [Paenibacillus sp. HGF5]
gi|328940440|gb|EGG36763.1| geranyltranstransferase [Paenibacillus sp. HGF5]
Length = 304
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 147/247 (59%), Gaps = 12/247 (4%)
Query: 64 KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDD 123
K PE + SM YS++A G KR P++ +AACE G +R AA P ACA+EMVH SLIHDD
Sbjct: 34 KVPETLSRSMSYSLMAGG-KRMRPLLVIAACEAGGGSREAAVPVACAVEMVHTYSLIHDD 92
Query: 124 LPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAE 183
LP MDDD RRG+P+NH V+G AILAGDAL F ++ H VP RVL ++ +
Sbjct: 93 LPAMDDDDYRRGKPTNHKVFGEASAILAGDALLTHAFYSVIQAARKHGVPAERVLSIVED 152
Query: 184 IARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCGGFLAGADDDEI 238
+A G GM GQ D+EGE + +E++ K ++ S + GG +AG D +I
Sbjct: 153 LAEYAGPRGMVGGQVADMEGEQGITTLEQLEYIHLHKTSDLIMFSLMAGGHVAGCSDAQI 212
Query: 239 QSLRRYGRAVGVLYQVVDDIL-----EAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAE 293
+SLR +G +G+ +Q+ DDIL E+K P + K++K +Y F G++ + E
Sbjct: 213 ESLRTFGHHIGLAFQIQDDILDLVGDESKLGKPVQSDVKQEK-VTYPYFIGLDASRHEVE 271
Query: 294 ELRAKAK 300
L A+AK
Sbjct: 272 RLTAEAK 278
>gi|374993734|ref|YP_004969233.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus orientis
DSM 765]
gi|357212100|gb|AET66718.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus orientis
DSM 765]
Length = 288
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 104/251 (41%), Positives = 141/251 (56%), Gaps = 13/251 (5%)
Query: 69 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMD 128
I ESMRYS++ G KR PV+ +A+ E G A A ALE++H SLIHDDLP MD
Sbjct: 27 INESMRYSLIG-GGKRIRPVLALASAETVGGKPEAILQAAVALELIHTYSLIHDDLPAMD 85
Query: 129 DDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAV 188
+D RRG+ SNH V+G AILAGDAL F+ + H PE R+LRVI E+A A
Sbjct: 86 NDDYRRGRLSNHKVFGEAQAILAGDALLTYAFELL--GNLDHAQPE-RLLRVITEVAMAA 142
Query: 189 GSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRR 243
G GM GQ LDL GE N +E + + K G + SA GG L G +DEI +L
Sbjct: 143 GKDGMVGGQVLDLAGEGRDLTLNEIEEIHKAKTGAILTVSARLGGILGGGSEDEIDALTE 202
Query: 244 YGRAVGVLYQVVDDILEAKAQTP---RDEEKKKKKGKS-YVAFYGVEKAMEVAEELRAKA 299
Y +++G+ +Q+ DDIL+ + + ++GKS YV+ G+E A + + KA
Sbjct: 203 YAQSLGLAFQIKDDILDIVGDSETLGKPAGSDLRQGKSTYVSLLGLEGASKQLHDQIIKA 262
Query: 300 KEELDRFKKYG 310
+ L+ F G
Sbjct: 263 QAALEPFADKG 273
>gi|206889920|ref|YP_002248053.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps)
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741858|gb|ACI20915.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps)
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 295
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 110/278 (39%), Positives = 161/278 (57%), Gaps = 23/278 (8%)
Query: 62 TVKYPEQIYESMRYSVLAKGTKRAPPVMCVA---ACELFGVNRIAAFPTACALEMVHAAS 118
T P +++S+ YS+ A G KR P++C+A AC+ G+ I P A A+E +H S
Sbjct: 26 TFPTPPILHDSVLYSLTA-GGKRLRPILCIASYEACD--GMENIV--PYATAIEFIHTYS 80
Query: 119 LIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVL 178
LIHDDLP MD+D RRG+P+NH V+G IAILAGD L F I+S+ + +L
Sbjct: 81 LIHDDLPAMDNDDLRRGKPTNHKVFGEGIAILAGDGLLTEAFT-ILSNKDYANISSNTLL 139
Query: 179 RVIAEIARAVGSTGMAAGQFLDL--EG-EPN--LVEFVQEKKFGEMSECSAVCGGFLAGA 233
+VI+EI++A G GM AGQ DL EG EP+ +VEF+ K M + S G LA A
Sbjct: 140 KVISEISKAAGLRGMVAGQAYDLISEGKEPDERVVEFIHLYKTAAMIKASVKVGAILAEA 199
Query: 234 DDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYVAFYGVEKA 288
+++I++L YG+++G+ +Q+VDDIL+ + T P+ + +K K +Y +G+EK+
Sbjct: 200 SEEKIKNLEIYGQSIGLAFQIVDDILDIEGTTEAMGKPKGSDIEKGK-MTYPRVFGIEKS 258
Query: 289 MEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
+ A+EL KA E L F + PL Y R
Sbjct: 259 KQKAKELIDKALESLTMFNHKAE---PLREIAHYIIKR 293
>gi|261405955|ref|YP_003242196.1| poluprenyl synthetase [Paenibacillus sp. Y412MC10]
gi|261282418|gb|ACX64389.1| Polyprenyl synthetase [Paenibacillus sp. Y412MC10]
Length = 307
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 147/247 (59%), Gaps = 12/247 (4%)
Query: 64 KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDD 123
K PE + SM YS++A G KR P++ +AACE G +R AA P ACA+EMVH SLIHDD
Sbjct: 37 KVPETLSRSMSYSLMAGG-KRMRPLLVIAACEAGGGSREAAVPVACAVEMVHTYSLIHDD 95
Query: 124 LPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAE 183
LP MDDD RRG+P+NH V+G AILAGDAL F ++ H VP RVL ++ +
Sbjct: 96 LPAMDDDDYRRGKPTNHKVFGEASAILAGDALLTHAFYSVIQAARKHGVPAERVLSIVED 155
Query: 184 IARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCGGFLAGADDDEI 238
+A G GM GQ D+EGE + +E++ K ++ S + GG +AG D +I
Sbjct: 156 LAVYAGPRGMVGGQVADMEGEQGITTLEQLEYIHLHKTSDLIMFSLMAGGHVAGCSDSQI 215
Query: 239 QSLRRYGRAVGVLYQVVDDIL-----EAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAE 293
+SLR +G +G+ +Q+ DDIL E+K P + K++K +Y F G++ + E
Sbjct: 216 ESLRTFGHHIGLAFQIQDDILDLVGDESKLGKPVQSDVKQEK-VTYPYFIGLDASRHEVE 274
Query: 294 ELRAKAK 300
L A+AK
Sbjct: 275 RLTAEAK 281
>gi|51246551|ref|YP_066435.1| geranylgeranyl pyrophosphate synthase [Desulfotalea psychrophila
LSv54]
gi|50877588|emb|CAG37428.1| probable geranylgeranyl pyrophosphate synthase [Desulfotalea
psychrophila LSv54]
Length = 298
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 100/265 (37%), Positives = 140/265 (52%), Gaps = 20/265 (7%)
Query: 71 ESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAA---FPTACALEMVHAASLIHDDLPCM 127
E+MRYS+ A G KR P++C+AA + P ACALE +H SLIHDDLP M
Sbjct: 34 EAMRYSLFAGG-KRIRPILCLAAADSICAQERTQENLLPVACALECIHTYSLIHDDLPAM 92
Query: 128 DDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARA 187
DDD RRG+ +NH +YG AILAGD L F I +L E R L + +ARA
Sbjct: 93 DDDQLRRGKATNHVLYGEAGAILAGDGLLSWAFDLIADRGKGNLTAEKR-LDICHMVARA 151
Query: 188 VGSTGMAAGQFLDLEGEPNLVEF-----VQEKKFGEMSECSAVCGGFLAGADDDEIQSLR 242
GS GM GQ LD++ E ++F + K G + CS + G AGA+ ++ +L
Sbjct: 152 AGSLGMVGGQQLDIQSENKEIDFDTLATIHRSKTGALITCSIMSGAIGAGANAKQLHALE 211
Query: 243 RYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEEL 295
YG +G+ +Q++DD+L+A A T EE K G +Y F+G++K E A+
Sbjct: 212 EYGNNIGLAFQIIDDLLDATATT---EELGKTAGSDAEHGKATYPLFFGIDKTREKAKAA 268
Query: 296 RAKAKEELDRFKKYGDNVLPLYSFI 320
A + L F D + L ++I
Sbjct: 269 VDNAIKALTLFDHRADPLRGLANYI 293
>gi|451948109|ref|YP_007468704.1| geranylgeranyl pyrophosphate synthase [Desulfocapsa sulfexigens DSM
10523]
gi|451907457|gb|AGF79051.1| geranylgeranyl pyrophosphate synthase [Desulfocapsa sulfexigens DSM
10523]
Length = 298
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 109/282 (38%), Positives = 149/282 (52%), Gaps = 24/282 (8%)
Query: 60 AITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRI---AAFPTACALEMVHA 116
A T + + I E+MRYS+LA G KR P++C+AA G N I P ACALE +H
Sbjct: 24 AATGDFAKHI-EAMRYSLLAGG-KRVRPILCIAAARAVGGNTIDDQNILPVACALECIHT 81
Query: 117 ASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPR 176
SLIHDDLP MD+D RRG+ +NH +YG AILAGD L F + + + +L E +
Sbjct: 82 YSLIHDDLPAMDNDALRRGKATNHVLYGEAGAILAGDGLLTWAFDLLCNPSHGNLDSEKK 141
Query: 177 VLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----VQEKKFGEMSECSAVCGGFLA 231
L + IA A GS GM GQ LD+ E F + K G + S V G A
Sbjct: 142 -LAISHCIAHAAGSFGMVGGQALDIASENTRFPFETLQTIHRSKTGALITASVVSGAIAA 200
Query: 232 GADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYG 284
GAD ++ ++L++YG +G+ +Q+VDD+L A A T E+ K G +Y A++G
Sbjct: 201 GADREQSEALKQYGHQIGLAFQIVDDLLNATATT---EQLGKAAGSDIELGKATYPAYFG 257
Query: 285 VEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
+E+ + A KAK L K + D PL DY R
Sbjct: 258 IEETRKRALNAIEKAKTCL---KDFDDKAQPLRLLADYIYTR 296
>gi|5631297|dbj|BAA82614.1| farnesyl diphosphate synthase (SelFPS) [Synechococcus elongatus]
Length = 300
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 106/277 (38%), Positives = 155/277 (55%), Gaps = 24/277 (8%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P++++++MRY+VL G KR P++C AA E+ G A ALE++H SL+HDDLP
Sbjct: 34 PQRLHQAMRYAVLGGG-KRVRPLLCYAAGEVSGAELERLSTAAAALELIHVYSLVHDDLP 92
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRV-LRVIAEI 184
CMDDD RRG+P+ H Y A+LAGD+L L FQ + + + P+ LR++ +
Sbjct: 93 CMDDDVLRRGKPTCHVEYDEATALLAGDSLQSLAFQLLAEY---RVADSPQTQLRMLEHL 149
Query: 185 ARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAV----CGGFLAGADD 235
ARA GS GMA GQ +DLE +EF+ K G + S + CG LA D
Sbjct: 150 ARAAGSRGMAGGQAIDLEATGKTLTLPELEFMHIHKTGALIRASVILGANCGRALASKDM 209
Query: 236 DEIQSLRRYGRAVGVLYQVVDDILEAKAQTP---RDEEKKKKKGK-SYVAFYGVEKAMEV 291
D L + + +G+ +QVVDD+L+A++ T + K ++GK +YV+ GVE A +
Sbjct: 210 DR---LDHFAKRIGLAFQVVDDVLDAQSTTATLGKTAGKDARQGKPTYVSTVGVEAARAM 266
Query: 292 AEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
A+EL+ +A E L F G+ L +Y REF
Sbjct: 267 AQELKREAVESLAPF---GERARRLRELAEYIVSREF 300
>gi|414154704|ref|ZP_11411021.1| Farnesyl diphosphate synthase [Desulfotomaculum hydrothermale Lam5
= DSM 18033]
gi|411453535|emb|CCO08925.1| Farnesyl diphosphate synthase [Desulfotomaculum hydrothermale Lam5
= DSM 18033]
Length = 294
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 155/293 (52%), Gaps = 16/293 (5%)
Query: 40 FDLKTYWTTLITEIDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
K T ++D+ L + YP ++E+MRYSV A G KR P++ +AA +
Sbjct: 1 MSFKEQLTAWARQVDEALHNYLPPADAYPAVLHEAMRYSVFAGG-KRLRPILVLAAAKAV 59
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G N P ACALE++H SL+HDDLP MD+D RRG+P+NH VYG AIL GDAL
Sbjct: 60 GGNTDKIMPVACALELIHTYSLVHDDLPAMDNDDYRRGRPTNHKVYGEATAILVGDALLT 119
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL-----EGEPNLVEFVQ 212
L F+ + P V RV EIA+A GS G+ GQ +DL + E +++E++
Sbjct: 120 LAFELVARCGED--CPPAAVNRVAREIAQAAGSRGLIGGQVVDLLSENKQIESSVLEYIH 177
Query: 213 EKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL-----EAKAQTPR 267
K G + + G L GA + ++ +L Y +G+ +Q+ DD+L EAK P
Sbjct: 178 RHKTGALFRAAVRAGAILGGAGEAQLAALTTYAEQMGLAFQIKDDLLDIEGDEAKIGKPV 237
Query: 268 DEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+ K +K +Y + YG++ A +A+E +A L+ F + + + FI
Sbjct: 238 GSDIKNQK-VTYPSLYGLDGARRMADEAAREAVTALNIFGPEAEFLRLMMHFI 289
>gi|354558197|ref|ZP_08977453.1| Polyprenyl synthetase [Desulfitobacterium metallireducens DSM
15288]
gi|353548922|gb|EHC18366.1| Polyprenyl synthetase [Desulfitobacterium metallireducens DSM
15288]
Length = 288
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 163/296 (55%), Gaps = 22/296 (7%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPE-QIYESMRYSVLAKGTKRAPPVMCVAACELFGVN 100
+T + + + +ID LE + + E + +SMRYS L G KR PV+ +AA E G
Sbjct: 2 FRTSFESYVEKIDAFLE---CLSWDEGTMGQSMRYS-LVGGGKRIRPVLALAAAEAVGGQ 57
Query: 101 RIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGF 160
+ P+ACALE++H SLIHDDLP MD+D RRG+ +NH V+G AILAGD L F
Sbjct: 58 ADSILPSACALELIHTYSLIHDDLPAMDNDDYRRGRLANHKVFGEGKAILAGDGLLTYAF 117
Query: 161 QHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKK 215
+ I P V R LRVI E+A+A G GM GQ LDLE E +E + + K
Sbjct: 118 ELIARPLP---VNAERQLRVIQEVAQAAGPEGMVLGQVLDLEAEGKTLTLGEIEQIHQHK 174
Query: 216 FGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEE 270
G M SA GG L G + +IQ+L RY +A+G+ +Q+ DDIL+ + + P +
Sbjct: 175 TGAMLVVSARMGGILGGGTEAQIQALTRYAQALGLAFQIKDDILDLEGDSATLGKPAQSD 234
Query: 271 KKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
+++K +Y + G+ A EEL K KE + + +V L+S DY ADR
Sbjct: 235 LEQEK-STYPSLLGLAGA---KEELAVKIKEAHEALSVFTQSVDFLHSLADYIADR 286
>gi|312793194|ref|YP_004026117.1| polyprenyl synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312180334|gb|ADQ40504.1| Polyprenyl synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 299
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 104/301 (34%), Positives = 167/301 (55%), Gaps = 23/301 (7%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNR 101
L+ Y +++++LEK + + PE IY++MRYSV A G KR P++C+ + ++ ++
Sbjct: 6 LEEYINLSQKKVEEHLEKILAERSPEIIYQAMRYSVFA-GGKRLRPLLCLLSYQMLSKDQ 64
Query: 102 IA---AFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
A A+E++H SLIHDDLP MD+D RRG+P+NH V+G IAILAGDAL L
Sbjct: 65 EVDQKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAGDALLNL 124
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFL-------DLEGEPNLVEFV 211
+ + + E +++ + A G GM GQ + D++ E L E +
Sbjct: 125 AAEVCMDWILRY-GCEKNLVKAAKYLFWASGVEGMIGGQVIDITNSGQDIKSEELLFE-M 182
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPR---- 267
KK + + S VCG +AGA+DD + + +G+ +G+ +Q+ DDIL+ + +
Sbjct: 183 HLKKTSRLIQASCVCGALVAGAEDDVVYDMEEFGKNLGLAFQIRDDILDVIGDSKKVGKS 242
Query: 268 -DEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
++ K+KK ++V FYG+EKA ++ E KA +D +KY DN L +Y +R
Sbjct: 243 IGKDIKEKKN-TFVTFYGLEKAQQLVEHYSQKA---IDVIQKY-DNSELLIELTNYLINR 297
Query: 327 E 327
E
Sbjct: 298 E 298
>gi|292670718|ref|ZP_06604144.1| geranyltranstransferase [Selenomonas noxia ATCC 43541]
gi|292647664|gb|EFF65636.1| geranyltranstransferase [Selenomonas noxia ATCC 43541]
Length = 291
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/298 (35%), Positives = 148/298 (49%), Gaps = 20/298 (6%)
Query: 42 LKTYWTTLITEIDQNL--EKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
+K W I++ L E A T + E+M YS++A G KR P++ +AA + G
Sbjct: 1 MKELWRNRQELIERALRDELAKTDILDNTLREAMEYSLMAGG-KRLRPILLMAAADAVGS 59
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+ P ACALEM+H SLIHDDLP MD+D RRG+ +NH VYG IAILAGDAL L
Sbjct: 60 DGTKLLPAACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGDGIAILAGDALLTLA 119
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----VQEK 214
F ++ VP +LRV+ EI+RA G+ GM GQ LDL+ E + V
Sbjct: 120 FTVLLRQKD---VPAVSLLRVVDEISRAAGAEGMVGGQVLDLQAENKTISLDELRRVHMG 176
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDE 269
K G + + G L GA + ++ +L Y G+ +Q+ DDIL+ P
Sbjct: 177 KTGALFHAALRSGAILGGASEQQLTALTAYADHFGLAFQITDDILDVVGNAEDIGKPVGS 236
Query: 270 EKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
++K K +YV + A E+A R E L +G L + Y +R+
Sbjct: 237 DEKNHK-STYVTLTSLSAAQELA---RRTVDEALAALAVFGSEASFLRELVSYLVNRK 290
>gi|320529116|ref|ZP_08030208.1| putative geranyltranstransferase [Selenomonas artemidis F0399]
gi|320138746|gb|EFW30636.1| putative geranyltranstransferase [Selenomonas artemidis F0399]
Length = 295
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 152/299 (50%), Gaps = 20/299 (6%)
Query: 41 DLKTYWTTLITEIDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
++K W + T +++ L+ + T +++ SM YS++A G KR P++ +AA + G
Sbjct: 4 EMKELWQSRRTLVERALQAELDRTDILDDKLRASMAYSLMAGG-KRLRPILLMAAADAVG 62
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
V+ ACALEM+H SLIHDDLP MD+D RRG+ +NH VY AILAGDAL L
Sbjct: 63 VDGTKFITAACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYDEGTAILAGDALLTL 122
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----VQE 213
F I+ VP R+LRV+ E RA G+ GM GQ LDLE E + V
Sbjct: 123 AFTVILRQQD---VPAERLLRVVDETGRAAGAEGMVGGQMLDLEAENRRISMEELRRVHM 179
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRD 268
K G + + CG LAGA + ++ +L Y G+ +Q+ DDIL+ P
Sbjct: 180 GKTGALFRAALRCGAILAGASERQLAALTAYADHFGLAFQITDDILDVIGTAEDIGKPVG 239
Query: 269 EEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
++K K +YV +++A +A R + D +GD L + Y R+
Sbjct: 240 SDEKNHK-STYVTLTSLDEAQSLA---RQTVESAADALHIFGDEAAFLRELVLYLVRRK 294
>gi|404496792|ref|YP_006720898.1| trans-isoprenyl diphosphate synthase [Geobacter metallireducens
GS-15]
gi|418065257|ref|ZP_12702631.1| Polyprenyl synthetase [Geobacter metallireducens RCH3]
gi|78194397|gb|ABB32164.1| trans-isoprenyl diphosphate synthase [Geobacter metallireducens
GS-15]
gi|373562435|gb|EHP88646.1| Polyprenyl synthetase [Geobacter metallireducens RCH3]
Length = 297
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 160/300 (53%), Gaps = 16/300 (5%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVK--YPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
DLK Y +D+ LE+++ + P ++ +MRYSV A G KR PV+ +AACE
Sbjct: 1 MDLKNYLKERCAIVDEALERSLPGEGDLPVSVHRAMRYSVFA-GGKRIRPVLMLAACEAV 59
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G A P ACA+EM+H SLIHDDLP MDDD RRG+P+NH V+G IAILAGDAL
Sbjct: 60 GGTPDLALPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDALLT 119
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN------LVEFV 211
F + S R+L VI EI GS GM GQ +D+E E V+++
Sbjct: 120 EAFILMSSPEYAAKAGHARILPVIHEIGICAGSRGMVGGQVVDMESEGKKDIDLATVQYI 179
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA---QTPRD 268
K G + + S G L GA+ D + ++ RYG A+G+ +Q+ DDIL+ + Q +D
Sbjct: 180 HTHKTGALMKASVKAGAILGGAEGDALAAMTRYGEAIGLAFQIADDILDIEGTTEQIGKD 239
Query: 269 EEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+ +GK +Y A G+ + A+EL A E L F G+ PL Y R+
Sbjct: 240 AGSDEARGKATYPAVMGLADSKRRAQELVDLALEALSPF---GEKAEPLREIARYIVSRK 296
>gi|294101849|ref|YP_003553707.1| geranyltranstransferase [Aminobacterium colombiense DSM 12261]
gi|293616829|gb|ADE56983.1| Geranyltranstransferase [Aminobacterium colombiense DSM 12261]
Length = 300
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/250 (38%), Positives = 142/250 (56%), Gaps = 16/250 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P +++ESM YS+ A G KR P++CV A E G + P A ALEMVH ASLIHDDLP
Sbjct: 33 PPRLWESMTYSLQAGG-KRLRPILCVKAAESVGGEKEKVLPMALALEMVHTASLIHDDLP 91
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
MD+D RRG+P+NH +YG +AILAGDAL F++ + VP +++ ++ A
Sbjct: 92 AMDNDSLRRGKPTNHMIYGDALAILAGDALLAWAFEYSLKGLMDRGVPPSSIVQALSIFA 151
Query: 186 RAVGSTGMAAGQFLDLE-----GEPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+AVG +G+ GQ LD + + V + +K + + S V G L GA + +
Sbjct: 152 QAVGPSGICGGQVLDTDPASFTSSLSFVANIALQKTAVLLQASLVTGAILGGASQEIAGA 211
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAE 293
+YGR +G+ +Q+VDDIL+ T EE K GK ++V +G+E+A ++A
Sbjct: 212 FGKYGRHLGLAFQIVDDILDV---TSSPEELGKTPGKDAAQQKITFVTQFGLEEARKMAL 268
Query: 294 ELRAKAKEEL 303
+ +A E L
Sbjct: 269 KESKEAAESL 278
>gi|319943220|ref|ZP_08017503.1| geranyltranstransferase [Lautropia mirabilis ATCC 51599]
gi|319743762|gb|EFV96166.1| geranyltranstransferase [Lautropia mirabilis ATCC 51599]
Length = 322
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 156/272 (57%), Gaps = 23/272 (8%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P++++E+MRY+VL G KR P++ AA EL G + ACA+E++H SL+HDD+P
Sbjct: 52 PDRLHEAMRYAVLGGG-KRVRPLLVYAAGELVGADARVLDGAACAVELIHVYSLVHDDMP 110
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRV----- 180
MD+D RRG+P+ H YG +A+L GDAL L F+ +V+ P + +P+ RV
Sbjct: 111 AMDNDDMRRGKPTVHRQYGEAMAMLVGDALQALAFEVLVA---PLVEADPQAARVPAATM 167
Query: 181 IAEIARAVGSTGMAAGQFLDLEG------EPNLVEFVQEKKFGEMSECSAVCGGFLAGA- 233
+A +ARA GS GMA GQ LD+EG P L E + K G M S V G LAG
Sbjct: 168 VAVLARAAGSWGMAGGQALDIEGVGLRLSRPQL-EAMHRAKTGAMLSVS-VELGLLAGGQ 225
Query: 234 -DDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP---RDEEKKKKKGK-SYVAFYGVEKA 288
D ++++RYGRA+G+ +QVVDDIL+ A + + K + + K +YV+ G+E A
Sbjct: 226 PSADLAEAMQRYGRAIGLAFQVVDDILDVTADSATLGKTAGKDQAQDKPTYVSLLGLEGA 285
Query: 289 MEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+A +L A+A L D + L FI
Sbjct: 286 RALATDLHAQAHACLQALGPRADRLRMLADFI 317
>gi|260881089|ref|ZP_05403580.2| geranyltranstransferase [Mitsuokella multacida DSM 20544]
gi|260849479|gb|EEX69486.1| geranyltranstransferase [Mitsuokella multacida DSM 20544]
Length = 298
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/300 (35%), Positives = 155/300 (51%), Gaps = 21/300 (7%)
Query: 35 LRSTQFDLKTYWTTLITEIDQNLEKAITVKYP--EQIYESMRYSVLAKGTKRAPPVMCVA 92
+R LK W +++ L K + + P ++ ESMRYS++A G KR P++ +A
Sbjct: 1 MRGLNTMLKEIWKERQQLVEKQLVKELEKEPPLDARLAESMRYSLMAGG-KRLRPILLMA 59
Query: 93 ACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAG 152
A + G TACALEM+H SLIHDDLP MD+D RRG+ +NH V+G +A+LAG
Sbjct: 60 AADAVGAKGTDYLTTACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGDGMAVLAG 119
Query: 153 DALFPLGFQHI--VSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF 210
DAL L F+ I HT P +LR + EI+ A G GM GQ +DLE E + +
Sbjct: 120 DALLTLAFEVIGRQQHTDP-----ATLLRTVQEISTAAGMNGMVGGQAIDLESEGHRISM 174
Query: 211 VQEKKF-----GEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL-----E 260
Q +K G + + G LAGA + ++ +L Y G+ +Q+ DDIL E
Sbjct: 175 EQLRKMHMGKTGALFRAALRSGAILAGASEKQLAALTAYAEGFGLAFQITDDILDVTGDE 234
Query: 261 AKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
A P + + +K +YV +E+A +A+E A LD F D + L ++
Sbjct: 235 ALIGKPVGSDLRNEK-STYVTLTSLEEAQRLAKETVDAAVAALDGFGPEADFLRQLVRYM 293
>gi|302036073|ref|YP_003796395.1| geranyltranstransferase [Candidatus Nitrospira defluvii]
gi|300604137|emb|CBK40469.1| Geranyltranstransferase [Candidatus Nitrospira defluvii]
Length = 326
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/273 (35%), Positives = 148/273 (54%), Gaps = 23/273 (8%)
Query: 69 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMD 128
++ESMRYS++A G KR P++ +AA E G AC+LE +H SLIHDDLP MD
Sbjct: 62 LHESMRYSLMAGG-KRVRPILTIAAAEAIGATPPGLMAVACSLEFIHTYSLIHDDLPSMD 120
Query: 129 DDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVP--EP-RVLRVIAEIA 185
+D RRG+P+NH VYG +AILAGDAL + F I + P L+ EP R +R++ E+A
Sbjct: 121 NDDFRRGKPTNHKVYGEAMAILAGDALLTMAFDLI---SRPELMKGCEPTRQVRILQELA 177
Query: 186 RAVGSTGMAAGQFLDLEGEPNLVEF-----VQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
G+ GM GQ D++ E ++ + + K G + + G AGA D ++
Sbjct: 178 YGSGNMGMVGGQVFDIQAENQDIDLPTLQNIHKHKTGMLIRAAVRMGAMAAGATDRQLDD 237
Query: 241 LRRYGRAVGVLYQVVDDIL------EAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEE 294
+ Y +G+ +Q+ DD+L E + P + ++ K K+Y FYGVE A ++A++
Sbjct: 238 MTGYAEDIGLAFQIADDVLNVTGTREELGKNPNTDAERGK--KTYPTFYGVEGARKLADD 295
Query: 295 LRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+A + R +G + PL Y R+
Sbjct: 296 CVTRA---IGRLNTFGPSADPLREIARYITARK 325
>gi|410478476|ref|YP_006766113.1| geranylgeranyl pyrophosphate synthase [Leptospirillum ferriphilum
ML-04]
gi|424866252|ref|ZP_18290093.1| Geranyltranstransferase [Leptospirillum sp. Group II 'C75']
gi|124515823|gb|EAY57332.1| Geranyltranstransferase [Leptospirillum rubarum]
gi|387223049|gb|EIJ77421.1| Geranyltranstransferase [Leptospirillum sp. Group II 'C75']
gi|406773728|gb|AFS53153.1| geranylgeranyl pyrophosphate synthase [Leptospirillum ferriphilum
ML-04]
Length = 303
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/268 (37%), Positives = 140/268 (52%), Gaps = 19/268 (7%)
Query: 71 ESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDD 130
ESMRYS+LA G KR PV+ +AA E G + I P LE++H SLIHDDLP MD+D
Sbjct: 41 ESMRYSLLA-GGKRIRPVLAMAAIEALGKDPIPYIPLLAPLELIHTYSLIHDDLPSMDND 99
Query: 131 PSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGS 190
RRG+P+NH +YG AILAGDAL F + LV L++I E++ G
Sbjct: 100 SLRRGKPTNHVIYGDATAILAGDALLTHAFTLLSDPDYDKLVSFEIRLKIIQELSVGAGV 159
Query: 191 TGMAAGQFLDLEGEP---NL--VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYG 245
GM GQ +D+ E NL +EF+ + K G + S G L A + + L RYG
Sbjct: 160 NGMVGGQQMDIASEGKALNLSSLEFLHQHKTGALIRASLRIGALLGKASSPDFEHLDRYG 219
Query: 246 RAVGVLYQVVDDILEAKAQTP-------RDEEKKKKKGKSYVAFYGVEKAMEVAEELRAK 298
+AVG+ +Q+ DD+L+ + +D+++ K +Y GVEKA +A R K
Sbjct: 220 QAVGIAFQIADDLLDVEGDAALLGKAAQKDQDRHK---NTYPGLMGVEKARNMA---RHK 273
Query: 299 AKEELDRFKKYGDNVLPLYSFIDYAADR 326
E LD +G+ L Y +R
Sbjct: 274 LNEALDAISSFGEKAKHLRELASYIIER 301
>gi|326494730|dbj|BAJ94484.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 358
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 128/310 (41%), Positives = 182/310 (58%), Gaps = 26/310 (8%)
Query: 38 TQFDLKTYWTTLITEIDQNLEKAITV-KYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
T+FD K Y ++ L+ A+ + P ++E+MRY++LA G KR P +C+AAC +
Sbjct: 54 TEFDFKAYMGERAVAVNGALDAAVPAGEPPATLHEAMRYALLA-GGKRVRPALCLAACVV 112
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
G A A A+EMVH SL+HDDLPCMDDD RRG+P+ H ++G IA+LAGDAL
Sbjct: 113 SGGREAWAMAPAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVMFGEPIAVLAGDALL 172
Query: 157 PLGFQHIVS--HTPPHLVP---EPRVLRVIAEIARAVGSTGMAAGQFLDLE----GEP-- 205
L FQH+ S PP + P RV+R I E+AR +GS G+ AGQ +DLE EP
Sbjct: 173 ALAFQHMASVDSYPPDVDPAKHTARVVRAIGELARCIGSEGLVAGQVVDLEMTGSTEPVP 232
Query: 206 -NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQ 264
+ +E++ K + E S V G + G +++I+ LR+Y R++G+L+QVVDDIL+
Sbjct: 233 LDRLEYIHLHKTAALLEASVVIGAIIGGGSEEQIERLRKYARSIGLLFQVVDDILDV--- 289
Query: 265 TPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLY 317
T EE K GK +Y G+EK+ E AE+L + AKE+L F+K + PL
Sbjct: 290 TKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDAKEQLAYFEK--EKAAPLL 347
Query: 318 SFIDYAADRE 327
+Y A R+
Sbjct: 348 YLANYIAYRQ 357
>gi|222055717|ref|YP_002538079.1| polyprenyl synthetase [Geobacter daltonii FRC-32]
gi|221565006|gb|ACM20978.1| Polyprenyl synthetase [Geobacter daltonii FRC-32]
Length = 297
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/293 (38%), Positives = 161/293 (54%), Gaps = 13/293 (4%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITV--KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
DLK+Y +D L + + + P +++SMRYS+ A G KR P++ +AACE
Sbjct: 1 MDLKSYLKERCQLVDDALNRFLPLADDLPASLHKSMRYSIFAGG-KRIRPILMLAACEAV 59
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G N A P ACA+EM+H SLIHDDLP MDDD RRG P+NH V+G +AILAGDAL
Sbjct: 60 GGNISQAMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKVFGEAVAILAGDALLT 119
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN------LVEFV 211
F + + VP +++VI EI+ GS GM GQ +D+E E N V+++
Sbjct: 120 EAFILLSNLAAAPTVPPAALVQVIQEISCCAGSRGMVGGQVVDMESEGNAEIDLATVQYI 179
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP---RD 268
K G + + S G L GA + +SL RYG A+G+ +Q+ DDIL+ + T +D
Sbjct: 180 HTHKTGALIKASVKSGALLGGASSKDAESLTRYGEAIGLAFQIADDILDIEGTTEEIGKD 239
Query: 269 EEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+ +GK +Y A G+ +A A EL A + L F D + + S+I
Sbjct: 240 AGSDEARGKATYPAVMGLAEAKIRAAELVDIALDALSAFDGKADPLREIASYI 292
>gi|315646331|ref|ZP_07899451.1| Polyprenyl synthetase [Paenibacillus vortex V453]
gi|315278530|gb|EFU41846.1| Polyprenyl synthetase [Paenibacillus vortex V453]
Length = 301
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/271 (39%), Positives = 156/271 (57%), Gaps = 14/271 (5%)
Query: 42 LKTYWTTLITEIDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
+ Y + +D L + K PE +++SM YS++A G KR P++ +AACE G
Sbjct: 7 INQYMNEICDRLDSELTNLFPPSWKVPETLHKSMSYSLMAGG-KRMRPLLVIAACEAGGG 65
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+R AA P ACA+EMVH SL+HDDLP MDDD RRG+P+NH V+G AILAGDAL
Sbjct: 66 SRDAAIPVACAVEMVHTYSLVHDDLPAMDDDDYRRGKPTNHKVFGEASAILAGDALLTHA 125
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEK 214
F I+ + VP RVL ++ ++A G GM GQ D+EGE L +E++
Sbjct: 126 FYSIIQASRQFGVPAERVLSIVEDLAEYAGPRGMVGGQVADMEGEQGLTTLEQLEYIHLH 185
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL-----EAKAQTPRDE 269
K ++ S + GG +AG + +I+SLR +G +G+ +Q+ DDIL E+K P
Sbjct: 186 KTSDLIMFSLMAGGHIAGCTEAQIESLRIFGHHIGLAFQIQDDILDLVGDESKLGKPVQS 245
Query: 270 EKKKKKGKSYVAFYGVEKAMEVAEELRAKAK 300
+ K++K +Y F G++ + E L A+AK
Sbjct: 246 DVKQEK-VTYPYFIGLDPSRREVERLTAEAK 275
>gi|94970459|ref|YP_592507.1| farnesyl-diphosphate synthase [Candidatus Koribacter versatilis
Ellin345]
gi|94552509|gb|ABF42433.1| farnesyl-diphosphate synthase [Candidatus Koribacter versatilis
Ellin345]
Length = 315
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 157/288 (54%), Gaps = 34/288 (11%)
Query: 54 DQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF------GVNRIAAF 105
D LE+ + + P I+++MR+SV A G KR P++ + A + GV+ + A
Sbjct: 36 DAALERLLPPGTQRPPSIHQAMRHSVFAGG-KRLRPILVMEAARMITGSLPDGVDELGA- 93
Query: 106 PTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVS 165
ALEM+H SLIHDDLP +D+D RRG+P+ H +G AILAGDAL ++ +
Sbjct: 94 ----ALEMLHTYSLIHDDLPALDNDDLRRGRPTCHVAFGEATAILAGDALQTYAYEVMAR 149
Query: 166 HTPPHLVPEPRVLRVIAEIARAVGST-GMAAGQFLDLEGEPN-----LVEFVQEKKFGEM 219
E RV ++I E+A A G+ GM GQ LDLE E VE++ K G +
Sbjct: 150 ---LRTTAEARV-QIIEEVAHATGTIDGMIGGQVLDLEAEHTHADAATVEYIHRSKTGAL 205
Query: 220 SECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-- 277
S V GG AGAD ++Q +R +G++ G+ +Q+VDD+L+ T E+ K GK
Sbjct: 206 ITASVVAGGLYAGADKAQVQRIREFGKSAGLAFQIVDDVLDV---TQTSEQLGKTAGKDT 262
Query: 278 -----SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
++ + YGV+K++E+A+EL A + LD F + + L F+
Sbjct: 263 KSEKSTWPSLYGVDKSLEMADELVYTANKRLDSFGERATTLKELAKFL 310
>gi|402833960|ref|ZP_10882567.1| geranyltranstransferase [Selenomonas sp. CM52]
gi|402279029|gb|EJU28072.1| geranyltranstransferase [Selenomonas sp. CM52]
Length = 295
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/280 (36%), Positives = 155/280 (55%), Gaps = 17/280 (6%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITV--KYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
+ K W +++ L + + Y E + ++M YS++A G KR PV+ +AA +
Sbjct: 2 HVNFKAEWKKRADLVEEGLLRELKKVPAYDETLEKAMEYSLMA-GGKRLRPVLLMAAADA 60
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
G + A T CA+EM+H SLIHDDLP MD+D RRG+P+NH V+G IA+LAGDAL
Sbjct: 61 VGKDGAAFLTTGCAIEMIHTYSLIHDDLPAMDNDDYRRGKPTNHKVFGDGIAVLAGDALL 120
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEKK- 215
L F+ ++ PE V V++E++RA G GM GQ LDLEGE ++ +K
Sbjct: 121 TLAFEVMLRQEGA--APETLV-TVVSEMSRAAGPYGMVGGQVLDLEGEGRRLDLAALRKI 177
Query: 216 -FGEMSE--CSAV-CGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL-----EAKAQTP 266
G+ C+A+ G LAGA ++E+ +L Y G+ +Q+ DDIL EA P
Sbjct: 178 HMGKTGALFCAAIRSGAILAGAKEEELAALTLYAERFGLAFQITDDILDVTGDEAAIGKP 237
Query: 267 RDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRF 306
+ + +K +YV +E+A ++AE+ +A LD F
Sbjct: 238 VGSDVRNEKA-TYVTLTSLEEAKKLAEDAVNEAVAALDIF 276
>gi|118580818|ref|YP_902068.1| polyprenyl synthetase [Pelobacter propionicus DSM 2379]
gi|118503528|gb|ABL00011.1| farnesyl-diphosphate synthase [Pelobacter propionicus DSM 2379]
Length = 297
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 110/300 (36%), Positives = 161/300 (53%), Gaps = 16/300 (5%)
Query: 40 FDLKTYWTTLITEIDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
DLK Y +D L+ + + P ++++MRYSV A G KR P++ +AAC+
Sbjct: 1 MDLKAYLKEQCARVDAALDSYLPRETELPHSLHKAMRYSVFAGG-KRVRPILMLAACQAV 59
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G + A P ACA+EM+H SLIHDDLP MDDD RRG P+NH V+G +AILAGDAL
Sbjct: 60 GGDTEVAIPAACAMEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKVFGEAVAILAGDALLT 119
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN------LVEFV 211
F+ + + VP L VI +IA GS GM GQ +D+E E V+++
Sbjct: 120 EAFKLLSNPACAAGVPSEARLAVIHQIASCAGSHGMVGGQVVDMESEGKSDIDLPTVQYI 179
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP---RD 268
K G + + + V G L GAD +++ ++ RYG A G+ +Q+ DDIL+ + T +D
Sbjct: 180 HTHKTGALIKAAVVAGALLGGADREKLAAITRYGSAAGLAFQIADDILDIEGTTEEIGKD 239
Query: 269 EEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+ +GK +Y A G+ A + A + +A + L+ F D PL Y R+
Sbjct: 240 AGSDQARGKATYPAVMGLAAAKQEATTMMDEAFKALEIFGSEAD---PLREIARYIVTRK 296
>gi|403380864|ref|ZP_10922921.1| polyprenyl synthetase [Paenibacillus sp. JC66]
Length = 301
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 101/279 (36%), Positives = 160/279 (57%), Gaps = 26/279 (9%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P+ + E+M YS+ A G KR P++ +AA E G NR AA P ACA+EMVH SLIHDDLP
Sbjct: 33 PQPLKEAMAYSLHA-GGKRLRPILVLAAAESLGGNREAALPIACAVEMVHTYSLIHDDLP 91
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHT--PPHLVPEPRVLRVIAE 183
+D+D RRG P+NH V+G +AILAGDAL F ++ S + PE + L +I +
Sbjct: 92 ALDNDDFRRGMPTNHKVHGEAMAILAGDALLTHAF-YVASDACLRSGIAPE-QGLALIRD 149
Query: 184 IARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCGGFLAGADDDEI 238
A G+ GM GQ D+ GE + ++++ K G++ S GG LA A+++++
Sbjct: 150 FAEFAGARGMVGGQVADMVGEQGITRLEELQYIHTHKTGDLIVFSVKAGGRLANANEEQM 209
Query: 239 QSLRRYGRAVGVLYQVVDDIL-----EAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAE 293
++L ++GR++G+ +Q++DDIL E K P ++K++K +Y F G+E++ ++
Sbjct: 210 KALEKFGRSIGMAFQILDDILDITGDEQKLGKPVKSDEKQQK-VTYPYFIGLEESKKLVR 268
Query: 294 ELRAKAKEELDRFKKYGDNVLP----LYSFIDYAADREF 328
E K+ +++ P L DY DR++
Sbjct: 269 EHTEAGKQAINQAH------FPFPQRLLELADYMMDRDY 301
>gi|30249147|ref|NP_841217.1| polyprenyl synthetase [Nitrosomonas europaea ATCC 19718]
gi|30180466|emb|CAD85071.1| Polyprenyl synthetase [Nitrosomonas europaea ATCC 19718]
Length = 297
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/307 (34%), Positives = 167/307 (54%), Gaps = 32/307 (10%)
Query: 41 DLKTYWTTLITEIDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
D +++ + + ++ LEK + T P +++++MRYSVL G KR P++ AA EL G
Sbjct: 4 DFQSWASEQLALVETCLEKHLPETNCAPARLHDAMRYSVLGGG-KRVRPLLSFAAGELSG 62
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
++ A A+E++H SL+HDDLPCMD+D RRG+P+ H Y A+L GD+L L
Sbjct: 63 ADKTHATIAGAAVELIHVYSLVHDDLPCMDNDTLRRGKPTCHVRYDEPTALLVGDSLQSL 122
Query: 159 GFQHIVSHTPPHLVPEPRV-LRVIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQ 212
FQ + T +L +P V L ++ +A A GS GMA GQ +DL+ +EF+
Sbjct: 123 AFQLL---TETNLTEDPHVQLEMVRHLAFAAGSRGMAGGQAIDLDSVGKTLSLPELEFMH 179
Query: 213 EKKFGEMSECSAV----CGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP-- 266
K G + + + CG L D+ + + L + + +G+ +QV+DDIL+ +A T
Sbjct: 180 IHKTGALIRAAVILGARCGNRL---DETQFKLLDHFAKCMGLAFQVIDDILDTEATTAAL 236
Query: 267 -----RDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFID 321
+D E K +YV+ G+++A E+A ELR +A L++F G L L D
Sbjct: 237 GKTAGKDAENNK---PTYVSILGIKQARELAHELRQEATGVLNQF---GSEALRLQQVTD 290
Query: 322 YAADREF 328
+ REF
Sbjct: 291 FIVQREF 297
>gi|344995715|ref|YP_004798058.1| polyprenyl synthetase [Caldicellulosiruptor lactoaceticus 6A]
gi|343963934|gb|AEM73081.1| Polyprenyl synthetase [Caldicellulosiruptor lactoaceticus 6A]
Length = 299
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 164/300 (54%), Gaps = 21/300 (7%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNR 101
L+ Y +++++LEK + + PE IY++MRYSV A G KR P++C+ + ++ ++
Sbjct: 6 LEEYINLSQKKVEEHLEKILAERSPEIIYQAMRYSVFA-GGKRLRPLLCLLSYQMLSKDQ 64
Query: 102 IA---AFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
A A+E++H SLIHDDLP MD+D RRG+P+NH V+G IAILAGDAL L
Sbjct: 65 EVDQKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAGDALLNL 124
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFL-------DLEGEPNLVEFV 211
+ + E +++ + + G GM GQ + D++ E L E +
Sbjct: 125 AAE-VCMDWILRCGCEKNLVKAAKYLFWSSGVEGMIGGQVIDITNSGQDIKSEELLFE-M 182
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
KK + + S VCG +AGA++D + + +G+ +G+ +Q+ DDIL+ + + +
Sbjct: 183 HLKKTSRLIQASCVCGALVAGAENDVVSDMEEFGKNLGLAFQIRDDILDVIGDSKKVGKS 242
Query: 272 ----KKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
K+K ++V FYG+EKA ++ E KA +D +KY DN L +Y +RE
Sbjct: 243 IGKDIKEKKNTFVTFYGLEKAQQLVEHYSQKA---IDVIQKY-DNSELLIELTNYLINRE 298
>gi|406911096|gb|EKD50966.1| Polyprenyl synthetase [uncultured bacterium]
Length = 297
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 156/299 (52%), Gaps = 18/299 (6%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKY---PEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
FDLK Y+T T ID L+ + P+++ ++M YS+ A G KR PV+ A+ +
Sbjct: 3 FDLKDYFTQKKTVIDTALKAHWINDHHIRPKELLDAMEYSLFAPG-KRIRPVLVFASTQT 61
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
+ P A ALEM+HA SLIHDDLP MD+D RRG+P+NH V+G +AILAGDAL
Sbjct: 62 LNMPEEDVIPLAGALEMIHAFSLIHDDLPSMDNDDLRRGRPTNHKVFGEALAILAGDALL 121
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----V 211
F ++S P ++ VI A+A G+ GM +GQ D++ E ++ +
Sbjct: 122 SHAFT-VLSDLDTEKYPHENIIDVIHHFAKATGTCGMISGQVWDMQSENRIISLDELQNL 180
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQ----TPR 267
K G + + L GA+ D + L RY A+G+ +QVVDDIL+ + P
Sbjct: 181 HRHKTGALITLAVTSPAVLKGAEPDVMDCLIRYSEAIGLCFQVVDDILDIEGDESLGKPI 240
Query: 268 DEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
++ K K +Y A G++ A + A+ L A L F + D PL + + A+R
Sbjct: 241 GSDQAKNKS-TYPALLGLDGAKKEAKRLLEVALASLTSFDERAD---PLRAIARFIAER 295
>gi|260887337|ref|ZP_05898600.1| geranyltranstransferase [Selenomonas sputigena ATCC 35185]
gi|330838910|ref|YP_004413490.1| Polyprenyl synthetase [Selenomonas sputigena ATCC 35185]
gi|260862973|gb|EEX77473.1| geranyltranstransferase [Selenomonas sputigena ATCC 35185]
gi|329746674|gb|AEC00031.1| Polyprenyl synthetase [Selenomonas sputigena ATCC 35185]
Length = 295
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 103/280 (36%), Positives = 155/280 (55%), Gaps = 17/280 (6%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITV--KYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
+ K W +++ L + + Y E + ++M YS++A G KR PV+ +AA +
Sbjct: 2 HVNFKAEWKKRADLVEEGLLRELKKVPAYDETLEKAMEYSLMA-GGKRLRPVLLMAAADA 60
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
G + A T CA+EM+H SLIHDDLP MD+D RRG+P+NH V+G IA+LAGDAL
Sbjct: 61 VGKDGAAFLTTGCAIEMIHTYSLIHDDLPAMDNDDYRRGKPTNHKVFGDGIAVLAGDALL 120
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEKK- 215
L F+ ++ PE V V++E++RA G GM GQ LDLEGE ++ +K
Sbjct: 121 TLAFEVMLRQEGA--APETLV-TVVSEMSRAAGPYGMVGGQVLDLEGEGRRLDLAALRKI 177
Query: 216 -FGEMSE--CSAV-CGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL-----EAKAQTP 266
G+ C+A+ G LAGA ++E+ +L Y G+ +Q+ DDIL EA P
Sbjct: 178 HMGKTGALFCAAIRSGAILAGAKEEELAALTLYAERFGLAFQITDDILDVTGDEAAIGKP 237
Query: 267 RDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRF 306
+ + +K +YV +E+A ++AE+ +A LD F
Sbjct: 238 VGSDVRNEKA-TYVTLTSLEEAKKLAEDAVDEAVVALDIF 276
>gi|82701369|ref|YP_410935.1| polyprenyl synthetase [Nitrosospira multiformis ATCC 25196]
gi|82409434|gb|ABB73543.1| farnesyl-diphosphate synthase [Nitrosospira multiformis ATCC 25196]
Length = 297
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 110/308 (35%), Positives = 166/308 (53%), Gaps = 35/308 (11%)
Query: 36 RSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
RS Q ++ TL+ D PE+++E+MRY+VL G KR P++ AA E
Sbjct: 10 RSHQVRIENSLQTLLPAADVA---------PERLHEAMRYTVLGGG-KRVRPLLAFAAGE 59
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
L N A A+E++H SL+HDDLPCMDDD RRG+P+ H YG IA+L GD+L
Sbjct: 60 LNKANEERVTIAAIAVELIHVYSLVHDDLPCMDDDVLRRGKPTCHIEYGEAIALLTGDSL 119
Query: 156 FPLGFQHIVSHTPPHLVPEPRV-LRVIAEIARAVGSTGMAAGQFLDLEGE------PNLV 208
L FQ + ++ L P++ L +I +A+A GS GMA GQ +DL P L
Sbjct: 120 QSLAFQLLAEYS---LADTPKMQLEMIRRLAQAAGSRGMAGGQAVDLASVGRTLSLPEL- 175
Query: 209 EFVQEKKFGEMSECSAVCGGFLAG-ADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP- 266
EF+ K G + + + G + D+ ++ +L + + +G+ +QVVDD+L+A+A T
Sbjct: 176 EFMHIHKTGALIRAAVMLGAYCGSRLDEAQLAALDHFAKCIGLAFQVVDDVLDAEATTAA 235
Query: 267 ------RDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+D E K +YV+ G ++A E+AEELR +A L+ F+ + + FI
Sbjct: 236 LGKTAGKDAENNK---PTYVSILGSKRARELAEELRREAYASLEMFEAAAGRLRQVTDFI 292
Query: 321 DYAADREF 328
+ REF
Sbjct: 293 IH---REF 297
>gi|258515780|ref|YP_003192002.1| polyprenyl synthetase [Desulfotomaculum acetoxidans DSM 771]
gi|257779485|gb|ACV63379.1| Polyprenyl synthetase [Desulfotomaculum acetoxidans DSM 771]
Length = 296
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 156/272 (57%), Gaps = 15/272 (5%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
PE I+ +MRYS+ A G KR P M +AA E G + P ACALE++H SLIHDDLP
Sbjct: 29 PEIIHRAMRYSIFAGG-KRLRPAMLIAAAEAVGGSADKVMPAACALELIHTYSLIHDDLP 87
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
MDDD RRG+P+NH V+G +AILAGDAL + FQ + + + + V+RVIA+I+
Sbjct: 88 SMDDDDYRRGKPTNHKVFGEAMAILAGDALLTMSFQLLAGLSGRNGIAPADVVRVIADIS 147
Query: 186 RAVGSTGMAAGQFLDL-----EGEPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
A G+TG+ GQ +D+ E + +E++ KK G + + G L+GADD+E++S
Sbjct: 148 AAAGTTGLIGGQVVDIVSANQEIDAGTLEYIHTKKTGALFRAAIRSGAVLSGADDEELKS 207
Query: 241 LRRYGRAVGVLYQVVDDILEA-----KAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEEL 295
L Y G+ +Q+ DDIL+ K P ++K K +Y A YG+E+A +A
Sbjct: 208 LTNYAEHFGLAFQITDDILDVAGDMQKTGKPVGSDEKNNKA-TYPALYGLEEAYRLAGY- 265
Query: 296 RAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
A++ L + +G+ L + + +R+
Sbjct: 266 --SAEQALYALEPFGEKANFLKELVKFVVNRD 295
>gi|325290005|ref|YP_004266186.1| farnesyl-diphosphate synthase [Syntrophobotulus glycolicus DSM
8271]
gi|324965406|gb|ADY56185.1| farnesyl-diphosphate synthase [Syntrophobotulus glycolicus DSM
8271]
Length = 289
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 107/293 (36%), Positives = 156/293 (53%), Gaps = 22/293 (7%)
Query: 44 TYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIA 103
+Y+T LI + Q L K + + ESM Y+++A G KR PV+ +AA E+ G
Sbjct: 7 SYFTGLIEDFLQKL----PWKANDVLSESMAYTLMAGG-KRVRPVLALAAAEIVGGAPEV 61
Query: 104 AFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHI 163
P AC LEM+H SLIHDDLP +D+D RRG+P+NH V+G A+LAGD L GFQ +
Sbjct: 62 VIPCACGLEMIHTYSLIHDDLPALDNDDYRRGRPTNHKVFGEATALLAGDGLLTYGFQLL 121
Query: 164 VSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGE 218
S P VP R ++VI E A AVG GM GQ LD GE + + + K G
Sbjct: 122 ASDVP---VPLERQIKVIRETAEAVGWQGMVRGQVLDTLGEKGELSVSQITNIHHLKTGA 178
Query: 219 MSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQ-----TPRDEEKKK 273
+ S G L G ++EI+ L Y A+G+ +Q+ DDIL+ + P + K
Sbjct: 179 LLTASVRLGAILGGGLEEEIRQLSIYAAALGLAFQIKDDILDIEGTEDALGKPVGSDLKL 238
Query: 274 KKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
+K +Y + G++ A ++ +AK L++F++ + +L F DY R
Sbjct: 239 QK-STYPSILGMDGAKIQLKQKIIEAKTALEKFEEKAEFLL---CFADYIETR 287
>gi|308069598|ref|YP_003871203.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus polymyxa
E681]
gi|305858877|gb|ADM70665.1| Geranylgeranyl pyrophosphate synthetase (GGPP synthetase)
[Paenibacillus polymyxa E681]
Length = 307
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 103/249 (41%), Positives = 146/249 (58%), Gaps = 18/249 (7%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + ESM YS+ A G KR P++ +AA E FG +R AA P ACA+EMVH SLIHDDLP
Sbjct: 39 PAVLRESMNYSLTAGG-KRLRPLLVIAAAEAFGGSREAALPVACAVEMVHTYSLIHDDLP 97
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
MDDD RRG+ +NH VYG +A+LAGDAL F IV H V +L ++ +++
Sbjct: 98 AMDDDDYRRGKLTNHKVYGEAVAVLAGDALLTHAFYSIVQAGRRHGVSSDALLSIVEDLS 157
Query: 186 RAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
G+ GM GQ D+ GE + +EF+ K ++ S + GG + GAD ++++
Sbjct: 158 EMSGARGMVGGQVADMSGEQGMTGIEELEFIHLHKTADLIIFSLLAGGRIGGADKSQLEA 217
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKS--------YVAFYGVEKAMEVA 292
LRR+GR +G+ +Q+ DDIL+ DE K KK +S Y F G++ +++
Sbjct: 218 LRRFGRDLGLAFQIQDDILDLIG----DESKMGKKTQSDVEQEKVTYPYFIGMDASLQQV 273
Query: 293 EELRAKAKE 301
EEL A AK+
Sbjct: 274 EELTASAKK 282
>gi|85859630|ref|YP_461832.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl
pyrophosphate synthetase [Syntrophus aciditrophicus SB]
gi|85722721|gb|ABC77664.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl
pyrophosphate synthetase [Syntrophus aciditrophicus SB]
Length = 308
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/306 (35%), Positives = 164/306 (53%), Gaps = 21/306 (6%)
Query: 38 TQFDLKTYWTTLITEIDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
+ DL Y ID+ +++ + + P +++++MRYS+ A G KR P++C+AA E
Sbjct: 9 SGLDLNAYIKEKKLRIDEAIDRYLPGEEESPGELFKAMRYSLFAGG-KRIRPILCLAAAE 67
Query: 96 LFG--VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGD 153
G V+ P ACALE +H SLIHDDLP MD+D RRG+P++H V+G +AILAGD
Sbjct: 68 AVGTSVSSDCLLPVACALEYIHTYSLIHDDLPAMDNDDYRRGKPTSHKVFGDALAILAGD 127
Query: 154 ALFPLGFQHIVSHTPPH--LVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEP---N 206
AL F+ +++ T H L PE +LRVI EIA A G+ GM GQ DL EG+P +
Sbjct: 128 ALLTEAFE-LMTRTDFHTGLAPEI-LLRVIREIAAAAGAFGMVGGQVEDLRAEGKPGNLD 185
Query: 207 LVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP 266
+ + +K G M S G L+G + + +L YG +G+++Q+ DDIL +
Sbjct: 186 TLNRIHNRKTGAMIVVSLRAGAILSGGSEQAVSALTDYGHKIGLVFQIADDILNVEGDRT 245
Query: 267 ---RDEEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
+ +GK ++ G+E + + A L +A +LD F + PL Y
Sbjct: 246 VLGKSTGSDASRGKMTFPLLMGLEPSRQKAFALVEEALRDLDGFD---NRATPLRLMARY 302
Query: 323 AADREF 328
+R
Sbjct: 303 FVERRL 308
>gi|312134820|ref|YP_004002158.1| polyprenyl synthetase [Caldicellulosiruptor owensensis OL]
gi|311774871|gb|ADQ04358.1| Polyprenyl synthetase [Caldicellulosiruptor owensensis OL]
Length = 299
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 166/301 (55%), Gaps = 23/301 (7%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNR 101
L+ Y +++++L+ + + PE IY++MRYSV A G KR P++C+ + ++F ++
Sbjct: 6 LEEYINLSQKKVEKHLDGILKERSPEIIYQAMRYSVFA-GGKRLRPLLCLLSYQMFSEDK 64
Query: 102 ---IAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
A A+E++H SLIHDDLP MD+D RRG+P+NH ++G IAILAGDAL L
Sbjct: 65 EIDQKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVMFGEAIAILAGDALLNL 124
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFL-------DLEGEPNLVEFV 211
+ + + E +++ + A G GM GQ + D++ E L E +
Sbjct: 125 AAEVCMDWILRYGCRE-NLIKAAKYLFWASGVEGMIGGQVIDITNSGQDIKNEELLFE-M 182
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPR---- 267
KK + + S VCG +AGA+D + L YG+ +G+ +Q+ DD+L+ + +
Sbjct: 183 HLKKTSRLIQASCVCGALVAGAEDRVVFDLEEYGKNLGLAFQIRDDVLDVIGDSKKVGKS 242
Query: 268 -DEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
++ K+KK ++V FYG+EKA ++ E KA +D KKY DN L +Y +R
Sbjct: 243 IGKDIKEKKS-TFVTFYGLEKAQQLVEHYSQKA---IDVIKKY-DNSELLIELTNYLINR 297
Query: 327 E 327
E
Sbjct: 298 E 298
>gi|357419849|ref|YP_004932841.1| polyprenyl synthetase [Thermovirga lienii DSM 17291]
gi|355397315|gb|AER66744.1| Polyprenyl synthetase [Thermovirga lienii DSM 17291]
Length = 303
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 159/290 (54%), Gaps = 14/290 (4%)
Query: 48 TLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPT 107
T+ E N+ K P ++ESM YS++A G KR PV+ + E+FG+ P
Sbjct: 19 TVFEEHLGNISKKGLPNVPNTLWESMTYSLMAGG-KRIRPVLTMTVGEVFGLREEEVLPL 77
Query: 108 ACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGF-QHIVSH 166
A A+EM+H ASLIHDD+PCMD+D RRG+P+NH VYG +A+LAGDALF Q I +
Sbjct: 78 ATAVEMIHTASLIHDDMPCMDNDTLRRGKPTNHVVYGEAMALLAGDALFLYAIEQAIRNL 137
Query: 167 TPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEK----KFGEMSEC 222
T + + ++ + A G +G+ +GQ +D+ E N F K K + +
Sbjct: 138 TAIGNLDKSNIMEAAKTLLEAAGPSGICSGQAMDMH-EANNSFFSPWKIAYYKTATLIKA 196
Query: 223 SAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEA---KAQTPRDEEKKKKKGK-S 278
+ V LAGA D+I++L Y +GV +Q+VDDIL+ K ++ K + +GK +
Sbjct: 197 AVVSPAQLAGASSDDIKALTSYASHLGVAFQMVDDILDVIGEKNSLGKNPGKDEAQGKNT 256
Query: 279 YVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
++A YG+E+A+++A R +++ + K + L SF Y R +
Sbjct: 257 FIAVYGLEEAVKLA---RLHSQKSIGALSKIDKDTKYLASFAIYLESRTY 303
>gi|343469128|gb|AEM43805.1| geranylgeranyl diphosphate synthase [Castanea mollissima]
Length = 213
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/207 (41%), Positives = 125/207 (60%), Gaps = 18/207 (8%)
Query: 113 MVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLV 172
M+H SLIHDDLPCMD+D RRG+P+NH V+G D+A+LAGDAL F+HI T V
Sbjct: 1 MIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAVSTVG--V 58
Query: 173 PEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQEKKFGEMSECSAVC 226
P RV+ + E+AR++G+ G+ AGQ +D+ EG ++ +EF+ K + E + V
Sbjct: 59 PPARVIGAVGELARSIGTEGLVAGQVVDICSEGLSDVGLEHLEFIHLHKTAALLEAAVVL 118
Query: 227 GGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVA----- 281
G L G +E++ LR + R +G+L+QVVDDIL+ T +E K GK VA
Sbjct: 119 GAILGGGSHEEVEKLRNFARYIGLLFQVVDDILDV---TKSSQELGKTAGKDLVADKTTY 175
Query: 282 --FYGVEKAMEVAEELRAKAKEELDRF 306
G+EK+ E A++L A+++L F
Sbjct: 176 PKLMGIEKSKEFADKLNKDAQDQLSGF 202
>gi|125569734|gb|EAZ11249.1| hypothetical protein OsJ_01102 [Oryza sativa Japonica Group]
Length = 219
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 125/222 (56%), Gaps = 17/222 (7%)
Query: 118 SLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRV 177
SLIHDD+PCMDDD RRG+PSNH +G A+LAGDAL L F+H+ H VP R
Sbjct: 2 SLIHDDMPCMDDDALRRGRPSNHVAFGEFTALLAGDALHALAFEHVARGCGDHGVPADRT 61
Query: 178 LRVIAEIARAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAG 232
LR +AE+ A G+ G+AAGQ D E E ++E++ K + E +AV G + G
Sbjct: 62 LRAVAELGSASGTGGVAAGQVADKESEGLPVSLAMLEYIHVHKTARLLEAAAVSGAIVGG 121
Query: 233 ADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGV 285
D E++ +RRY R VG+L+QVVDD+L+ T E+ K GK +Y GV
Sbjct: 122 GADAEVERVRRYARCVGLLFQVVDDVLD---MTSTSEQLGKTAGKDVEADKATYPKLLGV 178
Query: 286 EKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+KA E A +L A A+ ELD F + PL + A R+
Sbjct: 179 DKAREYAADLLAMAEAELDGFDA--ERAAPLRHLARFIAYRQ 218
>gi|108805545|ref|YP_645482.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
gi|108766788|gb|ABG05670.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
Length = 299
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/286 (35%), Positives = 158/286 (55%), Gaps = 17/286 (5%)
Query: 53 IDQNLEKAITVKYP--EQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACA 110
I++ LE + P E++ E+MRYS+LA G KR P++C+ + LFG P+A A
Sbjct: 19 IEEYLEGLRFTEEPALERLQEAMRYSLLA-GGKRVRPLLCMESASLFGAPPERVLPSAAA 77
Query: 111 LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPH 170
+E++H SLIHDDLP MD+D RRG+P++H +G +AILAGDA F I H
Sbjct: 78 IELIHTFSLIHDDLPAMDNDDFRRGKPTSHKKFGEAMAILAGDAFFGESLALITDHQEG- 136
Query: 171 LVPEPRVLRVIAEIARAVGSTGMAAGQFLDLE-----GEPNLVEFVQEKKFGEMSECSAV 225
+VL V+ E+A A G G+A GQ LDLE P +E K G + SA
Sbjct: 137 --SAEQVLAVVRELAHATGLAGLAGGQALDLEHTGRRAGPKELELTHHHKTGALIRASAR 194
Query: 226 CGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK---KKKKGK-SYVA 281
G LAGA ++ ++++ RY +G+ +Q+VDD+L+A + R ++ ++GK ++V+
Sbjct: 195 IGAILAGAGEEGLEAISRYATELGLCFQIVDDVLDAVGSSERLGKRAGGDAERGKATFVS 254
Query: 282 FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+G+E A A+ +A L R + G + L + + DR+
Sbjct: 255 VFGLEGARREADAACERALRALGRLE--GRDTSRLEALALFVRDRD 298
>gi|375309124|ref|ZP_09774405.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus sp. Aloe-11]
gi|375078433|gb|EHS56660.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus sp. Aloe-11]
Length = 307
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/251 (41%), Positives = 147/251 (58%), Gaps = 18/251 (7%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + ESM YS+ A G KR P++ +AA E FG +R AA P ACA+EMVH SLIHDDLP
Sbjct: 39 PAVLRESMNYSLTA-GGKRLRPLLVIAAAEAFGGSREAALPVACAVEMVHTYSLIHDDLP 97
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
MDDD RRG+ +NH VYG +AILAGDAL F +V H V +L ++ E++
Sbjct: 98 AMDDDDYRRGKLTNHKVYGEAVAILAGDALLTHAFYSVVQAGRRHGVSSDALLSIVEELS 157
Query: 186 RAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
G+ GM GQ D+ GE L +E++ K ++ S + GG + GAD +++++
Sbjct: 158 EMSGARGMVGGQVADMSGEQGLTGIEELEYIHLHKTADLIIFSLLAGGRIGGADKNQLEA 217
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKS--------YVAFYGVEKAMEVA 292
LR++GR +G+ +Q+ DDIL+ DE K KK +S Y F G+E + +
Sbjct: 218 LRQFGRDLGLAFQIQDDILDLIG----DESKMGKKTQSDVEQEKVTYPFFIGMEASQQQV 273
Query: 293 EELRAKAKEEL 303
E+L A AK+ L
Sbjct: 274 EKLTASAKKAL 284
>gi|206602067|gb|EDZ38549.1| Geranyltranstransferase [Leptospirillum sp. Group II '5-way CG']
Length = 303
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/315 (33%), Positives = 156/315 (49%), Gaps = 27/315 (8%)
Query: 24 CSSLPVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTK 83
S PV+ + L ++ ++ + +L K + Y + ESMRYS+LA G K
Sbjct: 2 ADSQPVAIEAYLNRCKYAVEQFLESLFV-------KELGTDYG-TLAESMRYSLLA-GGK 52
Query: 84 RAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVY 143
R PV+ +AA E + I P LE++H SLIHDDLP MDDD RRG+P+NH +Y
Sbjct: 53 RIRPVLAMAAMEALDRDPIPCIPLLAPLELIHTYSLIHDDLPSMDDDSLRRGKPTNHVIY 112
Query: 144 GVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG 203
G AILAGDAL F + LV L++I E++ G GM GQ +D+
Sbjct: 113 GDATAILAGDALLTHAFTLLSDPDYDKLVSFEIRLKIIHELSVGAGINGMVGGQQMDIAS 172
Query: 204 EP---NL--VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDI 258
E NL +EF+ + K G + S G L A + + L RYG+AVG+ +Q+ DD+
Sbjct: 173 EGKALNLSSLEFLHQHKTGALIRASLRIGALLGKASSSDFERLDRYGQAVGIAFQIADDL 232
Query: 259 LEAKAQTP-------RDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGD 311
L+ + +D+++ K +Y GVEKA +A R K E L+ +G+
Sbjct: 233 LDVEGDAALLGKAAQKDQDRHK---NTYPGLMGVEKARNMA---RHKLNEALEAIGSFGE 286
Query: 312 NVLPLYSFIDYAADR 326
L Y +R
Sbjct: 287 KAKHLRELASYIIER 301
>gi|451982552|ref|ZP_21930861.1| Geranylgeranyl pyrophosphate synthase homolog [Nitrospina gracilis
3/211]
gi|451760198|emb|CCQ92154.1| Geranylgeranyl pyrophosphate synthase homolog [Nitrospina gracilis
3/211]
Length = 296
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/273 (35%), Positives = 148/273 (54%), Gaps = 13/273 (4%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
YP I+ESM YS L+ G KR P + +AA E G +R P A A E +H +LIHDDL
Sbjct: 28 YPVSIHESMHYS-LSAGGKRLRPTLLIAATEAVGGSRKDVLPFAVAAEFLHTYTLIHDDL 86
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P +D+D RRG+P+NH V+G IAILAGDAL F + + +P +LR E+
Sbjct: 87 PALDNDSLRRGKPTNHKVFGEAIAILAGDALLTQAFVLMTNAFLMEAIPHENILRASHEM 146
Query: 185 ARAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A+A+ STG+ GQ +DLE E + +E++ K G + G L AD ++
Sbjct: 147 AQALSSTGVIGGQVVDLESEGKPIEASTLEYIHIYKTGFFFKSCVRVGAILGRADSQQLG 206
Query: 240 SLRRYGRAVGVLYQVVDDILEA---KAQTPRDEEKKKKKGK-SYVAFYGVEKAMEVAEEL 295
++ R+G +G+ +Q++DDIL+ KA+ +D K K +Y A +G+E++ + A+ L
Sbjct: 207 AISRFGAHIGLAFQIIDDILDIVGDKAKIGKDVGSDVSKNKATYPALFGLEESRKKADSL 266
Query: 296 RAKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
+E + K + + PL + R F
Sbjct: 267 ---VEEAITCLKDFDERANPLRDIALFFVQRTF 296
>gi|302872147|ref|YP_003840783.1| polyprenyl synthetase [Caldicellulosiruptor obsidiansis OB47]
gi|302575006|gb|ADL42797.1| Polyprenyl synthetase [Caldicellulosiruptor obsidiansis OB47]
Length = 299
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/302 (34%), Positives = 167/302 (55%), Gaps = 25/302 (8%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG--- 98
L+ Y ++++L+K + K PE IY++MRYSV A G KR P++C+ + ++
Sbjct: 6 LEEYINLSQKNVEEHLDKILKEKSPEIIYQAMRYSVFA-GGKRLRPLLCLLSYQMVSKDK 64
Query: 99 -VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
++R A A+E++H SLIHDDLP MD+D RRG+P++H V+G IAILAGDAL
Sbjct: 65 EIDR-KILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTSHVVFGEAIAILAGDALLN 123
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFL-------DLEGEPNLVEF 210
L + + + + E +++ + A G GM GQ + D++ E L E
Sbjct: 124 LAAE-VCLNWILNYGCEKNLVKAAKYLFWASGVEGMIGGQVIDITNSGQDIKSEELLFE- 181
Query: 211 VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPR--- 267
+ KK + + S VCG +AGA+D + L YG+ +G+ +Q+ DD+L+ + +
Sbjct: 182 MHLKKTSRLIQASCVCGALVAGAEDSVVSDLEEYGKNLGLAFQIRDDVLDVIGDSKKVGK 241
Query: 268 --DEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAAD 325
++ K+KK ++V FYG+E+A ++ + KA +D KKY DN L +Y +
Sbjct: 242 SIGKDIKEKKN-TFVTFYGLEEAQQLVKNYSQKA---IDVIKKY-DNSELLIELTNYLIN 296
Query: 326 RE 327
RE
Sbjct: 297 RE 298
>gi|116620237|ref|YP_822393.1| farnesyl-diphosphate synthase [Candidatus Solibacter usitatus
Ellin6076]
gi|116223399|gb|ABJ82108.1| farnesyl-diphosphate synthase [Candidatus Solibacter usitatus
Ellin6076]
Length = 298
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/304 (35%), Positives = 158/304 (51%), Gaps = 26/304 (8%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
+ DL+ Y +D L++ + PE I+ +MRYS+ A G KR P++C+ A
Sbjct: 5 RMDLRDYLAQQQRLVDSELDRLVPPESAAPETIHRAMRYSLFAGG-KRIRPILCIEAART 63
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
+ AC+LE++H SLIHDDLP +D+D RRG+ +NH V+G +AILAGD+L
Sbjct: 64 VSDDCAGVAAAACSLELIHTYSLIHDDLPALDNDDYRRGKLTNHKVFGDAMAILAGDSLL 123
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGST-GMAAGQFLDLEGE-----PNLVEF 210
L FQ + P+ R R+IAE+A A G+ GM GQ DLEGE L+E
Sbjct: 124 TLAFQVLAQLD----APDARKTRLIAELATASGTVGGMIGGQVADLEGEGKPPDAQLLET 179
Query: 211 VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEE 270
+ K G + S G AGA + + ++L YG+ VG+ +Q+VDDIL+ + + E
Sbjct: 180 IHRAKTGALLRASLRLGAIFAGAAEPQYEALSCYGQHVGLAFQIVDDILDVEESS---EA 236
Query: 271 KKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYA 323
K GK ++ A YG+E + E+A +A L F G+ L L+ D
Sbjct: 237 LGKTAGKDAAQHKITFPAVYGLEPSREMAARECERAHAVLAPF---GERALRLHELADLI 293
Query: 324 ADRE 327
R+
Sbjct: 294 VRRK 297
>gi|302142446|emb|CBI19649.3| unnamed protein product [Vitis vinifera]
Length = 301
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 146/296 (49%), Gaps = 67/296 (22%)
Query: 38 TQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
F+ K Y + + + L++A+ VK P +I+E+MRYS+LA G
Sbjct: 66 NTFNFKDYMIQKASSVHKALDEAVYVKSPIKIHEAMRYSLLAGG---------------- 109
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
R A P ACA+EM+H SLIHDDLPCMD+D RRG+P+NH V+G D+A+LAGD+L
Sbjct: 110 --KRSNAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDSLLA 167
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLE--GEPNL----VEFV 211
F+H+ + T V R++ + E+A+++G+ G+ AGQ +D+ G+ ++ +EF+
Sbjct: 168 FAFEHLATATSG--VSSSRIVAAVGELAKSIGAEGLVAGQVVDISSTGQSDVGLDQLEFI 225
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
K + E + V G L G D+E
Sbjct: 226 HIHKTAALLEAAVVLGALLGGGSDEE---------------------------------- 251
Query: 272 KKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+Y G+EK+ E AE L +AKE+L F + PL + DY A R+
Sbjct: 252 -----ATYPKLMGLEKSREFAENLNKEAKEQLSGFDL--EKAAPLIALADYIAYRQ 300
>gi|147677529|ref|YP_001211744.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum
thermopropionicum SI]
gi|146273626|dbj|BAF59375.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum
thermopropionicum SI]
Length = 294
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/274 (36%), Positives = 148/274 (54%), Gaps = 18/274 (6%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
YP I+ +MRYSVL G KR P + +A E G N P ACA+E++H SL+HDDL
Sbjct: 29 YPPLIHHAMRYSVLG-GGKRLRPALVMAGAEAVGGNAADVLPAACAVELIHTYSLVHDDL 87
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MD+D RRG+ +NH VYG AILAGDAL L F+ + ++ PE ++RVI E
Sbjct: 88 PAMDNDDYRRGRLTNHKVYGEAAAILAGDALLTLAFELLANNDRAR--PE-NIVRVIREA 144
Query: 185 ARAVGSTGMAAGQFLDL-----EGEPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A A G+ G+ GQ +D E + + +E++ K G + S G LAGA ++++
Sbjct: 145 AAAAGTMGLIGGQVVDTFSAGKEIDESTLEYIHRHKTGALYRFSVRAGAMLAGAQEEQLA 204
Query: 240 SLRRYGRAVGVLYQVVDDIL-----EAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEE 294
SL Y +G+ +Q+ DDIL E K P + + +K +Y + +G+E + + A +
Sbjct: 205 SLTAYAEHLGLAFQIKDDILDVEGDEKKIGKPVGSDVRNRK-STYPSLFGMEYSRKKARQ 263
Query: 295 LRAKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
AK L F D + L F+ DR+F
Sbjct: 264 AVEMAKAALQPFGGEADFLRMLAQFV---IDRDF 294
>gi|115379699|ref|ZP_01466777.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps)
[Stigmatella aurantiaca DW4/3-1]
gi|310821402|ref|YP_003953760.1| geranylgeranyl diphosphate synthase [Stigmatella aurantiaca
DW4/3-1]
gi|115363289|gb|EAU62446.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps)
[Stigmatella aurantiaca DW4/3-1]
gi|309394474|gb|ADO71933.1| Geranylgeranyl diphosphate synthase [Stigmatella aurantiaca
DW4/3-1]
Length = 312
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/315 (33%), Positives = 169/315 (53%), Gaps = 26/315 (8%)
Query: 25 SSLPVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYP---EQIYESMRYSVLAKG 81
S+ +SA + ++ D + + E Q + +A+ +P + ++R ++LA G
Sbjct: 2 SAANLSARAHEATSSIDFRRR----LHERQQLVARALDEHFPPGAGHLTAAIREALLADG 57
Query: 82 TKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHT 141
KR P++C+ ACE G + AA P ACALEM+H +L+HDDLP MDD +R G+P+ H
Sbjct: 58 -KRLRPILCLEACEWVGGSVKAALPAACALEMIHKMTLVHDDLPAMDDAETRNGRPALHK 116
Query: 142 VYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL 201
V+G +AILAGDAL F + S VP RV I + +A+G+TG+A GQ LD+
Sbjct: 117 VHGEALAILAGDALLVHAFGLLASTRG---VPAERVTVAIRRLCQALGTTGLAGGQALDV 173
Query: 202 ----EG-EPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVD 256
EG P ++ V K E + V G + GAD ++++L RYG +G +Q+ D
Sbjct: 174 LSQTEGVTPEKLDHVHTWKTASFFEVAIVIGAEMGGADASQVEALARYGMLLGRAFQISD 233
Query: 257 DILEAKAQTPRDEEKKKKKGK--SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVL 314
D+L+A+ +EK K +G+ +YV +GVE A EL +A + K G ++
Sbjct: 234 DLLDAR------DEKGKVEGEVTNYVQLHGVEGARRKLRELLNQAVSSIASVK--GGDIQ 285
Query: 315 PLYSFIDYAADREFS 329
L + +R ++
Sbjct: 286 LLAGITELVWERSWN 300
>gi|260893255|ref|YP_003239352.1| polyprenyl synthetase [Ammonifex degensii KC4]
gi|260865396|gb|ACX52502.1| Polyprenyl synthetase [Ammonifex degensii KC4]
Length = 286
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/267 (39%), Positives = 145/267 (54%), Gaps = 16/267 (5%)
Query: 53 IDQNLEKAITVKY--PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIA-AFPTAC 109
I++ L++ + ++ P I++SMRYSVL G KR P + + A E G + AC
Sbjct: 14 IEEALDRYLPPEFAPPHPIHQSMRYSVLG-GGKRLRPALLLGAAEAVGADVAEDLLLAAC 72
Query: 110 ALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPP 169
+E++H SL+HDDLP MD+D RRG+P++H V+G IAIL GDAL LGF+ +
Sbjct: 73 GIELIHCYSLVHDDLPAMDNDDFRRGRPTSHRVFGEAIAILTGDALLTLGFELLARAALV 132
Query: 170 HLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN-----LVEFVQEKKFGEMSECSA 224
LRVI E+ARA GS GM GQ LDL G N L+E + KK G + +
Sbjct: 133 ARQGSEVGLRVIVEVARAAGSEGMVGGQVLDLGGSKNADPALLLEEIHRKKTGALFVAAV 192
Query: 225 VCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVAFYG 284
G L GA ++ +Q L Y +G+ +Q+VDDIL+ DEE K K +Y A +G
Sbjct: 193 RAGALLGGAQEEALQKLTLYAEELGLAFQIVDDILDL------DEEAKLSK-LTYPAVFG 245
Query: 285 VEKAMEVAEELRAKAKEELDRFKKYGD 311
+ A AEE KA LD F D
Sbjct: 246 LPAARARAEEAVKKALSALDSFGPEAD 272
>gi|374324623|ref|YP_005077752.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus terrae
HPL-003]
gi|357203632|gb|AET61529.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus terrae
HPL-003]
Length = 307
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/277 (37%), Positives = 155/277 (55%), Gaps = 20/277 (7%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKY--PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
LK Y T + + L + + P + E+M YS L G KR P++ +AA E FG
Sbjct: 13 LKEYLTGTVDAVSSALTEQFPAHWSIPAVLREAMNYS-LNAGGKRLRPLLVIAATEAFGG 71
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+R AA P ACA+EMVH SLIHDDLP MDDD RRG+ +NH VYG +A+LAGDAL
Sbjct: 72 SREAALPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEAVAVLAGDALLTHA 131
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEK 214
F +V H + +L ++ E++ G+ GM GQ D+ GE + +E++
Sbjct: 132 FYSVVQSGRRHGISSDALLSIVEELSEMSGARGMVGGQVADMSGEQGMTGIEELEYIHLH 191
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKK 274
K ++ S + GG + GAD +++++LR++GR +G+ +Q+ DDIL+ DE K K
Sbjct: 192 KTADLIIFSLLAGGRIGGADKNQLEALRQFGRDLGLAFQIQDDILDLIG----DESKMGK 247
Query: 275 KGKS--------YVAFYGVEKAMEVAEELRAKAKEEL 303
K +S Y F G+E + + E+L A AK+ L
Sbjct: 248 KTQSDVEQEKVTYPFFIGMEASQQQVEKLTASAKKAL 284
>gi|289522987|ref|ZP_06439841.1| geranyltranstransferase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503530|gb|EFD24694.1| geranyltranstransferase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 298
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 153/289 (52%), Gaps = 21/289 (7%)
Query: 38 TQFDLKTYWTTLITEIDQNLEKAITV-KYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
+ +LK + + +ID LE + + PE + + + YS+L G KR PV+C E
Sbjct: 2 SNVELKQIFESKKEKIDTYLENILNNDEIPEVLCQCIAYSLL-NGGKRIRPVLCQITAEK 60
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
G++ P A A+EM H ASLIHDDLPCMD+D RRG+ +NH VYG +A+LAGD+L
Sbjct: 61 LGIDPDGVLPLAAAIEMAHTASLIHDDLPCMDNDDYRRGKLTNHKVYGEAMAVLAGDSLL 120
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL-----EGEPNLVEFV 211
GF+ + P + +L + + A+G G+ GQ LD+ EGE + +
Sbjct: 121 AYGFELCLQELPRLGFTQSNILNALKIFSHAIGPCGICGGQALDITQEGHEGEEEFLWKM 180
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAK---AQTPRD 268
E K + S L GA + + L YG +G+ +Q++DDIL+ ++ +
Sbjct: 181 CELKTATLLRASITASAALVGAGEKTMSCLHNYGTHLGISFQIIDDILDVTGTISELGKT 240
Query: 269 EEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPL 316
K K+GK ++VA +G+E+A E+A ++ KK D++LPL
Sbjct: 241 PGKDAKEGKLTFVALHGLERAKELA----------MEETKKAIDSILPL 279
>gi|239827666|ref|YP_002950290.1| polyprenyl synthetase [Geobacillus sp. WCH70]
gi|239807959|gb|ACS25024.1| Polyprenyl synthetase [Geobacillus sp. WCH70]
Length = 297
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/253 (37%), Positives = 136/253 (53%), Gaps = 16/253 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P I +M YS L G KR P++ A FG P ACA+EM+H SLIHDDLP
Sbjct: 31 PGTIKRAMSYS-LEAGGKRIRPLLLFATLHSFGKEPDIGLPVACAIEMIHTYSLIHDDLP 89
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
MD+D RRG+P+NH V+G +AILAGD L FQ I + +VP ++ R+I E+A
Sbjct: 90 SMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQVIAEMSDARIVPATKI-RLIEELA 148
Query: 186 RAVGSTGMAAGQFLDLEGEPN-----LVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM AGQ D+EGE +E++ K G+M + S + G LA A D+++
Sbjct: 149 KAAGPEGMVAGQVADIEGEGKQLSLEQLEYIHRHKTGKMLQYSVLAGALLADAKDEQLHH 208
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPR-------DEEKKKKKGKSYVAFYGVEKAM--EV 291
L + +G+ +Q+ DDIL+ + + D E KK S + G ++ + +
Sbjct: 209 LHTFASHLGLAFQIRDDILDIEGSEEKIGKRVGSDIENKKVTYPSLLTIAGAKEKLSFHI 268
Query: 292 AEELRAKAKEELD 304
AE R K E++
Sbjct: 269 AEAKRYLQKAEIN 281
>gi|384462224|ref|YP_005674819.1| geranyltranstransferase [Clostridium botulinum F str. 230613]
gi|295319241|gb|ADF99618.1| geranyltranstransferase [Clostridium botulinum F str. 230613]
Length = 290
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/268 (35%), Positives = 146/268 (54%), Gaps = 19/268 (7%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
Y ++IYE+M YS+ A G KR PV+ + L+ + A P A A+EM+H SLIHDDL
Sbjct: 25 YDKKIYEAMAYSLEA-GGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDL 83
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MD+D RRG+P+NH ++G IAILAGDAL + ++ L + L+ I
Sbjct: 84 PAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYS---LKNGEKALKACYTI 140
Query: 185 ARAVGSTGMAAGQFLDLEGEPNLVE-----FVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A+A G GM GQ +D+ E + ++Q+KK G + + S + G L A +I+
Sbjct: 141 AKAAGVDGMIGGQVVDILSEDKSISLDELYYMQQKKAGALIKASILAGAILGSATYTDIE 200
Query: 240 SLRRYGRAVGVLYQVVDDILEAKA-------QTPRDEEKKKKKGKSYVAFYGVEKAMEVA 292
L YG +G+ +Q+ DDIL+ + +T DE+ K ++V YG+EK E+
Sbjct: 201 LLGEYGDNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHK---TTFVKVYGIEKCNELC 257
Query: 293 EELRAKAKEELDRFKKYGDNVLPLYSFI 320
E+ K + L++ KK D + + F+
Sbjct: 258 TEMTNKCFDILNKIKKNTDKLKEITMFL 285
>gi|157273307|gb|ABV27206.1| geranylgeranyl diphosphate synthase [Candidatus Chloracidobacterium
thermophilum]
Length = 292
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/257 (38%), Positives = 144/257 (56%), Gaps = 17/257 (6%)
Query: 42 LKTYWTTLITEIDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
++ Y+ + E+++ L++ + +P +I+E+MRYS++A G KR P++ +AA E FG
Sbjct: 2 IEAYFAEKVPEVNRWLDRLMPPATTFPPRIHEAMRYSLMAGG-KRLRPILVLAAGEAFGG 60
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+P ACA EMVH SLIHDDLP MD+D RRG P+ H + AILAGD L
Sbjct: 61 APERLYPVACAFEMVHTYSLIHDDLPAMDNDDLRRGMPTCHKQFDEATAILAGDGLMTHA 120
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGST-GMAAGQFLDLEGEPNLVE-----FVQE 213
F+ + P + +RVI E+A G+ GM AGQ +DLE E ++ F+
Sbjct: 121 FRILAEMD----APAEQKVRVIRELAVGSGTVEGMIAGQIVDLEAERKPIDAERLKFIHR 176
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA---QTPRDEE 270
K G + + VCGG +AGA + ++ L YG VG+ +Q+ DDIL+ A Q +
Sbjct: 177 AKTGALIRGAVVCGGIVAGATESDLALLAAYGDRVGLAFQIADDILDETATAEQLGKTPG 236
Query: 271 KKKKKGK-SYVAFYGVE 286
K GK +Y A YG+E
Sbjct: 237 KDAAAGKATYPALYGLE 253
>gi|187779512|ref|ZP_02995985.1| hypothetical protein CLOSPO_03108 [Clostridium sporogenes ATCC
15579]
gi|187773137|gb|EDU36939.1| polyprenyl synthetase [Clostridium sporogenes ATCC 15579]
Length = 290
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 145/268 (54%), Gaps = 19/268 (7%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
Y ++IYE+M YS+ A G KR PV+ + L+ + A P A A+EM+H SLIHDDL
Sbjct: 25 YDKKIYEAMAYSLEA-GGKRIRPVLLLNTYALYKEDYKKAMPIAAAIEMIHTYSLIHDDL 83
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MD+D RRG+P+NH ++G IAILAGDAL + ++ L L+ I
Sbjct: 84 PAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYS---LKNGENALKACYTI 140
Query: 185 ARAVGSTGMAAGQFLDLEGEPNLVE-----FVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A+A G GM GQ +D+ E + ++ +KK G + + S + G L A +I+
Sbjct: 141 AKAAGVDGMIGGQVVDILSEDKSISLDELYYMHKKKTGALIKASILAGAILGSATSTDIE 200
Query: 240 SLRRYGRAVGVLYQVVDDILEAKA-------QTPRDEEKKKKKGKSYVAFYGVEKAMEVA 292
L YG +G+ +Q+ DDIL+ + +T DE+ K ++V YG++K E+
Sbjct: 201 LLGEYGDNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHK---TTFVKVYGIDKCNELC 257
Query: 293 EELRAKAKEELDRFKKYGDNVLPLYSFI 320
E+ K + L++ KK DN+ + F+
Sbjct: 258 TEMTNKCFDILNKIKKNTDNLKEITMFL 285
>gi|424836170|ref|ZP_18260827.1| geranyltranstransferase [Clostridium sporogenes PA 3679]
gi|365977572|gb|EHN13671.1| geranyltranstransferase [Clostridium sporogenes PA 3679]
Length = 290
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/268 (35%), Positives = 145/268 (54%), Gaps = 19/268 (7%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
Y ++IYESM YS+ A G KR P++ + L+ + A P A A+EM+H SLIHDDL
Sbjct: 25 YDKEIYESMAYSLEA-GGKRIRPILFLNTYSLYKEDYKQAIPIAAAIEMIHTYSLIHDDL 83
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MD+D RRG+P+NH ++G IAILAGDAL + ++ L L+ I
Sbjct: 84 PAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFDYS---LKNGENALKACYTI 140
Query: 185 ARAVGSTGMAAGQFLDLEGEPNLVE-----FVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A+A G GM GQ +D+ E + ++ +KK G + + S + G L A +I+
Sbjct: 141 AKAAGVDGMIGGQVVDILSEDKSISLDELYYMHKKKTGALIKASILAGAILGSATSTDIE 200
Query: 240 SLRRYGRAVGVLYQVVDDILEAKA-------QTPRDEEKKKKKGKSYVAFYGVEKAMEVA 292
L YG +G+ +Q+ DDIL+ + +T DE+ K ++V YGVEK E+
Sbjct: 201 LLGEYGDNLGLAFQIKDDILDVEGDITTLGKKTKSDEDNHK---TTFVKVYGVEKCNELC 257
Query: 293 EELRAKAKEELDRFKKYGDNVLPLYSFI 320
E+ K + L++ +K DN+ + F+
Sbjct: 258 TEMTNKCFDILNKIEKNIDNLKEITMFL 285
>gi|160934292|ref|ZP_02081679.1| hypothetical protein CLOLEP_03163 [Clostridium leptum DSM 753]
gi|156866965|gb|EDO60337.1| polyprenyl synthetase [Clostridium leptum DSM 753]
Length = 293
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/250 (38%), Positives = 141/250 (56%), Gaps = 12/250 (4%)
Query: 69 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMD 128
+ E+M YS+LA G KR P + + C + G + AA P ACA+EM+H+ SLIHDDLPCMD
Sbjct: 29 VIEAMEYSLLA-GGKRIRPTLTLEFCRVCGGDVQAAMPFACAVEMIHSYSLIHDDLPCMD 87
Query: 129 DDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAV 188
+ RRG+P+NH YG DIA+LAGD L L F+ +S L R +A+A
Sbjct: 88 NSDLRRGRPANHIQYGEDIALLAGDGLLTLAFETALSPESIKLAGAQRGAEAARLLAKAA 147
Query: 189 GSTGMAAGQFLDLEGEPNL--VEFVQE---KKFGEMSECSAVCGGFLAGADDDEIQSLRR 243
G+ GM GQ +DL+ E +E + E KK G + + +A G +AGAD + ++
Sbjct: 148 GAEGMVGGQVIDLQHENQRAPIEVLLEMDRKKTGALIQAAAQMGCAVAGADQKQREAAVE 207
Query: 244 YGRAVGVLYQVVDDILEAKAQ-----TPRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAK 298
Y VG+ +Q+ DDIL+ + P + K +K +YV+ G+EKA ++ EL +
Sbjct: 208 YAACVGLAFQIRDDILDVISDPETLGKPVGSDDKNEK-STYVSLLGMEKAQQLVNELTQQ 266
Query: 299 AKEELDRFKK 308
A+ L F +
Sbjct: 267 AESALSAFSE 276
>gi|310658649|ref|YP_003936370.1| geranyltranstransferase [[Clostridium] sticklandii]
gi|308825427|emb|CBH21465.1| geranyltranstransferase [[Clostridium] sticklandii]
Length = 295
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 141/260 (54%), Gaps = 18/260 (6%)
Query: 60 AITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASL 119
+I V Y +++ ESM+YSV A G KR P++ + +L N ACA+EM+H SL
Sbjct: 23 SINVIYEKKLIESMKYSVQA-GGKRLRPILFLETIKLLNKNPFDFIEIACAIEMIHTYSL 81
Query: 120 IHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLR 179
IHDDLP MD+D RRG+P+NH V+G AILAGD L L + +++ L
Sbjct: 82 IHDDLPAMDNDSLRRGKPTNHVVFGEATAILAGDGLLNLAHEIMIAFVSKKLTKNNINGI 141
Query: 180 VIAEIARAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGAD 234
I ++A G GM AGQ +D+E E + ++F+ K G + E S V ++ AD
Sbjct: 142 NII--SKAAGINGMIAGQAVDIESEGKSIDIDTMKFIHSNKTGALIEASIVAAAVMSDAD 199
Query: 235 DDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEK 287
D I +L+ Y + +G+ +Q+ DDIL+ + + E KK G +Y ++G+EK
Sbjct: 200 DTRIAALKTYAKYIGLAFQITDDILDIEGN---EAELGKKIGSDELNDKATYPKYFGLEK 256
Query: 288 AMEVAEELRAKAKEELDRFK 307
+ E A+ A E L+ F+
Sbjct: 257 SKEYAKNTITNAIESLNVFE 276
>gi|333979347|ref|YP_004517292.1| polyprenyl synthetase [Desulfotomaculum kuznetsovii DSM 6115]
gi|333822828|gb|AEG15491.1| Polyprenyl synthetase [Desulfotomaculum kuznetsovii DSM 6115]
Length = 296
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/234 (38%), Positives = 135/234 (57%), Gaps = 12/234 (5%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
YP I++++RYS+ A G KR PV+ +AA E G + P ACALE++H SLIHDDL
Sbjct: 28 YPPVIHQAIRYSLFAGG-KRLRPVLALAAAETVGGDPARVLPAACALELIHTYSLIHDDL 86
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MD+D RRG+P+ H VYG +AILAGDAL F + + L P RV++VI E+
Sbjct: 87 PAMDNDDFRRGKPTCHRVYGEAVAILAGDALLTHAFALLAKNAQNQLAPAERVVQVIEEV 146
Query: 185 ARAVGSTGMAAGQFLD-----LEGEPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A A G+ G+ GQ +D + +E++ K G + + G LAGA + +++
Sbjct: 147 AAAAGTLGLIGGQVVDTLAADTAVDAATLEYIHRHKTGALYRVAVRAGAILAGAKEKQLE 206
Query: 240 SLRRYGRAVGVLYQVVDDILE-----AKAQTPRDEEKKKKKGKSYVAFYGVEKA 288
+L Y +G+ +Q+ DDIL+ A+ P +++ KK +Y A +G++ A
Sbjct: 207 ALTIYAENLGLAFQIQDDILDVEGDPARLGKPVGSDERNKKA-TYPALFGLDVA 259
>gi|150390268|ref|YP_001320317.1| polyprenyl synthetase [Alkaliphilus metalliredigens QYMF]
gi|149950130|gb|ABR48658.1| Polyprenyl synthetase [Alkaliphilus metalliredigens QYMF]
Length = 295
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/288 (34%), Positives = 146/288 (50%), Gaps = 22/288 (7%)
Query: 54 DQNLEKAITVKYPEQ--IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACAL 111
D+ L + VK + + ++MRYS+ A G KR P++ +A LF N P ACAL
Sbjct: 15 DKKLHHYLDVKEDKNKTVIDAMRYSIFA-GGKRLRPIVAIATYNLFKDNLEEVLPYACAL 73
Query: 112 EMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHL 171
EM+H SLIHDDLP MDDD RRG+ +NH VYG IAILAGDAL F+ ++SH
Sbjct: 74 EMIHTYSLIHDDLPAMDDDNYRRGKLTNHKVYGEGIAILAGDALLNYAFEIMISHARTQS 133
Query: 172 VPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE-----PNLVEFVQEKKFGEMSECSAVC 226
L+ I EIA+A G GM GQ +DLE E N + ++ K + +
Sbjct: 134 NANVH-LQAIEEIAKAAGMNGMIGGQVVDLESENKQVDKNTLNYIHYNKTAALIISAFKV 192
Query: 227 GGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPR-------DEEKKKKKGKSY 279
G +A A + +I + G+ +G+ +Q+ DDIL+ + D E K +Y
Sbjct: 193 GAIIAEATETDIAHMNSLGKNIGLAFQIQDDILDIIGDEKKLGKDIGSDVENNK---STY 249
Query: 280 VAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+ YG++ +++ + L + L+ YG L+ Y +RE
Sbjct: 250 PSLYGLQTSIDEVKRLTTNVDKVLNI---YGKRSRFLHDLSHYLVNRE 294
>gi|325983215|ref|YP_004295617.1| Geranyltranstransferase [Nitrosomonas sp. AL212]
gi|325532734|gb|ADZ27455.1| Geranyltranstransferase [Nitrosomonas sp. AL212]
Length = 297
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 101/276 (36%), Positives = 157/276 (56%), Gaps = 22/276 (7%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
PE+++++MRYSVL G KR P++ AA EL + A A+E++HA SL+HDDLP
Sbjct: 31 PERLHKAMRYSVLGGG-KRVRPLLSFAAGELVAADLERVTVVAAAVELIHAYSLVHDDLP 89
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GD+L L F+ +++ P +PE + L++IA++A
Sbjct: 90 CMDDDILRRGKPTCHVEYDEATALLTGDSLQTLAFE-LLAEKPLADIPETQ-LQMIAQLA 147
Query: 186 RAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCGGFLAGA-DDDEIQ 239
A GS GMA GQ DL+ + +EF+ K G + + + G + +D+++
Sbjct: 148 LASGSRGMAGGQAFDLDSVGKMLSLPELEFMHIHKTGALIRAAVMLGARCSSCLNDEQLA 207
Query: 240 SLRRYGRAVGVLYQVVDDILEAKAQTP-------RDEEKKKKKGKSYVAFYGVEKAMEVA 292
L + + VG+ +QVVDD+L+ +A T +D E K +YV+ GV +A E+A
Sbjct: 208 QLDHFAKCVGLAFQVVDDLLDTEATTATLGKTAGKDAEHNK---PTYVSILGVSQARELA 264
Query: 293 EELRAKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
E+L+ A + LD F + L L D+ R+F
Sbjct: 265 EKLQHDAYQALDGFN---EAALRLRQVTDFIIKRKF 297
>gi|117924356|ref|YP_864973.1| farnesyl-diphosphate synthase [Magnetococcus marinus MC-1]
gi|117608112|gb|ABK43567.1| farnesyl-diphosphate synthase [Magnetococcus marinus MC-1]
Length = 294
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 107/301 (35%), Positives = 153/301 (50%), Gaps = 23/301 (7%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITV--KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
+LK Y ++ L++ + + P + +MRYS+L G KR P++ +A CE
Sbjct: 1 MELKPYLADRKYLVESALDRLLPAADREPRALTGAMRYSLLIGG-KRLRPILTLACCEAV 59
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G A ACA+E VH SLIHDDLP MD+D RRG P+ H YG AILAGDAL
Sbjct: 60 GGALERAMNFACAMECVHTYSLIHDDLPAMDNDDLRRGHPTCHRQYGEATAILAGDALLT 119
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEK--- 214
F+ + + ++PE R L +I E+A A G+ GM GQ LD++GE +E VQ +
Sbjct: 120 HAFE-LAAKPVTGVLPEAR-LELIGELAMAAGTYGMVGGQMLDIQGEKRPLELVQLQNIH 177
Query: 215 --KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKK 272
K G + + + G L G D+++ L+RYG A+G+ +Q+ DDIL+ T +
Sbjct: 178 IHKTGALIRVACLAGARLGGGTPDQVKHLKRYGEALGLAFQITDDILDEVGDT---KTLG 234
Query: 273 KKKG-------KSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAAD 325
K G +Y G+ +A E AE L +A L F D PL + Y
Sbjct: 235 KATGVDRALDKATYPKLMGLAQAREAAENLMQEATRCLTEFGPQAD---PLRALAQYVIA 291
Query: 326 R 326
R
Sbjct: 292 R 292
>gi|390453366|ref|ZP_10238894.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus peoriae KCTC
3763]
Length = 307
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 147/251 (58%), Gaps = 18/251 (7%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + ESM YS+ A G KR P++ +AA E FG +R AA P ACA+EMVH SLIHDDLP
Sbjct: 39 PAVLRESMNYSLTAGG-KRLRPLLVIAAAEAFGGSREAALPVACAVEMVHTYSLIHDDLP 97
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
MDDD RRG+ +NH VYG +AILAGDAL F +V H + +L ++ E++
Sbjct: 98 AMDDDDYRRGKLTNHKVYGEAVAILAGDALLTHAFYSVVQAGRRHGISSDALLSIVEELS 157
Query: 186 RAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
G+ GM GQ D+ GE L +E++ K ++ S + GG + GA+ +++++
Sbjct: 158 EMSGARGMVGGQVADMSGEQGLTGIEELEYIHLHKTADLIIFSLLAGGRIGGANKNQLEA 217
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKS--------YVAFYGVEKAMEVA 292
LR++GR +G+ +Q+ DDIL+ DE K KK +S Y F G+E + +
Sbjct: 218 LRQFGRDLGLAFQIQDDILDLIG----DESKMGKKTQSDVEQEKVTYPFFIGMEASQQQV 273
Query: 293 EELRAKAKEEL 303
E+L A AK+ L
Sbjct: 274 EKLTATAKKAL 284
>gi|257875398|ref|ZP_05655051.1| geranyltranstransferase [Enterococcus casseliflavus EC20]
gi|257809564|gb|EEV38384.1| geranyltranstransferase [Enterococcus casseliflavus EC20]
Length = 295
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 98/273 (35%), Positives = 153/273 (56%), Gaps = 24/273 (8%)
Query: 53 IDQNLEKAITVKYPEQ-IYESMRYSVLAKGTKRAPPVMCVAACELFG--VNRIAAFPTAC 109
I++ +E+ + +Q ++ESM+YS+ A G KR P++ VA F +N A + A
Sbjct: 12 IEEVMERFVKEHTSDQRLFESMQYSIQAGG-KRIRPLLLVATVAAFHKPIN-TAVYQCAA 69
Query: 110 ALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPP 169
ALEMVH SLIHDDLP MD+D RRG+P+NH V+G +AILAGD L FQ +
Sbjct: 70 ALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTAAFQLVAM---A 126
Query: 170 HLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----VQEKKFGEMSECSA 224
+ +VL ++ ++++A G+ GM AGQ D++GE + + E+K GE+ +
Sbjct: 127 EIEANQKVL-LLQQLSKAAGTQGMVAGQAADIQGENQALRLEELMSIHERKTGELIRFAV 185
Query: 225 VCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP-------RDEEKKKKKGK 277
+ GG LA ++ + L R+ + +G+ +Q+ DD+L+A + T RD+E K
Sbjct: 186 IAGGVLADQTEEVLHELDRFAQHIGLAFQIRDDLLDATSTTEELGKVVRRDDELAK---S 242
Query: 278 SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYG 310
+Y A G+ A + E KAKE L + +YG
Sbjct: 243 TYPALLGLAGAQQALTEELGKAKEILAQLSRYG 275
>gi|226941241|ref|YP_002796315.1| IspA [Laribacter hongkongensis HLHK9]
gi|226716168|gb|ACO75306.1| IspA [Laribacter hongkongensis HLHK9]
Length = 297
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 102/300 (34%), Positives = 157/300 (52%), Gaps = 21/300 (7%)
Query: 44 TYWTTLITEIDQNLEKAITVKYPEQ------IYESMRYSVLAKGTKRAPPVMCVAACELF 97
T + +T+I Q++E A+ P ++++MRY+ L G KR P++ AA ++
Sbjct: 4 TDFLRWMTDIQQHVETALAASLPAGTHAATPLFDAMRYAAL-DGGKRVRPLLVFAAGDVS 62
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G A ACA+E +HA SL+HDDLPCMDDD RRG+P+ H +G +A+LAGDAL
Sbjct: 63 GATPEALSAAACAVECIHAYSLVHDDLPCMDDDVLRRGKPTCHIAHGEAMALLAGDALQA 122
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG-----EPNLVEFVQ 212
F+ +++ P +VP R L +++ +A A G GM GQ +DL + +E++
Sbjct: 123 HAFE-LLAIPLPGVVPA-RQLAMVSALAHAAGPRGMCGGQAIDLAAVGHALDQTALEYMH 180
Query: 213 EKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKK 272
K G + + + G DDDE+ +L RY R +G+ +QV+DD+L+ +A + +
Sbjct: 181 CLKTGALIQAAVRLGALAGSPDDDELAALDRYARRIGLAFQVIDDVLDCEADSATLGKTA 240
Query: 273 KKKGK----SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
K +YV+ G+ +A A L A A E L F G L DY R F
Sbjct: 241 GKDAAHDKPTYVSLMGLGEARSYAHALLADAHEALALF---GARARRLQQLADYIVARSF 297
>gi|312899122|ref|ZP_07758500.1| putative geranyltranstransferase [Megasphaera micronuciformis
F0359]
gi|310619789|gb|EFQ03371.1| putative geranyltranstransferase [Megasphaera micronuciformis
F0359]
Length = 293
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 148/281 (52%), Gaps = 17/281 (6%)
Query: 53 IDQNLEKAITVKYPE--QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACA 110
ID L + + PE +YE+M YS+ A G KR PV+ +A E G + A ACA
Sbjct: 14 IDTRLAELLQTSTPEFSGLYEAMNYSLNAGG-KRIRPVLFLAVLEAAGTDPDAFLDLACA 72
Query: 111 LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPH 170
LE VH+ SLIHDDLP MD+D RRG+P+NH VYG A+LAGD L F+ + + +
Sbjct: 73 LECVHSYSLIHDDLPAMDNDDFRRGKPTNHKVYGDGTAVLAGDGLLTYAFELMAAQSA-- 130
Query: 171 LVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAV 225
P ++L+ I A A G GM GQ+ DL+ E + +E + K G +
Sbjct: 131 -APAHKILQAIRIFAHAAGPAGMVGGQYFDLQSEGGVPTRAAMELMHRSKTGVIFTAIVQ 189
Query: 226 CGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL-----EAKAQTPRDEEKKKKKGKSYV 280
LAG ++ +++L YG +G+ +Q+ DDIL E + P ++K K +YV
Sbjct: 190 MAALLAGVRNETMKALTTYGDQLGLAFQITDDILDVVGSEKEMGKPVGSDEKNHK-TTYV 248
Query: 281 AFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFID 321
+ GVE A E A++ A+A L F + + + L +++
Sbjct: 249 SLLGVEGAREEAKQTTARALAALQEFDENAEFLRQLVIYLE 289
>gi|332653017|ref|ZP_08418762.1| geranyltranstransferase [Ruminococcaceae bacterium D16]
gi|332518163|gb|EGJ47766.1| geranyltranstransferase [Ruminococcaceae bacterium D16]
Length = 293
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 97/250 (38%), Positives = 143/250 (57%), Gaps = 20/250 (8%)
Query: 69 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMD 128
+ E+M YS++A G KR PV+ + +C + G + A P ACA+EM+H SLIHDDLP MD
Sbjct: 34 LREAMEYSLMAGG-KRIRPVLVLESCRMCGGDPEVALPFACAVEMIHTYSLIHDDLPAMD 92
Query: 129 DDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAV 188
DD RRG+P+NH VYG AILAGD L FQ + T L + +V+ +A ++ A
Sbjct: 93 DDELRRGRPTNHMVYGEATAILAGDGLLTAAFQTL---TQAQLTAQ-QVVDAVACLSLAA 148
Query: 189 GSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRR 243
G GM GQ LD+ GE +E +Q K G + +A G AG ++ +S+R+
Sbjct: 149 GPDGMVGGQALDMAGEGRSLTRAELEQLQSLKTGALIAAAAELGCIAAGGSPEQRESVRQ 208
Query: 244 YGRAVGVLYQVVDDILEAKAQTPRDEE-------KKKKKGKSYVAFYGVEKAMEVAEELR 296
Y + +G +QV DDIL+ T DEE ++K+ ++V+ G++++ E+ EL
Sbjct: 209 YAQCLGRAFQVQDDILDV---TSTDEELGKPTGSDREKEKNTFVSLLGLDRSRELVAELT 265
Query: 297 AKAKEELDRF 306
A+A LD F
Sbjct: 266 AQAVSALDGF 275
>gi|210622494|ref|ZP_03293199.1| hypothetical protein CLOHIR_01147 [Clostridium hiranonis DSM 13275]
gi|210154207|gb|EEA85213.1| hypothetical protein CLOHIR_01147 [Clostridium hiranonis DSM 13275]
Length = 295
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 100/277 (36%), Positives = 146/277 (52%), Gaps = 20/277 (7%)
Query: 63 VKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHD 122
V Y + I E+M YS L+ G KR PV+ + AC + G + A P A A+EM+H SLIHD
Sbjct: 26 VGYQKTIMEAMNYS-LSSGGKRLRPVLTLEACRIVGGDTDNAIPFAAAIEMIHTYSLIHD 84
Query: 123 DLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIA 182
DLP +D+D RRG+ +NH V+G +AILAGDAL ++ ++ + PE R LR
Sbjct: 85 DLPALDNDDLRRGRATNHKVFGEAMAILAGDALLNFAYETMLKESIGKENPE-RYLRATY 143
Query: 183 EIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDE 237
EIA+ G GM GQ +D++ E + +++ E K M G + GAD+ +
Sbjct: 144 EIAKGAGIYGMVGGQVVDVQSENMQIPKEKLDYIHENKTAAMMVGCMRAGAAIGGADEKQ 203
Query: 238 IQSLRRYGRAVGVLYQVVDDIL-----EAK--AQTPRDEEKKKKKGKSYVAFYGVEKAME 290
++ + Y +G+ +Q+VDDIL EAK D E K +Y + G+EK+ E
Sbjct: 204 MELITDYANKIGLAFQIVDDILDIVGDEAKLGKHVGSDIENNK---STYPSLMGLEKSRE 260
Query: 291 VAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+A EL AK + K D+ L DY R+
Sbjct: 261 IATELIEDAKRSI---SKVTDDTGFLDGLADYILSRD 294
>gi|387929669|ref|ZP_10132346.1| farnesyl diphosphate synthase [Bacillus methanolicus PB1]
gi|387586487|gb|EIJ78811.1| farnesyl diphosphate synthase [Bacillus methanolicus PB1]
Length = 297
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 136/245 (55%), Gaps = 13/245 (5%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P I ESM YS+ A G KR P++ A G + TA A+EM+H SLIHDDLP
Sbjct: 31 PSIIKESMLYSLEA-GGKRIRPLLLFATLHALGHDSKKGLNTAAAIEMIHTYSLIHDDLP 89
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
MD+D RRG+P+NH V+G A+LAGDAL FQ ++S TP L +I E++
Sbjct: 90 SMDNDDFRRGKPTNHKVFGEAFAVLAGDALLTYSFQ-MISETPEEYAAADTKLNLIRELS 148
Query: 186 RAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G+ GM GQ D+EGE + +E++ K G++ S + G LAGA+D++++
Sbjct: 149 KAAGAEGMVGGQAADIEGEGKQLDLSQLEYIHHHKTGKLLAYSVLAGAMLAGANDEQMKD 208
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQ-----TPRDEEKKKKKGKSYVAFYGVEKAMEVAEEL 295
L ++ +G+ +Q+ DDIL+ + Q P + +K +Y + +E A E +
Sbjct: 209 LSQFAFHLGLAFQIRDDILDLEGQEELIGKPVGSDANNQK-STYPSLLSMEGAKEALTDH 267
Query: 296 RAKAK 300
KAK
Sbjct: 268 IGKAK 272
>gi|435853309|ref|YP_007314628.1| geranylgeranyl pyrophosphate synthase [Halobacteroides halobius DSM
5150]
gi|433669720|gb|AGB40535.1| geranylgeranyl pyrophosphate synthase [Halobacteroides halobius DSM
5150]
Length = 293
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 166/291 (57%), Gaps = 26/291 (8%)
Query: 53 IDQNLEKAITVK--YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACA 110
I+Q LE+ + ++ P+++ ++MRYSVLA G KR P++ + +L G P ACA
Sbjct: 14 INQTLEELLPMEEAKPKKLSQAMRYSVLA-GGKRLRPILTLLVAKLIGEEEKKVLPAACA 72
Query: 111 LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPH 170
LEM+H SLIHDDLPCMDDD RRGQP+NH VYG +A+LAGD+L L F+ I + +
Sbjct: 73 LEMIHNYSLIHDDLPCMDDDDYRRGQPTNHKVYGEAMAVLAGDSLLTLAFETI---SRIN 129
Query: 171 LVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAV 225
+ + +VL E+A A G+ GM GQ D+ E + E++ K G + +
Sbjct: 130 NIDQDKVLLATQELAIAAGNQGMVGGQAADIVAEGQKIDKEGLEYIHTHKTGALLRAAVR 189
Query: 226 CGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKS------- 278
G LAGA+ +E+ +L Y + +G+ +QVVDDIL+ + DEEK K S
Sbjct: 190 IGAILAGANKEELAALTTYAQKIGLAFQVVDDILDIEG----DEEKLGKDVGSDLERDKA 245
Query: 279 -YVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
+ A YG+E+A ++A++L +AKE + F G+ L DY R++
Sbjct: 246 TFPALYGLEEAKKMAQKLCQEAKEAIHIF---GEEAKVLLELADYIIGRDY 293
>gi|33597051|ref|NP_884694.1| geranyltranstransferase [Bordetella parapertussis 12822]
gi|33566502|emb|CAE37758.1| probable geranyltranstransferase [Bordetella parapertussis]
Length = 303
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/270 (37%), Positives = 149/270 (55%), Gaps = 20/270 (7%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVN--RIAAFPT----ACALEMVHAASL 119
P +++E+MRY+VL G KR V+ AA + VN +A + A A+E++HA SL
Sbjct: 34 PTRLHEAMRYAVLGGG-KRVRAVLVYAAGQACPVNGSTLAVGASMDRAAAAVELIHAYSL 92
Query: 120 IHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLR 179
+HDDLPCMDDD RRG+P+ H + A+LAGDAL PL F+ +++ P + V++
Sbjct: 93 VHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGDALQPLAFE-LLAGMP---IAPALVVQ 148
Query: 180 VIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCGGFLAGAD 234
+ARA GS GMA GQ +DL + ++ + K G M CS GG +AGA
Sbjct: 149 AAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQTMHSMKTGAMLACSVTLGGIVAGAS 208
Query: 235 DDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK----SYVAFYGVEKAME 290
Q+L Y +A+G+ +QVVDDIL+ A T + K +YV+ G+++A
Sbjct: 209 STARQALDSYAQAIGLAFQVVDDILDVTADTASLGKTAGKDAADNKPTYVSLLGLDQARA 268
Query: 291 VAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+A+ELR A + L + G + L FI
Sbjct: 269 LAQELRQAAHQALAPLGESGARLGQLADFI 298
>gi|325294212|ref|YP_004280726.1| polyprenyl synthetase [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325064660|gb|ADY72667.1| Polyprenyl synthetase [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 294
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/274 (35%), Positives = 150/274 (54%), Gaps = 17/274 (6%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
+ +++YE+++YS L G KR P++C+A CE+ G N A ACA+EM+H SLIHDDL
Sbjct: 28 FGKRLYEAVKYS-LTVGGKRLRPILCMAGCEVVGGNYEEALTPACAIEMIHTYSLIHDDL 86
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MD+D RRG P+ + AILAGDAL F+ + R ++VI EI
Sbjct: 87 PAMDNDTLRRGHPTTWYKFDEATAILAGDALLNRAFEVLSQWN----FDCDRKIKVIEEI 142
Query: 185 ARAVGSTGMAAGQFLDLEGEP----NLVE--FVQEKKFGEMSECSAVCGGFLAGADDDEI 238
++A G GM GQ D++ E L E F+ K G + S V GG G ++EI
Sbjct: 143 SKASGMLGMVLGQQCDMDAEGRKDVTLEELLFIHRHKTGRLITASVVSGGITGGGSEEEI 202
Query: 239 QSLRRYGRAVGVLYQVVDDILEA---KAQTPRDEEKKKKKGK-SYVAFYGVEKAMEVAEE 294
+L++YG ++G+ +Q++DD+L+ + + ++ +KGK ++V F+GV+ A A E
Sbjct: 203 GTLKKYGDSIGLAFQIIDDVLDVIGDQNKIGKNVGSDLEKGKVTFVTFFGVDGAKRKARE 262
Query: 295 LRAKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
KA L+ F + +L + +RE+
Sbjct: 263 EIEKAISALELFPAKKNELLK--KLAHFIVEREY 294
>gi|358636220|dbj|BAL23517.1| polyprenyl synthetase [Azoarcus sp. KH32C]
Length = 298
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/298 (37%), Positives = 159/298 (53%), Gaps = 33/298 (11%)
Query: 46 WTTLITEIDQNLEKAITVKYP------EQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
+ + EI Q E A+ P ++++ +MRY+VL G KR P++ AA L G
Sbjct: 6 FAAWMEEIQQRTETALADVLPADNIAPQRLHAAMRYAVLGGG-KRVRPLLVHAAGRLAGA 64
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+ ACA+E++HA SL+HDDLPCMDDD RRG+P+ H Y A+L GDAL L
Sbjct: 65 DPARLDRIACAVELIHAYSLVHDDLPCMDDDVLRRGKPTVHVEYDEATALLVGDALQALA 124
Query: 160 FQHIVSHTPPHLVPEPRV-LRVIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQE 213
FQ +++ TP L P V L +IA + RA GS GMA GQ +DL +EF+
Sbjct: 125 FQ-VLADTP--LAATPAVQLEMIALLGRASGSRGMAGGQAIDLGAVGKQLTREELEFMHI 181
Query: 214 KKFGEMSECS----AVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP--- 266
K G + S A CG L +++ L YG+ VG+L+QVVDDIL+A+A T
Sbjct: 182 HKTGALIRASVLLGAQCGDALPA---EQLAPLDHYGKVVGLLFQVVDDILDAQADTATLG 238
Query: 267 ----RDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+D ++ K +YV G+ +A ++E L A A+E L F + L +FI
Sbjct: 239 KTAGKDADQNK---PTYVTLLGMSEARTLSESLLANAQEALSSFGPGAVRLAELANFI 293
>gi|312110282|ref|YP_003988598.1| polyprenyl synthetase [Geobacillus sp. Y4.1MC1]
gi|311215383|gb|ADP73987.1| Polyprenyl synthetase [Geobacillus sp. Y4.1MC1]
Length = 297
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/269 (36%), Positives = 143/269 (53%), Gaps = 21/269 (7%)
Query: 55 QNLEKAI-----TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTAC 109
Q LE A+ + PE I +M YS+ A G KR P++ A FG P AC
Sbjct: 15 QRLENALPHYITRMAAPETIKRAMSYSLEA-GGKRIRPLLLFATLHSFGKEPDIGLPVAC 73
Query: 110 ALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPP 169
A+EM+H SLIHDDLP MD+D RRG+P+NH V+G +AILAGD L FQ I
Sbjct: 74 AIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQVIAEANDA 133
Query: 170 HLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN-----LVEFVQEKKFGEMSECSA 224
+ P ++ R+I E+A+A G GM AGQ D+E E +E++ K G+M + S
Sbjct: 134 RISPMTKI-RLIEELAKAAGPEGMVAGQVADIESEGKQLSLEQLEYIHRHKTGKMLQYSV 192
Query: 225 VCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA-------QTPRDEEKKKKKGK 277
+ G LA A++++++ L + +G+ +Q+ DDIL+ + + D E KK
Sbjct: 193 LAGALLADANNEQLRQLDLFASHLGLAFQIRDDILDIEGLEEKMGKRVGSDMENKKVTYP 252
Query: 278 SYVAFYGVEKAM--EVAEELRAKAKEELD 304
S + G ++ + +AE R K E+D
Sbjct: 253 SLLTIAGAKEKLSFHIAEAKRYLQKAEID 281
>gi|153939221|ref|YP_001391205.1| geranyltranstransferase [Clostridium botulinum F str. Langeland]
gi|152935117|gb|ABS40615.1| geranyltranstransferase [Clostridium botulinum F str. Langeland]
Length = 290
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 145/268 (54%), Gaps = 19/268 (7%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
Y ++IYE+M YS+ A G KR PV+ + L+ + A P A A+EM+H SLIHDDL
Sbjct: 25 YDKKIYEAMAYSLEA-GGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDL 83
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MD+D RRG+P+NH ++G IAILAGDAL + ++ L + L+ I
Sbjct: 84 PAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYS---LKNGEKALKACYTI 140
Query: 185 ARAVGSTGMAAGQFLDLEGEPNLVE-----FVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A+A G GM GQ +D+ E + ++ +KK G + + S + G L A +I+
Sbjct: 141 AKAAGVDGMIGGQVVDILSEDKSISLDELYYMHKKKTGALIKASILAGAILGSATYTDIE 200
Query: 240 SLRRYGRAVGVLYQVVDDILEAKA-------QTPRDEEKKKKKGKSYVAFYGVEKAMEVA 292
L YG +G+ +Q+ DDIL+ + +T DE+ K ++V YG+EK E+
Sbjct: 201 LLGEYGDNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHK---TTFVKVYGIEKCNELC 257
Query: 293 EELRAKAKEELDRFKKYGDNVLPLYSFI 320
E+ K + L++ KK D + + F+
Sbjct: 258 TEMTNKCFDILNKIKKNTDKLKEITMFL 285
>gi|374579594|ref|ZP_09652688.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus youngiae
DSM 17734]
gi|374415676|gb|EHQ88111.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus youngiae
DSM 17734]
Length = 288
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/263 (40%), Positives = 146/263 (55%), Gaps = 21/263 (7%)
Query: 69 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMD 128
+ ESM YS++ G KR PV+ +A+ E G N A ALE++H SLIHDDLP MD
Sbjct: 27 LNESMYYSLIGGG-KRIRPVLALASAEAVGGNPETILRAAVALELIHTYSLIHDDLPAMD 85
Query: 129 DDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAV 188
+D RRG+ SNH V+G AILAGDAL F+ + PE R LRVI E+A A
Sbjct: 86 NDDYRRGRLSNHKVFGEAQAILAGDALLTYAFELLADSDLGQ--PE-RQLRVIREVAVAA 142
Query: 189 GSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRR 243
G GM GQ DL GE N +E + + K G + SA GG LAG +D++++L
Sbjct: 143 GKEGMVGGQVADLAGEGKSLTLNEIEEIHKAKTGALLTVSARLGGILAGGTEDQVKALTD 202
Query: 244 YGRAVGVLYQVVDDILEAKAQTP---RDEEKKKKKGKS-YVAFYGVEKAMEVAEELRA-- 297
Y +A+G+ +Q+ DDIL+ + + ++GKS YV+ G+E A A++L A
Sbjct: 203 YAKALGLAFQIKDDILDIVGDSETLGKPAGSDLRQGKSTYVSLLGLEGA---AQQLHAQI 259
Query: 298 -KAKEELDRFKKYGD--NVLPLY 317
KA+ L+ F + N L LY
Sbjct: 260 LKAQSSLEVFDERAVFLNQLALY 282
>gi|408414645|ref|YP_006625352.1| geranyltranstransferase [Bordetella pertussis 18323]
gi|401776815|emb|CCJ62054.1| probable geranyltranstransferase [Bordetella pertussis 18323]
Length = 303
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/270 (37%), Positives = 148/270 (54%), Gaps = 20/270 (7%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVN--RIAAFPT----ACALEMVHAASL 119
P +++E+MRY+VL G KR + AA + VN +A + A A+E++HA SL
Sbjct: 34 PTRLHEAMRYAVLGGG-KRVRAALVYAAGQACPVNGSTLAVGASMDRAAAAVELIHAYSL 92
Query: 120 IHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLR 179
+HDDLPCMDDD RRG+P+ H + A+LAGDAL PL F+ +++ P + V++
Sbjct: 93 VHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGDALQPLAFE-LLAGMP---IAPALVVQ 148
Query: 180 VIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCGGFLAGAD 234
+ARA GS GMA GQ +DL + ++ + K G M CS GG +AGA
Sbjct: 149 AAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQTMHSMKTGAMLACSVTLGGIVAGAS 208
Query: 235 DDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK----SYVAFYGVEKAME 290
Q+L Y +A+G+ +QVVDDIL+ A T + K +YV+ G+E+A
Sbjct: 209 STARQALDSYAQAIGLAFQVVDDILDVTADTASLGKTAGKDAADNKPTYVSLLGLEQARA 268
Query: 291 VAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+A+ELR A + L + G + L FI
Sbjct: 269 LAQELRQAAHQALAPLGESGARLGQLADFI 298
>gi|33593755|ref|NP_881399.1| geranyltranstransferase [Bordetella pertussis Tohama I]
gi|384205043|ref|YP_005590782.1| geranyltranstransferase [Bordetella pertussis CS]
gi|410420906|ref|YP_006901355.1| geranyltranstransferase [Bordetella bronchiseptica MO149]
gi|427824861|ref|ZP_18991923.1| probable geranyltranstransferase [Bordetella bronchiseptica Bbr77]
gi|33563828|emb|CAE43072.1| probable geranyltranstransferase [Bordetella pertussis Tohama I]
gi|332383157|gb|AEE68004.1| geranyltranstransferase [Bordetella pertussis CS]
gi|408448201|emb|CCJ59882.1| probable geranyltranstransferase [Bordetella bronchiseptica MO149]
gi|410590126|emb|CCN05205.1| probable geranyltranstransferase [Bordetella bronchiseptica Bbr77]
Length = 303
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/270 (37%), Positives = 148/270 (54%), Gaps = 20/270 (7%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVN--RIAAFPT----ACALEMVHAASL 119
P +++E+MRY+VL G KR + AA + VN +A + A A+E++HA SL
Sbjct: 34 PTRLHEAMRYAVLGGG-KRVRAALVYAAGQACPVNGSTLAVGASMDRAAAAVELIHAYSL 92
Query: 120 IHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLR 179
+HDDLPCMDDD RRG+P+ H + A+LAGDAL PL F+ +++ P + V++
Sbjct: 93 VHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGDALQPLAFE-LLAGMP---IAPALVVQ 148
Query: 180 VIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCGGFLAGAD 234
+ARA GS GMA GQ +DL + ++ + K G M CS GG +AGA
Sbjct: 149 AAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQTMHSMKTGAMLACSVTLGGIVAGAS 208
Query: 235 DDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK----SYVAFYGVEKAME 290
Q+L Y +A+G+ +QVVDDIL+ A T + K +YV+ G+E+A
Sbjct: 209 STARQALDSYAQAIGLAFQVVDDILDVTADTASLGKTAGKDAADNKPTYVSLLGLEQARA 268
Query: 291 VAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+A+ELR A + L + G + L FI
Sbjct: 269 LAQELRQAAHQALAPLGESGARLGQLADFI 298
>gi|429246185|ref|ZP_19209527.1| geranyltranstransferase [Clostridium botulinum CFSAN001628]
gi|428756789|gb|EKX79319.1| geranyltranstransferase [Clostridium botulinum CFSAN001628]
Length = 290
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 145/268 (54%), Gaps = 19/268 (7%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
Y ++IYE+M YS+ A G KR PV+ + L+ + A P A A+EM+H SLIHDDL
Sbjct: 25 YDKKIYEAMAYSLEA-GGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDL 83
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MD+D RRG+P+NH ++G IAILAGDAL + ++ L + L+ I
Sbjct: 84 PAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYS---LKNGEKALKACYTI 140
Query: 185 ARAVGSTGMAAGQFLDLEGEPNLVE-----FVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A+A G GM GQ +D+ E + ++ +KK G + + S + G L A +I+
Sbjct: 141 AKAAGVDGMIGGQVVDILSEDKSITLDELYYMHKKKTGALIKASILAGAILGSATYTDIE 200
Query: 240 SLRRYGRAVGVLYQVVDDILEAKA-------QTPRDEEKKKKKGKSYVAFYGVEKAMEVA 292
L YG +G+ +Q+ DDIL+ + +T DE+ K ++V YG+EK E+
Sbjct: 201 LLGEYGDNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHK---TTFVKVYGIEKCNELC 257
Query: 293 EELRAKAKEELDRFKKYGDNVLPLYSFI 320
E+ K + L++ KK D + + F+
Sbjct: 258 TEMTNKCFDILNKIKKNTDKLKEITMFL 285
>gi|138895964|ref|YP_001126417.1| farnesyl diphosphate synthase [Geobacillus thermodenitrificans
NG80-2]
gi|196248855|ref|ZP_03147555.1| Polyprenyl synthetase [Geobacillus sp. G11MC16]
gi|134267477|gb|ABO67672.1| Farnesyl diphosphate synthase [Geobacillus thermodenitrificans
NG80-2]
gi|196211731|gb|EDY06490.1| Polyprenyl synthetase [Geobacillus sp. G11MC16]
Length = 297
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/236 (38%), Positives = 134/236 (56%), Gaps = 16/236 (6%)
Query: 50 ITEIDQNLEKAIT-----VKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAA 104
+ E Q +E A++ + PE + ++M YS L G KR P++ ++ + G N
Sbjct: 10 LNEQKQAVEAALSRYIAQLHGPETLKKAMAYS-LEAGGKRIRPLLLLSTIQALGQNPSLG 68
Query: 105 FPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIV 164
P ACA+EM+H SLIHDDLP MD+D RRG+P+NH V+G +AILAGD L FQ ++
Sbjct: 69 LPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQ-LI 127
Query: 165 SHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEM 219
+ VP L++IAE+A+A G GM AGQ D+EGE +E++ K G+M
Sbjct: 128 AEIHDERVPVDVRLQLIAELAKAAGPEGMVAGQVADMEGEGKTLALAELEYIHRHKTGKM 187
Query: 220 SECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKK 275
+ S G L GAD +++ L + +G+ +Q+ DDIL+ + EEK K+
Sbjct: 188 LQYSVHAGALLGGADARQMRELNEFAAHLGLAFQIRDDILDIEGT----EEKIGKR 239
>gi|385799804|ref|YP_005836208.1| polyprenyl synthetase [Halanaerobium praevalens DSM 2228]
gi|309389168|gb|ADO77048.1| Polyprenyl synthetase [Halanaerobium praevalens DSM 2228]
Length = 293
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/265 (38%), Positives = 145/265 (54%), Gaps = 20/265 (7%)
Query: 68 QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCM 127
Q+ +SM+Y++L+ G KR P++ + EL N AA ALEM+H+ SLIHDDLP M
Sbjct: 32 QLTKSMKYTLLS-GGKRIRPILTLLIAELLEGNYQAALKAGSALEMIHSYSLIHDDLPAM 90
Query: 128 DDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARA 187
DDD RRG+ +NH V+G AILAGD L FQ + L P+ +V ++IA A+
Sbjct: 91 DDDKLRRGKKTNHLVFGEATAILAGDGLLTYAFQVLAD---LELKPDLKV-KIIANTAKF 146
Query: 188 VGSTGMAAGQFLDLEGEP---NLVEF--VQEKKFGEMSECSAVCGGFLAGADDDEIQSLR 242
G GM GQ LDLE E L E V + K G + + S + G + + +E ++L
Sbjct: 147 SGYQGMVGGQVLDLEAENKDLTLQEMQKVHQAKTGALIKASVLNGVYCSDFKPEEKKALL 206
Query: 243 RYGRAVGVLYQVVDDILEAKAQTP-------RDEEKKKKKGKSYVAFYGVEKAMEVAEEL 295
Y +GVL+Q+VDD+L+ +T RD+E K +Y G++KA + AE+
Sbjct: 207 TYAEKIGVLFQIVDDLLDLTGETEAMGKVVGRDQELNK---ATYPKLLGLKKAQKEAEKY 263
Query: 296 RAKAKEELDRFKKYGDNVLPLYSFI 320
+AKE L F K + + L FI
Sbjct: 264 AKEAKEALIIFGKKAEKLEALIDFI 288
>gi|163857373|ref|YP_001631671.1| geranyltranstransferase [Bordetella petrii DSM 12804]
gi|163261101|emb|CAP43403.1| probable geranyltranstransferase [Bordetella petrii]
Length = 303
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/272 (37%), Positives = 145/272 (53%), Gaps = 24/272 (8%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAF------PTACALEMVHAASL 119
P +++E+MRY+VL G KR + AA + VN A A A+E++HA SL
Sbjct: 34 PARLHEAMRYAVLGGG-KRIRAALVYAAGQACPVNGSAVAIQASMDRAAAAVELIHAYSL 92
Query: 120 IHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLR 179
IHDDLPCMDDD RRG+P+ H + A+LAGDAL PL F+ +++ P + V++
Sbjct: 93 IHDDLPCMDDDTLRRGRPTTHVQFDEATAMLAGDALQPLAFE-LLADMP---IAPALVVQ 148
Query: 180 VIAEIARAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAGAD 234
+ARA GS GMA GQ +DL + ++ + K G M CS GG ++GA
Sbjct: 149 ATQALARAAGSLGMAGGQAIDLHSVGQALSRDELQTMHSMKTGAMLACSVALGGIVSGAS 208
Query: 235 DDEIQSLRRYGRAVGVLYQVVDDILEAKA------QTPRDEEKKKKKGKSYVAFYGVEKA 288
Q+L Y +AVG+ +QVVDDIL+ A +TP + K +YV+ G++ A
Sbjct: 209 SSTRQALDDYAQAVGLAFQVVDDILDVTADSASLGKTPGKDAAGNK--PTYVSLLGLDDA 266
Query: 289 MEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+AEELR A L G + L +I
Sbjct: 267 RALAEELRGAAHAALTPLGDAGSTLARLADYI 298
>gi|375085374|ref|ZP_09732017.1| hypothetical protein HMPREF9454_00628 [Megamonas funiformis YIT
11815]
gi|374567392|gb|EHR38611.1| hypothetical protein HMPREF9454_00628 [Megamonas funiformis YIT
11815]
Length = 292
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 161/298 (54%), Gaps = 20/298 (6%)
Query: 42 LKTYWTTLITEIDQNLEKAIT--VKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
+K+Y + I+Q L + T + + + ++M YS++A G KR P++ +AA + GV
Sbjct: 2 MKSYMQRKMDLINQQLNEIYTENMALNKDLAKAMNYSLMA-GGKRLRPILIMAAADALGV 60
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+ + ++E +H SLIHDDLP MD+D RRG+ +NH V+G +AILAGDAL +
Sbjct: 61 DGEKFLRLSTSIEFIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGEALAILAGDALLTMA 120
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEM 219
F+ I T ++ E +V ++I E+++A G+ GM GQ +D++ E ++ K+
Sbjct: 121 FEIIA--TDKNVDAETKV-KIITEMSKAAGAEGMVGGQVIDMQSENKKIDIQTLKQMHAA 177
Query: 220 SE----CSAV-CGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL-----EAKAQTPRDE 269
C+A+ G LAGAD+ ++ +L Y R G+ +Q+ DD+L E P
Sbjct: 178 KTGALFCAAIRSGAILAGADEKQLANLTEYARQFGLAFQITDDVLDVVGDEKTIGKPVGS 237
Query: 270 EKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
++K K +YV +E A +A+E KAK L F G+N L + +DY R
Sbjct: 238 DEKNHK-STYVTLGSLESAKALAQEAVDKAKASLVDF---GENAEFLRALVDYLITRN 291
>gi|427405648|ref|ZP_18895853.1| hypothetical protein HMPREF9161_00213 [Selenomonas sp. F0473]
gi|425708489|gb|EKU71528.1| hypothetical protein HMPREF9161_00213 [Selenomonas sp. F0473]
Length = 291
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/298 (35%), Positives = 153/298 (51%), Gaps = 20/298 (6%)
Query: 42 LKTYWTTLITEIDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
+K W +D+ LE + T ++ SM YS++A G KR P++ +AA + G
Sbjct: 1 MKDLWRDRRVLVDRALEAELDHTDVLDRKLRASMAYSLMAGG-KRLRPILLMAAADAVGA 59
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+ + ACALEM+H SLIHDDLP MD+D RRG+ +NH +YG IAILAGDAL L
Sbjct: 60 DGMKFITAACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKIYGDGIAILAGDALLTLA 119
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----VQEK 214
F I+ VP R LRV+ EI+RA G+ GM GQ LDLE E + +
Sbjct: 120 FTVILRQRG---VPVDRHLRVVDEISRAAGAEGMVGGQVLDLEAENRRISLEELRRIHMG 176
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDE 269
K G + + G LAGA ++++ +L Y G+ +Q+ DDIL+ P
Sbjct: 177 KTGALFRAALRSGAVLAGASEEQLAALTAYADHFGLAFQITDDILDVVGNAEDIGKPVGS 236
Query: 270 EKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
++K +K +YV + +A E+A+ A LD F G+ L + Y R+
Sbjct: 237 DEKNRK-STYVTLTSLREARELAQRTADDAVAALDIF---GEEAAFLRELVTYLVHRK 290
>gi|404493293|ref|YP_006717399.1| trans-isoprenyl diphosphate synthase [Pelobacter carbinolicus DSM
2380]
gi|77545350|gb|ABA88912.1| trans-isoprenyl diphosphate synthase [Pelobacter carbinolicus DSM
2380]
Length = 296
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/300 (37%), Positives = 159/300 (53%), Gaps = 15/300 (5%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVK--YPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
DL Y ++D+ L+ + + P ++++MRYS A G KR P++ +AACE
Sbjct: 1 MDLNAYLKERRAQVDKALDTYLPGEDVLPISLHKAMRYSTFAAG-KRIRPILMMAACEAV 59
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G P ACA+EM+H SLIHDDLP MDDD RRG+P+ H VYG +AILAGDAL
Sbjct: 60 GGTVDKVMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTCHKVYGDALAILAGDALLT 119
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN-----LVEFVQ 212
F + V RV A+IAR GS GM GQ +D++ E +E++
Sbjct: 120 EAFILLSRLGEDGGVSLEAARRVSADIARCAGSMGMVGGQVVDMDSEGKEIDLATLEYIH 179
Query: 213 EKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP---RDE 269
+K G + S G L GA +++ +L RY +A G+ +QV DDIL+ +D
Sbjct: 180 TRKTGALILASVQSGAVLGGASSEQVDNLGRYAKAAGLAFQVADDILDIVGDQELLGKDV 239
Query: 270 EKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
+++GK +Y A G++ A + A+ELR A E L F + + PL S Y DR F
Sbjct: 240 GSDQERGKATYPALLGLDAARDRAKELRDVALESLSGFDERAE---PLRSIAHYIVDRSF 296
>gi|119897490|ref|YP_932703.1| geranyltranstransferase [Azoarcus sp. BH72]
gi|119669903|emb|CAL93816.1| Geranyltranstransferase [Azoarcus sp. BH72]
Length = 300
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 147/264 (55%), Gaps = 12/264 (4%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
PE+++E+MRY+VL G KR P++ AA + G ACA+E++HA SL+HDD+P
Sbjct: 35 PERLHEAMRYAVLGGG-KRVRPLLVHAAGAIGGAQPERLDRIACAVELIHAYSLVHDDMP 93
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GDAL L FQ +++ P +P R L +I +A
Sbjct: 94 CMDDDVLRRGKPTVHVEYDDATALLVGDALQTLAFQ-VLASAPVTDMPT-RQLGMIGLLA 151
Query: 186 RAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
A GS GMA GQ +DL + +EF+ K G + CS + G D + ++
Sbjct: 152 MASGSRGMAGGQAIDLAAVGRQLDLRELEFMHIHKTGALIRCSVLLGAQAGTVDGETLER 211
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK----SYVAFYGVEKAMEVAEELR 296
L RY + G+L+QVVDDIL+A+A T + K +YV+ GV A +A+++
Sbjct: 212 LDRYAKLTGLLFQVVDDILDAEADTATLGKTAGKDADHDKPTYVSLLGVADARRLAQDML 271
Query: 297 AKAKEELDRFKKYGDNVLPLYSFI 320
A+A L+ ++ L ++I
Sbjct: 272 AEALAALEPLGARAGHLAALANYI 295
>gi|392407205|ref|YP_006443813.1| geranylgeranyl pyrophosphate synthase [Anaerobaculum mobile DSM
13181]
gi|390620341|gb|AFM21488.1| geranylgeranyl pyrophosphate synthase [Anaerobaculum mobile DSM
13181]
Length = 299
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/247 (37%), Positives = 137/247 (55%), Gaps = 10/247 (4%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
PE++ + + YS+L G KR P +C+ E G+ + P A A EM H ASLIHDDLP
Sbjct: 32 PERLAQCIAYSLL-NGGKRVRPALCMILSERLGIMQDKVMPLAAAFEMAHTASLIHDDLP 90
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMD+D RRG+ +NH VYG +A+LAGDAL F+H + P + +L + A
Sbjct: 91 CMDNDDYRRGKLTNHKVYGEAMAVLAGDALLVFAFEHALQELPKQGFDKTNILNALGIFA 150
Query: 186 RAVGSTGMAAGQFLDL-----EGEPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
A+G G+ GQ LD+ + E N V + E+K + + LAGAD+ +
Sbjct: 151 NALGPAGICGGQTLDMMQDAVKDEENYVWDMCERKTATLLRATLTAPAALAGADEKIMSH 210
Query: 241 LRRYGRAVGVLYQVVDDILEAKA---QTPRDEEKKKKKGK-SYVAFYGVEKAMEVAEELR 296
L YG +G+ +Q+VDDIL+ + + K K GK ++V YG+++A ++AEE
Sbjct: 211 LYNYGTHLGISFQIVDDILDVTGSVQELGKTPGKDVKSGKLTFVTVYGLQRAKKLAEEET 270
Query: 297 AKAKEEL 303
+KA E +
Sbjct: 271 SKAIEAI 277
>gi|395760864|ref|ZP_10441533.1| geranyltranstransferase [Janthinobacterium lividum PAMC 25724]
Length = 294
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 158/298 (53%), Gaps = 23/298 (7%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNR 101
++T + + +DQ L V P +++ +MRY++L G KR P++ +AA ELF ++
Sbjct: 7 MQTTQSGVEGRLDQFLPAPDVV--PHKLHAAMRYALLGGG-KRVRPLLVMAAGELFDADQ 63
Query: 102 IAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQ 161
ACALEM+H SL+HDD+PCMDDD RRG+P+ H Y A+L GDAL F
Sbjct: 64 DTLARAACALEMIHVYSLVHDDMPCMDDDALRRGKPTVHIAYDEATALLVGDALQSQAFM 123
Query: 162 HIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE------PNLVEFVQEKK 215
+V T +P R + ++ +A A GS GM GQ +DL+ P L E + + K
Sbjct: 124 LLVDGTA---IPPARQMAMLKLLAHASGSFGMCGGQAIDLDSVGLALTLPQL-EQMHQLK 179
Query: 216 FGEMSECSAVCGGFLAGAD--DDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
G + +AV G LAG D DE+ +L Y RAVG+ +QVVDD+L+A A + +
Sbjct: 180 TGALLR-AAVMLGALAGKDLTSDEVTALNAYARAVGLAFQVVDDVLDATADSATLGKTAG 238
Query: 274 KKGK----SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
K +YV+ G+E + +AE+LR A L F GD L D R+
Sbjct: 239 KDAAANKPTYVSILGLEPSRALAEKLRCDAHAALAPF---GDKARRLRELADLVVQRK 293
>gi|225018823|ref|ZP_03708015.1| hypothetical protein CLOSTMETH_02773 [Clostridium methylpentosum
DSM 5476]
gi|224948383|gb|EEG29592.1| hypothetical protein CLOSTMETH_02773 [Clostridium methylpentosum
DSM 5476]
Length = 300
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/274 (36%), Positives = 154/274 (56%), Gaps = 16/274 (5%)
Query: 50 ITEIDQNLEKAITVK--YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPT 107
I +D+ LE+ + + + + ++MRYSV A G KR PV+ + C + G + A P
Sbjct: 16 IQLVDRELERLLPDEDILQKSVVDAMRYSVTAGG-KRIRPVLTLEVCRMLGGDPHKALPF 74
Query: 108 ACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHT 167
ACA+E++H+ SLIHDDLPCMDDD RRG+PS H +G A+LAGDAL L F+ SH
Sbjct: 75 ACAVELIHSYSLIHDDLPCMDDDAMRRGKPSCHIAFGESTALLAGDALLTLAFE-TASHA 133
Query: 168 P-PHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----VQEKKFGEMSE 221
P H LR I+ ++R G GM GQ +DLE E +E+ + K G + +
Sbjct: 134 PQTHGTGCEETLRAISILSRLAGVHGMIGGQVIDLESEGRGIEYPVLHQMHLLKTGALIK 193
Query: 222 CSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL-----EAKAQTPRDEEKKKKKG 276
+ G AGA ++++ + Y A+G+ +Q+ DDIL EA+ P +K+++K
Sbjct: 194 AACQMGAAAAGAQEEDLDKIGEYADALGLAFQICDDILDVVGDEAQLGKPVGSDKQQQK- 252
Query: 277 KSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYG 310
S++ +G+E++ A+ + AKE L F+ G
Sbjct: 253 TSFITLFGLEESRSNAQMMTTLAKESLASFEHNG 286
>gi|56477949|ref|YP_159538.1| polyprenyl synthetase [Aromatoleum aromaticum EbN1]
gi|56313992|emb|CAI08637.1| Polyprenyl synthetase (EC 2.5.1.10),gene: ISPA OR NE1160
[Aromatoleum aromaticum EbN1]
Length = 298
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 147/272 (54%), Gaps = 27/272 (9%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P +++E+MRY+VL G KR P++ AA L G ACA+E++HA SL+HDDLP
Sbjct: 32 PARLHEAMRYAVLGGG-KRIRPLLVHAAGGLVGAAPERLDKVACAVELIHAYSLVHDDLP 90
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEP-RVLRVIAEI 184
CMD+D RRG+P+ H Y A+L GD+L L FQ + H L +P L +I ++
Sbjct: 91 CMDNDVLRRGKPTVHVEYDDATALLVGDSLQALAFQSLSEHP---LTEDPSEQLSMITQL 147
Query: 185 ARAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECS----AVCGGFLAGADD 235
ARA GS GMA GQ +DL +E++ K G + S A CG L D
Sbjct: 148 ARASGSRGMAGGQAIDLAAVGKQLSREELEYMHIHKTGALIRASVLLGAACGARL---DS 204
Query: 236 DEIQSLRRYGRAVGVLYQVVDDILEAKAQTP-------RDEEKKKKKGKSYVAFYGVEKA 288
D ++ L YG+ VG+L+QVVDDIL+ ++ T +D + K +YV G+ +A
Sbjct: 205 DRLERLDHYGKLVGLLFQVVDDILDTQSDTATLGKTAGKDADNNK---PTYVTLLGMTEA 261
Query: 289 MEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+AE L A A+E L F + L +FI
Sbjct: 262 RALAESLLADAREALTPFGPQAARLDELATFI 293
>gi|336234744|ref|YP_004587360.1| polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93]
gi|335361599|gb|AEH47279.1| Polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93]
Length = 297
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/269 (36%), Positives = 142/269 (52%), Gaps = 21/269 (7%)
Query: 55 QNLEKAI-----TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTAC 109
Q LE A+ + PE I +M YS L G KR P++ A FG P AC
Sbjct: 15 QRLENALPHYITRMAAPETIKRAMSYS-LEAGGKRIRPLLLFATLHSFGKEPDIGLPVAC 73
Query: 110 ALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPP 169
A+EM+H SLIHDDLP MD+D RRG+P+NH V+G +AILAGD L FQ I
Sbjct: 74 AIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQVIAEADDA 133
Query: 170 HLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN-----LVEFVQEKKFGEMSECSA 224
+ P ++ R+I E+A+A G GM AGQ D+E E +E++ K G+M + S
Sbjct: 134 RISPMTKI-RLIEELAKAAGPEGMVAGQVADIESEGKQLSLEQLEYIHRHKTGKMLQYSV 192
Query: 225 VCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA-------QTPRDEEKKKKKGK 277
+ G LA A++++++ L + +G+ +Q+ DDIL+ + + D E KK
Sbjct: 193 LAGALLADANNEQLRQLDLFASHLGLAFQIRDDILDIEGLEEKMGKRVGSDIENKKVTYP 252
Query: 278 SYVAFYGVEKAM--EVAEELRAKAKEELD 304
S + G ++ + +AE R K E+D
Sbjct: 253 SLLTIAGAKEKLSFHIAEAKRYLQKAEID 281
>gi|71908673|ref|YP_286260.1| farnesyl-diphosphate synthase [Dechloromonas aromatica RCB]
gi|71848294|gb|AAZ47790.1| farnesyl-diphosphate synthase [Dechloromonas aromatica RCB]
Length = 297
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/278 (39%), Positives = 153/278 (55%), Gaps = 27/278 (9%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P +++E+MRY+ L G KR P++ AA EL G A CA+EM+HA SL+HDDLP
Sbjct: 32 PARLHEAMRYATLGGG-KRVRPLLAHAAGELTGATPEALDIVGCAVEMIHAYSLVHDDLP 90
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPR-VLRVIAEI 184
CMDDD RRG+P+ H + A+L GD+L + F+ + S + EP+ L +IA +
Sbjct: 91 CMDDDVLRRGRPTCHVEFDEPTALLVGDSLQTMAFELLASQP----LGEPKQQLEIIALL 146
Query: 185 ARAVGSTGMAAGQFLDLE--GEPNL---VEFVQEKKFGEMSECSAVCGGFLAGA--DDDE 237
A A GS GMA GQ +DL G+P +E + K G + +AV G LAG DE
Sbjct: 147 AHASGSRGMAGGQAIDLASVGKPLTQPELELMHALKTGALIR-AAVLLGALAGQPLSADE 205
Query: 238 IQSLRRYGRAVGVLYQVVDDILEAKAQTP-------RDEEKKKKKGKSYVAFYGVEKAME 290
SL R+ + G+L+QVVDDIL+ A T +DE K +YVA G++ A
Sbjct: 206 RTSLDRFAKRAGLLFQVVDDILDCTASTATLGKTAGKDEAADK---PTYVALLGLDAART 262
Query: 291 VAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
A+ELRA A++ L F G+ L D+ R+F
Sbjct: 263 YADELRADARDALSIF---GERASRLNQLADFICHRQF 297
>gi|251773174|gb|EES53727.1| Geranyltranstransferase [Leptospirillum ferrodiazotrophum]
Length = 297
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/273 (37%), Positives = 152/273 (55%), Gaps = 11/273 (4%)
Query: 57 LEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHA 116
E+ ++ +Y ++ E +RYS+LA G KR PV+ +AA E G + + P LE+VH
Sbjct: 22 FERELSREYG-RLAEGIRYSLLA-GGKRIRPVLALAAIEAVGGDGESLLPLTLPLELVHT 79
Query: 117 ASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPR 176
SL+HDDLP MD+D RRG+P+NH VYG AILAGDAL F + ++P R
Sbjct: 80 YSLVHDDLPAMDNDDLRRGRPTNHVVYGEAAAILAGDALLTHAFTLLSDPVYDKVLPASR 139
Query: 177 VLRVIAEIARAVGSTGMAAGQFLDLEGE-PNL----VEFVQEKKFGEMSECSAVCGGFLA 231
+ V+ E++ A G GM GQFLD+ E NL +E + K G + S GG LA
Sbjct: 140 RMEVVHELSSASGLCGMVGGQFLDIVSEGKNLTLPELENLHRHKTGALLRASVRIGGILA 199
Query: 232 GADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPR-DEEKKKKKGKS---YVAFYGVEK 287
GA + +++L RYG AVG+ +Q+ DD+L+ + +K GKS Y G+++
Sbjct: 200 GASSEWVEALTRYGEAVGIAFQIADDLLDVLGTAEELGKAAQKDAGKSKNTYPGLVGIDR 259
Query: 288 AMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
A +AEE +A E + F G+ + + S+I
Sbjct: 260 ARILAEEKCREAHEAVAVFGSKGEPLARIASYI 292
>gi|423719308|ref|ZP_17693490.1| geranyl/polyprenyl transtransferase [Geobacillus thermoglucosidans
TNO-09.020]
gi|383368211|gb|EID45486.1| geranyl/polyprenyl transtransferase [Geobacillus thermoglucosidans
TNO-09.020]
Length = 297
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/269 (36%), Positives = 142/269 (52%), Gaps = 21/269 (7%)
Query: 55 QNLEKAI-----TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTAC 109
Q LE A+ + PE I +M YS L G KR P++ A FG P AC
Sbjct: 15 QRLENALPHYITRMAAPETIKRAMSYS-LEAGGKRIRPLLLFATLHSFGKEPDIGLPVAC 73
Query: 110 ALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPP 169
A+EM+H SLIHDDLP MD+D RRG+P+NH V+G +AILAGD L FQ I
Sbjct: 74 AIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQVIAEADDA 133
Query: 170 HLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN-----LVEFVQEKKFGEMSECSA 224
+ P ++ R+I E+A+A G GM AGQ D+E E +E++ K G+M + S
Sbjct: 134 RISPMTKI-RLIEELAKAAGPEGMVAGQVADIESEGKQLSLEQLEYIHRHKTGKMLQYSV 192
Query: 225 VCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA-------QTPRDEEKKKKKGK 277
+ G LA A++++++ L + +G+ +Q+ DDIL+ + + D E KK
Sbjct: 193 LAGALLADANNEQLRHLDLFASHLGLAFQIRDDILDIEGLEEKMGKRVGSDIENKKVTYP 252
Query: 278 SYVAFYGVEKAM--EVAEELRAKAKEELD 304
S + G ++ + +AE R K E+D
Sbjct: 253 SLLTIAGAKEKLSFHIAEAKRYLQKAEID 281
>gi|33600896|ref|NP_888456.1| geranyltranstransferase [Bordetella bronchiseptica RB50]
gi|33568496|emb|CAE32408.1| probable geranyltranstransferase [Bordetella bronchiseptica RB50]
Length = 303
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/270 (37%), Positives = 148/270 (54%), Gaps = 20/270 (7%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVN--RIAAFPT----ACALEMVHAASL 119
P +++E+MRY+VL G KR + AA + VN +A + A A+E++HA SL
Sbjct: 34 PSRLHEAMRYAVLGGG-KRVRAALVYAAGQACPVNGSTLAVGASMDRAAAAVELIHAYSL 92
Query: 120 IHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLR 179
+HDDLPCMDDD RRG+P+ H + A+LAGDAL PL F+ +++ P + V++
Sbjct: 93 VHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGDALQPLAFE-LLAGMP---IAPALVVQ 148
Query: 180 VIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCGGFLAGAD 234
+ARA GS GMA GQ +DL + ++ + K G M CS GG +AGA
Sbjct: 149 AAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQTMHSMKTGAMLACSVTLGGIVAGAS 208
Query: 235 DDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK----SYVAFYGVEKAME 290
Q+L Y +A+G+ +QVVDDIL+ A T + K +YV+ G+++A
Sbjct: 209 STARQALDSYAQAIGLAFQVVDDILDVTADTASLGKTAGKDAADNKPTYVSLLGLDQARA 268
Query: 291 VAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+A+ELR A + L + G + L FI
Sbjct: 269 LAQELRQAAHQALAPLGESGARLGQLADFI 298
>gi|224369661|ref|YP_002603825.1| putative polyprenyl synthetase [Desulfobacterium autotrophicum
HRM2]
gi|223692378|gb|ACN15661.1| putative polyprenyl synthetase [Desulfobacterium autotrophicum
HRM2]
Length = 316
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 112/313 (35%), Positives = 164/313 (52%), Gaps = 28/313 (8%)
Query: 36 RST--QFDLKTYWTTLITEIDQNLEKAITVKYPE-QIYESMRYSVLAKGTKRAPPVMCVA 92
RST FD K Y T +++ L + P ++ +M +S++A G KR P++C+A
Sbjct: 10 RSTMDNFDFKAYLKARQTLVNERLGAILGSLDPRRELTCAMGHSLMAGG-KRLRPILCLA 68
Query: 93 ACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAG 152
ACE A P ACALEM+H SL+HDDLP MD+D RRG P+ H +G AILAG
Sbjct: 69 ACEACSAPLEPALPAACALEMIHTYSLVHDDLPAMDNDDLRRGIPTCHRAFGESTAILAG 128
Query: 153 DALFPLGFQHIVSHTPPHL---VPEPRV-LRVIAEIARAVGSTGMAAGQFLDLEGEP--- 205
D L FQ I+S P +L P+P V L ++A I+ A G GM GQ LD+ +
Sbjct: 129 DGLLTHAFQ-ILSR-PENLFKVFPDPGVRLELVAIISDAAGINGMVEGQMLDMLLQNADE 186
Query: 206 -----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILE 260
L+ + K G M S V G AGAD+ I+SL Y +G+ +Q+VDDIL+
Sbjct: 187 TVTSLELLTQIHTLKTGGMIRASVVAGAVSAGADNAMIESLAVYAEKIGLAFQIVDDILD 246
Query: 261 AK------AQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVL 314
+ +T + +K ++ +F G+E + + A+E+ +A + LD F + L
Sbjct: 247 VEGDPTVMGKTAGSDVDNRK--MTFPSFMGLEASRKYAQEIINEAVKALDLFDE--KKTL 302
Query: 315 PLYSFIDYAADRE 327
PL + Y R+
Sbjct: 303 PLKAIAAYILQRK 315
>gi|94264970|ref|ZP_01288741.1| Polyprenyl synthetase [delta proteobacterium MLMS-1]
gi|93454573|gb|EAT04851.1| Polyprenyl synthetase [delta proteobacterium MLMS-1]
Length = 315
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/299 (34%), Positives = 152/299 (50%), Gaps = 12/299 (4%)
Query: 33 SQLRSTQFDLKTYWTTLITEIDQNLEKAITVK-YPEQIY-ESMRYSVLAKGTKRAPPVMC 90
++ + T D+K Y ++ LE+ + + P + E+MRYS+LA G KR P++C
Sbjct: 13 TRAKVTTLDIKQYLAAQRELVEAALEQLLPAEDGPLAAHIEAMRYSLLAGG-KRVRPILC 71
Query: 91 VAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAIL 150
+AA E G + P A ALE +H SLIHDDLP MD+D RRG P++H +G AIL
Sbjct: 72 LAAAEAVGSDPKPLLPVAGALECIHTYSLIHDDLPAMDNDDLRRGMPTSHKKFGEAAAIL 131
Query: 151 AGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF 210
AGD L F+ + H LR++A +A AVG GM GQ LD+E E +E
Sbjct: 132 AGDGLLSFAFELLARPLGEHGPGPAAQLRLLATVAAAVGPRGMVGGQVLDIEAEGRRLEL 191
Query: 211 -----VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT 265
+ K G + + G GA + ++Q+L RYG+ G+ +Q+VDD+L + T
Sbjct: 192 DELQQIHRHKTGALITAAVQAGAIGGGASETQLQALTRYGQQTGLAFQIVDDLLNVTSDT 251
Query: 266 P---RDEEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+ +GK +Y A G+E + A E A A L+ F + + L +I
Sbjct: 252 ATLGKAAGSDAARGKATYPALLGLEATEDKAREAVAAAVAALESFDHRAEPLRELARYI 310
>gi|410722794|ref|ZP_11362047.1| geranylgeranyl pyrophosphate synthase [Clostridium sp. Maddingley
MBC34-26]
gi|410603790|gb|EKQ58216.1| geranylgeranyl pyrophosphate synthase [Clostridium sp. Maddingley
MBC34-26]
Length = 289
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 143/263 (54%), Gaps = 21/263 (7%)
Query: 47 TTLITEIDQNLEKAITVK--YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAA 104
+ L +I+ LE K Y IY+S YS L G KR P++ + +
Sbjct: 4 SNLKKDINDYLENYFKEKGTYNRIIYDSCSYS-LNIGGKRTRPILLALTYYSYKEDYKKV 62
Query: 105 FPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIV 164
P A A+EM+H SLIHDDLPCMD+D RRGQP+NH + +IA+LAGDAL ++
Sbjct: 63 MPMAAAIEMIHTYSLIHDDLPCMDNDDLRRGQPTNHIKFNENIAVLAGDALLNEAMIIMM 122
Query: 165 SHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE-----PNLVEFVQEKKFGEM 219
+++ L+ L+ EIA A G+ GM GQ +D+ E + +E++ KK GE+
Sbjct: 123 NYS---LLNRENSLKAAYEIAVAAGAEGMIGGQVVDISSEGKEISKDQLEYMHSKKTGEL 179
Query: 220 SECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA-------QTPRDEEKK 272
+ + + GG LA A +++I++L YG +G+ +Q+ DDIL+ T DE
Sbjct: 180 IKAAVLAGGILANAPENDIKALEEYGNKLGLAFQIKDDILDVIGDSVKLGKNTHADEANN 239
Query: 273 KKKGKSYVAFYGVEKAMEVAEEL 295
K ++++ YG+EK ME+ + L
Sbjct: 240 K---TNFISVYGLEKCMELCKTL 259
>gi|410472460|ref|YP_006895741.1| geranyltranstransferase [Bordetella parapertussis Bpp5]
gi|412338917|ref|YP_006967672.1| geranyltranstransferase [Bordetella bronchiseptica 253]
gi|427815400|ref|ZP_18982464.1| probable geranyltranstransferase [Bordetella bronchiseptica 1289]
gi|408442570|emb|CCJ49121.1| probable geranyltranstransferase [Bordetella parapertussis Bpp5]
gi|408768751|emb|CCJ53521.1| probable geranyltranstransferase [Bordetella bronchiseptica 253]
gi|410566400|emb|CCN23961.1| probable geranyltranstransferase [Bordetella bronchiseptica 1289]
Length = 303
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/270 (37%), Positives = 148/270 (54%), Gaps = 20/270 (7%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVN--RIAAFPT----ACALEMVHAASL 119
P +++E+MRY+VL G KR + AA + VN +A + A A+E++HA SL
Sbjct: 34 PTRLHEAMRYAVLGGG-KRVRAALVYAAGQACPVNGSTLAVGASMDRAAAAVELIHAYSL 92
Query: 120 IHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLR 179
+HDDLPCMDDD RRG+P+ H + A+LAGDAL PL F+ +++ P + V++
Sbjct: 93 VHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGDALQPLAFE-LLAGMP---IAPALVVQ 148
Query: 180 VIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCGGFLAGAD 234
+ARA GS GMA GQ +DL + ++ + K G M CS GG +AGA
Sbjct: 149 AAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQTMHSMKTGAMLACSVTLGGIVAGAS 208
Query: 235 DDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK----SYVAFYGVEKAME 290
Q+L Y +A+G+ +QVVDDIL+ A T + K +YV+ G+++A
Sbjct: 209 STARQALDSYAQAIGLAFQVVDDILDVTADTASLGKTAGKDAADNKPTYVSLLGLDQARA 268
Query: 291 VAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+A+ELR A + L + G + L FI
Sbjct: 269 LAQELRQAAHQALAPLGESGARLGQLADFI 298
>gi|295695407|ref|YP_003588645.1| polyprenyl synthetase [Kyrpidia tusciae DSM 2912]
gi|295411009|gb|ADG05501.1| Polyprenyl synthetase [Kyrpidia tusciae DSM 2912]
Length = 295
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 110/299 (36%), Positives = 162/299 (54%), Gaps = 20/299 (6%)
Query: 41 DLKTYWTTLITEIDQNLEKAIT-VKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
+L+ +W +D L+ I K +++E+MRYS+ A G KR P++ +AACE G
Sbjct: 4 ELREFWEAGARAVDDALDALIPPGKGAGRLHEAMRYSLFA-GGKRLRPLLAMAACEGAGG 62
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+ A P ACALE+VH SLIHDDLP MDDD RRG+P+NH V+G +A+LAGDAL L
Sbjct: 63 SLREALPAACALELVHTYSLIHDDLPAMDDDDYRRGRPTNHRVFGEAMAVLAGDALLTLA 122
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG-------EPNLVEFVQ 212
F +++ P +P +R++ E+A A G GM GQ LD+E +P L+ +
Sbjct: 123 FG-VLAKAP---LPATTRIRLVDELAEASGKDGMVGGQALDIEATGADGQPDPELLRDLH 178
Query: 213 EKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKK 272
KK G + S GG AGAD+ + L YG+AVG+ YQ+VDD+L+ R +
Sbjct: 179 RKKTGALIIASLRMGGLCAGADESLLDRLSAYGQAVGLAYQIVDDLLDVGGDARRIGKAV 238
Query: 273 KKKGK----SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+ ++ YGV+++ E++R KE + + L Y ADR+
Sbjct: 239 GRDAALNKLTWPGVYGVDRSR---EDVRRLTKEAIAHLHGLPGDTRHLADLARYLADRD 294
>gi|168180471|ref|ZP_02615135.1| geranyltranstransferase [Clostridium botulinum NCTC 2916]
gi|182668864|gb|EDT80842.1| geranyltranstransferase [Clostridium botulinum NCTC 2916]
Length = 290
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/268 (34%), Positives = 145/268 (54%), Gaps = 19/268 (7%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
Y ++IYE+M YS+ A G KR PV+ + L+ + A P A A+EM+H SLIHDDL
Sbjct: 25 YDKKIYEAMAYSLEA-GGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDL 83
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MD+D RRG+P+NH ++G IAILAGDAL + ++ L + ++ I
Sbjct: 84 PAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYS---LKNGEKAVKACYTI 140
Query: 185 ARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A+A G GM GQ +D+ E + ++ +KK G + + S + G L A +I+
Sbjct: 141 AKAAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKKTGALIKASILAGAILGSATYTDIE 200
Query: 240 SLRRYGRAVGVLYQVVDDILEAKA-------QTPRDEEKKKKKGKSYVAFYGVEKAMEVA 292
L YG +G+ +Q+ DDIL+ + +T DE+ K ++V YG+EK E+
Sbjct: 201 LLGEYGDNLGLAFQIKDDILDVEGDTTTLGKETKSDEDNHK---TTFVKVYGIEKCNELC 257
Query: 293 EELRAKAKEELDRFKKYGDNVLPLYSFI 320
E+ K + L++ KK D + + F+
Sbjct: 258 TEMTNKCFDILNKIKKNTDKLKEITMFL 285
>gi|226949181|ref|YP_002804272.1| geranyltranstransferase [Clostridium botulinum A2 str. Kyoto]
gi|226842010|gb|ACO84676.1| geranyltranstransferase [Clostridium botulinum A2 str. Kyoto]
Length = 290
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/268 (34%), Positives = 145/268 (54%), Gaps = 19/268 (7%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
Y ++IYE+M YS+ A G KR PV+ + L+ + A P A A+EM+H SLIHDDL
Sbjct: 25 YDKKIYEAMAYSLEA-GGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDL 83
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MD+D RRG+P+NH ++G IAILAGDAL + ++ L + ++ I
Sbjct: 84 PAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYS---LKNGEKAVKACYTI 140
Query: 185 ARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A+A G GM GQ +D+ E + ++ +KK G + + S + G L A +I+
Sbjct: 141 AKAAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKKTGALIKASILAGAILGSATYTDIE 200
Query: 240 SLRRYGRAVGVLYQVVDDILEAKA-------QTPRDEEKKKKKGKSYVAFYGVEKAMEVA 292
L YG +G+ +Q+ DDIL+ + +T DE+ K ++V YG+EK E+
Sbjct: 201 LLGEYGDNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHK---TTFVKVYGIEKCNELC 257
Query: 293 EELRAKAKEELDRFKKYGDNVLPLYSFI 320
E+ K + L++ KK D + + F+
Sbjct: 258 TEMTNKCFDILNKIKKNTDKLKEITMFL 285
>gi|257865770|ref|ZP_05645423.1| geranyltranstransferase [Enterococcus casseliflavus EC30]
gi|257872105|ref|ZP_05651758.1| geranyltranstransferase [Enterococcus casseliflavus EC10]
gi|257799704|gb|EEV28756.1| geranyltranstransferase [Enterococcus casseliflavus EC30]
gi|257806269|gb|EEV35091.1| geranyltranstransferase [Enterococcus casseliflavus EC10]
Length = 295
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 94/257 (36%), Positives = 144/257 (56%), Gaps = 23/257 (8%)
Query: 68 QIYESMRYSVLAKGTKRAPPVMCVAACELFG--VNRIAAFPTACALEMVHAASLIHDDLP 125
+++ESM+YS+ A G KR P++ A F +N A + A ALEMVH SLIHDDLP
Sbjct: 28 RLFESMQYSIQAGG-KRIRPLLLAATVAAFHKPIN-TAVYQCAAALEMVHTYSLIHDDLP 85
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
MD+D RRG+P+NH V+G +AILAGD L FQ + + +VL ++ +++
Sbjct: 86 AMDNDDLRRGKPTNHKVFGEALAILAGDGLLTAAFQLVAM---AEIEANQKVL-LLQQLS 141
Query: 186 RAVGSTGMAAGQFLDLEGEPNLVEF-----VQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G+ GM AGQ D++GE + + E+K GE+ + + GG LA ++ +
Sbjct: 142 KAAGTQGMVAGQAADIQGENQALRLEELMSIHERKTGELIRFAVIAGGVLADQTEEVLHE 201
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTP-------RDEEKKKKKGKSYVAFYGVEKAMEVAE 293
L R+ + +G+ +Q+ DD+L+A + T RD+E K +Y A G+ A +
Sbjct: 202 LDRFAQHIGLAFQIRDDLLDATSTTEELGKVVRRDDELAK---STYPALLGLAGAQQALT 258
Query: 294 ELRAKAKEELDRFKKYG 310
E KAKE L + +YG
Sbjct: 259 EELGKAKEILAQLSQYG 275
>gi|254442247|ref|ZP_05055723.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium
DG1235]
gi|198256555|gb|EDY80863.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium
DG1235]
Length = 292
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 148/271 (54%), Gaps = 24/271 (8%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNR 101
L+TY + + + +DQ L T P +I+E+M YS+ A G KR PV+ +A+ ELF +
Sbjct: 7 LRTYQSEIESAVDQYLPAEAT--RPSRIHEAMLYSMRAGG-KRLRPVLVLASKELFD-SE 62
Query: 102 IAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQ 161
+ A P A A+E +H SLIHDDLP +DD RRG+P++H + A+LAGDAL FQ
Sbjct: 63 LDAMPAAIAVECLHTYSLIHDDLPSIDDGDLRRGKPTSHKQFDEATAVLAGDALLAYAFQ 122
Query: 162 HIVSHTPPHLVPEPRV-LRVIAEIARAVGSTGMAAGQFLDLEGE-----PNLVEFVQEKK 215
+ H P V ++ E+ GS + GQ D+ GE + + F+ K
Sbjct: 123 LLAR----HFANAPDVCANLVGELGETAGSERLIGGQMEDILGEGGPLSEDTLNFIHLNK 178
Query: 216 FGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP-------RD 268
+ EC V GG + GA+ ++I +LR YGR +G+ +Q++DDIL+A + D
Sbjct: 179 TSALIECCLVMGGIIGGANYEQIDALRTYGREIGIAFQIIDDILDATSDETTMGKSIGSD 238
Query: 269 EEKKKKKGKSYVAFYGVEKAMEVAEELRAKA 299
E K +YV +G+EK+ E+A + KA
Sbjct: 239 AELDK---TTYVKLHGLEKSRELAAQRTQKA 266
>gi|386041718|ref|YP_005960672.1| polyprenyl synthetase [Paenibacillus polymyxa M1]
gi|343097756|emb|CCC85965.1| polyprenyl synthetase [Paenibacillus polymyxa M1]
Length = 307
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 102/249 (40%), Positives = 145/249 (58%), Gaps = 18/249 (7%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P+ + ESM YS+ A G KR P++ +AA E FG +R AA P ACA+EMVH SLIHDDLP
Sbjct: 39 PDVLRESMNYSLTAGG-KRLRPLLVIAAAEAFGGSREAALPVACAVEMVHTYSLIHDDLP 97
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
MDDD RRG+ +NH VYG +A+LAGDAL F IV H V +L ++ +++
Sbjct: 98 AMDDDDYRRGKLTNHKVYGEAVAVLAGDALLTHAFYCIVQAGRLHGVSSDALLSIVEDLS 157
Query: 186 RAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
G+ GM GQ D+ GE + +E++ K ++ S + GG +AGAD ++++
Sbjct: 158 EMSGARGMVGGQVADMSGEQGMTGIKELEYIHLHKTADLIIFSLLAGGRIAGADKSQLEA 217
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKS--------YVAFYGVEKAMEVA 292
LR +GR +G+ +Q+ DDIL+ DE K KK +S Y F GV+ ++
Sbjct: 218 LRCFGRDLGLAFQIQDDILDLVG----DESKMGKKTQSDVEQEKVTYPYFIGVDASLRQV 273
Query: 293 EELRAKAKE 301
EEL AK+
Sbjct: 274 EELTVSAKK 282
>gi|325569748|ref|ZP_08145772.1| geranyltranstransferase [Enterococcus casseliflavus ATCC 12755]
gi|420262480|ref|ZP_14765121.1| geranyltranstransferase [Enterococcus sp. C1]
gi|325157053|gb|EGC69219.1| geranyltranstransferase [Enterococcus casseliflavus ATCC 12755]
gi|394770237|gb|EJF50041.1| geranyltranstransferase [Enterococcus sp. C1]
Length = 298
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 97/273 (35%), Positives = 152/273 (55%), Gaps = 24/273 (8%)
Query: 53 IDQNLEKAITVKYPEQ-IYESMRYSVLAKGTKRAPPVMCVAACELFG--VNRIAAFPTAC 109
I++ +E+ + +Q +++SM+YS+ A G KR P++ A F VN A + A
Sbjct: 15 IEEVMERFVKEHTSDQRLFKSMQYSIQAGG-KRIRPLLLAATVAAFHKPVN-TAVYQCAA 72
Query: 110 ALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPP 169
ALEMVH SLIHDDLP MD+D RRG+P+NH V+G +AILAGD L FQ +
Sbjct: 73 ALEMVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTAAFQLVAM---A 129
Query: 170 HLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----VQEKKFGEMSECSA 224
+ +VL ++ ++++A G+ GM AGQ D++GE + + E+K GE+ +
Sbjct: 130 EIEANQKVL-LLQQLSKAAGTQGMVAGQAADIQGENQALSLEELMSIHERKTGELIRFAV 188
Query: 225 VCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP-------RDEEKKKKKGK 277
+ GG LA ++ + L R+ + +G+ +Q+ DD+L+A + T RD+E K
Sbjct: 189 IAGGVLADQTEEVLHELDRFAQHIGLAFQIRDDLLDATSTTEELGKVVRRDDELAK---S 245
Query: 278 SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYG 310
+Y A G+ A + E KAKE L + +YG
Sbjct: 246 TYPALLGLAGAQQALTEELGKAKEILAQLSQYG 278
>gi|387818091|ref|YP_005678436.1| octaprenyl-diphosphate synthase [Clostridium botulinum H04402 065]
gi|322806133|emb|CBZ03701.1| octaprenyl-diphosphate synthase [Clostridium botulinum H04402 065]
Length = 284
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 93/268 (34%), Positives = 145/268 (54%), Gaps = 19/268 (7%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
Y ++IYE+M YS+ A G KR PV+ + L+ + A P A A+EM+H SLIHDDL
Sbjct: 19 YDKKIYEAMAYSLEA-GGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDL 77
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MD+D RRG+P+NH ++G IAILAGDAL + ++ L + ++ I
Sbjct: 78 PAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYS---LKNGEKAVKACYTI 134
Query: 185 ARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A+A G GM GQ +D+ E + ++ +KK G + + S + G L A +I+
Sbjct: 135 AKAAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKKTGALIKSSILAGAILGSATYTDIE 194
Query: 240 SLRRYGRAVGVLYQVVDDILEAKA-------QTPRDEEKKKKKGKSYVAFYGVEKAMEVA 292
L YG +G+ +Q+ DDIL+ + +T DE+ K ++V YG+EK E+
Sbjct: 195 LLGEYGDNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHK---TTFVKVYGIEKCNELC 251
Query: 293 EELRAKAKEELDRFKKYGDNVLPLYSFI 320
E+ K + L++ KK D + + F+
Sbjct: 252 TEMTNKCFDILNKIKKNTDKLKEITMFL 279
>gi|405354222|ref|ZP_11023602.1| Octaprenyl-diphosphate synthase [Chondromyces apiculatus DSM 436]
gi|397092465|gb|EJJ23223.1| Octaprenyl-diphosphate synthase [Myxococcus sp. (contaminant ex DSM
436)]
Length = 310
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 96/258 (37%), Positives = 144/258 (55%), Gaps = 18/258 (6%)
Query: 69 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMD 128
+ ++R +VLA G KR P++C+ ACE G + AA P ACA+EM+H SL+HDDLP MD
Sbjct: 45 LTAAIREAVLADG-KRLRPILCLEACEWVGGSLKAALPAACAIEMIHKMSLVHDDLPAMD 103
Query: 129 DDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAV 188
D +R G+P+ H V+G +AILAGDAL F + S VP RVL I+ + +A+
Sbjct: 104 DAETRNGRPALHKVHGEALAILAGDALLVHAFGLLAS---IRAVPAERVLGAISRLCQAL 160
Query: 189 GSTGMAAGQFLDLEGE-----PNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRR 243
G+ G+A GQ LD+ + P ++ V K E + V G + GAD ++++L R
Sbjct: 161 GTAGLAGGQALDVLSQSEDVTPEKLDHVHTWKTASFFEAAMVIGAEVGGADASQVEALAR 220
Query: 244 YGRAVGVLYQVVDDILEAKAQTPRD-EEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEE 302
YG+ +G +Q+ DD+L+A RD + + +YV +GV+ A EL +A
Sbjct: 221 YGKLLGRAFQISDDLLDA-----RDVKALAHGEATNYVQLHGVDGARRKLRELLDQAVSA 275
Query: 303 LDRFKKYGDNVLPLYSFI 320
L K+ LPL + +
Sbjct: 276 LASNKR---GALPLLAGL 290
>gi|310642662|ref|YP_003947420.1| polyprenyl synthetase [Paenibacillus polymyxa SC2]
gi|309247612|gb|ADO57179.1| Polyprenyl synthetase [Paenibacillus polymyxa SC2]
Length = 303
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 102/249 (40%), Positives = 145/249 (58%), Gaps = 18/249 (7%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P+ + ESM YS+ A G KR P++ +AA E FG +R AA P ACA+EMVH SLIHDDLP
Sbjct: 35 PDVLRESMNYSLTAGG-KRLRPLLVIAAAEAFGGSREAALPVACAVEMVHTYSLIHDDLP 93
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
MDDD RRG+ +NH VYG +A+LAGDAL F IV H V +L ++ +++
Sbjct: 94 AMDDDDYRRGKLTNHKVYGEAVAVLAGDALLTHAFYCIVQAGRLHGVSSDALLSIVEDLS 153
Query: 186 RAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
G+ GM GQ D+ GE + +E++ K ++ S + GG +AGAD ++++
Sbjct: 154 EMSGARGMVGGQVADMSGEQGMTGIKELEYIHLHKTADLIIFSLLAGGRIAGADKSQLEA 213
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKS--------YVAFYGVEKAMEVA 292
LR +GR +G+ +Q+ DDIL+ DE K KK +S Y F GV+ ++
Sbjct: 214 LRCFGRDLGLAFQIQDDILDLVG----DESKMGKKTQSDVEQEKVTYPYFIGVDASLRQV 269
Query: 293 EELRAKAKE 301
EEL AK+
Sbjct: 270 EELTVSAKK 278
>gi|433284426|emb|CCO06628.1| geranyltranstransferase [Candidatus Desulfamplus magnetomortis
BW-1]
Length = 322
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 160/318 (50%), Gaps = 35/318 (11%)
Query: 38 TQFDLKTYWTTLITEIDQNLEKAITVKYPE-QIYESMRYSVLAKGTKRAPPVMCVAACEL 96
T FDL Y +D L+K I PE ++ +++ +S++A G KR P++ +AA +
Sbjct: 11 TLFDLSAYLKEKRAILDDYLKKVIQELNPENELAKAIEHSLMA-GGKRLRPILAMAAAQA 69
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
G + A P AC++EM+H SLIHDDLP MD+D RRG P+ H + AILAGDAL
Sbjct: 70 TGKDFRLALPAACSIEMIHTYSLIHDDLPAMDNDDLRRGIPTCHKAFSEATAILAGDALL 129
Query: 157 PLGFQHIVSHTPPHLV---PEPRVL-RVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQ 212
F I++H P + P +L +++A I+RA G+ GM GQ +D++ L + Q
Sbjct: 130 THAFT-ILTHNPRAMFDPCPNDEILFKLVAMISRAAGAHGMVEGQMMDMQATGFLDQHNQ 188
Query: 213 EK----------------KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVD 256
K K G+M S G AGAD D+I+ L +Y VG+ +QV D
Sbjct: 189 SKVNIDNCLAHLKKLHELKTGKMIVVSVESGALSAGADPDQIERLAKYAGKVGLAFQVAD 248
Query: 257 DILEAKAQ-------TPRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKY 309
DIL + D K ++ A G+E + A L +A E L+ F +
Sbjct: 249 DILNVEGDPYVMGKAAGSDAMNNK---MTFPALLGLEPSRTFARNLIQEALEPLNTFNE- 304
Query: 310 GDNVLPLYSFIDYAADRE 327
++LPL + Y DR+
Sbjct: 305 -KDILPLKAIAGYIVDRK 321
>gi|170761674|ref|YP_001787211.1| geranyltranstransferase [Clostridium botulinum A3 str. Loch Maree]
gi|169408663|gb|ACA57074.1| putative geranyltranstransferase [Clostridium botulinum A3 str.
Loch Maree]
Length = 290
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/268 (34%), Positives = 143/268 (53%), Gaps = 19/268 (7%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
Y ++IYE+M YS+ A G KR PV+ + L+ + A P A A+EM+H SLIHDDL
Sbjct: 25 YDKKIYEAMIYSLEA-GGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDL 83
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MD+D RRG+P+NH ++G IAILAGDAL + ++ L L+ I
Sbjct: 84 PAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYS---LKNGEEALKACYTI 140
Query: 185 ARAVGSTGMAAGQFLDLEGEPNLVE-----FVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
+A G GM GQ +D+ E + ++ +KK G + + S + G L A +I+
Sbjct: 141 TKAAGVDGMIGGQVVDILSEDKSISLDELYYMHKKKTGALIKASILAGAILGSATYTDIE 200
Query: 240 SLRRYGRAVGVLYQVVDDILEAKA-------QTPRDEEKKKKKGKSYVAFYGVEKAMEVA 292
L YG +G+ +Q+ DDIL+ + +T DE+ K ++V YG+EK E+
Sbjct: 201 LLGEYGDNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHK---TTFVKVYGIEKCNELC 257
Query: 293 EELRAKAKEELDRFKKYGDNVLPLYSFI 320
E+ K + L++ KK D + + F+
Sbjct: 258 TEMTNKCFDILNKIKKNTDKLKEITMFL 285
>gi|304436640|ref|ZP_07396609.1| geranyltranstransferase [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304370336|gb|EFM23992.1| geranyltranstransferase [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 291
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/293 (34%), Positives = 149/293 (50%), Gaps = 17/293 (5%)
Query: 42 LKTYWTTLITEIDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
+K W +++ L+ + T + + ++M YS++A G KR PV+ +AA + G
Sbjct: 1 MKERWRARQEMVERALQAELDRTDVLDDTLRQAMAYSLMAGG-KRLRPVLLMAAADAVGG 59
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+ ACALEM+H SLIHDDLP MD+D RRG+ +NH V+G IAILAGD L L
Sbjct: 60 DGAKFLSVACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGDGIAILAGDGLLTLA 119
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----VQEK 214
F I+ V +LRV+ EI+RA G+ GM GQ LDL E + + V
Sbjct: 120 FTVILRQQD---VSADTLLRVVDEISRAAGAEGMVGGQVLDLRAEEHRISMEEMRRVHMG 176
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDE 269
K G + + G L GA + ++ SL Y G+ +Q+ DDIL+ P
Sbjct: 177 KTGALFRAALRSGAILGGASEAQLASLTTYAEQFGLAFQITDDILDVVGTAEDIGKPVGS 236
Query: 270 EKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
++K K +YV+ +++A E+A + A L F D + L S++ Y
Sbjct: 237 DEKNHK-STYVSLTSLDEAQELAAQTVKDACAALRDFGAEADFLRELVSYLVY 288
>gi|431794334|ref|YP_007221239.1| geranylgeranyl pyrophosphate synthase [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430784560|gb|AGA69843.1| geranylgeranyl pyrophosphate synthase [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 289
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/270 (38%), Positives = 149/270 (55%), Gaps = 17/270 (6%)
Query: 69 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMD 128
+ ESM YS LA G KR PV+ +AA + G + + P ACALE++H SLIHDDLP MD
Sbjct: 27 LIESMNYS-LAAGGKRIRPVLALAAAKAVGGDEESILPAACALELIHTYSLIHDDLPAMD 85
Query: 129 DDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAV 188
+D RRG+ SNH +GV AILAGDAL F+ +++ + + PE R LRVI E+A+A
Sbjct: 86 NDDYRRGRLSNHKAFGVGQAILAGDALLTYAFE-LLAQSITGVTPE-RQLRVIREVAQAA 143
Query: 189 GSTGMAAGQFLDLEGEPN-----LVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRR 243
G GM GQ LDL E +E V K G M SA G LAG +++I++L
Sbjct: 144 GPEGMVGGQVLDLAAEEKDLALAELERVHRLKTGAMLVVSARLGAILAGGTEEKIEALTN 203
Query: 244 YGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAK 298
Y +A+G+ +Q+ DDIL+ + + P + ++ K +Y + G+E A E K
Sbjct: 204 YAQAIGLAFQIRDDILDLEGDSKSLGKPAQSDIRQHKA-TYPSLMGIEGA---KAEFMNK 259
Query: 299 AKEELDRFKKYGDNVLPLYSFIDYAADREF 328
E + G+ L+ DY A R++
Sbjct: 260 TDEAHAALETLGERSGFLHDLADYIAQRKY 289
>gi|291613174|ref|YP_003523331.1| polyprenyl synthetase [Sideroxydans lithotrophicus ES-1]
gi|291583286|gb|ADE10944.1| Polyprenyl synthetase [Sideroxydans lithotrophicus ES-1]
Length = 295
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/276 (37%), Positives = 153/276 (55%), Gaps = 23/276 (8%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFG--VNRIAAFPTACALEMVHAASLIHDD 123
P++++ +MRYSVL +G KR P++ AA EL G + R+ A A+E++HA SL+HDD
Sbjct: 30 PQRLHAAMRYSVL-EGGKRVRPLLAYAAGELAGAPIERVEI--AAAAVELIHAYSLVHDD 86
Query: 124 LPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEP-RVLRVIA 182
+PCMDDD RRG+P+ H Y A+L GDAL L FQ + H L +P R L+++
Sbjct: 87 MPCMDDDVLRRGKPTCHIEYDEATALLVGDALQSLAFQLLSEH---RLSDDPSRQLQMVR 143
Query: 183 EIARAVGSTGMAAGQFLDLE------GEPNLVEFVQEKKFGEMSECSAVCGGFLAGADDD 236
+A A GS GMA GQ +DL P L E + K G + + + G D
Sbjct: 144 LLAAASGSRGMAGGQAIDLASVGKQLAMPEL-EQMHIYKTGALIRAAILLGAHCGKLDQA 202
Query: 237 EIQSLRRYGRAVGVLYQVVDDILEAKAQTP---RDEEKKKKKGK-SYVAFYGVEKAMEVA 292
++ L RYG+ +G+ +QVVDD+L+++A T + K K K +YV GV+ A +A
Sbjct: 203 QLDKLDRYGKCIGLAFQVVDDVLDSEADTATLGKTAGKDKDNDKPTYVTLLGVQAAKRMA 262
Query: 293 EELRAKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
L +E LD K++G + L+ D+ R+F
Sbjct: 263 ATLH---QEALDTLKEFGASAQRLHDLADFIVMRKF 295
>gi|149179199|ref|ZP_01857766.1| Polyprenyl synthetase [Planctomyces maris DSM 8797]
gi|148841972|gb|EDL56368.1| Polyprenyl synthetase [Planctomyces maris DSM 8797]
Length = 298
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/295 (35%), Positives = 158/295 (53%), Gaps = 27/295 (9%)
Query: 43 KTYWTTLITEIDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVN 100
K W+ L T +++ LE+A+ + P + +M YS L+ G KR P++ + +CE G +
Sbjct: 9 KEMWSNLQTLVNRQLEEALDQSGDCPPILKAAMSYS-LSAGGKRLRPILVLLSCEACGGD 67
Query: 101 RIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGF 160
+ A P ACA+EMVH SLIHDDLP MDDD RRG P++H +G AILAGDAL F
Sbjct: 68 QSTALPAACAIEMVHTYSLIHDDLPAMDDDELRRGLPTSHIKFGEANAILAGDALLTRAF 127
Query: 161 QHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE----PNL--VEFVQEK 214
+ + + + + ++A A G+ GM GQ DLE E P L +E + ++
Sbjct: 128 ELLAN----QIEVKSCAAACCVDLANAAGAVGMVGGQVADLESEHLENPTLEILEAIHKR 183
Query: 215 KFGEMSECSAVC-GGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K G + CSA+ G + GAD +++L RYG +G+ +Q+ DD+L+ DEEK
Sbjct: 184 KTGRLI-CSALTMGARIGGADPATLKNLERYGTCIGLAFQITDDLLDLTG----DEEKMG 238
Query: 274 K-------KGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
K GK +Y + GVE++ ++ L +A + +G + L FI
Sbjct: 239 KGVRKDADHGKLTYPSLIGVEESRRRSQNLIEEACLSIAPLGSHGQRLEELAHFI 293
>gi|347755955|ref|YP_004863519.1| farnesyl-diphosphate synthase [Candidatus Chloracidobacterium
thermophilum B]
gi|347588473|gb|AEP13003.1| farnesyl-diphosphate synthase [Candidatus Chloracidobacterium
thermophilum B]
Length = 292
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/257 (37%), Positives = 143/257 (55%), Gaps = 17/257 (6%)
Query: 42 LKTYWTTLITEIDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
++ Y+ + E+++ L++ + P +I+E+MRYS++A G KR P++ +AA E+FG
Sbjct: 2 IEAYFAEKVPEVNRWLDQLMPPVTTPPPRIHEAMRYSLMAGG-KRLRPILVLAAGEVFGG 60
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+P ACA EMVH SLIHDDLP MD+D RRG P+ H + AILAGD L
Sbjct: 61 APERLYPVACAFEMVHTYSLIHDDLPAMDNDDLRRGMPTCHKQFDEATAILAGDGLMTHA 120
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGST-GMAAGQFLDLEGEPNLVE-----FVQE 213
F+ + P + +RVI E+A G+ GM AGQ +DLE E ++ F+
Sbjct: 121 FRILAEMD----APAEQKVRVIRELAVGSGTVEGMIAGQIVDLEAEGKPIDAGRLAFIHR 176
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA---QTPRDEE 270
K G + + VCGG +A A + ++ L YG VG+ +Q+ DDIL+ A Q +
Sbjct: 177 AKTGALIRGALVCGGIVADAAESDLALLSAYGDRVGLAFQIADDILDETATAEQLGKTPG 236
Query: 271 KKKKKGK-SYVAFYGVE 286
K GK +Y A YG+E
Sbjct: 237 KDAAAGKATYPALYGLE 253
>gi|358451415|ref|ZP_09161849.1| polyprenyl synthetase [Marinobacter manganoxydans MnI7-9]
gi|357224648|gb|EHJ03179.1| polyprenyl synthetase [Marinobacter manganoxydans MnI7-9]
Length = 298
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/294 (36%), Positives = 150/294 (51%), Gaps = 20/294 (6%)
Query: 45 YWTTLITEIDQNLEKAITVKYPE-QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIA 103
+ T +D L++ IT ++ E+MRYSVL G KR P +C+AA + G
Sbjct: 11 FLETCRARVDAELDRCITRDSASGRLQEAMRYSVLGGG-KRIRPALCLAAAKAMGQTGDE 69
Query: 104 AFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHI 163
A AC++E++HA SLIHDDLP MDDD RRG+P+ H + AILAGDAL L F +
Sbjct: 70 ALIPACSVELIHAYSLIHDDLPAMDDDELRRGRPTTHIAFDEATAILAGDALQALAFGWL 129
Query: 164 VSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQ-----EKKFGE 218
P L PE L ++ E+ARA G GM GQ +DLE + Q K G
Sbjct: 130 AE--APGL-PESVRLIMVRELARASGHGGMVGGQAIDLESVGKTLALAQLETMHRHKTGA 186
Query: 219 MSECSAVCGGFLA-GADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKK 272
+ E S G A D+ + SL +Y +A+G+ +QV DD+L+ + T P+ +
Sbjct: 187 LIETSVRIGALTAPSVDEQALASLTQYAKALGLAFQVQDDLLDIEGDTTVIGKPQGSDAA 246
Query: 273 KKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
+ K +Y A G+E A E L +A++ L F D PL + DY R
Sbjct: 247 RAK-PTYPALLGLEGAREHLANLLEQAQQSLQAFGPEAD---PLRAMADYVVAR 296
>gi|291532853|emb|CBL05966.1| farnesyl-diphosphate synthase [Megamonas hypermegale ART12/1]
Length = 292
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 160/298 (53%), Gaps = 20/298 (6%)
Query: 42 LKTYWTTLITEIDQNLEKAIT--VKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
+K+Y + I+Q L + T + + + ++M YS++A G KR P++ +AA + GV
Sbjct: 2 MKSYMQRKMDLINQQLNEIYTENMALNKDLAKAMNYSLMA-GGKRLRPILIMAAADALGV 60
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+ + ++E +H SLIHDDLP MD+D RRG+ +NH V+G +AILAGDAL +
Sbjct: 61 DGEKFLRLSTSIEFIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGEALAILAGDALLTMA 120
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEM 219
F+ I T ++ E ++ ++I E+++A G+ GM GQ +D++ E ++ K+
Sbjct: 121 FEIIA--TDKNVDAETKI-KIITEMSKAAGAEGMVGGQVIDMQSENKKIDIQTLKQMHAA 177
Query: 220 SE----CSAV-CGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL-----EAKAQTPRDE 269
C+A+ G LAGAD+ ++ +L Y R G+ +Q+ DDIL E P
Sbjct: 178 KTGALFCAAIRSGAILAGADEKQLANLTEYARQFGLAFQITDDILDVVGDEKTIGKPVGS 237
Query: 270 EKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
++K K +YV + A +A+E KAK L F G+N L + +DY R
Sbjct: 238 DEKNHK-STYVTLGSLGSAKALAQEAVDKAKASLVDF---GENAEFLRALVDYLITRN 291
>gi|392531890|ref|ZP_10279027.1| geranyltranstransferase [Carnobacterium maltaromaticum ATCC 35586]
Length = 293
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/255 (37%), Positives = 141/255 (55%), Gaps = 20/255 (7%)
Query: 61 ITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLI 120
I V ++E+M YSV A G KR P++ +A + G N + A ALE +H SLI
Sbjct: 24 IGVPTKGSLFEAMTYSVKAGG-KRIRPLLLLATIQSLGGNIKSGLLAASALEYIHTYSLI 82
Query: 121 HDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRV 180
HDDLP MDDD RRGQP+NH +YG +AILAGD L LGF+ +++ +P + E + +R+
Sbjct: 83 HDDLPAMDDDALRRGQPTNHIIYGEALAILAGDGLLTLGFE-LLAKSP---LTEKQKVRL 138
Query: 181 IAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----VQEKKFGEMSECSAVCGGFLAGADD 235
I +++A G+ GM GQ D+EGE + + +KK GE+ + +A G + AD
Sbjct: 139 ILALSKAAGANGMVVGQVSDMEGESQKLTLTDLQNIHKKKTGELLKFAAYAGAVIVDADQ 198
Query: 236 DEIQSLRRYGRAVGVLYQVVDDIL-------EAKAQTPRDEEKKKKKGKSYVAFYGVEKA 288
+ L ++ +G+ +Q+ DDIL E +T D +K + G +K
Sbjct: 199 ETETQLVKFASHLGLAFQIRDDILDVIGTTAELGKETGMDAVHQKSTYPGLLTLAGAKK- 257
Query: 289 MEVAEELRAKAKEEL 303
E+AEEL AKA+ L
Sbjct: 258 -ELAEEL-AKAQTSL 270
>gi|414084354|ref|YP_006993062.1| farnesyl diphosphate synthase [Carnobacterium maltaromaticum LMA28]
gi|412997938|emb|CCO11747.1| farnesyl diphosphate synthase [Carnobacterium maltaromaticum LMA28]
Length = 293
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/255 (37%), Positives = 141/255 (55%), Gaps = 20/255 (7%)
Query: 61 ITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLI 120
I V ++E+M YSV A G KR P++ +A + G N + A ALE +H SLI
Sbjct: 24 IGVPTKGSLFEAMTYSVKAGG-KRIRPLLLLATIQSLGGNIKSGLLAASALEYIHTYSLI 82
Query: 121 HDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRV 180
HDDLP MDDD RRGQP+NH +YG +AILAGD L LGF+ +++ +P + E + +R+
Sbjct: 83 HDDLPAMDDDALRRGQPTNHIIYGEALAILAGDGLLTLGFE-LLAKSP---LTEKQKVRL 138
Query: 181 IAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----VQEKKFGEMSECSAVCGGFLAGADD 235
I +++A G+ GM GQ D+EGE + + +KK GE+ + +A G + AD
Sbjct: 139 ILALSKAAGANGMVVGQVSDMEGESQKLTLTDLQNIHKKKTGELLKFAAYAGAVIVDADQ 198
Query: 236 DEIQSLRRYGRAVGVLYQVVDDIL-------EAKAQTPRDEEKKKKKGKSYVAFYGVEKA 288
+ L ++ +G+ +Q+ DDIL E +T D +K + G +K
Sbjct: 199 ETETQLVKFASHLGLAFQIRDDILDVIGTTAELGKETGMDAVHQKSTYPGLLTLAGAKK- 257
Query: 289 MEVAEELRAKAKEEL 303
E+AEEL AKA+ L
Sbjct: 258 -ELAEEL-AKAQTSL 270
>gi|187478668|ref|YP_786692.1| geranyltranstransferase [Bordetella avium 197N]
gi|115423254|emb|CAJ49787.1| geranyltranstransferase [Bordetella avium 197N]
Length = 303
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/311 (35%), Positives = 156/311 (50%), Gaps = 35/311 (11%)
Query: 28 PVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPP 87
P++ A L ++ TL+ D P +++E+MRY+VL G KR
Sbjct: 5 PIACADWLHDRALHIEQVLETLMPAAD---------IAPARLHEAMRYAVLGGG-KRVRA 54
Query: 88 VMCVAACELFGVN------RIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHT 141
+ AA + VN + A A+E++HA SL+HDDLPCMDDD RRG+P+ H
Sbjct: 55 ALVYAAGQACPVNSSLLAIEASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTTHV 114
Query: 142 VYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL 201
+ A+LAGDAL PL F+ +++ P + V++ +ARA GS GMA GQ +DL
Sbjct: 115 QFDEATAMLAGDALQPLAFE-LLAGMP---IAPALVVQATQVLARAAGSLGMAGGQAIDL 170
Query: 202 EG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVD 256
+ ++ + K G M S GG +AGA Q+L Y +AVG+ +QVVD
Sbjct: 171 HSVGKRLTRDELQTMHSMKTGAMLAASVTLGGVVAGASSAVRQALDAYAQAVGLAFQVVD 230
Query: 257 DILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKY 309
DIL+ A + K GK +YV+ G+E A E+AEELR A + L
Sbjct: 231 DILDVTADS---ASLGKTAGKDAVENKPTYVSLLGLEPARELAEELRLAAHQALGPLGDS 287
Query: 310 GDNVLPLYSFI 320
G + L FI
Sbjct: 288 GARLAQLADFI 298
>gi|237795298|ref|YP_002862850.1| putative geranyltranstransferase [Clostridium botulinum Ba4 str.
657]
gi|229262575|gb|ACQ53608.1| putative geranyltranstransferase [Clostridium botulinum Ba4 str.
657]
Length = 290
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 144/268 (53%), Gaps = 19/268 (7%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
Y ++IYE+M YS+ A G KR PV+ + L+ + A P A A+EM+H SLIHDDL
Sbjct: 25 YDKKIYEAMAYSLEA-GGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDL 83
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MD+D RRG+P+NH ++G IAILAGDAL + ++ L + L+ I
Sbjct: 84 PAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYS---LKNGEKALKACYTI 140
Query: 185 ARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A+A G GM GQ +D+ E + ++ +KK G + + S + G L A +I+
Sbjct: 141 AKAAGVDGMIGGQVVDILSEDKSISLDELHYMHKKKTGALIKASILAGAILGSATYTDIE 200
Query: 240 SLRRYGRAVGVLYQVVDDILEAKA-------QTPRDEEKKKKKGKSYVAFYGVEKAMEVA 292
L YG +G+ +Q+ DDIL+ + +T DE+ K ++V Y ++K E+
Sbjct: 201 LLGEYGDNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHK---TTFVKVYSIDKCNELC 257
Query: 293 EELRAKAKEELDRFKKYGDNVLPLYSFI 320
E+ K + L++ KK D + + F+
Sbjct: 258 TEMTNKCFDILNKIKKNTDKLKEITMFL 285
>gi|357049940|ref|ZP_09111154.1| hypothetical protein HMPREF9478_01137 [Enterococcus saccharolyticus
30_1]
gi|355382423|gb|EHG29521.1| hypothetical protein HMPREF9478_01137 [Enterococcus saccharolyticus
30_1]
Length = 297
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 148/271 (54%), Gaps = 27/271 (9%)
Query: 59 KAITVKYPEQ------IYESMRYSVLAKGTKRAPPVMCVAACELFGVN-RIAAFPTACAL 111
+A+ V++ E+ + +SM YS+ A G KR P++ A F + + + TA AL
Sbjct: 16 EAVIVRFLEEHTSDQTLKDSMLYSIHAGG-KRIRPLLLTATVASFHKSMTLGVYQTAAAL 74
Query: 112 EMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHL 171
EM+H SLIHDDLP MDDD RRG+P+NH VYG +AILAGD L FQ + + L
Sbjct: 75 EMIHTYSLIHDDLPAMDDDALRRGKPTNHKVYGEALAILAGDGLLTAAFQLL---SLADL 131
Query: 172 VPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----VQEKKFGEMSECSAVC 226
P+ ++L ++ +++ G+ GM AGQ D++GE + + E+K GE+ + +
Sbjct: 132 EPDKKIL-LLQQLSHTAGTAGMVAGQAADIQGENQQLTLDELISIHERKTGELIRFAVIA 190
Query: 227 GGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP-------RDEEKKKKKGKSY 279
GG LA ++ IQ L ++ R +G+ +Q+ DD+L+ + T RD+ K +Y
Sbjct: 191 GGILADQTEEVIQLLDQFARHMGLAFQIRDDLLDVTSTTEVLGKIVHRDDALAK---STY 247
Query: 280 VAFYGVEKAMEVAEELRAKAKEELDRFKKYG 310
A G++ A E ++ +A LD YG
Sbjct: 248 PALLGLDGASEALKDELNQAYAVLDELSSYG 278
>gi|170757695|ref|YP_001781434.1| geranyltranstransferase [Clostridium botulinum B1 str. Okra]
gi|169122907|gb|ACA46743.1| putative geranyltranstransferase [Clostridium botulinum B1 str.
Okra]
Length = 290
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/268 (34%), Positives = 144/268 (53%), Gaps = 19/268 (7%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
Y ++IYE+M YS+ A G KR PV+ + L+ + A P A A+EM+H SLIHDDL
Sbjct: 25 YDKKIYEAMAYSLEA-GGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDL 83
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MD+D RRG+P+NH ++G IAILAGDAL + ++ L + L+ I
Sbjct: 84 PAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYS---LKNGEKALKACYTI 140
Query: 185 ARAVGSTGMAAGQFLDLEGEPNLVE-----FVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A+A GM GQ +D+ E + ++ +KK G + + S + G L A +I+
Sbjct: 141 AKAAEVDGMIGGQVVDILSEDKSITLDELYYMHKKKTGALIKASILAGAILGSATYTDIE 200
Query: 240 SLRRYGRAVGVLYQVVDDILEAKA-------QTPRDEEKKKKKGKSYVAFYGVEKAMEVA 292
L YG +G+ +Q+ DDIL+ + +T DE+ K ++V YG+EK E+
Sbjct: 201 LLGEYGDNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHK---TTFVKVYGIEKCNELC 257
Query: 293 EELRAKAKEELDRFKKYGDNVLPLYSFI 320
E+ K + L++ KK D + + F+
Sbjct: 258 TEMTNKCFDILNKIKKNTDKLKEITMFL 285
>gi|257869058|ref|ZP_05648711.1| geranyltranstransferase [Enterococcus gallinarum EG2]
gi|257803222|gb|EEV32044.1| geranyltranstransferase [Enterococcus gallinarum EG2]
Length = 294
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 144/270 (53%), Gaps = 25/270 (9%)
Query: 59 KAITVKYPEQ------IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALE 112
+A+ V++ E+ + +SM YS+ A G + P ++ + + TA ALE
Sbjct: 13 EAVIVRFLEEHTSDQTLKDSMLYSIHAGGKRIRPLLLTATVASFHKSMTLGVYQTAAALE 72
Query: 113 MVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLV 172
M+H SLIHDDLP MDDD RRG+P+NH VYG +AILAGD L FQ + + L
Sbjct: 73 MIHTYSLIHDDLPAMDDDALRRGKPTNHKVYGEALAILAGDGLLTAAFQLL---SLADLE 129
Query: 173 PEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----VQEKKFGEMSECSAVCG 227
P+ ++L ++ +++ G+ GM AGQ D++GE + + E+K GE+ + + G
Sbjct: 130 PDKKIL-LLQQLSHTAGTAGMVAGQAADIQGENQQLTLDELISIHERKTGELIRFAVIAG 188
Query: 228 GFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP-------RDEEKKKKKGKSYV 280
G LA ++ IQ L ++ R +G+ +Q+ DD+L+ + T RD+ K +Y
Sbjct: 189 GILADQTEEVIQLLDQFARHMGLAFQIRDDLLDVTSTTEVLGKIVHRDDALAK---STYP 245
Query: 281 AFYGVEKAMEVAEELRAKAKEELDRFKKYG 310
A G++ A E ++ +A LD YG
Sbjct: 246 ALLGLDGASEALKDELNQAYAVLDELSSYG 275
>gi|168184569|ref|ZP_02619233.1| geranyltranstransferase [Clostridium botulinum Bf]
gi|182672379|gb|EDT84340.1| geranyltranstransferase [Clostridium botulinum Bf]
Length = 290
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 144/268 (53%), Gaps = 19/268 (7%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
Y ++IYE+M YS+ A G KR PV+ + L+ + A P A A+EM+H SLIHDDL
Sbjct: 25 YDKKIYEAMAYSLEA-GGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDL 83
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MD+D RRG+P+NH ++G IAILAGDAL + ++ L + L+ I
Sbjct: 84 PAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYS---LKNGEKALKACYTI 140
Query: 185 ARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A+A G GM GQ +D+ E + ++ +KK G + + S + G L A +I+
Sbjct: 141 AKAAGVDGMIGGQVVDILSEDKSISLDELHYMHKKKTGALIKASILAGAILGSATYTDIE 200
Query: 240 SLRRYGRAVGVLYQVVDDILEAKA-------QTPRDEEKKKKKGKSYVAFYGVEKAMEVA 292
L YG +G+ +Q+ DDIL+ + +T DE+ K ++V Y ++K E+
Sbjct: 201 LLGEYGDNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHK---TTFVKVYSIDKCNELC 257
Query: 293 EELRAKAKEELDRFKKYGDNVLPLYSFI 320
E+ K + L++ KK D + + F+
Sbjct: 258 TEMTNKCFDILNKIKKNTDKLKEITMFL 285
>gi|404475626|ref|YP_006707057.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
B2904]
gi|404437115|gb|AFR70309.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
B2904]
Length = 295
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/285 (34%), Positives = 153/285 (53%), Gaps = 20/285 (7%)
Query: 40 FDLKTYWTTLITEID---QNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
+LK Y T + +ID N+ K I + + ++Y + A G KR P++ ACEL
Sbjct: 1 MNLKEYMNTRLKDIDSEINNIFKTINISLENNFLDMLKYPLDA-GGKRLRPILTCLACEL 59
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
F + A A +LE++H SL+HDDLP MD+D RRG+P+ H YG AIL GD L
Sbjct: 60 FNGDYKKAIIPAVSLELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGLL 119
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----V 211
F+ I+S+ V + + +++ EI+ A G +GM GQF+DL E ++F +
Sbjct: 120 THSFE-ILSNAN---VNDKTLRKLLYEISYAAGVSGMVMGQFIDLYYEERDIDFEMLKIL 175
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP---RD 268
KK G M + G + ++ ++++ +YG A+G+ +Q+ DDIL+ + +
Sbjct: 176 HSKKTGAMIRGAVRVGAIASEKENINLENITKYGEAIGLAFQIQDDILDVISDNETLGKT 235
Query: 269 EEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDN 312
K +K+GK +YV +G+E A E A E +KE +D Y DN
Sbjct: 236 VGKDEKEGKLTYVKQFGLEGAKEKAME---TSKEAIDYLNVYDDN 277
>gi|401565678|ref|ZP_10806501.1| geranyltranstransferase [Selenomonas sp. FOBRC6]
gi|400185582|gb|EJO19809.1| geranyltranstransferase [Selenomonas sp. FOBRC6]
Length = 291
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/291 (35%), Positives = 146/291 (50%), Gaps = 17/291 (5%)
Query: 42 LKTYWTTLITEIDQNLEK--AITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
+K W ++ LE A T + SM YS++A G KR P++ +AA + G
Sbjct: 1 MKELWKARQALVEHALEAELAKTDVLDATLRASMSYSLMAGG-KRLRPILLMAAADAVGA 59
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+ P A ALEM+H SLIHDDLP MDDD RRG+P+NH VYG IAILAGDAL L
Sbjct: 60 DGTKFLPVAAALEMIHTYSLIHDDLPAMDDDELRRGKPTNHVVYGDGIAILAGDALLTLA 119
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----VQEK 214
F I+ H +LRV+ EI+RA G+ GM GQ LDL E + V
Sbjct: 120 FSVILRQKDVH---AEALLRVVDEISRAAGAEGMVGGQVLDLMAEDRQITMEELRRVHMG 176
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDE 269
K G + + G LAGA ++++ +L Y G+ +Q+ DDIL+ P
Sbjct: 177 KTGALFHAALRSGAILAGATEEQLAALTAYADHFGLAFQITDDILDVIGTAEDIGKPVGS 236
Query: 270 EKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
++K K +YV + +A E+A A+ L F D + L +++
Sbjct: 237 DEKNHK-STYVTLTSLAEAQELARRTVEDAEAALSVFGSEADFLRQLVAYL 286
>gi|296122688|ref|YP_003630466.1| polyprenyl synthetase [Planctomyces limnophilus DSM 3776]
gi|296015028|gb|ADG68267.1| Polyprenyl synthetase [Planctomyces limnophilus DSM 3776]
Length = 318
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 161/305 (52%), Gaps = 21/305 (6%)
Query: 32 ASQLRSTQFDLKTYWTTLITEIDQNLEKAITVK------YPEQIYESMRYSVLAKGTKRA 85
A+ L S + + L +I+ ++ A++ P ++ESMRYS L G KR
Sbjct: 14 ATNLSSGAVEFTQHLRELQKQIEMAMDTALSATPDVTRFVPPSLFESMRYSALGGG-KRL 72
Query: 86 PPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGV 145
PV+ + A E G + + A P A ALEM+H SLIHDDLP MDDD RRG+P+NH VYG
Sbjct: 73 RPVLVLLASEACGADPLQAMPAAVALEMIHCYSLIHDDLPAMDDDDLRRGRPTNHIVYGE 132
Query: 146 DIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP 205
AILAGD L F+ + + + + L +A++A A G GM GQ DL E
Sbjct: 133 ATAILAGDGLLTRAFEVLAT----EISNKELALACVADLASAAGWCGMVGGQAADLAAET 188
Query: 206 NLV------EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL 259
V E + +K G + C+ GG L GA +++SL RYG A+G+ +Q+ DD+L
Sbjct: 189 TPVTTLAELEQIHHRKTGRLLACALTMGGRLGGASVQQLESLARYGFAIGLAFQIADDLL 248
Query: 260 EAKAQTP---RDEEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLP 315
+ + + + +K + GK +Y F GVE + E A +L +A EL+ F G +
Sbjct: 249 DVEGSSEKLGKQTQKDAQAGKATYPGFLGVEASRERAADLVKQACRELEVFGPRGQWLSD 308
Query: 316 LYSFI 320
L +I
Sbjct: 309 LALYI 313
>gi|261417748|ref|YP_003251430.1| polyprenyl synthetase [Geobacillus sp. Y412MC61]
gi|297529440|ref|YP_003670715.1| polyprenyl synthetase [Geobacillus sp. C56-T3]
gi|319767440|ref|YP_004132941.1| polyprenyl synthetase [Geobacillus sp. Y412MC52]
gi|448238671|ref|YP_007402729.1| (2E,6E)-farnesyl diphosphate synthase [Geobacillus sp. GHH01]
gi|261374205|gb|ACX76948.1| Polyprenyl synthetase [Geobacillus sp. Y412MC61]
gi|297252692|gb|ADI26138.1| Polyprenyl synthetase [Geobacillus sp. C56-T3]
gi|317112306|gb|ADU94798.1| Polyprenyl synthetase [Geobacillus sp. Y412MC52]
gi|445207513|gb|AGE22978.1| (2E,6E)-farnesyl diphosphate synthase [Geobacillus sp. GHH01]
Length = 297
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/218 (38%), Positives = 126/218 (57%), Gaps = 11/218 (5%)
Query: 63 VKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHD 122
++ PE + ++M YS L G KR P++ +A + G + P ACA+EM+H SLIHD
Sbjct: 28 LRGPETLKKAMAYS-LEAGGKRIRPLLLLATIQALGKDPAIGLPVACAIEMIHTYSLIHD 86
Query: 123 DLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIA 182
DLP MD+D RRG+P+NH V+G +AILAGDAL FQ +++ VP P L++I
Sbjct: 87 DLPSMDNDDLRRGKPTNHKVFGEAMAILAGDALLTYAFQ-LMAEIDDDRVPPPVRLQLIE 145
Query: 183 EIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCGGFLAGADDDE 237
++A+A G GM AGQ D+E E +E++ K G+M + S G L GAD +
Sbjct: 146 QLAKAAGPEGMVAGQAADMEAEGKTLALAELEYIHRHKTGKMLQYSVHAGALLGGADGRQ 205
Query: 238 IQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKK 275
+ L + +G+ +Q+ DDIL+ + EEK K+
Sbjct: 206 TRELNEFAAHLGLAFQIRDDILDIEGM----EEKIGKR 239
>gi|385330322|ref|YP_005884273.1| geranyltranstransferase [Marinobacter adhaerens HP15]
gi|311693472|gb|ADP96345.1| geranyltranstransferase [Marinobacter adhaerens HP15]
Length = 298
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 150/294 (51%), Gaps = 20/294 (6%)
Query: 45 YWTTLITEIDQNLEKAITVKYPE-QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIA 103
+ T +D L++ IT ++ E+MRYSVL G KR P +C+AA + G
Sbjct: 11 FLETCRARVDAELDRCITRDSASGRLQEAMRYSVLGGG-KRIRPALCLAAAKAMGQTGDE 69
Query: 104 AFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHI 163
A AC++E++HA SLIHDDLP MDDD RRG+P+ H + AILAGDAL L F +
Sbjct: 70 ALIPACSVELIHAYSLIHDDLPAMDDDELRRGRPTTHIAFDEATAILAGDALQALAFGWL 129
Query: 164 VSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQ-----EKKFGE 218
P L R++ ++ E+ARA G GM GQ +DLE + Q K G
Sbjct: 130 AE--APGLSESVRLI-MVRELARASGHGGMVGGQAIDLESVGKTLALAQLETMHRHKTGA 186
Query: 219 MSECSAVCGGFLA-GADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKK 272
+ E S G A D+ + SL +Y +A+G+ +QV DD+L+ + T P+ +
Sbjct: 187 LIETSVRIGALTAPSVDEQALASLTQYAKALGLAFQVQDDLLDIEGDTTVIGKPQGSDAA 246
Query: 273 KKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
+ K +Y A G+E A E L +A++ L F D PL + DY R
Sbjct: 247 RAK-PTYPALLGLEGAREHLANLLEQAQQSLQAFGPEAD---PLRAMADYVVAR 296
>gi|253682719|ref|ZP_04863516.1| geranyltranstransferase [Clostridium botulinum D str. 1873]
gi|253562431|gb|EES91883.1| geranyltranstransferase [Clostridium botulinum D str. 1873]
Length = 287
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/243 (34%), Positives = 140/243 (57%), Gaps = 19/243 (7%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
Y + +Y+SM+YS+ G KR P++ ++ ++ N P ACA+EM+H SLIHDDL
Sbjct: 22 YNKILYDSMKYSIEV-GGKRIRPILMLSTYSIYKNNYKDIMPMACAIEMIHTYSLIHDDL 80
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MD+D RRG+P+NH V+G IAILAGD L + +++ H +VI+E
Sbjct: 81 PGMDNDDLRRGKPTNHKVFGEAIAILAGDGLLNEAMNIMFNYSLTHDKLALMASKVISE- 139
Query: 185 ARAVGSTGMAAGQFLDL--EGE---PNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A G+ GM GQ +D+ EG+ P+ ++++ + K G++ + S + G L GA +EI+
Sbjct: 140 --ASGAEGMIGGQVVDIISEGQEISPDKLKYMHKNKTGQLIKSSIIAGAILGGASKEEIE 197
Query: 240 SLRRYGRAVGVLYQVVDDILEAKAQTP-------RDEEKKKKKGKSYVAFYGVEKAMEVA 292
L +G +G+ +Q+ DDIL+ + +D+E K ++++ +G++K E+
Sbjct: 198 ILDEFGSKLGLAFQIKDDILDVIGDSKILGKEVHKDDENNK---TTFISHFGLKKCKELC 254
Query: 293 EEL 295
EL
Sbjct: 255 VEL 257
>gi|307243218|ref|ZP_07525389.1| geranyltranstransferase [Peptostreptococcus stomatis DSM 17678]
gi|306493346|gb|EFM65328.1| geranyltranstransferase [Peptostreptococcus stomatis DSM 17678]
Length = 294
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/255 (34%), Positives = 140/255 (54%), Gaps = 17/255 (6%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
Y + ++ +M YS A G KR P++ + + +L G P A A+EM+H SLIHDDL
Sbjct: 28 YQKTLFSAMNYSYKA-GGKRLRPILIMESYKLCGGKGSEYLPYAAAIEMIHTYSLIHDDL 86
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P +D+D RRG+ +NH V+G +AILAGD L ++ I++H + +P ++ I
Sbjct: 87 PALDNDDLRRGKKTNHKVFGEAMAILAGDGLLNYAYEVILNHA-LNSSDQPSAIKACKAI 145
Query: 185 ARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A G GM GQ +D+E E + +F+ K M G +LAGADDD ++
Sbjct: 146 ADGAGIYGMVGGQVVDVESESKEIDLACLDFIHLNKTAAMIVACMKSGAYLAGADDDTVE 205
Query: 240 SLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVA 292
L YGR +G+ +Q+ DDIL+ + ++E K G +Y G+E++ E+A
Sbjct: 206 KLEAYGRYLGLAFQIADDILDIEGD---EKELGKNVGSDIENDKATYPHILGMERSKEIA 262
Query: 293 EELRAKAKEELDRFK 307
+L KAKE+++ F+
Sbjct: 263 RDLVVKAKEKIEAFE 277
>gi|442805670|ref|YP_007373819.1| farnesyl diphosphate synthase [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442741520|gb|AGC69209.1| farnesyl diphosphate synthase [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 298
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 154/301 (51%), Gaps = 19/301 (6%)
Query: 40 FDLKTYWTTLITEIDQNLEK---AITVKYPEQ-IYESMRYSVLAKGTKRAPPVMCVAACE 95
+ K L T +D L K + + PE+ + ESM YSV+A G KR PV+ +A +
Sbjct: 1 MNFKEEMRNLTTLVDDYLVKYFDRLNREVPEKRLVESMSYSVMA-GGKRIRPVLMLAVTK 59
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
+ + P A A+EM+H SLIHDDLP MD+D RRG+ +NH V+G +AILAGDAL
Sbjct: 60 MLSGDPQEVMPFAAAIEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGEAMAILAGDAL 119
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EF 210
F + + ++ IARA G GM AGQ +D+E E V +
Sbjct: 120 LNEAFSLLFEASANAGDKMEHWVKASCIIARAAGRDGMIAGQVIDMESEGTQVSATKLKT 179
Query: 211 VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT----- 265
+ KK G + S + G +D+I++L Y +G+ +Q+ DDIL+ +
Sbjct: 180 MHRKKTGALITASVIVPAVFLGLSEDKIKALTEYAENIGIAFQIRDDILDVEGTIEELGK 239
Query: 266 PRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAAD 325
P +++ +K +YV+ YG++ A E+ E+ KA E LD F G+ L Y A+
Sbjct: 240 PVGSDERNRK-TTYVSLYGLDGAKEMLREVTRKAVESLDVF---GERAWFLKEIAYYIAE 295
Query: 326 R 326
R
Sbjct: 296 R 296
>gi|334127647|ref|ZP_08501552.1| geranyltranstransferase [Centipeda periodontii DSM 2778]
gi|333388960|gb|EGK60127.1| geranyltranstransferase [Centipeda periodontii DSM 2778]
Length = 291
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/291 (35%), Positives = 149/291 (51%), Gaps = 17/291 (5%)
Query: 42 LKTYWTTLITEIDQNL--EKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
+K W +++ L E A T + + SM YS++A G KR PV+ +AA + G
Sbjct: 1 MKELWKKRQALVERALTEEMAKTPVLDDTLRASMEYSLMAGG-KRLRPVLLMAAADAVGA 59
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+ P ACALEM+H SLIHDDLP MD+D RRG+P+NH + IAILAGDAL L
Sbjct: 60 DGTKFLPVACALEMIHTYSLIHDDLPAMDNDNLRRGKPTNHVKFSEGIAILAGDALLTLA 119
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----VQEK 214
F I+ VP +LRV+ EI+RA G+ GM GQ LDL E + V
Sbjct: 120 FTVILRQKD---VPAEALLRVVDEISRAAGAEGMVGGQVLDLAAENCQITMEELRRVHMG 176
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDE 269
K G + + G LAGA ++++ L Y G+ +Q+ DDIL+ P
Sbjct: 177 KTGALFHAALRSGAILAGASEEQLAVLTAYADHFGLAFQITDDILDVIGSAEELGKPVGS 236
Query: 270 EKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
++K K +YV+ + +A E+A +A LD F D + L +++
Sbjct: 237 DEKNHK-STYVSLTSLAEAQELARNTVEEAVAALDGFGTEADFLRALVTYL 286
>gi|153937414|ref|YP_001387682.1| geranyltranstransferase [Clostridium botulinum A str. Hall]
gi|152933328|gb|ABS38827.1| putative geranyltranstransferase [Clostridium botulinum A str.
Hall]
Length = 290
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/268 (34%), Positives = 142/268 (52%), Gaps = 19/268 (7%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
Y + IYE+M YS+ A G KR PV+ + L+ + A P A A+EM+H SLIHDDL
Sbjct: 25 YDKNIYEAMAYSLEA-GGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDL 83
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MD+D RRG+P+NH ++G IAILAGDAL + ++ L + L I
Sbjct: 84 PAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYS---LKNGEKALEACYAI 140
Query: 185 ARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A+A G GM GQ +D+ E + ++ +KK G + + S + G L +I+
Sbjct: 141 AKAAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKKTGALIKASILAGAILGSDTYTDIE 200
Query: 240 SLRRYGRAVGVLYQVVDDILEAKA-------QTPRDEEKKKKKGKSYVAFYGVEKAMEVA 292
L YG +G+ +Q+ DDIL+ + +T DE+ K ++V YG+EK E+
Sbjct: 201 LLGEYGDNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHK---TTFVKVYGIEKCNELC 257
Query: 293 EELRAKAKEELDRFKKYGDNVLPLYSFI 320
E+ K + L++ KK D + + F+
Sbjct: 258 TEMTNKCFDILNKIKKNTDKLKEITMFL 285
>gi|293604269|ref|ZP_06686676.1| geranyltranstransferase [Achromobacter piechaudii ATCC 43553]
gi|292817146|gb|EFF76220.1| geranyltranstransferase [Achromobacter piechaudii ATCC 43553]
Length = 303
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/306 (35%), Positives = 159/306 (51%), Gaps = 28/306 (9%)
Query: 35 LRSTQFDLKTYWTTLITEIDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVA 92
+++TQ + + ++ L+ + P +++E+MRY+VL G KR M A
Sbjct: 1 MKTTQLPFAEWLQGRVRHVEDVLDDLMPPAEVLPVRLHEAMRYAVLGGG-KRVRAAMVYA 59
Query: 93 A---CELFG-VNRIAAF--PTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVD 146
A C + G V I A A A+E++HA SL+HDDLPCMD+D RRG+P+ H +
Sbjct: 60 AGQACPVSGSVLAIEASLDRAAAAVELIHAYSLVHDDLPCMDNDTLRRGRPTTHVQFDEA 119
Query: 147 IAILAGDALFPLGFQHIVSH-TPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG-- 203
A+LAGDAL PL F + S P L +++ +ARA GS GMA GQ +DL
Sbjct: 120 TAMLAGDALQPLAFDLLASMPIAPAL-----IVQATQSLARAAGSQGMAGGQAIDLLSVG 174
Query: 204 ---EPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILE 260
+ ++ + K G M CS GG +AGA Q+L Y +A+G+ +QVVDDIL+
Sbjct: 175 HSLSRDELQTMHSMKTGAMLACSVALGGIVAGASSASRQALDAYAQAMGLAFQVVDDILD 234
Query: 261 AKA------QTPRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVL 314
A +TP + + K +YV+ G+ +A AEELR A+ L+ G +
Sbjct: 235 VTADTASLGKTPGKDAAENK--PTYVSLLGLSEARAFAEELRVAAQAALEPLGDAGLRLA 292
Query: 315 PLYSFI 320
L FI
Sbjct: 293 QLADFI 298
>gi|296533686|ref|ZP_06896240.1| geranyltranstransferase [Roseomonas cervicalis ATCC 49957]
gi|296265985|gb|EFH12056.1| geranyltranstransferase [Roseomonas cervicalis ATCC 49957]
Length = 300
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/276 (38%), Positives = 146/276 (52%), Gaps = 22/276 (7%)
Query: 52 EIDQNLEKAI-TVKYPE-QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTAC 109
EI+ L+ + + PE ++Y +MRYSVL G KR + + FGV+R++A A
Sbjct: 17 EIEHTLDMLLPQEEGPEAKLYAAMRYSVLGGG-KRMRGFLVLEGAAQFGVSRVSALRVAA 75
Query: 110 ALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPP 169
A+EM+HA SL+HDDLP MD+D RRG+P+ H YG AILAGDAL F +++
Sbjct: 76 AIEMLHAYSLVHDDLPAMDNDELRRGKPTTHRAYGEATAILAGDALQAHAFA-VLAGEDT 134
Query: 170 HLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE-------PNLVEFVQEKKFGEMSEC 222
H P R + +A A GS GM GQ LD+ E + + +Q K G++ E
Sbjct: 135 HSDPAVRA-ELCLRLALAAGSKGMCGGQMLDMLAEEATEALSESAIGRLQLLKTGKLIEF 193
Query: 223 SAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK----- 277
SA G L A + +L YGR +G +Q+ DDIL+A A EE K GK
Sbjct: 194 SAEAGAVLGKAPGPQRHALCAYGRELGAAFQIADDILDATASA---EETGKATGKDAGAG 250
Query: 278 --SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGD 311
+ V G+E+A AE L A+A+ LD F + D
Sbjct: 251 KATLVGLLGLERARVQAERLAAQARSHLDSFGERAD 286
>gi|28211243|ref|NP_782187.1| geranylgeranyl pyrophosphate synthase [Clostridium tetani E88]
gi|28203683|gb|AAO36124.1| geranyltranstransferase [Clostridium tetani E88]
Length = 288
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 146/276 (52%), Gaps = 23/276 (8%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
Y + +YE+M YSV G KR P++ + +++ N A ACA+EM+H SLIHDDL
Sbjct: 24 YNKSVYEAMSYSV-NIGGKRIRPILALITYKIYNKNYKEALSIACAIEMIHTYSLIHDDL 82
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
PCMDDD RRG+P+NH V+G +A+LAGD L F I+ + + + EI
Sbjct: 83 PCMDDDL-RRGKPTNHKVFGDGLAVLAGDGLLNEAFNIILKNGCQKGMT---WVEAGYEI 138
Query: 185 ARAVGSTGMAAGQFLDLEGEPNLVE-----FVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
+A G GM GQ +D+ +E ++ EKK + S + G L A++ +
Sbjct: 139 GKASGVEGMIGGQVVDVLNTNKSIEIEELDYIHEKKTAALITASIMTGAILGEANEKDTT 198
Query: 240 SLRRYGRAVGVLYQVVDDILEAKAQT-------PRDEEKKKKKGKSYVAFYGVEKAMEVA 292
L+ +G+ +G+ +Q+ DDIL+ ++ T +D+E+ K ++V FYG+EK ++
Sbjct: 199 ILKEFGKKLGLAFQIKDDILDIESDTRKLGKTIGKDKEQNK---NTFVKFYGLEKCKKMC 255
Query: 293 EELRAKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
++L + E L K + L Y +R+F
Sbjct: 256 KDLTSSCIELLQNMNK---DTKELEEITLYLLNRDF 288
>gi|148379844|ref|YP_001254385.1| geranyltranstransferase [Clostridium botulinum A str. ATCC 3502]
gi|148289328|emb|CAL83424.1| geranyltranstransferase [Clostridium botulinum A str. ATCC 3502]
Length = 294
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/268 (34%), Positives = 142/268 (52%), Gaps = 19/268 (7%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
Y + IYE+M YS+ A G KR PV+ + L+ + A P A A+EM+H SLIHDDL
Sbjct: 29 YDKNIYEAMAYSLEA-GGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDL 87
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MD+D RRG+P+NH ++G IAILAGDAL + ++ L + L I
Sbjct: 88 PAMDNDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYS---LKNGEKALEACYAI 144
Query: 185 ARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A+A G GM GQ +D+ E + ++ +KK G + + S + G L +I+
Sbjct: 145 AKAAGVDGMIGGQVVDILSEDKSIPLDELYYMHKKKTGALIKASILAGAILGSDTYTDIE 204
Query: 240 SLRRYGRAVGVLYQVVDDILEAKA-------QTPRDEEKKKKKGKSYVAFYGVEKAMEVA 292
L YG +G+ +Q+ DDIL+ + +T DE+ K ++V YG+EK E+
Sbjct: 205 LLGEYGDNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHK---TTFVKVYGIEKCNELC 261
Query: 293 EELRAKAKEELDRFKKYGDNVLPLYSFI 320
E+ K + L++ KK D + + F+
Sbjct: 262 TEMTNKCFDILNKIKKNTDKLKEITMFL 289
>gi|383788447|ref|YP_005473016.1| geranyltranstransferase [Caldisericum exile AZM16c01]
gi|381364084|dbj|BAL80913.1| geranyltranstransferase [Caldisericum exile AZM16c01]
Length = 298
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 150/273 (54%), Gaps = 12/273 (4%)
Query: 42 LKTYWTTLITEIDQNLEKAI-TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVN 100
+K Y + ID L A+ ++ +Y ++ YS++A G KR P+M +A E +
Sbjct: 5 IKEYLEERKSVIDNYLNIALEKIREDSPLYAAINYSLMA-GGKRLRPIMLIATYESNFED 63
Query: 101 RIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGF 160
P A ++EM+H SLIHDDLP +D+ RRG+P+ H +YG D+A+LAGDAL L F
Sbjct: 64 YEVVLPFAASVEMIHTYSLIHDDLPILDNSDYRRGKPTCHKIYGSDMALLAGDALISLAF 123
Query: 161 QHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL------EGEPNLVEFVQEK 214
+ I S +LR++ + A G+ G+ GQ +D+ E + NL+ +++++
Sbjct: 124 EIISSRKLLEHFEAKFLLRIVHDFAELSGAKGLVGGQVMDMVTMDMDEIDENLILYIEKR 183
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA---QTPRD-EE 270
K + S G L+G +DE+ +L ++ G+ YQ+ DDIL+ + + +D +
Sbjct: 184 KTASLFILSVRVGAILSGVSEDELANLTKFAENFGISYQIQDDILDETSTVEELGKDVHQ 243
Query: 271 KKKKKGKSYVAFYGVEKAMEVAEELRAKAKEEL 303
+K K ++V+ YG++++ +A+E KA L
Sbjct: 244 DRKNKKATFVSLYGLDRSKVLAKEYIEKANSYL 276
>gi|238924568|ref|YP_002938084.1| geranyltranstransferase [Eubacterium rectale ATCC 33656]
gi|238876243|gb|ACR75950.1| geranyltranstransferase [Eubacterium rectale ATCC 33656]
Length = 307
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/293 (33%), Positives = 152/293 (51%), Gaps = 21/293 (7%)
Query: 50 ITEIDQNLEKAITVKYPEQ--IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPT 107
+ I+ LEK + V+ +Q I+E+M YSV A G KR P++ +FG + P
Sbjct: 20 VEHINNVLEKFLPVEEGQQRIIFEAMNYSVRA-GGKRLRPILMEETYHMFGGSSAVIEPF 78
Query: 108 ACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHT 167
A+EM+H SL+HDDLP MD+D RRG+ + H VYG + ILAGDAL L ++ +
Sbjct: 79 MAAIEMIHTYSLVHDDLPAMDNDEYRRGKKTTHAVYGEAMGILAGDALLNLAYE-TAAKA 137
Query: 168 PPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN--------LVEFVQEKKFGEM 219
V + RV R A +A+ G GM GQ +D+E E + ++F+ K G +
Sbjct: 138 FDMEVADTRVARAFAVLAKKAGVYGMVGGQVVDVESEKSDDCSITREKLDFIYRLKTGAL 197
Query: 220 SECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQ-----TPRDEEKKKK 274
E S + G LAGA DE+ + + +G+ +Q+ DD+L+ + P ++K
Sbjct: 198 IESSMMIGAILAGASSDEVSRVEQIAAKLGLAFQIQDDVLDVTSTLEVLGKPVGSDEKNN 257
Query: 275 KGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
K +YV F G++K + E + +A+E+LD Y D L +Y RE
Sbjct: 258 KA-TYVTFEGLDKVVSDVERISKEAEEQLDDL-GYDDAFLK--ELFEYLIHRE 306
>gi|429727348|ref|ZP_19262122.1| putative geranyltranstransferase [Peptostreptococcus anaerobius VPI
4330]
gi|429152800|gb|EKX95610.1| putative geranyltranstransferase [Peptostreptococcus anaerobius VPI
4330]
Length = 295
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/266 (34%), Positives = 144/266 (54%), Gaps = 13/266 (4%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
Y + I+E+M YS+ A G KR P++ + A +L P + A+EM+H SLIHDDL
Sbjct: 28 YQKTIFEAMNYSLRA-GGKRLRPILLMEAYKLCQGQGEDFVPYSVAMEMIHTYSLIHDDL 86
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRV-LRVIAE 183
P +D+D RRG+P+NH V+G +AILAGDAL ++ +++ T H P P + LR E
Sbjct: 87 PALDNDDLRRGKPTNHIVFGEAMAILAGDALLNTAYETMLNATFKH--PRPELSLRAAYE 144
Query: 184 IARAVGSTGMAAGQFLDLEGE-----PNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEI 238
I+R G GM GQ +D+E E + ++++ K M S G LAG D+D +
Sbjct: 145 ISRGAGIYGMIGGQVVDVESEDKKINKDKLDYIHMNKTAAMIVGSVRAGAILAGIDEDRL 204
Query: 239 QSLRRYGRAVGVLYQVVDDIL----EAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEE 294
+SL +Y +G+ +Q+VDDIL + K R +Y + G+ ++ ++ E
Sbjct: 205 ESLTKYAENIGLAFQIVDDILDIEGDEKLLGKRVGSDLDNDKSTYPSLLGISESKKIVEN 264
Query: 295 LRAKAKEELDRFKKYGDNVLPLYSFI 320
L +AK L+ F + + L FI
Sbjct: 265 LIEEAKISLEVFDSDAEFMNALADFI 290
>gi|310829047|ref|YP_003961404.1| polyprenyl synthetase [Eubacterium limosum KIST612]
gi|308740781|gb|ADO38441.1| Polyprenyl synthetase [Eubacterium limosum KIST612]
Length = 297
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 141/277 (50%), Gaps = 17/277 (6%)
Query: 42 LKTYWTTL---ITEIDQNLEKAITVKY--PEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
+K + TL + E D L K+ P+ I +M+YS+ A G KR P++ C
Sbjct: 1 MKPFKETLLEKVKETDHELLACFDRKFDTPDIIVSAMKYSLFAGG-KRLRPILMKETCRC 59
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
G + P ACA+EM+H SLIHDDLP MD+D RRG+P+NH VYG ++AILAGDAL
Sbjct: 60 LGGDSADVKPLACAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGENMAILAGDALL 119
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVE-----FV 211
+ ++ P R ++ +A + G GM GQ D+ E + ++
Sbjct: 120 NYAMETAIAGIPVDPSKTFHYTRALSYLAHSSGVNGMIGGQTGDILSENEAINEEKMYYI 179
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQ-----TP 266
K G + + + +CGGF+A +E +L Y +G+ +Q+VDDIL+ P
Sbjct: 180 HAHKTGALLKAAVLCGGFVAKVTGEERDALETYSEKIGLAFQIVDDILDVTGDEKTLGKP 239
Query: 267 RDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEEL 303
++K K ++V+ YG+ + E EL A + L
Sbjct: 240 VGSDEKNHK-STFVSLYGMASSQEKIRELENGALDAL 275
>gi|158320641|ref|YP_001513148.1| polyprenyl synthetase [Alkaliphilus oremlandii OhILAs]
gi|158140840|gb|ABW19152.1| Polyprenyl synthetase [Alkaliphilus oremlandii OhILAs]
Length = 295
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 94/275 (34%), Positives = 146/275 (53%), Gaps = 20/275 (7%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
Y + + ESM+YS+ A G KR P++ +A+ ++F + P AC +EM+H SLIHDDL
Sbjct: 28 YNQTLIESMKYSLFA-GGKRLRPILSLASYQMFRDDIEEVMPYACGIEMIHTYSLIHDDL 86
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MD+D RRG+ +NH VY +AILAGD L F+ ++ + ++ I EI
Sbjct: 87 PAMDNDDYRRGKLTNHKVYNEGVAILAGDGLLNYSFELMLENAIKQNDIYKHIV-AIKEI 145
Query: 185 ARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
+ + G GM GQ +DLE E ++ +++ K + S G +AGA +++I+
Sbjct: 146 SNSAGVHGMIGGQVVDLESENKIIDKEMLDYIHINKTAALITTSLKVGAIIAGAQEEDIR 205
Query: 240 SLRRYGRAVGVLYQVVDDIL-----EAK--AQTPRDEEKKKKKGKSYVAFYGVEKAMEVA 292
++ + G +G+ +Q+ DDIL EAK RD EK K +Y A G+E ++E
Sbjct: 206 NMEKVGLNLGLAFQIKDDILDVVGDEAKLGKSIGRDLEKHK---STYPALIGLEASIEKV 262
Query: 293 EELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
L K+ L R+ + +L L DY RE
Sbjct: 263 GALTNNVKQLLHRYSSKAEFLLEL---CDYLTSRE 294
>gi|402303522|ref|ZP_10822615.1| putative geranyltranstransferase [Selenomonas sp. FOBRC9]
gi|400378360|gb|EJP31217.1| putative geranyltranstransferase [Selenomonas sp. FOBRC9]
Length = 295
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/299 (34%), Positives = 152/299 (50%), Gaps = 20/299 (6%)
Query: 41 DLKTYWTTLITEIDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
++K W + T +++ L+ + T +++ SM YS++A G KR P++ +AA + G
Sbjct: 4 EMKELWQSRRTLVERALQAELDRTDILDDKLRASMAYSLMAGG-KRLRPILLMAAADAVG 62
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
+ ACALEM+H SLIHDDLP MD+D RRG+ +NH Y AILAGDAL L
Sbjct: 63 ADGTKFITAACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKAYDEGTAILAGDALLTL 122
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----VQE 213
F I+ VP R+LRV+ E++RA G+ GM GQ LDLE E + V
Sbjct: 123 AFTMILRQQD---VPAERLLRVVDEMSRAAGAEGMVGGQMLDLEAENRRISMEELRRVHM 179
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK-- 271
K G + + G LAGA + ++ +L Y G+ +Q+ DDIL+ T D K
Sbjct: 180 GKTGALFRAALRSGAILAGASEQQLAALTAYADHFGLAFQITDDILDVIG-TAEDIGKPV 238
Query: 272 ---KKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+K +YV +++A +A R + +D +GD L + Y R+
Sbjct: 239 GSDEKNHKSTYVTLTSLDEAQSLA---RQTVERAVDALHIFGDEAAFLRELVLYLVRRK 294
>gi|388522881|gb|AFK49502.1| unknown [Medicago truncatula]
Length = 235
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 110/163 (67%), Gaps = 5/163 (3%)
Query: 28 PVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPP 87
P+ A Q + F+ K+Y T +++ L+ A++++ P +++E+MRYS+LA G KR P
Sbjct: 69 PIEAEEQ--NPIFNFKSYMIEKATRVNKALDDAVSLREPLKVHEAMRYSLLAGG-KRVRP 125
Query: 88 VMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDI 147
V+C+AA EL G A P ACA+EM+H SLIHDDLPCMD+D RRG+P+NH V+G D+
Sbjct: 126 VLCLAARELVGGTEPMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDV 185
Query: 148 AILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGS 190
A+LAGDAL F+HI T V R++R I E+A+++GS
Sbjct: 186 AVLAGDALLAFAFEHIAVSTVD--VSPARIVRAIGELAKSIGS 226
>gi|237747173|ref|ZP_04577653.1| geranyltranstransferase [Oxalobacter formigenes HOxBLS]
gi|229378524|gb|EEO28615.1| geranyltranstransferase [Oxalobacter formigenes HOxBLS]
Length = 299
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/255 (38%), Positives = 146/255 (57%), Gaps = 15/255 (5%)
Query: 64 KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDD 123
++PE ++++MRY+VL G KR P++ A LFG TA A+EM+HA SLIHDD
Sbjct: 33 QFPEPLHQAMRYAVL-DGGKRIRPLLVFATGALFGAPVAVMTQTASAVEMIHAYSLIHDD 91
Query: 124 LPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAE 183
+PCMD+D RRG+P+ H +G +A+LAGDAL F ++S LR+++E
Sbjct: 92 MPCMDNDVLRRGKPTLHVQFGEAMALLAGDALQAQAFI-VLSKIDDDAKLVAERLRILSE 150
Query: 184 IARAVGSTGMAAGQFLDLEG-EPNL----VEFVQEKKFGEMSECSAVCGGFLAGA-DDDE 237
A GS GM GQ +DL+ NL +E + K G + + S + G F A D +E
Sbjct: 151 ---ASGSLGMCGGQAIDLDSVGKNLSIDQLEQMHRLKTGALLKASVMLGAFSAKRPDPEE 207
Query: 238 IQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK----SYVAFYGVEKAMEVAE 293
I +L Y +A+G+ +QVVDDIL+ A T + K +YV+ G+E A ++AE
Sbjct: 208 ITALDAYAKAIGLAFQVVDDILDVTADTAILGKTAGKDASDHKPTYVSLLGLENAEKLAE 267
Query: 294 ELRAKAKEELDRFKK 308
+LR +A E ++ F K
Sbjct: 268 KLRCQAHEAIEAFGK 282
>gi|363892252|ref|ZP_09319420.1| hypothetical protein HMPREF9630_00413 [Eubacteriaceae bacterium
CM2]
gi|402838806|ref|ZP_10887309.1| polyprenyl synthetase [Eubacteriaceae bacterium OBRC8]
gi|361964202|gb|EHL17246.1| hypothetical protein HMPREF9630_00413 [Eubacteriaceae bacterium
CM2]
gi|402272366|gb|EJU21587.1| polyprenyl synthetase [Eubacteriaceae bacterium OBRC8]
Length = 295
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 145/278 (52%), Gaps = 16/278 (5%)
Query: 61 ITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLI 120
I + Y +I +SMRYS L+ G KR P + V + + ++ AC +EM+H SLI
Sbjct: 24 INLTYSSKILDSMRYS-LSAGGKRIRPCIFVEVLKSYNIDVKKYLDVACVIEMIHTYSLI 82
Query: 121 HDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRV 180
HDDLP MD+D RRG+P+NH VYG IAILAGDAL ++ + + + ++
Sbjct: 83 HDDLPAMDNDTLRRGKPTNHMVYGDAIAILAGDALLNFAYELLFKFIKNNF--QINSVKA 140
Query: 181 IAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADD 235
EI+ G GM GQ D+ E + E++ E K ++ S V G+LA AD+
Sbjct: 141 CEEISNCAGIYGMIGGQVSDIINENKDISSGNLEYIHENKTAKLIIASMVSAGYLANADE 200
Query: 236 DEIQSLRRYGRAVGVLYQVVDDILEAKAQTP---RDEEKKKKKGK-SYVAFYGVEKAMEV 291
++++ LR+Y +G+ +Q+ DDIL+ + K +GK +Y ++G+EK+
Sbjct: 201 NDMEHLRKYAYNLGMAFQISDDILDIIGNEKLLGKSVGKDVDEGKNTYPKYFGIEKS--- 257
Query: 292 AEELRAKAKEELDRFKKYGDNVLPLYS-FIDYAADREF 328
E+L +D + D + ++ Y +R++
Sbjct: 258 KEKLNGYVNSAIDEISEIKDKDMSFFAQLATYIGNRKY 295
>gi|345861767|ref|ZP_08814019.1| geranyltranstransferase [Desulfosporosinus sp. OT]
gi|344325160|gb|EGW36686.1| geranyltranstransferase [Desulfosporosinus sp. OT]
Length = 277
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/234 (38%), Positives = 128/234 (54%), Gaps = 14/234 (5%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
+ E I + Y L G KR PV+ +A+ E G + P A ALE++H SLIHDDL
Sbjct: 11 WNEDILDQSMYYSLIGGGKRIRPVLALASAEAVGGSSELILPAAVALELIHTYSLIHDDL 70
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MD+D RRG+ SNH V+G AILAGDAL F+ + L R LR+I E+
Sbjct: 71 PAMDNDDYRRGRLSNHKVFGEAQAILAGDALLTYAFEFLADEG---LGQSERQLRIIREV 127
Query: 185 ARAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A A G GM GQ D+ GE N +E + + K G + SA GG LAG +++++
Sbjct: 128 AVAAGKVGMVGGQVADVAGEGKTLTLNEIEEIHKAKTGALLTVSARLGGILAGGTEEQVK 187
Query: 240 SLRRYGRAVGVLYQVVDDILE-----AKAQTPRDEEKKKKKGKSYVAFYGVEKA 288
+L Y +A+G+ +Q+ DDIL+ A P + ++ K +YV+ G+E A
Sbjct: 188 ALTDYAQALGLAFQIKDDILDVVGDSATLGKPAGSDLRQGK-ATYVSLLGLEGA 240
>gi|427402583|ref|ZP_18893580.1| hypothetical protein HMPREF9710_03176 [Massilia timonae CCUG 45783]
gi|425718389|gb|EKU81336.1| hypothetical protein HMPREF9710_03176 [Massilia timonae CCUG 45783]
Length = 299
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 105/301 (34%), Positives = 155/301 (51%), Gaps = 26/301 (8%)
Query: 44 TYWTTLITEIDQNLEKAITV------KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
+ WT E+ +E+A+ + P +++E+MRY+ L G KR P++ AA LF
Sbjct: 7 SAWTR---EVQARVEEALDAFLPPADRVPHKLHEAMRYTTLGGG-KRVRPLLAYAAGALF 62
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
+ A A A+EM+H SL+HDD+PCMDDD RRG+P+ H Y A+L GD L
Sbjct: 63 DADPAALARVASAVEMIHVYSLVHDDMPCMDDDALRRGKPTVHVAYDEATALLVGDTLQA 122
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG-----EPNLVEFVQ 212
F+ +V+ VP R L ++ +A+A GS GM GQ +DL+ +E +
Sbjct: 123 QAFE-VVASLDAAAVPPARQLTMVRLLAQAAGSNGMCGGQAIDLDSVGLSLTREQLERMH 181
Query: 213 EKKFGEMSECSAVCGGFLAGAD--DDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEE 270
+ K G M S + G LAG D E+++L Y AVG+ +QVVDD+L+A A + +
Sbjct: 182 QLKTGAMLRVSVLLGA-LAGRDLATHELEALDAYSAAVGLAFQVVDDVLDATADSATLGK 240
Query: 271 KKKKKGK----SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
K +YV+ G+E + +AE+LR A E L F GD L D R
Sbjct: 241 TAGKDAADNKPTYVSILGLEPSRALAEQLRRDAHEALAPF---GDKAQRLRELADLIVQR 297
Query: 327 E 327
+
Sbjct: 298 K 298
>gi|291525241|emb|CBK90828.1| Geranylgeranyl pyrophosphate synthase [Eubacterium rectale DSM
17629]
gi|291529300|emb|CBK94886.1| Geranylgeranyl pyrophosphate synthase [Eubacterium rectale M104/1]
Length = 307
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 99/293 (33%), Positives = 152/293 (51%), Gaps = 21/293 (7%)
Query: 50 ITEIDQNLEKAITVKYPEQ--IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPT 107
+ I+ LEK + + +Q I+E+M YSV A G KR P++ +FG + P
Sbjct: 20 VEHINDVLEKFLPAEEGQQRIIFEAMNYSVRA-GGKRLRPILMEETYHMFGGSSAVIEPF 78
Query: 108 ACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHT 167
A+EM+H SL+HDDLP MD+D RRG+ + H VYG + ILAGDAL L ++ +
Sbjct: 79 MAAIEMIHTYSLVHDDLPAMDNDEYRRGKKTTHAVYGEAMGILAGDALLNLAYE-TAAKA 137
Query: 168 PPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN--------LVEFVQEKKFGEM 219
V + RV R A +A+ G GM GQ +D+E E + ++F+ K G +
Sbjct: 138 FDMEVADTRVARAFAVLAKKAGVYGMVGGQVVDVESEKSDDCSITREKLDFIYRLKTGAL 197
Query: 220 SECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQ-----TPRDEEKKKK 274
E S + G LAGA DE+ + + +G+ +Q+ DD+L+ + P ++K
Sbjct: 198 IESSMMIGAILAGASSDEVSRVEQIAAKLGLAFQIQDDVLDVTSTLEVLGKPVGSDEKNN 257
Query: 275 KGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
K +YV F G++KA+ E + +A+E+LD Y D L +Y RE
Sbjct: 258 KA-TYVTFEGLDKAVSDVERISKEAEEQLDDL-GYDDAFLK--ELFEYLIHRE 306
>gi|239627502|ref|ZP_04670533.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239517648|gb|EEQ57514.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 303
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 94/269 (34%), Positives = 146/269 (54%), Gaps = 21/269 (7%)
Query: 57 LEKAITVKYPEQ------IYESMRYSVLAKGTKRAPPVMCVAACELF-GVNRIAAFPTAC 109
+E+ I PE+ I E+M YS++ G KR P++ C LF G + P
Sbjct: 18 IEQLIKTYLPEESGHQKTILEAMNYSMMTGG-KRLRPMLMQEMCRLFTGCLLESVIPFMA 76
Query: 110 ALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPP 169
A+EM+H +SL+HDDLPCMDDD RRG+PS +G DI +L GDAL F+ S
Sbjct: 77 AVEMIHTSSLVHDDLPCMDDDMMRRGKPSTWAEFGEDIGVLTGDALMMYAFETAASAFET 136
Query: 170 HLVPE--PRVLRVIAEIARAVGSTGMAAGQFLDLE--GEP---NLVEFVQEKKFGEMSEC 222
+ P+ R+ + + +AR G GM GQ +D+E G P + ++F+ K G + E
Sbjct: 137 SIDPDELSRIGKAMGILARKTGVYGMIGGQTVDVELAGGPIPKDKLDFIYRLKTGALIEA 196
Query: 223 SAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQ-----TPRDEEKKKKKGK 277
S + G L GA D++ + + R +G+ +Q+ DDIL+ P + ++K KK
Sbjct: 197 SMLIGAVLGGAADEDCKIVESLARKIGMAFQIQDDILDVTGSEEVIGKPVNSDEKNKK-T 255
Query: 278 SYVAFYGVEKAMEVAEELRAKAKEELDRF 306
+YV G++KA + E++ A+A EEL++
Sbjct: 256 TYVTLEGLDKAKKDVEQISAEAIEELNKL 284
>gi|339484559|ref|YP_004696345.1| Polyprenyl synthetase [Nitrosomonas sp. Is79A3]
gi|338806704|gb|AEJ02946.1| Polyprenyl synthetase [Nitrosomonas sp. Is79A3]
Length = 297
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 161/304 (52%), Gaps = 26/304 (8%)
Query: 41 DLKTYWTTLITEIDQNLEKAITVK--YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
D + + ++ I+ LE + PE+++++MRYSVL G KR P++ AA EL
Sbjct: 4 DFQNWTSSCQARIETLLESRLPAADCVPERLHKAMRYSVLGGG-KRVRPLLSFAAGELAL 62
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
+ A A+E++HA SL+HDDLPCMDDD RRG+P+ H + A+L GD+L L
Sbjct: 63 ADTDRVMVVAAAVELIHAYSLVHDDLPCMDDDILRRGKPTCHIEFDEATALLTGDSLQTL 122
Query: 159 GFQHIVSHTPPHLVPEPRV-LRVIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQ 212
F+ + L EP L +IA++A A GS GMA GQ DL+ +EF+
Sbjct: 123 AFELLAEKC---LADEPGTQLEMIAQLAVAAGSRGMAGGQAFDLDSVGKTLSLPELEFMH 179
Query: 213 EKKFGEMSECSAVCGGFLAG-ADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP----- 266
K G + + + G +++++ L + + VG+ +QVVDD+L+ +A T
Sbjct: 180 IHKTGALIRAAVMLGARCNNRLNNNQLGKLDHFAKCVGLAFQVVDDLLDTEATTATLGKT 239
Query: 267 --RDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAA 324
+D E K +YV+ G+ +A E+AE+L+ A + LD F G+ L L D+
Sbjct: 240 AGKDAENNK---PTYVSILGISQARELAEKLQHDAYQALDSF---GEAALRLRQVTDFII 293
Query: 325 DREF 328
R+F
Sbjct: 294 KRKF 297
>gi|288961625|ref|YP_003451935.1| geranyltranstransferase [Azospirillum sp. B510]
gi|288913905|dbj|BAI75391.1| geranyltranstransferase [Azospirillum sp. B510]
Length = 300
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 157/299 (52%), Gaps = 22/299 (7%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAI-----TVKYPE-QIYESMRYSVLAKGTKRAPPVMC 90
++Q DLK+ + EI Q +E I T PE +++E+MRY L G KR P +
Sbjct: 4 TSQSDLKSA----MAEIAQAVELKIGALLPTTDLPEARVFEAMRYGCL-NGGKRLRPFLV 58
Query: 91 VAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAIL 150
+ + LFGVN A A A+EMVH+ SL+HDDLP MDD RRG+P+ H + AIL
Sbjct: 59 MQSSALFGVNPDCAIRAAAAVEMVHSYSLVHDDLPAMDDGELRRGRPTCHRQFDEATAIL 118
Query: 151 AGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF 210
AGD L L F+ +++ H P R +++ +A+A G GM GQ LDL E +
Sbjct: 119 AGDGLLTLAFE-VLADPATHEDPNIRC-QLVTALAKAAGGHGMVGGQMLDLIAEHETFDL 176
Query: 211 -----VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA-- 263
+Q K GEM S GG L A + +LR Y +G+ +Q+VDD+L+ +
Sbjct: 177 GTTTRLQRLKTGEMIAFSCEAGGILGKASPPQRTALRAYAHDLGLAFQIVDDLLDVEGTA 236
Query: 264 -QTPRDEEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+T + + + GK ++V+ G ++A AE L +A + LD F D + + F+
Sbjct: 237 EETGKTVGRDAQAGKATFVSILGRDRARAQAEMLADQAAQHLDIFDGRADMLKAVADFV 295
>gi|339319330|ref|YP_004679025.1| geranyltranstransferase [Candidatus Midichloria mitochondrii
IricVA]
gi|338225455|gb|AEI88339.1| geranyltranstransferase [Candidatus Midichloria mitochondrii
IricVA]
Length = 284
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 153/278 (55%), Gaps = 16/278 (5%)
Query: 52 EIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACAL 111
EID+ L + T K + ++E++RYS ++ +K+ + V ++F VNR + A A+
Sbjct: 18 EIDELLPTSFT-KNADILFEAIRYSAIS-ASKKIRGFLLVKTADIFNVNREQSLKIAAAI 75
Query: 112 EMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHL 171
EM+H SLIHDDLP MDD RRG+PS H +G + ILAGDAL F+ +++ ++
Sbjct: 76 EMIHTYSLIHDDLPAMDDGDYRRGKPSCHKEFGEAMGILAGDALLTYAFE-VIASDQANI 134
Query: 172 VPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE---PNLVEFVQEKKFGEMSECSAVCGG 228
P R+ ++I EI RA+G GM GQ +D+ + + ++ V + K G + E S V G
Sbjct: 135 DPILRI-KIIQEITRAIGIKGMIGGQVIDITSQNMSSDDLKEVHKLKTGALIEASCVAGA 193
Query: 229 FLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVAFYGVEKA 288
+ A DE+ R Y +G+++Q+VDD+++ +E+ ++ + + + K
Sbjct: 194 IMGHASSDEMLVFREYAGKLGLIFQMVDDLID-------EEDDRENANANLLNLMPIVKI 246
Query: 289 MEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
E EEL+ A + L + N+L L I+Y A++
Sbjct: 247 KEEIEELKRAAIQGLKNLNNH--NILILVGLINYIANQ 282
>gi|363893702|ref|ZP_09320797.1| hypothetical protein HMPREF9629_01123 [Eubacteriaceae bacterium
ACC19a]
gi|361963504|gb|EHL16576.1| hypothetical protein HMPREF9629_01123 [Eubacteriaceae bacterium
ACC19a]
Length = 295
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 145/278 (52%), Gaps = 16/278 (5%)
Query: 61 ITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLI 120
I + Y +I +SMRYS L+ G KR P + V + + ++ AC +EM+H SLI
Sbjct: 24 INLTYSSKILDSMRYS-LSAGGKRIRPCIFVEVLKSYNIDVEKYLDVACVIEMIHTYSLI 82
Query: 121 HDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRV 180
HDDLP MD+D RRG+P+NH VYG IAILAGDAL ++ + + + ++
Sbjct: 83 HDDLPAMDNDTLRRGKPTNHMVYGDAIAILAGDALLNFAYELLFKFIKNNF--QINSVKA 140
Query: 181 IAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADD 235
EI+ G GM GQ D+ E + E++ E K ++ S V G+LA AD+
Sbjct: 141 CEEISNCAGIYGMIGGQVSDIINENKDISSGNLEYIHENKTAKLIIASMVSAGYLANADE 200
Query: 236 DEIQSLRRYGRAVGVLYQVVDDILEAKAQTP---RDEEKKKKKGK-SYVAFYGVEKAMEV 291
++++ LR+Y +G+ +Q+ DDIL+ + K +GK +Y ++G+EK+
Sbjct: 201 NDMEHLRKYAYNLGMAFQISDDILDIIGNEKLLGKSVGKDVDEGKNTYPKYFGIEKS--- 257
Query: 292 AEELRAKAKEELDRFKKYGDNVLPLYS-FIDYAADREF 328
E+L +D + D + ++ Y +R++
Sbjct: 258 KEKLNGYVNSAIDEISEIKDKDMSFFAQLATYIGNRKY 295
>gi|434382488|ref|YP_006704271.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli WesB]
gi|404431137|emb|CCG57183.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli WesB]
Length = 295
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 96/285 (33%), Positives = 154/285 (54%), Gaps = 20/285 (7%)
Query: 40 FDLKTYWTTLITEID---QNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
+LK Y + +ID N+ K+ ++ + ++Y + A G KR P++ ACEL
Sbjct: 1 MNLKEYMNIRLKDIDSEINNIFKSSSISLENNFLDMLKYPLDA-GGKRLRPILTCLACEL 59
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
F + A A +LE++H SL+HDDLP MD+D RRG+P+ H YG AIL GD LF
Sbjct: 60 FNGDYKKAIIPAVSLELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGLF 119
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----V 211
F+ I+S+ V + + +++ EI+ A G +GM GQF+DL E ++F +
Sbjct: 120 THSFE-ILSNAN---VNDKTLRKLLYEISYAAGVSGMVMGQFIDLYYEERDIDFEMLKIL 175
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP---RD 268
KK G M + G + ++ ++++ +YG A+G+ +Q+ DDIL+ + +
Sbjct: 176 HSKKTGAMIRGAVRVGAIASEKENINLENITKYGEAIGLAFQIQDDILDVISDNETLGKT 235
Query: 269 EEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDN 312
K +K+GK +YV +G+E A E A E +KE +D Y DN
Sbjct: 236 VGKDEKEGKLTYVKQFGLEGAKEKAME---TSKEAIDYLNVYDDN 277
>gi|311105029|ref|YP_003977882.1| geranyltranstransferase [Achromobacter xylosoxidans A8]
gi|310759718|gb|ADP15167.1| geranyltranstransferase [Achromobacter xylosoxidans A8]
Length = 303
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 147/277 (53%), Gaps = 34/277 (12%)
Query: 66 PEQIYESMRYSVLAKGTK-RAPPVMCVA-ACELFG--------VNRIAAFPTACALEMVH 115
P +++E+MRY+VL G + RA V AC + G ++R AA A+E++H
Sbjct: 34 PSRLHEAMRYAVLGGGKRVRAALVYAAGQACPVSGSVLAVQASLDRAAA-----AVELIH 88
Query: 116 AASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSH-TPPHLVPE 174
A SL+HDDLPCMDDD RRG+P+ H + A+LAGDAL PL F + S P L
Sbjct: 89 AYSLVHDDLPCMDDDTLRRGRPTTHVKFDEATAMLAGDALQPLAFDLLASMPIAPAL--- 145
Query: 175 PRVLRVIAEIARAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGF 229
+++ +ARA GS GMA GQ +DL + ++ + K G M CS GG
Sbjct: 146 --IVQATQSLARAAGSQGMAGGQAIDLFSVGHALSRDELQTMHSMKTGAMLACSVALGGI 203
Query: 230 LAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA------QTPRDEEKKKKKGKSYVAFY 283
+AGA Q+L Y +AVG+ +QVVDDIL+ A +TP + + K +YV+
Sbjct: 204 VAGASSASRQALDAYAQAVGLAFQVVDDILDVTADSTSLGKTPGKDAAENK--PTYVSLL 261
Query: 284 GVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
G++ A A+ELR A L + G + L FI
Sbjct: 262 GLDGARAFAQELREDALAALAPLGEAGSRLAELADFI 298
>gi|402836862|ref|ZP_10885393.1| polyprenyl synthetase [Mogibacterium sp. CM50]
gi|402269878|gb|EJU19147.1| polyprenyl synthetase [Mogibacterium sp. CM50]
Length = 297
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 92/254 (36%), Positives = 134/254 (52%), Gaps = 19/254 (7%)
Query: 69 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMD 128
+++SM+YSV++ G KR PVM +AACE G + A P ACALE +H SLIHDDLP MD
Sbjct: 29 LFDSMKYSVMSGG-KRLRPVMLLAACEFSGGDIYEALPFACALEYIHTYSLIHDDLPAMD 87
Query: 129 DDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLR---VIAEIA 185
+D RRG P+NH V+G DIA+L GDAL + + ++ R IA
Sbjct: 88 NDDLRRGNPTNHKVFGEDIAVLGGDALLNTAMEVMFRDLTYFFDDSEKLKRHSCAGLTIA 147
Query: 186 RAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G TGM AGQ +D+E V+F++E K G + + G + GAD + I +
Sbjct: 148 KAAGVTGMIAGQVVDVENGMDDCSQEFVDFIEENKTGALIAAPVIAGLGIGGADKEMIDA 207
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAE 293
Y R +G +Q+ DDIL+ T +E K GK ++ G++ A
Sbjct: 208 FTVYSRCIGKAFQISDDILD---MTGSVDELGKTPGKDSHHERANFALVNGIDSARAELH 264
Query: 294 ELRAKAKEELDRFK 307
L A E +++++
Sbjct: 265 TLTMSAIESIEKYE 278
>gi|221065759|ref|ZP_03541864.1| Polyprenyl synthetase [Comamonas testosteroni KF-1]
gi|220710782|gb|EED66150.1| Polyprenyl synthetase [Comamonas testosteroni KF-1]
Length = 324
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 94/278 (33%), Positives = 142/278 (51%), Gaps = 13/278 (4%)
Query: 38 TQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
T D + + ++ L + + + P + E+MRY+VL G KR P++ AA E
Sbjct: 29 TALDFSVWMQERLVRTEEALSRWVGINAPAGLGEAMRYAVL-DGGKRLRPLLVWAAAEAV 87
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G A CA+E++HA SL+HDD+PCMD+D RRG+P+ H +G A+LAGDAL
Sbjct: 88 GGQAAATLRAGCAVELIHAYSLVHDDMPCMDNDTMRRGKPTVHVQFGEASALLAGDALQA 147
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEKKFG 217
L F+ ++ +P R+ + A GS GMA GQ +DL + Q ++
Sbjct: 148 LAFELLLPEDDG--IPCSMQARLCRLLGAAAGSHGMAGGQAIDLASVGKQLSETQLREMH 205
Query: 218 EMSECSAVCGGFLAGA------DDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
+ + + G L GA D + +L YG+A+GV +QVVDDIL+ A + +
Sbjct: 206 RLKTGALLLGSVLMGAACNAQTDARALAALTDYGQALGVAFQVVDDILDVVADSATLGKT 265
Query: 272 KKKKGK----SYVAFYGVEKAMEVAEELRAKAKEELDR 305
K ++V+ G+E A AEELR +A L R
Sbjct: 266 AGKDAANDKPTFVSLLGLEAARAHAEELRLQAHAALTR 303
>gi|145298029|ref|YP_001140870.1| geranyltranstransferase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|418361767|ref|ZP_12962414.1| geranyltranstransferase [Aeromonas salmonicida subsp. salmonicida
01-B526]
gi|142850801|gb|ABO89122.1| geranyltranstransferase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|356686883|gb|EHI51473.1| geranyltranstransferase [Aeromonas salmonicida subsp. salmonicida
01-B526]
Length = 296
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 101/270 (37%), Positives = 143/270 (52%), Gaps = 17/270 (6%)
Query: 68 QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCM 127
++ ++MRY +L G KR P + A E+ GV R A A+E +HA SL+HDDLP M
Sbjct: 31 RLRDAMRYGLLLGG-KRVRPFLVYAVGEMLGVKRELLDGPAAAVECIHAYSLLHDDLPAM 89
Query: 128 DDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARA 187
D+D RRGQP+ H + AILAGDAL L F + H P + RV R+++ +ARA
Sbjct: 90 DNDDLRRGQPTVHKAFDEGTAILAGDALQTLAFSILADHPLPDRLLANRV-RMLSTLARA 148
Query: 188 VGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFL-AGADDDEIQSL 241
G GM GQ LDL+ E + E V K G + EC+ G A DD + +L
Sbjct: 149 SGYLGMCGGQALDLQAEGRQISLPELEQVHRHKTGALIECAVALGALCKADVDDTTLAAL 208
Query: 242 RRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYVAFYGVEKAMEVAEELR 296
+ Y A+G+ +QV DDIL+ T P+ + ++K +Y A G++ A E+A EL
Sbjct: 209 QTYAAAIGLAFQVQDDILDITGDTVTLGKPQGSDLAQEK-STYPALLGLDNARELARELH 267
Query: 297 AKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
KA L Y ++L +F DY +R
Sbjct: 268 GKALTALQSL-PYNTDILE--AFADYIIER 294
>gi|56420928|ref|YP_148246.1| geranyltranstransferase [Geobacillus kaustophilus HTA426]
gi|47076820|dbj|BAD18360.1| geranyltranstransferase [Geobacillus kaustophilus]
gi|56380770|dbj|BAD76678.1| geranyltranstransferase (farnesyl-diphosphate synthase)
[Geobacillus kaustophilus HTA426]
Length = 297
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 84/218 (38%), Positives = 125/218 (57%), Gaps = 11/218 (5%)
Query: 63 VKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHD 122
++ PE + ++M YS L G KR P++ +A + G + P ACA+EM+H SLIHD
Sbjct: 28 LRGPETLKKAMAYS-LEAGGKRIRPLLLLATIQALGKDPAIGLPVACAIEMIHTYSLIHD 86
Query: 123 DLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIA 182
DLP MD+D RRG+P+NH V+G +AILAGDAL FQ +++ VP L++I
Sbjct: 87 DLPSMDNDDLRRGKPTNHKVFGEAMAILAGDALLTYAFQ-LIAEVDDDRVPPSVRLQLIE 145
Query: 183 EIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCGGFLAGADDDE 237
++A+A G GM AGQ D+E E +E++ K G+M + S G L GAD +
Sbjct: 146 QLAKAAGPEGMVAGQAADMEAEGKTLALAELEYIHRHKTGKMLQYSVHAGALLGGADGRQ 205
Query: 238 IQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKK 275
+ L + +G+ +Q+ DDIL+ + EEK K+
Sbjct: 206 TRELNEFAAHLGLAFQIRDDILDIEGM----EEKIGKR 239
>gi|375009473|ref|YP_004983106.1| geranyltranstransferase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359288322|gb|AEV20006.1| Geranyltranstransferase [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 297
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 84/218 (38%), Positives = 125/218 (57%), Gaps = 11/218 (5%)
Query: 63 VKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHD 122
++ PE + ++M YS L G KR P++ +A + G + P ACA+EM+H SLIHD
Sbjct: 28 LRGPETLKKAMAYS-LEAGGKRIRPLLLLATIQALGKDPAIGLPVACAIEMIHTYSLIHD 86
Query: 123 DLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIA 182
DLP MD+D RRG+P+NH V+G +AILAGDAL FQ +++ VP L++I
Sbjct: 87 DLPSMDNDDLRRGKPTNHKVFGEAMAILAGDALLTYAFQ-LIAEVDDDRVPPSVRLQLIE 145
Query: 183 EIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCGGFLAGADDDE 237
++A+A G GM AGQ D+E E +E++ K G+M + S G L GAD +
Sbjct: 146 QLAKAAGPEGMVAGQAADMEAEGKTLALAELEYIHRHKTGKMLQYSVHAGALLGGADGRQ 205
Query: 238 IQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKK 275
+ L + +G+ +Q+ DDIL+ + EEK K+
Sbjct: 206 TRELNEFAAHLGLAFQIRDDILDIEGM----EEKIGKR 239
>gi|313896583|ref|ZP_07830132.1| geranyltranstransferase [Selenomonas sp. oral taxon 137 str. F0430]
gi|312974768|gb|EFR40234.1| geranyltranstransferase [Selenomonas sp. oral taxon 137 str. F0430]
Length = 295
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 101/299 (33%), Positives = 152/299 (50%), Gaps = 20/299 (6%)
Query: 41 DLKTYWTTLITEIDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
++K W + T +++ L+ + T +++ SM YS++A G KR P++ +AA + G
Sbjct: 4 EMKELWQSRRTLVERALQAELDRTDILDDKLRASMAYSLMAGG-KRLRPILLMAAADAVG 62
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
+ ACALEM+H SLIHDDLP MD+D RRG+ +NH Y AILAGDAL L
Sbjct: 63 ADGTKFITAACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKAYDEGTAILAGDALLTL 122
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----VQE 213
F I+ VP R+LR++ EI+R+ G+ GM GQ LDLE E + V
Sbjct: 123 AFTVILRQQD---VPAERLLRIVDEISRSAGAEGMVGGQMLDLEAENRRISMEELQRVHM 179
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK-- 271
K G + + G LAGA + ++ +L Y G+ +Q+ DDIL+ T D K
Sbjct: 180 GKTGALFRAALRSGAILAGASEQQLAALTTYADHFGLAFQITDDILDVVG-TAEDIGKPV 238
Query: 272 ---KKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+K +YV +++A +A R + +D +GD L + Y R+
Sbjct: 239 GSDEKNHKSTYVTLTSLDEAQSLA---RQTVESAVDALHIFGDEAAFLRELVLYLVRRK 294
>gi|359798545|ref|ZP_09301116.1| geranyltranstransferase [Achromobacter arsenitoxydans SY8]
gi|359363367|gb|EHK65093.1| geranyltranstransferase [Achromobacter arsenitoxydans SY8]
Length = 303
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/272 (38%), Positives = 146/272 (53%), Gaps = 24/272 (8%)
Query: 66 PEQIYESMRYSVLAKGTK-RAPPVMCVA-ACELFG-VNRIAAF--PTACALEMVHAASLI 120
P +++E+MRY+VL G + RA V AC + G V I A A A+E++HA SL+
Sbjct: 34 PSRLHEAMRYAVLGGGKRVRAALVYAAGQACPVSGSVLAIEASLDRAAAAVELIHAYSLV 93
Query: 121 HDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSH-TPPHLVPEPRVLR 179
HDDLPCMDDD RRG+P+ H + A+LAGDAL PL F+ + S P L +++
Sbjct: 94 HDDLPCMDDDTLRRGRPTTHVQFDEATAMLAGDALQPLAFELLASMPIAPAL-----IVQ 148
Query: 180 VIAEIARAVGSTGMAAGQFLDL-----EGEPNLVEFVQEKKFGEMSECSAVCGGFLAGAD 234
+ARA GS GMA GQ +DL + ++ + K G M CS GG +AGA
Sbjct: 149 ATQSLARAAGSQGMAGGQAIDLFSVGRSLSRDELQMMHGMKTGAMLACSVALGGIVAGAS 208
Query: 235 DDEIQSLRRYGRAVGVLYQVVDDILEAKA------QTPRDEEKKKKKGKSYVAFYGVEKA 288
Q+L Y +AVG+ +QVVDDIL+ A +TP + + K +YV+ G+ +A
Sbjct: 209 SASRQALDAYAQAVGLAFQVVDDILDVTADSASLGKTPGKDAAENK--PTYVSLLGLSEA 266
Query: 289 MEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
A ELR A + L G + L FI
Sbjct: 267 RAFAGELREAALDALAPLGDAGARLAQLADFI 298
>gi|415885447|ref|ZP_11547375.1| Polyprenyl synthetase [Bacillus methanolicus MGA3]
gi|387591116|gb|EIJ83435.1| Polyprenyl synthetase [Bacillus methanolicus MGA3]
Length = 296
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 119/204 (58%), Gaps = 7/204 (3%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P I ESM YS+ A G KR P++ A FG + TA A+EM+H SLIHDDLP
Sbjct: 30 PSIIKESMLYSLEA-GGKRIRPLLLFATLHAFGKDSKKGLHTAAAIEMIHTYSLIHDDLP 88
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
MD+D RRG+P+NH V+G A+LAGDAL FQ ++ TP L++I E++
Sbjct: 89 SMDNDDFRRGKPTNHKVFGEAFAVLAGDALLTYSFQ-LICETPEEYAAADIKLKLIRELS 147
Query: 186 RAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G+ GM GQ D+EGE +E++ K G++ S + G LA A+ ++I+
Sbjct: 148 KAAGAEGMVGGQVADIEGEGKQLHLTQLEYIHHHKTGKLLAYSVLAGAILARANVEQIKV 207
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQ 264
L ++ +G+ +Q+ DDIL+ + Q
Sbjct: 208 LSQFAFHLGLAFQIRDDILDLEGQ 231
>gi|402571586|ref|YP_006620929.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus meridiei
DSM 13257]
gi|402252783|gb|AFQ43058.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus meridiei
DSM 13257]
Length = 288
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/259 (38%), Positives = 141/259 (54%), Gaps = 17/259 (6%)
Query: 71 ESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDD 130
ESM YS++ G KR PV+ +A+ E G + A ALE++H SLIHDDLP MD+D
Sbjct: 29 ESMYYSLIG-GGKRIRPVLALASAEAVGGKPESILRAAAALELIHTYSLIHDDLPAMDND 87
Query: 131 PSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGS 190
RRG+ +NH +YG AILAGDAL F+ + S PE R LR+I E+A A G
Sbjct: 88 DYRRGRLANHKIYGEAGAILAGDALLTYAFELLASLELGQ--PE-RELRIIREVAVASGK 144
Query: 191 TGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYG 245
GM GQ D+ E + +E + + K G + SA GG L G +D+IQ+L Y
Sbjct: 145 DGMVRGQVADITAEGKVLTLPEIEEIHKGKTGAILTVSARLGGVLGGGSEDDIQALTDYA 204
Query: 246 RAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAK 300
+A+G+ +Q+ DDIL+ + P + ++ K +YV+ G+E A E KA+
Sbjct: 205 QALGLAFQIKDDILDVIGDSETLGKPAGSDLRQGK-STYVSLLGLEGASEELHSQILKAQ 263
Query: 301 EELDRFKKYGD--NVLPLY 317
+ F + G+ N L LY
Sbjct: 264 AAIKPFGQKGNFLNELALY 282
>gi|308081287|ref|NP_001183931.1| putative geranylgeranyl pyrophosphate synthase 3 [Zea mays]
gi|148535923|gb|ABQ85648.1| putative geranylgeranyl pyrophosphate synthase 3 [Zea mays]
gi|413947066|gb|AFW79715.1| putative geranylgeranyl pyrophosphate synthase 3 [Zea mays]
Length = 363
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 123/307 (40%), Positives = 168/307 (54%), Gaps = 22/307 (7%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAIT-VKYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
T FD ++Y + + L+ + ++ PE + ESMRYSVLA G KR PV+ +AACE
Sbjct: 62 GTSFDFESYLSAKARAVHDALDLTLQGLRCPEVLSESMRYSVLAGG-KRLRPVLAIAACE 120
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
L G AA P ACA+EM+H ASLIHDD+PCMDDD RRG+PSNH +G A+LAGDAL
Sbjct: 121 LVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDAL 180
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPN------L 207
L F+H+ + VP R LR + E+ G G+AAGQ D+ EG P+
Sbjct: 181 LALAFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLGA 240
Query: 208 VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPR 267
+E++ K + E +AV G + G D E++ +RRY +G+L QVVDD+L+ T
Sbjct: 241 LEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDV---TGT 297
Query: 268 DEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
E+ K GK +Y G++ A EL AKA+ ELD PL
Sbjct: 298 SEQLGKTAGKDVAAGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAA--RTAPLRHLA 355
Query: 321 DYAADRE 327
+ A R+
Sbjct: 356 RFMAHRQ 362
>gi|390959330|ref|YP_006423087.1| geranylgeranyl pyrophosphate synthase [Terriglobus roseus DSM
18391]
gi|390414248|gb|AFL89752.1| geranylgeranyl pyrophosphate synthase [Terriglobus roseus DSM
18391]
Length = 303
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/282 (35%), Positives = 141/282 (50%), Gaps = 21/282 (7%)
Query: 48 TLITEIDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAF 105
T I D LE+ + T P I+ +MR+SV A G + P ++ +A + G A
Sbjct: 11 TGIALTDAALERLLPGTATQPHNIHRAMRHSVFAGGKRLRPLLVIESARMIAGDLPDGAA 70
Query: 106 PTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVS 165
A+EM+H SLIHDDLP +D+D RRG+P+ H VYG +AILAGDAL L ++ +
Sbjct: 71 DVGAAIEMLHTYSLIHDDLPALDNDDLRRGKPTCHVVYGEAMAILAGDALQTLAYETLAK 130
Query: 166 HTPPHLVPEPRVLRVIAEIARAVGSTGMA----AGQFLDLEGE-----PNLVEFVQEKKF 216
+ V V VGS G+A GQ +D+EGE LVE + K
Sbjct: 131 LSGDAAAKIEIVKEVAIATGTGVGSEGLAPGMIGGQVMDIEGEGQKPTAELVEAIHRSKT 190
Query: 217 GEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG 276
G + S V GG + GA DE+ LRR+G+ G+ +Q+VDDIL+ T E K G
Sbjct: 191 GALITVSIVAGGLIGGASADEVMHLRRFGQRAGLAFQIVDDILDV---TQSSAELGKTAG 247
Query: 277 K-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGD 311
K ++ A +G++ + E A EL EL F D
Sbjct: 248 KDTASDKATWPAVFGLDASRETAAELLRDGLAELAGFGARAD 289
>gi|365873737|ref|ZP_09413270.1| geranylgeranyl pyrophosphate synthase [Thermanaerovibrio velox DSM
12556]
gi|363983824|gb|EHM10031.1| geranylgeranyl pyrophosphate synthase [Thermanaerovibrio velox DSM
12556]
Length = 304
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/279 (35%), Positives = 156/279 (55%), Gaps = 16/279 (5%)
Query: 37 STQFDLKTYWTTLITEID---QNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAA 93
S+ +L Y + E++ + + ++ P +++ SM YS L+ G KR P++C+A
Sbjct: 11 SSMEELNLYMRHVGDEVECEIKAINSSLPSDMPNRLWSSMDYS-LSGGGKRLRPILCMAT 69
Query: 94 CELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGD 153
E FGV+R P A A EMVH ASLIHDDLPCMD+D RRG+P+NH YG +A+LAGD
Sbjct: 70 AEAFGVSRKDVMPMALAYEMVHTASLIHDDLPCMDNDDMRRGRPTNHKAYGEALALLAGD 129
Query: 154 ALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE---PNL--- 207
AL FQ+ + + P +L + +ARA G G+ GQ +D+ E NL
Sbjct: 130 ALLAWAFQYAIDGLRENRFPSDLILAAVLSLARATGPEGICGGQSMDMGFELEVNNLDPV 189
Query: 208 --VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT 265
V V K G + + G LA A+++++ L+ YG ++GV +QV DDIL+ ++
Sbjct: 190 DRVLRVATYKTGVLISSALESGAILANANEEDLLKLKNYGISLGVAFQVADDILDVIGKS 249
Query: 266 P---RDEEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAK 300
+ K + +GK ++V+ +G++ A + +L KAK
Sbjct: 250 EDLGKTAGKDQAQGKTTFVSVHGIDGARRILADLSDKAK 288
>gi|308274743|emb|CBX31342.1| Geranylgeranyl pyrophosphate synthetase, chloroplastic [uncultured
Desulfobacterium sp.]
Length = 316
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 152/302 (50%), Gaps = 16/302 (5%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVKYP-EQIYESMRYSVLAKGTKRAPPVMCVAACE 95
S FDL++Y+ I L I Q+ ++M YS++++G KR P++C+AA E
Sbjct: 19 SIDFDLESYFAEKTKTIKNELINIINKSNSFGQLSKAMEYSLISEG-KRIRPILCIAAAE 77
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
G + P ACA+E++H SLIHDDLP +D+D RRG+P+ H + AILAGDAL
Sbjct: 78 SVGGKQSDVLPAACAIEIIHTYSLIHDDLPAIDNDLLRRGKPTCHAAFNEATAILAGDAL 137
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP-----NLVEF 210
L FQ + + + L++I I+ A G GM GQ D+ E N +E
Sbjct: 138 LTLAFQVLSEFELHNNTNALKWLKIINLISTAAGYMGMIEGQMRDIASENTQILLNKLEE 197
Query: 211 VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQ-----T 265
+ K G + S G LA A D+I+ L+ Y + +G+ +Q+ DD+L A
Sbjct: 198 LHILKTGALIVASVESGAILANASLDQIKQLKIYAKKIGLAFQIADDLLNAMGDPTITGK 257
Query: 266 PRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAAD 325
P + +KK +Y + G++++ A++L +A L F D PL + Y +
Sbjct: 258 PVGTDNVRKKS-TYPSLLGIDESENYAKKLIKEALHALAIFDNKSD---PLRAIALYIIE 313
Query: 326 RE 327
R
Sbjct: 314 RN 315
>gi|389818539|ref|ZP_10208820.1| geranyltranstransferase [Planococcus antarcticus DSM 14505]
gi|388463822|gb|EIM06165.1| geranyltranstransferase [Planococcus antarcticus DSM 14505]
Length = 293
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/243 (38%), Positives = 139/243 (57%), Gaps = 15/243 (6%)
Query: 41 DLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAAC-ELFGV 99
+ +T++ LI + + E+ +++ P + ESM YS+ A G KR P++ +A EL G
Sbjct: 5 EFRTHYEPLIQQ--EMAEQILSLSIPNSLKESMHYSLQAGG-KRIRPILLLAVLHELSGQ 61
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A A A+EM+H SLIHDDLP MD+D RRG P+NH V+G +AILAGDAL
Sbjct: 62 EHPDALKVAAAIEMIHTYSLIHDDLPSMDNDDLRRGMPTNHKVFGEAVAILAGDALLTYS 121
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEK 214
F IV+ H+ + +V R++ ++ + G+ GM GQ LD+EGE +E V
Sbjct: 122 FG-IVARL-QHVSSDDKV-RLMDLMSVSSGAEGMVGGQVLDIEGEEKKLTLEELEQVHRL 178
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKK 274
K G + S + GG LA A ++EI +L R+G +G+ +Q+ DDIL+ T +E K
Sbjct: 179 KTGALLTYSILAGGILAQASNEEILALSRFGEHIGLAFQIQDDILDV---TGTSQELGKT 235
Query: 275 KGK 277
GK
Sbjct: 236 AGK 238
>gi|337746949|ref|YP_004641111.1| polyprenyl synthetase [Paenibacillus mucilaginosus KNP414]
gi|336298138|gb|AEI41241.1| polyprenyl synthetase [Paenibacillus mucilaginosus KNP414]
Length = 301
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/271 (37%), Positives = 148/271 (54%), Gaps = 14/271 (5%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKY--PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
+K Y L I+ L+ ++ ++ P + ES+ YS++A G KR P++ +AA E
Sbjct: 7 IKEYIAALAGRIEDELKTSLPEQWSVPGALRESVMYSLMA-GGKRLRPILVLAAAEALQG 65
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
AA P A A+EM+H SLIHDDLP MD+D RRG+ +NH VYG +AILAGDAL
Sbjct: 66 RAEAAMPAALAVEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEAMAILAGDALLTHA 125
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEK 214
F V H VP V+ ++ E+A+ G+ GM GQ D+ GE L +E++
Sbjct: 126 FHTAVQAARRHGVPADVVVDIVEELAKLAGAPGMVGGQAADMLGEQGLTKLEELEYIHLH 185
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL-----EAKAQTPRDE 269
K ++ S GG +AGA ++ +L R+G +G+ +Q+ DDIL E K P
Sbjct: 186 KTSDLIVFSLKAGGRIAGATSTQLDALERFGTCIGLAFQIQDDILDLIGDEQKLGKPVQS 245
Query: 270 EKKKKKGKSYVAFYGVEKAMEVAEELRAKAK 300
+ K+ K +Y F G+E + EL A+AK
Sbjct: 246 DVKQGK-VTYPYFIGIEASEAKVAELTAEAK 275
>gi|210615786|ref|ZP_03290767.1| hypothetical protein CLONEX_02985 [Clostridium nexile DSM 1787]
gi|210150122|gb|EEA81131.1| hypothetical protein CLONEX_02985 [Clostridium nexile DSM 1787]
Length = 296
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/265 (35%), Positives = 145/265 (54%), Gaps = 20/265 (7%)
Query: 50 ITEIDQNLEKAITVK--YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPT 107
IT I+Q L+K + VK ++I E+M YS+LA G KR P++ LFG + P
Sbjct: 11 ITAIEQILKKYLPVKEGLQKEIMEAMEYSLLA-GGKRLRPMLMRETYVLFGGDEELIEPF 69
Query: 108 ACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIV--- 164
A+EM+H SL+HDDLP MD+D RRG+ + H VYG + ILAGDAL F+ V
Sbjct: 70 MAAIEMIHTYSLVHDDLPAMDNDDYRRGRKTTHVVYGEAMGILAGDALLNFAFETAVKAF 129
Query: 165 SHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEM 219
+ P + + +R+++E A G GM GQ +D++ +++F+ E K +
Sbjct: 130 AMCPQKSIEIGQAMRILSEKA---GIYGMIGGQVVDVKSAGQAVSKEVLDFIYELKTSAL 186
Query: 220 SECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKK 274
EC+ + G LAGA + E+Q + + + VGV +Q+ DDIL+ + P ++K +
Sbjct: 187 IECAMMIGAVLAGASETEVQKIEQIAKYVGVAFQIQDDILDVTSTVEVLGKPIHSDEKNE 246
Query: 275 KGKSYVAFYGVEKAMEVAEELRAKA 299
K +YV G+E A E E L +A
Sbjct: 247 K-TTYVTLLGIENAKEAVESLSMEA 270
>gi|421838068|ref|ZP_16272058.1| geranyltranstransferase, partial [Clostridium botulinum
CFSAN001627]
gi|409739634|gb|EKN40262.1| geranyltranstransferase, partial [Clostridium botulinum
CFSAN001627]
Length = 262
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/264 (34%), Positives = 142/264 (53%), Gaps = 19/264 (7%)
Query: 69 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMD 128
IYE+M YS+ A G KR PV+ + L+ + A P A A+EM+H SLIHDDLP MD
Sbjct: 1 IYEAMAYSLEA-GGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMD 59
Query: 129 DDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAV 188
+D RRG+P+NH ++G IAILAGDAL + ++ L + ++ IA+A
Sbjct: 60 NDDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYS---LKNGEKAVKACYTIAKAA 116
Query: 189 GSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRR 243
G GM GQ +D+ E + ++ +K+ G + + S + G L A +I+ L
Sbjct: 117 GVDGMIGGQVVDILSEDKSIPLDELYYMHKKRTGALIKASILAGAILGSATYTDIELLGE 176
Query: 244 YGRAVGVLYQVVDDILEAKA-------QTPRDEEKKKKKGKSYVAFYGVEKAMEVAEELR 296
YG +G+ +Q+ DDIL+ + +T DE+ K ++V YG+EK E+ E+
Sbjct: 177 YGDNLGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHK---TTFVKVYGIEKCNELCTEMT 233
Query: 297 AKAKEELDRFKKYGDNVLPLYSFI 320
K + L++ KK D + + F+
Sbjct: 234 NKCFDILNKIKKNTDKLKEITMFL 257
>gi|307105633|gb|EFN53881.1| hypothetical protein CHLNCDRAFT_31906 [Chlorella variabilis]
Length = 304
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/299 (33%), Positives = 147/299 (49%), Gaps = 73/299 (24%)
Query: 38 TQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
T FD + Y T ID L+K++ ++YPE I ESMRYS+LA
Sbjct: 59 TAFDFQQYMKERATLIDAALDKSVPLQYPEIINESMRYSLLA------------------ 100
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
RRG+P+NH VYG +IAILAGDAL
Sbjct: 101 ----------------------------------GRRGKPTNHKVYGEEIAILAGDALLS 126
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP-------NLVEF 210
L F++I T V RVL+VI E+ +AVGS G+ AGQ +D++ E + +++
Sbjct: 127 LSFEYIARETRG--VAADRVLQVIVEVGKAVGSEGLVAGQAVDIKSEGAGESVGLDTLQY 184
Query: 211 VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEE 270
+ E K + E + V G L GA + ++ LR+Y R++G+ +QVVDDIL+ A T EE
Sbjct: 185 IHEHKTAVLLEAAVVSGAILGGATEVDVDRLRKYSRSIGLAFQVVDDILDITATT---EE 241
Query: 271 KKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
K GK +Y + G+E++ E+A+EL +AK L + PLY+ +Y
Sbjct: 242 LGKTAGKDLASAKTTYPSLVGLERSREIADELIEEAKSMLTTYDPA--RAAPLYALAEY 298
>gi|429765588|ref|ZP_19297873.1| putative geranyltranstransferase [Clostridium celatum DSM 1785]
gi|429186039|gb|EKY27002.1| putative geranyltranstransferase [Clostridium celatum DSM 1785]
Length = 291
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 126/234 (53%), Gaps = 18/234 (7%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
Y + IY+S YS+ G KR P++ + ++ A A+EM+H SLIHDDL
Sbjct: 25 YNKIIYDSASYSI-NIGGKRIRPILMILTYSMYKDKWKDIIEVASAIEMIHTYSLIHDDL 83
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
PCMD+D RRG+P+NH VYG DIA+LAGDAL ++ ++ + L +I
Sbjct: 84 PCMDNDDLRRGKPTNHKVYGEDIAVLAGDALLNEAMTLMIKYSLNSV--NKNALLATYKI 141
Query: 185 ARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
+ A G GM AGQ +D+ E + +++ KK GE+ + S V G L A ++E+
Sbjct: 142 SEAAGMNGMIAGQIVDIINEGKKISADELKYMHAKKTGELIKVSIVAGALLGDAKEEEVS 201
Query: 240 SLRRYGRAVGVLYQVVDDILEAKAQTPR-------DEEKKKKKGKSYVAFYGVE 286
L +G +G+ +Q+ DDIL+ T + DEE K ++++ YG+E
Sbjct: 202 KLEVFGEKLGLAFQIKDDILDVIGSTEKLGKTVLSDEENNK---TNFISMYGLE 252
>gi|398803633|ref|ZP_10562651.1| geranylgeranyl pyrophosphate synthase [Polaromonas sp. CF318]
gi|398095886|gb|EJL86217.1| geranylgeranyl pyrophosphate synthase [Polaromonas sp. CF318]
Length = 306
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/249 (38%), Positives = 139/249 (55%), Gaps = 14/249 (5%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + ++MRY+VL G KR P++ +AACE G NR AA ACA+E++HA SL+HDD+P
Sbjct: 40 PAGLGDAMRYAVL-DGGKRLRPLLVMAACEAVGGNREAALRAACAVELIHAYSLVHDDMP 98
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPP-HLVPEPRVLRVIAEI 184
CMD+D RRG+P+ H +G A+LAGDAL L F+ + + R+ R++A+
Sbjct: 99 CMDNDVLRRGKPTVHVKFGQAQALLAGDALQALAFEFLTPEDGSVDAATQARLCRMLAQ- 157
Query: 185 ARAVGSTGMAAGQFLDLE--GEPNLVEFVQEK---KFGEMSECSAVCGGFLAGADDDEIQ 239
A G GMA GQ +DL G P + + E K G + E S + G Q
Sbjct: 158 --AAGFQGMAGGQAIDLASVGMPLDSQQLHEMHRLKTGALLEASVMMGAACGTVAPAAWQ 215
Query: 240 SLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK----SYVAFYGVEKAMEVAEEL 295
+LR YG AVG+ +QVVDDIL+ A + + K ++V+ G+E + A++L
Sbjct: 216 ALRDYGSAVGLAFQVVDDILDVTADSATLGKTAGKDAAQDKPTFVSLMGLEASKAYAQQL 275
Query: 296 RAKAKEELD 304
A+A LD
Sbjct: 276 LARALAGLD 284
>gi|422322210|ref|ZP_16403252.1| geranyltranstransferase [Achromobacter xylosoxidans C54]
gi|317402859|gb|EFV83401.1| geranyltranstransferase [Achromobacter xylosoxidans C54]
Length = 303
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 148/277 (53%), Gaps = 34/277 (12%)
Query: 66 PEQIYESMRYSVLAKGTK-RAPPVMCVA-ACELFG--------VNRIAAFPTACALEMVH 115
P +++E+MRY+VL G + RA V AC + G ++R AA A+E++H
Sbjct: 34 PARLHEAMRYAVLGGGKRVRAALVYAAGQACPVSGSVLAVEASLDRAAA-----AVELIH 88
Query: 116 AASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSH-TPPHLVPE 174
A SL+HDDLPCMDDD RRG+P+ H + A+LAGDAL PL F+ + S P L
Sbjct: 89 AYSLVHDDLPCMDDDVLRRGRPTTHVQFDEATAMLAGDALQPLAFELLASMPIAPAL--- 145
Query: 175 PRVLRVIAEIARAVGSTGMAAGQFLDL-----EGEPNLVEFVQEKKFGEMSECSAVCGGF 229
+++ +ARA GS GMA GQ +DL + ++ + K G M CS GG
Sbjct: 146 --IVQATQSLARAAGSQGMAGGQAIDLFSVGRSLSRDDLQLMHSMKTGAMLACSVALGGI 203
Query: 230 LAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA------QTPRDEEKKKKKGKSYVAFY 283
+AGA Q+L Y +A+G+ +QVVDDIL+ A +TP + + K +YV+
Sbjct: 204 VAGASSASRQALDVYAQAMGLAFQVVDDILDVTADSASLGKTPGKDAAENK--PTYVSLL 261
Query: 284 GVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
G+++A A ELR A L+ G + L FI
Sbjct: 262 GLDEARAFAGELREAALAALEPLGDAGSRLAELADFI 298
>gi|379720811|ref|YP_005312942.1| polyprenyl synthetase [Paenibacillus mucilaginosus 3016]
gi|378569483|gb|AFC29793.1| polyprenyl synthetase [Paenibacillus mucilaginosus 3016]
Length = 301
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/271 (37%), Positives = 148/271 (54%), Gaps = 14/271 (5%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKY--PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
+K Y L I+ L+ ++ ++ P + ES+ YS++A G KR P++ +AA E
Sbjct: 7 IKEYIAALAGRIEDELKTSLPEQWSVPGALRESVMYSLMA-GGKRLRPILVLAAAEALQG 65
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
AA P A A+EM+H SLIHDDLP MD+D RRG+ +NH VYG +AILAGDAL
Sbjct: 66 RAEAAMPAALAVEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEAMAILAGDALLTHA 125
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEK 214
F V H VP V+ ++ E+A+ G+ GM GQ D+ GE L +E++
Sbjct: 126 FHTAVQAARRHGVPADVVVDIVEELAKLAGAPGMVGGQAADMLGEQGLTKLEELEYIHLH 185
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL-----EAKAQTPRDE 269
K ++ S GG +AGA ++ +L R+G +G+ +Q+ DDIL E K P
Sbjct: 186 KTSDLIVFSLKAGGRIAGATSAQLDALERFGTCIGLAFQIQDDILDLIGDEQKLGKPVQS 245
Query: 270 EKKKKKGKSYVAFYGVEKAMEVAEELRAKAK 300
+ K+ K +Y F G+E + EL A+AK
Sbjct: 246 DVKQGK-VTYPYFIGIEASEAKVAELTAEAK 275
>gi|114320106|ref|YP_741789.1| farnesyl-diphosphate synthase [Alkalilimnicola ehrlichii MLHE-1]
gi|114226500|gb|ABI56299.1| farnesyl-diphosphate synthase [Alkalilimnicola ehrlichii MLHE-1]
Length = 306
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/278 (35%), Positives = 149/278 (53%), Gaps = 17/278 (6%)
Query: 46 WTTLITE-IDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAA 104
W + + +D L +A T +P +++++MRYS L+ G KR P++ A + G
Sbjct: 20 WRARVEQALDYWLPEAQT--HPARLHQAMRYSALSGG-KRLRPILVFATGQALGAAPTLL 76
Query: 105 FPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIV 164
ACA+E +HA SLIHDDLP MDDD RRGQP+ H + AILAGDAL L F HI+
Sbjct: 77 DGPACAVECIHAYSLIHDDLPAMDDDELRRGQPTCHKAFDEATAILAGDALQTLAF-HIL 135
Query: 165 SHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEK-----KFGEM 219
+H P + LR++ +A A GS GMA GQ +DL ++ Q + K G +
Sbjct: 136 AHDPGGVQNSRARLRMVEVLALAAGSRGMAGGQAIDLAATGQQLDVAQLEDMHIHKTGAL 195
Query: 220 SECSAVCGGFLAGADDDE-IQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKK 273
S G A D+E +Q L YG+ +G+ +Q+ DDIL+ + +T R ++++
Sbjct: 196 IRASVQLGALAASPVDEELLQRLDHYGKCIGLAFQIRDDILDVEGETEALGKARGSDQRQ 255
Query: 274 KKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGD 311
K +Y A G+ +A E A+ L A E L+ + D
Sbjct: 256 AKA-TYPALLGMREARETADRLVEDALESLEGLDQSAD 292
>gi|386723418|ref|YP_006189744.1| polyprenyl synthetase [Paenibacillus mucilaginosus K02]
gi|384090543|gb|AFH61979.1| polyprenyl synthetase [Paenibacillus mucilaginosus K02]
Length = 301
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/271 (37%), Positives = 148/271 (54%), Gaps = 14/271 (5%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKY--PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
+K Y L I+ L+ ++ ++ P + ES+ YS++A G KR P++ +AA E
Sbjct: 7 IKEYIAALAGRIEDELKTSLPEQWSVPGALRESVMYSLMA-GGKRLRPILVLAAAEALQG 65
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
AA P A A+EM+H SLIHDDLP MD+D RRG+ +NH VYG +AILAGDAL
Sbjct: 66 RAEAAMPAALAVEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEAMAILAGDALLTHA 125
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEK 214
F V H VP V+ ++ E+A+ G+ GM GQ D+ GE L +E++
Sbjct: 126 FHTAVQAARRHGVPADVVVDIVEELAKLAGAPGMVGGQAADMLGEQGLTKLEELEYIHLH 185
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL-----EAKAQTPRDE 269
K ++ S GG +AGA ++ +L R+G +G+ +Q+ DDIL E K P
Sbjct: 186 KTSDLIVFSLKAGGRIAGATSAQLDALERFGTCIGLAFQIQDDILDLIGDEQKLGKPVQS 245
Query: 270 EKKKKKGKSYVAFYGVEKAMEVAEELRAKAK 300
+ K+ K +Y F G+E + EL A+AK
Sbjct: 246 DVKQGK-VTYPYFIGIEASEAKVAELTAEAK 275
>gi|108804293|ref|YP_644230.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
gi|108765536|gb|ABG04418.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
Length = 299
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/252 (35%), Positives = 143/252 (56%), Gaps = 15/252 (5%)
Query: 67 EQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPC 126
E++ E+MRYS+LA G KR P++C+ + LFG P+A A+E++H SLIHDDLP
Sbjct: 33 ERLQEAMRYSLLAGG-KRVRPLLCMESARLFGAPPERVLPSAAAIELIHTYSLIHDDLPA 91
Query: 127 MDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIAR 186
MD+D RRG+P++H +G +AILAGDA F I E R L V+ E+A
Sbjct: 92 MDNDDFRRGRPTSHKKFGEAMAILAGDAFFGEALTLITVRQEG--TCEQR-LGVVQELAS 148
Query: 187 AVGSTGMAAGQFLDLE-------GEPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
+ G GM GQ LD++ +P ++ + K G + SA G LAGA ++ ++
Sbjct: 149 STGVNGMVGGQVLDMDQTGAGGSADPGMLFMIHRYKTGALIRSSARVGAILAGAGEEGLE 208
Query: 240 SLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK---KKGK-SYVAFYGVEKAMEVAEEL 295
++ RY +G+ +Q+VDD+L+A + R ++ ++GK ++V+ +G+E A A+
Sbjct: 209 AISRYATELGLCFQIVDDVLDAVGSSERLGKRAGGDAERGKATFVSVFGLEGARREADAA 268
Query: 296 RAKAKEELDRFK 307
+A L R +
Sbjct: 269 CERALRALGRLE 280
>gi|392987381|ref|YP_006485974.1| octaprenyl-diphosphate synthase/ dimethylallyltransferase/
geranyltranstransferase [Enterococcus hirae ATCC 9790]
gi|392334801|gb|AFM69083.1| octaprenyl-diphosphate synthase/ dimethylallyltransferase/
geranyltranstransferase [Enterococcus hirae ATCC 9790]
Length = 294
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/252 (35%), Positives = 137/252 (54%), Gaps = 15/252 (5%)
Query: 67 EQIYESMRYSVLAKGTKRAPPVMCVAACELFGVN-RIAAFPTACALEMVHAASLIHDDLP 125
EQ+ ESM YSV A G KR P++ ++ FG + + A ALEM+H SLIHDDLP
Sbjct: 29 EQLKESMLYSVRAGG-KRIRPLLLLSTVAAFGESINTTTYQVAAALEMIHTYSLIHDDLP 87
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
MD+D RRG+P+NH VYG +AILAGD L FQ I + HL P++L ++ ++A
Sbjct: 88 AMDNDDLRRGKPTNHKVYGEALAILAGDGLLTGAFQLI---SMAHLANSPKLL-LLQQLA 143
Query: 186 RAVGSTGMAAGQFLDLEGEPNLVE-----FVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
G+ GM AGQ D+EGE + F+ E+K G + + + GG LA ++ + S
Sbjct: 144 INAGTQGMVAGQAADIEGETKQLTLEELMFIHERKTGRLMHYALLAGGVLANQPEEVLAS 203
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK----SYVAFYGVEKAMEVAEELR 296
L++ +G+ +Q+ DD+L+ + T + K K +Y G+E+ E
Sbjct: 204 LQKLASHLGLAFQIRDDLLDVVSTTEVLGKTAGKDAKMEKTTYPGLLGIEETKSALENEI 263
Query: 297 AKAKEELDRFKK 308
A +D+ ++
Sbjct: 264 DAANRMIDQLEQ 275
>gi|363890208|ref|ZP_09317549.1| hypothetical protein HMPREF9628_01991 [Eubacteriaceae bacterium
CM5]
gi|361965889|gb|EHL18851.1| hypothetical protein HMPREF9628_01991 [Eubacteriaceae bacterium
CM5]
Length = 295
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 136/256 (53%), Gaps = 12/256 (4%)
Query: 61 ITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLI 120
I + Y +I +SMRYS L+ G KR P + V + + ++ AC +EM+H SLI
Sbjct: 24 IDLTYSSKILDSMRYS-LSAGGKRIRPCIFVEVLKSYNIDVKKYLDVACVIEMIHTYSLI 82
Query: 121 HDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRV 180
HDDLP MD+D RRG+P+NH VYG IAILAGDAL ++ + + + ++
Sbjct: 83 HDDLPAMDNDTLRRGKPTNHMVYGDAIAILAGDALLNFAYELLFKFIKNNF--QINSVKA 140
Query: 181 IAEIARAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADD 235
EI+ G GM GQ D+ E + +E++ E K ++ S V G+LA AD+
Sbjct: 141 CEEISNCAGIYGMIGGQVSDIINENKDISVDNLEYIHENKTAKLIIASMVSAGYLANADE 200
Query: 236 DEIQSLRRYGRAVGVLYQVVDDILEAKAQTP---RDEEKKKKKGK-SYVAFYGVEKAMEV 291
+++ LR+Y +G+ +Q+ DDIL+ + K +GK +Y ++G+EK+ E
Sbjct: 201 TDMEHLRKYAYNLGMAFQISDDILDIIGNEKLLGKSVGKDVDEGKNTYPKYFGIEKSKEK 260
Query: 292 AEELRAKAKEELDRFK 307
A +E+ K
Sbjct: 261 LNVYVNSAIDEISEIK 276
>gi|47076770|dbj|BAD18313.1| geranyltranstransferase [Geobacillus stearothermophilus]
Length = 319
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/233 (37%), Positives = 130/233 (55%), Gaps = 11/233 (4%)
Query: 33 SQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVA 92
+QL QF L + T + + +E+ ++ P ++ ++M YS L G KR P++ ++
Sbjct: 2 AQLSVEQF-LNEQKQAVETALSRYIER---LEGPAKLKKAMAYS-LEAGGKRIRPLLLLS 56
Query: 93 ACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAG 152
G + P ACA+EM+H SLIHDDLP MD+D RRG+P+NH V+G +AILAG
Sbjct: 57 TVRALGKDPAVGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAG 116
Query: 153 DALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL----- 207
D L FQ IV + P R LR+I +A+A G GM AGQ D+EGE
Sbjct: 117 DGLLTYAFQLIVEIDDERIPPSVR-LRLIERLAKAAGPEGMVAGQAADMEGEGKTLTLSE 175
Query: 208 VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILE 260
+E++ K G+M + S G + GAD + + L + +G+ +Q+ DDIL+
Sbjct: 176 LEYIHRHKTGKMLQYSVHAGALIGGADARQTRELDEFAAHLGLAFQIRDDILD 228
>gi|374603540|ref|ZP_09676518.1| polyprenyl synthetase [Paenibacillus dendritiformis C454]
gi|374390842|gb|EHQ62186.1| polyprenyl synthetase [Paenibacillus dendritiformis C454]
Length = 304
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/279 (34%), Positives = 148/279 (53%), Gaps = 22/279 (7%)
Query: 64 KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDD 123
+ P ++ ESM YS++A G KR P+ V ACE AA P ACA+EM+H SL+HDD
Sbjct: 34 QVPAELKESMLYSLMAGG-KRLRPLCVVIACESLNGPLEAADPVACAIEMIHTYSLVHDD 92
Query: 124 LPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAE 183
LP MD+D RRG+P+NH V+G +AILAGDAL F + H + L + E
Sbjct: 93 LPAMDNDDYRRGKPTNHKVFGEALAILAGDALLTHAFYTVAQCARRHGISAEIALTITEE 152
Query: 184 IARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCGGFLAGADDDEI 238
++ G GM GQ D+ GE L +E++ K ++ + G LAGA++ ++
Sbjct: 153 LSVYAGMRGMVGGQTADMLGEQGLTTLDQLEYIHLHKTSDLIVFALRAGAHLAGANEAQL 212
Query: 239 QSLRRYGRAVGVLYQVVDDILEAKAQ-----TPRDEEKKKKKGKSYVAFYGVEKAMEVAE 293
+L +G +G+ +Q+ DDIL+ + P+ ++K K +Y F G+E + +
Sbjct: 213 NALTEFGTKLGLAFQIQDDILDITGEEGLLGKPKGSDEKSGK-VTYPYFIGLEASKQEVV 271
Query: 294 ELRAKAKEELDRFKKYGDNVLP----LYSFIDYAADREF 328
L +AK+ + ++ G P LY DY +R+F
Sbjct: 272 RLTEEAKQAV---REAG---FPYPARLYELADYLLERQF 304
>gi|410453715|ref|ZP_11307660.1| polyprenyl synthetase [Bacillus bataviensis LMG 21833]
gi|409932929|gb|EKN69883.1| polyprenyl synthetase [Bacillus bataviensis LMG 21833]
Length = 297
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 116/200 (58%), Gaps = 7/200 (3%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P I ESM YS L G KR P++ A + FG++ P A A+EM+H SLIHDDLP
Sbjct: 31 PSVIKESMIYS-LEAGGKRIRPLLLFATLDAFGIDPKKGLPVAAAIEMIHTYSLIHDDLP 89
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
MD+D RRG+P+NH V+G IAILAGDAL F+ ++ P L+++ E+A
Sbjct: 90 SMDNDDLRRGKPTNHKVFGDAIAILAGDALLTYSFE-VIGLLSNEFAPANTKLKLVVEMA 148
Query: 186 RAVGSTGMAAGQFLDLEGE-PNL----VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G+ GM GQ D+EGE NL ++++ K G++ S V G LA + ++
Sbjct: 149 KAAGTEGMVGGQVADMEGEGKNLTLPELDYIHIHKTGKLLRFSVVAGAILADSSQSQLDH 208
Query: 241 LRRYGRAVGVLYQVVDDILE 260
L + +G+ +Q+ DDIL+
Sbjct: 209 LSGFAHHLGLAFQIQDDILD 228
>gi|389774289|ref|ZP_10192408.1| geranyltranstransferase [Rhodanobacter spathiphylli B39]
gi|388437888|gb|EIL94643.1| geranyltranstransferase [Rhodanobacter spathiphylli B39]
Length = 302
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/236 (38%), Positives = 133/236 (56%), Gaps = 9/236 (3%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAAC 94
S +L +LI +Q L++ + P +++ +MRY+VL+ G KR P++ AA
Sbjct: 5 SDHAELGPALQSLIQRAEQALDRHLPSAGHSPAELHRAMRYAVLSGG-KRLRPLLVYAAA 63
Query: 95 ELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDA 154
+ G + ACA+E++HA SL+HDDLP MDDD RRG+P+ H V+G +AILAGDA
Sbjct: 64 QALGHDSATLDAPACAVELIHAYSLVHDDLPAMDDDALRRGRPTCHIVFGEAMAILAGDA 123
Query: 155 LFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP-----NLVE 209
L L F+ I++ V + ++ + RA G+ GMA GQ LDL + +E
Sbjct: 124 LQALAFE-ILADDAARQVEAATGIAMLRALGRACGAEGMAGGQALDLAAVGRHLGLDQLE 182
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT 265
+ K G + S G AGADD +QSL RY AVG+ +QV DDIL+ + ++
Sbjct: 183 HMHACKTGALIRASVQLGALAAGADDGMLQSLDRYAHAVGLAFQVRDDILDVEGES 238
>gi|291550249|emb|CBL26511.1| Geranylgeranyl pyrophosphate synthase [Ruminococcus torques L2-14]
Length = 296
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 142/260 (54%), Gaps = 13/260 (5%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
Y I E+M YS++A G KR P++ + LFG +P A+EM+H SL+HDDL
Sbjct: 28 YQSVIMEAMEYSLMA-GGKRLRPMLMMETYRLFGGETEVIYPFMAAMEMIHTYSLVHDDL 86
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MD+D RRG+ + H VYG D+ ILAGDAL F+ R+ + + +
Sbjct: 87 PAMDNDEYRRGRKTTHIVYGEDMGILAGDALLNYAFETACKAFEQFPEESLRIGQAMRVL 146
Query: 185 ARAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
AR G GM GQ +D++ + +++F+ K G + E + + G LAGA ++++
Sbjct: 147 ARKAGIYGMIGGQVVDVKESGHQIDEEVLDFIFRLKTGALIESAMMIGAILAGASKEDVK 206
Query: 240 SLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYVAFYGVEKAMEVAEE 294
S+++ +G+ +Q+ DDIL+ + T P ++K +K +YV G+E+A + E
Sbjct: 207 SMQKIAGKIGMAFQIQDDILDVTSTTEQLGKPVHSDEKNEK-TTYVTLKGIEQAHKDVER 265
Query: 295 LRAKAKEELDRFKKYGDNVL 314
+ +A +EL +F GDN L
Sbjct: 266 MTEEAIDELKKFPA-GDNFL 284
>gi|424844831|ref|ZP_18269442.1| geranylgeranyl pyrophosphate synthase [Jonquetella anthropi DSM
22815]
gi|363986269|gb|EHM13099.1| geranylgeranyl pyrophosphate synthase [Jonquetella anthropi DSM
22815]
Length = 299
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/252 (40%), Positives = 139/252 (55%), Gaps = 24/252 (9%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P +++E+M YS+ A G KR PV+C L GV FP A ALEMVH ASLIHDDLP
Sbjct: 32 PPRLWEAMCYSLEAGG-KRIRPVLCQEGARLAGVKAEDTFPMALALEMVHTASLIHDDLP 90
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMD+D RRG+P+NH+V+G +A+LAGDAL GFQ + + RV+R + A
Sbjct: 91 CMDNDSLRRGKPTNHSVFGESLALLAGDALLCFGFQTALEGLKARKIETKRVVRAMELFA 150
Query: 186 RAVGSTGMAAGQFLDLEGEPNL---VEFVQEKKFGE---MSECSAVCGGFLAGADDDEIQ 239
A+G GM GQ LD + + + FVQ G+ + CS +CG L D +
Sbjct: 151 SALGPQGMCGGQTLDTDLQSRASCDLPFVQSMASGKTMALIRCSVLCGLCLGERGDALTE 210
Query: 240 SLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVA 292
L YGR +G+ +Q+ DD+L+A A T EE K GK ++V GV+ A
Sbjct: 211 RLDEYGRRLGLAFQIADDLLDATATT---EEAGKTTGKDEEQDKATFVCVLGVDGA---- 263
Query: 293 EELRAKAKEELD 304
+A+ KEE D
Sbjct: 264 ---KARLKEETD 272
>gi|452994013|emb|CCQ94485.1| geranyltranstransferase [Clostridium ultunense Esp]
Length = 296
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/280 (37%), Positives = 150/280 (53%), Gaps = 30/280 (10%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
PE++ +SM YS+ A G KR P++ + E G +R TA A+EM+H SLIHDDLP
Sbjct: 28 PERLLQSMDYSLRA-GGKRFRPILLFSVLESIGKSRELGLETAVAIEMIHTYSLIHDDLP 86
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTP---PHLVPEPRVLRVIA 182
MD+D RRG+ +NH V+G +AILAGDAL F +++S P P L +L +I
Sbjct: 87 GMDNDDYRRGKLTNHKVFGEGMAILAGDALLTWAF-YLLSVLPDFHPELSHATSLL-LIR 144
Query: 183 EIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCGGFLAGADDDE 237
++A A G TGM GQ LDLE E +E + K G+M SA+ G L GA +
Sbjct: 145 KLAEAAGPTGMVGGQALDLEAENKQLPLSELEKIHTHKTGDMIHFSAMAGAILGGATTKQ 204
Query: 238 IQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKK-------GKS-YVAFYGVEKAM 289
++ Y R +G+ +Q+ DDIL DE+K K+ GKS Y A G+E+++
Sbjct: 205 KEAFSTYARKLGLAFQIQDDILNIIG----DEQKLGKRVGSDAQLGKSTYPALLGMEESI 260
Query: 290 EVAEELRAKAKE--ELDRFKKYGDNVLPLYSFIDYAADRE 327
L +AK+ ++D K+ L+ DY R+
Sbjct: 261 AYMNRLVDEAKKAIQIDGIKRE-----HLHLLADYIVHRD 295
>gi|422343993|ref|ZP_16424920.1| hypothetical protein HMPREF9432_00980 [Selenomonas noxia F0398]
gi|355377741|gb|EHG24950.1| hypothetical protein HMPREF9432_00980 [Selenomonas noxia F0398]
Length = 291
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 146/298 (48%), Gaps = 20/298 (6%)
Query: 42 LKTYWTTLITEIDQNL--EKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
+K W I++ L E A T + E+M YS++A G KR P++ +AA + G
Sbjct: 1 MKELWRNRQELIERALRDELAKTDILDNTLREAMEYSLMAGG-KRLRPILLMAAADAVGA 59
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+ ACALEM+H SLIHDDLP MD+D RRG+ +NH VYG IAILAGDAL L
Sbjct: 60 DGTKLLTAACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGDGIAILAGDALLTLA 119
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----VQEK 214
F ++ VP +LRV+ I+RA G+ GM GQ LDL+ E + V
Sbjct: 120 FTVLLRQKD---VPAASLLRVVDVISRAAGAEGMVGGQVLDLQAENKAISLDELRRVHMG 176
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDE 269
K G + + G L GA + ++ +L Y G+ +Q+ DDIL+ P
Sbjct: 177 KTGALFHAALRSGAILGGASEQQLAALTAYADHFGLAFQITDDILDVVGNAEDIGKPVGS 236
Query: 270 EKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
++K K +YV + A E+A+ E L +G L + Y +R+
Sbjct: 237 DEKNHK-STYVTLTSLSAAQELAQR---TVDEALAALAVFGSEASFLRELVSYLVNRK 290
>gi|421860464|ref|ZP_16292588.1| geranylgeranyl pyrophosphate synthase [Paenibacillus popilliae ATCC
14706]
gi|410829946|dbj|GAC43025.1| geranylgeranyl pyrophosphate synthase [Paenibacillus popilliae ATCC
14706]
Length = 284
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 144/275 (52%), Gaps = 18/275 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P ++ E+M YS++A G KR P+ + ACE G AA P ACA+EM+H SL+HDDLP
Sbjct: 16 PAELKEAMLYSLMAGG-KRLRPLCVIIACESLGGPLEAADPVACAIEMLHTYSLVHDDLP 74
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
MD+D RRG+P+NH V+G +AILAGDAL F + H +P L + E++
Sbjct: 75 AMDNDDYRRGKPTNHKVFGEALAILAGDALLTHAFYTVAQSARRHSIPAEIALTITEELS 134
Query: 186 RAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
G GM GQ D+ GE + +E++ K ++ + G LAGA+ ++ +
Sbjct: 135 VYAGMRGMVGGQTADILGEQGMTTLVQLEYIHLHKTSDLIVFALRAGAHLAGANGSQLNA 194
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQ-----TPRDEEKKKKKGKSYVAFYGVEKAMEVAEEL 295
L +G +G+ +Q+ DDIL+ + P ++K K +Y F G+E + + L
Sbjct: 195 LTEFGTKLGLAFQIQDDILDITGEEVLLGKPTGSDEKCGK-VTYPYFIGLEASKQEVVRL 253
Query: 296 RAKAKEELDRFKKYGDNVLP--LYSFIDYAADREF 328
+AK+ + + P LY D+ R+F
Sbjct: 254 TEEAKQAV----RQAGFPFPARLYELADFLLKRQF 284
>gi|289423135|ref|ZP_06424950.1| geranyltranstransferase [Peptostreptococcus anaerobius 653-L]
gi|289156466|gb|EFD05116.1| geranyltranstransferase [Peptostreptococcus anaerobius 653-L]
Length = 295
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 142/265 (53%), Gaps = 11/265 (4%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
Y + I+E+M YS+ A G KR P++ + A +L P + A+EM+H SLIHDDL
Sbjct: 28 YQKTIFEAMNYSLRA-GGKRLRPILLMEAYKLCQGQGEDFVPYSVAMEMIHTYSLIHDDL 86
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P +D+D RRG+P+NH V+G +AILAGDAL ++ +++ H PE LR EI
Sbjct: 87 PALDNDDLRRGKPTNHIVFGEAMAILAGDALLNTAYETMLNAAFKHSRPEIS-LRAAYEI 145
Query: 185 ARAVGSTGMAAGQFLDLEGE-----PNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
+R G GM GQ +D+E E + ++++ K M S G LAG D+D ++
Sbjct: 146 SRGAGIYGMIGGQVVDVESEDKKIDKDKLDYIHMNKTAAMIVGSVRAGAILAGIDEDRLE 205
Query: 240 SLRRYGRAVGVLYQVVDDIL----EAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEEL 295
SL +Y +G+ +Q+VDDIL + K R +Y + G++ + ++ E L
Sbjct: 206 SLTKYAENIGLAFQIVDDILDIEGDEKLLGKRVGSDLDNDKSTYPSLLGIDASKKIVENL 265
Query: 296 RAKAKEELDRFKKYGDNVLPLYSFI 320
+AK L+ F + + L FI
Sbjct: 266 IEEAKTSLEVFASDAEFMNALADFI 290
>gi|585326|sp|Q08291.1|ISPA_GEOSE RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|391610|dbj|BAA02551.1| farnesyl diphosphate synthase [Geobacillus stearothermophilus]
Length = 297
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 129/233 (55%), Gaps = 11/233 (4%)
Query: 33 SQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVA 92
+QL QF L + T + + +E+ ++ P ++ ++M YS L G KR P++ ++
Sbjct: 2 AQLSVEQF-LNEQKQAVETALSRYIER---LEGPAKLKKAMAYS-LEAGGKRIRPLLLLS 56
Query: 93 ACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAG 152
G + P ACA+EM+H SLIHDDLP MD+D RRG+P+NH V+G +AILAG
Sbjct: 57 TVRALGKDPAVGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAG 116
Query: 153 DALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL----- 207
D L FQ I + P R LR+I +A+A G GM AGQ D+EGE
Sbjct: 117 DGLLTYAFQLITEIDDERIPPSVR-LRLIERLAKAAGPEGMVAGQAADMEGEGKTLTLSE 175
Query: 208 VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILE 260
+E++ K G+M + S G + GAD + + L + +G+ +Q+ DDIL+
Sbjct: 176 LEYIHRHKTGKMLQYSVHAGALIGGADARQTRELDEFAAHLGLAFQIRDDILD 228
>gi|384208042|ref|YP_005593762.1| geranylgeranyl pyrophosphate synthase [Brachyspira intermedia
PWS/A]
gi|343385692|gb|AEM21182.1| geranylgeranyl pyrophosphate synthase [Brachyspira intermedia
PWS/A]
Length = 294
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/280 (34%), Positives = 158/280 (56%), Gaps = 18/280 (6%)
Query: 40 FDLKTYWTTLITEIDQNLEKAI---TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
+LK Y + EI++ ++ +++ E ++Y + A G KR P++ ACEL
Sbjct: 1 MNLKEYMNIRLEEINKTIDNVFDKSSIELENSFIEMLKYPLDA-GGKRLRPILTCLACEL 59
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
F + + A ALE++H SL+HDDLP MD+D RRG+P+ H YG AIL GD L
Sbjct: 60 FNGDYKKSIIPAVALELIHTYSLVHDDLPAMDNDDLRRGKPTTHIKYGEANAILVGDGLL 119
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL---EGEPN--LVEFV 211
FQ ++S T V + + +++ E++ A G GM GQF+DL E E N +++ +
Sbjct: 120 THAFQ-LLSKTD---VKDSTLRKLLFELSYAAGINGMVMGQFIDLYYEEKEINFDMLKIL 175
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP---RD 268
KK G M A+ G +A +D++I+++ +YG A+G+ +Q+ DDIL+ + +
Sbjct: 176 HAKKTGAMIR-GAIRLGAIASENDNDIENITKYGEAIGLAFQIQDDILDVISDNETLGKT 234
Query: 269 EEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFK 307
K +K+GK +YV +G+E A E A+++ K+ E L +K
Sbjct: 235 VGKDEKEGKLTYVKQFGLEGAKEEAKKVIEKSIEYLKPYK 274
>gi|171915589|ref|ZP_02931059.1| geranylgeranyl pyrophosphate synthase [Verrucomicrobium spinosum
DSM 4136]
Length = 295
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/302 (36%), Positives = 164/302 (54%), Gaps = 24/302 (7%)
Query: 41 DLKTYWTTLITEIDQNLEKAITV--KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
DLK+Y T + +D L++ + P I+++MR+S+ A G KR P++C+AA E G
Sbjct: 4 DLKSYLTQRVAFVDAALDRFVAAAETRPVTIHKAMRHSLFAGG-KRLRPILCLAAAEACG 62
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
+ A ACA+E +H SLIHDDLPCMDDD RRG P+ H V+G +A+LAGDAL L
Sbjct: 63 GSLENALYAACAVECLHTYSLIHDDLPCMDDDDMRRGVPTCHKVFGEAMALLAGDALQAL 122
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQE 213
F+ +V+ TP P + + E+AR GS + GQ DLEGE + ++ E
Sbjct: 123 SFE-LVAQTPVTHRHSPAAM--VLELARTAGSLHLVGGQVADLEGEGKKLGIEDLRYIHE 179
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K + S GG A A D++Q+L +G A G+ +Q++DDIL+ T E+ K
Sbjct: 180 SKTAALLTSSVKLGGMSADAQLDQVQALHDFGMATGLAFQIIDDILDV---TQTTEKLGK 236
Query: 274 KKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK +Y A G++ + + A L KA++ L+ F G N L+ DY R
Sbjct: 237 SAGKDVASEKSTYPALMGLDASRDEAHRLTGKARQALEVF---GPNGHWLHQLADYLLKR 293
Query: 327 EF 328
++
Sbjct: 294 DY 295
>gi|260654971|ref|ZP_05860459.1| geranyltranstransferase [Jonquetella anthropi E3_33 E1]
gi|260630286|gb|EEX48480.1| geranyltranstransferase [Jonquetella anthropi E3_33 E1]
Length = 280
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/252 (40%), Positives = 139/252 (55%), Gaps = 24/252 (9%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P +++E+M YS+ A G KR PV+C L GV FP A ALEMVH ASLIHDDLP
Sbjct: 13 PPRLWEAMCYSLEAGG-KRIRPVLCQEGARLAGVKAEDTFPMALALEMVHTASLIHDDLP 71
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMD+D RRG+P+NH+V+G +A+LAGDAL GFQ + + RV+R + A
Sbjct: 72 CMDNDSLRRGKPTNHSVFGESLALLAGDALLCFGFQTALEGLKARKIETKRVVRAMELFA 131
Query: 186 RAVGSTGMAAGQFLDLEGEPNL---VEFVQEKKFGE---MSECSAVCGGFLAGADDDEIQ 239
A+G GM GQ LD + + + FVQ G+ + CS +CG L D +
Sbjct: 132 SALGPQGMCGGQTLDTDLQSRASCDLPFVQSMASGKTMALIRCSVLCGLCLGERGDALTE 191
Query: 240 SLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVA 292
L YGR +G+ +Q+ DD+L+A A T EE K GK ++V GV+ A
Sbjct: 192 RLDEYGRRLGLAFQIADDLLDATATT---EEAGKTTGKDEEQDKATFVCVLGVDGA---- 244
Query: 293 EELRAKAKEELD 304
+A+ KEE D
Sbjct: 245 ---KARLKEETD 253
>gi|452124386|ref|ZP_21936970.1| geranyltranstransferase [Bordetella holmesii F627]
gi|452127781|ref|ZP_21940361.1| geranyltranstransferase [Bordetella holmesii H558]
gi|451923616|gb|EMD73757.1| geranyltranstransferase [Bordetella holmesii F627]
gi|451926650|gb|EMD76783.1| geranyltranstransferase [Bordetella holmesii H558]
Length = 303
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/289 (35%), Positives = 155/289 (53%), Gaps = 28/289 (9%)
Query: 52 EIDQNLEKAITVK--YPEQIYESMRYSVLAKGTK-RAPPVMCVA-ACELFGVNRIAAFPT 107
I+Q LE+ I P +++++MRY+VL G + RA V AC + G N +A +
Sbjct: 18 HIEQVLEELIPAADVAPARLHDAMRYAVLGGGKRVRAALVYAAGQACPVSG-NMLAIEAS 76
Query: 108 ----ACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHI 163
A A+E++HA SL+HDDLPCMDDD RRG+P+ H + A+LAGDAL PL F+ +
Sbjct: 77 MDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTTHVQFDEATAMLAGDALQPLAFE-L 135
Query: 164 VSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGE 218
++ P + V++ + RA GS GMA GQ +DL + ++ + K G
Sbjct: 136 LAGMP---IAPALVVQATQVLGRAAGSLGMAGGQAIDLHSVGKTLSRDELQTMHSMKTGA 192
Query: 219 MSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK- 277
+ S GG +AGA Q+L Y +A+G+ +QVVDDIL+ A + K GK
Sbjct: 193 LLAASVALGGIVAGASSAARQALDNYAQAMGLAFQVVDDILDVTADSA---SLGKTAGKD 249
Query: 278 ------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+YV+ G+++A E+AEELR A L + G + + FI
Sbjct: 250 AVENKPTYVSLLGLDQARELAEELRQAALLALGPLGESGARLAQIADFI 298
>gi|374293690|ref|YP_005040713.1| farnesyl diphosphate synthase [Azospirillum lipoferum 4B]
gi|357427093|emb|CBS90031.1| farnesyl diphosphate synthase [Azospirillum lipoferum 4B]
Length = 300
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 150/292 (51%), Gaps = 18/292 (6%)
Query: 44 TYWTTLITEIDQNLEKAITVKYPE------QIYESMRYSVLAKGTKRAPPVMCVAACELF 97
T + + +I Q +E I P +++++MRY L G KR P + + + LF
Sbjct: 7 TEFKAALADIAQAVEDRINALLPTTDLAEARVFDAMRYGCL-NGGKRLRPFLVMQSAALF 65
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
GVN A A A+EMVH+ SLIHDDLP MDD RRG+P+ H + AILAGD L
Sbjct: 66 GVNADCAIRVAAAVEMVHSYSLIHDDLPAMDDGELRRGRPTCHRQFDEATAILAGDGLLT 125
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----VQ 212
F+ +++ H P R +++ +A+A G GM GQ LDL E + +Q
Sbjct: 126 FAFE-VLADPATHEDPNIRC-QLVTALAKASGGHGMVGGQMLDLIAEHETFDLGTTTRLQ 183
Query: 213 EKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA---QTPRDE 269
K GEM S GG L A+ + +LR Y +G+ +Q+VDD+L+ + +T +
Sbjct: 184 RMKTGEMIAYSCEAGGILGKANPPQRTALRAYAHDLGLAFQIVDDLLDVEGTAEETGKTV 243
Query: 270 EKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+ + GK ++V+ G ++A AE L +A + LD F D + + F+
Sbjct: 244 GRDAQAGKATFVSILGRDRARAQAEMLANQASQHLDIFDGRADMLKAVADFV 295
>gi|345877461|ref|ZP_08829207.1| geranylgeranyl pyrophosphate synthetase [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344225510|gb|EGV51867.1| geranylgeranyl pyrophosphate synthetase [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 300
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 107/307 (34%), Positives = 152/307 (49%), Gaps = 23/307 (7%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVKY--PEQIYESMRYSVLAKGTKRAPPVMCVAAC 94
S+ L+ + ++ L+K++ + P +++++MRY+VL G KR P++ A
Sbjct: 2 SSNTALREFMLFCQNRVEHALDKSLPAESTSPARLHQAMRYAVLGGG-KRIRPILTYATG 60
Query: 95 ELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDA 154
+ GV ACA+EM+HA SL+HDDLP MDDD RRG+P+ H Y AIL GDA
Sbjct: 61 QALGVEINQLDTAACAVEMIHAYSLVHDDLPAMDDDELRRGRPTCHKAYDEATAILVGDA 120
Query: 155 LFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG---EPNLVEF- 210
L FQ I + H E R L +I ++RA GS GM GQ LDL E +L E
Sbjct: 121 LQTQAFQIICTSGNLHASAETR-LEMIETLSRASGSRGMCGGQALDLNAVGQELSLAELE 179
Query: 211 -VQEKKFGEMSECSAVCGGFLA-GADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRD 268
+ K G + S LA + ++ L Y + VG+ +Q+ DDIL+ + T
Sbjct: 180 NLHIHKTGALIRASVNTASLLAPRLEPEQAHQLDHYAKCVGLAFQIRDDILDVEGDT--- 236
Query: 269 EEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFID 321
E K +GK +Y A G+ A E A EL+A A L F D PL D
Sbjct: 237 ETLGKTQGKDQAQDKPTYPALLGLNGAREKAAELQADAHRSLTGFDSKAD---PLRWLAD 293
Query: 322 YAADREF 328
Y R++
Sbjct: 294 YIIGRDY 300
>gi|392409860|ref|YP_006446467.1| geranylgeranyl pyrophosphate synthase [Desulfomonile tiedjei DSM
6799]
gi|390622996|gb|AFM24203.1| geranylgeranyl pyrophosphate synthase [Desulfomonile tiedjei DSM
6799]
Length = 299
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 144/270 (53%), Gaps = 13/270 (4%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P ++++MRYSV A G KR PV+ +AA E+ G + P A ALE +H SLIHDDLP
Sbjct: 32 PAVLHQAMRYSVFAGG-KRIRPVLAMAAAEVVGGSGKQVLPLAVALECIHTYSLIHDDLP 90
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
MD+D RRG+P+ H V+G +AILAGDAL G + +L I E+A
Sbjct: 91 AMDNDDLRRGKPTVHKVFGEAVAILAGDALLTYGLGVLSLPEVSRTYRAENLLAAIRELA 150
Query: 186 RAVGSTGMAAGQFLDL--EG---EPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
A GST + AGQ +D+ EG + ++VE++ K G + S VCG L + + I+
Sbjct: 151 LAAGSTRLIAGQVMDILCEGKDVDKHMVEYIVRNKTGALIRASLVCGATLVDGELERIEV 210
Query: 241 LRRYGRAVGVLYQVVDDILEAKA---QTPRDEEKKKKKGKSYV-AFYGVEKAMEVAEELR 296
L ++G +G+++Q+ DD+L+ + + + +K +GK+ + G E+ E+ L
Sbjct: 211 LGKFGDLLGMIFQIRDDLLDIEGDPVKMGKAVQKDGDRGKATLPRLLGAERTEEIMYSLI 270
Query: 297 AKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
A+ D + G+ PL Y R
Sbjct: 271 RNAE---DTIRPLGETANPLVQITHYIGKR 297
>gi|300870060|ref|YP_003784931.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
95/1000]
gi|300687759|gb|ADK30430.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
95/1000]
Length = 295
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 153/285 (53%), Gaps = 20/285 (7%)
Query: 40 FDLKTYWTTLITEID---QNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
+LK Y + +ID N+ K+ ++ + ++Y + A G KR P++ ACEL
Sbjct: 1 MNLKEYMNIRLKDIDSEINNIFKSSSISLENNFLDMLKYPLDA-GGKRLRPILTCLACEL 59
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
F + A A +LE++H SL+HDDLP MD+D RRG+P+ H YG AIL GD L
Sbjct: 60 FNGDYKKAIIPAVSLELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGLL 119
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----V 211
F+ I+S+ V + + +++ EI+ A G +GM GQF+DL E ++F +
Sbjct: 120 THSFE-ILSNAN---VNDKTLRKLLYEISYAAGVSGMVMGQFIDLYYEERDIDFEMLKIL 175
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP---RD 268
KK G M + G + ++ ++++ +YG A+G+ +Q+ DDIL+ + +
Sbjct: 176 HSKKTGAMIRGAVRVGAIASEKENINLENITKYGEAIGLAFQIQDDILDVISDNETLGKT 235
Query: 269 EEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDN 312
K +K+GK +YV +G+E A E A E +KE +D Y DN
Sbjct: 236 VGKDEKEGKLTYVKQFGLEGAKEKAIE---TSKEAIDYLNVYDDN 277
>gi|355672445|ref|ZP_09058375.1| hypothetical protein HMPREF9469_01412 [Clostridium citroniae
WAL-17108]
gi|354815146|gb|EHE99742.1| hypothetical protein HMPREF9469_01412 [Clostridium citroniae
WAL-17108]
Length = 303
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 98/281 (34%), Positives = 147/281 (52%), Gaps = 21/281 (7%)
Query: 50 ITEIDQNLEKAITVKYPEQ------IYESMRYSVLAKGTKRAPPVMCVAACELF-GVNRI 102
+ E +EK I PE+ I E+M YS+ A G KR P++ C LF G
Sbjct: 11 LNERTAEIEKLIETYLPEETGHQKTILEAMNYSIRAGG-KRLRPMLMQEMCRLFTGCLLE 69
Query: 103 AAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQH 162
+ P A+EM+H +SL+HDDLPCMDDD RRG+ S +G DI +LAGDAL F+
Sbjct: 70 SVIPFMAAVEMIHTSSLVHDDLPCMDDDMMRRGKASTWAEFGEDIGVLAGDALMMYAFET 129
Query: 163 IVSHTPPHLVPE--PRVLRVIAEIARAVGSTGMAAGQFLDLE--GEP---NLVEFVQEKK 215
+ P+ R+ + I +AR G GM GQ +D+E G P + ++F+ K
Sbjct: 130 ASCAFETSVDPDELSRIGKAIGILARKTGVYGMIGGQTVDVELAGGPIPADKLDFIYHLK 189
Query: 216 FGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQ-----TPRDEE 270
G + E S + G L GA D++ + + +G+ +Q+ DDIL+ P + +
Sbjct: 190 TGALIEASMLIGAVLGGAADEDCKIVESLASKIGMAFQIQDDILDVTGSEEIIGKPVNSD 249
Query: 271 KKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGD 311
+K KK +YV G+EKA + E++ A+A EEL++ D
Sbjct: 250 EKNKK-TTYVTLEGLEKAKQDVEKISAEAIEELNKLPGNND 289
>gi|421484057|ref|ZP_15931629.1| geranyltranstransferase [Achromobacter piechaudii HLE]
gi|400197764|gb|EJO30728.1| geranyltranstransferase [Achromobacter piechaudii HLE]
Length = 303
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 106/273 (38%), Positives = 145/273 (53%), Gaps = 26/273 (9%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAA---CELFG-VNRIAAF--PTACALEMVHAASL 119
P +++E+MRY+VL G KR M AA C + G V I A A A+E++HA SL
Sbjct: 34 PVRLHEAMRYAVLGGG-KRVRAAMVYAAGQACPVSGSVLAIEASLDRAAAAVELIHAYSL 92
Query: 120 IHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSH-TPPHLVPEPRVL 178
+HDDLPCMDDD RRGQP+ H + A+LAGDAL PL F + S P L ++
Sbjct: 93 VHDDLPCMDDDTLRRGQPTTHVKFDEATAMLAGDALQPLAFDLLASMPIAPAL-----IV 147
Query: 179 RVIAEIARAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAGA 233
+ +ARA GS GMA GQ +DL + ++ + K G M CS GG +AGA
Sbjct: 148 QATQSLARAAGSQGMAGGQAIDLLSVGRSLSRDDLQTMHSMKTGAMLACSVALGGIVAGA 207
Query: 234 DDDEIQSLRRYGRAVGVLYQVVDDILEAKA------QTPRDEEKKKKKGKSYVAFYGVEK 287
Q+L Y +A+G+ +QVVDDIL+ A +TP + + K +YV+ G+ +
Sbjct: 208 SSASRQALDAYAQAMGLAFQVVDDILDVTADTASLGKTPGKDAAENK--PTYVSLLGLSE 265
Query: 288 AMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
A A+ELR A L G + L FI
Sbjct: 266 ARAFADELREAALAALAPLGDAGGRLAQLADFI 298
>gi|171060046|ref|YP_001792395.1| polyprenyl synthetase [Leptothrix cholodnii SP-6]
gi|170777491|gb|ACB35630.1| Polyprenyl synthetase [Leptothrix cholodnii SP-6]
Length = 298
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 98/283 (34%), Positives = 152/283 (53%), Gaps = 18/283 (6%)
Query: 35 LRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAAC 94
+ ++ FD + T + +++ L++ + P ++ +MRY VL G KR P++ +AA
Sbjct: 1 MSASPFD--DWMRTALDQVEIELDRQVPADAPAELGLAMRYGVL-DGGKRLRPLLVLAAA 57
Query: 95 ELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDA 154
+ AA ACA+E++HA SLIHDD+PCMD+D RRG+P+ H YG A+LAGDA
Sbjct: 58 GCVDGHPEAALRAACAVELIHAYSLIHDDMPCMDNDVLRRGKPTVHVQYGEARAMLAGDA 117
Query: 155 LFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL-----EGEPNLVE 209
+ L F+ + VP R+ + +ARA G GMA GQ +DL + + ++
Sbjct: 118 MQALAFEVLTPEDTDDGVPPALQARLCSLLARASGVLGMAGGQAIDLAHVGKQMDEAALQ 177
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
+ +K G + + S + G + Q+L YG A+G+ +QVVDDIL+ T E
Sbjct: 178 DMHGRKTGALLQASVLMGAACGRTTPAQWQALADYGWAIGLAFQVVDDILDV---TQCAE 234
Query: 270 EKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDR 305
K GK +YV+ G+E A E A+ L A+A L+R
Sbjct: 235 TLGKTAGKDADQNKPTYVSLLGLEGARERAQSLHAQAHAALER 277
>gi|124267817|ref|YP_001021821.1| farnesyl-diphosphate synthase [Methylibium petroleiphilum PM1]
gi|124260592|gb|ABM95586.1| farnesyl-diphosphate synthase [Methylibium petroleiphilum PM1]
Length = 297
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 159/302 (52%), Gaps = 21/302 (6%)
Query: 35 LRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAAC 94
++ +FD T+ + +++ LE+ + P + ++MRY VL G KR P++ ++A
Sbjct: 1 MKRDEFD--TWSRDRLEQVEAALERWVPALAPAGLGDAMRYGVL-DGGKRLRPLLVLSAA 57
Query: 95 ELFG-VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGD 153
E G + AA AC++E++HA SLIHDD+PCMDDD RRG+P+ H +G A+LAGD
Sbjct: 58 EAVGATDSEAALRAACSVELIHAYSLIHDDMPCMDDDVLRRGKPTVHVKFGQAQAMLAGD 117
Query: 154 ALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLE--GEP---NLV 208
A+ L F+ + VP R+ +ARA G GMA GQ +DL G P +
Sbjct: 118 AMQALAFEVLTPEDDS--VPLALQARLCGLLARAAGQDGMAGGQAIDLASIGRPLDEQSL 175
Query: 209 EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL---EAKAQT 265
+ +K G + + S + G A Q+L YG A+G+ +QVVDDIL +A +
Sbjct: 176 SDMHRRKTGALLQASVMMGAACGDASPQARQALSEYGAALGLAFQVVDDILDVTQASSTL 235
Query: 266 PRDEEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAA 324
+ K + K +YV G+ A A+ LR +A+ L R + LP +++ A
Sbjct: 236 GKTAGKDADQNKPTYVTVLGLSAAQRRAQTLREQAQAALAR------SGLPDAAWLSVLA 289
Query: 325 DR 326
D+
Sbjct: 290 DK 291
>gi|423016477|ref|ZP_17007198.1| geranyltranstransferase [Achromobacter xylosoxidans AXX-A]
gi|338780419|gb|EGP44827.1| geranyltranstransferase [Achromobacter xylosoxidans AXX-A]
Length = 303
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 148/277 (53%), Gaps = 34/277 (12%)
Query: 66 PEQIYESMRYSVLAKGTK-RAPPVMCVA-ACELFG--------VNRIAAFPTACALEMVH 115
P +++E+MRY+VL G + RA V AC + G ++R AA A+E++H
Sbjct: 34 PARLHEAMRYAVLGGGKRVRAALVYAAGQACPVSGSVLAVEASLDRAAA-----AVELIH 88
Query: 116 AASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSH-TPPHLVPE 174
A SL+HDDLPCMDDD RRG+P+ H + A+LAGDAL PL F+ + S P L
Sbjct: 89 AYSLVHDDLPCMDDDVLRRGRPTTHVQFDEATAMLAGDALQPLAFELLASMPIAPAL--- 145
Query: 175 PRVLRVIAEIARAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGF 229
+++ +ARA GS GMA GQ +DL + ++ + K G M CS GG
Sbjct: 146 --IVQATQSLARAAGSQGMAGGQAIDLLSVGHRLSRDELQQMHSMKTGAMLACSVALGGI 203
Query: 230 LAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA------QTPRDEEKKKKKGKSYVAFY 283
+AGA Q+L Y +A+G+ +QVVDDIL+ A +TP + + K +YV+
Sbjct: 204 VAGASSASRQALDIYAQAMGLAFQVVDDILDVTADSASLGKTPGKDAAENK--PTYVSLL 261
Query: 284 GVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
G+++A A ELR A L+ G + L FI
Sbjct: 262 GLDEARAFASELREAALVALEPLGDAGKRLAELADFI 298
>gi|220904228|ref|YP_002479540.1| polyprenyl synthetase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868527|gb|ACL48862.1| Polyprenyl synthetase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 298
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 117/295 (39%), Positives = 164/295 (55%), Gaps = 26/295 (8%)
Query: 49 LITEIDQNLEKAITV-----KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIA 103
L+ E Q +E+ + V P+++ +SM YS+ A G KR PV+C++A L G+
Sbjct: 11 LLRERGQMVEEELAVCLDGRAVPQRLKDSMLYSLQAGG-KRLRPVLCLSAAALCGLPLRD 69
Query: 104 AFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHI 163
A P A A+EM+H SL+HDDLP MDDD RRG+PSNH + AILAGD L F +
Sbjct: 70 ALPFASAIEMIHTYSLVHDDLPAMDDDDLRRGKPSNHKAFDEATAILAGDGLLTDAFL-M 128
Query: 164 VSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNLVEF-----VQEKKF 216
+ +P L P PRVLR I+E+A A GS+GM GQ D+ G+ +LV + K
Sbjct: 129 MCRSP--LAP-PRVLRAISELALAAGSSGMVGGQEWDMIFTGK-DLVSIEDLRGIHAMKT 184
Query: 217 GEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEK 271
G + S VCG LAGA D+++ ++ YG A+GV +Q+ DDIL+ A T P +
Sbjct: 185 GALLRASCVCGAMLAGASDEDLAAIGSYGAALGVAFQIADDILDVVADTATLGKPVGSDA 244
Query: 272 KKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
+ K K+Y A G++++ +A E KAK L F GD L + DY R
Sbjct: 245 AQGK-KTYPALLGLDQSRALAREQAEKAKAALAGFS--GDEADFLRALADYTVTR 296
>gi|331269445|ref|YP_004395937.1| polyprenyl synthetase [Clostridium botulinum BKT015925]
gi|329125995|gb|AEB75940.1| Polyprenyl synthetase [Clostridium botulinum BKT015925]
Length = 289
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 138/243 (56%), Gaps = 19/243 (7%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
Y + +Y+SM+YS+ G KR P++ ++ ++ N P ACA+EM+H SLIHDDL
Sbjct: 24 YNKVLYDSMKYSIEV-GGKRIRPILMLSTYSIYKDNYKDIMPMACAIEMIHTYSLIHDDL 82
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MD+D RRG+P+NH V+G IAILAGD L + +++ H +VI+E
Sbjct: 83 PGMDNDDLRRGKPTNHKVFGEAIAILAGDGLLNEAMNVMFNYSLTHDKVALMASKVISE- 141
Query: 185 ARAVGSTGMAAGQFLDL--EGEP---NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A G+ GM GQ +D+ EG+ + ++++ + K G++ + S + G L GA + ++
Sbjct: 142 --AAGAEGMIGGQVVDIISEGQKISIDKLKYMHKNKTGQLIKSSIIAGAILGGASKENLE 199
Query: 240 SLRRYGRAVGVLYQVVDDILEAKAQTP-------RDEEKKKKKGKSYVAFYGVEKAMEVA 292
L +G +G+ +Q+ DDIL+ + +D+E K ++++ +G+EK E+
Sbjct: 200 ILDEFGSKLGLAFQIKDDILDVIGDSKVLGKEVHKDDENNK---TTFISCFGLEKCKELC 256
Query: 293 EEL 295
EL
Sbjct: 257 VEL 259
>gi|226323204|ref|ZP_03798722.1| hypothetical protein COPCOM_00976 [Coprococcus comes ATCC 27758]
gi|225208394|gb|EEG90748.1| polyprenyl synthetase [Coprococcus comes ATCC 27758]
Length = 300
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 94/260 (36%), Positives = 137/260 (52%), Gaps = 19/260 (7%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
Y QI E+M YSV+A G KR P++ LFG P A+EM+H SL+HDDL
Sbjct: 32 YQSQIMEAMEYSVMA-GGKRLRPMLMQETYRLFGGEGKEIEPFMAAMEMIHTYSLVHDDL 90
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVL--RVIA 182
P MD+D RRG+ + H VYG + ILAGDAL F+ V + PE +L + +
Sbjct: 91 PAMDNDEYRRGRKTTHIVYGEAMGILAGDALLNYAFETAVK--AFEIAPEKSLLIGKALK 148
Query: 183 EIARAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDE 237
+A G GM GQ +D+ + ++ F+ E K G + E S + G LAGA+D E
Sbjct: 149 ILAEKAGIYGMIGGQVVDVASCGVGLDEGMLNFIYELKTGALIESSMMIGALLAGAEDAE 208
Query: 238 IQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYVAFYGVEKAMEVA 292
++ +++ VG+ +Q+ DDIL+ + T P ++K +K +YV G+EKA
Sbjct: 209 LEKVQKIASGVGIAFQIQDDILDVTSTTEELGKPVHSDEKNEK-TTYVTLKGLEKATRDV 267
Query: 293 EELRAKAKE---ELDRFKKY 309
E + +A E LDR Y
Sbjct: 268 EVISQEALELLSGLDRENTY 287
>gi|431806893|ref|YP_007233791.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
P43/6/78]
gi|430780252|gb|AGA65536.1| geranylgeranyl pyrophosphate synthase [Brachyspira pilosicoli
P43/6/78]
Length = 295
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 152/285 (53%), Gaps = 20/285 (7%)
Query: 40 FDLKTYWTTLITEID---QNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
+LK Y + +ID N+ K+ ++ + ++Y + A G KR P++ ACEL
Sbjct: 1 MNLKEYMNIRLKDIDSEINNIFKSSSISLENNFLDMLKYPLDA-GGKRLRPILTCLACEL 59
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
F + A A +LE++H SL+HDDLP MD+D RRG+P+ H YG AIL GD L
Sbjct: 60 FNGDYKKAIIPAVSLELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGLL 119
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----V 211
F+ I+S+ V + + +++ EI+ A G +GM GQF+DL E ++F +
Sbjct: 120 THSFE-ILSNAN---VNDKTLRKLLYEISYAAGVSGMVMGQFIDLYYEERDIDFEMLKIL 175
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP---RD 268
KK G M + G + ++ ++++ +YG A+G+ +Q+ DDIL+ + +
Sbjct: 176 HSKKTGAMIRGAVRVGAIASEKENINLENITKYGEAIGLAFQIQDDILDVISDNETLGKT 235
Query: 269 EEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDN 312
K +K GK +YV +G+E A E A E +KE +D Y DN
Sbjct: 236 VGKDEKDGKLTYVKQFGLEGAKEKAIE---TSKEAIDYLNVYDDN 277
>gi|293376580|ref|ZP_06622808.1| geranyltranstransferase [Turicibacter sanguinis PC909]
gi|325839379|ref|ZP_08166818.1| geranyltranstransferase [Turicibacter sp. HGF1]
gi|292644806|gb|EFF62888.1| geranyltranstransferase [Turicibacter sanguinis PC909]
gi|325490499|gb|EGC92815.1| geranyltranstransferase [Turicibacter sp. HGF1]
Length = 291
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 93/238 (39%), Positives = 128/238 (53%), Gaps = 13/238 (5%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P ++ ESM YS L G KR P++ A E F + + A ALEM+H SLIHDDLP
Sbjct: 27 PSELKESMLYS-LKVGGKRLRPILLFAVLESFNLAPQKGYHVAAALEMIHTYSLIHDDLP 85
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
MDDD RRG+P+NH V+G AILAGD+L F+ I L R L +I ++
Sbjct: 86 AMDDDALRRGKPTNHIVFGEATAILAGDSLLTHAFKVIAE--DERLTTNQR-LSLIQALS 142
Query: 186 RAVGSTGMAAGQFLDLEGEPNLVEFVQEK-----KFGEMSECSAVCGGFLAGADDDEIQS 240
A G GM AGQ LD+E E V Q K K G + E + V G +A ADD+ I
Sbjct: 143 LASGPMGMVAGQVLDMEAEVKAVSLEQLKQIHVNKTGRLIEFAIVAGAIIAQADDEVINQ 202
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTP---RDEEKKKKKGKS-YVAFYGVEKAMEVAEE 294
L+++ +G+ +Q+ DDIL+ + T ++ GKS YV+ + +A + EE
Sbjct: 203 LKQFAYHLGLAFQIKDDILDVEGSTAVLGKNVGSDLVNGKSTYVSLTSLTEAKNMLEE 260
>gi|256752864|ref|ZP_05493702.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1]
gi|256748241|gb|EEU61307.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus CCSD1]
Length = 168
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 100/150 (66%), Gaps = 2/150 (1%)
Query: 53 IDQNLEKAITVK-YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACAL 111
+++ L + + ++ PE IYE+MRYSV A G KR PV+C+++CEL G + A P ACA+
Sbjct: 13 VEKELHRILDIEEKPEIIYEAMRYSVFA-GGKRLRPVLCLSSCELLGGDIKKALPVACAI 71
Query: 112 EMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHL 171
E++H SLIHDDLP MD+D RRG+P+NH VYG IAILAGD L LG++ +V H H
Sbjct: 72 ELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLGYEVLVRHALEHP 131
Query: 172 VPEPRVLRVIAEIARAVGSTGMAAGQFLDL 201
R+L+ EIA A G G+ GQ +D+
Sbjct: 132 EDYERILKATNEIATASGCKGIIGGQVVDI 161
>gi|117618681|ref|YP_857809.1| geranyltranstransferase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117560088|gb|ABK37036.1| geranyltranstransferase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 296
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 103/270 (38%), Positives = 142/270 (52%), Gaps = 17/270 (6%)
Query: 68 QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCM 127
++ ++MRY +L G KR P + A E+ GV A A+E +HA SL+HDDLP M
Sbjct: 31 RLRDAMRYGLLLGG-KRVRPFLVYAVGEMLGVKNELLDGPAAAVECIHAYSLLHDDLPAM 89
Query: 128 DDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARA 187
D+D RRGQP+ H + AILAGDAL L F + H P + RV R+++ +ARA
Sbjct: 90 DNDDLRRGQPTVHKAFDEGTAILAGDALQTLAFTILADHPMPDSLLANRV-RMLSRLARA 148
Query: 188 VGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDE--IQS 240
G GM GQ LDL+ E + E V K G + EC AV G L AD DE + +
Sbjct: 149 SGYLGMCGGQALDLQAEGRQISIAELEQVHRHKTGALIEC-AVALGALCKADVDETTLSA 207
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTP----RDEEKKKKKGKSYVAFYGVEKAMEVAEELR 296
L+ Y A+G+ +QV DDIL+ T R ++ +Y A G++ A E+A EL
Sbjct: 208 LQTYAAAIGLAFQVQDDILDITGDTATLGKRQGSDLAQEKSTYPALLGLDNARELARELH 267
Query: 297 AKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
KA L Y ++L +F DY +R
Sbjct: 268 GKALTALQSL-PYNTDILE--AFADYIIER 294
>gi|148258788|ref|YP_001243373.1| farnesyl-diphosphate synthase [Bradyrhizobium sp. BTAi1]
gi|146410961|gb|ABQ39467.1| farnesyl-diphosphate synthase [Bradyrhizobium sp. BTAi1]
Length = 307
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 106/285 (37%), Positives = 144/285 (50%), Gaps = 18/285 (6%)
Query: 49 LITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTA 108
L+ E+ + A + P+++ ESMRYS L G KR P + V + +FGV R A
Sbjct: 23 LLGELLGDAPLADEIARPQRLIESMRYSSLGGG-KRLRPFLVVESAAVFGVPRKGALLAG 81
Query: 109 CALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTP 168
ALE +H SLIHDDLP MD+ RRG+P+ H VY AILAGDAL + F I++
Sbjct: 82 AALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKVYDDATAILAGDALLTIAFD-IITRDE 140
Query: 169 PHLVPEPRV-LRVIAEIARAVGSTGMAAGQFLDLEGE-------PNLVEFVQEKKFGEMS 220
H P+ V L + +AR G GMA GQ LDL GE P V VQ+ K G +
Sbjct: 141 IH--PDAGVRLALTRALARCAGVGGMAGGQILDLAGEGRFGDSGPVDVARVQQMKTGALL 198
Query: 221 ECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL--EAKAQT---PRDEEKKKKK 275
+ G L A E Q+L YGRA+G +Q+ DD+L E A T P + + K
Sbjct: 199 RFGCIAGALLGQASPAEYQALDDYGRALGEAFQIADDLLDVEGDAATLGKPAGADAELGK 258
Query: 276 GKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
++V G+E A + +L A+ L F GD + F+
Sbjct: 259 -TTFVTQLGIEGAKQRVRDLLARGDAALSIFGSKGDVLRAAAHFV 302
>gi|12862619|dbj|BAB32548.1| putative GGPP synthase [Lactuca indica var. laciniata]
Length = 205
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 122/211 (57%), Gaps = 19/211 (9%)
Query: 129 DDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAV 188
+D RRG+P+NH VYG D+A+LAGDAL F+HI + T V R+LR I E+A+ +
Sbjct: 1 NDDFRRGKPTNHIVYGEDVAVLAGDALLSFSFEHITTATKG--VSSDRILRAIGELAKCI 58
Query: 189 GSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRR 243
GS G+ AGQ +D+ E + +EF+ K + E S V G + G D+EI+ LR+
Sbjct: 59 GSEGLVAGQVVDVCSEGADVGLDHLEFIHLHKTAALLEGSVVLGAIMGGGSDEEIEKLRK 118
Query: 244 YGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVA-------FYGVEKAMEVAEELR 296
+ R++G+L+QVVDDIL+ T EE K GK VA G+EK+ E AE+L
Sbjct: 119 FARSIGLLFQVVDDILDV---TKSSEELGKTAGKDLVAGKTTYPKLLGIEKSREFAEKLN 175
Query: 297 AKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+A+E+L F + PL + +Y A RE
Sbjct: 176 KEAQEQLSEFDQR--KAAPLIALANYIAYRE 204
>gi|126665230|ref|ZP_01736213.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17]
gi|126630600|gb|EBA01215.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17]
Length = 299
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/283 (36%), Positives = 147/283 (51%), Gaps = 18/283 (6%)
Query: 51 TEIDQNLEKAI-TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTAC 109
EIDQ L + +++ ++MRY +L G KR P +C+AA E G R A AC
Sbjct: 18 AEIDQQLADYMDQASASQRLQDAMRYGLLGGG-KRIRPALCLAAAEAVGGQRQIALAPAC 76
Query: 110 ALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPP 169
ALEM+HA SL+HDDLP MD+D RRG+ + H + AILAGDAL F+ V T P
Sbjct: 77 ALEMIHAYSLMHDDLPAMDNDDLRRGRATAHIAFDESSAILAGDALQAEAFR--VLATAP 134
Query: 170 HLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSA 224
L E + L ++ +A A G+ GM GQ +DLE + +E + K G + E S
Sbjct: 135 RLSAEVK-LAMVKALANACGANGMVGGQAIDLESVARTLTLDQLENMHRHKTGALIEASV 193
Query: 225 VCGGFLAGADDDE-IQSLRRYGRAVGVLYQVVDDILEAKAQTP---RDEEKKKKKGK-SY 279
G G D + +L RY RA+G+ +QV DD+L+ + T + + +GK +Y
Sbjct: 194 HLGALAGGVKDPALLDALARYARALGLAFQVQDDLLDIEGDTEVMGKTQGSDIARGKPTY 253
Query: 280 VAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
A G + A E+ L A+A E L K G L++ DY
Sbjct: 254 PALLGPKGARELLARLLAEAHESL---KGLGIQADALHAMADY 293
>gi|160938274|ref|ZP_02085629.1| hypothetical protein CLOBOL_03170 [Clostridium bolteae ATCC
BAA-613]
gi|158438647|gb|EDP16404.1| hypothetical protein CLOBOL_03170 [Clostridium bolteae ATCC
BAA-613]
Length = 305
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 144/274 (52%), Gaps = 21/274 (7%)
Query: 57 LEKAITVKYPEQ------IYESMRYSVLAKGTKRAPPVMCVAACELF-GVNRIAAFPTAC 109
+E+ I PE+ I+E+M YS+ A G KR P++ C LF G A P
Sbjct: 20 IEQLIGTYLPEETGHQKTIFEAMNYSMKAGG-KRLRPMLMQEMCRLFTGTLLEAVIPFMA 78
Query: 110 ALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPP 169
A+EM+H +SL+HDDLPCMDDD RRG+ S YG DI +L GDAL F+ +
Sbjct: 79 AVEMIHTSSLVHDDLPCMDDDMMRRGKASTWAEYGEDIGVLTGDALMMYAFETAANAFET 138
Query: 170 HLVPE--PRVLRVIAEIARAVGSTGMAAGQFLDLE--GEP---NLVEFVQEKKFGEMSEC 222
+ P+ R+ R + +AR G GM GQ +D+E G P + +EF+ K G + E
Sbjct: 139 SIDPDELSRIGRAMGILARKTGVYGMIGGQTVDVELAGGPIPGDKLEFIYRLKTGALIEA 198
Query: 223 SAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGK 277
S + G L GA +++ + + +G+ +Q+ DDIL+ P ++K KK
Sbjct: 199 SMLIGAVLGGAAEEDCKIVESLAAKIGMAFQIQDDILDVTGSQDVTGKPSGSDEKNKK-T 257
Query: 278 SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGD 311
+YV G++KA + E++ +A EEL++ D
Sbjct: 258 TYVTLEGLDKAKKDVEQISTEAIEELNKLPGNND 291
>gi|345863395|ref|ZP_08815606.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl
pyrophosphate synthetase [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345125473|gb|EGW55342.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl
pyrophosphate synthetase [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 290
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 147/293 (50%), Gaps = 23/293 (7%)
Query: 51 TEIDQNLEKAITVKY--PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTA 108
++ L+K++ + P +++++MRY+VL G KR P++ A + GV A
Sbjct: 6 NRVEHALDKSLPAESTSPARLHQAMRYAVLGGG-KRIRPILTYATGQALGVEINQLDTAA 64
Query: 109 CALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTP 168
CA+EM+HA SL+HDDLP MDDD RRG+P+ H Y AIL GDAL FQ I +
Sbjct: 65 CAVEMIHAYSLVHDDLPAMDDDELRRGRPTCHKAYDEATAILVGDALQTQAFQIICTSGN 124
Query: 169 PHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG---EPNLVEF--VQEKKFGEMSECS 223
H E R L +I ++RA GS GM GQ LDL E +L E + K G + S
Sbjct: 125 LHASAETR-LEMIETLSRASGSRGMCGGQALDLNAVGQELSLAELENLHIHKTGALIRAS 183
Query: 224 AVCGGFLA-GADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK----- 277
LA + ++ L Y + VG+ +Q+ DDIL+ + T E K +GK
Sbjct: 184 VNTASLLAPRLEPEQAHQLDHYAKCVGLAFQIRDDILDVEGDT---ETLGKTQGKDQAQD 240
Query: 278 --SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
+Y A G+ A E A EL+A A L F D PL DY R++
Sbjct: 241 KPTYPALLGLNGAREKAAELQADAHRSLTGFDSKAD---PLRWLADYIIGRDY 290
>gi|350552260|ref|ZP_08921465.1| Geranyltranstransferase [Thiorhodospira sibirica ATCC 700588]
gi|349794913|gb|EGZ48721.1| Geranyltranstransferase [Thiorhodospira sibirica ATCC 700588]
Length = 294
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/274 (35%), Positives = 150/274 (54%), Gaps = 18/274 (6%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNR 101
L+ Y + T +D L+ T +P ++++MRYS + G KR P++ A + GV
Sbjct: 5 LREYQQRIETVLDHWLQPPTT--HPASLHQAMRYSAM-DGGKRIRPILVYATAKALGVPL 61
Query: 102 IAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQ 161
ACA+E++H SLIHDDLP MD+D RRG+P+ H + AILAGDA+ L FQ
Sbjct: 62 SCVDGPACAVELIHVYSLIHDDLPAMDNDDLRRGRPTCHKAFDEATAILAGDAMQALAFQ 121
Query: 162 HIVSHTPPHLVPEPRV-LRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEK-----K 215
+V T P + +P+V LR++ +ARA GS GMA GQ +DL ++ VQ + K
Sbjct: 122 ILV--TDPEMTEDPKVRLRMMEILARASGSRGMAGGQAIDLASVGQQIDLVQLEDMHIHK 179
Query: 216 FGEMSECSAVCGGF-LAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDE 269
G + S + G L D+ ++ L RY + +G+ +Q+ DDIL+ ++ T P+
Sbjct: 180 TGALIRASVLLGALSLVEIDEVRLEKLDRYAKCIGLAFQIRDDILDVESDTETLGKPQGS 239
Query: 270 EKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEEL 303
+ + K +Y A G+E + + A EL A E +
Sbjct: 240 DMAQNK-PTYPALIGMEASKQRARELVDDALESI 272
>gi|254513451|ref|ZP_05125516.1| geranyltranstransferase [Rhodobacteraceae bacterium KLH11]
gi|221532455|gb|EEE35451.1| geranyltranstransferase [Rhodobacteraceae bacterium KLH11]
Length = 301
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 153/300 (51%), Gaps = 27/300 (9%)
Query: 41 DLKTYWTTLITEIDQNLEKAI-------TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAA 93
DLKT+ I+ L+ + + K P ++ +MR+ VL G KR PV+ +
Sbjct: 4 DLKTHMAVQAIRIETRLDHLLGGSEFLESNKSPPRLLAAMRHGVL-NGGKRLRPVLVLEC 62
Query: 94 CELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGD 153
L G ACALE++H SL+HDDLP MD+D RRG+P+ H + ILAGD
Sbjct: 63 AALLGRCDEGVLDVACALELIHCYSLVHDDLPAMDNDDLRRGKPTVHRAFDEATGILAGD 122
Query: 154 ALFPLGFQHIVSHTPPHLVPEPRV-LRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQ 212
AL L F ++ H P+ + L++ E+++A G GMA GQ LDL+ E ++
Sbjct: 123 ALLTLAFD-VIGQEAAH--PDATIRLQLSRELSKASGVVGMAGGQMLDLQAEHCDRTEIE 179
Query: 213 EKKFGEMSECSAV-----CGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPR 267
KF M + + G LA A +D I L R+G +G+ +Q+ DD+L+ A +P
Sbjct: 180 IYKFHAMKTGALLRYACRAGAILADASNDNIDRLTRFGTTIGLSFQIADDLLDVVA-SP- 237
Query: 268 DEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
EE K GK + V +GVE++ + + L A AKE L+ F + + + +FI
Sbjct: 238 -EELGKATGKDADAGKATLVGLWGVERSRKELDWLLADAKELLEPFGATAETLNSIAAFI 296
>gi|334131672|ref|ZP_08505434.1| Geranyltranstransferase [Methyloversatilis universalis FAM5]
gi|333443145|gb|EGK71110.1| Geranyltranstransferase [Methyloversatilis universalis FAM5]
Length = 305
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 148/274 (54%), Gaps = 22/274 (8%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P +++++MRY+VL G KR P++C AA L G + A ACA+EM+HA SL+HDD+P
Sbjct: 41 PARLHDAMRYAVLGGG-KRVRPLLCHAAGALSGASAEALDAAACAVEMIHAYSLVHDDMP 99
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GD+L L F + H P VP +++++A
Sbjct: 100 CMDDDVLRRGKPTVHVQYDDATALLVGDSLQSLAFLLLAEHCP---VPADTRAALVSQLA 156
Query: 186 RAVGSTGMAAGQFLDLE--GEPNLV---EFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
A GS GMA GQ +DL G P V EF+ K G + C+ G D D
Sbjct: 157 IASGSRGMAGGQAIDLASVGLPLGVEELEFMHIHKTGALIRCAVRMGAACGHLDVDAHGR 216
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAE 293
L Y VG+L+QVVDD+L+ +A T EE K GK +YV+ G+ +A E A
Sbjct: 217 LDHYAGTVGLLFQVVDDVLDCEAST---EELGKTAGKDAAANKPTYVSTLGLARARERAR 273
Query: 294 ELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
EL A+A +D +GD L D+ R+
Sbjct: 274 ELHAEA---IDSLSLFGDAARRLRELADFVLTRK 304
>gi|304312212|ref|YP_003811810.1| polyprenyl synthetase [gamma proteobacterium HdN1]
gi|301797945|emb|CBL46167.1| Polyprenyl synthetase [gamma proteobacterium HdN1]
Length = 297
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/300 (34%), Positives = 147/300 (49%), Gaps = 16/300 (5%)
Query: 40 FDLKTYWTTLITEIDQNLEK--AITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
FDL Y T ++ LE A ++ E+M Y+V+ G KR PV+ AA E
Sbjct: 3 FDLHAYLQTAQFRVNTRLEYWFAKQNTTAAKLSEAMHYAVM-NGGKRLRPVLAFAAAEAC 61
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G + A ACALEM+H+ SL+HDDLP MD+D RRG P+ H + AILAGDAL
Sbjct: 62 GTDASLANDAACALEMLHSYSLVHDDLPAMDNDALRRGVPTCHIAFDEATAILAGDALQC 121
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQ 212
L F+ + S P + P L +I +A A G+ GMA GQ LDL L +E +
Sbjct: 122 LAFEVLASSELPSMTT-PIKLEMIRSLAVASGTHGMAGGQALDLAASGKLLDLHGLETIH 180
Query: 213 EKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKK 272
K G + + G A A + + +L +Y A+G+ YQV DDIL+ T +++
Sbjct: 181 RLKTGCLIRAAVRLGALAAHAPESSLLALDQYASALGLAYQVQDDILDVTGDTLTLGKQQ 240
Query: 273 KKKG----KSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
+Y G++ A +A L +A L + +GD PL + Y +R +
Sbjct: 241 GADAVLDKATYPRILGLQAAQALATHLHDQA---LQAIQGFGDGATPLRALASYIVNRRY 297
>gi|187735758|ref|YP_001877870.1| polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835]
gi|187425810|gb|ACD05089.1| Polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835]
Length = 297
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/245 (39%), Positives = 135/245 (55%), Gaps = 18/245 (7%)
Query: 42 LKTYWTTLITEIDQNLEKAITVK--YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
L Y T ID L++ + + PE I+++MRYS+ A G KR PV+C+AA E G
Sbjct: 6 LNDYITEQCALIDAALDRLLPAEDESPETIHKAMRYSIFAGG-KRMRPVLCLAAAEACGG 64
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+ A ACA+EM+H SLIHDDLP MD+D RRG+P++H +G +AILAGDAL
Sbjct: 65 LAVDALVPACAVEMMHTYSLIHDDLPAMDNDDLRRGKPTSHKAFGEGVAILAGDALLTEA 124
Query: 160 FQHI--VSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQ 212
F I V T + V + + E+A GST + GQ LDLEGE V V
Sbjct: 125 FAVIAQVDDTERYTVRD-----YVRELAATGGSTMLIGGQILDLEGEHKQLSEPEVRTVY 179
Query: 213 EKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKK 272
E K + + GG A A + ++++L +G +G+ +QV+DDIL+ A T E+
Sbjct: 180 EGKTAALLTTALRFGGMSANATESQLEALTDFGYNLGLAFQVIDDILDLTAST---EKLG 236
Query: 273 KKKGK 277
K GK
Sbjct: 237 KTAGK 241
>gi|94500549|ref|ZP_01307080.1| Polyprenyl synthetase [Bermanella marisrubri]
gi|94427339|gb|EAT12318.1| Polyprenyl synthetase [Bermanella marisrubri]
Length = 294
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/272 (36%), Positives = 145/272 (53%), Gaps = 17/272 (6%)
Query: 67 EQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPC 126
+++ ++M YS+L G KR P+M A + AA A A+EM+HA SL+HDDLP
Sbjct: 30 QRLKDAMTYSLL-NGGKRVRPLMVYATTRSLSGDLQAADQCALAVEMIHAYSLVHDDLPA 88
Query: 127 MDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIAR 186
MDDD RRGQP+ H + AILAGDAL FQ +V P + + LR++ +A
Sbjct: 89 MDDDELRRGQPTCHIAFDEATAILAGDALQTQAFQVLVQ--PIDGMAPQQQLRMVQTLAH 146
Query: 187 AVGSTGMAAGQFLDLEGEPNLV--EFVQE---KKFGEMSECSAVCGGFLAGADDDEIQSL 241
A G GMA GQ LDLE V E++Q K G + E S GG A A + ++ L
Sbjct: 147 ASGLAGMAGGQSLDLEAVDKQVDIEYLQNMHLHKTGALIEASVKLGGLCANASEQQLSYL 206
Query: 242 RRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYVAFYGVEKAMEVAEELR 296
Y +A+G+ +QV DDIL+ + T P+ ++ + K +YV+ G++ A A++L
Sbjct: 207 SVYAQAIGLAFQVQDDILDVISDTRTLGKPQGSDESRNK-PTYVSLLGLDGAKRKAQDLH 265
Query: 297 AKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
+A+ D +K + PL Y +R +
Sbjct: 266 QQAR---DALRKLDADTSPLEDIARYIIERTY 294
>gi|423612401|ref|ZP_17588262.1| hypothetical protein IIM_03116 [Bacillus cereus VD107]
gi|401245990|gb|EJR52342.1| hypothetical protein IIM_03116 [Bacillus cereus VD107]
Length = 297
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/267 (36%), Positives = 152/267 (56%), Gaps = 17/267 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + E+M YS L G KR P++ A + FG R ACALEM+H SLIHDDLP
Sbjct: 31 PNVLREAMAYS-LEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDDLP 89
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH V+G +A+LAGD L FQ I+++ P + E +V R++ E+A
Sbjct: 90 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEPKEISAEKKV-RLVLELA 148
Query: 186 RAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM AGQ D+E E N +E++ + K G++ E + + G L+ A +++ +
Sbjct: 149 KAAGPEGMVAGQVADMEAEGKRLTINELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEK 208
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVAE 293
L + + +G+ +Q+ DDIL+ + +EE K G +Y + V++A + E
Sbjct: 209 LLTFAKYIGLAFQIRDDILDVEGT---EEEIGKPIGSDASNEKSTYTTLFTVDRAKSILE 265
Query: 294 ELRAKAKEELDRFKKYGDNVLPLYSFI 320
E AKAK+ ++ + + +L + I
Sbjct: 266 ETIAKAKDAINSLQLQDEYLLSICDLI 292
>gi|189218412|ref|YP_001939053.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum
V4]
gi|189185270|gb|ACD82455.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum
V4]
Length = 300
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/279 (34%), Positives = 143/279 (51%), Gaps = 14/279 (5%)
Query: 53 IDQNLEKAIT--VKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACA 110
++ L K +T K P ++E++ Y + + G KR P++C+A N A P ACA
Sbjct: 20 VESALRKFVTGKAKKPRILHEAIDYCLFS-GGKRLRPILCLAGAHAVCRNSDCALPMACA 78
Query: 111 LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPH 170
+E +H SL+HDDLP MD+D RRG+PS H +YG +AIL GDAL L F+ + S P
Sbjct: 79 VECIHTYSLVHDDLPSMDNDDFRRGKPSLHKIYGEALAILTGDALLALAFE-VASLCSPL 137
Query: 171 LVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAV 225
P V ++I E+AR GS + AGQ DLE E + ++ +K + S
Sbjct: 138 GRTYP-VSQMIWELARTAGSRALVAGQVADLEAEGKEIGLTQLRYIHCRKTAALITTSLR 196
Query: 226 CGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT----PRDEEKKKKKGKSYVA 281
G A AD + + RYGRA+G+ +Q++DDIL+ T + +K K +Y
Sbjct: 197 LGAMAADADKKTLDLITRYGRALGLAFQIIDDILDVTQTTEILGKSAGKDQKAKKATYPR 256
Query: 282 FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
G+E + E A KA + + G + L +F+
Sbjct: 257 IMGLEYSKEAAAYYTQKALRYASKLGEKGRLLSDLANFL 295
>gi|164688608|ref|ZP_02212636.1| hypothetical protein CLOBAR_02253 [Clostridium bartlettii DSM
16795]
gi|164603021|gb|EDQ96486.1| polyprenyl synthetase [Clostridium bartlettii DSM 16795]
Length = 295
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 144/273 (52%), Gaps = 16/273 (5%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
Y + I+E+M YS L+ G KR P++ + + ++ G + P A+EM+H SLIHDDL
Sbjct: 28 YQKTIFEAMNYS-LSSGGKRLRPILTLESAKIIGGDVKEVIPFCVAIEMIHTYSLIHDDL 86
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MD+D RRG+P+NH V+G +A LAGDAL F+ ++ + + R L+ I EI
Sbjct: 87 PAMDNDDFRRGKPTNHKVFGDGMATLAGDALLNYAFEIMLKESLGKENADIR-LKAIYEI 145
Query: 185 ARAVGSTGMAAGQFLDLEGEPNLVE-----FVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
AR G GM GQ +D+E E +E F+ K M G + A +D++Q
Sbjct: 146 ARGAGIYGMIGGQVVDIESENKSIEKEKLDFIHMNKTAAMIIGCMRAGAIMGNACEDDLQ 205
Query: 240 SLRRYGRAVGVLYQVVDDIL-----EAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEE 294
++ +Y + +G+ +Q+VDDIL E P + + K +Y + G++++ +VA +
Sbjct: 206 NITKYAKNIGLAFQIVDDILDIVGDEKALGKPVGSDIENHK-STYPSLIGLDESKKVATD 264
Query: 295 LRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
L +AK D +K L DY R+
Sbjct: 265 LIKEAK---DSIRKISGESRFLEDLADYIISRD 294
>gi|317051795|ref|YP_004112911.1| polyprenyl synthetase [Desulfurispirillum indicum S5]
gi|316946879|gb|ADU66355.1| Polyprenyl synthetase [Desulfurispirillum indicum S5]
Length = 296
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 143/265 (53%), Gaps = 19/265 (7%)
Query: 53 IDQNLEKAITVK---YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTAC 109
I+Q LE+ ++ I+E+M YSV A G KR P++C+ + AC
Sbjct: 15 INQRLEELLSPSDEPLLTTIHEAMLYSVRAGG-KRLRPLLCLLTAGALRQDESRVLDIAC 73
Query: 110 ALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPP 169
A+EM+H SLIHDDLP +D+D RRG+P+NH VYG +AILAGDAL F+ ++ P
Sbjct: 74 AIEMIHTYSLIHDDLPALDNDDLRRGKPTNHRVYGEAMAILAGDALLNRAFE-VLCQLP- 131
Query: 170 HLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVE-----FVQEKKFGEMSECSA 224
L P+ V+RVIAEIA + G+ GM GQ +D++ E ++ ++ E K G +
Sbjct: 132 -LAPD-LVIRVIAEIASSSGTAGMIGGQVVDIQSEGKSIDMPTMRYIHENKTGRIIRSCL 189
Query: 225 VCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL-----EAKAQTPRDEEKKKKKGKSY 279
V A ++I+ RYG +G+ +Q+ DDIL EA P + + +K ++
Sbjct: 190 VSSAIACQATAEQIELFDRYGYNIGLAFQIADDILDIEGDEATMGKPVGSDLQNRK-STW 248
Query: 280 VAFYGVEKAMEVAEELRAKAKEELD 304
A G+ A + +E+ +A LD
Sbjct: 249 PALVGMNGARKAMQEMIDEANRALD 273
>gi|225849919|ref|YP_002730153.1| geranyltranstransferase (Farnesyl-diphosphate synthase)
[Persephonella marina EX-H1]
gi|225646113|gb|ACO04299.1| geranyltranstransferase (Farnesyl-diphosphate synthase)
[Persephonella marina EX-H1]
Length = 290
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 148/279 (53%), Gaps = 15/279 (5%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
D+K + I++ +++ PE+++++M YS L+ G KR P++ + + + G+
Sbjct: 1 MDVKHFLAKQSVFINEQIKRLTPSGIPEKLFDAMAYS-LSAGGKRLRPILVLESAKAVGM 59
Query: 100 NRIAAF-PTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
I A A E +H SLIHDDLP MDDD RRG+P+ H VYG IAILAGD L
Sbjct: 60 EDIKDIVDIAVATEFIHTYSLIHDDLPAMDDDELRRGKPTCHIVYGEAIAILAGDGLQSY 119
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL----EGEPNLVEFVQEK 214
F+ I + VP ++L+VI ++ G GM GQ D+ E N + F+
Sbjct: 120 AFELI---SKNRTVPPDKLLKVINILSHGTGIYGMVGGQAADILHEKENSFNDINFIHTH 176
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL-----EAKAQTPRDE 269
K + + GG LA A ++E SL+ YG +G+ +Q+ DDIL E K +
Sbjct: 177 KTAKFIQSCCQMGGVLADATEEEEISLKNYGLYIGLAFQIQDDILDEIGDEKKLGKKTKK 236
Query: 270 EKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKK 308
++ K K +Y + YG+E++ +A E KA E+++ K+
Sbjct: 237 DRDKNK-LTYPSIYGIEESKRIAREYVEKAVSEVEKLKR 274
>gi|146319308|ref|YP_001199020.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33]
gi|146321511|ref|YP_001201222.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis 98HAH33]
gi|253752341|ref|YP_003025482.1| geranyltranstransferase [Streptococcus suis SC84]
gi|253754167|ref|YP_003027308.1| geranyltranstransferase [Streptococcus suis P1/7]
gi|253756101|ref|YP_003029241.1| geranyltranstransferase [Streptococcus suis BM407]
gi|386578477|ref|YP_006074883.1| polyprenyl synthetase [Streptococcus suis GZ1]
gi|386580550|ref|YP_006076955.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis JS14]
gi|386582624|ref|YP_006079028.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis SS12]
gi|386588746|ref|YP_006085147.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis A7]
gi|389857159|ref|YP_006359402.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis ST1]
gi|403062097|ref|YP_006650313.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis S735]
gi|145690114|gb|ABP90620.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 05ZYH33]
gi|145692317|gb|ABP92822.1| Geranylgeranyl pyrophosphate synthase [Streptococcus suis 98HAH33]
gi|251816630|emb|CAZ52270.1| putative geranyltranstransferase [Streptococcus suis SC84]
gi|251818565|emb|CAZ56398.1| putative geranyltranstransferase [Streptococcus suis BM407]
gi|251820413|emb|CAR47048.1| putative geranyltranstransferase [Streptococcus suis P1/7]
gi|292558940|gb|ADE31941.1| Polyprenyl synthetase [Streptococcus suis GZ1]
gi|319758742|gb|ADV70684.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis JS14]
gi|353734770|gb|AER15780.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis SS12]
gi|353740877|gb|AER21884.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis ST1]
gi|354985907|gb|AER44805.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis A7]
gi|402809423|gb|AFR00915.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis S735]
Length = 289
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 147/271 (54%), Gaps = 25/271 (9%)
Query: 55 QNLEKAITVKYPEQIYESMRYSVL---AKGTKRAPPVMCVAACELFGVN-RIAAFPTACA 110
Q LE+A+ Y Q+ E + SVL G KR P++ + E FG+ + A + A
Sbjct: 7 QRLEEAMADFYQPQVAERLNQSVLYSLQAGGKRIRPLLLLTILESFGMELKQAHYQVAAC 66
Query: 111 LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF--PLGFQHIVSHTP 168
+E++H SLIHDDLP MD+D RRG+ +NH VY AILAGD+LF P GF V
Sbjct: 67 VELIHTGSLIHDDLPAMDNDDYRRGRLTNHKVYDEATAILAGDSLFLDPFGFLAQVD--- 123
Query: 169 PHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE-PNL----VEFVQEKKFGEMSECS 223
+P +L ++ E+++A G+ GM AGQ LD+ GE NL ++ + K G++
Sbjct: 124 ---LPAETILALVRELSQASGTFGMVAGQVLDMAGEGQNLTLEQLQAIHANKTGKLLTFP 180
Query: 224 AVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA------QTPRDEEKKKKKGK 277
V G +AG D I LR+ G+ +G+ +QV DDIL+ A +TP+ + +K
Sbjct: 181 FVAAGLIAGQSDVVINHLRQAGQLIGLAFQVRDDILDVTATFEEIGKTPQKDVLAEK--S 238
Query: 278 SYVAFYGVEKAMEVAEELRAKAKEELDRFKK 308
+Y A G+E + E+ +A ELD+ K
Sbjct: 239 TYPALMGLEASKVFLEDSLNQAINELDQVAK 269
>gi|392378577|ref|YP_004985737.1| farnesyl diphosphate synthase [Azospirillum brasilense Sp245]
gi|356880059|emb|CCD01006.1| farnesyl diphosphate synthase [Azospirillum brasilense Sp245]
Length = 296
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 152/293 (51%), Gaps = 14/293 (4%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAI-TVKYPE-QIYESMRYSVLAKGTKRAPPVMCVAACEL 96
Q DLKT + ++++ + + T PE ++ E+MRY L G KR P + + L
Sbjct: 2 QTDLKTAMADMAADVERAILHLLPTTDLPESRVLEAMRYGCL-NGGKRLRPFLVCQSAAL 60
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
FGVN A A A+E VH+ SL+HDDLP MDD RRGQP+ H + AILAGD L
Sbjct: 61 FGVNPDCALRVAVAVEFVHSYSLVHDDLPAMDDGDLRRGQPTVHRKFDEATAILAGDGLL 120
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----V 211
F+ +++ H P R +++A +A+A G GM GQ LDL E + +
Sbjct: 121 TYAFE-VLADPATHEDPNVRC-QLVAALAKAAGPHGMVGGQMLDLIAEHETFDLGTTTRL 178
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILE---AKAQTPRD 268
Q K G+M S GG L A + +LR Y +G+ +Q+VDD+L+ +A+T +
Sbjct: 179 QRMKTGDMIAFSCEAGGILGKAPPPQRLALRAYAHDLGLAFQIVDDLLDIEGTEAETGKS 238
Query: 269 EEKKKKKGKS-YVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+ + GKS +V+ G ++A A L +AK L+ F D + + F+
Sbjct: 239 VGRDAEAGKSTFVSILGQDRARSQAAMLAVQAKAHLEIFDGRADILKAVADFV 291
>gi|146337687|ref|YP_001202735.1| geranyltranstransferase [Bradyrhizobium sp. ORS 278]
gi|146190493|emb|CAL74492.1| Putative Geranyltranstransferase (Farnesyl-diphosphate synthase)
(FPP synthase) [Bradyrhizobium sp. ORS 278]
Length = 306
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/285 (36%), Positives = 144/285 (50%), Gaps = 18/285 (6%)
Query: 49 LITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTA 108
L+ E+ + A + P+++ ESMRYS L G KR P + V + +FGV R A
Sbjct: 22 LLGELLSDAPLADEIARPKRLIESMRYSSLGGG-KRLRPFLVVESAAVFGVPRRGALMAG 80
Query: 109 CALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTP 168
ALE +H SLIHDDLP MD+ RRG+P+ H VY AILAGDAL + F I++
Sbjct: 81 AALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKVYDDATAILAGDALLTIAFD-IITRDE 139
Query: 169 PHLVPEPRV-LRVIAEIARAVGSTGMAAGQFLDLEGE-------PNLVEFVQEKKFGEMS 220
H P+ V L + +AR G GMA GQ LDL GE P V VQ+ K G +
Sbjct: 140 IH--PDAGVRLALTRALARCAGVGGMAGGQILDLAGEGRFGDRDPVDVARVQQMKTGALL 197
Query: 221 ECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL--EAKAQT---PRDEEKKKKK 275
+ G L A E ++L YGRA+G +Q+ DD+L E A T P + + K
Sbjct: 198 RFGCIAGALLGQASAAEYKALDDYGRALGEAFQIADDLLDVEGDAATLGKPAGADAELGK 257
Query: 276 GKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
++V G+E A + +L A+ L F GD + F+
Sbjct: 258 -TTFVTQLGIEGAKQRVRDLLARGDAALSIFGAKGDVLRAAAHFV 301
>gi|316931945|ref|YP_004106927.1| polyprenyl synthetase [Rhodopseudomonas palustris DX-1]
gi|315599659|gb|ADU42194.1| Polyprenyl synthetase [Rhodopseudomonas palustris DX-1]
Length = 308
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/303 (33%), Positives = 152/303 (50%), Gaps = 24/303 (7%)
Query: 32 ASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCV 91
A +L ST D + L+++ E + P ++ E++RYS L G KR P + V
Sbjct: 11 AKRLDSTAEDTEALLGRLLSDELMTDE----IARPRRLMEAIRYSTLGGG-KRLRPFLAV 65
Query: 92 AACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILA 151
+ +FG++R AA ALE +H SLIHDDLP MDD RRG+P+ H Y AILA
Sbjct: 66 ESAAVFGIDRDAALLVGAALECIHCYSLIHDDLPAMDDSDLRRGRPTLHKAYDDATAILA 125
Query: 152 GDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG-------E 204
GDAL F IV+ H P R++ + +AR G GM GQ LDL G E
Sbjct: 126 GDALLTFAFD-IVTRDEVHTDPTVRLM-LTRVLARCAGLGGMVGGQMLDLAGEGRFGDRE 183
Query: 205 PNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQ 264
P V +Q+ K G + V G L A+ ++ ++L YGRA+G +Q+ DD+L+ ++
Sbjct: 184 PVDVAKLQQMKTGALLRYGCVAGAILGQANAEQYRALDDYGRALGEAFQIADDLLDVESD 243
Query: 265 TPRDEEKKKKKG-------KSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLY 317
E K G ++V G++ A + +L A+A + L F + GD +
Sbjct: 244 A---EALGKPAGADAALGKTTFVTQLGIDGAKQRLRDLIARADQALAPFGERGDVLRAAA 300
Query: 318 SFI 320
F+
Sbjct: 301 RFV 303
>gi|386586739|ref|YP_006083141.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis D12]
gi|353738885|gb|AER19893.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis D12]
Length = 289
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 147/271 (54%), Gaps = 25/271 (9%)
Query: 55 QNLEKAITVKYPEQIYESMRYSVL---AKGTKRAPPVMCVAACELFGVN-RIAAFPTACA 110
Q LE+A+ Y Q+ E + SVL G KR P++ + E FG+ + A + A
Sbjct: 7 QRLEEAMADFYQPQVAERLNQSVLYSLQAGGKRIRPLLLLTILESFGMELKQAHYQVAAC 66
Query: 111 LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF--PLGFQHIVSHTP 168
+E++H SLIHDDLP MD+D RRG+ +NH VY AILAGD+LF P GF V
Sbjct: 67 VELIHTGSLIHDDLPAMDNDDYRRGRLTNHKVYDEATAILAGDSLFLDPFGFLAQVD--- 123
Query: 169 PHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE-PNL----VEFVQEKKFGEMSECS 223
+P +L ++ E+++A G+ GM AGQ LD+ GE NL ++ + K G++
Sbjct: 124 ---LPAETILALVRELSQASGTFGMVAGQVLDMAGEGQNLTLEQLQAIHANKTGKLLTFP 180
Query: 224 AVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA------QTPRDEEKKKKKGK 277
V G +AG D I LR+ G+ +G+ +QV DDIL+ A +TP+ + +K
Sbjct: 181 FVAAGLIAGQSDVVISHLRQAGQLIGLAFQVRDDILDVTATFEEIGKTPQKDVLAEK--S 238
Query: 278 SYVAFYGVEKAMEVAEELRAKAKEELDRFKK 308
+Y A G+E + E+ +A ELD+ K
Sbjct: 239 TYPALMGLEASKVFLEDSLNQAINELDQVAK 269
>gi|338812850|ref|ZP_08625003.1| geranylgeranyl pyrophosphate synthase [Acetonema longum DSM 6540]
gi|337275149|gb|EGO63633.1| geranylgeranyl pyrophosphate synthase [Acetonema longum DSM 6540]
Length = 295
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/265 (41%), Positives = 147/265 (55%), Gaps = 17/265 (6%)
Query: 42 LKTYWTTLITEIDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
LK Y + ID LE + +YP I E+MRYSV A G KR PV+ +AA +
Sbjct: 5 LKEYCRQKVACIDHKLELLLPKQGQYPPVILEAMRYSVFA-GGKRMRPVLLMAAADAVNG 63
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A LEM+H SLIHDDLP MDDD RRG+P+NH VYG +AILAGDAL
Sbjct: 64 RGEEYTHVAAGLEMIHTYSLIHDDLPAMDDDDYRRGKPTNHKVYGEAMAILAGDALLTYA 123
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEK 214
F+ ++ P V +LRVIAEIA AVG GM GQ +DL E +E++ +
Sbjct: 124 FE-VMGRQPD--VLSDVLLRVIAEIAAAVGPLGMVGGQAMDLFSEGKQIGLQEIEYLHKA 180
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL-----EAKAQTPRDE 269
K G + + S G LAGA ++++Q L +Y G+ +Q+ DDIL +A+ P
Sbjct: 181 KTGALFKASIRAGAMLAGAGEEQLQDLTQYSDYFGLAFQITDDILDVTGNQAELGKPVGS 240
Query: 270 EKKKKKGKSYVAFYGVEKAMEVAEE 294
+ K +K +YV+ Y V+KA +A E
Sbjct: 241 DSKNQKA-TYVSLYSVDKAKSIAGE 264
>gi|417092358|ref|ZP_11957092.1| geranyltranstransferase [Streptococcus suis R61]
gi|353532927|gb|EHC02596.1| geranyltranstransferase [Streptococcus suis R61]
Length = 289
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 146/271 (53%), Gaps = 25/271 (9%)
Query: 55 QNLEKAITVKYPEQIYESMRYSVL---AKGTKRAPPVMCVAACELFGVN-RIAAFPTACA 110
Q LE+ + Y Q+ E + SVL G KR P++ + E FG+ + A + A
Sbjct: 7 QRLEETMADFYQSQVAERLNQSVLYSLQAGGKRIRPLLLLTILESFGMELKQAHYQVAAC 66
Query: 111 LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF--PLGFQHIVSHTP 168
+E++H SLIHDDLP MD+D RRG+ +NH VY AILAGD+LF P GF V
Sbjct: 67 VELIHTGSLIHDDLPAMDNDDYRRGRLTNHKVYDEATAILAGDSLFLDPFGFLAQVD--- 123
Query: 169 PHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE-PNL----VEFVQEKKFGEMSECS 223
+P +L ++ E+++A G+ GM AGQ LD+ GE NL ++ + K G++
Sbjct: 124 ---LPAETILALVRELSQASGTFGMVAGQVLDMAGEGQNLTLEQLQAIHANKTGKLLTFP 180
Query: 224 AVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA------QTPRDEEKKKKKGK 277
V G +AG D I LR+ G+ +G+ +QV DDIL+ A +TP+ + +K
Sbjct: 181 FVAAGLIAGQSDVVINHLRQAGQLIGLAFQVRDDILDVTATFEEIGKTPQKDVLAEK--S 238
Query: 278 SYVAFYGVEKAMEVAEELRAKAKEELDRFKK 308
+Y A G+E + E+ +A ELD+ K
Sbjct: 239 TYPALMGLEASKVFLEDSLNQAINELDQVAK 269
>gi|296126942|ref|YP_003634194.1| polyprenyl synthetase [Brachyspira murdochii DSM 12563]
gi|296018758|gb|ADG71995.1| Polyprenyl synthetase [Brachyspira murdochii DSM 12563]
Length = 294
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 158/281 (56%), Gaps = 18/281 (6%)
Query: 40 FDLKTYWTTLITEIDQNLEKAIT---VKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
+LK Y + +I+ N+E ++ E ++Y + A G KR PV+ + ACEL
Sbjct: 1 MNLKEYMNIRLKDINNNIENIFDKSDIELENSFIEMLKYPLDA-GGKRLRPVLTLLACEL 59
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
F + A A +LE++H SL+HDDLP MD+D RRG+P+ H YG AIL GD L
Sbjct: 60 FEGDYKKAVIPAVSLELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGLL 119
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL---EGEPN--LVEFV 211
FQ ++S V + + +++ E++ A G GM GQF+DL E E N +++ +
Sbjct: 120 THAFQ-LLSKAD---VKDSTLRKLLFELSYAAGINGMVMGQFIDLYYEEKEINFDMLKVL 175
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP---RD 268
KK M AV G ++ +D++I+++ +YG A+G+ +Q+ DDIL+ + +
Sbjct: 176 HAKKTAAMIR-GAVRLGAISSENDNDIENITKYGEAIGLAFQIQDDILDVISDNETLGKT 234
Query: 269 EEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKK 308
K +K+GK +YV +G+E A + A+++ KA E L+ +K+
Sbjct: 235 VGKDEKEGKLTYVKQFGLEGAKKEAKKVTEKAIEYLNPYKE 275
>gi|367472887|ref|ZP_09472460.1| putative Geranyltranstransferase (Farnesyl-diphosphate synthase)
(FPP synthase) [Bradyrhizobium sp. ORS 285]
gi|365274857|emb|CCD84928.1| putative Geranyltranstransferase (Farnesyl-diphosphate synthase)
(FPP synthase) [Bradyrhizobium sp. ORS 285]
Length = 306
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/285 (36%), Positives = 143/285 (50%), Gaps = 18/285 (6%)
Query: 49 LITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTA 108
L+ E+ + A + P+++ ESMRYS L G KR P + V + +FGV R A
Sbjct: 22 LLGELLSDAPMADEIARPKRLIESMRYSSLGGG-KRLRPFLVVESAAVFGVPRRGALMAG 80
Query: 109 CALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTP 168
ALE +H SLIHDDLP MD+ RRG+P+ H Y AILAGDAL + F I++
Sbjct: 81 AALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKAYDDATAILAGDALLTIAFD-IITRDE 139
Query: 169 PHLVPEPRV-LRVIAEIARAVGSTGMAAGQFLDLEGE-------PNLVEFVQEKKFGEMS 220
H P+ V L + +AR G GMA GQ LDL GE P V VQ+ K G +
Sbjct: 140 IH--PDAGVRLALTRALARCAGVGGMAGGQILDLAGEGRFGDRDPVDVARVQQMKTGALL 197
Query: 221 ECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL--EAKAQT---PRDEEKKKKK 275
+ G L A E Q+L YGRA+G +Q+ DD+L E A T P + + K
Sbjct: 198 RFGCIAGALLGQASPAEYQALDDYGRALGEAFQIADDLLDVEGDAATLGKPAGADAELGK 257
Query: 276 GKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
++V G+E A + +L A+ L F GD + F+
Sbjct: 258 -TTFVTQLGIEGAKQRVRDLLARGDAALSIFGAKGDVLRAAAHFV 301
>gi|92116242|ref|YP_575971.1| polyprenyl synthetase [Nitrobacter hamburgensis X14]
gi|91799136|gb|ABE61511.1| farnesyl-diphosphate synthase [Nitrobacter hamburgensis X14]
Length = 308
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/306 (35%), Positives = 153/306 (50%), Gaps = 23/306 (7%)
Query: 34 QLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAA 93
+L +T + +T TL++ D L I P+++ ++MRYS L G KR P + V +
Sbjct: 13 RLDTTADETETLLGTLLS--DAVLPDEIA--RPKRLMDAMRYSSLGGG-KRLRPFLVVES 67
Query: 94 CELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGD 153
+FGV R +A ALE +H SLIHDDLP MD+ RRG+P+ H AILAGD
Sbjct: 68 SAVFGVPRDSALLAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKTADDATAILAGD 127
Query: 154 ALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG-------EPN 206
L L F I++ H P R+L A +ARA G GM GQ LDL G EP
Sbjct: 128 GLLTLAFD-IITRDEVHQDPAVRLLLTRA-LARAAGIGGMVGGQMLDLAGEGRFGDREPV 185
Query: 207 LVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT- 265
V +Q+ K G + + G L A + Q+L YGRA+G +Q+ DD+L+ +
Sbjct: 186 DVARLQQMKTGALLRFGCISGALLGQASQKDYQALDAYGRALGEAFQIADDLLDVEGDAA 245
Query: 266 ----PRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFID 321
P + K ++V G++ A + +L AKA E L F GD + F+
Sbjct: 246 ALGKPAGADAALGK-TTFVTQLGIDGAKKRVRDLLAKADEALSAFGARGDVLRAAAHFV- 303
Query: 322 YAADRE 327
ADR+
Sbjct: 304 --ADRK 307
>gi|423205490|ref|ZP_17192046.1| hypothetical protein HMPREF1168_01681 [Aeromonas veronii AMC34]
gi|404624031|gb|EKB20876.1| hypothetical protein HMPREF1168_01681 [Aeromonas veronii AMC34]
Length = 296
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/270 (37%), Positives = 140/270 (51%), Gaps = 17/270 (6%)
Query: 68 QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCM 127
++ ++M Y +L G KR P + A E+ GV A A+E +HA SL+HDDLP M
Sbjct: 31 RLRDAMSYGLLLGG-KRVRPFLVYAVGEMLGVKSELLDGPAAAVECIHAYSLLHDDLPAM 89
Query: 128 DDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARA 187
D+D RRGQP+ H + AILAGDAL L F + H P + RV R+++ +ARA
Sbjct: 90 DNDDLRRGQPTVHKAFDEGTAILAGDALQTLAFSILADHPMPDTLMANRV-RMLSTLARA 148
Query: 188 VGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFL-AGADDDEIQSL 241
G GM GQ LDL+ E + E V K G + EC+ G A DD + +L
Sbjct: 149 SGYLGMCGGQALDLQAEGRQISLAELEQVHRHKTGALIECAVALGALCKADVDDATLAAL 208
Query: 242 RRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYVAFYGVEKAMEVAEELR 296
+ Y A+G+ +QV DDIL+ T P+ + +K +Y A G+E A E+A EL
Sbjct: 209 QTYAAAIGLAFQVQDDILDITGDTATLGKPQGSDLALEK-STYPALLGLENARELARELH 267
Query: 297 AKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
KA L Y ++L +F DY +R
Sbjct: 268 GKALTALQSL-PYNTDILE--AFADYIIER 294
>gi|91787628|ref|YP_548580.1| farnesyl-diphosphate synthase [Polaromonas sp. JS666]
gi|91696853|gb|ABE43682.1| farnesyl-diphosphate synthase [Polaromonas sp. JS666]
Length = 306
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 156/305 (51%), Gaps = 26/305 (8%)
Query: 40 FDLKTYWTTLITEIDQNLEKAIT----VKYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
F L + + I+Q L + + P + ++MRY+VL G KR P++ +AACE
Sbjct: 10 FTLSAWSAQQLETIEQALSRWVACPTDAPAPAGLGDAMRYAVL-DGGKRLRPLLVMAACE 68
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
N AA +ACA+E++HA SL+HDD+PCMD+D RRG+P+ H +G A+LAGDAL
Sbjct: 69 AVNGNAEAALRSACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVKFGEAQALLAGDAL 128
Query: 156 FPLGFQHIVSHTPP----HLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLE--GEP---N 206
L F+ + TP + R+ R++A+ A G GMA GQ +DL G P
Sbjct: 129 QALAFEFL---TPDDGSVDAATQARLCRMLAQ---AAGFQGMAGGQAIDLASVGLPLTSG 182
Query: 207 LVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP 266
+ + K G + + S + G A +LR YG AVG+ +QVVDDIL+ A +
Sbjct: 183 QLHEMHRLKTGALLQASVMMGTACGAAPPAAQHALREYGAAVGLAFQVVDDILDVTADSA 242
Query: 267 RDEEKKKKKGK----SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
+ K ++V+ G++ + + A++L KA LD N L++ D
Sbjct: 243 TLGKTAGKDAAQDKPTFVSLMGLQASKDYAQQLLGKALASLDASGL--GNTHALHALADM 300
Query: 323 AADRE 327
+R
Sbjct: 301 LVNRH 305
>gi|49476181|ref|YP_034222.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
henselae str. Houston-1]
gi|49238989|emb|CAF28289.1| Geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
henselae str. Houston-1]
Length = 300
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 149/292 (51%), Gaps = 25/292 (8%)
Query: 48 TLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPT 107
TL+++ QN E + PE + ++MRY VL G KR P + + +C LF + +
Sbjct: 21 TLLSDQVQNGE----IARPEILLKAMRYGVL-NGGKRLRPFLVIQSCALFDIPIEYSLNV 75
Query: 108 ACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHT 167
A ALE +H SLIHDDLP MD+D RRGQP+ H + AILAG+AL F+ I++H
Sbjct: 76 ASALECIHCYSLIHDDLPAMDNDTLRRGQPTVHIAFDEATAILAGNALLTFAFE-IIAHK 134
Query: 168 PPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSEC 222
L E R+ R+I +A+A G GM GQ LDLE E + +Q K +
Sbjct: 135 TSELSFETRI-RLITALAQASGLGGMIGGQMLDLEAEKKPQESKDITTLQHMKTATLISF 193
Query: 223 SAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP-------RDEEKKKKK 275
+ G + A + + L +G +G+ +Q+ DD+L+ A T +DE K
Sbjct: 194 ACQAGAIIGNASQELTEKLAAFGTYLGLAFQLTDDLLDVTASTKVLGKTAGKDETAHK-- 251
Query: 276 GKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+++ YG+E+ + +EL A+A+ L F G PL ++A R+
Sbjct: 252 -ATFIRLYGIEETQKKRDELIAQAEALLLPF---GAKATPLQQAARFSATRK 299
>gi|304415488|ref|ZP_07396128.1| geranyltranstransferase [Candidatus Regiella insecticola LSR1]
gi|304282658|gb|EFL91181.1| geranyltranstransferase [Candidatus Regiella insecticola LSR1]
Length = 313
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 148/282 (52%), Gaps = 20/282 (7%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITV--KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
D T +D+ L+ I + Q+ E++RY+VL G KR P + A ++F
Sbjct: 8 IDFHQQLTLYQRRVDEKLKNFIQPLPSHSRQLIEAIRYTVLC-GGKRIRPYLVYATGKMF 66
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G++ + A A+E +HA SL+HDDLP MDDD RRGQPS H +G IAILAGDAL
Sbjct: 67 GLSPGSLDVAAAAVECIHAYSLVHDDLPAMDDDNLRRGQPSCHIKFGEAIAILAGDALQT 126
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQ 212
L F + P++ E R L++++E+A+A+G+ GM AGQ LDL E + E +
Sbjct: 127 LAFSLLADQPMPNVTLENR-LKIVSELAKAIGAGGMCAGQALDLAAEHCQISLASLEKIH 185
Query: 213 EKKFGEMSECSAVCGGFLAGADDDEIQS-LRRYGRAVGVLYQVVDDILEAKAQTPR---- 267
K G + + G AG ++ S L Y A+G+ +QV DDIL+ +T R
Sbjct: 186 RHKTGALIRAAVRIGALAAGERSEKTLSLLDDYADAIGLAFQVQDDILDITGETDRMGKQ 245
Query: 268 ---DEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRF 306
D+++ K +Y + G+E A A++ A+ LD
Sbjct: 246 QGADQQRNK---STYSSLLGLEGAKIKAKKFCQDAQIALDSL 284
>gi|218778692|ref|YP_002430010.1| polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01]
gi|218760076|gb|ACL02542.1| Polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01]
Length = 307
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/302 (37%), Positives = 157/302 (51%), Gaps = 20/302 (6%)
Query: 38 TQFDLKTYWTTLITEIDQNLEKAITVKYPEQ--IYESMRYSVLAKGTKRAPPVMCVAACE 95
FDLK + T + +EK I +YPE+ + ++MR+S+ A G KR P++C+ + E
Sbjct: 11 NSFDLKAFLTEYGRLVVAAMEKRI-ARYPEESRVTQAMRHSLFAGG-KRLRPILCMTSAE 68
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
G N+ A ALE +H SLIHDDLP +DDD RRG P+ H + AILAGD L
Sbjct: 69 AVGGNKDHVMDVAAALEFIHTYSLIHDDLPALDDDDYRRGTPTCHKAFDEATAILAGDGL 128
Query: 156 FPLGFQHIVSHTPPH-LVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL-----VE 209
F+ I+SH L+P +VL +IA I+ A G GM GQ LD+EGE +E
Sbjct: 129 LTSAFE-ILSHAADDGLLPAEKVLTIIAGISHAAGCNGMILGQMLDIEGEHESLTREELE 187
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
+ K G M E S G +L G ++I +L Y + VG+ +QV+DDIL P+
Sbjct: 188 DIHNNKTGAMIEVSVFSGAYLGGGTPEQIAALDVYAKNVGLAFQVIDDILNVIGD-PKVM 246
Query: 270 EK----KKKKGKS-YVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAA 324
K + GKS Y A G++ A + AE L KA + + F D PL S Y
Sbjct: 247 GKAVGTDAELGKSTYPALMGLDGAQDFAERLINKALQAIVSFDNKCD---PLRSIATYIL 303
Query: 325 DR 326
R
Sbjct: 304 TR 305
>gi|423202732|ref|ZP_17189311.1| hypothetical protein HMPREF1167_02894 [Aeromonas veronii AER39]
gi|404614928|gb|EKB11907.1| hypothetical protein HMPREF1167_02894 [Aeromonas veronii AER39]
Length = 296
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/270 (37%), Positives = 140/270 (51%), Gaps = 17/270 (6%)
Query: 68 QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCM 127
++ ++M Y +L G KR P + A E+ GV A A+E +HA SL+HDDLP M
Sbjct: 31 RLRDAMSYGLLLGG-KRVRPFLVYAVGEMLGVKSELLDGPAAAVECIHAYSLLHDDLPAM 89
Query: 128 DDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARA 187
D+D RRGQP+ H + AILAGDAL L F + H P + RV R+++ +ARA
Sbjct: 90 DNDDLRRGQPTVHKAFDEGTAILAGDALQTLAFSILADHPMPDALMANRV-RMLSTLARA 148
Query: 188 VGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFL-AGADDDEIQSL 241
G GM GQ LDL+ E + E V K G + EC+ G A DD + +L
Sbjct: 149 SGYLGMCGGQALDLQAEGRQITLTELEQVHRHKTGALIECAVALGALCKADVDDATLAAL 208
Query: 242 RRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYVAFYGVEKAMEVAEELR 296
+ Y A+G+ +QV DDIL+ T P+ + +K +Y A G+E A E+A EL
Sbjct: 209 QTYAAAIGLAFQVQDDILDITGDTATLGKPQGSDLALEK-STYPALLGLENARELARELH 267
Query: 297 AKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
KA L Y ++L +F DY +R
Sbjct: 268 GKALTALQSL-PYNTDILE--AFADYIIER 294
>gi|253990912|ref|YP_003042268.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) FPP
synthase [Photorhabdus asymbiotica]
gi|253782362|emb|CAQ85526.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) FPP
synthase [Photorhabdus asymbiotica]
Length = 305
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 160/307 (52%), Gaps = 18/307 (5%)
Query: 33 SQLRSTQFD--LKTYWTTLITEIDQNLEKAITVKYPEQ-IYESMRYSVLAKGTKRAPPVM 89
S+ S QF+ LKTY + + L ++ +P + +M++ L G KR P +
Sbjct: 2 SEQNSIQFEQQLKTYQQRVNKVLISTLS---SLTFPNSPLVRAMQHGALLGG-KRLRPFL 57
Query: 90 CVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAI 149
A E+FG++ A A+E +HA SLIHDDLP MD+D RRGQP+ H +G AI
Sbjct: 58 VYAVGEMFGLSANNLDAPAAAVECIHAYSLIHDDLPAMDNDDLRRGQPTCHIKFGEAHAI 117
Query: 150 LAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVE 209
LAGDAL L F+ + P + R L ++AE+A A G GM GQ LDLE E ++
Sbjct: 118 LAGDALQALAFEILSKREMPDVTTANR-LEMLAELATASGIAGMCGGQSLDLEAEGKHID 176
Query: 210 F-----VQEKKFGEMSECSAVCGGFLAG-ADDDEIQSLRRYGRAVGVLYQVVDDILEAKA 263
+ K G + C+ G + AG + D + L +Y +A+G+ +QV DDIL+
Sbjct: 177 LQALEQIHRHKTGALIRCAVKMGAYGAGQSGHDVLPELDQYAQAIGLAFQVQDDILDVIG 236
Query: 264 QTP---RDEEKKKKKGKS-YVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSF 319
T + + ++ GKS Y A G+E+A + A EL +A + L++ ++ N L +
Sbjct: 237 STEMIGKRQGSDQQLGKSTYPALLGLEQAQQKAHELYQEALKALNKLEEKSYNTTTLRTL 296
Query: 320 IDYAADR 326
+ +R
Sbjct: 297 ASFIIER 303
>gi|220934012|ref|YP_002512911.1| farnesyl-diphosphate synthase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219995322|gb|ACL71924.1| farnesyl-diphosphate synthase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 299
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 158/292 (54%), Gaps = 14/292 (4%)
Query: 41 DLKTYWTTLITEIDQNLEKAITVK--YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
+++ + + L ++Q L++ I + +P +++E+MRYS L G KR PV+ A + G
Sbjct: 5 NMEQHISALRARLEQALDRWIPAETTHPARLHEAMRYSALG-GGKRVRPVLVYGAGQALG 63
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
V ACA+E++H SLIHDDLP MD+D RRG+P+ H + +AILAGDA+ L
Sbjct: 64 VAPERLDGPACAVELIHVYSLIHDDLPAMDNDDLRRGKPTCHKAFDEAMAILAGDAMQAL 123
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEK---- 214
FQ I+S P L R LR++ +ARA GS GMA GQ +DL ++ Q +
Sbjct: 124 AFQ-ILSMDPDMLDDPARRLRMMETLARAAGSRGMAGGQAIDLGSVGKQLDIAQLEDMHV 182
Query: 215 -KFGEMSECSAVCGGFLA-GADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP---RDE 269
K G + S + G A D +++L R+ + VG+ +Q+ DDIL+ + T + +
Sbjct: 183 HKTGALIRASVLLGALSAPEVDKAHLENLDRFAKCVGLAFQIRDDILDVEGDTATLGKTQ 242
Query: 270 EKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+ K +Y A G+E++ + A EL +A L+ F D + + +I
Sbjct: 243 GADQALNKPTYPALIGLEESRQAARELVDQALGALEGFGAEADLLRWIARYI 294
>gi|365891994|ref|ZP_09430344.1| putative Geranyltranstransferase (Farnesyl-diphosphate synthase)
(FPP synthase) [Bradyrhizobium sp. STM 3809]
gi|365332002|emb|CCE02875.1| putative Geranyltranstransferase (Farnesyl-diphosphate synthase)
(FPP synthase) [Bradyrhizobium sp. STM 3809]
Length = 306
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/285 (36%), Positives = 143/285 (50%), Gaps = 18/285 (6%)
Query: 49 LITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTA 108
L+ E+ + A + P+++ ESMRYS L G KR P + V + +FGV R A
Sbjct: 22 LLGELLSDAPLADEIARPKRLIESMRYSSLGGG-KRLRPFLVVESAAVFGVPRRGALLAG 80
Query: 109 CALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTP 168
ALE +H SLIHDDLP MD+ RRG+P+ H VY AILAGDAL + F I++
Sbjct: 81 AALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKVYDDATAILAGDALLTIAFD-IITRDE 139
Query: 169 PHLVPEPRV-LRVIAEIARAVGSTGMAAGQFLDLEGE-------PNLVEFVQEKKFGEMS 220
H P+ V L + +AR G GMA GQ LDL GE P V VQ+ K G +
Sbjct: 140 IH--PDAGVRLALTRALARCAGVGGMAGGQILDLAGEGRFGDRDPVDVARVQQMKTGALL 197
Query: 221 ECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL--EAKAQT---PRDEEKKKKK 275
+ G L A E Q+L YGRA+G +Q+ DD+L E A T P + + K
Sbjct: 198 RFGCIAGALLGQASAAEYQALDDYGRALGEAFQIADDLLDVEGDAATLGKPAGADAELGK 257
Query: 276 GKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
++V G+ A + +L A+ L F GD + F+
Sbjct: 258 -TTFVTQLGIAGAKQRVRDLLARGDAALSIFGAKGDVLRATAHFV 301
>gi|365174801|ref|ZP_09362240.1| hypothetical protein HMPREF1006_00185 [Synergistes sp. 3_1_syn1]
gi|363614213|gb|EHL65711.1| hypothetical protein HMPREF1006_00185 [Synergistes sp. 3_1_syn1]
Length = 301
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/269 (39%), Positives = 154/269 (57%), Gaps = 18/269 (6%)
Query: 64 KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDD 123
K P +++ESM YS+ A G KR P++C+AA E GV A P A +EM+H A+LIHDD
Sbjct: 34 KAPPKLFESMEYSLRAGG-KRLRPILCLAAAERCGVAAENALPMALGIEMLHTATLIHDD 92
Query: 124 LPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAE 183
LPCMDDD RRG+PSNH ++G +A+LAGDAL + ++ +P VLR +
Sbjct: 93 LPCMDDDDMRRGKPSNHALFGETLAVLAGDALLAQSLEFPMAQLKN--IPAQNVLRAMRI 150
Query: 184 IARAVGSTGMAAGQFLDL-----EGEPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEI 238
A A+G G+ GQ LD+ EG+P+ V V K G + E + + G L AD+ +
Sbjct: 151 FAGAIGPAGVCGGQVLDMFAEGTEGDPHYVRRVAALKTGALIEAAVLTGASLGCADEAVL 210
Query: 239 QSLRRYGRAVGVLYQVVDDIL------EAKAQTP-RDEEKKKKKGKSYVAFYGVEKAMEV 291
+ Y R +G +Q+VDDIL E +TP +DEE+ K ++V YGV+ A E+
Sbjct: 211 KRYGDYARHLGSAFQIVDDILDVTSTAEELGKTPGKDEEQGK---LTHVTVYGVKAAGEM 267
Query: 292 AEELRAKAKEELDRFKKYGDNVLPLYSFI 320
AE+ A AKE L + D ++ L ++
Sbjct: 268 AEKESAAAKEALAGLLEEDDFLMLLPDYL 296
>gi|150016579|ref|YP_001308833.1| polyprenyl synthetase [Clostridium beijerinckii NCIMB 8052]
gi|149903044|gb|ABR33877.1| Polyprenyl synthetase [Clostridium beijerinckii NCIMB 8052]
Length = 289
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 140/263 (53%), Gaps = 21/263 (7%)
Query: 47 TTLITEIDQNLEKAITVK--YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAA 104
L +I++ LE + K + IY+S YS L G KR P++ ++ +
Sbjct: 4 NNLKKDINEYLENYFSEKGSFNRIIYDSCSYS-LNIGGKRIRPILLSLTYYIYKEDYRKV 62
Query: 105 FPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIV 164
P A A+EM+H SLIHDDLPCMD+D RRG+P+NH + +IA+LAGDAL + ++
Sbjct: 63 IPMAAAMEMIHTYSLIHDDLPCMDNDDLRRGKPTNHIKFQENIAVLAGDALLN---EAMI 119
Query: 165 SHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEM 219
L E LR EIA A G+ GM GQ +D+ E + E++ KK G +
Sbjct: 120 IMMDYALKSENNALRAAHEIAVAAGAEGMIGGQVVDIISEGKKISQDELEYMHAKKTGAL 179
Query: 220 SECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP-------RDEEKK 272
+ V G LA A +D+++ LR YG +G+++Q+ DDIL+ + DEE
Sbjct: 180 IRAAIVSGAILAEAPEDDLRLLREYGEKLGLVFQIKDDILDVIGDSNVLGKNIHADEEHN 239
Query: 273 KKKGKSYVAFYGVEKAMEVAEEL 295
K ++++ +G++K E+ E L
Sbjct: 240 K---TNFISVFGLDKCKELCETL 259
>gi|393200428|ref|YP_006462270.1| geranylgeranyl pyrophosphate synthase [Solibacillus silvestris
StLB046]
gi|327439759|dbj|BAK16124.1| geranylgeranyl pyrophosphate synthase [Solibacillus silvestris
StLB046]
Length = 294
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/257 (36%), Positives = 136/257 (52%), Gaps = 19/257 (7%)
Query: 62 TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIH 121
++K P + ESM YS+ A G KR P+ VA CE++ + ++ A+EM+H SLIH
Sbjct: 26 SIKAPAHLKESMLYSLKAGG-KRIRPLFVVAVCEMYNQSLETSYTVGSAVEMIHTYSLIH 84
Query: 122 DDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVI 181
DDLP MDDD RRG+P+NH VYG +A LAGDAL L F I +L E R+ ++
Sbjct: 85 DDLPSMDDDELRRGKPTNHVVYGEALATLAGDALNTLAFGVIAR--LNNLSAEKRI-ELV 141
Query: 182 AEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCGGFLAGADDD 236
++ A G+ GM GQ LD++GE L +E V K G + S G LA A
Sbjct: 142 NLLSVAAGTEGMVGGQVLDMDGEKRLLNLKELETVHVNKTGALLRFSIEAGAVLANASIS 201
Query: 237 EIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAM 289
+ ++L Y +G+ +Q+ DDIL+ + + E+ K GK +Y A +E A
Sbjct: 202 DREALVEYAHHIGLAFQIQDDILDIEGTS---EQLGKTAGKDVASDKSTYPALLTLEGAK 258
Query: 290 EVAEELRAKAKEELDRF 306
+ +E A E L +
Sbjct: 259 QKLDEHYELAIEALQKI 275
>gi|395791810|ref|ZP_10471266.1| hypothetical protein MEC_01257 [Bartonella alsatica IBS 382]
gi|395408113|gb|EJF74733.1| hypothetical protein MEC_01257 [Bartonella alsatica IBS 382]
Length = 300
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 151/306 (49%), Gaps = 34/306 (11%)
Query: 46 WTTLITEIDQNLEKAITVKY-----------PEQIYESMRYSVLAKGTKRAPPVMCVAAC 94
+TTL+ N+EK + + PE + ++MRY VL G KR P + + +
Sbjct: 4 FTTLLATHGHNVEKRLATLFSDQVQNGEIARPEILLKAMRYGVL-NGGKRLRPFLVIQSG 62
Query: 95 ELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDA 154
LF + ACALE VH SLIHDDLP MD+D RRGQP+ H + AILAG+A
Sbjct: 63 ALFDIPAEHTLDVACALECVHCYSLIHDDLPAMDNDTLRRGQPTVHIAFDEATAILAGNA 122
Query: 155 LFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE------PNLV 208
L F+ I++H L E R+ ++I +A++ G GM GQ LDLE E N++
Sbjct: 123 LLTFAFE-IIAHKASELSFETRI-KLITALAQSAGLGGMIGGQMLDLEAEKKPQESTNII 180
Query: 209 EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP-- 266
+Q K + + G + A + + L +G G+ +Q+ DD+L+ A T
Sbjct: 181 T-LQRMKTAALISFACQAGAIIGNASKELTEKLAAFGTYFGLAFQLTDDLLDVTASTKVL 239
Query: 267 -----RDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFID 321
+DE K +++ YG+E+ + +EL AKA+ L F G PL
Sbjct: 240 GKTAGKDETMHK---ATFIRLYGIEETRKKRDELIAKAEALLTPF---GIKAKPLQQAAR 293
Query: 322 YAADRE 327
++A R+
Sbjct: 294 FSATRK 299
>gi|197301783|ref|ZP_03166853.1| hypothetical protein RUMLAC_00509 [Ruminococcus lactaris ATCC
29176]
gi|197299223|gb|EDY33753.1| polyprenyl synthetase [Ruminococcus lactaris ATCC 29176]
Length = 296
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 150/282 (53%), Gaps = 20/282 (7%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVK--YPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
+ K +T + +I++ L+K + K Y I E+M YS++A G KR P++ + LF
Sbjct: 1 MNFKEEYTDRVEKIEKILKKYLPEKKGYQRTIMEAMEYSLMA-GGKRLRPMLMWESYRLF 59
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G A P A+EM+H SL+HDDLP MD+D RRG+ + H VYG D+ ILAGDAL
Sbjct: 60 GGEGAAIEPFMAAIEMIHTYSLVHDDLPAMDNDEYRRGRKTTHIVYGEDMGILAGDALLN 119
Query: 158 LGFQ---HIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----E 209
F+ H + + L+++A+ A G GM GQ +D++ V +
Sbjct: 120 YAFETACRAFEEESEHALRIGKALKILADKA---GIYGMIGGQVVDVQESGKAVSGEVLD 176
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT---- 265
F+ K + E S + G LAGA++ ++ + + +G+ +Q+ DDIL+ + T
Sbjct: 177 FIYRLKTSALIEASMMAGAVLAGAEEGQVSRMEQIAGKIGLAFQIQDDILDVTSTTELLG 236
Query: 266 -PRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRF 306
P ++K +K +YV + G+EKA E E L +A + L +F
Sbjct: 237 KPVHSDEKNEK-TTYVTWKGIEKAHEDVERLTQEAVDLLRKF 277
>gi|302024292|ref|ZP_07249503.1| geranyltranstransferase [Streptococcus suis 05HAS68]
gi|330833278|ref|YP_004402103.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis ST3]
gi|329307501|gb|AEB81917.1| geranylgeranyl pyrophosphate synthase [Streptococcus suis ST3]
Length = 289
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 146/271 (53%), Gaps = 25/271 (9%)
Query: 55 QNLEKAITVKYPEQIYESMRYSVL---AKGTKRAPPVMCVAACELFGVN-RIAAFPTACA 110
Q LE+A+ Y Q+ E + SVL G KR P++ + E FG+ + A + A
Sbjct: 7 QRLEEAMADFYQPQVAERLNQSVLYSLQAGGKRIRPLLLLTILESFGMELKQAHYQVAAC 66
Query: 111 LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF--PLGFQHIVSHTP 168
+E++H SLIHDDLP MD+D RRG+ +NH VY AILAGD+LF P GF V
Sbjct: 67 VELIHTGSLIHDDLPAMDNDDYRRGRLTNHKVYDEATAILAGDSLFLDPFGFLAQVD--- 123
Query: 169 PHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE-PNL----VEFVQEKKFGEMSECS 223
+P +L ++ E+++A G+ GM AGQ LD+ GE NL ++ + K G++
Sbjct: 124 ---LPAETILALVRELSQASGTFGMVAGQVLDMAGEGQNLTLEQLQAIHANKTGKLLTFP 180
Query: 224 AVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL------EAKAQTPRDEEKKKKKGK 277
V G +AG D I LR+ G+ +G+ +QV DDIL E +TP+ + +K
Sbjct: 181 FVAAGLIAGQSDVVINHLRQAGQLIGLAFQVRDDILDVTTTFEEIGKTPQKDVLAEK--S 238
Query: 278 SYVAFYGVEKAMEVAEELRAKAKEELDRFKK 308
+Y A G+E + E+ +A ELD+ K
Sbjct: 239 TYPALMGLEASKVFLEDSLNQAINELDQVAK 269
>gi|456358608|dbj|BAM93053.1| putative geranyltranstransferase [Agromonas oligotrophica S58]
Length = 307
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/285 (36%), Positives = 143/285 (50%), Gaps = 18/285 (6%)
Query: 49 LITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTA 108
L+ E+ + A + P+++ ESMRYS L G KR P + V + +FGV R A
Sbjct: 23 LLGELLSDAPMADEIIRPKRLIESMRYSSLGGG-KRLRPFLVVESAAVFGVPRRGALMAG 81
Query: 109 CALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTP 168
ALE +H SLIHDDLP MD+ RRG+P+ H Y AILAGDAL + F I++
Sbjct: 82 AALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKAYDDATAILAGDALLTIAFD-IITRDE 140
Query: 169 PHLVPEPRV-LRVIAEIARAVGSTGMAAGQFLDLEGE-------PNLVEFVQEKKFGEMS 220
H P+ V L + +AR G GMA GQ LDL GE P V VQ+ K G +
Sbjct: 141 IH--PDAGVRLALTRALARCAGVGGMAGGQILDLAGEGRFGDRDPVDVARVQQMKTGALL 198
Query: 221 ECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL--EAKAQT---PRDEEKKKKK 275
+ G L A E Q+L YGRA+G +Q+ DD+L E A T P + + K
Sbjct: 199 RFGCIAGALLGQASPAEYQALDDYGRALGEAFQIADDLLDVEGDAATLGKPAGADAELGK 258
Query: 276 GKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
++V G+E A + +L A+ L F GD + F+
Sbjct: 259 -TTFVTQLGIEGAKQRVRDLLARGDAALSIFGAKGDVLRAAAHFV 302
>gi|317128429|ref|YP_004094711.1| polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522]
gi|315473377|gb|ADU29980.1| Polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522]
Length = 295
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 138/260 (53%), Gaps = 20/260 (7%)
Query: 42 LKTYWTTLITEIDQNLEKAI-TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVN 100
LK ++ +ID L I + P Q+ ++M YS+ A G KR P++ +A +
Sbjct: 6 LKHFFDEEKKQIDNRLPHIIENLNIPVQLRDAMIYSLKA-GGKRIRPMLLLATLRGYNKP 64
Query: 101 RIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGF 160
+ ACA+EM+H SLIHDDLP MD+D RRG+P+NH V+G +AILAGD L F
Sbjct: 65 LSHGYDVACAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYSF 124
Query: 161 QHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKK 215
Q I S L+P+ L +I ++++A G GM GQ LD++GE + ++ + K
Sbjct: 125 QLISSSM---LLPDNVKLLLIQKMSQAAGPEGMVGGQVLDMQGEGITLSVDQLQKIHHHK 181
Query: 216 FGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP-------RD 268
G++ S G LAG ++E SL + + +G+ +Q+ DDIL+ + D
Sbjct: 182 TGDLLAVSVESGAILAGVSENERISLTSFAKHLGIAFQIKDDILDVEGDESSIGKPIGSD 241
Query: 269 EEKKKKKGKSYVAFYGVEKA 288
EE K +Y G++ A
Sbjct: 242 EENDK---NTYPKLLGLDGA 258
>gi|217069938|gb|ACJ83329.1| unknown [Medicago truncatula]
Length = 214
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/140 (49%), Positives = 97/140 (69%), Gaps = 3/140 (2%)
Query: 28 PVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPP 87
P+ A Q + F+ K+Y T +++ L+ A++++ P +++E+MRYS+LA G KR P
Sbjct: 69 PIEAEEQ--NPIFNFKSYMIEKATRVNKALDDAVSLREPLKVHEAMRYSLLAGG-KRVRP 125
Query: 88 VMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDI 147
V+C+AACEL G A P ACA+EM+H SLIHDDLPCMD+D RRG+P+NH V+G D+
Sbjct: 126 VLCLAACELVGGTEPMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDV 185
Query: 148 AILAGDALFPLGFQHIVSHT 167
A+LAGDAL F+HI T
Sbjct: 186 AVLAGDALLAFAFEHIAVST 205
>gi|357380778|pdb|3UCA|A Chain A, Crystal Structure Of Isoprenoid Synthase (Target
Efi-501974) From Clostridium Perfringens
gi|357380779|pdb|3UCA|B Chain B, Crystal Structure Of Isoprenoid Synthase (Target
Efi-501974) From Clostridium Perfringens
Length = 324
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 146/278 (52%), Gaps = 26/278 (9%)
Query: 36 RSTQFDLKTYWTTLITEIDQNLEKAITV--KYPEQIYESMRYSVLAKGTKRAPPVMCVAA 93
R T D +L E+DQ+L+ +Y + +Y+SM YS+ G KR P++ + +
Sbjct: 27 RKTLEDTAMNINSLKEEVDQSLKAYFNKDREYNKVLYDSMAYSINV-GGKRIRPILMLLS 85
Query: 94 CELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGD 153
++ + A A+EM+H SLIHDDLPCMD+D RRG+P+NH V+G IA+LAGD
Sbjct: 86 YYIYKSDYKKILTPAMAIEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGD 145
Query: 154 ALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP------NL 207
AL + +V ++ L L+ IA A GS GM GQ +D+ E
Sbjct: 146 ALLNEAMKILVDYS---LEEGKSALKATKIIADAAGSDGMIGGQIVDIINEDKEEISLKE 202
Query: 208 VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP- 266
++++ KK GE+ + S + G LA A + +I+ L +G +G+ +Q+ DDIL+
Sbjct: 203 LDYMHLKKTGELIKASIMSGAVLAEASEGDIKKLEGFGYKLGLAFQIKDDILDVVGNAKD 262
Query: 267 ------RDEEKKKKKGKSYVAFYGVE----KAMEVAEE 294
+D+E K +Y+ +G+E K + + EE
Sbjct: 263 LGKNVHKDQESNK---NNYITIFGLEECKKKCVNITEE 297
>gi|392426568|ref|YP_006467562.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus
acidiphilus SJ4]
gi|391356531|gb|AFM42230.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus
acidiphilus SJ4]
Length = 291
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/249 (39%), Positives = 137/249 (55%), Gaps = 13/249 (5%)
Query: 69 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMD 128
+ ESM YS L G KR PV+ +AA E G N P A ALE++H SLIHDDLP MD
Sbjct: 30 LSESMSYS-LVGGGKRIRPVLALAAAEAVGGNPEKILPAAIALELIHTYSLIHDDLPAMD 88
Query: 129 DDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAV 188
+D RRG+ SNH V+G AILAGD L F+ + P L + LRVI E+A A
Sbjct: 89 NDDYRRGRLSNHKVFGEANAILAGDGLLTYAFEFLAD---PILGQPEKQLRVIREVAAAA 145
Query: 189 GSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRR 243
G GM GQ LD+ GE +E + + K G + SA GG LAG +++I++L
Sbjct: 146 GKNGMVGGQVLDIAGEEKKLSLTEIEEIHKAKTGALLIASARLGGILAGGSEEQIEALTN 205
Query: 244 YGRAVGVLYQVVDDILEAKAQTP---RDEEKKKKKGKS-YVAFYGVEKAMEVAEELRAKA 299
Y +A+G+ +Q+ DDIL+ + + ++GKS YV+ G+E+A +A
Sbjct: 206 YAQALGLAFQIKDDILDVIGDSETLGKPAGSDLRQGKSTYVSLLGLEEAKHQLHAQTQRA 265
Query: 300 KEELDRFKK 308
+ L F++
Sbjct: 266 QSALKLFER 274
>gi|330830903|ref|YP_004393855.1| Geranyltranstransferase [Aeromonas veronii B565]
gi|406675879|ref|ZP_11083065.1| hypothetical protein HMPREF1170_01273 [Aeromonas veronii AMC35]
gi|423208452|ref|ZP_17195006.1| hypothetical protein HMPREF1169_00524 [Aeromonas veronii AER397]
gi|328806039|gb|AEB51238.1| Geranyltranstransferase [Aeromonas veronii B565]
gi|404618297|gb|EKB15217.1| hypothetical protein HMPREF1169_00524 [Aeromonas veronii AER397]
gi|404626102|gb|EKB22912.1| hypothetical protein HMPREF1170_01273 [Aeromonas veronii AMC35]
Length = 296
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/270 (37%), Positives = 140/270 (51%), Gaps = 17/270 (6%)
Query: 68 QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCM 127
++ ++M Y +L G KR P + A E+ GV A A+E +HA SL+HDDLP M
Sbjct: 31 RLRDAMSYGLLLGG-KRVRPFLVYAVGEMLGVKSELLDGPAAAVECIHAYSLLHDDLPAM 89
Query: 128 DDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARA 187
D+D RRGQP+ H + AILAGDAL L F + H P + RV R+++ +ARA
Sbjct: 90 DNDDLRRGQPTVHKAFDEGTAILAGDALQTLAFSILADHPMPDSLMANRV-RMLSTLARA 148
Query: 188 VGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFL-AGADDDEIQSL 241
G GM GQ LDL+ E + E V K G + EC+ G A DD + +L
Sbjct: 149 SGYLGMCGGQALDLQAEGRQISLAELEQVHRHKTGALIECAVALGALCKADVDDATLAAL 208
Query: 242 RRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYVAFYGVEKAMEVAEELR 296
+ Y A+G+ +QV DDIL+ T P+ + +K +Y A G+E A E+A EL
Sbjct: 209 QTYAAAIGLAFQVQDDILDITGDTATLGKPQGSDLALEK-STYPALLGLENARELARELH 267
Query: 297 AKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
KA L Y ++L +F DY +R
Sbjct: 268 GKALTALQSL-PYNTDILE--AFADYIIER 294
>gi|347534345|ref|YP_004841015.1| geranyltranstransferase [Lactobacillus sanfranciscensis TMW 1.1304]
gi|345504401|gb|AEN99083.1| Geranyltranstransferase [Lactobacillus sanfranciscensis TMW 1.1304]
Length = 293
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 153/295 (51%), Gaps = 17/295 (5%)
Query: 35 LRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIY-ESMRYSVLAKGTKRAPPVMCVAA 93
++ Q L + T I +ID L K I E + SM+YS++A G KR P++ +A
Sbjct: 3 MKFNQKKLNRFQTEYIPKIDAVLSKEIKNSSNENLLVNSMQYSLMA-GGKRLRPLLVLAV 61
Query: 94 CELFGVNRIAAF-PTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAG 152
E +GV +CA+E++H SLIHDDLP MD+ RRG+ +NH +G DIA+LAG
Sbjct: 62 LESYGVKITDELIKISCAVELLHTYSLIHDDLPEMDNSDYRRGKLANHKKFGDDIAVLAG 121
Query: 153 DALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFV- 211
D L L F + ++ L+ R+ ++++ ++ A G GM GQ +D+ ++ V
Sbjct: 122 DGLLTLAFSWLSDNS---LLASQRI-KLVSLLSNAAGPKGMVEGQVIDVTSAEKTLDLVG 177
Query: 212 ----QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPR 267
KK GE+ + G LA D+ + QSL + G+ +Q+ DDIL+A P
Sbjct: 178 LQTLDRKKTGELFHYCILAGSVLAKVDEADQQSLSEFAWNFGIAFQIYDDILDA----PT 233
Query: 268 DEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
DE ++ +YV F G++ A E +EL++ + ++ L SF+ Y
Sbjct: 234 DETQEDIDKNTYVNFLGMQGAKTKLSETVENCIKELEKLEN-AQSIDLLKSFLSY 287
>gi|257095634|ref|YP_003169275.1| polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
gi|257048158|gb|ACV37346.1| Polyprenyl synthetase [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
Length = 307
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 145/267 (54%), Gaps = 18/267 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P +++++MRY+ L G KR P++ AA +L R A A+E++H+ SL+HDDLP
Sbjct: 42 PGRLHQAMRYASL-DGGKRVRPLLVFAAGDLTDAARERLELAASAVELIHSYSLVHDDLP 100
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GD+L L F+ + R L ++ +A
Sbjct: 101 CMDDDVLRRGRPTCHVEYDEATALLVGDSLQSLAFELLARE---DFGDGARQLEMVRLLA 157
Query: 186 RAVGSTGMAAGQFLDLE------GEPNLVEFVQEKKFGEMSECSAVCGGFLAGA--DDDE 237
RA GS GMA GQ +DLE +P L E + K G + + + G L G E
Sbjct: 158 RASGSCGMAGGQSIDLESVGKTLNQPEL-ELMHALKTGALIRAAVILGA-LCGTPLSTTE 215
Query: 238 IQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK----SYVAFYGVEKAMEVAE 293
++L R+ + G+L+QVVDDIL+ A T + K +YV+ G+E+A E+A
Sbjct: 216 REALDRFAKRAGLLFQVVDDILDCTASTATLGKTAGKDAATEKPTYVSLLGLERARELAA 275
Query: 294 ELRAKAKEELDRFKKYGDNVLPLYSFI 320
+LRA+A + L+ F + ++ L FI
Sbjct: 276 DLRAQALQALNLFGERSQRLVELTDFI 302
>gi|395779097|ref|ZP_10459601.1| hypothetical protein MCU_01302 [Bartonella elizabethae Re6043vi]
gi|423714603|ref|ZP_17688827.1| hypothetical protein MEE_00028 [Bartonella elizabethae F9251]
gi|395416425|gb|EJF82801.1| hypothetical protein MCU_01302 [Bartonella elizabethae Re6043vi]
gi|395431381|gb|EJF97400.1| hypothetical protein MEE_00028 [Bartonella elizabethae F9251]
Length = 300
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 154/305 (50%), Gaps = 32/305 (10%)
Query: 46 WTTLITEIDQNLEKAIT-----------VKYPEQIYESMRYSVLAKGTKRAPPVMCVAAC 94
+TTL+ + Q++E ++ + PE + ++MRY VL G KR P + + +
Sbjct: 4 FTTLLAKHGQSVESRLSTLLSDHIQTGEISRPENLIKAMRYGVL-NGGKRLRPFLVIQSA 62
Query: 95 ELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDA 154
LF + + ACALE VH SLIHDDLP MD+D RRG+P+ H + AILAG+A
Sbjct: 63 ALFDIPVEHSLDVACALECVHCYSLIHDDLPAMDNDILRRGKPTVHIEFDEATAILAGNA 122
Query: 155 LFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVE----- 209
L F+ I++H L E R+ ++I +A+A G GM GQ LD+E E E
Sbjct: 123 LLTFAFE-IIAHKANALSTEIRI-KLITALAQASGLGGMIGGQMLDIEAEKRSQESTDII 180
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP--- 266
+Q K + + G + A ++ + L +G +G+ +Q+ DD+L+ A T
Sbjct: 181 TLQRMKTASLISFACQAGAIIGNASEELLTKLTAFGTYLGLAFQLTDDLLDVTANTQTLG 240
Query: 267 ----RDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
+DE +K ++V YG+E+ + + L KA+ L F G LPL +
Sbjct: 241 KTAGKDETAQK---ATFVRLYGIEETQKKRDSLITKAEALLHPF---GIKALPLQQAARF 294
Query: 323 AADRE 327
+A R+
Sbjct: 295 SATRK 299
>gi|18310802|ref|NP_562736.1| geranyltranstransferase [Clostridium perfringens str. 13]
gi|18145483|dbj|BAB81526.1| geranyltranstransferase [Clostridium perfringens str. 13]
Length = 301
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 146/278 (52%), Gaps = 26/278 (9%)
Query: 36 RSTQFDLKTYWTTLITEIDQNLEKAITV--KYPEQIYESMRYSVLAKGTKRAPPVMCVAA 93
R T D +L E+DQ+L+ +Y + +Y+SM YS+ G KR P++ + +
Sbjct: 4 RKTLEDTAMNINSLKEEVDQSLKAYFNKDREYNKVLYDSMAYSINV-GGKRIRPILMLLS 62
Query: 94 CELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGD 153
++ + A A+EM+H SLIHDDLPCMD+D RRG+P+NH V+G IA+LAGD
Sbjct: 63 YYIYKSDYKKILTPAMAIEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGD 122
Query: 154 ALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP------NL 207
AL + +V ++ L L+ IA A GS GM GQ +D+ E
Sbjct: 123 ALLNEAMKILVDYS---LEEGKSALKATKIIADAAGSDGMIGGQIVDIINEDKEEISLKE 179
Query: 208 VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP- 266
++++ KK GE+ + S + G LA A + +I+ L +G +G+ +Q+ DDIL+
Sbjct: 180 LDYMHLKKTGELIKASIMSGAVLAEASEGDIKKLEGFGYKLGLAFQIKDDILDVVGNAKD 239
Query: 267 ------RDEEKKKKKGKSYVAFYGVE----KAMEVAEE 294
+D+E K +Y+ +G+E K + + EE
Sbjct: 240 LGKNVHKDQESNK---NNYITIFGLEECKKKCVNITEE 274
>gi|347521183|ref|YP_004778754.1| farnesyl diphosphate synthase [Lactococcus garvieae ATCC 49156]
gi|343179751|dbj|BAK58090.1| farnesyl diphosphate synthase [Lactococcus garvieae ATCC 49156]
Length = 283
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 148/274 (54%), Gaps = 22/274 (8%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVN- 100
+ TY L E+ + +KA P+ + +++ YS LA G KR P++ + E GV
Sbjct: 1 MMTYMNRLNQELIKFYKKA---DIPQHLADAVTYS-LAAGGKRIRPLLFLKMLESLGVTL 56
Query: 101 RIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGF 160
A + A +EM+HA SLIHDDLP MD+D RRGQ +NH + AILAGDALF +
Sbjct: 57 ETAHYQVAATVEMIHAGSLIHDDLPAMDNDDYRRGQLTNHKKFDEATAILAGDALFLDPY 116
Query: 161 QHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE-PNL----VEFVQEKK 215
+ + + +P V+ ++ E++ A GS GM AGQ LD+EGE NL V+ + K
Sbjct: 117 YLLATLS----LPAATVVSLVKELSFASGSLGMVAGQILDMEGEGKNLSLEQVKEIHHLK 172
Query: 216 FGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL------EAKAQTPRDE 269
G M V G +A ++ I LR G+ +G+ +Q+ DDI+ E +TP +
Sbjct: 173 TGRMLTFPFVAAGIIAEQSEEVIAKLREIGQNLGLAFQIRDDIIDVTGTFEEIGKTPGKD 232
Query: 270 EKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEEL 303
+ ++K +YVA G++ A E EEL K +L
Sbjct: 233 QAEEK--STYVALLGLKGAQEALEELLTAVKSDL 264
>gi|406665282|ref|ZP_11073056.1| Farnesyl diphosphate synthase [Bacillus isronensis B3W22]
gi|405387208|gb|EKB46633.1| Farnesyl diphosphate synthase [Bacillus isronensis B3W22]
Length = 294
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/257 (36%), Positives = 136/257 (52%), Gaps = 19/257 (7%)
Query: 62 TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIH 121
++K P + ESM YS+ A G KR P+ VA CE++ + ++ A+EM+H SLIH
Sbjct: 26 SIKAPAHLKESMLYSLKAGG-KRIRPLFVVAVCEMYNQSLETSYTVGSAVEMIHTYSLIH 84
Query: 122 DDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVI 181
DDLP MDDD RRG+P+NH VYG +A LAGDAL L F I +L E R+ ++
Sbjct: 85 DDLPSMDDDELRRGKPTNHVVYGEALATLAGDALNTLAFGVIAR--LNNLSAEKRI-ELV 141
Query: 182 AEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCGGFLAGADDD 236
++ A G+ GM GQ LD++GE L +E V K G + S G LA A
Sbjct: 142 NLLSVAAGAEGMVGGQVLDMDGEKRLLNLKELETVHVNKTGALLRFSIEAGAVLANASIS 201
Query: 237 EIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAM 289
+ ++L Y +G+ +Q+ DDIL+ + + E+ K GK +Y A +E A
Sbjct: 202 DREALVEYAHHIGLAFQIQDDILDIEGTS---EQLGKTAGKDVASDKSTYPALLTLEGAK 258
Query: 290 EVAEELRAKAKEELDRF 306
+ +E A E L +
Sbjct: 259 QKLDEHYELAIEALQKI 275
>gi|110802213|ref|YP_699103.1| geranyltranstransferase [Clostridium perfringens SM101]
gi|110682714|gb|ABG86084.1| geranyltranstransferase [Clostridium perfringens SM101]
Length = 290
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 145/267 (54%), Gaps = 26/267 (9%)
Query: 47 TTLITEIDQNLEKAITV--KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAA 104
+L E+DQ+L+ +Y + +Y+SM YSV G KR P++ + + ++ +
Sbjct: 4 NSLKEEVDQSLKAYFDKDREYNKVLYDSMAYSVNV-GGKRIRPILMLLSYYIYKSDYKKI 62
Query: 105 FPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIV 164
A A+EM+H SLIHDDLPCMD+D RRG+P+NH V+G IA+LAGDAL + +V
Sbjct: 63 LTPAIAIEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKILV 122
Query: 165 SHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP------NLVEFVQEKKFGE 218
++ + + ++IA+ A GS GM GQ +D+ E ++++ KK GE
Sbjct: 123 DYSLEEGISALKATKIIAD---AAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGE 179
Query: 219 MSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP-------RDEEK 271
+ + S + G LA A + +I+ L +G +G+ +Q+ DDIL+ +D+E
Sbjct: 180 LIKASIMSGAILAEASERDIKKLEDFGYKLGLAFQIKDDILDVVGNAKDLGKNVHKDQES 239
Query: 272 KKKKGKSYVAFYGVE----KAMEVAEE 294
K +Y+ +G+E K + + EE
Sbjct: 240 NK---NNYITIFGLEECKKKCVNITEE 263
>gi|223932932|ref|ZP_03624927.1| Polyprenyl synthetase [Streptococcus suis 89/1591]
gi|223898378|gb|EEF64744.1| Polyprenyl synthetase [Streptococcus suis 89/1591]
Length = 289
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 146/271 (53%), Gaps = 25/271 (9%)
Query: 55 QNLEKAITVKYPEQIYESMRYSVL---AKGTKRAPPVMCVAACELFGVN-RIAAFPTACA 110
Q LE+ + Y Q+ E + SVL G KR P++ + E FG+ + A + A
Sbjct: 7 QRLEETMADFYQPQVAERLNQSVLYSLQAGGKRIRPLLLLTILESFGMELKQAHYQVAAC 66
Query: 111 LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF--PLGFQHIVSHTP 168
+E++H SLIHDDLP MD+D RRG+ +NH VY AILAGD+LF P GF V
Sbjct: 67 VELIHTGSLIHDDLPAMDNDDYRRGRLTNHKVYDEATAILAGDSLFLDPFGFLAQVD--- 123
Query: 169 PHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE-PNL----VEFVQEKKFGEMSECS 223
+P +L ++ E+++A G+ GM AGQ LD+ GE NL ++ + K G++
Sbjct: 124 ---LPAETILALVRELSQASGTFGMVAGQVLDMAGEGQNLTLEQLQAIHANKTGKLLTFP 180
Query: 224 AVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA------QTPRDEEKKKKKGK 277
V G +AG D I LR+ G+ +G+ +QV DDIL+ A +TP+ + +K
Sbjct: 181 FVAAGLIAGQSDVVINHLRQAGQLIGLAFQVRDDILDVTATFEEIGKTPQKDVLAEK--S 238
Query: 278 SYVAFYGVEKAMEVAEELRAKAKEELDRFKK 308
+Y A G+E + E+ +A ELD+ K
Sbjct: 239 TYPALMGLEASKVFLEDSLNQAINELDQVAK 269
>gi|373856764|ref|ZP_09599508.1| Polyprenyl synthetase [Bacillus sp. 1NLA3E]
gi|372453743|gb|EHP27210.1| Polyprenyl synthetase [Bacillus sp. 1NLA3E]
Length = 297
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 134/238 (56%), Gaps = 16/238 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVN-RIAAFPTACALEMVHAASLIHDDL 124
P+ + ESM YS+ A G KR P++ A + FG++ R +P A A+EM+H SLIHDDL
Sbjct: 31 PDILKESMLYSLKA-GGKRIRPLLLFATLQAFGMDPRKGLYP-AVAIEMIHTYSLIHDDL 88
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MD+D RRG+P+NH V+G +AILAGD L FQ ++S P + +I+ +
Sbjct: 89 PSMDNDDLRRGKPTNHKVFGDAVAILAGDGLLTYSFQ-VLSEMPEQDSDVRTKVGLISLL 147
Query: 185 ARAVGSTGMAAGQFLDLEGEP---NL--VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A+A G+ GM GQ D+EGE NL +E++ K G++ C + G +A A ++
Sbjct: 148 AQAAGAEGMVGGQVADIEGEGKHLNLTELEYIHLHKTGKLLVCCVMSGALMANASKEQAS 207
Query: 240 SLRRYGRAVGVLYQVVDDILEAKAQ-------TPRDEEKKKKKGKSYVAFYGVEKAME 290
+L + + +G+ +Q+ DDIL+ + DEE K S + G +KAM+
Sbjct: 208 NLEAFAKHLGMAFQIRDDILDLEGNEELIGKPIGSDEENLKNTYPSLLTMDGAKKAMQ 265
>gi|94986851|ref|YP_594784.1| geranylgeranyl pyrophosphate synthase [Lawsonia intracellularis
PHE/MN1-00]
gi|442555683|ref|YP_007365508.1| geranylgeranyl pyrophosphate synthase [Lawsonia intracellularis
N343]
gi|94731100|emb|CAJ54462.1| Geranylgeranyl pyrophosphate synthase [Lawsonia intracellularis
PHE/MN1-00]
gi|441493130|gb|AGC49824.1| geranylgeranyl pyrophosphate synthase [Lawsonia intracellularis
N343]
Length = 300
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/261 (39%), Positives = 142/261 (54%), Gaps = 21/261 (8%)
Query: 69 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMD 128
+ +M YS+LA G KR V+C+++ LF ++ + P A +EM+H SLIHDDLP MD
Sbjct: 36 LQHAMNYSLLAGG-KRLRAVLCISSAALFDLSPTSILPFAAGIEMIHTYSLIHDDLPAMD 94
Query: 129 DDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAV 188
DD RRG+PS H + +AILAGDAL F + T +VP +L I EIA+A
Sbjct: 95 DDDFRRGKPSCHKAFNEALAILAGDALLTDAFTFM--STLNSIVPSNNILVAIHEIAQAA 152
Query: 189 GSTGMAAGQFLDLEGEP------NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLR 242
GS GM GQ +D+E N + + E K G + S G LAGA++ I +L+
Sbjct: 153 GSNGMVKGQSMDIEHTGVSDVSFNTLCIIHEYKTGALFRASCTTGAMLAGANESAIYALK 212
Query: 243 RYGRAVGVLYQVVDDILEAKAQ-------TPRDEEKKKKKGKSYVAFYGVEKAMEVAEEL 295
YG A+G +Q+ DDIL A T D+EK K +Y + G+EK+ ++AEE
Sbjct: 213 CYGEALGAAFQITDDILNVTADSITLGKPTRSDQEKGK---ITYPSLLGLEKSKKLAEEK 269
Query: 296 RAKAKEELDRFKKYGDNVLPL 316
A LD F GD VL L
Sbjct: 270 IHLAISSLDTFT--GDEVLFL 288
>gi|153853044|ref|ZP_01994453.1| hypothetical protein DORLON_00438 [Dorea longicatena DSM 13814]
gi|149753830|gb|EDM63761.1| polyprenyl synthetase [Dorea longicatena DSM 13814]
Length = 300
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 141/260 (54%), Gaps = 18/260 (6%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
Y + I E+M YS++A G KR P++ LFG A P ALEM+H SL+HDDL
Sbjct: 32 YQKVIMEAMEYSLMA-GGKRLRPMLMRETSRLFGDETEALCPFMAALEMIHTYSLVHDDL 90
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVS--HTPPHLVPEPRVLRVIA 182
P MD+D RRG+ + H VYG D+ ILAGDAL F+ T P ++ R ++
Sbjct: 91 PAMDNDEYRRGRKTTHIVYGEDMGILAGDALLNYAFETAFRAFETAPQ--ESLKIGRALS 148
Query: 183 EIARAVGSTGMAAGQFLDLEGE-----PNLVEFVQEKKFGEMSECSAVCGGFLAGADDDE 237
+ R G GM GQ +D++ ++++ + E K G + EC+ + G L GA++++
Sbjct: 149 VLGRKAGVYGMIGGQVIDVKETGHAVPKDVLDTIYELKTGALIECAMMIGAILGGAEEED 208
Query: 238 IQSLRRYGRAVGVLYQVVDDILEAKAQ-----TPRDEEKKKKKGKSYVAFYGVEKAMEVA 292
++ + + VG+ +Q+ DDIL+ + P ++K +K +YV G+E+A +
Sbjct: 209 VRKVEKIAHYVGIAFQIQDDILDVTSTEEVLGKPIHSDEKNQK-TTYVTLLGIEQAQKRV 267
Query: 293 EELRAKAKEELDRFKKYGDN 312
EEL +A + L + G+N
Sbjct: 268 EELSNQAIDLLHQLS--GEN 285
>gi|264679659|ref|YP_003279566.1| polyprenyl synthetase [Comamonas testosteroni CNB-2]
gi|262210172|gb|ACY34270.1| Polyprenyl synthetase [Comamonas testosteroni CNB-2]
Length = 324
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 140/276 (50%), Gaps = 13/276 (4%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
D + + + L + + + P + E+MRY+VL G KR P++ AA E G
Sbjct: 31 LDFSVWMQERLARTEDALSRWVGINAPAGLGEAMRYAVL-DGGKRLRPLLVWAAAEAVGG 89
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A CA+E++HA SL+HDD+PCMD+D RRG+P+ H +G A+LAGDAL L
Sbjct: 90 LAAATLRAGCAVELIHAYSLVHDDMPCMDNDTMRRGKPTVHVQFGEASALLAGDALQALA 149
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEM 219
F+ ++ +P ++ + A GS GMA GQ +DL + Q ++ +
Sbjct: 150 FELLLPEDDG--IPCSMQAKLCRLLGAAAGSQGMAGGQAIDLASVGKHLSEAQLREMHRL 207
Query: 220 SECSAVCGGFLAGA------DDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
+ + G L GA D + +L YG+A+GV +QVVDDIL+ A + +
Sbjct: 208 KTGALLLGSVLMGAACNAQTDARALAALTDYGQALGVAFQVVDDILDVVADSATLGKTAG 267
Query: 274 KKGK----SYVAFYGVEKAMEVAEELRAKAKEELDR 305
K ++V+ G+E A AE+LR +A L R
Sbjct: 268 KDAANDKPTFVSLLGLEAARAHAEQLRQQAHAALTR 303
>gi|222151415|ref|YP_002560571.1| farnesyl diphosphate synthase [Macrococcus caseolyticus JCSC5402]
gi|222120540|dbj|BAH17875.1| farnesyl diphosphate synthase [Macrococcus caseolyticus JCSC5402]
Length = 290
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 144/281 (51%), Gaps = 23/281 (8%)
Query: 55 QNLEKAITVKYPEQ---IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACAL 111
Q++E+ I+ Y + +++SM YS L+ G KR P+ + + G N + AL
Sbjct: 13 QDIEEVISGLYSAKDGRLFDSMHYS-LSAGGKRIRPLFVLTTIDSLGGNAVDGLSFGVAL 71
Query: 112 EMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHL 171
EM+H SLIHDDLP MD+D RRG+ +NH + AILAGDAL F+ I
Sbjct: 72 EMIHTYSLIHDDLPAMDNDDYRRGKLTNHKHFDEATAILAGDALLTDSFRMITEGKFDAD 131
Query: 172 VPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVC 226
+ P +I+ ++ A GS GM GQ LD+EGE N +E V K GE+ + V
Sbjct: 132 IKLP----LISLLSEAAGSKGMVYGQMLDMEGEHQALELNQMEQVHSYKTGELIRAAFVA 187
Query: 227 GGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQ-------TPRDEEKKKKKGKSY 279
G + D++IQ L + GR VG+++Q+ DDIL+ + D E K +Y
Sbjct: 188 AGIIMKLTDEKIQLLDQIGRNVGLMFQIQDDILDVEGSFEEIGKPVGSDVENDK---STY 244
Query: 280 VAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
V+ G+E++ + +E ++ + + D +L L FI
Sbjct: 245 VSLLGLEQSKALLKEKFDHTEKLVQALRPINDGLLQLIRFI 285
>gi|299533199|ref|ZP_07046583.1| Polyprenyl synthetase [Comamonas testosteroni S44]
gi|298718729|gb|EFI59702.1| Polyprenyl synthetase [Comamonas testosteroni S44]
Length = 313
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 140/276 (50%), Gaps = 13/276 (4%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
D + + + L + + + P + E+MRY+VL G KR P++ AA E G
Sbjct: 20 LDFSVWMQERLARTEDALSRWVGINAPAGLGEAMRYAVL-DGGKRLRPLLVWAAAEAVGG 78
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A CA+E++HA SL+HDD+PCMD+D RRG+P+ H +G A+LAGDAL L
Sbjct: 79 LAAATLRAGCAVELIHAYSLVHDDMPCMDNDTMRRGKPTVHVQFGEASALLAGDALQALA 138
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEM 219
F+ ++ +P ++ + A GS GMA GQ +DL + Q ++ +
Sbjct: 139 FELLLPEDDG--IPCSMQAKLCRLLGAAAGSQGMAGGQAIDLASVGKQLSEAQLREMHRL 196
Query: 220 SECSAVCGGFLAGA------DDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
+ + G L GA D + +L YG+A+GV +QVVDDIL+ A + +
Sbjct: 197 KTGALLLGSVLMGAACNAQTDARALAALTDYGQALGVAFQVVDDILDVVADSATLGKTAG 256
Query: 274 KKGK----SYVAFYGVEKAMEVAEELRAKAKEELDR 305
K ++V+ G+E A AE+LR +A L R
Sbjct: 257 KDAANDKPTFVSLLGLEAARAHAEQLRQQAHAALTR 292
>gi|389872690|ref|YP_006380109.1| geranyltranstransferase [Advenella kashmirensis WT001]
gi|388537939|gb|AFK63127.1| geranyltranstransferase [Advenella kashmirensis WT001]
Length = 304
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 156/300 (52%), Gaps = 34/300 (11%)
Query: 50 ITEIDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPT 107
I +I+ +L+KA+ + P +++++MRY+ L G KR + AA + + +A P+
Sbjct: 16 IEKIEGSLDKALPPADETPAKLHQAMRYAALGAG-KRLRAALVYAAGQ--ASAQQSALPS 72
Query: 108 A---------CALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
A A+E++HA SLIHDDLPCMDDD RRG+P+ H + A+LAGDAL PL
Sbjct: 73 ALEHTLSRAAVAVELIHAYSLIHDDLPCMDDDVLRRGKPTVHVQFDEATAMLAGDALQPL 132
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG-----EPNLVEFVQE 213
F + + V V++ + +A+A GS GM GQ +DL +P ++F+
Sbjct: 133 AFAQLAQMS----VAPALVVQAVNVLAQAAGSQGMVGGQAIDLASVNTRLDPEQLQFMHR 188
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA------QTPR 267
K G + E S G + A+ D +L YG A+G+ +QVVDDIL+ A +TP
Sbjct: 189 LKTGALIEASVQLGAIVTAANSDIRMALENYGSAIGLAFQVVDDILDVTADQQALGKTPG 248
Query: 268 DEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+ K +YV+ G+ ++ E A++L A LD K G+ L D R+
Sbjct: 249 KDAADNK--PTYVSVMGLAQSREFAQQLHEAA---LDAIKPLGEPACRLRELADLIIHRK 303
>gi|365882602|ref|ZP_09421807.1| putative Geranyltranstransferase (Farnesyl-diphosphate synthase)
(FPP synthase) [Bradyrhizobium sp. ORS 375]
gi|365289044|emb|CCD94338.1| putative Geranyltranstransferase (Farnesyl-diphosphate synthase)
(FPP synthase) [Bradyrhizobium sp. ORS 375]
Length = 306
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/285 (36%), Positives = 143/285 (50%), Gaps = 18/285 (6%)
Query: 49 LITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTA 108
L+ E+ + A + P+++ ESMRYS L G KR P + V + +FGV R A
Sbjct: 22 LLGELLGDAPLADEIARPKRLIESMRYSSLGGG-KRLRPFLVVESAAVFGVPRKGALLAG 80
Query: 109 CALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTP 168
ALE +H SLIHDDLP MD+ RRG+P+ H VY AILAGDAL + F I++
Sbjct: 81 AALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKVYDDATAILAGDALLTIAFD-IITRDE 139
Query: 169 PHLVPEPRV-LRVIAEIARAVGSTGMAAGQFLDLEGE-------PNLVEFVQEKKFGEMS 220
H P+ V L + +AR G GMA GQ LDL GE P V VQ+ K G +
Sbjct: 140 IH--PDAGVRLALTRALARCAGVGGMAGGQILDLAGEGRFGDRDPVDVARVQQMKTGALL 197
Query: 221 ECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL--EAKAQT---PRDEEKKKKK 275
+ G L A E Q+L YGRA+G +Q+ DD+L E A T P + + K
Sbjct: 198 RFGCIAGALLGQASPAEYQALDDYGRALGEAFQIADDLLDVEGDAATLGKPAGADAELGK 257
Query: 276 GKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
++V G+ A + +L A+ L F GD + F+
Sbjct: 258 -TTFVTQLGIAGAKQRVRDLLARGDAALSIFGAKGDVLRATAHFV 301
>gi|386350702|ref|YP_006048950.1| farnesyl-diphosphate synthase [Rhodospirillum rubrum F11]
gi|346719138|gb|AEO49153.1| farnesyl-diphosphate synthase [Rhodospirillum rubrum F11]
Length = 292
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 146/269 (54%), Gaps = 17/269 (6%)
Query: 66 PE-QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
PE ++ ++MRY+ L +G KR P + + + +LF V+R A A A+EM+H SLIHDDL
Sbjct: 22 PEGRVVDAMRYAAL-EGGKRLRPFLVLQSAQLFSVSRACALNVAAAIEMIHCYSLIHDDL 80
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MD+D RRG+P+ H Y AILAGDAL F+ +++ H P R ++ E+
Sbjct: 81 PAMDNDDLRRGRPTVHRQYDEPTAILAGDALLTKAFE-VIALPGTHSDPAVRC-DLVTEL 138
Query: 185 ARAVGSTGMAAGQFLDLEGEPNLVEF---------VQEKKFGEMSECSAVCGGFLAGADD 235
A A G+ GM GQ +DL E L++ + + K G + S++ G L A
Sbjct: 139 AIAAGAKGMVGGQMIDLMAERGLIDGALDVPAITRMHQLKTGRLISFSSIAGAILGKAPR 198
Query: 236 DEIQSLRRYGRAVGVLYQVVDDILEAKAQTP---RDEEKKKKKGKS-YVAFYGVEKAMEV 291
+ Q+L Y +G+ +Q+ DD+L+ + T + K + GKS +V+ G+E+A +
Sbjct: 199 SQRQALFNYAHDLGLAFQIADDLLDVEGDTATLGKTAGKDEASGKSTFVSLLGLERARDQ 258
Query: 292 AEELRAKAKEELDRFKKYGDNVLPLYSFI 320
A+ L +A LD F + D + + F+
Sbjct: 259 ADMLAEQAVNHLDAFDEKADLLRAVARFV 287
>gi|83593950|ref|YP_427702.1| farnesyl-diphosphate synthase [Rhodospirillum rubrum ATCC 11170]
gi|83576864|gb|ABC23415.1| farnesyl-diphosphate synthase [Rhodospirillum rubrum ATCC 11170]
Length = 305
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 146/269 (54%), Gaps = 17/269 (6%)
Query: 66 PE-QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
PE ++ ++MRY+ L +G KR P + + + +LF V+R A A A+EM+H SLIHDDL
Sbjct: 35 PEGRVVDAMRYAAL-EGGKRLRPFLVLQSAQLFSVSRACALNVAAAIEMIHCYSLIHDDL 93
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MD+D RRG+P+ H Y AILAGDAL F+ +++ H P R ++ E+
Sbjct: 94 PAMDNDDLRRGRPTVHRQYDEPTAILAGDALLTKAFE-VIALPGTHSDPAVRC-DLVTEL 151
Query: 185 ARAVGSTGMAAGQFLDLEGEPNLVEF---------VQEKKFGEMSECSAVCGGFLAGADD 235
A A G+ GM GQ +DL E L++ + + K G + S++ G L A
Sbjct: 152 AIAAGAKGMVGGQMIDLMAERGLIDGALDVPAITRMHQLKTGRLISFSSIAGAILGKAPR 211
Query: 236 DEIQSLRRYGRAVGVLYQVVDDILEAKAQTP---RDEEKKKKKGKS-YVAFYGVEKAMEV 291
+ Q+L Y +G+ +Q+ DD+L+ + T + K + GKS +V+ G+E+A +
Sbjct: 212 SQRQALFNYAHDLGLAFQIADDLLDVEGDTATLGKTAGKDEASGKSTFVSLLGLERARDQ 271
Query: 292 AEELRAKAKEELDRFKKYGDNVLPLYSFI 320
A+ L +A LD F + D + + F+
Sbjct: 272 ADMLAEQAVNHLDAFDEKADLLRAVARFV 300
>gi|110799631|ref|YP_696503.1| geranyltranstransferase [Clostridium perfringens ATCC 13124]
gi|168210817|ref|ZP_02636442.1| geranyltranstransferase [Clostridium perfringens B str. ATCC 3626]
gi|182625644|ref|ZP_02953413.1| geranyltranstransferase [Clostridium perfringens D str. JGS1721]
gi|422874739|ref|ZP_16921224.1| geranyltranstransferase [Clostridium perfringens F262]
gi|110674278|gb|ABG83265.1| geranyltranstransferase [Clostridium perfringens ATCC 13124]
gi|170711106|gb|EDT23288.1| geranyltranstransferase [Clostridium perfringens B str. ATCC 3626]
gi|177909046|gb|EDT71521.1| geranyltranstransferase [Clostridium perfringens D str. JGS1721]
gi|380304380|gb|EIA16669.1| geranyltranstransferase [Clostridium perfringens F262]
Length = 290
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 145/267 (54%), Gaps = 26/267 (9%)
Query: 47 TTLITEIDQNLEKAITV--KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAA 104
+L E+DQ+L+ +Y + +Y+SM YS+ G KR P++ + + ++ +
Sbjct: 4 NSLKEEVDQSLKAYFNKDREYNKVLYDSMAYSINV-GGKRIRPILMLLSYYIYKSDYKKI 62
Query: 105 FPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIV 164
A A+EM+H SLIHDDLPCMD+D RRG+P+NH V+G IA+LAGDAL + +V
Sbjct: 63 LTPAMAIEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKILV 122
Query: 165 SHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP------NLVEFVQEKKFGE 218
++ + + ++IA+ A GS GM GQ +D+ E ++++ KK GE
Sbjct: 123 DYSLEEGISALKATKIIAD---AAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGE 179
Query: 219 MSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP-------RDEEK 271
+ + S + G LA A + +I+ L +G +G+ +Q+ DDIL+ +D+E
Sbjct: 180 LIKASIMSGAVLAEASEGDIKKLEDFGYKLGLAFQIKDDILDVVGNAKDLGKNVHKDQES 239
Query: 272 KKKKGKSYVAFYGVE----KAMEVAEE 294
K +Y+ +G+E K + + EE
Sbjct: 240 NK---NNYITIFGLEECKKKCVNITEE 263
>gi|386714769|ref|YP_006181092.1| geranyltranstransferase [Halobacillus halophilus DSM 2266]
gi|384074325|emb|CCG45818.1| geranyltranstransferase [Halobacillus halophilus DSM 2266]
Length = 294
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 141/274 (51%), Gaps = 22/274 (8%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P ++ ++M YS+ A G KR P++ +A E FG AC LEM+H SLIHDDLP
Sbjct: 30 PGRLQDAMLYSIEA-GGKRLRPILLIATAEAFGAKVDKTMAVACGLEMIHTYSLIHDDLP 88
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
MD+D RRG P++H + AILAGDAL L + IV+ L RV +I E++
Sbjct: 89 AMDNDDFRRGLPTSHRRFDEATAILAGDALLTLSSEIIVN--DQELNDRERVF-LIQELS 145
Query: 186 RAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
RA G++GM GQ D+ E + E + +KK G++ + + G FL A D++
Sbjct: 146 RASGASGMVEGQMQDMLSEDKQIPLEELENIHKKKTGKLLNFAIIAGAFLGNASDEKFDE 205
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPR-------DEEKKKKKGKSYVAFYGVEKAMEVAE 293
+++ G A+G+++Q+ DDIL+ + DE +K +Y G++ A E
Sbjct: 206 MKKMGEALGLIFQIQDDILDVTGDAEKIGKPVGSDEGNRK---STYPQLLGLDGARTQME 262
Query: 294 ELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+A+ L K G N L I Y + R+
Sbjct: 263 SYVDEAQSAL---KNAGVNHTLLSELIHYLSSRD 293
>gi|323140954|ref|ZP_08075866.1| geranyltranstransferase [Phascolarctobacterium succinatutens YIT
12067]
gi|322414557|gb|EFY05364.1| geranyltranstransferase [Phascolarctobacterium succinatutens YIT
12067]
Length = 291
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 159/299 (53%), Gaps = 20/299 (6%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
D K Y+ ++ L+ I K ++ E+M YS++A G KR P++ +AA E G
Sbjct: 1 MDFKAYYANQQKLVENYLKNRIAKKGISKVDEAMEYSLMA-GGKRIRPILLMAAAEAVGS 59
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
P AC LEM+H SLIHDDLPCMDDD RRG+ +NH V+G +A+LAGD L L
Sbjct: 60 KGYNYLPVACGLEMIHTYSLIHDDLPCMDDDDYRRGRLTNHKVFGEAMAVLAGDGLLTLA 119
Query: 160 FQHIVSHTPPHLVPEPRVL-RVIAEIARAVGSTGMAAGQFLDLEGE-----PNLVEFVQE 213
F+ ++ +P+VL + E+A G+ GM GQ LDLE E P + +
Sbjct: 120 FEVMLEQKN----VDPKVLIETVREMAMCAGNFGMVGGQGLDLEFEGKKITPEELRKLHA 175
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQ-----TPRD 268
K G + + G LAGA+D ++ +L ++ +G+ +Q+ DDIL+ + P
Sbjct: 176 GKTGALFIAAIRGGAHLAGANDQQLLALTKFADLLGLAFQITDDILDVEGTEEELGKPVG 235
Query: 269 EEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+ K K +YV YG++ A E+AE+ A+A E L+ F G+N PL DR+
Sbjct: 236 SDAKNHK-STYVTLYGLQAAHELAEKTVAEALECLEMF---GENAEPLREITRLMTDRK 290
>gi|341821174|emb|CCC57514.1| geranyltranstransferase [Weissella thailandensis fsh4-2]
Length = 290
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 150/289 (51%), Gaps = 19/289 (6%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYP-EQIYESMRYSVLAKGTKRAPPVMCVAACELFGVN 100
LK + +I +I++ LE +T + E+M Y+VLA G KR P++ +A +G
Sbjct: 3 LKEFSKIVIPKIERTLETELTNDVSLSTLREAMLYAVLAGG-KRLRPMLSLAVLHTYGQP 61
Query: 101 RIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGF 160
A ALE+VH SLIHDDLP MDDD RRG+P+ H +G D+AILAGDAL PL F
Sbjct: 62 VDNYLKAASALELVHTYSLIHDDLPAMDDDELRRGKPTTHRAFGEDMAILAGDALQPLAF 121
Query: 161 QHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL------VEFVQEK 214
+ + + P + + + ++++A +A+ G GM AGQ LD+E + +
Sbjct: 122 EWLTAADQP--LNDSQRVQLVATLAKDSGGAGMVAGQVLDIEAMQKAAVTLSETQAIHYH 179
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKK 274
K G + + G +A AD + + LR +G A G+ +Q+ DDI D + K
Sbjct: 180 KTGALIAYALQAGAIMANADKEVQKILRDFGMAYGLAFQIKDDI--------DDYQAGKV 231
Query: 275 KGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKK-YGDNVLPLYSFIDY 322
+ ++Y G+ + + + A L +F+K G + L SF+DY
Sbjct: 232 ESQAYPTILGLPQTVLALKTQVNNANTALSQFEKATGLDTTLLASFLDY 280
>gi|416245524|ref|ZP_11634507.1| geranyltranstransferase [Moraxella catarrhalis BC8]
gi|326572218|gb|EGE22213.1| geranyltranstransferase [Moraxella catarrhalis BC8]
Length = 328
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 152/289 (52%), Gaps = 35/289 (12%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELF---------GVNRIAAFPTAC----ALE 112
PE + + RY+ ++ G KR P++ ++ + N C A+E
Sbjct: 49 PEPLNAACRYA-MSNGGKRVRPLLALSTFLMLIQTGDHKNHKNNLTKKLQMVCRAMMAVE 107
Query: 113 MVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSH---TPP 169
++H+ SLIHDDLPCMDDD RRGQP+ H VYG DIA+LAGDAL + F+ + + P
Sbjct: 108 LIHSYSLIHDDLPCMDDDALRRGQPTCHIVYGEDIALLAGDALQSIAFEVLSEYYEEAPA 167
Query: 170 HLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSA 224
R+ ++++ AR M +GQ LD++GE + +E + K G + E S
Sbjct: 168 DEAVAYRLTQILSTRARR-----MVSGQMLDIKGENQVLTQDELEAIHRDKTGALIEASV 222
Query: 225 VCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSY 279
+ G AGA + L+RY RA+G+ +QV DD+L+ T P ++K +K +Y
Sbjct: 223 MMGAVCAGAQTAALGHLKRYARAIGLAFQVQDDVLDITTDTITLGKPAGSDEKLEKS-TY 281
Query: 280 VAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
V GV+ A + A +L +A+ ++ + K +G+N L L D+ R+F
Sbjct: 282 VKLLGVDGAQDYANQLFEEARAQV-KVKHWGNNNL-LLQITDWLQKRKF 328
>gi|357051954|ref|ZP_09113072.1| hypothetical protein HMPREF9467_00044 [Clostridium clostridioforme
2_1_49FAA]
gi|355387222|gb|EHG34248.1| hypothetical protein HMPREF9467_00044 [Clostridium clostridioforme
2_1_49FAA]
Length = 303
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 141/269 (52%), Gaps = 21/269 (7%)
Query: 57 LEKAITVKYPEQ------IYESMRYSVLAKGTKRAPPVMCVAACELF-GVNRIAAFPTAC 109
+E+ I PE+ I+E+M YS+ A G KR P++ C LF G A P
Sbjct: 18 IEQLIGTYLPEETGHQKTIFEAMNYSMKAGG-KRLRPMLMQEMCRLFTGTLLEAVIPFMA 76
Query: 110 ALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPP 169
A+EM+H +SL+HDDLPCMDDD RRG+ S YG DI +L GDAL F+ +
Sbjct: 77 AVEMIHTSSLVHDDLPCMDDDMMRRGKASTWAEYGEDIGVLTGDALMMFAFETAANAFET 136
Query: 170 HLVPE--PRVLRVIAEIARAVGSTGMAAGQFLDLE--GEP---NLVEFVQEKKFGEMSEC 222
+ P+ R+ R + +A G GM GQ +D+E G P + ++ + K G + E
Sbjct: 137 SIAPDELSRIGRAMGILAHKTGVYGMIGGQTVDVELAGGPIPGDKLDIIYRLKTGALIEA 196
Query: 223 SAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGK 277
S + G L GA +++ + + +G+ +Q+ DDIL+ P ++K KK
Sbjct: 197 SMLIGAVLGGAAEEDCKIVESLASKIGMAFQIQDDILDVTGSQDVTGKPSGSDEKNKK-T 255
Query: 278 SYVAFYGVEKAMEVAEELRAKAKEELDRF 306
+YV G+EKA + E++ +A EEL++
Sbjct: 256 TYVTLEGLEKAKKDVEQISTEAIEELNKL 284
>gi|347542402|ref|YP_004857039.1| geranyltranstransferase [Candidatus Arthromitus sp. SFB-rat-Yit]
gi|346985438|dbj|BAK81113.1| geranyltranstransferase [Candidatus Arthromitus sp. SFB-rat-Yit]
Length = 289
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 137/269 (50%), Gaps = 16/269 (5%)
Query: 69 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMD 128
+YESM YS L+ G KR P++ + LF N P AC +EM+H SLIHDDLP MD
Sbjct: 28 VYESMSYS-LSIGGKRIRPILFLYTYLLFKENYKDVIPFACYIEMIHTYSLIHDDLPSMD 86
Query: 129 DDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAV 188
+D RRG +NH + +A+L+GD L F++++ + H + L +A+++
Sbjct: 87 NDMLRRGNLTNHVKFSEAVALLSGDGLLTEAFKNMIEFSIKH---GMKALYATFVVAKSI 143
Query: 189 GSTGMAAGQFLDL-----EGEPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRR 243
GM GQ +D+ E ++++ + K G + + S + +L A D+E++ L
Sbjct: 144 DCDGMIGGQVVDIITKNRELNEYTLKYINKNKTGALIKASVLSAAYLGDASDEEVKKLSE 203
Query: 244 YGRAVGVLYQVVDDILEAKAQT----PRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKA 299
Y +G+ +Q++DDIL+ T + K +YV YG++ ++ E+ KA
Sbjct: 204 YAHYIGLTFQIIDDILDKIGDTQTLGKTSNSDIRNKKFTYVDLYGIDLCKKICEDNTNKA 263
Query: 300 KEELDRFKKYGDNVLPLYSFIDYAADREF 328
L+ + +V L F Y +R+F
Sbjct: 264 INILNSLNR---DVSNLIDFTKYMLNRKF 289
>gi|422346488|ref|ZP_16427402.1| hypothetical protein HMPREF9476_01475 [Clostridium perfringens
WAL-14572]
gi|373226033|gb|EHP48360.1| hypothetical protein HMPREF9476_01475 [Clostridium perfringens
WAL-14572]
Length = 290
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 145/268 (54%), Gaps = 28/268 (10%)
Query: 47 TTLITEIDQNLEKAITV--KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAA 104
+L E+DQ+L+ +Y + +Y+SM YS+ G KR P++ + A ++ +
Sbjct: 4 NSLKEEVDQSLKAYFNKDREYNKVLYDSMAYSINV-GGKRIRPILMLLAYYIYKSDYKKI 62
Query: 105 FPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIV 164
A A+EM+H SLIHDDLPCMD+D RRG+P+NH V+G IA+LAGDAL + +V
Sbjct: 63 LTPAMAIEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKILV 122
Query: 165 SHTPPHLVPEPR-VLRVIAEIARAVGSTGMAAGQFLDLEGEP------NLVEFVQEKKFG 217
++ + E R L+ IA A GS GM GQ +D+ E ++++ KK G
Sbjct: 123 DYS----LEEGRSALKATKIIADAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTG 178
Query: 218 EMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP-------RDEE 270
E+ + S + G LA A + +I+ L +G +G+ +Q+ DDIL+ +D+E
Sbjct: 179 ELIKASIMSGAVLAEASEGDIKKLEDFGYKLGLAFQIKDDILDVVGNAKDLGKNVHKDQE 238
Query: 271 KKKKKGKSYVAFYGVE----KAMEVAEE 294
K +Y+ +G+E K + + EE
Sbjct: 239 SNK---NNYITIFGLEECKKKCVNITEE 263
>gi|15895350|ref|NP_348699.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
ATCC 824]
gi|337737298|ref|YP_004636745.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
DSM 1731]
gi|384458806|ref|YP_005671226.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
EA 2018]
gi|15025068|gb|AAK80039.1|AE007710_9 Predicted geranylgeranyl pyrophosphate synthase [Clostridium
acetobutylicum ATCC 824]
gi|325509495|gb|ADZ21131.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
EA 2018]
gi|336291039|gb|AEI32173.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
DSM 1731]
Length = 289
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 130/243 (53%), Gaps = 19/243 (7%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
Y +++YESM YS+ A G KR P++ +A+ ++ + A A+EM+H SLIHDDL
Sbjct: 24 YNKRVYESMNYSLNA-GGKRVRPLLLLASYAIYNKDYKEVIDIAAAIEMIHTYSLIHDDL 82
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
PCMD+D RRG+P+NH ++G IA+LAGD L + + + L+ I
Sbjct: 83 PCMDNDDLRRGRPTNHKIFGYSIALLAGDGLLNEAMNIMFKYC---IGKGEEALKACLMI 139
Query: 185 ARAVGSTGMAAGQFLDLEGEPNLVE-----FVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
++A S GM GQ +D+ E + ++ +KK GE+ + + V G L GA +++
Sbjct: 140 SKAASSDGMIGGQVVDILSEGKKINEDELRYMHKKKTGELIKAAVVSGAILGGAPLHDVE 199
Query: 240 SLRRYGRAVGVLYQVVDDILEAKAQT-------PRDEEKKKKKGKSYVAFYGVEKAMEVA 292
L +YG +G+ +Q+ DDIL+ T D E K +YV YG++K +
Sbjct: 200 LLSQYGDKLGLAFQIEDDILDIIGDTKIMGKTSKSDLENDK---CTYVTLYGIDKCKSIC 256
Query: 293 EEL 295
EL
Sbjct: 257 REL 259
>gi|291519198|emb|CBK74419.1| Geranylgeranyl pyrophosphate synthase [Butyrivibrio fibrisolvens
16/4]
Length = 305
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 142/266 (53%), Gaps = 15/266 (5%)
Query: 69 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMD 128
I+++M+YSV A G KR P++ LFG P A+E++H SL+HDDLP MD
Sbjct: 40 IFDAMQYSVTAGG-KRLRPILMNETFTLFGGEGDVIEPFMAAIELIHTYSLVHDDLPAMD 98
Query: 129 DDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAV 188
+D RRG+P+ H VYG + +LAGDAL F+ ++ + RV + +AR
Sbjct: 99 NDSLRRGKPTTHAVYGEAMGVLAGDALLNYAFETALNAYDAD-IDTVRVTEAMRILARKA 157
Query: 189 GSTGMAAGQFLDLEGEPNLVEFVQEK-------KFGEMSECSAVCGGFLAGADDDEIQSL 241
G GM GQ +D+E E +E +EK K G + E + + G LAGA + ++ ++
Sbjct: 158 GVFGMIGGQVVDVESEKKQLEMTKEKIDFIYELKTGALIEAAMMIGAVLAGATEQQVTTV 217
Query: 242 RRYGRAVGVLYQVVDDIL-----EAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEELR 296
+ +G+ +Q+ DDIL EA P +++ +K ++V F G+EK+ E + L
Sbjct: 218 ENVAKKIGLAFQIQDDILDVIGDEATIGKPIGSDERNEKC-TFVTFAGIEKSKEEVKRLT 276
Query: 297 AKAKEELDRFKKYGDNVLPLYSFIDY 322
+A EEL+ + + L +++ Y
Sbjct: 277 DEAIEELNSLPYKNEFLNELLNYLVY 302
>gi|121604406|ref|YP_981735.1| polyprenyl synthetase [Polaromonas naphthalenivorans CJ2]
gi|120593375|gb|ABM36814.1| farnesyl-diphosphate synthase [Polaromonas naphthalenivorans CJ2]
Length = 327
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 101/303 (33%), Positives = 155/303 (51%), Gaps = 22/303 (7%)
Query: 40 FDLKTYWTTLITEIDQNLEKAIT----VKYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
FDL+ + + I++ L + P + ++MRY+VL G KR P++ +AAC
Sbjct: 31 FDLRAWSAGQLAAIERALSCWVASPDEAPAPAGLCDAMRYAVL-DGGKRLRPLLVMAACA 89
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
+ A ACA+E++HA SL+HDD+PCMD+D RRG+P+ H YG A+LAGDAL
Sbjct: 90 AVNGDAATALRPACAIELIHAYSLVHDDMPCMDNDVLRRGKPTVHVQYGEAQALLAGDAL 149
Query: 156 FPLGFQHIVSHTP-PHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLE--GEPNLVEFVQ 212
L F+ + TP V P R+ +A+A G GMA GQ +DL G P +
Sbjct: 150 QALAFELL---TPGDDSVDAPTQARLCRLLAQAAGYQGMAGGQAIDLASVGLPLTSAQLH 206
Query: 213 EK---KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
E K G + + S + G A + +LR YG A+G+ +QVVDDIL+ A
Sbjct: 207 EMHRLKTGALLQASVMMGAACGAASPTALAALRDYGAAIGLAFQVVDDILDVTADAATLG 266
Query: 270 EKKKKKGK----SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYG-DNVLPLYSFIDYAA 324
+ K ++V+ G++ + A++L A+A L + G +N L + D
Sbjct: 267 KTAGKDAAQDKPTFVSLMGLQASRAYAQQLHAQA---LASLRASGLENTQALQALADMLV 323
Query: 325 DRE 327
+R+
Sbjct: 324 NRQ 326
>gi|238926867|ref|ZP_04658627.1| Farnesyltranstransferase [Selenomonas flueggei ATCC 43531]
gi|238885399|gb|EEQ49037.1| Farnesyltranstransferase [Selenomonas flueggei ATCC 43531]
Length = 291
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/266 (35%), Positives = 139/266 (52%), Gaps = 15/266 (5%)
Query: 67 EQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPC 126
+ + ++M YS++A G KR PV+ +AA + G + ACALEM+H SLIHDDLP
Sbjct: 28 DTLRQAMAYSLMAGG-KRLRPVLLMAAADAVGADGAKFLSVACALEMIHTYSLIHDDLPA 86
Query: 127 MDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIAR 186
MD+D RRG+ +NH V+G IAILAGD L L F I+ V +LRV+ EI+R
Sbjct: 87 MDNDDYRRGKLTNHKVFGDGIAILAGDGLLTLAFTVILRQQN---VSADTLLRVVDEISR 143
Query: 187 AVGSTGMAAGQFLDLEGEPNLVEF-----VQEKKFGEMSECSAVCGGFLAGADDDEIQSL 241
A G+ GM GQ LDL E + + V K G + + G L GA + ++ +L
Sbjct: 144 AAGAEGMVGGQVLDLRAEEHRISMEEMRRVHMGKTGALFRAALRSGAILGGASEAQLAAL 203
Query: 242 RRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYVAFYGVEKAMEVAEELR 296
Y G+ +Q+ DDIL+ P ++K K +YV+ +++A E+A +
Sbjct: 204 TTYAEQFGLAFQITDDILDVIGTAENIGKPVGSDEKNHK-STYVSLTSLDEAQELAAQTV 262
Query: 297 AKAKEELDRFKKYGDNVLPLYSFIDY 322
A L F D + L S++ Y
Sbjct: 263 KDACTALRDFGVEADFLRELVSYLVY 288
>gi|374639379|gb|AEZ55678.1| geranyl diphosphate synthase small subunit type I [Salvia
miltiorrhiza]
Length = 314
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 126/230 (54%), Gaps = 13/230 (5%)
Query: 44 TYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIA 103
+YW + +ID L+K+I ++ PE ++E M + A + A +CVAACEL G R
Sbjct: 49 SYWAAIEADIDTYLKKSIAIRSPETVFEPMHHLTFA-APRTAASAICVAACELVGGERSQ 107
Query: 104 AFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHI 163
A TA A+ ++HAA+ H+ LP + D P +P+ YG +I +L GD + GF+ +
Sbjct: 108 AIATASAIHIMHAAAYAHEHLP-LTDRPRPNSKPAIQHKYGPNIELLTGDGMASFGFELL 166
Query: 164 V-SHTPPHLVPEPRVLRVIAEIARAVGSTGMAAG-----QFLDLEGEPNLVEFVQEKKFG 217
S H PE R+LRVI EI+RA GS G+ G + +D + +E++ KK+G
Sbjct: 167 AGSIRSDHPNPE-RILRVIIEISRASGSEGIIDGFYREKEIVDQHSRFDFIEYLCRKKYG 225
Query: 218 EMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPR 267
EM C+A G LAG ++EIQ LR +G G L +L K TP+
Sbjct: 226 EMHACAAASGAILAGGAEEEIQKLRNFGHYAGTLI----GLLHKKIDTPQ 271
>gi|323484856|ref|ZP_08090212.1| hypothetical protein HMPREF9474_01963 [Clostridium symbiosum
WAL-14163]
gi|323401852|gb|EGA94194.1| hypothetical protein HMPREF9474_01963 [Clostridium symbiosum
WAL-14163]
Length = 294
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 132/245 (53%), Gaps = 13/245 (5%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
+ + I+E+M YSV A G KR P++ LFG I P A+EM+H +SLIHDDL
Sbjct: 27 HQKTIFEAMNYSVKAGG-KRLRPLLMREVYRLFGGTGIEIEPFMAAIEMIHTSSLIHDDL 85
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
PCMD+D RRG+ + VYG D+A+LAGDAL + + RV + I +
Sbjct: 86 PCMDNDEYRRGKKTTWVVYGYDMAVLAGDALLIYAIE-TAARAFQMTDNAQRVGKCIGIL 144
Query: 185 ARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A+ G GM GQ +D+E L+ +F+ K G + E + V G +AGA D+E +
Sbjct: 145 AQKTGIYGMIGGQTVDVELTDKLIPKDKLDFIYRLKTGALLEAAMVIGAVMAGASDEECE 204
Query: 240 SLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYVAFYGVEKAMEVAEE 294
++ R A+G+ +Q+ DDIL+ + P ++K K +YV+ G+EKA E+
Sbjct: 205 TVERMAAAIGLAFQIQDDILDVTSSQEVLGKPVLSDEKNNK-TTYVSLEGIEKAKRDVEK 263
Query: 295 LRAKA 299
L A
Sbjct: 264 LSETA 268
>gi|291279338|ref|YP_003496173.1| geranyl diphosphate synthase / farnesyl diphosphate synthase
[Deferribacter desulfuricans SSM1]
gi|290754040|dbj|BAI80417.1| geranyl diphosphate synthase / farnesyl diphosphate synthase
[Deferribacter desulfuricans SSM1]
Length = 300
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 155/302 (51%), Gaps = 15/302 (4%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVKYPEQI--YESMRYSVLAKGTKRAPPVMCVAAC 94
S F+LK Y +D + +T + + I ESMRYS+ A G KR PV+ ++
Sbjct: 2 SENFNLKNYIKFFAQRVDDWIRNYLTYENEQTIGLIESMRYSIFA-GGKRLRPVLIYSSY 60
Query: 95 ELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDA 154
+F P A A+EM+H SLIHDDLP MDDD RRG+P+NH ++G AILAGDA
Sbjct: 61 GIFESYFDKVTPFAAAVEMLHTYSLIHDDLPAMDDDDLRRGKPTNHKMFGEATAILAGDA 120
Query: 155 LFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL-----EGEPNLVE 209
L L F+ ++ +P +L ++A++ G GM GQ+ D+ E + N ++
Sbjct: 121 LLTLAFEIMLDKDINKDIPTETILEAAFKLAKSAGYKGMVGGQYADIINENKEIDKNTLD 180
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
F+ + K + G L AD+ + Q+L +G +G+ +Q+VDDIL+ + T
Sbjct: 181 FIHKHKTAALISYCCELGAILGFADEKDKQNLAEFGEKIGLAFQIVDDILDITSTTEELG 240
Query: 270 EKK----KKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAAD 325
+ K K +Y YG+EK+ +AE+L A ++ K YG PL +Y
Sbjct: 241 KNAGSDLKNKKATYPEIYGLEKSKSIAEDLINSA---INILKPYGKAATPLIEIANYILK 297
Query: 326 RE 327
R
Sbjct: 298 RN 299
>gi|429124140|ref|ZP_19184672.1| geranylgeranyl pyrophosphate synthase [Brachyspira hampsonii 30446]
gi|426279870|gb|EKV56889.1| geranylgeranyl pyrophosphate synthase [Brachyspira hampsonii 30446]
Length = 294
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 156/280 (55%), Gaps = 18/280 (6%)
Query: 40 FDLKTYWTTLITEIDQNLEKAI---TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
+LK Y + EI++ ++ ++ E ++Y + A G KR P++ ACEL
Sbjct: 1 MNLKEYMNARLEEINKTIDNVFEKSNIELENSFIEMLKYPLDA-GGKRLRPILTCLACEL 59
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
F + + A +LE++H SL+HDDLP MD+D RRG+P+ H YG AIL GD L
Sbjct: 60 FEGDYKKSIIPAVSLELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGLL 119
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL---EGEPN--LVEFV 211
FQ ++S T V + + +++ E++ A G GM GQF+DL E E N +++ +
Sbjct: 120 TYAFQ-LLSKTD---VKDSTLRKLLFELSYAAGVNGMVMGQFIDLYYEEKEINFDMLKVL 175
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP---RD 268
KK G M AV G ++ +D++I+++ +Y AVG+ +Q+ DDIL+ + +
Sbjct: 176 HAKKTGAMIR-GAVRLGAISSENDNDIENITKYAEAVGLAFQIQDDILDVISDNETLGKT 234
Query: 269 EEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFK 307
K +K+GK +YV +G+E A + A+++ KA E L +K
Sbjct: 235 VGKDEKEGKLTYVKQFGLEGAKKEAKKVTEKAIEYLKPYK 274
>gi|418019309|ref|ZP_12658817.1| Geranylgeranyl pyrophosphate synthase [Candidatus Regiella
insecticola R5.15]
gi|347605326|gb|EGY29784.1| Geranylgeranyl pyrophosphate synthase [Candidatus Regiella
insecticola R5.15]
Length = 313
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 147/282 (52%), Gaps = 20/282 (7%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVK--YPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
D T ID+ L+ I + Q+ E++RY+VL G KR P + A ++F
Sbjct: 8 IDFHQQLTLYQRRIDEKLKNFIQPLPFHSRQLIEAIRYTVLC-GGKRIRPYLVYATGKMF 66
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G++ + A A+E +HA SL+HDDLP MDDD RRGQPS H +G IAILAGDAL
Sbjct: 67 GLSPSSLDVAAAAVECIHAYSLVHDDLPAMDDDNLRRGQPSCHIKFGEAIAILAGDALQT 126
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQ 212
L F + P + E R L++++E+A+A+G+ GM AGQ LDL E + E +
Sbjct: 127 LAFSLLADQPMPDVTLENR-LKMVSELAKAIGAGGMCAGQALDLAAEHCQISLASLEKIH 185
Query: 213 EKKFGEMSECSAVCGGFLAGADDDEIQS-LRRYGRAVGVLYQVVDDILEAKAQTPR---- 267
K G + + G AG ++ S L Y A+G+ +QV DDIL+ +T R
Sbjct: 186 RHKTGALIRTAVRIGALAAGERSEKTLSLLDDYADAIGLAFQVQDDILDITGETARMGKQ 245
Query: 268 ---DEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRF 306
D+++ K +Y + G+E A A++ A+ LD
Sbjct: 246 QGADQQRNK---STYSSLLGLEGAKIKAKKFCQDAQIALDSL 284
>gi|225620225|ref|YP_002721482.1| geranylgeranyl pyrophosphate synthase [Brachyspira hyodysenteriae
WA1]
gi|225215044|gb|ACN83778.1| geranylgeranyl pyrophosphate synthase [Brachyspira hyodysenteriae
WA1]
Length = 296
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 156/282 (55%), Gaps = 18/282 (6%)
Query: 40 FDLKTYWTTLITEIDQNLEKAIT---VKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
+LK Y + EI++ ++ ++ E ++Y + A G KR P++ ACEL
Sbjct: 1 MNLKEYMNIRLEEINKTIDNVFDKSDIELENSFIEMLKYPLDA-GGKRLRPILTCLACEL 59
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
F + + A ALE++H SL+HDDLP MD+D RRG+P+ H YG AIL GD L
Sbjct: 60 FNGDYKKSIIPAVALELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGLL 119
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL---EGEPN--LVEFV 211
FQ ++S T V + + +++ E++ A G GM GQF+DL E E N +++ +
Sbjct: 120 THAFQ-LLSKTD---VKDSTLRKLLFELSYAAGINGMVMGQFIDLYYEEKEINFDMLKIL 175
Query: 212 QEKKFGEMSECSAVCGGFLA-GADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP---R 267
KK G M + G + +D++I+++ +YG A+G+ +Q+ DDIL+ + +
Sbjct: 176 HAKKTGAMIRGAIRLGAISSENINDNDIENITKYGEAIGLAFQIQDDILDVISDNETLGK 235
Query: 268 DEEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKK 308
K +K+GK +YV +G+E A E A+++ K+ E L +K+
Sbjct: 236 TVGKDEKEGKLTYVKQFGLEGAKEEAKKVIEKSIEYLKPYKE 277
>gi|423558242|ref|ZP_17534544.1| hypothetical protein II3_03446 [Bacillus cereus MC67]
gi|401191510|gb|EJQ98532.1| hypothetical protein II3_03446 [Bacillus cereus MC67]
Length = 297
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 101/283 (35%), Positives = 159/283 (56%), Gaps = 18/283 (6%)
Query: 51 TEIDQNL-EKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTAC 109
T +++NL A ++ P + E+M YS L G KR P++ A + FG R AC
Sbjct: 15 TFVEENLVSYANELQCPNVLREAMAYS-LEAGGKRLRPLLLFATLQAFGKERNLGVGAAC 73
Query: 110 ALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPP 169
ALEM+H SLIHDDLPCMDDD RRGQP+NH V+G +A+LAGD L FQ I+++
Sbjct: 74 ALEMIHTYSLIHDDLPCMDDDDLRRGQPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQK 133
Query: 170 HLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSA 224
+ E +V R++ E+A+A G GM AGQ D+E E N +E++ + K G++ E +
Sbjct: 134 EISAEKKV-RLVLELAKAAGPEGMVAGQVADMEAEGKRLTINELEYIHKHKTGKLLEFAV 192
Query: 225 VCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------K 277
+ G L+ A +++ + L + + +G+ +Q+ DDIL+ + +EE K G
Sbjct: 193 LAGAILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVEGT---EEEIGKPIGSDASNEKS 249
Query: 278 SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+Y + V++A + EE AKAK+ + + + +L + I
Sbjct: 250 TYTTLFTVDRAKSILEEKIAKAKDSISSLQLQDEYLLSICDLI 292
>gi|418531677|ref|ZP_13097588.1| polyprenyl synthetase [Comamonas testosteroni ATCC 11996]
gi|371451179|gb|EHN64220.1| polyprenyl synthetase [Comamonas testosteroni ATCC 11996]
Length = 309
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 140/276 (50%), Gaps = 13/276 (4%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
D + + + L + + + P + E+MRY+VL G KR P++ AA E G
Sbjct: 16 LDFSVWMQERLARTEDALSRWVGINAPAGLGEAMRYAVL-DGGKRLRPLLVWAAAEAVGG 74
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A CA+E++HA SL+HDD+PCMD+D RRG+P+ H +G A+LAGDAL L
Sbjct: 75 LAAATLRAGCAVELIHAYSLVHDDMPCMDNDTMRRGKPTVHVQFGEASALLAGDALQALA 134
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEM 219
F+ ++ +P ++ + A GS GMA GQ +DL + Q ++ +
Sbjct: 135 FELLLPEDDG--IPCSMQAKLCRLLGAAAGSQGMAGGQAIDLASVGKQLSEAQLREMHRL 192
Query: 220 SECSAVCGGFLAGA------DDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
+ + G L GA D + +L YG+A+GV +QVVDDIL+ A + +
Sbjct: 193 KTGALLLGSVLMGAACNAQTDVRALAALTVYGQALGVAFQVVDDILDVVADSATLGKTAG 252
Query: 274 KKGK----SYVAFYGVEKAMEVAEELRAKAKEELDR 305
K ++V+ G+E A AE+LR +A L R
Sbjct: 253 KDAANDKPTFVSLLGLEAARAHAEQLRQQAHAALTR 288
>gi|384261858|ref|YP_005417044.1| Farnesyl-diphosphate synthase [Rhodospirillum photometricum DSM
122]
gi|378402958|emb|CCG08074.1| Farnesyl-diphosphate synthase [Rhodospirillum photometricum DSM
122]
Length = 319
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 142/267 (53%), Gaps = 16/267 (5%)
Query: 67 EQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPC 126
+++ +MRY+ L G KR P + + + +LF V R A A A+EMVH SL+HDDLP
Sbjct: 51 DRVVAAMRYASL-DGGKRLRPFLVLQSAQLFTVGRSCALNVAAAIEMVHCYSLVHDDLPA 109
Query: 127 MDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIAR 186
MD+D RRG+P+ H Y AILAGDAL F+ +++ T H P+ R ++ E+A
Sbjct: 110 MDNDDLRRGRPTTHRAYDEATAILAGDALLTKAFE-VLALTGTHADPQVRA-DLVLELAL 167
Query: 187 AVGSTGMAAGQFLDLEGEPNLVEFVQE---------KKFGEMSECSAVCGGFLAGADDDE 237
A G+ GM GQ +DL E L+ VQ+ K G + S V G L A
Sbjct: 168 ASGARGMVGGQMIDLMAERGLLNGVQDVAAITRMHTMKTGRLISFSCVAGAILGKAPRPL 227
Query: 238 IQSLRRYGRAVGVLYQVVDDILEAKAQTP---RDEEKKKKKGKS-YVAFYGVEKAMEVAE 293
Q+L Y +G+ +Q+ DD+L+ + T + K + GKS +V+ G+++A + A+
Sbjct: 228 RQALAAYAHDLGLAFQIADDLLDVEGDTQTLGKTAGKDQAAGKSTFVSLLGLDRARDQAQ 287
Query: 294 ELRAKAKEELDRFKKYGDNVLPLYSFI 320
L +A LD F + D + + F+
Sbjct: 288 ALARQAVGHLDVFDEKADLLRDVARFV 314
>gi|389571717|ref|ZP_10161806.1| geranyltranstransferase [Bacillus sp. M 2-6]
gi|388428611|gb|EIL86407.1| geranyltranstransferase [Bacillus sp. M 2-6]
Length = 296
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 100/249 (40%), Positives = 137/249 (55%), Gaps = 19/249 (7%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
PE++ SM YS+ A G KR PV+ +A +G P CA+EM+H SLIHDDLP
Sbjct: 30 PEELKSSMLYSLKAGG-KRLRPVLVLALLNAYGKREEDGIPVGCAVEMIHTYSLIHDDLP 88
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH VYG A+LAGDAL F+ I S VP + LR+I E+
Sbjct: 89 CMDDDDLRRGKPTNHKVYGEATAVLAGDALLTESFRLITSQLSDD-VPADQKLRIIDELV 147
Query: 186 RAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+ G+ GM GQF D+E E + E + +K G++ S V G LAGA DDEI+
Sbjct: 148 TSAGALGMVGGQFDDMEAEQKQIPLSELESIHARKTGKLLTFSVVAGAILAGAPDDEIEK 207
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKK--------GKSYVAFYGVEKAMEVA 292
LR + +G+ +Q+ DDIL+ + EEK K+ +Y + + A E
Sbjct: 208 LREFSYHIGIAFQIRDDILDLEGS----EEKIGKRIGSDTANEKSTYPSLLTLSGAKEKL 263
Query: 293 EELRAKAKE 301
+E +AKE
Sbjct: 264 DEHITRAKE 272
>gi|169831187|ref|YP_001717169.1| polyprenyl synthetase [Candidatus Desulforudis audaxviator MP104C]
gi|169638031|gb|ACA59537.1| Polyprenyl synthetase [Candidatus Desulforudis audaxviator MP104C]
Length = 295
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 134/256 (52%), Gaps = 12/256 (4%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNR 101
L T+ +D+ L +A + P I+E+MRYSV A G KR P + +AA + G
Sbjct: 6 LAAKAETIDAALDRYLRQA--SENPPVIHEAMRYSVFAGG-KRLRPALTLAAAQAVGAPE 62
Query: 102 IAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQ 161
P ACA+E++H SLIHDDLP MD+D RRG+P+NH V+G +A+LAG ALF L F+
Sbjct: 63 RLVLPAACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHRVFGEAVALLAGSALFALAFE 122
Query: 162 HIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKF 216
+ + R+L V+ E+A A G+ G+ GQ LD+ V E V K
Sbjct: 123 VLAGCRRDGGLAAERILAVVEEVAAACGTAGLIGGQALDVVSVSRTVSEAELEAVHRAKT 182
Query: 217 GEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA---QTPRD-EEKK 272
G + + G L GA +++ L + G+ +Q+ DDIL+ QT +
Sbjct: 183 GALFRAAVRAGAVLGGASPVQLERLTVFAEHFGLAFQITDDILDVTGYAEQTGKAVGSDA 242
Query: 273 KKKGKSYVAFYGVEKA 288
+ + +YV+ G+E A
Sbjct: 243 RNRKHTYVSVCGLEAA 258
>gi|385832565|ref|YP_005870340.1| farnesyl diphosphate synthase [Lactococcus garvieae Lg2]
gi|343181718|dbj|BAK60056.1| farnesyl diphosphate synthase [Lactococcus garvieae Lg2]
Length = 283
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 148/274 (54%), Gaps = 22/274 (8%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVN- 100
+ TY L E+ + +KA P+ + +++ YS LA G KR P++ + E GV
Sbjct: 1 MMTYMNRLNQELIKFYKKA---DIPQHLADAVTYS-LAAGGKRIRPLLFLKMLESLGVTL 56
Query: 101 RIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGF 160
A + A +EM+HA SLIHDDLP MD+D RRGQ +NH + AILAGDALF +
Sbjct: 57 ETAHYQVAATVEMIHACSLIHDDLPAMDNDDYRRGQLTNHKKFDEATAILAGDALFLDPY 116
Query: 161 QHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE-PNL----VEFVQEKK 215
+ + + +P V+ ++ E++ A GS GM AGQ LD+EGE NL V+ + K
Sbjct: 117 YLLATLS----LPAATVVSLVKELSFASGSLGMVAGQILDMEGEGKNLSLEQVKEIHHLK 172
Query: 216 FGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL------EAKAQTPRDE 269
G M V G +A ++ I LR G+ +G+ +Q+ DDI+ E +TP +
Sbjct: 173 TGRMLTFPFVAAGIIAEQSEEVIAKLREIGQNLGLAFQIRDDIIDVTGTFEEIGKTPGKD 232
Query: 270 EKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEEL 303
+ ++K +YVA G++ A E EEL K +L
Sbjct: 233 QAEEK--STYVALLGLKGAQEALEELLTAVKSDL 264
>gi|167628424|ref|YP_001678923.1| geranylgeranyl pyrophosphate synthase [Heliobacterium modesticaldum
Ice1]
gi|167591164|gb|ABZ82912.1| geranylgeranyl pyrophosphate synthase [Heliobacterium modesticaldum
Ice1]
Length = 296
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 152/293 (51%), Gaps = 14/293 (4%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVK--YPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
DLK L +ID L + + + P I+++MRYS+ A G KR PV+ +A C
Sbjct: 1 MDLKAELKQLNMKIDAALSRYMPAEDVAPPVIHKAMRYSLFA-GGKRLRPVLVLAGCRAV 59
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G + + ACALEM+H SLIHDDLP MDDD RRG P+NH V+G AILAGD L
Sbjct: 60 GGDEESVMAAACALEMIHTYSLIHDDLPAMDDDDLRRGMPTNHVVFGEATAILAGDGLLT 119
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVE-----FVQ 212
F + VL+VIAE+A A GS GM GQ +D+E E ++ ++
Sbjct: 120 RAFGVLAEEGLRCGRSPALVLQVIAELADAAGSMGMIGGQVMDMESENKQIDVATMAYIH 179
Query: 213 EKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILE-----AKAQTPR 267
K G + S G L G +++++L RYG +G+ +Q+ DD+L+ K P
Sbjct: 180 AHKTGALIRASLRIGALLGGGSVEQVEALSRYGDHLGLAFQITDDLLDIQGDPEKIGKPV 239
Query: 268 DEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+ K K +Y A G+EKA + AE + A + L F + + + L ++
Sbjct: 240 GSDVKNNKA-TYPALLGLEKARQEAERVVQAALDSLAGFDEKAELLRELAQYL 291
>gi|157692927|ref|YP_001487389.1| geranyltranstransferase [Bacillus pumilus SAFR-032]
gi|157681685|gb|ABV62829.1| geranyltranstransferase [Bacillus pumilus SAFR-032]
Length = 296
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 138/244 (56%), Gaps = 14/244 (5%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P+ + SM YS+ A G KR PV+ +A +G N P CA+EM+H SLIHDDLP
Sbjct: 30 PKDLKSSMLYSLKAGG-KRLRPVLVLALLNAYGKNEEDGIPVGCAVEMIHTYSLIHDDLP 88
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH VYG A+LAGDAL F+ I S + + + LR++ E+
Sbjct: 89 CMDDDDLRRGKPTNHKVYGEATAVLAGDALLTESFRLITSQLSSSVSADKK-LRIVDELV 147
Query: 186 RAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
++ G+ GM GQF D+E E V E++ +K G++ S G LAGA DD+I+
Sbjct: 148 KSAGALGMVGGQFDDMEAEQKQVSLAELEYIHARKTGKLLTFSVAAGAMLAGASDDDIEK 207
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAK 300
LR + +G+ +Q+ DDIL+ E ++K GK + EK+ + + AK
Sbjct: 208 LREFSYHIGIAFQIRDDILDL-------EGSEEKIGKRVGSDTANEKSTYPSLLTLSGAK 260
Query: 301 EELD 304
E+LD
Sbjct: 261 EKLD 264
>gi|347735967|ref|ZP_08868722.1| Geranyltranstransferase [Azospirillum amazonense Y2]
gi|346920671|gb|EGY01682.1| Geranyltranstransferase [Azospirillum amazonense Y2]
Length = 299
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 151/295 (51%), Gaps = 20/295 (6%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPE------QIYESMRYSVLAKGTKRAPPVMCVAACE 95
L T + + + +E AI + P ++YE+MRY L G KR P + + +
Sbjct: 4 LPKTLTAAMADTVEQVETAIDILLPRSSMAEAKLYEAMRYGCLGGG-KRLRPFLVMESAR 62
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
LFGV+ A A A+E VH SLIHDDLP MDD RRG+P+ H + AILAGDAL
Sbjct: 63 LFGVSPACALRVAAAVEFVHCYSLIHDDLPAMDDASLRRGRPTVHRQFDEATAILAGDAL 122
Query: 156 FPLGFQHIVSHTPPHLVPEPRV-LRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF---- 210
F+ + T P +PRV +++ +A+A G GM GQ LDL E ++
Sbjct: 123 LTAAFEVM---TDPETHEDPRVRCALVSALAKASGPRGMVGGQMLDLIAETQALDIGAIT 179
Query: 211 -VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILE---AKAQTP 266
+Q K GE+ +A G L A + +L+ Y +G+ +Q+ DD+L+ +A+T
Sbjct: 180 RLQRMKTGELIAFAATAGAILGRASPPQFHALQAYAHDLGLAFQIADDLLDVEGTEAETG 239
Query: 267 RDEEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+ + K GK ++V+ G+E+A + A L +A L+ F+ + + F+
Sbjct: 240 KSVGRDKPAGKATFVSILGLERARDQAGRLADQATRHLEIFEGRASMLQAVARFV 294
>gi|357127831|ref|XP_003565581.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Brachypodium distachyon]
Length = 383
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 124/295 (42%), Positives = 165/295 (55%), Gaps = 31/295 (10%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITV-----KYPEQIY--ESMRYSVLAKGTKRAPPVM 89
S+ FD + Y T + + L++A+ + P+ + ESMRYSVL+ G KR PV+
Sbjct: 71 SSGFDFEQYLTAHAKSVHEALDRALALPARLEHEPDHHWLIESMRYSVLS-GGKRVRPVL 129
Query: 90 CVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAI 149
+AACE G + AA P ACA+EMVHA SL+HD++PCMDDD RRG+PS H +G A+
Sbjct: 130 AIAACEFVGGDAAAAAPVACAVEMVHAMSLVHDEMPCMDDDALRRGRPSCHAAFGEHAAL 189
Query: 150 LAGDALFPLGFQHIVSHTPPH--LVPEPRVLRVIAEIARAVGSTGMAAGQFLD--LEGEP 205
LAGDAL L F+H+ +VP R LR +AEIA A G G+AAGQ D EG
Sbjct: 190 LAGDALLALAFEHLALGYADAGIVVPAERALRSVAEIANAAGIGGVAAGQLADKACEGRG 249
Query: 206 NLV--------EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDD 257
+ V E V K + E +AV G + G E++ +RRY R VG+L+QVVDD
Sbjct: 250 SRVGVVSLATLEHVHVHKTARLLEAAAVSGAIVGGGTGAEVERVRRYARRVGLLFQVVDD 309
Query: 258 ILEAKAQTPRDEEKKKKKGKSYVA--------FYGVEKAMEVAEELRAKAKEELD 304
+L+ T E K GK VA GV+KA A+EL A A+ EL+
Sbjct: 310 VLDV---TRTSVELGKTAGKDLVADKSTYPKLLGGVDKARAYADELLAMAEAELE 361
>gi|169343610|ref|ZP_02864609.1| geranyltranstransferase [Clostridium perfringens C str. JGS1495]
gi|169298170|gb|EDS80260.1| geranyltranstransferase [Clostridium perfringens C str. JGS1495]
Length = 290
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 144/267 (53%), Gaps = 26/267 (9%)
Query: 47 TTLITEIDQNLEKAITV--KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAA 104
+L E+DQ+L+ +Y + +Y+SM YS+ G KR P++ + + ++ +
Sbjct: 4 NSLKEEVDQSLKAYFNKDREYNKVLYDSMAYSINV-GGKRIRPILMLLSYYIYKSDYKKI 62
Query: 105 FPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIV 164
A A+EM+H SLIHDDLPCMD+D RRG+P+NH V+G IA+LAGDAL + +V
Sbjct: 63 LTPAMAIEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKVLV 122
Query: 165 SHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP------NLVEFVQEKKFGE 218
++ + ++IA+ A GS GM GQ +D+ E ++++ KK GE
Sbjct: 123 DYSLEEGTSALKATKIIAD---AAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGE 179
Query: 219 MSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP-------RDEEK 271
+ + S + G LA A + +I+ L +G +G+ +Q+ DDIL+ +D+E
Sbjct: 180 LIKASIMSGAVLAEASEGDIKKLEDFGYKLGLAFQIKDDILDVVGNAKDLGKNVHKDQES 239
Query: 272 KKKKGKSYVAFYGVE----KAMEVAEE 294
K +Y+ +G+E K + + EE
Sbjct: 240 NK---NNYITIFGLEECKKKCVNITEE 263
>gi|337288952|ref|YP_004628424.1| Farnesyltranstransferase [Thermodesulfobacterium sp. OPB45]
gi|334902690|gb|AEH23496.1| Farnesyltranstransferase [Thermodesulfobacterium geofontis OPF15]
Length = 301
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 165/301 (54%), Gaps = 15/301 (4%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVK--YPEQIYESMRYSVLAKGTKRAPPVMCVAAC 94
S +F+L++Y ++++ LEK + Y +++ + +YS+ A G KR P++C+A+C
Sbjct: 3 SNKFNLESYLKERGKKVEEILEKYFPKEEGYGKRVISAGKYSLFA-GGKRIRPILCLASC 61
Query: 95 ELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDA 154
E+ G + A +E +H SLIHDDLPCMDDD RRG+PS H + AILAGD
Sbjct: 62 EVVGGDWRKILLFAAGIECIHTYSLIHDDLPCMDDDDFRRGKPSCHKAFDEATAILAGDG 121
Query: 155 LFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL-----EGEPNLVE 209
L L FQ V + ++L+ I I++A+G GM GQ +DL +G P +++
Sbjct: 122 LQALAFQFFTHPDLVRNVKKTKLLKAIYIISKAIGFEGMVGGQMVDLLMEGKKGNPRILK 181
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
++ K + E S + G L GA E+++L YG+ +G +Q+VDD+L+ +
Sbjct: 182 WIHLNKTVRLIEASVLSGAILGGAKAKELKALSSYGKNLGFAFQIVDDLLDILGDEKKLG 241
Query: 270 EKK----KKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAAD 325
+K KK+ +Y + +G+EK E+A+ KA L F+K + LPL + ++
Sbjct: 242 KKTFSDVKKQKLTYPSLFGIEKTKELAKRYTEKAISALQPFEK---SALPLKAIAEFVLY 298
Query: 326 R 326
R
Sbjct: 299 R 299
>gi|445494922|ref|ZP_21461966.1| farnesyl diphosphate synthase IspA [Janthinobacterium sp. HH01]
gi|444791083|gb|ELX12630.1| farnesyl diphosphate synthase IspA [Janthinobacterium sp. HH01]
Length = 296
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/273 (35%), Positives = 147/273 (53%), Gaps = 19/273 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P +++++MRY++L G KR P++ AA LFG + A A+EM+HA SL+HDD+P
Sbjct: 31 PAKLHDAMRYALLGGG-KRVRPLLVYAAGALFGADAAILSRAAAAVEMIHAYSLVHDDMP 89
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GDAL F ++S +P R + ++ +A
Sbjct: 90 CMDDDELRRGKPTVHVAYDEATALLVGDALQSQAFL-VLSEADS--IPAARQVAMLRLLA 146
Query: 186 RAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAGADDD--EI 238
A GS GM GQ +DL+ +E + + K G + + V G LAG D + E+
Sbjct: 147 HASGSAGMCGGQAIDLDSVGLSLTLEQLEQMHQLKTGALLRAAVVLGA-LAGKDLEAAEL 205
Query: 239 QSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK----SYVAFYGVEKAMEVAEE 294
Q+L Y RA+G+ +QVVDD+L+A A + + K +YV+ G+E + +A++
Sbjct: 206 QALNDYARAIGLAFQVVDDVLDATADSATLGKTAGKDAADNKPTYVSILGLEPSRALAQK 265
Query: 295 LRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
LR A L F G+ L L D R+
Sbjct: 266 LRLDAHAALAPF---GEKALRLRELADLIVQRK 295
>gi|420144547|ref|ZP_14652035.1| Farnesyl diphosphate synthase [Lactococcus garvieae IPLA 31405]
gi|391855999|gb|EIT66548.1| Farnesyl diphosphate synthase [Lactococcus garvieae IPLA 31405]
Length = 283
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 138/250 (55%), Gaps = 19/250 (7%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVN-RIAAFPTACALEMVHAASLIHDDL 124
P+ + +++ YS LA G KR P++ + E GV A + A +EM+HA SLIHDDL
Sbjct: 22 PQHLADAVTYS-LAAGGKRIRPLLFLKMLESLGVTLETAHYQVAATVEMIHAGSLIHDDL 80
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MD+D RRGQ +NH + AILAGDALF + + + + +P V+ ++ E+
Sbjct: 81 PAMDNDDYRRGQLTNHKKFDEATAILAGDALFLDPYYLLATLS----LPAATVVSLVKEL 136
Query: 185 ARAVGSTGMAAGQFLDLEGE-PNL----VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
+ A GS GM AGQ LD+EGE NL V+ + K G M V G +A ++ I
Sbjct: 137 SFASGSLGMVAGQILDMEGEGKNLSLEQVKEIHHLKTGRMLTFPFVAAGIIAEQSEEVIA 196
Query: 240 SLRRYGRAVGVLYQVVDDIL------EAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAE 293
LR G+ +G+ +Q+ DDI+ E +TP ++ ++K +YVA G++ A E E
Sbjct: 197 KLREIGQNLGLAFQIRDDIIDVTGTFEEIGKTPGKDQAEEK--STYVALLGLKGAQEALE 254
Query: 294 ELRAKAKEEL 303
EL K +L
Sbjct: 255 ELLTAVKSDL 264
>gi|384915972|ref|ZP_10016175.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum
fumariolicum SolV]
gi|384526670|emb|CCG92046.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum
fumariolicum SolV]
Length = 299
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/251 (35%), Positives = 136/251 (54%), Gaps = 14/251 (5%)
Query: 53 IDQNLEKAIT--VKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACA 110
I+ L K +T K P ++E++ YS+ + G KR P++C+A + A P ACA
Sbjct: 19 IESALRKYVTDKSKKPRILHEAIDYSLFS-GGKRLRPILCLAGAHTVCMATDCALPMACA 77
Query: 111 LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPH 170
+E +H SLIHDDLP MD+D RRG+PS H +YG +AIL GDAL L F+ I S P
Sbjct: 78 VECIHTYSLIHDDLPSMDNDDFRRGKPSLHKIYGEAMAILTGDALLALAFE-IASLCSPL 136
Query: 171 LVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAV 225
P + +I E+ARA GS + AGQ DLE E + ++ +K + +
Sbjct: 137 GSSYP-LSTMIWELARAAGSRALVAGQVADLESEGKEIGLTQLRYIHCRKTAALITVALR 195
Query: 226 CGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT----PRDEEKKKKKGKSYVA 281
G A AD+ ++ + +YGR++G+ +Q++DDIL+ T + +K K +Y
Sbjct: 196 LGAMSANADEKTLRLITKYGRSLGLAFQIIDDILDVTQTTEILGKSAGKDQKAKKATYPR 255
Query: 282 FYGVEKAMEVA 292
G+E + + A
Sbjct: 256 IMGLEYSKKAA 266
>gi|302879474|ref|YP_003848038.1| polyprenyl synthetase [Gallionella capsiferriformans ES-2]
gi|302582263|gb|ADL56274.1| Polyprenyl synthetase [Gallionella capsiferriformans ES-2]
Length = 297
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 144/274 (52%), Gaps = 19/274 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P++++++MRY+VL +G KR P++ AA EL G + A ++E++HA SL+HDD+P
Sbjct: 32 PQRLHQAMRYAVL-EGGKRVRPLLAFAAGELTGADIARVDIVAASVELIHAYSLVHDDMP 90
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEP-RVLRVIAEI 184
CMDDD RRG+P+ H Y A+L GD+L L FQ + H L P + + +I +
Sbjct: 91 CMDDDVLRRGKPTCHVQYDEATALLVGDSLQTLAFQLLTEH---RLSDGPQQQMAMIRLL 147
Query: 185 ARAVGSTGMAAGQFLDLEGE------PNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEI 238
A A GS GMA GQ +DL+ P L E + K G + + + G ++
Sbjct: 148 ASASGSRGMAGGQAIDLDSVGKSLTLPEL-ENMHIHKTGALIRAAVLLGAQCGAVSPVQL 206
Query: 239 QSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK----SYVAFYGVEKAMEVAEE 294
L Y + VG+ +QVVDD+L+A+A T + K +YV GV A E+A
Sbjct: 207 ACLDHYAKCVGLAFQVVDDVLDAEADTATLGKTAGKDADNDKPTYVTLLGVTAAREMANN 266
Query: 295 LRAKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
L +E L+ ++GD L D+ R+F
Sbjct: 267 LH---REALESLAEFGDAAQRLRELADFIVLRKF 297
>gi|224135433|ref|XP_002322072.1| predicted protein [Populus trichocarpa]
gi|222869068|gb|EEF06199.1| predicted protein [Populus trichocarpa]
Length = 236
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 128/227 (56%), Gaps = 8/227 (3%)
Query: 44 TYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIA 103
+YWT++ EID +L++AI ++ P ++E M + A + P +C+AACEL G NR
Sbjct: 1 SYWTSVNDEIDAHLKQAIPIRPPLSVFEPMHHLTFA-APRTTAPALCIAACELVGGNRDQ 59
Query: 104 AFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHI 163
A A AL ++HAA+L H+ + + +R G +G +I +L GD + P G + +
Sbjct: 60 AMAAASALRLMHAAALTHEHI-LSTGNRARIGHS-----FGSNIELLTGDGMVPFGLELL 113
Query: 164 VSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLE-GEPNLVEFVQEKKFGEMSEC 222
R+LRVI EI +A+GS GMA GQ+ + G+ + ++ V +KK GE+ C
Sbjct: 114 AKSDDLTQNNSERILRVIIEITQAMGSQGMALGQYNQFQHGQSDYIDHVCKKKEGELHSC 173
Query: 223 SAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
+ G L G ++EI+ LRRYG VG++ V+ + +E K + ++
Sbjct: 174 AGAVGAILGGGTEEEIEKLRRYGLYVGLMQGVLSNWVERKEEVSMEK 220
>gi|194016844|ref|ZP_03055457.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Bacillus pumilus ATCC 7061]
gi|194011450|gb|EDW21019.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Bacillus pumilus ATCC 7061]
Length = 296
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/215 (41%), Positives = 125/215 (58%), Gaps = 11/215 (5%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
PE + SM YS+ A G KR PV+ +A +G N P CA+EM+H SLIHDDLP
Sbjct: 30 PEDLKSSMLYSLKAGG-KRLRPVLVLALLNAYGKNEEDGIPVGCAVEMIHTYSLIHDDLP 88
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH VYG A+LAGDAL F+ I S + + + LR++ E+
Sbjct: 89 CMDDDDLRRGKPTNHKVYGEATAVLAGDALLTESFRLITSQLSSSVSADKK-LRIVDELV 147
Query: 186 RAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
++ G+ GM GQF D+E E V E + +K G++ S G LAGA DD+I+
Sbjct: 148 KSAGALGMVGGQFDDMEAEQKQVSLAELESIHARKTGKLLTFSVAAGAMLAGASDDDIEK 207
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKK 275
LR + +G+ +Q+ DDIL+ + EEK K+
Sbjct: 208 LREFSYHIGIAFQIRDDILDLEGS----EEKIGKR 238
>gi|6016394|sp|O66126.1|ISPA_MICLU RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|2982677|dbj|BAA25265.1| farnesyl diphosphate synthase [Micrococcus luteus]
Length = 291
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 144/276 (52%), Gaps = 20/276 (7%)
Query: 58 EKAITVKYPEQ--IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVH 115
E + +P Q ++E++ YS L+ G KR P++ + + G N P ALEM+H
Sbjct: 18 ESLLNKYHPAQSRLHEAINYS-LSAGGKRIRPLLVLTTLDSLGGNAHDGLPFGIALEMIH 76
Query: 116 AASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEP 175
SLIHDDLP MD+D RRG+ +NH + AILAGDAL FQ I++ L E
Sbjct: 77 TYSLIHDDLPAMDNDDYRRGKLTNHKRFDEATAILAGDALLTDAFQCILN---TQLNAEI 133
Query: 176 RVLRVIAEIARAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFL 230
+ L +I ++ A GS GM GQ LD++GE N +E + K GE+ + V G +
Sbjct: 134 K-LSLINLLSTASGSNGMVYGQMLDMQGEHKTLTLNELERIHIHKTGELIRAAIVSAGII 192
Query: 231 AGADDDEIQSLRRYGRAVGVLYQVVDDILEAK------AQTPRDEEKKKKKGKSYVAFYG 284
+D +I+ L G+ VG+++Q+ DDIL+ + +T + K +YV+ G
Sbjct: 193 MNFNDAQIEQLNIIGKNVGLMFQIKDDILDVEGSFENIGKTVGSDLNNDK--STYVSLLG 250
Query: 285 VEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+E + ++ + + + L + DN+ L ++I
Sbjct: 251 LEASKQLLNDKLTETYDALKTLQPINDNLKTLITYI 286
>gi|251796322|ref|YP_003011053.1| polyprenyl synthetase [Paenibacillus sp. JDR-2]
gi|247543948|gb|ACT00967.1| Polyprenyl synthetase [Paenibacillus sp. JDR-2]
Length = 302
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 138/249 (55%), Gaps = 13/249 (5%)
Query: 41 DLKTYWTTLITEIDQNLEKAITVKY--PEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
D+KTY ++++L +A+ ++ P Q+ ESM YS+ A G + P ++ AA + G
Sbjct: 4 DIKTYLHECAALVEKSLPEALPAEWNIPPQLRESMLYSLQAGGKRLRPALVLAAAEAVHG 63
Query: 99 VNRIA--AFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
A A P ACA+E +H SL+HDDLP MD+D RRG+ +NH V+G +AILAGDAL
Sbjct: 64 QAAAARHALPVACAIEYIHTYSLVHDDLPAMDNDDYRRGKLTNHKVFGEAMAILAGDALL 123
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFV 211
F I + L ++ ++A G+ GM GQ D++GE + +E++
Sbjct: 124 THAFHLIPKVARLGGISAEVALDIVEDLAMLAGARGMVGGQAADMQGEQGITSIEELEYI 183
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
K ++ S GG + GA +++++LR YGR +G+ +Q+ DDIL+ DE+K
Sbjct: 184 HLHKTSDLIVFSVTAGGRIGGASAEQLEALRHYGRNIGLAFQIQDDILDLIG----DEKK 239
Query: 272 KKKKGKSYV 280
KK S V
Sbjct: 240 LGKKTNSDV 248
>gi|326387412|ref|ZP_08209021.1| farnesyl-diphosphate synthase [Novosphingobium nitrogenifigens DSM
19370]
gi|326208068|gb|EGD58876.1| farnesyl-diphosphate synthase [Novosphingobium nitrogenifigens DSM
19370]
Length = 305
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 155/304 (50%), Gaps = 31/304 (10%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPE----QIYESMRYSVLAKGTKRAPPVMCVAACELF 97
LK + E+D + T+ PE ++YE+MRYS + G KR P++ A LF
Sbjct: 14 LKDALVRIQQEVDACFDA--TLPVPEDPRARLYEAMRYSAIGGG-KRLRPLLVTAVASLF 70
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
GV+R A ALE +H SLIHDD+PCMD+D R G+P+ H Y A+LAGDAL
Sbjct: 71 GVDRSVAVRVGTALESIHVYSLIHDDMPCMDNDSLRHGKPTVHLAYDDATAVLAGDALQA 130
Query: 158 LGFQHIVSHTPPHLVPEPRV-LRVIAEIARAVGSTGMAAGQFLDLEGEP-----NLVEFV 211
L F+ + + P LV +P V + ++ +A A G GM GQ +D+ E V +
Sbjct: 131 LAFEIL---SDPDLVGDPFVRIELVRTLAHASGINGMVGGQMMDIAAETASFDLATVTRL 187
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEE- 270
Q+ K G + + G L + LR Y R +G+ +Q+VDD+L+A+ DEE
Sbjct: 188 QQLKTGALLAAAVEMGAILGHVPPEGRTHLRGYARNIGLAFQIVDDLLDAEG----DEEA 243
Query: 271 ------KKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYA 323
K + GK ++V+ G+++A A L +A E L+ YG+ L + Y
Sbjct: 244 AGKALRKDAEAGKETFVSLLGIDRARSQARVLVDQAIEFLN---SYGEEAELLRAVARYI 300
Query: 324 ADRE 327
+R+
Sbjct: 301 VERD 304
>gi|53722784|ref|YP_111769.1| geranyltranstransferase [Burkholderia pseudomallei K96243]
gi|76817464|ref|YP_336001.1| geranyltranstransferase [Burkholderia pseudomallei 1710b]
gi|126442384|ref|YP_001063528.1| geranyltranstransferase [Burkholderia pseudomallei 668]
gi|126458477|ref|YP_001076425.1| geranyltranstransferase [Burkholderia pseudomallei 1106a]
gi|134278219|ref|ZP_01764933.1| geranyltranstransferase [Burkholderia pseudomallei 305]
gi|167724592|ref|ZP_02407828.1| geranyltranstransferase [Burkholderia pseudomallei DM98]
gi|167743543|ref|ZP_02416317.1| geranyltranstransferase [Burkholderia pseudomallei 14]
gi|167820731|ref|ZP_02452411.1| geranyltranstransferase [Burkholderia pseudomallei 91]
gi|167829090|ref|ZP_02460561.1| geranyltranstransferase [Burkholderia pseudomallei 9]
gi|167850567|ref|ZP_02476075.1| geranyltranstransferase [Burkholderia pseudomallei B7210]
gi|167899160|ref|ZP_02486561.1| geranyltranstransferase [Burkholderia pseudomallei 7894]
gi|167907503|ref|ZP_02494708.1| geranyltranstransferase [Burkholderia pseudomallei NCTC 13177]
gi|167915842|ref|ZP_02502933.1| geranyltranstransferase [Burkholderia pseudomallei 112]
gi|167923681|ref|ZP_02510772.1| geranyltranstransferase [Burkholderia pseudomallei BCC215]
gi|217422667|ref|ZP_03454170.1| geranyltranstransferase [Burkholderia pseudomallei 576]
gi|226195863|ref|ZP_03791450.1| geranyltranstransferase [Burkholderia pseudomallei Pakistan 9]
gi|237509552|ref|ZP_04522267.1| geranyltranstransferase [Burkholderia pseudomallei MSHR346]
gi|242312765|ref|ZP_04811782.1| geranyltranstransferase [Burkholderia pseudomallei 1106b]
gi|254184923|ref|ZP_04891512.1| geranyltranstransferase [Burkholderia pseudomallei 1655]
gi|254186152|ref|ZP_04892670.1| geranyltranstransferase [Burkholderia pseudomallei Pasteur 52237]
gi|254194119|ref|ZP_04900551.1| geranyltranstransferase [Burkholderia pseudomallei S13]
gi|254263700|ref|ZP_04954565.1| geranyltranstransferase [Burkholderia pseudomallei 1710a]
gi|254301205|ref|ZP_04968649.1| geranyltranstransferase [Burkholderia pseudomallei 406e]
gi|52213198|emb|CAH39238.1| geranyltranstransferase [Burkholderia pseudomallei K96243]
gi|76581937|gb|ABA51411.1| geranyltranstransferase [Burkholderia pseudomallei 1710b]
gi|126221875|gb|ABN85380.1| geranyltranstransferase [Burkholderia pseudomallei 668]
gi|126232245|gb|ABN95658.1| geranyltranstransferase [Burkholderia pseudomallei 1106a]
gi|134250003|gb|EBA50083.1| geranyltranstransferase [Burkholderia pseudomallei 305]
gi|157811223|gb|EDO88393.1| geranyltranstransferase [Burkholderia pseudomallei 406e]
gi|157933838|gb|EDO89508.1| geranyltranstransferase [Burkholderia pseudomallei Pasteur 52237]
gi|169650870|gb|EDS83563.1| geranyltranstransferase [Burkholderia pseudomallei S13]
gi|184215515|gb|EDU12496.1| geranyltranstransferase [Burkholderia pseudomallei 1655]
gi|217394898|gb|EEC34917.1| geranyltranstransferase [Burkholderia pseudomallei 576]
gi|225932348|gb|EEH28348.1| geranyltranstransferase [Burkholderia pseudomallei Pakistan 9]
gi|235001757|gb|EEP51181.1| geranyltranstransferase [Burkholderia pseudomallei MSHR346]
gi|242136004|gb|EES22407.1| geranyltranstransferase [Burkholderia pseudomallei 1106b]
gi|254214702|gb|EET04087.1| geranyltranstransferase [Burkholderia pseudomallei 1710a]
Length = 294
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/269 (37%), Positives = 141/269 (52%), Gaps = 22/269 (8%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P Q++E+MRY+VL G KR P++C AA EL G + A + ALEM+H SL+HDD+P
Sbjct: 29 PAQLHEAMRYAVLGGG-KRVRPLLCHAAGELTGASEAARDAASAALEMIHVYSLVHDDMP 87
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GDAL F V+ T +P R ++ E+A
Sbjct: 88 CMDDDALRRGKPTVHVKYDEPTALLVGDALQSQAF---VALTDAAALPADRQAALVRELA 144
Query: 186 RAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAGA--DDDEI 238
A GS GMA GQ +DL + +E + K G + S V G LAG D +
Sbjct: 145 LASGSIGMAGGQAIDLASVGVALTRDALETMHRMKTGALLRAS-VRMGALAGETPSGDAM 203
Query: 239 QSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEV 291
++L Y AVG+ +QVVDDIL+ T K GK +YV+ G++ + +
Sbjct: 204 RALDAYAAAVGLAFQVVDDILDV---TTDSATLGKTAGKDAANDKPTYVSIIGLDASRAL 260
Query: 292 AEELRAKAKEELDRFKKYGDNVLPLYSFI 320
A +LRA A L+ F + L +
Sbjct: 261 AAQLRADAHAALEPFGARAQRLAELADLV 289
>gi|89895097|ref|YP_518584.1| hypothetical protein DSY2351 [Desulfitobacterium hafniense Y51]
gi|423073546|ref|ZP_17062285.1| putative geranyltranstransferase [Desulfitobacterium hafniense DP7]
gi|89334545|dbj|BAE84140.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|361855624|gb|EHL07587.1| putative geranyltranstransferase [Desulfitobacterium hafniense DP7]
Length = 289
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/268 (38%), Positives = 143/268 (53%), Gaps = 17/268 (6%)
Query: 71 ESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDD 130
ESM YS L+ G KR PV+ +AA G + P CALE++H SLIHDDLP MD+D
Sbjct: 29 ESMNYS-LSAGGKRIRPVLALAAAHAVGGDCEDILPAVCALELIHTYSLIHDDLPAMDND 87
Query: 131 PSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGS 190
RRG+ +NH V+G AILAGDAL F+ I P V R LR I E+A+A G
Sbjct: 88 DYRRGRLANHKVFGEGQAILAGDALLTYAFELIAQ--PMSGVEPQRQLRAIREVAQAAGP 145
Query: 191 TGMAAGQFLDLEGEP---NLVEF--VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYG 245
GM GQ LDLE E NL E V K G + +A G LAG +++I++L Y
Sbjct: 146 EGMVGGQMLDLEAEEKQLNLAELEQVHRLKTGAILVVAARLGAILAGGTEEKIEALTSYA 205
Query: 246 RAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAK 300
+A+G+ +Q+ DDIL+ ++ + P + ++ K +Y + G+ A EL+ K
Sbjct: 206 QAIGLAFQIKDDILDLESDSETLGKPVHSDLRQHK-STYPSLMGLAGA---KLELKIKTD 261
Query: 301 EELDRFKKYGDNVLPLYSFIDYAADREF 328
E G+ L+ DY A R++
Sbjct: 262 EAHAALAVLGERAGFLHELADYIAQRKY 289
>gi|168214394|ref|ZP_02640019.1| geranyltranstransferase [Clostridium perfringens CPE str. F4969]
gi|168215448|ref|ZP_02641073.1| geranyltranstransferase [Clostridium perfringens NCTC 8239]
gi|170714145|gb|EDT26327.1| geranyltranstransferase [Clostridium perfringens CPE str. F4969]
gi|182382163|gb|EDT79642.1| geranyltranstransferase [Clostridium perfringens NCTC 8239]
Length = 290
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 143/267 (53%), Gaps = 26/267 (9%)
Query: 47 TTLITEIDQNLEKAITV--KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAA 104
+L E+DQ+L+ +Y + +Y+SM YS+ G KR P++ + + ++ +
Sbjct: 4 NSLKEEVDQSLKAYFNKDREYNKVLYDSMAYSINV-GGKRIRPILMLLSYYIYKSDYKKI 62
Query: 105 FPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIV 164
A A+EM+H SLIHDDLPCMD+D RRG+P+NH V+G IA+LAGDAL + +V
Sbjct: 63 LTPAMAIEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKILV 122
Query: 165 SHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP------NLVEFVQEKKFGE 218
++ L L+ IA A GS GM GQ +D+ E ++++ KK GE
Sbjct: 123 DYS---LEEGKSALKATKIIADAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGE 179
Query: 219 MSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP-------RDEEK 271
+ + S + G LA A + +I+ L +G +G+ +Q+ DDIL+ +D+E
Sbjct: 180 LIKASIMSGAVLAEASEGDIKKLEDFGYKLGLAFQIKDDILDVVGNAKDLGKNVHKDQES 239
Query: 272 KKKKGKSYVAFYGVE----KAMEVAEE 294
K +Y+ +G+E K + + EE
Sbjct: 240 NK---NNYITIFGLEECKKKCVNITEE 263
>gi|403523640|ref|YP_006659209.1| geranyltranstransferase [Burkholderia pseudomallei BPC006]
gi|403078707|gb|AFR20286.1| geranyltranstransferase [Burkholderia pseudomallei BPC006]
Length = 268
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/269 (37%), Positives = 141/269 (52%), Gaps = 22/269 (8%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P Q++E+MRY+VL G KR P++C AA EL G + A + ALEM+H SL+HDD+P
Sbjct: 3 PAQLHEAMRYAVLGGG-KRVRPLLCHAAGELTGASEAARDAASAALEMIHVYSLVHDDMP 61
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GDAL F V+ T +P R ++ E+A
Sbjct: 62 CMDDDALRRGKPTVHVKYDEPTALLVGDALQSQAF---VALTDAAALPADRQAALVRELA 118
Query: 186 RAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAGA--DDDEI 238
A GS GMA GQ +DL + +E + K G + S V G LAG D +
Sbjct: 119 LASGSIGMAGGQAIDLASVGVALTRDALETMHRMKTGALLRAS-VRMGALAGETPSGDAM 177
Query: 239 QSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEV 291
++L Y AVG+ +QVVDDIL+ T K GK +YV+ G++ + +
Sbjct: 178 RALDAYAAAVGLAFQVVDDILDV---TTDSATLGKTAGKDAANDKPTYVSIIGLDASRAL 234
Query: 292 AEELRAKAKEELDRFKKYGDNVLPLYSFI 320
A +LRA A L+ F + L +
Sbjct: 235 AAQLRADAHAALEPFGARAQRLAELADLV 263
>gi|327398343|ref|YP_004339212.1| farnesyltranstransferase [Hippea maritima DSM 10411]
gi|327180972|gb|AEA33153.1| Farnesyltranstransferase [Hippea maritima DSM 10411]
Length = 291
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/253 (33%), Positives = 141/253 (55%), Gaps = 27/253 (10%)
Query: 64 KYPEQIYESMRYSVLAKGTK-RAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHD 122
++P E++ Y+ + G + RA VMC A ++FG + + A A+E++HA SLIHD
Sbjct: 24 RFPPIFQEALFYTPKSGGKRIRAMLVMC--AADMFGADETKSLHIASAIELMHAYSLIHD 81
Query: 123 DLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIA 182
DLP MD+D RRG+P+NH VYG D+A+L GD L F ++++ P + + R ++++
Sbjct: 82 DLPVMDNDDFRRGKPANHKVYGEDLALLVGDGLNTYTF-NVIADAP---IDDARKVKIVK 137
Query: 183 EIARAVGSTGMAAGQFLD-------LEGEPN--LVEFVQEKKFGEMSECSAVCGGFLAGA 233
++ G GM GQ +D L+G + LV F+ + K ++ + S VCG
Sbjct: 138 WLSNNAGIGGMVVGQVVDVLSSRDRLKGHSHKKLVNFIHKHKTAKLIQASVVCGAICGNP 197
Query: 234 DDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKK-------GKSYVAFYGVE 286
DD ++ L +YG GV +Q++DD L+ DEEK KK +Y YG++
Sbjct: 198 DDVQLDRLAKYGLYAGVAFQIIDDYLDVVG----DEEKLGKKKVDEINNTLTYPKVYGLK 253
Query: 287 KAMEVAEELRAKA 299
++ ++A++L+ A
Sbjct: 254 RSYDIAQKLKDMA 266
>gi|168206126|ref|ZP_02632131.1| geranyltranstransferase [Clostridium perfringens E str. JGS1987]
gi|170662394|gb|EDT15077.1| geranyltranstransferase [Clostridium perfringens E str. JGS1987]
Length = 290
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 143/267 (53%), Gaps = 26/267 (9%)
Query: 47 TTLITEIDQNLEKAITV--KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAA 104
+L E+DQ+L+ +Y + +Y+SM YS+ G KR P++ + + ++ +
Sbjct: 4 NSLKEEVDQSLKAYFNKDREYNKVLYDSMAYSINV-GGKRIRPILMLLSYYIYKSDYKKI 62
Query: 105 FPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIV 164
A A+EM+H SLIHDDLPCMD+D RRG+P+NH V+G IA+LAGDAL + +V
Sbjct: 63 LTPAMAIEMIHTYSLIHDDLPCMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKVLV 122
Query: 165 SHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP------NLVEFVQEKKFGE 218
++ L L+ IA A GS GM GQ +D+ E ++++ KK GE
Sbjct: 123 DYS---LEEGKSALKATKIIADAAGSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGE 179
Query: 219 MSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP-------RDEEK 271
+ + S + G LA A + +I+ L +G +G+ +Q+ DDIL+ +D+E
Sbjct: 180 LIKASIMSGAVLAEASEGDIKKLEDFGYKLGLAFQIKDDILDVVGNAKDLGKNVHKDQES 239
Query: 272 KKKKGKSYVAFYGVE----KAMEVAEE 294
K +Y+ +G+E K + + EE
Sbjct: 240 NK---NNYITIFGLEECKKKCVNITEE 263
>gi|386865572|ref|YP_006278520.1| geranyltranstransferase [Burkholderia pseudomallei 1026b]
gi|418397015|ref|ZP_12970765.1| geranyltranstransferase [Burkholderia pseudomallei 354a]
gi|418536793|ref|ZP_13102462.1| geranyltranstransferase [Burkholderia pseudomallei 1026a]
gi|418544104|ref|ZP_13109416.1| geranyltranstransferase [Burkholderia pseudomallei 1258a]
gi|418550945|ref|ZP_13115892.1| geranyltranstransferase [Burkholderia pseudomallei 1258b]
gi|418556612|ref|ZP_13121236.1| geranyltranstransferase [Burkholderia pseudomallei 354e]
gi|385350376|gb|EIF56920.1| geranyltranstransferase [Burkholderia pseudomallei 1258b]
gi|385350773|gb|EIF57295.1| geranyltranstransferase [Burkholderia pseudomallei 1258a]
gi|385351685|gb|EIF58151.1| geranyltranstransferase [Burkholderia pseudomallei 1026a]
gi|385366777|gb|EIF72379.1| geranyltranstransferase [Burkholderia pseudomallei 354e]
gi|385369579|gb|EIF74894.1| geranyltranstransferase [Burkholderia pseudomallei 354a]
gi|385662700|gb|AFI70122.1| geranyltranstransferase [Burkholderia pseudomallei 1026b]
Length = 285
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/269 (37%), Positives = 141/269 (52%), Gaps = 22/269 (8%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P Q++E+MRY+VL G KR P++C AA EL G + A + ALEM+H SL+HDD+P
Sbjct: 20 PAQLHEAMRYAVLGGG-KRVRPLLCHAAGELTGASEAARDAASAALEMIHVYSLVHDDMP 78
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GDAL F V+ T +P R ++ E+A
Sbjct: 79 CMDDDALRRGKPTVHVKYDEPTALLVGDALQSQAF---VALTDAAALPADRQAALVRELA 135
Query: 186 RAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAGA--DDDEI 238
A GS GMA GQ +DL + +E + K G + S V G LAG D +
Sbjct: 136 LASGSIGMAGGQAIDLASVGVALTRDALETMHRMKTGALLRAS-VRMGALAGETPSGDAM 194
Query: 239 QSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEV 291
++L Y AVG+ +QVVDDIL+ T K GK +YV+ G++ + +
Sbjct: 195 RALDAYAAAVGLAFQVVDDILDV---TTDSATLGKTAGKDAANDKPTYVSIIGLDASRAL 251
Query: 292 AEELRAKAKEELDRFKKYGDNVLPLYSFI 320
A +LRA A L+ F + L +
Sbjct: 252 AAQLRADAHAALEPFGARAQRLAELADLV 280
>gi|335357254|ref|ZP_08549124.1| geranyltranstransferase [Lactobacillus animalis KCTC 3501]
Length = 292
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 154/294 (52%), Gaps = 20/294 (6%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPEQ--IYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
L T+ +I ++Q++ + ++ E + +M+YS+ A G KR P++ + C+ G
Sbjct: 3 LATFQNKMIPLLEQHMRHYL-AQFTENKTLQAAMQYSLEAGG-KRIRPLLIMLICQSLG- 59
Query: 100 NRIA--AFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
+I A +LE +H SLIHDDLP MD+D RRG+P+NH V+G DIA+LAGDAL
Sbjct: 60 KKIDPDVLSVAGSLEFLHTYSLIHDDLPEMDNDDLRRGKPTNHKVFGQDIAVLAGDALLT 119
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP---NLVEFVQ-- 212
F I L P+ RV ++AE+A+A G+ GM AGQ D+ GE L E +Q
Sbjct: 120 EAFGWIAK---TKLSPKKRV-TLVAELAKAAGANGMVAGQTSDILGEKTTLTLAELMQVH 175
Query: 213 EKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKK 272
+ K G++ E + G L GA + Q+L +G+ G+ +Q+ DDIL+ A T +
Sbjct: 176 KNKTGQLLEYACFAGAILGGATPKQEQALVTFGQKFGLAFQIYDDILDVTATTAELGKTA 235
Query: 273 KK----KGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
K +Y G+E A + +AK++L+ G L ++Y
Sbjct: 236 NKDVAENKNTYPRLLGLEGAKQALANTLEQAKDQLEFLAGSGFETSLLRQVLEY 289
>gi|52080961|ref|YP_079752.1| polyprenyl synthetase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|319645081|ref|ZP_07999314.1| YqiD protein [Bacillus sp. BT1B_CT2]
gi|404489843|ref|YP_006713949.1| (2E,6E)-farnesyl diphosphate synthase IspA [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|423682933|ref|ZP_17657772.1| polyprenyl synthetase [Bacillus licheniformis WX-02]
gi|52004172|gb|AAU24114.1| Polyprenyl synthetase,Polyprenyl synthetase [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|52348839|gb|AAU41473.1| (2E,6E)-farnesyl diphosphate synthase IspA [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|317392890|gb|EFV73684.1| YqiD protein [Bacillus sp. BT1B_CT2]
gi|383439707|gb|EID47482.1| polyprenyl synthetase [Bacillus licheniformis WX-02]
Length = 296
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/301 (35%), Positives = 159/301 (52%), Gaps = 25/301 (8%)
Query: 42 LKTYWTTLITEIDQNLEKAIT-VKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVN 100
L+ + + T I++ L I ++ P + ESM YS+ A G KR P++ +A +G +
Sbjct: 5 LEGFLKSRKTVIEERLPMYIKDLQAPSILKESMLYSLEA-GGKRLRPILVLALLHAYGKD 63
Query: 101 RIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGF 160
A P CA+EM+H SLIHDDLPCMDDD RRG+P+NH +YG AILAGDAL F
Sbjct: 64 EEAGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKIYGEATAILAGDALLTESF 123
Query: 161 QHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----VQEKK 215
+ I S+ P + E R+ R++ E+ A G+ GM GQ LD+E E V + E K
Sbjct: 124 KMITSNMPSDVSAEKRI-RLVNELISAAGAEGMVGGQILDMEAESKSVSLDELQRIHEGK 182
Query: 216 FGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK---K 272
++ S + G LA A + EI+ LR + +G+ +Q+ DDIL+ + + ++
Sbjct: 183 TAKLLSFSVIAGAILADASEKEIEKLREFSHHIGIGFQIRDDILDLEGSEDKIGKRIGSD 242
Query: 273 KKKGKS-YVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPL-----YSFIDYAADR 326
GKS Y + +E A + +E KAK+ + LPL Y F D A R
Sbjct: 243 ASNGKSTYPSLLSLEGASQKLDEHIEKAKQLISE--------LPLEKELMYEFCDMIAAR 294
Query: 327 E 327
+
Sbjct: 295 D 295
>gi|114769861|ref|ZP_01447471.1| geranylgeranyl pyrophosphate synthetase [Rhodobacterales bacterium
HTCC2255]
gi|114549566|gb|EAU52448.1| geranylgeranyl pyrophosphate synthetase [alpha proteobacterium
HTCC2255]
Length = 291
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 156/301 (51%), Gaps = 23/301 (7%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
F+++ T I EI L++ + + + + +R++VL G KR + + +C +F
Sbjct: 3 NFNVQLNDTASIVEI--ALKEMLQKQGNDLMSAPIRHAVL-NGGKRLRAFLVIHSCNIFE 59
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
V + A A A+E +HA SL+HDDLPCMDDD RRG+P+ H + A L GDAL L
Sbjct: 60 VQKDTAIQAAIAIECLHAYSLVHDDLPCMDDDELRRGKPTVHVKWDEATATLTGDALQAL 119
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP-------NLVEFV 211
F+ I S + R++ ++ ++A+A G GM GQ D++ E N + +
Sbjct: 120 AFELIASLPNTDAI---RIVELLKKLAKASGMQGMVLGQAQDIQAEKSEVNLNINDITSL 176
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQ---TPRD 268
Q+ K G + E SA+ G L+ DD + L Y +++G+ +Q+ DDIL+ + +
Sbjct: 177 QQNKTGALIEWSAISGAILSNHDD---RKLLDYAKSIGLAFQIQDDILDIEGDAVLAGKR 233
Query: 269 EEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+K GK ++V+ G+E A A+EL +E +D YGD P+ + +R+
Sbjct: 234 LQKDVSAGKATFVSLLGIENAKLRAKEL---IEEAIDALSDYGDKAEPMRQVAKFIIERK 290
Query: 328 F 328
Sbjct: 291 M 291
>gi|365134906|ref|ZP_09343465.1| hypothetical protein HMPREF1032_01261 [Subdoligranulum sp.
4_3_54A2FAA]
gi|363613233|gb|EHL64751.1| hypothetical protein HMPREF1032_01261 [Subdoligranulum sp.
4_3_54A2FAA]
Length = 293
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/262 (36%), Positives = 144/262 (54%), Gaps = 16/262 (6%)
Query: 43 KTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRI 102
+ Y T T + Q ++ + ++ E+ RYS+ G KR V+C+A C++ NR
Sbjct: 8 QAYLNTAETALAQQADRCFNER--SRVCEAARYSLFGGG-KRVRAVLCLAVCDMLDGNRN 64
Query: 103 AAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQH 162
AA A +EM+H SLIHDDLPCMD+D RRG+PS H +G A+LAGD L F+
Sbjct: 65 AAACYAAGVEMLHCYSLIHDDLPCMDNDDMRRGRPSCHKAFGEATALLAGDTLLTAAFE- 123
Query: 163 IVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNLVEFVQE---KKFG 217
+S +P V + ++RA G+ GM GQ LDL E +P E ++E K G
Sbjct: 124 TLSGSPGTAVQNT---AAVCALSRAAGANGMVWGQELDLTFEEKPATAEELREVHRNKTG 180
Query: 218 EMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA---QTPRDEEKKKK 274
+ +A G A ADD + Q++ RY +VG+++Q++DDIL+ A Q +
Sbjct: 181 MLINAAAQLGAVAASADDIQRQAIARYAFSVGLVFQIIDDILDVTATAQQLGKPIGSDAA 240
Query: 275 KGK-SYVAFYGVEKAMEVAEEL 295
GK ++V +GVE++ +A+EL
Sbjct: 241 NGKTTFVTLHGVERSRGIAQEL 262
>gi|336427103|ref|ZP_08607108.1| hypothetical protein HMPREF0994_03114 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336010305|gb|EGN40291.1| hypothetical protein HMPREF0994_03114 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 643
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 140/270 (51%), Gaps = 24/270 (8%)
Query: 50 ITEIDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPT 107
+ EI++ L+K + V Y + + E+M YSVLA G KR P++ +FG P
Sbjct: 11 VEEIEKILKKYLPAEVGYQKTVLEAMNYSVLA-GGKRLRPMLMQETFRMFGGEGHLVEPF 69
Query: 108 ACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQ---HIV 164
A+EM+H SL+HDDLPCMD+D RRG+ + H VYG +A+LAGDAL F+
Sbjct: 70 MAAMEMIHTYSLVHDDLPCMDNDEYRRGRKTTHAVYGEGMAVLAGDALLNYAFETACRSF 129
Query: 165 SHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE--------PNLVEFVQEKKF 216
+ L PR + + +A+ G GM GQ D E E L+ ++ E K
Sbjct: 130 AMAEEELGVLPRCAKAMTILAQKAGIYGMIGGQTADTEAEELPEEKVTQELLLYIHENKT 189
Query: 217 GEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA-------QTPRDE 269
+ + S + G LAGA D+++Q L + G +G+ +Q+ DDIL+ + QT D
Sbjct: 190 AALIQSSMMIGAVLAGASDEQLQRLEKIGTCIGLAFQIQDDILDITSSLEVLGKQTGSDL 249
Query: 270 EKKKKKGKSYVAFYGVEKAMEVAEELRAKA 299
+ K +YV+ G+E +++ L +A
Sbjct: 250 KNHK---VTYVSLNGMEHSVKEVRRLSEEA 276
>gi|342732335|ref|YP_004771174.1| geranyltranstransferase [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|384455738|ref|YP_005668333.1| geranyltranstransferase [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|417960911|ref|ZP_12603420.1| Putative geranyltranstransferase [Candidatus Arthromitus sp. SFB-2]
gi|417965750|ref|ZP_12607232.1| Putative geranyltranstransferase [Candidatus Arthromitus sp. SFB-4]
gi|417966284|ref|ZP_12607675.1| Putative geranyltranstransferase [Candidatus Arthromitus sp. SFB-5]
gi|418016264|ref|ZP_12655829.1| geranyltranstransferase [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|418372590|ref|ZP_12964682.1| Putative geranyltranstransferase [Candidatus Arthromitus sp.
SFB-mouse-SU]
gi|342329790|dbj|BAK56432.1| geranyltranstransferase [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|345506599|gb|EGX28893.1| geranyltranstransferase [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|346984081|dbj|BAK79757.1| geranyltranstransferase [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|380334876|gb|EIA25201.1| Putative geranyltranstransferase [Candidatus Arthromitus sp. SFB-2]
gi|380335845|gb|EIA25946.1| Putative geranyltranstransferase [Candidatus Arthromitus sp. SFB-4]
gi|380342259|gb|EIA30704.1| Putative geranyltranstransferase [Candidatus Arthromitus sp.
SFB-mouse-SU]
gi|380343149|gb|EIA31558.1| Putative geranyltranstransferase [Candidatus Arthromitus sp. SFB-5]
Length = 289
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 135/269 (50%), Gaps = 16/269 (5%)
Query: 69 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMD 128
IYESM YS L+ G KR P++ + LF N P AC +EM+H SLIHDDLP MD
Sbjct: 28 IYESMSYS-LSIGGKRVRPILFLYTYLLFKDNYKDLIPFACYIEMIHTYSLIHDDLPSMD 86
Query: 129 DDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAV 188
+D RRG +NH + IA+L+GD L ++++ + + + L +A+++
Sbjct: 87 NDMLRRGNLTNHVKFSESIALLSGDGLLTEALKNMIEFSIRY---GMKALYATFVVAKSI 143
Query: 189 GSTGMAAGQFLDL-----EGEPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRR 243
GM GQ +D+ E ++++ K G + + S + + A D+EI L
Sbjct: 144 DCDGMIGGQVVDIITKNKELNEYTLKYINRNKTGALIKASVLSAAYFGDARDEEIVKLSE 203
Query: 244 YGRAVGVLYQVVDDILEAKAQT----PRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKA 299
Y +G+ +Q++DDIL+ + T + K +YV YG+++ ++ EE KA
Sbjct: 204 YAHYIGLTFQIIDDILDKTSDTQTLGKTSNIDNRNKKFTYVDLYGIDECKKICEENTNKA 263
Query: 300 KEELDRFKKYGDNVLPLYSFIDYAADREF 328
L+ K +V L F Y +R+F
Sbjct: 264 INILNSLDK---DVSNLIDFTKYMLNRKF 289
>gi|423521962|ref|ZP_17498435.1| hypothetical protein IGC_01345 [Bacillus cereus HuA4-10]
gi|401176624|gb|EJQ83819.1| hypothetical protein IGC_01345 [Bacillus cereus HuA4-10]
Length = 297
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/283 (35%), Positives = 159/283 (56%), Gaps = 18/283 (6%)
Query: 51 TEIDQNL-EKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTAC 109
T +++NL A ++ P + E+M YS L G KR P++ A + FG R AC
Sbjct: 15 TFVEENLVSYANELQCPNVLREAMAYS-LEAGGKRLRPLLLFATLQAFGKERNLGVGAAC 73
Query: 110 ALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPP 169
ALEM+H SLIHDDLPCMDDD RRG+P+NH V+G +A+LAGD L FQ I+++
Sbjct: 74 ALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQK 133
Query: 170 HLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSA 224
+ E +V R++ E+A+A G GM AGQ D+E E N +E++ + K G++ E +
Sbjct: 134 EISAEKKV-RLVLELAKAAGPEGMVAGQVADMEAEGKRLTINELEYIHKHKTGKLLEFAV 192
Query: 225 VCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------K 277
+ G L+ A +++ + L + + +G+ +Q+ DDIL+ + +EE K G
Sbjct: 193 LAGAILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVEGT---EEEIGKPIGSDASNEKS 249
Query: 278 SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+Y + V++A + EE AKAK+ + + + +L + I
Sbjct: 250 TYTTLFTVDRAKSILEEKIAKAKDSISSLQLQDEYLLSICDLI 292
>gi|149181862|ref|ZP_01860351.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
sp. SG-1]
gi|148850401|gb|EDL64562.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
sp. SG-1]
Length = 295
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 133/248 (53%), Gaps = 15/248 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
PE++ E+M YS+ A G KR P++ A G + +A ALEM+H SLIHDDLP
Sbjct: 31 PEKVKEAMAYSLKA-GGKRIRPLLLFATLHTLGKDPKIGLESAAALEMIHTYSLIHDDLP 89
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
MD+D RRG+P+NH V+G AILAGD L F+ +++ TP V +++R+++ +A
Sbjct: 90 SMDNDDLRRGKPTNHKVFGEATAILAGDGLLTYSFE-VLAGTPD--VSAEKLIRLVSLLA 146
Query: 186 RAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
++ G GM GQ D+EGE +E++ + K G + S + LA + +++I
Sbjct: 147 KSAGPEGMVGGQAADMEGESQSLSVEELEYIHKNKTGRLLAFSVMAAAILADSTEEQISL 206
Query: 241 LRRYGRAVGVLYQVVDDIL-----EAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEEL 295
L Y +G+ +Q+ DDIL E K P ++ K K +Y A +E A E
Sbjct: 207 LEEYAFHIGLAFQIQDDILDVEGSEEKIGKPVGSDENKFK-STYPALLTLEGAKEKLRNH 265
Query: 296 RAKAKEEL 303
K K L
Sbjct: 266 LQKGKSAL 273
>gi|229061868|ref|ZP_04199198.1| Geranyltranstransferase [Bacillus cereus AH603]
gi|228717429|gb|EEL69097.1| Geranyltranstransferase [Bacillus cereus AH603]
Length = 297
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/283 (35%), Positives = 158/283 (55%), Gaps = 18/283 (6%)
Query: 51 TEIDQNL-EKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTAC 109
T +++NL A ++ P + E+M YS L G KR P++ A + FG R AC
Sbjct: 15 TFVEENLVSYANELQCPNVLREAMAYS-LEAGGKRLRPLLLFATLQAFGKERNLGVGAAC 73
Query: 110 ALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPP 169
ALEM+H SLIHDDLPCMDDD RRG+P+NH V+G +A+LAGD L FQ I+++
Sbjct: 74 ALEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQK 133
Query: 170 HLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSA 224
+ E +V R++ E+A+A G GM AGQ D+E E N +E++ K G++ E +
Sbjct: 134 EISAEKKV-RLVLELAKAAGPEGMVAGQVADMEAEGKRLTINELEYIHNHKTGKLLEFAV 192
Query: 225 VCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------K 277
+ G L+ A +++ + L + + +G+ +Q+ DDIL+ + +EE K G
Sbjct: 193 LAGAILSDATEEQEEKLLAFAKYIGLAFQIRDDILDVEGT---EEEIGKPIGSDASNEKS 249
Query: 278 SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+Y + V++A + EE AKAK+ + + + +L + I
Sbjct: 250 TYTTLFTVDRAKSILEEKIAKAKDSISSLQLQDEYLLSICDLI 292
>gi|56551751|ref|YP_162590.1| polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ZM4]
gi|384411374|ref|YP_005620739.1| polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|397676323|ref|YP_006517861.1| polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ATCC 29191]
gi|56543325|gb|AAV89479.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ZM4]
gi|335931748|gb|AEH62288.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|395397012|gb|AFN56339.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis ATCC 29191]
Length = 298
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 152/296 (51%), Gaps = 20/296 (6%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYP------EQIYESMRYSVLAKGTKRAPPVMCVAACE 95
+ T++ ++ Q++++ + P ++ E+MRY+ + G KR P++ VA C
Sbjct: 1 MAVNLKTMMEQVAQDIDRLFAEQLPVPEDPRRRLVEAMRYAAIG-GGKRLRPLLVVATCA 59
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
LF V+R AA A+E +H SLIHDD+PCMD+D RRG+P+ H + A+L+GDAL
Sbjct: 60 LFNVDREAALRVGMAIECIHVYSLIHDDMPCMDNDDLRRGKPTVHKAFDDASAVLSGDAL 119
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF----- 210
L F+ I+S H P R L +I +A A G GM GQ +DL E + V F
Sbjct: 120 QALAFE-ILSEEKIHTDPHVR-LELIQALAIASGKDGMVGGQAIDLAAETSTVPFDLPTI 177
Query: 211 --VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEA---KAQT 265
+Q+ K G + G + + D L+ Y R +G+ +Q+ DD+++A +A
Sbjct: 178 TRLQQLKTGALFGFCLEAGAIMGRQNKDIRDRLKAYARDIGLAFQIADDLIDAEGDEAVA 237
Query: 266 PRDEEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+ K GK ++++ G+EKA A+ L +A L F D + + +I
Sbjct: 238 GKAVGKDAAAGKATFLSLLGLEKARSQAQALVDQAIAHLSVFGSEADYLRSIARYI 293
>gi|346306460|ref|ZP_08848616.1| hypothetical protein HMPREF9457_00325 [Dorea formicigenerans
4_6_53AFAA]
gi|345897834|gb|EGX67731.1| hypothetical protein HMPREF9457_00325 [Dorea formicigenerans
4_6_53AFAA]
Length = 300
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/273 (34%), Positives = 143/273 (52%), Gaps = 20/273 (7%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVK--YPEQIYESMRYSVLAKGTKRAPPVMCVAAC 94
S D K + EI+ +L+ + + Y + I E+M YS+LA G KR P++
Sbjct: 2 SLNLDFKVQKEQKVREIEDSLQNYLPKQKGYQKIIMEAMEYSLLA-GGKRLRPMLMKETY 60
Query: 95 ELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDA 154
LFG + P A+EMVH SL+HDDLP MD+D RRG+ + H VYG D+AILAGDA
Sbjct: 61 TLFGGHSKVIEPFMAAIEMVHTYSLVHDDLPAMDNDEYRRGRKTTHVVYGEDMAILAGDA 120
Query: 155 LFPLGFQHIVSH---TPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG-----EPN 206
L F+ V P + +RV+ E A G GM GQ +D++ +
Sbjct: 121 LLNYAFETAVKAFVLEPEDSLTIGNAIRVLGEKA---GIYGMLGGQVIDVKETGHAVSKD 177
Query: 207 LVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT- 265
+++ + E K G + E + + G L GA +E++++ R VG+ +QV DDIL+ +
Sbjct: 178 VLDTIYELKTGALIEAAMMIGAILGGASKEEVKTVERIASLVGLAFQVQDDILDVTSTQE 237
Query: 266 ----PRDEEKKKKKGKSYVAFYGVEKAMEVAEE 294
P ++K +K +YV G++ A +V EE
Sbjct: 238 ELGKPIHSDEKNEK-TTYVTLLGIDDAKKVVEE 269
>gi|304322149|ref|YP_003855792.1| geranyltranstransferase (farnesyl-diphosphate synthase)
[Parvularcula bermudensis HTCC2503]
gi|303301051|gb|ADM10650.1| putative geranyltranstransferase (farnesyl-diphosphate synthase)
[Parvularcula bermudensis HTCC2503]
Length = 296
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 122/232 (52%), Gaps = 12/232 (5%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPE-----QIYESMRYSVLAKGTKRAPPVMCVAACEL 96
L Y T + ++LE + + E ++ +M + L G KR P + + A +
Sbjct: 5 LSDYLITRANLVTKSLENRLVINRTESPALGRLRAAMAHGALGGG-KRLRPFLVLEAASI 63
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
FG + AA P A A+EMVH SLIHDDLP MDD +RRG+PS H Y IAILAGD L
Sbjct: 64 FGADDEAALPAATAIEMVHCYSLIHDDLPAMDDADTRRGRPSVHKAYDEAIAILAGDGLL 123
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL---EGEPNLVEFVQE 213
F + T P R++ E+A A GS GM GQ +DL G+ + +Q
Sbjct: 124 TDAFALL---TEEGTYTAPTACRLVRELALAAGSGGMVGGQMMDLYPDGGDEAAIVGIQR 180
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT 265
+K G + E +AV G + A + +LR+Y AVG +QVVDDIL+ A +
Sbjct: 181 RKTGALIEAAAVMGAIVGAAAPSDEAALRQYAAAVGEAFQVVDDILDETASS 232
>gi|420247661|ref|ZP_14751056.1| geranylgeranyl pyrophosphate synthase [Burkholderia sp. BT03]
gi|398070555|gb|EJL61849.1| geranylgeranyl pyrophosphate synthase [Burkholderia sp. BT03]
Length = 293
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/267 (38%), Positives = 141/267 (52%), Gaps = 19/267 (7%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P +++E+MRY+VL G KR P++C AA EL G + ALEM+H SL+HDD+P
Sbjct: 29 PARLHEAMRYAVLGGG-KRVRPLLCHAAGELTGAKAECLDAASAALEMIHVYSLVHDDMP 87
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GDAL F V+ T L P + ++ E+A
Sbjct: 88 CMDDDELRRGKPTVHVKYDEATALLVGDALQSQAF---VALTSDVLAPAQQA-ALVRELA 143
Query: 186 RAVGSTGMAAGQFLDLEG------EPNLVEFVQEKKFGEMSECSAVCGGFLAGA--DDDE 237
A GS GMA GQ +DL P L E + K G + +AV G L G D
Sbjct: 144 LASGSIGMAGGQAIDLASVGHTLTRPQL-ETMHRLKTGALLR-AAVRMGALTGETPDAKA 201
Query: 238 IQSLRRYGRAVGVLYQVVDDILEA---KAQTPRDEEKKKKKGK-SYVAFYGVEKAMEVAE 293
+QSL Y AVG+ +QVVDDIL+ A + K K GK +YV+ G++ + +A
Sbjct: 202 LQSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGKDAKDGKPTYVSIIGLDASRALAA 261
Query: 294 ELRAKAKEELDRFKKYGDNVLPLYSFI 320
+LR+ A + L F + L +
Sbjct: 262 QLRSDAHQALAPFGARAQRLAELADLV 288
>gi|53716444|ref|YP_105136.1| geranyltranstransferase [Burkholderia mallei ATCC 23344]
gi|67643212|ref|ZP_00441960.1| geranyltranstransferase [Burkholderia mallei GB8 horse 4]
gi|121597567|ref|YP_991106.1| geranyltranstransferase [Burkholderia mallei SAVP1]
gi|124382622|ref|YP_001025504.1| geranyltranstransferase [Burkholderia mallei NCTC 10229]
gi|126446017|ref|YP_001077567.1| geranyltranstransferase [Burkholderia mallei NCTC 10247]
gi|167000281|ref|ZP_02266100.1| geranyltranstransferase [Burkholderia mallei PRL-20]
gi|254177164|ref|ZP_04883820.1| geranyltranstransferase [Burkholderia mallei ATCC 10399]
gi|254203074|ref|ZP_04909436.1| geranyltranstransferase [Burkholderia mallei FMH]
gi|254208407|ref|ZP_04914756.1| geranyltranstransferase [Burkholderia mallei JHU]
gi|254359405|ref|ZP_04975677.1| geranyltranstransferase [Burkholderia mallei 2002721280]
gi|52422414|gb|AAU45984.1| geranyltranstransferase [Burkholderia mallei ATCC 23344]
gi|121225365|gb|ABM48896.1| geranyltranstransferase [Burkholderia mallei SAVP1]
gi|126238871|gb|ABO01983.1| geranyltranstransferase [Burkholderia mallei NCTC 10247]
gi|147746119|gb|EDK53197.1| geranyltranstransferase [Burkholderia mallei FMH]
gi|147751094|gb|EDK58162.1| geranyltranstransferase [Burkholderia mallei JHU]
gi|148028592|gb|EDK86552.1| geranyltranstransferase [Burkholderia mallei 2002721280]
gi|160698204|gb|EDP88174.1| geranyltranstransferase [Burkholderia mallei ATCC 10399]
gi|238524497|gb|EEP87930.1| geranyltranstransferase [Burkholderia mallei GB8 horse 4]
gi|243063768|gb|EES45954.1| geranyltranstransferase [Burkholderia mallei PRL-20]
gi|261826895|gb|ABN00184.2| geranyltranstransferase [Burkholderia mallei NCTC 10229]
Length = 294
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/269 (37%), Positives = 141/269 (52%), Gaps = 22/269 (8%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P Q++E+MRY+VL G KR P++C AA EL G + A + ALEM+H SL+HDD+P
Sbjct: 29 PAQLHEAMRYAVLGGG-KRVRPLLCHAAGELTGASEAARDAASAALEMIHVYSLVHDDMP 87
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GDAL F V+ T +P R ++ E+A
Sbjct: 88 CMDDDALRRGKPTVHVKYDEPTALLVGDALQSQAF---VALTDAAALPADRQAALVRELA 144
Query: 186 RAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAGA--DDDEI 238
A GS GMA GQ +DL + +E + K G + S V G LAG D +
Sbjct: 145 LASGSIGMAGGQAIDLASVGVALTRDALEKMHRMKTGALLRAS-VRMGALAGETPSGDAM 203
Query: 239 QSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEV 291
++L Y AVG+ +QVVDDIL+ T K GK +YV+ G++ + +
Sbjct: 204 RALDAYAAAVGLAFQVVDDILDV---TTDSATLGKTAGKDAANDKPTYVSIIGLDASRAL 260
Query: 292 AEELRAKAKEELDRFKKYGDNVLPLYSFI 320
A +LRA A L+ F + L +
Sbjct: 261 AAQLRADAHAALEPFGARAQRLAELADLV 289
>gi|306820732|ref|ZP_07454359.1| geranyltranstransferase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304551231|gb|EFM39195.1| geranyltranstransferase [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 295
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 154/303 (50%), Gaps = 24/303 (7%)
Query: 41 DLKTYWTTLITEIDQNLEKAITVK--YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
D+KT ++++++K + +K Y ++I ESM YS+L G KR PV+ + +LF
Sbjct: 2 DIKTIMQDDKEIVERHIKKIMDIKLGYSQKIIESMSYSLLG-GGKRLRPVLFIETLKLFD 60
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
++ AC LEM+H SLIHDDLP MD+D RRG+P+NH VYG D+AILAGD+L L
Sbjct: 61 IDFEQYLNIACVLEMIHTYSLIHDDLPAMDNDDLRRGKPTNHIVYGEDVAILAGDSLLNL 120
Query: 159 G----FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVE----- 209
F + ++ P+ + R+ I++ G GM GQ D+ E ++
Sbjct: 121 SYEVLFDFLYKNSSPNNILACRL------ISKNAGIFGMIGGQVSDVINENKEIDIENLK 174
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEA---KAQTP 266
++ K ++ S + +++ + I L Y +G+ +Q+ DDIL+ K
Sbjct: 175 YIHYNKTAKLIMASILSAAYISDCSKEYITYLESYAYNIGMAFQISDDILDVVGDKEIVG 234
Query: 267 RDEEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAAD 325
+ K ++ GK +Y ++G+E++ + AK E+ + N+ DY +
Sbjct: 235 KSIGKDEQYGKNTYPKYFGLEESKIKLKNYIDNAKREISKID--SKNIEFFVELADYVGN 292
Query: 326 REF 328
R F
Sbjct: 293 RNF 295
>gi|452974989|gb|EME74808.1| (2E,6E)-farnesyl diphosphate synthase IspA [Bacillus sonorensis
L12]
Length = 296
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 154/296 (52%), Gaps = 15/296 (5%)
Query: 42 LKTYWTTLITEIDQNLEKAIT-VKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVN 100
L + T I+Q L I ++ P + +SM YS+ A G KR P++ +A +G
Sbjct: 5 LDEFLNTRKALIEQRLPLYIQKLQAPSTLKQSMLYSLEA-GGKRLRPILVLALLHAYGKK 63
Query: 101 RIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGF 160
P CA+EM+H SLIHDDLPCMDDD RRG+P+NH +YG A+LAGDAL F
Sbjct: 64 EEDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKIYGEATAVLAGDALLTESF 123
Query: 161 QHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----VQEKK 215
+ I +H VP + LR++ E+ A G+ GM GQ LD+E E V + E K
Sbjct: 124 KMITTHVSAE-VPAEKRLRLVNELISAAGAEGMVGGQILDMEAESKPVSLQELQSIHEGK 182
Query: 216 FGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK---K 272
++ S + G LA A ++EI+ LR + +G+ +Q+ DDIL+ + + ++
Sbjct: 183 TAKLLSFSVIAGAILADAPEEEIEKLREFSHHIGIGFQIRDDILDLEGSEDKIGKRIGSD 242
Query: 273 KKKGKS-YVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
GKS Y + +E A + +E KAK+ + D LY D ADR+
Sbjct: 243 TSNGKSTYPSLLSLEGAKQKLDEHIKKAKQLISELSLEQD---LLYELCDMIADRD 295
>gi|184155736|ref|YP_001844076.1| geranyltranstransferase [Lactobacillus fermentum IFO 3956]
gi|227515672|ref|ZP_03945721.1| geranyltranstransferase [Lactobacillus fermentum ATCC 14931]
gi|260663547|ref|ZP_05864437.1| geranyltranstransferase [Lactobacillus fermentum 28-3-CHN]
gi|183227080|dbj|BAG27596.1| geranyltranstransferase [Lactobacillus fermentum IFO 3956]
gi|227085975|gb|EEI21287.1| geranyltranstransferase [Lactobacillus fermentum ATCC 14931]
gi|260552088|gb|EEX25141.1| geranyltranstransferase [Lactobacillus fermentum 28-3-CHN]
Length = 291
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 132/265 (49%), Gaps = 20/265 (7%)
Query: 71 ESMRYSVLAKGTKRAPPVMCVAACELFGVN-RIAAFPTACALEMVHAASLIHDDLPCMDD 129
+SM YS+LA G KR P + +A EL G ACALE++H SLIHDDLP MD+
Sbjct: 31 KSMAYSLLAGG-KRLRPTLTIAVAELLGKTIDDDLVRAACALELIHTYSLIHDDLPAMDN 89
Query: 130 DPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVG 189
D RRG+P+NH VYG +A LAGD L L F+ + + + P LR++ E+A+A G
Sbjct: 90 DDLRRGKPTNHRVYGPGVATLAGDGLLTLAFEWVSDNQ----LKAPVRLRLVQELAKAAG 145
Query: 190 STGMAAGQFLDLEGEPNLVEFVQEKKF-----GEMSECSAVCGGFLAGADDDEIQSLRRY 244
GM AGQ D+ + Q KK G + + + GG +A + + L +
Sbjct: 146 PAGMVAGQATDVSATGQELSLAQLKKLHRQKTGALLRYAVLAGGLIAEQETAVLDCLTTF 205
Query: 245 GRAVGVLYQVVDDILEAKAQTP-------RDEEKKKKKGKSYVAFYGVEKAMEVAEELRA 297
G A G+ +Q+ DDIL+ A T +D+ ++K + G + +E A
Sbjct: 206 GEAYGLAFQIYDDILDVTATTAEMGKATHKDQAEQKNTYPGLLGLAGAKGELEAALTTAR 265
Query: 298 KAKEELDRFKKYGDNVLPLYSFIDY 322
A EL R G + L F+ Y
Sbjct: 266 GAAAELGRLT--GKETVILDDFLAY 288
>gi|87307782|ref|ZP_01089925.1| geranylgeranyl pyrophosphate synthetase (precursor)
[Blastopirellula marina DSM 3645]
gi|87289396|gb|EAQ81287.1| geranylgeranyl pyrophosphate synthetase (precursor)
[Blastopirellula marina DSM 3645]
Length = 298
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/290 (36%), Positives = 158/290 (54%), Gaps = 16/290 (5%)
Query: 42 LKTYWTTLITEIDQ--NLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
L Y TL E+DQ N+ + P+++ E++RYS+LA G KR P++ + A E G
Sbjct: 9 LHEYSDTLRDEVDQALNVYSSFGEGCPDRLQEAIRYSLLAPG-KRLRPLLTLMAAETCGS 67
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+R A P+ACA+EM+HA SLIHDDLP MDDD RRG+P+ H + AILAGDAL
Sbjct: 68 DRTQAMPSACAVEMIHAYSLIHDDLPAMDDDDLRRGRPTCHKAFDEATAILAGDALLARA 127
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLE-----GEPNLVEFVQEK 214
+ + LV R E+A+A G+T + GQ DL G+ +++ + +
Sbjct: 128 LEIVADGYQDPLVAA----RSCRELAKAAGATALVGGQADDLNEQFGSGDVEMLKAIHRR 183
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILE---AKAQTPRDEEK 271
K G M S G AGADD ++ L YG +G+ +Q+VDD+L+ +A + K
Sbjct: 184 KTGAMICVSLRLGAIAAGADDQQVAQLNLYGEQIGLAFQIVDDLLDYAGDEAALGKRVGK 243
Query: 272 KKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
++GK +Y GV ++ AE L A AK+ L F + +++ L +I
Sbjct: 244 DAERGKLTYPGLIGVAESRRQAESLIAGAKQSLADFGERANHLEALAQYI 293
>gi|301063042|ref|ZP_07203607.1| putative geranyltranstransferase [delta proteobacterium NaphS2]
gi|300442923|gb|EFK07123.1| putative geranyltranstransferase [delta proteobacterium NaphS2]
Length = 302
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/306 (35%), Positives = 158/306 (51%), Gaps = 29/306 (9%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPE------QIYESMRYSVLAKGTKRAPPVMCVAA 93
FDLK Y ++D L++ +P+ + ++MRYS+ A G KR P++C+A
Sbjct: 7 FDLKVYLEEKRVQVDAALDE----YFPKGDGLTTALIKAMRYSLFA-GGKRLRPILCIAG 61
Query: 94 CELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGD 153
E G P ACA+E++H SLIHDDLP MDDD RRG+P+NH V+G IA+LAGD
Sbjct: 62 AEAVGGVGQRVLPVACAVELIHTYSLIHDDLPVMDDDDLRRGKPTNHKVFGEAIALLAGD 121
Query: 154 ALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EG---EPNLV 208
L F + S + P +L VI IA A G GM GQ +D+ EG E V
Sbjct: 122 GLLTEAFSLMTSPKATENIEPPGLLEVIQIIAVAAGCEGMVGGQVVDILWEGKNAEFETV 181
Query: 209 EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP-- 266
+F+ K G M S + G AGA + +Q YG +G+ +Q+ DDIL+ + +
Sbjct: 182 KFLHTHKTGAMIRASVMSGAIAAGARESVVQHFSSYGHKIGLAFQISDDILDVEGDSEIM 241
Query: 267 -----RDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFID 321
DE K K +Y + G++++ ++ E L A ++L+ F GD PL
Sbjct: 242 GKMAGADEGKGK---TTYPSVLGMDESKKIQEALVRDAVQDLEVF---GDAAEPLRKIAY 295
Query: 322 YAADRE 327
Y +R+
Sbjct: 296 YIIERK 301
>gi|390577032|ref|ZP_10257072.1| polyprenyl synthetase [Burkholderia terrae BS001]
gi|389931010|gb|EIM93098.1| polyprenyl synthetase [Burkholderia terrae BS001]
Length = 297
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/270 (36%), Positives = 138/270 (51%), Gaps = 21/270 (7%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P +++E+MRY+VL G KR P++C AA EL G + ALEM+H SL+HDD+P
Sbjct: 29 PARLHEAMRYAVLGGG-KRVRPLLCHAAGELTGAKAECLDAASAALEMIHVYSLVHDDMP 87
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GDAL F V+ T L P + ++ E+A
Sbjct: 88 CMDDDELRRGKPTVHVKYDEATALLVGDALQSQAF---VALTSDVLAPAQQA-ALVRELA 143
Query: 186 RAVGSTGMAAGQFLDLEG------EPNLVEFVQEKKFGEMSECSAVCGGFL-----AGAD 234
A GS GMA GQ +DL P L E + K G + + G G D
Sbjct: 144 LASGSIGMAGGQAIDLASVGHTLTRPQL-ETMHRLKTGALLRAAVRMGALTGQIENGGPD 202
Query: 235 DDEIQSLRRYGRAVGVLYQVVDDILEA---KAQTPRDEEKKKKKGK-SYVAFYGVEKAME 290
+QSL Y AVG+ +QVVDDIL+ A + K K GK +YV+ G++ +
Sbjct: 203 AKALQSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGKDAKDGKPTYVSIIGLDASRA 262
Query: 291 VAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+A +LR+ A + L F + L +
Sbjct: 263 LAAQLRSDAHQALAPFGARAQRLAELADLV 292
>gi|445063263|ref|ZP_21375494.1| geranylgeranyl pyrophosphate synthase [Brachyspira hampsonii 30599]
gi|444505355|gb|ELV05886.1| geranylgeranyl pyrophosphate synthase [Brachyspira hampsonii 30599]
Length = 294
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 156/280 (55%), Gaps = 18/280 (6%)
Query: 40 FDLKTYWTTLITEIDQNLEKAI---TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
+LK Y + EI++ ++ +++ E ++Y + A G KR P++ ACE+
Sbjct: 1 MNLKEYMNVRLEEINKTIDNVFDKSSIELENSFIEMLKYPLDA-GGKRLRPILTCLACEI 59
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
F + + A ALE++H SL+HDDLP MD+D RRG+P+ H YG AIL GD L
Sbjct: 60 FEGDYKKSIIPAVALELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGLL 119
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL---EGEPN--LVEFV 211
FQ ++S V + + +++ E++ A G GM GQF+DL E E N +++ +
Sbjct: 120 THAFQ-LLSKAD---VKDSTLRKLLFELSYAAGINGMVMGQFIDLYYEEKEINFDMLKIL 175
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP---RD 268
KK G M AV G ++ +D++I+++ +Y AVG+ +Q+ DDIL+ + +
Sbjct: 176 HAKKTGAMIR-GAVRLGAISSENDNDIENITKYAEAVGLAFQIQDDILDVISDNETLGKT 234
Query: 269 EEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFK 307
K +K+GK +YV +G+E A + A+++ KA E L +K
Sbjct: 235 VGKDEKEGKLTYVKQFGLEGAKKEAKKVTEKAIEYLKPYK 274
>gi|372490114|ref|YP_005029679.1| geranylgeranyl pyrophosphate synthase [Dechlorosoma suillum PS]
gi|359356667|gb|AEV27838.1| geranylgeranyl pyrophosphate synthase [Dechlorosoma suillum PS]
Length = 302
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/281 (36%), Positives = 147/281 (52%), Gaps = 33/281 (11%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P+ ++++MRYS L G KR P++ AA EL G A ACA+EM+H SL+HDDLP
Sbjct: 37 PQGLHDAMRYSALGGG-KRVRPLLAFAAGELCGATAEALDCVACAVEMIHVYSLVHDDLP 95
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEP-RVLRVIAEI 184
CMDDD RRG+P+ H Y A+L GDAL F+ I++ P P P + L ++ +
Sbjct: 96 CMDDDVLRRGRPTCHVQYDEPTALLVGDALQSRAFE-ILAAQP---WPSPAQGLELVRLL 151
Query: 185 ARAVGSTGMAAGQFLDLEG------EPNLVEFVQEKKFGEMSECS----AVCGGFLAGAD 234
A GS GMA GQ +DL +P L E + K G + + A CG LA A
Sbjct: 152 AHGSGSCGMAGGQAIDLASVGKSLDQPQL-ELMHALKTGALIRAAVLMGAHCGTPLAAA- 209
Query: 235 DDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP-------RDEEKKKKKGKSYVAFYGVEK 287
E++ L + + G+L+QVVDDIL+ A T +DE K +YV G+E
Sbjct: 210 --ELERLDAFAKRAGLLFQVVDDILDCTASTATLGKTAGKDEAADK---PTYVRLLGLET 264
Query: 288 AMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
A ++A++LR ++ L + +G L Y R+F
Sbjct: 265 ARQLADDLR---RDALGALEGFGPRARRLIELAHYITTRKF 302
>gi|323693774|ref|ZP_08107969.1| geranyltranstransferase [Clostridium symbiosum WAL-14673]
gi|323502160|gb|EGB18027.1| geranyltranstransferase [Clostridium symbiosum WAL-14673]
Length = 294
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 131/245 (53%), Gaps = 13/245 (5%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
+ + I+E+M YSV A G KR P++ LFG P A+EM+H +SLIHDDL
Sbjct: 27 HQKTIFEAMNYSVKAGG-KRLRPLLMREVYRLFGGTGKEIEPFMAAIEMIHTSSLIHDDL 85
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
PCMD+D RRG+ + VYG D+A+LAGDAL + + RV + I +
Sbjct: 86 PCMDNDEYRRGKKTTWVVYGYDMAVLAGDALLIYAIE-TAARAFQMTDNSQRVGKCIGIL 144
Query: 185 ARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A+ G GM GQ +D+E L+ +F+ K G + E + V G +AGA D+E +
Sbjct: 145 AQKTGIYGMIGGQTVDVELTDKLIPKDKLDFIYRLKTGALLEAAMVIGAVMAGASDEECE 204
Query: 240 SLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYVAFYGVEKAMEVAEE 294
++ R A+G+ +Q+ DDIL+ + P ++K K +YV+ G+EKA E+
Sbjct: 205 TVERMAAAIGLAFQIQDDILDVTSSQEVLGKPVLSDEKNNK-TTYVSLEGIEKAKRDVEK 263
Query: 295 LRAKA 299
L A
Sbjct: 264 LSETA 268
>gi|381402160|ref|ZP_09927038.1| geranyltranstransferase [Kingella kingae PYKK081]
gi|380832848|gb|EIC12738.1| geranyltranstransferase [Kingella kingae PYKK081]
Length = 295
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 151/292 (51%), Gaps = 16/292 (5%)
Query: 41 DLKTYWTTLITEIDQNLEKAITVKY--PEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
DLK + + + ++ L+ + + P+ ++E+MRYS L G KR P++ +AA EL
Sbjct: 3 DLKVWQNQAVEQAERILQTVLPISQVAPQTLHEAMRYSTL-DGGKRLRPLLVLAASELGN 61
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
+ A A+E +H SL+HDD+P MD+D RRG+P+ H +G A+L GDAL L
Sbjct: 62 QVQAACEAAMAAVECIHVYSLVHDDMPVMDNDSLRRGKPTCHVQFGEATALLVGDALQTL 121
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG-----EPNLVEFVQE 213
F + + T + R LR++ +A+A GS GMA GQ +DL +EF+
Sbjct: 122 AFDILSTETE---LSTARQLRMVKVLAQASGSLGMAGGQAVDLGNVGRDLSQTELEFMHS 178
Query: 214 KKFGEMSECSAVCGGFLA-GADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKK 272
K G + + GG +D+++ L Y +G+ +QV+DD+L+ +A T +
Sbjct: 179 LKTGALIRAAVALGGLSCPDLNDEQLAHLDVYASKLGLAFQVIDDVLDCEADTATLGKTA 238
Query: 273 KKKGK----SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
K +YV G++ A AE+L A+A + L F D++ L F+
Sbjct: 239 GKDADANKPTYVKLMGLQAARAYAEQLVAQAIDALQTFDTRADHLRTLAQFV 290
>gi|219669510|ref|YP_002459945.1| polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
gi|219539770|gb|ACL21509.1| Polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
Length = 290
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/270 (37%), Positives = 144/270 (53%), Gaps = 17/270 (6%)
Query: 69 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMD 128
+ ESM YS L+ G KR PV+ +AA G + P CALE++H SLIHDDLP MD
Sbjct: 28 LAESMNYS-LSAGGKRIRPVLALAAAHAVGGDCEDILPAVCALELIHTYSLIHDDLPAMD 86
Query: 129 DDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAV 188
+D RRG+ +NH V+G AILAGDAL F+ + P V R LR + E+A+A
Sbjct: 87 NDDYRRGRLANHKVFGEGQAILAGDALLTYAFELLAQ--PMSGVDSQRQLRAVREVAQAA 144
Query: 189 GSTGMAAGQFLDLEGEP---NLVEF--VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRR 243
G GM GQ LDLE E NL E V K G + +A G LAG +++I++L
Sbjct: 145 GPEGMVGGQMLDLEAEEKQLNLAELEQVHRLKTGAILVVAARLGAILAGGTEEKIEALTS 204
Query: 244 YGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAK 298
Y +A+G+ +Q+ DDIL+ ++ + P + ++ K +Y + G+ A EL+ K
Sbjct: 205 YAQAIGLAFQIKDDILDLESDSETLGKPVHSDLRQHK-STYPSLMGLAGA---KLELKIK 260
Query: 299 AKEELDRFKKYGDNVLPLYSFIDYAADREF 328
E G+ L+ DY A R++
Sbjct: 261 TDEAHAALAVLGERAGFLHELADYIAQRKY 290
>gi|189485328|ref|YP_001956269.1| geranyltranstransferase [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|170287287|dbj|BAG13808.1| geranyltranstransferase [uncultured Termite group 1 bacterium
phylotype Rs-D17]
Length = 297
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 149/306 (48%), Gaps = 27/306 (8%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
D K Y + I+ L+K + K + + MRYSVLA G KR PV+ + A ELFG
Sbjct: 3 NIDFKKYILQKVEYINLVLKKFLP-KDNSVVSQGMRYSVLA-GGKRLRPVLVILAAELFG 60
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
V P ACA+E +H SLIHDDLP MD+D RRG +NH +G AIL GDAL
Sbjct: 61 VKAENVIPAACAIEYLHTYSLIHDDLPAMDNDDLRRGISANHKKFGEAAAILCGDALLTE 120
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLD-------------LEGEP 205
F I E + + +A G GM AGQ D L GE
Sbjct: 121 SFSLITKSKS----SEKNINEAVRILAYYGGYKGMIAGQTEDILETGKWSKKNKILLGEK 176
Query: 206 NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILE--AKA 263
++F+Q +K + S G LAGAD + +++L YG+ G+ +Q+VDDIL+ A
Sbjct: 177 --IKFIQIQKTAALMIASLKIGAVLAGADKEGLKALEVYGKNAGIAFQIVDDILDVYADK 234
Query: 264 QTPRDEEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
+ E + GK + ++ G +A + A E KAK+ + F G+ +DY
Sbjct: 235 KLLGKEGSDAENGKLTVLSLCGKREAEKKAYEHIKKAKKAVSVF---GNKSEIFVYLLDY 291
Query: 323 AADREF 328
ADR +
Sbjct: 292 IADRTY 297
>gi|333376484|ref|ZP_08468260.1| geranyltranstransferase [Kingella kingae ATCC 23330]
gi|332967867|gb|EGK06963.1| geranyltranstransferase [Kingella kingae ATCC 23330]
Length = 295
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 151/292 (51%), Gaps = 16/292 (5%)
Query: 41 DLKTYWTTLITEIDQNLEKAITVKY--PEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
DLK + + + ++ L+ + + P+ ++E+MRYS L G KR P++ +AA EL
Sbjct: 3 DLKVWQNQAVEQAERILQTVLPISQVAPQTLHEAMRYSTL-DGGKRLRPLLVLAASELGN 61
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
+ A A+E +H SL+HDD+P MD+D RRG+P+ H +G A+L GDAL L
Sbjct: 62 QVQAACEAAMAAVECIHVYSLVHDDMPAMDNDSLRRGKPTCHVQFGEATALLVGDALQTL 121
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG-----EPNLVEFVQE 213
F + + T V R LR++ +A+A GS GMA GQ +DL +EF+
Sbjct: 122 AFDILSTETELSTV---RQLRMVKVLAQASGSLGMAGGQAVDLGNVGRDLSQTELEFMHS 178
Query: 214 KKFGEMSECSAVCGGFLA-GADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKK 272
K G + + GG +D+++ L Y +G+ +QV+DD+L+ +A T +
Sbjct: 179 LKTGALIRAAVALGGLSCPDLNDEQLAHLDVYASKLGLAFQVIDDVLDCEADTATLGKTA 238
Query: 273 KKKGK----SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
K +YV G++ A AE+L A+A + L F D++ L F+
Sbjct: 239 GKDADANKPTYVKLMGLQAARAYAEQLVAQAIDALQTFDTRADHLRTLAQFV 290
>gi|229019397|ref|ZP_04176220.1| Geranyltranstransferase [Bacillus cereus AH1273]
gi|229025640|ref|ZP_04182046.1| Geranyltranstransferase [Bacillus cereus AH1272]
gi|228735638|gb|EEL86227.1| Geranyltranstransferase [Bacillus cereus AH1272]
gi|228741867|gb|EEL92044.1| Geranyltranstransferase [Bacillus cereus AH1273]
Length = 297
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 151/267 (56%), Gaps = 17/267 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + E+M YS+ A G KR P++ A + FG + ACALEM+H SLIHDDLP
Sbjct: 31 PNVLREAMAYSLEA-GGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLIHDDLP 89
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH V+G +A+LAGD L FQ I+++ + E +V R++ E+A
Sbjct: 90 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMTYEQKEISAEKKV-RLVLELA 148
Query: 186 RAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM AGQ D+E E N +E++ + K G++ E + + G L+ A +++ +
Sbjct: 149 KAAGPEGMVAGQVADMEAEGKRLTINELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEK 208
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVAE 293
L + + +G+ +Q+ DDIL+ + +EE K G +Y + V++A + E
Sbjct: 209 LLAFAKYIGLAFQIRDDILDVEGT---EEEIGKPIGSDASNEKSTYTTLFTVDRAKSILE 265
Query: 294 ELRAKAKEELDRFKKYGDNVLPLYSFI 320
E AKAK+ + + + +L + I
Sbjct: 266 ETIAKAKDSISSLQLQDEYLLSICDLI 292
>gi|163941936|ref|YP_001646820.1| polyprenyl synthetase [Bacillus weihenstephanensis KBAB4]
gi|229135000|ref|ZP_04263806.1| Geranyltranstransferase [Bacillus cereus BDRD-ST196]
gi|229168922|ref|ZP_04296639.1| Geranyltranstransferase [Bacillus cereus AH621]
gi|423368233|ref|ZP_17345665.1| hypothetical protein IC3_03334 [Bacillus cereus VD142]
gi|423512293|ref|ZP_17488824.1| hypothetical protein IG3_03790 [Bacillus cereus HuA2-1]
gi|423518883|ref|ZP_17495364.1| hypothetical protein IG7_03953 [Bacillus cereus HuA2-4]
gi|423591823|ref|ZP_17567854.1| hypothetical protein IIG_00691 [Bacillus cereus VD048]
gi|423660971|ref|ZP_17636140.1| hypothetical protein IKM_01368 [Bacillus cereus VDM022]
gi|423669765|ref|ZP_17644794.1| hypothetical protein IKO_03462 [Bacillus cereus VDM034]
gi|163864133|gb|ABY45192.1| Polyprenyl synthetase [Bacillus weihenstephanensis KBAB4]
gi|228614514|gb|EEK71622.1| Geranyltranstransferase [Bacillus cereus AH621]
gi|228648502|gb|EEL04531.1| Geranyltranstransferase [Bacillus cereus BDRD-ST196]
gi|401080984|gb|EJP89264.1| hypothetical protein IC3_03334 [Bacillus cereus VD142]
gi|401159938|gb|EJQ67317.1| hypothetical protein IG7_03953 [Bacillus cereus HuA2-4]
gi|401231956|gb|EJR38458.1| hypothetical protein IIG_00691 [Bacillus cereus VD048]
gi|401298892|gb|EJS04492.1| hypothetical protein IKO_03462 [Bacillus cereus VDM034]
gi|401301012|gb|EJS06601.1| hypothetical protein IKM_01368 [Bacillus cereus VDM022]
gi|402449264|gb|EJV81101.1| hypothetical protein IG3_03790 [Bacillus cereus HuA2-1]
Length = 297
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 149/267 (55%), Gaps = 17/267 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + E+M YS L G KR P++ A + FG R ACALEM+H SLIHDDLP
Sbjct: 31 PNVLREAMAYS-LEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDDLP 89
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH V+G +A+LAGD L FQ I+++ + E +V R++ E+A
Sbjct: 90 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKV-RLVLELA 148
Query: 186 RAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM AGQ D+E E N +E++ K G++ E + + G L+ A +++ +
Sbjct: 149 KAAGPEGMVAGQVADMEAEGKRLTINELEYIHNHKTGKLLEFAVLAGAILSDATEEQEEK 208
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVAE 293
L + + +G+ +Q+ DDIL+ + +EE K G +Y + V++A + E
Sbjct: 209 LLAFAKYIGLAFQIRDDILDVEGT---EEEIGKPIGSDASNEKSTYTTLFTVDRAKSILE 265
Query: 294 ELRAKAKEELDRFKKYGDNVLPLYSFI 320
E AKAK+ + + + +L + I
Sbjct: 266 EKIAKAKDSISSLQLQDEYLLSICDLI 292
>gi|423417897|ref|ZP_17394986.1| hypothetical protein IE3_01369 [Bacillus cereus BAG3X2-1]
gi|401107068|gb|EJQ15025.1| hypothetical protein IE3_01369 [Bacillus cereus BAG3X2-1]
Length = 297
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 150/267 (56%), Gaps = 17/267 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + E+M YS L G KR P++ A + FG + ACALEM+H SLIHDDLP
Sbjct: 31 PNVLREAMAYS-LEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLIHDDLP 89
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH V+G +A+LAGD L FQ I+++ + E +V R++ E+A
Sbjct: 90 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKV-RLVLELA 148
Query: 186 RAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM AGQ D+E E N +E++ + K G++ E + + G L+ A +++ +
Sbjct: 149 KAAGPEGMVAGQVADMEAEGKRLTINELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEK 208
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVAE 293
L + + +G+ +Q+ DDIL+ + +EE K G +Y + V++A + E
Sbjct: 209 LLAFAKYIGLAFQIRDDILDVEGT---EEEIGKPIGSDASNEKSTYTTLFTVDRAKSILE 265
Query: 294 ELRAKAKEELDRFKKYGDNVLPLYSFI 320
E AKAK+ + + + +L + I
Sbjct: 266 ETIAKAKDSISSLQLQDEYLLSICDLI 292
>gi|433444536|ref|ZP_20409408.1| polyprenyl synthetase [Anoxybacillus flavithermus TNO-09.006]
gi|432001564|gb|ELK22439.1| polyprenyl synthetase [Anoxybacillus flavithermus TNO-09.006]
Length = 290
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 127/230 (55%), Gaps = 14/230 (6%)
Query: 52 EIDQNLEKAI-TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACA 110
+I+Q L I +++ P+ I E+M YS+ A G KR P++ ++ F ACA
Sbjct: 11 QIEQQLPTYIESLQAPQTIKEAMLYSLRA-GGKRIRPLLLLSTLHAFRKPIGIGMSVACA 69
Query: 111 LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPH 170
LEM+H SLIHDDLP MD+D RRG+P+NH V+G AILAGDAL FQ +
Sbjct: 70 LEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEANAILAGDALLTYAFQVVADDKT-- 127
Query: 171 LVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAV 225
+ +R+I+E+A+A G GM GQ DLEGE + E++ K G++ + S
Sbjct: 128 -ISSDVKVRLISELAKAAGPEGMVGGQVADLEGEGKTISLQQLEYIHRHKTGKLLQYSVR 186
Query: 226 CGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKK 275
G L A + ++ L + +G+ +Q+ DDIL+ + DE+K KK
Sbjct: 187 AGAILGEATEQQLTLLTLFADHLGLAFQIRDDILDIEG----DEQKIGKK 232
>gi|227499080|ref|ZP_03929217.1| polyprenyl synthetase [Acidaminococcus sp. D21]
gi|352684487|ref|YP_004896472.1| polyprenyl synthetase [Acidaminococcus intestini RyC-MR95]
gi|226904529|gb|EEH90447.1| polyprenyl synthetase [Acidaminococcus sp. D21]
gi|350279142|gb|AEQ22332.1| polyprenyl synthetase [Acidaminococcus intestini RyC-MR95]
Length = 292
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 99/299 (33%), Positives = 149/299 (49%), Gaps = 22/299 (7%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
DL TY +D L+ I V ++ E+M YS LA G KR P++ +AA + G
Sbjct: 2 MDLSTYLKERSELVDGFLKIRIGVGAISRVDEAMAYSALA-GGKRLRPILLMAAADAVGG 60
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
P A ALEM+H SLIHDDLP MD+D RRG+ +NH V+G +A+LAGD L
Sbjct: 61 KGTDFLPLASALEMIHTYSLIHDDLPEMDNDDYRRGRLTNHKVFGQAMAVLAGDGLLTQA 120
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG-----EPNLVEFVQEK 214
F+ + T V ++ +I IAR G GM GQ LD+ EP ++ + E
Sbjct: 121 FEVM---TEQKGVDPALMVEIIHLIARCAGPEGMVGGQALDINAEEKHLEPAEMKQLHEA 177
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP-------R 267
K G + + G L G DE+ +L ++ G+ +Q+ DDIL+ + +
Sbjct: 178 KTGALFIAAIRSGALLGGGSKDEVNALTKFATFFGLAFQITDDILDVEGDSKIMGKMAGM 237
Query: 268 DEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
DE+ K +YV+ + +E A +A + KA+ L+ F G+ PL + + +R
Sbjct: 238 DEKMHK---STYVSLFTLEGAKAMALDTLKKAELTLEPF---GERAEPLLAIARHLYNR 290
>gi|297616623|ref|YP_003701782.1| polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680]
gi|297144460|gb|ADI01217.1| Polyprenyl synthetase [Syntrophothermus lipocalidus DSM 12680]
Length = 301
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/266 (38%), Positives = 151/266 (56%), Gaps = 16/266 (6%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
YP+ I+ +M Y+V G KR P++ + + ++ G + A P ACA+EM+H+ SL+HDDL
Sbjct: 33 YPQVIHRAMHYAVF-NGGKRLRPILVLESAQVVGKDLTRALPVACAMEMIHSYSLVHDDL 91
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPR-VLRVIAE 183
P MDDD RRG+P+ H V+G AIL GDAL L F+ I++ EPR V +V+ E
Sbjct: 92 PAMDDDDLRRGKPTCHKVFGEANAILTGDALLTLAFE-IMTACAELPGMEPRYVAKVVRE 150
Query: 184 IARAVGSTGMAAGQFLDLEGEPNLVEF-----VQEKKFGEMSECSAVCGGFLAGADDDEI 238
ARAVGS GM GQ LDLE E +F + KK G + G L G +D+ +
Sbjct: 151 TARAVGSLGMVGGQVLDLELEGKDTDFFTLKTLHSKKTGALFRACLRAGALLFGVEDERL 210
Query: 239 QSLRRYGRAVGVLYQVVDDILEAKAQ-----TPRDEEKKKKKGKSYVAFYGVEKAMEVAE 293
Q+L RY G+ +Q+ DDIL+ + P ++KK+K +Y + G+++A ++A+
Sbjct: 211 QALTRYAENFGLAFQITDDILDVEGDEKITGKPVGSDEKKQK-VTYPSLLGMDEAKKLAK 269
Query: 294 ELRAKAKEELDRFKKYGDNV--LPLY 317
+A E L+ F D + L LY
Sbjct: 270 SSVEEAVESLNVFGAEADFLRNLALY 295
>gi|168186200|ref|ZP_02620835.1| geranyltranstransferase [Clostridium botulinum C str. Eklund]
gi|169295787|gb|EDS77920.1| geranyltranstransferase [Clostridium botulinum C str. Eklund]
Length = 289
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 149/277 (53%), Gaps = 22/277 (7%)
Query: 64 KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDD 123
+Y + +Y++M+YSV G KR P++ + ++ N P ACA+EM+H SLIHDD
Sbjct: 23 RYNKMVYDAMKYSVEV-GGKRIRPILMLCTYSVYKDNYKEIMPMACAIEMIHTYSLIHDD 81
Query: 124 LPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAE 183
LP MD+D RRG+P+NH V+G +AILAGD L + +++ + + + ++I+E
Sbjct: 82 LPAMDNDDLRRGKPTNHKVFGEAMAILAGDGLLNEAMNIMFNYSLNNDIKALKASKIISE 141
Query: 184 IARAVGSTGMAAGQFLDL--EGEP---NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEI 238
A G GM GQ +D+ EG+ + + ++ + K G++ + S + G L A ++++
Sbjct: 142 ---AAGVEGMIGGQVVDIISEGKKISIDNLRYMHKNKTGKLIKSSIIAGAILGDAPNEDV 198
Query: 239 QSLRRYGRAVGVLYQVVDDILEA-------KAQTPRDEEKKKKKGKSYVAFYGVEKAMEV 291
L +G +G+ +Q+ DDIL+ + +D+E K ++++ +G+E E+
Sbjct: 199 NILDEFGEKLGLAFQIKDDILDVIGDEKILGKEVHKDKENNK---TTFISEFGLEGCKEM 255
Query: 292 AEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
L +E L K+ N L + ++ R+F
Sbjct: 256 CVNL---TEECLKLLKQIKSNTGELENITEFLMKRQF 289
>gi|336434225|ref|ZP_08614025.1| hypothetical protein HMPREF0991_03144 [Lachnospiraceae bacterium
2_1_58FAA]
gi|336014268|gb|EGN44124.1| hypothetical protein HMPREF0991_03144 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 296
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 133/249 (53%), Gaps = 20/249 (8%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
Y E I ++M YS+LA G KR P++ +FG P A+EM+H SL+HDDL
Sbjct: 28 YQEVIMDAMSYSMLA-GGKRLRPMLMQETYRMFGGTDRVIEPFMAAIEMIHTYSLVHDDL 86
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVL--RVIA 182
P MD+D RRG+ + H VYG D+ IL GDAL F+ + + + PE +L + I
Sbjct: 87 PAMDNDEYRRGRKTTHVVYGEDMGILTGDALLNYAFE--TAASAFEMAPEKSLLIGKAIR 144
Query: 183 EIARAVGSTGMAAGQFLD-------LEGEPNLVEFVQEKKFGEMSECSAVCGGFLAGADD 235
+ + G GM GQ +D ++GE +EF+ K G + E S + G LAGADD
Sbjct: 145 ILGQKAGIYGMIGGQVVDVKSSGKKIDGEK--LEFIYRLKTGALIEASMMIGAVLAGADD 202
Query: 236 DEIQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYVAFYGVEKAME 290
+ +Q + VG+ +Q+ DDIL+ + T P ++K +K +YV + G++ A +
Sbjct: 203 ESVQVVEEIAAKVGMAFQIQDDILDVISTTEVLGKPVHSDEKNEK-MTYVVWKGLDAAKQ 261
Query: 291 VAEELRAKA 299
E L KA
Sbjct: 262 EVEHLSRKA 270
>gi|423389504|ref|ZP_17366730.1| hypothetical protein ICG_01352 [Bacillus cereus BAG1X1-3]
gi|401641595|gb|EJS59312.1| hypothetical protein ICG_01352 [Bacillus cereus BAG1X1-3]
Length = 297
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 150/267 (56%), Gaps = 17/267 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + E+M YS L G KR P++ A + FG + ACALEM+H SLIHDDLP
Sbjct: 31 PNVLREAMAYS-LEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLIHDDLP 89
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH V+G +A+LAGD L FQ I+++ + E +V R++ E+A
Sbjct: 90 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKV-RLVLELA 148
Query: 186 RAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM AGQ D+E E N +E++ + K G++ E + + G L+ A +++ +
Sbjct: 149 KAAGPEGMVAGQVADMEAEGKRLTINELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEK 208
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVAE 293
L + + +G+ +Q+ DDIL+ + +EE K G +Y + V++A + E
Sbjct: 209 LLAFAKYIGLAFQIRDDILDVEGT---EEEIGKPIGSDASNEKSTYTTLFTVDRAKSILE 265
Query: 294 ELRAKAKEELDRFKKYGDNVLPLYSFI 320
E AKAK+ + + + +L + I
Sbjct: 266 ETIAKAKDSISSLQLQDEYLLSICDLI 292
>gi|395792807|ref|ZP_10472231.1| hypothetical protein MEI_00852 [Bartonella vinsonii subsp.
arupensis Pm136co]
gi|395432364|gb|EJF98353.1| hypothetical protein MEI_00852 [Bartonella vinsonii subsp.
arupensis Pm136co]
Length = 300
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 152/301 (50%), Gaps = 24/301 (7%)
Query: 42 LKTYWTTLITEIDQNLEKAIT---VKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
L T+ ++ +D L I + PE + ++MRY VL G KR P + + + LF
Sbjct: 8 LATHGRSVEKRLDGLLNNKIENGEIARPEILLKAMRYGVL-NGGKRLRPFLVIQSGALFD 66
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
+ + ACALE VH SLIHDDLP MD+D RRGQP+ H + AILAG+AL
Sbjct: 67 IPPEHSLDVACALECVHCYSLIHDDLPAMDNDTLRRGQPTVHKAFDEATAILAGNALLTF 126
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVE-----FVQE 213
F+ I++H L E R+ ++I +A++ G GM GQ LD+E E E +Q
Sbjct: 127 AFE-IIAHKAFALSFETRI-KLITALAQSAGLGGMIGGQMLDIEAEKTPQESTNIMTLQR 184
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K + + G ++ A + + L +G +G+ +Q+ DD+L+ T E+ K
Sbjct: 185 MKTAALISFACQAGAIISNASQELTEKLAAFGTYLGLAFQLTDDLLD---MTANSEDLGK 241
Query: 274 KKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
GK ++V YG+++ + +EL AKA+ L F G+ PL ++A R
Sbjct: 242 TAGKDETAQKATFVRLYGIKETQKKRDELIAKAESLLHSF---GEKAKPLQQAAHFSATR 298
Query: 327 E 327
+
Sbjct: 299 K 299
>gi|168335575|ref|ZP_02693638.1| Polyprenyl synthetase [Epulopiscium sp. 'N.t. morphotype B']
Length = 288
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 96/274 (35%), Positives = 145/274 (52%), Gaps = 17/274 (6%)
Query: 52 EIDQNLEKAITVKYPE--QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTAC 109
+ID+ L + + E ++ E+MRYSVL G + P +M +A + G IA P C
Sbjct: 8 KIDEMLXNYLAKETGECTRLQEAMRYSVLQGGKRIRPILMRLAYEAVGGTGNIA--PYMC 65
Query: 110 ALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPP 169
A+E VH SLIHDDLP MD+D RRG P+NH + AILAGD L L F+ ++
Sbjct: 66 AIEFVHTYSLIHDDLPAMDNDALRRGLPTNHVKFDEATAILAGDGLLTLAFEIMLQDLVS 125
Query: 170 HLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEP---NLVEFVQEKKFGEMSECSA 224
+ P + I +A G++GM GQ D+ EG+ ++E +Q K G + + +
Sbjct: 126 DMDPAKAIAANI--LATGAGASGMVLGQMYDMFYEGKEISIEMLEKIQLNKTGALIKSAL 183
Query: 225 VCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP---RD-EEKKKKKGKSYV 280
G L + E+ +L YG +G ++Q++DDIL+ Q +D K K +Y
Sbjct: 184 KMGAVLGYGSESELFALELYGIYLGKVFQIIDDILDITGQVNELGKDIGSDSKNKKVTYT 243
Query: 281 AFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVL 314
+F+ V++ E+A EL AKA + LD+ GD L
Sbjct: 244 SFFSVDQCYEIAAELTAKAIKCLDKVN--GDTSL 275
>gi|423674030|ref|ZP_17648969.1| hypothetical protein IKS_01573 [Bacillus cereus VDM062]
gi|401309581|gb|EJS14914.1| hypothetical protein IKS_01573 [Bacillus cereus VDM062]
Length = 297
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 149/267 (55%), Gaps = 17/267 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + E+M YS L G KR P++ A + FG R ACALEM+H SLIHDDLP
Sbjct: 31 PNVLREAMAYS-LEAGGKRFRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDDLP 89
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH V+G +A+LAGD L FQ I+++ + E +V R++ E+A
Sbjct: 90 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKV-RLVLELA 148
Query: 186 RAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM AGQ D+E E N +E++ K G++ E + + G L+ A +++ +
Sbjct: 149 KAAGPEGMVAGQVADMEAEGKRLTINELEYIHNHKTGKLLEFAVLAGAILSDATEEQEEK 208
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVAE 293
L + + +G+ +Q+ DDIL+ + +EE K G +Y + V++A + E
Sbjct: 209 LLAFAKYIGLAFQIRDDILDVEGT---EEEIGKPIGSDASNEKSTYTTLFTVDRAKSILE 265
Query: 294 ELRAKAKEELDRFKKYGDNVLPLYSFI 320
E AKAK+ + + + +L + I
Sbjct: 266 EKIAKAKDSISSLQLQDEYLLSICDLI 292
>gi|212638788|ref|YP_002315308.1| geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus
WK1]
gi|212560268|gb|ACJ33323.1| Geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus
WK1]
Length = 290
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 127/230 (55%), Gaps = 14/230 (6%)
Query: 52 EIDQNLEKAI-TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACA 110
+I+Q L I +++ P+ I E+M YS+ A G KR P++ ++ F ACA
Sbjct: 11 QIEQQLPAYIESLQAPQTIKEAMLYSLQA-GGKRIRPLLLLSTLHAFRKPIDIGMSVACA 69
Query: 111 LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPH 170
LEM+H SLIHDDLP MD+D RRG+P+NH V+G AILAGDAL FQ +
Sbjct: 70 LEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEANAILAGDALLTYAFQVVADDKT-- 127
Query: 171 LVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAV 225
+ +R+I+E+A+A G GM GQ DLEGE + E++ K G++ + S
Sbjct: 128 -ISSDVKVRLISELAKAAGPEGMVGGQVADLEGEGKTISLQQLEYIHRHKTGKLLQYSIR 186
Query: 226 CGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKK 275
G L A + ++ L + +G+ +Q+ DDIL+ + DE+K KK
Sbjct: 187 AGAILGEATEQQLTLLTLFADHLGLAFQIRDDILDIEG----DEQKIGKK 232
>gi|284048214|ref|YP_003398553.1| polyprenyl synthetase [Acidaminococcus fermentans DSM 20731]
gi|283952435|gb|ADB47238.1| Polyprenyl synthetase [Acidaminococcus fermentans DSM 20731]
Length = 291
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 151/299 (50%), Gaps = 20/299 (6%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
+L++Y + ++ L+ + V + ++M YSV A G KR P++ +AA + G
Sbjct: 1 MELRSYLRSRGALVNGYLQVRLGVGSISPVDKAMMYSV-AAGGKRLRPILLMAAADAVGA 59
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A LEM+H SLIHDDLP MD+D RRG+ +NH V+G +A+LAGD L
Sbjct: 60 KGSDFVAVAAGLEMIHTYSLIHDDLPSMDNDDYRRGRLTNHKVFGDAMALLAGDGLLTQA 119
Query: 160 FQHIVSHTPPHLVPEPRV-LRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEKKF-- 216
F+ ++ +P+V L V+ +A+ G TGM GQ LD+ E + Q KK
Sbjct: 120 FEVMLEQRG----VDPKVLLEVVRLVAKCAGPTGMVGGQALDITSEDQQLTLEQMKKLHE 175
Query: 217 ---GEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRD 268
G M + G L GAD + ++ + + G+ +Q+ DDIL+ + P
Sbjct: 176 AKTGAMFVAAVRGGAMLGGADPETLRIMTHFANLFGLAFQITDDILDVEGDAKVMGKPAH 235
Query: 269 EEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
++K K +YV+ +G+EKA E+A + +A+E L G+ PL Y +R+
Sbjct: 236 SDEKLHK-STYVSLFGLEKAREMAAQTLKEAEETL---APLGEKAQPLVEITRYLYNRK 290
>gi|355624222|ref|ZP_09047583.1| hypothetical protein HMPREF1020_01662 [Clostridium sp. 7_3_54FAA]
gi|354821983|gb|EHF06358.1| hypothetical protein HMPREF1020_01662 [Clostridium sp. 7_3_54FAA]
Length = 294
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 131/245 (53%), Gaps = 13/245 (5%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
+ + I+E+M YSV A G KR P++ LFG P A+EM+H +SLIHDDL
Sbjct: 27 HQKTIFEAMNYSVKAGG-KRLRPLLMREVYRLFGGTGKEIEPFMAAIEMIHTSSLIHDDL 85
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
PCMD+D RRG+ + VYG D+A+LAGDAL + + RV + I +
Sbjct: 86 PCMDNDEYRRGKKTTWVVYGYDMAVLAGDALLIYAIE-TAARAFQMTDNAQRVGKCIGIL 144
Query: 185 ARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A+ G GM GQ +D+E L+ +F+ K G + E + V G +AGA D+E +
Sbjct: 145 AQKTGIYGMIGGQTVDVELTDKLIPKDKLDFIYRLKTGALLEAAMVIGAVMAGASDEECE 204
Query: 240 SLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYVAFYGVEKAMEVAEE 294
++ R A+G+ +Q+ DDIL+ + P ++K K +YV+ G+EKA E+
Sbjct: 205 TVERMAAAIGLAFQIQDDILDVTSSQEVLGKPVLSDEKNNK-TTYVSLEGIEKAKRDVEK 263
Query: 295 LRAKA 299
L A
Sbjct: 264 LSETA 268
>gi|373458497|ref|ZP_09550264.1| Polyprenyl synthetase [Caldithrix abyssi DSM 13497]
gi|371720161|gb|EHO41932.1| Polyprenyl synthetase [Caldithrix abyssi DSM 13497]
Length = 286
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 146/280 (52%), Gaps = 15/280 (5%)
Query: 52 EIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACAL 111
EIDQ L+ + E +Y+S YS A G KR V ELF V + AC++
Sbjct: 15 EIDQRLQNDNPL--IEALYKSAAYS--AAGGKRIRAVFVFYTGELFDVPQEKLINAACSI 70
Query: 112 EMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHL 171
E++HAASLI DDLP MDD RRG+P+NH V+G D+A+LA L G Q I+S HL
Sbjct: 71 ELIHAASLIMDDLPYMDDSQLRRGKPANHVVFGQDVALLASIGLISEGIQMILS--DAHL 128
Query: 172 VPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN-----LVEFVQEKKFGEMSECSAVC 226
+ R L+ ++ + G G+AAGQF+DL+ + ++EF+ +KK + +
Sbjct: 129 TEDER-LKAAQVLSASFGFNGLAAGQFVDLKIKDKNVNFEIIEFINQKKTAALFSAAGKV 187
Query: 227 GGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVAFYGVE 286
+ A++D+ +++++ +G +Q+VDD+L+ + + + ++V G+E
Sbjct: 188 AAIIGHANEDQAAAIQKFSEDIGFAFQIVDDMLDVIGEEKLVGKNIGQDRMNFVKLVGME 247
Query: 287 KAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
+A + E KA + L+ F GD L DY R
Sbjct: 248 QARKYLAEYHQKAVKSLEIF---GDKAAGLKELSDYLIQR 284
>gi|365895658|ref|ZP_09433761.1| putative Geranyltranstransferase (Farnesyl-diphosphate synthase)
(FPP synthase) [Bradyrhizobium sp. STM 3843]
gi|365423584|emb|CCE06303.1| putative Geranyltranstransferase (Farnesyl-diphosphate synthase)
(FPP synthase) [Bradyrhizobium sp. STM 3843]
Length = 307
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 100/268 (37%), Positives = 136/268 (50%), Gaps = 18/268 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P+++ ESMRYS L G KR P + V + +FGV A ALE +H SLIHDDLP
Sbjct: 40 PKRLIESMRYSSL-NGGKRLRPFLVVESAAIFGVPPTGALLAGAALECIHCYSLIHDDLP 98
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRV-LRVIAEI 184
MD+ RRG+P+ H VY AILAGDAL + F I++ H P+ V L + +
Sbjct: 99 AMDNSDLRRGRPTLHKVYDDATAILAGDALLTIAFD-IITRDEIH--PDAGVRLALTRAL 155
Query: 185 ARAVGSTGMAAGQFLDLEG-------EPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDE 237
AR G GMA GQ LDL G EP V VQ+ K G + + G L A E
Sbjct: 156 ARCAGIGGMAGGQILDLAGEGRFGDREPVDVARVQQMKTGALLRFGCIAGAILGQASAKE 215
Query: 238 IQSLRRYGRAVGVLYQVVDDIL--EAKAQT---PRDEEKKKKKGKSYVAFYGVEKAMEVA 292
Q+L +GRA+G +Q+ DD+L E+ A T P + + K ++V G+E A +
Sbjct: 216 YQALDDFGRALGEAFQIADDLLDVESDAATLGKPAGADAELGK-TTFVTQLGIEGAKQRV 274
Query: 293 EELRAKAKEELDRFKKYGDNVLPLYSFI 320
+L A+ L F D + F+
Sbjct: 275 RDLLARGDAALSMFGSKADVLRATARFV 302
>gi|423452515|ref|ZP_17429368.1| hypothetical protein IEE_01259 [Bacillus cereus BAG5X1-1]
gi|423470398|ref|ZP_17447142.1| hypothetical protein IEM_01704 [Bacillus cereus BAG6O-2]
gi|401140153|gb|EJQ47710.1| hypothetical protein IEE_01259 [Bacillus cereus BAG5X1-1]
gi|402436527|gb|EJV68557.1| hypothetical protein IEM_01704 [Bacillus cereus BAG6O-2]
Length = 297
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 150/267 (56%), Gaps = 17/267 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + E+M YS L G KR P++ A + FG + ACALEM+H SLIHDDLP
Sbjct: 31 PNVLREAMAYS-LEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLIHDDLP 89
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH V+G +A+LAGD L FQ I+++ + E +V R++ E+A
Sbjct: 90 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKV-RLVLELA 148
Query: 186 RAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM AGQ D+E E N +E++ + K G++ E + + G L+ A +++ +
Sbjct: 149 KAAGPEGMVAGQVADMEAEGKRLTINELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEK 208
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVAE 293
L + + +G+ +Q+ DDIL+ + +EE K G +Y + V++A + E
Sbjct: 209 LLAFAKYIGLAFQIRDDILDVEGT---EEEIGKPIGSDASNEKSTYTTLFTVDRAKSILE 265
Query: 294 ELRAKAKEELDRFKKYGDNVLPLYSFI 320
E AKAK+ + + + +L + I
Sbjct: 266 ETIAKAKDSISSLQLQDEYLLSICDLI 292
>gi|167842189|ref|ZP_02468873.1| geranyltranstransferase [Burkholderia thailandensis MSMB43]
Length = 294
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 101/269 (37%), Positives = 141/269 (52%), Gaps = 22/269 (8%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P Q++E+MRY+VL G KR P++C AA EL G + A + ALEM+H SL+HDD+P
Sbjct: 29 PAQLHEAMRYAVLGGG-KRVRPLLCHAAGELTGASEAALNAASSALEMIHVYSLVHDDMP 87
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GDAL F V+ T +P R ++ E+A
Sbjct: 88 CMDDDALRRGKPTVHVKYDEPTALLVGDALQSQAF---VALTDAAALPADRQAALVCELA 144
Query: 186 RAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAGA--DDDEI 238
A GS GMA GQ +DL + +E + K G + S V G LAG D +
Sbjct: 145 LASGSIGMAGGQAIDLASVGVALTRDALETMHRMKTGALLRAS-VRMGALAGETPSGDAM 203
Query: 239 QSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEV 291
++L Y AVG+ +QVVDDIL+ T K GK +YV+ G++ + +
Sbjct: 204 RALDAYAAAVGLAFQVVDDILDV---TTDSATLGKTAGKDAANDKPTYVSIIGLDASRAL 260
Query: 292 AEELRAKAKEELDRFKKYGDNVLPLYSFI 320
A +LRA A L+ F + L +
Sbjct: 261 AAQLRADAHAALEPFGARAQRLAELADLV 289
>gi|322434675|ref|YP_004216887.1| polyprenyl synthetase [Granulicella tundricola MP5ACTX9]
gi|321162402|gb|ADW68107.1| Polyprenyl synthetase [Granulicella tundricola MP5ACTX9]
Length = 320
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 156/323 (48%), Gaps = 39/323 (12%)
Query: 38 TQFDLKTYWTTLITEIDQNLEKAITV--KYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
+ D+K T D LE+ + P I+ +MR+S A G KR P++ + A
Sbjct: 3 SHTDVKHLLKAGATLTDAALERLLPAPDTLPHSIHRAMRHSTFAGG-KRLRPILALEAAR 61
Query: 96 LF-GVNRIAAFPTACALE-----MVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAI 149
+ G A TA A M+H SLIHDDLP +D+D RRGQP+ H V+G AI
Sbjct: 62 MVSGGTLTPALETAAAELGAALEMIHTYSLIHDDLPALDNDDLRRGQPTCHVVFGEATAI 121
Query: 150 LAGDALFPLGFQHIVS-HTPPHLVPEPRVLR-VIAEIARAVGST---------GMAAGQF 198
LAGDAL L FQ I + H P V +LR V A +A VGS GM GQ
Sbjct: 122 LAGDALQTLAFQTIANLHAPAATVVS--ILREVSAAVATGVGSVGDLHTSLPPGMIGGQV 179
Query: 199 LDLEGE-----PNLVEFVQEKKFGEMSECSAVCGGFLAGADD-----DEIQSLRRYGRAV 248
+D+E E LVE + K G + S V GG L D D I LR +G+
Sbjct: 180 MDIESEGVKPTAELVEAIHRAKTGALITVSVVAGGLLGLGDQPSTTHDTIARLRTFGQKA 239
Query: 249 GVLYQVVDDILEA---KAQTPRDEEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELD 304
G+ +Q+VDD+L+ AQ + K K ++ A +G+ +++ AEEL A A L
Sbjct: 240 GLAFQIVDDVLDMTQDSAQLGKTAGKDTATDKATWPAVFGIPQSIHDAEELIADAFAALA 299
Query: 305 RFKKYGDNVLPLYSFIDYAADRE 327
RF + PL + ++ +R+
Sbjct: 300 RF---AETAAPLKALANFLTERK 319
>gi|255524169|ref|ZP_05391129.1| Polyprenyl synthetase [Clostridium carboxidivorans P7]
gi|296186627|ref|ZP_06855029.1| putative geranyltranstransferase [Clostridium carboxidivorans P7]
gi|255512154|gb|EET88434.1| Polyprenyl synthetase [Clostridium carboxidivorans P7]
gi|296048664|gb|EFG88096.1| putative geranyltranstransferase [Clostridium carboxidivorans P7]
Length = 293
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 134/251 (53%), Gaps = 13/251 (5%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
Y +++YE+M YS L G KR P++ + L+ + P A A+EM+H SLIHDDL
Sbjct: 28 YNKKVYEAMEYS-LGAGGKRIRPLLLLLTYMLYKDDFEKVLPIASAVEMIHTYSLIHDDL 86
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
PCMD+D RRG+P+NH V+G +A+LAGD L G ++ + + ++ + I
Sbjct: 87 PCMDNDDLRRGKPTNHKVFGEAVAVLAGDGLLNEGMSIMLKSC---MNEQHNFIKACSFI 143
Query: 185 ARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A + G+ GM GQ +D+ E + ++ KK G + + S + G L A +I+
Sbjct: 144 AESAGAEGMVGGQTVDILSENTKIPIDQLYYMHSKKTGAIIKASIIAGAILGEAPKRDIE 203
Query: 240 SLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK----KKGKSYVAFYGVEKAMEVAEEL 295
+L YG+ +G+ +Q+ DDIL+ T +K K +++ YG+ K +E+ +
Sbjct: 204 NLEYYGQKLGLAFQIKDDILDIVGDTEVLGKKAKSDLDNNKTTFITTYGLNKCIEMCNSI 263
Query: 296 RAKAKEELDRF 306
A+ E LD
Sbjct: 264 TAECIEVLDNI 274
>gi|257885167|ref|ZP_05664820.1| polyprenyl synthetase [Enterococcus faecium 1,231,501]
gi|430853498|ref|ZP_19471226.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1258]
gi|431446004|ref|ZP_19513686.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1630]
gi|431760565|ref|ZP_19549162.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E3346]
gi|257821019|gb|EEV48153.1| polyprenyl synthetase [Enterococcus faecium 1,231,501]
gi|430540579|gb|ELA80781.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1258]
gi|430585648|gb|ELB23920.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1630]
gi|430623650|gb|ELB60328.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E3346]
Length = 296
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 134/252 (53%), Gaps = 19/252 (7%)
Query: 69 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMD 128
+Y++M YSV A G + P ++ A + + A ALEMVH SLIHDDLP MD
Sbjct: 31 LYDAMSYSVKAGGKRIRPLLLLTAVASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPAMD 90
Query: 129 DDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAV 188
+D RRG+P+NH V+G +AILAGD L FQ I + HL P++L ++ ++A
Sbjct: 91 NDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLI---SMAHLGNSPKLL-LLQQLAVCA 146
Query: 189 GSTGMAAGQFLDLEGEPNLVE-----FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRR 243
GS GM AGQ D+EGE + F+ E+K G + + + GG LA ++ I L+R
Sbjct: 147 GSQGMVAGQAADIEGESKKLSLEELAFIHERKTGHLIRYALLAGGILAKQPEEIILLLQR 206
Query: 244 YGRAVGVLYQVVDDILEAKAQTP-------RDEEKKKKKGKSYVAFYGVEKAMEVAEELR 296
+G+ +Q+ DD+L+ T +DE +K +Y G+EK E E
Sbjct: 207 LAEHLGLAFQIRDDLLDVIGTTKTLGKTAGKDERMEK---NTYPRLLGLEKTREALEIEL 263
Query: 297 AKAKEELDRFKK 308
A + +D+ ++
Sbjct: 264 LSANKIIDKLEE 275
>gi|300722008|ref|YP_003711288.1| geranyltranstransferase [Xenorhabdus nematophila ATCC 19061]
gi|297628505|emb|CBJ89072.1| geranyltranstransferase (=farnesyldiphosphate synthase)
[Xenorhabdus nematophila ATCC 19061]
Length = 315
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 94/257 (36%), Positives = 131/257 (50%), Gaps = 11/257 (4%)
Query: 81 GTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNH 140
G KR P + + E+FG++R + A ALE +HA SLIHDDLP MD+D RRGQP+ H
Sbjct: 59 GGKRLRPFLVYSVGEMFGLSRKSLDAAALALECIHAYSLIHDDLPAMDNDDLRRGQPTCH 118
Query: 141 TVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLD 200
+G AILAGDAL L F+ + + P + R L ++AE+A A G GM GQ LD
Sbjct: 119 IKFGESQAILAGDALQSLAFELLAHYDMPDVALSDR-LAMVAELASASGFAGMCGGQSLD 177
Query: 201 LEGEPNLVEF-----VQEKKFGEMSECSAVCGGFLAGADDDE-IQSLRRYGRAVGVLYQV 254
LE E ++ + K G + +A G + AG E I L +Y +A+G+ +QV
Sbjct: 178 LEAEGKQIDLASLEQIHRHKTGALIRAAARLGAYSAGQRGREVIPLLDQYTQAIGLAFQV 237
Query: 255 VDDILEAKAQT----PRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYG 310
DDIL+ T R ++ +Y A G+E+A E A EL +A L K
Sbjct: 238 HDDILDVIGNTEIIGKRQGNDQQIGKNTYPALLGLEQAQEKARELYEEAITALTELDKKS 297
Query: 311 DNVLPLYSFIDYAADRE 327
N L + +R
Sbjct: 298 YNTRALKKLAGFIIERN 314
>gi|95928787|ref|ZP_01311533.1| Twin-arginine translocation pathway signal [Desulfuromonas
acetoxidans DSM 684]
gi|95135132|gb|EAT16785.1| Twin-arginine translocation pathway signal [Desulfuromonas
acetoxidans DSM 684]
Length = 297
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 115/301 (38%), Positives = 167/301 (55%), Gaps = 20/301 (6%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVK--YPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
DLK Y T+ +++ L + + K +P Q++E+M YSV A G KR P++ +AACE
Sbjct: 1 MDLKNYLTSQRQRVEEALAQTLPPKQQHPTQLHEAMHYSVFAGG-KRLRPILMMAACEAV 59
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G + P ACA+EM+H SLIHDDLP MDDD RRGQP+NH V+G AILAGDAL
Sbjct: 60 GGDIENVLPAACAMEMIHTYSLIHDDLPAMDDDDLRRGQPTNHKVFGEATAILAGDALLT 119
Query: 158 LGFQHIVSHTPPHLVP-EPRVLR-VIAEIARAVGSTGMAAGQFLDLEGE----PNL--VE 209
F +V P V R R VI +ARA G+ GM GQ +D+E E P+L V+
Sbjct: 120 EAF--VVLSAPSDSVQINDRTRREVIQLLARAAGAAGMVGGQIVDMEAEGMEQPDLATVD 177
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEA---KAQTP 266
++ K G + S G L GA+ ++ ++L R+G+ G+ +Q+ DDIL+ + Q
Sbjct: 178 YIHAHKTGALILASIRAGALLGGANTEQYEALSRFGKLAGLAFQIADDILDITGDQEQLG 237
Query: 267 RDEEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAAD 325
+D +++GK +Y A G+ +++ A EL +A L + D PL Y +
Sbjct: 238 KDIGSDQERGKATYPAVLGLSESIRRATELHQQA---LKALEPLADAAEPLRQISHYIIN 294
Query: 326 R 326
R
Sbjct: 295 R 295
>gi|430824050|ref|ZP_19442617.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0120]
gi|430867363|ref|ZP_19482357.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1574]
gi|431743222|ref|ZP_19532102.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2071]
gi|430441434|gb|ELA51531.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0120]
gi|430550374|gb|ELA90170.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1574]
gi|430607056|gb|ELB44384.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2071]
Length = 296
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 134/252 (53%), Gaps = 19/252 (7%)
Query: 69 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMD 128
+Y++M YSV A G + P ++ A + + A ALEMVH SLIHDDLP MD
Sbjct: 31 LYDAMSYSVKAGGKRIRPLLLLTAVASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPAMD 90
Query: 129 DDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAV 188
+D RRG+P+NH V+G +AILAGD L FQ I + HL P++L ++ ++A
Sbjct: 91 NDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLI---SMAHLGNSPKLL-LLQQLAVCA 146
Query: 189 GSTGMAAGQFLDLEGEPNLVE-----FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRR 243
GS GM AGQ D+EGE + F+ E+K G + + + GG LA ++ I L+R
Sbjct: 147 GSQGMVAGQAADIEGESKKLSLEELAFIHERKTGHLIRYALLAGGILAKQPEEIILLLQR 206
Query: 244 YGRAVGVLYQVVDDILEAKAQTP-------RDEEKKKKKGKSYVAFYGVEKAMEVAEELR 296
+G+ +Q+ DD+L+ T +DE +K +Y G+EK E E
Sbjct: 207 LAEHLGLAFQIRDDLLDVIGTTKTLGKTAGKDERMEK---NTYPRLLGLEKTREALEIEL 263
Query: 297 AKAKEELDRFKK 308
A + +D+ ++
Sbjct: 264 LSANKIIDKLEE 275
>gi|299143832|ref|ZP_07036912.1| geranyltranstransferase [Peptoniphilus sp. oral taxon 386 str.
F0131]
gi|298518317|gb|EFI42056.1| geranyltranstransferase [Peptoniphilus sp. oral taxon 386 str.
F0131]
Length = 290
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 147/272 (54%), Gaps = 18/272 (6%)
Query: 46 WTTLITEIDQNLEKAITV--KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNR-- 101
++ +I I+ ++ ++ T +Y +++YESM YS L+ G KR P++ + A + +
Sbjct: 9 YSEIIELINNSIYRSFTAADEYQKKVYESMSYS-LSSGGKRVRPLLSLLAYKSVSGSEDF 67
Query: 102 IAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQ 161
P A A+E++H SLIHDDLP MD+D RRG+P+NH VY IAILAGD L + +
Sbjct: 68 TKILPFATAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYSEAIAILAGDGLLNMSAE 127
Query: 162 HIVSHTPPH--LVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL----VEFVQEKK 215
+ + + R ++ + I A G GM GQ +D+E N+ E + + K
Sbjct: 128 VMSRELDKYDEMDELKRAIKAMKYIFTASGVHGMIGGQVIDMEYGYNMNLDICESMYKLK 187
Query: 216 FGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKK 275
+ + + V G +AGA D+EI + Y +G+ YQ+ DDIL+ +A + KK+
Sbjct: 188 TAALIKAAIVSGAIIAGASDEEIATFEEYANCIGIAYQIRDDILDLEADS-------KKE 240
Query: 276 GKSYVAFYGVEKAMEVAEELRAKAKEELDRFK 307
+ V F ++ + E L A+A+E+++ +
Sbjct: 241 KNTMVNFRSNDELVSRIEGLTARAQEQINSLQ 272
>gi|424905505|ref|ZP_18329008.1| geranyltranstransferase [Burkholderia thailandensis MSMB43]
gi|390928398|gb|EIP85802.1| geranyltranstransferase [Burkholderia thailandensis MSMB43]
Length = 288
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 101/269 (37%), Positives = 141/269 (52%), Gaps = 22/269 (8%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P Q++E+MRY+VL G KR P++C AA EL G + A + ALEM+H SL+HDD+P
Sbjct: 23 PAQLHEAMRYAVLGGG-KRVRPLLCHAAGELTGASEAALNAASSALEMIHVYSLVHDDMP 81
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GDAL F V+ T +P R ++ E+A
Sbjct: 82 CMDDDALRRGKPTVHVKYDEPTALLVGDALQSQAF---VALTDAAALPADRQAALVCELA 138
Query: 186 RAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAGA--DDDEI 238
A GS GMA GQ +DL + +E + K G + S V G LAG D +
Sbjct: 139 LASGSIGMAGGQAIDLASVGVALTRDALETMHRMKTGALLRAS-VRMGALAGETPSGDAM 197
Query: 239 QSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEV 291
++L Y AVG+ +QVVDDIL+ T K GK +YV+ G++ + +
Sbjct: 198 RALDAYAAAVGLAFQVVDDILDV---TTDSATLGKTAGKDAANDKPTYVSIIGLDASRAL 254
Query: 292 AEELRAKAKEELDRFKKYGDNVLPLYSFI 320
A +LRA A L+ F + L +
Sbjct: 255 AAQLRADAHAALEPFGARAQRLAELADLV 283
>gi|220931495|ref|YP_002508403.1| farnesyl-diphosphate synthase [Halothermothrix orenii H 168]
gi|219992805|gb|ACL69408.1| farnesyl-diphosphate synthase [Halothermothrix orenii H 168]
Length = 296
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 102/305 (33%), Positives = 163/305 (53%), Gaps = 26/305 (8%)
Query: 38 TQFDLKTYWTTLITEIDQNLEKAITVK---YPEQIYESMRYSVLAKGTKRAPPVMCVAAC 94
Q ++K T +E++ L++ + ++ + ++M+YS+ + G KR P++ +
Sbjct: 2 NQVNIKEILTQYTSEVNSVLKEIMNIEKNALAPGLVKAMKYSLFS-GGKRLRPILTLMVA 60
Query: 95 ELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDA 154
E+ +R +A ++E+VH SLIHDDLP MDDD RRG+PSNH V+G AILAGDA
Sbjct: 61 EMLDGDRDSALRVGASIELVHTYSLIHDDLPSMDDDDFRRGKPSNHKVFGTATAILAGDA 120
Query: 155 LFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEK 214
L F +I+S +P +VL++I I++ G GM GQ LDLE E + + K
Sbjct: 121 LLTFAF-NILSKLN---LPPDKVLKIIEVISQGAGHNGMVGGQVLDLEAEDKEISLEELK 176
Query: 215 KF-----GEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA------ 263
K G + + S + G + A D E+ +L RY R +G+ +Q+VDDIL+
Sbjct: 177 KIHSGKTGALFKSSILAGAYCANPDRTELTALERYARYLGLTFQIVDDILDVTGNEEVLG 236
Query: 264 -QTPRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
+ RD+E K +Y G+++A++ AE KA++ L F G+ L +DY
Sbjct: 237 KRVGRDDELNK---ATYPRLLGLKQAVKEAEFNAEKARDSLGPF---GERAFLLKQLVDY 290
Query: 323 AADRE 327
R+
Sbjct: 291 ILVRQ 295
>gi|402310269|ref|ZP_10829235.1| polyprenyl synthetase [Eubacterium sp. AS15]
gi|400368721|gb|EJP21728.1| polyprenyl synthetase [Eubacterium sp. AS15]
Length = 295
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 154/303 (50%), Gaps = 24/303 (7%)
Query: 41 DLKTYWTTLITEIDQNLEKAITVK--YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
D+KT ++++++K + +K Y ++I ESM YS+L G KR PV+ + +LF
Sbjct: 2 DIKTIMQDDKEIVERHIKKIMDIKLGYSQKIIESMSYSLLG-GGKRLRPVLFIETLKLFD 60
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
++ AC LEM+H SLIHDDLP MD+D RRG+P+NH VYG D+AILAGD+L L
Sbjct: 61 IDFEQYLDIACILEMIHTYSLIHDDLPAMDNDDLRRGKPTNHIVYGEDVAILAGDSLLNL 120
Query: 159 G----FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVE----- 209
F + ++ P+ + R+ I++ G GM GQ D+ E ++
Sbjct: 121 SYEILFDFLYKNSSPNNILACRL------ISKNAGIFGMIGGQVSDVINENKEIDIENLK 174
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEA---KAQTP 266
++ K ++ S + +++ + I L Y +G+ +Q+ DDIL+ K
Sbjct: 175 YIHYNKTAKLIMASILSAAYISDCSKEYITYLESYAYNIGMAFQISDDILDVVGDKEIVG 234
Query: 267 RDEEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAAD 325
+ K ++ GK +Y ++G+E++ + AK E+ K N+ DY +
Sbjct: 235 KSIGKDEQYGKNTYPKYFGLEESKIKLKNYIDNAKREI--LKIDSKNIEFFVELADYVGN 292
Query: 326 REF 328
R F
Sbjct: 293 RNF 295
>gi|330821215|ref|YP_004350077.1| Polyprenyl synthetase [Burkholderia gladioli BSR3]
gi|327373210|gb|AEA64565.1| Polyprenyl synthetase [Burkholderia gladioli BSR3]
Length = 294
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 99/269 (36%), Positives = 141/269 (52%), Gaps = 22/269 (8%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P +++E+MRY+V+ G KR P++C AA EL G A + ALEM+H SL+HDD+P
Sbjct: 29 PGKLHEAMRYAVMGGG-KRVRPLLCHAAGELTGATEAARNAASAALEMIHVYSLVHDDMP 87
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GDAL F + V + ++R E+A
Sbjct: 88 CMDDDALRRGKPTVHIQYDEPTALLVGDALQSQAFVALTDAAALTAVQQAALVR---ELA 144
Query: 186 RAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCGGFLAGA--DDDEI 238
A GS GMA GQ +DL + +E + KK G + +AV G LAG DD +
Sbjct: 145 LASGSVGMAGGQAIDLASVGLMLTREQLETMHRKKTGALLR-AAVRMGALAGETPSDDTM 203
Query: 239 QSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEV 291
++L Y A+G+ +QVVDDIL+ T K GK +YV+ G++ + E+
Sbjct: 204 RALDVYADAIGLAFQVVDDILDV---TTDSATLGKTAGKDAAANKPTYVSIIGLDASREL 260
Query: 292 AEELRAKAKEELDRFKKYGDNVLPLYSFI 320
A +LRA A L F + L +
Sbjct: 261 AAQLRADAHAALQPFGARAQRLAELADLV 289
>gi|374312746|ref|YP_005059176.1| geranyltranstransferase [Granulicella mallensis MP5ACTX8]
gi|358754756|gb|AEU38146.1| Geranyltranstransferase [Granulicella mallensis MP5ACTX8]
Length = 324
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 112/332 (33%), Positives = 160/332 (48%), Gaps = 57/332 (17%)
Query: 40 FDLKTYWTTLITEIDQNLEK---AITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
D+++ T D LE+ A T++ P I+ +MR+S A G KR P++C+ A ++
Sbjct: 3 IDVQSILKTGAAITDAALERLLPAATIE-PYSIHRAMRHSTFAGG-KRLRPILCMEAAKM 60
Query: 97 FGVNRI--------AAFP-----TACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVY 143
A P A ALEM+H SLIHDDLP +D+D RRGQP+ H V+
Sbjct: 61 VASTDFYPPEEAAPAGHPEGVANLAAALEMLHTYSLIHDDLPALDNDDLRRGQPTCHVVF 120
Query: 144 GVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGST------------ 191
G AILAGDAL L FQ I S P PE V+ ++ +I+ ++G+
Sbjct: 121 GEATAILAGDALQTLAFQTIASLPAP---PE-AVVAILRKISLSIGTGIGRWGDHDTGIA 176
Query: 192 -GMAAGQFLDLEGE-----PNLVEFVQEKKFGEMSECSAVCGGFLA----GADDDEIQSL 241
GM GQ +D+E E P+LVE + K G + S V G G + +
Sbjct: 177 PGMIGGQVVDIESEGTKPTPDLVEAIHRAKTGALITVSIVAGAIYGSSRHGLPSSYHERI 236
Query: 242 RRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEE 294
R +G G+ +Q+VDD+L+ T EE K GK ++ A +G+E++ A E
Sbjct: 237 RTFGEKAGLAFQIVDDVLD---MTQSSEELGKTAGKDTATDKATWPAVFGIEQSKHDAAE 293
Query: 295 LRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
L A A L+ F GD PL S Y +R
Sbjct: 294 LIADAFAALEPF---GDAATPLKSLAQYLVER 322
>gi|83648505|ref|YP_436940.1| geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC
2396]
gi|83636548|gb|ABC32515.1| Geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC
2396]
Length = 299
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 153/296 (51%), Gaps = 26/296 (8%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPE----QIYESMRYSVLAKGTKRAPPVMCVAACELF 97
L ++ +IDQ L A + PE ++ E+M Y VL G KR P++ +A E
Sbjct: 8 LDDFFQRNRAQIDQAL--ANLLPEPEGPKARLNEAMGYCVL-NGGKRVRPLLLLATTEAL 64
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G + A P CA+E++HA SL+HDDLP MDDD RRG+P+ H Y AIL GD L
Sbjct: 65 GGDLQQALPACCAVELIHAYSLVHDDLPAMDDDSLRRGKPTCHIAYDEATAILVGDGLQT 124
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQ 212
L F + T VL+++ E+ARA G GM GQ +D+ E + +E +
Sbjct: 125 LAFSAL---TESSGASAESVLQMVRELARASGHQGMVGGQAIDIYSEGHTLKLEELERMH 181
Query: 213 EKKFGEMSECSAVCGGFLAGADDDE-IQSLRRYGRAVGVLYQVVDDILEAKAQTP----- 266
+K G + E S V G +G D E I+ LRR+ RA+G+ +QV DDI++ ++ T
Sbjct: 182 LEKTGALIEASIVLGALASGRADAECIEGLRRFARAIGLAFQVRDDIIDVESDTSVLGKT 241
Query: 267 --RDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+D E+ K +Y + G+E+A A +L +A +L + L SF+
Sbjct: 242 AGKDAERNK---PTYTSLLGLEQAKLKALQLHNEALSQLQALGLQNSRLQDLASFM 294
>gi|332686260|ref|YP_004456034.1| octaprenyl-diphosphate synthase/ dimethylallyltransferase/
geranyltranstransferase [Melissococcus plutonius ATCC
35311]
gi|332370269|dbj|BAK21225.1| octaprenyl-diphosphate synthase/ dimethylallyltransferase/
geranyltranstransferase (farnesyldiphosphate synthase)/
geranylgeranyl pyrophosphate synthetase [Melissococcus
plutonius ATCC 35311]
Length = 296
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 96/274 (35%), Positives = 143/274 (52%), Gaps = 22/274 (8%)
Query: 41 DLKTYWTTLITEIDQNLEKAITVKYPEQ-IYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
D + I I++ + I +Q + ++M YS+ A G KR P++ +A F
Sbjct: 3 DFTIFKQKHIDRIEKEMANFIESHTSDQSLKKAMLYSIQA-GGKRLRPLLLLATINSFNC 61
Query: 100 -NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
A+ TA ALEM+H SLIHDDLP MD+D RRG+P+NH ++G +AILAGD L
Sbjct: 62 PIEQGAYQTAAALEMLHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEALAILAGDGLLTG 121
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP---NLVEF--VQE 213
FQ + T + + + + + + G+ GM AGQ DL+GE NL E V
Sbjct: 122 AFQLLALST----IEAGKKILLTQLLGQTAGTEGMVAGQSGDLQGEKKALNLQELSEVHR 177
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
KK G + E S + GG LA ++ I L++ A G+ +Q+ DD+L+ +E++ K
Sbjct: 178 KKTGALIEFSFMAGGILANQSEEIIYLLKQLANAFGLAFQIRDDLLDV---IGSEEKQGK 234
Query: 274 KKGK-------SYVAFYGVEKAMEVAEELRAKAK 300
K G+ +Y A G+EKA E + A AK
Sbjct: 235 KIGRDQCLNKSTYPALLGIEKAKEALTQQVANAK 268
>gi|229013396|ref|ZP_04170533.1| Geranyltranstransferase [Bacillus mycoides DSM 2048]
gi|423489365|ref|ZP_17466047.1| hypothetical protein IEU_03988 [Bacillus cereus BtB2-4]
gi|423495088|ref|ZP_17471732.1| hypothetical protein IEW_03986 [Bacillus cereus CER057]
gi|423498118|ref|ZP_17474735.1| hypothetical protein IEY_01345 [Bacillus cereus CER074]
gi|423598501|ref|ZP_17574501.1| hypothetical protein III_01303 [Bacillus cereus VD078]
gi|228747808|gb|EEL97674.1| Geranyltranstransferase [Bacillus mycoides DSM 2048]
gi|401151181|gb|EJQ58633.1| hypothetical protein IEW_03986 [Bacillus cereus CER057]
gi|401161405|gb|EJQ68772.1| hypothetical protein IEY_01345 [Bacillus cereus CER074]
gi|401236771|gb|EJR43228.1| hypothetical protein III_01303 [Bacillus cereus VD078]
gi|402431601|gb|EJV63665.1| hypothetical protein IEU_03988 [Bacillus cereus BtB2-4]
Length = 297
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 148/267 (55%), Gaps = 17/267 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + E+M YS L G KR P++ A + FG R ACALEM+H SLIHDDLP
Sbjct: 31 PNVLREAMAYS-LEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDDLP 89
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH V+G +A+LAGD L FQ I+++ + E +V R++ E+A
Sbjct: 90 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKV-RLVLELA 148
Query: 186 RAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM AGQ D+E E N +E++ K G++ E + + G L+ A +++ +
Sbjct: 149 KAAGPEGMVAGQVADMEAEGKRLTINELEYIHNHKTGKLLEFAVLAGAILSDATEEQEEK 208
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVAE 293
L + + +G+ +Q+ DDIL+ + +EE K G +Y + V++A + E
Sbjct: 209 LLAFAKYIGLAFQIRDDILDVEGT---EEEIGKPIGSDASNEKSTYTTLFTVDRAKSILE 265
Query: 294 ELRAKAKEELDRFKKYGDNVLPLYSFI 320
E AKAK + + + +L + I
Sbjct: 266 EKIAKAKASISSLQLQDEYLLSICDLI 292
>gi|166030417|ref|ZP_02233246.1| hypothetical protein DORFOR_00078 [Dorea formicigenerans ATCC
27755]
gi|166029775|gb|EDR48532.1| polyprenyl synthetase [Dorea formicigenerans ATCC 27755]
Length = 300
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 94/273 (34%), Positives = 143/273 (52%), Gaps = 20/273 (7%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVK--YPEQIYESMRYSVLAKGTKRAPPVMCVAAC 94
S D K + EI+ +L+ + + Y + I E+M YS+LA G KR P++
Sbjct: 2 SLNLDFKVQKEQKVREIEDSLQNYLPKQKGYQKIIMEAMGYSLLA-GGKRLRPMLMKETY 60
Query: 95 ELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDA 154
LFG + P A+EMVH SL+HDDLP MD+D RRG+ + H VYG D+AILAGDA
Sbjct: 61 TLFGGHSKVIEPFMAAIEMVHTYSLVHDDLPAMDNDEYRRGRKTTHVVYGEDMAILAGDA 120
Query: 155 LFPLGFQHIVSH---TPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG-----EPN 206
L F+ V P + +RV+ E A G GM GQ +D++ +
Sbjct: 121 LLNYAFETAVKAFVLEPEDSMTIGNAIRVLGEKA---GIYGMLGGQVIDVKETGHAVSKD 177
Query: 207 LVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT- 265
+++ + E K G + E + + G L GA +E++++ R VG+ +QV DDIL+ +
Sbjct: 178 VLDTIYELKTGALIEAAMMIGAILGGASQEEVKTVERIASLVGLAFQVQDDILDVISTQE 237
Query: 266 ----PRDEEKKKKKGKSYVAFYGVEKAMEVAEE 294
P ++K +K +YV G++ A +V EE
Sbjct: 238 ELGKPIHSDEKNEK-TTYVTLLGIDDAKKVVEE 269
>gi|389809734|ref|ZP_10205456.1| farnesyl-diphosphate synthase [Rhodanobacter thiooxydans LCS2]
gi|388441633|gb|EIL97895.1| farnesyl-diphosphate synthase [Rhodanobacter thiooxydans LCS2]
Length = 299
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 149/299 (49%), Gaps = 16/299 (5%)
Query: 41 DLKTYWTTLITEIDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
+L +LI +Q L++ + + P +++ +MRY+VL G KR P++ A G
Sbjct: 6 ELGPALQSLIERAEQALDRHLPPAGQSPTELHRAMRYAVLGGG-KRLRPLLVYATAHALG 64
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
+ ACA+E++HA SL+HDDLP MDDD RRG+P+ H V+G +AILAGDAL L
Sbjct: 65 EDGPQLDAAACAVELIHAYSLVHDDLPAMDDDALRRGRPTCHVVFGEAMAILAGDALQAL 124
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQE 213
F I++ + ++ + A G+ GMA GQ LDL +E +
Sbjct: 125 AFG-ILAEDAARRTDAATGIAMLRALGHACGAEGMAGGQALDLAAVGQTLTLGELEHMHA 183
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP---RDEE 270
K G + S G AG D+ +Q+L RY AVG+ +QV DDIL+ + ++ +
Sbjct: 184 CKTGALIRASVQLGALAAGTDEGTLQALDRYAHAVGLAFQVRDDILDVEGESAVIGKTAG 243
Query: 271 KKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
K K ++ + G++ + EL A L F GD + L YAA R +
Sbjct: 244 KDAAAAKPTFPSIIGLDASRARLAELTDTA---LAAFAPLGDRAVLLEELARYAAHRRY 299
>gi|336434726|ref|ZP_08614448.1| hypothetical protein HMPREF0988_00033 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336008505|gb|EGN38521.1| hypothetical protein HMPREF0988_00033 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 296
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/270 (35%), Positives = 139/270 (51%), Gaps = 18/270 (6%)
Query: 52 EIDQNLEKAITVKYPEQ--IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTAC 109
+I+Q L + + EQ I E+M YS+LA G KR P++ LFG P
Sbjct: 13 QIEQILRRFLPEAKGEQRLIMEAMEYSLLA-GGKRLRPMLMWETYRLFGGKGSVVEPFMA 71
Query: 110 ALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPP 169
A+EM+H SL+HDDLP MD+D RRG+ + H VYG D+ ILAGDAL F+
Sbjct: 72 AMEMIHTYSLVHDDLPAMDNDEYRRGRKTTHVVYGEDMGILAGDALLNYAFETASQAFDL 131
Query: 170 HLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLE-------GEPNLVEFVQEKKFGEMSEC 222
RV + + +A+ G GM GQ +D++ GE L F+ E K G + E
Sbjct: 132 EDTDFLRVGKAMQILAKKAGIYGMIGGQVVDVKAAGEAISGEKLL--FIYELKTGALIES 189
Query: 223 SAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGK 277
+ + G LAGAD+ + S+ R + VG+ +Q+ DDIL+ P ++K +K
Sbjct: 190 AMMIGAVLAGADEAQTASVERIAKKVGLAFQIQDDILDVTGSQEVLGKPIHSDEKNEK-T 248
Query: 278 SYVAFYGVEKAMEVAEELRAKAKEELDRFK 307
+YV + G+E + E L +A EEL K
Sbjct: 249 TYVTWKGLEASRAEVERLSKEAVEELRGLK 278
>gi|330814378|ref|YP_004358617.1| octaprenyl-diphosphate
synthase/Dimethylallyltransferase/Geranyltranstransferas
e [Candidatus Pelagibacter sp. IMCC9063]
gi|327487473|gb|AEA81878.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Candidatus
Pelagibacter sp. IMCC9063]
Length = 293
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 145/267 (54%), Gaps = 15/267 (5%)
Query: 64 KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDD 123
K +++E+M Y + A G K+ + VAA +LF + A A A+E VH+ SLIHDD
Sbjct: 27 KQNNELFEAMGYGLFA-GGKKIRSYLTVAAFDLFDIKEETAIAVAAAIECVHSYSLIHDD 85
Query: 124 LPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAE 183
LP MD+D RRG+ S H +G AILAG++L + F+ I++ +L E + V A
Sbjct: 86 LPSMDNDDFRRGKESTHKKFGESTAILAGNSLLTIAFE-ILTSNHLNLDKEVKSDLVFA- 143
Query: 184 IARAVGSTGMAAGQFLDL--EG---EPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEI 238
+A G G+A GQFLDL EG + + +Q KK GE+ +A ++D
Sbjct: 144 LASCSGHLGIAGGQFLDLSFEGKAQDEKTIIHMQNKKTGELMGFCTEAAAIVAKKNNDR- 202
Query: 239 QSLRRYGRAVGVLYQVVDDILEA-----KAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAE 293
+ L++ G +G+L+Q+ DD+L+ K P ++ KK K + +A +G++K +A
Sbjct: 203 EELKKIGLDIGLLFQIADDLLDVYGDQNKLGKPSKQDDKKGKA-TLIATFGLDKTNVLAN 261
Query: 294 ELRAKAKEELDRFKKYGDNVLPLYSFI 320
EL K K+ L+++ + +L FI
Sbjct: 262 ELHDKIKQSLEKYGTKANRLLSSAEFI 288
>gi|410667961|ref|YP_006920332.1| polyprenyl synthetase [Thermacetogenium phaeum DSM 12270]
gi|409105708|gb|AFV11833.1| polyprenyl synthetase [Thermacetogenium phaeum DSM 12270]
Length = 295
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/240 (40%), Positives = 134/240 (55%), Gaps = 17/240 (7%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
YP I+E+MRYS A G KR V+ +A + G+ P A A+EM+H SLIHDDL
Sbjct: 28 YPPVIHEAMRYSSFAGG-KRLRGVLTLATAGMLGLEEERVLPAAAAIEMIHTYSLIHDDL 86
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MDDD RRG+P+ H V+G IAILAGDAL L F+ +S VL+VI E+
Sbjct: 87 PAMDDDDYRRGRPTCHRVFGEAIAILAGDALLTLAFE-TLSRLAEGGFASSVVLQVIQEV 145
Query: 185 ARAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A GS G+ GQ +DLE E +++E++ K G + + G LAGA D E+
Sbjct: 146 ASGAGSRGLVGGQVVDLESEGKDIEASVLEYIHRHKTGALFRAAIRSGAILAGAGDKELT 205
Query: 240 SLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVA 292
+L Y A G+ +Q+ DDIL+ +E+ KK G+ +Y +G++KA E+A
Sbjct: 206 ALTGYAEAFGLAFQITDDILDLAGS---EEKLGKKTGRDLARGKVTYPGLFGMKKAREMA 262
>gi|217970189|ref|YP_002355423.1| polyprenyl synthetase [Thauera sp. MZ1T]
gi|217507516|gb|ACK54527.1| Polyprenyl synthetase [Thauera sp. MZ1T]
Length = 302
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 156/300 (52%), Gaps = 27/300 (9%)
Query: 46 WTTLITEIDQNLEKAITVKYPE------QIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
WT +I Q E A+ P+ +++E+MRY+VL G KR P++ AA L G
Sbjct: 13 WTA---QIQQRTEVALAGVLPDAAIAPHRLHEAMRYAVLGGG-KRVRPLLAHAAGALAGA 68
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
ACA+E++HA SL+HDDLPCMDDD RRG+P+ H + A+LAGDAL L
Sbjct: 69 AAEDLDRIACAVELIHAYSLVHDDLPCMDDDVLRRGKPTVHVEFDEATALLAGDALQTLA 128
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLE------GEPNLVEFVQE 213
FQ +++ P P + L ++ ++A A GS GMA GQ +DL G L EF+
Sbjct: 129 FQ-VLAERPLGTDPANQ-LAMLNQLAIASGSRGMAGGQAIDLASVGKRLGREEL-EFMHI 185
Query: 214 KKFGEMSECSAVCGGFLAGA-DDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKK 272
K G + + + G G DE L Y + VG+L+QVVDD+L+A+A T +
Sbjct: 186 HKTGALIRAAVLLGARAGGTLGADEHARLDHYAKVVGLLFQVVDDLLDAEADTATLGKTA 245
Query: 273 KKKGK----SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
K +YV+ G+ A +AEE+ +A+ L + +G L L DY R F
Sbjct: 246 GKDADNDKPTYVSLLGLVDARRLAEEMLDEARASL---RPFGARALRLEQLADYIVHRAF 302
>gi|451942599|ref|YP_007463236.1| geranyltranstransferase [Bartonella vinsonii subsp. berkhoffii str.
Winnie]
gi|451901986|gb|AGF76448.1| geranyltranstransferase [Bartonella vinsonii subsp. berkhoffii str.
Winnie]
Length = 300
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 158/305 (51%), Gaps = 32/305 (10%)
Query: 46 WTTLITEIDQNLEKAI-----------TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAAC 94
+TTL+ + +++EK + + PE + ++MRY VL G KR P + + +
Sbjct: 4 FTTLLAQHGRSVEKRLDALLSNKIESGEIARPEILLKAMRYGVL-NGGKRLRPFLVIQSG 62
Query: 95 ELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDA 154
LF + + ACALE VH SLIHDDLP MD+D RRG+P+ H + AILAG+A
Sbjct: 63 ALFDIPPEHSLDVACALECVHCYSLIHDDLPAMDNDTLRRGKPTVHKAFDEATAILAGNA 122
Query: 155 LFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFV--- 211
L F+ I++H L E R+ +++ +A++ G GM GQ LD+E E E +
Sbjct: 123 LLTFAFE-IIAHKACALPFETRI-KLMTALAQSAGLGGMIGGQMLDIEAEKTPQESINIM 180
Query: 212 --QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP--- 266
Q K + + G + A + ++ L +G +G+ +Q+ DD+L+ A +
Sbjct: 181 TLQRMKTAALISFACQAGAIIGNAPQELMEKLAAFGTYLGLAFQLTDDLLDVTANSEVLG 240
Query: 267 ----RDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
+DE +K ++V YG+++ + +EL AKA+ L + +G+ PL+ +
Sbjct: 241 KTAGKDETAQK---ATFVRLYGIQETQKKRDELIAKAESLL---RPFGEKAKPLHQAAHF 294
Query: 323 AADRE 327
+A R+
Sbjct: 295 SATRK 299
>gi|260752677|ref|YP_003225570.1| polyprenyl synthetase [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|258552040|gb|ACV74986.1| Polyprenyl synthetase [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 298
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 151/296 (51%), Gaps = 20/296 (6%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYP------EQIYESMRYSVLAKGTKRAPPVMCVAACE 95
+ T++ ++ Q++++ + P ++ E+MRY+ + G KR P++ A C
Sbjct: 1 MAVNLKTMMEQVAQDIDRLFAEQLPVPEDPRRRLVEAMRYAAIG-GGKRLRPLLVAATCA 59
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
LF V+R AA A+E +H SLIHDD+PCMD+D RRG+P+ H + A+L+GDAL
Sbjct: 60 LFNVDREAALRVGMAIECIHVYSLIHDDMPCMDNDDLRRGKPTVHKAFDDASAVLSGDAL 119
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF----- 210
L F+ I+S H P R L +I +A A G GM GQ +DL E + V F
Sbjct: 120 QALAFE-ILSEEKIHTDPHVR-LELIQALAIASGKDGMVGGQAIDLAAETSTVPFDLPTI 177
Query: 211 --VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEA---KAQT 265
+Q+ K G + G + + D L+ Y R +G+ +Q+ DD+++A +A
Sbjct: 178 TRLQQLKTGALFGFCLEAGAIMGRQNKDIRDRLKAYARDIGLAFQIADDLIDAEGDEAVA 237
Query: 266 PRDEEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+ K GK ++++ G+EKA A+ L +A L F D + + +I
Sbjct: 238 GKAVGKDAAAGKATFLSLLGLEKARSQAQALVDQAIAHLSVFGSEADYLRSIARYI 293
>gi|421496516|ref|ZP_15943744.1| ispA [Aeromonas media WS]
gi|407184504|gb|EKE58333.1| ispA [Aeromonas media WS]
Length = 296
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/271 (37%), Positives = 144/271 (53%), Gaps = 19/271 (7%)
Query: 68 QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCM 127
++ ++M+Y +L G KR P + A E+ GV A A+E +HA SL+HDDLP M
Sbjct: 31 RLRDAMKYGLLLGG-KRVRPFLVYAVGEMLGVKSELLDGPAAAVECIHAYSLLHDDLPAM 89
Query: 128 DDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARA 187
D+D RRGQP+ H + AILAGDAL L F + H P + RV R+++ +ARA
Sbjct: 90 DNDDLRRGQPTVHKAFDEGTAILAGDALQTLAFSILADHPLPDALLANRV-RMLSALARA 148
Query: 188 VGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDD--EIQS 240
G GM GQ LDLE E + E V K G + EC AV G L AD + + +
Sbjct: 149 SGYLGMCGGQALDLEAEGRRISLAELEQVHRHKTGALIEC-AVTLGALCKADVEPATLAA 207
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYVAFYGVEKAMEVAEEL 295
L+ Y A+G+ +QV DDIL+ T P+ + ++K +Y A G++ A E+A EL
Sbjct: 208 LQTYAAAIGLAFQVQDDILDITGDTATLGKPQGSDLAQEK-STYPALLGLDPARELAREL 266
Query: 296 RAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
KA L Y ++L +F DY +R
Sbjct: 267 HDKALTALQSL-PYNTDILE--AFADYIIER 294
>gi|451812231|ref|YP_007448685.1| farnesyl diphosphate synthase [Candidatus Kinetoplastibacterium
galatii TCC219]
gi|451778133|gb|AGF49081.1| farnesyl diphosphate synthase [Candidatus Kinetoplastibacterium
galatii TCC219]
Length = 305
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/309 (33%), Positives = 158/309 (51%), Gaps = 28/309 (9%)
Query: 35 LRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQI---YESMRYSVLAKGTK-RAPPV-- 88
+ T+ + I I+ NLEK + ++ E+M+YS L+ G + RA V
Sbjct: 1 MNKNNLSFSTWISNNIKNINDNLEKILQNHQDAKLSVLQEAMKYSTLSDGKRIRALLVHA 60
Query: 89 --MCVAACELFGVNRIAAF-PTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGV 145
+ C + + + + A A+E++H+ SLIHDDLP MD+D RRG+PSNH V+G
Sbjct: 61 SFLAAHGCLMEKDDVLLSIDKAAIAIELIHSYSLIHDDLPVMDNDCMRRGKPSNHIVFGE 120
Query: 146 DIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP 205
IAILAGD+L L F+ I T + E R+ +I +A + G GMA GQ +DL
Sbjct: 121 AIAILAGDSLQSLAFELI---TCIPISYEIRI-NLIKNLAESAGYLGMAGGQAIDLTNMG 176
Query: 206 NLVEFVQEK-----KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILE 260
N + + + K K G + CS G LAGA+ L + +G+++Q+VDDIL+
Sbjct: 177 NNISYEELKNMHSMKTGAIIACSIKFGYILAGANQVVKCILDEFAYHLGIIFQIVDDILD 236
Query: 261 AKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNV 313
T D++ K GK +YV+ +GV K+ ++ E+LR KA + + +
Sbjct: 237 V---TSDDKQLGKTAGKDSKYNKPTYVSMFGVMKSRKMLEKLRDKAINIIKPLGLSNNRL 293
Query: 314 LPLYSFIDY 322
L + I Y
Sbjct: 294 LEMLDLIIY 302
>gi|385812516|ref|YP_005848907.1| geranyltranstransferase [Lactobacillus fermentum CECT 5716]
gi|299783413|gb|ADJ41411.1| Geranyltranstransferase [Lactobacillus fermentum CECT 5716]
Length = 311
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/249 (35%), Positives = 126/249 (50%), Gaps = 18/249 (7%)
Query: 71 ESMRYSVLAKGTKRAPPVMCVAACELFGVN-RIAAFPTACALEMVHAASLIHDDLPCMDD 129
+SM YS+LA G KR P + +A EL G ACALE++H SLIHDDLP MD+
Sbjct: 31 KSMAYSLLAGG-KRLRPTLTIAVAELLGKTIDDDLVRAACALELIHTYSLIHDDLPAMDN 89
Query: 130 DPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVG 189
D RRG+P+NH VYG +A LAGD L L F+ + + + P LR++ E+A+A G
Sbjct: 90 DDLRRGKPTNHRVYGPGVATLAGDGLLTLAFEWVSDNQ----LKAPVRLRLVQELAKAAG 145
Query: 190 STGMAAGQFLDLEGEPNLVEFVQEKKF-----GEMSECSAVCGGFLAGADDDEIQSLRRY 244
GM AGQ D+ + Q KK G + + + GG +A + + L +
Sbjct: 146 PAGMVAGQATDVSATGQELSLAQLKKLHRQKTGALLRYAVLAGGLIAEQETAVLDCLTTF 205
Query: 245 GRAVGVLYQVVDDILEAKAQTP-------RDEEKKKKKGKSYVAFYGVEKAMEVAEELRA 297
G A G+ +Q+ DDIL+ A T +D+ ++K + G + +E A
Sbjct: 206 GEAYGLAFQIYDDILDVTATTAEMGKATHKDQAEQKNTYPGLLGLAGAKGELEAALTTAR 265
Query: 298 KAKEELDRF 306
A EL R
Sbjct: 266 GAAAELGRL 274
>gi|154502459|ref|ZP_02039519.1| hypothetical protein RUMGNA_00272 [Ruminococcus gnavus ATCC 29149]
gi|153796855|gb|EDN79275.1| Gram-positive signal peptide protein, YSIRK family [Ruminococcus
gnavus ATCC 29149]
Length = 300
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/249 (36%), Positives = 132/249 (53%), Gaps = 20/249 (8%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
Y E I ++M YS+LA G KR P++ LFG P A+EM+H SL+HDDL
Sbjct: 32 YQEVIMDAMSYSMLA-GGKRLRPMLMQETYRLFGGADSVIEPFMAAIEMIHTYSLVHDDL 90
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVL--RVIA 182
P MD+D RRG+ + H VYG D+ IL GDAL F+ + + PE +L + I
Sbjct: 91 PAMDNDEYRRGRKTTHVVYGEDMGILTGDALLNYAFE--TAASAFETAPEKSLLIGKAIR 148
Query: 183 EIARAVGSTGMAAGQFLD-------LEGEPNLVEFVQEKKFGEMSECSAVCGGFLAGADD 235
+ + G GM GQ +D ++GE +EF+ K G + E S + G LAGADD
Sbjct: 149 ILGQKAGIYGMIGGQVVDVKSSGKKIDGEK--LEFIYRLKTGALIEASMMIGAVLAGADD 206
Query: 236 DEIQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYVAFYGVEKAME 290
+ +Q + VG+ +Q+ DDIL+ + T P ++K +K +YV + G++ A +
Sbjct: 207 ESVQVVEEIAAKVGMAFQIQDDILDVISTTEVLGKPVHSDEKNEK-MTYVVWKGLDAAKQ 265
Query: 291 VAEELRAKA 299
E L KA
Sbjct: 266 EVEHLSRKA 274
>gi|170691118|ref|ZP_02882284.1| Polyprenyl synthetase [Burkholderia graminis C4D1M]
gi|170144367|gb|EDT12529.1| Polyprenyl synthetase [Burkholderia graminis C4D1M]
Length = 293
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 150/288 (52%), Gaps = 18/288 (6%)
Query: 46 WT-TLITEIDQNLEKAITVKY--PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRI 102
WT +++ ++ LE + + P +++E+MRY+VL G KR P++C AA EL G
Sbjct: 6 WTRSVLERVEAALEHYLPAETTEPAKLHEAMRYAVLGGG-KRVRPLLCHAAGELTGARAE 64
Query: 103 AAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQH 162
A ALEM+H SL+HDD+PCMDDD RRG+P+ H Y A+L GDAL F
Sbjct: 65 CLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQAF-- 122
Query: 163 IVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEMSEC 222
VS T L P + ++ E+A A GS GM GQ +DL + + Q + M
Sbjct: 123 -VSLTSDVLAPAQQA-ALVRELALASGSIGMCGGQAIDLASVGHTLTRAQLETMHRMKTG 180
Query: 223 ----SAVCGGFLAGA--DDDEIQSLRRYGRAVGVLYQVVDDILEA---KAQTPRDEEKKK 273
+AV G LAG D + ++SL Y AVG+ +QVVDDIL+ A + K
Sbjct: 181 ALLRAAVRMGALAGEAPDANAMRSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGKDA 240
Query: 274 KKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
K GK +YV+ G++ + +A +LR+ A L F + L +
Sbjct: 241 KDGKPTYVSIIGLDASRSLAAQLRSDAHAALAPFGARAQRLAELADLV 288
>gi|89148075|gb|ABC46867.3| geranylgeranyl diphosphate synthase [Stevia rebaudiana]
Length = 147
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 100/149 (67%), Gaps = 7/149 (4%)
Query: 113 MVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLV 172
M+H SL+HDDLPC+D+D RRG+P++H VYG ++A+L GDAL L F+HI + T V
Sbjct: 1 MIHTMSLVHDDLPCVDNDDFRRGKPTSHKVYGEEMAVLTGDALLSLSFEHIATATKG--V 58
Query: 173 PEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCG 227
+ R++RVI E+AR+VGS G+ AGQ +D+ E + +E++ K + E S V G
Sbjct: 59 SKDRIVRVIGELARSVGSEGLVAGQVVDILSEGADVGLDHLEYIHIHKTAMLLESSVVIG 118
Query: 228 GFLAGADDDEIQSLRRYGRAVGVLYQVVD 256
+ G D +I+ LR++ R++G+L+QVVD
Sbjct: 119 AIMGGGSDQQIEKLRKFARSIGLLFQVVD 147
>gi|91974793|ref|YP_567452.1| polyprenyl synthetase [Rhodopseudomonas palustris BisB5]
gi|91681249|gb|ABE37551.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisB5]
Length = 321
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 153/323 (47%), Gaps = 20/323 (6%)
Query: 10 NPPCVCLPRKFPVRCSSLPVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQI 69
N P F + + + A +L +T D + L++ D L IT P ++
Sbjct: 2 NGPAEFYLEHFRMATGTSTIDFAKRLDTTAEDTEALLGRLLS--DDLLPDEIT--RPRRL 57
Query: 70 YESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDD 129
E++RY+ L G KR P + V + +FGV R +A ALE +H SLIHDDLP MD+
Sbjct: 58 MEAIRYATLGGG-KRLRPFLAVESAAVFGVERASALLVGAALECIHCYSLIHDDLPAMDN 116
Query: 130 DPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVG 189
RRG+P+ H Y AILAGDAL F I++ H P+ R L + +AR G
Sbjct: 117 SDLRRGRPTLHKAYDDATAILAGDALLTFAFD-IITRDEVHRDPQVR-LDLNRVLARCAG 174
Query: 190 STGMAAGQFLDLEG-------EPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLR 242
GM GQ LDL G EP V +Q+ K G + V G L A + ++L
Sbjct: 175 LGGMVGGQILDLAGEGRFGDREPVDVARLQQMKTGALLRYGCVAGAILGEAPPEHYRALD 234
Query: 243 RYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYVAFYGVEKAMEVAEELRA 297
YGRA+G +Q+ DD+L+ + P + K ++V G++ A + +L
Sbjct: 235 DYGRALGEAFQIADDLLDVEGDAAALGKPAGADAALGK-TTFVTQLGIDGAKQRVRDLLV 293
Query: 298 KAKEELDRFKKYGDNVLPLYSFI 320
+A E L F GD + F+
Sbjct: 294 RADEALAPFGAKGDVLRAAARFV 316
>gi|338707402|ref|YP_004661603.1| polyprenyl synthetase [Zymomonas mobilis subsp. pomaceae ATCC
29192]
gi|336294206|gb|AEI37313.1| Polyprenyl synthetase [Zymomonas mobilis subsp. pomaceae ATCC
29192]
Length = 300
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 155/298 (52%), Gaps = 20/298 (6%)
Query: 38 TQFDLKTYWTTLITEIDQNLEKAITVKYPE----QIYESMRYSVLAKGTKRAPPVMCVAA 93
T +LKT + +ID+ +K +++ PE ++ E+MRY+ + G KR P++ VA
Sbjct: 3 TVHNLKTAMEQVAQDIDELFDKQLSI--PEDPRTRLIEAMRYAAIG-GGKRLRPLLVVAT 59
Query: 94 CELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGD 153
C LF V+R AA A+E +H SLIHDD+PCMD+D RRG+P+ H + A+L+GD
Sbjct: 60 CALFNVDRKAALRVGLAIECIHVYSLIHDDMPCMDNDDLRRGKPTVHKAFDDASAVLSGD 119
Query: 154 ALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF--- 210
AL L F+ I++ H P R L ++ +A A G GM GQ +DL E + F
Sbjct: 120 ALQALAFE-ILADEQIHADPNVR-LELVKALAIASGKDGMVGGQAIDLAAETSAEPFDLP 177
Query: 211 ----VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEA---KA 263
+Q+ K G + G + + D L+ Y R +G+ +Q+ DD+++A +A
Sbjct: 178 TITRLQQLKTGALFGFCLEAGAIMGRQNKDVRDRLKAYARDIGLAFQIADDLIDAEGDEA 237
Query: 264 QTPRDEEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+ K GK ++++ G+EKA A L +A L F + D + + +I
Sbjct: 238 IAGKAVGKDAAAGKATFLSLLGLEKARSQATALVDQAIAHLSIFGEEADFLRGIARYI 295
>gi|37527745|ref|NP_931090.1| geranyltranstransferase [Photorhabdus luminescens subsp. laumondii
TTO1]
gi|36787181|emb|CAE16258.1| geranyltranstransferase (farnesyl-diphosphate synthase) FPP
synthase) [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 305
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 156/303 (51%), Gaps = 19/303 (6%)
Query: 33 SQLRSTQF--DLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMC 90
S+ STQF LK + + L P + +M++ L G KR P +
Sbjct: 2 SEQNSTQFKEQLKICQQRVNNVLISTLSSVAFANNP--LVHAMQHGTLLGG-KRLRPFLV 58
Query: 91 VAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAIL 150
A E+FG++ A A+E +HA SLIHDDLP MD+D RRGQP+ H +G AIL
Sbjct: 59 YAVGEMFGLSANNLDAPAAAVECIHAFSLIHDDLPAMDNDDLRRGQPTCHIKFGEAHAIL 118
Query: 151 AGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP----- 205
AGDAL L F+ + P + R L ++AE+A A G GM GQ LDL E
Sbjct: 119 AGDALQALAFEILSKREMPDVTTADR-LEMVAELATASGIAGMCGGQALDLAAEGRHIDL 177
Query: 206 NLVEFVQEKKFGEMSECSAVCGGFLAG-ADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQ 264
+++E + K G + C+ G + AG + D + L +Y +A+G+ +QV DDIL+
Sbjct: 178 HMLEQIHRHKTGALIRCAVRMGAYGAGQSGHDALPELDQYAQAIGLAFQVQDDILDVIGD 237
Query: 265 TP---RDEEKKKKKGKS-YVAFYGVEKAMEVAEELRAKAKEELDRF--KKYGDNVL-PLY 317
T + + ++ GKS Y A G+E+A + A EL +A + L++ K Y +L L
Sbjct: 238 TEMIGKRQGSDQQLGKSTYPALLGLEQAQKKAYELYQEALKALNKLEDKSYNTTMLRALA 297
Query: 318 SFI 320
SFI
Sbjct: 298 SFI 300
>gi|423713466|ref|ZP_17687726.1| hypothetical protein ME1_00472 [Bartonella vinsonii subsp.
arupensis OK-94-513]
gi|395423507|gb|EJF89702.1| hypothetical protein ME1_00472 [Bartonella vinsonii subsp.
arupensis OK-94-513]
Length = 300
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 154/305 (50%), Gaps = 32/305 (10%)
Query: 46 WTTLITEIDQNLEKAI-----------TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAAC 94
+TTL+ +++EK + + PE + ++MRY VL G KR P + + +
Sbjct: 4 FTTLLATHGRSVEKRLDGLLNNKIENGEIARPEILLKAMRYGVL-NGGKRLRPFLVIQSG 62
Query: 95 ELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDA 154
LF + + ACALE VH SLIHDDLP MD+D RRGQP+ H + AILAG+A
Sbjct: 63 ALFDIPPEHSLDVACALECVHCYSLIHDDLPAMDNDTLRRGQPTVHKAFDEATAILAGNA 122
Query: 155 LFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVE----- 209
L F+ I++H L E R+ ++I +A++ G GM GQ LD+E E E
Sbjct: 123 LLTFAFE-IIAHKAFALSFETRI-KLITALAQSAGLGGMIGGQMLDIEAEKTPQESTNIM 180
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
+Q K + + G ++ A + + L +G +G+ +Q+ DD+L+ A + E
Sbjct: 181 TLQRMKTAALISFACQAGAIISNASQELTEKLAAFGTYLGLAFQLTDDLLDVTASS---E 237
Query: 270 EKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
+ K GK ++V YG+++ + +EL AKA+ L F G+ PL +
Sbjct: 238 DLGKTAGKDETAQKATFVRLYGIKETQKKRDELIAKAESLLHSF---GEKAKPLQQAAHF 294
Query: 323 AADRE 327
+ R+
Sbjct: 295 SVTRK 299
>gi|153814704|ref|ZP_01967372.1| hypothetical protein RUMTOR_00919 [Ruminococcus torques ATCC 27756]
gi|317500234|ref|ZP_07958464.1| geranyltranstransferase [Lachnospiraceae bacterium 8_1_57FAA]
gi|331087536|ref|ZP_08336468.1| hypothetical protein HMPREF1025_00051 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336439981|ref|ZP_08619581.1| hypothetical protein HMPREF0990_01975 [Lachnospiraceae bacterium
1_1_57FAA]
gi|145847735|gb|EDK24653.1| polyprenyl synthetase [Ruminococcus torques ATCC 27756]
gi|316898360|gb|EFV20401.1| geranyltranstransferase [Lachnospiraceae bacterium 8_1_57FAA]
gi|330401754|gb|EGG81332.1| hypothetical protein HMPREF1025_00051 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336014566|gb|EGN44411.1| hypothetical protein HMPREF0990_01975 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 296
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/257 (35%), Positives = 135/257 (52%), Gaps = 18/257 (7%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
+ + I E+M YS++A G KR P++ +LFG P A+EM+H SL+HDDL
Sbjct: 28 HQQIIEEAMEYSLMA-GGKRLRPMLMKETFDLFGGKGGVIEPFMAAIEMIHTYSLVHDDL 86
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVS---HTPPHLVPEPRVLRVI 181
P MD+D RRG+ + H VYG D+ IL GDAL F+ S P + + R L+++
Sbjct: 87 PAMDNDDYRRGRKTTHVVYGEDMGILTGDALLNYAFETACSAFETDPQNSILIGRALKIL 146
Query: 182 AEIARAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAGADDD 236
A A G GM GQ +D+ L+ F+ K G + E S + G LAGA ++
Sbjct: 147 AGKA---GIYGMIGGQVVDVRSAGCKISGELLAFIYRLKTGALIEASVMIGAVLAGAKEE 203
Query: 237 EIQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYVAFYGVEKAMEV 291
EI + +G+ +Q+ DDIL+ + T P ++K +K +YV + G+EKA E
Sbjct: 204 EIGKMEEIAGKIGLAFQIQDDILDVTSTTEILGKPVHSDEKNEK-TTYVTWKGLEKAKEE 262
Query: 292 AEELRAKAKEELDRFKK 308
A L +A EEL K
Sbjct: 263 AARLTEEAVEELRSIGK 279
>gi|376261504|ref|YP_005148224.1| geranylgeranyl pyrophosphate synthase [Clostridium sp. BNL1100]
gi|373945498|gb|AEY66419.1| geranylgeranyl pyrophosphate synthase [Clostridium sp. BNL1100]
Length = 294
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 143/274 (52%), Gaps = 21/274 (7%)
Query: 46 WTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG--VNRIA 103
+ +I E N+ + Y E I E+M YS+LA G KR P++ +A E+ +N +
Sbjct: 10 YVNMIEERLHNIIPEVNGYYLE-IKEAMSYSLLA-GGKRLRPLLALAVAEMLDKPLNEVI 67
Query: 104 AFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHI 163
F CA+EM+H SLIHDDLP MD+D RRG+P+NH V+G +AILAGD L + ++ +
Sbjct: 68 NF--GCAIEMIHTYSLIHDDLPAMDNDDYRRGKPTNHKVFGEAMAILAGDGLLNMAYEIM 125
Query: 164 VSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVE-----FVQEKKFGE 218
++ T E +R +A+A G+ GM GQ +DL+ E +E + K G
Sbjct: 126 INDTVESNSIEK--MRAAGIVAKAAGALGMVGGQVIDLQSEGKTIESDRLKTMHRLKTGA 183
Query: 219 MSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL------EAKAQTPRDEEKK 272
+ + + GAD E + L Y +G+ +Q+ DDIL E + P ++
Sbjct: 184 LIKAPVEAAAVICGADKKEFELLSGYAANLGLAFQIKDDILDIEGTVENMGKNPGNDSSC 243
Query: 273 KKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRF 306
K +YV YG+E++ ++ E + + L+ F
Sbjct: 244 NK--STYVTMYGLEESKKLLETVTQEGISCLEAF 275
>gi|69244725|ref|ZP_00602989.1| Polyprenyl synthetase [Enterococcus faecium DO]
gi|257879355|ref|ZP_05659008.1| polyprenyl synthetase [Enterococcus faecium 1,230,933]
gi|257881779|ref|ZP_05661432.1| polyprenyl synthetase [Enterococcus faecium 1,231,502]
gi|257890181|ref|ZP_05669834.1| polyprenyl synthetase [Enterococcus faecium 1,231,410]
gi|257893509|ref|ZP_05673162.1| polyprenyl synthetase [Enterococcus faecium 1,231,408]
gi|260558797|ref|ZP_05830986.1| polyprenyl synthetase [Enterococcus faecium C68]
gi|261206507|ref|ZP_05921207.1| polyprenyl synthetase [Enterococcus faecium TC 6]
gi|289565417|ref|ZP_06445866.1| polyprenyl synthetase [Enterococcus faecium D344SRF]
gi|293553173|ref|ZP_06673810.1| geranyltranstransferase [Enterococcus faecium E1039]
gi|293560486|ref|ZP_06676978.1| geranyltranstransferase [Enterococcus faecium E1162]
gi|293568312|ref|ZP_06679636.1| geranyltranstransferase [Enterococcus faecium E1071]
gi|294614724|ref|ZP_06694626.1| geranyltranstransferase [Enterococcus faecium E1636]
gi|294618979|ref|ZP_06698474.1| geranyltranstransferase [Enterococcus faecium E1679]
gi|294621591|ref|ZP_06700756.1| geranyltranstransferase [Enterococcus faecium U0317]
gi|314937883|ref|ZP_07845199.1| geranyltranstransferase [Enterococcus faecium TX0133a04]
gi|314941374|ref|ZP_07848267.1| geranyltranstransferase [Enterococcus faecium TX0133C]
gi|314950133|ref|ZP_07853419.1| geranyltranstransferase [Enterococcus faecium TX0082]
gi|314951326|ref|ZP_07854380.1| geranyltranstransferase [Enterococcus faecium TX0133A]
gi|314992843|ref|ZP_07858244.1| geranyltranstransferase [Enterococcus faecium TX0133B]
gi|314998047|ref|ZP_07862935.1| geranyltranstransferase [Enterococcus faecium TX0133a01]
gi|383328074|ref|YP_005353958.1| geranyltranstransferase [Enterococcus faecium Aus0004]
gi|389867964|ref|YP_006375387.1| geranyltranstransferase [Enterococcus faecium DO]
gi|406580454|ref|ZP_11055647.1| geranyltranstransferase [Enterococcus sp. GMD4E]
gi|406582711|ref|ZP_11057809.1| geranyltranstransferase [Enterococcus sp. GMD3E]
gi|406584946|ref|ZP_11059942.1| geranyltranstransferase [Enterococcus sp. GMD2E]
gi|406590329|ref|ZP_11064698.1| geranyltranstransferase [Enterococcus sp. GMD1E]
gi|410937006|ref|ZP_11368868.1| geranyltranstransferase [Enterococcus sp. GMD5E]
gi|415898413|ref|ZP_11551298.1| geranyltranstransferase [Enterococcus faecium E4453]
gi|416130948|ref|ZP_11597611.1| geranyltranstransferase [Enterococcus faecium E4452]
gi|424789415|ref|ZP_18216069.1| geranyltranstransferase [Enterococcus faecium V689]
gi|424809990|ref|ZP_18235358.1| geranyltranstransferase [Enterococcus faecium S447]
gi|424826022|ref|ZP_18250963.1| geranyltranstransferase [Enterococcus faecium R501]
gi|424859437|ref|ZP_18283445.1| geranyltranstransferase [Enterococcus faecium R499]
gi|424901173|ref|ZP_18324710.1| geranyltranstransferase [Enterococcus faecium R497]
gi|424951708|ref|ZP_18366776.1| geranyltranstransferase [Enterococcus faecium R496]
gi|424955118|ref|ZP_18369978.1| geranyltranstransferase [Enterococcus faecium R494]
gi|424958642|ref|ZP_18373278.1| geranyltranstransferase [Enterococcus faecium R446]
gi|424959581|ref|ZP_18374159.1| geranyltranstransferase [Enterococcus faecium P1986]
gi|424964082|ref|ZP_18378223.1| geranyltranstransferase [Enterococcus faecium P1190]
gi|424969197|ref|ZP_18382780.1| geranyltranstransferase [Enterococcus faecium P1140]
gi|424971967|ref|ZP_18385364.1| geranyltranstransferase [Enterococcus faecium P1139]
gi|424973311|ref|ZP_18386599.1| geranyltranstransferase [Enterococcus faecium P1137]
gi|424977759|ref|ZP_18390744.1| geranyltranstransferase [Enterococcus faecium P1123]
gi|424982062|ref|ZP_18394745.1| geranyltranstransferase [Enterococcus faecium ERV99]
gi|424985835|ref|ZP_18398295.1| geranyltranstransferase [Enterococcus faecium ERV69]
gi|424988398|ref|ZP_18400720.1| geranyltranstransferase [Enterococcus faecium ERV38]
gi|424990609|ref|ZP_18402815.1| geranyltranstransferase [Enterococcus faecium ERV26]
gi|424994745|ref|ZP_18406671.1| geranyltranstransferase [Enterococcus faecium ERV168]
gi|424998839|ref|ZP_18410502.1| geranyltranstransferase [Enterococcus faecium ERV165]
gi|425001826|ref|ZP_18413311.1| geranyltranstransferase [Enterococcus faecium ERV161]
gi|425004788|ref|ZP_18416073.1| geranyltranstransferase [Enterococcus faecium ERV102]
gi|425007859|ref|ZP_18418974.1| geranyltranstransferase [Enterococcus faecium ERV1]
gi|425009743|ref|ZP_18420737.1| geranyltranstransferase [Enterococcus faecium E422]
gi|425014516|ref|ZP_18425190.1| geranyltranstransferase [Enterococcus faecium E417]
gi|425019176|ref|ZP_18429562.1| geranyltranstransferase [Enterococcus faecium C621]
gi|425019585|ref|ZP_18429933.1| geranyltranstransferase [Enterococcus faecium C497]
gi|425023856|ref|ZP_18433951.1| geranyltranstransferase [Enterococcus faecium C1904]
gi|425031148|ref|ZP_18436291.1| geranyltranstransferase [Enterococcus faecium 515]
gi|425036608|ref|ZP_18441350.1| geranyltranstransferase [Enterococcus faecium 514]
gi|425039735|ref|ZP_18444239.1| geranyltranstransferase [Enterococcus faecium 513]
gi|425043104|ref|ZP_18447373.1| geranyltranstransferase [Enterococcus faecium 511]
gi|425045128|ref|ZP_18449247.1| geranyltranstransferase [Enterococcus faecium 510]
gi|425048694|ref|ZP_18452585.1| geranyltranstransferase [Enterococcus faecium 509]
gi|425052463|ref|ZP_18456068.1| geranyltranstransferase [Enterococcus faecium 506]
gi|425058723|ref|ZP_18462099.1| geranyltranstransferase [Enterococcus faecium 504]
gi|425061084|ref|ZP_18464349.1| geranyltranstransferase [Enterococcus faecium 503]
gi|427395425|ref|ZP_18888347.1| hypothetical protein HMPREF9307_00523 [Enterococcus durans
FB129-CNAB-4]
gi|430826908|ref|ZP_19445076.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0164]
gi|430831521|ref|ZP_19449572.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0333]
gi|430833740|ref|ZP_19451751.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0679]
gi|430837050|ref|ZP_19455026.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0680]
gi|430839128|ref|ZP_19457070.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0688]
gi|430844792|ref|ZP_19462689.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1050]
gi|430846872|ref|ZP_19464726.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1133]
gi|430851060|ref|ZP_19468816.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1185]
gi|430856759|ref|ZP_19474443.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1392]
gi|430859661|ref|ZP_19477270.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1552]
gi|430862413|ref|ZP_19479730.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1573]
gi|430963191|ref|ZP_19487483.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1576]
gi|431011109|ref|ZP_19489853.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1578]
gi|431185971|ref|ZP_19500034.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1620]
gi|431237102|ref|ZP_19503245.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1622]
gi|431264037|ref|ZP_19505925.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1623]
gi|431290521|ref|ZP_19506656.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1626]
gi|431382781|ref|ZP_19511374.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1627]
gi|431523789|ref|ZP_19516814.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1634]
gi|431536430|ref|ZP_19517390.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1731]
gi|431677783|ref|ZP_19524381.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1904]
gi|431747892|ref|ZP_19536656.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2297]
gi|431754081|ref|ZP_19542746.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2883]
gi|431765964|ref|ZP_19554463.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E4215]
gi|431768767|ref|ZP_19557200.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1321]
gi|431770059|ref|ZP_19558462.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1644]
gi|431774413|ref|ZP_19562721.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2369]
gi|431777032|ref|ZP_19565289.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2560]
gi|431779298|ref|ZP_19567493.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E4389]
gi|431781339|ref|ZP_19569487.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E6012]
gi|431784970|ref|ZP_19573005.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E6045]
gi|447913372|ref|YP_007394784.1| Octaprenyl-diphosphate synthase, Dimethylallyltransferase,
Geranyltranstransferase [Enterococcus faecium NRRL
B-2354]
gi|68196316|gb|EAN10745.1| Polyprenyl synthetase [Enterococcus faecium DO]
gi|257813583|gb|EEV42341.1| polyprenyl synthetase [Enterococcus faecium 1,230,933]
gi|257817437|gb|EEV44765.1| polyprenyl synthetase [Enterococcus faecium 1,231,502]
gi|257826541|gb|EEV53167.1| polyprenyl synthetase [Enterococcus faecium 1,231,410]
gi|257829888|gb|EEV56495.1| polyprenyl synthetase [Enterococcus faecium 1,231,408]
gi|260075256|gb|EEW63569.1| polyprenyl synthetase [Enterococcus faecium C68]
gi|260079217|gb|EEW66908.1| polyprenyl synthetase [Enterococcus faecium TC 6]
gi|289162746|gb|EFD10597.1| polyprenyl synthetase [Enterococcus faecium D344SRF]
gi|291589024|gb|EFF20848.1| geranyltranstransferase [Enterococcus faecium E1071]
gi|291592462|gb|EFF24069.1| geranyltranstransferase [Enterococcus faecium E1636]
gi|291594640|gb|EFF26022.1| geranyltranstransferase [Enterococcus faecium E1679]
gi|291598756|gb|EFF29808.1| geranyltranstransferase [Enterococcus faecium U0317]
gi|291602583|gb|EFF32798.1| geranyltranstransferase [Enterococcus faecium E1039]
gi|291605634|gb|EFF35076.1| geranyltranstransferase [Enterococcus faecium E1162]
gi|313587889|gb|EFR66734.1| geranyltranstransferase [Enterococcus faecium TX0133a01]
gi|313592647|gb|EFR71492.1| geranyltranstransferase [Enterococcus faecium TX0133B]
gi|313596543|gb|EFR75388.1| geranyltranstransferase [Enterococcus faecium TX0133A]
gi|313599797|gb|EFR78640.1| geranyltranstransferase [Enterococcus faecium TX0133C]
gi|313642741|gb|EFS07321.1| geranyltranstransferase [Enterococcus faecium TX0133a04]
gi|313643574|gb|EFS08154.1| geranyltranstransferase [Enterococcus faecium TX0082]
gi|364090081|gb|EHM32712.1| geranyltranstransferase [Enterococcus faecium E4453]
gi|364093823|gb|EHM36059.1| geranyltranstransferase [Enterococcus faecium E4452]
gi|378937768|gb|AFC62840.1| geranyltranstransferase [Enterococcus faecium Aus0004]
gi|388533213|gb|AFK58405.1| geranyltranstransferase [Enterococcus faecium DO]
gi|402918223|gb|EJX38937.1| geranyltranstransferase [Enterococcus faecium S447]
gi|402922095|gb|EJX42500.1| geranyltranstransferase [Enterococcus faecium V689]
gi|402924691|gb|EJX44883.1| geranyltranstransferase [Enterococcus faecium R501]
gi|402926469|gb|EJX46505.1| geranyltranstransferase [Enterococcus faecium R499]
gi|402928929|gb|EJX48735.1| geranyltranstransferase [Enterococcus faecium R496]
gi|402931342|gb|EJX50928.1| geranyltranstransferase [Enterococcus faecium R497]
gi|402935005|gb|EJX54298.1| geranyltranstransferase [Enterococcus faecium R494]
gi|402939539|gb|EJX58444.1| geranyltranstransferase [Enterococcus faecium R446]
gi|402947496|gb|EJX65704.1| geranyltranstransferase [Enterococcus faecium P1190]
gi|402949153|gb|EJX67234.1| geranyltranstransferase [Enterococcus faecium P1140]
gi|402950095|gb|EJX68110.1| geranyltranstransferase [Enterococcus faecium P1986]
gi|402956906|gb|EJX74329.1| geranyltranstransferase [Enterococcus faecium P1139]
gi|402958947|gb|EJX76228.1| geranyltranstransferase [Enterococcus faecium P1137]
gi|402961818|gb|EJX78813.1| geranyltranstransferase [Enterococcus faecium ERV99]
gi|402964501|gb|EJX81275.1| geranyltranstransferase [Enterococcus faecium P1123]
gi|402965086|gb|EJX81824.1| geranyltranstransferase [Enterococcus faecium ERV69]
gi|402972097|gb|EJX88322.1| geranyltranstransferase [Enterococcus faecium ERV38]
gi|402979097|gb|EJX94784.1| geranyltranstransferase [Enterococcus faecium ERV26]
gi|402979195|gb|EJX94875.1| geranyltranstransferase [Enterococcus faecium ERV168]
gi|402981876|gb|EJX97383.1| geranyltranstransferase [Enterococcus faecium ERV165]
gi|402985310|gb|EJY00530.1| geranyltranstransferase [Enterococcus faecium ERV161]
gi|402988433|gb|EJY03440.1| geranyltranstransferase [Enterococcus faecium ERV102]
gi|402994284|gb|EJY08827.1| geranyltranstransferase [Enterococcus faecium ERV1]
gi|402998583|gb|EJY12832.1| geranyltranstransferase [Enterococcus faecium E417]
gi|402999221|gb|EJY13423.1| geranyltranstransferase [Enterococcus faecium C621]
gi|403001997|gb|EJY16010.1| geranyltranstransferase [Enterococcus faecium E422]
gi|403008464|gb|EJY21968.1| geranyltranstransferase [Enterococcus faecium C1904]
gi|403011136|gb|EJY24465.1| geranyltranstransferase [Enterococcus faecium C497]
gi|403014149|gb|EJY27167.1| geranyltranstransferase [Enterococcus faecium 514]
gi|403014721|gb|EJY27691.1| geranyltranstransferase [Enterococcus faecium 513]
gi|403016317|gb|EJY29141.1| geranyltranstransferase [Enterococcus faecium 515]
gi|403021343|gb|EJY33810.1| geranyltranstransferase [Enterococcus faecium 511]
gi|403027866|gb|EJY39722.1| geranyltranstransferase [Enterococcus faecium 510]
gi|403030009|gb|EJY41729.1| geranyltranstransferase [Enterococcus faecium 509]
gi|403034255|gb|EJY45718.1| geranyltranstransferase [Enterococcus faecium 506]
gi|403037578|gb|EJY48843.1| geranyltranstransferase [Enterococcus faecium 504]
gi|403042021|gb|EJY52997.1| geranyltranstransferase [Enterococcus faecium 503]
gi|404453831|gb|EKA00863.1| geranyltranstransferase [Enterococcus sp. GMD4E]
gi|404457701|gb|EKA04231.1| geranyltranstransferase [Enterococcus sp. GMD3E]
gi|404463165|gb|EKA08861.1| geranyltranstransferase [Enterococcus sp. GMD2E]
gi|404469398|gb|EKA14204.1| geranyltranstransferase [Enterococcus sp. GMD1E]
gi|410734599|gb|EKQ76518.1| geranyltranstransferase [Enterococcus sp. GMD5E]
gi|425723925|gb|EKU86811.1| hypothetical protein HMPREF9307_00523 [Enterococcus durans
FB129-CNAB-4]
gi|430444454|gb|ELA54292.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0164]
gi|430481404|gb|ELA58560.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0333]
gi|430486145|gb|ELA63013.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0679]
gi|430487831|gb|ELA64539.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0680]
gi|430491125|gb|ELA67607.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0688]
gi|430496223|gb|ELA72328.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1050]
gi|430534817|gb|ELA75252.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1185]
gi|430538426|gb|ELA78718.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1133]
gi|430543198|gb|ELA83273.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1552]
gi|430543872|gb|ELA83924.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1392]
gi|430548991|gb|ELA88838.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1573]
gi|430555616|gb|ELA95153.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1576]
gi|430560131|gb|ELA99437.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1578]
gi|430572666|gb|ELB11516.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1622]
gi|430572956|gb|ELB11791.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1620]
gi|430576473|gb|ELB15124.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1623]
gi|430581152|gb|ELB19599.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1627]
gi|430582621|gb|ELB21043.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1626]
gi|430584747|gb|ELB23061.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1634]
gi|430594917|gb|ELB32869.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1731]
gi|430599276|gb|ELB36987.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1904]
gi|430614768|gb|ELB51739.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2297]
gi|430620004|gb|ELB56807.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2883]
gi|430627407|gb|ELB63909.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E4215]
gi|430628635|gb|ELB65069.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1321]
gi|430634162|gb|ELB70297.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2369]
gi|430635812|gb|ELB71891.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1644]
gi|430639973|gb|ELB75827.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2560]
gi|430642153|gb|ELB77934.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E4389]
gi|430648526|gb|ELB83932.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E6045]
gi|430649700|gb|ELB85068.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E6012]
gi|445189081|gb|AGE30723.1| Octaprenyl-diphosphate synthase, Dimethylallyltransferase,
Geranyltranstransferase [Enterococcus faecium NRRL
B-2354]
Length = 296
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 134/252 (53%), Gaps = 19/252 (7%)
Query: 69 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMD 128
+Y++M YSV A G + P ++ A + + A ALEMVH SLIHDDLP MD
Sbjct: 31 LYDAMSYSVKAGGKRIRPLLLLTAVASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPAMD 90
Query: 129 DDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAV 188
+D RRG+P+NH V+G +AILAGD L FQ I + HL P++L ++ ++A
Sbjct: 91 NDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLI---SMAHLGNSPKLL-LLQQLAVCA 146
Query: 189 GSTGMAAGQFLDLEGEPNLVE-----FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRR 243
GS GM AGQ D+EGE + F+ E+K G + + + GG LA ++ + L+R
Sbjct: 147 GSQGMVAGQAADIEGESKKLSLEELAFIHERKTGHLIRYALLAGGILAKQPEEILLLLQR 206
Query: 244 YGRAVGVLYQVVDDILEAKAQTP-------RDEEKKKKKGKSYVAFYGVEKAMEVAEELR 296
+G+ +Q+ DD+L+ T +DE +K +Y G+EK E E
Sbjct: 207 LAEHLGLAFQIRDDLLDVIGTTKTLGKTAGKDERMEK---NTYPRLLGLEKTREALEIEL 263
Query: 297 AKAKEELDRFKK 308
A + +D+ ++
Sbjct: 264 LSANKIIDKLEE 275
>gi|383784947|ref|YP_005469517.1| geranyltranstransferase [Leptospirillum ferrooxidans C2-3]
gi|383083860|dbj|BAM07387.1| putative geranyltranstransferase [Leptospirillum ferrooxidans C2-3]
Length = 307
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/268 (36%), Positives = 134/268 (50%), Gaps = 13/268 (4%)
Query: 68 QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCM 127
++ ESMRYS+LA G KR P++ +AA G + P LE++H SLIHDDLP M
Sbjct: 42 RLSESMRYSLLA-GGKRIRPILSMAALSSVGHDPEPYIPLLLPLELIHTYSLIHDDLPAM 100
Query: 128 DDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARA 187
D+D RRG+P+NH V+G AILAGDAL F + L E L V+ E++
Sbjct: 101 DNDDLRRGKPTNHVVFGDATAILAGDALLTYAFTILSDPRYDELSSEKVRLAVVRELSHG 160
Query: 188 VGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLR 242
G GM GQ LD+E E + EF+ K G + S G L A E SL
Sbjct: 161 SGLAGMVGGQMLDMESEGRRISLEDLEFLHRHKTGALILSSVRIGALLGEAGASEFNSLD 220
Query: 243 RYGRAVGVLYQVVDDIL--EAKAQTPRDEEKKKKK--GKSYVAFYGVEKAMEVAEELRAK 298
+YG +VGV +Q+ DD+L E A T +K +Y A G++ A ++A+E K
Sbjct: 221 QYGESVGVAFQIADDLLDVEGDAATLGKAAQKDNNHLKNTYPALLGIDGAKKMAKE---K 277
Query: 299 AKEELDRFKKYGDNVLPLYSFIDYAADR 326
+ LD G+ L Y +R
Sbjct: 278 LEAALDAVSGLGEKADHLRGIARYIIER 305
>gi|6449050|gb|AAF08792.1|AF182827_1 geranyl diphosphate synthase small subunit [Mentha x piperita]
gi|10637873|emb|CAC10560.1| gpp synthase small subunit [Mentha x piperita]
Length = 313
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 144/278 (51%), Gaps = 17/278 (6%)
Query: 16 LPRKFPVRCSSLPVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRY 75
L R RC +AA +T + YW + +I++ L+K+IT++ PE ++ M +
Sbjct: 22 LSRSSSARCMPTAAAAAFPTIATAAQSQPYWAAIEADIERYLKKSITIRPPETVFGPMHH 81
Query: 76 SVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRG 135
A A +C+AACEL G +R A A A+ +VHAA+ +H+ LP + D
Sbjct: 82 LTFA-APATAASTLCLAACELVGGDRSQAMAAAAAIHLVHAAAYVHEHLP-LTDGSRPVS 139
Query: 136 QPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEP-RVLRVIAEIARAVGSTGMA 194
+P+ YG ++ +L GD + P GF+ + P +P R+LRVI EI+RA G GM
Sbjct: 140 KPAIQHKYGPNVELLTGDGIVPFGFELLAGSVDPARTDDPDRILRVIIEISRAGGPEGMI 199
Query: 195 AG-----QFLDLEGEPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVG 249
+G + +D + +E+V +KK+GEM C A CG L GA ++EIQ LR +G G
Sbjct: 200 SGLHREEEIVDGNTSLDFIEYVCKKKYGEMHACGAACGAILGGAAEEEIQKLRNFGLYQG 259
Query: 250 VL---------YQVVDDILEAKAQTPRDEEKKKKKGKS 278
L +Q++D+ + K + EE GK+
Sbjct: 260 TLRGMMEMKNSHQLIDENIIGKLKELALEELGGFHGKN 297
>gi|187921415|ref|YP_001890447.1| polyprenyl synthetase [Burkholderia phytofirmans PsJN]
gi|187719853|gb|ACD21076.1| Polyprenyl synthetase [Burkholderia phytofirmans PsJN]
Length = 293
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/265 (38%), Positives = 138/265 (52%), Gaps = 15/265 (5%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P ++E+MRY+VL G KR P++C AA EL G A ALEM+H SL+HDD+P
Sbjct: 29 PATLHEAMRYAVLGGG-KRVRPLLCHAAGELTGARAECLDAAAAALEMIHVYSLVHDDMP 87
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GDAL F VS T L P + ++ E+A
Sbjct: 88 CMDDDALRRGKPTVHVKYDEATALLVGDALQSQAF---VSLTSDVLAPAQQA-ALVRELA 143
Query: 186 RAVGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEMSEC----SAVCGGFLAGA--DDDEIQ 239
A GS GM GQ +DL + + Q + M +AV G LAG D D ++
Sbjct: 144 LASGSIGMCGGQAIDLASVGHTLTRTQLETMHRMKTGALLRAAVRMGALAGETPDADAMR 203
Query: 240 SLRRYGRAVGVLYQVVDDILEA---KAQTPRDEEKKKKKGK-SYVAFYGVEKAMEVAEEL 295
SL Y AVG+ +QVVDDIL+ A + K K GK +YV+ G++ + +A +L
Sbjct: 204 SLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGKDAKDGKPTYVSIIGLDASRALAAQL 263
Query: 296 RAKAKEELDRFKKYGDNVLPLYSFI 320
R+ A L F + L +
Sbjct: 264 RSDAHAALAPFGARAQRLAELADLV 288
>gi|229163124|ref|ZP_04291080.1| Geranyltranstransferase [Bacillus cereus R309803]
gi|228620530|gb|EEK77400.1| Geranyltranstransferase [Bacillus cereus R309803]
Length = 296
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/254 (35%), Positives = 146/254 (57%), Gaps = 17/254 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + E+M YS L G KR P++ A + FG R ACALEM+H SL+HDDLP
Sbjct: 30 PNVLREAMAYS-LEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLP 88
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH V+G +A+LAGD L FQ I+++ + E +V R++ E+A
Sbjct: 89 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKV-RLVLELA 147
Query: 186 RAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM GQ D+E E L +E++ + K G++ E + + G L+ A +++ ++
Sbjct: 148 KAAGPEGMVGGQVADMEAEGELLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEKN 207
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVAE 293
L + + +G+ +Q+ DDIL+ + +EE K G +Y + V++A ++ E
Sbjct: 208 LLTFAKYIGLAFQIRDDILDVEGT---EEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILE 264
Query: 294 ELRAKAKEELDRFK 307
+ AKAK+ + +
Sbjct: 265 DTIAKAKDAISSLQ 278
>gi|379727704|ref|YP_005319889.1| octaprenyl-diphosphate synthase/ dimethylallyltransferase/
geranyltranstransferase [Melissococcus plutonius DAT561]
gi|376318607|dbj|BAL62394.1| octaprenyl-diphosphate synthase/ dimethylallyltransferase/
geranyltranstransferase [Melissococcus plutonius DAT561]
Length = 296
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/274 (35%), Positives = 143/274 (52%), Gaps = 22/274 (8%)
Query: 41 DLKTYWTTLITEIDQNLEKAITVKYPEQ-IYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
D + I I++ + I +Q + ++M YS+ A G KR P++ +A F
Sbjct: 3 DFTIFKQKHIDRIEKEMANFIESHTSDQSLKKAMLYSIQA-GGKRLRPLLLLATINSFNC 61
Query: 100 -NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
A+ TA ALEM+H SLIHDDLP MD+D RRG+P+NH ++G +AILAGD L
Sbjct: 62 PIEQGAYQTAAALEMLHTYSLIHDDLPAMDNDDLRRGKPTNHKIFGEALAILAGDGLLTG 121
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP---NLVEF--VQE 213
FQ + T + + + + + + G+ GM AGQ DL+GE NL E V
Sbjct: 122 AFQLLALST----IEADKKILLTQLLGQTAGTEGMVAGQSGDLQGEKKALNLQELSEVHR 177
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
KK G + E S + GG LA ++ I L++ A G+ +Q+ DD+L+ +E++ K
Sbjct: 178 KKTGALIEFSFMAGGILANQSEEIICLLKQLANAFGLAFQIRDDLLDV---IGSEEKQGK 234
Query: 274 KKGK-------SYVAFYGVEKAMEVAEELRAKAK 300
K G+ +Y A G+EKA E + A AK
Sbjct: 235 KIGRDQCLNKSTYPALLGIEKAKEALTQQVANAK 268
>gi|75674693|ref|YP_317114.1| polyprenyl synthetase [Nitrobacter winogradskyi Nb-255]
gi|74419563|gb|ABA03762.1| farnesyl-diphosphate synthase [Nitrobacter winogradskyi Nb-255]
Length = 308
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 150/307 (48%), Gaps = 25/307 (8%)
Query: 33 SQLRSTQFDLKTYWTTLITEIDQNLEKAIT-------VKYPEQIYESMRYSVLAKGTKRA 85
S L S F ++ T E + LEK ++ + P ++ ++MRYS L G KR
Sbjct: 3 SGLSSADFAIR--LDTTADETEAVLEKLLSDAPLPDEIARPRRLTDAMRYSSLGGG-KRL 59
Query: 86 PPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGV 145
P + V + +FGV R AA ALE +H SLIHDDLP MD+ RRG+P+ H
Sbjct: 60 RPFLVVESSAVFGVPREAALLAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKTTDD 119
Query: 146 DIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE- 204
AILAGD L L F I++ H P R+L A +ARA G GM GQ LDL GE
Sbjct: 120 ATAILAGDGLLTLAFD-IITRDEVHDDPAVRLLLTRA-LARAAGIGGMVGGQLLDLAGEG 177
Query: 205 ------PNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDI 258
P V VQ+ K G + + G L A + Q+L YGRA+G +Q+ DD+
Sbjct: 178 RFGDRGPVDVARVQQMKTGALLRFGCIAGALLGQASQKDYQALDAYGRALGEAFQIADDL 237
Query: 259 LEAKAQT-----PRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNV 313
L+ ++ P + K ++V G++ A + +L AKA E L F GD +
Sbjct: 238 LDVESDAAALGKPTGADAALGK-TTFVTQLGIDGAKKRVRDLLAKADEALSVFGSRGDVL 296
Query: 314 LPLYSFI 320
F+
Sbjct: 297 RAAAHFV 303
>gi|303232200|ref|ZP_07318903.1| putative geranyltranstransferase [Veillonella atypica
ACS-049-V-Sch6]
gi|401680086|ref|ZP_10812010.1| polyprenyl synthetase [Veillonella sp. ACP1]
gi|429759440|ref|ZP_19291939.1| putative geranyltranstransferase [Veillonella atypica KON]
gi|302513306|gb|EFL55345.1| putative geranyltranstransferase [Veillonella atypica
ACS-049-V-Sch6]
gi|400219213|gb|EJO50084.1| polyprenyl synthetase [Veillonella sp. ACP1]
gi|429179716|gb|EKY20955.1| putative geranyltranstransferase [Veillonella atypica KON]
Length = 292
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 144/298 (48%), Gaps = 22/298 (7%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPE--QIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
LKTY T I+ L + PE ++YESM YS+L +G KR P++ A + V
Sbjct: 2 LKTYLETSKQSIEHWLSAVLNSPIPEYKRLYESMNYSLL-QGGKRIRPILTKAVLDAMKV 60
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+ CALE +H SLIHDDLP MD+D RRG +NH VYG +AILAGD L
Sbjct: 61 DASLYKEFLCALECIHTYSLIHDDLPAMDNDDYRRGNLTNHKVYGDGMAILAGDGLLTYA 120
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEK 214
FQ +T + ++ I +A A G GM GQ DL E + + +
Sbjct: 121 FQLCSENTTA---SAEQKIKAIQCLATAAGPEGMVGGQAFDLLSEGKHIPLEELKVLHSG 177
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL------EAKAQTPRD 268
K G + + G L+ AD + + Y +G+L+Q+ DDIL E +TP
Sbjct: 178 KTGALFNAAIELGLILSNADQAKYAAYMTYANCLGLLFQITDDILDVTGTIEELGKTPGS 237
Query: 269 EEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
+ ++ K +YV+ G+++A A + KA L + D+ L + IDY DR
Sbjct: 238 DIRQDK--STYVSLLGLDEARNEAHVVAQKAHAALATIE---DDTHILSAIIDYLLDR 290
>gi|303228797|ref|ZP_07315611.1| putative geranyltranstransferase [Veillonella atypica
ACS-134-V-Col7a]
gi|302516509|gb|EFL58437.1| putative geranyltranstransferase [Veillonella atypica
ACS-134-V-Col7a]
Length = 292
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 144/298 (48%), Gaps = 22/298 (7%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPE--QIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
LKTY T I+ L + PE ++YESM YS+L +G KR P++ A + V
Sbjct: 2 LKTYLETSKQSIEHWLSAVLNSPIPEYKRLYESMNYSLL-QGGKRIRPILTKAVLDAMKV 60
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
+ CALE +H SLIHDDLP MD+D RRG +NH VYG +AILAGD L
Sbjct: 61 DASLYKEFLCALECIHTYSLIHDDLPAMDNDDYRRGNLTNHKVYGDGMAILAGDGLLTYA 120
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEK 214
FQ +T + ++ I +A A G GM GQ DL E + + +
Sbjct: 121 FQLCSENTTA---SAEQKIKAIQCLATAAGPEGMVGGQAFDLLSEGKHIPLEELKVLHSG 177
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL------EAKAQTPRD 268
K G + + G L+ AD + + Y +G+L+Q+ DDIL E +TP
Sbjct: 178 KTGALFNAAIELGLILSNADQAKYAAYMTYANCLGLLFQITDDILDVTGTIEELGKTPGS 237
Query: 269 EEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
+ ++ K +YV+ G+++A A + KA L + D+ L + IDY DR
Sbjct: 238 DIRQDK--STYVSLLGLDEARNEAHVVAQKAHAALATIE---DDTHILSAIIDYLLDR 290
>gi|307726551|ref|YP_003909764.1| polyprenyl synthetase [Burkholderia sp. CCGE1003]
gi|307587076|gb|ADN60473.1| Polyprenyl synthetase [Burkholderia sp. CCGE1003]
Length = 293
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/288 (36%), Positives = 149/288 (51%), Gaps = 18/288 (6%)
Query: 46 WTTLITE-IDQNLEKAITVKY--PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRI 102
WT + E ++ LE + + P +++E+MRY+VL G KR P++C AA EL G
Sbjct: 6 WTRGVLERVEAALEHYLPAESTEPAKLHEAMRYAVLGGG-KRVRPLLCHAAGELTGARAE 64
Query: 103 AAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQH 162
A ALEM+H SL+HDD+PCMDDD RRG+P+ H Y A+L GDAL F
Sbjct: 65 CLDAAAAALEMIHVYSLVHDDMPCMDDDALRRGKPTVHVKYDEATALLVGDALQSQAF-- 122
Query: 163 IVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEMSEC 222
VS T L P + ++ E+A A GS GM GQ +DL + + Q + M
Sbjct: 123 -VSLTSDVLAPAQQA-ALVRELALASGSVGMCGGQAIDLASVGHTLTRAQLETMHRMKTG 180
Query: 223 ----SAVCGGFLAGA--DDDEIQSLRRYGRAVGVLYQVVDDILEA---KAQTPRDEEKKK 273
+AV G LAG D + ++SL Y AVG+ +QVVDDIL+ A + K
Sbjct: 181 ALLRAAVRMGALAGEAPDANAMRSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGKDA 240
Query: 274 KKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
K GK +YV+ G++ + +A +LR+ A L F + L +
Sbjct: 241 KDGKPTYVSIIGLDASRALAAQLRSDAHAALAPFGARAQRLAELADLV 288
>gi|196230692|ref|ZP_03129553.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428]
gi|196225033|gb|EDY19542.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428]
Length = 293
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/306 (36%), Positives = 164/306 (53%), Gaps = 30/306 (9%)
Query: 40 FDLKTYWTTLITEIDQNLEKAI---TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
+LK+Y T IDQ L++ + +VK P I+++MRYS+ A G KR P + +AA E
Sbjct: 1 MELKSYLTARGKLIDQALDRFLPRASVK-PRTIHKAMRYSLFAGG-KRLRPALTLAAAEA 58
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
A P ACA+E +H SLIHDDLPCMDDD RRG+P++H V+G +A+LAGDAL
Sbjct: 59 CDGEVARALPAACAVECIHTYSLIHDDLPCMDDDDLRRGRPTSHKVFGEGVAVLAGDALL 118
Query: 157 PLGFQHIVS--HTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----E 209
+ F+ + T + +P +I E+A A GS + GQ DLEGE + +
Sbjct: 119 TIAFEILAQAKETSRYKMPA-----LIGELAGASGSQWLIGGQVADLEGEGKKISGAELK 173
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
++ K + S GG A A +++L +G+++G+ +QV+DDIL+ T E
Sbjct: 174 YIHRCKTAALLTASIRLGGMSANASPARLKNLTEFGQSLGLAFQVIDDILDV---TQTTE 230
Query: 270 EKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
+ K GK +Y A +G+E++ E A L A L F K G L +F DY
Sbjct: 231 KLGKTAGKDVAATKATYPAIFGLERSREEAHRLTLAAHAALKPFGKSGAT---LRAFADY 287
Query: 323 AADREF 328
R++
Sbjct: 288 LLVRDY 293
>gi|317484629|ref|ZP_07943532.1| polyprenyl synthetase [Bilophila wadsworthia 3_1_6]
gi|316924103|gb|EFV45286.1| polyprenyl synthetase [Bilophila wadsworthia 3_1_6]
Length = 302
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 147/250 (58%), Gaps = 15/250 (6%)
Query: 68 QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCM 127
++ E+M YS+LA G KR PV+C++ LFG++ A P A +LEM+H SLIHDDLP M
Sbjct: 37 RLKEAMYYSLLAGG-KRLRPVLCLSTAALFGLSAEAVMPFAASLEMIHTYSLIHDDLPAM 95
Query: 128 DDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARA 187
DDD RRG+PS H + AILAGDAL F + S +P RVL +A ++ A
Sbjct: 96 DDDDLRRGRPSCHKAFDEATAILAGDALLTDAFGFMASTVKD--LPAGRVLEALASVSSA 153
Query: 188 VGSTGMAAGQFLDLE--GEPNL----VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSL 241
GS GM GQ LD++ G+ N+ ++ + K G M + V GG LAGA + +I SL
Sbjct: 154 AGSAGMVGGQILDMDCTGKTNVPLETLQTLHALKTGAMFRVACVSGGLLAGASESDIASL 213
Query: 242 RRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYVAFYGVEKAMEVAEELR 296
R YG A+GV +Q+VDDIL+ A T P + + K +Y + G++++ E+A+E
Sbjct: 214 RAYGEALGVTFQIVDDILDETADTATLGKPAGSDAEMGK-TTYPSLMGLDRSRELAQEFA 272
Query: 297 AKAKEELDRF 306
KA + L F
Sbjct: 273 EKAVDSLSAF 282
>gi|372267523|ref|ZP_09503571.1| geranyltranstransferase [Alteromonas sp. S89]
Length = 300
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 158/303 (52%), Gaps = 23/303 (7%)
Query: 42 LKTYWTTLITEIDQNLEKAITVK-YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG-V 99
LK + + ++++ L A++ + E ++ +M+Y+ L G + P ++ +A L G
Sbjct: 5 LKAFLQSSSLQVERTLTAALSDESQAETLFAAMQYAALGPGKRLRPALVYASALALGGEA 64
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A ALE VHA SL+HDDLP MDDD RRG+P+ H + AILAGDAL
Sbjct: 65 CAENCHAAAAALECVHAYSLVHDDLPAMDDDALRRGRPTCHIQFDEATAILAGDALQCQA 124
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEK----- 214
F+ +++ P L + +V R+IAE+ARA G+ GM AGQ +DL + Q K
Sbjct: 125 FE-LLAGAP--LAADLKV-RLIAELARASGARGMVAGQAIDLAAVDQSLTLEQLKHMHRL 180
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKK 274
K G + SA G + GA++ ++ ++ RY A+G+ +QV DDIL+ A T E K
Sbjct: 181 KTGALISASARIGALIGGANEVQLAAITRYAEAIGLAFQVQDDILDVTANT---ETLGKT 237
Query: 275 KGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGD--NVLPLYSFIDYAAD 325
+G +YV+ G++ A A+EL +A + L D N L DY +
Sbjct: 238 QGADAARNKPTYVSLLGLDGAQAKAKELHREAHQALQEISTPADKRNFRVLQQLADYIVN 297
Query: 326 REF 328
R++
Sbjct: 298 RDY 300
>gi|320354500|ref|YP_004195839.1| farnesyl-diphosphate synthase [Desulfobulbus propionicus DSM 2032]
gi|320123002|gb|ADW18548.1| farnesyl-diphosphate synthase [Desulfobulbus propionicus DSM 2032]
Length = 298
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 144/273 (52%), Gaps = 19/273 (6%)
Query: 68 QIYESMRYSVLAKGTKRAPPVMCVAACELFG---VNRIAAFPTACALEMVHAASLIHDDL 124
Q ESMRYS+ G KR P++C+A E R A ACALE +H SLIHDDL
Sbjct: 31 QHIESMRYSLFVGG-KRIRPILCLAGAEAVDSGEATRQRALSVACALECIHTYSLIHDDL 89
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MDDD RRG+P+NHTV+G AILAGD L F + S + R+ R+I I
Sbjct: 90 PAMDDDDLRRGKPTNHTVFGEAAAILAGDGLLTFAFDLLSSQASADINDAARI-RIIQTI 148
Query: 185 ARAVGSTGMAAGQFLDL--EGEP---NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
ARA G GM GQ LD+ EG+ ++ + K G + S + G +AGA ++
Sbjct: 149 ARAAGPLGMVGGQSLDMIYEGQQVGYEMLRTIHRSKTGALITASVLSGAMVAGASAEQET 208
Query: 240 SLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYVAFYGVEKAMEVAEE 294
+L+ YG +G+ +Q+VDD+L+ +A T P + K K +Y + +G E + +A E
Sbjct: 209 ALKTYGDNIGLAFQIVDDLLDVEATTEQLGKPAGSDLKSDK-VTYPSLFGKETSRTMARE 267
Query: 295 LRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+A L F D PL + ++ DR+
Sbjct: 268 AVQEAIAALAAFDHQAD---PLRNLANFIVDRK 297
>gi|449444204|ref|XP_004139865.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Cucumis sativus]
gi|449502924|ref|XP_004161781.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Cucumis sativus]
Length = 300
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 148/281 (52%), Gaps = 32/281 (11%)
Query: 44 TYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIA 103
+YW + +I+ +L + I VK P +YE + + + + + + P +C+AACEL G +R
Sbjct: 47 SYWAAINEDIEDHLRRVIPVKDPVAVYEPLGHFIFS-APRNSAPALCIAACELVGGHRDQ 105
Query: 104 AFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSN--HTVYGVDIAILAGDALFPLGFQ 161
A A A+++++AA+ H+ P + RG+ ++ VYG ++ ++ GD + P+GF+
Sbjct: 106 AMAAATAIQLIYAATCTHEYPPL-----TARGKRASVVDRVYGSNVQLMTGDGITPMGFE 160
Query: 162 HIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEMSE 221
+ RV RV+ E+ARA+G+ G GQF LE E VE V EK G +
Sbjct: 161 ILAESCDWSERGSERVRRVMVEVARAMGTEGWIGGQFRGLE-EEATVEEVIEKTEGGLHA 219
Query: 222 CSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVA 281
C CG + G +++EI+ +R+YG+ VG++ + + K + E+K++K
Sbjct: 220 CGGACGAIMGGGNEEEIEKMRKYGKLVGIVKGLTQIVFGGK-----ENERKREK------ 268
Query: 282 FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
EEL+ A +EL+ F G+ V +Y F+D+
Sbjct: 269 ----------IEELKVLAFKELEGFN--GEMVPQIYGFLDF 297
>gi|354806986|ref|ZP_09040463.1| farnesyl-diphosphate synthase [Lactobacillus curvatus CRL 705]
gi|354514491|gb|EHE86461.1| farnesyl-diphosphate synthase [Lactobacillus curvatus CRL 705]
Length = 290
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 154/296 (52%), Gaps = 38/296 (12%)
Query: 42 LKTYWTTLITEIDQ-NLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG-- 98
+TY T + +I++ L+KA+T YSV+A G KR P++ A G
Sbjct: 15 FETYLTEQLAQIEEPTLQKAMT------------YSVMAGG-KRLRPLLVFAVLASAGRP 61
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
+N++A + A ALE++H+ SLIHDDLP MD+D RRGQP+NH V+G AILAGD L L
Sbjct: 62 INQMA-YRVAGALELIHSYSLIHDDLPAMDNDDLRRGQPTNHKVFGEAQAILAGDGLLTL 120
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEK---- 214
F+ + + + + +R + +A+A G +GM AGQ D+EG+ + VQ K
Sbjct: 121 AFEWLTTTD----LTTDQQIRAVRLLAQAAGPSGMVAGQIEDIEGQTKTLSLVQLKQVHQ 176
Query: 215 -KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP------- 266
K G + EC+ G LA D+++ SL+ + + G+ +Q+ DDIL+ + T
Sbjct: 177 LKTGRLIECAVGLGAILADLSDEQMASLQLFAQNYGLAFQIQDDILDVTSTTEAMGKAVH 236
Query: 267 RDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
+D ++ K + G + A++ + A +L K L SF++Y
Sbjct: 237 KDADEHKNTFPGLLGLAGAKDALDETYQAAQTALTDLSGLDKA-----LLNSFLNY 287
>gi|340785925|ref|YP_004751390.1| geranyltranstransferase [Collimonas fungivorans Ter331]
gi|340551192|gb|AEK60567.1| Geranyltranstransferase [Collimonas fungivorans Ter331]
Length = 299
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/299 (34%), Positives = 156/299 (52%), Gaps = 25/299 (8%)
Query: 40 FD--LKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
FD ++ T + +D+ L A ++ P +++++MRY+VL G KR P++ AA ELF
Sbjct: 3 FDAWMRQTQTGMEAALDRFLPAATSI--PARLHQAMRYAVL-DGGKRVRPLLVFAAGELF 59
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
A A A+EM+HA SL+HDD+PCMDDD RRG+P+ H Y A+L GDAL
Sbjct: 60 ATPLTVAQRAAAAVEMIHAYSLVHDDMPCMDDDALRRGKPTVHVQYDEATALLVGDALQS 119
Query: 158 LGFQHIVSHTPPHLVPE---PRVLRVIAEIARAVGSTGMAAGQFLDLEG---EPNLVEFV 211
F +++ + E R + ++ +A+A GS GM GQ +DL +L E
Sbjct: 120 QAFV-VLAEAGAEIGAEIDSARQIVMLRLLAQASGSLGMCGGQAIDLASVGLNLSLAELE 178
Query: 212 QEKKF--GEMSECSAVCGGF----LAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT 265
Q K G + S + G + LA A EI++L YG A+G+ +QVVDDIL+A A +
Sbjct: 179 QMHKLKTGALLRASVLLGAWGGKALAPA---EIEALEAYGTAIGLAFQVVDDILDATADS 235
Query: 266 PRDEEKKKKKGK----SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+ K +YV+ G+ ++ +AE+LR A + L F + L I
Sbjct: 236 ATLGKTAGKDAADNKPTYVSILGLPESQALAEKLRNDAHQALAIFGNKARRLRELADLI 294
>gi|350536851|ref|NP_001234268.1| geranylgeranyl pyrophosphate synthetase-like protein [Solanum
lycopersicum]
gi|76363949|gb|ABA41594.1| geranylgeranyl pyrophosphate synthetase-like protein [Solanum
lycopersicum]
Length = 206
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/173 (48%), Positives = 110/173 (63%), Gaps = 9/173 (5%)
Query: 16 LPRKFPVRCSSLPVSA------ASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQI 69
L KF SSL VSA S+ + + K Y +++ LE A+++K P I
Sbjct: 37 LKMKFFTNPSSLSVSALLTKEQESKSKKQAMEFKEYVLEKAVSVNKALESAVSIKEPVMI 96
Query: 70 YESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDD 129
+ESMRYS+LA G KR P++C+AACEL G A P ACA+EM+H SLIHDDLPCMD+
Sbjct: 97 HESMRYSLLAGG-KRIRPMLCIAACELVGGVESTAMPAACAVEMIHTMSLIHDDLPCMDN 155
Query: 130 DPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIA 182
D RRG+P+NH +YG D+A+LAGDAL L F+HI +HT V R++RVI
Sbjct: 156 DDLRRGKPTNHKIYGEDVAVLAGDALLALAFEHIATHTKG--VSSDRIVRVIG 206
>gi|389792829|ref|ZP_10196011.1| farnesyl-diphosphate synthase [Rhodanobacter fulvus Jip2]
gi|388435693|gb|EIL92590.1| farnesyl-diphosphate synthase [Rhodanobacter fulvus Jip2]
Length = 293
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 147/290 (50%), Gaps = 16/290 (5%)
Query: 48 TLITEIDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAF 105
LI +Q L+ + + P ++ +MRY+VL G KR P++ A + G +
Sbjct: 7 ALILRAEQALDHRLPPADQSPADLHRAMRYAVLGGG-KRLRPLLVYATAQALGEDGPQLD 65
Query: 106 PTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVS 165
ACA+E++HA SL+HDDLP MDDD RRG+P+ H V+G +AILAGDAL L F+ +
Sbjct: 66 AAACAVELIHAYSLVHDDLPAMDDDALRRGRPTCHVVFGEAMAILAGDALQALAFEILAE 125
Query: 166 HTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLE--GEP---NLVEFVQEKKFGEMS 220
T P + ++ + RA G+ GMA GQ LDL G+P +E + K G +
Sbjct: 126 DTTRQTDPATG-MAMLRTLGRACGAEGMAGGQALDLAAVGQPLTLAQLEHMHACKTGALI 184
Query: 221 ECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT---PRDEEKKKKKGK 277
S G AG D D +Q+L Y AVG+ +QV DDIL+ + ++ + K GK
Sbjct: 185 RASVRLGALAAGGDADVLQALDDYANAVGLAFQVRDDILDVEGESIVIGKTAGKDAAAGK 244
Query: 278 -SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
++ + G++ + EL A L G+ L YAA R
Sbjct: 245 PTFPSIIGLDASRARLAELTNAA---LAAISPLGERGALLRELAHYAAQR 291
>gi|451936473|ref|YP_007460327.1| farnesyl diphosphate synthase [Candidatus Kinetoplastibacterium
oncopeltii TCC290E]
gi|451777396|gb|AGF48371.1| farnesyl diphosphate synthase [Candidatus Kinetoplastibacterium
oncopeltii TCC290E]
Length = 304
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 153/287 (53%), Gaps = 31/287 (10%)
Query: 35 LRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQ---IYESMRYSVLAKGTKRAPPVMCV 91
+ + + ++ I+ NL K I Y + ++MRYS ++ G KR ++
Sbjct: 1 MNENNLSFSDWISNIMNNINDNLNK-ILPDYDSSSSILQKAMRYSTVSGG-KRIRALLVY 58
Query: 92 A---ACELFGVNR----IAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYG 144
A A + V + IA A A+E++H+ SLIHDDLP MD+D +RRG+PS+H V+G
Sbjct: 59 ASFIASNDYLVEKDDILIALDKAAIAMELIHSYSLIHDDLPSMDNDCTRRGKPSSHIVFG 118
Query: 145 VDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE 204
IAILAGDAL L F+ + + H E R L +I +A++ G GM+ GQ +DL+
Sbjct: 119 EGIAILAGDALQSLAFELLSRISISH---ETR-LNLIKNLAQSAGYLGMSGGQAIDLDNI 174
Query: 205 PNLVEFVQEK-----KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL 259
N + + Q K K G + CS G LAGA+ L + +G+++Q+VDDI+
Sbjct: 175 GNNISYDQLKNMHSMKTGAIIACSIKFGYLLAGANQIVRCMLDDFANYLGIIFQIVDDII 234
Query: 260 EAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKA 299
+ T E+ K GK +YV+ +G+ ++ ++ +EL+ KA
Sbjct: 235 DV---TSSGEQLGKTAGKDHKYNKPTYVSIFGIVESRKILDELKNKA 278
>gi|288553327|ref|YP_003425262.1| geranyltranstransferase [Bacillus pseudofirmus OF4]
gi|288544487|gb|ADC48370.1| geranyltranstransferase [Bacillus pseudofirmus OF4]
Length = 296
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 164/300 (54%), Gaps = 23/300 (7%)
Query: 42 LKTYWTTLITEIDQNLEKAI-TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVN 100
LK ++ ID L I ++ P+ + ++M YS+ A G KR P++ +A + F
Sbjct: 5 LKGFFNEYRKLIDARLPSYIEDLRAPDTLKQAMTYSLKAGG-KRVRPLLLLATLDGFNRP 63
Query: 101 RIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGF 160
F ACA+EM+H SLIHDDLP MDDD +RRGQP+NH VYG +AILAGDAL F
Sbjct: 64 IEDGFDLACAIEMIHTYSLIHDDLPAMDDDDTRRGQPTNHKVYGEAMAILAGDALLTYSF 123
Query: 161 QHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQE------K 214
+ I S + P + L ++ E+A+A G GM GQ D+EGE N VQE
Sbjct: 124 ELITSMSAVREEP-AKALTLVRELAKASGPCGMVGGQVADIEGE-NRSLTVQELADIHHH 181
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPR------- 267
K G++ S + G LA A +++++ LR + +G+L+Q+ DDIL+ + + +
Sbjct: 182 KTGDLLAYSIIAGAVLADASEEDLEHLRMFAIELGLLFQIKDDILDVEGDSDKLGKPVGS 241
Query: 268 DEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
D+ K +Y + G+++A ++ + KAKE L+ K D L L + DY A R+
Sbjct: 242 DDGNNK---STYPSLLGLDEAKKMLDVHTMKAKEHLEAVKM--DRTL-LLALTDYVAGRD 295
>gi|212703021|ref|ZP_03311149.1| hypothetical protein DESPIG_01059 [Desulfovibrio piger ATCC 29098]
gi|212673609|gb|EEB34092.1| polyprenyl synthetase [Desulfovibrio piger ATCC 29098]
Length = 298
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/242 (41%), Positives = 138/242 (57%), Gaps = 17/242 (7%)
Query: 64 KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDD 123
+ P ++ ESM YS+ A G KR PV+C++ L G+ P A A+EMVH SLIHDD
Sbjct: 31 EMPPRLRESMLYSLQAGG-KRLRPVLCLSCAALCGLKAEDVLPFASAIEMVHTYSLIHDD 89
Query: 124 LPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAE 183
LP MDDD RRG+PSNH + AILAGDAL F H+ +P +VLR +AE
Sbjct: 90 LPAMDDDDLRRGKPSNHKAFDEATAILAGDALLTDAFAHMCRVE----LPAGQVLRAMAE 145
Query: 184 IARAVGSTGMAAGQFLDL--EGEP--NLVEF--VQEKKFGEMSECSAVCGGFLAGADDDE 237
ARA GS+GM GQ D+ G P ++ E + K G + S VCG LAGA DD
Sbjct: 146 FARAAGSSGMVGGQEWDMLYTGLPPVSMAELRRMHAMKTGALLRASCVCGALLAGAADDV 205
Query: 238 IQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYVAFYGVEKAMEVA 292
+ + RYG A+GV +Q+ DDIL+ + T P + ++ K +Y A G++++ +A
Sbjct: 206 CERIGRYGAALGVAFQIADDILDVVSDTATLGKPAGSDAEQGK-NTYPALVGLDESRRLA 264
Query: 293 EE 294
E
Sbjct: 265 RE 266
>gi|395788884|ref|ZP_10468423.1| hypothetical protein ME9_00140 [Bartonella taylorii 8TBB]
gi|395431749|gb|EJF97761.1| hypothetical protein ME9_00140 [Bartonella taylorii 8TBB]
Length = 300
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 153/306 (50%), Gaps = 34/306 (11%)
Query: 46 WTTLITEIDQNLEKAI-----------TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAAC 94
+TTL+ E +EK + + PE + ++MRY VL G KR P + + +
Sbjct: 4 FTTLLAEHAHTVEKRLDTLLSDQVQTGEIARPETLIKAMRYGVL-NGGKRLRPFLVMQSA 62
Query: 95 ELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDA 154
LF + + ACALE VH SLIHDDLP MD+D RRG+P+ H + AILAG+A
Sbjct: 63 ALFDIPAEHSLDIACALECVHCYSLIHDDLPAMDNDTLRRGKPTVHRAFDEATAILAGNA 122
Query: 155 LFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE------PNLV 208
L F+ I++H L + R+ +++ +A++ G GM GQ LDLE E N++
Sbjct: 123 LLTFAFE-IIAHKASTLPFDTRI-KLVTALAQSAGIGGMVGGQMLDLEAEKKPQESTNII 180
Query: 209 EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRD 268
+Q K + + G + A + + L +G +G+ +Q+ DD+L+ T +
Sbjct: 181 T-LQRMKTAALISFACQAGAIIGNASKEFTEKLAAFGTYLGLAFQLTDDLLDV---TAKS 236
Query: 269 EEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFID 321
E K GK ++V YG+E+ + +EL AKA+ L F G PL
Sbjct: 237 EILGKTVGKDKTAHKATFVRLYGIEETQKKRDELIAKAEVLLHPF---GAKAKPLQQAAR 293
Query: 322 YAADRE 327
++A R+
Sbjct: 294 FSATRK 299
>gi|332638330|ref|ZP_08417193.1| farnesyl-diphosphate synthase [Weissella cibaria KACC 11862]
Length = 287
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 152/289 (52%), Gaps = 19/289 (6%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPEQ-IYESMRYSVLAKGTKRAPPVMCVAACELFGVN 100
L + T++ +I+ L + Q + ++M Y+V+A G KR P++ +A + +G+
Sbjct: 3 LSEFSATVVPQIEDKLAAELAHSTSNQTMRDAMTYAVMAGG-KRLRPLLTLAVAQSYGLG 61
Query: 101 RIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGF 160
A ALE++H SLIHDDLP MD+D RRG+P+ H +G D+AILAGDAL PL +
Sbjct: 62 INGLLRAASALELIHTYSLIHDDLPAMDNDDMRRGKPTTHKAFGEDVAILAGDALQPLAY 121
Query: 161 QHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP------NLVEFVQEK 214
Q + S L+ P+ + ++A A G+ GM AGQ +D+ + V+ + +
Sbjct: 122 QWLASDP---LLTTPQKAELTLQLALASGADGMVAGQVMDMAATNAATISLDQVKAIHYR 178
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKK 274
K G + +A+ GG +A A D+ ++L +G A G+ +Q+ DD+ + D++
Sbjct: 179 KTGALIAYAAIAGGIMAHASDEVKETLWNFGMAYGLAFQIKDDLDDLGQDDVADKQ---- 234
Query: 275 KGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKY-GDNVLPLYSFIDY 322
+Y GV+ A + E A + +F + G+ L SF+DY
Sbjct: 235 ---AYPTILGVDGAKDALREQVRIATNAIVKFGELTGNETTLLLSFLDY 280
>gi|254502825|ref|ZP_05114976.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11]
gi|222438896|gb|EEE45575.1| polyprenyl synthetase superfamily [Labrenzia alexandrii DFL-11]
Length = 301
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/307 (34%), Positives = 153/307 (49%), Gaps = 30/307 (9%)
Query: 40 FDLKTYWT-------TLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVA 92
FDLK++ T +T + + E+ + PE++ +MR+ L G KR PV+ +
Sbjct: 3 FDLKSHLAAQAGRIETALTSLLKETERDGEISRPERLINAMRHGAL-NGGKRLRPVLVMD 61
Query: 93 ACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAG 152
A LFG CALE++H SL+HDDLP MDDD RRGQP+ H Y AILAG
Sbjct: 62 AAGLFGRADDGVVQAGCALELIHCYSLVHDDLPAMDDDDLRRGQPTVHKAYDDATAILAG 121
Query: 153 DALFPLGFQHIVSHTPPHLVPEPRV-LRVIAEIARAVGSTGMAAGQFLDLEGEPN----- 206
DAL L F +++ H PE + LR+ E+ARA G GMA GQ LDLE E
Sbjct: 122 DALLTLAFD-VITDEAVH--PEAGIRLRLCRELARASGIGGMAGGQMLDLESEHRDRSEA 178
Query: 207 LVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQ-- 264
+ +Q K G + + G L A D +++ L R+G +G+ +Q+ DD+L+ +A
Sbjct: 179 EIRHLQSMKTGALLRYACRAGAILGDASDADVERLTRFGEIIGLAFQLADDLLDVEASPE 238
Query: 265 -----TPRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSF 319
T +D E K + V G+++ EL+A +E D YG L +
Sbjct: 239 AMGKATGKDAEAGK---ATLVGLMGIDR---TRAELQALLEEAHDLMAPYGSKAAALNAL 292
Query: 320 IDYAADR 326
DY R
Sbjct: 293 ADYVVTR 299
>gi|289526778|pdb|3KRA|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium
gi|289526779|pdb|3KRA|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium
gi|289526782|pdb|3KRC|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ipp
gi|289526783|pdb|3KRC|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ipp
gi|289526786|pdb|3KRF|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (I)
gi|289526787|pdb|3KRF|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (I)
gi|289526790|pdb|3KRO|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (Ii)
gi|289526791|pdb|3KRO|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (Ii)
gi|289526794|pdb|3KRP|B Chain B, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium And Gpp
gi|289526795|pdb|3KRP|C Chain C, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium And Gpp
Length = 274
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 136/252 (53%), Gaps = 17/252 (6%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNR 101
++ YW + +I++ L+K+IT++ PE ++ M + A A +C+AACEL G +R
Sbjct: 1 MQPYWAAIEADIERYLKKSITIRPPETVFGPMHHLTFA-APATAASTLCLAACELVGGDR 59
Query: 102 IAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQ 161
A A A+ +VHAA+ +H+ LP + D +P+ YG ++ +L GD + P GF+
Sbjct: 60 SQAMAAAAAIHLVHAAAYVHEHLP-LTDGSRPVSKPAIQHKYGPNVELLTGDGIVPFGFE 118
Query: 162 HIVSHTPPHLVPEP-RVLRVIAEIARAVGSTGMAAG-----QFLDLEGEPNLVEFVQEKK 215
+ P +P R+LRVI EI+RA G GM +G + +D + +E+V +KK
Sbjct: 119 LLAGSVDPARTDDPDRILRVIIEISRAGGPEGMISGLHREEEIVDGNTSLDFIEYVCKKK 178
Query: 216 FGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVL---------YQVVDDILEAKAQTP 266
+GEM C A CG L GA ++EIQ LR +G G L +Q++D+ + K +
Sbjct: 179 YGEMHACGAACGAILGGAAEEEIQKLRNFGLYQGTLRGMMEMKNSHQLIDENIIGKLKEL 238
Query: 267 RDEEKKKKKGKS 278
EE GK+
Sbjct: 239 ALEELGGFHGKN 250
>gi|290474684|ref|YP_003467564.1| geranyltranstransferase [Xenorhabdus bovienii SS-2004]
gi|289173997|emb|CBJ80784.1| geranyltranstransferase (=farnesyldiphosphate synthase)
[Xenorhabdus bovienii SS-2004]
Length = 305
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 139/258 (53%), Gaps = 13/258 (5%)
Query: 81 GTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNH 140
G KR P + + E+FG++R + A ALE +HA SLIHDDLP MD+D RRGQP+ H
Sbjct: 49 GGKRLRPFLVYSVGEMFGLSRESLDAPALALECIHAYSLIHDDLPAMDNDDLRRGQPTCH 108
Query: 141 TVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLD 200
+G +AILAGDAL L F+ + P++ R L ++AE+A A G GM GQ LD
Sbjct: 109 IKFGESLAILAGDALQSLAFEILAKQDMPNIALSDR-LAMVAELATASGLAGMCGGQSLD 167
Query: 201 LEGEPNLVEF-----VQEKKFGEMSECSAV-CGGFLAGADDDEIQS-LRRYGRAVGVLYQ 253
LE E ++ + K G + C+AV G + AG E+ L +Y +A+G+ +Q
Sbjct: 168 LEAEGKQIDLATLEQIHRHKTGALI-CTAVRLGAYSAGQRGREVLPLLDQYSQAIGLAFQ 226
Query: 254 VVDDILEAKAQTP---RDEEKKKKKGKS-YVAFYGVEKAMEVAEELRAKAKEELDRFKKY 309
V DDIL+ T + + ++ GKS Y A G+E+A + A +L +A L +K
Sbjct: 227 VHDDILDVIGNTDVIGKRQGNDQQLGKSTYPALLGLEQAKKKARDLYEEALAALTELEKQ 286
Query: 310 GDNVLPLYSFIDYAADRE 327
N + L + +R
Sbjct: 287 SYNTVILKKLAGFIIERN 304
>gi|407979670|ref|ZP_11160480.1| geranyltranstransferase [Bacillus sp. HYC-10]
gi|407413682|gb|EKF35371.1| geranyltranstransferase [Bacillus sp. HYC-10]
Length = 296
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/249 (38%), Positives = 136/249 (54%), Gaps = 19/249 (7%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
PE + SM YS+ A G KR PV+ +A +G P CA+EM+H SLIHDDLP
Sbjct: 30 PEDLKASMLYSLKAGG-KRLRPVLVLALLNAYGKREEDGIPVGCAVEMIHTYSLIHDDLP 88
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH VYG A+LAGDAL F+ I S VP + L++I E+
Sbjct: 89 CMDDDDLRRGKPTNHKVYGEATAVLAGDALLTESFRLITSQLSDR-VPAEQKLKIIDELV 147
Query: 186 RAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
++ G+ GM GQF D+E E + E + +K G++ S G LAGA +D+I+
Sbjct: 148 KSAGALGMVGGQFDDMEAEQKQIPLSELESIHARKTGKLLTFSVAAGAMLAGASNDDIEK 207
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKK--------GKSYVAFYGVEKAMEVA 292
LR + +G+ +Q+ DDIL+ + EEK K+ +Y + + A E
Sbjct: 208 LREFSYHIGIAFQIRDDILDLEGS----EEKIGKRVGSDTANEKSTYPSLLTLSGAKEKL 263
Query: 293 EELRAKAKE 301
+E +AKE
Sbjct: 264 DEHITRAKE 272
>gi|430809186|ref|ZP_19436301.1| geranyltranstransferase [Cupriavidus sp. HMR-1]
gi|429498330|gb|EKZ96840.1| geranyltranstransferase [Cupriavidus sp. HMR-1]
Length = 294
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 148/291 (50%), Gaps = 15/291 (5%)
Query: 41 DLKTYWTTLITEIDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
D T+ + LE A+ T P ++E+MRY+VL G KR P++ AA E+ G
Sbjct: 3 DFATWMRAQGARTEAALEAALPSTDTIPHTLHEAMRYAVLGGG-KRVRPLLVHAAGEVVG 61
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
A ACA+EM+HA SL+HDD+PCMDDD RRG+P+ H Y A+L GDAL
Sbjct: 62 ATPEACDAAACAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHKAYDEATALLVGDALQSQ 121
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG-----EPNLVEFVQE 213
F IV P L E R L+V+AE+A A GS GM GQ +DL+ +E +
Sbjct: 122 AF--IVLAQTPALAAEAR-LKVVAELAVASGSVGMCGGQAIDLQNVGKAMTREALEGMHR 178
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K G + S G D + +L RY AVG+ +QVVDDIL+ A T +
Sbjct: 179 MKTGALLRASVRMGALCGNIDQAGLVALDRYAAAVGLAFQVVDDILDVTADTATLGKTAG 238
Query: 274 KKGK----SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
K +YV+ G++ A E+A +LR A E L+ F + L I
Sbjct: 239 KDAANDKPTYVSLLGLDAARELAAQLRTDAHEALEGFGARAGRLAELADLI 289
>gi|424863545|ref|ZP_18287457.1| geranylgeranyl pyrophosphate ligase, ic [SAR86 cluster bacterium
SAR86A]
gi|400756866|gb|EJP71078.1| geranylgeranyl pyrophosphate ligase, ic [SAR86 cluster bacterium
SAR86A]
Length = 288
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 148/275 (53%), Gaps = 22/275 (8%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTK-RAPPVMCVAACELFGVN 100
L + + + ++ +N+E + I ++M YS L++ RA + A F N
Sbjct: 2 LNHFLSQVRDQVSKNIE--FVIGDSNHIEKAMNYSTLSESKMIRAALIFASADTHNFLKN 59
Query: 101 RIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGF 160
+ A ++E++H SLIHDDLP MD+D RRG+ SNH V+G AILAGDAL L +
Sbjct: 60 E-SKVTLATSVELIHTYSLIHDDLPAMDNDDFRRGKKSNHIVFGEADAILAGDALQALAY 118
Query: 161 QHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN-----LVEFVQEKK 215
+ I +L E ++ R I ++ A G GM GQ LD++ E +E + K
Sbjct: 119 EIIAD--DNNLSDESKI-RAIKLLSNACGKNGMVLGQHLDIKSESKDISQMEIENIHSLK 175
Query: 216 FGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPR------DE 269
G++ EC+ + G + +++I + +GR +G+ +Q++DD LEA + + + +
Sbjct: 176 TGKLIECAVMLGQLENISSNEKI--FKSFGRNIGLAFQIIDDYLEATSSSKKLGKDINSD 233
Query: 270 EKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELD 304
EK KK +Y+ G++K++E +EEL A +E++
Sbjct: 234 EKNKK--STYINIVGIDKSLERSEELAKSAIDEIN 266
>gi|402298061|ref|ZP_10817785.1| geranyltranstransferase [Bacillus alcalophilus ATCC 27647]
gi|401726705|gb|EJS99921.1| geranyltranstransferase [Bacillus alcalophilus ATCC 27647]
Length = 293
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/285 (35%), Positives = 153/285 (53%), Gaps = 20/285 (7%)
Query: 53 IDQNLEKAI-TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACAL 111
ID+ L ++I + P + ++M YS L G KR P++ +A + F + + ACA+
Sbjct: 16 IDEKLPQSIRALNAPASLKDAMIYS-LEAGGKRIRPLLLLATLKGFDKSFETGYELACAI 74
Query: 112 EMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHL 171
EM+H SLIHDDLP MDDD RRG+P+NH V+G AILAGDAL F+ I S L
Sbjct: 75 EMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDALLTHSFERIAS---SQL 131
Query: 172 VPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVC 226
PE +V+R+I E+A A G GM GQ D+EGE + ++ K G++ S V
Sbjct: 132 APE-KVVRLIKELAIAAGPVGMIGGQVADMEGEERALTLEELTYIHNHKTGDLLTYSIVA 190
Query: 227 GGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYVA 281
G +A A +++++ LR + R +G+L+Q+ DD+L+ + + P + K +Y +
Sbjct: 191 GAIIADASEEDVERLRHFARELGLLFQIKDDLLDVEGEQELIGKPLGSDVGNNK-STYPS 249
Query: 282 FYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
G+ + EV L A L+ K N L S DY +R
Sbjct: 250 LLGLNETKEV---LNAHYDVALESLHKVSMNTNLLESLADYIKNR 291
>gi|430748056|ref|YP_007207185.1| geranylgeranyl pyrophosphate synthase [Singulisphaera acidiphila
DSM 18658]
gi|430019776|gb|AGA31490.1| geranylgeranyl pyrophosphate synthase [Singulisphaera acidiphila
DSM 18658]
Length = 340
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 138/244 (56%), Gaps = 23/244 (9%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P ++ E+MRYSVL G KR P++C+ A E G + AA P ACALE+VH SLIHDDLP
Sbjct: 76 PPRLSEAMRYSVLGGG-KRLRPILCLLAAEACGADPSAALPAACALELVHTYSLIHDDLP 134
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
MDDD RRG+P+ H + A+LAGD L L F+ + H+ P + + +A
Sbjct: 135 AMDDDDLRRGRPTCHKAFDEATAVLAGDGLLTLAFEILAQ----HVRPAEAAVACVQALA 190
Query: 186 RAVGSTGMAAGQFLDLEGE----PNL--VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
G +GM GQ DLE E P+L +E + +K G + S GG +AGAD+ +
Sbjct: 191 EGAGPSGMVGGQMADLEAEGRNDPSLEALESIHRRKTGALLRASLRMGGLVAGADETSLH 250
Query: 240 SLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK-KKKKGK-------SYVAFYGVEKAMEV 291
+L YG AVG+ +Q++DD+L+ + DE K K+ GK +Y G+E + +
Sbjct: 251 ALNIYGGAVGLAFQIIDDLLDVQG----DETKLGKRVGKDSGLGKWTYPGLLGIEGSRQR 306
Query: 292 AEEL 295
A++L
Sbjct: 307 AKQL 310
>gi|225377100|ref|ZP_03754321.1| hypothetical protein ROSEINA2194_02745 [Roseburia inulinivorans DSM
16841]
gi|225211005|gb|EEG93359.1| hypothetical protein ROSEINA2194_02745 [Roseburia inulinivorans DSM
16841]
Length = 303
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 143/268 (53%), Gaps = 18/268 (6%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITVK--YPEQIYESMRYSVLAKGTKRAPPVMCVAAC 94
+ + D++ T + EI+Q +++ + + + + I E+M YS+LA G KR P++
Sbjct: 5 AAELDIRAEIQTRVDEIEQIIKRYLPEEEGWQKTIMEAMNYSILA-GGKRLRPMLMSETY 63
Query: 95 ELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDA 154
LFG P A+EM+H SL+HDDLP MD+D RRG+ + H VYG + ILAGDA
Sbjct: 64 RLFGGKSKVIEPFMAAMEMIHTYSLVHDDLPAMDNDEYRRGKKTTHAVYGEAMGILAGDA 123
Query: 155 LFPLGFQHIVSHTPPHLVPEPR-VLRVIAEIARAVGSTGMAAGQFLDLEGEPN------L 207
L F+ + + P+ R + + + +A G GM GQ +D++ E +
Sbjct: 124 LLNYAFE--TAAKAFDMEPDNRNIGKAMQILATKAGIYGMVGGQVVDVQSEDSGDITKEK 181
Query: 208 VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQ--- 264
++F+ K G + E S + G LAGA +E ++ + VG+ +Q+ DDIL+ +
Sbjct: 182 LDFIYRLKTGALIESSMLIGAVLAGATKNEQNTIEKAATEVGLAFQIQDDILDVTSTLEV 241
Query: 265 --TPRDEEKKKKKGKSYVAFYGVEKAME 290
P ++K K +YV+F G+EKA E
Sbjct: 242 LGKPIGSDEKNHKA-TYVSFEGLEKAKE 268
>gi|313672239|ref|YP_004050350.1| farnesyl-diphosphate synthase [Calditerrivibrio nitroreducens DSM
19672]
gi|312938995|gb|ADR18187.1| farnesyl-diphosphate synthase [Calditerrivibrio nitroreducens DSM
19672]
Length = 298
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/300 (33%), Positives = 157/300 (52%), Gaps = 15/300 (5%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACEL 96
+ D+ Y ++D LE+ + +Y + + E+MRYS+ A G KR P + ++ +
Sbjct: 2 KLDINNYIKFWAKKVDSWLEQYVISNSQYIDGLVEAMRYSLFA-GGKRLRPALIYSSFGI 60
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
F P A A+EM+H SLIHDDLP MDDD RRG+P+NH VYG +AILAGDAL
Sbjct: 61 FDGYFDKVTPFAAAVEMLHTYSLIHDDLPAMDDDDLRRGKPTNHVVYGEGVAILAGDALL 120
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFV 211
F+ + S + V +L ++A A G GM GQ+ DL+ E V F+
Sbjct: 121 TKAFEIMTSSSLNPDVDPVMMLEAANKLAIATGEKGMVGGQYADLKAEGGFFNDGTVSFI 180
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT----PR 267
K + G L A D+E + + ++G+ +G+ +Q++DDIL+ T
Sbjct: 181 HLNKTAALISYCCELGAILGYATDEEKKDMSQFGKKIGLAFQIIDDILDLTCTTEELGKN 240
Query: 268 DEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+ KK+ +Y A +G+EK+ ++A++L A LD KYG+ +PL + +R+
Sbjct: 241 AKSDLKKEKATYPAIFGIEKSRKIADDLIFSAFGILD---KYGEAAVPLRELASFVVERK 297
>gi|373494873|ref|ZP_09585470.1| hypothetical protein HMPREF0380_01108 [Eubacterium infirmum F0142]
gi|371967235|gb|EHO84707.1| hypothetical protein HMPREF0380_01108 [Eubacterium infirmum F0142]
Length = 297
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/250 (38%), Positives = 140/250 (56%), Gaps = 19/250 (7%)
Query: 69 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMD 128
+YESM YS+ A G KR PV+ +AACE G N + A P ACA+E +H SLIHDDLP MD
Sbjct: 30 LYESMVYSLTAGG-KRLRPVLLLAACEFAGGNSVEALPFACAMEYIHTYSLIHDDLPAMD 88
Query: 129 DDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHL-VPEPRVLRVIAE--IA 185
DD RRG+P+NH ++G +A LAGD L F+ + + + P+ R+ A IA
Sbjct: 89 DDDLRRGKPTNHKIFGDGMATLAGDGLLNTAFEVMNKNLLMYFDKPDELKKRINAMYCIA 148
Query: 186 RAVGSTGMAAGQFLDLEGEPN-----LVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM AGQ D+E E L+E++ K G + + G +L ADD+ +++
Sbjct: 149 KAAGVGGMIAGQASDIENENTDCTNELLEYIHINKTGALITAAVRAGLYLGNADDEMVKN 208
Query: 241 LRRYGRAVGVLYQVVDDILEAKA-------QTPRDEEKKKKKGKSYVAFYGVEKAMEVAE 293
+ +Y +G+ +Q+ DDIL+ K T D K K +Y++ G+E ++ E
Sbjct: 209 MTKYAECMGLAFQIADDILDVKGNPEKLGKNTGADAAKSK---TTYISVNGLENSVNRLE 265
Query: 294 ELRAKAKEEL 303
EL +A E +
Sbjct: 266 ELTDQAVEAI 275
>gi|294791863|ref|ZP_06757011.1| geranyltranstransferase [Veillonella sp. 6_1_27]
gi|294457093|gb|EFG25455.1| geranyltranstransferase [Veillonella sp. 6_1_27]
Length = 292
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/271 (33%), Positives = 137/271 (50%), Gaps = 20/271 (7%)
Query: 67 EQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPC 126
EQ+YESM YS++ +G KR P++ A E+ CA+E +H SL+HDDLP
Sbjct: 29 EQLYESMNYSLM-QGGKRIRPILTKAVLEMLHKEPADYKEFLCAMECIHTYSLVHDDLPA 87
Query: 127 MDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIAR 186
MD+D RRG +NH VYG +AILAGD L FQ + S+T + + L I +A
Sbjct: 88 MDNDDYRRGNLTNHKVYGEGLAILAGDGLLTYAFQLMTSNT---VASAQQKLDAIKCVAT 144
Query: 187 AVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSL 241
A G GM GQ DL E + + + K G + S G L A++ +L
Sbjct: 145 AAGPEGMVGGQAFDLLSEDKHIPLEELKVLHTGKTGALFNASVELGLILGSANNTTRTAL 204
Query: 242 RRYGRAVGVLYQVVDDIL------EAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEEL 295
Y +G+L+Q+ DDIL E +TP + ++ K +YV+ G+E+A A +
Sbjct: 205 MEYSNCLGLLFQITDDILDVTGTIEELGKTPGSDIRQHK--STYVSLLGLEQAKHQAYLV 262
Query: 296 RAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
++A + L+ Y +L + IDY +R
Sbjct: 263 GSQAHDALN-LVSYDTTILS--ALIDYLLER 290
>gi|302392484|ref|YP_003828304.1| farnesyl-diphosphate synthase [Acetohalobium arabaticum DSM 5501]
gi|302204561|gb|ADL13239.1| farnesyl-diphosphate synthase [Acetohalobium arabaticum DSM 5501]
Length = 295
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/270 (36%), Positives = 151/270 (55%), Gaps = 19/270 (7%)
Query: 64 KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDD 123
K P ++++SMRYS L G + P + + A LFGV P A A+E+VH SLIHDD
Sbjct: 27 KKPAKLHQSMRYSTLMGGKRLRPVLTLIVANSLFGVEEERIMPAAAAVELVHNYSLIHDD 86
Query: 124 LPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAE 183
LPCMDDD RRG+ +NH V+G IA+L+GDAL F+ +++ E ++L+V E
Sbjct: 87 LPCMDDDDYRRGELANHKVFGDAIAVLSGDALLTYAFE-LLTKLEGDFTAE-QILKVSKE 144
Query: 184 IARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEI 238
+A+ G GM GQ D+ E V EF+ K G + + + G L GAD +E+
Sbjct: 145 VAQGAGFRGMVGGQAADMLAEGKAVEDIDLEFIHRYKTGALLQAAVRTGAILGGADKEEL 204
Query: 239 QSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKK-----KGKSYVAF---YGVEKAME 290
+L Y +G+ +Q++DDIL+ DEEK K +G+ F YG+E++
Sbjct: 205 AALTIYAENIGLSFQIIDDILD----IVGDEEKLGKEVGSDEGQDKATFPSVYGLEESRA 260
Query: 291 VAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+A++ AKE ++RF++ + ++ L +I
Sbjct: 261 MAQKKVQAAKEAIERFEEDAELLIQLADYI 290
>gi|317122006|ref|YP_004102009.1| farnesyl-diphosphate synthase [Thermaerobacter marianensis DSM
12885]
gi|315591986|gb|ADU51282.1| farnesyl-diphosphate synthase [Thermaerobacter marianensis DSM
12885]
Length = 308
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/254 (38%), Positives = 136/254 (53%), Gaps = 19/254 (7%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACAL----EMVHAASLIH 121
P +I+E+MRYS LA G K PV+ +AA G A P E+VH SLIH
Sbjct: 38 PARIHEAMRYSALAGG-KLLRPVLVMAAARCVGGPE-AVTPAVRRAAAAVELVHTYSLIH 95
Query: 122 DDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRV-LRV 180
DDLP MDDD RRGQP+NH V+G +AILAGDAL L F+ + P +P V L V
Sbjct: 96 DDLPAMDDDAMRRGQPANHVVFGEAMAILAGDALLTLAFEVLAGL--PRWGADPAVALAV 153
Query: 181 IAEIARAVGSTGMAAGQFLDL---EGEP---NLVEFVQEKKFGEMSECSAVCGGFLAGAD 234
E+ARA G+ G+ GQ DL +G P ++ + +K G + G LAGA
Sbjct: 154 AEELARAAGTAGLIGGQVDDLDAVQGAPLDLARLQSIHRRKTGALFRACVRMGARLAGAG 213
Query: 235 DDEIQSLRRYGRAVGVLYQVVDDILEA---KAQTPRDEEKKKKKGKSYV-AFYGVEKAME 290
+ E+++L Y A G +Q+VDDIL+ +A+ + ++GK V G+E+A
Sbjct: 214 EGELEALTAYATAFGEAFQIVDDILDVTGDEAELGKPVGSDARRGKVTVPGLVGLERARR 273
Query: 291 VAEELRAKAKEELD 304
+A E +A LD
Sbjct: 274 LAAEATERAVASLD 287
>gi|42783297|ref|NP_980544.1| geranyltranstransferase [Bacillus cereus ATCC 10987]
gi|206976353|ref|ZP_03237261.1| geranyltranstransferase [Bacillus cereus H3081.97]
gi|217961668|ref|YP_002340238.1| geranyltranstransferase [Bacillus cereus AH187]
gi|229140912|ref|ZP_04269456.1| Geranyltranstransferase [Bacillus cereus BDRD-ST26]
gi|375286185|ref|YP_005106624.1| geranyltranstransferase [Bacillus cereus NC7401]
gi|402555688|ref|YP_006596959.1| geranyltranstransferase [Bacillus cereus FRI-35]
gi|423354675|ref|ZP_17332300.1| hypothetical protein IAU_02749 [Bacillus cereus IS075]
gi|423374004|ref|ZP_17351343.1| hypothetical protein IC5_03059 [Bacillus cereus AND1407]
gi|423566860|ref|ZP_17543107.1| hypothetical protein II7_00083 [Bacillus cereus MSX-A12]
gi|42739225|gb|AAS43152.1| geranyltranstransferase [Bacillus cereus ATCC 10987]
gi|206745549|gb|EDZ56948.1| geranyltranstransferase [Bacillus cereus H3081.97]
gi|217065600|gb|ACJ79850.1| geranyltranstransferase [Bacillus cereus AH187]
gi|228642488|gb|EEK98775.1| Geranyltranstransferase [Bacillus cereus BDRD-ST26]
gi|358354712|dbj|BAL19884.1| geranyltranstransferase [Bacillus cereus NC7401]
gi|401086223|gb|EJP94450.1| hypothetical protein IAU_02749 [Bacillus cereus IS075]
gi|401094819|gb|EJQ02889.1| hypothetical protein IC5_03059 [Bacillus cereus AND1407]
gi|401215375|gb|EJR22092.1| hypothetical protein II7_00083 [Bacillus cereus MSX-A12]
gi|401796898|gb|AFQ10757.1| geranyltranstransferase [Bacillus cereus FRI-35]
Length = 296
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 150/267 (56%), Gaps = 17/267 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + E+M YS L G KR P++ A + FG + ACALEM+H SL+HDDLP
Sbjct: 30 PNVLREAMAYS-LEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLVHDDLP 88
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH V+G +A+LAGD L FQ I+++ + E +V R++ E+A
Sbjct: 89 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKV-RLVLELA 147
Query: 186 RAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM GQ D+E E + +E++ + K G++ E + + G L+ A +++ +
Sbjct: 148 KAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSNATEEQEEK 207
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVAE 293
L + + +G+ +Q+ DDIL+ + +EE K G +Y + V++A ++ E
Sbjct: 208 LLEFAKYIGLAFQIRDDILDVEGT---EEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILE 264
Query: 294 ELRAKAKEELDRFKKYGDNVLPLYSFI 320
E AKAK+ + + + +L + I
Sbjct: 265 ETIAKAKDAISSLQLQDEYLLSICDLI 291
>gi|383757523|ref|YP_005436508.1| geranyltranstransferase [Rubrivivax gelatinosus IL144]
gi|381378192|dbj|BAL95009.1| geranyltranstransferase [Rubrivivax gelatinosus IL144]
Length = 296
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/281 (36%), Positives = 149/281 (53%), Gaps = 19/281 (6%)
Query: 36 RSTQFDLKTYWTT-LITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAAC 94
R+ FD +W + ++ LE + P + E+MRY VL G KR P++ +AAC
Sbjct: 3 RTLNFD---HWARHQLDAVEAALETWVPEDAPAGLGEAMRYGVL-DGGKRLRPLLVLAAC 58
Query: 95 ELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDA 154
E G +R AA +A A+E++HA SL+HDD+PCMD+D RRG+P+ H YG A+LAGDA
Sbjct: 59 EALGGSREAALRSAAAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVKYGEAQAMLAGDA 118
Query: 155 LFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMA------AGQFLDLEGEPNLV 208
+ L F+ + V + R++R++A A G G G+ LD E L
Sbjct: 119 MQALAFEILTPDEGVEPVLQARLVRLLARAAGHAGMAGGQAIDLANTGRMLD---EATLR 175
Query: 209 EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL---EAKAQT 265
E KK G + S G Q+L YG A+G+ +QVVDDIL +A +
Sbjct: 176 EM-HRKKTGALLLASVQMGAACGSPTPATWQALSVYGEAIGLAFQVVDDILDCTQASDKL 234
Query: 266 PRDEEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDR 305
+ K ++ K +YV+ G+E A A+ELRA+A L+R
Sbjct: 235 GKTAGKDQEANKPTYVSVLGLEPARRYAQELRAQALAALER 275
>gi|315639632|ref|ZP_07894772.1| geranyltranstransferase [Enterococcus italicus DSM 15952]
gi|315484593|gb|EFU75049.1| geranyltranstransferase [Enterococcus italicus DSM 15952]
Length = 289
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 135/260 (51%), Gaps = 28/260 (10%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNR 101
L++ T++T I + + EQ+ ESMRYSV A G KR P++ + L+ N
Sbjct: 8 LESVEMTMLTAISEQTNE-------EQLAESMRYSVEAGG-KRIRPLLLASTYALYQKNV 59
Query: 102 IAAF-PTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGF 160
A A A+E+VH SLIHDDLP MD+D RRG+P+NH V+G +AILAGD L L F
Sbjct: 60 SQAVCQVAAAVELVHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEALAILAGDGLLTLAF 119
Query: 161 QHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----VQEKK 215
Q + L + +V + +A+ G+ GM AGQ D+E E + + +K
Sbjct: 120 QVL---GQAELADDKKV-ACLTLLAQTAGTLGMVAGQAADIEAEGKQLSLEQLQGIHARK 175
Query: 216 FGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP-------RD 268
GE+ S + GG + GA E L + R +G+ +Q+ DD+L+ A T RD
Sbjct: 176 TGELIRFSVIAGGIIGGASAKEQAQLDSFARKLGLAFQIKDDLLDVLATTEELGKTAHRD 235
Query: 269 EEKKKKKGKSYVAFYGVEKA 288
+K +Y G++KA
Sbjct: 236 SVLQK---STYPQLLGIQKA 252
>gi|134292965|ref|YP_001116701.1| farnesyl-diphosphate synthase [Burkholderia vietnamiensis G4]
gi|387904757|ref|YP_006335095.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Burkholderia
sp. KJ006]
gi|134136122|gb|ABO57236.1| farnesyl-diphosphate synthase [Burkholderia vietnamiensis G4]
gi|387579649|gb|AFJ88364.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Burkholderia
sp. KJ006]
Length = 294
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/275 (37%), Positives = 141/275 (51%), Gaps = 25/275 (9%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P Q++E+MRY+VL G KR P++C AA EL G A A ALEM+H SL+HDD+P
Sbjct: 29 PTQLHEAMRYAVLGGG-KRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMP 87
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GDAL F + V + ++R E+A
Sbjct: 88 CMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDADALSPVQQAALVR---ELA 144
Query: 186 RAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAGA--DDDEI 238
A GS GMA GQ +DL +E + K G + +AV G LAG D +
Sbjct: 145 LASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLR-AAVRMGALAGETPSADAM 203
Query: 239 QSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEV 291
+L Y AVG+ +QVVDDIL+ T K GK +YV+ G++ + E+
Sbjct: 204 AALDVYAGAVGLAFQVVDDILDV---TTDSATLGKTAGKDAANDKPTYVSILGLDASREL 260
Query: 292 AEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
A +LRA+A D K +G L D +R
Sbjct: 261 AAQLRAEAH---DALKPFGARAQRLAELADLVVNR 292
>gi|118443490|ref|YP_878055.1| geranyltranstransferase [Clostridium novyi NT]
gi|118133946|gb|ABK60990.1| geranyltranstransferase [Clostridium novyi NT]
Length = 289
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 145/273 (53%), Gaps = 16/273 (5%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
Y + +Y++M+YSV G KR P + + ++ N P ACA+EM+H SLIHDDL
Sbjct: 24 YNKIVYDAMKYSVEV-GGKRIRPTLMLCTYNVYKDNYKDIMPMACAIEMIHTYSLIHDDL 82
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MD+D RRG+P+NH V+G +AILAGD L + +++ L + R L+ I
Sbjct: 83 PAMDNDDLRRGKPTNHKVFGEAMAILAGDGLLNEAMNIMFNYS---LNNDIRALKASKII 139
Query: 185 ARAVGSTGMAAGQFLDL--EGEP---NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
+ A G GM GQ +D+ EG+ + ++++ + K G++ + + G L A ++I
Sbjct: 140 SEASGVEGMIGGQVVDIISEGKKITIDNLKYMHKNKTGKLIKSPIIAGAILGNAPKEDID 199
Query: 240 SLRRYGRAVGVLYQVVDDILEAKAQTP---RDEEKKKKKGK-SYVAFYGVEKAMEVAEEL 295
L +G +G+ +Q+ DDIL+ ++ K K+ K ++++ +G+E ++ +L
Sbjct: 200 ILEEFGEKLGLAFQIKDDILDVIGDVKVLGKEIHKDKENNKTTFISEFGLESCKKMCIDL 259
Query: 296 RAKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
KE L+ K+ N L + REF
Sbjct: 260 ---TKECLNLLKQIQGNTRELEEITKFLMKREF 289
>gi|85713667|ref|ZP_01044657.1| polyprenyl synthetase [Nitrobacter sp. Nb-311A]
gi|85699571|gb|EAQ37438.1| polyprenyl synthetase [Nitrobacter sp. Nb-311A]
Length = 308
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/277 (36%), Positives = 141/277 (50%), Gaps = 19/277 (6%)
Query: 63 VKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHD 122
+ P+++ ++MRYS L G KR P + V + +FGV R AA ALE +H SLIHD
Sbjct: 38 IARPKRLMDAMRYSSLGGG-KRLRPFLVVESSAVFGVAREAALLAGAALECIHCYSLIHD 96
Query: 123 DLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIA 182
DLP MD+ RRG+P+ H AILAGD L L F I++ H P R+L A
Sbjct: 97 DLPAMDNSDLRRGRPTLHKTTDDATAILAGDGLLTLAFD-IITRDEVHQDPTVRLLLTRA 155
Query: 183 EIARAVGSTGMAAGQFLDLEGE-------PNLVEFVQEKKFGEMSECSAVCGGFLAGADD 235
+ARA G GM GQ LDL GE P V VQ+ K G + + G L A
Sbjct: 156 -LARAAGIGGMVGGQLLDLAGEGRFGDRGPVDVARVQQMKTGALLRFGCIAGALLGQASQ 214
Query: 236 DEIQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYVAFYGVEKAME 290
++ Q+L YGRA+G +Q+ DD+L+ + P + K ++V G++ A +
Sbjct: 215 EDYQALDTYGRALGEAFQIADDLLDVEGDAAALGKPAGADAALGK-TTFVTQLGIDGAKK 273
Query: 291 VAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+L AKA E L F G+ + F+ ADR+
Sbjct: 274 RVRDLLAKADEALSVFGTRGEVLRAAAHFV---ADRK 307
>gi|170719766|ref|YP_001747454.1| polyprenyl synthetase [Pseudomonas putida W619]
gi|169757769|gb|ACA71085.1| Polyprenyl synthetase [Pseudomonas putida W619]
Length = 295
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 157/299 (52%), Gaps = 21/299 (7%)
Query: 42 LKTYWTTLITEIDQNLEKAIT--VKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
+ Y + +D LE K E++Y +MRYSV+ G KR P++ AAC+ G
Sbjct: 2 IGAYQASSQARVDAALEPLFIAPTKELERLYAAMRYSVM-NGGKRVRPLLAYAACQALGA 60
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A ACA+E++HA SL+HDDLP MDDD RRGQP+ H + AILAGD L L
Sbjct: 61 PAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLA 120
Query: 160 FQHIVSHTPPHLVPEPRVLRV--IAEIARAVGSTGMAAGQFLDLEG-----EPNLVEFVQ 212
F ++ P L P+P +R+ + +A+A G GM AGQ +DL + +EF+
Sbjct: 121 FSALLD---PRLSPQPDAIRLAMVQALAKAAGPAGMVAGQAIDLGSVGVKLDQQALEFMH 177
Query: 213 EKKFGEMSECSAVCGGFLAG-ADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP----R 267
K G + E S G +G A+ ++ +L+ Y +A+G+ +QV DDIL+ ++ T R
Sbjct: 178 RHKTGALIEASVRLGALASGRAEQAQLDALQTYAQAIGLAFQVQDDILDVESDTATLGKR 237
Query: 268 DEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
+ +Y A G+E A A ELR +A L+ F G++ PL + Y +R
Sbjct: 238 QGADIARDKPTYPALLGLEAAKAYAIELRDQALVALEGF---GEDAEPLRALARYIVER 293
>gi|403531003|ref|YP_006665532.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
quintana RM-11]
gi|403233074|gb|AFR26817.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
quintana RM-11]
Length = 309
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 148/293 (50%), Gaps = 26/293 (8%)
Query: 48 TLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPT 107
TL+++ QN E + PE + ++MRY VL G KR P + + + LF +
Sbjct: 29 TLLSDQVQNGE----ISRPEALIKAMRYGVL-NGGKRLRPFLVIQSGALFDIPAEYCLDV 83
Query: 108 ACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHT 167
A ALE VH SLIHDDLP MD+D RRGQP+ H + AILAG+AL F+ I++H
Sbjct: 84 ASALECVHCYSLIHDDLPAMDNDTLRRGQPTVHIAFDEATAILAGNALLTFAFE-IIAHK 142
Query: 168 PPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN------LVEFVQEKKFGEMSE 221
L E R+ ++I +A++ G GM GQ LDLE E + +Q K +
Sbjct: 143 ASTLPFETRI-KLITALAQSAGLGGMIGGQMLDLEAEKKPQDSTISILTLQHMKTAALIS 201
Query: 222 CSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP-------RDEEKKKK 274
+ G + A + + L +G +G+ +Q+ DD+L+ A T +DE +K
Sbjct: 202 FACQAGAIIGNASKELTEKLAAFGTYLGLAFQLTDDLLDITASTEILGKTAGKDETAQK- 260
Query: 275 KGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
++V YG+++ + +EL AKA+ L F G PL ++A R+
Sbjct: 261 --ATFVRLYGIQETQKKRDELIAKAEALLLPF---GTKAKPLQQAAHFSATRK 308
>gi|398807911|ref|ZP_10566781.1| geranylgeranyl pyrophosphate synthase [Variovorax sp. CF313]
gi|398088542|gb|EJL79100.1| geranylgeranyl pyrophosphate synthase [Variovorax sp. CF313]
Length = 306
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/291 (36%), Positives = 158/291 (54%), Gaps = 38/291 (13%)
Query: 31 AASQLRSTQFDLKTY--WTT-LITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPP 87
+A+ L S+ +D +T W+ + ++ L + + V P + ++MRY+VL G KR P
Sbjct: 2 SAAALNSSHWDARTLAGWSDPHLANVEAALSRWVGVDAPVLLGDAMRYAVL-DGGKRLRP 60
Query: 88 VMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDI 147
++ +AA E G N+ AA ACA E++HA SL+HDDLPCMD+D RRG+P+ H +G
Sbjct: 61 LLVLAASEAVGGNQAAALRAACATELIHAYSLVHDDLPCMDNDVLRRGKPTVHVKFGEAD 120
Query: 148 AILAGDALFPLGFQHIVSHTP-PHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLE---- 202
A+LAGDAL L F+ + TP +P ++ +ARA GS GMA GQ +DL
Sbjct: 121 ALLAGDALQALAFELL---TPDGDEIPAATQAQLCRLLARAAGSQGMAGGQAIDLASVGI 177
Query: 203 --GEPNLVEFVQEKKFGEMS---ECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDD 257
E L E + K + E A CG LAG+ + +LR YG A+G+ +QVVDD
Sbjct: 178 ALNEAQLREMHRLKTGALLQGSVEMGAACGS-LAGS---ALAALRDYGAAIGLAFQVVDD 233
Query: 258 ILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKE 301
IL+ A + K GK +YV+ G++ A RA+A++
Sbjct: 234 ILDVTADS---HTLGKTAGKDAAADKPTYVSLLGLDGA-------RAQARQ 274
>gi|152976582|ref|YP_001376099.1| polyprenyl synthetase [Bacillus cytotoxicus NVH 391-98]
gi|152025334|gb|ABS23104.1| Polyprenyl synthetase [Bacillus cytotoxicus NVH 391-98]
Length = 297
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/248 (38%), Positives = 139/248 (56%), Gaps = 17/248 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + ++M YS L G KR P++ A FG R ACALEM+H SLIHDDLP
Sbjct: 31 PNVLRDAMTYS-LEAGGKRLRPLLLFATLHAFGKERELGIGAACALEMIHTYSLIHDDLP 89
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH V+G +A+LAGD L FQ + ++ + E + LR+ E+A
Sbjct: 90 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVVSAYNYEGISSEIK-LRLALELA 148
Query: 186 RAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM AGQ D+E E N +E++ + K G + E + + G LAGA +E +
Sbjct: 149 KAAGPEGMVAGQVADMEAEGKHLTLNELEYIHKHKTGRLLEFAVLAGAILAGATKEEEEK 208
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVAE 293
L + + VG+ +Q+ DDIL+ + +EE K G +Y + +++A + E
Sbjct: 209 LLAFAKYVGLAFQIRDDILDVEGT---EEEIGKPIGSDASNEKSTYTTLFAIDEAKSILE 265
Query: 294 ELRAKAKE 301
E AKAK+
Sbjct: 266 ETIAKAKD 273
>gi|384182008|ref|YP_005567770.1| geranyltranstransferase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324328092|gb|ADY23352.1| geranyltranstransferase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 296
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 150/267 (56%), Gaps = 17/267 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + E+M YS L G KR P++ A + FG + ACALEM+H SL+HDDLP
Sbjct: 30 PNVLREAMAYS-LEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLVHDDLP 88
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH V+G +A+LAGD L FQ I+++ + E +V R++ E+A
Sbjct: 89 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKV-RLVLELA 147
Query: 186 RAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM GQ D+E E + +E++ + K G++ E + + G L+ A +++ +
Sbjct: 148 KAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSNATEEQEEK 207
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVAE 293
L + + +G+ +Q+ DDIL+ + +EE K G +Y + V++A ++ E
Sbjct: 208 LLEFAKYIGLAFQIRDDILDVEGT---EEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILE 264
Query: 294 ELRAKAKEELDRFKKYGDNVLPLYSFI 320
E AKAK+ + + + +L + I
Sbjct: 265 ETIAKAKDAISSLQLQDEYLLSICDLI 291
>gi|229075886|ref|ZP_04208862.1| Geranyltranstransferase [Bacillus cereus Rock4-18]
gi|229098650|ref|ZP_04229590.1| Geranyltranstransferase [Bacillus cereus Rock3-29]
gi|229104806|ref|ZP_04235467.1| Geranyltranstransferase [Bacillus cereus Rock3-28]
gi|423441083|ref|ZP_17417989.1| hypothetical protein IEA_01413 [Bacillus cereus BAG4X2-1]
gi|423448761|ref|ZP_17425640.1| hypothetical protein IEC_03369 [Bacillus cereus BAG5O-1]
gi|423464157|ref|ZP_17440925.1| hypothetical protein IEK_01344 [Bacillus cereus BAG6O-1]
gi|423533499|ref|ZP_17509917.1| hypothetical protein IGI_01331 [Bacillus cereus HuB2-9]
gi|423541245|ref|ZP_17517636.1| hypothetical protein IGK_03337 [Bacillus cereus HuB4-10]
gi|423622735|ref|ZP_17598513.1| hypothetical protein IK3_01333 [Bacillus cereus VD148]
gi|228678679|gb|EEL32895.1| Geranyltranstransferase [Bacillus cereus Rock3-28]
gi|228684729|gb|EEL38667.1| Geranyltranstransferase [Bacillus cereus Rock3-29]
gi|228707201|gb|EEL59398.1| Geranyltranstransferase [Bacillus cereus Rock4-18]
gi|401129355|gb|EJQ37038.1| hypothetical protein IEC_03369 [Bacillus cereus BAG5O-1]
gi|401172433|gb|EJQ79654.1| hypothetical protein IGK_03337 [Bacillus cereus HuB4-10]
gi|401260855|gb|EJR67023.1| hypothetical protein IK3_01333 [Bacillus cereus VD148]
gi|402417744|gb|EJV50044.1| hypothetical protein IEA_01413 [Bacillus cereus BAG4X2-1]
gi|402420424|gb|EJV52695.1| hypothetical protein IEK_01344 [Bacillus cereus BAG6O-1]
gi|402463718|gb|EJV95418.1| hypothetical protein IGI_01331 [Bacillus cereus HuB2-9]
Length = 296
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 148/267 (55%), Gaps = 17/267 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + E+M YS L G KR P++ A + FG R ACALEM+H SL+HDDLP
Sbjct: 30 PNVLREAMAYS-LEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLP 88
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH V+G +A+LAGD L FQ ++++ + E +V R++ E+A
Sbjct: 89 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQIVMAYEQKEISAEKKV-RLVLELA 147
Query: 186 RAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM GQ D+E E + +E++ + K G++ E + + G L+ A ++ +
Sbjct: 148 KAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGAILSNATKEQEEK 207
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVAE 293
L + + +G+ +Q+ DDIL+ + +EE K G +Y + V++A + E
Sbjct: 208 LLEFAKNIGLAFQIRDDILDVEGT---EEEIGKPIGSDVSNEKSTYTTLFTVDRAKNILE 264
Query: 294 ELRAKAKEELDRFKKYGDNVLPLYSFI 320
E AKAK+ + + + +L + I
Sbjct: 265 ETIAKAKDAISSLQLQDEYLLSICDLI 291
>gi|452992580|emb|CCQ96007.1| Polyprenyl synthetase [Clostridium ultunense Esp]
Length = 289
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 146/265 (55%), Gaps = 18/265 (6%)
Query: 53 IDQNLEKAITVK--YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACA 110
ID+NL + K Y ++I+ES+ YS+ G KR P++ + +CE+ G + P A A
Sbjct: 14 IDKNLSNLLKNKIGYQKKIFESINYSLFT-GGKRLRPILLLKSCEMLGGEHKRSIPFAMA 72
Query: 111 LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPH 170
+EM+H SLIHDDLP MDDD RRG+ +NH VYG IA+L+GD L L F+ +V T +
Sbjct: 73 IEMIHTYSLIHDDLPSMDDDDFRRGRLTNHKVYGEAIAVLSGDGLLNLAFEIMVDFTLKN 132
Query: 171 ---LVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSEC 222
+ R + I EI + G GM GQ +DL + + + F+ + K + +
Sbjct: 133 SKTIEDYKRNIWAIDEIGKYSGIYGMIGGQVVDLLSNEIAMDEDKLLFMYKSKTAALIQA 192
Query: 223 SAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVAF 282
S V G L G ++I+ +RR+G +G+ YQ+ DDIL+ E K +Y++F
Sbjct: 193 SLVAGAILGGGCKEDIERMRRFGLYLGLAYQIRDDILDV-------NEDKSINKVTYLSF 245
Query: 283 YGVEKAMEVAEELRAKAKEELDRFK 307
++ A + +EL KA + LD ++
Sbjct: 246 NNIDVAKDKVDELSKKAIDVLDYYE 270
>gi|385206458|ref|ZP_10033328.1| geranylgeranyl pyrophosphate synthase [Burkholderia sp. Ch1-1]
gi|385186349|gb|EIF35623.1| geranylgeranyl pyrophosphate synthase [Burkholderia sp. Ch1-1]
Length = 293
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 100/265 (37%), Positives = 138/265 (52%), Gaps = 15/265 (5%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P ++E+MRY+VL G KR P++C AA EL G A ALEM+H SL+HDD+P
Sbjct: 29 PATLHEAMRYAVLGGG-KRVRPLLCHAAGELTGARAECLDAAAAALEMIHVYSLVHDDMP 87
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GDAL F V+ T L P + ++ E+A
Sbjct: 88 CMDDDALRRGKPTVHVKYDEATALLVGDALQSQAF---VALTSEVLAPAQQA-ALVRELA 143
Query: 186 RAVGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEMSEC----SAVCGGFLAGA--DDDEIQ 239
A GS GM GQ +DL + + Q + M +AV G LAG D D ++
Sbjct: 144 LASGSIGMCGGQAIDLASVGHTLTRTQLETMHRMKTGALLRAAVRMGALAGETPDADAMR 203
Query: 240 SLRRYGRAVGVLYQVVDDILEA---KAQTPRDEEKKKKKGK-SYVAFYGVEKAMEVAEEL 295
SL Y AVG+ +QVVDDIL+ A + K K GK +YV+ G++ + +A +L
Sbjct: 204 SLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGKDAKDGKPTYVSIIGLDASRALAAQL 263
Query: 296 RAKAKEELDRFKKYGDNVLPLYSFI 320
R+ A L F + L +
Sbjct: 264 RSDAHAALAPFGARAQRLAELADLV 288
>gi|209963898|ref|YP_002296813.1| geranylgeranyl pyrophosphate synthase [Rhodospirillum centenum SW]
gi|209957364|gb|ACI98000.1| geranylgeranyl pyrophosphate synthase [Rhodospirillum centenum SW]
Length = 296
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/293 (33%), Positives = 152/293 (51%), Gaps = 19/293 (6%)
Query: 43 KTYWTTLITEIDQNLEKAITVKYPE------QIYESMRYSVLAKGTKRAPPVMCVAACEL 96
KT + ++Q +E AI V P +++E+MRY L G KR P + + + L
Sbjct: 3 KTLTAAMADTVEQ-VEAAIDVLLPRVDLPEARLFEAMRYGCLGGG-KRLRPFLVMESARL 60
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
FGVN A A A+E +H SL+HDDLP MDD RRG+P+ H Y AILAGDAL
Sbjct: 61 FGVNPACALRAAAAVEFIHCYSLVHDDLPAMDDSDLRRGRPTLHLEYDEATAILAGDALL 120
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----V 211
+ F+ I++ H + R R+++ +A+A G GM GQ LDL E + +
Sbjct: 121 TVAFE-ILADPETHEDAQVRC-RLVSALAKAAGPRGMVGGQMLDLMAEDRTFDIGAITRL 178
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILE---AKAQTPRD 268
Q K GE+ SA G L A + +L+ Y +G+ +Q+ DD+L+ +A+T +
Sbjct: 179 QRLKTGELIAFSATAGAILGRASPPQHHALQAYAHDLGLAFQIADDLLDVEGTEAETGKS 238
Query: 269 EEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+ + K ++V+ GVE+A E A L +A LD F+ D + + ++
Sbjct: 239 VGRDEGANKATFVSILGVERAREQAGRLADQAMAHLDIFEDRADMLKQVARYV 291
>gi|21672714|ref|NP_660781.1| geranyltranstransferase [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
gi|25008653|sp|Q8K9A0.1|ISPA_BUCAP RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|21623357|gb|AAM67992.1| geranyltranstransferase [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
Length = 294
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 139/257 (54%), Gaps = 9/257 (3%)
Query: 69 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMD 128
++ +M+YS L+ G KR + A E F VN A + A+E+VH+ SLIHDDLPC+D
Sbjct: 32 LFRAMKYSTLS-GGKRLRACLIYATGETFQVNIAALDVISAAVELVHSYSLIHDDLPCID 90
Query: 129 DDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAV 188
+D RRG+ S H YG + A+LAGDAL L F + + P + R L++IAE + A+
Sbjct: 91 NDYFRRGKISCHIKYGENFALLAGDALQGLAFNILSNSNMPGVHDSIR-LKMIAEFSNAI 149
Query: 189 GSTGMAAGQFLDLEGEP---NLVEF--VQEKKFGEMSECSAVCGGFLAGADDDEIQS-LR 242
G +GM GQ LDLE E N+ E + K + CS F + E+ L
Sbjct: 150 GYSGMCIGQMLDLEKERKKINISELEKINLYKTAFLIRCSIRLAYFASNNFSKEVLFILD 209
Query: 243 RYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEE 302
++ ++G+ +Q+ DDIL+ K + E K+ K +Y G++K+ +EL +A
Sbjct: 210 KFSVSIGLAFQIQDDILDLKNDIKKLESKRNKTKNTYPLLIGLKKSKIKIKELYKEAFFT 269
Query: 303 LDRFKK-YGDNVLPLYS 318
L+ KK + N+L L +
Sbjct: 270 LEILKKNFNVNILKLLT 286
>gi|261416040|ref|YP_003249723.1| polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|385790913|ref|YP_005822036.1| geranylgeranyl diphosphate synthase [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|261372496|gb|ACX75241.1| Polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|302326253|gb|ADL25454.1| geranylgeranyl diphosphate synthase [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 295
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 140/248 (56%), Gaps = 19/248 (7%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P +++E+MRYS+ A G KR P + A ++FG + ALEM+H SLIHDDLP
Sbjct: 37 PCRLHEAMRYSMFA-GGKRLRPGLAKATFDMFGGKGEKIWLATSALEMLHTFSLIHDDLP 95
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
C+D+D RRG+ ++H +G A++AGDAL F+ ++ + + I +A
Sbjct: 96 CVDNDDYRRGKLTSHKKFGEATAVMAGDALCIHAFE---------MMGKTGNAKAIELLA 146
Query: 186 RAVGSTGMAAGQFLDLEGEPN-----LVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+G+ GM G+ D+E E +V+++ K + E S + G LA A + +++
Sbjct: 147 HLLGTYGMIGGEMTDIECEGKTVDLEIVDYIHYHKTAALIEASLLVGAMLAKASEKDMEI 206
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTP---RDEEKKKKKGK-SYVAFYGVEKAMEVAEELR 296
+R YGR++G+ +Q+VDDIL+ + T +D +KGK +Y + G+EK+ E A EL
Sbjct: 207 IRNYGRSIGLAFQIVDDILDIVSTTEELGKDAGSDIEKGKATYPSIVGLEKSRERARELY 266
Query: 297 AKAKEELD 304
++ + LD
Sbjct: 267 EESIKALD 274
>gi|229117675|ref|ZP_04247045.1| Geranyltranstransferase [Bacillus cereus Rock1-3]
gi|423377963|ref|ZP_17355247.1| hypothetical protein IC9_01316 [Bacillus cereus BAG1O-2]
gi|423547482|ref|ZP_17523840.1| hypothetical protein IGO_03917 [Bacillus cereus HuB5-5]
gi|228665767|gb|EEL21239.1| Geranyltranstransferase [Bacillus cereus Rock1-3]
gi|401179203|gb|EJQ86376.1| hypothetical protein IGO_03917 [Bacillus cereus HuB5-5]
gi|401636229|gb|EJS53983.1| hypothetical protein IC9_01316 [Bacillus cereus BAG1O-2]
Length = 296
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 149/267 (55%), Gaps = 17/267 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + E+M YS+ A G KR P++ A + FG R ACALEM+H SL+HDDLP
Sbjct: 30 PNVLREAMAYSLEA-GGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLP 88
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH V+G +A+LAGD L FQ ++++ + E +V R++ E+A
Sbjct: 89 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQIVMAYEQKEISAEKKV-RLVLELA 147
Query: 186 RAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM GQ D+E E + +E++ + K G++ E + + G L+ A ++ +
Sbjct: 148 KAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGAILSNATKEQEEK 207
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVAE 293
L + + +G+ +Q+ DDIL+ + +EE K G +Y + V++A + E
Sbjct: 208 LLEFAKNIGLAFQIRDDILDVEGT---EEEIGKPIGSDVSNEKSTYTTLFTVDRAKNILE 264
Query: 294 ELRAKAKEELDRFKKYGDNVLPLYSFI 320
E AKAK+ + + + +L + I
Sbjct: 265 ETIAKAKDAISSLQLQDEYLLSICDLI 291
>gi|254787182|ref|YP_003074611.1| geranyltranstransferase [Teredinibacter turnerae T7901]
gi|237687258|gb|ACR14522.1| geranyltranstransferase [Teredinibacter turnerae T7901]
Length = 295
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 133/270 (49%), Gaps = 20/270 (7%)
Query: 68 QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCM 127
++ E+MRYS++ G KR P + AA V A A A+E +HA SLIHDDLP M
Sbjct: 33 RVTEAMRYSLM-NGGKRIRPTLVYAAARAVSVPNEATLAGAGAVECIHAYSLIHDDLPAM 91
Query: 128 DDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARA 187
D+D RRG+P+ H + AILAGD L L F+ + + P + +I +A A
Sbjct: 92 DNDDLRRGKPTCHIAFDEATAILAGDGLQTLAFEKLSTIEDP-----ATAVAMIRTLALA 146
Query: 188 VGSTGMAAGQFLDLEGEP-------NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
G GM AGQ +D+E E + +E + K G + + + G A ++ QS
Sbjct: 147 SGDKGMVAGQMIDMESEGLQQAFTISHLEKIHRHKTGALIRAAVLMGARSVQASQEQTQS 206
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTP----RDEEKKKKKGKSYVAFYGVEKAMEVAEELR 296
L RY A+G+ +QV DDIL+ + T R + + +YV+ G+ +A E A +L
Sbjct: 207 LIRYADAIGLAFQVQDDILDVISDTATLGKRQGADLEHEKATYVSLLGLREAREKARDLH 266
Query: 297 AKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
A A L F D PL DY R
Sbjct: 267 ATALSSLQSFASSAD---PLRWVADYIVTR 293
>gi|383775087|ref|YP_005454156.1| geranyltranstransferase [Bradyrhizobium sp. S23321]
gi|381363214|dbj|BAL80044.1| geranyltranstransferase [Bradyrhizobium sp. S23321]
Length = 307
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 149/312 (47%), Gaps = 23/312 (7%)
Query: 28 PVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPP 87
P A +L T D + L++ D L I P+++ ++MRYS L G KR P
Sbjct: 6 PSDFAKRLDKTADDTEALLARLLS--DDILHDEIA--RPKRLMDAMRYSTL-NGGKRLRP 60
Query: 88 VMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDI 147
+ V + +FGV R AA ALE +H SLIHDDLP MD+ RRG+P+ H
Sbjct: 61 FLVVESAAVFGVPREAALLVGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKKTDDAT 120
Query: 148 AILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG---- 203
AILAGD L L F IV+ H R+L A +AR G GM GQ LDL G
Sbjct: 121 AILAGDGLLTLAFD-IVTRDEIHSDANVRLLLTRA-LARCAGIGGMVGGQILDLAGEGRF 178
Query: 204 ---EPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILE 260
EP V +Q+ K G + + G L A E Q+L YGRA+G +Q+ DD+L+
Sbjct: 179 GGNEPIDVARIQQMKTGALLRYGCIAGAILGQASQKEYQALDDYGRALGEAFQIADDLLD 238
Query: 261 AKAQT-----PRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLP 315
+ P + K ++V G+E A + +L A+A + F GD
Sbjct: 239 VEGDAAALGKPAGADAALGK-TTFVTQLGIEGAKQRVRDLLARADSAVSIF---GDRAAV 294
Query: 316 LYSFIDYAADRE 327
L + + A+R+
Sbjct: 295 LQAAARFVAERK 306
>gi|423483771|ref|ZP_17460461.1| hypothetical protein IEQ_03549 [Bacillus cereus BAG6X1-2]
gi|401141322|gb|EJQ48877.1| hypothetical protein IEQ_03549 [Bacillus cereus BAG6X1-2]
Length = 297
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 149/265 (56%), Gaps = 13/265 (4%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + E+M YS L G KR P++ A + FG R ACALEM+H SLIHDDLP
Sbjct: 31 PNVLREAMAYS-LEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDDLP 89
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH V+G +A+LAGD L FQ I+++ + E +V R++ E+A
Sbjct: 90 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKV-RLVFELA 148
Query: 186 RAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM AGQ D+E E + +E++ + K G++ E + + G ++ A +++ +
Sbjct: 149 KAAGPEGMVAGQVADMEAEGKRLTISELEYIHKHKTGKLLEFAVLAGAIISDATEEQEEK 208
Query: 241 LRRYGRAVGVLYQVVDDIL-----EAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEEL 295
L + + +G+ +Q+ DDIL E + P + +K +Y + V++A + EE
Sbjct: 209 LLAFAKYIGLAFQIRDDILDVEGIEEEIGKPIGSDASNEKS-TYTTLFTVDRAKSILEET 267
Query: 296 RAKAKEELDRFKKYGDNVLPLYSFI 320
AKAK+ + + + +L + I
Sbjct: 268 IAKAKDSISSLQLQDEYLLAICDLI 292
>gi|303257087|ref|ZP_07343101.1| geranyltranstransferase [Burkholderiales bacterium 1_1_47]
gi|302860578|gb|EFL83655.1| geranyltranstransferase [Burkholderiales bacterium 1_1_47]
Length = 300
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/274 (35%), Positives = 147/274 (53%), Gaps = 28/274 (10%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P++++ +MRYSV+ G KR P++ A +++ + TA A+E VH+ SLIHDDLP
Sbjct: 31 PQKLHSAMRYSVIG-GGKRVRPLLVYAVGQIYDADPENLDLTALAVECVHSYSLIHDDLP 89
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMD+D R G+P+ HT +G +A+LAGDAL P F +V P E R+ +++ +A
Sbjct: 90 CMDNDILRHGKPTTHTAFGEAVAMLAGDALQPEAFLFLVRTKLP---AEQRI-KLVELLA 145
Query: 186 RAVGSTGMAAGQFLDLEGEPNLVEFVQE------KKFGEMSECSAVCGGFLAGA---DDD 236
A + GM GQ +DL N ++E K G + + S + G F AG
Sbjct: 146 YASSTRGMCGGQAIDLSVVGNQKMTIEELRLMHSMKTGALLKASVLLGAF-AGKKTPSQH 204
Query: 237 EIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAM 289
++ L YG A+G+ +Q+VDDIL+ T E K GK +YV+ G+EKA
Sbjct: 205 DLSQLEVYGNAIGLAFQIVDDILDVVGDTA---ELGKTAGKDALGDKPTYVSLLGLEKAK 261
Query: 290 EVAEE---LRAKAKEELDRFKKYGDNVLPLYSFI 320
E+AEE + AKA E L + ++ + FI
Sbjct: 262 ELAEEQYLIAAKAVEGLSEDLDGKERLIEIADFI 295
>gi|430821353|ref|ZP_19439964.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0045]
gi|430829524|ref|ZP_19447617.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0269]
gi|430869899|ref|ZP_19483054.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1575]
gi|431745460|ref|ZP_19534304.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2134]
gi|430438616|gb|ELA49033.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0045]
gi|430480963|gb|ELA58134.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0269]
gi|430559276|gb|ELA98635.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1575]
gi|430610216|gb|ELB47368.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2134]
Length = 296
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/252 (34%), Positives = 134/252 (53%), Gaps = 19/252 (7%)
Query: 69 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMD 128
+Y++M YSV A G + P ++ A + + A ALEMVH SLIHDDLP MD
Sbjct: 31 LYDAMSYSVKAGGKRIRPLLLLTAVASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPAMD 90
Query: 129 DDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAV 188
+D RRG+P+NH V+G +AILAGD L FQ I + HL P++L ++ ++A
Sbjct: 91 NDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLI---SMAHLGNSPKLL-LLQQLAVCA 146
Query: 189 GSTGMAAGQFLDLEGEPNLVE-----FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRR 243
GS GM AGQ D+EGE + F+ E+K G + + + GG LA ++ + L+R
Sbjct: 147 GSQGMVAGQAADIEGESKKLSLEELAFIHERKTGHLIRYALLAGGILAKQPEEILLLLQR 206
Query: 244 YGRAVGVLYQVVDDILEAKAQTP-------RDEEKKKKKGKSYVAFYGVEKAMEVAEELR 296
+G+ +Q+ DD+L+ T +DE +K +Y G+EK + E
Sbjct: 207 LAEHLGLAFQIRDDLLDVIGTTKTLGKTAGKDERMEK---NTYPRLLGLEKTRKALEIEL 263
Query: 297 AKAKEELDRFKK 308
A + +D+ ++
Sbjct: 264 LSANKIIDKLEE 275
>gi|300113747|ref|YP_003760322.1| polyprenyl synthetase [Nitrosococcus watsonii C-113]
gi|299539684|gb|ADJ28001.1| Polyprenyl synthetase [Nitrosococcus watsonii C-113]
Length = 296
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 152/289 (52%), Gaps = 17/289 (5%)
Query: 45 YWTTLITEIDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRI 102
+ L ++Q LEK + K P++++E+MRY+VL G KR P++ +A GV
Sbjct: 7 WVNALQARVEQALEKTLPPASKPPKRLHEAMRYAVLGGG-KRLRPLLTYSAGMAVGVAEA 65
Query: 103 AAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQH 162
A A A+E++HA SL+HDDLP MD+D RRGQP+ H +G A+LAGDAL L F+
Sbjct: 66 ALDAPASAVELIHAYSLVHDDLPSMDNDDLRRGQPTCHKAFGETTALLAGDALQALAFRI 125
Query: 163 IVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFG 217
+ P +P + ++ +A A GS GMA GQ +DL+ + +E + K G
Sbjct: 126 LAE--PASTIPAENQINMLKLLAEAAGSRGMAGGQAIDLDSVGIQLTLSEMETMHRLKTG 183
Query: 218 EMSECSAVCGGFLAGA-DDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEK 271
+ S + G + A D I+ L + + +G+ +Q+ DD+L+ ++ T P+ +K
Sbjct: 184 ALIRASVLLGAWCQPAITQDTIEKLDHFAQCIGLAFQIQDDVLDVESDTATLGKPQGSDK 243
Query: 272 KKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+ K +Y + G+ +A A+ L A + L +++ L FI
Sbjct: 244 AQDK-PTYPSLLGLIQAKARAQSLLEDAHQALRAIDASTEHLEWLADFI 291
>gi|381165921|ref|ZP_09875140.1| Geranyltranstransferase [Phaeospirillum molischianum DSM 120]
gi|380684905|emb|CCG39952.1| Geranyltranstransferase [Phaeospirillum molischianum DSM 120]
Length = 301
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 149/280 (53%), Gaps = 18/280 (6%)
Query: 52 EIDQNLEKAITVKYPE-QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACA 110
E+D+ L +A PE ++ E+MRYS L G KR P + + + LF V AA ACA
Sbjct: 24 ELDRLLPQA---DGPENRVIEAMRYSSL-DGGKRLRPFLVMQSASLFRVAESAAIRVACA 79
Query: 111 LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPH 170
+EM+H SLIHDDLPCMD+D RRG+P+ H + A+LAGDAL F+ + + P
Sbjct: 80 IEMIHCYSLIHDDLPCMDNDDLRRGRPTCHRHFDESTALLAGDALQTRAFEVLAN---PA 136
Query: 171 LVPEPRV-LRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----VQEKKFGEMSECSA 224
P+P+V +++E+A A G GM GQ +DL+ ++ +Q+ K G + S
Sbjct: 137 THPDPQVRCDLVSELAHASGGLGMVGGQTIDLQAHTLDLDVAGITRLQQMKTGRLFSFSC 196
Query: 225 VCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA---QTPRDEEKKKKKGK-SYV 280
G L + +LR Y +G+ +Q+ DDIL+ + + + +K GK ++V
Sbjct: 197 EAGAVLGKGHGELRLALRNYSHDLGLAFQIADDILDVEGDAEEVGKQVQKDADAGKATFV 256
Query: 281 AFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+ G+++A A L +A LD F + D + + F+
Sbjct: 257 SLLGLDRARSQAAMLAEQACRHLDPFGEAADLMRDVARFV 296
>gi|222097624|ref|YP_002531681.1| geranyltranstransferase [Bacillus cereus Q1]
gi|221241682|gb|ACM14392.1| geranyltranstransferase [Bacillus cereus Q1]
Length = 296
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 150/267 (56%), Gaps = 17/267 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + E+M YS L G KR P++ A + FG + ACALEMVH SL+HDDLP
Sbjct: 30 PNVLREAMAYS-LEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMVHTYSLVHDDLP 88
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH V+G +A+LAGD L FQ I+++ + E +V R++ E+A
Sbjct: 89 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKV-RLVLELA 147
Query: 186 RAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM GQ D+E E + +E++ + K G++ E + + G L+ A +++ +
Sbjct: 148 KAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEEK 207
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVAE 293
L + + +G+ +Q+ DDIL+ + +EE K G +Y + V++A ++ E
Sbjct: 208 LLEFAKYIGLAFQIRDDILDVEGT---EEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILE 264
Query: 294 ELRAKAKEELDRFKKYGDNVLPLYSFI 320
E AKAK+ + + + +L + I
Sbjct: 265 ETIAKAKDAISSLQLQDEYLLSICDLI 291
>gi|312143726|ref|YP_003995172.1| polyprenyl synthetase [Halanaerobium hydrogeniformans]
gi|311904377|gb|ADQ14818.1| Polyprenyl synthetase [Halanaerobium hydrogeniformans]
Length = 294
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/289 (35%), Positives = 159/289 (55%), Gaps = 22/289 (7%)
Query: 52 EIDQNLEKAITVKYPE---QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTA 108
E++ +LE+ + +K E ++ E+MRY++L+ G KR P++ + EL + AA +
Sbjct: 14 ELENSLEELMELKEDELAPELSEAMRYTLLS-GGKRIRPILTLLTTELLKGDYQAALKSG 72
Query: 109 CALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTP 168
ALEM+H+ SLIHDDLP MDDD RRG+ +NH V+G AILAGDAL F+ I+S
Sbjct: 73 SALEMIHSYSLIHDDLPAMDDDQLRRGKKTNHLVFGEAKAILAGDALLTYAFE-ILS--- 128
Query: 169 PHLVPEP-RVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEKKF-----GEMSEC 222
L EP + +++I IA G GM GQ LD++ E + + +K G + +
Sbjct: 129 -ELELEPAKKIKIIKLIASNSGMLGMVGGQTLDIDAEKKELSLAEMQKIHAAKTGALIKA 187
Query: 223 SAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK----KKKKGKS 278
S + G + + E ++L++Y +GVL+QVVDD+L+ T + +K +K +
Sbjct: 188 SVLSGVYCSVYSRTEKEALQKYAENLGVLFQVVDDLLDVTGDTEKLGKKVGSDQKLDKST 247
Query: 279 YVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
Y GV+ A E A E KAK L F++ + PL +DY R+
Sbjct: 248 YPKLLGVDGAREAAVEYAKKAKNSLAIFEEEAE---PLIKLVDYVLSRQ 293
>gi|225873275|ref|YP_002754734.1| geranylgeranyl diphosphate synthase [Acidobacterium capsulatum ATCC
51196]
gi|225791637|gb|ACO31727.1| geranylgeranyl diphosphate synthase [Acidobacterium capsulatum ATCC
51196]
Length = 300
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 147/304 (48%), Gaps = 30/304 (9%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITV--KYPEQIYESMRYSVLAKGTKRAPPVMCVAAC 94
S D+ + D LE+ + P I+ ++R+S A G KR PV+ + A
Sbjct: 2 SATIDVTEILRAGVEATDAALERLLPAPDAVPSSIHRAIRHSTFAGG-KRLRPVLAMEAA 60
Query: 95 ELFGVNRIAAFPTA-----CALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAI 149
+R A P A+EM+H SLIHDDLP +D+D RRG+P+ H V+G IAI
Sbjct: 61 RTLRRDR--ALPAGVEDLGAAIEMLHTYSLIHDDLPALDNDDLRRGKPTCHVVFGEAIAI 118
Query: 150 LAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGST-GMAAGQFLDLEGEPNL- 207
LAGDAL L +Q + P P + +I IA A G+ GM GQ LDLEGE
Sbjct: 119 LAGDALQTLAYQTLAQLR----CPAPATVEIIRLIAEATGTVEGMIGGQVLDLEGEGTRP 174
Query: 208 ----VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA 263
V+ + K G + S V GG AGA ++++ L +GR G+ +Q+VDD+L+
Sbjct: 175 TAESVDAIHRAKTGALIRVSIVTGGVYAGATPEDVERLTIFGRKAGLAFQIVDDVLD--- 231
Query: 264 QTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPL 316
T K GK ++ A +G+E + A L +A L+ + D + +
Sbjct: 232 MTQDSAHLGKTAGKDLATDKATWPAVFGIEASRRDAARLIDEAFAALEPYGPAADGLKTV 291
Query: 317 YSFI 320
F+
Sbjct: 292 ARFL 295
>gi|423400972|ref|ZP_17378145.1| hypothetical protein ICW_01370 [Bacillus cereus BAG2X1-2]
gi|401653962|gb|EJS71505.1| hypothetical protein ICW_01370 [Bacillus cereus BAG2X1-2]
Length = 296
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 142/247 (57%), Gaps = 17/247 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + E+M YS L G KR P++ A + FG R ACALEM+H SL+HDDLP
Sbjct: 30 PNVLREAMAYS-LGAGGKRLRPLLLFATLQAFGKERNLGIGAACALEMIHTYSLVHDDLP 88
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH V+G +A+LAGD L FQ I+++ + E +V R++ E+A
Sbjct: 89 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKV-RLVLELA 147
Query: 186 RAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM GQ D+E E + +E++ + K G++ E + + G L+ A +++ +
Sbjct: 148 KAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEEK 207
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVAE 293
L + + +G+ +Q+ DDIL+ + +EE K G +Y + V++A ++ E
Sbjct: 208 LLAFAKYIGLAFQIRDDILDVEGT---EEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILE 264
Query: 294 ELRAKAK 300
E AKAK
Sbjct: 265 ETIAKAK 271
>gi|423615482|ref|ZP_17591316.1| hypothetical protein IIO_00808 [Bacillus cereus VD115]
gi|401260019|gb|EJR66192.1| hypothetical protein IIO_00808 [Bacillus cereus VD115]
Length = 296
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 148/267 (55%), Gaps = 17/267 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + E+M YS L G KR P++ A + FG R ACALEM+H SL+HDDLP
Sbjct: 30 PNVLREAMAYS-LEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLP 88
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH V+G +A+LAGD L FQ ++++ + E +V R++ E+A
Sbjct: 89 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQIVMAYEQKEISAEKKV-RLVLELA 147
Query: 186 RAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM GQ D+E E + +E++ + K G++ E + + G L+ A ++ +
Sbjct: 148 KAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGAILSNATKEQEEK 207
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVAE 293
L + + +G+ +Q+ DDIL+ + +EE K G +Y + V++A + E
Sbjct: 208 LLEFAKYIGLAFQIRDDILDVEGT---EEEIGKPIGSDVSNEKSTYTTLFTVDRAKNILE 264
Query: 294 ELRAKAKEELDRFKKYGDNVLPLYSFI 320
E AKAK+ + + + +L + I
Sbjct: 265 ETIAKAKDAISSLQLQDEYLLSICDLI 291
>gi|350266625|ref|YP_004877932.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349599512|gb|AEP87300.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii
TU-B-10]
Length = 296
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/240 (37%), Positives = 135/240 (56%), Gaps = 16/240 (6%)
Query: 46 WTTLITEIDQNLEKAITV-----KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVN 100
T+ + E + +E ++V P+ + ESM YS L G KR P++ +A +G +
Sbjct: 5 LTSFLAERKKTIENQLSVYTEKLDMPDSLKESMLYS-LETGGKRLRPLIVLAVLNAYGKS 63
Query: 101 RIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGF 160
P CA+EM+H SLIHDDLPCMDDD RRG+P+NH V+G A+LAGD L F
Sbjct: 64 EKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESF 123
Query: 161 QHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKK 215
+ I SH + E R LR++ E+ A G+ GM GQ D+E E V E + E+K
Sbjct: 124 KLITSHLSDEVSAEKR-LRLVNELISAAGTEGMVGGQVADMEAENRQVTLEELESIHERK 182
Query: 216 FGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKK 275
++ S + G LA A +++I++LR + R +G+ +Q+ DDIL+ + EEK K+
Sbjct: 183 TAKLLGFSVIAGAILADAPEEDIETLRTFSRHIGIGFQIRDDILDLEGS----EEKIGKR 238
>gi|78063059|ref|YP_372967.1| farnesyl-diphosphate synthase [Burkholderia sp. 383]
gi|77970944|gb|ABB12323.1| farnesyl-diphosphate synthase [Burkholderia sp. 383]
Length = 294
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 141/275 (51%), Gaps = 25/275 (9%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
PE+++E+MRY+VL G KR P++C AA EL G A A ALEM+H SL+HDD+P
Sbjct: 29 PEKLHEAMRYAVLGGG-KRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMP 87
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GDAL F + V + ++R E+A
Sbjct: 88 CMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDAAALSPVQQAALVR---ELA 144
Query: 186 RAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAGA--DDDEI 238
A GS GMA GQ +DL +E + K G + +AV G LAG + +
Sbjct: 145 LASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLR-AAVRMGALAGETPSAETM 203
Query: 239 QSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEV 291
+L Y AVG+ +QVVDDIL+ T K GK +YV+ G+E + E+
Sbjct: 204 AALDVYAGAVGLAFQVVDDILDV---TTDSATLGKTAGKDAANDKPTYVSILGLEASREL 260
Query: 292 AEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
A +LR +A D K +G L D +R
Sbjct: 261 AAQLRTEAH---DALKPFGARAQRLAELADLVVNR 292
>gi|282850211|ref|ZP_06259590.1| putative geranyltranstransferase [Veillonella parvula ATCC 17745]
gi|282579704|gb|EFB85108.1| putative geranyltranstransferase [Veillonella parvula ATCC 17745]
Length = 292
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/271 (33%), Positives = 137/271 (50%), Gaps = 20/271 (7%)
Query: 67 EQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPC 126
EQ+YESM YS++ +G KR P++ A E+ CA+E +H SL+HDDLP
Sbjct: 29 EQLYESMNYSLM-QGGKRIRPILTKAVLEMLHKEPADYKEFLCAMECIHTYSLVHDDLPA 87
Query: 127 MDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIAR 186
MD+D RRG +NH VYG +AILAGD L FQ + S+T + + L I +A
Sbjct: 88 MDNDDYRRGNLTNHKVYGEGLAILAGDGLLTYAFQLMTSNT---VASAQQKLDAIQCVAT 144
Query: 187 AVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSL 241
A G GM GQ DL E + + + K G + S G L A++ +L
Sbjct: 145 AAGPEGMVGGQAFDLLSEDKHIPLEELKVLHSGKTGALFNASVELGLILGCANNTTRTAL 204
Query: 242 RRYGRAVGVLYQVVDDIL------EAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEEL 295
Y +G+L+Q+ DDIL E +TP + ++ K +YV+ G+E+A A +
Sbjct: 205 MEYSNCLGLLFQITDDILDVTGTIEELGKTPGSDIRQHK--STYVSLLGLEQAKHQAYLV 262
Query: 296 RAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
++A + L+ Y +L + IDY +R
Sbjct: 263 GSQAHDALN-LVSYDTTILS--ALIDYLLER 290
>gi|225388185|ref|ZP_03757909.1| hypothetical protein CLOSTASPAR_01920 [Clostridium asparagiforme
DSM 15981]
gi|225045743|gb|EEG55989.1| hypothetical protein CLOSTASPAR_01920 [Clostridium asparagiforme
DSM 15981]
Length = 303
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 98/291 (33%), Positives = 153/291 (52%), Gaps = 20/291 (6%)
Query: 52 EIDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRI-AAFPTA 108
EI+Q +E + + + + E+M YS+ A G KR P++ C LF + + P
Sbjct: 17 EIEQIIEPYLPEETGHQKTVLEAMNYSMKAGG-KRLRPMLMQEVCRLFTGDVLDCVIPFM 75
Query: 109 CALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTP 168
A+EM+H +SL+HDDLPCMDDD RRG+PS YG DI +L GDAL F+
Sbjct: 76 AAVEMIHTSSLVHDDLPCMDDDRLRRGKPSTWAEYGEDIGVLTGDALMMYAFETAARAFE 135
Query: 169 PHLVPE--PRVLRVIAEIARAVGSTGMAAGQFLDLE--GEP---NLVEFVQEKKFGEMSE 221
+ P+ + R I +A G+ GM GQ +D+E G + ++F+ K G + E
Sbjct: 136 TSIDPDEISAIGRSIGILAHKTGAFGMIGGQTVDVELAGSDIPRDKLDFIYRLKTGALLE 195
Query: 222 CSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL-----EAKAQTPRDEEKKKKKG 276
S + G L GA +++ + + R +G+ +Q+ DDIL EA+ P + + K
Sbjct: 196 ASMLIGAVLGGAAEEDCKIVERLASHIGMAFQIQDDILDVTGSEAELGKPAGSDARNGK- 254
Query: 277 KSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+YV G+EKA + E+L A+A E+L++ G+N L + I DR+
Sbjct: 255 TTYVTLEGLEKAKKDVEQLSAQAIEDLEQLP--GNNEF-LENLIRMLMDRK 302
>gi|15606136|ref|NP_213513.1| geranylgeranyl pyrophosphate synthase [Aquifex aeolicus VF5]
gi|6225572|sp|O66952.1|ISPA_AQUAE RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|2983323|gb|AAC06913.1| geranylgeranyl pyrophosphate synthase [Aquifex aeolicus VF5]
Length = 262
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 119/213 (55%), Gaps = 3/213 (1%)
Query: 48 TLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPT 107
T +I++ L + + + PE++ E+M+Y L KG KR P+ VA G N A
Sbjct: 6 TWKEKIEKRLNEILKPEGPEELIEAMKYYPLQKG-KRIRPLFTVAVASALGGNEDDAITV 64
Query: 108 ACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHT 167
+E++H SLIHDDLPCMD+D RRG P+ H +G +A+LAGDAL F+ +
Sbjct: 65 GSGIELIHNYSLIHDDLPCMDNDVWRRGLPTCHIKFGEAMALLAGDALLTYTFEVLSQRE 124
Query: 168 PPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEMSECSAVCG 227
+ +L + IA+ GS GM GQ LD++G +L E V KK G + E +CG
Sbjct: 125 NYKTLSCEEILEINKIIAQKAGSNGMVGGQVLDIKGYEDLYE-VSVKKTGALFEACFMCG 183
Query: 228 GFLAGADDDEIQSLRRYGRAVGVLYQVVDDILE 260
+A ++++ + GR VG+L+Q+VDD L+
Sbjct: 184 AVVA-KRREKLKEMESIGRKVGLLFQMVDDYLD 215
>gi|409407601|ref|ZP_11256052.1| geranyltranstransferase [Herbaspirillum sp. GW103]
gi|386433352|gb|EIJ46178.1| geranyltranstransferase [Herbaspirillum sp. GW103]
Length = 311
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 140/276 (50%), Gaps = 20/276 (7%)
Query: 62 TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIH 121
T P +++E+MRY+ + +G KR P++ AA ++F R+ A A+EM+H SL+H
Sbjct: 34 TSVVPARLHEAMRYTAM-EGGKRVRPLLVYAAGDIFATPRVLLDRAAAAVEMIHVYSLVH 92
Query: 122 DDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHI-------VSHTPPHLVPE 174
DD+PCMDDD RRG+P+ H Y A+L GDAL F+ + + P L
Sbjct: 93 DDMPCMDDDALRRGKPTVHVQYDEATALLVGDALQAQAFETLSAPLEAELGQHDPGL--S 150
Query: 175 PRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEMSECSAVCGGFLAGA- 233
R LR++ +A+A GS GM GQ +DL + + ++ + + + L GA
Sbjct: 151 ARQLRMVNLLAQAAGSVGMCGGQAIDLASVGMTLSLAELEQMHRLKTGALLRAAVLLGAL 210
Query: 234 -----DDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK----SYVAFYG 284
DE +L Y RA+G+ +QVVDDIL+A A + + K +YV+ G
Sbjct: 211 GGKALTADESAALDEYARAIGLAFQVVDDILDATADSATLGKTAGKDAADNKPTYVSILG 270
Query: 285 VEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+ ++ +AE+LR A L F + + L I
Sbjct: 271 LAESQALAEKLRGNAHAALLPFGEKARRLRELADLI 306
>gi|423395520|ref|ZP_17372721.1| hypothetical protein ICU_01214 [Bacillus cereus BAG2X1-1]
gi|423406396|ref|ZP_17383545.1| hypothetical protein ICY_01081 [Bacillus cereus BAG2X1-3]
gi|401654931|gb|EJS72470.1| hypothetical protein ICU_01214 [Bacillus cereus BAG2X1-1]
gi|401660390|gb|EJS77872.1| hypothetical protein ICY_01081 [Bacillus cereus BAG2X1-3]
Length = 296
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 94/267 (35%), Positives = 149/267 (55%), Gaps = 17/267 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + E+M YS L G KR P++ A + FG R ACALEM+H SLIHDDLP
Sbjct: 30 PNVLREAMAYS-LEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDDLP 88
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH V+G +A+LAGD L FQ I+++ + E +V R++ E+A
Sbjct: 89 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYDQKEISAEKKV-RLVLELA 147
Query: 186 RAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM GQ D+E E + +E++ + K G++ E + + G L+ A +++ +
Sbjct: 148 KAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEYAVLAGAILSDATEEQEEQ 207
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVAE 293
L + + +G+ +Q+ DDIL+ + +EE K G +Y + V++A + E
Sbjct: 208 LLVFAKNIGLAFQIRDDILDVEGN---EEEIGKPIGSDVSNEKSTYTTLFTVDRAKAILE 264
Query: 294 ELRAKAKEELDRFKKYGDNVLPLYSFI 320
E AKAK+ + + + +L + I
Sbjct: 265 ETIAKAKDAISSLQLQDEYLLSICDVI 291
>gi|125600856|gb|EAZ40432.1| hypothetical protein OsJ_24885 [Oryza sativa Japonica Group]
Length = 333
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 138/261 (52%), Gaps = 14/261 (5%)
Query: 73 MRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPS 132
MRY++LA G + P + A G R P A A EMVH SL+HDD PCMDDD
Sbjct: 1 MRYALLAAGNRVGPALSLAAFPRCSGARRPWPLPAAAAFEMVHTLSLVHDDFPCMDDDDF 60
Query: 133 RRGQPSNHTVYGVDIAILAGDALFPLGFQHIV--SHTPPHLVPE---PRVLRVIAEIARA 187
RRG+P+ H VYG IA+L GDAL L F H+ PP + + RV+R I E+AR
Sbjct: 61 RRGKPTCHVVYGEPIAVLTGDALLSLSFHHMARFDSYPPDIDADKHPARVVRAIGELARC 120
Query: 188 VGSTGMAAGQFLDLE--GEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+GS G+ AGQ +DLE G V E++ K + E S V G L G D++I+S
Sbjct: 121 IGSEGLVAGQVVDLEMTGSTETVPLERLEYIHLHKTAALLEASVVIGAILGGGSDEQIES 180
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAK 300
LR Y R++G+L+QVVD + +T E + A +E ++ + L +
Sbjct: 181 LRMYARSIGLLFQVVDLEMTGSTETVPLERLEYIHLHKTAAL--LEASVVIGAILGGGSD 238
Query: 301 EELDRFKKYGDNVLPLYSFID 321
E+++ + Y ++ L+ +D
Sbjct: 239 EQIESLRMYARSIGLLFQVVD 259
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 70/127 (55%), Gaps = 12/127 (9%)
Query: 208 VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPR 267
+E++ K + E S V G L G D++I+SLR Y R++G+L+QVVDDIL+ T
Sbjct: 211 LEYIHLHKTAALLEASVVIGAILGGGSDEQIESLRMYARSIGLLFQVVDDILDV---TKS 267
Query: 268 DEEKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
EE K GK +Y G+EK+ E AE+L + A+E+L F + + PL
Sbjct: 268 SEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDAREQLSGFDQ--ETAAPLLHLA 325
Query: 321 DYAADRE 327
+Y A R+
Sbjct: 326 NYIAYRQ 332
>gi|269797982|ref|YP_003311882.1| polyprenyl synthetase [Veillonella parvula DSM 2008]
gi|269094611|gb|ACZ24602.1| Polyprenyl synthetase [Veillonella parvula DSM 2008]
Length = 292
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 92/271 (33%), Positives = 136/271 (50%), Gaps = 20/271 (7%)
Query: 67 EQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPC 126
EQ+YESM YS++ +G KR P++ A E+ CA+E +H SL+HDDLP
Sbjct: 29 EQLYESMNYSLM-QGGKRIRPILTKAVLEMLHKEPADYKEFLCAMECIHTYSLVHDDLPA 87
Query: 127 MDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIAR 186
MD+D RRG +NH VYG +AILAGD L FQ + S+T + + L I +A
Sbjct: 88 MDNDDYRRGNLTNHKVYGEGLAILAGDGLLTYAFQLMTSNT---VASAQQKLDAIKCVAT 144
Query: 187 AVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSL 241
A G GM GQ DL E + + + K G + S G L A+ +L
Sbjct: 145 AAGPEGMVGGQAFDLLSEDKHIPLEELKVLHTGKTGALFNASVELGLILGSANKTTRTAL 204
Query: 242 RRYGRAVGVLYQVVDDIL------EAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEEL 295
Y +G+L+Q+ DDIL E +TP + ++ K +YV+ G+E+A A +
Sbjct: 205 MEYSNCLGLLFQITDDILDVTGTIEELGKTPGSDIRQHK--STYVSLLGLEQAKHQAYLV 262
Query: 296 RAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
++A + L+ Y +L + IDY +R
Sbjct: 263 GSQAHDALN-LVSYDTTILS--ALIDYLLER 290
>gi|421780541|ref|ZP_16217029.1| geranyltranstransferase [Moraxella catarrhalis RH4]
gi|407812229|gb|EKF83015.1| geranyltranstransferase [Moraxella catarrhalis RH4]
Length = 351
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 151/289 (52%), Gaps = 37/289 (12%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELF---------GVNRIAAFPTAC----ALE 112
PE + ++ RY+ ++ G KR P++ ++ + N C A+E
Sbjct: 74 PEPLNKACRYA-MSNGGKRVRPLLVLSTFLMLIQTGDHKNHKNNLTKKLQMVCRAMMAVE 132
Query: 113 MVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLV 172
++H+ SLIHDDLPCMDDD RRGQP+ H VYG D+A+LAGDAL + F+ + +
Sbjct: 133 LIHSYSLIHDDLPCMDDDALRRGQPTCHIVYGEDVALLAGDALQSIAFEVLFECYDKNSA 192
Query: 173 PEP---RVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSA 224
+ ++ ++++ AR M +GQ LD++GE + +E + K G + E +
Sbjct: 193 DDAIAYKLAKLLSCRARR-----MVSGQMLDIKGENQMLSQDKLEAIHRDKTGALIEAAV 247
Query: 225 VCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSY 279
+ G A D + L+ Y RA+G+ +QV DD+L+ A T P ++K +K +Y
Sbjct: 248 MMGAICADVQTDTLGYLKHYARAIGLAFQVQDDVLDITADTITLGKPAGSDEKLEKS-TY 306
Query: 280 VAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
V GV+ A E A +L +A+ ++ K +GDN L L D+ R+F
Sbjct: 307 VKLLGVKGAQEYANQLFEEARSQV---KYWGDNNL-LLQITDWLQTRKF 351
>gi|94311552|ref|YP_584762.1| geranyltranstransferase [Cupriavidus metallidurans CH34]
gi|93355404|gb|ABF09493.1| geranyltranstransferase [Cupriavidus metallidurans CH34]
Length = 294
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 148/291 (50%), Gaps = 15/291 (5%)
Query: 41 DLKTYWTTLITEIDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
D T+ + LE A+ T P ++E+MRY+VL G KR P++ AA E+ G
Sbjct: 3 DFATWMRAQGARTEAALEAALPSTDTIPYTLHEAMRYAVLGGG-KRVRPLLVHAAGEVVG 61
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
A ACA+EM+HA SL+HDD+PCMDDD RRG+P+ H Y A+L GDAL
Sbjct: 62 ATPEACDAAACAVEMIHAYSLVHDDMPCMDDDDLRRGRPTVHKAYDEATALLVGDALQSQ 121
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG-----EPNLVEFVQE 213
F IV P L E R L+V+AE+A A GS GM GQ +DL+ +E +
Sbjct: 122 AF--IVLAQTPALAAEAR-LKVVAELAVASGSIGMCGGQAIDLQNVGKAMTREALEGMHR 178
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K G + S G D + +L RY AVG+ +QVVDDIL+ A T +
Sbjct: 179 MKTGALLRASVRMGALCGNIDQAGLVALDRYAAAVGLAFQVVDDILDVTADTATLGKTAG 238
Query: 274 KKGK----SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
K +YV+ G++ A E+A +LR A E L+ F + L I
Sbjct: 239 KDAANDKPTYVSLLGLDAARELAAQLRTDAHEALEGFGTRAGRLAELADLI 289
>gi|115358000|ref|YP_775138.1| polyprenyl synthetase [Burkholderia ambifaria AMMD]
gi|115283288|gb|ABI88804.1| farnesyl-diphosphate synthase [Burkholderia ambifaria AMMD]
Length = 294
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 103/274 (37%), Positives = 140/274 (51%), Gaps = 23/274 (8%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P Q++E+MRY+VL G KR P++C AA EL G A A ALEM+H SL+HDD+P
Sbjct: 29 PTQLHEAMRYAVLGGG-KRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMP 87
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GDAL F + V + ++R E+A
Sbjct: 88 CMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDADALSPVQQAALVR---ELA 144
Query: 186 RAVGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEMSEC----SAVCGGFLAGA--DDDEIQ 239
A GS GMA GQ +DL + Q +K M +AV G LAG + +
Sbjct: 145 LASGSIGMAGGQAIDLASVGLKLTREQLEKMHRMKTGALLRAAVRMGALAGETPSAETLA 204
Query: 240 SLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVA 292
+L Y AVG+ +QVVDDIL+ T K GK +YV+ G++ + E+A
Sbjct: 205 ALDVYAAAVGLAFQVVDDILDV---TTDSATLGKTAGKDAANDKPTYVSILGLDASRELA 261
Query: 293 EELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
+LRA+A D K +G L D +R
Sbjct: 262 AQLRAEAH---DALKPFGARAQRLAELADLVVNR 292
>gi|229198305|ref|ZP_04325012.1| Geranyltranstransferase [Bacillus cereus m1293]
gi|423574135|ref|ZP_17550254.1| hypothetical protein II9_01356 [Bacillus cereus MSX-D12]
gi|423604168|ref|ZP_17580061.1| hypothetical protein IIK_00749 [Bacillus cereus VD102]
gi|228585184|gb|EEK43295.1| Geranyltranstransferase [Bacillus cereus m1293]
gi|401212704|gb|EJR19447.1| hypothetical protein II9_01356 [Bacillus cereus MSX-D12]
gi|401245854|gb|EJR52207.1| hypothetical protein IIK_00749 [Bacillus cereus VD102]
Length = 296
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 150/267 (56%), Gaps = 17/267 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + E+M YS L G KR P++ A + FG + ACALEM+H SL+HDDLP
Sbjct: 30 PNVLREAMAYS-LEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLVHDDLP 88
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH V+G +A+LAGD L FQ I+++ + E +V R++ E+A
Sbjct: 89 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKV-RLVLELA 147
Query: 186 RAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM GQ D+E E + +E++ + K G++ E + + G L+ A +++ +
Sbjct: 148 KAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEEK 207
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVAE 293
L + + +G+ +Q+ DDIL+ + +EE K G +Y + V++A ++ E
Sbjct: 208 LLEFAKYIGLAFQIRDDILDVEGT---EEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILE 264
Query: 294 ELRAKAKEELDRFKKYGDNVLPLYSFI 320
E AKAK+ + + + +L + I
Sbjct: 265 ETIAKAKDAISSLQLQDEYLLSICDLI 291
>gi|229174855|ref|ZP_04302375.1| Geranyltranstransferase [Bacillus cereus MM3]
gi|423478323|ref|ZP_17455038.1| hypothetical protein IEO_03781 [Bacillus cereus BAG6X1-1]
gi|228608523|gb|EEK65825.1| Geranyltranstransferase [Bacillus cereus MM3]
gi|402428485|gb|EJV60582.1| hypothetical protein IEO_03781 [Bacillus cereus BAG6X1-1]
Length = 296
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 142/247 (57%), Gaps = 17/247 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + E+M YS L G KR P++ A + FG R ACALEM+H SL+HDDLP
Sbjct: 30 PNVLREAMAYS-LEAGGKRLRPLLLFATLQAFGKERNLGIGAACALEMIHTYSLVHDDLP 88
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH V+G +A+LAGD L FQ I+++ + E +V R++ E+A
Sbjct: 89 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKV-RLVLELA 147
Query: 186 RAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM GQ D+E E + +E++ + K G++ E + + G L+ A +++ +
Sbjct: 148 KAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEEK 207
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVAE 293
L + + +G+ +Q+ DDIL+ + +EE K G +Y + V++A ++ E
Sbjct: 208 LLAFAKYIGLAFQIRDDILDVEGT---EEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILE 264
Query: 294 ELRAKAK 300
E AKAK
Sbjct: 265 ETIAKAK 271
>gi|147776970|emb|CAN63418.1| hypothetical protein VITISV_007690 [Vitis vinifera]
Length = 298
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 144/301 (47%), Gaps = 47/301 (15%)
Query: 35 LRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAAC 94
+R T +YW ++ +ID +L + IT++ P +++ M + A AP +C+AAC
Sbjct: 30 IRVTMAQKSSYWNSINDDIDAHLRRVITIREPFSVFKPMHHLTFAAPETTAP-ALCIAAC 88
Query: 95 ELFGVNRIAAFPTACALEMVHAASLIHDDLPCMD----DDPSRRGQPSNHTVYGVDIAIL 150
ELFG R A A AL ++HAAS H+ +P D + P R G +G +I +L
Sbjct: 89 ELFGGRRELAIAAASALHLMHAASYFHEHIPLTDQTRPNSPPRPG-----PTFGPNIELL 143
Query: 151 AGDALFPLGFQHIVSHTPPHLVPE--PRVLRVIAEIARAVGSTGMAAGQFLDLE------ 202
GD + P G + + E R+L+VI E+ R +GS G+ GQ++ +
Sbjct: 144 TGDGMIPFGLELLAKSNNLDDDDEHSDRILQVIIELTRXIGSQGVVNGQYIQAQCDESSP 203
Query: 203 --GEPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILE 260
G+ V +KK E+ C A CG L G + EI+ LR+YG G + ++
Sbjct: 204 SVGKAGSTRIVTDKKGTELHACGAACGAILGGGKEKEIEKLRKYGFYAGTIQKM------ 257
Query: 261 AKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+ EE VEK EV EE+R A +EL+ F + + V P+ SFI
Sbjct: 258 -----SKLEE--------------VEKNREVIEEMRRLALKELEYFDE--EKVEPISSFI 296
Query: 321 D 321
+
Sbjct: 297 N 297
>gi|225460953|ref|XP_002278023.1| PREDICTED: geranylgeranyl pyrophosphate synthase-related protein,
chloroplastic [Vitis vinifera]
Length = 298
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 142/297 (47%), Gaps = 39/297 (13%)
Query: 35 LRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAAC 94
+R T +YWT++ +ID +L + I ++ P +++ M + A AP +C+AAC
Sbjct: 30 IRVTMAQKSSYWTSINDDIDAHLRRVIAIREPFSVFKPMHHLTFAAPETTAP-ALCIAAC 88
Query: 95 ELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDA 154
EL G R A A AL ++HAAS H+ +P + D P P +G +I +L GD
Sbjct: 89 ELVGGRRELAIAAASALHLMHAASYFHEHIP-LTDQPRANSPPRPGPTFGPNIELLTGDG 147
Query: 155 LFPLGFQHIVSHTPPHLVPE--PRVLRVIAEIARAVGSTGMAAGQFLDLE--------GE 204
+ P G + + E R+L+VI E+ R +GS G+ GQ++ + G+
Sbjct: 148 MIPFGLELLAKSNNLDDDDEHSDRILQVIIELTRTIGSQGVVNGQYIQAQCDESSPSVGK 207
Query: 205 PNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQ 264
V +KK E+ C A CG L G + EI+ LR+YG G + ++
Sbjct: 208 AGSTRIVTDKKGTELHACGAACGAILGGGKEKEIEKLRKYGFYAGTIQKM---------- 257
Query: 265 TPRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFID 321
+ EE VEK EV EE+R A +EL+ F + + V P+ SFI+
Sbjct: 258 -SKLEE--------------VEKNREVIEEMRRLALKELEYFDE--EKVEPISSFIN 297
>gi|167031589|ref|YP_001666820.1| polyprenyl synthetase [Pseudomonas putida GB-1]
gi|166858077|gb|ABY96484.1| Polyprenyl synthetase [Pseudomonas putida GB-1]
Length = 295
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 155/299 (51%), Gaps = 21/299 (7%)
Query: 42 LKTYWTTLITEIDQNLEKAIT--VKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
+ TY + +D LE K E++Y +MRYSV+ G KR P++ AACE G
Sbjct: 2 IGTYQASCQARVDTALEPLFIAPTKELERLYAAMRYSVM-NGGKRVRPLLAYAACEALGA 60
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A ACA+E++HA SL+HDDLP MDDD RRGQP+ H + AILAGD L L
Sbjct: 61 PAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLA 120
Query: 160 FQHIVSHTPPHLVPEPRVLRV--IAEIARAVGSTGMAAGQFLDLEG-----EPNLVEFVQ 212
F ++ PHL P+ +R+ + +A+A G GM GQ +DL + +EF+
Sbjct: 121 FSALLD---PHLSPQADNIRLAMVQALAKAAGPAGMVGGQAIDLGSVGLKLDQQALEFMH 177
Query: 213 EKKFGEMSECSAVCGGFL-AGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP----R 267
K G + E S G A A+ ++ +L+ Y +A+G+ +QV DDIL+ ++ T R
Sbjct: 178 RHKTGALIEASVRLGALASARAEQAQLDALQTYAQAIGLAFQVQDDILDVESDTATLGKR 237
Query: 268 DEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
+ +Y A G+E A A ELR +A L + +G+ PL + Y +R
Sbjct: 238 QGADIARDKPTYPALLGLEAAKAYAIELRDQA---LIALQGFGETAEPLRALARYIVER 293
>gi|416228077|ref|ZP_11627429.1| geranyltranstransferase [Moraxella catarrhalis 46P47B1]
gi|416239484|ref|ZP_11631957.1| geranyltranstransferase [Moraxella catarrhalis BC1]
gi|326564543|gb|EGE14769.1| geranyltranstransferase [Moraxella catarrhalis 46P47B1]
gi|326567053|gb|EGE17175.1| geranyltranstransferase [Moraxella catarrhalis BC1]
Length = 351
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 152/289 (52%), Gaps = 37/289 (12%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELF--------GVNRIAA-----FPTACALE 112
PE + ++ RY+ ++ G KR P++ ++ + N + F A+E
Sbjct: 74 PEPLNKACRYA-MSNGGKRVRPLLVLSTFLMLIQTGDHKNHKNNLTKKIQMLFRAMMAVE 132
Query: 113 MVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLV 172
++H+ SLIHDDLPCMDDD RRGQP+ H VYG D+A+LAGDAL + F+ + +
Sbjct: 133 LIHSYSLIHDDLPCMDDDALRRGQPTCHIVYGEDVALLAGDALQSIAFEVLFECYDKNSA 192
Query: 173 PEP---RVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSA 224
+ ++ ++++ AR M +GQ LD++GE + +E + K G + E +
Sbjct: 193 DDAIAYKLAKLLSCRARR-----MVSGQMLDIKGENQMLSQDKLEAIHRDKTGALIEAAV 247
Query: 225 VCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSY 279
+ G A D + L+ Y RA+G+ +QV DD+L+ A T P ++K +K +Y
Sbjct: 248 MMGAICADVQTDTLGYLKHYARAIGLAFQVQDDVLDITADTITLGKPAGSDEKLEKS-TY 306
Query: 280 VAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
V GV+ A E A +L +A+ ++ K +GDN L L D+ R+F
Sbjct: 307 VKLLGVKGAQEYANQLFEEARSQV---KYWGDNNL-LLQITDWLQTRKF 351
>gi|374307438|ref|YP_005053869.1| geranyltranstransferase [Filifactor alocis ATCC 35896]
gi|291166548|gb|EFE28594.1| geranyltranstransferase [Filifactor alocis ATCC 35896]
Length = 296
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 88/230 (38%), Positives = 137/230 (59%), Gaps = 10/230 (4%)
Query: 71 ESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDD 130
ESM YS+LA G KR P++C+ + +L+ ++ A P A ALEM+H SLIHDDLP MDDD
Sbjct: 38 ESMNYSLLA-GGKRIRPILCLQSADLYHISNEAILPYASALEMIHTYSLIHDDLPAMDDD 96
Query: 131 PSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGS 190
RRG+P+NH VYG IAILAGD L L ++ I+ + H + + L+ + IA+A G
Sbjct: 97 DLRRGKPTNHKVYGEAIAILAGDGLLNLAYE-IMLNDLLHGYTDGK-LKAVHYIAKAAGI 154
Query: 191 TGMAAGQFLDLEGE-----PNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYG 245
GM AGQ LDL+ E +L++ + K GE+ + S + G + GA +++ +Y
Sbjct: 155 HGMVAGQVLDLQMENQRCDADLLKKIHRNKTGELLKASILAGALVGGASEEDCYYWEQYA 214
Query: 246 RAVGVLYQVVDDILE--AKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAE 293
+G+++Q+ DD+L+ + K +Y +G+EK++E+A+
Sbjct: 215 DHLGLVFQITDDMLDVIGNVELMGKNTGMDSKKNTYPQLFGLEKSVELAK 264
>gi|42521829|ref|NP_967209.1| geranyltranstransferase [Bdellovibrio bacteriovorus HD100]
gi|39574359|emb|CAE77863.1| geranyltranstransferase [Bdellovibrio bacteriovorus HD100]
Length = 289
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 127/243 (52%), Gaps = 17/243 (6%)
Query: 68 QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCM 127
++ +SM YS G KR PV+ + ELFG + P A A+EM+H SLIHDDLPCM
Sbjct: 39 ELRKSMLYSA-TNGGKRFRPVLSLLVGELFGAGKERILPFAAAVEMIHTYSLIHDDLPCM 97
Query: 128 DDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARA 187
D+D RRG+P+NH V+G D A+LAGDAL F I + + + R+++ A
Sbjct: 98 DNDDMRRGKPTNHKVFGEDFALLAGDALLTEAFMLIAENYGDNSFLVGHLTRLLSS---A 154
Query: 188 VGSTGMAAGQFLDLE-GEPNL----VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLR 242
G GM GQ +DL G+ + + + K G + + +AGA EI+SL+
Sbjct: 155 AGIRGMVGGQAIDLRAGDKQMSLEELTHLHRLKTGALIRVAVEGAAVIAGAKPTEIESLK 214
Query: 243 RYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEE 302
++G +G+ +QV DD+L D +K + +S+ G+E +++ A E
Sbjct: 215 KFGEGLGLAFQVADDVL--------DHGEKGQDLRSFTGILGLEGTKTYLKDVSASTLAE 266
Query: 303 LDR 305
L +
Sbjct: 267 LHK 269
>gi|338732838|ref|YP_004671311.1| farnesyl diphosphate synthase [Simkania negevensis Z]
gi|336482221|emb|CCB88820.1| farnesyl diphosphate synthase [Simkania negevensis Z]
Length = 293
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 139/264 (52%), Gaps = 17/264 (6%)
Query: 53 IDQNLEKAI-TVKYPEQI-YESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACA 110
I+Q L+ I V P + Y++ RYS+L KR P++ +AA E F ACA
Sbjct: 14 IEQRLQAIIPVVNSPHLLLYQAARYSLLLPA-KRIRPLLLLAALEDFDCPLEWGIDPACA 72
Query: 111 LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPH 170
LEMVH SLIHDDLPCMDDD RRG+P+ H VYG A+LAGD L F V P+
Sbjct: 73 LEMVHTYSLIHDDLPCMDDDELRRGKPTLHKVYGEAQAVLAGDFLLTYAFD--VLSQAPY 130
Query: 171 LVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EG---EPNLVEFVQEKKFGEMSECSAV 225
L E + LR+I +++ G GM GQ +D+ EG +P+ + + KK + +
Sbjct: 131 LSSETK-LRLIQLLSKRAGGEGMIGGQVIDILHEGKSIDPDTLTLMFSKKTAALLATALE 189
Query: 226 CGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL-----EAKAQTPRDEEKKKKKGKSYV 280
G +AG + ++ L G A+G+ +Q VDD+L E+K P +K K+K S +
Sbjct: 190 FGALIAGLNSEDQIHLHNAGFALGIGFQYVDDLLDVIGDESKLGKPIGSDKSKQKA-SAL 248
Query: 281 AFYGVEKAMEVAEELRAKAKEELD 304
Y E+ E A +A ELD
Sbjct: 249 TLYSEEEVQEKANACLREALSELD 272
>gi|86747642|ref|YP_484138.1| polyprenyl synthetase [Rhodopseudomonas palustris HaA2]
gi|86570670|gb|ABD05227.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris HaA2]
Length = 308
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 95/270 (35%), Positives = 135/270 (50%), Gaps = 16/270 (5%)
Query: 63 VKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHD 122
+ P ++ E++RYS L G KR P + V + +FGV+R A ALE +H SLIHD
Sbjct: 38 IARPRRLMEAIRYSTLGGG-KRLRPFLAVESAAVFGVDRAGALLVGAALECIHCYSLIHD 96
Query: 123 DLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIA 182
DLP MD+ RRG+P+ H Y AILAGDAL L F I++ H + R L +
Sbjct: 97 DLPAMDNSDLRRGRPTLHKAYDDATAILAGDALLTLAFD-IITRDEVHQDAKVR-LDLNR 154
Query: 183 EIARAVGSTGMAAGQFLDLEG-------EPNLVEFVQEKKFGEMSECSAVCGGFLAGADD 235
+AR G GM GQ LDL G EP V +Q+ K G + V G L A
Sbjct: 155 VLARCAGLGGMVGGQMLDLAGEGRFGDREPVDVARLQQMKTGALLRYGCVAGAILGQASP 214
Query: 236 DEIQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYVAFYGVEKAME 290
+ ++L YGRA+G +Q+ DD+L+ + P + K ++V GV+ A +
Sbjct: 215 EHYKALDDYGRALGEAFQIADDLLDVEGDAAALGKPAGADAALGK-TTFVTQLGVDGAKQ 273
Query: 291 VAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+L A+A E L F G+ + F+
Sbjct: 274 RVRDLIARADEALAPFGAKGEVLRAAARFV 303
>gi|47569437|ref|ZP_00240118.1| geranyltranstransferase [Bacillus cereus G9241]
gi|228987369|ref|ZP_04147489.1| Geranyltranstransferase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229157777|ref|ZP_04285852.1| Geranyltranstransferase [Bacillus cereus ATCC 4342]
gi|47553852|gb|EAL12222.1| geranyltranstransferase [Bacillus cereus G9241]
gi|228625734|gb|EEK82486.1| Geranyltranstransferase [Bacillus cereus ATCC 4342]
gi|228772341|gb|EEM20787.1| Geranyltranstransferase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 296
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 150/267 (56%), Gaps = 17/267 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + E+M YS L G KR P++ A + FG + ACALEM+H SL+HDDLP
Sbjct: 30 PNVLREAMAYS-LEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLVHDDLP 88
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH V+G +A+LAGD L FQ I+++ + E +V R++ E+A
Sbjct: 89 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKV-RLVLELA 147
Query: 186 RAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM GQ D+E E + +E++ + K G++ E + + G L+ A +++ +
Sbjct: 148 KAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEEK 207
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVAE 293
L + + +G+ +Q+ DDIL+ + +EE K G +Y + V++A ++ E
Sbjct: 208 LLEFAKYIGLAFQIRDDILDVEGT---EEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILE 264
Query: 294 ELRAKAKEELDRFKKYGDNVLPLYSFI 320
E AKAK+ + + + +L + I
Sbjct: 265 ETIAKAKDAIGSLQLQDEYLLSICDLI 291
>gi|229047874|ref|ZP_04193450.1| Geranyltranstransferase [Bacillus cereus AH676]
gi|228723331|gb|EEL74700.1| Geranyltranstransferase [Bacillus cereus AH676]
Length = 296
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 142/247 (57%), Gaps = 17/247 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + E+M YS L G KR P++ A + FG R ACALEM+H SL+HDDLP
Sbjct: 30 PNVLREAMAYS-LEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLP 88
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH V+G +A+LAGD L FQ I+++ + E +V R++ E+A
Sbjct: 89 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKV-RLVLELA 147
Query: 186 RAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM GQ D+E E + +E++ + K G++ E + + G L+ A +++ +
Sbjct: 148 KAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEK 207
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVAE 293
L + + +G+ +Q+ DDIL+ + +EE K G +Y + V++A E+ E
Sbjct: 208 LLTFAKYIGLAFQIRDDILDVEGT---EEEIGKPIGSDLSNEKSTYTTLFTVDRAKEILE 264
Query: 294 ELRAKAK 300
E A+AK
Sbjct: 265 ETIAEAK 271
>gi|452746756|ref|ZP_21946566.1| geranyltranstransferase [Pseudomonas stutzeri NF13]
gi|452009233|gb|EME01456.1| geranyltranstransferase [Pseudomonas stutzeri NF13]
Length = 296
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/290 (36%), Positives = 151/290 (52%), Gaps = 18/290 (6%)
Query: 45 YWTTLITEIDQNLEKAITVKYP--EQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRI 102
Y + +D LE P E++Y++MRYSV+ G KR P++ AACE ++
Sbjct: 6 YQKSCQQRVDSCLETLFVPPLPQLERLYQAMRYSVM-NGGKRVRPLLVYAACEALNGDKA 64
Query: 103 AAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQH 162
+A ACA+E++HA SL+HDDLP MDDD RRGQP+ H + AILAGD L L F+
Sbjct: 65 SADGGACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEA 124
Query: 163 IVS--HTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKK 215
+ H P LR+ A +ARA G GM GQ +DL + N +E + K
Sbjct: 125 MAQAEHNPQDATLR---LRMFAVLARAAGPAGMVGGQAIDLGSVGLKLDRNALELMHRHK 181
Query: 216 FGEMSECSAVCGGFLAG-ADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKK-- 272
G + E S G +G AD D + SL +Y RA+G+ +QV DDIL+ ++ T + +
Sbjct: 182 TGALIEASVQLGALASGHADADNLASLSQYARAIGLAFQVQDDILDVESDTATLGKHQGA 241
Query: 273 --KKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+ +Y A G++ A A ELR +A L F + + L +I
Sbjct: 242 DIARDKPTYPALLGMDAAKAYALELRDQALHALRPFDTAAEPLRELARYI 291
>gi|345890910|ref|ZP_08841772.1| hypothetical protein HMPREF1022_00432 [Desulfovibrio sp.
6_1_46AFAA]
gi|345048842|gb|EGW52664.1| hypothetical protein HMPREF1022_00432 [Desulfovibrio sp.
6_1_46AFAA]
Length = 297
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/236 (41%), Positives = 137/236 (58%), Gaps = 17/236 (7%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P ++ ESM YS+ A G KR PV+C++ L G+ A P A A+EM+H SLIHDDLP
Sbjct: 32 PPRLKESMLYSLQAGG-KRLRPVLCLSCAALCGLEPQKALPFAAAIEMIHTYSLIHDDLP 90
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
MDDD RRG+PSNH + AILAGD L F I+ P VP R+LR +AE+A
Sbjct: 91 AMDDDDLRRGKPSNHKAFDEATAILAGDGLLTDAFV-IMCRAP---VPPDRLLRAVAELA 146
Query: 186 RAVGSTGMAAGQFLDL----EGEPNLVEF--VQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A G++GM GQ D+ + +L E + K G + S VCGG LAGADD ++
Sbjct: 147 LAAGASGMVGGQEWDMIYTGRSQVSLEELRGMHAMKTGALLRASCVCGGLLAGADDKALR 206
Query: 240 SLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYVAFYGVEKAME 290
++ +G ++GV +Q+ DDIL+ A T P + ++ K +Y + G+EK+ E
Sbjct: 207 AISDFGSSLGVAFQIADDILDVVADTATLGKPAGSDAEQGK-NTYPSLVGLEKSRE 261
>gi|315282228|ref|ZP_07870682.1| geranyltranstransferase [Listeria marthii FSL S4-120]
gi|313614130|gb|EFR87820.1| geranyltranstransferase [Listeria marthii FSL S4-120]
Length = 293
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 126/229 (55%), Gaps = 14/229 (6%)
Query: 53 IDQNLEKAITVKYPE-QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACAL 111
ID++L K I+V+ E ++ ESM YSV A G KR P++ A + + + TA AL
Sbjct: 15 IDESLFKEISVRNIEPKLKESMLYSVQAGG-KRIRPMLVFATLQALNADPLLGVRTATAL 73
Query: 112 EMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHL 171
EM+H SLIHDDLP MD+D RRG+ +NH ++G AILAGDAL L F + +L
Sbjct: 74 EMIHTYSLIHDDLPAMDNDDYRRGKWTNHKIFGDATAILAGDALLTLAFSILAE--DENL 131
Query: 172 VPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----VQEKKFGEMSECSAVC 226
E R L +I EI+ + G+ GM GQ D+E E V + +K GE+ +
Sbjct: 132 SFETR-LALIKEISFSSGAEGMVGGQQADMEAENKQVTLEELSSIHARKTGELLIFAVTS 190
Query: 227 GGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKK 275
+A AD ++ + LR + +G+ +Q+ DDIL+ DE K KK
Sbjct: 191 AAKIAEADSEQTKRLRIFAENIGIGFQISDDILDVIG----DETKMGKK 235
>gi|395788008|ref|ZP_10467584.1| hypothetical protein ME7_00919 [Bartonella birtlesii LL-WM9]
gi|395409790|gb|EJF76375.1| hypothetical protein ME7_00919 [Bartonella birtlesii LL-WM9]
Length = 300
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 147/293 (50%), Gaps = 23/293 (7%)
Query: 46 WTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAF 105
TL++ QN E + PE + ++MRY VL G KR P + + + LF +
Sbjct: 19 LNTLLSSQPQNGE----ISRPEMLIKAMRYGVL-NGGKRLRPFLVLQSSALFDIPAENVL 73
Query: 106 PTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVS 165
ACALE VH SLIHDDLP MD+D RRG+P+ H + AILAG+AL F+ I +
Sbjct: 74 DVACALECVHCYSLIHDDLPAMDNDILRRGKPTLHKAFDEATAILAGNALLTFAFETI-A 132
Query: 166 HTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMS 220
H L + ++ ++I +A+A G GM GQ LD+E E L + +Q K +
Sbjct: 133 HKACTLSFDTKI-KLITALAQASGLGGMIGGQMLDIEAEKKLQKSKDIITLQRMKTAALI 191
Query: 221 ECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL------EAKAQTPRDEEKKKK 274
+ G +A A + + L +G +G+ +Q+ DD+L E +T +E +K
Sbjct: 192 SFACQAGALIANASKELTEKLATFGTYLGLAFQLTDDLLDFTTSSEVLGKTAGKDESAQK 251
Query: 275 KGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
++V YG+E+ + +E AKA+ L F G PL ++A R+
Sbjct: 252 --ATFVRLYGIEETQKKRDEFIAKAETLLLPF---GAKAKPLLHAAHFSATRK 299
>gi|416995849|ref|ZP_11939108.1| farnesyl-diphosphate synthase [Burkholderia sp. TJI49]
gi|325518120|gb|EGC97906.1| farnesyl-diphosphate synthase [Burkholderia sp. TJI49]
Length = 294
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 140/275 (50%), Gaps = 25/275 (9%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P Q++E+MRY+VL G KR P++C AA EL G A A ALEM+H SL+HDD+P
Sbjct: 29 PTQLHEAMRYAVLGGG-KRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMP 87
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GDAL F + V + ++R E+A
Sbjct: 88 CMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDAAALSPVQQAALVR---ELA 144
Query: 186 RAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAG--ADDDEI 238
A GS GMA GQ +DL +E + K G + +AV G LAG D +
Sbjct: 145 LASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLR-AAVRMGALAGDTPSADAM 203
Query: 239 QSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEV 291
+L Y AVG+ +QVVDDIL+ T K GK +YV+ G++ + E+
Sbjct: 204 AALDVYAGAVGLAFQVVDDILDV---TTDSATLGKTAGKDAANDKPTYVSILGLDASREL 260
Query: 292 AEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
A +LR +A D K +G L D +R
Sbjct: 261 AAQLRTEAH---DALKPFGARAQRLAELADLVVNR 292
>gi|390631100|ref|ZP_10259067.1| Geranyltranstransferase [Weissella confusa LBAE C39-2]
gi|390483660|emb|CCF31415.1| Geranyltranstransferase [Weissella confusa LBAE C39-2]
Length = 287
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 148/282 (52%), Gaps = 25/282 (8%)
Query: 48 TLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPT 107
TL TE+ Q+ + + + ++M Y+V+A G KR P++ +A + +G++
Sbjct: 17 TLATELKQSTTE-------KTLRDAMTYAVMAGG-KRLRPLLTLAVAQSYGMDVPGLVRA 68
Query: 108 ACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHT 167
A ALE++H SLIHDDLP MD+D RRG+P+ H +G D+AILAGDAL PL +Q + S
Sbjct: 69 ASALELIHTYSLIHDDLPAMDNDDMRRGKPTTHRQFGEDVAILAGDALQPLAYQWLASDP 128
Query: 168 PPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP------NLVEFVQEKKFGEMSE 221
L+ P+ + ++A A G+ GM AGQ +D+ + + + +K +
Sbjct: 129 ---LLTTPQKAELTLQLALASGANGMVAGQVMDMAATNADTITLDQAKAIHYRKTSALIA 185
Query: 222 CSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVA 281
+A+ GG +A A + + L +G A G+ +Q+ K + + ++Y
Sbjct: 186 YAAIAGGIMAHASEAVKEQLWNFGMAYGLAFQI-------KDDLDDLGQDDDEDKQAYPT 238
Query: 282 FYGVEKAMEVAEELRAKAKEELDRFKKY-GDNVLPLYSFIDY 322
GV+ A++ E A + L +F + G+++ L SF+DY
Sbjct: 239 LLGVQGAVDALREQVDLANQALQKFGELTGNDITLLVSFLDY 280
>gi|365838328|ref|ZP_09379676.1| putative geranyltranstransferase [Hafnia alvei ATCC 51873]
gi|364560109|gb|EHM38061.1| putative geranyltranstransferase [Hafnia alvei ATCC 51873]
Length = 301
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 144/272 (52%), Gaps = 15/272 (5%)
Query: 68 QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCM 127
Q+ +MRY L G KR P + A E+FG++ A A+E +HA SL+HDDLP M
Sbjct: 32 QLVAAMRYGALL-GGKRLRPYLVYATGEMFGLSLDNLDAPAAAVECIHAYSLMHDDLPAM 90
Query: 128 DDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARA 187
DDD RRGQP++H +G AILAGDAL L F + P + R L +++E+A+A
Sbjct: 91 DDDNLRRGQPTSHIKFGEAHAILAGDALQTLAFSILADSPMPDVAVSDR-LAMLSELAQA 149
Query: 188 VGSTGMAAGQFLDLEGEPNLVEF-----VQEKKFGEMSECSAVCGGFLAG-ADDDEIQSL 241
G GM GQ LDLE E V+ + K G + C+ G AG A + L
Sbjct: 150 SGVAGMCGGQALDLEAEGKHVDLQSLERIHNHKTGALIRCAIRLGALAAGDAGRAALPLL 209
Query: 242 RRYGRAVGVLYQVVDDILEA-----KAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEELR 296
RY A+G+ +QV DDIL+ K P+ +++ +K +Y + G+++A A++L
Sbjct: 210 DRYAAAIGLAFQVQDDILDVIGDSEKMGKPQGSDQELEK-STYPSLLGLKQAQNKAQDLY 268
Query: 297 AKAKEELDRFKKYGD-NVLPLYSFIDYAADRE 327
A + L+ +++ + L L S + +R+
Sbjct: 269 QDAIQVLEELEQHHSIDTLALKSLASFIIERD 300
>gi|422809443|ref|ZP_16857854.1| geranyltranstransferase [Listeria monocytogenes FSL J1-208]
gi|378753057|gb|EHY63642.1| geranyltranstransferase [Listeria monocytogenes FSL J1-208]
Length = 293
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 124/229 (54%), Gaps = 14/229 (6%)
Query: 53 IDQNLEKAITVKYPE-QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACAL 111
ID++L K I + E + ESM YSV A G KR P++ A + VN + TA AL
Sbjct: 15 IDESLFKEINERKIEPTLKESMLYSVQAGG-KRIRPMLVFATLQALKVNPLLGVKTATAL 73
Query: 112 EMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHL 171
EM+H SLIHDDLP MD+D RRG+ +NH V+G AILAGDAL L F + +L
Sbjct: 74 EMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLAFSILAE--DENL 131
Query: 172 VPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----VQEKKFGEMSECSAVC 226
E R+ +I +I+ + G+ GM GQ D+E E V + +K GE+ +
Sbjct: 132 SFETRI-ALINQISFSSGAEGMVGGQLADMEAENKQVALEELSSIHARKTGELLIFAVTS 190
Query: 227 GGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKK 275
+A AD ++ + LR + +G+ +Q+ DDIL+ DE K KK
Sbjct: 191 AAKIAEADSEQTKRLRIFAENIGIGFQISDDILDVIG----DETKMGKK 235
>gi|426402189|ref|YP_007021160.1| geranyltranstransferase [Bdellovibrio bacteriovorus str. Tiberius]
gi|425858857|gb|AFX99892.1| geranyltranstransferase [Bdellovibrio bacteriovorus str. Tiberius]
Length = 289
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 127/243 (52%), Gaps = 17/243 (6%)
Query: 68 QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCM 127
++ +SM YS G KR PV+ + ELFG + P A A+EM+H SLIHDDLPCM
Sbjct: 39 ELRKSMLYSA-TNGGKRFRPVLSLLVGELFGAGKERILPFAAAVEMIHTYSLIHDDLPCM 97
Query: 128 DDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARA 187
D+D RRG+P+NH V+G D A+LAGDAL F I + + + R+++ A
Sbjct: 98 DNDDMRRGKPTNHKVFGEDFALLAGDALLTEAFMLIAENYGDNSFLVGHLTRLLSS---A 154
Query: 188 VGSTGMAAGQFLDLE-GEPNL----VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLR 242
G GM GQ +DL G+ + + + K G + + +AGA EI+SL+
Sbjct: 155 AGIRGMVGGQAIDLRAGDRQMSLEELTHLHRLKTGALIRVAVEGAAVIAGAKPTEIESLK 214
Query: 243 RYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEE 302
++G +G+ +QV DD+L D +K + +S+ G+E +++ A E
Sbjct: 215 KFGEGLGLAFQVADDVL--------DHGEKGQDFRSFTGILGLEGTKTYLKDVSASTLAE 266
Query: 303 LDR 305
L +
Sbjct: 267 LHK 269
>gi|46907589|ref|YP_013978.1| geranyltranstransferase [Listeria monocytogenes serotype 4b str.
F2365]
gi|47093750|ref|ZP_00231500.1| geranyltranstransferase [Listeria monocytogenes str. 4b H7858]
gi|226223964|ref|YP_002758071.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|254932322|ref|ZP_05265681.1| geranyltranstransferase [Listeria monocytogenes HPB2262]
gi|386732101|ref|YP_006205597.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes
07PF0776]
gi|405749705|ref|YP_006673171.1| geranyltranstransferase [Listeria monocytogenes ATCC 19117]
gi|405752580|ref|YP_006676045.1| geranyltranstransferase [Listeria monocytogenes SLCC2378]
gi|406704134|ref|YP_006754488.1| geranyltranstransferase [Listeria monocytogenes L312]
gi|417314624|ref|ZP_12101320.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes J1816]
gi|417317507|ref|ZP_12104124.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes
J1-220]
gi|424714237|ref|YP_007014952.1| Farnesyl diphosphate synthase [Listeria monocytogenes serotype 4b
str. LL195]
gi|424823124|ref|ZP_18248137.1| Geranyltranstransferase [Listeria monocytogenes str. Scott A]
gi|46880857|gb|AAT04155.1| geranyltranstransferase [Listeria monocytogenes serotype 4b str.
F2365]
gi|47017871|gb|EAL08654.1| geranyltranstransferase [Listeria monocytogenes str. 4b H7858]
gi|225876426|emb|CAS05135.1| Putative Trans-Isoprenyl Diphosphate Synthase [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|293583878|gb|EFF95910.1| geranyltranstransferase [Listeria monocytogenes HPB2262]
gi|328467501|gb|EGF38570.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes J1816]
gi|328475077|gb|EGF45865.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes
J1-220]
gi|332311804|gb|EGJ24899.1| Geranyltranstransferase [Listeria monocytogenes str. Scott A]
gi|384390859|gb|AFH79929.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes
07PF0776]
gi|404218905|emb|CBY70269.1| geranyltranstransferase [Listeria monocytogenes ATCC 19117]
gi|404221780|emb|CBY73143.1| geranyltranstransferase [Listeria monocytogenes SLCC2378]
gi|406361164|emb|CBY67437.1| geranyltranstransferase [Listeria monocytogenes L312]
gi|424013421|emb|CCO63961.1| Farnesyl diphosphate synthase [Listeria monocytogenes serotype 4b
str. LL195]
Length = 293
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/241 (37%), Positives = 129/241 (53%), Gaps = 14/241 (5%)
Query: 41 DLKTYWTTLITEIDQNLEKAITVKYPE-QIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
DL + ID++L K I+ + E ++ ESM YSV A G KR P++ A + V
Sbjct: 3 DLTLFLEQYKKVIDESLFKEISERNIEPRLKESMLYSVQAGG-KRIRPMLVFATLQALKV 61
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
N + TA ALEM+H SLIHDDLP MD+D RRG+ +NH V+G AILAGDAL L
Sbjct: 62 NPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLA 121
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----VQEK 214
F + +L E R+ +I +I+ + G+ GM GQ D+E E V + +
Sbjct: 122 FSILAE--DENLSFETRI-ALINQISFSSGAEGMVGGQLADMEAENKQVTLEELSSIHAR 178
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKK 274
K GE+ + +A AD ++ + LR + +G+ +Q+ DDIL+ DE K K
Sbjct: 179 KTGELLIFAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIG----DETKMGK 234
Query: 275 K 275
K
Sbjct: 235 K 235
>gi|421618908|ref|ZP_16059875.1| geranyltranstransferase [Pseudomonas stutzeri KOS6]
gi|409779088|gb|EKN58762.1| geranyltranstransferase [Pseudomonas stutzeri KOS6]
Length = 295
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/290 (35%), Positives = 152/290 (52%), Gaps = 18/290 (6%)
Query: 45 YWTTLITEIDQNLEKAITVKYP--EQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRI 102
Y + +D LE P E++Y++MRYSV+ G KR P++ AACE ++
Sbjct: 5 YQKSCQQRVDGCLEALFVAPQPQLERLYQAMRYSVM-NGGKRVRPLLVYAACEALNGDKA 63
Query: 103 AAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQH 162
A ACA+E++HA SL+HDDLP MDDD RRGQP+ H + AILAGD L L F+
Sbjct: 64 NADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEA 123
Query: 163 IVS--HTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKK 215
+ H PP LR+ + +ARA G GM GQ +DL + + +E + K
Sbjct: 124 MAQDRHNPPDATLR---LRMFSVLARAAGPAGMVGGQAIDLGSVGLKLDRDALELMHRHK 180
Query: 216 FGEMSECSAVCGGFLAG-ADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKK-- 272
G + E S G +G AD D + +L +Y RA+G+ +QV DDIL+ ++ T + +
Sbjct: 181 TGALIEASVQLGALASGHADADSLAALSQYARAIGLAFQVQDDILDVESDTATLGKHQGA 240
Query: 273 --KKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+ +Y A G++ A A ELR +A L F + + + L +I
Sbjct: 241 DIARDKPTYPALLGMDAAKVYASELRDQALHALQPFDEAAEPLRELARYI 290
>gi|1229166|gb|AAB67731.1| geranylgeranyl pyrophosphate synthase, partial [Arabidopsis
thaliana]
Length = 222
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 131/206 (63%), Gaps = 19/206 (9%)
Query: 116 AASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEP 175
+SLIHDDLPCMD+ RRG+P+NH VYG D+A+LAGDAL L F+H+ + + PE
Sbjct: 1 TSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVVSSGLVAPE- 59
Query: 176 RVLRVIAEIARAVGSTGMAAGQFLDLEGE---PNLV-----EFVQEKKFGEMSECSAVCG 227
R++R + E+ARA+G+TG+ AGQ +DL E P+ V EF+ K + E +AV G
Sbjct: 60 RMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLG 119
Query: 228 GFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYV 280
+ G ++EI+ LR+Y R +G+L+QVVDDIL+ T EE K GK +Y
Sbjct: 120 VIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKST---EELGKTAGKDVMAGKLTYP 176
Query: 281 AFYGVEKAMEVAEELRAKAKEELDRF 306
G+E++ EVAE+LR +A+E+L F
Sbjct: 177 RLIGLERSKEVAEKLRREAEEQLLGF 202
>gi|16803403|ref|NP_464888.1| hypothetical protein lmo1363 [Listeria monocytogenes EGD-e]
gi|254827624|ref|ZP_05232311.1| geranyltranstransferase [Listeria monocytogenes FSL N3-165]
gi|284801748|ref|YP_003413613.1| hypothetical protein LM5578_1502 [Listeria monocytogenes 08-5578]
gi|284994890|ref|YP_003416658.1| hypothetical protein LM5923_1455 [Listeria monocytogenes 08-5923]
gi|386050339|ref|YP_005968330.1| geranyltranstransferase [Listeria monocytogenes FSL R2-561]
gi|386053616|ref|YP_005971174.1| geranyltranstransferase [Listeria monocytogenes Finland 1998]
gi|404283854|ref|YP_006684751.1| geranyltranstransferase [Listeria monocytogenes SLCC2372]
gi|405758410|ref|YP_006687686.1| geranyltranstransferase [Listeria monocytogenes SLCC2479]
gi|16410779|emb|CAC99441.1| lmo1363 [Listeria monocytogenes EGD-e]
gi|258600002|gb|EEW13327.1| geranyltranstransferase [Listeria monocytogenes FSL N3-165]
gi|284057310|gb|ADB68251.1| hypothetical protein LM5578_1502 [Listeria monocytogenes 08-5578]
gi|284060357|gb|ADB71296.1| hypothetical protein LM5923_1455 [Listeria monocytogenes 08-5923]
gi|346424185|gb|AEO25710.1| geranyltranstransferase [Listeria monocytogenes FSL R2-561]
gi|346646267|gb|AEO38892.1| geranyltranstransferase [Listeria monocytogenes Finland 1998]
gi|404233356|emb|CBY54759.1| geranyltranstransferase [Listeria monocytogenes SLCC2372]
gi|404236292|emb|CBY57694.1| geranyltranstransferase [Listeria monocytogenes SLCC2479]
gi|441471036|emb|CCQ20791.1| Farnesyl diphosphate synthase [Listeria monocytogenes]
gi|441474163|emb|CCQ23917.1| Farnesyl diphosphate synthase [Listeria monocytogenes N53-1]
Length = 293
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 125/229 (54%), Gaps = 14/229 (6%)
Query: 53 IDQNLEKAITVKYPE-QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACAL 111
ID++L K I + E ++ ESM YS+ A G KR P++ A + VN + TA AL
Sbjct: 15 IDESLFKEINERNIEPRLKESMLYSIQAGG-KRIRPMLVFATLQALKVNPLLGVKTATAL 73
Query: 112 EMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHL 171
EM+H SLIHDDLP MD+D RRG+ +NH V+G AILAGDAL L F + +L
Sbjct: 74 EMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVFGDATAILAGDALLTLAFSILAE--DDNL 131
Query: 172 VPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----VQEKKFGEMSECSAVC 226
E R+ +I +I+ + G+ GM GQ DLE E V + +K GE+ +
Sbjct: 132 SFETRI-ALINQISFSSGAEGMVGGQLADLEAENKQVTLEELSSIHARKTGELLIYAVTS 190
Query: 227 GGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKK 275
+A AD ++ + LR + +G+ +Q+ DDIL+ DE K KK
Sbjct: 191 AAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIG----DETKMGKK 235
>gi|296113743|ref|YP_003627681.1| geranyltranstransferase [Moraxella catarrhalis RH4]
gi|416216022|ref|ZP_11623423.1| geranyltranstransferase [Moraxella catarrhalis 7169]
gi|416220628|ref|ZP_11625552.1| geranyltranstransferase [Moraxella catarrhalis 103P14B1]
gi|416234051|ref|ZP_11629649.1| geranyltranstransferase [Moraxella catarrhalis 12P80B1]
gi|416243815|ref|ZP_11634080.1| geranyltranstransferase [Moraxella catarrhalis BC7]
gi|416249216|ref|ZP_11636392.1| geranyltranstransferase [Moraxella catarrhalis CO72]
gi|416256101|ref|ZP_11639521.1| geranyltranstransferase [Moraxella catarrhalis O35E]
gi|295921437|gb|ADG61788.1| geranyltranstransferase [Moraxella catarrhalis BBH18]
gi|326562092|gb|EGE12420.1| geranyltranstransferase [Moraxella catarrhalis 7169]
gi|326565728|gb|EGE15891.1| geranyltranstransferase [Moraxella catarrhalis 12P80B1]
gi|326566295|gb|EGE16447.1| geranyltranstransferase [Moraxella catarrhalis 103P14B1]
gi|326568317|gb|EGE18397.1| geranyltranstransferase [Moraxella catarrhalis BC7]
gi|326574560|gb|EGE24500.1| geranyltranstransferase [Moraxella catarrhalis O35E]
gi|326576140|gb|EGE26055.1| geranyltranstransferase [Moraxella catarrhalis CO72]
Length = 348
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 150/286 (52%), Gaps = 34/286 (11%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAA-CELFGVNRIA---------AFPTACALEMVH 115
PE + ++ RY+ ++ G KR P++ ++ L F A+E++H
Sbjct: 74 PEPLNKACRYA-MSNGGKRVRPLLVLSTFLTLIKTGHQTDDLTKKIQMLFRAMMAVELIH 132
Query: 116 AASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEP 175
+ SLIHDDLPCMDDD RRGQP+ H VYG D+A+LAGDAL + F+ + + +
Sbjct: 133 SYSLIHDDLPCMDDDALRRGQPTCHIVYGEDVALLAGDALQSIAFEVLFECYDKNSADDA 192
Query: 176 ---RVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCG 227
++ ++++ AR M +GQ LD++GE + +E + K G + E + + G
Sbjct: 193 IAYKLAKLLSCRARR-----MVSGQMLDIKGENQMLSQDKLEAIHRDKTGALIEAAVMMG 247
Query: 228 GFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYVAF 282
A D + L+ Y RA+G+ +QV DD+L+ A T P ++K +K +YV
Sbjct: 248 AICADVQTDTLGYLKHYARAIGLAFQVQDDVLDITADTITLGKPAGSDEKLEKS-TYVKL 306
Query: 283 YGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
GV+ A E A +L +A+ ++ K +GDN L L D+ R+F
Sbjct: 307 LGVKGAQEYANQLFEEARSQV---KYWGDNNL-LLQITDWLQTRKF 348
>gi|257482376|ref|ZP_05636417.1| geranyltranstransferase [Pseudomonas syringae pv. tabaci str. ATCC
11528]
gi|422594221|ref|ZP_16668512.1| geranyltranstransferase [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|422680447|ref|ZP_16738719.1| geranyltranstransferase [Pseudomonas syringae pv. tabaci str. ATCC
11528]
gi|298160570|gb|EFI01592.1| geranyltranstransferase [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|330984529|gb|EGH82632.1| geranyltranstransferase [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|331009793|gb|EGH89849.1| geranyltranstransferase [Pseudomonas syringae pv. tabaci str. ATCC
11528]
Length = 295
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/301 (37%), Positives = 155/301 (51%), Gaps = 25/301 (8%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPE--QIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
+ +Y T ++ LEK PE ++YE+MRYSV+ G KR P++ AACE G
Sbjct: 2 IASYQAQSQTRVNAALEKLFQAPSPELNRLYEAMRYSVM-NGGKRVRPLLAYAACEALGG 60
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A ACA+E++HA SL+HDDLP MDDD RRGQP+ H + AILAGD L L
Sbjct: 61 VAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLA 120
Query: 160 FQHIVSHTPPHLVP---EPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL------VEF 210
F +++ PHL E R L+++ +A A G GM GQ +DL G L +E+
Sbjct: 121 FTALLA---PHLTSRDAETR-LQMVNTLAAAAGPAGMVGGQAIDL-GSVGLKLDQAALEY 175
Query: 211 VQEKKFGEMSECSAVCGGFLAG-ADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP--- 266
+ K G + E S G +G AD + +L+ Y RAVG+ +QV DDIL+ ++ T
Sbjct: 176 MHRHKTGALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLG 235
Query: 267 -RDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAAD 325
R + +Y A G+E A A ELR +A L F + PL Y +
Sbjct: 236 KRQGADIARDKPTYPALLGLEAAKRYALELRDQALTALSTFDAAAE---PLRELARYIVE 292
Query: 326 R 326
R
Sbjct: 293 R 293
>gi|161521357|ref|YP_001584784.1| polyprenyl synthetase [Burkholderia multivorans ATCC 17616]
gi|189352476|ref|YP_001948103.1| geranyltranstransferase [Burkholderia multivorans ATCC 17616]
gi|221197059|ref|ZP_03570106.1| geranyltranstransferase [Burkholderia multivorans CGD2M]
gi|221203731|ref|ZP_03576749.1| geranyltranstransferase [Burkholderia multivorans CGD2]
gi|221212347|ref|ZP_03585324.1| geranyltranstransferase [Burkholderia multivorans CGD1]
gi|421468332|ref|ZP_15916884.1| polyprenyl synthetase [Burkholderia multivorans ATCC BAA-247]
gi|160345407|gb|ABX18492.1| Polyprenyl synthetase [Burkholderia multivorans ATCC 17616]
gi|189336498|dbj|BAG45567.1| geranyltranstransferase [Burkholderia multivorans ATCC 17616]
gi|221167446|gb|EED99915.1| geranyltranstransferase [Burkholderia multivorans CGD1]
gi|221175897|gb|EEE08326.1| geranyltranstransferase [Burkholderia multivorans CGD2]
gi|221183613|gb|EEE16013.1| geranyltranstransferase [Burkholderia multivorans CGD2M]
gi|400232187|gb|EJO61823.1| polyprenyl synthetase [Burkholderia multivorans ATCC BAA-247]
Length = 294
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 141/275 (51%), Gaps = 25/275 (9%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P +++E+MRY+VL G KR P++C AA EL G A A ALEM+H SL+HDD+P
Sbjct: 29 PARLHEAMRYAVLGGG-KRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMP 87
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GDAL F + V + ++R E+A
Sbjct: 88 CMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDAAALSPVQQAALVR---ELA 144
Query: 186 RAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAGA--DDDEI 238
A GS GMA GQ +DL +E + K G + +AV G LAG D +
Sbjct: 145 LASGSLGMAGGQAIDLASVGIKLTREQLETMHRMKTGALLR-AAVRMGALAGETPSADTM 203
Query: 239 QSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEV 291
+L Y AVG+ +QVVDDIL+ T K GK +YV+ G++ + E+
Sbjct: 204 AALDVYAGAVGLAFQVVDDILDV---TTDSATLGKTAGKDAANDKPTYVSILGLDASREL 260
Query: 292 AEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
A +LRA+A D K +G L D +R
Sbjct: 261 AAQLRAEAH---DALKPFGARAQRLAELADLVVNR 292
>gi|407706706|ref|YP_006830291.1| hypothetical protein MC28_3470 [Bacillus thuringiensis MC28]
gi|407384391|gb|AFU14892.1| Geranyltranstransferase [Bacillus thuringiensis MC28]
Length = 296
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 147/267 (55%), Gaps = 17/267 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + E+M YS L G KR P++ A + FG R ACALEM+H SL+HDDLP
Sbjct: 30 PNVLREAMAYS-LEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLP 88
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH V+G +A+LAGD L FQ ++++ + E +V R++ E+A
Sbjct: 89 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQIVMAYEQKEISAEKKV-RLVLELA 147
Query: 186 RAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM GQ D+E E + +E++ + K G++ E + + G L+ A ++ +
Sbjct: 148 KAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGAILSNATKEQEEK 207
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVAE 293
L + + +G+ +Q+ DDIL+ + +EE K G +Y + V++A + E
Sbjct: 208 LLEFAKNIGLAFQIRDDILDVEGT---EEEIGKPIGSDVSNEKSTYTTLFTVDRAKNILE 264
Query: 294 ELRAKAKEELDRFKKYGDNVLPLYSFI 320
E KAK+ + + + +L + I
Sbjct: 265 ETITKAKDAISSLQLQDEYLLSICDLI 291
>gi|206562765|ref|YP_002233528.1| putative geranyltranstransferase [Burkholderia cenocepacia J2315]
gi|444361872|ref|ZP_21162450.1| polyprenyl synthetase [Burkholderia cenocepacia BC7]
gi|444372694|ref|ZP_21172127.1| polyprenyl synthetase [Burkholderia cenocepacia K56-2Valvano]
gi|198038805|emb|CAR54767.1| putative geranyltranstransferase [Burkholderia cenocepacia J2315]
gi|443592942|gb|ELT61706.1| polyprenyl synthetase [Burkholderia cenocepacia K56-2Valvano]
gi|443597987|gb|ELT66387.1| polyprenyl synthetase [Burkholderia cenocepacia BC7]
Length = 294
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 141/275 (51%), Gaps = 25/275 (9%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P +++E+MRY+VL G KR P++C AA EL G A A ALEM+H SL+HDD+P
Sbjct: 29 PAKLHEAMRYAVLGGG-KRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMP 87
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GDAL F + V + ++R E+A
Sbjct: 88 CMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDADALSPVQQAALVR---ELA 144
Query: 186 RAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAGA--DDDEI 238
A GS GMA GQ +DL +E + K G + +AV G LAG + +
Sbjct: 145 LASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLR-AAVRMGALAGETPSTETM 203
Query: 239 QSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEV 291
+L Y AVG+ +QVVDDIL+ T K GK +YV+ G+E + E+
Sbjct: 204 AALDVYAGAVGLAFQVVDDILDV---TTDSATLGKTAGKDAANDKPTYVSILGLEASREL 260
Query: 292 AEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
A +LRA+A D K +G L D +R
Sbjct: 261 AAQLRAEAH---DALKPFGARAQRLAELADLVVNR 292
>gi|257899149|ref|ZP_05678802.1| polyprenyl synthetase [Enterococcus faecium Com15]
gi|257837061|gb|EEV62135.1| polyprenyl synthetase [Enterococcus faecium Com15]
Length = 296
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/251 (36%), Positives = 136/251 (54%), Gaps = 21/251 (8%)
Query: 71 ESMRYSVLAKGTKRAPPVMCVAACELFGV-NRIAAFPTACALEMVHAASLIHDDLPCMDD 129
++M YSV A G KR P++ +AA F + + A ALEMVH SLIHDDLP MD+
Sbjct: 33 DAMTYSVKA-GGKRIRPLLLLAAVASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPAMDN 91
Query: 130 DPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVG 189
D RRG+P+NH V+G +AILAGD L FQ I + HL P++L ++ ++A G
Sbjct: 92 DDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLI---SMAHLGHSPKLL-LLQQLAVCAG 147
Query: 190 STGMAAGQFLDLEGEPNLVE-----FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRY 244
S GM AGQ D+EGE + F+ E+K G + + + GG LA ++ + L+R
Sbjct: 148 SQGMVAGQAADIEGESKKLSLEELAFIHERKTGRLIRYALLAGGILAKQPEEILLLLQRL 207
Query: 245 GRAVGVLYQVVDDILEAKAQTP-------RDEEKKKKKGKSYVAFYGVEKAMEVAEELRA 297
+G+ +Q+ DD+L+ T +DE +K +Y G+EK E E
Sbjct: 208 AEHLGLAFQIRDDLLDVIGTTKTLGKTAGKDERMEK---NTYPRLLGLEKTHEALEIELL 264
Query: 298 KAKEELDRFKK 308
A + +D+ ++
Sbjct: 265 SANKIIDKLEE 275
>gi|421866286|ref|ZP_16297958.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase)
[Burkholderia cenocepacia H111]
gi|358073869|emb|CCE48836.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase)
[Burkholderia cenocepacia H111]
Length = 285
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 141/275 (51%), Gaps = 25/275 (9%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P +++E+MRY+VL G KR P++C AA EL G A A ALEM+H SL+HDD+P
Sbjct: 20 PAKLHEAMRYAVLGGG-KRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMP 78
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GDAL F + V + ++R E+A
Sbjct: 79 CMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDADALSPVQQAALVR---ELA 135
Query: 186 RAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAGA--DDDEI 238
A GS GMA GQ +DL +E + K G + +AV G LAG + +
Sbjct: 136 LASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLR-AAVRMGALAGETPSTETM 194
Query: 239 QSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEV 291
+L Y AVG+ +QVVDDIL+ T K GK +YV+ G+E + E+
Sbjct: 195 AALDVYAGAVGLAFQVVDDILDV---TTDSATLGKTAGKDAANDKPTYVSILGLEASREL 251
Query: 292 AEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
A +LRA+A D K +G L D +R
Sbjct: 252 AAQLRAEAH---DALKPFGARAQRLAELADLVVNR 283
>gi|167573592|ref|ZP_02366466.1| geranyltranstransferase [Burkholderia oklahomensis C6786]
Length = 294
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/255 (39%), Positives = 139/255 (54%), Gaps = 22/255 (8%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P Q++E+MRY+ L G KR P++C AA EL G + A A ALEM+H SL+HDD+P
Sbjct: 29 PAQLHEAMRYAALGGG-KRVRPLLCHAAGELTGASEAALNAAAAALEMIHVYSLVHDDMP 87
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GDAL F V+ T +P R ++ E+A
Sbjct: 88 CMDDDALRRGKPTVHVEYDEATALLVGDALQSQAF---VALTDAAALPLDRQPALVRELA 144
Query: 186 RAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAGA--DDDEI 238
A GS GMA GQ +DL + +E + K G + S V G LAG +D +
Sbjct: 145 LASGSIGMAGGQAIDLASVGHALSRDALETMHRMKTGALLRAS-VRMGALAGETPSEDAM 203
Query: 239 QSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEV 291
++L Y AVG+ +QVVDDIL+ T K GK +YV+ G++ + +
Sbjct: 204 RALDAYAAAVGLAFQVVDDILDV---TTDSATLGKTAGKDAANDKPTYVSIIGLDASRAL 260
Query: 292 AEELRAKAKEELDRF 306
A +LRA A+ L+ F
Sbjct: 261 AAQLRADARAALEPF 275
>gi|164605008|dbj|BAF98300.1| geranyl-diphosphate synthase [Hevea brasiliensis]
Length = 306
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 127/229 (55%), Gaps = 12/229 (5%)
Query: 43 KTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRI 102
++YW+++ ++D +L++AI ++ P ++E MR+ +L+ + + P +C+AACEL G +R
Sbjct: 41 QSYWSSVNADLDTHLKQAIPIRQPLAVFEPMRHLILS-APQTSAPALCIAACELVGGHRN 99
Query: 103 AAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQH 162
A A AL +VHA++ H++LP D T+YG +I +L D + P GF+
Sbjct: 100 QAMAAASALRLVHASASTHENLPLTDRPRPMPRTRP--TLYGPNIELLIADGIIPYGFEL 157
Query: 163 IVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL-----EGEP----NLVEFVQE 213
+ RVLR I EI+RA+GS G+ GQ+ + EGE ++ V
Sbjct: 158 LARDDDAAENNSNRVLRAIIEISRAMGSQGVIEGQYNESQYEESEGEEIFHVGWLQNVCR 217
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAK 262
KK G + C+ CG L G +DEI+ LRRYG VG++ ++ + E K
Sbjct: 218 KKEGTLHACAGACGAILGGGSEDEIEKLRRYGLYVGMVQGILSKVDERK 266
>gi|229031827|ref|ZP_04187815.1| Geranyltranstransferase [Bacillus cereus AH1271]
gi|228729445|gb|EEL80434.1| Geranyltranstransferase [Bacillus cereus AH1271]
Length = 296
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 149/267 (55%), Gaps = 17/267 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + E+M YS L G KR P++ A + FG R ACALEM+H SL+HDDLP
Sbjct: 30 PNVLREAMAYS-LEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLP 88
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH V+G +A+LAGD L FQ I+++ + E +V R++ E+A
Sbjct: 89 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKV-RLVLELA 147
Query: 186 RAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM GQ D+E E + +E++ + K G++ E + + G L+ A +++ +
Sbjct: 148 KAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEEK 207
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVAE 293
L + + +G+ +Q+ DDIL+ + +EE K G +Y + V++A + E
Sbjct: 208 LLAFAKYIGLAFQIRDDILDVEGT---EEEIGKPIGSDVSNEKSTYTTLFTVDRAKGILE 264
Query: 294 ELRAKAKEELDRFKKYGDNVLPLYSFI 320
E AKAK+ + + + +L + I
Sbjct: 265 ETIAKAKDAIGSLQLQDEYLLSICDLI 291
>gi|421596018|ref|ZP_16039932.1| geranyltranstransferase [Bradyrhizobium sp. CCGE-LA001]
gi|404271868|gb|EJZ35634.1| geranyltranstransferase [Bradyrhizobium sp. CCGE-LA001]
Length = 307
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 150/312 (48%), Gaps = 23/312 (7%)
Query: 28 PVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPP 87
P A++L T D + L++ D L I P+++ ++MRYS L G KR P
Sbjct: 6 PSDFANRLDKTADDTEALLGRLLS--DDILHDEIA--RPKRLMDAMRYSSL-NGGKRLRP 60
Query: 88 VMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDI 147
+ V + +FGV R AA ALE +H SLIHDDLP MD+ RRG+P+ H
Sbjct: 61 FLVVESAAVFGVPREAALLVGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKKTDDAT 120
Query: 148 AILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG---- 203
AILAGD L L F IV+ H R+L A +AR G GM GQ LDL G
Sbjct: 121 AILAGDGLLTLAFD-IVTRDEIHRDANVRLLLTRA-LARCAGIGGMVGGQILDLAGEGRF 178
Query: 204 ---EPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILE 260
EP V +Q+ K G + + G L A E Q+L YGRA+G +Q+ DD+L+
Sbjct: 179 GGNEPIDVARIQQMKTGALLRYGCIAGAILGQASQKEYQALDDYGRALGEAFQIADDLLD 238
Query: 261 AKAQT-----PRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLP 315
+ P + K ++V G++ A + +L A+A + F GD
Sbjct: 239 VEGDAAALGKPAGADAALGK-TTFVTQLGIDGAKQRVRDLLARADSAVSIF---GDRAAV 294
Query: 316 LYSFIDYAADRE 327
L + + A+R+
Sbjct: 295 LQAAARFVAERK 306
>gi|421477013|ref|ZP_15924866.1| polyprenyl synthetase [Burkholderia multivorans CF2]
gi|400227328|gb|EJO57335.1| polyprenyl synthetase [Burkholderia multivorans CF2]
Length = 294
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 141/275 (51%), Gaps = 25/275 (9%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P +++E+MRY+VL G KR P++C AA EL G A A ALEM+H SL+HDD+P
Sbjct: 29 PARLHEAMRYAVLGGG-KRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMP 87
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GDAL F + V + ++R E+A
Sbjct: 88 CMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDAAALSPVQQAALVR---ELA 144
Query: 186 RAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAG--ADDDEI 238
A GS GMA GQ +DL +E + K G + +AV G LAG D +
Sbjct: 145 LASGSLGMAGGQAIDLASVGVKLTREQLETMHRMKTGALLR-AAVRMGALAGDTPSADTM 203
Query: 239 QSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEV 291
+L Y AVG+ +QVVDDIL+ T K GK +YV+ G++ + E+
Sbjct: 204 AALDVYAGAVGLAFQVVDDILDV---TTDSATLGKTAGKDAANDKPTYVSILGLDASREL 260
Query: 292 AEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
A +LRA+A D K +G L D +R
Sbjct: 261 AAQLRAEAH---DALKPFGARAQRLAELADLVVNR 292
>gi|254824578|ref|ZP_05229579.1| geranyltranstransferase [Listeria monocytogenes FSL J1-194]
gi|293593816|gb|EFG01577.1| geranyltranstransferase [Listeria monocytogenes FSL J1-194]
Length = 293
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/241 (37%), Positives = 128/241 (53%), Gaps = 14/241 (5%)
Query: 41 DLKTYWTTLITEIDQNLEKAITVKYPE-QIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
DL + ID++L K I + E ++ ESM YSV A G KR P++ A + V
Sbjct: 3 DLTLFLEQYKKVIDESLFKEINERNIEPRLKESMLYSVQAGG-KRIRPMLVFATLQALKV 61
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
N + TA ALEM+H SLIHDDLP MD+D RRG+ +NH V+G AILAGDAL L
Sbjct: 62 NPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLA 121
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----VQEK 214
F + +L E R+ +I +I+ + G+ GM GQ D+E E V + +
Sbjct: 122 FSILAE--DENLSFETRI-ALINQISFSSGAEGMVGGQLADMEAENKQVTLEELSSIHAR 178
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKK 274
K GE+ + +A AD ++ + LR + +G+ +Q+ DDIL+ DE K K
Sbjct: 179 KTGELLIFAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIG----DETKMGK 234
Query: 275 K 275
K
Sbjct: 235 K 235
>gi|390435700|ref|ZP_10224238.1| geranyltranstransferase [Pantoea agglomerans IG1]
Length = 299
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 136/269 (50%), Gaps = 12/269 (4%)
Query: 69 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMD 128
+ +M+Y L G KR P + A E+ + + A A+E +HA SLIHDDLP MD
Sbjct: 32 LVNAMQYGALLGG-KRLRPFLVYATGEMLHADPASLDAPAAAVECIHAYSLIHDDLPAMD 90
Query: 129 DDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAV 188
DD RRGQP+ H YG D AILAGDAL L F + P + E R++ +++E+A+A
Sbjct: 91 DDALRRGQPTCHIKYGEDTAILAGDALQTLAFSILADQAMPGVSAEYRLM-MLSELAKAS 149
Query: 189 GSTGMAAGQFLDLEGEPNLVEF-----VQEKKFGEMSECSAVCGGFLAG-ADDDEIQSLR 242
G GM GQ LDL E V+ + K G + + G AG A + + L
Sbjct: 150 GVAGMCGGQALDLAAEGKSVDLDQLEQIHRHKTGALIRSAVRLGALTAGDAGREALPLLD 209
Query: 243 RYGRAVGVLYQVVDDILEAKAQTP---RDEEKKKKKGKS-YVAFYGVEKAMEVAEELRAK 298
RY A+G+ +QV DDIL+ T + + + GKS Y + G+E A A +L +
Sbjct: 210 RYAEAIGLAFQVQDDILDVIGDTAVIGKRQGADQHLGKSTYPSLLGLENAQAKARDLYQE 269
Query: 299 AKEELDRFKKYGDNVLPLYSFIDYAADRE 327
A + L+ + N L + + +R+
Sbjct: 270 ALDTLEMLAAHSYNTTALQALASFIIERD 298
>gi|228910014|ref|ZP_04073834.1| Geranyltranstransferase [Bacillus thuringiensis IBL 200]
gi|228849531|gb|EEM94365.1| Geranyltranstransferase [Bacillus thuringiensis IBL 200]
Length = 296
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/247 (36%), Positives = 142/247 (57%), Gaps = 17/247 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + E+M YS L G KR P++ A + FG R ACALEM+H SL+HDDLP
Sbjct: 30 PNVLREAMAYS-LEAGGKRLRPLLLFATLQAFGKERNLGLGAACALEMIHTYSLVHDDLP 88
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH V+G +A+LAGD L FQ I+++ + E +V R++ E+A
Sbjct: 89 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKV-RLVLELA 147
Query: 186 RAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM GQ D+E E + +E++ + K G++ E + + G L+ A +++ +
Sbjct: 148 KAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEK 207
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVAE 293
L + + +G+ +Q+ DDIL+ + +EE K G +Y + V++A ++ E
Sbjct: 208 LLTFAKYIGLAFQIRDDILDVEGT---EEEIGKPIGSDLSNEKSTYTTLFTVDRAKDILE 264
Query: 294 ELRAKAK 300
E A+AK
Sbjct: 265 ETIAEAK 271
>gi|170699439|ref|ZP_02890483.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10]
gi|170135639|gb|EDT03923.1| Polyprenyl synthetase [Burkholderia ambifaria IOP40-10]
Length = 294
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 141/275 (51%), Gaps = 25/275 (9%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P Q++E+MRY+VL G KR P++C AA EL G A A ALEM+H SL+HDD+P
Sbjct: 29 PTQLHEAMRYAVLGGG-KRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMP 87
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GDAL F + V + ++R E+A
Sbjct: 88 CMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDVDALSPVQQAALVR---ELA 144
Query: 186 RAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAG--ADDDEI 238
A GS GMA GQ +DL +E + K G + +AV G LAG + +
Sbjct: 145 LASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLR-AAVRMGALAGDTPSAETL 203
Query: 239 QSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEV 291
+L Y AVG+ +QVVDDIL+ T K GK +YV+ G++ + E+
Sbjct: 204 AALDVYAAAVGLAFQVVDDILDV---TTDSATLGKTAGKDAANDKPTYVSILGLDASREL 260
Query: 292 AEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
A +LRA+A D K +G L D +R
Sbjct: 261 AAQLRAEAH---DALKPFGARAQRLAELADLVVNR 292
>gi|70732810|ref|YP_262577.1| geranyltranstransferase [Pseudomonas protegens Pf-5]
gi|68347109|gb|AAY94715.1| geranyltranstransferase [Pseudomonas protegens Pf-5]
Length = 295
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/291 (35%), Positives = 151/291 (51%), Gaps = 14/291 (4%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPE--QIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
+ Y + +D + T PE ++YE+MRYSV+ G KR P++ AACE G
Sbjct: 2 ITAYQASSQARVDAAMHTLFTAPSPELARLYEAMRYSVM-NGGKRVRPLLAYAACEALGG 60
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A ACA+E++HA SL+HDDLP MDDD RRGQP+ H + AILAGD L L
Sbjct: 61 KPEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLA 120
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG-----EPNLVEFVQEK 214
F ++ E R LR++ +A+A G GM GQ +DL + +E++
Sbjct: 121 FSALLDPALSDASAEIR-LRMVTTLAQAAGPAGMVGGQAIDLGSVGLKLDQQALEYMHRH 179
Query: 215 KFGEMSECSAVCGGFLAG-ADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP----RDE 269
K G + E S + G +G A+ E+++L+ Y +A+G+ +QV DDIL+ ++ T R
Sbjct: 180 KTGALIEASVILGALASGRAEKGELKALQTYAQAIGLAFQVQDDILDVESDTATLGKRQG 239
Query: 270 EKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+ +Y A G+ A E A ELR +A L F + + L +I
Sbjct: 240 ADIARDKPTYPALLGLAAAKEYALELRDQALHALRPFDAAAEPLRELARYI 290
>gi|172062807|ref|YP_001810458.1| polyprenyl synthetase [Burkholderia ambifaria MC40-6]
gi|171995324|gb|ACB66242.1| Polyprenyl synthetase [Burkholderia ambifaria MC40-6]
Length = 294
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/274 (37%), Positives = 140/274 (51%), Gaps = 23/274 (8%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P Q++E+MRY+VL G KR P++C AA EL G A A ALEM+H SL+HDD+P
Sbjct: 29 PTQLHEAMRYAVLGGG-KRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMP 87
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GDAL F + V + ++R E+A
Sbjct: 88 CMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDVDALSPVQQAALVR---ELA 144
Query: 186 RAVGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEMSEC----SAVCGGFLAG--ADDDEIQ 239
A GS GMA GQ +DL + Q +K M +AV G LAG + +
Sbjct: 145 LASGSIGMAGGQAIDLASVGLKLTREQLEKMHRMKTGALLRAAVRMGALAGDTPSAETLA 204
Query: 240 SLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVA 292
+L Y AVG+ +QVVDDIL+ T K GK +YV+ G++ + E+A
Sbjct: 205 ALDVYAAAVGLAFQVVDDILDV---TTDSATLGKTAGKDAANDKPTYVSILGLDASRELA 261
Query: 293 EELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
+LRA+A D K +G L D +R
Sbjct: 262 AQLRAEAH---DALKPFGARAQRLAELADLVVNR 292
>gi|225570636|ref|ZP_03779659.1| hypothetical protein CLOHYLEM_06736 [Clostridium hylemonae DSM
15053]
gi|225160554|gb|EEG73173.1| hypothetical protein CLOHYLEM_06736 [Clostridium hylemonae DSM
15053]
Length = 300
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 133/249 (53%), Gaps = 20/249 (8%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
Y I E+M YS+LA G KR P++ +LF A P A+EM+H SL+HDDL
Sbjct: 32 YQSIIMEAMSYSLLA-GGKRLRPMLMKETYDLFNGRSKALKPFMAAIEMIHTYSLVHDDL 90
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDAL----FPLGFQHIVSHTPPHLVPEPRVLRV 180
P MD+D RRG+ + H VYG D+ ILAGDAL F F+ V+ L+ R L V
Sbjct: 91 PAMDNDEYRRGRRTTHVVYGEDMGILAGDALLNYAFETAFKAFVTEPEDSLLI-GRALGV 149
Query: 181 IAEIARAVGSTGMAAGQFLDL-----EGEPNLVEFVQEKKFGEMSECSAVCGGFLAGADD 235
+ E A G GM GQ +D+ + +++ + E K + E + + G L GA +
Sbjct: 150 LGEKA---GIYGMIGGQVIDVRETGRDISKEVLDTIYELKTAALIESAMMIGAILGGASE 206
Query: 236 DEIQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYVAFYGVEKAME 290
+E++++ + VG+ +Q+ DDIL+ + + P ++K KK +YV G+E+A
Sbjct: 207 EEVKAVEQIAGNVGIAFQIQDDILDVVSSSEVLGKPVHSDEKNKK-TTYVTLLGIEEAAR 265
Query: 291 VAEELRAKA 299
EEL KA
Sbjct: 266 TVEELSQKA 274
>gi|254852589|ref|ZP_05241937.1| geranyltranstransferase [Listeria monocytogenes FSL R2-503]
gi|300765397|ref|ZP_07075379.1| geranyltranstransferase [Listeria monocytogenes FSL N1-017]
gi|404280917|ref|YP_006681815.1| geranyltranstransferase [Listeria monocytogenes SLCC2755]
gi|404286782|ref|YP_006693368.1| geranyltranstransferase [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|405755492|ref|YP_006678956.1| geranyltranstransferase [Listeria monocytogenes SLCC2540]
gi|258605902|gb|EEW18510.1| geranyltranstransferase [Listeria monocytogenes FSL R2-503]
gi|300513834|gb|EFK40899.1| geranyltranstransferase [Listeria monocytogenes FSL N1-017]
gi|404224692|emb|CBY76054.1| geranyltranstransferase [Listeria monocytogenes SLCC2540]
gi|404227552|emb|CBY48957.1| geranyltranstransferase [Listeria monocytogenes SLCC2755]
gi|404245711|emb|CBY03936.1| geranyltranstransferase [Listeria monocytogenes serotype 7 str.
SLCC2482]
Length = 293
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/241 (37%), Positives = 129/241 (53%), Gaps = 14/241 (5%)
Query: 41 DLKTYWTTLITEIDQNLEKAITVKYPE-QIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
DL + ID++L K I+ + E ++ ESM YSV A G KR P++ A + V
Sbjct: 3 DLTLFLEQYKKVIDESLFKEISERNIEPRLKESMLYSVQAGG-KRIRPMLVFATLQALKV 61
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
N + TA ALEM+H SLIHDDLP MD+D RRG+ +NH V+G AILAGDAL L
Sbjct: 62 NPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLA 121
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----VQEK 214
F + +L E R+ +I +I+ + G+ GM GQ D+E E V + +
Sbjct: 122 FSILAE--DENLSFETRI-ALINQISFSSGAEGMVGGQLADMEAENKQVTIEELSSIHAR 178
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKK 274
K GE+ + +A AD ++ + LR + +G+ +Q+ DDIL+ DE K K
Sbjct: 179 KTGELLIFAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIG----DETKMGK 234
Query: 275 K 275
K
Sbjct: 235 K 235
>gi|254253601|ref|ZP_04946918.1| Geranylgeranyl pyrophosphate synthase [Burkholderia dolosa AUO158]
gi|124898246|gb|EAY70089.1| Geranylgeranyl pyrophosphate synthase [Burkholderia dolosa AUO158]
Length = 294
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 141/275 (51%), Gaps = 25/275 (9%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P +++E+MRY+VL G KR P++C AA EL G A A ALEM+H SL+HDD+P
Sbjct: 29 PTRLHEAMRYAVLGGG-KRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMP 87
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GDAL F + V + ++R E+A
Sbjct: 88 CMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDADALSPVQQAALVR---ELA 144
Query: 186 RAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAGA--DDDEI 238
A GS GMA GQ +DL +E + K G + +AV G LAG D +
Sbjct: 145 LASGSLGMAGGQAIDLASVGIKLTREQLETMHRMKTGALLR-AAVRMGALAGETPSADTM 203
Query: 239 QSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEV 291
+L Y AVG+ +QVVDDIL+ T K GK +YV+ G++ + E+
Sbjct: 204 AALDVYAGAVGLAFQVVDDILDV---TTDSATLGKTAGKDAANDKPTYVSILGLDASREL 260
Query: 292 AEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
A +LRA+A D K +G L D +R
Sbjct: 261 AAQLRAEAH---DALKPFGARAQRLAELADLVVNR 292
>gi|107026831|ref|YP_624342.1| polyprenyl synthetase [Burkholderia cenocepacia AU 1054]
gi|116691975|ref|YP_837508.1| polyprenyl synthetase [Burkholderia cenocepacia HI2424]
gi|170736031|ref|YP_001777291.1| polyprenyl synthetase [Burkholderia cenocepacia MC0-3]
gi|105896205|gb|ABF79369.1| farnesyl-diphosphate synthase [Burkholderia cenocepacia AU 1054]
gi|116649975|gb|ABK10615.1| farnesyl-diphosphate synthase [Burkholderia cenocepacia HI2424]
gi|169818219|gb|ACA92801.1| Polyprenyl synthetase [Burkholderia cenocepacia MC0-3]
Length = 294
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 141/275 (51%), Gaps = 25/275 (9%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P +++E+MRY+VL G KR P++C AA EL G A A ALEM+H SL+HDD+P
Sbjct: 29 PAKLHEAMRYAVLGGG-KRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMP 87
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GDAL F + V + ++R E+A
Sbjct: 88 CMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDAEALSPVQQAALVR---ELA 144
Query: 186 RAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAGA--DDDEI 238
A GS GMA GQ +DL +E + K G + +AV G LAG + +
Sbjct: 145 LASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLR-AAVRMGALAGETPSAETM 203
Query: 239 QSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEV 291
+L Y AVG+ +QVVDDIL+ T K GK +YV+ G+E + E+
Sbjct: 204 AALDVYAGAVGLAFQVVDDILDV---TTDSATLGKTAGKDAANDKPTYVSILGLEASREL 260
Query: 292 AEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
A +LRA+A D K +G L D +R
Sbjct: 261 AAQLRAEAH---DALKPFGARAQRLAELADLVVNR 292
>gi|294793724|ref|ZP_06758861.1| geranyltranstransferase [Veillonella sp. 3_1_44]
gi|294455294|gb|EFG23666.1| geranyltranstransferase [Veillonella sp. 3_1_44]
Length = 292
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/271 (33%), Positives = 136/271 (50%), Gaps = 20/271 (7%)
Query: 67 EQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPC 126
EQ+YESM YS++ +G KR P++ A E+ CA+E +H SL+HDDLP
Sbjct: 29 EQLYESMNYSLM-QGGKRIRPILTKAVLEMLHKEPADYKEFLCAMECIHTYSLVHDDLPA 87
Query: 127 MDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIAR 186
MD+D RRG +NH VYG +AILAGD L FQ + S+T + + L I +A
Sbjct: 88 MDNDDYRRGNLTNHKVYGEGLAILAGDGLLTYAFQLMTSNT---VASAQQKLDAIQCVAT 144
Query: 187 AVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSL 241
A G GM GQ DL E + + + K G + S G L A++ L
Sbjct: 145 AAGPEGMVGGQAFDLLSEDKHIPLEELKVLHTGKTGALFNASVELGLILGCANNTTRTFL 204
Query: 242 RRYGRAVGVLYQVVDDIL------EAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEEL 295
Y +G+L+Q+ DDIL E +TP + ++ K +YV+ G+E+A A +
Sbjct: 205 MEYSNCLGLLFQITDDILDVTGTIEELGKTPGSDIRQHK--STYVSLLGLEQAKHQAYLV 262
Query: 296 RAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
++A + L+ Y +L + IDY +R
Sbjct: 263 GSQAHDALN-LVSYDTTILS--ALIDYLLER 290
>gi|171320202|ref|ZP_02909262.1| Polyprenyl synthetase [Burkholderia ambifaria MEX-5]
gi|171094554|gb|EDT39608.1| Polyprenyl synthetase [Burkholderia ambifaria MEX-5]
Length = 294
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 141/275 (51%), Gaps = 25/275 (9%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P Q++E+MRY+VL G KR P++C AA EL G A A ALEM+H SL+HDD+P
Sbjct: 29 PTQLHEAMRYAVLGGG-KRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMP 87
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GDAL F + V + ++R E+A
Sbjct: 88 CMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDGDALSPVQQAALVR---ELA 144
Query: 186 RAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAG--ADDDEI 238
A GS GMA GQ +DL +E + K G + +AV G LAG + +
Sbjct: 145 LASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLR-AAVRMGALAGDPPSAETL 203
Query: 239 QSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEV 291
+L Y AVG+ +QVVDDIL+ T K GK +YV+ G++ + E+
Sbjct: 204 AALDVYAGAVGLAFQVVDDILDV---TTDSATLGKTAGKDAANDKPTYVSILGLDASREL 260
Query: 292 AEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
A +LRA+A D K +G L D +R
Sbjct: 261 AAQLRAEAH---DALKPFGARAQRLAELADLVVNR 292
>gi|416999235|ref|ZP_11939904.1| geranyltranstransferase [Veillonella parvula ACS-068-V-Sch12]
gi|333977388|gb|EGL78247.1| geranyltranstransferase [Veillonella parvula ACS-068-V-Sch12]
Length = 292
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/271 (33%), Positives = 136/271 (50%), Gaps = 20/271 (7%)
Query: 67 EQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPC 126
EQ+YESM YS++ +G KR P++ A E+ CA+E +H SL+HDDLP
Sbjct: 29 EQLYESMNYSLM-QGGKRIRPILTKAVLEMLHKEPADYKEFLCAMECIHTYSLVHDDLPA 87
Query: 127 MDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIAR 186
MD+D RRG +NH VYG +AILAGD L FQ + S+T + + L I +A
Sbjct: 88 MDNDDYRRGNLTNHKVYGEGLAILAGDGLLTYAFQLMTSNT---VASAQQKLDAIQCVAT 144
Query: 187 AVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSL 241
A G GM GQ DL E + + + K G + S G L A++ L
Sbjct: 145 AAGPEGMVGGQAFDLLSEDKHIPLEELKVLHTGKTGALFNASVELGLILGSANNTTRTFL 204
Query: 242 RRYGRAVGVLYQVVDDIL------EAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEEL 295
Y +G+L+Q+ DDIL E +TP + ++ K +YV+ G+++A A +
Sbjct: 205 MEYSNCLGLLFQITDDILDVTGTIEELGKTPGSDIRQHK--STYVSLLGLDQAKHQAYLV 262
Query: 296 RAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
++A + L+ Y +L + IDY +R
Sbjct: 263 GSQAHDALN-LVSYDTTILS--ALIDYLLER 290
>gi|253995978|ref|YP_003048042.1| polyprenyl synthetase [Methylotenera mobilis JLW8]
gi|253982657|gb|ACT47515.1| Polyprenyl synthetase [Methylotenera mobilis JLW8]
Length = 303
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 142/264 (53%), Gaps = 14/264 (5%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P+ ++++MRYS+L G KR ++C AA EL N A ACA+EM+HA SL+HDD+P
Sbjct: 40 PQVLHDAMRYSLLGGG-KRVRALLCYAAAELCATNATIADAAACAVEMIHAYSLVHDDMP 98
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMD+D RRG+PS H Y A+L GDAL L F V TP + + ++ +A
Sbjct: 99 CMDNDDLRRGKPSCHKQYDDATALLVGDALQSLAFD--VLSTPTLCESANQQISMLNILA 156
Query: 186 RAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A GS GMA GQ +DL + +E + + K G + + +A+ G A +++ +
Sbjct: 157 KASGSLGMAGGQAIDLASVGKALSQHELENMHKLKTGALIQAAALLGASSGTA--EQMSA 214
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKS----YVAFYGVEKAMEVAEELR 296
+ Y +G+ +QVVDDIL+ +A T + K S YV G+++A ++A++L
Sbjct: 215 VIVYAEHIGLAFQVVDDILDVEADTSTLGKTAGKDADSNKPTYVTILGLDQAKKLADQLY 274
Query: 297 AKAKEELDRFKKYGDNVLPLYSFI 320
A L F + L FI
Sbjct: 275 ETAISALTPFGNDAKRLRELAGFI 298
>gi|372276416|ref|ZP_09512452.1| IspA [Pantoea sp. SL1_M5]
Length = 299
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 135/269 (50%), Gaps = 12/269 (4%)
Query: 69 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMD 128
+ +M Y L G KR P + A E+ + + A A+E +HA SLIHDDLP MD
Sbjct: 32 LVNAMHYGALLGG-KRLRPFLVYATGEMLHADPASLDAPAAAVECIHAYSLIHDDLPAMD 90
Query: 129 DDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAV 188
DD RRGQP+ H YG D AILAGDAL L F + P + E R++ +++E+A+A
Sbjct: 91 DDALRRGQPTCHIKYGEDTAILAGDALQTLAFSILADQAMPGVSAEYRLM-MLSELAKAS 149
Query: 189 GSTGMAAGQFLDLEGEPNLVEF-----VQEKKFGEMSECSAVCGGFLAG-ADDDEIQSLR 242
G GM GQ LDL E V+ + K G + + G AG A + + L
Sbjct: 150 GVAGMCGGQALDLAAEGKSVDLDQLEQIHRHKTGALIRSAVRLGALTAGDAGREALPLLD 209
Query: 243 RYGRAVGVLYQVVDDILEAKAQTP---RDEEKKKKKGKS-YVAFYGVEKAMEVAEELRAK 298
RY A+G+ +QV DDIL+ T + + + GKS Y + G+E A A +L +
Sbjct: 210 RYAEAIGLAFQVQDDILDVIGDTAVIGKRQGADQHLGKSTYPSLLGLENAQAKARDLYQE 269
Query: 299 AKEELDRFKKYGDNVLPLYSFIDYAADRE 327
A + L+ + N L + + +R+
Sbjct: 270 ALDTLEMLAAHSYNTTALQALASFIIERD 298
>gi|254248780|ref|ZP_04942100.1| Geranylgeranyl pyrophosphate synthase [Burkholderia cenocepacia
PC184]
gi|124875281|gb|EAY65271.1| Geranylgeranyl pyrophosphate synthase [Burkholderia cenocepacia
PC184]
Length = 294
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 141/275 (51%), Gaps = 25/275 (9%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P +++E+MRY+VL G KR P++C AA EL G A A ALEM+H SL+HDD+P
Sbjct: 29 PAKLHEAMRYAVLGGG-KRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMP 87
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GDAL F + V + ++R E+A
Sbjct: 88 CMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAFVALTDADALSPVQQAALVR---ELA 144
Query: 186 RAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAGA--DDDEI 238
A GS GMA GQ +DL +E + K G + +AV G LAG + +
Sbjct: 145 LASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLR-AAVRMGALAGETPSAETM 203
Query: 239 QSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEV 291
+L Y AVG+ +QVVDDIL+ T K GK +YV+ G+E + E+
Sbjct: 204 AALDVYAGAVGLAFQVVDDILDV---TTDSATLGKTAGKDAANDKPTYVSILGLEASREL 260
Query: 292 AEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
A +LRA+A D K +G L D +R
Sbjct: 261 AAQLRAEAH---DALKPFGARAQRLAELADLVVNR 292
>gi|238024940|ref|YP_002909172.1| polyprenyl synthetase [Burkholderia glumae BGR1]
gi|237879605|gb|ACR31937.1| Polyprenyl synthetase [Burkholderia glumae BGR1]
Length = 294
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 140/269 (52%), Gaps = 22/269 (8%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P ++E+MRY+V+ G KR P++C AA EL G + A+ + ALEM+H SL+HDD+P
Sbjct: 29 PGTLHEAMRYAVMGGG-KRVRPLLCHAAGELTGASEAASNAASAALEMIHVYSLVHDDMP 87
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GDAL F V+ T + + ++ E+A
Sbjct: 88 CMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAF---VALTDAAALSPQQQAALVRELA 144
Query: 186 RAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCGGFLAGA--DDDEI 238
A GS GMA GQ +DL + +E + K G + S V G LAG D +
Sbjct: 145 LASGSIGMAGGQAIDLASVGQMLTREQLETMHRMKTGALLRAS-VRMGALAGETPTADTM 203
Query: 239 QSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEV 291
++L Y AVG+ +QVVDDIL+ T K GK +YV+ G++ + E+
Sbjct: 204 RALDAYAAAVGLAFQVVDDILDV---TTDSATLGKTAGKDAAANKPTYVSIIGLDASREL 260
Query: 292 AEELRAKAKEELDRFKKYGDNVLPLYSFI 320
A +LRA A L F + L +
Sbjct: 261 AAQLRADAHAALQPFGARAQRLAELADLV 289
>gi|398824185|ref|ZP_10582526.1| geranylgeranyl pyrophosphate synthase [Bradyrhizobium sp. YR681]
gi|398225107|gb|EJN11388.1| geranylgeranyl pyrophosphate synthase [Bradyrhizobium sp. YR681]
Length = 307
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 149/312 (47%), Gaps = 23/312 (7%)
Query: 28 PVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPP 87
P A +L T D + L++ D L I P+++ ++MRYS L G KR P
Sbjct: 6 PSDFAKRLDKTADDTEALLGRLLS--DDILHDEIA--RPKRLMDAMRYSSL-NGGKRLRP 60
Query: 88 VMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDI 147
+ V + +FGV R AA ALE +H SLIHDDLP MD+ RRG+P+ H
Sbjct: 61 FLVVESAAVFGVPREAALLVGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKKTDDAT 120
Query: 148 AILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG---- 203
AILAGD L + F IV+ H R+L A +AR G GM GQ LDL G
Sbjct: 121 AILAGDGLLTIAFD-IVTRDEIHRDANVRLLLTRA-LARCAGIGGMVGGQILDLAGEGRF 178
Query: 204 ---EPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILE 260
EP V +Q+ K G + V G L A E Q+L YGRA+G +Q+ DD+L+
Sbjct: 179 GGNEPIDVARIQQMKTGALLRYGCVAGALLGEASKAEYQALDDYGRALGEAFQIADDLLD 238
Query: 261 AKAQT-----PRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLP 315
+ P + K ++V G+E A + +L A+A + F GD
Sbjct: 239 VEGDAAALGKPAGADAALGK-TTFVTQLGIEGAKQRVRDLLARADSAVSIF---GDRAAV 294
Query: 316 LYSFIDYAADRE 327
L + + A+R+
Sbjct: 295 LQAAARFVAERK 306
>gi|295700827|ref|YP_003608720.1| polyprenyl synthetase [Burkholderia sp. CCGE1002]
gi|295440040|gb|ADG19209.1| Polyprenyl synthetase [Burkholderia sp. CCGE1002]
Length = 293
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/290 (35%), Positives = 151/290 (52%), Gaps = 22/290 (7%)
Query: 46 WT-TLITEIDQNLEKAITVKY--PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRI 102
WT +++ ++ LE + + P +++E+MRY+VL G KR P++C AA EL G
Sbjct: 6 WTRSVLERVETALEHYLPAETTEPAKLHEAMRYAVLGGG-KRVRPLLCHAAGELTGARAE 64
Query: 103 AAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQH 162
A ALEM+H SL+HDD+PCMDDD RRG+P+ H Y A+L GDAL F
Sbjct: 65 RLDAAAAALEMIHVYSLVHDDMPCMDDDELRRGKPTVHVKYDEATALLVGDALQSQAFVV 124
Query: 163 IVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG------EPNLVEFVQEKKF 216
+ S ++ +P+ ++ E+A A GS GM GQ +DL P L E + K
Sbjct: 125 LTS----DVLGQPQQAALVRELALASGSVGMCGGQAIDLASVGHTLTRPRL-ETMHRMKT 179
Query: 217 GEMSECSAVCGGFLAGA--DDDEIQSLRRYGRAVGVLYQVVDDILEA---KAQTPRDEEK 271
G + +AV G LAG D + SL Y AVG+ +QVVDDIL+ A + K
Sbjct: 180 GALLR-AAVRMGALAGETPDAQALASLDAYAAAVGLAFQVVDDILDVTTDSATLGKTAGK 238
Query: 272 KKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
K GK +YV+ G++ + +A +LR+ A L F + L +
Sbjct: 239 DAKDGKPTYVSIIGLDASRALAAQLRSDAHAALAPFGARAQRLAELADLV 288
>gi|303326969|ref|ZP_07357411.1| geranylgeranyl diphosphate synthase [Desulfovibrio sp. 3_1_syn3]
gi|302862957|gb|EFL85889.1| geranylgeranyl diphosphate synthase [Desulfovibrio sp. 3_1_syn3]
Length = 297
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/236 (41%), Positives = 136/236 (57%), Gaps = 17/236 (7%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P ++ ESM YS+ A G KR PV+C++ L G+ A P A A+EM+H SLIHDDLP
Sbjct: 32 PPRLKESMLYSLQAGG-KRLRPVLCLSCAALCGLEPQKALPFAAAIEMIHTYSLIHDDLP 90
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
MDDD RRG+PSNH + AILAGD L F I+ P VP R+LR +AE+A
Sbjct: 91 AMDDDDLRRGKPSNHKAFDEATAILAGDGLLTDAFV-IMCRAP---VPPDRLLRAVAELA 146
Query: 186 RAVGSTGMAAGQFLDL----EGEPNLVEF--VQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
A G++GM GQ D+ + +L E + K G + S VCGG LAG DD ++
Sbjct: 147 LAAGASGMVGGQEWDMIYTGRSQVSLEELRGMHAMKTGALLRASCVCGGLLAGVDDKALR 206
Query: 240 SLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYVAFYGVEKAME 290
++ +G ++GV +Q+ DDIL+ A T P + ++ K +Y + G+EK+ E
Sbjct: 207 AISNFGSSLGVAFQIADDILDVVADTATLGKPAGSDAEQGK-NTYPSLVGLEKSRE 261
>gi|407710083|ref|YP_006793947.1| farnesyl diphosphate synthase [Burkholderia phenoliruptrix BR3459a]
gi|407238766|gb|AFT88964.1| farnesyl diphosphate synthase [Burkholderia phenoliruptrix BR3459a]
Length = 293
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/266 (37%), Positives = 141/266 (53%), Gaps = 17/266 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P +++E+MRY+VL G KR P++C AA EL G A ALEM+H SL+HDD+P
Sbjct: 29 PAKLHEAMRYAVLGGG-KRVRPLLCHAAGELTGARAECLDAAAAALEMIHVYSLVHDDMP 87
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GDAL F V+ T L P + ++ E+A
Sbjct: 88 CMDDDALRRGKPTVHVKYDEATALLVGDALQSQAF---VALTSDVLAPAQQA-ALVRELA 143
Query: 186 RAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCGGFLAGA--DDDEI 238
A GS GM GQ +DL + +E + K G + +AV G LAG D + +
Sbjct: 144 LASGSIGMCGGQAIDLASVGHTLTREQLETMHRMKTGALLR-AAVRMGALAGEAPDANAM 202
Query: 239 QSLRRYGRAVGVLYQVVDDILEA---KAQTPRDEEKKKKKGK-SYVAFYGVEKAMEVAEE 294
+SL Y AVG+ +QVVDDIL+ A + K K GK +YV+ G++ + +A +
Sbjct: 203 RSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGKDAKDGKPTYVSIIGLDASRALAAQ 262
Query: 295 LRAKAKEELDRFKKYGDNVLPLYSFI 320
LR+ A L F + L +
Sbjct: 263 LRSDAHAALAPFGARAQRLAELADLV 288
>gi|423457638|ref|ZP_17434435.1| hypothetical protein IEI_00778 [Bacillus cereus BAG5X2-1]
gi|401148022|gb|EJQ55515.1| hypothetical protein IEI_00778 [Bacillus cereus BAG5X2-1]
Length = 296
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/247 (36%), Positives = 142/247 (57%), Gaps = 17/247 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + E+M YS L G KR P++ A + FG + ACALEM+H SL+HDDLP
Sbjct: 30 PNVLREAMAYS-LEAGGKRLRPLLLFATLQAFGKEKNLGIGAACALEMIHTYSLVHDDLP 88
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH V+G +A+LAGD L FQ I+++ + E +V R++ E+A
Sbjct: 89 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKV-RLVLELA 147
Query: 186 RAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM GQ D+E E + +E++ + K G++ E + + G L+ A +++ +
Sbjct: 148 KAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEEK 207
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVAE 293
L + + +G+ +Q+ DDIL+ + +EE K G +Y + V++A ++ E
Sbjct: 208 LLAFAKYIGLAFQIRDDILDVEGT---EEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILE 264
Query: 294 ELRAKAK 300
E AKAK
Sbjct: 265 ETIAKAK 271
>gi|291520797|emb|CBK79090.1| Geranylgeranyl pyrophosphate synthase [Coprococcus catus GD/7]
Length = 303
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/253 (35%), Positives = 140/253 (55%), Gaps = 23/253 (9%)
Query: 56 NLEKAITVKYPEQ------IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIA-AFPTA 108
++EK + PE+ I+ +MRYS++A G KR P++ FG +A A P
Sbjct: 13 DIEKLLERMLPEEAGLQKTIFSAMRYSLMA-GGKRIRPLLIAETYRFFGGTDMALAEPFM 71
Query: 109 CALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTP 168
A+EM+H SLIHDDLP +D+D RRG+ ++H VYG +AILAGDAL F+ S
Sbjct: 72 AAIEMIHTYSLIHDDLPALDNDDYRRGRLTSHKVYGEAMAILAGDALLNYAFE-TASKAM 130
Query: 169 PHLVPEPRVLRVIAE---IARAVGSTGMAAGQFLDLE--GEP---NLVEFVQEKKFGEMS 220
H + +LRV+ ++ G GM GQ +D+E G+P + F+ E K G +
Sbjct: 131 DHARDDEELLRVMKAFRILSSKPGINGMIGGQVVDVELTGKPIPEKTLRFIFELKTGALI 190
Query: 221 ECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL-----EAKAQTPRDEEKKKKK 275
E + + G LAGA D++I ++ + +G+ +Q+ DD+L EA P ++K +K
Sbjct: 191 EAAMMIGAQLAGASDEQIAAVEKAAGDIGMAFQIQDDVLDVIGNEALLGKPVHSDEKNEK 250
Query: 276 GKSYVAFYGVEKA 288
++V YG+E+A
Sbjct: 251 -TTWVTVYGLEQA 262
>gi|289623775|ref|ZP_06456729.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str.
NCPPB 3681]
gi|289646544|ref|ZP_06477887.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str.
2250]
gi|422581075|ref|ZP_16656219.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330865926|gb|EGH00635.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 295
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/301 (37%), Positives = 155/301 (51%), Gaps = 25/301 (8%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPE--QIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
+ +Y T ++ LEK PE ++YE+MRYSV+ G KR P++ AACE G
Sbjct: 2 IASYQAQSQTRVNAALEKLFQAPSPELNRLYEAMRYSVM-NGGKRVRPLLAYAACEALGG 60
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A ACA+E++HA SL+HDDLP MDDD RRGQP+ H + AILAGD L L
Sbjct: 61 VAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLA 120
Query: 160 FQHIVSHTPPHLVP---EPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL------VEF 210
F +++ PHL E R L+++ +A A G GM GQ +DL G L +E+
Sbjct: 121 FTALLA---PHLTSRDAETR-LQMVNTLAAAAGPAGMVGGQAIDL-GSVGLKLDQAALEY 175
Query: 211 VQEKKFGEMSECSAVCGGFLAG-ADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP--- 266
+ K G + E S G +G AD + +L+ Y RAVG+ +QV DDIL+ ++ T
Sbjct: 176 MHRHKTGALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLG 235
Query: 267 -RDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAAD 325
R + +Y A G+E A A ELR +A L F + PL Y +
Sbjct: 236 KRQGADIARDKPTYPALLGLEAAKRYALELRDQALTALSPFDAAAE---PLRELARYIVE 292
Query: 326 R 326
R
Sbjct: 293 R 293
>gi|217964491|ref|YP_002350169.1| geranyltranstransferase [Listeria monocytogenes HCC23]
gi|386008135|ref|YP_005926413.1| geranyltranstransferase [Listeria monocytogenes L99]
gi|386026735|ref|YP_005947511.1| geranyltranstransferase [Listeria monocytogenes M7]
gi|217333761|gb|ACK39555.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Listeria monocytogenes HCC23]
gi|307570945|emb|CAR84124.1| geranyltranstransferase [Listeria monocytogenes L99]
gi|336023316|gb|AEH92453.1| geranyltranstransferase [Listeria monocytogenes M7]
Length = 293
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 125/229 (54%), Gaps = 14/229 (6%)
Query: 53 IDQNLEKAITVKYPE-QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACAL 111
ID++L K I+ + E + ESM YSV A G KR P++ A + VN + TA AL
Sbjct: 15 IDESLFKEISERKIEPTLKESMLYSVQAGG-KRIRPMLVFATLQALKVNPLLGVKTATAL 73
Query: 112 EMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHL 171
EM+H SLIHDDLP MD+D RRG+ +NH V+G AILAGDAL L F + +L
Sbjct: 74 EMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLAFSILAE--DENL 131
Query: 172 VPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----VQEKKFGEMSECSAVC 226
E R+ +I +I+ + G+ GM GQ D+E E V + +K GE+ +
Sbjct: 132 SFETRI-ALINQISFSSGAEGMVGGQLADMEAENKQVTLEELSSIHARKTGELLIFAVTS 190
Query: 227 GGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKK 275
+A AD ++ + LR + +G+ +Q+ DDIL+ DE K KK
Sbjct: 191 AAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIG----DETKMGKK 235
>gi|384214679|ref|YP_005605843.1| geranyltranstransferase [Bradyrhizobium japonicum USDA 6]
gi|354953576|dbj|BAL06255.1| geranyltranstransferase [Bradyrhizobium japonicum USDA 6]
Length = 307
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/277 (35%), Positives = 137/277 (49%), Gaps = 19/277 (6%)
Query: 63 VKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHD 122
+ P+++ ++MRYS L G KR P + V + +FG+ R AA ALE +H SLIHD
Sbjct: 37 IARPKRLMDAMRYSSL-NGGKRLRPFLVVESAAVFGIPREAALLVGAALECIHCYSLIHD 95
Query: 123 DLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIA 182
DLP MD+ RRG+P+ H AILAGD L L F IV+ H R+L A
Sbjct: 96 DLPAMDNSDLRRGRPTLHKKTDDATAILAGDGLLTLAFD-IVTRDEIHRDANVRLLLTRA 154
Query: 183 EIARAVGSTGMAAGQFLDLEG-------EPNLVEFVQEKKFGEMSECSAVCGGFLAGADD 235
+AR G GM GQ LDL G EP V +Q+ K G + + G L A
Sbjct: 155 -LARCAGIGGMVGGQILDLAGEGRFGGNEPIDVARIQQMKTGALLRYGCIAGALLGQASQ 213
Query: 236 DEIQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYVAFYGVEKAME 290
E Q+L YGRA+G +Q+ DD+L+ + P + K ++V G+E A +
Sbjct: 214 KEYQALDDYGRALGEAFQIADDLLDVEGDAAALGKPAGADAALGK-TTFVTQLGIEGAKQ 272
Query: 291 VAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+L A+A + F GD L + + A+R+
Sbjct: 273 RVRDLLARADGAVSIF---GDRAAVLQAAARFVAERK 306
>gi|399889141|ref|ZP_10775018.1| geranyltranstransferase [Clostridium arbusti SL206]
Length = 289
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 139/287 (48%), Gaps = 17/287 (5%)
Query: 48 TLITEIDQNLEKAITVK--YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAF 105
L EID L+ K Y ++IYE+M+YSV G KR P++ E++ N
Sbjct: 5 NLKNEIDIWLKNYFDNKGTYNKKIYEAMKYSV-DIGGKRVRPILHCITYEMYDKNYNRVM 63
Query: 106 PTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVS 165
P A A+EM+H SLIHDDLPCMD+D RRG P+NH V+G +A+LAGD L +
Sbjct: 64 PIAGAIEMIHTYSLIHDDLPCMDNDDLRRGHPTNHKVFGDALAVLAGDGLLNEAMNIMFD 123
Query: 166 HTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMS 220
E ++I+ A G+ GM GQ +D+ E + ++ KK G +
Sbjct: 124 FCTDKGKDELSACKIISNSA---GAEGMIGGQVVDILSEGKKISYETLSYMHRKKTGALI 180
Query: 221 ECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL-----EAKAQTPRDEEKKKKK 275
S + G + GA D+++ L +G +G+ +Q+ DD+L E+ P + K
Sbjct: 181 RASILSGAIIVGASDNDLDKLSSFGSKLGLAFQIKDDVLDIDGNESVMGKPVKSDIDNDK 240
Query: 276 GKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDY 322
++V +G+E +EL + L K N+ + ++ Y
Sbjct: 241 -TTFVTTFGLEDCRNKCKELTKECLGILSDLSKDTSNLEEITKYLLY 286
>gi|345888510|ref|ZP_08839592.1| hypothetical protein HMPREF0178_02366 [Bilophila sp. 4_1_30]
gi|345040637|gb|EGW44875.1| hypothetical protein HMPREF0178_02366 [Bilophila sp. 4_1_30]
Length = 302
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/250 (41%), Positives = 147/250 (58%), Gaps = 15/250 (6%)
Query: 68 QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCM 127
++ E+M YS+LA G KR PV+C++ LFG++ A P A +LEM+H SLIHDDLP M
Sbjct: 37 RLKEAMYYSLLAGG-KRLRPVLCLSTAALFGLSAEAVMPFAASLEMIHTYSLIHDDLPAM 95
Query: 128 DDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARA 187
DDD RRG+PS H + AILAGDAL F + S +P RVL +A ++ A
Sbjct: 96 DDDDLRRGRPSCHKAFDEATAILAGDALLTDAFGFMASTVKD--LPAGRVLEALASVSSA 153
Query: 188 VGSTGMAAGQFLDLE--GEPNL----VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSL 241
GS GM GQ LD++ G+ ++ ++ + K G M + V GG LAGA + +I SL
Sbjct: 154 AGSAGMVGGQILDMDCTGKTDVPLETLQTLHALKTGAMFRVACVSGGLLAGASEPDIASL 213
Query: 242 RRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYVAFYGVEKAMEVAEELR 296
R YG A+GV +Q+VDDIL+ A T P + + K +Y + G++++ E+A+E
Sbjct: 214 RAYGEALGVTFQIVDDILDETADTATLGKPAGSDAEMGK-TTYPSLMGLDRSRELAQEFA 272
Query: 297 AKAKEELDRF 306
KA + L F
Sbjct: 273 EKAVDSLSAF 282
>gi|329121102|ref|ZP_08249733.1| geranyltranstransferase [Dialister micraerophilus DSM 19965]
gi|327471264|gb|EGF16718.1| geranyltranstransferase [Dialister micraerophilus DSM 19965]
Length = 284
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 142/262 (54%), Gaps = 21/262 (8%)
Query: 53 IDQNLEKAITVKYPEQ--IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACA 110
I+++L + + PE +++SM YS+L+ G KR + + E+F V+ + A +
Sbjct: 13 INKHLAGLLKTQRPEHKILFDSMNYSLLSNG-KRIRGCLFLFILEMFKVDYLQYLDIAAS 71
Query: 111 LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPH 170
+E VH SLIHDDLPCMD+D RRG +NH YG +A+ AGDAL FQ I +
Sbjct: 72 VECVHTYSLIHDDLPCMDNDDYRRGILTNHKKYGEGVALQAGDALLTFAFQLI---SQAK 128
Query: 171 LVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEK-----KFGEMSEC--- 222
E R ++I ++ A G+ GM AGQ D++ E +E + K K G M +
Sbjct: 129 FSAEDRC-KLIEILSIAAGAEGMVAGQVHDIQIENKSIELDELKLLDKFKTGRMIKTPVD 187
Query: 223 SAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVAF 282
A+ ++ +D D+ LR++ + +G+L+Q+ DDIL+ K + E K +YV+
Sbjct: 188 MAIQLTHMSISDADQ---LRKFAKHLGLLFQITDDILDYKED---NNEIKNTHKNTYVSL 241
Query: 283 YGVEKAMEVAEELRAKAKEELD 304
G+EKA AEE KA E L+
Sbjct: 242 LGLEKAKLSAEETAYKAIEALE 263
>gi|402569609|ref|YP_006618953.1| polyprenyl synthetase [Burkholderia cepacia GG4]
gi|402250806|gb|AFQ51259.1| Polyprenyl synthetase [Burkholderia cepacia GG4]
Length = 294
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 142/275 (51%), Gaps = 25/275 (9%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P Q++E+MRY+VL G KR P++C AA EL G A A ALEM+H SL+HDD+P
Sbjct: 29 PTQLHEAMRYAVLGGG-KRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMP 87
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GDAL F V+ T + + ++ E+A
Sbjct: 88 CMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAF---VALTDADALAPAQQAALVRELA 144
Query: 186 RAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAGA--DDDEI 238
A GS GMA GQ +DL +E + K G + +AV G LAG + +
Sbjct: 145 LASGSIGMAGGQAIDLASVGLKLTREQLETMHRMKTGALLR-AAVRMGALAGETPSAETM 203
Query: 239 QSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEV 291
+L Y AVG+ +QVVDDIL+ T K GK +YV+ G++ + E+
Sbjct: 204 SALDVYAGAVGLAFQVVDDILDV---TTDSATLGKTAGKDAANDKPTYVSILGLDASREL 260
Query: 292 AEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
A +LRA+A D K +G L D +R
Sbjct: 261 AAQLRAEAH---DALKPFGARAQRLAELADLVVNR 292
>gi|226311927|ref|YP_002771821.1| geranyltranstransferase [Brevibacillus brevis NBRC 100599]
gi|226094875|dbj|BAH43317.1| geranyltranstransferase [Brevibacillus brevis NBRC 100599]
Length = 300
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/233 (41%), Positives = 138/233 (59%), Gaps = 14/233 (6%)
Query: 43 KTYWTTLITEIDQNLEKAITVK-YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG--V 99
++Y I+Q L A+ + PE +YESM+YS++A G KR P++ +A E +
Sbjct: 8 ESYLVEKTAYIEQRLLPALEQQGVPENLYESMKYSLMAGG-KRLRPMLVLAVLEALDKPI 66
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
R AF A ALEM+H SLIHDDLP MDDD RRG+P+NH V+G AILAGDAL
Sbjct: 67 ERGVAF--AVALEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDALLTRA 124
Query: 160 FQHIV-SHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP---NL--VEFVQE 213
F +I ++ V + +IAE+ + G+TGM GQ D+EGE NL +EF+
Sbjct: 125 FAYIAEAYMDRTDVSAATTVNLIAELGKRAGATGMVGGQMADIEGESKRLNLDQLEFIHR 184
Query: 214 KKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL--EAKAQ 264
K G++ + GG+LA A + ++++L RYG +G+ +Q+ DDIL E AQ
Sbjct: 185 HKTGDLLIAALRGGGYLAEASEGQMEALTRYGVCIGLAFQIQDDILNVEGDAQ 237
>gi|75763306|ref|ZP_00743052.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl
pyrophosphate synthetase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|206971164|ref|ZP_03232115.1| geranyltranstransferase [Bacillus cereus AH1134]
gi|218899342|ref|YP_002447753.1| geranyltranstransferase [Bacillus cereus G9842]
gi|228902696|ref|ZP_04066843.1| Geranyltranstransferase [Bacillus thuringiensis IBL 4222]
gi|228941339|ref|ZP_04103891.1| Geranyltranstransferase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228954464|ref|ZP_04116489.1| Geranyltranstransferase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228967219|ref|ZP_04128255.1| Geranyltranstransferase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228974271|ref|ZP_04134840.1| Geranyltranstransferase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228980864|ref|ZP_04141168.1| Geranyltranstransferase [Bacillus thuringiensis Bt407]
gi|229071685|ref|ZP_04204901.1| Geranyltranstransferase [Bacillus cereus F65185]
gi|229081437|ref|ZP_04213937.1| Geranyltranstransferase [Bacillus cereus Rock4-2]
gi|229180458|ref|ZP_04307800.1| Geranyltranstransferase [Bacillus cereus 172560W]
gi|365159033|ref|ZP_09355220.1| hypothetical protein HMPREF1014_00683 [Bacillus sp. 7_6_55CFAA_CT2]
gi|384188250|ref|YP_005574146.1| dimethylallyltransferase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|402564407|ref|YP_006607131.1| dimethylallyltransferase [Bacillus thuringiensis HD-771]
gi|410676567|ref|YP_006928938.1| farnesyl diphosphate synthase IspA [Bacillus thuringiensis Bt407]
gi|423358781|ref|ZP_17336284.1| hypothetical protein IC1_00761 [Bacillus cereus VD022]
gi|423385682|ref|ZP_17362938.1| hypothetical protein ICE_03428 [Bacillus cereus BAG1X1-2]
gi|423412017|ref|ZP_17389137.1| hypothetical protein IE1_01321 [Bacillus cereus BAG3O-2]
gi|423426314|ref|ZP_17403345.1| hypothetical protein IE5_04003 [Bacillus cereus BAG3X2-2]
gi|423432198|ref|ZP_17409202.1| hypothetical protein IE7_04014 [Bacillus cereus BAG4O-1]
gi|423437632|ref|ZP_17414613.1| hypothetical protein IE9_03813 [Bacillus cereus BAG4X12-1]
gi|423503133|ref|ZP_17479725.1| hypothetical protein IG1_00699 [Bacillus cereus HD73]
gi|423527962|ref|ZP_17504407.1| hypothetical protein IGE_01514 [Bacillus cereus HuB1-1]
gi|423561345|ref|ZP_17537621.1| hypothetical protein II5_00749 [Bacillus cereus MSX-A1]
gi|434377303|ref|YP_006611947.1| dimethylallyltransferase [Bacillus thuringiensis HD-789]
gi|449091138|ref|YP_007423579.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl
pyrophosphate synthetase [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|452200639|ref|YP_007480720.1| (2E,6E)-farnesyl diphosphate synthase [Bacillus thuringiensis
serovar thuringiensis str. IS5056]
gi|74489206|gb|EAO52676.1| Dimethylallyltransferase / Geranyltranstransferase /
Geranylgeranyl pyrophosphate synthetase [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|206733936|gb|EDZ51107.1| geranyltranstransferase [Bacillus cereus AH1134]
gi|218540759|gb|ACK93153.1| geranyltranstransferase [Bacillus cereus G9842]
gi|228602882|gb|EEK60361.1| Geranyltranstransferase [Bacillus cereus 172560W]
gi|228701852|gb|EEL54338.1| Geranyltranstransferase [Bacillus cereus Rock4-2]
gi|228711416|gb|EEL63375.1| Geranyltranstransferase [Bacillus cereus F65185]
gi|228778800|gb|EEM27063.1| Geranyltranstransferase [Bacillus thuringiensis Bt407]
gi|228785321|gb|EEM33331.1| Geranyltranstransferase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228792588|gb|EEM40154.1| Geranyltranstransferase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228805121|gb|EEM51715.1| Geranyltranstransferase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228818265|gb|EEM64338.1| Geranyltranstransferase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228856883|gb|EEN01396.1| Geranyltranstransferase [Bacillus thuringiensis IBL 4222]
gi|326941959|gb|AEA17855.1| dimethylallyltransferase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|363626022|gb|EHL77031.1| hypothetical protein HMPREF1014_00683 [Bacillus sp. 7_6_55CFAA_CT2]
gi|401084653|gb|EJP92899.1| hypothetical protein IC1_00761 [Bacillus cereus VD022]
gi|401104085|gb|EJQ12062.1| hypothetical protein IE1_01321 [Bacillus cereus BAG3O-2]
gi|401111061|gb|EJQ18960.1| hypothetical protein IE5_04003 [Bacillus cereus BAG3X2-2]
gi|401116954|gb|EJQ24792.1| hypothetical protein IE7_04014 [Bacillus cereus BAG4O-1]
gi|401120787|gb|EJQ28583.1| hypothetical protein IE9_03813 [Bacillus cereus BAG4X12-1]
gi|401201602|gb|EJR08467.1| hypothetical protein II5_00749 [Bacillus cereus MSX-A1]
gi|401635738|gb|EJS53493.1| hypothetical protein ICE_03428 [Bacillus cereus BAG1X1-2]
gi|401793059|gb|AFQ19098.1| dimethylallyltransferase [Bacillus thuringiensis HD-771]
gi|401875860|gb|AFQ28027.1| dimethylallyltransferase [Bacillus thuringiensis HD-789]
gi|402451625|gb|EJV83444.1| hypothetical protein IGE_01514 [Bacillus cereus HuB1-1]
gi|402459354|gb|EJV91091.1| hypothetical protein IG1_00699 [Bacillus cereus HD73]
gi|409175696|gb|AFV20001.1| farnesyl diphosphate synthase IspA [Bacillus thuringiensis Bt407]
gi|449024895|gb|AGE80058.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl
pyrophosphate synthetase [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|452106032|gb|AGG02972.1| (2E,6E)-farnesyl diphosphate synthase [Bacillus thuringiensis
serovar thuringiensis str. IS5056]
Length = 296
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/247 (36%), Positives = 142/247 (57%), Gaps = 17/247 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + E+M YS L G KR P++ A + FG R ACALEM+H SL+HDDLP
Sbjct: 30 PNVLREAMAYS-LEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLP 88
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH V+G +A+LAGD L FQ I+++ + E +V R++ E+A
Sbjct: 89 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKV-RLVLELA 147
Query: 186 RAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM GQ D+E E + +E++ + K G++ E + + G L+ A +++ +
Sbjct: 148 KAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEK 207
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVAE 293
L + + +G+ +Q+ DDIL+ + +EE K G +Y + V++A ++ E
Sbjct: 208 LLTFAKYIGLAFQIRDDILDVEGT---EEEIGKPIGSDLSNEKSTYTTLFTVDRAKDILE 264
Query: 294 ELRAKAK 300
E A+AK
Sbjct: 265 ETIAEAK 271
>gi|425737349|ref|ZP_18855622.1| geranyltranstransferase [Staphylococcus massiliensis S46]
gi|425482697|gb|EKU49853.1| geranyltranstransferase [Staphylococcus massiliensis S46]
Length = 294
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 135/247 (54%), Gaps = 17/247 (6%)
Query: 50 ITEIDQNLEKAI-TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIA-AFPT 107
I +I+ +E++I T + + ESMRYS+ A G KR P++ + ++ N + + T
Sbjct: 10 IDDINNVIEQSIETSELNTNLEESMRYSLQAGG-KRIRPLLMLLTIDMIDPNAVQNGYQT 68
Query: 108 ACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHT 167
A ALEM+H SLIHDDLP MD+D RRG+ +NH VYG AILAGDAL F+ I
Sbjct: 69 AIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWKAILAGDALLTKAFEIITK-- 126
Query: 168 PPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSEC 222
L P +V ++I ++A A G GM GQ +D+E E + E + K G + +
Sbjct: 127 DEKLEPTIQV-QLIKDLAIASGHMGMIGGQTIDMESEDKTISLSQLETIHRYKTGALLKY 185
Query: 223 SAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL-----EAKAQTPRDEEKKKKKGK 277
+ + G +A D + +L +G A+G+++Q+ DD+L EA+ P + K
Sbjct: 186 AVLAGAHIAKVDGKYLNALDTFGDALGMIFQIKDDLLDIYGDEAEIGKPTGSDVANNK-N 244
Query: 278 SYVAFYG 284
+YV+ G
Sbjct: 245 TYVSLLG 251
>gi|431925836|ref|YP_007238870.1| geranylgeranyl pyrophosphate synthase [Pseudomonas stutzeri RCH2]
gi|431824123|gb|AGA85240.1| geranylgeranyl pyrophosphate synthase [Pseudomonas stutzeri RCH2]
Length = 296
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/290 (35%), Positives = 152/290 (52%), Gaps = 18/290 (6%)
Query: 45 YWTTLITEIDQNLEKAITVKYP--EQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRI 102
Y + +D LE P E++Y++MRYSV+ G KR P++ AACE ++
Sbjct: 6 YQKSCQQRVDGCLETLFVAPLPQLERLYQAMRYSVM-NGGKRVRPLLVYAACEALNGDKA 64
Query: 103 AAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQH 162
+A ACA+E++HA SL+HDDLP MDDD RRGQP+ H + AILAGD L L F+
Sbjct: 65 SADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEA 124
Query: 163 IV--SHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKK 215
+ +H P LR+ A +ARA G GM GQ +DL + + +E + K
Sbjct: 125 MAQAAHNPQDATLR---LRMFAVLARAAGPAGMVGGQAIDLGSVGLKLDRDALELMHRHK 181
Query: 216 FGEMSECSAVCGGFLAG-ADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKK-- 272
G + E S G +G AD D + SL +Y RA+G+ +QV DDIL+ ++ T + +
Sbjct: 182 TGALIEASVQLGALASGRADADNLASLSQYARAIGLAFQVQDDILDVESDTATLGKHQGA 241
Query: 273 --KKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+ +Y A G++ A A ELR +A L F + + L +I
Sbjct: 242 DIARDKPTYPALLGMDAAKAYALELRDQALHALRPFDIAAEPLRELARYI 291
>gi|422409581|ref|ZP_16486542.1| geranyltranstransferase [Listeria monocytogenes FSL F2-208]
gi|313608930|gb|EFR84685.1| geranyltranstransferase [Listeria monocytogenes FSL F2-208]
Length = 293
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 125/229 (54%), Gaps = 14/229 (6%)
Query: 53 IDQNLEKAITVKYPE-QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACAL 111
ID++L K I+ + E + ESM YSV A G KR P++ A + VN + TA AL
Sbjct: 15 IDESLFKEISERKIEPTLKESMLYSVQAGG-KRIRPMLVFATLQALKVNPLLGVKTATAL 73
Query: 112 EMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHL 171
EM+H SLIHDDLP MD+D RRG+ +NH V+G AILAGDAL L F + +L
Sbjct: 74 EMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLAFSILAE--DENL 131
Query: 172 VPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----VQEKKFGEMSECSAVC 226
E R+ +I +I+ + G+ GM GQ D+E E V + +K GE+ +
Sbjct: 132 SFETRI-ALINQISFSSGAEGMVGGQLADMEAESKQVTLEELSSIHARKTGELLIFAITS 190
Query: 227 GGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKK 275
+A AD ++ + LR + +G+ +Q+ DDIL+ DE K KK
Sbjct: 191 AAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIG----DETKMGKK 235
>gi|225024517|ref|ZP_03713709.1| hypothetical protein EIKCOROL_01392 [Eikenella corrodens ATCC
23834]
gi|224942668|gb|EEG23877.1| hypothetical protein EIKCOROL_01392 [Eikenella corrodens ATCC
23834]
Length = 295
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 146/269 (54%), Gaps = 22/269 (8%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P++++++MRY+VL G KR P++ +AA EL AA A+E+VH SL+HDD+P
Sbjct: 30 PQRLHQAMRYAVLG-GGKRLRPLLVLAAAELGQSEAAAAEAALAAVELVHVYSLVHDDMP 88
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
MD+D RRG+P+ H Y A+L GDAL L F + + P+ +P PR L+++ +A
Sbjct: 89 AMDNDSLRRGKPTCHVQYDEATALLVGDALQTLAFDVL---SRPNGLPAPRQLQMVHTLA 145
Query: 186 RAVGSTGMAAGQFLDLE------GEPNLVEFVQEKKFGEMSECSAVCGGFLA-GADDDEI 238
RA GS GMA GQ +DL+ G+ L E + K G + + G DD +
Sbjct: 146 RASGSLGMAGGQAIDLQSVGQRIGQAEL-ETMHRLKTGALIRAAVALGALSCPDLDDAAL 204
Query: 239 QSLRRYGRAVGVLYQVVDDILEAKAQTP-------RDEEKKKKKGKSYVAFYGVEKAMEV 291
L Y +G+ +QV+DD+L+ +A T +D+E K +YV G+ A +
Sbjct: 205 ARLDDYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDQEADK---PTYVKLMGLNAARDY 261
Query: 292 AEELRAKAKEELDRFKKYGDNVLPLYSFI 320
AE L A+A++ L F D + L +F+
Sbjct: 262 AERLVAEAQQALSGFDARADRLRQLAAFV 290
>gi|394988076|ref|ZP_10380914.1| hypothetical protein SCD_00477 [Sulfuricella denitrificans skB26]
gi|393792534|dbj|GAB70553.1| hypothetical protein SCD_00477 [Sulfuricella denitrificans skB26]
Length = 296
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 148/281 (52%), Gaps = 32/281 (11%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P++++++MRY VL G KR P++ AA E+ G A A+E++HA SL+HDDLP
Sbjct: 30 PQRLHQAMRYVVLGGG-KRIRPLLAFAAGEVVGAGPQCVDAAAAAVELIHAYSLVHDDLP 88
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRV-LRVIAEI 184
CMDDD RRG+P+ H Y A+L GD+L L FQ +++ P L P V L ++ +
Sbjct: 89 CMDDDSLRRGKPTCHHEYDEATALLVGDSLQTLAFQ-VLADRP--LADAPAVQLEMMKIL 145
Query: 185 ARAVGSTGMAAGQFLDLEGE------PNLVEFVQEKKFGEMSECS----AVCGGFLAGAD 234
A A GS GMA GQ +D E P L EF+ K G + S A+CG G +
Sbjct: 146 AVAAGSRGMAGGQAIDGESVGKTLSLPEL-EFMHIHKTGALIRASVQLGALCG---KGLE 201
Query: 235 DDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP-------RDEEKKKKKGKSYVAFYGVEK 287
+ E++ L Y + +G+ +QVVDD+L+A++ T +D E K +YV+ G
Sbjct: 202 NSEMEHLLHYAKCIGLAFQVVDDVLDAESNTATLGKTAGKDAEANK---PTYVSILGANA 258
Query: 288 AMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
A A +L A + L+ F G L D+ R+F
Sbjct: 259 ARAFAADLHRDALQSLEVF---GARAERLRQIADFIVKRQF 296
>gi|331000960|ref|ZP_08324597.1| polyprenyl synthetase [Parasutterella excrementihominis YIT 11859]
gi|329569919|gb|EGG51676.1| polyprenyl synthetase [Parasutterella excrementihominis YIT 11859]
Length = 300
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/274 (35%), Positives = 146/274 (53%), Gaps = 28/274 (10%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P++++ +MRYSV+ G KR P++ A +++ + TA A+E VH+ SLIHDDLP
Sbjct: 31 PQKLHSAMRYSVIG-GGKRVRPLLVYAVGQIYDADPENLDLTALAVECVHSYSLIHDDLP 89
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMD+D R G+P+ H +G +A+LAGDAL P F +V P E R+ +++ +A
Sbjct: 90 CMDNDILRHGKPTTHAAFGEAVAMLAGDALQPEAFLFLVRTKLP---AEQRI-KLVELLA 145
Query: 186 RAVGSTGMAAGQFLDLEGEPNLVEFVQE------KKFGEMSECSAVCGGFLAGA---DDD 236
A + GM GQ +DL N ++E K G + + S + G F AG
Sbjct: 146 YASSTRGMCGGQAIDLSVVGNQKMTIEELRLMHSMKTGALLKASVLLGAF-AGKKTPSQH 204
Query: 237 EIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAM 289
++ L YG A+G+ +Q+VDDIL+ T E K GK +YV+ G+EKA
Sbjct: 205 DLSQLEVYGNAIGLAFQIVDDILDVVGDTA---ELGKTAGKDALGDKPTYVSLLGLEKAK 261
Query: 290 EVAEE---LRAKAKEELDRFKKYGDNVLPLYSFI 320
E+AEE + AKA E L + ++ + FI
Sbjct: 262 ELAEEQYLIAAKAVEGLSEDLDGKERLIEIADFI 295
>gi|398996325|ref|ZP_10699184.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM21]
gi|398127099|gb|EJM16514.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM21]
Length = 295
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/302 (36%), Positives = 155/302 (51%), Gaps = 27/302 (8%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPE--QIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
+ Y T ++ LE PE ++YE+MRYSV+ G KR P++ AACE G
Sbjct: 2 IAAYSATSQARVNAALETLFNAPGPELARLYEAMRYSVM-NGGKRVRPLLAYAACEALGG 60
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A ACA+E++HA SL+HDDLP MDDD RRGQP+ H + AILAGD L L
Sbjct: 61 KAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLA 120
Query: 160 FQHIVSHTPPHLVPEPRVLRV--IAEIARAVGSTGMAAGQFLDLEG-----EPNLVEFVQ 212
F ++ P L P +R+ ++ +A A G GM GQ +DL + +E++
Sbjct: 121 FSALLD---PRLNPADAEIRLQMVSALAVAAGPAGMVGGQAIDLGSVGLKLDQTALEYMH 177
Query: 213 EKKFGEMSECSAVCGGFLAG-ADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 271
K G + E S G +G A+ DE+ +L+ Y +AVG+ +QV DDIL+ ++ T E
Sbjct: 178 RHKTGALIEVSVKLGALASGRAEKDELNALQSYAQAVGLAFQVQDDILDVESDT---ETL 234
Query: 272 KKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAA 324
K++G +Y A G++ A A ELR +A L F + PL Y
Sbjct: 235 GKRQGADIARDKPTYPALLGLDAAKAYALELRDQALRALRPFDATAE---PLRDLARYIV 291
Query: 325 DR 326
DR
Sbjct: 292 DR 293
>gi|392553125|ref|ZP_10300262.1| geranyltranstransferase [Pseudoalteromonas spongiae UST010723-006]
Length = 296
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 141/266 (53%), Gaps = 15/266 (5%)
Query: 53 IDQNLEKAITVKY--PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACA 110
I++NL I + E++ + RYS+L G KR P++ ELF + ACA
Sbjct: 15 IEENLSALIPASHHTDEKLVAACRYSLL-NGGKRLRPILVYLTGELFNADNADLDRIACA 73
Query: 111 LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPH 170
+E +H+ SL+HDDLP MDDD RRG+P+ H Y AIL GDAL L F+ I + + +
Sbjct: 74 IECIHSYSLVHDDLPAMDDDELRRGRPTCHIAYDEATAILVGDALQCLAFETI-TESQFN 132
Query: 171 LVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEMSEC----SAVC 226
L+++ +A A G GM GQ LD+ +++ Q ++ ++ SA+
Sbjct: 133 CTTVNNQLKIVNTLANASGLLGMCGGQALDIAATDSVITLTQLEQVHKLKTGALLKSAIK 192
Query: 227 GGFLAG-ADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYV 280
G LAG A++ EI +L RY A+G+ +QV DDIL+ + T P+ + + K +Y
Sbjct: 193 MGALAGNANELEIAALARYAEAIGLAFQVQDDILDVEGDTHTLGKPQGSDIEANKA-TYP 251
Query: 281 AFYGVEKAMEVAEELRAKAKEELDRF 306
A G+E A E A+ L +A + L
Sbjct: 252 ALLGIEGAKEKAQNLVNQAIDALSEI 277
>gi|386043674|ref|YP_005962479.1| geranyltranstransferase [Listeria monocytogenes 10403S]
gi|404410661|ref|YP_006696249.1| geranyltranstransferase [Listeria monocytogenes SLCC5850]
gi|404413439|ref|YP_006699026.1| geranyltranstransferase [Listeria monocytogenes SLCC7179]
gi|345536908|gb|AEO06348.1| geranyltranstransferase [Listeria monocytogenes 10403S]
gi|404230487|emb|CBY51891.1| geranyltranstransferase [Listeria monocytogenes SLCC5850]
gi|404239138|emb|CBY60539.1| geranyltranstransferase [Listeria monocytogenes SLCC7179]
Length = 293
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 125/229 (54%), Gaps = 14/229 (6%)
Query: 53 IDQNLEKAITVKYPE-QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACAL 111
ID++L K I + E ++ ESM YS+ A G KR P++ A + VN + TA AL
Sbjct: 15 IDESLFKEINERNIEPRLKESMLYSIQAGG-KRIRPMLVFATLQALKVNPLLGVKTATAL 73
Query: 112 EMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHL 171
EM+H SLIHDDLP MD+D RRG+ +NH V+G AILAGDAL L F + +L
Sbjct: 74 EMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVFGDATAILAGDALLTLAFSILAE--DDNL 131
Query: 172 VPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----VQEKKFGEMSECSAVC 226
E R+ +I +I+ + G+ GM GQ D+E E V + +K GE+ +
Sbjct: 132 SFETRI-ALINQISFSSGAEGMVGGQLADMEAENKHVTLEELSSIHARKTGELLIYAVTS 190
Query: 227 GGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKK 275
+A AD ++ + LR + +G+ +Q+ DDIL+ DE K KK
Sbjct: 191 AAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIG----DETKMGKK 235
>gi|425056596|ref|ZP_18460047.1| geranyltranstransferase [Enterococcus faecium 505]
gi|403031626|gb|EJY43226.1| geranyltranstransferase [Enterococcus faecium 505]
Length = 296
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 132/250 (52%), Gaps = 19/250 (7%)
Query: 71 ESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDD 130
++M YSV A G + P ++ A + + A ALEMVH SLIHDDLP MD+D
Sbjct: 33 DAMTYSVKAGGKRIRPLLLLTAVASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPAMDND 92
Query: 131 PSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGS 190
RRG+P+NH V+G +AILAGD L FQ I + HL P++L ++ ++A GS
Sbjct: 93 DLRRGKPTNHKVFGEALAILAGDGLLTGAFQLI---SMAHLGNSPKLL-LLQQLAVCAGS 148
Query: 191 TGMAAGQFLDLEGEPNLVE-----FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYG 245
GM AGQ D+EGE + F+ E+K G + + + GG LA ++ + L+R
Sbjct: 149 QGMVAGQAADIEGESKKLSLEELAFIHERKTGRLIRYALLAGGILAKQPEEILLLLQRLA 208
Query: 246 RAVGVLYQVVDDILEAKAQTP-------RDEEKKKKKGKSYVAFYGVEKAMEVAEELRAK 298
+G+ +Q+ DD+L+ T +DE +K +Y G+EK E E
Sbjct: 209 EHLGLAFQIRDDLLDVIGTTKTLGKTAGKDERMEK---NTYPRLLGLEKTREALEIELLS 265
Query: 299 AKEELDRFKK 308
A + +D+ ++
Sbjct: 266 ANKIIDKLEE 275
>gi|218235767|ref|YP_002368981.1| geranyltranstransferase [Bacillus cereus B4264]
gi|229129458|ref|ZP_04258429.1| Geranyltranstransferase [Bacillus cereus BDRD-Cer4]
gi|229146753|ref|ZP_04275118.1| Geranyltranstransferase [Bacillus cereus BDRD-ST24]
gi|229152380|ref|ZP_04280572.1| Geranyltranstransferase [Bacillus cereus m1550]
gi|296504667|ref|YP_003666367.1| dimethylallyltransferase [Bacillus thuringiensis BMB171]
gi|423640739|ref|ZP_17616357.1| hypothetical protein IK9_00684 [Bacillus cereus VD166]
gi|423650045|ref|ZP_17625615.1| hypothetical protein IKA_03832 [Bacillus cereus VD169]
gi|423657123|ref|ZP_17632422.1| hypothetical protein IKG_04111 [Bacillus cereus VD200]
gi|218163724|gb|ACK63716.1| geranyltranstransferase [Bacillus cereus B4264]
gi|228630988|gb|EEK87625.1| Geranyltranstransferase [Bacillus cereus m1550]
gi|228636581|gb|EEK93046.1| Geranyltranstransferase [Bacillus cereus BDRD-ST24]
gi|228654063|gb|EEL09930.1| Geranyltranstransferase [Bacillus cereus BDRD-Cer4]
gi|296325719|gb|ADH08647.1| dimethylallyltransferase [Bacillus thuringiensis BMB171]
gi|401279800|gb|EJR85722.1| hypothetical protein IK9_00684 [Bacillus cereus VD166]
gi|401282463|gb|EJR88362.1| hypothetical protein IKA_03832 [Bacillus cereus VD169]
gi|401289866|gb|EJR95570.1| hypothetical protein IKG_04111 [Bacillus cereus VD200]
Length = 296
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/247 (36%), Positives = 142/247 (57%), Gaps = 17/247 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + E+M YS L G KR P++ A + FG R ACALEM+H SL+HDDLP
Sbjct: 30 PNVLREAMAYS-LEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLP 88
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH V+G +A+LAGD L FQ I+++ + E +V R++ E+A
Sbjct: 89 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKV-RLVLELA 147
Query: 186 RAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM GQ D+E E + +E++ + K G++ E + + G L+ A +++ +
Sbjct: 148 KAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEK 207
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVAE 293
L + + +G+ +Q+ DDIL+ + +EE K G +Y + V++A ++ E
Sbjct: 208 LLTFAKYIGLAFQIRDDILDVEGT---EEEIGKPIGSDLSNEKSTYTTLFTVDRAKDILE 264
Query: 294 ELRAKAK 300
E A+AK
Sbjct: 265 ETIAEAK 271
>gi|229192390|ref|ZP_04319353.1| Geranyltranstransferase [Bacillus cereus ATCC 10876]
gi|228590967|gb|EEK48823.1| Geranyltranstransferase [Bacillus cereus ATCC 10876]
Length = 296
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/247 (36%), Positives = 142/247 (57%), Gaps = 17/247 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + E+M YS L G KR P++ A + FG R ACALEM+H SL+HDDLP
Sbjct: 30 PSVLREAMAYS-LEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLP 88
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH V+G +A+LAGD L FQ I+++ + E +V R++ E+A
Sbjct: 89 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKV-RLVLELA 147
Query: 186 RAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM GQ D+E E + +E++ + K G++ E + + G L+ A +++ +
Sbjct: 148 KAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEK 207
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVAE 293
L + + +G+ +Q+ DDIL+ + +EE K G +Y + V++A ++ E
Sbjct: 208 LLTFAKYIGLAFQIRDDILDVEGT---EEEIGKPIGSDLFNEKSTYTTLFTVDRAKDILE 264
Query: 294 ELRAKAK 300
E A+AK
Sbjct: 265 ETIAEAK 271
>gi|237797521|ref|ZP_04585982.1| geranyltranstransferase [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331020371|gb|EGI00428.1| geranyltranstransferase [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 295
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/301 (36%), Positives = 155/301 (51%), Gaps = 25/301 (8%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPE--QIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
+ +Y T ++ LE PE ++Y++MRYSV+ G KR P++ AACE G
Sbjct: 2 IASYQALSQTRVNAALESLFQAPGPELARLYDAMRYSVM-NGGKRVRPLLAYAACEALGG 60
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A ACA+E++HA SL+HDDLP MDDD RRGQP+ H + AILAGD L L
Sbjct: 61 EARDADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLA 120
Query: 160 FQHIVSHTPPHLVP---EPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL------VEF 210
F +++ PHL E R L++++ +A A G GM GQ +DL G L +E+
Sbjct: 121 FTALLA---PHLTSRDAETR-LQMVSTLAAAAGPAGMVGGQAIDL-GSVGLKLDQAALEY 175
Query: 211 VQEKKFGEMSECSAVCGGFLAG-ADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP--- 266
+ K G + E S G +G AD + SL+ Y RAVG+ +QV DDIL+ ++ T
Sbjct: 176 MHRHKTGALIEASVRLGALASGQADQPRLDSLQVYARAVGLAFQVQDDILDVESDTATLG 235
Query: 267 -RDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAAD 325
R + +Y A G++ A A ELR A LD +G PL Y +
Sbjct: 236 KRQGADIARDKPTYPALLGLDAAKSYALELRDMA---LDALNPFGPAAEPLRDLARYIVE 292
Query: 326 R 326
R
Sbjct: 293 R 293
>gi|404407800|ref|YP_006690515.1| geranyltranstransferase [Listeria monocytogenes SLCC2376]
gi|404241949|emb|CBY63349.1| geranyltranstransferase [Listeria monocytogenes SLCC2376]
Length = 293
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 125/229 (54%), Gaps = 14/229 (6%)
Query: 53 IDQNLEKAITVKYPE-QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACAL 111
ID++L K I+ + E + ESM YSV A G KR P++ A + VN + TA AL
Sbjct: 15 IDESLFKEISERKIEPALKESMLYSVQAGG-KRIRPMLVFATLQALKVNPLLGVKTATAL 73
Query: 112 EMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHL 171
EM+H SLIHDDLP MD+D RRG+ +NH V+G AILAGDAL L F + +L
Sbjct: 74 EMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLAFSILAE--DENL 131
Query: 172 VPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----VQEKKFGEMSECSAVC 226
E R+ +I +I+ + G+ GM GQ D+E E V + +K GE+ +
Sbjct: 132 SFETRI-ALINQISFSSGAEGMVGGQLADMEAENKQVTLEELSSIHARKTGELLIFAVTS 190
Query: 227 GGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKK 275
+A AD ++ + LR + +G+ +Q+ DDIL+ DE K KK
Sbjct: 191 AAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIG----DETKMGKK 235
>gi|293571745|ref|ZP_06682764.1| geranyltranstransferase [Enterococcus faecium E980]
gi|431066268|ref|ZP_19493891.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1604]
gi|431099312|ref|ZP_19496478.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1613]
gi|431738301|ref|ZP_19527246.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1972]
gi|291608202|gb|EFF37505.1| geranyltranstransferase [Enterococcus faecium E980]
gi|430568307|gb|ELB07355.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1604]
gi|430570813|gb|ELB09752.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1613]
gi|430597739|gb|ELB35522.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1972]
Length = 296
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 136/251 (54%), Gaps = 21/251 (8%)
Query: 71 ESMRYSVLAKGTKRAPPVMCVAACELFGV-NRIAAFPTACALEMVHAASLIHDDLPCMDD 129
++M YSV A G KR P++ +AA F + + A ALEMVH SLIHDDLP MD+
Sbjct: 33 DAMTYSVKA-GGKRIRPLLLLAAVASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPAMDN 91
Query: 130 DPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVG 189
D RRG+P+NH V+G +AILAGD L FQ I + HL P++L ++ ++A G
Sbjct: 92 DDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLI---SMAHLGHSPKLL-LLQQLAVCAG 147
Query: 190 STGMAAGQFLDLEGEPNLVE-----FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRY 244
+ GM AGQ D+EGE + F+ E+K G + + + GG LA ++ + L+R
Sbjct: 148 AQGMVAGQAADIEGESKKLSLEELAFIHERKTGRLIRYALLAGGILAKQPEEILLLLQRL 207
Query: 245 GRAVGVLYQVVDDILEAKAQTP-------RDEEKKKKKGKSYVAFYGVEKAMEVAEELRA 297
+G+ +Q+ DD+L+ T +DE +K +Y G+EK E E
Sbjct: 208 AEHLGLAFQIRDDLLDVIGTTKTLGKTAGKDERMEK---NTYPRLLGLEKTHEALEIELL 264
Query: 298 KAKEELDRFKK 308
A + +D+ ++
Sbjct: 265 SANKIIDKLEE 275
>gi|71737604|ref|YP_272900.1| geranyltranstransferase [Pseudomonas syringae pv. phaseolicola
1448A]
gi|71558157|gb|AAZ37368.1| geranyltranstransferase [Pseudomonas syringae pv. phaseolicola
1448A]
Length = 295
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/301 (36%), Positives = 155/301 (51%), Gaps = 25/301 (8%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPE--QIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
+ +Y T ++ LEK PE ++YE+MRYSV+ G KR P++ AACE G
Sbjct: 2 IASYQAQSQTRVNAALEKLFQAPSPELNRLYEAMRYSVM-NGGKRVRPLLAYAACEALGG 60
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A +CA+E++HA SL+HDDLP MDDD RRGQP+ H + AILAGD L L
Sbjct: 61 VAEDANGASCAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLA 120
Query: 160 FQHIVSHTPPHLVP---EPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL------VEF 210
F +++ PHL E R L+++ +A A G GM GQ +DL G L +E+
Sbjct: 121 FTALLA---PHLTSRDAETR-LQMVNTLAAAAGPAGMVGGQAIDL-GSVGLKLDQAALEY 175
Query: 211 VQEKKFGEMSECSAVCGGFLAG-ADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP--- 266
+ K G + E S G +G AD + +L+ Y RAVG+ +QV DDIL+ ++ T
Sbjct: 176 MHRHKTGALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLG 235
Query: 267 -RDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAAD 325
R + +Y A G+E A A ELR +A L F + PL Y +
Sbjct: 236 KRQGADIARDKPTYPALLGLEAAKRYALELRDQALTALSTFDAAAE---PLRELARYIVE 292
Query: 326 R 326
R
Sbjct: 293 R 293
>gi|149925097|ref|ZP_01913408.1| geranylgeranyl pyrophosphate synthase [Plesiocystis pacifica SIR-1]
gi|149814025|gb|EDM73658.1| geranylgeranyl pyrophosphate synthase [Plesiocystis pacifica SIR-1]
Length = 294
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 123/238 (51%), Gaps = 17/238 (7%)
Query: 37 STQFDLKTYWTTLITEIDQNLEKAITV--------KYPEQIYESMRYSVLAKGTKRAPPV 88
S FDL +Y ++ L+ + + P ++ E+MRY+VL +G KR PV
Sbjct: 2 SDAFDLPSYLDECRAAVNAALDAVLAMPEAGQPGADDPGRLREAMRYAVL-QGGKRMRPV 60
Query: 89 MCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIA 148
+ +AAC+ G + A P ACALEM+HA SL+HDDLP MD+D RRG+P+ H +G A
Sbjct: 61 LTIAACQAAGGDTAHALPAACALEMIHAYSLVHDDLPAMDNDLERRGKPTVHVEFGHANA 120
Query: 149 ILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL- 207
IL GDAL F+ + T VP + + +AR G GM GQ LDL ++
Sbjct: 121 ILVGDALLTDAFEVLARGTEG--VPRANIADAVTILARCAGINGMVGGQALDLIAGQDIA 178
Query: 208 ----VEFVQEKKFGEMSECSAVCGGFLA-GADDDEIQSLRRYGRAVGVLYQVVDDILE 260
+E V K G + + GG + A + L RYG A G+ +Q DD+L+
Sbjct: 179 DLETLERVHALKTGGLYAAAGALGGLSSPTAAPEAATQLERYGLAFGIAFQHADDVLD 236
>gi|422402853|ref|ZP_16479913.1| geranyltranstransferase, partial [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330872288|gb|EGH06437.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 294
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/301 (37%), Positives = 155/301 (51%), Gaps = 25/301 (8%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPE--QIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
+ +Y T ++ LEK PE ++YE+MRYSV+ G KR P++ AACE G
Sbjct: 2 IASYQAQSQTRVNAALEKLFQAPSPELNRLYEAMRYSVM-NGGKRVRPLLAYAACEALGG 60
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A ACA+E++HA SL+HDDLP MDDD RRGQP+ H + AILAGD L L
Sbjct: 61 VAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLA 120
Query: 160 FQHIVSHTPPHLVP---EPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL------VEF 210
F +++ PHL E R L+++ +A A G GM GQ +DL G L +E+
Sbjct: 121 FTALLA---PHLTSRDAETR-LQMVNTLAAAAGPAGMVGGQAIDL-GSVGLKLDQAALEY 175
Query: 211 VQEKKFGEMSECSAVCGGFLAG-ADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP--- 266
+ K G + E S G +G AD + +L+ Y RAVG+ +QV DDIL+ ++ T
Sbjct: 176 MHRHKTGALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLG 235
Query: 267 -RDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAAD 325
R + +Y A G+E A A ELR +A L F + PL Y +
Sbjct: 236 KRQGADIARDKPTYPALLGLEPAKRYALELRDQALTALSPFDAAAE---PLRELARYIVE 292
Query: 326 R 326
R
Sbjct: 293 R 293
>gi|227550446|ref|ZP_03980495.1| Geranyltranstransferase [Enterococcus faecium TX1330]
gi|257888474|ref|ZP_05668127.1| polyprenyl synthetase [Enterococcus faecium 1,141,733]
gi|257897151|ref|ZP_05676804.1| polyprenyl synthetase [Enterococcus faecium Com12]
gi|293377376|ref|ZP_06623580.1| geranyltranstransferase [Enterococcus faecium PC4.1]
gi|431751267|ref|ZP_19539958.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2620]
gi|431763868|ref|ZP_19552416.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E3548]
gi|227180347|gb|EEI61319.1| Geranyltranstransferase [Enterococcus faecium TX1330]
gi|257824528|gb|EEV51460.1| polyprenyl synthetase [Enterococcus faecium 1,141,733]
gi|257833716|gb|EEV60137.1| polyprenyl synthetase [Enterococcus faecium Com12]
gi|292644068|gb|EFF62174.1| geranyltranstransferase [Enterococcus faecium PC4.1]
gi|430615707|gb|ELB52650.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2620]
gi|430621692|gb|ELB58444.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E3548]
Length = 296
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 132/250 (52%), Gaps = 19/250 (7%)
Query: 71 ESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDD 130
++M YSV A G + P ++ A + + A ALEMVH SLIHDDLP MD+D
Sbjct: 33 DAMTYSVKAGGKRIRPLLLLTAVASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPAMDND 92
Query: 131 PSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGS 190
RRG+P+NH V+G +AILAGD L FQ I + HL P++L ++ ++A GS
Sbjct: 93 DLRRGKPTNHKVFGEALAILAGDGLLTGAFQLI---SMAHLGHSPKLL-LLQQLAVCAGS 148
Query: 191 TGMAAGQFLDLEGEPNLVE-----FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYG 245
GM AGQ D+EGE + F+ E+K G + + + GG LA ++ + L+R
Sbjct: 149 QGMVAGQAADIEGESKKLSLEELAFIHERKTGRLIRYALLAGGILAKQPEEILLLLQRLA 208
Query: 246 RAVGVLYQVVDDILEAKAQTP-------RDEEKKKKKGKSYVAFYGVEKAMEVAEELRAK 298
+G+ +Q+ DD+L+ T +DE +K +Y G+EK E E
Sbjct: 209 EHLGLAFQIRDDLLDVIGTTKTLGKTAGKDERMEK---NTYPRLLGLEKTREALEIELLS 265
Query: 299 AKEELDRFKK 308
A + +D+ ++
Sbjct: 266 ANKIIDKLEE 275
>gi|317492932|ref|ZP_07951356.1| polyprenyl synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316919054|gb|EFV40389.1| polyprenyl synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 301
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 142/272 (52%), Gaps = 15/272 (5%)
Query: 68 QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCM 127
Q+ +MRY L G KR P + A E+FG++ A A+E +HA SL+HDDLP M
Sbjct: 32 QLVAAMRYGALLGG-KRLRPYLVYATGEMFGLSLDNLDAPAAAVECIHAYSLMHDDLPAM 90
Query: 128 DDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARA 187
DDD RRGQP++H +G AILAGDAL L F + P + R L +++E+A+A
Sbjct: 91 DDDNLRRGQPTSHIKFGEAHAILAGDALQTLAFSILADSPMPDVAVSDR-LAMLSELAQA 149
Query: 188 VGSTGMAAGQFLDLEGEPNLVEF-----VQEKKFGEMSECSAVCGGFLAG-ADDDEIQSL 241
G GM GQ LDLE E V+ + K G + C+ G AG + L
Sbjct: 150 SGVAGMCGGQALDLEAEGKYVDLQSLERIHNHKTGALIRCAIRMGALAAGDTGRAALPLL 209
Query: 242 RRYGRAVGVLYQVVDDILEA-----KAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEELR 296
RY A+G+ +QV DDIL+ K P+ +++ +K +Y A G+++A A +L
Sbjct: 210 DRYAAAIGLAFQVQDDILDVIGDSEKTGKPQGSDQELEK-STYPALLGLKQAQNKALDLY 268
Query: 297 AKAKEELDRFKKYGD-NVLPLYSFIDYAADRE 327
A + L+ +++ + L L S + +R+
Sbjct: 269 QDAIQVLEELEQHHSIDTLALKSLASFIIERD 300
>gi|391229152|ref|ZP_10265358.1| geranylgeranyl pyrophosphate synthase [Opitutaceae bacterium TAV1]
gi|391218813|gb|EIP97233.1| geranylgeranyl pyrophosphate synthase [Opitutaceae bacterium TAV1]
Length = 326
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/277 (34%), Positives = 137/277 (49%), Gaps = 51/277 (18%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIA--AFPTACA------------- 110
P +++E+MRY++ A G KR PV+ +AA ELF R A PT A
Sbjct: 32 PARLHEAMRYTLQAGG-KRLRPVLVIAAAELFQTIRTTRPAAPTPPAVNPGSAMALPPLP 90
Query: 111 --------------LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
+E VH SLIHDDLPCMD+D RRG+P+ H + A+LAGDAL
Sbjct: 91 PSPPPLSPLPAAAAIECVHTYSLIHDDLPCMDNDDLRRGRPTAHRAFDEATALLAGDALL 150
Query: 157 PLGFQHIVS--HTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL------V 208
F + + + P LV ++ +A A G + AGQ DL E N +
Sbjct: 151 THAFALLANAYGSDPRLVTA-----LVRTLAAAAGPDQLIAGQMADLLAEKNAGATAADL 205
Query: 209 EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA----- 263
EF+ K M S V GG + GA D ++ +L R GR +G+ +Q+VDD+L+A A
Sbjct: 206 EFIHLNKTAAMIRASLVMGGLVGGAGDSDLATLDRAGRQLGLAFQIVDDVLDATADLATL 265
Query: 264 -QTPRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKA 299
+TP + K +YV +G++ A +A +L +A
Sbjct: 266 GKTPGKDAAAGK--MTYVKLHGIDTARRLARDLTGEA 300
>gi|290893528|ref|ZP_06556511.1| LOW QUALITY PROTEIN: geranyltranstransferase [Listeria
monocytogenes FSL J2-071]
gi|290556873|gb|EFD90404.1| LOW QUALITY PROTEIN: geranyltranstransferase [Listeria
monocytogenes FSL J2-071]
Length = 285
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 125/229 (54%), Gaps = 14/229 (6%)
Query: 53 IDQNLEKAITVKYPE-QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACAL 111
ID++L K I+ + E + ESM YSV A G KR P++ A + VN + TA AL
Sbjct: 7 IDESLFKEISERKIEPALKESMLYSVQAGG-KRIRPMLVFATLQALKVNPLLGVKTATAL 65
Query: 112 EMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHL 171
EM+H SLIHDDLP MD+D RRG+ +NH V+G AILAGDAL L F + +L
Sbjct: 66 EMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLAFSILAE--DENL 123
Query: 172 VPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----VQEKKFGEMSECSAVC 226
E R+ +I +I+ + G+ GM GQ D+E E V + +K GE+ +
Sbjct: 124 SFETRI-ALINQISFSSGAEGMVGGQLADMEAENKQVTLEELSSIHARKTGELLIFAVTS 182
Query: 227 GGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKK 275
+A AD ++ + LR + +G+ +Q+ DDIL+ DE K KK
Sbjct: 183 AAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIG----DETKMGKK 227
>gi|77461227|ref|YP_350734.1| farnesyl-diphosphate synthase [Pseudomonas fluorescens Pf0-1]
gi|77385230|gb|ABA76743.1| geranyltranstransferase [Pseudomonas fluorescens Pf0-1]
Length = 295
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 154/300 (51%), Gaps = 23/300 (7%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPE--QIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
+ Y T ++ LE PE ++YE+MRYSV+ G KR P++ AACE G
Sbjct: 2 IAAYSATSQARVNAALETLFNAPLPELARLYEAMRYSVM-NGGKRVRPLLAYAACEALGG 60
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A ACA+E++HA SL+HDDLP MDDD RRGQP+ H + AILAGD L L
Sbjct: 61 KAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLA 120
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG-----EPNLVEFVQEK 214
F ++ L + R+ +V A +A A G GM GQ +DL + +E +
Sbjct: 121 FSALLDPRLSDLSADIRLQQVTA-LAHAAGPAGMVGGQAIDLGSVGLKLDQKALEQMHRH 179
Query: 215 KFGEMSECSAVCGGFLAG-ADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K G + E S G +G A+ DE++SL+ Y +A+G+ +QV DDIL+ ++ T E K
Sbjct: 180 KTGALIEVSVKLGALASGCAEKDELKSLQTYAQAIGLAFQVQDDILDVESDT---ETLGK 236
Query: 274 KKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
++G +Y A G++ A A ELR +A L F + PL Y DR
Sbjct: 237 RQGADIARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAAAE---PLRDLARYIVDR 293
>gi|430840707|ref|ZP_19458630.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1007]
gi|431741902|ref|ZP_19530802.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2039]
gi|430494913|gb|ELA71131.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1007]
gi|430601055|gb|ELB38677.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2039]
Length = 296
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 136/251 (54%), Gaps = 21/251 (8%)
Query: 71 ESMRYSVLAKGTKRAPPVMCVAACELFGV-NRIAAFPTACALEMVHAASLIHDDLPCMDD 129
++M YSV A G KR P++ +AA F + + A ALEMVH SLIHDDLP MD+
Sbjct: 33 DAMTYSVKA-GGKRIRPLLLLAAVASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPAMDN 91
Query: 130 DPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVG 189
D RRG+P+NH V+G +AILAGD L FQ I + HL P++L ++ ++A G
Sbjct: 92 DDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLI---SMAHLGHSPKLL-LLQQLAVCAG 147
Query: 190 STGMAAGQFLDLEGEPNLVE-----FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRY 244
+ GM AGQ D+EGE + F+ E+K G + + + GG LA ++ + L+R
Sbjct: 148 AQGMVAGQAADIEGESKKLSLEELAFIHERKTGRLIRYALLAGGILAKQPEEILLLLQRL 207
Query: 245 GRAVGVLYQVVDDILEAKAQTP-------RDEEKKKKKGKSYVAFYGVEKAMEVAEELRA 297
+G+ +Q+ DD+L+ T +DE +K +Y G+EK E E
Sbjct: 208 AEHLGLAFQIRDDLLDVIGTTKTLGKTAGKDERMEK---NTYPRLLGLEKTHEALEIELL 264
Query: 298 KAKEELDRFKK 308
A + +D+ ++
Sbjct: 265 SANKIIDKLEE 275
>gi|329118147|ref|ZP_08246859.1| geranyltranstransferase [Neisseria bacilliformis ATCC BAA-1200]
gi|327465807|gb|EGF12080.1| geranyltranstransferase [Neisseria bacilliformis ATCC BAA-1200]
Length = 297
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/265 (36%), Positives = 144/265 (54%), Gaps = 14/265 (5%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P++++ +MRY+VL G KR P++ +AA EL + A A+E++HA SL+HDD+P
Sbjct: 32 PQELHRAMRYAVLGGG-KRLRPLLVLAASELGQADPDATAHAMAAVELIHAYSLVHDDMP 90
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
MD+D RRG+P+ H YG A+LAGDAL L F I T P +P R L++ A +A
Sbjct: 91 AMDNDSLRRGKPTCHIAYGEAAALLAGDALQTLAFDII---TRPAALPAERRLQMAATLA 147
Query: 186 RAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLA-GADDDEIQ 239
RA GS GMA GQ +DL + +E + K G + + GG DD +
Sbjct: 148 RASGSLGMAGGQAIDLANVGKTLTQSELEHMHRLKTGALIRAAVRLGGLACPDLDDTALH 207
Query: 240 SLRRYGRAVGVLYQVVDDILEAKAQTP---RDEEKKKKKGK-SYVAFYGVEKAMEVAEEL 295
SL Y A+G+ +QV+DD+L+ A T + K + K +YV+ G + A + AE L
Sbjct: 208 SLDSYAAALGLAFQVIDDVLDCAADTATLGKTAGKDAQNNKPTYVSLMGEKAAAQYAETL 267
Query: 296 RAKAKEELDRFKKYGDNVLPLYSFI 320
A+A L F +N+ L F+
Sbjct: 268 TAQALAALVPFGSRAENLRALARFV 292
>gi|228922933|ref|ZP_04086227.1| Geranyltranstransferase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|423582390|ref|ZP_17558501.1| hypothetical protein IIA_03905 [Bacillus cereus VD014]
gi|423634993|ref|ZP_17610646.1| hypothetical protein IK7_01402 [Bacillus cereus VD156]
gi|228836704|gb|EEM82051.1| Geranyltranstransferase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|401213269|gb|EJR20010.1| hypothetical protein IIA_03905 [Bacillus cereus VD014]
gi|401278979|gb|EJR84909.1| hypothetical protein IK7_01402 [Bacillus cereus VD156]
Length = 296
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/247 (36%), Positives = 142/247 (57%), Gaps = 17/247 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + E+M YS L G KR P++ A + FG R ACALEM+H SL+HDDLP
Sbjct: 30 PNVLREAMAYS-LEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLP 88
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH V+G +A+LAGD L FQ I+++ + E +V R++ E+A
Sbjct: 89 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKV-RLVLELA 147
Query: 186 RAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM GQ D+E E + +E++ + K G++ E + + G L+ A +++ +
Sbjct: 148 KAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEK 207
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVAE 293
L + + +G+ +Q+ DDIL+ + +EE K G +Y + +++A ++ E
Sbjct: 208 LLTFAKYIGLAFQIRDDILDVEGT---EEEIGKPIGSDLSNEKSTYTTLFTIDRAKDILE 264
Query: 294 ELRAKAK 300
E A+AK
Sbjct: 265 ETIAEAK 271
>gi|30022260|ref|NP_833891.1| dimethylallyltransferase [Bacillus cereus ATCC 14579]
gi|29897817|gb|AAP11092.1| Dimethylallyltransferase [Bacillus cereus ATCC 14579]
Length = 296
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/247 (36%), Positives = 142/247 (57%), Gaps = 17/247 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + E+M YS L G KR P++ A + FG R ACALEM+H SL+HDDLP
Sbjct: 30 PNVLREAMAYS-LEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLP 88
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH V+G +A+LAGD L FQ I+++ + E +V R++ E+A
Sbjct: 89 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKV-RLVLELA 147
Query: 186 RAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM GQ D+E E + +E++ + K G++ E + + G L+ A +++ +
Sbjct: 148 KAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKAGKLLEFAVLAGAILSDATEEQEEK 207
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVAE 293
L + + +G+ +Q+ DDIL+ + +EE K G +Y + V++A ++ E
Sbjct: 208 LLTFAKYIGLAFQIRDDILDVEGT---EEEIGKPIGSDLSNEKSTYTTLFTVDRAKDILE 264
Query: 294 ELRAKAK 300
E A+AK
Sbjct: 265 ETIAEAK 271
>gi|91777309|ref|YP_552517.1| farnesyl-diphosphate synthase [Burkholderia xenovorans LB400]
gi|91689969|gb|ABE33167.1| farnesyl-diphosphate synthase [Burkholderia xenovorans LB400]
Length = 293
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/265 (37%), Positives = 137/265 (51%), Gaps = 15/265 (5%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P ++E+MRY+VL G KR P++C AA EL G A ALEM+H SL+HDD+P
Sbjct: 29 PATLHEAMRYAVLGGG-KRVRPLLCHAAGELTGARAECLDAAAAALEMIHVYSLVHDDMP 87
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GDAL F V+ T L P + ++ E+A
Sbjct: 88 CMDDDALRRGKPTVHVKYDEATALLVGDALQSQAF---VALTSDVLAPAQQA-ALVRELA 143
Query: 186 RAVGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEMSEC----SAVCGGFLAGADDD--EIQ 239
A GS GM GQ +DL + + Q + M +AV G LAG D ++
Sbjct: 144 LASGSVGMCGGQAIDLASVGHTLTRTQLETMHRMKTGALLRAAVRMGALAGETPDAAAMR 203
Query: 240 SLRRYGRAVGVLYQVVDDILEA---KAQTPRDEEKKKKKGK-SYVAFYGVEKAMEVAEEL 295
SL Y AVG+ +QVVDDIL+ A + K K GK +YV+ G++ + +A +L
Sbjct: 204 SLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGKDAKDGKPTYVSIIGLDASRALAAQL 263
Query: 296 RAKAKEELDRFKKYGDNVLPLYSFI 320
R+ A L F + L +
Sbjct: 264 RSDAHAALAPFGARAQRLAELADLV 288
>gi|416019022|ref|ZP_11565915.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
B076]
gi|416024129|ref|ZP_11568308.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
race 4]
gi|320321850|gb|EFW77946.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
B076]
gi|320331043|gb|EFW87017.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 295
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/301 (37%), Positives = 155/301 (51%), Gaps = 25/301 (8%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPE--QIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
+ +Y T ++ LEK PE ++YE+MRYSV+ G KR P++ AACE G
Sbjct: 2 IASYQAQSQTRVNAALEKLFQAPSPELNRLYEAMRYSVM-NGGKRVRPLLAYAACEALGG 60
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A ACA+E++HA SL+HDDLP MDDD RRGQP+ H + AILAGD L L
Sbjct: 61 VAEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLA 120
Query: 160 FQHIVSHTPPHLVP---EPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL------VEF 210
F +++ PHL E R L+++ +A A G GM GQ +DL G L +E+
Sbjct: 121 FTALLA---PHLTSRDAETR-LQMVNTLAAAAGPAGMVGGQAIDL-GSVGLKLDQAALEY 175
Query: 211 VQEKKFGEMSECSAVCGGFLAG-ADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP--- 266
+ K G + E S G +G AD + +L+ Y RAVG+ +QV DDIL+ ++ T
Sbjct: 176 MHRHKTGALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLG 235
Query: 267 -RDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAAD 325
R + +Y A G+E A A ELR +A L F + PL Y +
Sbjct: 236 KRQGADIARDKPTYPALLGLEPAKRYALELRDQALTALSPFDAAAE---PLRELARYIVE 292
Query: 326 R 326
R
Sbjct: 293 R 293
>gi|254994133|ref|ZP_05276323.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes FSL
J2-064]
Length = 233
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/226 (37%), Positives = 124/226 (54%), Gaps = 10/226 (4%)
Query: 41 DLKTYWTTLITEIDQNLEKAITVKYPE-QIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
DL + ID++L K I+ + E ++ ESM YSV A G KR P++ A + V
Sbjct: 3 DLTLFLEQYKKVIDESLFKEISERNIEPRLKESMLYSVQAGG-KRIRPMLVFATLQALKV 61
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
N + TA ALEM+H SLIHDDLP MD+D RRG+ +NH V+G AILAGDAL L
Sbjct: 62 NPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNHKVFGDATAILAGDALLTLA 121
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----VQEK 214
F + +L E R+ +I +I+ + G+ GM GQ D+E E V + +
Sbjct: 122 FSILAE--DENLSFETRI-ALINQISFSSGAEGMVGGQLADMEAENKQVTLEELSSIHAR 178
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILE 260
K GE+ + +A AD ++ + LR + +G+ +Q+ DDIL+
Sbjct: 179 KTGELLIFAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILD 224
>gi|167583904|ref|ZP_02376292.1| Polyprenyl synthetase [Burkholderia ubonensis Bu]
Length = 294
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/269 (37%), Positives = 138/269 (51%), Gaps = 22/269 (8%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P Q++E+MRY+VL G KR P++C AA EL G A A ALEM+H SL+HDD+P
Sbjct: 29 PAQLHEAMRYAVLGGG-KRVRPLLCHAAGELTGATEAARNAAAAALEMIHVYSLVHDDMP 87
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GDAL F V+ T + + ++ E+A
Sbjct: 88 CMDDDALRRGKPTVHVQYDEPTALLVGDALQSQAF---VALTDADALAPAQQAALVRELA 144
Query: 186 RAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLAGA--DDDEI 238
A GS GMA GQ +DL +E + K G + +AV G LAG D +
Sbjct: 145 LASGSIGMAGGQAIDLASVGMKLTREQLETMHRMKTGALLR-AAVRMGALAGETPSADAM 203
Query: 239 QSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEV 291
+L Y AVG+ +QVVDDIL+ T K GK +YV+ G++ + E+
Sbjct: 204 AALDVYAAAVGLAFQVVDDILDV---TTDSATLGKTAGKDAANDKPTYVSILGLDASREL 260
Query: 292 AEELRAKAKEELDRFKKYGDNVLPLYSFI 320
A +LRA A L F + L +
Sbjct: 261 AAQLRADAHAALQPFGARAQRLAELADLV 289
>gi|332524231|ref|ZP_08400457.1| farnesyl-diphosphate synthase [Rubrivivax benzoatilyticus JA2]
gi|332107566|gb|EGJ08790.1| farnesyl-diphosphate synthase [Rubrivivax benzoatilyticus JA2]
Length = 296
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/283 (35%), Positives = 144/283 (50%), Gaps = 23/283 (8%)
Query: 36 RSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACE 95
R+ FD + + ++ LE + P + E+MRY VL G KR P++ +AACE
Sbjct: 3 RTLNFD--QWARRQLDAVEAALEAWVPDNAPAGLGEAMRYGVL-DGGKRLRPLLVMAACE 59
Query: 96 LFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDAL 155
G +R AA +ACA+E++HA SL+HDD+PCMD+D RRG+P+ H YG A+LAGDA+
Sbjct: 60 ALGGSREAALRSACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVKYGEAQAMLAGDAM 119
Query: 156 FPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMA------AGQFLDLEGEPNLVE 209
L F+ + + ++R++A A G G G+ LD E L E
Sbjct: 120 QALAFEILTPDEGVEPALQASLVRLLARAAGHAGMAGGQAIDLANTGRLLD---EATLRE 176
Query: 210 FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDE 269
KK G + S G Q+L YG A+G+ +QVVDDIL+ T +
Sbjct: 177 M-HRKKTGALLLVSVQMGAACGSPAPATWQALSEYGEAIGLAFQVVDDILDC---TQASD 232
Query: 270 EKKKKKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDR 305
+ K GK +YV+ G+E A A+ELR +A L R
Sbjct: 233 KLGKTAGKDLEANKPTYVSVLGLEPARRYAQELRTQAHAALAR 275
>gi|406936871|gb|EKD70495.1| hypothetical protein ACD_46C00521G0004 [uncultured bacterium]
Length = 305
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/248 (37%), Positives = 135/248 (54%), Gaps = 23/248 (9%)
Query: 72 SMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDP 131
SM+Y++L G K P++ A +F A A+EM+H SLIHDDLPCMD+
Sbjct: 45 SMQYTLLNSG-KHLRPLLIYATGAIFDAPFENLDIPAAAIEMIHTYSLIHDDLPCMDNAD 103
Query: 132 SRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGST 191
RRG+P+ H VYG +A+L GDAL L Q I +H P L E R+ ++IA + RA GS
Sbjct: 104 LRRGKPACHKVYGDGMAVLTGDALHTLAMQVISTHPAP-LTHEKRI-QMIATLCRACGSF 161
Query: 192 GMAAGQFLDLE--------GEPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEI--QSL 241
GMAAGQ LD+ E L E Q K S C + G +A +DD I +SL
Sbjct: 162 GMAAGQALDITVMNNENTISEKLLTEIYQLKTGALFSACIEL--GRIASNNDDLIHQKSL 219
Query: 242 RRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSYVAFYGVEKAMEVAEELR 296
+ +G +G +Q+ DD+L+++A+T P+ +K K +Y +G+ +A + + L
Sbjct: 220 KEFGDCIGFAFQIQDDVLDSEAETAVIGKPQGIDKHK---MTYPKLFGINEAKQKVQSLY 276
Query: 297 AKAKEELD 304
+ E +D
Sbjct: 277 QQGLEAID 284
>gi|416156489|ref|ZP_11604528.1| geranyltranstransferase [Moraxella catarrhalis 101P30B1]
gi|326574817|gb|EGE24747.1| geranyltranstransferase [Moraxella catarrhalis 101P30B1]
Length = 326
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 149/289 (51%), Gaps = 37/289 (12%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELF---------GVNRIAAFPTAC----ALE 112
PE + + RY+ ++ G K P++ ++ + N C A+E
Sbjct: 49 PEPLNAACRYA-MSNGGKHVRPLLALSTFLMLIQTGDHKNHKNNLTKKLQMVCRAMMAVE 107
Query: 113 MVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLV 172
++H+ SLIHDDLPCMDDD RRGQP+ H VYG DIA+LAGDAL + F+ + +
Sbjct: 108 LIHSYSLIHDDLPCMDDDALRRGQPTCHIVYGEDIALLAGDALQSIAFEVLFECYDKNSA 167
Query: 173 PEP---RVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSA 224
+ ++ ++++ AR M +GQ LD++GE + +E + K G + E +
Sbjct: 168 DDAIAYKLAKLLSCRARR-----MVSGQMLDIKGENQMLSQDKLEAIHRDKTGALIEAAV 222
Query: 225 VCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT-----PRDEEKKKKKGKSY 279
+ G A D + L+ Y RA+G+ +QV DD+L+ A T P ++K +K +Y
Sbjct: 223 MMGAICADVQTDTLGYLKHYARAIGLAFQVQDDVLDITADTITLGKPAGSDEKLEKS-TY 281
Query: 280 VAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
V GV+ A E A +L +A+ ++ K +GDN L L D+ R+F
Sbjct: 282 VKLLGVKGAQEYANQLFEEARSQV---KYWGDNNL-LLQITDWLQTRKF 326
>gi|398977331|ref|ZP_10687048.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM25]
gi|398138075|gb|EJM27105.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM25]
Length = 295
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 154/300 (51%), Gaps = 23/300 (7%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPE--QIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
+ Y T ++ LE PE ++YE+MRYSV+ G KR P++ AACE G
Sbjct: 2 IAAYSATSQARVNAALETLFNAPLPELARLYEAMRYSVM-NGGKRVRPLLAYAACEALGG 60
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A ACA+E++HA SL+HDDLP MDDD RRGQP+ H + AILAGD L L
Sbjct: 61 KAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLA 120
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG-----EPNLVEFVQEK 214
F ++ L + R+ +V A +A A G GM GQ +DL + +E +
Sbjct: 121 FSALLDPRLSDLSADIRLQQVTA-LAHAAGPAGMVGGQAIDLGSVGLKLDQKALEQMHRH 179
Query: 215 KFGEMSECSAVCGGFLAG-ADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKK 273
K G + E S G +G A+ DE++SL+ Y +A+G+ +QV DDIL+ ++ T E K
Sbjct: 180 KTGALIEVSVKLGALASGRAERDELKSLQTYAQAIGLAFQVQDDILDVESDT---ETLGK 236
Query: 274 KKGK-------SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
++G +Y A G++ A A ELR +A L F + PL Y DR
Sbjct: 237 RQGADIARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAAAE---PLRDLARYIVDR 293
>gi|424763036|ref|ZP_18190515.1| geranyltranstransferase [Enterococcus faecium TX1337RF]
gi|431031551|ref|ZP_19490725.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1590]
gi|431758395|ref|ZP_19547022.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E3083]
gi|402423503|gb|EJV55716.1| geranyltranstransferase [Enterococcus faecium TX1337RF]
gi|430564961|gb|ELB04136.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1590]
gi|430617453|gb|ELB54326.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E3083]
Length = 296
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 132/250 (52%), Gaps = 19/250 (7%)
Query: 71 ESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDD 130
++M YSV A G + P ++ A + + A ALEMVH SLIHDDLP MD+D
Sbjct: 33 DAMTYSVKAGGKRIRPLLLLTAVASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPAMDND 92
Query: 131 PSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGS 190
RRG+P+NH V+G +AILAGD L FQ I + HL P++L ++ ++A GS
Sbjct: 93 DLRRGKPTNHKVFGEALAILAGDGLLTGAFQLI---SMAHLGHSPKLL-LLQQLAVCAGS 148
Query: 191 TGMAAGQFLDLEGEPNLVE-----FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYG 245
GM AGQ D+EGE + F+ E+K G + + + GG LA ++ + L+R
Sbjct: 149 QGMVAGQAADIEGELKKLSLEELAFIHERKTGRLIRYALLAGGILAKQPEEILLLLQRLA 208
Query: 246 RAVGVLYQVVDDILEAKAQTP-------RDEEKKKKKGKSYVAFYGVEKAMEVAEELRAK 298
+G+ +Q+ DD+L+ T +DE +K +Y G+EK E E
Sbjct: 209 EHLGLAFQIRDDLLDVIGTTKTLGKTAGKDERMEK---NTYPRLLGLEKTREALEIELLS 265
Query: 299 AKEELDRFKK 308
A + +D+ ++
Sbjct: 266 ANKIIDKLEE 275
>gi|383754044|ref|YP_005432947.1| putative geranylgeranyl pyrophosphate synthase [Selenomonas
ruminantium subsp. lactilytica TAM6421]
gi|381366096|dbj|BAL82924.1| putative geranylgeranyl pyrophosphate synthase [Selenomonas
ruminantium subsp. lactilytica TAM6421]
Length = 293
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/299 (34%), Positives = 151/299 (50%), Gaps = 20/299 (6%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKYP--EQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
+LK W ++ L K + P + + E+M+YS++A G KR PV+ +AA +
Sbjct: 1 MELKKIWQERSALVEAQLVKELNEANPLDKTLCEAMKYSLMAGG-KRLRPVLLMAAADAV 59
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G T CA+EM+H SLIHDDLP MDDD RRG+ +NH VYG +A LAGDAL
Sbjct: 60 GAKGTDYLTTGCAMEMIHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGAGMATLAGDALLT 119
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF-----VQ 212
L F+ I+ V ++++V EI++A G GM GQ LD+E E + +
Sbjct: 120 LAFEVILRQQG---VSAEKLVQVTREISQAAGPDGMVGGQALDMESEDKQISMETMKNIH 176
Query: 213 EKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL-----EAKAQTPR 267
K G + + G L GAD+ + +L Y G+ +Q+ DDIL EA P
Sbjct: 177 LGKTGALFRAAIRSGAILGGADEKALAALTTYADNFGLAFQITDDILDVIGDEAVIGKPV 236
Query: 268 DEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
++K K +YV +E+A ++A+E A +D + +GD L + Y R
Sbjct: 237 GSDEKNHK-STYVTLTSLEEAQKLAQEAVDTA---VDALQIFGDEADFLRELVAYLVKR 291
>gi|163781563|ref|ZP_02176563.1| geranylgeranyl pyrophosphate synthase [Hydrogenivirga sp.
128-5-R1-1]
gi|159882783|gb|EDP76287.1| geranylgeranyl pyrophosphate synthase [Hydrogenivirga sp.
128-5-R1-1]
Length = 266
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 126/243 (51%), Gaps = 18/243 (7%)
Query: 53 IDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALE 112
I+ L + + + P++++E+M Y + G KR P++ VA G + A CA+E
Sbjct: 11 IEDRLRELLVPQQPQELFEAMAYYLFQPG-KRVRPLLTVAVASSLGGDEEDAITVGCAIE 69
Query: 113 MVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLV 172
M+H SLIHDDLP MD+D RRG PS H +G +A+LAGDAL F+ + +
Sbjct: 70 MIHNYSLIHDDLPAMDNDDFRRGLPSCHRKFGEAMAVLAGDALLTYAFELMSKEGVFRTL 129
Query: 173 PEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEMSECSAVCGGFLAG 232
V+++I IA G GM GQ LD+ GE NL E V KK + E + GG ++
Sbjct: 130 SPEEVVKLINTIAVKSGIGGMVGGQALDIGGEENLEE-VNLKKTAALFEACFISGGIVS- 187
Query: 233 ADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVAFYGVEKAMEVA 292
D + L GR G+L+Q+VDDIL+ RD + G E++M A
Sbjct: 188 HRGDLFKELEEVGREFGLLFQLVDDILD------RD---------GFYDLLGEERSMLKA 232
Query: 293 EEL 295
EEL
Sbjct: 233 EEL 235
>gi|440509813|ref|YP_007347249.1| Farnesyl diphosphate synthase [Candidatus Blochmannia chromaiodes
str. 640]
gi|440454026|gb|AGC03518.1| Farnesyl diphosphate synthase [Candidatus Blochmannia chromaiodes
str. 640]
Length = 306
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/275 (34%), Positives = 136/275 (49%), Gaps = 21/275 (7%)
Query: 69 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMD 128
+ +++RYSVL G KR P + +LFGV A A+E +HA SLIHDDLP MD
Sbjct: 36 LMQAIRYSVLLGG-KRLRPFLVYQTGKLFGVRSSNLNAPAAAIECIHAYSLIHDDLPIMD 94
Query: 129 DDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAV 188
+D RRG P+ H +G IA+LAGDAL L F I+S V + L++IA +A A
Sbjct: 95 NDKLRRGHPTCHVKFGESIAVLAGDALHTLAFT-ILSEAHMPTVTDQNRLKMIATLASAS 153
Query: 189 GSTGMAAGQFLDLEGEPN------LVEFVQEKKFGEMSECSAVCGGFLAGAD--DDEIQS 240
G+ GM GQ LDL + N +E + + K G + + G AG DD +
Sbjct: 154 GANGMCLGQSLDLINKNNKNISATQLETIYQYKTGSLIRAAVRIGALAAGNKSCDDVLSF 213
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKS--------YVAFYGVEKAMEVA 292
L Y +G+ +Q+ DDI++ + +KKK+ +S Y G+ A A
Sbjct: 214 LDHYATTIGLAFQIQDDIIDI---SHAYNQKKKRSMQSHHNDVNNTYPKILGLSTARTKA 270
Query: 293 EELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
++L ++ L K G NV L +F Y R
Sbjct: 271 QDLYCESLTSLKYIAKLGYNVNILSAFSRYIIKRN 305
>gi|395232637|ref|ZP_10410887.1| geranyltranstransferase [Enterobacter sp. Ag1]
gi|394733039|gb|EJF32678.1| geranyltranstransferase [Enterobacter sp. Ag1]
Length = 299
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 139/269 (51%), Gaps = 12/269 (4%)
Query: 69 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMD 128
+ E+M Y L G KR P + A E+FGV A A A+E +HA SLIHDDLP MD
Sbjct: 32 LVEAMHYGALLGG-KRLRPFLVYATGEMFGVADEALDAPAAAVECIHAYSLIHDDLPAMD 90
Query: 129 DDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAV 188
+D RRGQP+ H +G + AILAGDAL L F I+S P V L +++E+A A
Sbjct: 91 NDDLRRGQPTCHIKFGEENAILAGDALQTLAFS-ILSDAPMPGVDIADRLAMVSELATAS 149
Query: 189 GSTGMAAGQFLDLEGEPNLVEF-----VQEKKFGEMSECSAVCGGFLAG-ADDDEIQSLR 242
G GM GQ LDLE E V+ + K G + + G AG A + L
Sbjct: 150 GVAGMCGGQALDLEAEGKQVDLASLERIHRHKTGALIRAAVRLGTLSAGEAGRKALPILD 209
Query: 243 RYGRAVGVLYQVVDDILEAKAQTP---RDEEKKKKKGKS-YVAFYGVEKAMEVAEELRAK 298
RY ++G+ +QV DDIL+ T + + ++ GKS Y A G+E+A A++L +
Sbjct: 210 RYAASIGLAFQVQDDILDVVGDTATIGKRQGADQQLGKSTYPALLGLEQAQAKAQDLYQE 269
Query: 299 AKEELDRFKKYGDNVLPLYSFIDYAADRE 327
A + L + + + L + +Y R+
Sbjct: 270 ALQALAELAELSLDTVALEALANYIIHRD 298
>gi|313891715|ref|ZP_07825320.1| geranyltranstransferase [Dialister microaerophilus UPII 345-E]
gi|313119709|gb|EFR42896.1| geranyltranstransferase [Dialister microaerophilus UPII 345-E]
Length = 284
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/259 (34%), Positives = 137/259 (52%), Gaps = 15/259 (5%)
Query: 53 IDQNLEKAITVKYPEQ--IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACA 110
I+++L + + PE +++SM YS+L+ G KR + + E+F V+ + A +
Sbjct: 13 INKHLAGLLKTQRPEHKILFDSMNYSLLSNG-KRIRGCLFLFILEMFKVDYLQYLDIAAS 71
Query: 111 LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPH 170
+E VH SLIHDDLPCMD+D RRG +NH YG +A+ AGDAL FQ I +
Sbjct: 72 VECVHTYSLIHDDLPCMDNDDYRRGILTNHKKYGEGVALQAGDALLTFAFQLI---SQAK 128
Query: 171 LVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEK-----KFGEMSECSAV 225
+ R ++I ++ A G+ GM AGQ D++ E +E + K K G M +
Sbjct: 129 FSAKDRC-KLIEILSIAAGAEGMVAGQVHDIQIENRSIELDELKLLDKFKTGRMIKAPVD 187
Query: 226 CGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGKSYVAFYGV 285
L + + LR++ + +G+L+Q+ DDIL+ K + E K +YV+ G+
Sbjct: 188 MAIQLTHMSISDAEQLRKFAKHLGLLFQITDDILDYKED---NNEIKNTHKNTYVSLLGL 244
Query: 286 EKAMEVAEELRAKAKEELD 304
EKA AEE KA E L+
Sbjct: 245 EKAKLAAEETAYKAIEALE 263
>gi|284006403|emb|CBA71639.1| geranyltranstransferase [Arsenophonus nasoniae]
Length = 302
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 137/271 (50%), Gaps = 13/271 (4%)
Query: 68 QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCM 127
Q+ +M+Y L G KR P + A ++ V A A+E +HA SLIHDDLP M
Sbjct: 33 QLVAAMKYGALLGG-KRLRPFLVYAIGDMLNVAVENLDVPAAAVECIHAFSLIHDDLPAM 91
Query: 128 DDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARA 187
D+D RRGQP+ H +G AILAGDAL L F I+S + V + L +IAE+A A
Sbjct: 92 DNDNLRRGQPTCHISFGEAHAILAGDALQTLAFD-ILSRSAMPDVSDTYRLAMIAELATA 150
Query: 188 VGSTGMAAGQFLDLEGEPNLVEF-----VQEKKFGEMSECSAVCGGFLAGADDDEIQS-L 241
G+ GM GQ LD+E E ++F + K G + + AG +++ L
Sbjct: 151 TGAAGMCGGQALDMESEGQQIDFTTLETIHHHKTGALIRAAIRMSALTAGNQGNKLLPLL 210
Query: 242 RRYGRAVGVLYQVVDDILEAKAQT----PRDEEKKKKKGKSYVAFYGVEKAMEVAEELRA 297
Y A+G+L+QV DDIL+ T KK K +Y + G+E+A + A L
Sbjct: 211 DNYANAIGLLFQVHDDILDVTGDTDILGKNQGSDKKHKKSTYPSLIGLEQAQKKANNLYE 270
Query: 298 KAKEELDRF-KKYGDNVLPLYSFIDYAADRE 327
+A + L ++YG N L + + +R+
Sbjct: 271 QALDTLYMLEQQYGLNTETLQNLTHFIIERK 301
>gi|375108094|ref|ZP_09754355.1| geranylgeranyl pyrophosphate synthase [Burkholderiales bacterium
JOSHI_001]
gi|374668825|gb|EHR73610.1| geranylgeranyl pyrophosphate synthase [Burkholderiales bacterium
JOSHI_001]
Length = 296
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/283 (33%), Positives = 153/283 (54%), Gaps = 24/283 (8%)
Query: 35 LRSTQFDLKTYWT-TLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAA 93
+ S FD+ W+ + +++ LE+ + P + +MRY VL G KR P++ +AA
Sbjct: 1 MNSADFDV---WSRQRLADVEGALERWVPEDTPAGLGVAMRYGVL-DGGKRLRPLLVMAA 56
Query: 94 CELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGD 153
CE + AA A A+E++HA SL+HDD+PCMD+D RRG+P+ H +G A+LAGD
Sbjct: 57 CEAVHGDPAAALRAAVAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVKFGEAQAMLAGD 116
Query: 154 ALFPLGFQHIVSHTPPH-LVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG-----EPNL 207
A+ L F+ + TP +P R+ A +ARA G +GMA GQ +DL +
Sbjct: 117 AMQALAFEVL---TPDDGAMPPAMQARLCALLARAAGHSGMAGGQAIDLASIGKALDEGA 173
Query: 208 VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQT-- 265
+ + +K G + + S + G D ++L YG A+G+ +QVVDDIL+ ++
Sbjct: 174 LRDMHRRKTGALLQASVLMGAACGPVDAPAWKALSDYGAALGLAFQVVDDILDVTQESVT 233
Query: 266 -----PRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEEL 303
+D++ K +YV+ G+E+A A LR +A+ L
Sbjct: 234 LGKTAGKDQDANK---PTYVSVLGLERARAQAHALREQAQAAL 273
>gi|251777602|ref|ZP_04820522.1| putative geranyltranstransferase [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243081917|gb|EES47807.1| putative geranyltranstransferase [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 289
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/268 (37%), Positives = 144/268 (53%), Gaps = 21/268 (7%)
Query: 53 IDQNLEKAITVK--YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACA 110
ID+ L+K + Y + +YES YSV G KR P + + L+ N P A A
Sbjct: 10 IDEYLKKYFINRNSYNKTVYESAGYSV-NIGGKRIRPTLLILTYSLYKDNIEKIMPMAAA 68
Query: 111 LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPH 170
+EM+H SLIHDDLPCMDDD RRG+P+NH V+G +IA+LAGDAL ++ +
Sbjct: 69 IEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGENIAVLAGDALLNEAMTLLMKSS--- 125
Query: 171 LVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAV 225
L LR EI++A G GM GQ +D+ E + E++ EKK GE+ S V
Sbjct: 126 LELGESALRASYEISKAAGPEGMIGGQIVDVLSEVREISKEELEYMHEKKTGELIRVSIV 185
Query: 226 CGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQ-------TPRDEEKKKKKGKS 278
GG LA +I++L YG+ +G+ +Q+ DDIL+ T RD+E K +
Sbjct: 186 AGGILANVPSGDIEALNEYGKKLGLAFQIKDDILDVIGTEETLGKATHRDKELNK---TN 242
Query: 279 YVAFYGVEKAMEVAEELRAKAKEELDRF 306
++ YG+EK E+ + L + + LD
Sbjct: 243 FITVYGLEKCEELCKMLTDECIQILDNL 270
>gi|409397083|ref|ZP_11248026.1| geranyltranstransferase [Pseudomonas sp. Chol1]
gi|409118585|gb|EKM94984.1| geranyltranstransferase [Pseudomonas sp. Chol1]
Length = 296
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 108/291 (37%), Positives = 149/291 (51%), Gaps = 20/291 (6%)
Query: 45 YWTTLITEIDQNLEKAITVKYP--EQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRI 102
Y +D LE P E++Y++MRYSV+ G KR P++ AACE +R
Sbjct: 6 YQKDCQQRVDSCLEALFAPPRPQLERLYQAMRYSVM-NGGKRVRPLLVYAACEALRGDRA 64
Query: 103 AAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQH 162
A ACA+E++HA SL+HDDLP MDDD RRGQP+ H + AILAGD L L F+
Sbjct: 65 TADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEA 124
Query: 163 IVS--HTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL------VEFVQEK 214
+ H PP LR+ A +ARA G GM GQ +DL G L +E +
Sbjct: 125 MAEARHNPPDAALR---LRMFAVLARAAGPAGMVGGQAIDL-GSVGLKLDREALELMHRH 180
Query: 215 KFGEMSECSAVCGGFLAG-ADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKK- 272
K G + E S G +G AD D + +L Y RA+G+ +QV DDIL+ ++ T + +
Sbjct: 181 KTGALIEASVQLGALASGHADADSLGALSHYARAIGLAFQVQDDILDVESDTATLGKHQG 240
Query: 273 ---KKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+ +Y A G++ A A ELR +A L F + + L FI
Sbjct: 241 ADIARDKPTYPALLGLDAAKAYAIELRDQALHALRPFDIAAEPLRDLARFI 291
>gi|388456998|ref|ZP_10139293.1| polyprenyl synthetase [Fluoribacter dumoffii Tex-KL]
Length = 299
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 142/278 (51%), Gaps = 21/278 (7%)
Query: 64 KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDD 123
K P +++++MRY+VL G KR + A E G + A+EM+HA SLIHDD
Sbjct: 30 KQPAELHKAMRYAVL-NGGKRIRAALVYATGEALGADFDVLDHIGSAIEMIHAFSLIHDD 88
Query: 124 LPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAE 183
LP +D+D RRG+PS H + AILAGDAL L F+ I S + E + +I
Sbjct: 89 LPALDNDDLRRGKPSCHKAFSEATAILAGDALQTLAFETIASLDKNKIAVEIEI-EMIRL 147
Query: 184 IARAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEI 238
+ARA+GS GMA G+ LD+E + N +E + K G + S + G A D I
Sbjct: 148 LARAIGSLGMAGGEELDIEMKDKDVSLNELENTYKLKTGYLLTASILLGALAANCHDKNI 207
Query: 239 -QSLRRYGRAVGVLYQVVDDI--LEAKAQT-----PRDEEKKKKKGKSYVAFYGVEKAME 290
+L+++G +G+ +Q+ DDI +E+ QT D+E+ K +Y G+ KA +
Sbjct: 208 LNNLQKFGDYIGLAFQIHDDIIGIESDTQTLGKHQGSDQERNK---PTYPTLIGMRKAKQ 264
Query: 291 VAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADREF 328
E+ KA L K G V L + Y +R F
Sbjct: 265 KENEIFNKA---LKHLNKTGIPVNKLEAIARYVVNRNF 299
>gi|345875754|ref|ZP_08827543.1| geranyltranstransferase [Neisseria weaveri LMG 5135]
gi|417957382|ref|ZP_12600305.1| geranyltranstransferase [Neisseria weaveri ATCC 51223]
gi|343968389|gb|EGV36618.1| geranyltranstransferase [Neisseria weaveri ATCC 51223]
gi|343968452|gb|EGV36680.1| geranyltranstransferase [Neisseria weaveri LMG 5135]
Length = 298
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 159/305 (52%), Gaps = 25/305 (8%)
Query: 29 VSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPV 88
++ A+ L++ Q + + T L+ E EK + P +++E+MRY L G KR P+
Sbjct: 1 MNKANDLKAWQHKAQAH-TELVLERLMPSEKNV----PSKLHEAMRYVTLGGG-KRLRPL 54
Query: 89 MCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIA 148
+ +AA EL + A A+EM+H SL+HDD+P MD+D RRG+P+ H Y A
Sbjct: 55 LVLAASELGEADATAVEQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGKPTCHVQYDEATA 114
Query: 149 ILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLE--GEP- 205
+L GDAL F + + P +P R L +++ +A+A GS GMA GQ +DL G+P
Sbjct: 115 LLVGDALQTQAFDVL---SRPCGLPAARQLNMLSVLAKASGSFGMAGGQAIDLANVGKPM 171
Query: 206 --NLVEFVQEKKFGEMSECSAVCGGFLA-GADDDEIQSLRRYGRAVGVLYQVVDDILEAK 262
+E + K G + + G G DD + +L Y +G+ +QV+DD+L+ +
Sbjct: 172 TQTELEQMHGLKTGALIRAAVALGALSCPGLDDTALAALDNYATNLGLAFQVIDDVLDCE 231
Query: 263 AQTP-------RDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLP 315
A T +D + K +YV G+E+A AE+L A+A L+ F + ++
Sbjct: 232 ADTATLGKTAGKDADNDK---PTYVKLMGLEQARSYAEQLIAEATIYLESFGEKAVHLRL 288
Query: 316 LYSFI 320
L F+
Sbjct: 289 LAEFV 293
>gi|49474704|ref|YP_032746.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
quintana str. Toulouse]
gi|49240208|emb|CAF26676.1| Geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
quintana str. Toulouse]
Length = 301
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 147/293 (50%), Gaps = 26/293 (8%)
Query: 48 TLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPT 107
TL+++ QN E + PE + ++MRY VL G KR P + + + LF +
Sbjct: 21 TLLSDQVQNGE----ISRPEALIKAMRYGVL-NGGKRLRPFLVIQSGALFDIPAEYCLDV 75
Query: 108 ACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHT 167
A ALE VH SLIHDDLP MD+D RRGQP+ H + AILAG+AL F+ I++H
Sbjct: 76 ASALECVHCYSLIHDDLPAMDNDTLRRGQPTVHIAFDEATAILAGNALLTFAFE-IIAHK 134
Query: 168 PPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN------LVEFVQEKKFGEMSE 221
L E ++ ++I +A++ G GM GQ LDLE E + +Q K +
Sbjct: 135 ASTLPFETKI-KLITTLAQSAGLGGMIGGQMLDLEAEKKPQDSAISILTLQHMKTAALIS 193
Query: 222 CSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP-------RDEEKKKK 274
+ G + A + + L +G +G+ +Q+ DD+L+ A T +DE +K
Sbjct: 194 FACQAGAIIGNASKELTEKLAAFGTYLGLAFQLTDDLLDITASTEILGKTAGKDETAQK- 252
Query: 275 KGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
++V YG+++ + + L AKA+ L F G PL ++A R+
Sbjct: 253 --ATFVRLYGIQETQKKRDGLIAKAEALLLPF---GTKAKPLQQAAHFSATRK 300
>gi|381405458|ref|ZP_09930142.1| polyprenyl synthetase [Pantoea sp. Sc1]
gi|380738657|gb|EIB99720.1| polyprenyl synthetase [Pantoea sp. Sc1]
Length = 299
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/237 (38%), Positives = 123/237 (51%), Gaps = 12/237 (5%)
Query: 69 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMD 128
+ +M Y L G KR P + A E+ + + A A+E +HA SLIHDDLP MD
Sbjct: 32 LVNAMHYGALLGG-KRLRPFLVYATGEMLRADPASLDAPAAAVECIHAYSLIHDDLPAMD 90
Query: 129 DDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAV 188
DD RRGQP+ H YG D AILAGDAL L F + P + E R LR+I+E+A A
Sbjct: 91 DDALRRGQPTCHIKYGEDTAILAGDALQTLAFSILTDEAMPGVSAEYR-LRMISELANAS 149
Query: 189 GSTGMAAGQFLDLEGEPNLVEF-----VQEKKFGEMSECSAVCGGFLAG-ADDDEIQSLR 242
G GM GQ LDL E V+ + K G + + G F AG A + + L
Sbjct: 150 GVAGMCGGQALDLAAEGKSVDLDQLEQIHRHKTGALIRSAVRLGAFTAGDAGREALPLLD 209
Query: 243 RYGRAVGVLYQVVDDILEAKAQTP---RDEEKKKKKGKS-YVAFYGVEKAMEVAEEL 295
RY A+G+ +QV DDIL+ T + + ++ GKS Y + G+E A A +L
Sbjct: 210 RYAEAIGLAFQVQDDILDVVGDTAVIGKRQGADQQLGKSTYPSLLGLENARAKARDL 266
>gi|384135407|ref|YP_005518121.1| polyprenyl synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
gi|339289492|gb|AEJ43602.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 294
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/245 (39%), Positives = 144/245 (58%), Gaps = 12/245 (4%)
Query: 68 QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCM 127
++ E+M YS++A+G KR P + +A E FGV R P A A+E++H SLIHDDLPCM
Sbjct: 31 RLKEAMNYSLMAEG-KRLRPALVMATAETFGVPRDRVLPAAAAVELIHCYSLIHDDLPCM 89
Query: 128 DDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARA 187
DDD RRGQP+NH V+G +A+LAGDAL F H+++ P VP R L +I +A
Sbjct: 90 DDDDLRRGQPTNHVVFGEAMALLAGDALLTEAF-HLLAR-PLEGVPAERQLAMIRTLASR 147
Query: 188 VGSTGMAAGQFLDLE---GEPNL--VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLR 242
G GM GQ +D+E G+ L VEF+ K + + GG+ D+ QSL
Sbjct: 148 AGVDGMVGGQAVDIERTGGQGTLQDVEFIHLHKTARLIQACVEIGGYFVDLDEQVRQSLS 207
Query: 243 RYGRAVGVLYQVVDDILE---AKAQTPRDEEKKKKKGK-SYVAFYGVEKAMEVAEELRAK 298
YG +G+ +Q++DD+L+ + AQ + K ++GK +Y F GVEK ++A ++ +
Sbjct: 208 CYGECLGLAFQMIDDVLDETASTAQLGKTAGKDAEEGKLTYPRFVGVEKTRQMARDVIRR 267
Query: 299 AKEEL 303
++ L
Sbjct: 268 GEQAL 272
>gi|71892019|ref|YP_277749.1| geranyltranstransferase [Candidatus Blochmannia pennsylvanicus str.
BPEN]
gi|71796125|gb|AAZ40876.1| geranyltranstransferase [Candidatus Blochmannia pennsylvanicus str.
BPEN]
Length = 306
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 134/274 (48%), Gaps = 19/274 (6%)
Query: 69 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMD 128
+ +++RYSVL G KR P + +LFG+ A A+E +HA SLIHDDLP MD
Sbjct: 36 LMQAIRYSVLLGG-KRLRPFLVYQTGKLFGIRSSNLNAPAAAIECIHAYSLIHDDLPIMD 94
Query: 129 DDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAV 188
+D RRG P+ H +G IA+LAGDAL L F + P + + R L++IA +A A
Sbjct: 95 NDKLRRGHPTCHVKFGESIAVLAGDALHTLAFTILSEAHMPTITDQDR-LKMIATLASAS 153
Query: 189 GSTGMAAGQFLDLEGEPN------LVEFVQEKKFGEMSECSAVCGGFLAGAD--DDEIQS 240
G+ GM GQ LDL + N +E + + K G + + G AG DD +
Sbjct: 154 GANGMCLGQSLDLINKNNKNISATQLETIYQYKTGSLIRAAVRIGALAAGNKSCDDVLSF 213
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKK-------GKSYVAFYGVEKAMEVAE 293
L Y +G+ +Q+ DDI++ D++KK +Y G+ A A+
Sbjct: 214 LDHYATTIGLAFQIQDDIIDISH--AYDQKKKHSMQSQHNDVNNTYPKILGLSTARTKAQ 271
Query: 294 ELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+L ++ L K G NV L +F Y R
Sbjct: 272 DLYCESLTSLKYIAKLGYNVNILSAFSRYIIKRN 305
>gi|310942864|pdb|3OAB|B Chain B, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942865|pdb|3OAB|C Chain C, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942868|pdb|3OAC|B Chain B, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942869|pdb|3OAC|C Chain C, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
Length = 264
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 133/252 (52%), Gaps = 27/252 (10%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNR 101
++ YW + +I++ L+K+IT++ PE ++ M + A A +C+AACEL G +R
Sbjct: 1 MQPYWAAIEADIERYLKKSITIRPPETVFGPMHHLTFAA-PATAASTLCLAACELVGGDR 59
Query: 102 IAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQ 161
A A A+ +VHAA+ +H+ LP P+ YG ++ +L GD + P GF+
Sbjct: 60 SQAMAAAAAIHLVHAAAYVHEHLP-----------PAIQHKYGPNVELLTGDGIVPFGFE 108
Query: 162 HIVSHTPPHLVPEP-RVLRVIAEIARAVGSTGMAAG-----QFLDLEGEPNLVEFVQEKK 215
+ P +P R+LRVI EI+RA G GM +G + +D + +E+V +KK
Sbjct: 109 LLAGSVDPARTDDPDRILRVIIEISRAGGPEGMISGLHREEEIVDGNTSLDFIEYVCKKK 168
Query: 216 FGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVL---------YQVVDDILEAKAQTP 266
+GEM C A CG L GA ++EIQ LR +G G L +Q++D+ + K +
Sbjct: 169 YGEMHACGAACGAILGGAAEEEIQKLRNFGLYQGTLRGMMEMKNSHQLIDENIIGKLKEL 228
Query: 267 RDEEKKKKKGKS 278
EE GK+
Sbjct: 229 ALEELGGFHGKN 240
>gi|229111653|ref|ZP_04241203.1| Geranyltranstransferase [Bacillus cereus Rock1-15]
gi|423585339|ref|ZP_17561426.1| hypothetical protein IIE_00751 [Bacillus cereus VD045]
gi|228671788|gb|EEL27082.1| Geranyltranstransferase [Bacillus cereus Rock1-15]
gi|401233982|gb|EJR40468.1| hypothetical protein IIE_00751 [Bacillus cereus VD045]
Length = 296
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/247 (36%), Positives = 141/247 (57%), Gaps = 17/247 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + E+M YS L G KR P++ A + FG R ACALEM+H SL+HDDLP
Sbjct: 30 PNVLREAMAYS-LEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLP 88
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH V+G +A+LAGD L FQ I+++ + E +V R++ E+A
Sbjct: 89 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKV-RLVLELA 147
Query: 186 RAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM GQ D+E E + +E++ + K G++ E + + G L+ A +++ +
Sbjct: 148 KAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEK 207
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVAE 293
L + + +G+ +Q+ DDIL+ + +EE K G +Y + V++A + E
Sbjct: 208 LLTFAKYIGLAFQIRDDILDVEGT---EEEIGKPIGSDLSNEKSTYTTLFTVDRAKAILE 264
Query: 294 ELRAKAK 300
E A+AK
Sbjct: 265 ETIAEAK 271
>gi|85711191|ref|ZP_01042251.1| Geranylgeranyl pyrophosphate synthase [Idiomarina baltica OS145]
gi|85695104|gb|EAQ33042.1| Geranylgeranyl pyrophosphate synthase [Idiomarina baltica OS145]
Length = 295
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 140/280 (50%), Gaps = 17/280 (6%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKY-PEQIYESMRYSVLAKGTKRAPPVMCVAACELFG 98
++K + + + +D L + I + E+M Y VL G KR P + +A EL G
Sbjct: 1 MNIKQFTAEVRSAVDNRLNQLIESHIASSSLKEAMAYGVLLGG-KRIRPYLTMAVAELCG 59
Query: 99 VNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPL 158
A ACA+E++HA SLIHDDLP MDDD RRG P+ H +G A+LAGDAL L
Sbjct: 60 AETNDALDAACAVELIHAYSLIHDDLPAMDDDELRRGHPTCHIKFGEATAVLAGDALQTL 119
Query: 159 GFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQE 213
F+ + ++ L + R+ +I +A A G+ GM GQ LDL+ + E +
Sbjct: 120 AFEVLSTNLETKLSSQRRI-AMIQHLASASGAKGMCFGQALDLDATGRAIDELELEKIHR 178
Query: 214 KKFGEMSECSAVCGGFLAGADDDE--IQSLRRYGRAVGVLYQVVDDILEAKAQT-----P 266
K G + SA G LAG D+ + + + +G+ YQV DDIL+ T P
Sbjct: 179 HKTGALIRASAAL-GVLAGNDESQQYLDHFCDFASWIGLAYQVYDDILDVVGNTEVMGKP 237
Query: 267 RDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRF 306
+ ++ K +YVA G++ A E L +A L++
Sbjct: 238 QGSDEAHHKA-TYVALLGLDGASEKLLSLHQQALLSLNKI 276
>gi|347757577|ref|YP_004865139.1| geranyltranstransferase [Micavibrio aeruginosavorus ARL-13]
gi|347590095|gb|AEP09137.1| geranyltranstransferase [Micavibrio aeruginosavorus ARL-13]
Length = 304
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 147/288 (51%), Gaps = 26/288 (9%)
Query: 50 ITEIDQNLEKAITVKYPEQ------IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIA 103
+ EI + + K I PE ++E+MRY L G KR P M + + +LFGV+
Sbjct: 16 MNEISEAVNKTIMRLLPESDLPEAPLFEAMRYGTL-NGGKRLRPFMLMQSAKLFGVDMAR 74
Query: 104 AFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHI 163
A A A+E VHA SL+HDDLP MD+ RRG+PS H Y AILAGDAL L F+ +
Sbjct: 75 ARRAAAAVEFVHAYSLVHDDLPAMDNADLRRGKPSTHKAYDEATAILAGDALLTLAFE-V 133
Query: 164 VSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN-----LVEFVQEKKFGE 218
+S H P RV ++ +A+A G G+ GQ LDL GE + +Q K G+
Sbjct: 134 LSDVETHEDPRVRV-ELVNLLAKASGPHGLCGGQMLDLIGEKQEFDLGTISRLQRMKTGK 192
Query: 219 MSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQ---TPRDEEKKKKK 275
+ + G L A + ++L Y +G+ +QV DDIL+ ++ +D K +
Sbjct: 193 LMAFACEAGAVLGKASEPMRKALCNYAYDLGLAFQVTDDILDVESSPEAMGKDTGKDAQA 252
Query: 276 GKS-YVAFYGVEKAMEVAEELRAKAKEEL--------DRFKKYGDNVL 314
GKS +V+ G ++A A+ L ++K L D K+ D VL
Sbjct: 253 GKSTFVSTMGKDQARARAQMLVEQSKRHLHIFDNGRADTLKELADYVL 300
>gi|291562669|emb|CBL41485.1| Geranylgeranyl pyrophosphate synthase [butyrate-producing bacterium
SS3/4]
Length = 297
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 140/276 (50%), Gaps = 22/276 (7%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
+ + I+E+M YSV A G KR P++ LFG N P A+EM+H +SLIHDDL
Sbjct: 30 HQKTIFEAMNYSVKA-GGKRLRPLLMREVYRLFGGNGPEIKPFMAAMEMIHTSSLIHDDL 88
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEP-RVLRVIAE 183
PCMD+D RRG+ + YG D+A+LAGDAL F+ + + +P + R I
Sbjct: 89 PCMDNDEYRRGKLTTWKAYGYDMAVLAGDALMIYAFE--TASKAFSMGADPAKAGRAIGI 146
Query: 184 IARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEI 238
+A G GM GQ +D+E V +F+ K G + E S + G LAGA +EI
Sbjct: 147 LAEKTGIYGMIGGQTVDVELTGKAVPREKLDFIYRLKTGALLEASMMIGAVLAGATVEEI 206
Query: 239 QSLRRYGRAVGVLYQVVDDILEAKAQTPRDEE-------KKKKKGKSYVAFYGVEKAMEV 291
+ + VG+ +Q+ DDIL+ T EE +K + +YV G+EKA
Sbjct: 207 KEVETMASEVGLAFQIQDDILDV---TSTQEELGKPVLSDEKNEKTTYVTLEGLEKAKRD 263
Query: 292 AEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+E+ +A L G N LY+ I+ +R+
Sbjct: 264 VKEISDRAAGRLAGLP--GKNEF-LYNIIEMLVNRK 296
>gi|398983680|ref|ZP_10690144.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM24]
gi|399012337|ref|ZP_10714661.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM16]
gi|398115899|gb|EJM05672.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM16]
gi|398156852|gb|EJM45264.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM24]
Length = 295
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 105/297 (35%), Positives = 153/297 (51%), Gaps = 17/297 (5%)
Query: 42 LKTYWTTLITEIDQNLEKAITVKYPE--QIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
+ Y T T ++ LE PE ++YE+MRYSV+ G KR P++ AACE G
Sbjct: 2 IAAYTATSQTRVNAALETLFNAPLPELARLYEAMRYSVM-NGGKRVRPLLAYAACEALGG 60
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A ACA+E++HA SL+HDDLP MDDD RRGQP+ H + AILAGD L L
Sbjct: 61 KAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLA 120
Query: 160 FQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG-----EPNLVEFVQEK 214
F ++ + R L+++ +A+A G GM GQ +DL + N +E +
Sbjct: 121 FSALLDPRLSDCSSDIR-LQMVTALAQAAGPAGMVGGQAIDLGSVGLKLDQNALEQMHRH 179
Query: 215 KFGEMSECSAVCGGFLAG-ADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP----RDE 269
K G + E S G +G A+ DE+++L+ Y +A+G+ +QV DDIL+ ++ T R
Sbjct: 180 KTGALIEVSVKLGALASGRAEQDELRALQTYAQAIGLAFQVQDDILDVESDTATLGKRQG 239
Query: 270 EKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
+ +Y A G++ A A ELR +A L F + PL Y +R
Sbjct: 240 ADIARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAAAE---PLRELARYIVER 293
>gi|335049359|ref|ZP_08542358.1| geranyltranstransferase [Megasphaera sp. UPII 199-6]
gi|333763496|gb|EGL40945.1| geranyltranstransferase [Megasphaera sp. UPII 199-6]
Length = 295
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 138/265 (52%), Gaps = 18/265 (6%)
Query: 43 KTYWTTLITEIDQNLEKAITVKYPE--QIYESMRYSVLAKGTKRAPPVMCVAACELFGVN 100
+ Y T I+ +L++ + V P +Y++M YS+LA G KR P++ +AA E G
Sbjct: 5 EAYLAAKKTVIEAHLQQLLPVTEPAFAPLYKAMNYSLLAGG-KRIRPILFLAALEALGKE 63
Query: 101 RIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGF 160
ACALE VH+ SLIHDDLP MD+D RRG+P+NH V+G +AILAGD L F
Sbjct: 64 SSVYMDVACALECVHSYSLIHDDLPAMDNDDLRRGKPTNHRVFGEGMAILAGDGLLTFAF 123
Query: 161 QHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQEK 214
+ + + ++ I +A A G GM GQ DL EG ++ ++ +
Sbjct: 124 ELLARQ---RVADAEKIGACIRVLAHAAGPAGMVGGQAYDLLSEGHGDIGTEGLKLMHRG 180
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL-----EAKAQTPRDE 269
K G + E G LA A Q L+ Y +G+ +Q+ DDIL EA+ P
Sbjct: 181 KTGVIFEAVMSMAGILAAAPAAVRQVLQVYAEQLGLTFQITDDILDACGTEAELGKPVGS 240
Query: 270 EKKKKKGKSYVAFYGVEKAMEVAEE 294
+ K K +YV + ++KA ++A+E
Sbjct: 241 DVKNNKA-TYVTLFSLDKAKQLAQE 264
>gi|431594933|ref|ZP_19522039.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1861]
gi|430590859|gb|ELB28905.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1861]
Length = 296
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 136/251 (54%), Gaps = 21/251 (8%)
Query: 71 ESMRYSVLAKGTKRAPPVMCVAACELFGV-NRIAAFPTACALEMVHAASLIHDDLPCMDD 129
++M YSV A G KR P++ +AA F + + A ALEMVH SLIHDDLP MD+
Sbjct: 33 DAMTYSVKA-GGKRIRPLLLLAAVASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPAMDN 91
Query: 130 DPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVG 189
D RRG+P+NH V+G +AILAGD L FQ I + HL P++L ++ ++A G
Sbjct: 92 DDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLI---SMAHLGHSPKLL-LLQQLAVCAG 147
Query: 190 STGMAAGQFLDLEGEPNLVE-----FVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRY 244
+ GM AGQ D+EGE + F+ E+K G + + + GG LA ++ + L+R
Sbjct: 148 AQGMVAGQAADIEGESKKLSLEELAFIHERKTGRLIRYALLAGGILAKQPEEILLLLQRL 207
Query: 245 GRAVGVLYQVVDDILEAKAQTP-------RDEEKKKKKGKSYVAFYGVEKAMEVAEELRA 297
+G+ +Q+ DD+L+ T +DE +K +Y G+EK E E
Sbjct: 208 AEHLGLAFQIRDDLLDVIGITKTLGKTAGKDERMEK---NTYPRLLGLEKTHEALEIELL 264
Query: 298 KAKEELDRFKK 308
A + +D+ ++
Sbjct: 265 SANKIIDKLEE 275
>gi|290968311|ref|ZP_06559853.1| geranyltranstransferase [Megasphaera genomosp. type_1 str. 28L]
gi|290781670|gb|EFD94256.1| geranyltranstransferase [Megasphaera genomosp. type_1 str. 28L]
Length = 295
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 137/265 (51%), Gaps = 18/265 (6%)
Query: 43 KTYWTTLITEIDQNLEKAITVKYPE--QIYESMRYSVLAKGTKRAPPVMCVAACELFGVN 100
+ Y T I+ L++ + V P +Y++M YS+LA G KR P++ +AA E G
Sbjct: 5 EAYLAAKKTVIEARLQQLLPVTEPAFAPLYKAMNYSLLAGG-KRIRPILFLAALEALGKE 63
Query: 101 RIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGF 160
ACALE VH+ SLIHDDLP MD+D RRG+P+NH V+G +AILAGD L F
Sbjct: 64 SSVYMDVACALECVHSYSLIHDDLPAMDNDDLRRGKPTNHRVFGEGMAILAGDGLLTFAF 123
Query: 161 QHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEPNL----VEFVQEK 214
+ + + ++ I +A A G GM GQ DL EG ++ ++ +
Sbjct: 124 ELLARQ---RVADAEKIGACIRVLAHAAGPAGMVGGQAYDLLSEGHGDIGTEGLKLMHRG 180
Query: 215 KFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDIL-----EAKAQTPRDE 269
K G + E G LA A Q L+ Y +G+ +Q+ DDIL EA+ P
Sbjct: 181 KTGVIFEAVMSMAGILAAAPAAVRQVLQAYAEQLGLTFQITDDILDACGTEAELGKPVGS 240
Query: 270 EKKKKKGKSYVAFYGVEKAMEVAEE 294
+ K K +YV + ++KA ++A+E
Sbjct: 241 DVKNNKA-TYVTLFSLDKAKQLAQE 264
>gi|298370440|ref|ZP_06981756.1| geranyltranstransferase [Neisseria sp. oral taxon 014 str. F0314]
gi|298281900|gb|EFI23389.1| geranyltranstransferase [Neisseria sp. oral taxon 014 str. F0314]
Length = 298
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 139/270 (51%), Gaps = 20/270 (7%)
Query: 64 KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDD 123
+ P ++E+MRY L G KR P++ +AA EL ++ A A+EMVH SL+HDD
Sbjct: 31 QVPHTLHEAMRYVTLGGG-KRLRPLLVLAASELGDADQNAVEQAMAAIEMVHVYSLVHDD 89
Query: 124 LPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAE 183
+P MD+D RRG+P+ H Y A+L GDAL F + + P +P R + +++
Sbjct: 90 MPAMDNDSLRRGKPTCHVKYDEATALLVGDALQTQAFDVL---SRPTGLPAERQIAMLST 146
Query: 184 IARAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKKFGEMSECSAVCGGFLA-GADDDE 237
+A+A GS GMA GQ +DL +E + K G + +AV G D D+
Sbjct: 147 LAKASGSLGMAGGQAIDLANVGKAMNQAQLEQMHSLKTGALIRAAAVLGALACPDLDSDD 206
Query: 238 IQSLRRYGRAVGVLYQVVDDILEAKAQTP-------RDEEKKKKKGKSYVAFYGVEKAME 290
+++L Y +G+ +QV+DD+L+ +A T +D + K +YV G++ A
Sbjct: 207 VRTLDNYAAKLGLAFQVIDDVLDCEADTATLGKTAGKDSDNDK---PTYVKLMGLQTARA 263
Query: 291 VAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
AE L A+A L+ F + L F+
Sbjct: 264 YAETLTAEATALLEPFGAKALRLNQLAQFV 293
>gi|398845184|ref|ZP_10602227.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM84]
gi|398253838|gb|EJN38952.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM84]
Length = 295
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 154/299 (51%), Gaps = 21/299 (7%)
Query: 42 LKTYWTTLITEIDQNLEKAITV--KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGV 99
+ Y + +D LE K E++Y +MRYSV+ G KR P++ AACE G
Sbjct: 2 ISAYQASSQARVDAALEPLFVAPAKELERLYAAMRYSVM-NGGKRVRPLLAYAACEALGA 60
Query: 100 NRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLG 159
A ACA+E++HA SL+HDDLP MDDD RRGQP+ H + AILAGD L L
Sbjct: 61 PADQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLA 120
Query: 160 FQHIVSHTPPHLVPEPRVLRV--IAEIARAVGSTGMAAGQFLDLEG-----EPNLVEFVQ 212
F ++ P L P+ +R+ + +A+A G GM GQ +DL + +E++
Sbjct: 121 FSALLD---PRLSPQSDAIRLAMVQALAKAAGPAGMVGGQAIDLGSVGLKLDQQALEYMH 177
Query: 213 EKKFGEMSECSAVCGGFLAG-ADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTP----R 267
K G + E S G +G A+ ++ +L+ Y +A+G+ +QV DDIL+ ++ T R
Sbjct: 178 RHKTGALIEASVRLGALASGRAEQPQLDALQTYAQAIGLAFQVQDDILDVESDTATLGKR 237
Query: 268 DEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADR 326
+ +Y A G+E A A ELR +A L + G+N PL + Y +R
Sbjct: 238 QGADVARDKPTYPALLGLEAAKAYAIELRDQA---LFALEGLGENAEPLRALARYIVER 293
>gi|197284007|ref|YP_002149879.1| geranyltranstransferase [Proteus mirabilis HI4320]
gi|227358123|ref|ZP_03842464.1| geranyltranstransferase [Proteus mirabilis ATCC 29906]
gi|425066900|ref|ZP_18470016.1| hypothetical protein HMPREF1311_00031 [Proteus mirabilis WGLW6]
gi|194681494|emb|CAR40356.1| geranyltranstransferase [Proteus mirabilis HI4320]
gi|227161459|gb|EEI46496.1| geranyltranstransferase [Proteus mirabilis ATCC 29906]
gi|404601571|gb|EKB01963.1| hypothetical protein HMPREF1311_00031 [Proteus mirabilis WGLW6]
Length = 307
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 98/290 (33%), Positives = 152/290 (52%), Gaps = 20/290 (6%)
Query: 53 IDQNLEKAI-TVKYPEQ-IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACA 110
+D+ L +A+ T+ + + + ++MRY L G KR P + A E+F V A A
Sbjct: 22 VDEALNQALQTLPFSDMPLSQAMRYGALLGG-KRLRPFLVYAVGEMFNVPVANLDVPAAA 80
Query: 111 LEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPH 170
+E +HA SLIHDDLP MD+D RRG+P+ H +G AILAGDAL L F+ + + P
Sbjct: 81 IECIHAYSLIHDDLPAMDNDDLRRGKPTCHIEFGEANAILAGDALQTLAFEILAKNAMPD 140
Query: 171 LVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEKKF-----GEMSECSAV 225
+ RV +IAE+A A G GM GQ LDL+ E ++ V +K G + +
Sbjct: 141 VAIADRV-AMIAELATASGLAGMCGGQALDLDAEDKSIDLVALEKIHLHKTGALIRAAVR 199
Query: 226 CGGFLAGAD-DDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------K 277
G AG D + +L +Y ++G+ +QV DDIL+ T EE K++G
Sbjct: 200 LGALSAGQKGHDVLPALDKYAHSIGLAFQVQDDILDVIGST---EETGKRQGSDQEAGKS 256
Query: 278 SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFIDYAADRE 327
+Y A G+ +A + A+EL +A + L ++Y + L ++ +R+
Sbjct: 257 TYPALLGLAQAQKKAQELYNEALDALAFLEQYEYDTSTLKQLANFIVERK 306
>gi|228960446|ref|ZP_04122097.1| Geranyltranstransferase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|423630903|ref|ZP_17606650.1| hypothetical protein IK5_03753 [Bacillus cereus VD154]
gi|228799210|gb|EEM46176.1| Geranyltranstransferase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|401264270|gb|EJR70382.1| hypothetical protein IK5_03753 [Bacillus cereus VD154]
Length = 296
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/247 (36%), Positives = 142/247 (57%), Gaps = 17/247 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + E+M YS L G KR P++ A + FG R ACALEM+H SL+HDDLP
Sbjct: 30 PNVLREAMAYS-LEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDDLP 88
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH V+G +A+LAGD L FQ I+++ + E +V R++ E+A
Sbjct: 89 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKV-RLVLELA 147
Query: 186 RAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM GQ D++ E + +E++ + K G++ E + + G L+ A +++ +
Sbjct: 148 KAAGPEGMVGGQVADMDAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEEK 207
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVAE 293
L + + +G+ +Q+ DDIL+ + +EE K G +Y + V++A ++ E
Sbjct: 208 LLTFAKYIGLAFQIRDDILDVEGT---EEEIGKPIGSDLSNEKSTYTTLFTVDRAKDILE 264
Query: 294 ELRAKAK 300
E A+AK
Sbjct: 265 ETIAEAK 271
>gi|115522205|ref|YP_779116.1| polyprenyl synthetase [Rhodopseudomonas palustris BisA53]
gi|115516152|gb|ABJ04136.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisA53]
Length = 308
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 142/294 (48%), Gaps = 32/294 (10%)
Query: 44 TYWTTLITEIDQNLEKAIT--------------VKYPEQIYESMRYSVLAKGTKRAPPVM 89
T+ T +DQ E T + P+++ E++RYS L G KR P +
Sbjct: 5 TFPTDFAQRLDQTAEDTETQLASLLSDALLPDEIARPKRLMEAIRYSTLGGG-KRLRPFL 63
Query: 90 CVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAI 149
V + +FGV R AA ALE +H SLIHDDLP MD+ RRG+P+ H Y AI
Sbjct: 64 VVESAAVFGVPRAAALLVGAALECIHCYSLIHDDLPSMDNSDLRRGRPTLHKAYDDATAI 123
Query: 150 LAGDALFPLGFQHIVSHTPPHLVPEPRV-LRVIAEIARAVGSTGMAAGQFLDLEG----- 203
LAGDAL L F I+S H P+ +V L + +ARA G GM GQ LDL G
Sbjct: 124 LAGDALLTLAFD-IISRDEIH--PDAKVRLLLTRALARASGIGGMVGGQMLDLAGEGRFG 180
Query: 204 --EPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEA 261
EP V +Q+ K G + + G L A + Q+L YGRA+G +Q+ DD+L+
Sbjct: 181 DREPVDVARLQQMKTGALLRFGCIAGALLGQASPQQYQALDDYGRALGEAFQIADDLLDV 240
Query: 262 KAQT-----PRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYG 310
+ P + K ++V G++ A +L A+A E L F G
Sbjct: 241 EGDAAALGKPAGADAALGK-TTFVTQLGIDGAKRRVRDLLARADEALSIFGDKG 293
>gi|46447330|ref|YP_008695.1| farnesyltranstransferase [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400971|emb|CAF24420.1| probable farnesyltranstransferase [Candidatus Protochlamydia
amoebophila UWE25]
Length = 294
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 141/271 (52%), Gaps = 15/271 (5%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVKY-PEQ-IYESMRYSVLAKGTKRAPPVMCVAACELF 97
D+ Y T I++ L++ ++ ++ P Q + E+ RY++L+ G KR P++ + +
Sbjct: 2 MDVANYLQTQSQLIEKRLDQLVSKRHGPHQNLIEAARYALLSGG-KRLRPILALTTVQTL 60
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
+ A AC LE++H SLIHDDLPCMD+D RRG+ + H Y A+L GD L
Sbjct: 61 HGDIQEALSPACTLELIHTYSLIHDDLPCMDNDDYRRGKLTVHRQYSEGHAVLTGDFLLT 120
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL--EGEP-NL--VEFVQ 212
F+ + T +L E +V ++I ++R G GM GQ LDL EG+ NL + +
Sbjct: 121 YAFELLA--TDKYLTSEKKV-KLITILSRQSGYDGMIGGQALDLASEGQKINLETLRLLH 177
Query: 213 EKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKK 272
K + S GG LA A ++++ +R +G +G+ +Q+ DDIL+ + + K
Sbjct: 178 RNKTAALITASVEFGGILANATEEQLAHIREFGENIGLAFQITDDILDITSSEAKHGRKI 237
Query: 273 K----KKGKSYVAFYGVEKAMEVAEELRAKA 299
K +YV+ G+E+A A KA
Sbjct: 238 GSDILKDKSTYVSLLGIEQAKAYALNFYQKA 268
>gi|304440276|ref|ZP_07400166.1| geranyltranstransferase [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371325|gb|EFM24941.1| geranyltranstransferase [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 289
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 99/287 (34%), Positives = 146/287 (50%), Gaps = 28/287 (9%)
Query: 46 WTTLITEIDQNLEKAI--TVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFG---VN 100
+ LI IDQNL I T + ++IYESM+YS L+ G KR P++ + + +F N
Sbjct: 6 YEELINIIDQNLYTNIPTTDDFQKKIYESMKYS-LSTGGKRVRPILALVSYSIFNDDSKN 64
Query: 101 RIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGF 160
P A ALE +H SLIHDDLP MD+D RRG+P+NH VY IAILAGD L L
Sbjct: 65 FSEIIPFAVALEYIHTYSLIHDDLPAMDNDDIRRGKPTNHKVYNEAIAILAGDGLLNLAA 124
Query: 161 QHIVSH----TPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLE---GEPNL--VEFV 211
+ + T P + R ++ I + G GM GQ +D++ E +L VE +
Sbjct: 125 EVVAKELEGITDP--IKLKRAIKSFRYIFSSSGIQGMVGGQTIDIDLSVDEMSLEEVETM 182
Query: 212 QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRD--- 268
+ K G + + G + GA +E+ S+ Y +G+ YQ+ DDIL+ + D
Sbjct: 183 YKLKTGALIKAPLAVGAIMGGATPEELISIEGYAEQLGLQYQIKDDILDYEDDLNSDVAT 242
Query: 269 -------EEKKKKKGKSYV-AFYGVEKAMEVAEELRAKAKEELDRFK 307
EE + K+Y A +E+ +EL+ A++ L+R K
Sbjct: 243 LSKLVSKEELESLLMKTYNKAINYLEEIDRNTDELKNIARDLLNRSK 289
>gi|154483652|ref|ZP_02026100.1| hypothetical protein EUBVEN_01356 [Eubacterium ventriosum ATCC
27560]
gi|149735562|gb|EDM51448.1| polyprenyl synthetase [Eubacterium ventriosum ATCC 27560]
Length = 296
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 125/242 (51%), Gaps = 15/242 (6%)
Query: 69 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMD 128
I E+M YS+ A G KR P++ + LFG + A+P A+EM+H SL+HDDLP MD
Sbjct: 33 IIEAMNYSLKA-GGKRLRPMLVLETLRLFGGDEKEAYPFMAAMEMIHTYSLVHDDLPAMD 91
Query: 129 DDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAV 188
+D RRG+ + H VYG DI ILAGD L + ++ + P+ R + +A
Sbjct: 92 NDMYRRGKKTTHAVYGEDIGILAGDGLLNMAYETMSMAILKSKYPQ-RAALAMNILAYKA 150
Query: 189 GSTGMAAGQFLDL-----EGEPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRR 243
G GM GQ +D+ E + + + F+ + K + E + + G LAG D+ ++++
Sbjct: 151 GIYGMIGGQTVDVINENKEKDIDTINFIHKLKTAALIEGAMMVGAILAGVDEQAVETVEE 210
Query: 244 YGRAVGVLYQVVDDILEAKAQTPR------DEEKKKKKGKSYVAFYGVEKAMEVAEELRA 297
VG+ +Q+ DDIL+ +EK K +YV G++++ + E+
Sbjct: 211 IATNVGIAFQIQDDILDVTGTLEELGKPVLSDEKNNK--TTYVTLKGIDESKRLVEDYSE 268
Query: 298 KA 299
KA
Sbjct: 269 KA 270
>gi|392960819|ref|ZP_10326284.1| Polyprenyl synthetase [Pelosinus fermentans DSM 17108]
gi|421054423|ref|ZP_15517391.1| Polyprenyl synthetase [Pelosinus fermentans B4]
gi|421057124|ref|ZP_15520014.1| Polyprenyl synthetase [Pelosinus fermentans B3]
gi|421067748|ref|ZP_15529192.1| Polyprenyl synthetase [Pelosinus fermentans A12]
gi|421071285|ref|ZP_15532405.1| Polyprenyl synthetase [Pelosinus fermentans A11]
gi|392440781|gb|EIW18441.1| Polyprenyl synthetase [Pelosinus fermentans B4]
gi|392447201|gb|EIW24455.1| Polyprenyl synthetase [Pelosinus fermentans A11]
gi|392448103|gb|EIW25307.1| Polyprenyl synthetase [Pelosinus fermentans A12]
gi|392454716|gb|EIW31538.1| Polyprenyl synthetase [Pelosinus fermentans DSM 17108]
gi|392463679|gb|EIW39578.1| Polyprenyl synthetase [Pelosinus fermentans B3]
Length = 292
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 94/257 (36%), Positives = 141/257 (54%), Gaps = 15/257 (5%)
Query: 65 YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDL 124
YP +I+E+MRYS+ A G KR P++ +AA + G AC LEM+H SLIHDDL
Sbjct: 27 YPPKIFEAMRYSLFAGG-KRLRPILLMAAADSIGGKGSDYLNVACGLEMIHTYSLIHDDL 85
Query: 125 PCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEI 184
P MDDD RRG+ ++H V+G +AILAGD L F +++ V +++VI EI
Sbjct: 86 PAMDDDDYRRGKLTSHKVFGEGMAILAGDGLLTAAFTVMLAQPG---VQADVLIKVIGEI 142
Query: 185 ARAVGSTGMAAGQFLDL--EGEP---NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQ 239
+ A G+ GM GQ +DL EGE + + ++ + K G + + + G LAG + +I
Sbjct: 143 SNAAGALGMIGGQVIDLSSEGEKIDIDTLSYMHQAKTGALFQAAVRAGAQLAGGAEWQIA 202
Query: 240 SLRRYGRAVGVLYQVVDDILEA-----KAQTPRDEEKKKKKGKSYVAFYGVEKAMEVAEE 294
SL Y + G+ +Q+ DDIL+ K P + K K +YV Y + KA ++A +
Sbjct: 203 SLTEYAKQYGLAFQITDDILDVTGTQEKIGKPVGSDVKNHK-ATYVTLYSLGKAQDMANQ 261
Query: 295 LRAKAKEELDRFKKYGD 311
A + L +F + D
Sbjct: 262 AVTNALQALKQFGQEAD 278
>gi|300854301|ref|YP_003779285.1| geranyltranstransferase [Clostridium ljungdahlii DSM 13528]
gi|300434416|gb|ADK14183.1| geranyltranstransferase [Clostridium ljungdahlii DSM 13528]
Length = 293
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 141/274 (51%), Gaps = 23/274 (8%)
Query: 40 FDLKTYWTTLITEIDQNLEKAITVK--YPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
++K TL E+++ L + K Y +++YE+M+YS+ A G KR P++ + +L+
Sbjct: 1 MEIKGVIETLREELNKYLYDYMEGKGSYNKRVYEAMQYSLDA-GGKRIRPLLFLLTYKLY 59
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF- 156
+ A A+EM+H SLIHDDLP MD+D RRG+P+NH V+G IA+LAGD L
Sbjct: 60 KTDCNEVMDIAAAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEAIAVLAGDGLLN 119
Query: 157 ---PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV----- 208
L F+H + + +R + I+ + G+ GM GQ +D+ E +
Sbjct: 120 EAMSLMFRHCIG-------KKDNAIRACSIISESAGADGMVGGQTVDILSENTKIPIDQL 172
Query: 209 EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRD 268
++ KK G + + S + AGA EI L YG +G+ +Q+ DDIL+ T
Sbjct: 173 YYMHSKKTGALIKGSIISAAVYAGASKAEIDKLSYYGEKLGLAFQIKDDILDLTGDTALL 232
Query: 269 EEKKK----KKGKSYVAFYGVEKAMEVAEELRAK 298
+ K ++++ YG+ K E+ + ++
Sbjct: 233 GKNIKSDLNNNKTTFISTYGINKCKEMCNSITSE 266
>gi|406878658|gb|EKD27503.1| hypothetical protein ACD_79C00693G0001, partial [uncultured
bacterium]
Length = 246
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 133/243 (54%), Gaps = 12/243 (4%)
Query: 87 PVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVD 146
P++C+ + ELF ACALE++H +LIHDDLPCMD+D RRG+P+ H +
Sbjct: 2 PILCLLSAELFAEPSQNVINCACALELLHTYTLIHDDLPCMDNDDFRRGKPTCHKAFPES 61
Query: 147 IAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGE-- 204
IA+LAGDAL L FQ I +T PE + +R+I+++A GS G+ GQ LD+ E
Sbjct: 62 IALLAGDALLTLCFQIIADNTKN--CPE-KGIRIISDLAELTGSKGVIGGQVLDIINENK 118
Query: 205 ---PNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEA 261
P + + K ++ S G L A + E++ + +YG +G +Q+ DDIL+
Sbjct: 119 PITPEELSEIHINKTAKLISASVRMGAILMNAAESELEMITKYGLLIGEAFQIADDILDE 178
Query: 262 ---KAQTPRDEEKKKKKGKS-YVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLY 317
A+ ++ + K KS + F+G++K+ ++ + A L++F K +++ +
Sbjct: 179 IGDSAKLGKNTGQDLKLNKSTFPKFFGIDKSKQILFDKINSAVACLNQFGKKAESLNQIA 238
Query: 318 SFI 320
FI
Sbjct: 239 HFI 241
>gi|258511741|ref|YP_003185175.1| polyprenyl synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257478467|gb|ACV58786.1| Polyprenyl synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 291
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 141/248 (56%), Gaps = 18/248 (7%)
Query: 68 QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCM 127
++ E+M YS++A G KR P + +A E FGV R P A A+E++H SLIHDDLPCM
Sbjct: 28 RLKEAMNYSLMADG-KRLRPALVIATAETFGVPRDRVLPAAAAVELIHCYSLIHDDLPCM 86
Query: 128 DDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARA 187
DDD RRGQP+NH V+G +A+LAGDAL F H+++ P VP R L +I +A
Sbjct: 87 DDDDLRRGQPTNHVVFGEAMALLAGDALLTEAF-HLLAR-PLEGVPAERQLAMIRTLASR 144
Query: 188 VGSTGMAAGQFLDLE---GEPNL--VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLR 242
G GM GQ +D+E G+ L VEF+ K + + GG+ A DD +L
Sbjct: 145 AGVDGMVGGQAVDIERTGGQGTLQDVEFIHLHKTARLIQACVEIGGYFADLDDQVRWALS 204
Query: 243 RYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK-------SYVAFYGVEKAMEVAEEL 295
YG +G+ +Q++DD+L+ A T E+ K GK +Y F GVEK ++A ++
Sbjct: 205 CYGECLGLAFQMIDDVLDVTAST---EQLGKTAGKDVEEGKLTYPRFVGVEKTRQMARDV 261
Query: 296 RAKAKEEL 303
+ ++ L
Sbjct: 262 IRRGEQAL 269
>gi|260220841|emb|CBA28811.1| Probable geranyltranstransferase [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 341
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 160/312 (51%), Gaps = 40/312 (12%)
Query: 23 RCSSL---PVSAASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQI--------YE 71
RC+ P+S A+ + + F+L T+ + +++ LE IT P+ + +
Sbjct: 18 RCAETLESPMSQAADM-TVDFELDTWMRERLDRVERALEAWITADAPQGVDHGAPAALVD 76
Query: 72 SMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTAC---------ALEMVHAASLIHD 122
+MRY+VL G KR P++ +AA E +A C A+E++HA SL+HD
Sbjct: 77 AMRYAVL-DGGKRLRPLLVLAAHE-----AVAELGHGCDAAALRAACAVELIHAYSLVHD 130
Query: 123 DLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTP-PHLVPEPRVLRVI 181
D+PCMD+D RRG+P+ H +G A+LAGDAL L F+ + TP VP R+
Sbjct: 131 DMPCMDNDVLRRGKPTVHVQFGEASALLAGDALQALAFEFL---TPLDGSVPCTVQARLC 187
Query: 182 AEIARAVGSTGMAAGQFLDLE--GEP---NLVEFVQEKKFGEMSECSAVCGGFLAGADDD 236
+ARA GS+GMA GQ +DL G P N + + + K G + + S V G A
Sbjct: 188 GLLARAAGSSGMAGGQAIDLASVGLPLTENQLREMHQLKTGALLQGSVVMGAQCAQPTAQ 247
Query: 237 EIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKGK----SYVAFYGVEKAMEVA 292
+ L YG A+G+ +QVVDDIL+ A + + K +YV+ G++ + + A
Sbjct: 248 VLSGLEAYGAAIGLAFQVVDDILDVTADSATLGKTAGKDADNDKPTYVSLMGLQASRDYA 307
Query: 293 EELRAKAKEELD 304
L +A + LD
Sbjct: 308 LSLYTQALDALD 319
>gi|90422021|ref|YP_530391.1| polyprenyl synthetase [Rhodopseudomonas palustris BisB18]
gi|90104035|gb|ABD86072.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisB18]
Length = 308
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 108/310 (34%), Positives = 155/310 (50%), Gaps = 22/310 (7%)
Query: 25 SSLPVSA--ASQLRSTQFDLKTYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGT 82
S+L +SA +L T D + L++ DQ L I P ++ E++RYS LA G
Sbjct: 2 STLTLSADFVQRLDQTADDTEALLARLLS--DQLLPDEIA--RPRRLMEAIRYSSLAGG- 56
Query: 83 KRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTV 142
KR P + V + +FGV R AA ALE +H SLIHDDLP MD+ RRG+P+ H
Sbjct: 57 KRLRPFLVVESAAVFGVPRGAALLAGAALECIHCYSLIHDDLPAMDNSELRRGRPTLHRA 116
Query: 143 YGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLE 202
Y AILAGDAL L F I++ H R L + +ARA G GM GQ LDL
Sbjct: 117 YDDATAILAGDALLTLAFD-IITRDEIHSDAGVR-LALTRALARASGIGGMVGGQMLDLA 174
Query: 203 G-------EPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVV 255
G EP V +Q+ K G + + G L A ++ ++L YGRA+G +Q+
Sbjct: 175 GEGRFGDREPVDVARLQQMKTGALLRFGCIAGAILGQATKEQTKALDDYGRALGEAFQIA 234
Query: 256 DDILEAKAQT-----PRDEEKKKKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYG 310
DD+L+ + P + K ++V G++ A + +L A+A + L F + G
Sbjct: 235 DDLLDVEGDAAALGKPAGADAALNK-TTFVTQLGIDGAKKRVRDLLARADKALLIFGEKG 293
Query: 311 DNVLPLYSFI 320
D + F+
Sbjct: 294 DVLRAAARFV 303
>gi|167634585|ref|ZP_02392905.1| geranyltranstransferase [Bacillus anthracis str. A0442]
gi|254741328|ref|ZP_05199015.1| geranyltranstransferase [Bacillus anthracis str. Kruger B]
gi|167530037|gb|EDR92772.1| geranyltranstransferase [Bacillus anthracis str. A0442]
Length = 296
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 149/267 (55%), Gaps = 17/267 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P + E+M YS L G KR P++ A + F R ACALEM+H SL+HDDLP
Sbjct: 30 PNVLREAMAYS-LEAGGKRLRPLLLFATLQAFDKERNLGVGAACALEMIHTYSLVHDDLP 88
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+NH V+G +A+LAGD L FQ I+++ + E +V R++ E+A
Sbjct: 89 CMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYRQKEISAEKKV-RLVLELA 147
Query: 186 RAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS 240
+A G GM GQ D+E E + +E++ + K G++ E + + G L+ A +++ +
Sbjct: 148 KAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEEK 207
Query: 241 LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG-------KSYVAFYGVEKAMEVAE 293
L + + +G+ +Q+ DDIL+ + +EE K G +Y + V++A ++ +
Sbjct: 208 LLEFAKYIGLAFQIRDDILDVEGT---EEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILD 264
Query: 294 ELRAKAKEELDRFKKYGDNVLPLYSFI 320
E AKAK+ + + + +L + I
Sbjct: 265 ETIAKAKDAIGSLQLQDEYLLSICDLI 291
>gi|6466227|gb|AAF12843.1|AF203881_16 geranyltransferase [Zymomonas mobilis subsp. mobilis ZM4]
Length = 298
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 152/295 (51%), Gaps = 20/295 (6%)
Query: 41 DLKTYWTTLITEIDQNLEKAITVKYPE----QIYESMRYSVLAKGTKRAPPVMCVAACEL 96
+LKT + +ID+ + + V PE ++ E+MRY+ + G KR P++ VA C L
Sbjct: 4 NLKTMMEQVAQDIDRLFAEQLPV--PEDPRRRLVEAMRYAAIG-GGKRLRPLLVVATCAL 60
Query: 97 FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALF 156
F V+R AA A+E +H SLIHDD+PCMD+D RRG+P+ H + A+L+GDAL
Sbjct: 61 FNVDREAALRVGMAIECIHVYSLIHDDMPCMDNDDLRRGKPTVHKAFDDASAVLSGDALQ 120
Query: 157 PLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEF------ 210
L F+ I+S H P R+ + A ++ V GM GQ +DL E + V F
Sbjct: 121 ALAFE-ILSEEKIHTDPHVRLELIQALLSPPV-KDGMVGGQAIDLAAETSTVPFDLPTIT 178
Query: 211 -VQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEA---KAQTP 266
+Q+ K G + G + + D L+ Y R +G+ +Q+ DD+++A +A
Sbjct: 179 RLQQLKTGALFGFCLEAGAIMGRQNKDIRDRLKAYARDIGLAFQIADDLIDAEGDEAVAG 238
Query: 267 RDEEKKKKKGK-SYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+ K GK ++++ G+EKA A+ L +A L F D + + +I
Sbjct: 239 KAVGKDAAAGKATFLSLLGLEKARSQAQALVDQAIAHLSVFGSEADYLRSIARYI 293
>gi|269103247|ref|ZP_06155944.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase
[Photobacterium damselae subsp. damselae CIP 102761]
gi|268163145|gb|EEZ41641.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase
[Photobacterium damselae subsp. damselae CIP 102761]
Length = 299
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 97/274 (35%), Positives = 137/274 (50%), Gaps = 30/274 (10%)
Query: 44 TYWTTLITEIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIA 103
T+W DQ L KA M+Y L G KR P + + GVN
Sbjct: 22 THWLDAQPFADQTLLKA------------MKYGALLGG-KRVRPFLTYVTGNMLGVNEEN 68
Query: 104 AFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHI 163
A A+E +HA SLIHDDLP MDDD RRGQP+ H + A+LAGDAL L F+ I
Sbjct: 69 LDTPAAAIECIHAYSLIHDDLPAMDDDELRRGQPTCHIAFDEATAVLAGDALQTLAFE-I 127
Query: 164 VSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGE 218
++ + E + +++I E+A+A G+ GM GQ LDL+GE +E + + K G
Sbjct: 128 LAEGTLSIDGESQRIKMIKELAQASGAAGMCMGQALDLDGEGKHLGLTQLEQIHKHKTGA 187
Query: 219 MSECSAVCGGFLAGADDDEIQ-SLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKKKKKG- 276
+ C+ G AG EI L Y A+G+ +QV DDIL+ + T E K +G
Sbjct: 188 LIRCAVRLGALAAGEKGLEILPQLNTYAEAIGLAFQVQDDILDVISDT---ETLGKPQGS 244
Query: 277 ------KSYVAFYGVEKAMEVAEELRAKAKEELD 304
+Y A G+E A + A++L +A + L+
Sbjct: 245 DIALDKSTYPALLGLEGAQQKAQQLYQEAVQALE 278
>gi|392419665|ref|YP_006456269.1| geranyltranstransferase [Pseudomonas stutzeri CCUG 29243]
gi|390981853|gb|AFM31846.1| geranyltranstransferase [Pseudomonas stutzeri CCUG 29243]
Length = 295
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 104/290 (35%), Positives = 151/290 (52%), Gaps = 18/290 (6%)
Query: 45 YWTTLITEIDQNLEKAITVKYP--EQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRI 102
Y +D LE P E++Y++MRYSV+ G KR P++ AACE ++
Sbjct: 5 YQKRCQQRVDGCLETLFVPPLPQLERLYQAMRYSVM-NGGKRVRPLLVYAACEALNGDKT 63
Query: 103 AAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQH 162
+A ACA+E++HA SL+HDDLP MDDD RRGQP+ H + AILAGD L L F+
Sbjct: 64 SADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEA 123
Query: 163 IV--SHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEG-----EPNLVEFVQEKK 215
+ +H P LR+ A +ARA G GM GQ +DL + + +E + K
Sbjct: 124 MAQAAHNPQDATLR---LRMFAVLARAAGPAGMVGGQAIDLGSVGLKLDRDALELMHRHK 180
Query: 216 FGEMSECSAVCGGFLAG-ADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKK-- 272
G + E S G +G AD D + SL +Y RA+G+ +QV DDIL+ ++ T + +
Sbjct: 181 TGALIEASVQLGALASGHADADNLASLSQYARAIGLAFQVQDDILDVESDTATLGKHQGA 240
Query: 273 --KKKGKSYVAFYGVEKAMEVAEELRAKAKEELDRFKKYGDNVLPLYSFI 320
+ +Y A G++ A A ELR +A L F + + L +I
Sbjct: 241 DIARDKPTYPALLGMDAAKAYALELRDQALHALRPFDISAEPLRELARYI 290
>gi|403238230|ref|ZP_10916816.1| polyprenyl synthetase [Bacillus sp. 10403023]
Length = 297
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 133/228 (58%), Gaps = 8/228 (3%)
Query: 39 QFDLKTYWTTLITEIDQNLEKAIT-VKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELF 97
Q +++ + + +I++ L K I+ + P+ I +SM YS L G KR P++ + F
Sbjct: 3 QSEVEQFLSFQKNKIEEQLPKYISKLSAPKIIKDSMDYS-LEAGGKRIRPLLLLGTLHSF 61
Query: 98 GVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFP 157
G + TACA+EM+H SLIHDDLP MDDD RRG+P+NH V+G IA+LAGD L
Sbjct: 62 GKDENIGLSTACAIEMIHTYSLIHDDLPSMDDDDLRRGKPTNHKVFGEAIAVLAGDGLLT 121
Query: 158 LGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP---NL--VEFVQ 212
FQ + + PE ++L +I E+A+A G GM GQ D+EGE NL +E++
Sbjct: 122 YSFQLVSESVGNTISPEKKLL-LITELAKAAGPEGMVGGQVADMEGEGAVLNLDELEYIH 180
Query: 213 EKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILE 260
K G++ S + G LA A +++ L ++ +G+ +Q+ DDIL+
Sbjct: 181 RHKTGKLLAYSVIAGAILADATSEQLDKLTQFAHHLGLAFQIRDDILD 228
>gi|323529243|ref|YP_004231395.1| polyprenyl synthetase [Burkholderia sp. CCGE1001]
gi|323386245|gb|ADX58335.1| Polyprenyl synthetase [Burkholderia sp. CCGE1001]
Length = 293
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 99/266 (37%), Positives = 141/266 (53%), Gaps = 17/266 (6%)
Query: 66 PEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLP 125
P +++E++RY+VL G KR P++C AA EL G A ALEM+H SL+HDD+P
Sbjct: 29 PAKLHEAVRYAVLGGG-KRVRPLLCHAAGELTGARAECLDAAAAALEMIHVYSLVHDDMP 87
Query: 126 CMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIA 185
CMDDD RRG+P+ H Y A+L GDAL F V+ T L P + ++ E+A
Sbjct: 88 CMDDDALRRGKPTVHVKYDEATALLVGDALQSQAF---VALTSDVLAPAQQA-ALVRELA 143
Query: 186 RAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCGGFLAGA--DDDEI 238
A GS GM GQ +DL + +E + K G + +AV G LAG D + +
Sbjct: 144 LASGSIGMCGGQAIDLASVGHTLTREQLETMHRMKTGALLR-AAVRMGALAGEAPDANAM 202
Query: 239 QSLRRYGRAVGVLYQVVDDILEA---KAQTPRDEEKKKKKGK-SYVAFYGVEKAMEVAEE 294
+SL Y AVG+ +QVVDDIL+ A + K K GK +YV+ G++ + +A +
Sbjct: 203 RSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGKDAKDGKPTYVSIIGLDASRALAAQ 262
Query: 295 LRAKAKEELDRFKKYGDNVLPLYSFI 320
LR+ A L F + L +
Sbjct: 263 LRSDAHAALAPFGARAQRLAELADLV 288
>gi|320546351|ref|ZP_08040668.1| geranyltranstransferase [Streptococcus equinus ATCC 9812]
gi|320449005|gb|EFW89731.1| geranyltranstransferase [Streptococcus equinus ATCC 9812]
Length = 289
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 132/238 (55%), Gaps = 19/238 (7%)
Query: 69 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRI-AAFPTACALEMVHAASLIHDDLPCM 127
+ E++ YSV G KR P++ + E FGV A + A ALEM+H SLIHDDLP M
Sbjct: 25 LIEAILYSV-DGGGKRVRPLIFLELLEGFGVALTDAHYDVAAALEMIHTGSLIHDDLPAM 83
Query: 128 DDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARA 187
D+D RRG+ +NH + AILAGD+LF + + + L E +V +IAE+A A
Sbjct: 84 DNDDYRRGRLTNHKKFNEATAILAGDSLFLDPYDLVAN---AELSAEVKV-ALIAELAHA 139
Query: 188 VGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLR 242
G+ GM GQ LD+EGE + ++ + K G++ V G +AG ++I +LR
Sbjct: 140 SGTYGMVGGQMLDMEGEERKLSLSELQLIHANKTGKLLTFPVVAAGIVAGLAGEDINNLR 199
Query: 243 RYGRAVGVLYQVVDDILEAKA------QTPRDEEKKKKKGKSYVAFYGVEKAMEVAEE 294
+ G +G+ +QV DDIL+ A +TP+ + K +Y + G+EK+ ++ E
Sbjct: 200 KAGSLIGLAFQVRDDILDVTASFEEIGKTPKKDLLADK--ATYPSLLGLEKSYDILNE 255
>gi|81428294|ref|YP_395294.1| farnesyl-diphosphate synthase [Lactobacillus sakei subsp. sakei
23K]
gi|78609936|emb|CAI54983.1| Farnesyl-diphosphate synthase [Lactobacillus sakei subsp. sakei
23K]
Length = 290
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 141/267 (52%), Gaps = 23/267 (8%)
Query: 69 IYESMRYSVLAKGTKRAPPVMCVAACELFGVN-RIAAFPTACALEMVHAASLIHDDLPCM 127
+ +SM YSV+A G KR P++ A E G + AF A ALE++H+ SLIHDDLP M
Sbjct: 31 LQKSMTYSVMAGG-KRLRPLLLFAVLESTGQSIDETAFRAAGALELIHSYSLIHDDLPAM 89
Query: 128 DDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARA 187
D+D RRGQP+NH V+G AILAGD L L F+ + + ++ E R+ ++ +A+A
Sbjct: 90 DNDDLRRGQPTNHKVFGEAEAILAGDGLLTLAFEWLAT---LNVTAEQRI-ELVRLLAQA 145
Query: 188 VGSTGMAAGQFLDLEGEPNLVEFVQEK-----KFGEMSECSAVCGGFLAGADDDEIQSLR 242
G+ GM AGQ D+EGE + Q + K G + E + G LA + E +LR
Sbjct: 146 AGANGMVAGQIEDIEGEHKTLTLAQLQQVHHLKTGCLIEVAVAMGAVLAQLGEVETTALR 205
Query: 243 RYGRAVGVLYQVVDDILEAKAQTP-------RDEEKKKKKGKSYVAFYGVEKAMEVAEEL 295
+ + G+ +Q+ DDIL+ + T +D ++K + G ++A+ +
Sbjct: 206 GFAQQFGLAFQIQDDILDVTSTTAEMGKAVHKDAAEQKNTFPILLGMSGAQEALHTTCQQ 265
Query: 296 RAKAKEELDRFKKYGDNVLPLYSFIDY 322
+ ++ F D L L SF+DY
Sbjct: 266 AQQQLAQVTTF----DRTL-LNSFLDY 287
>gi|399053798|ref|ZP_10742597.1| geranylgeranyl pyrophosphate synthase [Brevibacillus sp. CF112]
gi|433542484|ref|ZP_20498911.1| geranyltranstransferase [Brevibacillus agri BAB-2500]
gi|398048575|gb|EJL41047.1| geranylgeranyl pyrophosphate synthase [Brevibacillus sp. CF112]
gi|432186295|gb|ELK43769.1| geranyltranstransferase [Brevibacillus agri BAB-2500]
Length = 297
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 90/228 (39%), Positives = 132/228 (57%), Gaps = 8/228 (3%)
Query: 43 KTYWTTLITEIDQNLEKAITVK-YPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNR 101
+ Y + I+Q+L A+ + P Q+YESM+YS++A G KR P++ +A E
Sbjct: 5 QQYLAEKTSYIEQHLLPALEQQGVPTQLYESMKYSLMAGG-KRLRPMLVLAVLEALDKPM 63
Query: 102 IAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQ 161
P A ALEM+H SLIHDDLP MDDD RRG+P+NH V+G AILAGDAL F
Sbjct: 64 ERGVPFAVALEMIHTYSLIHDDLPAMDDDDLRRGKPANHKVFGEATAILAGDALLTRAFA 123
Query: 162 HIV-SHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPN-----LVEFVQEKK 215
+I ++ V +++IAE+ + G+TGM GQ D+EGE +EF+ K
Sbjct: 124 YIAEAYQERSDVAPITTVKLIAELGKRAGATGMVGGQMADIEGEGKQLDLEQLEFIHRHK 183
Query: 216 FGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKA 263
G++ + GG+LA A + ++ +L RYG +G+ +Q+ DDIL +
Sbjct: 184 TGDLLVAALRGGGYLAEASEAQMDALTRYGVCIGLAFQIQDDILNVEG 231
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.136 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,251,739,927
Number of Sequences: 23463169
Number of extensions: 222285879
Number of successful extensions: 681956
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5317
Number of HSP's successfully gapped in prelim test: 3923
Number of HSP's that attempted gapping in prelim test: 657525
Number of HSP's gapped (non-prelim): 9951
length of query: 334
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 191
effective length of database: 9,003,962,200
effective search space: 1719756780200
effective search space used: 1719756780200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 77 (34.3 bits)